BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037084
(532 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 159/296 (53%), Gaps = 21/296 (7%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
D+ ++ I+G G G VYK + + G ++A+K++ + EL Q
Sbjct: 38 DNFSNKNILGRGGFGKVYKGRL--ADGTLVAVKRLKEERXQGGEL-------------QF 82
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
++E+ HRNLL L+ P LLVY +M NGS+ L + + + LDW R
Sbjct: 83 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ 142
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM--PDGHTRIR 413
RIA G A GL YLH + P IIHRD+K AN+L+D+ EA + DFGLAKLM D H
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHV--- 199
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD-DFFQYTEEMNMVRW 472
V GT G++APEY T SEK+D++ +GV+L L+ G+ FD +++ ++ W
Sbjct: 200 XXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 259
Query: 473 MRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCMLS 528
++ ++ + +D L GN +E++ ++++A CT P ERP +V ML
Sbjct: 260 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 157/296 (53%), Gaps = 21/296 (7%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
D+ + I+G G G VYK + + G ++A+K++ + EL Q
Sbjct: 30 DNFXNKNILGRGGFGKVYKGRL--ADGXLVAVKRLKEERTQGGEL-------------QF 74
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
++E+ HRNLL L+ P LLVY +M NGS+ L + + + LDW R
Sbjct: 75 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ 134
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM--PDGHTRIR 413
RIA G A GL YLH + P IIHRD+K AN+L+D+ EA + DFGLAKLM D H
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHV--- 191
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD-DFFQYTEEMNMVRW 472
V G G++APEY T SEK+D++ +GV+L L+ G+ FD +++ ++ W
Sbjct: 192 XXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251
Query: 473 MRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCMLS 528
++ ++ + +D L GN +E++ ++++A CT P ERP +V ML
Sbjct: 252 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 110/210 (52%), Gaps = 18/210 (8%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G GVVYK V + +A+KK+ TE L +Q EI
Sbjct: 39 MGEGGFGVVYKGYVNNT---TVAVKKLAAMVDITTEELK----------QQFDQEIKVMA 85
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
+ H NL+ L + D LVY +M NGSL D L G L W R +IA+G A+
Sbjct: 86 KCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAAN 144
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ +LH H IHRDIK AN+L+D+ A+ISDFGLA+ + + + GTT Y
Sbjct: 145 GINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAY 201
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVVG 453
+APE + I+ KSDIYSFGV+L ++ G
Sbjct: 202 MAPEALRG-EITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 109/210 (51%), Gaps = 18/210 (8%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G GVVYK V + +A+KK+ TE L +Q EI
Sbjct: 39 MGEGGFGVVYKGYVNNT---TVAVKKLAAMVDITTEELK----------QQFDQEIKVMA 85
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
+ H NL+ L + D LVY +M NGSL D L G L W R +IA+G A+
Sbjct: 86 KCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAAN 144
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ +LH H IHRDIK AN+L+D+ A+ISDFGLA+ + + GTT Y
Sbjct: 145 GINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAY 201
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVVG 453
+APE + I+ KSDIYSFGV+L ++ G
Sbjct: 202 MAPEALRG-EITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 109/210 (51%), Gaps = 18/210 (8%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G GVVYK V + +A+KK+ TE L +Q EI
Sbjct: 33 MGEGGFGVVYKGYVNNT---TVAVKKLAAMVDITTEELK----------QQFDQEIKVMA 79
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
+ H NL+ L + D LVY +M NGSL D L G L W R +IA+G A+
Sbjct: 80 KCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQGAAN 138
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ +LH H IHRDIK AN+L+D+ A+ISDFGLA+ + + GTT Y
Sbjct: 139 GINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAY 195
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVVG 453
+APE + I+ KSDIYSFGV+L ++ G
Sbjct: 196 MAPEALRG-EITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 107/209 (51%), Gaps = 18/209 (8%)
Query: 245 GVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGR 304
G G GVVYK V + +A+KK+ TE L +Q EI +
Sbjct: 31 GEGGFGVVYKGYVNNT---TVAVKKLAAMVDITTEELK----------QQFDQEIKVXAK 77
Query: 305 IWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASG 364
H NL+ L + D LVY + NGSL D L G L W R +IA+G A+G
Sbjct: 78 CQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL-SCLDGTPPLSWHXRCKIAQGAANG 136
Query: 365 LEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYV 424
+ +LH H IHRDIK AN+L+D+ A+ISDFGLA+ + + + GTT Y
Sbjct: 137 INFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYX 193
Query: 425 APEYHQTLTISEKSDIYSFGVLLAVLVVG 453
APE + I+ KSDIYSFGV+L ++ G
Sbjct: 194 APEALRG-EITPKSDIYSFGVVLLEIITG 221
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
Query: 307 HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLE 366
H +L+ L + +L+Y++M+NG+L+ L+ + W R I G A GL
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 367 YLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD-GHTRIRITTVAGTTGYVA 425
YLH IIHRD+K N+L+D+ +I+DFG++K + G T + V GT GY+
Sbjct: 154 YLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLX-XVVKGTLGYID 209
Query: 426 PEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRA 485
PEY ++EKSD+YSFGV+L ++ + E +N+ W ++ +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP-REMVNLAEWAVESHNNGQLEQI 268
Query: 486 IDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
+D L E +R A C + E+RPS DV
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 4/217 (1%)
Query: 307 HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLE 366
H +L+ L + +L+Y++M+NG+L+ L+ + W R I G A GL
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 367 YLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAP 426
YLH IIHRD+K N+L+D+ +I+DFG++K + V GT GY+ P
Sbjct: 154 YLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDP 210
Query: 427 EYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAI 486
EY ++EKSD+YSFGV+L ++ + E +N+ W ++ + +
Sbjct: 211 EYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP-REMVNLAEWAVESHNNGQLEQIV 269
Query: 487 DSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
D L E +R A C + E+RPS DV
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 114/219 (52%), Gaps = 19/219 (8%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E IG G+ G V++AE +G +A+K + + A +N +R E+
Sbjct: 43 EKIGAGSFGTVHRAEW---HGSDVAVKILMEQDFHAER--------VNEFLR----EVAI 87
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
R+ H N++ VT+P +V E++ GSL +LH S R +LD R +A +
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDV 146
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTT 421
A G+ YLH P I+HR++K N+L+D ++ DFGL++L T + + AGT
Sbjct: 147 AKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTP 203
Query: 422 GYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDF 460
++APE + +EKSD+YSFGV+L L + P+ +
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL 242
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 112/219 (51%), Gaps = 19/219 (8%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E IG G+ G V++AE +G +A+K + + A +N +R E+
Sbjct: 43 EKIGAGSFGTVHRAEW---HGSDVAVKILMEQDFHAER--------VNEFLR----EVAI 87
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
R+ H N++ VT+P +V E++ GSL +LH S R +LD R +A +
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDV 146
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTT 421
A G+ YLH P I+HRD+K N+L+D ++ DFGL++L + AGT
Sbjct: 147 AKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTP 203
Query: 422 GYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDF 460
++APE + +EKSD+YSFGV+L L + P+ +
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL 242
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 11/202 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++GK+ K A ++LN +++ + +I+ EI H +++ L ++
Sbjct: 27 GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS 86
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
P +V E++ G L D + GR LD R+ + + SG++Y H R ++H
Sbjct: 87 TPSDIFMVMEYVSGGELFDYI--CKNGR--LDEKESRRLFQQILSGVDYCH---RHMVVH 139
Query: 379 RDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEY-HQTLTISEK 437
RD+KP NVL+D M A+I+DFGL+ +M DG + G+ Y APE L +
Sbjct: 140 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRXSCGSPNYAAPEVISGRLYAGPE 196
Query: 438 SDIYSFGVLLAVLVVGKFPFDD 459
DI+S GV+L L+ G PFDD
Sbjct: 197 VDIWSSGVILYALLCGTLPFDD 218
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 11/202 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++GK+ + A ++LN +++ + +IK EI H +++ L ++
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS 81
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
P +V E++ G L D + GR E + AR R+ + + S ++Y H R ++H
Sbjct: 82 TPTDFFMVMEYVSGGELFDYI--CKHGRVE-EMEAR-RLFQQILSAVDYCH---RHMVVH 134
Query: 379 RDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEY-HQTLTISEK 437
RD+KP NVL+D M A+I+DFGL+ +M DG + T G+ Y APE L +
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAPEVISGRLYAGPE 191
Query: 438 SDIYSFGVLLAVLVVGKFPFDD 459
DI+S GV+L L+ G PFDD
Sbjct: 192 VDIWSCGVILYALLCGTLPFDD 213
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 135/296 (45%), Gaps = 55/296 (18%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E++G GA GVV KA+ K +AIK+I E + R+ I ++RQ+
Sbjct: 15 EVVGRGAFGVVCKAKW---RAKDVAIKQI--------ESESERKAFI-VELRQLS----- 57
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
R+ H N++ L P C LV E+ + GSL ++LH L Y A M
Sbjct: 58 --RVNHPNIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEP-------LPYYTAAHAM 106
Query: 362 A------SGLEYLHMYHRPCIIHRDIKPANVL-IDDGMEARISDFGLAKLMPDGHTRIRI 414
+ G+ YLH +IHRD+KP N+L + G +I DFG A + +
Sbjct: 107 SWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHM 161
Query: 415 TTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T G+ ++APE + SEK D++S+G++L ++ + PFD+ R M
Sbjct: 162 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG-----PAFRIMW 216
Query: 475 NVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCMLSQI 530
V H L+ N + L+ + C S DP +RPS +++ +++ +
Sbjct: 217 AV------HNGTRPPLIKNLPKPIESLMTR----CWSKDPSQRPSMEEIVKIMTHL 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 135/296 (45%), Gaps = 55/296 (18%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E++G GA GVV KA+ K +AIK+I E + R+ I ++RQ+
Sbjct: 14 EVVGRGAFGVVCKAKW---RAKDVAIKQI--------ESESERKAFI-VELRQLS----- 56
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
R+ H N++ L P C LV E+ + GSL ++LH L Y A M
Sbjct: 57 --RVNHPNIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEP-------LPYYTAAHAM 105
Query: 362 A------SGLEYLHMYHRPCIIHRDIKPANVL-IDDGMEARISDFGLAKLMPDGHTRIRI 414
+ G+ YLH +IHRD+KP N+L + G +I DFG A + +
Sbjct: 106 SWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHM 160
Query: 415 TTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T G+ ++APE + SEK D++S+G++L ++ + PFD+ R M
Sbjct: 161 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG-----PAFRIMW 215
Query: 475 NVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCMLSQI 530
V H L+ N + L+ + C S DP +RPS +++ +++ +
Sbjct: 216 AV------HNGTRPPLIKNLPKPIESLMTR----CWSKDPSQRPSMEEIVKIMTHL 261
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 11/202 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++GK+ + A ++LN +++ + +IK EI H +++ L ++
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS 81
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
P +V E++ G L D + GR E + AR R+ + + S ++Y H R ++H
Sbjct: 82 TPTDFFMVMEYVSGGELFDYI--CKHGRVE-EMEAR-RLFQQILSAVDYCH---RHMVVH 134
Query: 379 RDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEY-HQTLTISEK 437
RD+KP NVL+D M A+I+DFGL+ +M DG + G+ Y APE L +
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRDSCGSPNYAAPEVISGRLYAGPE 191
Query: 438 SDIYSFGVLLAVLVVGKFPFDD 459
DI+S GV+L L+ G PFDD
Sbjct: 192 VDIWSCGVILYALLCGTLPFDD 213
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 136/299 (45%), Gaps = 42/299 (14%)
Query: 230 AFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLIN 289
A+ ++L +E +G G G V+ G +A+K + Q M+ L +
Sbjct: 7 AWEVPRETLKLVERLGAGQAGEVWMGYYNGH--TKVAVKSLKQGSMSPDAFLAEANL--- 61
Query: 290 RKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRREL 349
M+Q++ H+ L+ L A VT+ +++ E+M+NGSL D L S + +
Sbjct: 62 --MKQLQ----------HQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTI 108
Query: 350 DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGH 409
+ L +A +A G+ ++ + IHRD++ AN+L+ D + +I+DFGLA+L+ D
Sbjct: 109 NKL--LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAE 163
Query: 410 TRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMN 468
R + APE T + KSD++SFG+LL +V G+ P+ N
Sbjct: 164 XTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 222
Query: 469 MVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
+ R R V P + MRL C + PE+RP+ +R +L
Sbjct: 223 LERGYRMVRPDNCPEELY----------QLMRL-------CWKERPEDRPTFDYLRSVL 264
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 109/205 (53%), Gaps = 14/205 (6%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR-QIKSEIITAGRIWHRNLLPLQAHV 317
GS+GK+ A + ++ R++L M +++ EI + H +++ L +
Sbjct: 20 GSFGKVKLATHYKTQQKVALKFIS-RQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVI 78
Query: 318 TRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCII 377
T P ++V E+ G L D + V + R D R+ + + +EY H R I+
Sbjct: 79 TTPTDIVMVIEY-AGGELFDYI--VEKKRMTEDEGRRF--FQQIICAIEYCH---RHKIV 130
Query: 378 HRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEY-HQTLTISE 436
HRD+KP N+L+DD + +I+DFGL+ +M DG+ + T G+ Y APE + L
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVINGKLYAGP 187
Query: 437 KSDIYSFGVLLAVLVVGKFPFDDFF 461
+ D++S G++L V++VG+ PFDD F
Sbjct: 188 EVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 42/293 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++L +E +G G G V+ G +A+K + Q M+ L + M+Q+
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGH--TKVAVKSLKQGSMSPDAFLAEANL-----MKQL 65
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
+ H+ L+ L A VT+ +++ E+M+NGSL D L S + ++ L
Sbjct: 66 Q----------HQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL--L 112
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+A +A G+ ++ + IHRD++ AN+L+ D + +I+DFGLA+L+ D R
Sbjct: 113 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-E 168
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMR 474
+ APE T + KSD++SFG+LL +V G+ P+ N+ R R
Sbjct: 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 228
Query: 475 NVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
V P + MRL C + PE+RP+ +R +L
Sbjct: 229 MVRPDNCPEELY----------QLMRL-------CWKERPEDRPTFDYLRSVL 264
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 42/293 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++L +E +G G G V+ G +A+K + Q M+ L + M+Q+
Sbjct: 14 ETLKLVERLGAGQFGEVWMGYYNGH--TKVAVKSLKQGSMSPDAFLAEANL-----MKQL 66
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
+ H+ L+ L A VT+ +++ E+M+NGSL D L S + ++ L
Sbjct: 67 Q----------HQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL--L 113
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+A +A G+ ++ + IHRD++ AN+L+ D + +I+DFGLA+L+ D R
Sbjct: 114 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-E 169
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMR 474
+ APE T + KSD++SFG+LL +V G+ P+ N+ R R
Sbjct: 170 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 229
Query: 475 NVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
V P + MRL C + PE+RP+ +R +L
Sbjct: 230 MVRPDNCPEELY----------QLMRL-------CWKERPEDRPTFDYLRSVL 265
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 42/293 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++L +E +G G G V+ G +A+K + Q M+ L + M+Q+
Sbjct: 15 ETLKLVERLGAGQFGEVWMGYYNGH--TKVAVKSLKQGSMSPDAFLAEANL-----MKQL 67
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
+ H+ L+ L A VT+ +++ E+M+NGSL D L S + ++ L
Sbjct: 68 Q----------HQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL--L 114
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+A +A G+ ++ + IHRD++ AN+L+ D + +I+DFGLA+L+ D R
Sbjct: 115 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-E 170
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMR 474
+ APE T + KSD++SFG+LL +V G+ P+ N+ R R
Sbjct: 171 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 230
Query: 475 NVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
V P + MRL C + PE+RP+ +R +L
Sbjct: 231 MVRPDNCPEELY----------QLMRL-------CWKERPEDRPTFDYLRSVL 266
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 42/293 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++L +E +G G G V+ G +A+K + Q M+ L + M+Q+
Sbjct: 21 ETLKLVERLGAGQFGEVWMGYYNGH--TKVAVKSLKQGSMSPDAFLAEANL-----MKQL 73
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
+ H+ L+ L A VT+ +++ E+M+NGSL D L S + ++ L
Sbjct: 74 Q----------HQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL--L 120
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+A +A G+ ++ + IHRD++ AN+L+ D + +I+DFGLA+L+ D R
Sbjct: 121 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-E 176
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMR 474
+ APE T + KSD++SFG+LL +V G+ P+ N+ R R
Sbjct: 177 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 236
Query: 475 NVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
V P + MRL C + PE+RP+ +R +L
Sbjct: 237 MVRPDNCPEELY----------QLMRL-------CWKERPEDRPTFDYLRSVL 272
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 42/293 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++L +E +G G G V+ G +A+K + Q M+ L + M+Q+
Sbjct: 22 ETLKLVERLGAGQFGEVWMGYYNGH--TKVAVKSLKQGSMSPDAFLAEANL-----MKQL 74
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
+ H+ L+ L A VT+ +++ E+M+NGSL D L S + ++ L
Sbjct: 75 Q----------HQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL--L 121
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+A +A G+ ++ + IHRD++ AN+L+ D + +I+DFGLA+L+ D R
Sbjct: 122 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-E 177
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMR 474
+ APE T + KSD++SFG+LL +V G+ P+ N+ R R
Sbjct: 178 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 237
Query: 475 NVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
V P + MRL C + PE+RP+ +R +L
Sbjct: 238 MVRPDNCPEELY----------QLMRL-------CWKERPEDRPTFDYLRSVL 273
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 42/293 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++L +E +G G G V+ G +A+K + Q M+ L + M+Q+
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGH--TKVAVKSLKQGSMSPDAFLAEANL-----MKQL 65
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
+ H+ L+ L A VT+ +++ E+M+NGSL D L S + ++ L
Sbjct: 66 Q----------HQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLD- 113
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+A +A G+ ++ + IHRD++ AN+L+ D + +I+DFGLA+L+ D R
Sbjct: 114 -MAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-E 168
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMR 474
+ APE T + KSD++SFG+LL +V G+ P+ N+ R R
Sbjct: 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 228
Query: 475 NVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
V P + MRL C + PE+RP+ +R +L
Sbjct: 229 MVRPDNCPEELY----------QLMRL-------CWKERPEDRPTFDYLRSVL 264
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 42/293 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++L +E +G G G V+ G +A+K + Q M+ L + M+Q+
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGH--TKVAVKSLKQGSMSPDAFLAEANL-----MKQL 65
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
+ H+ L+ L A VT+ +++ E+M+NGSL D L S + ++ L
Sbjct: 66 Q----------HQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL--L 112
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+A +A G+ ++ + IHRD++ AN+L+ D + +I+DFGLA+L+ D R
Sbjct: 113 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-E 168
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMR 474
+ APE T + KSD++SFG+LL +V G+ P+ N+ R R
Sbjct: 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 228
Query: 475 NVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
V P + MRL C + PE+RP+ +R +L
Sbjct: 229 MVRPDNCPEELY----------QLMRL-------CWKERPEDRPTFDYLRSVL 264
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 42/293 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++L +E +G G G V+ G +A+K + Q M+ L + M+Q+
Sbjct: 8 ETLKLVERLGAGQFGEVWMGYYNGH--TKVAVKSLKQGSMSPDAFLAEANL-----MKQL 60
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
+ H+ L+ L A VT+ +++ E+M+NGSL D L S + ++ L
Sbjct: 61 Q----------HQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL--L 107
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+A +A G+ ++ + IHRD++ AN+L+ D + +I+DFGLA+L+ D R
Sbjct: 108 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-E 163
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMR 474
+ APE T + KSD++SFG+LL +V G+ P+ N+ R R
Sbjct: 164 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 223
Query: 475 NVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
V P + MRL C + PE+RP+ +R +L
Sbjct: 224 MVRPDNCPEELY----------QLMRL-------CWKERPEDRPTFDYLRSVL 259
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G VY AE +AIK I PP E L ++ + E+ +
Sbjct: 19 LGGGGMSTVYLAE-DTILNIKVAIKAIFIPPREKEETL-----------KRFEREVHNSS 66
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
++ H+N++ + DC+ LV E+++ +L + + S G +D + +
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE--SHGPLSVDTAINF--TNQILD 122
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+++ H I+HRDIKP N+LID +I DFG+AK + + + + V GT Y
Sbjct: 123 GIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET-SLTQTNHVLGTVQY 178
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
+PE + E +DIYS G++L ++VG+ PF+
Sbjct: 179 FSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 42/293 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++L +E +G G G V+ G +A+K + Q M+ L + M+Q+
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGH--TKVAVKSLKQGSMSPDAFLAEANL-----MKQL 71
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
+ H+ L+ L A VT+ +++ E+M+NGSL D L S + ++ L
Sbjct: 72 Q----------HQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL--L 118
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+A +A G+ ++ + IHRD++ AN+L+ D + +I+DFGLA+L+ D R
Sbjct: 119 DMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR-E 174
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMR 474
+ APE T + KSD++SFG+LL +V G+ P+ N+ R R
Sbjct: 175 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 234
Query: 475 NVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
V P + MRL C + PE+RP+ +R +L
Sbjct: 235 MVRPDNCPEELY----------QLMRL-------CWKERPEDRPTFDYLRSVL 270
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 42/293 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++L +E +G G G V+ G +A+K + Q M+ L + M+Q+
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGH--TKVAVKSLKQGSMSPDAFLAEANL-----MKQL 71
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
+ H+ L+ L A VT+ +++ E+M+NGSL D L S + ++ L
Sbjct: 72 Q----------HQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLD- 119
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+A +A G+ ++ + IHRD++ AN+L+ D + +I+DFGLA+L+ D R
Sbjct: 120 -MAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-E 174
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMR 474
+ APE T + KSD++SFG+LL +V G+ P+ N+ R R
Sbjct: 175 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 234
Query: 475 NVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
V P + MRL C + PE+RP+ +R +L
Sbjct: 235 MVRPDNCPEELY----------QLMRL-------CWKERPEDRPTFDYLRSVL 270
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 42/293 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++L +E +G G G V+ G +A+K + Q M+ L + M+Q+
Sbjct: 18 ETLKLVERLGAGQFGEVWMGYYNGH--TKVAVKSLKQGSMSPDAFLAEANL-----MKQL 70
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
+ H+ L+ L A VT+ +++ E+M+NGSL D L S + ++ L
Sbjct: 71 Q----------HQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLD- 118
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+A +A G+ ++ + IHRD++ AN+L+ D + +I+DFGLA+L+ D R
Sbjct: 119 -MAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-E 173
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMR 474
+ APE T + KSD++SFG+LL +V G+ P+ N+ R R
Sbjct: 174 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 233
Query: 475 NVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
V P + MRL C + PE+RP+ +R +L
Sbjct: 234 MVRPDNCPEELY----------QLMRL-------CWKERPEDRPTFDYLRSVL 269
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 42/293 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++L +E +G G G V+ G +A+K + Q M+ L + M+Q+
Sbjct: 23 ETLKLVERLGAGQFGEVWMGYYNGH--TKVAVKSLKQGSMSPDAFLAEANL-----MKQL 75
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
+ H+ L+ L A VT+ +++ E+M+NGSL D L S + ++ L
Sbjct: 76 Q----------HQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLD- 123
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+A +A G+ ++ + IHRD++ AN+L+ D + +I+DFGLA+L+ D R
Sbjct: 124 -MAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-E 178
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMR 474
+ APE T + KSD++SFG+LL +V G+ P+ N+ R R
Sbjct: 179 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 238
Query: 475 NVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
V P E++ ++++ C + PE+RP+ +R +L
Sbjct: 239 MVRPDNCP--------------EELYQLMRL---CWKERPEDRPTFDYLRSVL 274
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG GA VV A K +AIK+I N+ + M ++ EI
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEK-VAIKRI-----------NLEKC--QTSMDELLKEIQA 61
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL-HDVSQGRRE---LDWLARYRI 357
+ H N++ D LV + + GS+ DI+ H V++G + LD I
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGH--TRIRI- 414
R + GLEYLH + IHRD+K N+L+ + +I+DFG++ + G TR ++
Sbjct: 122 LREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR 178
Query: 415 TTVAGTTGYVAPE-YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWM 473
T GT ++APE Q K+DI+SFG+ L G P + +Y ++ +
Sbjct: 179 KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP---YHKYPPMKVLMLTL 235
Query: 474 RNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
+N + + K + Y + R K+ C DPE+RP++ ++
Sbjct: 236 QN--DPPSLETGVQDKEMLKKYGKSFR---KMISLCLQKDPEKRPTAAEL 280
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG GA VV A K +AIK+I N+ + M ++ EI
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEK-VAIKRI-----------NLEKC--QTSMDELLKEIQA 66
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL-HDVSQGRRE---LDWLARYRI 357
+ H N++ D LV + + GS+ DI+ H V++G + LD I
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGH--TRIRI- 414
R + GLEYLH + IHRD+K N+L+ + +I+DFG++ + G TR ++
Sbjct: 127 LREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR 183
Query: 415 TTVAGTTGYVAPE-YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWM 473
T GT ++APE Q K+DI+SFG+ L G P+ + ++ M+
Sbjct: 184 KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM--KVLMLTLQ 241
Query: 474 RNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
+ S E + K + Y + R K+ C DPE+RP++ ++
Sbjct: 242 NDPPSLET---GVQDKEMLKKYGKSFR---KMISLCLQKDPEKRPTAAEL 285
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 136/296 (45%), Gaps = 42/296 (14%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
+ ++G GA G V KA + AIKKI + +L+ +L + + +
Sbjct: 11 IAVLGQGAFGQVVKARNALD-SRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR--Y 67
Query: 301 TAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILH--DVSQGRRELDWLARYRIA 358
A + RN + V + + E+ +NG+L D++H +++Q R E +R+
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY-----WRLF 122
Query: 359 RGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK--------LMPDGH- 409
R + L Y+H IIHRD+KP N+ ID+ +I DFGLAK L D
Sbjct: 123 RQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 410 ---TRIRITTVAGTTGYVAPE-YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTE 465
+ +T+ GT YVA E T +EK D+YS G++ ++ +PF E
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGM---E 233
Query: 466 EMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSK 521
+N+++ +R+V S E P D+K M++ KI DP +RP ++
Sbjct: 234 RVNILKKLRSV-SIEFPPDFDDNK---------MKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 134/293 (45%), Gaps = 42/293 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++L +E +G G G V+ G +A+K + Q M+ L + M+Q+
Sbjct: 9 ETLKLVERLGAGQFGEVWMGYYNGH--TKVAVKSLKQGSMSPDAFLAEANL-----MKQL 61
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
+ H+ L+ L A VT+ +++ E+M+NGSL D L S + ++ L
Sbjct: 62 Q----------HQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKL--L 108
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+A +A G+ ++ + IHR+++ AN+L+ D + +I+DFGLA+L+ D R
Sbjct: 109 DMAAQIAEGMAFIEERN---YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-E 164
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMR 474
+ APE T + KSD++SFG+LL +V G+ P+ N+ R R
Sbjct: 165 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 224
Query: 475 NVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
V P + MRL C + PE+RP+ +R +L
Sbjct: 225 MVRPDNCPEELY----------QLMRL-------CWKERPEDRPTFDYLRSVL 260
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 115/244 (47%), Gaps = 38/244 (15%)
Query: 242 EIIGVGACG-VVY-KAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+IIG G G V Y + VPG +AIK + TE R+ R SE
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKA---GYTE----------RQRRDFLSEA 101
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRELDWLARYRI 357
G+ H N++ L+ VTR ++V E+M+NGSL L HD + + +
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-----GQFTIMQLVGM 156
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTV 417
RG+ +G+ YL +HRD+ NVL+D + ++SDFGL++++ D TT
Sbjct: 157 LRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTG 213
Query: 418 AG-TTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDFFQYTEEMNMVRWMRN 475
+ APE T S SD++SFGV++ VL G+ P+ NM R+
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY---------WNMTN--RD 262
Query: 476 VISS 479
VISS
Sbjct: 263 VISS 266
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 116/245 (47%), Gaps = 40/245 (16%)
Query: 242 EIIGVGACG-VVY-KAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+IIG G G V Y + VPG +AIK + TE R+ R SE
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKA---GYTE----------RQRRDFLSEA 101
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRELDWLARYRI 357
G+ H N++ L+ VTR ++V E+M+NGSL L HD + + +
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-----GQFTIMQLVGM 156
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTV 417
RG+ +G+ YL +HRD+ NVL+D + ++SDFGL++++ D TT
Sbjct: 157 LRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED-DPDAAYTTT 212
Query: 418 AGTTG--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDFFQYTEEMNMVRWMR 474
G + APE T S SD++SFGV++ VL G+ P+ NM R
Sbjct: 213 GGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY---------WNMTN--R 261
Query: 475 NVISS 479
+VISS
Sbjct: 262 DVISS 266
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 36/238 (15%)
Query: 228 DIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVL 287
D A LT E EIIG+G G VY+A G +A+K P
Sbjct: 5 DFAELTLE------EIIGIGGFGKVYRAF---WIGDEVAVKAARHDPDED---------- 45
Query: 288 INRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRR 347
I++ + ++ E + H N++ L+ + LV EF + G L +L S R
Sbjct: 46 ISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL---SGKRI 102
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEA--------RISDF 399
D L + + +A G+ YLH IIHRD+K +N+LI +E +I+DF
Sbjct: 103 PPDILVNWAVQ--IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160
Query: 400 GLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
GLA+ + H +++ AG ++APE + S+ SD++S+GVLL L+ G+ PF
Sbjct: 161 GLAR---EWHRTTKMSA-AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 31/250 (12%)
Query: 216 PAICARPIFKKRDIAFLTKEDSLASLEIIGVGACGVVYKA--EVPGSYGKMIAIKKIDQP 273
P R K+ DI+ + E ++IG G G V ++PG +AIK +
Sbjct: 19 PNEAVREFAKEIDISCVKIE------QVIGAGEFGEVCSGHLKLPGKREIFVAIKTL--- 69
Query: 274 PMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNG 333
+ ++ R SE G+ H N++ L+ VT+ +++ EFM+NG
Sbjct: 70 ----------KSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENG 119
Query: 334 SLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGME 393
SL L Q + + + RG+A+G++YL + +HRD+ N+L++ +
Sbjct: 120 SLDSFLR---QNDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLV 173
Query: 394 ARISDFGLAKLMPDGHTRIRITTVAG---TTGYVAPEYHQTLTISEKSDIYSFGVLL-AV 449
++SDFGL++ + D + T+ G + APE Q + SD++S+G+++ V
Sbjct: 174 CKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEV 233
Query: 450 LVVGKFPFDD 459
+ G+ P+ D
Sbjct: 234 MSYGERPYWD 243
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 130/279 (46%), Gaps = 38/279 (13%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G VYK + G A ++LNV ++++ K+E+
Sbjct: 20 IGSGSFGTVYKGKWHGD---------------VAVKMLNVT-APTPQQLQAFKNEVGVLR 63
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
+ H N+L + T+P +V ++ + SL LH S+ + E+ L IAR A
Sbjct: 64 KTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-ASETKFEMKKLID--IARQTAR 119
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G++YLH IIHRD+K N+ + + +I DFGLA + + ++G+ +
Sbjct: 120 GMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 176
Query: 424 VAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSE 480
+APE + S +SD+Y+FG++L L+ G+ P+ + + + MV R +S +
Sbjct: 177 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG--RGSLSPD 234
Query: 481 NPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPS 519
SK+ N + RL+ + C +ERPS
Sbjct: 235 L------SKVRSNCPKRMKRLMAE----CLKKKRDERPS 263
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 103/222 (46%), Gaps = 29/222 (13%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E +G GA V AE + GK+ A+K I + + E I++EI
Sbjct: 28 ETLGTGAFSEVVLAEEKAT-GKLFAVKCIPKKALKGKE-------------SSIENEIAV 73
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARG 360
+I H N++ L+ P+ LV + + G L D I+ ++ L R
Sbjct: 74 LRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR------ 127
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFGLAKLMPDGHTRIRITTV 417
L+ ++ HR I+HRD+KP N+L D+ + ISDFGL+K+ G ++T
Sbjct: 128 --QVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV---MSTA 182
Query: 418 AGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD 459
GT GYVAPE S+ D +S GV+ +L+ G PF D
Sbjct: 183 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 224
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 14/203 (6%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR-QIKSEIITAGRIWHRNLLPLQAHV 317
GS+GK+ A +++N ++VL M+ +I+ EI + H +++ L +
Sbjct: 25 GSFGKVKLAYHTTTGQKVALKIIN-KKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI 83
Query: 318 TRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCII 377
D ++V E+ N I+ +E AR R + + S +EY H R I+
Sbjct: 84 KSKDEIIMVIEYAGNELFDYIVQRDKMSEQE----AR-RFFQQIISAVEYCH---RHKIV 135
Query: 378 HRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEY-HQTLTISE 436
HRD+KP N+L+D+ + +I+DFGL+ +M DG+ + T G+ Y APE L
Sbjct: 136 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKLYAGP 192
Query: 437 KSDIYSFGVLLAVLVVGKFPFDD 459
+ D++S GV+L V++ + PFDD
Sbjct: 193 EVDVWSCGVILYVMLCRRLPFDD 215
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 14/203 (6%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR-QIKSEIITAGRIWHRNLLPLQAHV 317
GS+GK+ A +++N ++VL M+ +I+ EI + H +++ L +
Sbjct: 24 GSFGKVKLAYHTTTGQKVALKIIN-KKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI 82
Query: 318 TRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCII 377
D ++V E+ N I+ +E AR R + + S +EY H R I+
Sbjct: 83 KSKDEIIMVIEYAGNELFDYIVQRDKMSEQE----AR-RFFQQIISAVEYCH---RHKIV 134
Query: 378 HRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEY-HQTLTISE 436
HRD+KP N+L+D+ + +I+DFGL+ +M DG+ + T G+ Y APE L
Sbjct: 135 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKLYAGP 191
Query: 437 KSDIYSFGVLLAVLVVGKFPFDD 459
+ D++S GV+L V++ + PFDD
Sbjct: 192 EVDVWSCGVILYVMLCRRLPFDD 214
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 131/292 (44%), Gaps = 38/292 (13%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G VYK + G I +K +D P + + ++E+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKI-LKVVDPTP---------------EQFQAFRNEVAVLR 87
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
+ H N+L ++T+ D +V ++ + SL LH V + + ++ L IAR A
Sbjct: 88 KTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLH-VQETKFQMFQLID--IARQTAQ 143
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G++YLH + IIHRD+K N+ + +G+ +I DFGLA + ++ G+ +
Sbjct: 144 GMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLW 200
Query: 424 VAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSE 480
+APE S +SD+YS+G++L L+ G+ P+ + + MV R S +
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVG--RGYASPD 258
Query: 481 NPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCMLSQIKH 532
SKL N + RLV C EERP + + ++H
Sbjct: 259 ------LSKLYKNCPKAMKRLVAD----CVKKVKEERPLFPQILSSIELLQH 300
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 14/203 (6%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR-QIKSEIITAGRIWHRNLLPLQAHV 317
GS+GK+ A +++N ++VL M+ +I+ EI + H +++ L +
Sbjct: 15 GSFGKVKLAYHTTTGQKVALKIIN-KKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI 73
Query: 318 TRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCII 377
D ++V E+ N I+ +E AR R + + S +EY H R I+
Sbjct: 74 KSKDEIIMVIEYAGNELFDYIVQRDKMSEQE----AR-RFFQQIISAVEYCH---RHKIV 125
Query: 378 HRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEY-HQTLTISE 436
HRD+KP N+L+D+ + +I+DFGL+ +M DG+ + T G+ Y APE L
Sbjct: 126 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKLYAGP 182
Query: 437 KSDIYSFGVLLAVLVVGKFPFDD 459
+ D++S GV+L V++ + PFDD
Sbjct: 183 EVDVWSCGVILYVMLCRRLPFDD 205
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 14/203 (6%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR-QIKSEIITAGRIWHRNLLPLQAHV 317
GS+GK+ A +++N ++VL M+ +I+ EI + H +++ L +
Sbjct: 19 GSFGKVKLAYHTTTGQKVALKIIN-KKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI 77
Query: 318 TRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCII 377
D ++V E+ N I+ +E AR R + + S +EY H R I+
Sbjct: 78 KSKDEIIMVIEYAGNELFDYIVQRDKMSEQE----AR-RFFQQIISAVEYCH---RHKIV 129
Query: 378 HRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEY-HQTLTISE 436
HRD+KP N+L+D+ + +I+DFGL+ +M DG+ + T G+ Y APE L
Sbjct: 130 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKLYAGP 186
Query: 437 KSDIYSFGVLLAVLVVGKFPFDD 459
+ D++S GV+L V++ + PFDD
Sbjct: 187 EVDVWSCGVILYVMLCRRLPFDD 209
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 117/237 (49%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + +A ++++++R + + IK EI + H N++ H
Sbjct: 18 GAYGEVQLAVNRVTEEAVA-VKIVDMKRAVDCPE--NIKKEICINAMLNHENVVKFYGHR 74
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIG---I 126
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 240
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 135/296 (45%), Gaps = 42/296 (14%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
+ ++G GA G V KA + AIKKI + +L+ +L + + +
Sbjct: 11 IAVLGQGAFGQVVKARNALD-SRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR--Y 67
Query: 301 TAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILH--DVSQGRRELDWLARYRIA 358
A + RN + V + + E+ +N +L D++H +++Q R E +R+
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY-----WRLF 122
Query: 359 RGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK--------LMPDGH- 409
R + L Y+H IIHRD+KP N+ ID+ +I DFGLAK L D
Sbjct: 123 RQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 410 ---TRIRITTVAGTTGYVAPE-YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTE 465
+ +T+ GT YVA E T +EK D+YS G++ ++ +PF E
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGM---E 233
Query: 466 EMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSK 521
+N+++ +R+V S E P D+K M++ KI DP +RP ++
Sbjct: 234 RVNILKKLRSV-SIEFPPDFDDNK---------MKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 38/279 (13%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G VYK + G A ++LNV ++++ K+E+
Sbjct: 32 IGSGSFGTVYKGKWHGD---------------VAVKMLNVT-APTPQQLQAFKNEVGVLR 75
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
+ H N+L + T+P +V ++ + SL LH S+ + E+ L IAR A
Sbjct: 76 KTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLH-ASETKFEMKKL--IDIARQTAR 131
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G++YLH IIHRD+K N+ + + +I DFGLA + ++G+ +
Sbjct: 132 GMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 188
Query: 424 VAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSE 480
+APE + S +SD+Y+FG++L L+ G+ P+ + + + MV R +S +
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG--RGSLSPD 246
Query: 481 NPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPS 519
SK+ N + RL+ + C +ERPS
Sbjct: 247 L------SKVRSNCPKRMKRLMAE----CLKKKRDERPS 275
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + A ++++++R + + IK EI + H N++ H
Sbjct: 17 GAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYGHR 73
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIG---I 125
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 239
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + A ++++++R + + IK EI + H N++ H
Sbjct: 18 GAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYGHR 74
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIG---I 126
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 240
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + A ++++++R + + IK EI + H N++ H
Sbjct: 18 GAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYGHR 74
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIG---I 126
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 240
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + A ++++++R + + IK EI + H N++ H
Sbjct: 18 GAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYGHR 74
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIG---I 126
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 240
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + A ++++++R + + IK EI + H N++ H
Sbjct: 18 GAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYGHR 74
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIG---I 126
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 240
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 26/230 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G VYK + G A ++LNV ++++ K+E+
Sbjct: 21 IGSGSFGTVYKGKWHGD---------------VAVKMLNVT-APTPQQLQAFKNEVGVLR 64
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
+ H N+L + T+P +V ++ + SL LH + + + + IAR A
Sbjct: 65 KTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQ 120
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G++YLH IIHRD+K N+ + + + +I DFGLA + + ++G+ +
Sbjct: 121 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 424 VAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMV 470
+APE S +SD+Y+FG++L L+ G+ P+ + + + MV
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + A ++++++R + + IK EI + H N++ H
Sbjct: 17 GAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYGHR 73
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIG---I 125
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 239
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + A ++++++R + + IK EI + H N++ H
Sbjct: 17 GAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYGHR 73
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIG---I 125
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 239
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 117/237 (49%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + +A ++++++R + + IK EI + H N++ H
Sbjct: 17 GAYGEVQLAVNRVTEEAVA-VKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYGHR 73
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIG---I 125
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 239
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + A ++++++R + + IK EI + H N++ H
Sbjct: 17 GAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYGHR 73
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIG---I 125
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 239
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + A ++++++R + + IK EI + H N++ H
Sbjct: 16 GAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYGHR 72
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIG---I 124
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 185 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 238
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + A ++++++R + + IK EI + H N++ H
Sbjct: 18 GAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYGHR 74
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIG---I 126
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 240
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 26/230 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G VYK + G A ++LNV ++++ K+E+
Sbjct: 21 IGSGSFGTVYKGKWHGD---------------VAVKMLNVT-APTPQQLQAFKNEVGVLR 64
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
+ H N+L + T+P +V ++ + SL LH + + + + IAR A
Sbjct: 65 KTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQ 120
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G++YLH IIHRD+K N+ + + + +I DFGLA + + ++G+ +
Sbjct: 121 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 424 VAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMV 470
+APE S +SD+Y+FG++L L+ G+ P+ + + + MV
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + A ++++++R + + IK EI + H N++ H
Sbjct: 17 GAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYGHR 73
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIG---I 125
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 239
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 26/230 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G VYK + G A ++LNV ++++ K+E+
Sbjct: 44 IGSGSFGTVYKGKWHGD---------------VAVKMLNVT-APTPQQLQAFKNEVGVLR 87
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
+ H N+L + T+P +V ++ + SL LH + + + + IAR A
Sbjct: 88 KTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQ 143
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G++YLH IIHRD+K N+ + + + +I DFGLA + + ++G+ +
Sbjct: 144 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 200
Query: 424 VAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMV 470
+APE S +SD+Y+FG++L L+ G+ P+ + + + MV
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + A ++++++R + + IK EI + H N++ H
Sbjct: 18 GAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYGHR 74
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIG---I 126
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 240
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 26/230 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G VYK + G A ++LNV ++++ K+E+
Sbjct: 43 IGSGSFGTVYKGKWHGD---------------VAVKMLNVT-APTPQQLQAFKNEVGVLR 86
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
+ H N+L + T+P +V ++ + SL LH + + + + IAR A
Sbjct: 87 KTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQ 142
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G++YLH IIHRD+K N+ + + + +I DFGLA + + ++G+ +
Sbjct: 143 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 199
Query: 424 VAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMV 470
+APE S +SD+Y+FG++L L+ G+ P+ + + + MV
Sbjct: 200 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 249
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 26/230 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G VYK + G A ++LNV ++++ K+E+
Sbjct: 16 IGSGSFGTVYKGKWHGD---------------VAVKMLNVT-APTPQQLQAFKNEVGVLR 59
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
+ H N+L + T+P +V ++ + SL LH + + + + IAR A
Sbjct: 60 KTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQ 115
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G++YLH IIHRD+K N+ + + + +I DFGLA + + ++G+ +
Sbjct: 116 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 424 VAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMV 470
+APE S +SD+Y+FG++L L+ G+ P+ + + + MV
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 26/230 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G VYK + G A ++LNV ++++ K+E+
Sbjct: 18 IGSGSFGTVYKGKWHGD---------------VAVKMLNVT-APTPQQLQAFKNEVGVLR 61
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
+ H N+L + T+P +V ++ + SL LH + + + + IAR A
Sbjct: 62 KTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQ 117
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G++YLH IIHRD+K N+ + + + +I DFGLA + + ++G+ +
Sbjct: 118 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 174
Query: 424 VAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMV 470
+APE S +SD+Y+FG++L L+ G+ P+ + + + MV
Sbjct: 175 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 224
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + A ++++++R + + IK EI + H N++ H
Sbjct: 17 GAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYGHR 73
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIG---I 125
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 239
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + A ++++++R + + IK EI + H N++ H
Sbjct: 17 GAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPE--NIKKEIXINKMLNHENVVKFYGHR 73
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIG---I 125
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 239
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + A ++++++R + + IK EI + H N++ H
Sbjct: 17 GAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYGHR 73
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGIG---I 125
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 239
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 128/279 (45%), Gaps = 38/279 (13%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G VYK + G A ++LNV ++++ K+E+
Sbjct: 32 IGSGSFGTVYKGKWHGD---------------VAVKMLNVT-APTPQQLQAFKNEVGVLR 75
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
+ H N+L + T P +V ++ + SL LH S+ + E+ L IAR A
Sbjct: 76 KTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLH-ASETKFEMKKL--IDIARQTAR 131
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G++YLH IIHRD+K N+ + + +I DFGLA + ++G+ +
Sbjct: 132 GMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 188
Query: 424 VAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSE 480
+APE + S +SD+Y+FG++L L+ G+ P+ + + + MV R +S +
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG--RGSLSPD 246
Query: 481 NPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPS 519
SK+ N + RL+ + C +ERPS
Sbjct: 247 L------SKVRSNCPKRMKRLMAE----CLKKKRDERPS 275
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 136/286 (47%), Gaps = 48/286 (16%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKK-IDQPPMAATELLNVRRVLINRKMRQIKSEIITA 302
IG G G+V+K + ++AIK I TE++ K ++ + E+
Sbjct: 27 IGKGGFGLVHKGRLVKD-KSVVAIKSLILGDSEGETEMI--------EKFQEFQREVFIM 77
Query: 303 GRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMA 362
+ H N++ L + P +V EF+ G D+ H + + W + R+ +A
Sbjct: 78 SNLNHPNIVKLYGLMHNPP--RMVMEFVPCG---DLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 363 SGLEYLHMYHRPCIIHRDIKPANVLIDDGME-----ARISDFGLAKLMPDGHTRIRITTV 417
G+EY+ P I+HRD++ N+ + E A+++DFGL++ + ++ +
Sbjct: 133 LGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGL 186
Query: 418 AGTTGYVAPEY--HQTLTISEKSDIYSFGVLLAVLVVGKFPFDDF-FQYTEEMNMVR--W 472
G ++APE + + +EK+D YSF ++L ++ G+ PFD++ + + +NM+R
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246
Query: 473 MRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERP 518
+R I + P R +R V+++ C S DP++RP
Sbjct: 247 LRPTIPEDCPPR--------------LRNVIEL---CWSGDPKKRP 275
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 100
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 101 FQDDEKLYFGLSYAKNGCLLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGI 153
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R + GT YV+PE + S+
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASK 213
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 214 SSDLWALGCIIYQLVAGLPPF 234
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 25/225 (11%)
Query: 242 EIIGVGACGVVYKA--EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
++IG G G V ++PG +AIK + TE ++ R SE
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKS---GYTE----------KQRRDFLSEA 59
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIAR 359
G+ H N++ L+ VT+ +++ EFM+NGSL L Q + + + R
Sbjct: 60 SIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR---QNDGQFTVIQLVGMLR 116
Query: 360 GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAG 419
G+A+G++YL + +HR + N+L++ + ++SDFGL++ + D + T+ G
Sbjct: 117 GIAAGMKYLADMN---YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 173
Query: 420 ---TTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDF 460
+ APE Q + SD++S+G+++ V+ G+ P+ D
Sbjct: 174 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 218
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + A ++++++R + + IK EI + H N++ H
Sbjct: 17 GAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPE--NIKKEICINKMLNHENVVKFYGHR 73
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGI---GI 125
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYL---NPWKKIDSAPLA 239
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + A ++++++R + + IK EI + H N++ H
Sbjct: 18 GAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPE--NIKKEIXINKMLNHENVVKFYGHR 74
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGI---GI 126
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 186
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 240
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
G+YG++ +A+ ++ + A ++++++R + + IK EI + H N++ H
Sbjct: 17 GAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPE--NIKKEIXINKMLNHENVVKFYGHR 73
Query: 318 TRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
+ L E+ G L D I D+ G E D R + +G+ YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD---AQRFFHQLMAGVVYLHGI---GI 125
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-S 435
HRDIKP N+L+D+ +ISDFGLA + + + + GT YVAPE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
E D++S G++L ++ G+ P+D +E + + + + NP + IDS L
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL---NPWKKIDSAPLA 239
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 123/286 (43%), Gaps = 44/286 (15%)
Query: 238 LASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
L L+ +G G GVV + G Y +AIK I + M+ E + +V++N
Sbjct: 11 LTFLKELGTGQFGVVKYGKWRGQYD--VAIKMIKEGSMSEDEFIEEAKVMMN-------- 60
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
+ H L+ L T+ ++ E+M NG L + L ++ R +
Sbjct: 61 -------LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEM 110
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK-LMPDGHTRIRITT 416
+ + +EYL +HRD+ N L++D ++SDFGL++ ++ D +T R +
Sbjct: 111 CKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSK 167
Query: 417 VAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDFFQYTEEMNMVRWMRN 475
+ PE S KSDI++FGVL+ + +GK P++ F ++ + +R
Sbjct: 168 FP--VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRL 225
Query: 476 VISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSK 521
PH A + V I Y C + +ERP+ K
Sbjct: 226 Y----RPHLASEK-------------VYTIMYSCWHEKADERPTFK 254
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 22 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 68
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E++ + +A ++S
Sbjct: 69 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 123
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 124 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKW 179
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 224
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 23 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 69
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E++ + +A ++S
Sbjct: 70 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 124
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKW 180
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 225
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G VYK + G A ++LNV ++++ K+E+
Sbjct: 36 IGSGSFGTVYKGKWHGD---------------VAVKMLNVT-APTPQQLQAFKNEVGVLR 79
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
+ H N+L + T+P +V ++ + SL LH + + + + IAR A
Sbjct: 80 KTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQ 135
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G++YLH IIHRD+K N+ + + + +I DFGLA + ++G+ +
Sbjct: 136 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 192
Query: 424 VAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMV 470
+APE S +SD+Y+FG++L L+ G+ P+ + + + MV
Sbjct: 193 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 242
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 34 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 80
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E++ + +A ++S
Sbjct: 81 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 135
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 136 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 191
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 192 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 236
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E IG G V K G+M+AIK +D+ + + + +IK+EI
Sbjct: 16 ETIGTGGFAKV-KLACHILTGEMVAIKIMDKNTLGSD-------------LPRIKTEIEA 61
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+ H+++ L + + +V E+ G L D + +SQ R L + R +
Sbjct: 62 LKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYI--ISQDR--LSEEETRVVFRQI 117
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTT 421
S + Y+H HRD+KP N+L D+ + ++ DFGL P G+ + T G+
Sbjct: 118 VSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSL 173
Query: 422 GYVAPEYHQTLT-ISEKSDIYSFGVLLAVLVVGKFPFDD 459
Y APE Q + + ++D++S G+LL VL+ G PFDD
Sbjct: 174 AYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD 212
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 22 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 68
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E++ + +A ++S
Sbjct: 69 ---HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 123
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 124 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKW 179
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 224
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 26 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 72
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E++ + +A ++S
Sbjct: 73 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 127
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 183
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 38/278 (13%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G VYK + G A ++LNV ++++ K+E+
Sbjct: 16 IGSGSFGTVYKGKWHGD---------------VAVKMLNVT-APTPQQLQAFKNEVGVLR 59
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
+ H N+L + T P +V ++ + SL LH + + + + IAR A
Sbjct: 60 KTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQ 115
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G++YLH IIHRD+K N+ + + + +I DFGLA + + ++G+ +
Sbjct: 116 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 424 VAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSE 480
+APE S +SD+Y+FG++L L+ G+ P+ + + + MV R +S +
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG--RGYLSPD 230
Query: 481 NPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERP 518
SK+ N + RL+ + C +ERP
Sbjct: 231 L------SKVRSNCPKAMKRLMAE----CLKKKRDERP 258
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G VYK + G A ++LNV ++++ K+E+
Sbjct: 16 IGSGSFGTVYKGKWHGD---------------VAVKMLNVT-APTPQQLQAFKNEVGVLR 59
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
+ H N+L + T+P +V ++ + SL LH + + + + IAR A
Sbjct: 60 KTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQ 115
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G++YLH IIHRD+K N+ + + + +I DFGLA + ++G+ +
Sbjct: 116 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 172
Query: 424 VAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMV 470
+APE S +SD+Y+FG++L L+ G+ P+ + + + MV
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 26/230 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G VYK + G A ++LNV ++++ K+E+
Sbjct: 44 IGSGSFGTVYKGKWHGD---------------VAVKMLNVT-APTPQQLQAFKNEVGVLR 87
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
+ H N+L + T+P +V ++ + SL LH + + + + IAR A
Sbjct: 88 KTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIET---KFEMIKLIDIARQTAQ 143
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G++YLH IIHRD+K N+ + + + +I DFGLA + ++G+ +
Sbjct: 144 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 200
Query: 424 VAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMV 470
+APE S +SD+Y+FG++L L+ G+ P+ + + + MV
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 26 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 72
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E++ + +A ++S
Sbjct: 73 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 127
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKW 183
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 23 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 69
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E++ + +A ++S
Sbjct: 70 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 124
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 180
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 225
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 48/288 (16%)
Query: 238 LASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
L L+ +G G GVV + G Y +AIK I + M+ E + +V++N
Sbjct: 17 LTFLKELGTGQFGVVKYGKWRGQYD--VAIKMIKEGSMSEDEFIEEAKVMMN-------- 66
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
+ H L+ L T+ ++ E+M NG L + L ++ R +
Sbjct: 67 -------LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEM 116
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTV 417
+ + +EYL +HRD+ N L++D ++SDFGL++ + D T+
Sbjct: 117 CKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----YTSS 169
Query: 418 AGT---TGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDFFQYTEEMNMVRWM 473
G+ + PE S KSDI++FGVL+ + +GK P++ F ++ + +
Sbjct: 170 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 229
Query: 474 RNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSK 521
R PH A + V I Y C + +ERP+ K
Sbjct: 230 RLY----RPHLASEK-------------VYTIMYSCWHEKADERPTFK 260
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 48/288 (16%)
Query: 238 LASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
L L+ +G G GVV + G Y +AIK I + M+ E + +V++N
Sbjct: 10 LTFLKELGTGQFGVVKYGKWRGQYD--VAIKMIKEGSMSEDEFIEEAKVMMN-------- 59
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
+ H L+ L T+ ++ E+M NG L + L ++ R +
Sbjct: 60 -------LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEM 109
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTV 417
+ + +EYL +HRD+ N L++D ++SDFGL++ + D T+
Sbjct: 110 CKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----YTSS 162
Query: 418 AGT---TGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDFFQYTEEMNMVRWM 473
G+ + PE S KSDI++FGVL+ + +GK P++ F ++ + +
Sbjct: 163 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 222
Query: 474 RNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSK 521
R PH A + V I Y C + +ERP+ K
Sbjct: 223 RLY----RPHLASEK-------------VYTIMYSCWHEKADERPTFK 253
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 119/250 (47%), Gaps = 31/250 (12%)
Query: 216 PAICARPIFKKRDIAFLTKEDSLASLEIIGVGACGVVYKA--EVPGSYGKMIAIKKIDQP 273
P R K+ D++++ E E+IG G G V + + PG +AIK +
Sbjct: 2 PNEAVREFAKEIDVSYVKIE------EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKG- 54
Query: 274 PMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNG 333
TE R+ R+ SE G+ H N++ L+ VT +++ EFM+NG
Sbjct: 55 --GYTE----------RQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENG 102
Query: 334 SLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGME 393
+L L ++ G+ + L + RG+ASG+ YL +HRD+ N+L++ +
Sbjct: 103 ALDSFLR-LNDGQFTVIQLV--GMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLV 156
Query: 394 ARISDFGLAKLMPDGHTRIRITTVAG---TTGYVAPEYHQTLTISEKSDIYSFGVLL-AV 449
++SDFGL++ + + + T+ G + APE + SD +S+G+++ V
Sbjct: 157 CKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEV 216
Query: 450 LVVGKFPFDD 459
+ G+ P+ D
Sbjct: 217 MSFGERPYWD 226
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 40 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 97
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 98 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGI 150
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R + GT YV+PE + +
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 210
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 211 SSDLWALGCIIYQLVAGLPPF 231
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 23 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 69
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E++ + +A ++S
Sbjct: 70 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 124
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 180
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 225
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 48/288 (16%)
Query: 238 LASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
L L+ +G G GVV + G Y +AIK I + M+ E + +V++N
Sbjct: 6 LTFLKELGTGQFGVVKYGKWRGQYD--VAIKMIKEGSMSEDEFIEEAKVMMN-------- 55
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
+ H L+ L T+ ++ E+M NG L + L ++ R +
Sbjct: 56 -------LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEM 105
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTV 417
+ + +EYL +HRD+ N L++D ++SDFGL++ + D T+
Sbjct: 106 CKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----YTSS 158
Query: 418 AGT---TGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDFFQYTEEMNMVRWM 473
G+ + PE S KSDI++FGVL+ + +GK P++ F ++ + +
Sbjct: 159 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 218
Query: 474 RNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSK 521
R PH A + V I Y C + +ERP+ K
Sbjct: 219 RLY----RPHLASEK-------------VYTIMYSCWHEKADERPTFK 249
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 26 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 72
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E++ + +A ++S
Sbjct: 73 ---HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 127
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 183
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 26 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 72
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E++ + +A ++S
Sbjct: 73 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 127
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 183
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 48/288 (16%)
Query: 238 LASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
L L+ +G G GVV + G Y +AIK I + M+ E + +V++N
Sbjct: 11 LTFLKELGTGQFGVVKYGKWRGQYD--VAIKMIKEGSMSEDEFIEEAKVMMN-------- 60
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
+ H L+ L T+ ++ E+M NG L + L ++ R +
Sbjct: 61 -------LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEM 110
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTV 417
+ + +EYL +HRD+ N L++D ++SDFGL++ + D T+
Sbjct: 111 CKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----YTSS 163
Query: 418 AGT---TGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDFFQYTEEMNMVRWM 473
G+ + PE S KSDI++FGVL+ + +GK P++ F ++ + +
Sbjct: 164 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 223
Query: 474 RNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSK 521
R PH A + V I Y C + +ERP+ K
Sbjct: 224 RLY----RPHLASEK-------------VYTIMYSCWHEKADERPTFK 254
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 21 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 67
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E++ + +A ++S
Sbjct: 68 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 122
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 178
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 48/288 (16%)
Query: 238 LASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
L L+ +G G GVV + G Y +AIK I + M+ E + +V++N
Sbjct: 26 LTFLKELGTGQFGVVKYGKWRGQYD--VAIKMIKEGSMSEDEFIEEAKVMMN-------- 75
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
+ H L+ L T+ ++ E+M NG L + L ++ R +
Sbjct: 76 -------LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEM 125
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTV 417
+ + +EYL +HRD+ N L++D ++SDFGL++ + D T+
Sbjct: 126 CKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE----TSS 178
Query: 418 AGT---TGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDFFQYTEEMNMVRWM 473
G+ + PE S KSDI++FGVL+ + +GK P++ F ++ + +
Sbjct: 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
Query: 474 RNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSK 521
R PH A + V I Y C + +ERP+ K
Sbjct: 239 RLY----RPHLASEK-------------VYTIMYSCWHEKADERPTFK 269
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 25 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 71
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E++ + +A ++S
Sbjct: 72 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 126
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 127 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 182
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 227
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 21 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 67
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E++ + +A ++S
Sbjct: 68 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 122
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 178
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 48/288 (16%)
Query: 238 LASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
L L+ +G G GVV + G Y +AIK I + M+ E + +V++N
Sbjct: 26 LTFLKELGTGQFGVVKYGKWRGQYD--VAIKMIKEGSMSEDEFIEEAKVMMN-------- 75
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
+ H L+ L T+ ++ E+M NG L + L ++ R +
Sbjct: 76 -------LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEM 125
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTV 417
+ + +EYL +HRD+ N L++D ++SDFGL++ + D T+
Sbjct: 126 CKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----YTSS 178
Query: 418 AGT---TGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDFFQYTEEMNMVRWM 473
G+ + PE S KSDI++FGVL+ + +GK P++ F ++ + +
Sbjct: 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
Query: 474 RNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSK 521
R PH A + V I Y C + +ERP+ K
Sbjct: 239 RLY----RPHLASEK-------------VYTIMYSCWHEKADERPTFK 269
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 135/302 (44%), Gaps = 43/302 (14%)
Query: 227 RDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRV 286
+D+ + +E SL ++ +G G G V+ G+ +AIK + M+ L ++
Sbjct: 1 KDVWEIPRE-SLQLIKRLGNGQFGEVWMGTWNGN--TKVAIKTLKPGTMSPESFLEEAQI 57
Query: 287 LINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGR 346
M+++K H L+ L A V+ ++ V E+M GSL D L D +GR
Sbjct: 58 -----MKKLK----------HDKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKD-GEGR 100
Query: 347 RELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMP 406
L +A +A+G+ Y+ R IHRD++ AN+L+ +G+ +I+DFGLA+L+
Sbjct: 101 -ALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIE 156
Query: 407 DGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTE 465
D R + APE + KSD++SFG+LL LV G+ P+
Sbjct: 157 DNEXTAR-QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREV 215
Query: 466 EMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRC 525
+ R R + P + ++ C DPEERP+ + ++
Sbjct: 216 LEQVERGYRMPCPQDCPIS-----------------LHELMIHCWKKDPEERPTFEYLQS 258
Query: 526 ML 527
L
Sbjct: 259 FL 260
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 23/215 (10%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 19 LGGGQFGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 65
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E+ + +A ++S
Sbjct: 66 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 120
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKW 176
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
APE S KSD+++FGVLL + G P+
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 21 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 67
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E+ + +A ++S
Sbjct: 68 ---HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 122
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 178
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 21 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 67
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E+ + +A ++S
Sbjct: 68 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 122
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 178
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 25/229 (10%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
L IG G+ G K S GK++ K++D M E +++L+ SE+
Sbjct: 11 LYTIGTGSYGRCQKIRRK-SDGKILVWKELDYGSMTEAE----KQMLV--------SEVN 57
Query: 301 TAGRIWHRNLLPLQAHVT-RPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIA 358
+ H N++ + R + L +V E+ + G L + +++G +E +L +
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASV---ITKGTKERQYLDEEFVL 114
Query: 359 RGMASGLEYLHMYHRP-----CIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIR 413
R M L HR ++HRD+KPANV +D ++ DFGLA+++ H
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSF 172
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQ 462
T GT Y++PE ++ +EKSDI+S G LL L PF F Q
Sbjct: 173 AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ 221
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 44 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 101
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 102 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGI 154
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R + GT YV+PE + +
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 214
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 215 SSDLWALGCIIYQLVAGLPPF 235
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 40 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 97
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 98 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGI 150
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R GT YV+PE + +
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 210
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 211 SSDLWALGCIIYQLVAGLPPF 231
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 21 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 67
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E+ + +A ++S
Sbjct: 68 ---HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 122
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 178
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 26 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 72
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E+ + +A ++S
Sbjct: 73 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 127
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 183
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 117/241 (48%), Gaps = 31/241 (12%)
Query: 225 KKRDIAFLTKEDSLASLEIIGVGACGVVYKA--EVPGSYGKMIAIKKIDQPPMAATELLN 282
K+ D++++ E E+IG G G V + + PG +AIK + TE
Sbjct: 9 KEIDVSYVKIE------EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKG---GYTE--- 56
Query: 283 VRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDV 342
R+ R+ SE G+ H N++ L+ VT +++ EFM+NG+L L +
Sbjct: 57 -------RQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR-L 108
Query: 343 SQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLA 402
+ G+ + L + RG+ASG+ YL +HRD+ N+L++ + ++SDFGL+
Sbjct: 109 NDGQFTVIQLVG--MLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLS 163
Query: 403 KLMPDGHTRIRITTVAG---TTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFD 458
+ + + + T+ G + APE + SD +S+G+++ V+ G+ P+
Sbjct: 164 RFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYW 223
Query: 459 D 459
D
Sbjct: 224 D 224
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 21 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 67
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E+ + +A ++S
Sbjct: 68 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 122
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 178
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 23/215 (10%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 19 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 65
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E+ + +A ++S
Sbjct: 66 ---HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 120
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKW 176
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
APE S KSD+++FGVLL + G P+
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 25 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 82
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 83 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGI 135
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R GT YV+PE + +
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 195
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 196 SSDLWALGCIIYQLVAGLPPF 216
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
+ E++K G+L+ I+ + + W R A+ +ASG+ YLH + IIHRD+
Sbjct: 84 FITEYIKGGTLRGIIKSMDS---QYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSH 137
Query: 385 NVLIDDGMEARISDFGLAKLMPDGHT------------RIRITTVAGTTGYVAPEYHQTL 432
N L+ + ++DFGLA+LM D T R + TV G ++APE
Sbjct: 138 NCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGR 197
Query: 433 TISEKSDIYSFGVLLAVLVVGKFPFD-DFFQYTEEMNMVRWMRNVISSENPHRAIDSKLL 491
+ EK D++SFG++L ++G+ D D+ T + + +R + P S
Sbjct: 198 SYDEKVDVFSFGIVLCE-IIGRVNADPDYLPRTMDFGLN--VRGFLDRYCPPNCPPS--- 251
Query: 492 GNGYEEQMRLVLKIAYFCTSDDPEERPS 519
I C DPE+RPS
Sbjct: 252 ----------FFPITVRCCDLDPEKRPS 269
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWL 352
IK EI + H N++ H + L E+ G L D I D+ G E D
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPD-- 105
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
R + +G+ YLH I HRDIKP N+L+D+ +ISDFGLA + +
Sbjct: 106 -AQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 161
Query: 413 RITTVAGTTGYVAPEYHQTLTI-SEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVR 471
+ + GT YVAPE + +E D++S G++L ++ G+ P+D +E + +
Sbjct: 162 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 472 WMRNVISSENPHRAIDSKLLG 492
+ + NP + IDS L
Sbjct: 222 EKKTYL---NPWKKIDSAPLA 239
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 41 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 98
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 99 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGI 151
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R GT YV+PE + +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACK 211
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 212 SSDLWALGCIIYQLVAGLPPF 232
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 41 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 98
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 99 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGI 151
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R GT YV+PE + +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 212 SSDLWALGCIIYQLVAGLPPF 232
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 140/298 (46%), Gaps = 48/298 (16%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKK-IDQPPMAATELLNVRRVLINRKMRQIKSEIITA 302
IG G G+V+K + ++AIK I TE++ K ++ + E+
Sbjct: 27 IGKGGFGLVHKGRLVKD-KSVVAIKSLILGDSEGETEMI--------EKFQEFQREVFIM 77
Query: 303 GRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMA 362
+ H N++ L + P +V EF+ G D+ H + + W + R+ +A
Sbjct: 78 SNLNHPNIVKLYGLMHNPP--RMVMEFVPCG---DLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 363 SGLEYLHMYHRPCIIHRDIKPANVLIDDGME-----ARISDFGLAKLMPDGHTRIRITTV 417
G+EY+ P I+HRD++ N+ + E A+++DFG ++ + ++ +
Sbjct: 133 LGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGL 186
Query: 418 AGTTGYVAPEY--HQTLTISEKSDIYSFGVLLAVLVVGKFPFDDF-FQYTEEMNMVR--W 472
G ++APE + + +EK+D YSF ++L ++ G+ PFD++ + + +NM+R
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246
Query: 473 MRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCMLSQI 530
+R I + P R +R V+++ C S DP++RP + LS++
Sbjct: 247 LRPTIPEDCPPR--------------LRNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 41 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 98
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 99 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGI 151
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R GT YV+PE + +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 212 SSDLWALGCIIYQLVAGLPPF 232
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 100
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 101 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGI 153
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R GT YV+PE + +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 214 SSDLWALGCIIYQLVAGLPPF 234
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
++IG G G VYK + S GK + P+A L + ++ E
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGK-------KEVPVAIKTL---KAGYTEKQRVDFLGEAGI 99
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
G+ H N++ L+ +++ +++ E+M+NG+L L + E L + RG+
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG---EFSVLQLVGMLRGI 156
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTT 421
A+G++YL + +HRD+ N+L++ + ++SDFGL++++ D TT G
Sbjct: 157 AAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED-DPEATYTTSGGKI 212
Query: 422 G--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ APE + SD++SFG+++ V+ G+ P+
Sbjct: 213 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY 251
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 19 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 76
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 77 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHG---KGI 129
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R GT YV+PE + +
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 189
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 190 SSDLWALGCIIYQLVAGLPPF 210
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 307 HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY--RIARGMASG 364
H L+ L A VTR + ++ E+M GSL D L G+ L L + +IA GMA
Sbjct: 67 HDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA-- 124
Query: 365 LEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYV 424
Y+ R IHRD++ ANVL+ + + +I+DFGLA+++ D R +
Sbjct: 125 --YIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR-EGAKFPIKWT 178
Query: 425 APEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
APE + KSD++SFG+LL ++ GK P+
Sbjct: 179 APEAINFGCFTIKSDVWSFGILLYEIVTYGKIPY 212
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 23/215 (10%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 19 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 65
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E+ + +A ++S
Sbjct: 66 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 120
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKW 176
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
APE S KSD+++FGVLL + G P+
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 18 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 75
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 76 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHG---KGI 128
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R GT YV+PE + +
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 188
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 189 SSDLWALGCIIYQLVAGLPPF 209
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 100
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 101 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGI 153
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R GT YV+PE + +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 214 SSDLWALGCIIYQLVAGLPPF 234
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 134/293 (45%), Gaps = 43/293 (14%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
L E+ LE IG G+ G V+K + K++AIK ID + + +
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV--- 58
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELD 350
+ Q S +T ++ + L D L ++ E++ GS D+L LD
Sbjct: 59 LSQCDSPYVTK---YYGSYLK--------DTKLWIIMEYLGGGSALDLLEP-----GPLD 102
Query: 351 WLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHT 410
I R + GL+YLH + IHRDIK ANVL+ + E +++DFG+A + D T
Sbjct: 103 ETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--T 157
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMV 470
+I+ T GT ++APE + K+DI+S G+ L G+ P + M ++
Sbjct: 158 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL----HPMKVL 213
Query: 471 RWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
+I NP L GN Y + ++ ++ C + +P RP++K++
Sbjct: 214 F----LIPKNNP-----PTLEGN-YSKPLKEFVEA---CLNKEPSFRPTAKEL 253
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 135/286 (47%), Gaps = 48/286 (16%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKK-IDQPPMAATELLNVRRVLINRKMRQIKSEIITA 302
IG G G+V+K + ++AIK I TE++ K ++ + E+
Sbjct: 27 IGKGGFGLVHKGRLVKD-KSVVAIKSLILGDSEGETEMI--------EKFQEFQREVFIM 77
Query: 303 GRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMA 362
+ H N++ L + P +V EF+ G D+ H + + W + R+ +A
Sbjct: 78 SNLNHPNIVKLYGLMHNPP--RMVMEFVPCG---DLYHRLLDKAHPIKWSVKLRLMLDIA 132
Query: 363 SGLEYLHMYHRPCIIHRDIKPANVLIDDGME-----ARISDFGLAKLMPDGHTRIRITTV 417
G+EY+ P I+HRD++ N+ + E A+++DF L++ + ++ +
Sbjct: 133 LGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGL 186
Query: 418 AGTTGYVAPEY--HQTLTISEKSDIYSFGVLLAVLVVGKFPFDDF-FQYTEEMNMVR--W 472
G ++APE + + +EK+D YSF ++L ++ G+ PFD++ + + +NM+R
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246
Query: 473 MRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERP 518
+R I + P R +R V+++ C S DP++RP
Sbjct: 247 LRPTIPEDCPPR--------------LRNVIEL---CWSGDPKKRP 275
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 100
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 101 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGI 153
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R GT YV+PE + +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 214 SSDLWALGCIIYQLVAGLPPF 234
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 20 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 77
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 78 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHG---KGI 130
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R GT YV+PE + +
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 190
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 191 SSDLWALGCIIYQLVAGLPPF 211
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 100
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 101 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGI 153
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R GT YV+PE + +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 214 SSDLWALGCIIYQLVAGLPPF 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 44 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 101
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 102 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGI 154
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R GT YV+PE + +
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 214
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 215 SSDLWALGCIIYQLVAGLPPF 235
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 100
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 101 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGI 153
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R GT YV+PE + +
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXK 213
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 214 SSDLWALGCIIYQLVAGLPPF 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 46 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 103
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 104 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGI 156
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R GT YV+PE + +
Sbjct: 157 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 216
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 217 SSDLWALGCIIYQLVAGLPPF 237
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 77/134 (57%), Gaps = 8/134 (5%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
+V E++ +L+DI+H ++G + R +A + L+ H+ IIHRD+KPA
Sbjct: 93 IVMEYVDGVTLRDIVH--TEG-----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA 145
Query: 385 NVLIDDGMEARISDFGLAKLMPD-GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSF 443
N+LI ++ DFG+A+ + D G++ + V GT Y++PE + ++ +SD+YS
Sbjct: 146 NILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 444 GVLLAVLVVGKFPF 457
G +L ++ G+ PF
Sbjct: 206 GCVLYEVLTGEPPF 219
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ + +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 41 GSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 98
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 99 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGI 151
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R GT YV+PE + +
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 212 SSDLWALGCIIYQLVAGLPPF 232
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 110/217 (50%), Gaps = 20/217 (9%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
++G G+ VY+AE + G +AIK ID+ M ++ +++++E+
Sbjct: 17 NLLGKGSFAGVYRAESIHT-GLEVAIKMIDKKAMYKAGMV-----------QRVQNEVKI 64
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
++ H ++L L + + LV E NG + L + + E + AR+ + + +
Sbjct: 65 HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENE--ARHFMHQ-I 121
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTT 421
+G+ YLH + I+HRD+ +N+L+ M +I+DFGLA + H + T+ GT
Sbjct: 122 ITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY--TLCGTP 176
Query: 422 GYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
Y++PE +SD++S G + L++G+ PFD
Sbjct: 177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L + T
Sbjct: 21 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFT 78
Query: 319 RPDCHLLVY--EFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
D L + + KNG L + + + R+ A + S LEYLH I
Sbjct: 79 FQDDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLHG---KGI 131
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
IHRD+KP N+L+++ M +I+DFG AK++ + R GT YV+PE + +
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 191
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
SD+++ G ++ LV G PF
Sbjct: 192 SSDLWALGCIIYQLVAGLPPF 212
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 135/290 (46%), Gaps = 43/290 (14%)
Query: 235 EDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQ 294
E+ LE IG G+ G V+K + K++AIK ID + + + + Q
Sbjct: 26 EELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV---LSQ 81
Query: 295 IKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDWLA 353
S +T ++ + L D L ++ E++ GS D+L LD
Sbjct: 82 CDSPYVTK---YYGSYLK--------DTKLWIIMEYLGGGSALDLLEP-----GPLDETQ 125
Query: 354 RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIR 413
I R + GL+YLH + IHRDIK ANVL+ + E +++DFG+A + D T+I+
Sbjct: 126 IATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIK 180
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWM 473
T GT ++APE + K+DI+S G+ L G+ P E++ ++ +
Sbjct: 181 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHS-------ELHPMKVL 233
Query: 474 RNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
+I NP L GN Y + ++ ++ C + +P RP++K++
Sbjct: 234 F-LIPKNNP-----PTLEGN-YSKPLKEFVEA---CLNKEPSFRPTAKEL 273
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 7/199 (3%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+ ++ +++ A ++L R ++ K+ + E R+ H + L
Sbjct: 48 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQ 107
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
+ + KNG L + + + R+ A + S LEYLH IIH
Sbjct: 108 DDEKLYFGLSYAKNGELLKYIRKIGSFD---ETCTRFYTAE-IVSALEYLH---GKGIIH 160
Query: 379 RDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS 438
RD+KP N+L+++ M +I+DFG AK++ + R GT YV+PE + + S
Sbjct: 161 RDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 220
Query: 439 DIYSFGVLLAVLVVGKFPF 457
D+++ G ++ LV G PF
Sbjct: 221 DLWALGCIIYQLVAGLPPF 239
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 77/134 (57%), Gaps = 8/134 (5%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
+V E++ +L+DI+H ++G + R +A + L+ H+ IIHRD+KPA
Sbjct: 93 IVMEYVDGVTLRDIVH--TEG-----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA 145
Query: 385 NVLIDDGMEARISDFGLAKLMPD-GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSF 443
N++I ++ DFG+A+ + D G++ + V GT Y++PE + ++ +SD+YS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 444 GVLLAVLVVGKFPF 457
G +L ++ G+ PF
Sbjct: 206 GCVLYEVLTGEPPF 219
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 77/134 (57%), Gaps = 8/134 (5%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
+V E++ +L+DI+H ++G + R +A + L+ H+ IIHRD+KPA
Sbjct: 93 IVMEYVDGVTLRDIVH--TEG-----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA 145
Query: 385 NVLIDDGMEARISDFGLAKLMPD-GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSF 443
N++I ++ DFG+A+ + D G++ + V GT Y++PE + ++ +SD+YS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 444 GVLLAVLVVGKFPF 457
G +L ++ G+ PF
Sbjct: 206 GCVLYEVLTGEPPF 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 77/134 (57%), Gaps = 8/134 (5%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
+V E++ +L+DI+H ++G + R +A + L+ H+ IIHRD+KPA
Sbjct: 93 IVMEYVDGVTLRDIVH--TEG-----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA 145
Query: 385 NVLIDDGMEARISDFGLAKLMPD-GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSF 443
N++I ++ DFG+A+ + D G++ + V GT Y++PE + ++ +SD+YS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 444 GVLLAVLVVGKFPF 457
G +L ++ G+ PF
Sbjct: 206 GCVLYEVLTGEPPF 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 77/134 (57%), Gaps = 8/134 (5%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
+V E++ +L+DI+H ++G + R +A + L+ H+ IIHRD+KPA
Sbjct: 93 IVMEYVDGVTLRDIVH--TEG-----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA 145
Query: 385 NVLIDDGMEARISDFGLAKLMPD-GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSF 443
N++I ++ DFG+A+ + D G++ + V GT Y++PE + ++ +SD+YS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 444 GVLLAVLVVGKFPF 457
G +L ++ G+ PF
Sbjct: 206 GCVLYEVLTGEPPF 219
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 138/317 (43%), Gaps = 50/317 (15%)
Query: 216 PAICARPIFKKRDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGK--MIAIKKIDQP 273
P + ++P A+ +SL + +G G G V+ A +Y K +A+K +
Sbjct: 168 PCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMA----TYNKHTKVAVKTMKPG 223
Query: 274 PMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNG 333
M+ L V M+ ++ H L+ L A VT+ +++ EFM G
Sbjct: 224 SMSVEAFLAEANV-----MKTLQ----------HDKLVKLHAVVTKEPIYIIT-EFMAKG 267
Query: 334 SLQDILHDVSQGRRELDWLARY--RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
SL D L ++ L L + +IA GMA + IHRD++ AN+L+
Sbjct: 268 SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA-------FIEQRNYIHRDLRAANILVSAS 320
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLV 451
+ +I+DFGLA+++ D R + APE + + KSD++SFG+LL +V
Sbjct: 321 LVCKIADFGLARVIEDNEYTAR-EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 379
Query: 452 V-GKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCT 510
G+ P+ ++R + P N EE ++++ C
Sbjct: 380 TYGRIPYPGM----SNPEVIRALERGYRMPRPE---------NCPEELYNIMMR----CW 422
Query: 511 SDDPEERPSSKDVRCML 527
+ PEERP+ + ++ +L
Sbjct: 423 KNRPEERPTFEYIQSVL 439
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 111/224 (49%), Gaps = 25/224 (11%)
Query: 242 EIIGVGACGVVY--KAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
++IGVG G V + +VPG +AIK ++ +++ R SE
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIK-------------TLKAGYTDKQRRDFLSEA 81
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIAR 359
G+ H N++ L+ VT+ +++ E+M+NGSL L + GR + L + R
Sbjct: 82 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK-NDGRFTVIQLVG--MLR 138
Query: 360 GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAG 419
G+ SG++YL +HRD+ N+L++ + ++SDFG+++++ D TT G
Sbjct: 139 GIGSGMKYLSDMS---AVHRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGG 194
Query: 420 TTG--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDF 460
+ APE + SD++S+G+++ V+ G+ P+ D
Sbjct: 195 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 238
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 111/224 (49%), Gaps = 25/224 (11%)
Query: 242 EIIGVGACGVVY--KAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
++IGVG G V + +VPG +AIK ++ +++ R SE
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIK-------------TLKAGYTDKQRRDFLSEA 66
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIAR 359
G+ H N++ L+ VT+ +++ E+M+NGSL L + GR + L + R
Sbjct: 67 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK-NDGRFTVIQLVG--MLR 123
Query: 360 GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAG 419
G+ SG++YL +HRD+ N+L++ + ++SDFG+++++ D TT G
Sbjct: 124 GIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGG 179
Query: 420 TTG--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDF 460
+ APE + SD++S+G+++ V+ G+ P+ D
Sbjct: 180 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 223
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 27/223 (12%)
Query: 243 IIGVGACGVVY--KAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
+IG G G V + ++PG +AIK + + TE ++ R E
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLK---VGYTE----------KQRRDFLCEAS 96
Query: 301 TAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRELDWLARYRIA 358
G+ H N++ L+ VTR ++V EFM+NG+L L HD + + +
Sbjct: 97 IMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHD-----GQFTVIQLVGML 151
Query: 359 RGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVA 418
RG+A+G+ YL +HRD+ N+L++ + ++SDFGL++++ D + TT
Sbjct: 152 RGIAAGMRYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGG 208
Query: 419 G-TTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDD 459
+ APE Q + SD++S+G+++ V+ G+ P+ D
Sbjct: 209 KIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 251
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G + K I D + A +++ +L + ++ EI + H++++
Sbjct: 28 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 87
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D +V E + SL + LH + E + ARY + R + G +YLH R +IH
Sbjct: 88 DNDFVFVVLELCRRRSLLE-LHKRRKALTEPE--ARYYL-RQIVLGCQYLH---RNRVIH 140
Query: 379 RDIKPANVLIDDGMEARISDFGLA-KLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RD+K N+ +++ +E +I DFGLA K+ DG R T+ GT Y+APE S +
Sbjct: 141 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 438 SDIYSFGVLLAVLVVGKFPFD 458
D++S G ++ L+VGK PF+
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFE 218
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 225 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 271
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E++ + +A ++S
Sbjct: 272 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 326
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHR++ N L+ + +++DFGL++LM G T +
Sbjct: 327 AMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 382
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 383 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 427
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 111/224 (49%), Gaps = 25/224 (11%)
Query: 242 EIIGVGACGVVY--KAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
++IGVG G V + +VPG +AIK ++ +++ R SE
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIK-------------TLKAGYTDKQRRDFLSEA 60
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIAR 359
G+ H N++ L+ VT+ +++ E+M+NGSL L + GR + L + R
Sbjct: 61 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK-NDGRFTVIQLVG--MLR 117
Query: 360 GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAG 419
G+ SG++YL +HRD+ N+L++ + ++SDFG+++++ D TT G
Sbjct: 118 GIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGG 173
Query: 420 TTG--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDF 460
+ APE + SD++S+G+++ V+ G+ P+ D
Sbjct: 174 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 217
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 132/296 (44%), Gaps = 42/296 (14%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
+ ++G GA G V KA + AIKKI + +L+ +L + + +
Sbjct: 11 IAVLGQGAFGQVVKARNALD-SRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVR--Y 67
Query: 301 TAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILH--DVSQGRRELDWLARYRIA 358
A + RN + V + + E+ +N +L D++H +++Q R E +R+
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY-----WRLF 122
Query: 359 RGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK--------LMPDGH- 409
R + L Y+H IIHR++KP N+ ID+ +I DFGLAK L D
Sbjct: 123 RQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 410 ---TRIRITTVAGTTGYVAPE-YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTE 465
+ +T+ GT YVA E T +EK D YS G++ + +PF E
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFS---TGXE 233
Query: 466 EMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSK 521
+N+++ +R+V S E P D+K ++ KI DP +RP ++
Sbjct: 234 RVNILKKLRSV-SIEFPPDFDDNK---------XKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 307 HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY--RIARGMASG 364
H L+ L A VT+ + ++ EFM GSL D L G+ L L + +IA GMA
Sbjct: 66 HDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA-- 123
Query: 365 LEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYV 424
Y+ R IHRD++ ANVL+ + + +I+DFGLA+++ D R +
Sbjct: 124 --YIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR-EGAKFPIKWT 177
Query: 425 APEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
APE + KS+++SFG+LL ++ GK P+
Sbjct: 178 APEAINFGCFTIKSNVWSFGILLYEIVTYGKIPY 211
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 25/229 (10%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
L IG G+ G K S GK++ K++D M E +++L+ SE+
Sbjct: 11 LYTIGTGSYGRCQKIRRK-SDGKILVWKELDYGSMTEAE----KQMLV--------SEVN 57
Query: 301 TAGRIWHRNLLPLQAHVT-RPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIA 358
+ H N++ + R + L +V E+ + G L + +++G +E +L +
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASV---ITKGTKERQYLDEEFVL 114
Query: 359 RGMASGLEYLHMYHRP-----CIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIR 413
R M L HR ++HRD+KPANV +D ++ DFGLA+++ H
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSF 172
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQ 462
GT Y++PE ++ +EKSDI+S G LL L PF F Q
Sbjct: 173 AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ 221
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 25/199 (12%)
Query: 262 GKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPD 321
GK +A+K ID+ + ++ L + R E+ + H N++ L +
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFR------------EVRIMKVLNHPNIVKLFEVIETEK 86
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGR-RELDWLARYRIARGMASGLEYLHMYHRPCIIHRD 380
LV E+ G + D L V+ GR +E + A++R + S ++Y H + I+HRD
Sbjct: 87 TLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFR---QIVSAVQYCH---QKFIVHRD 138
Query: 381 IKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-SEKSD 439
+K N+L+D M +I+DFG + G+ ++ T G+ Y APE Q + D
Sbjct: 139 LKAENLLLDADMNIKIADFGFSNEFTFGN---KLDTFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 440 IYSFGVLLAVLVVGKFPFD 458
++S GV+L LV G PFD
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G + K I D + A +++ +L + ++ EI + H++++
Sbjct: 28 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 87
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D +V E + SL + LH + E + ARY + R + G +YLH R +IH
Sbjct: 88 DNDFVFVVLELCRRRSLLE-LHKRRKALTEPE--ARYYL-RQIVLGCQYLH---RNRVIH 140
Query: 379 RDIKPANVLIDDGMEARISDFGLA-KLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RD+K N+ +++ +E +I DFGLA K+ DG R T+ GT Y+APE S +
Sbjct: 141 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 438 SDIYSFGVLLAVLVVGKFPFD 458
D++S G ++ L+VGK PF+
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFE 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G + K I D + A +++ +L + ++ EI + H++++
Sbjct: 32 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 91
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D +V E + SL + LH + E + ARY + R + G +YLH R +IH
Sbjct: 92 DNDFVFVVLELCRRRSLLE-LHKRRKALTEPE--ARYYL-RQIVLGCQYLH---RNRVIH 144
Query: 379 RDIKPANVLIDDGMEARISDFGLA-KLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RD+K N+ +++ +E +I DFGLA K+ DG R T+ GT Y+APE S +
Sbjct: 145 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKTLCGTPNYIAPEVLSKKGHSFE 201
Query: 438 SDIYSFGVLLAVLVVGKFPFD 458
D++S G ++ L+VGK PF+
Sbjct: 202 VDVWSIGCIMYTLLVGKPPFE 222
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 25/199 (12%)
Query: 262 GKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPD 321
G+ +A+K ID+ + T L + R E+ + H N++ L +
Sbjct: 40 GREVAVKIIDKTQLNPTSLQKLFR------------EVRIMKILNHPNIVKLFEVIETEK 87
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGR-RELDWLARYRIARGMASGLEYLHMYHRPCIIHRD 380
LV E+ G + D L V+ GR +E + A++R + S ++Y H + I+HRD
Sbjct: 88 TLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFR---QIVSAVQYCHQKY---IVHRD 139
Query: 381 IKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-SEKSD 439
+K N+L+D M +I+DFG + G+ ++ T G+ Y APE Q + D
Sbjct: 140 LKAENLLLDGDMNIKIADFGFSNEFTVGN---KLDTFCGSPPYAAPELFQGKKYDGPEVD 196
Query: 440 IYSFGVLLAVLVVGKFPFD 458
++S GV+L LV G PFD
Sbjct: 197 VWSLGVILYTLVSGSLPFD 215
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 25/199 (12%)
Query: 262 GKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPD 321
GK +A+K ID+ + ++ L + R E+ + H N++ L +
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFR------------EVRIMKVLNHPNIVKLFEVIETEK 86
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGR-RELDWLARYRIARGMASGLEYLHMYHRPCIIHRD 380
LV E+ G + D L V+ GR +E + A++R + S ++Y H + I+HRD
Sbjct: 87 TLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFR---QIVSAVQYCH---QKFIVHRD 138
Query: 381 IKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-SEKSD 439
+K N+L+D M +I+DFG + G+ ++ T G+ Y APE Q + D
Sbjct: 139 LKAENLLLDADMNIKIADFGFSNEFTFGN---KLDTFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 440 IYSFGVLLAVLVVGKFPFD 458
++S GV+L LV G PFD
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 25/229 (10%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
L IG G+ G K S GK++ K++D M E +++L+ SE+
Sbjct: 11 LYTIGTGSYGRCQKIRRK-SDGKILVWKELDYGSMTEAE----KQMLV--------SEVN 57
Query: 301 TAGRIWHRNLLPLQAHVT-RPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIA 358
+ H N++ + R + L +V E+ + G L + +++G +E +L +
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASV---ITKGTKERQYLDEEFVL 114
Query: 359 RGMASGLEYLHMYHRP-----CIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIR 413
R M L HR ++HRD+KPANV +D ++ DFGLA+++ H
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDEDF 172
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQ 462
GT Y++PE ++ +EKSDI+S G LL L PF F Q
Sbjct: 173 AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ 221
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 77/134 (57%), Gaps = 8/134 (5%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
+V E++ +L+DI+H ++G + R +A + L+ H+ IIHRD+KPA
Sbjct: 110 IVMEYVDGVTLRDIVH--TEG-----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPA 162
Query: 385 NVLIDDGMEARISDFGLAKLMPD-GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSF 443
N++I ++ DFG+A+ + D G++ + V GT Y++PE + ++ +SD+YS
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 444 GVLLAVLVVGKFPF 457
G +L ++ G+ PF
Sbjct: 223 GCVLYEVLTGEPPF 236
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 103/225 (45%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 228 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 274
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E+ + +A ++S
Sbjct: 275 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISS 329
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHR++ N L+ + +++DFGL++LM G T +
Sbjct: 330 AMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 385
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 386 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 430
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY+ V Y +A+K + + M E L V M++IK
Sbjct: 267 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 313
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L TR ++ EFM G+L D L + + R+E++ + +A ++S
Sbjct: 314 ---HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISS 368
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHR++ N L+ + +++DFGL++LM G T +
Sbjct: 369 AMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 424
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL---AVLVVGKFPFDDFFQYTE 465
APE S KSD+++FGVLL A + +P D Q E
Sbjct: 425 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 469
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 43/293 (14%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
L E+ LE IG G+ G V+K + K++AIK ID + + +
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV--- 58
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELD 350
+ Q S +T ++ + L D L ++ E++ GS D+L LD
Sbjct: 59 LSQCDSPYVTK---YYGSYLK--------DTKLWIIMEYLGGGSALDLLEP-----GPLD 102
Query: 351 WLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHT 410
I R + GL+YLH + IHRDIK ANVL+ + E +++DFG+A + D T
Sbjct: 103 ETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--T 157
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMV 470
+I+ GT ++APE + K+DI+S G+ L G+ P + M ++
Sbjct: 158 QIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL----HPMKVL 213
Query: 471 RWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
+I NP L GN Y + ++ ++ C + +P RP++K++
Sbjct: 214 F----LIPKNNP-----PTLEGN-YSKPLKEFVEA---CLNKEPSFRPTAKEL 253
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 44/288 (15%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
K + + L+ +G G GVV + G Y +A+K I + M+ E
Sbjct: 6 KREEITLLKELGSGQFGVVKLGKWKGQYD--VAVKMIKEGSMSEDEFFQ----------- 52
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
E T ++ H L+ ++ +V E++ NG L + L +G L
Sbjct: 53 ----EAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLE 108
Query: 354 R-YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
Y + GMA +L + IHRD+ N L+D + ++SDFG+ + + D
Sbjct: 109 MCYDVCEGMA----FLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS 161
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDFFQYTEEMNMVR 471
+ T + APE S KSD+++FG+L+ V +GK P+D + + + +
Sbjct: 162 SVGT-KFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQ 220
Query: 472 WMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPS 519
R PH A D+ + +I Y C + PE+RP+
Sbjct: 221 GHRLY----RPHLASDT-------------IYQIMYSCWHELPEKRPT 251
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 25/199 (12%)
Query: 262 GKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPD 321
GK +A++ ID+ + ++ L + R E+ + H N++ L +
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFR------------EVRIMKVLNHPNIVKLFEVIETEK 86
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGR-RELDWLARYRIARGMASGLEYLHMYHRPCIIHRD 380
LV E+ G + D L V+ GR +E + A++R + S ++Y H + I+HRD
Sbjct: 87 TLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFR---QIVSAVQYCH---QKFIVHRD 138
Query: 381 IKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-SEKSD 439
+K N+L+D M +I+DFG + G+ ++ T G+ Y APE Q + D
Sbjct: 139 LKAENLLLDADMNIKIADFGFSNEFTFGN---KLDTFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 440 IYSFGVLLAVLVVGKFPFD 458
++S GV+L LV G PFD
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 30/219 (13%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G GA +VY+ + G+ Q P A L V + +++K+ +++EI
Sbjct: 61 LGRGATSIVYRCKQKGT-----------QKPYA----LKVLKKTVDKKI--VRTEIGVLL 103
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
R+ H N++ L+ P LV E + G L D + V +G + + A +
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRI--VEKG-----YYSERDAADAVKQ 156
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDD---GMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H I+HRD+KP N+L +I+DFGL+K++ ++ + TV GT
Sbjct: 157 ILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGT 213
Query: 421 TGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD 459
GY APE + + D++S G++ +L+ G PF D
Sbjct: 214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD 252
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G + K I D + A +++ +L + ++ EI + H++++
Sbjct: 26 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 85
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D +V E + SL + LH + E + ARY + R + G +YLH R +IH
Sbjct: 86 DNDFVFVVLELCRRRSLLE-LHKRRKALTEPE--ARYYL-RQIVLGCQYLH---RNRVIH 138
Query: 379 RDIKPANVLIDDGMEARISDFGLA-KLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RD+K N+ +++ +E +I DFGLA K+ DG R + GT Y+APE S +
Sbjct: 139 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKVLCGTPNYIAPEVLSKKGHSFE 195
Query: 438 SDIYSFGVLLAVLVVGKFPFD 458
D++S G ++ L+VGK PF+
Sbjct: 196 VDVWSIGCIMYTLLVGKPPFE 216
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 307 HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY--RIARGMASG 364
H L+ L A VT+ +++ EFM GSL D L ++ L L + +IA GMA
Sbjct: 69 HDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA-- 125
Query: 365 LEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYV 424
+ IHRD++ AN+L+ + +I+DFGLA+++ D R +
Sbjct: 126 -----FIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR-EGAKFPIKWT 179
Query: 425 APEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENPH 483
APE + + KSD++SFG+LL +V G+ P+ ++R + P
Sbjct: 180 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM----SNPEVIRALERGYRMPRPE 235
Query: 484 RAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
N EE ++++ C + PEERP+ + ++ +L
Sbjct: 236 ---------NCPEELYNIMMR----CWKNRPEERPTFEYIQSVL 266
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 130/297 (43%), Gaps = 57/297 (19%)
Query: 235 EDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQ 294
E+ LE IG G+ G V+K + +++AIK ID + + + + Q
Sbjct: 22 EELFTKLERIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITV---LSQ 77
Query: 295 IKSEIIT--------AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGR 346
S +T ++W ++ E++ GS D+L
Sbjct: 78 CDSSYVTKYYGSYLKGSKLW------------------IIMEYLGGGSALDLLR-----A 114
Query: 347 RELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMP 406
D + + + GL+YLH + IHRDIK ANVL+ + + +++DFG+A +
Sbjct: 115 GPFDEFQIATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLT 171
Query: 407 DGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEE 466
D T+I+ T GT ++APE Q K+DI+S G+ L G+ P D
Sbjct: 172 D--TQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSD------- 222
Query: 467 MNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
M+ +R + +I NP L+G+ + + + + C + DP RP++K++
Sbjct: 223 MHPMRVLF-LIPKNNP-----PTLVGD-FTKSFKEFIDA---CLNKDPSFRPTAKEL 269
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 114/246 (46%), Gaps = 44/246 (17%)
Query: 225 KKRDIAFLT--------KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMA 276
+KR AFLT K+D + +G G GVV+K + P
Sbjct: 6 RKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK---------------VSHKPSG 50
Query: 277 ATELLNVRRVLINRKMR-QIKSEIITAGRIWHRNLLPL-----QAHVTRPDCHLLVYEFM 330
L + R LI+ +++ I+++II ++ H P A + + + + E M
Sbjct: 51 ----LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHM 105
Query: 331 KNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDD 390
GSL +L GR L + IA + GL YL H+ I+HRD+KP+N+L++
Sbjct: 106 DGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNILVNS 159
Query: 391 GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVL 450
E ++ DFG++ + D + GT Y++PE Q S +SDI+S G+ L +
Sbjct: 160 RGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 215
Query: 451 VVGKFP 456
VG++P
Sbjct: 216 AVGRYP 221
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 43/290 (14%)
Query: 235 EDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQ 294
E+ LE IG G+ G V+K + K++AIK ID + + + + Q
Sbjct: 21 EELFTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV---LSQ 76
Query: 295 IKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDWLA 353
S +T ++ + L D L ++ E++ GS D+L LD
Sbjct: 77 CDSPYVTK---YYGSYLK--------DTKLWIIMEYLGGGSALDLLEP-----GPLDETQ 120
Query: 354 RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIR 413
I R + GL+YLH + IHRDIK ANVL+ + E +++DFG+A + D T+I+
Sbjct: 121 IATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIK 175
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWM 473
GT ++APE + K+DI+S G+ L G+ P + M ++
Sbjct: 176 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL----HPMKVLF-- 229
Query: 474 RNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
+I NP L GN Y + ++ ++ C + +P RP++K++
Sbjct: 230 --LIPKNNP-----PTLEGN-YSKPLKEFVEA---CLNKEPSFRPTAKEL 268
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 28/225 (12%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIK--KIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
++IG G VV + V + G A+K ++ ++ +L VR R+ I ++
Sbjct: 100 DVIGRGVSSVVRRC-VHRATGHEFAVKIMEVTAERLSPEQLEEVREA--TRRETHILRQV 156
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHD-VSQGRRELDWLARYRIA 358
AG H +++ L LV++ M+ G L D L + V+ +E I
Sbjct: 157 --AG---HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKET-----RSIM 206
Query: 359 RGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVA 418
R + + +LH + I+HRD+KP N+L+DD M+ R+SDFG + + G ++ +
Sbjct: 207 RSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE---KLRELC 260
Query: 419 GTTGYVAPEYHQTLT------ISEKSDIYSFGVLLAVLVVGKFPF 457
GT GY+APE + ++ D+++ GV+L L+ G PF
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 236 DSLASLEI---IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKM 292
++LA+ I IG G VY+A G +A+KK+ ++ + L++ K
Sbjct: 29 NTLANFRIEKKIGRGQFSEVYRAACLLD-GVPVALKKV--------QIFD----LMDAKA 75
Query: 293 R-QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDW 351
R EI ++ H N++ A + +V E G L ++ + +R +
Sbjct: 76 RADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPE 135
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTR 411
++ + S LE++H ++HRDIKPANV I ++ D GL + T
Sbjct: 136 RTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA 192
Query: 412 IRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVR 471
++ GT Y++PE + KSDI+S G LL + + PF Y ++MN+
Sbjct: 193 AH--SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF-----YGDKMNLYS 245
Query: 472 WMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERP 518
+ + + P L + Y E++R ++ + C + DPE+RP
Sbjct: 246 LCKKIEQCDYP------PLPSDHYSEELRQLVNM---CINPDPEKRP 283
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 114/246 (46%), Gaps = 44/246 (17%)
Query: 225 KKRDIAFLT--------KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMA 276
+KR AFLT K+D + +G G GVV+K + P
Sbjct: 14 RKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK---------------VSHKPSG 58
Query: 277 ATELLNVRRVLINRKMR-QIKSEIITAGRIWHRNLLPL-----QAHVTRPDCHLLVYEFM 330
L + R LI+ +++ I+++II ++ H P A + + + + E M
Sbjct: 59 ----LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHM 113
Query: 331 KNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDD 390
GSL +L GR L + IA + GL YL H+ I+HRD+KP+N+L++
Sbjct: 114 DGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNILVNS 167
Query: 391 GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVL 450
E ++ DFG++ + D + GT Y++PE Q S +SDI+S G+ L +
Sbjct: 168 RGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 223
Query: 451 VVGKFP 456
VG++P
Sbjct: 224 AVGRYP 229
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G + K I D + A +++ +L + ++ EI + H++++
Sbjct: 50 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 109
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D +V E + SL + LH + E + ARY + R + G +YLH R +IH
Sbjct: 110 DNDFVFVVLELCRRRSLLE-LHKRRKALTEPE--ARYYL-RQIVLGCQYLH---RNRVIH 162
Query: 379 RDIKPANVLIDDGMEARISDFGLA-KLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RD+K N+ +++ +E +I DFGLA K+ DG R + GT Y+APE S +
Sbjct: 163 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKVLCGTPNYIAPEVLSKKGHSFE 219
Query: 438 SDIYSFGVLLAVLVVGKFPFD 458
D++S G ++ L+VGK PF+
Sbjct: 220 VDVWSIGCIMYTLLVGKPPFE 240
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 27/239 (11%)
Query: 224 FKKRDIAFLTK--EDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELL 281
KK D LTK E+ LE +G G+ G VYKA + G+++AIK+
Sbjct: 15 LKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKA-IHKETGQIVAIKQ------------ 61
Query: 282 NVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHD 341
V + +++I EI + +++ + +V E+ GS+ DI+
Sbjct: 62 ----VPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL 117
Query: 342 VSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGL 401
++ E D +A I + GLEYLH + IHRDIK N+L++ A+++DFG+
Sbjct: 118 RNKTLTE-DEIAT--ILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGV 171
Query: 402 AKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDF 460
A + D + V GT ++APE Q + + +DI+S G+ + GK P+ D
Sbjct: 172 AGQLTDXMA--KRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI 228
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 114/247 (46%), Gaps = 44/247 (17%)
Query: 225 KKRDIAFLT--------KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMA 276
+KR AFLT K+D + +G G GVV+K + P
Sbjct: 49 RKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK---------------VSHKPSG 93
Query: 277 ATELLNVRRVLINRKMRQ-IKSEIITAGRIWHRNLLPL-----QAHVTRPDCHLLVYEFM 330
L + R LI+ +++ I+++II ++ H P A + + + + E M
Sbjct: 94 ----LVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM-EHM 148
Query: 331 KNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDD 390
GSL +L GR L + IA + GL YL H+ I+HRD+KP+N+L++
Sbjct: 149 DGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSNILVNS 202
Query: 391 GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVL 450
E ++ DFG++ + D + GT Y++PE Q S +SDI+S G+ L +
Sbjct: 203 RGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 258
Query: 451 VVGKFPF 457
VG++P
Sbjct: 259 AVGRYPI 265
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G + K I D + A +++ +L + ++ EI + H++++
Sbjct: 52 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 111
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D +V E + SL + LH + E + ARY + R + G +YLH R +IH
Sbjct: 112 DNDFVFVVLELCRRRSLLE-LHKRRKALTEPE--ARYYL-RQIVLGCQYLH---RNRVIH 164
Query: 379 RDIKPANVLIDDGMEARISDFGLA-KLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RD+K N+ +++ +E +I DFGLA K+ DG R + GT Y+APE S +
Sbjct: 165 RDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 438 SDIYSFGVLLAVLVVGKFPFD 458
D++S G ++ L+VGK PF+
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFE 242
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G + K I +D + A +++ +L + ++ +EI + + +++
Sbjct: 53 GGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFE 112
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D +V E + SL + LH + E + ARY R G++YLH +IH
Sbjct: 113 DDDFVYVVLEICRRRSLLE-LHKRRKAVTEPE--ARY-FMRQTIQGVQYLHNNR---VIH 165
Query: 379 RDIKPANVLIDDGMEARISDFGLA-KLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RD+K N+ ++D M+ +I DFGLA K+ DG R T+ GT Y+APE S +
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKTLCGTPNYIAPEVLCKKGHSFE 222
Query: 438 SDIYSFGVLLAVLVVGKFPFD 458
DI+S G +L L+VGK PF+
Sbjct: 223 VDIWSLGCILYTLLVGKPPFE 243
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 26 LGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVM--KKLR---------- 71
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H L+ L A V+ ++++ E+M GSL D L L L +A +AS
Sbjct: 72 ---HEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ Y+ R +HRD++ AN+L+ + + +++DFGLA+L+ D R +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTAR-QGAKFPIKW 181
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENP 482
APE + KSD++SFG+LL L G+ P+ + R R E P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 241
Query: 483 HRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
D + C DPEERP+ + ++ L
Sbjct: 242 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 269
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 25/199 (12%)
Query: 262 GKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPD 321
GK +A+K ID+ + ++ L + R E+ + H N++ L +
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFR------------EVRIMKVLNHPNIVKLFEVIETEK 86
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGR-RELDWLARYRIARGMASGLEYLHMYHRPCIIHRD 380
LV E+ G + D L V+ GR +E + A++R + S ++Y H + I+HRD
Sbjct: 87 TLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFR---QIVSAVQYCH---QKFIVHRD 138
Query: 381 IKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-SEKSD 439
+K N+L+D M +I+DFG + G+ ++ G Y APE Q + D
Sbjct: 139 LKAENLLLDADMNIKIADFGFSNEFTFGN---KLDAFCGAPPYAAPELFQGKKYDGPEVD 195
Query: 440 IYSFGVLLAVLVVGKFPFD 458
++S GV+L LV G PFD
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 23/215 (10%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G VY V Y +A+K + + M E L V M++IK
Sbjct: 40 LGGGQYGEVYVG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAV-----MKEIK------- 86
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H NL+ L T +V E+M G+L D L + + R E+ + +A ++S
Sbjct: 87 ---HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECN--REEVTAVVLLYMATQISS 141
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
+EYL + IHRD+ N L+ + +++DFGL++LM G T +
Sbjct: 142 AMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKW 197
Query: 424 VAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
APE T S KSD+++FGVLL + G P+
Sbjct: 198 TAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 71 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 120
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 121 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 177
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R TT+ GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 178 S----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G + L +S+ D
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQR 114
Query: 354 RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIR 413
+A+ L Y H +IHRDIKP N+L+ E +I+DFG + P R
Sbjct: 115 TATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 167
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
TT+ GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 168 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 26 LGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVM--KKLR---------- 71
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H L+ L A V+ ++++ E+M GSL D L L L +A +AS
Sbjct: 72 ---HEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ Y+ R +HRD++ AN+L+ + + +++DFGLA+L+ D R +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKW 181
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENP 482
APE + KSD++SFG+LL L G+ P+ + R R E P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 241
Query: 483 HRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
D + C DPEERP+ + ++ L
Sbjct: 242 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 25/199 (12%)
Query: 262 GKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPD 321
GK +A+K ID+ + ++ L + R E+ + H N++ L +
Sbjct: 32 GKEVAVKIIDKTQLNSSSLQKLFR------------EVRIMKVLNHPNIVKLFEVIETEK 79
Query: 322 CHLLVYEFMKNGSLQDILHDVSQG-RRELDWLARYRIARGMASGLEYLHMYHRPCIIHRD 380
LV E+ G + D L V+ G +E + A++R + S ++Y H + I+HRD
Sbjct: 80 TLYLVMEYASGGEVFDYL--VAHGWMKEKEARAKFR---QIVSAVQYCH---QKFIVHRD 131
Query: 381 IKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-SEKSD 439
+K N+L+D M +I+DFG + G+ ++ T G+ Y APE Q + D
Sbjct: 132 LKAENLLLDADMNIKIADFGFSNEFTFGN---KLDTFCGSPPYAAPELFQGKKYDGPEVD 188
Query: 440 IYSFGVLLAVLVVGKFPFD 458
++S GV+L LV G PFD
Sbjct: 189 VWSLGVILYTLVSGSLPFD 207
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 129
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 130 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 186
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R TT+ GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 187 S----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 104
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 105 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPS 161
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R TT++GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 162 S----RRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 108
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 109 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 165
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R TT+ GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 166 S----RRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 321 DCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRD 380
D LV M G L+ H G+ A + GLE LH R I++RD
Sbjct: 257 DALCLVLTLMNGGDLK--FHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRD 311
Query: 381 IKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDI 440
+KP N+L+DD RISD GLA +P+G T I GT GY+APE + + D
Sbjct: 312 LKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDW 368
Query: 441 YSFGVLLAVLVVGKFPF 457
++ G LL ++ G+ PF
Sbjct: 369 WALGCLLYEMIAGQSPF 385
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 106
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 107 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 163
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R TT+ GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 164 S----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 321 DCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRD 380
D LV M G L+ H G+ A + GLE LH R I++RD
Sbjct: 257 DALCLVLTLMNGGDLK--FHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRD 311
Query: 381 IKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDI 440
+KP N+L+DD RISD GLA +P+G T I GT GY+APE + + D
Sbjct: 312 LKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDW 368
Query: 441 YSFGVLLAVLVVGKFPF 457
++ G LL ++ G+ PF
Sbjct: 369 WALGCLLYEMIAGQSPF 385
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 25/199 (12%)
Query: 262 GKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPD 321
GK +A++ ID+ + ++ L + R E+ + H N++ L +
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFR------------EVRIMKVLNHPNIVKLFEVIETEK 86
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGR-RELDWLARYRIARGMASGLEYLHMYHRPCIIHRD 380
LV E+ G + D L V+ GR +E + A++R + S ++Y H + I+HRD
Sbjct: 87 TLYLVMEYASGGEVFDYL--VAHGRMKEKEARAKFR---QIVSAVQYCH---QKFIVHRD 138
Query: 381 IKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-SEKSD 439
+K N+L+D M +I+DFG + G+ ++ G+ Y APE Q + D
Sbjct: 139 LKAENLLLDADMNIKIADFGFSNEFTFGN---KLDEFCGSPPYAAPELFQGKKYDGPEVD 195
Query: 440 IYSFGVLLAVLVVGKFPFD 458
++S GV+L LV G PFD
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 192 LGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVM--KKLR---------- 237
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H L+ L A V+ ++ V E+M GSL D L + L L +A +AS
Sbjct: 238 ---HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIAS 291
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ Y+ R +HRD++ AN+L+ + + +++DFGLA+L+ D R +
Sbjct: 292 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKW 347
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENP 482
APE + KSD++SFG+LL L G+ P+ + R R E P
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 407
Query: 483 HRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
D + C +PEERP+ + ++ L
Sbjct: 408 ESLHD-----------------LMCQCWRKEPEERPTFEYLQAFL 435
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 108
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 109 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 165
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R TT+ GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 166 S----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G++ I+ A ++L V+ +++ E + + H ++ +
Sbjct: 17 GSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ 76
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
++ ++++ G L +L + +R + +A++ A + LEYLH II+
Sbjct: 77 DAQQIFMIMDYIEGGELFSLLR---KSQRFPNPVAKFYAAE-VCLALEYLH---SKDIIY 129
Query: 379 RDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS 438
RD+KP N+L+D +I+DFG AK +PD + GT Y+APE T ++
Sbjct: 130 RDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDYIAPEVVSTKPYNKSI 184
Query: 439 DIYSFGVLLAVLVVGKFPFDD 459
D +SFG+L+ ++ G PF D
Sbjct: 185 DWWSFGILIYEMLAGYTPFYD 205
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 192 LGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVM--KKLR---------- 237
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H L+ L A V+ ++ V E+M GSL D L + L L +A +AS
Sbjct: 238 ---HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIAS 291
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ Y+ R +HRD++ AN+L+ + + +++DFGLA+L+ D R +
Sbjct: 292 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKW 347
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENP 482
APE + KSD++SFG+LL L G+ P+ + R R E P
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 407
Query: 483 HRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
D + C +PEERP+ + ++ L
Sbjct: 408 ESLHD-----------------LMCQCWRKEPEERPTFEYLQAFL 435
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 25/199 (12%)
Query: 262 GKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPD 321
G+ +AIK ID+ + T L + R E+ + H N++ L +
Sbjct: 37 GREVAIKIIDKTQLNPTSLQKLFR------------EVRIMKILNHPNIVKLFEVIETEK 84
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGR-RELDWLARYRIARGMASGLEYLHMYHRPCIIHRD 380
L+ E+ G + D L V+ GR +E + +++R + S ++Y H I+HRD
Sbjct: 85 TLYLIMEYASGGEVFDYL--VAHGRMKEKEARSKFR---QIVSAVQYCHQKR---IVHRD 136
Query: 381 IKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-SEKSD 439
+K N+L+D M +I+DFG + G ++ T G+ Y APE Q + D
Sbjct: 137 LKAENLLLDADMNIKIADFGFSNEFTVGG---KLDTFCGSPPYAAPELFQGKKYDGPEVD 193
Query: 440 IYSFGVLLAVLVVGKFPFD 458
++S GV+L LV G PFD
Sbjct: 194 VWSLGVILYTLVSGSLPFD 212
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 119/285 (41%), Gaps = 42/285 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 15 LGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVM--KKLR---------- 60
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H L+ L A V+ ++ V E+M GSL D L L L +A +AS
Sbjct: 61 ---HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 114
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ Y+ R +HRD++ AN+L+ + + +++DFGLA+L+ D R +
Sbjct: 115 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKW 170
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENP 482
APE + KSD++SFG+LL L G+ P+ + R R E P
Sbjct: 171 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 230
Query: 483 HRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
D + C DPEERP+ + ++ L
Sbjct: 231 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 258
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 119/285 (41%), Gaps = 42/285 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 26 LGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVM--KKLR---------- 71
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H L+ L A V+ ++ V E+M GSL D L L L +A +AS
Sbjct: 72 ---HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ Y+ R +HRD++ AN+L+ + + +++DFGLA+L+ D R +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKW 181
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENP 482
APE + KSD++SFG+LL L G+ P+ + R R E P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 241
Query: 483 HRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
D + C DPEERP+ + ++ L
Sbjct: 242 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 269
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 103
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 104 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 160
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R TT+ GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 161 S----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 119/285 (41%), Gaps = 42/285 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 26 LGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVM--KKLR---------- 71
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H L+ L A V+ ++ V E+M GSL D L L L +A +AS
Sbjct: 72 ---HEKLVQLYAVVSEEPIYI-VCEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ Y+ R +HRD++ AN+L+ + + +++DFGLA+L+ D R +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKW 181
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENP 482
APE + KSD++SFG+LL L G+ P+ + R R E P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 241
Query: 483 HRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
D + C DPEERP+ + ++ L
Sbjct: 242 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 269
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 290 RKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRR 347
++ R E G+ H N++ L+ VT+ ++V E+M+NGSL L HD
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----- 142
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+ + + RG+ASG++YL +HRD+ N+LI+ + ++SDFGLA+++ D
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLED 199
Query: 408 GHTRIRITTVAGTTG--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
TT G + +PE + SD++S+G++L V+ G+ P+
Sbjct: 200 -DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 10/133 (7%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
+ E M GSL +L + + E+ L + IA + GL YL H+ I+HRD+KP+
Sbjct: 91 ICMEHMDGGSLDQVLKEAKRIPEEI--LGKVSIA--VLRGLAYLREKHQ--IMHRDVKPS 144
Query: 385 NVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFG 444
N+L++ E ++ DFG++ + D + GT Y+APE Q S +SDI+S G
Sbjct: 145 NILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMAPERLQGTHYSVQSDIWSMG 200
Query: 445 VLLAVLVVGKFPF 457
+ L L VG++P
Sbjct: 201 LSLVELAVGRYPI 213
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQP---PMAATELLNVRRVLINRK--MRQIK 296
EI+G G VV + + K A+K ID +A E+ +R + +R++
Sbjct: 23 EILGRGVSSVVRRC-IHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 81
Query: 297 SEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYR 356
H N++ L+ LV++ MK G L D L E L+
Sbjct: 82 G---------HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-------TEKVTLSEKE 125
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITT 416
+ M + LE + H+ I+HRD+KP N+L+DD M +++DFG + + G ++ +
Sbjct: 126 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLRS 182
Query: 417 VAGTTGYVAPEYHQTLT------ISEKSDIYSFGVLLAVLVVGKFPF 457
V GT Y+APE + ++ D++S GV++ L+ G PF
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 119/285 (41%), Gaps = 42/285 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 17 LGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVM--KKLR---------- 62
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H L+ L A V+ ++ V E+M GSL D L L L +A +AS
Sbjct: 63 ---HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 116
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ Y+ R +HRD++ AN+L+ + + +++DFGLA+L+ D R +
Sbjct: 117 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKW 172
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENP 482
APE + KSD++SFG+LL L G+ P+ + R R E P
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 232
Query: 483 HRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
D + C DPEERP+ + ++ L
Sbjct: 233 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 260
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 19 LGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVM--KKLR---------- 64
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H L+ L A V+ ++ V E+M GSL D L + L L +A +AS
Sbjct: 65 ---HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIAS 118
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ Y+ R +HRD++ AN+L+ + + +++DFGLA+L+ D R +
Sbjct: 119 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKW 174
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENP 482
APE + KSD++SFG+LL L G+ P+ + R R E P
Sbjct: 175 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 234
Query: 483 HRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
D + C +PEERP+ + ++ L
Sbjct: 235 ESLHD-----------------LMCQCWRKEPEERPTFEYLQAFL 262
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 192 LGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVM--KKLR---------- 237
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H L+ L A V+ ++ V E+M GSL D L + L L +A +AS
Sbjct: 238 ---HEKLVQLYAVVSEEPIYI-VGEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIAS 291
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ Y+ R +HRD++ AN+L+ + + +++DFGLA+L+ D R +
Sbjct: 292 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKW 347
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENP 482
APE + KSD++SFG+LL L G+ P+ + R R E P
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 407
Query: 483 HRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
D + C +PEERP+ + ++ L
Sbjct: 408 ESLHD-----------------LMCQCWRKEPEERPTFEYLQAFL 435
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 119/285 (41%), Gaps = 42/285 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 26 LGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVM--KKIR---------- 71
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H L+ L A V+ ++ V E+M GSL D L L L +A +AS
Sbjct: 72 ---HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ Y+ R +HRD++ AN+L+ + + +++DFGLA+L+ D R +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKW 181
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENP 482
APE + KSD++SFG+LL L G+ P+ + R R E P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 241
Query: 483 HRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
D + C DPEERP+ + ++ L
Sbjct: 242 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 269
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 106
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 107 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 163
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R TT+ GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 164 S----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 290 RKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRR 347
++ R E G+ H N++ L+ VT+ ++V E+M+NGSL L HD
Sbjct: 59 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----- 113
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+ + + RG+ASG++YL +HRD+ N+LI+ + ++SDFGL++++ D
Sbjct: 114 QFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 170
Query: 408 GHTRIRITTVAGTTG--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
TT G + +PE + SD++S+G++L V+ G+ P+
Sbjct: 171 -DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 222
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 107
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 108 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 164
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R TT+ GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 165 S----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 26/223 (11%)
Query: 237 SLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIK 296
+++ EI+G G G V+K E + G +A K I M E ++K
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETAT-GLKLAAKIIKTRGMKDKE--------------EVK 134
Query: 297 SEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYR 356
+EI ++ H NL+ L + +LV E++ G L D + D S ELD +
Sbjct: 135 NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL--- 191
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLI--DDGMEARISDFGLAKLMPDGHTRIRI 414
+ + G+ ++H + I+H D+KP N+L D + +I DFGLA+ R ++
Sbjct: 192 FMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRY---KPREKL 245
Query: 415 TTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
GT ++APE +S +D++S GV+ +L+ G PF
Sbjct: 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 290 RKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRR 347
++ R E G+ H N++ L+ VT+ ++V E+M+NGSL L HD
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----- 142
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+ + + RG+ASG++YL +HRD+ N+LI+ + ++SDFGL++++ D
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 408 GHTRIRITTVAGTTG--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
TT G + +PE + SD++S+G++L V+ G+ P+
Sbjct: 200 -DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 53 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 102
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 103 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 159
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R TT+ GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 160 S----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 290 RKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRR 347
++ R E G+ H N++ L+ VT+ ++V E+M+NGSL L HD
Sbjct: 76 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----- 130
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+ + + RG+ASG++YL +HRD+ N+LI+ + ++SDFGL++++ D
Sbjct: 131 QFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 187
Query: 408 GHTRIRITTVAGTTG--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
TT G + +PE + SD++S+G++L V+ G+ P+
Sbjct: 188 -DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 239
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 51 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 100
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 101 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 157
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R TT+ GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 158 S----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 31/227 (13%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQP---PMAATELLNVRRVLINRK--MRQIK 296
EI+G G VV + + K A+K ID +A E+ +R + +R++
Sbjct: 10 EILGRGVSSVVRRC-IHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 68
Query: 297 SEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYR 356
H N++ L+ LV++ MK G L D L E L+
Sbjct: 69 G---------HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-------TEKVTLSEKE 112
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITT 416
+ M + LE + H+ I+HRD+KP N+L+DD M +++DFG + + G ++
Sbjct: 113 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLRE 169
Query: 417 VAGTTGYVAPEYHQTLT------ISEKSDIYSFGVLLAVLVVGKFPF 457
V GT Y+APE + ++ D++S GV++ L+ G PF
Sbjct: 170 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G + K I +D + A +++ +L + ++ +EI + + +++
Sbjct: 37 GGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFE 96
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D +V E + SL + LH + E + ARY R G++YLH +IH
Sbjct: 97 DDDFVYVVLEICRRRSLLE-LHKRRKAVTEPE--ARY-FMRQTIQGVQYLHNNR---VIH 149
Query: 379 RDIKPANVLIDDGMEARISDFGLA-KLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RD+K N+ ++D M+ +I DFGLA K+ DG R + GT Y+APE S +
Sbjct: 150 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKDLCGTPNYIAPEVLCKKGHSFE 206
Query: 438 SDIYSFGVLLAVLVVGKFPFD 458
DI+S G +L L+VGK PF+
Sbjct: 207 VDIWSLGCILYTLLVGKPPFE 227
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G + K I +D + A +++ +L + ++ +EI + + +++
Sbjct: 53 GGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFE 112
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D +V E + SL + LH + E + ARY R G++YLH +IH
Sbjct: 113 DDDFVYVVLEICRRRSLLE-LHKRRKAVTEPE--ARY-FMRQTIQGVQYLHNNR---VIH 165
Query: 379 RDIKPANVLIDDGMEARISDFGLA-KLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RD+K N+ ++D M+ +I DFGLA K+ DG R + GT Y+APE S +
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKXLCGTPNYIAPEVLCKKGHSFE 222
Query: 438 SDIYSFGVLLAVLVVGKFPFD 458
DI+S G +L L+VGK PF+
Sbjct: 223 VDIWSLGCILYTLLVGKPPFE 243
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 31/227 (13%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQP---PMAATELLNVRRVLINRK--MRQIK 296
EI+G G VV + + K A+K ID +A E+ +R + +R++
Sbjct: 23 EILGRGVSSVVRRC-IHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS 81
Query: 297 SEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYR 356
H N++ L+ LV++ MK G L D L E L+
Sbjct: 82 G---------HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-------TEKVTLSEKE 125
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITT 416
+ M + LE + H+ I+HRD+KP N+L+DD M +++DFG + + G ++
Sbjct: 126 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLRE 182
Query: 417 VAGTTGYVAPEYHQTLT------ISEKSDIYSFGVLLAVLVVGKFPF 457
V GT Y+APE + ++ D++S GV++ L+ G PF
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+GK+ ++K D M A + +N ++ + ++R + E+ + H L+ L
Sbjct: 26 GSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ 85
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
+ +V + + G L+ L + E + I + L+YL IIH
Sbjct: 86 DEEDMFMVVDLLLGGDLRYHLQQNVHFKEET---VKLFICE-LVMALDYLQNQR---IIH 138
Query: 379 RDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS 438
RD+KP N+L+D+ I+DF +A ++P +ITT+AGT Y+APE + + S
Sbjct: 139 RDMKPDNILLDEHGHVHITDFNIAAMLP---RETQITTMAGTKPYMAPEMFSSRKGAGYS 195
Query: 439 ---DIYSFGVLLAVLVVGKFPF 457
D +S GV L+ G+ P+
Sbjct: 196 FAVDWWSLGVTAYELLRGRRPY 217
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 118/285 (41%), Gaps = 42/285 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 26 LGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVM--KKLR---------- 71
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H L+ L A V+ ++ V E+M GSL D L L L +A +AS
Sbjct: 72 ---HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ Y+ R +HRD+ AN+L+ + + +++DFGLA+L+ D R +
Sbjct: 126 GMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKW 181
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENP 482
APE + KSD++SFG+LL L G+ P+ + R R E P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 241
Query: 483 HRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
D + C DPEERP+ + ++ L
Sbjct: 242 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 269
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 23 LGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVM--KKLR---------- 68
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H L+ L A V+ ++ V E+M GSL D L + L L ++ +AS
Sbjct: 69 ---HEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVD--MSAQIAS 122
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ Y+ R +HRD++ AN+L+ + + +++DFGLA+L+ D R +
Sbjct: 123 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTAR-QGAKFPIKW 178
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENP 482
APE + KSD++SFG+LL L G+ P+ + R R E P
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 238
Query: 483 HRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
D + C +PEERP+ + ++ L
Sbjct: 239 ESLHD-----------------LMCQCWRKEPEERPTFEYLQAFL 266
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 31/221 (14%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
+E++G GA V+ + + GK+ A+K I + P + +++EI
Sbjct: 14 MEVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAF--------------RDSSLENEIA 58
Query: 301 TAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIAR 359
+I H N++ L+ + LV + + G L D IL ++ + +
Sbjct: 59 VLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDAS-----LVIQ 113
Query: 360 GMASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFGLAKLMPDGHTRIRITT 416
+ S ++YLH I+HRD+KP N+L ++ + I+DFGL+K+ +G ++T
Sbjct: 114 QVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMST 166
Query: 417 VAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
GT GYVAPE S+ D +S GV+ +L+ G PF
Sbjct: 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 23 LGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVM--KKLR---------- 68
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H L+ L A V+ ++ V E+M GSL D L + L L ++ +AS
Sbjct: 69 ---HEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVD--MSAQIAS 122
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ Y+ R +HRD++ AN+L+ + + +++DFGLA+L+ D R +
Sbjct: 123 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKW 178
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENP 482
APE + KSD++SFG+LL L G+ P+ + R R E P
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 238
Query: 483 HRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
D + C +PEERP+ + ++ L
Sbjct: 239 ESLHD-----------------LMCQCWRKEPEERPTFEYLQAFL 266
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 16 LGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVM--KKLR---------- 61
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H L+ L A V+ + +V E+M GSL D L + L L +A +AS
Sbjct: 62 ---HEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAAQIAS 115
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ Y+ R +HRD++ AN+L+ + + +++DFGLA+L+ D R +
Sbjct: 116 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTAR-QGAKFPIKW 171
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENP 482
APE + KSD++SFG+LL L G+ P+ + R R E P
Sbjct: 172 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 231
Query: 483 HRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
D + C +PEERP+ + ++ L
Sbjct: 232 ESLHD-----------------LMCQCWRKEPEERPTFEYLQAFL 259
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 98/201 (48%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G + K I +D + A +++ +L + ++ +EI + + +++
Sbjct: 53 GGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFE 112
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D +V E + SL + LH + E + ARY R G++YLH +IH
Sbjct: 113 DDDFVYVVLEICRRRSLLE-LHKRRKAVTEPE--ARY-FMRQTIQGVQYLHNNR---VIH 165
Query: 379 RDIKPANVLIDDGMEARISDFGLA-KLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RD+K N+ ++D M+ +I DFGLA K+ DG R + GT Y+APE S +
Sbjct: 166 RDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKDLCGTPNYIAPEVLCKKGHSFE 222
Query: 438 SDIYSFGVLLAVLVVGKFPFD 458
DI+S G +L L+VGK PF+
Sbjct: 223 VDIWSLGCILYTLLVGKPPFE 243
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 290 RKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRR 347
++ R E G+ H N++ L+ VT+ ++V E+M+NGSL L HD
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----- 142
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+ + + RG+ASG++YL +HRD+ N+LI+ + ++SDFGL++++ D
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 408 GHTRIRITTVAGTTG--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
TT G + +PE + SD++S+G++L V+ G+ P+
Sbjct: 200 -DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 25/199 (12%)
Query: 262 GKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPD 321
GK +A+K ID+ + ++ L + R E+ + H N++ L +
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFR------------EVRIXKVLNHPNIVKLFEVIETEK 86
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGR-RELDWLARYRIARGMASGLEYLHMYHRPCIIHRD 380
LV E+ G + D L V+ GR +E + A++R + S ++Y H + I+HRD
Sbjct: 87 TLYLVXEYASGGEVFDYL--VAHGRXKEKEARAKFR---QIVSAVQYCH---QKFIVHRD 138
Query: 381 IKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-SEKSD 439
+K N+L+D +I+DFG + G+ ++ G Y APE Q + D
Sbjct: 139 LKAENLLLDADXNIKIADFGFSNEFTFGN---KLDAFCGAPPYAAPELFQGKKYDGPEVD 195
Query: 440 IYSFGVLLAVLVVGKFPFD 458
++S GV+L LV G PFD
Sbjct: 196 VWSLGVILYTLVSGSLPFD 214
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 290 RKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRR 347
++ R E G+ H N++ L+ VT+ ++V E+M+NGSL L HD
Sbjct: 86 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----- 140
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+ + + RG+ASG++YL +HRD+ N+LI+ + ++SDFGL++++ D
Sbjct: 141 QFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 197
Query: 408 GHTRIRITTVAGTTG--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
TT G + +PE + SD++S+G++L V+ G+ P+
Sbjct: 198 -DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 249
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 290 RKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRR 347
++ R E G+ H N++ L+ VT+ ++V E+M+NGSL L HD
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----- 142
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+ + + RG+ASG++YL +HRD+ N+LI+ + ++SDFGL++++ D
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 408 GHTRIRITTVAGTTG--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
TT G + +PE + SD++S+G++L V+ G+ P+
Sbjct: 200 -DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 290 RKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRR 347
++ R E G+ H N++ L+ VT+ ++V E+M+NGSL L HD
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----- 142
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+ + + RG+ASG++YL +HRD+ N+LI+ + ++SDFGL++++ D
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 408 GHTRIRITTVAGTTG--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
TT G + +PE + SD++S+G++L V+ G+ P+
Sbjct: 200 -DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 118/285 (41%), Gaps = 42/285 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 193 LGQGCFGEVWMGTWNGT--TRVAIKTLKPGNMSPEAFLQEAQVM--KKLR---------- 238
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H L+ L A V+ ++ V E+M GSL D L L L +A +AS
Sbjct: 239 ---HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVD--MAAQIAS 292
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ Y+ R +HRD++ AN+L+ + + +++DFGL +L+ D R +
Sbjct: 293 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTAR-QGAKFPIKW 348
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENP 482
APE + KSD++SFG+LL L G+ P+ + R R E P
Sbjct: 349 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 408
Query: 483 HRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
D + C DPEERP+ + ++ L
Sbjct: 409 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 436
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 290 RKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRR 347
++ R E G+ H N++ L+ VT+ ++V E+M+NGSL L HD
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----- 142
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+ + + RG+ASG++YL +HRD+ N+LI+ + ++SDFGL++++ D
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 408 GHTRIRITTVAGTTG--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
TT G + +PE + SD++S+G++L V+ G+ P+
Sbjct: 200 -DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 14/173 (8%)
Query: 290 RKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRR 347
++ R E G+ H N++ L+ VT+ ++V E+M+NGSL L HD
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----- 142
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+ + + RG+ASG++YL +HRD+ N+LI+ + ++SDFGL +++ D
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLED 199
Query: 408 GHTRIRITTVAGTTG--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
TT G + +PE + SD++S+G++L V+ G+ P+
Sbjct: 200 -DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 105
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I++FG + P
Sbjct: 106 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPS 162
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R TT+ GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 163 S----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 10/132 (7%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
+ E M GSL +L GR L + IA + GL YL H+ I+HRD+KP+
Sbjct: 81 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPS 134
Query: 385 NVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFG 444
N+L++ E ++ DFG++ + D + GT Y++PE Q S +SDI+S G
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 445 VLLAVLVVGKFP 456
+ L + VG++P
Sbjct: 191 LSLVEMAVGRYP 202
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 118/285 (41%), Gaps = 42/285 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 26 LGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVM--KKLR---------- 71
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H L+ L A V+ ++ V E+M G L D L L L +A +AS
Sbjct: 72 ---HEKLVQLYAVVSEEPIYI-VMEYMSKGCLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ Y+ R +HRD++ AN+L+ + + +++DFGLA+L+ D R +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKW 181
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENP 482
APE + KSD++SFG+LL L G+ P+ + R R E P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 241
Query: 483 HRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
D + C DPEERP+ + ++ L
Sbjct: 242 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 269
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 10/132 (7%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
+ E M GSL +L GR L + IA + GL YL H+ I+HRD+KP+
Sbjct: 81 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPS 134
Query: 385 NVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFG 444
N+L++ E ++ DFG++ + D + GT Y++PE Q S +SDI+S G
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 445 VLLAVLVVGKFP 456
+ L + VG++P
Sbjct: 191 LSLVEMAVGRYP 202
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 123/289 (42%), Gaps = 43/289 (14%)
Query: 241 LEI-IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
LE+ +G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 271 LEVKLGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVM--KKLR------ 320
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIAR 359
H L+ L A V+ ++ V E+M GSL D L + L L +A
Sbjct: 321 -------HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVD--MAA 370
Query: 360 GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAG 419
+ASG+ Y+ R +HRD++ AN+L+ + + +++DFGLA+L+ D R
Sbjct: 371 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKF 426
Query: 420 TTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVIS 478
+ APE + KSD++SFG+LL L G+ P+ + R R
Sbjct: 427 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 486
Query: 479 SENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
E P D + C +PEERP+ + ++ L
Sbjct: 487 PECPESLHD-----------------LMCQCWRKEPEERPTFEYLQAFL 518
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 10/132 (7%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
+ E M GSL +L GR L + IA + GL YL H+ I+HRD+KP+
Sbjct: 81 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPS 134
Query: 385 NVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFG 444
N+L++ E ++ DFG++ + D + GT Y++PE Q S +SDI+S G
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 445 VLLAVLVVGKFP 456
+ L + VG++P
Sbjct: 191 LSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 10/132 (7%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
+ E M GSL +L GR L + IA + GL YL H+ I+HRD+KP+
Sbjct: 81 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPS 134
Query: 385 NVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFG 444
N+L++ E ++ DFG++ + D + GT Y++PE Q S +SDI+S G
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 445 VLLAVLVVGKFP 456
+ L + VG++P
Sbjct: 191 LSLVEMAVGRYP 202
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 10/133 (7%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
+ E M GSL +L GR L + IA + GL YL H+ I+HRD+KP+
Sbjct: 81 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPS 134
Query: 385 NVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFG 444
N+L++ E ++ DFG++ + D + GT Y++PE Q S +SDI+S G
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 445 VLLAVLVVGKFPF 457
+ L + VG++P
Sbjct: 191 LSLVEMAVGRYPI 203
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 118/285 (41%), Gaps = 42/285 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G G G V+ G+ +AIK + M+ L +V+ +K+R
Sbjct: 26 LGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVM--KKLR---------- 71
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H L+ L A V+ ++ V E+M G L D L L L +A +AS
Sbjct: 72 ---HEKLVQLYAVVSEEPIYI-VTEYMSKGCLLDFLKGEMGKYLRLPQLVD--MAAQIAS 125
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGY 423
G+ Y+ R +HRD++ AN+L+ + + +++DFGLA+L+ D R +
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKW 181
Query: 424 VAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDDFFQYTEEMNMVRWMRNVISSENP 482
APE + KSD++SFG+LL L G+ P+ + R R E P
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 241
Query: 483 HRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCML 527
D + C DPEERP+ + ++ L
Sbjct: 242 ESLHD-----------------LMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G++I K A ++++ R+V + E+ ++ H N++ L
Sbjct: 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 96
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
LV E G L D + R+ + RI R + SG+ Y+H + I+H
Sbjct: 97 DKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARIIRQVLSGITYMH---KNKIVH 149
Query: 379 RDIKPANVLIDD---GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTIS 435
RD+KP N+L++ RI DFGL+ ++ GT Y+APE T
Sbjct: 150 RDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPEVLHG-TYD 205
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQY 463
EK D++S GV+L +L+ G PF+ +Y
Sbjct: 206 EKCDVWSTGVILYILLSGCPPFNGANEY 233
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 244 IGVGACG-VVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITA 302
+G GA G V+ E G K I + K Q N I + +I +EI
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKN---IEKFHEEIYNEISLL 100
Query: 303 GRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYRIARGM 361
+ H N++ L LV EF + G L + I++ R + D I + +
Sbjct: 101 KSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN-----RHKFDECDAANIMKQI 155
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLIDDG---MEARISDFGLAKLMP-DGHTRIRITTV 417
SG+ YLH ++ I+HRDIKP N+L+++ + +I DFGL+ D R R+
Sbjct: 156 LSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL--- 209
Query: 418 AGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
GT Y+APE + +EK D++S GV++ +L+ G PF
Sbjct: 210 -GTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 40/234 (17%)
Query: 235 EDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQ 294
E+ L+ IG G+ G VYK + +++AIK ID + + + + Q
Sbjct: 18 EELFTKLDRIGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITV---LSQ 73
Query: 295 IKSEIIT--------AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGR 346
S IT + ++W ++ E++ GS D+L G
Sbjct: 74 CDSPYITRYFGSYLKSTKLW------------------IIMEYLGGGSALDLL---KPGP 112
Query: 347 RELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMP 406
E ++A I R + GL+YLH + IHRDIK ANVL+ + + +++DFG+A +
Sbjct: 113 LEETYIAT--ILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLT 167
Query: 407 DGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDF 460
D T+I+ GT ++APE + K+DI+S G+ L G+ P D
Sbjct: 168 D--TQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 106
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I++FG + P
Sbjct: 107 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPS 163
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R TT+ GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 164 S----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 69/129 (53%), Gaps = 9/129 (6%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
LV E++ GSL+D L S G +L A+ +I GMA YLH H IHRD+
Sbjct: 112 LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ-QICEGMA----YLHAQH---YIHRDLAAR 163
Query: 385 NVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT-TGYVAPEYHQTLTISEKSDIYSF 443
NVL+D+ +I DFGLAK +P+GH R+ + + APE + SD++SF
Sbjct: 164 NVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSF 223
Query: 444 GVLLAVLVV 452
GV L L+
Sbjct: 224 GVTLYELLT 232
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 14/208 (6%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G++I K A ++++ R+V + E+ ++ H N++ L
Sbjct: 60 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 119
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
LV E G L D + +S R+ + RI R + SG+ Y+H + I+H
Sbjct: 120 DKGYFYLVGEVYTGGELFDEI--IS--RKRFSEVDAARIIRQVLSGITYMH---KNKIVH 172
Query: 379 RDIKPANVLIDD---GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTIS 435
RD+KP N+L++ RI DFGL+ ++ GT Y+APE T
Sbjct: 173 RDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPEVLHG-TYD 228
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQY 463
EK D++S GV+L +L+ G PF+ +Y
Sbjct: 229 EKCDVWSTGVILYILLSGCPPFNGANEY 256
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 96/191 (50%), Gaps = 16/191 (8%)
Query: 277 ATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL- 335
A +++N ++ L R ++++ E ++ H N++ L + H LV++ + G L
Sbjct: 35 AAKIINTKK-LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF 93
Query: 336 QDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDD---GM 392
+DI+ RE + + + LE + H I+HR++KP N+L+ G
Sbjct: 94 EDIV------AREF--YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 145
Query: 393 EARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV 452
+++DFGLA + D AGT GY++PE + S+ DI++ GV+L +L+V
Sbjct: 146 AVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 202
Query: 453 GKFPFDDFFQY 463
G PF D Q+
Sbjct: 203 GYPPFWDEDQH 213
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 14/208 (6%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G++I K A ++++ R+V + E+ ++ H N++ L
Sbjct: 61 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 120
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
LV E G L D + +S R+ + RI R + SG+ Y+H + I+H
Sbjct: 121 DKGYFYLVGEVYTGGELFDEI--IS--RKRFSEVDAARIIRQVLSGITYMH---KNKIVH 173
Query: 379 RDIKPANVLIDD---GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTIS 435
RD+KP N+L++ RI DFGL+ ++ GT Y+APE T
Sbjct: 174 RDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIAPEVLHG-TYD 229
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQY 463
EK D++S GV+L +L+ G PF+ +Y
Sbjct: 230 EKCDVWSTGVILYILLSGCPPFNGANEY 257
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 103
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 104 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 160
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R T + GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 161 S----RRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 96/191 (50%), Gaps = 16/191 (8%)
Query: 277 ATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL- 335
A +++N ++ L R ++++ E ++ H N++ L + H LV++ + G L
Sbjct: 35 AAKIINTKK-LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF 93
Query: 336 QDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDD---GM 392
+DI+ RE + + + LE + H I+HR++KP N+L+ G
Sbjct: 94 EDIV------AREF--YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 145
Query: 393 EARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV 452
+++DFGLA + D AGT GY++PE + S+ DI++ GV+L +L+V
Sbjct: 146 AVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 202
Query: 453 GKFPFDDFFQY 463
G PF D Q+
Sbjct: 203 GYPPFWDEDQH 213
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 104
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 105 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R T+ GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 162 S----RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 104
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 105 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R T + GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 162 S----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 16/191 (8%)
Query: 277 ATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL- 335
A +++N ++ L R ++++ E ++ H N++ L + H LV++ + G L
Sbjct: 58 AAKIINTKK-LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF 116
Query: 336 QDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDD---GM 392
+DI+ ++ + + + LE + H I+HR++KP N+L+ G
Sbjct: 117 EDIV--------AREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 168
Query: 393 EARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV 452
+++DFGLA + D AGT GY++PE + S+ DI++ GV+L +L+V
Sbjct: 169 AVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 225
Query: 453 GKFPFDDFFQY 463
G PF D Q+
Sbjct: 226 GYPPFWDEDQH 236
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 107
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
R+ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 108 RFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPS 164
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R TT+ GT Y+ PE + EK D++S GVL +VG PF+
Sbjct: 165 S----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 25/199 (12%)
Query: 262 GKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPD 321
G+ +AIK ID+ + T L + R E+ + H N++ L +
Sbjct: 40 GREVAIKIIDKTQLNPTSLQKLFR------------EVRIMKILNHPNIVKLFEVIETEK 87
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGR-RELDWLARYRIARGMASGLEYLHMYHRPCIIHRD 380
L+ E+ G + D L V+ GR +E + +++R + S ++Y H I+HRD
Sbjct: 88 TLYLIMEYASGGEVFDYL--VAHGRMKEKEARSKFR---QIVSAVQYCHQKR---IVHRD 139
Query: 381 IKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI-SEKSD 439
+K N+L+D M +I+DFG + G ++ G Y APE Q + D
Sbjct: 140 LKAENLLLDADMNIKIADFGFSNEFTVGG---KLDAFCGAPPYAAPELFQGKKYDGPEVD 196
Query: 440 IYSFGVLLAVLVVGKFPFD 458
++S GV+L LV G PFD
Sbjct: 197 VWSLGVILYTLVSGSLPFD 215
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 14/173 (8%)
Query: 290 RKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRR 347
++ R E G+ H N++ L+ VT+ ++V E M+NGSL L HD
Sbjct: 59 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA----- 113
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+ + + RG+ASG++YL +HRD+ N+LI+ + ++SDFGL++++ D
Sbjct: 114 QFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 170
Query: 408 GHTRIRITTVAGTTG--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
TT G + +PE + SD++S+G++L V+ G+ P+
Sbjct: 171 -DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 222
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 135/317 (42%), Gaps = 60/317 (18%)
Query: 216 PAICARPIFKKRDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGK--MIAIKKIDQP 273
P + ++P A+ +SL + +G G G V+ A +Y K +A+K +
Sbjct: 162 PCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMA----TYNKHTKVAVKTMKPG 217
Query: 274 PMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNG 333
M+ L V M+ ++ H L+ L A VT+ +++ EFM G
Sbjct: 218 SMSVEAFLAEANV-----MKTLQ----------HDKLVKLHAVVTKEPIYIIT-EFMAKG 261
Query: 334 SLQDILHDVSQGRRELDWLARY--RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
SL D L ++ L L + +IA GMA + IHRD++ AN+L+
Sbjct: 262 SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA-------FIEQRNYIHRDLRAANILVSAS 314
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLV 451
+ +I+DFGLA++ + APE + + KSD++SFG+LL +V
Sbjct: 315 LVCKIADFGLARV-----------GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 363
Query: 452 V-GKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCT 510
G+ P+ ++R + P N EE ++++ C
Sbjct: 364 TYGRIPYPGM----SNPEVIRALERGYRMPRPE---------NCPEELYNIMMR----CW 406
Query: 511 SDDPEERPSSKDVRCML 527
+ PEERP+ + ++ +L
Sbjct: 407 KNRPEERPTFEYIQSVL 423
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 29/222 (13%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
+++G GA V AE + K++AIK I + + E +++EI
Sbjct: 24 DVLGTGAFSEVILAEDKRT-QKLVAIKCIAKEALEGKE-------------GSMENEIAV 69
Query: 302 AGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
+I H N++ L + HL L+ + + G L D + V +G + +R
Sbjct: 70 LHKIKHPNIVALD-DIYESGGHLYLIMQLVSGGELFDRI--VEKG-----FYTERDASRL 121
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVL---IDDGMEARISDFGLAKLMPDGHTRIRITTV 417
+ L+ + H I+HRD+KP N+L +D+ + ISDFGL+K+ G ++T
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV---LSTA 178
Query: 418 AGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD 459
GT GYVAPE S+ D +S GV+ +L+ G PF D
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 96/191 (50%), Gaps = 16/191 (8%)
Query: 277 ATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL- 335
A +++N ++ L R ++++ E ++ H N++ L + H LV++ + G L
Sbjct: 34 AAKIINTKK-LSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF 92
Query: 336 QDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDD---GM 392
+DI+ RE + + + LE + H I+HR++KP N+L+ G
Sbjct: 93 EDIV------AREF--YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 144
Query: 393 EARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV 452
+++DFGLA + D AGT GY++PE + S+ DI++ GV+L +L+V
Sbjct: 145 AVKLADFGLAIEVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV 201
Query: 453 GKFPFDDFFQY 463
G PF D Q+
Sbjct: 202 GYPPFWDEDQH 212
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 29/222 (13%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
+++G GA V AE + K++AIK I + + E +++EI
Sbjct: 24 DVLGTGAFSEVILAEDKRT-QKLVAIKCIAKEALEGKE-------------GSMENEIAV 69
Query: 302 AGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
+I H N++ L + HL L+ + + G L D + V +G + +R
Sbjct: 70 LHKIKHPNIVALD-DIYESGGHLYLIMQLVSGGELFDRI--VEKG-----FYTERDASRL 121
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVL---IDDGMEARISDFGLAKLMPDGHTRIRITTV 417
+ L+ + H I+HRD+KP N+L +D+ + ISDFGL+K+ G ++T
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV---LSTA 178
Query: 418 AGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD 459
GT GYVAPE S+ D +S GV+ +L+ G PF D
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 103
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 104 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 160
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R T + GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 161 S----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 112/229 (48%), Gaps = 26/229 (11%)
Query: 235 EDSLASLE-IIGVGACGVVY--KAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
E S ++E +IG G G V + ++PG +AIK + + TE ++
Sbjct: 20 EASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLK---VGYTE----------KQ 66
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDW 351
R E G+ H N++ L+ VT+ ++V E+M+NGSL L + +
Sbjct: 67 RRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL---KKNDGQFTV 123
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTR 411
+ + RG+++G++YL +HRD+ N+LI+ + ++SDFGL++++ D
Sbjct: 124 IQLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPE 179
Query: 412 IRITTVAGTTG--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
TT G + APE + SD++S+G+++ V+ G+ P+
Sbjct: 180 AAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPY 228
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 108
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 109 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 165
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R T + GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 166 S----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 103
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 104 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 160
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R T + GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 161 S----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G++I K A ++++ R+V + E+ ++ H N++ L
Sbjct: 43 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 102
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
LV E G L D + R+ + RI R + SG+ Y+H + I+H
Sbjct: 103 DKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARIIRQVLSGITYMH---KNKIVH 155
Query: 379 RDIKPANVLIDDGME---ARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTIS 435
RD+KP N+L++ + RI DFGL+ ++ GT Y+APE T
Sbjct: 156 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVLHG-TYD 211
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQY 463
EK D++S GV+L +L+ G PF+ +Y
Sbjct: 212 EKCDVWSTGVILYILLSGCPPFNGANEY 239
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 29/222 (13%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
+++G GA V AE + K++AIK I + + E +++EI
Sbjct: 24 DVLGTGAFSEVILAEDKRTQ-KLVAIKCIAKEALEGKE-------------GSMENEIAV 69
Query: 302 AGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
+I H N++ L + HL L+ + + G L D + V +G + +R
Sbjct: 70 LHKIKHPNIVALD-DIYESGGHLYLIMQLVSGGELFDRI--VEKG-----FYTERDASRL 121
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVL---IDDGMEARISDFGLAKLMPDGHTRIRITTV 417
+ L+ + H I+HRD+KP N+L +D+ + ISDFGL+K+ G ++T
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV---LSTA 178
Query: 418 AGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD 459
GT GYVAPE S+ D +S GV+ +L+ G PF D
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 19/212 (8%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSE--IITAGRIWHRNLLPLQAH 316
GS+GK++ + + + A ++L +L + + +E I++ R H L L
Sbjct: 34 GSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN-HPFLTQLFCC 92
Query: 317 VTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
PD V EF+ G D++ + + RR + AR+ A + S L +LH I
Sbjct: 93 FQTPDRLFFVMEFVNGG---DLMFHIQKSRRFDEARARFYAAE-IISALMFLH---DKGI 145
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTR-IRITTVAGTTGYVAPEYHQTLTIS 435
I+RD+K NVL+D +++DFG+ K +G + T GT Y+APE Q +
Sbjct: 146 IYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTPDYIAPEILQEMLYG 202
Query: 436 EKSDIYSFGVLLAVLVVGKFPF-----DDFFQ 462
D ++ GVLL ++ G PF DD F+
Sbjct: 203 PAVDWWAMGVLLYEMLCGHAPFEAENEDDLFE 234
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 14/173 (8%)
Query: 290 RKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRR 347
++ R E G+ H N++ L+ VT+ ++V E M+NGSL L HD
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA----- 142
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+ + + RG+ASG++YL +HRD+ N+LI+ + ++SDFGL++++ D
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMG---AVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 408 GHTRIRITTVAGTTG--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
TT G + +PE + SD++S+G++L V+ G+ P+
Sbjct: 200 -DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 103
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 104 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 160
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R T + GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 161 S----RRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 29/222 (13%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
+++G GA V AE + K++AIK I + + E +++EI
Sbjct: 24 DVLGTGAFSEVILAEDKRTQ-KLVAIKCIAKKALEGKE-------------GSMENEIAV 69
Query: 302 AGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
+I H N++ L + HL L+ + + G L D + V +G + +R
Sbjct: 70 LHKIKHPNIVALD-DIYESGGHLYLIMQLVSGGELFDRI--VEKG-----FYTERDASRL 121
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVL---IDDGMEARISDFGLAKLMPDGHTRIRITTV 417
+ L+ + H I+HRD+KP N+L +D+ + ISDFGL+K+ G ++T
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV---LSTA 178
Query: 418 AGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD 459
GT GYVAPE S+ D +S GV+ +L+ G PF D
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 220
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 14/173 (8%)
Query: 290 RKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRR 347
++ R E G+ H N++ L+ VT+ ++V E M+NGSL L HD
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA----- 142
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+ + + RG+ASG++YL +HRD+ N+LI+ + ++SDFGL++++ D
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 408 GHTRIRITTVAGTTG--YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
TT G + +PE + SD++S+G++L V+ G+ P+
Sbjct: 200 -DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 11/201 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNV--RRVLINRKMRQIKSEIITAGRIWHRNLLPLQAH 316
GS+GK+ ++K+ +P + V + L R + K E + H ++ L
Sbjct: 39 GSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYA 98
Query: 317 VTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
L+ +F++ G D+ +S+ + ++ +A +A GL++LH I
Sbjct: 99 FQTEGKLYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAE-LALGLDHLHSL---GI 151
Query: 377 IHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE 436
I+RD+KP N+L+D+ +++DFGL+K D H + + + GT Y+APE S
Sbjct: 152 IYRDLKPENILLDEEGHIKLTDFGLSKEAID-HEK-KAYSFCGTVEYMAPEVVNRQGHSH 209
Query: 437 KSDIYSFGVLLAVLVVGKFPF 457
+D +S+GVL+ ++ G PF
Sbjct: 210 SADWWSYGVLMFEMLTGSLPF 230
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 27/236 (11%)
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDW 351
M QI++EI + H N++ + +V E + G L + + + L
Sbjct: 64 MEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSE 123
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG---MEARISDFGLAKLM-PD 407
+ + M + L Y H H ++H+D+KP N+L D +I DFGLA+L D
Sbjct: 124 GYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD 180
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEM 467
H+ T AGT Y+APE + ++ K DI+S GV++ L+ G PF
Sbjct: 181 EHS----TNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTG-------- 227
Query: 468 NMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
+ ++ + + P+ A++ + L + ++ +L + DPE RPS+ V
Sbjct: 228 TSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQML-------TKDPERRPSAAQV 276
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
+ E M GSL +L GR L + IA + GL YL H+ I+HRD+KP+
Sbjct: 84 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPS 137
Query: 385 NVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFG 444
N+L++ E ++ DFG++ + D GT Y++PE Q S +SDI+S G
Sbjct: 138 NILVNSRGEIKLCDFGVSGQLIDEMA----NEFVGTRSYMSPERLQGTHYSVQSDIWSMG 193
Query: 445 VLLAVLVVGKFP 456
+ L + VG++P
Sbjct: 194 LSLVEMAVGRYP 205
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 35/232 (15%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
+E++G G G VYK + G++ AIK +D + + +IK EI
Sbjct: 29 VELVGNGTYGQVYKGRHVKT-GQLAAIKVMD---------------VTGDEEEEIKQEIN 72
Query: 301 TAGRI-WHRNLLPLQAHVTRP------DCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
+ HRN+ + D LV EF GS+ D++ + + +W+A
Sbjct: 73 MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA 132
Query: 354 RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIR 413
I R + GL +LH + +IHRDIK NVL+ + E ++ DFG++ + T R
Sbjct: 133 Y--ICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGR 185
Query: 414 ITTVAGTTGYVAPEY-----HQTLTISEKSDIYSFGVLLAVLVVGKFPFDDF 460
T GT ++APE + T KSD++S G+ + G P D
Sbjct: 186 RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 237
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 69/129 (53%), Gaps = 9/129 (6%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
LV E++ GSL+D L S G +L A+ +I GMA YLH H IHR++
Sbjct: 95 LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ-QICEGMA----YLHAQH---YIHRNLAAR 146
Query: 385 NVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT-TGYVAPEYHQTLTISEKSDIYSF 443
NVL+D+ +I DFGLAK +P+GH R+ + + APE + SD++SF
Sbjct: 147 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSF 206
Query: 444 GVLLAVLVV 452
GV L L+
Sbjct: 207 GVTLYELLT 215
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 27/162 (16%)
Query: 332 NGSLQDILHDVSQGRRELDWLARYR---IARGMASGLEYLHMYHRPCIIHRDIKPANVLI 388
N +LQD++ + L Y + R +ASG+ +LH IIHRD+KP N+L+
Sbjct: 110 NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILV 166
Query: 389 D-------------DGMEARISDFGLAKLMPDGHTRIR--ITTVAGTTGYVAPEYHQTLT 433
+ + ISDFGL K + G R + +GT+G+ APE + T
Sbjct: 167 STSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEEST 226
Query: 434 ---ISEKSDIYSFG-VLLAVLVVGKFPFDDFFQYTEEMNMVR 471
++ DI+S G V +L GK PF D +Y+ E N++R
Sbjct: 227 KRRLTRSIDIFSMGCVFYYILSKGKHPFGD--KYSRESNIIR 266
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 106
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 107 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 163
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R + GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 164 S----RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 27/162 (16%)
Query: 332 NGSLQDILHDVSQGRRELDWLARYR---IARGMASGLEYLHMYHRPCIIHRDIKPANVLI 388
N +LQD++ + L Y + R +ASG+ +LH IIHRD+KP N+L+
Sbjct: 110 NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILV 166
Query: 389 D-------------DGMEARISDFGLAKLMPDGHTRIR--ITTVAGTTGYVAPEYHQTLT 433
+ + ISDFGL K + G R + +GT+G+ APE + T
Sbjct: 167 STSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEEST 226
Query: 434 ---ISEKSDIYSFG-VLLAVLVVGKFPFDDFFQYTEEMNMVR 471
++ DI+S G V +L GK PF D +Y+ E N++R
Sbjct: 227 KRRLTRSIDIFSMGCVFYYILSKGKHPFGD--KYSRESNIIR 266
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G + L +S+ D
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQR 114
Query: 354 RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIR 413
+A+ L Y H +IHRDIKP N+L+ E +I+DFG + P R
Sbjct: 115 TATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----R 167
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
+ GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 168 RXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
E IG GA G VY A + + G+ +AI++++ EL+ + +L+ R+ +
Sbjct: 25 FEKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENK------- 75
Query: 301 TAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
+ N++ D +V E++ GSL D++ + ++ + R
Sbjct: 76 ------NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-----AAVCRE 124
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGL-AKLMPDGHTRIRITTVAG 419
LE+LH +IHRDIK N+L+ +++DFG A++ P+ R +T+ G
Sbjct: 125 CLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVG 178
Query: 420 TTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T ++APE K DI+S G++ ++ G+ P+
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 69/129 (53%), Gaps = 9/129 (6%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
LV E++ GSL+D L S G +L A+ +I GMA YLH H IHR++
Sbjct: 95 LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ-QICEGMA----YLHSQH---YIHRNLAAR 146
Query: 385 NVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT-TGYVAPEYHQTLTISEKSDIYSF 443
NVL+D+ +I DFGLAK +P+GH R+ + + APE + SD++SF
Sbjct: 147 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSF 206
Query: 444 GVLLAVLVV 452
GV L L+
Sbjct: 207 GVTLYELLT 215
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 105
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 106 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 162
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R + GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 163 S----RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 129
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 130 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 186
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R + GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 187 S----RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 103
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 104 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 160
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R + GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 161 S----RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 15/159 (9%)
Query: 308 RNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGR--RELDWLARYRIARG----- 360
R + +Q+H+ P+ L F + + IL G REL L+++ R
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT 115
Query: 361 -MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAG 419
+A+ L Y H +IHRDIKP N+L+ E +I+DFG + P R + G
Sbjct: 116 ELANALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----RRAALCG 168
Query: 420 TTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
T Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 107
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
R+ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 108 RFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPS 164
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R T+ GT Y+ PE + EK D++S GVL +VG PF+
Sbjct: 165 S----RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 33/218 (15%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G+V A V S GK++A+KK+D ELL +E++
Sbjct: 28 IGEGSTGIVCIATVRSS-GKLVAVKKMDLRKQQRRELLF--------------NEVVIMR 72
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H N++ + D +V EF++ G+L DI V+ R + +IA +
Sbjct: 73 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTR-----MNEEQIAAVCLA 124
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFG----LAKLMPDGHTRIRITTVAG 419
L+ L + H +IHRDIK ++L+ ++SDFG ++K +P R + G
Sbjct: 125 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVG 178
Query: 420 TTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T ++APE L + DI+S G+++ +V G+ P+
Sbjct: 179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 216
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 106
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 107 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 163
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R + GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 164 S----RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+ SGLE+LH + II+RD+KP NVL+DD RISD GLA + G T+ + AGT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK--GYAGT 352
Query: 421 TGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
G++APE D ++ GV L ++ + PF
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+ SGLE+LH + II+RD+KP NVL+DD RISD GLA + G T+ + AGT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK--GYAGT 352
Query: 421 TGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
G++APE D ++ GV L ++ + PF
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 33/218 (15%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G+V A V S GK++A+KK+D ELL +E++
Sbjct: 32 IGEGSTGIVCIATVRSS-GKLVAVKKMDLRKQQRRELLF--------------NEVVIMR 76
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H N++ + D +V EF++ G+L DI V+ R + +IA +
Sbjct: 77 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTR-----MNEEQIAAVCLA 128
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFG----LAKLMPDGHTRIRITTVAG 419
L+ L + H +IHRDIK ++L+ ++SDFG ++K +P R + G
Sbjct: 129 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVG 182
Query: 420 TTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T ++APE L + DI+S G+++ +V G+ P+
Sbjct: 183 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+ SGLE+LH + II+RD+KP NVL+DD RISD GLA + G T+ + AGT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK--GYAGT 352
Query: 421 TGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
G++APE D ++ GV L ++ + PF
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+ SGLE+LH + II+RD+KP NVL+DD RISD GLA + G T+ + AGT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK--GYAGT 352
Query: 421 TGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
G++APE D ++ GV L ++ + PF
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 33/218 (15%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G+V A V S GK++A+KK+D ELL +E++
Sbjct: 37 IGEGSTGIVCIATV-RSSGKLVAVKKMDLRKQQRRELLF--------------NEVVIMR 81
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H N++ + D +V EF++ G+L DI V+ R + +IA +
Sbjct: 82 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTR-----MNEEQIAAVCLA 133
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFG----LAKLMPDGHTRIRITTVAG 419
L+ L + H +IHRDIK ++L+ ++SDFG ++K +P R + G
Sbjct: 134 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVG 187
Query: 420 TTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T ++APE L + DI+S G+++ +V G+ P+
Sbjct: 188 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 103
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 104 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 160
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R + GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 161 S----RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ K A +++N + N+ I E+ ++ H N++ L +
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVIN-KASAKNKDTSTILREVELLKKLDHPNIMKLFEILE 91
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
+V E G L D + R+ RI + + SG+ Y+H ++ I+H
Sbjct: 92 DSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMHKHN---IVH 144
Query: 379 RDIKPANVLIDD---GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTIS 435
RD+KP N+L++ + +I DFGL+ ++ GT Y+APE + T
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLRG-TYD 200
Query: 436 EKSDIYSFGVLLAVLVVGKFPF 457
EK D++S GV+L +L+ G PF
Sbjct: 201 EKCDVWSAGVILYILLSGTPPF 222
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 33/218 (15%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G+V A V S GK++A+KK+D ELL +E++
Sbjct: 39 IGEGSTGIVCIATV-RSSGKLVAVKKMDLRKQQRRELLF--------------NEVVIMR 83
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H N++ + D +V EF++ G+L DI V+ R + +IA +
Sbjct: 84 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTR-----MNEEQIAAVCLA 135
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFG----LAKLMPDGHTRIRITTVAG 419
L+ L + H +IHRDIK ++L+ ++SDFG ++K +P R + G
Sbjct: 136 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVG 189
Query: 420 TTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T ++APE L + DI+S G+++ +V G+ P+
Sbjct: 190 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 227
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 105/249 (42%), Gaps = 43/249 (17%)
Query: 238 LASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
L LE+ G G V+KA++ Y +A+K + +++ Q +
Sbjct: 26 LQLLEVKARGRFGCVWKAQLLNEY---VAVKIFP---------------IQDKQSWQNEY 67
Query: 298 EIITAGRIWHRNLLPL---QAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDWLA 353
E+ + + H N+L + T D L L+ F + GSL D L + W
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK-----ANVVSWNE 122
Query: 354 RYRIARGMASGLEYLHM-------YHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMP 406
IA MA GL YLH H+P I HRDIK NVL+ + + A I+DFGLA
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE 182
Query: 407 DGHTRIRITTVAGTTGYVAPEYHQTLTISEKS-----DIYSFGVLLAVL----VVGKFPF 457
G + GT Y+APE + ++ D+Y+ G++L L P
Sbjct: 183 AGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPV 242
Query: 458 DDFFQYTEE 466
D++ EE
Sbjct: 243 DEYMLPFEE 251
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 107/203 (52%), Gaps = 15/203 (7%)
Query: 259 GSYGKMIAIKKI---DQPPMAATELLNVRRVLINRKMR-QIKSEIITAGRIWHRNLLPLQ 314
GS+GK+ +KKI D + A ++L + + ++R +++ +I+ + H ++ L
Sbjct: 36 GSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV--EVNHPFIVKLH 93
Query: 315 AHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRP 374
L+ +F++ G D+ +S+ + ++ +A +A L++LH
Sbjct: 94 YAFQTEGKLYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAE-LALALDHLHSL--- 146
Query: 375 CIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI 434
II+RD+KP N+L+D+ +++DFGL+K D H + + + GT Y+APE
Sbjct: 147 GIIYRDLKPENILLDEEGHIKLTDFGLSKESID-HEK-KAYSFCGTVEYMAPEVVNRRGH 204
Query: 435 SEKSDIYSFGVLLAVLVVGKFPF 457
++ +D +SFGVL+ ++ G PF
Sbjct: 205 TQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 57/257 (22%)
Query: 225 KKRDIAFLTKEDSLASLEIIGVGACGVVYKAEV----PGSYGKMIAIKKIDQPPMAATEL 280
K+RDI L +E +G GA G V+ AE P ++A+K + P +AA
Sbjct: 13 KRRDIV-LKRE--------LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAA--- 60
Query: 281 LNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILH 340
RK Q ++E++T + H +++ D ++V+E+MK+G L L
Sbjct: 61 ---------RKDFQREAELLT--NLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLR 109
Query: 341 ------------DVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLI 388
Q + EL IA +ASG+ YL H +HRD+ N L+
Sbjct: 110 AHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLV 166
Query: 389 DDGMEARISDFGLAK-------LMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIY 441
+ +I DFG+++ GHT + I ++ PE + +SD++
Sbjct: 167 GANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR-------WMPPESIMYRKFTTESDVW 219
Query: 442 SFGVLL-AVLVVGKFPF 457
SFGV+L + GK P+
Sbjct: 220 SFGVILWEIFTYGKQPW 236
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G++I K A ++++ R+V + E+ ++ H N+ L
Sbjct: 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFE 96
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
LV E G L D + R+ + RI R + SG+ Y H + I+H
Sbjct: 97 DKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARIIRQVLSGITYXH---KNKIVH 149
Query: 379 RDIKPANVLIDD---GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTIS 435
RD+KP N+L++ RI DFGL+ + GT Y+APE T
Sbjct: 150 RDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKXKDKIGTAYYIAPEVLHG-TYD 205
Query: 436 EKSDIYSFGVLLAVLVVGKFPFDDFFQY 463
EK D++S GV+L +L+ G PF+ +Y
Sbjct: 206 EKCDVWSTGVILYILLSGCPPFNGANEY 233
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 107/203 (52%), Gaps = 15/203 (7%)
Query: 259 GSYGKMIAIKKI---DQPPMAATELLNVRRVLINRKMR-QIKSEIITAGRIWHRNLLPLQ 314
GS+GK+ +KKI D + A ++L + + ++R +++ +I+ + H ++ L
Sbjct: 35 GSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV--EVNHPFIVKLH 92
Query: 315 AHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRP 374
L+ +F++ G D+ +S+ + ++ +A +A L++LH
Sbjct: 93 YAFQTEGKLYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAE-LALALDHLHSL--- 145
Query: 375 CIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI 434
II+RD+KP N+L+D+ +++DFGL+K D H + + + GT Y+APE
Sbjct: 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESID-HEK-KAYSFCGTVEYMAPEVVNRRGH 203
Query: 435 SEKSDIYSFGVLLAVLVVGKFPF 457
++ +D +SFGVL+ ++ G PF
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 107/203 (52%), Gaps = 15/203 (7%)
Query: 259 GSYGKMIAIKKI---DQPPMAATELLNVRRVLINRKMR-QIKSEIITAGRIWHRNLLPLQ 314
GS+GK+ +KKI D + A ++L + + ++R +++ +I+ + H ++ L
Sbjct: 35 GSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV--EVNHPFIVKLH 92
Query: 315 AHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRP 374
L+ +F++ G D+ +S+ + ++ +A +A L++LH
Sbjct: 93 YAFQTEGKLYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAE-LALALDHLHSL--- 145
Query: 375 CIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI 434
II+RD+KP N+L+D+ +++DFGL+K D H + + + GT Y+APE
Sbjct: 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESID-HEK-KAYSFCGTVEYMAPEVVNRRGH 203
Query: 435 SEKSDIYSFGVLLAVLVVGKFPF 457
++ +D +SFGVL+ ++ G PF
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ EI + H N+L + + L+ EF G L L GR
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ--KHGR-----FD 112
Query: 354 RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIR 413
R A M + LH H +IHRDIKP N+L+ E +I+DFG + P +R
Sbjct: 113 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LR 168
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
+ GT Y+ PE + T EK D++ GVL +VG PFD
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ EI + H N+L + + L+ EF G L L GR
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ--KHGR-----FD 113
Query: 354 RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIR 413
R A M + LH H +IHRDIKP N+L+ E +I+DFG + P +R
Sbjct: 114 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LR 169
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
+ GT Y+ PE + T EK D++ GVL +VG PFD
Sbjct: 170 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ EI + H N+L + + L+ EF G L L GR
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ--KHGR-----FD 112
Query: 354 RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIR 413
R A M + LH H +IHRDIKP N+L+ E +I+DFG + P +R
Sbjct: 113 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LR 168
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
+ GT Y+ PE + T EK D++ GVL +VG PFD
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT----ELLNVRRVLINRKMRQIKSEI 299
IGVGA G VYKA P S G +A+K + P + VR V + R++ +
Sbjct: 17 IGVGAYGTVYKARDPHS-GHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFE--- 72
Query: 300 ITAGRIWHRNLLPLQ--AHVTRPDCHL---LVYEFMKNGSLQDILHDVSQGRRELDWLAR 354
H N++ L +R D + LV+E + + L+ L + +
Sbjct: 73 -------HPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 124
Query: 355 YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRI 414
+ R GL++LH CI+HRD+KP N+L+ G +++DFGLA++ ++ +
Sbjct: 125 --LMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMAL 176
Query: 415 TTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLA 448
T V T Y APE T + D++S G + A
Sbjct: 177 TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFA 210
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ E+ + H N+L L + L+ E+ G++ REL L+
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY----------RELQKLS 106
Query: 354 RYRIARG------MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
++ R +A+ L Y H +IHRDIKP N+L+ E +I+DFG + P
Sbjct: 107 KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS 163
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R + GT Y+ PE + EK D++S GVL +VGK PF+
Sbjct: 164 S----RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 32/205 (15%)
Query: 326 VYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPAN 385
+Y M+ G++ L+ + ++ +D R + M LE +H H+ I+H D+KPAN
Sbjct: 87 IYMVMECGNID--LNSWLKKKKSIDPWERKSYWKNM---LEAVHTIHQHGIVHSDLKPAN 141
Query: 386 VLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS------- 438
LI DGM ++ DFG+A M T + + GT Y+ PE + ++ S ++
Sbjct: 142 FLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 200
Query: 439 ----DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNG 494
D++S G +L + GK PF +N + + +I +P+ I+ +
Sbjct: 201 SPKSDVWSLGCILYYMTYGKTPFQQI------INQISKLHAII---DPNHEIE---FPDI 248
Query: 495 YEEQMRLVLKIAYFCTSDDPEERPS 519
E+ ++ VLK C DP++R S
Sbjct: 249 PEKDLQDVLKC---CLKRDPKQRIS 270
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 32/205 (15%)
Query: 326 VYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPAN 385
+Y M+ G++ L+ + ++ +D R + M LE +H H+ I+H D+KPAN
Sbjct: 84 IYMVMECGNID--LNSWLKKKKSIDPWERKSYWKNM---LEAVHTIHQHGIVHSDLKPAN 138
Query: 386 VLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS------- 438
LI DGM ++ DFG+A M T + + GT Y+ PE + ++ S ++
Sbjct: 139 FLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 197
Query: 439 ----DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNG 494
D++S G +L + GK PF +N + + +I +P+ I+ +
Sbjct: 198 SPKSDVWSLGCILYYMTYGKTPFQQI------INQISKLHAII---DPNHEIE---FPDI 245
Query: 495 YEEQMRLVLKIAYFCTSDDPEERPS 519
E+ ++ VLK C DP++R S
Sbjct: 246 PEKDLQDVLKC---CLKRDPKQRIS 267
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 32/205 (15%)
Query: 326 VYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPAN 385
+Y M+ G++ L+ + ++ +D R + M LE +H H+ I+H D+KPAN
Sbjct: 131 IYMVMECGNID--LNSWLKKKKSIDPWERKSYWKNM---LEAVHTIHQHGIVHSDLKPAN 185
Query: 386 VLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS------- 438
LI DGM ++ DFG+A M T + + GT Y+ PE + ++ S ++
Sbjct: 186 FLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 244
Query: 439 ----DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNG 494
D++S G +L + GK PF +N + + +I +P+ I+ +
Sbjct: 245 SPKSDVWSLGCILYYMTYGKTPFQQI------INQISKLHAII---DPNHEIE---FPDI 292
Query: 495 YEEQMRLVLKIAYFCTSDDPEERPS 519
E+ ++ VLK C DP++R S
Sbjct: 293 PEKDLQDVLKC---CLKRDPKQRIS 314
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ K A +++N + N+ I E+ ++ H N++ L +
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVIN-KASAKNKDTSTILREVELLKKLDHPNIMKLFEILE 91
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
+V E G L D + R+ RI + + SG+ Y+H ++ I+H
Sbjct: 92 DSSSFYIVGELYTGGELFDEI----IKRKRFSEHDAARIIKQVFSGITYMHKHN---IVH 144
Query: 379 RDIKPANVLIDD---GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTIS 435
RD+KP N+L++ + +I DFGL+ ++ GT Y+APE + T
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLRG-TYD 200
Query: 436 EKSDIYSFGVLLAVLVVGKFPF 457
EK D++S GV+L +L+ G PF
Sbjct: 201 EKCDVWSAGVILYILLSGTPPF 222
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 15/202 (7%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ K A +++N + N+ I E+ ++ H N++ L +
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVIN-KASAKNKDTSTILREVELLKKLDHPNIMKLFEILE 91
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
+V E G L D + R+ RI + + SG+ Y+H ++ I+H
Sbjct: 92 DSSSFYIVGELYTGGELFDEI----IKRKRFSEHDAARIIKQVFSGITYMHKHN---IVH 144
Query: 379 RDIKPANVLIDD---GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTIS 435
RD+KP N+L++ + +I DFGL+ ++ GT Y+APE + T
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPEVLRG-TYD 200
Query: 436 EKSDIYSFGVLLAVLVVGKFPF 457
EK D++S GV+L +L+ G PF
Sbjct: 201 EKCDVWSAGVILYILLSGTPPF 222
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
LV E++ GSL+D L G +L A+ +I GMA YLH H IHR +
Sbjct: 90 LVMEYVPLGSLRDYLPRHCVGLAQLLLFAQ-QICEGMA----YLHAQH---YIHRALAAR 141
Query: 385 NVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT-TGYVAPEYHQTLTISEKSDIYSF 443
NVL+D+ +I DFGLAK +P+GH R+ + + APE + SD++SF
Sbjct: 142 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSF 201
Query: 444 GVLLAVLVV 452
GV L L+
Sbjct: 202 GVTLYELLT 210
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
E IG GA G VY A + + G+ +AI++++ EL+ + +L+ R+ +
Sbjct: 26 FEKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENK------- 76
Query: 301 TAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
+ N++ D +V E++ GSL D++ + ++ + R
Sbjct: 77 ------NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-----AAVCRE 125
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGL-AKLMPDGHTRIRITTVAG 419
LE+LH +IHR+IK N+L+ +++DFG A++ P+ R +T+ G
Sbjct: 126 CLQALEFLHSNQ---VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVG 179
Query: 420 TTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T ++APE K DI+S G++ ++ G+ P+
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 32/205 (15%)
Query: 326 VYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPAN 385
+Y M+ G++ L+ + ++ +D R + M LE +H H+ I+H D+KPAN
Sbjct: 131 IYMVMECGNID--LNSWLKKKKSIDPWERKSYWKNM---LEAVHTIHQHGIVHSDLKPAN 185
Query: 386 VLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS------- 438
LI DGM ++ DFG+A M T + + GT Y+ PE + ++ S ++
Sbjct: 186 FLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 244
Query: 439 ----DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNG 494
D++S G +L + GK PF +N + + +I +P+ I+ +
Sbjct: 245 SPKSDVWSLGCILYYMTYGKTPFQQI------INQISKLHAII---DPNHEIE---FPDI 292
Query: 495 YEEQMRLVLKIAYFCTSDDPEERPS 519
E+ ++ VLK C DP++R S
Sbjct: 293 PEKDLQDVLKC---CLKRDPKQRIS 314
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
LV E++ GSL+D L G +L A+ +I GMA YLH H IHR +
Sbjct: 89 LVMEYVPLGSLRDYLPRHCVGLAQLLLFAQ-QICEGMA----YLHAQH---YIHRALAAR 140
Query: 385 NVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT-TGYVAPEYHQTLTISEKSDIYSF 443
NVL+D+ +I DFGLAK +P+GH R+ + + APE + SD++SF
Sbjct: 141 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSF 200
Query: 444 GVLLAVLVV 452
GV L L+
Sbjct: 201 GVTLYELLT 209
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 32/205 (15%)
Query: 326 VYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPAN 385
+Y M+ G++ L+ + ++ +D R + M LE +H H+ I+H D+KPAN
Sbjct: 83 IYMVMECGNID--LNSWLKKKKSIDPWERKSYWKNM---LEAVHTIHQHGIVHSDLKPAN 137
Query: 386 VLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS------- 438
LI DGM ++ DFG+A M T + + GT Y+ PE + ++ S ++
Sbjct: 138 FLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 196
Query: 439 ----DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNG 494
D++S G +L + GK PF +N + + +I +P+ I+ +
Sbjct: 197 SPKSDVWSLGCILYYMTYGKTPFQQI------INQISKLHAII---DPNHEIE---FPDI 244
Query: 495 YEEQMRLVLKIAYFCTSDDPEERPS 519
E+ ++ VLK C DP++R S
Sbjct: 245 PEKDLQDVLKC---CLKRDPKQRIS 266
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 33/218 (15%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G+V A V S GK++A+KK+D ELL +E++
Sbjct: 159 IGEGSTGIVCIATV-RSSGKLVAVKKMDLRKQQRRELLF--------------NEVVIMR 203
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H N++ + D +V EF++ G+L DI V+ R + +IA +
Sbjct: 204 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTR-----MNEEQIAAVCLA 255
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFG----LAKLMPDGHTRIRITTVAG 419
L+ L + H +IHRDIK ++L+ ++SDFG ++K +P R + G
Sbjct: 256 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVG 309
Query: 420 TTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T ++APE L + DI+S G+++ +V G+ P+
Sbjct: 310 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
E IG GA G VY A + + G+ +AI++++ EL+ + +L+ R+ +
Sbjct: 26 FEKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENK------- 76
Query: 301 TAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
+ N++ D +V E++ GSL D++ + ++ + R
Sbjct: 77 ------NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-----AAVCRE 125
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGL-AKLMPDGHTRIRITTVAG 419
LE+LH +IHRDIK N+L+ +++DFG A++ P+ R + + G
Sbjct: 126 CLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SXMVG 179
Query: 420 TTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T ++APE K DI+S G++ ++ G+ P+
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 32/205 (15%)
Query: 326 VYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPAN 385
+Y M+ G++ L+ + ++ +D R + M LE +H H+ I+H D+KPAN
Sbjct: 103 IYMVMECGNID--LNSWLKKKKSIDPWERKSYWKNM---LEAVHTIHQHGIVHSDLKPAN 157
Query: 386 VLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS------- 438
LI DGM ++ DFG+A M T + + GT Y+ PE + ++ S ++
Sbjct: 158 FLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 216
Query: 439 ----DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNG 494
D++S G +L + GK PF +N + + +I +P+ I+ +
Sbjct: 217 SPKSDVWSLGCILYYMTYGKTPFQQI------INQISKLHAII---DPNHEIE---FPDI 264
Query: 495 YEEQMRLVLKIAYFCTSDDPEERPS 519
E+ ++ VLK C DP++R S
Sbjct: 265 PEKDLQDVLKC---CLKRDPKQRIS 286
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 33/218 (15%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G+V A V S GK++A+KK+D ELL +E++
Sbjct: 82 IGEGSTGIVCIATV-RSSGKLVAVKKMDLRKQQRRELLF--------------NEVVIMR 126
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H N++ + D +V EF++ G+L DI V+ R + +IA +
Sbjct: 127 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTR-----MNEEQIAAVCLA 178
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFG----LAKLMPDGHTRIRITTVAG 419
L+ L + H +IHRDIK ++L+ ++SDFG ++K +P R + G
Sbjct: 179 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVG 232
Query: 420 TTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T ++APE L + DI+S G+++ +V G+ P+
Sbjct: 233 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG G G VY + + GK I A + LN R+ ++ Q +E I
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIH---------CAVKSLN--RITDIGEVSQFLTEGII 83
Query: 302 AGRIWHRNLLPLQAHVTRPD-CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
H N+L L R + L+V +MK+G L++ + + + D +
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQ 140
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G++YL +HRD+ N ++D+ +++DFGLA+ M D +V
Sbjct: 141 VAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEX----XSVHNK 193
Query: 421 TG------YVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDD 459
TG ++A E QT + KSD++SFGVLL L+ G P+ D
Sbjct: 194 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 239
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
E IG GA G VY A + + G+ +AI++++ EL+ + +L+ R+ +
Sbjct: 25 FEKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENK------- 75
Query: 301 TAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
+ N++ D +V E++ GSL D++ + ++ + R
Sbjct: 76 ------NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-----AAVCRE 124
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGL-AKLMPDGHTRIRITTVAG 419
LE+LH +IHRDIK N+L+ +++DFG A++ P+ R + + G
Sbjct: 125 CLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SXMVG 178
Query: 420 TTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T ++APE K DI+S G++ ++ G+ P+
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 27/218 (12%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
E IG GA G VY A + + G+ +AI++++ EL+ + +L+ R+ +
Sbjct: 25 FEKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELI-INEILVMRENK------- 75
Query: 301 TAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
+ N++ D +V E++ GSL D++ + ++ + R
Sbjct: 76 ------NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-----AAVCRE 124
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGL-AKLMPDGHTRIRITTVAG 419
LE+LH +IHRDIK N+L+ +++DFG A++ P+ R + + G
Sbjct: 125 CLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SEMVG 178
Query: 420 TTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T ++APE K DI+S G++ ++ G+ P+
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 35/232 (15%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
D E +G GA VV + +KK AA +++N ++ L R +++
Sbjct: 31 DDYQLFEELGKGAFSVVRRC-----------VKKTPTQEYAA-KIINTKK-LSARDHQKL 77
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
+ E + H N++ L ++ H LV++ + G L + D +AR
Sbjct: 78 EREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFE------------DIVARE 125
Query: 356 RIARGMASG-----LEYLHMYHRPCIIHRDIKPANVLIDD---GMEARISDFGLAKLMPD 407
+ AS LE ++ H+ I+HRD+KP N+L+ G +++DFGLA +
Sbjct: 126 YYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQ 184
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD 459
G + AGT GY++PE + + DI++ GV+L +L+VG PF D
Sbjct: 185 GEQQAWFG-FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWD 235
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 16/155 (10%)
Query: 307 HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGL 365
H N++ L + LV E K G L D I+H R + + + I + + SG+
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH-----RMKFNEVDAAVIIKQVLSGV 149
Query: 366 EYLHMYHRPCIIHRDIKPANVLIDDGME---ARISDFGLAKLMPDGHTRIRITTVAGTTG 422
YLH ++ I+HRD+KP N+L++ + +I DFGL+ + + + ++ GT
Sbjct: 150 TYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN---QKKMKERLGTAY 203
Query: 423 YVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
Y+APE + EK D++S GV+L +L+ G PF
Sbjct: 204 YIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPF 237
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 78/166 (46%), Gaps = 31/166 (18%)
Query: 332 NGSLQDILHDVSQGRRELDWLARYR---IARGMASGLEYLHMYHRPCIIHRDIKPANVLI 388
N +LQD++ + L Y + R +ASG+ +LH IIHRD+KP N+L+
Sbjct: 92 NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILV 148
Query: 389 D-------------DGMEARISDFGLAKLMPDGHTRIR--ITTVAGTTGYVAPE------ 427
+ + ISDFGL K + G + R + +GT+G+ APE
Sbjct: 149 STSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESN 208
Query: 428 -YHQTLTISEKSDIYSFG-VLLAVLVVGKFPFDDFFQYTEEMNMVR 471
++ DI+S G V +L GK PF D +Y+ E N++R
Sbjct: 209 NLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD--KYSRESNIIR 252
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG G G VY + + GK I A + LN R+ ++ Q +E I
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIH---------CAVKSLN--RITDIGEVSQFLTEGII 76
Query: 302 AGRIWHRNLLPLQAHVTRPD-CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
H N+L L R + L+V +MK+G L++ + + + D +
Sbjct: 77 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQ 133
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G++YL +HRD+ N ++D+ +++DFGLA+ M D +V
Sbjct: 134 VAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK----EYYSVHNK 186
Query: 421 TG------YVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDD 459
TG ++A E QT + KSD++SFGVLL L+ G P+ D
Sbjct: 187 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 232
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG G G VY + + GK I A + LN R+ ++ Q +E I
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIH---------CAVKSLN--RITDIGEVSQFLTEGII 84
Query: 302 AGRIWHRNLLPLQAHVTRPD-CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
H N+L L R + L+V +MK+G L++ + + + D +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQ 141
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G++YL +HRD+ N ++D+ +++DFGLA+ M D +V
Sbjct: 142 VAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK----EYYSVHNK 194
Query: 421 TG------YVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDD 459
TG ++A E QT + KSD++SFGVLL L+ G P+ D
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 16/177 (9%)
Query: 287 LINRKMRQIKSEIITAGRIW--HRNLLPLQAHVTRPDCH-LLVYEFMKNGSLQDILHDVS 343
+I+++M + ITA ++ H N++ L V H LV E + G L +
Sbjct: 43 IISKRMEANTQKEITALKLCEGHPNIVKLHE-VFHDQLHTFLVMELLNGGEL---FERIK 98
Query: 344 QGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFG 400
+ + + A Y I R + S + ++H ++HRD+KP N+L +D +E +I DFG
Sbjct: 99 KKKHFSETEASY-IMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFG 154
Query: 401 LAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
A+L P + ++ T T Y APE E D++S GV+L ++ G+ PF
Sbjct: 155 FARLKPPDNQPLK--TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG G G VY + + GK I A + LN R+ ++ Q +E I
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIH---------CAVKSLN--RITDIGEVSQFLTEGII 82
Query: 302 AGRIWHRNLLPLQAHVTRPD-CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
H N+L L R + L+V +MK+G L++ + + + D +
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQ 139
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G++YL +HRD+ N ++D+ +++DFGLA+ M D +V
Sbjct: 140 VAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK----EYYSVHNK 192
Query: 421 TG------YVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDD 459
TG ++A E QT + KSD++SFGVLL L+ G P+ D
Sbjct: 193 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 238
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG G G VY + + GK I A + LN R+ ++ Q +E I
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIH---------CAVKSLN--RITDIGEVSQFLTEGII 81
Query: 302 AGRIWHRNLLPLQAHVTRPD-CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
H N+L L R + L+V +MK+G L++ + + + D +
Sbjct: 82 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQ 138
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G++YL +HRD+ N ++D+ +++DFGLA+ M D +V
Sbjct: 139 VAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK----EYYSVHNK 191
Query: 421 TG------YVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDD 459
TG ++A E QT + KSD++SFGVLL L+ G P+ D
Sbjct: 192 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 237
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG G G VY + + GK I A + LN R+ ++ Q +E I
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIH---------CAVKSLN--RITDIGEVSQFLTEGII 84
Query: 302 AGRIWHRNLLPLQAHVTRPD-CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
H N+L L R + L+V +MK+G L++ + + + D +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQ 141
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G++YL +HRD+ N ++D+ +++DFGLA+ M D +V
Sbjct: 142 VAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK----EYYSVHNK 194
Query: 421 TG------YVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDD 459
TG ++A E QT + KSD++SFGVLL L+ G P+ D
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG G G VY + + GK I A + LN R+ ++ Q +E I
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIH---------CAVKSLN--RITDIGEVSQFLTEGII 83
Query: 302 AGRIWHRNLLPLQAHVTRPD-CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
H N+L L R + L+V +MK+G L++ + + + D +
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQ 140
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G++YL +HRD+ N ++D+ +++DFGLA+ M D +V
Sbjct: 141 VAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK----EYYSVHNK 193
Query: 421 TG------YVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDD 459
TG ++A E QT + KSD++SFGVLL L+ G P+ D
Sbjct: 194 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 239
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG G G VY + + GK I A + LN R+ ++ Q +E I
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIH---------CAVKSLN--RITDIGEVSQFLTEGII 102
Query: 302 AGRIWHRNLLPLQAHVTRPD-CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
H N+L L R + L+V +MK+G L++ + + + D +
Sbjct: 103 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQ 159
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G++YL +HRD+ N ++D+ +++DFGLA+ M D +V
Sbjct: 160 VAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK----EYYSVHNK 212
Query: 421 TG------YVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDD 459
TG ++A E QT + KSD++SFGVLL L+ G P+ D
Sbjct: 213 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 258
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 36/239 (15%)
Query: 226 KRDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRR 285
+ ++ F + LE +G G GVVYKA+ S G+++A+K R
Sbjct: 11 RENLYFQGLMEKYQKLEKVGEGTYGVVYKAK--DSQGRIVALK----------------R 52
Query: 286 VLINRKMRQIKS----EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHD 341
+ ++ + I S EI + H N++ L + C LV+EFM+ L+ +L +
Sbjct: 53 IRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDE 111
Query: 342 VSQGRRELDW-LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFG 400
G ++ + Y++ RG+A H+ I+HRD+KP N+LI+ +++DFG
Sbjct: 112 NKTGLQDSQIKIYLYQLLRGVAHC-------HQHRILHRDLKPQNLLINSDGALKLADFG 164
Query: 401 LAKLMPDGHTRIRITTVAGTTGYVAPE-YHQTLTISEKSDIYSFGVLLAVLVVGK--FP 456
LA+ G T T Y AP+ + S DI+S G + A ++ GK FP
Sbjct: 165 LARAF--GIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP 221
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG G G VY + + GK I A + LN R+ ++ Q +E I
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIH---------CAVKSLN--RITDIGEVSQFLTEGII 103
Query: 302 AGRIWHRNLLPLQAHVTRPD-CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
H N+L L R + L+V +MK+G L++ + + + D +
Sbjct: 104 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQ 160
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G++YL +HRD+ N ++D+ +++DFGLA+ M D +V
Sbjct: 161 VAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK----EYYSVHNK 213
Query: 421 TG------YVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDD 459
TG ++A E QT + KSD++SFGVLL L+ G P+ D
Sbjct: 214 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 259
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG G G VY + + GK I A + LN R+ ++ Q +E I
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIH---------CAVKSLN--RITDIGEVSQFLTEGII 79
Query: 302 AGRIWHRNLLPLQAHVTRPD-CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
H N+L L R + L+V +MK+G L++ + + + D +
Sbjct: 80 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQ 136
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G++YL +HRD+ N ++D+ +++DFGLA+ M D +V
Sbjct: 137 VAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK----EYYSVHNK 189
Query: 421 TG------YVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDD 459
TG ++A E QT + KSD++SFGVLL L+ G P+ D
Sbjct: 190 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 235
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 109/235 (46%), Gaps = 28/235 (11%)
Query: 226 KRDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRR 285
+ ++ F + LE +G G GVVYKA+ S G+++A+K+I E +
Sbjct: 11 RENLYFQGLMEKYQKLEKVGEGTYGVVYKAK--DSQGRIVALKRI----RLDAEDEGIPS 64
Query: 286 VLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQG 345
I EI + H N++ L + C LV+EFM+ L+ +L + G
Sbjct: 65 TAIR--------EISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTG 115
Query: 346 RRELDW-LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKL 404
++ + Y++ RG+A H+ I+HRD+KP N+LI+ +++DFGLA+
Sbjct: 116 LQDSQIKIYLYQLLRGVAHC-------HQHRILHRDLKPQNLLINSDGALKLADFGLARA 168
Query: 405 MPDGHTRIRITTVAGTTGYVAPE-YHQTLTISEKSDIYSFGVLLAVLVVGK--FP 456
G T T Y AP+ + S DI+S G + A ++ GK FP
Sbjct: 169 F--GIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP 221
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 45/255 (17%)
Query: 231 FLTKEDSLASLEIIGVGACGVVYKAE-VPGSYGKMIAIKKIDQPPMAATELLNVRRVLIN 289
F K D L + +G GA GVV K VP G+++A+K+I A +R+L++
Sbjct: 46 FEVKADDLEPIMELGRGAYGVVEKMRHVPS--GQIMAVKRI----RATVNSQEQKRLLMD 99
Query: 290 R--KMRQIKSEIITA--------GRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL 339
MR + G +W + E M + SL
Sbjct: 100 LDISMRTVDCPFTVTFYGALFREGDVW------------------ICMELM-DTSLDKFY 140
Query: 340 HDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDF 399
V + + +IA + LE+LH + +IHRD+KP+NVLI+ + ++ DF
Sbjct: 141 KQVIDKGQTIPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDF 198
Query: 400 GLAKLMPDGHTRIRITTVAGTTGYVAPE-YHQTLT---ISEKSDIYSFGVLLAVLVVGKF 455
G++ + D + T AG Y+APE + L S KSDI+S G+ + L + +F
Sbjct: 199 GISGYLVDSVAK---TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRF 255
Query: 456 PFDDFFQYTEEMNMV 470
P+D + +++ V
Sbjct: 256 PYDSWGTPFQQLKQV 270
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 104/256 (40%), Gaps = 44/256 (17%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
L SL LEI G G V+KA++ + +A+K L +++
Sbjct: 11 LVPRGSLQLLEIKARGRFGCVWKAQLMNDF---VAVKIFP---------------LQDKQ 52
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRP---DCHL-LVYEFMKNGSLQDILHDVSQGRR 347
Q + EI + + H NLL A R + L L+ F GSL D L
Sbjct: 53 SWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKG-----N 107
Query: 348 ELDWLARYRIARGMASGLEYLHM--------YHRPCIIHRDIKPANVLIDDGMEARISDF 399
+ W +A M+ GL YLH H+P I HRD K NVL+ + A ++DF
Sbjct: 108 IITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADF 167
Query: 400 GLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS-----DIYSFGVLLAVLV--- 451
GLA G GT Y+APE + ++ D+Y+ G++L LV
Sbjct: 168 GLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRC 227
Query: 452 -VGKFPFDDFFQYTEE 466
P D++ EE
Sbjct: 228 KAADGPVDEYMLPFEE 243
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPP-MAATELLNVRRVLINRKMRQIKSEIITA 302
IGVGA G VYKA P S G +A+K + P + VR V + R++ +
Sbjct: 12 IGVGAYGTVYKARDPHS-GHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE------ 64
Query: 303 GRIWHRNLLPLQ--AHVTRPDCHL---LVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
H N++ L +R D + LV+E + + L+ L + + +
Sbjct: 65 ----HPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD--L 117
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTV 417
R GL++LH CI+HRD+KP N+L+ G +++DFGLA++ ++ + V
Sbjct: 118 MRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAPV 171
Query: 418 AGTTGYVAPEYHQTLTISEKSDIYSFGVLLA 448
T Y APE T + D++S G + A
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFA 202
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 34/206 (16%)
Query: 326 VYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPAN 385
+Y M+ G++ L+ + ++ +D R + M LE +H H+ I+H D+KPAN
Sbjct: 103 IYMVMECGNID--LNSWLKKKKSIDPWERKSYWKNM---LEAVHTIHQHGIVHSDLKPAN 157
Query: 386 VLIDDGMEARISDFGLAKLM-PDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS------ 438
LI DGM ++ DFG+A M PD ++ + V GT Y+ PE + ++ S ++
Sbjct: 158 FLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQV-GTVNYMPPEAIKDMSSSRENGKSKSK 215
Query: 439 -----DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGN 493
D++S G +L + GK PF +N + + +I +P+ I+ +
Sbjct: 216 ISPKSDVWSLGCILYYMTYGKTPFQQI------INQISKLHAII---DPNHEIE---FPD 263
Query: 494 GYEEQMRLVLKIAYFCTSDDPEERPS 519
E+ ++ VLK C DP++R S
Sbjct: 264 IPEKDLQDVLKC---CLKRDPKQRIS 286
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 33/212 (15%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G +G++ +K D M A + L+ +R+ KM+Q ++ + R +L L V+
Sbjct: 199 GGFGEVYGCRKADTGKMYAMKCLDKKRI----KMKQGETLALN-----ERIMLSL---VS 246
Query: 319 RPDCHLLV---YEFMKNGSLQDILHDVSQGRRELDWLARYRI---------ARGMASGLE 366
DC +V Y F L IL D+ G L+++ + A + GLE
Sbjct: 247 TGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 305
Query: 367 YLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAP 426
HM++R +++RD+KPAN+L+D+ RISD GLA ++ + GT GY+AP
Sbjct: 306 --HMHNR-FVVYRDLKPANILLDEHGHVRISDLGLAC----DFSKKKPHASVGTHGYMAP 358
Query: 427 EYHQT-LTISEKSDIYSFGVLLAVLVVGKFPF 457
E Q + +D +S G +L L+ G PF
Sbjct: 359 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 16/144 (11%)
Query: 320 PDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHR 379
P C LV+EFM++G L D L +G + L + + G+ YL C+IHR
Sbjct: 74 PIC--LVFEFMEHGCLSDYLR-TQRGLFAAETL--LGMCLDVCEGMAYLE---EACVIHR 125
Query: 380 DIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT---TGYVAPEYHQTLTISE 436
D+ N L+ + ++SDFG+ + + D + T+ GT + +PE S
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDD----QYTSSTGTKFPVKWASPEVFSFSRYSS 181
Query: 437 KSDIYSFGVLL-AVLVVGKFPFDD 459
KSD++SFGVL+ V GK P+++
Sbjct: 182 KSDVWSFGVLMWEVFSEGKIPYEN 205
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 33/212 (15%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G +G++ +K D M A + L+ +R+ KM+Q ++ + R +L L V+
Sbjct: 200 GGFGEVYGCRKADTGKMYAMKCLDKKRI----KMKQGETLALN-----ERIMLSL---VS 247
Query: 319 RPDCHLLV---YEFMKNGSLQDILHDVSQGRRELDWLARYRI---------ARGMASGLE 366
DC +V Y F L IL D+ G L+++ + A + GLE
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 367 YLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAP 426
HM++R +++RD+KPAN+L+D+ RISD GLA ++ + GT GY+AP
Sbjct: 307 --HMHNR-FVVYRDLKPANILLDEHGHVRISDLGLAC----DFSKKKPHASVGTHGYMAP 359
Query: 427 EYHQT-LTISEKSDIYSFGVLLAVLVVGKFPF 457
E Q + +D +S G +L L+ G PF
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 33/212 (15%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G +G++ +K D M A + L+ +R+ KM+Q ++ + R +L L V+
Sbjct: 200 GGFGEVYGCRKADTGKMYAMKCLDKKRI----KMKQGETLALN-----ERIMLSL---VS 247
Query: 319 RPDCHLLV---YEFMKNGSLQDILHDVSQGRRELDWLARYRI---------ARGMASGLE 366
DC +V Y F L IL D+ G L+++ + A + GLE
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 367 YLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAP 426
HM++R +++RD+KPAN+L+D+ RISD GLA ++ + GT GY+AP
Sbjct: 307 --HMHNR-FVVYRDLKPANILLDEHGHVRISDLGLAC----DFSKKKPHASVGTHGYMAP 359
Query: 427 EYHQT-LTISEKSDIYSFGVLLAVLVVGKFPF 457
E Q + +D +S G +L L+ G PF
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 33/212 (15%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G +G++ +K D M A + L+ +R+ KM+Q ++ + R +L L V+
Sbjct: 200 GGFGEVYGCRKADTGKMYAMKCLDKKRI----KMKQGETLALN-----ERIMLSL---VS 247
Query: 319 RPDCHLLV---YEFMKNGSLQDILHDVSQGRRELDWLARYRI---------ARGMASGLE 366
DC +V Y F L IL D+ G L+++ + A + GLE
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 367 YLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAP 426
HM++R +++RD+KPAN+L+D+ RISD GLA ++ + GT GY+AP
Sbjct: 307 --HMHNR-FVVYRDLKPANILLDEHGHVRISDLGLAC----DFSKKKPHASVGTHGYMAP 359
Query: 427 EYHQT-LTISEKSDIYSFGVLLAVLVVGKFPF 457
E Q + +D +S G +L L+ G PF
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 277 ATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL- 335
A +++N ++ L R ++++ E + H N++ L ++ H LV++ + G L
Sbjct: 33 AAKIINTKK-LSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELF 91
Query: 336 QDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDD---GM 392
+DI+ ++ + + + LE + H+ ++HRD+KP N+L+ G
Sbjct: 92 EDIV--------AREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGA 143
Query: 393 EARISDFGLA-KLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLV 451
+++DFGLA ++ D AGT GY++PE + + DI++ GV+L +L+
Sbjct: 144 AVKLADFGLAIEVQGDQQAWF---GFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILL 200
Query: 452 VGKFPFDDFFQY 463
VG PF D Q+
Sbjct: 201 VGYPPFWDEDQH 212
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 29/199 (14%)
Query: 265 IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHL 324
+AIK I + M+ + + V++ ++ H L+ L
Sbjct: 34 VAIKTIREGAMSEEDFIEEAEVMM---------------KLSHPKLVQLYGVCLEQAPIC 78
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
LV+EFM++G L D L +G + L + + G+ YL C+IHRD+
Sbjct: 79 LVFEFMEHGCLSDYLR-TQRGLFAAETL--LGMCLDVCEGMAYLE---EACVIHRDLAAR 132
Query: 385 NVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT---TGYVAPEYHQTLTISEKSDIY 441
N L+ + ++SDFG+ + + D + T+ GT + +PE S KSD++
Sbjct: 133 NCLVGENQVIKVSDFGMTRFVLDD----QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 442 SFGVLL-AVLVVGKFPFDD 459
SFGVL+ V GK P+++
Sbjct: 189 SFGVLMWEVFSEGKIPYEN 207
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 122/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++A E + +L +G GA G V A G +A+KK+ +P
Sbjct: 1 RPTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRP---FQ 56
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 57 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 105
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 106 GADLNNIVKCAKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 157
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 158 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 206
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 207 CIMAELLTGRTLFPGTD 223
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 16/144 (11%)
Query: 320 PDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHR 379
P C LV+EFM++G L D L +G + L + + G+ YL C+IHR
Sbjct: 79 PIC--LVFEFMEHGCLSDYLR-TQRGLFAAETL--LGMCLDVCEGMAYLE---EACVIHR 130
Query: 380 DIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT---TGYVAPEYHQTLTISE 436
D+ N L+ + ++SDFG+ + + D + T+ GT + +PE S
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDD----QYTSSTGTKFPVKWASPEVFSFSRYSS 186
Query: 437 KSDIYSFGVLL-AVLVVGKFPFDD 459
KSD++SFGVL+ V GK P+++
Sbjct: 187 KSDVWSFGVLMWEVFSEGKIPYEN 210
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 332 NGSLQDILHDVSQGRRELDWLARYR---IARGMASGLEYLHMYHRPCIIHRDIKPANVLI 388
N +LQD++ + L Y + R +ASG+ +LH IIHRD+KP N+L+
Sbjct: 92 NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILV 148
Query: 389 D-------------DGMEARISDFGLAKLMPDGHTRIR--ITTVAGTTGYVAPE------ 427
+ + ISDFGL K + G R + +GT+G+ APE
Sbjct: 149 STSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESN 208
Query: 428 -YHQTLTISEKSDIYSFG-VLLAVLVVGKFPFDDFFQYTEEMNMVR 471
++ DI+S G V +L GK PF D +Y+ E N++R
Sbjct: 209 NLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD--KYSRESNIIR 252
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 29/199 (14%)
Query: 265 IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHL 324
+AIK I + M+ + + V++ ++ H L+ L
Sbjct: 54 VAIKTIKEGSMSEDDFIEEAEVMM---------------KLSHPKLVQLYGVCLEQAPIC 98
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
LV+EFM++G L D L +G + L + + G+ YL C+IHRD+
Sbjct: 99 LVFEFMEHGCLSDYLR-TQRGLFAAETL--LGMCLDVCEGMAYLE---EACVIHRDLAAR 152
Query: 385 NVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT---TGYVAPEYHQTLTISEKSDIY 441
N L+ + ++SDFG+ + + D + T+ GT + +PE S KSD++
Sbjct: 153 NCLVGENQVIKVSDFGMTRFVLDD----QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 208
Query: 442 SFGVLL-AVLVVGKFPFDD 459
SFGVL+ V GK P+++
Sbjct: 209 SFGVLMWEVFSEGKIPYEN 227
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPP-MAATELLNVRRVLINRKMRQIKSEIITA 302
IGVGA G VYKA P S G +A+K + P + VR V + R++ +
Sbjct: 12 IGVGAYGTVYKARDPHS-GHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE------ 64
Query: 303 GRIWHRNLLPLQ--AHVTRPDCHL---LVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
H N++ L +R D + LV+E + + L+ L + + +
Sbjct: 65 ----HPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD--L 117
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTV 417
R GL++LH CI+HRD+KP N+L+ G +++DFGLA++ ++ + V
Sbjct: 118 MRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPV 171
Query: 418 AGTTGYVAPEYHQTLTISEKSDIYSFGVLLA 448
T Y APE T + D++S G + A
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFA 202
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 102/240 (42%), Gaps = 41/240 (17%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRV-LINRK-MRQIKSEIITAGRIWHRNLLPLQAH 316
GSYG + + + A +++N ++ IN K + +IK+E+ ++ H N+ L
Sbjct: 37 GSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEV 96
Query: 317 VTRPDCHLLVYEFMKNGSLQDILH---DVSQG---------------------------- 345
LV E G L D L+ D S G
Sbjct: 97 YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHG 156
Query: 346 -RRELDWLARYR-IARGMASGLEYLHMYHRPCIIHRDIKPANVLI--DDGMEARISDFGL 401
R LD++ R + I+ M LH H I HRDIKP N L + E ++ DFGL
Sbjct: 157 FRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGL 216
Query: 402 AK--LMPDGHTRIRITTVAGTTGYVAPEYHQTLTIS--EKSDIYSFGVLLAVLVVGKFPF 457
+K + +TT AGT +VAPE T S K D +S GVLL +L++G PF
Sbjct: 217 SKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 100
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V G R + AR+ A+ + EYLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 159
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R T+ GT Y+APE
Sbjct: 160 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEII 211
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 83/164 (50%), Gaps = 20/164 (12%)
Query: 307 HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLE 366
HRN+L L D LV+E M+ GS+ +H RR + L + + +AS L+
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHK----RRHFNELEASVVVQDVASALD 125
Query: 367 YLHMYHRPCIIHRDIKPANVLIDDGME---ARISDFGLA---KLMPDGH--TRIRITTVA 418
+L H I HRD+KP N+L + + +I DFGL KL D + + T
Sbjct: 126 FL---HNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC 182
Query: 419 GTTGYVAPE----YHQTLTISEK-SDIYSFGVLLAVLVVGKFPF 457
G+ Y+APE + + +I +K D++S GV+L +L+ G PF
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG G G VY + + GK I A + LN R+ ++ Q +E I
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIH---------CAVKSLN--RITDIGEVSQFLTEGII 82
Query: 302 AGRIWHRNLLPLQAHVTRPD-CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
H N+L L R + L+V +MK+G L++ + + + D +
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQ 139
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G+++L +HRD+ N ++D+ +++DFGLA+ M D +V
Sbjct: 140 VAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK----EFDSVHNK 192
Query: 421 TG------YVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDD 459
TG ++A E QT + KSD++SFGVLL L+ G P+ D
Sbjct: 193 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 238
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 16/203 (7%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G+YG+++ K A +++ V + E+ ++ H N++ L
Sbjct: 15 GAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFE 74
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
+ LV E + G L D + + Q E+D I + + SG YLH ++ I+H
Sbjct: 75 DKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAV---IMKQVLSGTTYLHKHN---IVH 127
Query: 379 RDIKPANVLIDDGME---ARISDFGL-AKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI 434
RD+KP N+L++ +I DFGL A G + R+ GT Y+APE +
Sbjct: 128 RDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL----GTAYYIAPEVLRK-KY 182
Query: 435 SEKSDIYSFGVLLAVLVVGKFPF 457
EK D++S GV+L +L+ G PF
Sbjct: 183 DEKCDVWSCGVILYILLCGYPPF 205
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG G G VY + + GK I A + LN R+ ++ Q +E I
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIH---------CAVKSLN--RITDIGEVSQFLTEGII 85
Query: 302 AGRIWHRNLLPLQAHVTRPD-CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
H N+L L R + L+V +MK+G L++ + + + D +
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQ 142
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G+++L +HRD+ N ++D+ +++DFGLA+ M D +V
Sbjct: 143 VAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK----EFDSVHNK 195
Query: 421 TG------YVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDD 459
TG ++A E QT + KSD++SFGVLL L+ G P+ D
Sbjct: 196 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 241
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 17/210 (8%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++ + KI A +++N ++ L R ++++ E + H N++ L ++
Sbjct: 15 GAFSVVRRCMKIPTGQEYAAKIINTKK-LSARDHQKLEREARICRLLKHPNIVRLHDSIS 73
Query: 319 RPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCII 377
H LV++ + G L +DI+ ++ + + + LE ++ H I+
Sbjct: 74 EEGFHYLVFDLVTGGELFEDIV--------AREYYSEADASHCIQQILESVNHCHLNGIV 125
Query: 378 HRDIKPANVLI---DDGMEARISDFGLA-KLMPDGHTRIRITTVAGTTGYVAPEYHQTLT 433
HRD+KP N+L+ G +++DFGLA ++ D AGT GY++PE +
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF---GFAGTPGYLSPEVLRKDP 182
Query: 434 ISEKSDIYSFGVLLAVLVVGKFPFDDFFQY 463
+ D+++ GV+L +L+VG PF D Q+
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQH 212
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 88/210 (41%), Gaps = 42/210 (20%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATEL-LNVRRVLINRKMRQ 294
D+L LE+IG G G VYK +D+ P+A R+ IN K
Sbjct: 13 DNLKLLELIGRGRYGAVYKG-------------SLDERPVAVKVFSFANRQNFINEK--- 56
Query: 295 IKSEIITAGRIWHRNLLPLQAHVTRPDC-----HLLVYEFMKNGSLQDILHDVSQGRREL 349
I + H N+ R +LLV E+ NGSL L +
Sbjct: 57 ---NIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----- 108
Query: 350 DWLARYRIARGMASGLEYLHM------YHRPCIIHRDIKPANVLIDDGMEARISDFGLA- 402
DW++ R+A + GL YLH +++P I HRD+ NVL+ + ISDFGL+
Sbjct: 109 DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSM 168
Query: 403 -----KLMPDGHTRIRITTVAGTTGYVAPE 427
+L+ G + GT Y+APE
Sbjct: 169 RLTGNRLVRPGEEDNAAISEVGTIRYMAPE 198
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG G G VY + + GK I A + LN R+ ++ Q +E I
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIH---------CAVKSLN--RITDIGEVSQFLTEGII 85
Query: 302 AGRIWHRNLLPLQAHVTRPD-CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
H N+L L R + L+V +MK+G L++ + + + D +
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQ 142
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G+++L +HRD+ N ++D+ +++DFGLA+ M D +V
Sbjct: 143 VAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMLDK----EFDSVHNK 195
Query: 421 TG------YVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDD 459
TG ++A E QT + KSD++SFGVLL L+ G P+ D
Sbjct: 196 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 241
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 32/205 (15%)
Query: 326 VYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPAN 385
+Y M+ G++ L+ + ++ +D R + M LE +H H+ I+H D+KPAN
Sbjct: 131 IYMVMECGNID--LNSWLKKKKSIDPWERKSYWKNM---LEAVHTIHQHGIVHSDLKPAN 185
Query: 386 VLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS------- 438
LI DGM ++ DFG+A M T + + G Y+ PE + ++ S ++
Sbjct: 186 FLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKI 244
Query: 439 ----DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNG 494
D++S G +L + GK PF +N + + +I +P+ I+ +
Sbjct: 245 SPKSDVWSLGCILYYMTYGKTPFQQI------INQISKLHAII---DPNHEIE---FPDI 292
Query: 495 YEEQMRLVLKIAYFCTSDDPEERPS 519
E+ ++ VLK C DP++R S
Sbjct: 293 PEKDLQDVLKC---CLKRDPKQRIS 314
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 38 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 85
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V G R + AR+ A+ + EYLH
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 144
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R T+ GT Y+APE
Sbjct: 145 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGTPEYLAPEII 196
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 197 LSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPP-MAATELLNVRRVLINRKMRQIKSEIITA 302
IGVGA G VYKA P S G +A+K + P + VR V + R++ +
Sbjct: 12 IGVGAYGTVYKARDPHS-GHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE------ 64
Query: 303 GRIWHRNLLPLQ--AHVTRPDCHL---LVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
H N++ L +R D + LV+E + + L+ L + + +
Sbjct: 65 ----HPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD--L 117
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTV 417
R GL++LH CI+HRD+KP N+L+ G +++DFGLA++ ++ + V
Sbjct: 118 MRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPV 171
Query: 418 AGTTGYVAPEYHQTLTISEKSDIYSFGVLLA 448
T Y APE T + D++S G + A
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFA 202
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 17/210 (8%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++ + KI A +++N ++ L R ++++ E + H N++ L ++
Sbjct: 15 GAFSVVRRCMKIPTGQEYAAKIINTKK-LSARDHQKLEREARICRLLKHPNIVRLHDSIS 73
Query: 319 RPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCII 377
H LV++ + G L +DI+ ++ + + + LE ++ H I+
Sbjct: 74 EEGFHYLVFDLVTGGELFEDIV--------AREYYSEADASHCIQQILESVNHCHLNGIV 125
Query: 378 HRDIKPANVLI---DDGMEARISDFGLA-KLMPDGHTRIRITTVAGTTGYVAPEYHQTLT 433
HRD+KP N+L+ G +++DFGLA ++ D AGT GY++PE +
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF---GFAGTPGYLSPEVLRKDP 182
Query: 434 ISEKSDIYSFGVLLAVLVVGKFPFDDFFQY 463
+ D+++ GV+L +L+VG PF D Q+
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQH 212
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG G G VY + + GK I A + LN R+ ++ Q +E I
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIH---------CAVKSLN--RITDIGEVSQFLTEGII 89
Query: 302 AGRIWHRNLLPLQAHVTRPD-CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
H N+L L R + L+V +MK+G L++ + + + D +
Sbjct: 90 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQ 146
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G+++L +HRD+ N ++D+ +++DFGLA+ M D +V
Sbjct: 147 VAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK----EFDSVHNK 199
Query: 421 TG------YVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDD 459
TG ++A E QT + KSD++SFGVLL L+ G P+ D
Sbjct: 200 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 245
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG G G VY + + GK I A + LN R+ ++ Q +E I
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIH---------CAVKSLN--RITDIGEVSQFLTEGII 143
Query: 302 AGRIWHRNLLPLQAHVTRPD-CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
H N+L L R + L+V +MK+G L++ + + + D +
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQ 200
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G+++L +HRD+ N ++D+ +++DFGLA+ M D +V
Sbjct: 201 VAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK----EFDSVHNK 253
Query: 421 TG------YVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDD 459
TG ++A E QT + KSD++SFGVLL L+ G P+ D
Sbjct: 254 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 299
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG G G VY + + GK I A + LN R+ ++ Q +E I
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIH---------CAVKSLN--RITDIGEVSQFLTEGII 84
Query: 302 AGRIWHRNLLPLQAHVTRPD-CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
H N+L L R + L+V +MK+G L++ + + + D +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQ 141
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G+++L +HRD+ N ++D+ +++DFGLA+ M D +V
Sbjct: 142 VAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK----EFDSVHNK 194
Query: 421 TG------YVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDD 459
TG ++A E QT + KSD++SFGVLL L+ G P+ D
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 29/226 (12%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E+IG G G VY + + GK I A + LN R+ ++ Q +E I
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIH---------CAVKSLN--RITDIGEVSQFLTEGII 84
Query: 302 AGRIWHRNLLPLQAHVTRPD-CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
H N+L L R + L+V +MK+G L++ + + + D +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIG---FGLQ 141
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G+++L +HRD+ N ++D+ +++DFGLA+ M D +V
Sbjct: 142 VAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK----EFDSVHNK 194
Query: 421 TG------YVAPEYHQTLTISEKSDIYSFGVLLAVLVV-GKFPFDD 459
TG ++A E QT + KSD++SFGVLL L+ G P+ D
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 10/200 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSE-IITAGRIWHRNLLPLQAHV 317
GS+GK++ + + A ++L + +L ++ + I SE + + H L+ L
Sbjct: 49 GSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF 108
Query: 318 TRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCII 377
D V +++ G L + + + R L+ AR+ A +AS L YLH + I+
Sbjct: 109 QTADKLYFVLDYINGGEL---FYHLQRERCFLEPRARFYAAE-IASALGYLHSLN---IV 161
Query: 378 HRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
+RD+KP N+L+D ++DFGL K + ++ +T GT Y+APE
Sbjct: 162 YRDLKPENILLDSQGHIVLTDFGLCKENIEHNS--TTSTFCGTPEYLAPEVLHKQPYDRT 219
Query: 438 SDIYSFGVLLAVLVVGKFPF 457
D + G +L ++ G PF
Sbjct: 220 VDWWCLGAVLYEMLYGLPPF 239
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 101/234 (43%), Gaps = 20/234 (8%)
Query: 227 RDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRV 286
+ + L E L LE +G G+ GVV + E GK +++ A + L +
Sbjct: 9 QSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLKPDVL 59
Query: 287 LINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGR 346
M E+ + HRNL+ L V P + V E GSL D L QG
Sbjct: 60 SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGH 117
Query: 347 RELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMP 406
L L+RY + +A G+ YL IHRD+ N+L+ +I DFGL + +P
Sbjct: 118 FLLGTLSRYAVQ--VAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALP 172
Query: 407 --DGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPF 457
D H ++ + APE +T T S SD + FGV L + G+ P+
Sbjct: 173 QNDDHXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 225
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 100/232 (43%), Gaps = 20/232 (8%)
Query: 229 IAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLI 288
+ L E L LE +G G+ GVV + E GK +++ A + L +
Sbjct: 1 LTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLKPDVLSQ 51
Query: 289 NRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRE 348
M E+ + HRNL+ L V P + V E GSL D L QG
Sbjct: 52 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFL 109
Query: 349 LDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMP-- 406
L L+RY + +A G+ YL IHRD+ N+L+ +I DFGL + +P
Sbjct: 110 LGTLSRYAVQ--VAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164
Query: 407 DGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPF 457
D H ++ + APE +T T S SD + FGV L + G+ P+
Sbjct: 165 DDHXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 15/219 (6%)
Query: 262 GKMIAIKKIDQPPMAATELL---NVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
K A+KK ++ + N ++ I K K+E+ I + L + +T
Sbjct: 54 NKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIIT 113
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYR----IARGMASGLEYLHMYHRP 374
D ++YE+M+N S+ + + I + + + Y+H
Sbjct: 114 NYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNI 173
Query: 375 CIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEY--HQTL 432
C HRD+KP+N+L+D ++SDFG ++ M D +I GT ++ PE+ +++
Sbjct: 174 C--HRDVKPSNILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESS 227
Query: 433 TISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVR 471
K DI+S G+ L V+ PF E N +R
Sbjct: 228 YNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIR 266
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 94/175 (53%), Gaps = 19/175 (10%)
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPD-CHL-LVYEFMKNGSLQDI--LHDVSQGRR 347
+ Q+ EI ++ H N++ L + P+ HL +V+E + G + ++ L +S+ +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQ- 138
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
AR+ + + G+EYLH Y + IIHRDIKP+N+L+ + +I+DFG++
Sbjct: 139 -----ARFYF-QDLIKGIEYLH-YQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEF-K 188
Query: 408 GHTRIRITTVAGTTGYVAPE-YHQTLTI--SEKSDIYSFGVLLAVLVVGKFPFDD 459
G + TV GT ++APE +T I + D+++ GV L V G+ PF D
Sbjct: 189 GSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 114/245 (46%), Gaps = 29/245 (11%)
Query: 220 ARPIFKKRDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATE 279
A+P K L +ED L++IG GA G V ++ + K+ A+K +++ E
Sbjct: 59 AKPFTSKVKQMRLHRED-FEILKVIGRGAFGEVAVVKLKNA-DKVFAMKILNK-----WE 111
Query: 280 LLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDI 338
+L R+ R + ++ W L + + D +L LV ++ G L +
Sbjct: 112 MLKRAETACFREERDV---LVNGDSKWITTL----HYAFQDDNNLYLVMDYYVGGDLLTL 164
Query: 339 LHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISD 398
L R + +AR+ +A M ++ +H H +HRDIKP N+L+D R++D
Sbjct: 165 LSKFED--RLPEEMARFYLAE-MVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLAD 218
Query: 399 FG-LAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLT-----ISEKSDIYSFGVLLAVLVV 452
FG KLM DG ++ + GT Y++PE Q + + D +S GV + ++
Sbjct: 219 FGSCLKLMEDG--TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLY 276
Query: 453 GKFPF 457
G+ PF
Sbjct: 277 GETPF 281
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 16/203 (7%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G+YG+++ K A +++ V + E+ ++ H N++ L
Sbjct: 32 GAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFE 91
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
+ LV E + G L D + + Q E+D I + + SG YLH ++ I+H
Sbjct: 92 DKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAV---IMKQVLSGTTYLHKHN---IVH 144
Query: 379 RDIKPANVLIDDGME---ARISDFGL-AKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI 434
RD+KP N+L++ +I DFGL A G + R+ GT Y+APE +
Sbjct: 145 RDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL----GTAYYIAPEVLRK-KY 199
Query: 435 SEKSDIYSFGVLLAVLVVGKFPF 457
EK D++S GV+L +L+ G PF
Sbjct: 200 DEKCDVWSCGVILYILLCGYPPF 222
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 115/242 (47%), Gaps = 24/242 (9%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK-MRQ 294
D +E IG GA GVV A + G+ +AIKKI P A + N +R L K ++
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLT-GQQVAIKKI---PNAFDVVTNAKRTLRELKILKH 110
Query: 295 IKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLAR 354
K + I A + R +P + +V + M++ L I+H E
Sbjct: 111 FKHDNIIAIKDILRPTVPYGEFKSV----YVVLDLMES-DLHQIIHSSQPLTLEHVRYFL 165
Query: 355 YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM---PDGHTR 411
Y++ RG L+Y+H +IHRD+KP+N+L+++ E +I DFG+A+ + P H
Sbjct: 166 YQLLRG----LKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
Query: 412 IRITTVAGTTGYVAPEYHQTL-TISEKSDIYSFGVLLAVLVVGK--FPFDDFFQYTEEMN 468
+T T Y APE +L ++ D++S G + ++ + FP ++ + +
Sbjct: 219 F-MTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIM 277
Query: 469 MV 470
MV
Sbjct: 278 MV 279
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 101/234 (43%), Gaps = 20/234 (8%)
Query: 227 RDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRV 286
+ + L E L LE +G G+ GVV + E GK +++ A + L +
Sbjct: 9 QSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLKPDVL 59
Query: 287 LINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGR 346
M E+ + HRNL+ L V P + V E GSL D L QG
Sbjct: 60 SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGH 117
Query: 347 RELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMP 406
L L+RY + +A G+ YL IHRD+ N+L+ +I DFGL + +P
Sbjct: 118 FLLGTLSRYAVQ--VAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALP 172
Query: 407 --DGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPF 457
D H ++ + APE +T T S SD + FGV L + G+ P+
Sbjct: 173 QNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 225
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 115/242 (47%), Gaps = 24/242 (9%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK-MRQ 294
D +E IG GA GVV A + G+ +AIKKI P A + N +R L K ++
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLT-GQQVAIKKI---PNAFDVVTNAKRTLRELKILKH 109
Query: 295 IKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLAR 354
K + I A + R +P + +V + M++ L I+H E
Sbjct: 110 FKHDNIIAIKDILRPTVPYGEFKSV----YVVLDLMES-DLHQIIHSSQPLTLEHVRYFL 164
Query: 355 YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM---PDGHTR 411
Y++ RG L+Y+H +IHRD+KP+N+L+++ E +I DFG+A+ + P H
Sbjct: 165 YQLLRG----LKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 412 IRITTVAGTTGYVAPEYHQTL-TISEKSDIYSFGVLLAVLVVGK--FPFDDFFQYTEEMN 468
+T T Y APE +L ++ D++S G + ++ + FP ++ + +
Sbjct: 218 F-MTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIM 276
Query: 469 MV 470
MV
Sbjct: 277 MV 278
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 101/234 (43%), Gaps = 20/234 (8%)
Query: 227 RDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRV 286
+ + L E L LE +G G+ GVV + E GK +++ A + L +
Sbjct: 3 QSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLKPDVL 53
Query: 287 LINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGR 346
M E+ + HRNL+ L V P + V E GSL D L QG
Sbjct: 54 SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGH 111
Query: 347 RELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMP 406
L L+RY + +A G+ YL IHRD+ N+L+ +I DFGL + +P
Sbjct: 112 FLLGTLSRYAVQ--VAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALP 166
Query: 407 --DGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPF 457
D H ++ + APE +T T S SD + FGV L + G+ P+
Sbjct: 167 QNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 219
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 111/240 (46%), Gaps = 50/240 (20%)
Query: 238 LASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
L L +G GA G V A + +A+KK+ +P L++ RR R++R +K
Sbjct: 30 LQGLRPVGSGAYGSVCSA-YDARLRQKVAVKKLSRP---FQSLIHARRTY--RELRLLK- 82
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELD 350
+ H N++ L V P + LV M L +I+ + +
Sbjct: 83 ------HLKHENVIGL-LDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKSQALSDEHVQ 134
Query: 351 WLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHT 410
+L Y++ RG L+Y+H IIHRD+KP+NV +++ E RI DFGLA+ +
Sbjct: 135 FLV-YQLLRG----LKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE--- 183
Query: 411 RIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDFF 461
+T T Y APE Y+QT+ DI+S G ++A L+ GK FP D+
Sbjct: 184 --EMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLQGKALFPGSDYI 235
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R +AGT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 100/232 (43%), Gaps = 20/232 (8%)
Query: 229 IAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLI 288
+ L E L LE +G G+ GVV + E GK +++ A + L +
Sbjct: 1 LTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLKPDVLSQ 51
Query: 289 NRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRE 348
M E+ + HRNL+ L V P + V E GSL D L QG
Sbjct: 52 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFL 109
Query: 349 LDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMP-- 406
L L+RY + +A G+ YL IHRD+ N+L+ +I DFGL + +P
Sbjct: 110 LGTLSRYAVQ--VAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164
Query: 407 DGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPF 457
D H ++ + APE +T T S SD + FGV L + G+ P+
Sbjct: 165 DDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 101/234 (43%), Gaps = 20/234 (8%)
Query: 227 RDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRV 286
+ + L E L LE +G G+ GVV + E GK +++ A + L +
Sbjct: 3 QSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLKPDVL 53
Query: 287 LINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGR 346
M E+ + HRNL+ L V P + V E GSL D L QG
Sbjct: 54 SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGH 111
Query: 347 RELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMP 406
L L+RY + +A G+ YL IHRD+ N+L+ +I DFGL + +P
Sbjct: 112 FLLGTLSRYAVQ--VAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALP 166
Query: 407 --DGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPF 457
D H ++ + APE +T T S SD + FGV L + G+ P+
Sbjct: 167 QNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 219
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 100/232 (43%), Gaps = 20/232 (8%)
Query: 229 IAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLI 288
+ L E L LE +G G+ GVV + E GK +++ A + L +
Sbjct: 1 LTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV---------AVKCLKPDVLSQ 51
Query: 289 NRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRE 348
M E+ + HRNL+ L V P + V E GSL D L QG
Sbjct: 52 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFL 109
Query: 349 LDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMP-- 406
L L+RY + +A G+ YL IHRD+ N+L+ +I DFGL + +P
Sbjct: 110 LGTLSRYAVQ--VAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164
Query: 407 DGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPF 457
D H ++ + APE +T T S SD + FGV L + G+ P+
Sbjct: 165 DDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKXQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 XELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 107/244 (43%), Gaps = 35/244 (14%)
Query: 217 AICARPIFKKRDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSY-GKMIAIKKIDQPPM 275
++ A+ F + A KE L L+ IG G G V + G Y G +A+K I
Sbjct: 4 SVAAQDEFYRSGWALNMKE--LKLLQTIGKGEFGDV----MLGDYRGNKVAVKCIKNDAT 57
Query: 276 AATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGS 334
A L ++ ++T R H NL+ L + L +V E+M GS
Sbjct: 58 AQAFL--------------AEASVMTQLR--HSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101
Query: 335 LQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEA 394
L D L S+GR L + + + +EYL + +HRD+ NVL+ + A
Sbjct: 102 LVDYLR--SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVA 156
Query: 395 RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVG 453
++SDFGL K ++ + APE + S KSD++SFG+LL + G
Sbjct: 157 KVSDFGLTKEASSTQDTGKL-----PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 211
Query: 454 KFPF 457
+ P+
Sbjct: 212 RVPY 215
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 100
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V G R + AR+ A+ + EYLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLH 159
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 160 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 211
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKXQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 30/221 (13%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQP-PMAATELLNVRRVLINRKMRQIKSEI 299
LE +G GA GVV++ V + G++ K I+ P P+ +K+EI
Sbjct: 56 LEELGSGAFGVVHRC-VEKATGRVFVAKFINTPYPLDKY---------------TVKNEI 99
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIAR 359
++ H L+ L +L+ EF+ G L D + E + + R A
Sbjct: 100 SIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQA- 158
Query: 360 GMASGLEYLHMYHRPCIIHRDIKPANVLID--DGMEARISDFGLA-KLMPDGHTRIRITT 416
GL+++H + I+H DIKP N++ + +I DFGLA KL PD +++TT
Sbjct: 159 --CEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD--EIVKVTT 211
Query: 417 VAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T + APE + +D+++ GVL VL+ G PF
Sbjct: 212 --ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 277 ATELLNVRRVLINRKMRQ-IKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL 335
A EL+ V+ + K+ + +K EII + H N++ + + P +V E+ G L
Sbjct: 43 ANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 336 QDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEAR 395
+ + + GR D AR+ + + SG+ Y H + HRD+K N L+D R
Sbjct: 103 FERI--CNAGRFSEDE-ARF-FFQQLISGVSYAHAMQ---VAHRDLKLENTLLDGSPAPR 155
Query: 396 --ISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK-SDIYSFGVLLAVLVV 452
I+DFG +K H++ + + GT Y+APE K +D++S GV L V++V
Sbjct: 156 LKIADFGYSKASV-LHSQPK--SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
Query: 453 GKFPFDD 459
G +PF+D
Sbjct: 213 GAYPFED 219
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L IG GA G V A G +A+KK+ +P
Sbjct: 10 RPTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 65
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 66 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 114
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 115 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 166
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 167 XELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 215
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 216 CIMAELLTGRTLFPGTD 232
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 16/144 (11%)
Query: 320 PDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHR 379
P C LV EFM++G L D L +G + L + + G+ YL C+IHR
Sbjct: 77 PIC--LVTEFMEHGCLSDYLR-TQRGLFAAETL--LGMCLDVCEGMAYLE---EACVIHR 128
Query: 380 DIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT---TGYVAPEYHQTLTISE 436
D+ N L+ + ++SDFG+ + + D + T+ GT + +PE S
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDD----QYTSSTGTKFPVKWASPEVFSFSRYSS 184
Query: 437 KSDIYSFGVLL-AVLVVGKFPFDD 459
KSD++SFGVL+ V GK P+++
Sbjct: 185 KSDVWSFGVLMWEVFSEGKIPYEN 208
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 98/191 (51%), Gaps = 15/191 (7%)
Query: 277 ATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL- 335
A +++N ++ L R ++++ E + H N++ L ++ H L+++ + G L
Sbjct: 51 AAKIINTKK-LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELF 109
Query: 336 QDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDD---GM 392
+DI+ ++ + + + LE + H+ ++HRD+KP N+L+ G
Sbjct: 110 EDIV--------AREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGA 161
Query: 393 EARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV 452
+++DFGLA + +G + AGT GY++PE + + D+++ GV+L +L+V
Sbjct: 162 AVKLADFGLA-IEVEGEQQAWFG-FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV 219
Query: 453 GKFPFDDFFQY 463
G PF D Q+
Sbjct: 220 GYPPFWDEDQH 230
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT-FEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 11 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRP---FQ 66
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 67 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 115
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 116 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 167
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 168 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 216
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 217 CIMAELLTGRTLFPGTD 233
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 39 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 86
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + + EYLH
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLH 145
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID+ +++DFG AK + R + GT Y+APE
Sbjct: 146 SLD---LIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 197
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 198 LSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 100
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V G R + AR+ A+ + EYLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 159
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 160 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 211
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L Y F N +L ++ V G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 24 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRP---FQ 79
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 80 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 128
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 129 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 180
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 181 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 229
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 230 CIMAELLTGRTLFPGTD 246
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 122/250 (48%), Gaps = 38/250 (15%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V + S G IA+KK+ +P
Sbjct: 34 RPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKS-GLKIAVKKLSRP---FQ 89
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYE--FMKNGSLQ 336
+++ +R R++R +K + H N++ L V P L + ++ +
Sbjct: 90 SIIHAKRTY--RELRLLK-------HMKHENVIGL-LDVFTPATSLEEFNDVYLVTHLMG 139
Query: 337 DILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARI 396
L+++ + ++ D ++ I + + GL+Y+H IIHRD+KP+N+ +++ E +I
Sbjct: 140 ADLNNIVKCQKLTDDHVQFLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 195
Query: 397 SDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-----YHQTLTISEKSDIYSFGVLLAVLV 451
DFGLA+ HT +T T Y APE H +T+ DI+S G ++A L+
Sbjct: 196 LDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNMTV----DIWSVGCIMAELL 246
Query: 452 VGK--FPFDD 459
G+ FP D
Sbjct: 247 TGRTLFPGTD 256
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 98/224 (43%), Gaps = 34/224 (15%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
L+ IG GA G+V A G +A+KK+ +P T R E++
Sbjct: 27 LKPIGSGAQGIVCAA-FDTVLGINVAVKKLSRPFQNQTHAKRAYR------------ELV 73
Query: 301 TAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWLA 353
+ H+N++ L +V P L LV E M + +L ++H ELD
Sbjct: 74 LLKCVNHKNIISL-LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIH------MELDHER 125
Query: 354 RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIR 413
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 126 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFM 179
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+T T Y APE + E DI+S G ++ LV G F
Sbjct: 180 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIF 223
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L Y F N +L ++ V G R + AR+ A+ + + EYLH
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 47 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 94
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + EYLH
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLH 153
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 154 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 205
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 206 LSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 17 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSKP---FQ 72
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 73 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 121
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 122 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 173
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 174 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 222
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 223 CIMAELLTGRTLFPGTD 239
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 111/240 (46%), Gaps = 50/240 (20%)
Query: 238 LASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
L L +G GA G V A + +A+KK+ +P L++ RR R++R +K
Sbjct: 30 LQGLRPVGSGAYGSVCSA-YDARLRQKVAVKKLSRP---FQSLIHARRTY--RELRLLK- 82
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELD 350
+ H N++ L V P + LV M L +I+ + +
Sbjct: 83 ------HLKHENVIGL-LDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSDEHVQ 134
Query: 351 WLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHT 410
+L Y++ RG L+Y+H IIHRD+KP+NV +++ E RI DFGLA+ +
Sbjct: 135 FLV-YQLLRG----LKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE--- 183
Query: 411 RIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDFF 461
+T T Y APE Y+QT+ DI+S G ++A L+ GK FP D+
Sbjct: 184 --EMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLQGKALFPGSDYI 235
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 25 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRP---FQ 80
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 81 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 129
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 130 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 181
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 182 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 230
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 231 CIMAELLTGRTLFPGTD 247
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V G R + AR+ A+ + + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 49/228 (21%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G GA G V A + G+ +AIKK+ +P + + R R E++
Sbjct: 32 VGSGAYGSVCSA-IDKRSGEKVAIKKLSRPFQS--------EIFAKRAYR----ELLLLK 78
Query: 304 RIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWLARYR 356
+ H N++ L V P L LV FM+ LQ I+ G + + +Y
Sbjct: 79 HMQHENVIGL-LDVFTPASSLRNFYDFYLVMPFMQT-DLQKIM-----GLKFSEEKIQYL 131
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITT 416
+ + M GL+Y+H ++HRD+KP N+ +++ E +I DFGLA+ H +T
Sbjct: 132 VYQ-MLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTG 182
Query: 417 VAGTTGYVAPE-------YHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T Y APE Y+QT+ DI+S G ++A ++ GK F
Sbjct: 183 YVVTRWYRAPEVILSWMHYNQTV------DIWSVGCIMAEMLTGKTLF 224
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++GK+I +++ A ++L ++ ++ +E H L L+
Sbjct: 19 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 78
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D V E+ G L +S+ R + AR+ A + S LEYLH +++
Sbjct: 79 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 131
Query: 379 RDIKPANVLIDDGMEARISDFGLAKL-MPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RDIK N+++D +I+DFGL K + DG T + T GT Y+APE +
Sbjct: 132 RDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKTFCGTPEYLAPEVLEDNDYGRA 188
Query: 438 SDIYSFGVLLAVLVVGKFPF 457
D + GV++ ++ G+ PF
Sbjct: 189 VDWWGLGVVMYEMMCGRLPF 208
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++GK+I +++ A ++L ++ ++ +E H L L+
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D V E+ G L +S+ R + AR+ A + S LEYLH +++
Sbjct: 76 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 128
Query: 379 RDIKPANVLIDDGMEARISDFGLAKL-MPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RDIK N+++D +I+DFGL K + DG T + T GT Y+APE +
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKTFCGTPEYLAPEVLEDNDYGRA 185
Query: 438 SDIYSFGVLLAVLVVGKFPF 457
D + GV++ ++ G+ PF
Sbjct: 186 VDWWGLGVVMYEMMCGRLPF 205
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 15 RPTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRP---FQ 70
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 71 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 119
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 120 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 171
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 172 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 220
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 221 CIMAELLTGRTLFPGTD 237
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 12 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 67
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 68 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 116
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 117 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 168
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 169 CELKILDFGLAR-----HTADEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 217
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 218 CIMAELLTGRTLFPGTD 234
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 16 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 71
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 72 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 120
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 121 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 172
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 173 XELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 221
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 222 CIMAELLTGRTLFPGTD 238
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 17 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 72
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 73 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 121
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 122 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 173
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 174 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 222
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 223 CIMAELLTGRTLFPGTD 239
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 17 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 72
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 73 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 121
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 122 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 173
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 174 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 222
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 223 CIMAELLTGRTLFPGTD 239
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 73 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 120
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + EYLH
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLH 179
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 180 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 231
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 232 LSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 10 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 65
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 66 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 114
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 115 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 166
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 167 XELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 215
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 216 CIMAELLTGRTLFPGTD 232
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L Y F N +L ++ V G R + AR+ A+ + + EYLH
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 122/262 (46%), Gaps = 52/262 (19%)
Query: 216 PAICARPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQP 273
P RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 2 PMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP 60
Query: 274 PMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLV 326
+++ +R R++R +K + H N++ P ++ D +L+
Sbjct: 61 ---FQSIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 327 YEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANV 386
+ + L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+
Sbjct: 109 H--LMGADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNL 158
Query: 387 LIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSD 439
+++ E +I DFGLA+ HT +T T Y APE Y+QT+ D
Sbjct: 159 AVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------D 207
Query: 440 IYSFGVLLAVLVVGK--FPFDD 459
I+S G ++A L+ G+ FP D
Sbjct: 208 IWSVGCIMAELLTGRTLFPGTD 229
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 7 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 62
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 63 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 111
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 112 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 163
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 164 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 212
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 213 CIMAELLTGRTLFPGTD 229
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 14/187 (7%)
Query: 277 ATELLNVRRVLINRKMRQ-IKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL 335
+ EL+ V+ + K+ + +K EII + H N++ + + P +V E+ G L
Sbjct: 42 SNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 101
Query: 336 QDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEAR 395
+ + + GR D AR+ + + SG+ Y H + HRD+K N L+D R
Sbjct: 102 FERI--CNAGRFSEDE-ARFFFQQ-LISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPR 154
Query: 396 --ISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK-SDIYSFGVLLAVLVV 452
I DFG +K + + GT Y+APE K +D++S GV L V++V
Sbjct: 155 LKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 211
Query: 453 GKFPFDD 459
G +PF+D
Sbjct: 212 GAYPFED 218
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 27/221 (12%)
Query: 238 LASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
LA+ IG G+ G+V A + GK +A+KK+D ELL +
Sbjct: 47 LANFIKIGEGSTGIVCIATEKHT-GKQVAVKKMDLRKQQRRELLF--------------N 91
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
E++ H N++ + + D +V EF++ G+L DI V+ R + +I
Sbjct: 92 EVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI---VTHTR-----MNEEQI 143
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGL-AKLMPDGHTRIRITT 416
A S L L H +IHRDIK ++L+ ++SDFG A++ + R
Sbjct: 144 ATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR---KX 200
Query: 417 VAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ GT ++APE L + DI+S G+++ ++ G+ P+
Sbjct: 201 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 7 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 62
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 63 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 111
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 112 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 163
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 164 SELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 212
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 213 CIMAELLTGRTLFPGTD 229
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 44/279 (15%)
Query: 226 KRDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKI---DQPPMAATELLN 282
KR + ++ + L SL +G GA GVV A + G+++AIKKI D+P A
Sbjct: 3 KRIVYNISSDFQLKSL--LGEGAYGVVCSATHKPT-GEIVAIKKIEPFDKPLFAL----- 54
Query: 283 VRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYE-FMKNGSLQDILHD 341
R +R+IK H N++ + ++ RPD E ++ +Q LH
Sbjct: 55 -------RTLREIK----ILKHFKHENIITI-FNIQRPDSFENFNEVYIIQELMQTDLHR 102
Query: 342 VSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGL 401
V + D +Y I + + + + + H +IHRD+KP+N+LI+ + ++ DFGL
Sbjct: 103 VISTQMLSDDHIQYFIYQTLRA----VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL 158
Query: 402 AKLM---------PDGHTRIRITTVAGTTGYVAPEYHQT-LTISEKSDIYSFGVLLAVLV 451
A+++ P G + VA T Y APE T S D++S G +LA L
Sbjct: 159 ARIIDESAADNSEPTGQQSGMVEFVA-TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
Query: 452 VGK--FPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDS 488
+ + FP D Y ++ ++ + S+N R I+S
Sbjct: 218 LRRPIFPGRD---YRHQLLLIFGIIGTPHSDNDLRCIES 253
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 7 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 62
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 63 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 111
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 112 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 163
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 164 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 212
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 213 CIMAELLTGRTLFPGTD 229
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 12 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 67
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 68 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 116
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 117 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 168
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 169 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 217
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 218 CIMAELLTGRTLFPGTD 234
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++GK+I +++ A ++L ++ ++ +E H L L+
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D V E+ G L +S+ R + AR+ A + S LEYLH +++
Sbjct: 76 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 128
Query: 379 RDIKPANVLIDDGMEARISDFGLAKL-MPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RDIK N+++D +I+DFGL K + DG T + T GT Y+APE +
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKTFCGTPEYLAPEVLEDNDYGRA 185
Query: 438 SDIYSFGVLLAVLVVGKFPF 457
D + GV++ ++ G+ PF
Sbjct: 186 VDWWGLGVVMYEMMCGRLPF 205
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 106/243 (43%), Gaps = 35/243 (14%)
Query: 218 ICARPIFKKRDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSY-GKMIAIKKIDQPPMA 276
+ A+ F + A KE L L+ IG G G V + G Y G +A+K I A
Sbjct: 177 VAAQDEFYRSGWALNMKE--LKLLQTIGKGEFGDV----MLGDYRGNKVAVKCIKNDATA 230
Query: 277 ATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSL 335
L ++ ++T R H NL+ L + L +V E+M GSL
Sbjct: 231 QAFL--------------AEASVMTQLR--HSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274
Query: 336 QDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEAR 395
D L S+GR L + + + +EYL + +HRD+ NVL+ + A+
Sbjct: 275 VDYLR--SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAK 329
Query: 396 ISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGK 454
+SDFGL K ++ + APE + S KSD++SFG+LL + G+
Sbjct: 330 VSDFGLTKEASSTQDTGKL-----PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 384
Query: 455 FPF 457
P+
Sbjct: 385 VPY 387
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 12 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 67
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 68 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 116
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 117 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 168
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 169 CELKILDFGLAR-----HTADEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 217
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 218 CIMAELLTGRTLFPGTD 234
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 12 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 67
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 68 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 116
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 117 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 168
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 169 CELKILDFGLAR-----HTADEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 217
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 218 CIMAELLTGRTLFPGTD 234
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 11 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 66
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 67 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 115
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 116 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 167
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 168 SELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 216
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 217 CIMAELLTGRTLFPGTD 233
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 11 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 66
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 67 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 115
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 116 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 167
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 168 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 216
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 217 CIMAELLTGRTLFPGTD 233
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 318 TRPDCHLLVYEFMKNGSLQDILHDVSQGRR--ELDWLARYRIARGMASGLEYLHMYHRPC 375
++ C + EF G+L+ + + RR +LD + + + G++Y+H
Sbjct: 104 SKTKCLFIQMEFCDKGTLEQWI----EKRRGEKLDKVLALELFEQITKGVDYIHSKK--- 156
Query: 376 IIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTIS 435
+IHRD+KP+N+ + D + +I DFGL + + R R GT Y++PE +
Sbjct: 157 LIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTR---SKGTLRYMSPEQISSQDYG 213
Query: 436 EKSDIYSFGVLLAVLV 451
++ D+Y+ G++LA L+
Sbjct: 214 KEVDLYALGLILAELL 229
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNAMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 20/203 (9%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI P +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRILQAVNFPFLVKLE 107
Query: 319 ---RPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRP 374
+ + +L +V E+M G D+ + + R + AR+ A+ + EYLH
Sbjct: 108 FSFKDNSNLYMVMEYMPGG---DMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD-- 161
Query: 375 CIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI 434
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 435 SEKSDIYSFGVLLAVLVVGKFPF 457
++ D ++ GVL+ + G PF
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 16 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 71
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 72 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 120
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 121 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 172
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 173 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 221
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 222 CIMAELLTGRTLFPGTD 238
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 111/240 (46%), Gaps = 50/240 (20%)
Query: 238 LASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
L L +G GA G V A + +A+KK+ +P L++ RR R++R +K
Sbjct: 22 LQGLRPVGSGAYGSVCSA-YDARLRQKVAVKKLSRP---FQSLIHARRTY--RELRLLK- 74
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELD 350
+ H N++ L V P + LV M L +I+ + +
Sbjct: 75 ------HLKHENVIGL-LDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSDEHVQ 126
Query: 351 WLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHT 410
+L Y++ RG L+Y+H IIHRD+KP+NV +++ E RI DFGLA+ +
Sbjct: 127 FLV-YQLLRG----LKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADE--- 175
Query: 411 RIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDFF 461
+T T Y APE Y+QT+ DI+S G ++A L+ GK FP D+
Sbjct: 176 --EMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVGCIMAELLQGKALFPGSDYI 227
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 129/279 (46%), Gaps = 44/279 (15%)
Query: 226 KRDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKI---DQPPMAATELLN 282
KR + ++ + L SL +G GA GVV A + G+++AIKKI D+P A
Sbjct: 3 KRIVYNISSDFQLKSL--LGEGAYGVVCSATHKPT-GEIVAIKKIEPFDKPLFAL----- 54
Query: 283 VRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYE-FMKNGSLQDILHD 341
R +R+IK H N++ + ++ RPD E ++ +Q LH
Sbjct: 55 -------RTLREIK----ILKHFKHENIITI-FNIQRPDSFENFNEVYIIQELMQTDLHR 102
Query: 342 VSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGL 401
V + D +Y I + + + + + H +IHRD+KP+N+LI+ + ++ DFGL
Sbjct: 103 VISTQMLSDDHIQYFIYQTLRA----VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL 158
Query: 402 AKLM---------PDGHTRIRITTVAGTTGYVAPEYHQT-LTISEKSDIYSFGVLLAVLV 451
A+++ P G +T T Y APE T S D++S G +LA L
Sbjct: 159 ARIIDESAADNSEPTGQQS-GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
Query: 452 VGK--FPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDS 488
+ + FP D Y ++ ++ + S+N R I+S
Sbjct: 218 LRRPIFPGRD---YRHQLLLIFGIIGTPHSDNDLRCIES 253
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 53 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 100
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + EYLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 159
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 160 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 211
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 1 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRP---FQ 56
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 57 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 105
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 106 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 157
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 158 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 206
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 207 CIMAELLTGRTLFPGTD 223
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 10 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 65
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 66 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 114
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 115 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 166
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 167 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 215
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 216 CIMAELLTGRTLFPGTD 232
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 4 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 59
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 60 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 108
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 109 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 160
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 161 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 209
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 210 CIMAELLTGRTLFPGTD 226
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 20/203 (9%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI P +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRILQAVNFPFLVKLE 107
Query: 319 ---RPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRP 374
+ + +L +V E+M G D+ + + R + AR+ A+ + EYLH
Sbjct: 108 FSFKDNSNLYMVMEYMPGG---DMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLHSLD-- 161
Query: 375 CIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI 434
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEIILSKGY 215
Query: 435 SEKSDIYSFGVLLAVLVVGKFPF 457
++ D ++ GVL+ + G PF
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 129/279 (46%), Gaps = 44/279 (15%)
Query: 226 KRDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKI---DQPPMAATELLN 282
KR + ++ + L SL +G GA GVV A + G+++AIKKI D+P A
Sbjct: 3 KRIVYNISSDFQLKSL--LGEGAYGVVCSATHKPT-GEIVAIKKIEPFDKPLFAL----- 54
Query: 283 VRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYE-FMKNGSLQDILHD 341
R +R+IK H N++ + ++ RPD E ++ +Q LH
Sbjct: 55 -------RTLREIK----ILKHFKHENIITI-FNIQRPDSFENFNEVYIIQELMQTDLHR 102
Query: 342 VSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGL 401
V + D +Y I + + + + + H +IHRD+KP+N+LI+ + ++ DFGL
Sbjct: 103 VISTQMLSDDHIQYFIYQTLRA----VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL 158
Query: 402 AKLM---------PDGHTRIRITTVAGTTGYVAPEYHQT-LTISEKSDIYSFGVLLAVLV 451
A+++ P G +T T Y APE T S D++S G +LA L
Sbjct: 159 ARIIDESAADNSEPTGQQS-GMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
Query: 452 VGK--FPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDS 488
+ + FP D Y ++ ++ + S+N R I+S
Sbjct: 218 LRRPIFPGRD---YRHQLLLIFGIIGTPHSDNDLRCIES 253
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 307 HRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGL 365
H NL+ L + L +V E+M GSL D L S+GR L + + + +
Sbjct: 64 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVCEAM 121
Query: 366 EYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVA 425
EYL + +HRD+ NVL+ + A++SDFGL K ++ + A
Sbjct: 122 EYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL-----PVKWTA 173
Query: 426 PEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
PE + S KSD++SFG+LL + G+ P+
Sbjct: 174 PEALREAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 11 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 66
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 67 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 115
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 116 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 167
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 168 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 216
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 217 CIMAELLTGRTLFPGTD 233
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 28 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 83
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 84 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 132
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 133 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 184
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 185 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 233
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 234 CIMAELLTGRTLFPGTD 250
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 122/258 (47%), Gaps = 52/258 (20%)
Query: 220 ARPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA 277
+RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 2 SRPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---F 57
Query: 278 TELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFM 330
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 58 QSIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--L 106
Query: 331 KNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDD 390
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 107 MGADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNE 158
Query: 391 GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSF 443
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S
Sbjct: 159 DCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSV 207
Query: 444 GVLLAVLVVGK--FPFDD 459
G ++A L+ G+ FP D
Sbjct: 208 GCIMAELLTGRTLFPGTD 225
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 28 NLKPIGSGAQGIVCAA-YDAVLDRNVAIKKLSRPFQNQTHAKRAYR------------EL 74
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L LV E M Q I + ELD
Sbjct: 75 VLMKXVNHKNIISL-LNVFTPQKTLEEFQDVYLVMELMDANLXQVI-------QMELDHE 126
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSF 180
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+T T Y APE + E DI+S G ++ +V K FP D+
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 25 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 80
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 81 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 129
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 130 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 181
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 182 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 230
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 231 CIMAELLTGRTLFPGTD 247
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 100
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ G R + AR+ A+ + EYLH
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLH 159
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N++ID +++DFG AK + R + GT Y+APE
Sbjct: 160 SLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 211
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 28 NLKPIGSGAQGIVCAA-YDAVLDRNVAIKKLSRPFQNQTHAKRAYR------------EL 74
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L LV E M Q I + ELD
Sbjct: 75 VLMKXVNHKNIISL-LNVFTPQKTLEEFQDVYLVMELMDANLCQVI-------QMELDHE 126
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSF 180
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+T T Y APE + E DI+S G ++ +V K FP D+
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 24 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 79
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 80 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 128
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 129 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 180
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 181 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 229
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 230 CIMAELLTGRTLFPGTD 246
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 10 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 65
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 66 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 114
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 115 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 166
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 167 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 215
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 216 CIMAELLTGRTLFPGTD 232
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILDFGLAR-----HTDDEMTGXVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 126/293 (43%), Gaps = 50/293 (17%)
Query: 235 EDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
E + L IG G+ G VY A +V S +++AIKK+ + N K +
Sbjct: 14 EKLFSDLREIGHGSFGAVYFARDVRNS--EVVAIKKMSYSGKQS-----------NEKWQ 60
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
I E+ ++ H N + + R LV E+ GS D+L + +E++ A
Sbjct: 61 DIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAA 119
Query: 354 RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIR 413
+ G GL YLH ++ +IHRD+K N+L+ + ++ DFG A +M + +
Sbjct: 120 ---VTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV- 172
Query: 414 ITTVAGTTGYVAPEYHQTLTISE-----KSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMN 468
GT ++APE L + E K D++S G+ L K P + MN
Sbjct: 173 -----GTPYWMAPEV--ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN-------MN 218
Query: 469 MVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSK 521
+ + ++ +E+P L + E R C P++RP+S+
Sbjct: 219 AMSALYHIAQNESP------ALQSGHWSEYFR---NFVDSCLQKIPQDRPTSE 262
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 45 GSFGRVMLVKHKETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 92
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V G R + AR+ A+ + EYLH
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLH 151
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 152 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 203
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 204 LSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 20/164 (12%)
Query: 307 HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLE 366
HRN+L L D LV+E M+ GS+ +H RR + L + + +AS L+
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHK----RRHFNELEASVVVQDVASALD 125
Query: 367 YLHMYHRPCIIHRDIKPANVLIDDGME---ARISDFGLA---KLMPDGH--TRIRITTVA 418
+L H I HRD+KP N+L + + +I DF L KL D + + T
Sbjct: 126 FL---HNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC 182
Query: 419 GTTGYVAPE----YHQTLTISEK-SDIYSFGVLLAVLVVGKFPF 457
G+ Y+APE + + +I +K D++S GV+L +L+ G PF
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 14/187 (7%)
Query: 277 ATELLNVRRVLINRKMR-QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL 335
+ EL+ V+ + K+ +K EII + H N++ + + P +V E+ G L
Sbjct: 43 SNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 336 QDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEAR 395
+ + + GR D AR+ + + SG+ Y H + HRD+K N L+D R
Sbjct: 103 FERI--CNAGRFSEDE-ARFFFQQ-LISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPR 155
Query: 396 --ISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK-SDIYSFGVLLAVLVV 452
I DFG +K + + GT Y+APE K +D++S GV L V++V
Sbjct: 156 LKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
Query: 453 GKFPFDD 459
G +PF+D
Sbjct: 213 GAYPFED 219
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 132/308 (42%), Gaps = 54/308 (17%)
Query: 224 FKKRDIAFLTKEDS----LASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAAT 278
K D+A L +D + L IG G+ G VY A +V S +++AIKK+ +
Sbjct: 38 LKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNS--EVVAIKKMSYSGKQS- 94
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDI 338
N K + I E+ ++ H N + + R LV E+ GS D+
Sbjct: 95 ----------NEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDL 143
Query: 339 LHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISD 398
L + +E++ A + G GL YLH ++ +IHRD+K N+L+ + ++ D
Sbjct: 144 LEVHKKPLQEVEIAA---VTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGD 197
Query: 399 FGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE-----KSDIYSFGVLLAVLVVG 453
FG A +M + + GT ++APE L + E K D++S G+ L
Sbjct: 198 FGSASIMAPANXFV------GTPYWMAPEV--ILAMDEGQYDGKVDVWSLGITCIELAER 249
Query: 454 KFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDD 513
K P + MN + + ++ +E+P L + E R C
Sbjct: 250 KPPLFN-------MNAMSALYHIAQNESP------ALQSGHWSEYFR---NFVDSCLQKI 293
Query: 514 PEERPSSK 521
P++RP+S+
Sbjct: 294 PQDRPTSE 301
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 33/223 (14%)
Query: 238 LASLEIIGVGACGVVYKAEVPGSY-GKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIK 296
L L+ IG G G V + G Y G +A+K I A L +
Sbjct: 8 LKLLQTIGKGEFGDV----MLGDYRGNKVAVKCIKNDATAQAFL--------------AE 49
Query: 297 SEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
+ ++T R H NL+ L + L +V E+M GSL D L S+GR L
Sbjct: 50 ASVMTQLR--HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLL 105
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ + + +EYL + +HRD+ NVL+ + A++SDFGL K ++
Sbjct: 106 KFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL- 161
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ APE + S KSD++SFG+LL + G+ P+
Sbjct: 162 ----PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 24/222 (10%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G GACG V K K +AIK I + A L +++EI
Sbjct: 18 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPAL------NVETEIEILK 70
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
++ H ++ ++ D + +V E M+ G L D + + + L Y+ M
Sbjct: 71 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ----MLL 125
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGME---ARISDFGLAKLMPDGHTRIRITTVAGT 420
++YLH IIHRD+KP NVL+ E +I+DFG +K++ G T + + T+ GT
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL-MRTLCGT 179
Query: 421 TGYVAPEYH---QTLTISEKSDIYSFGVLLAVLVVGKFPFDD 459
Y+APE T + D +S GV+L + + G PF +
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 24/222 (10%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G GACG V K K +AIK I + A L +++EI
Sbjct: 17 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPAL------NVETEIEILK 69
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
++ H ++ ++ D + +V E M+ G L D + + + L Y+ M
Sbjct: 70 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ----MLL 124
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGME---ARISDFGLAKLMPDGHTRIRITTVAGT 420
++YLH IIHRD+KP NVL+ E +I+DFG +K++ G T + + T+ GT
Sbjct: 125 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL-MRTLCGT 178
Query: 421 TGYVAPEYH---QTLTISEKSDIYSFGVLLAVLVVGKFPFDD 459
Y+APE T + D +S GV+L + + G PF +
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 220
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 24/222 (10%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G GACG V K K +AIK I + A L +++EI
Sbjct: 18 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPAL------NVETEIEILK 70
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
++ H ++ ++ D + +V E M+ G L D + + + L Y+ M
Sbjct: 71 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ----MLL 125
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGME---ARISDFGLAKLMPDGHTRIRITTVAGT 420
++YLH IIHRD+KP NVL+ E +I+DFG +K++ G T + + T+ GT
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL-MRTLCGT 179
Query: 421 TGYVAPEYH---QTLTISEKSDIYSFGVLLAVLVVGKFPFDD 459
Y+APE T + D +S GV+L + + G PF +
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 24/222 (10%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G GACG V K K +AIK I + A L +++EI
Sbjct: 18 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPAL------NVETEIEILK 70
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
++ H ++ ++ D + +V E M+ G L D + + + L Y+ M
Sbjct: 71 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ----MLL 125
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGME---ARISDFGLAKLMPDGHTRIRITTVAGT 420
++YLH IIHRD+KP NVL+ E +I+DFG +K++ G T + + T+ GT
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL-MRTLCGT 179
Query: 421 TGYVAPEYH---QTLTISEKSDIYSFGVLLAVLVVGKFPFDD 459
Y+APE T + D +S GV+L + + G PF +
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 28 NLKPIGSGAQGIVCAA-YDAVLDRNVAIKKLSRPFQNQTHAKRAYR------------EL 74
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L LV E M Q I + ELD
Sbjct: 75 VLMKXVNHKNIISL-LNVFTPQKTLEEFQDVYLVMELMDANLXQVI-------QMELDHE 126
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 127 RMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSF 180
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+T T Y APE + E DI+S G ++ +V K FP D+
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 2 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 57
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 58 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 106
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 107 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 158
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 159 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 207
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 208 CIMAELLTGRTLFPGTD 224
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 2 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 57
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 58 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 106
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 107 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 158
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 159 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 207
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 208 CIMAELLTGRTLFPGTD 224
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 103/225 (45%), Gaps = 36/225 (16%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
L+ +G GA G V A V G G +AIKK+ +P +EL R R++R +K
Sbjct: 30 LQPVGSGAYGAVCSA-VDGRTGAKVAIKKLYRP--FQSELFAKRAY---RELRLLK---- 79
Query: 301 TAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWLA 353
+ H N++ L V PD L LV FM L ++ G + +L
Sbjct: 80 ---HMRHENVIGL-LDVFTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEKLGEDRIQFLV 134
Query: 354 RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIR 413
Y+ M GL Y+H IIHRD+KP N+ +++ E +I DFGLA+
Sbjct: 135 -YQ----MLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSE 181
Query: 414 ITTVAGTTGYVAPEY-HQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ T Y APE + ++ DI+S G ++A ++ GK F
Sbjct: 182 MXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLF 226
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKSQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGL + HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 SELKILDFGLCR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + N +Q V
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVV---KLKQIEHTL---------NEKRIQQAVN 100
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L +L G R + AR+ A+ + EYLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 159
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 160 SLD---LIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGTPEYLAPEII 211
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 1 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 56
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 57 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 105
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 106 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 157
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 158 CELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 206
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 207 CIMAELLTGRTLFPGTD 223
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 49/228 (21%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G GA G V A + G+ +AIKK+ +P + + R R E++
Sbjct: 50 VGSGAYGSVCSA-IDKRSGEKVAIKKLSRPFQS--------EIFAKRAYR----ELLLLK 96
Query: 304 RIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWLARYR 356
+ H N++ L V P L LV FM+ LQ I+ G + +Y
Sbjct: 97 HMQHENVIGL-LDVFTPASSLRNFYDFYLVMPFMQT-DLQKIM-----GMEFSEEKIQYL 149
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITT 416
+ + M GL+Y+H ++HRD+KP N+ +++ E +I DFGLA+ H +T
Sbjct: 150 VYQ-MLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTG 200
Query: 417 VAGTTGYVAPE-------YHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T Y APE Y+QT+ DI+S G ++A ++ GK F
Sbjct: 201 YVVTRWYRAPEVILSWMHYNQTV------DIWSVGCIMAEMLTGKTLF 242
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 24/222 (10%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G GACG V K K +AIK I + A L +++EI
Sbjct: 24 LGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPAL------NVETEIEILK 76
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
++ H ++ ++ D + +V E M+ G L D + + + L Y+ M
Sbjct: 77 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ----MLL 131
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGME---ARISDFGLAKLMPDGHTRIRITTVAGT 420
++YLH IIHRD+KP NVL+ E +I+DFG +K++ G T + + T+ GT
Sbjct: 132 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL-MRTLCGT 185
Query: 421 TGYVAPEYH---QTLTISEKSDIYSFGVLLAVLVVGKFPFDD 459
Y+APE T + D +S GV+L + + G PF +
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 227
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 100
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ G R + AR+ A+ + EYLH
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 159
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N++ID +++DFG AK + R + GT Y+APE
Sbjct: 160 SLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 211
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 100
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ G R + AR+ A+ + EYLH
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 159
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N++ID +++DFG AK + R + GT Y+APE
Sbjct: 160 SLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 211
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 103/223 (46%), Gaps = 29/223 (13%)
Query: 238 LASLEIIGVGACGVVYKAEVPGSYGKMIAIKKI-------DQPPMAATELLNVRRVLINR 290
+E+IG G G V+KA+ GK IK++ ++ A +L +V V N
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRID-GKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNG 71
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRR--E 348
+ T+ + R ++ C + EF G+L+ + + RR +
Sbjct: 72 CWDGFDYDPETSSKNSSR---------SKTKCLFIQMEFCDKGTLEQWI----EKRRGEK 118
Query: 349 LDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDG 408
LD + + + G++Y+H +I+RD+KP+N+ + D + +I DFGL + +
Sbjct: 119 LDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 175
Query: 409 HTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLV 451
R R GT Y++PE + ++ D+Y+ G++LA L+
Sbjct: 176 GKRXR---SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 100
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V G R + AR+ A+ + EYLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 159
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 160 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 211
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT + T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 235 EDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQ 294
ED E+IG GA VV + + G+ A+K +D ++ L+
Sbjct: 23 EDVYELCEVIGKGAFSVVRRC-INRETGQQFAVKIVDVAKFTSSPGLSTE---------D 72
Query: 295 IKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQ-DILHDVSQGRRELDWLA 353
+K E + H +++ L + +V+EFM L +I+ G + +A
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 354 RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFGLAKLMPDGHT 410
+ M LE L H IIHRD+KP NVL+ ++ ++ DFG+A + G +
Sbjct: 133 SHY----MRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GES 186
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ GT ++APE + + D++ GV+L +L+ G PF
Sbjct: 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT + T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 26/218 (11%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E +G GA GVV++ + G A K + P + E ++ EI T
Sbjct: 57 EELGTGAFGVVHRV-TERATGNNFAAKFVMTPHESDKET--------------VRKEIQT 101
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+ H L+ L + +++YEFM G L + + D E D Y R +
Sbjct: 102 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE-DEAVEY--MRQV 158
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLIDD--GMEARISDFGLAKLMPDGHTRIRITTVAG 419
GL HM H +H D+KP N++ E ++ DFGL + D +++TT G
Sbjct: 159 CKGL--CHM-HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKVTT--G 212
Query: 420 TTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T + APE + + +D++S GVL +L+ G PF
Sbjct: 213 TAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 73 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 120
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + + EYLH
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT-FEYLH 179
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + T+ GT Y+APE
Sbjct: 180 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLAPEII 231
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 232 LSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 100
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V G R + AR+ A+ + EYLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 159
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 160 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 211
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N++ID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 45 GSFGRVMLVKHKETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 92
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V G R + AR+ A+ + EYLH
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 151
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 152 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 203
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 204 LSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 100
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V G R + AR+ A+ + EYLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 159
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 160 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 211
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 66 NLKPIGSGAQGIVCAA-YDAVLDRNVAIKKLSRPFQNQTHAKRAYR------------EL 112
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L LV E M Q I + ELD
Sbjct: 113 VLMKCVNHKNIISL-LNVFTPQKTLEEFQDVYLVMELMDANLCQVI-------QMELDHE 164
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 165 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSF 218
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+T T Y APE + E DI+S G ++ +V K FP D+
Sbjct: 219 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 268
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 24/222 (10%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G GACG V K K +AI+ I + A L +++EI
Sbjct: 157 LGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPAL------NVETEIEILK 209
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
++ H ++ ++ D + +V E M+ G L D + + + L Y+ M
Sbjct: 210 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ----MLL 264
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGME---ARISDFGLAKLMPDGHTRIRITTVAGT 420
++YLH IIHRD+KP NVL+ E +I+DFG +K++ G T + + T+ GT
Sbjct: 265 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL-MRTLCGT 318
Query: 421 TGYVAPEYH---QTLTISEKSDIYSFGVLLAVLVVGKFPFDD 459
Y+APE T + D +S GV+L + + G PF +
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 360
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 121/257 (47%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I D+GLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILDYGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 73 GSFGRVMLVKHKETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 120
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V G R + AR+ A+ + EYLH
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 179
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+APE
Sbjct: 180 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 231
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 232 LSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 135/306 (44%), Gaps = 56/306 (18%)
Query: 244 IGVGACGVVYKAE----VPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+G GA G V+ AE +P ++A+K + + +A R+ Q ++E+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA------------RQDFQREAEL 96
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL-------------HDVSQGR 346
+T + H++++ T L+V+E+M++G L L DV+ G
Sbjct: 97 LTM--LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 154
Query: 347 RELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK-LM 405
L L +A +A+G+ YL H +HRD+ N L+ G+ +I DFG+++ +
Sbjct: 155 LGLGQL--LAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 209
Query: 406 PDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDFFQYT 464
+ R+ T+ ++ PE + +SD++SFGV+L + GK P+ T
Sbjct: 210 STDYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ-LSNT 267
Query: 465 EEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVR 524
E ++ + R + E P RA + V I C +P++R S KDV
Sbjct: 268 EAIDCITQGREL---ERP-RACPPE------------VYAIMRGCWQREPQQRHSIKDVH 311
Query: 525 CMLSQI 530
L +
Sbjct: 312 ARLQAL 317
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 24/222 (10%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G GACG V K K +AI+ I + A L +++EI
Sbjct: 143 LGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPAL------NVETEIEILK 195
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
++ H ++ ++ D + +V E M+ G L D + + + L Y+ M
Sbjct: 196 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ----MLL 250
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGME---ARISDFGLAKLMPDGHTRIRITTVAGT 420
++YLH IIHRD+KP NVL+ E +I+DFG +K++ G T + + T+ GT
Sbjct: 251 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSL-MRTLCGT 304
Query: 421 TGYVAPEYH---QTLTISEKSDIYSFGVLLAVLVVGKFPFDD 459
Y+APE T + D +S GV+L + + G PF +
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N++ID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 ISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 66 NLKPIGSGAQGIVCAA-YDAVLDRNVAIKKLSRPFQNQTHAKRAYR------------EL 112
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L LV E M Q I + ELD
Sbjct: 113 VLMKCVNHKNIISL-LNVFTPQKTLEEFQDVYLVMELMDANLCQVI-------QMELDHE 164
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 165 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSF 218
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+T T Y APE + E DI+S G ++ +V K FP D+
Sbjct: 219 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 268
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 111/253 (43%), Gaps = 45/253 (17%)
Query: 233 TKEDSLASLEIIGVGACGVVYKAE-VPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR- 290
K D L + +G GA GVV K VP G+++A+K+I A +R+L++
Sbjct: 4 VKADDLEPIMELGRGAYGVVEKMRHVPS--GQIMAVKRI----RATVNSQEQKRLLMDLD 57
Query: 291 -KMRQIKSEIITA--------GRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHD 341
MR + G +W + E M + SL
Sbjct: 58 ISMRTVDCPFTVTFYGALFREGDVW------------------ICMELM-DTSLDKFYKQ 98
Query: 342 VSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGL 401
V + + +IA + LE+LH + +IHRD+KP+NVLI+ + ++ DFG+
Sbjct: 99 VIDKGQTIPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGI 156
Query: 402 AKLMPDGHTRIRITTVAGTTGYVAPE-YHQTLT---ISEKSDIYSFGVLLAVLVVGKFPF 457
+ + D + AG Y+APE + L S KSDI+S G+ + L + +FP+
Sbjct: 157 SGYLVDDVAK---DIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY 213
Query: 458 DDFFQYTEEMNMV 470
D + +++ V
Sbjct: 214 DSWGTPFQQLKQV 226
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++GK+I +++ A ++L ++ ++ +E H L L+
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D V E+ G L H +S+ R + AR+ A + S LEYLH +++
Sbjct: 76 THDRLCFVMEYANGGEL--FFH-LSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 128
Query: 379 RDIKPANVLIDDGMEARISDFGLAKL-MPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RDIK N+++D +I+DFGL K + DG T + GT Y+APE +
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 438 SDIYSFGVLLAVLVVGKFPF 457
D + GV++ ++ G+ PF
Sbjct: 186 VDWWGLGVVMYEMMCGRLPF 205
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 28 NLKPIGSGAQGIVCAA-YDAVLDRNVAIKKLSRPFQNQTHAKRAYR------------EL 74
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L LV E M Q I + ELD
Sbjct: 75 VLMKCVNHKNIISL-LNVFTPQKTLEEFQDVYLVMELMDANLCQVI-------QMELDHE 126
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 180
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+T T Y APE + E DI+S G ++ +V K FP D+
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N++ID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 28 NLKPIGSGAQGIVCAA-YDAVLDRNVAIKKLSRPFQNQTHAKRAYR------------EL 74
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L LV E M Q I + ELD
Sbjct: 75 VLMKCVNHKNIISL-LNVFTPQKTLEEFQDVYLVMELMDANLXQVI-------QMELDHE 126
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 127 RMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSF 180
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+T T Y APE + E DI+S G ++ +V K FP D+
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 28/238 (11%)
Query: 224 FKKRDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNV 283
F++ D+ ED E +G G +V K G+ GK A K I + ++++
Sbjct: 5 FRQEDV-----EDHYEMGEELGSGQFAIVRKCRQKGT-GKEYAAKFIKKRRLSSS----- 53
Query: 284 RRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVS 343
R ++R+ +I+ E+ I H N++ L +L+ E + G L D L
Sbjct: 54 -RRGVSRE--EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL---- 106
Query: 344 QGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDD----GMEARISDF 399
E + L + + L+ +H H I H D+KP N+++ D ++ DF
Sbjct: 107 ---AEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDF 163
Query: 400 GLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
G+A + G+ + GT +VAPE + ++D++S GV+ +L+ G PF
Sbjct: 164 GIAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 16/144 (11%)
Query: 320 PDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHR 379
P C LV+EFM++G L D L +G + L + + G+ YL +IHR
Sbjct: 76 PIC--LVFEFMEHGCLSDYLR-TQRGLFAAETL--LGMCLDVCEGMAYLE---EASVIHR 127
Query: 380 DIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT---TGYVAPEYHQTLTISE 436
D+ N L+ + ++SDFG+ + + D + T+ GT + +PE S
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDD----QYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 437 KSDIYSFGVLL-AVLVVGKFPFDD 459
KSD++SFGVL+ V GK P+++
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYEN 207
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++GK+I +++ A ++L ++ ++ +E H L L+
Sbjct: 21 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 80
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D V E+ G L H +S+ R + AR+ A + S LEYLH +++
Sbjct: 81 THDRLCFVMEYANGGEL--FFH-LSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 133
Query: 379 RDIKPANVLIDDGMEARISDFGLAKL-MPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RDIK N+++D +I+DFGL K + DG T + GT Y+APE +
Sbjct: 134 RDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKXFCGTPEYLAPEVLEDNDYGRA 190
Query: 438 SDIYSFGVLLAVLVVGKFPF 457
D + GV++ ++ G+ PF
Sbjct: 191 VDWWGLGVVMYEMMCGRLPF 210
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 29 NLKPIGSGAQGIVCAA-YDAVLDRNVAIKKLSRPFQNQTHAKRAYR------------EL 75
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L LV E M Q I + ELD
Sbjct: 76 VLMKCVNHKNIISL-LNVFTPQKTLEEFQDVYLVMELMDANLCQVI-------QMELDHE 127
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 128 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 181
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+T T Y APE + E DI+S G ++ +V K FP D+
Sbjct: 182 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 231
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 135/306 (44%), Gaps = 56/306 (18%)
Query: 244 IGVGACGVVYKAE----VPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+G GA G V+ AE +P ++A+K + + +A R+ Q ++E+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA------------RQDFQREAEL 67
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILH-------------DVSQGR 346
+T + H++++ T L+V+E+M++G L L DV+ G
Sbjct: 68 LTM--LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 125
Query: 347 RELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK-LM 405
L L +A +A+G+ YL H +HRD+ N L+ G+ +I DFG+++ +
Sbjct: 126 LGLGQL--LAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 180
Query: 406 PDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDFFQYT 464
+ R+ T+ ++ PE + +SD++SFGV+L + GK P+ T
Sbjct: 181 STDYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ-LSNT 238
Query: 465 EEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVR 524
E ++ + R + E P RA + V I C +P++R S KDV
Sbjct: 239 EAIDCITQGREL---ERP-RACPPE------------VYAIMRGCWQREPQQRHSIKDVH 282
Query: 525 CMLSQI 530
L +
Sbjct: 283 ARLQAL 288
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 28 NLKPIGSGAQGIVCAA-YDAVLDRNVAIKKLSRPFQNQTHAKRAYR------------EL 74
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L LV E M Q I + ELD
Sbjct: 75 VLMKCVNHKNIISL-LNVFTPQKTLEEFQDVYLVMELMDANLCQVI-------QMELDHE 126
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 180
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+T T Y APE + E DI+S G ++ +V K FP D+
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 29 NLKPIGSGAQGIVCAA-YDAVLDRNVAIKKLSRPFQNQTHAKRAYR------------EL 75
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L LV E M Q I + ELD
Sbjct: 76 VLMKCVNHKNIISL-LNVFTPQKTLEEFQDVYLVMELMDANLCQVI-------QMELDHE 127
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 128 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 181
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+T T Y APE + E DI+S G ++ +V K FP D+
Sbjct: 182 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 231
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 25 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRP---FQ 80
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 81 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 129
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 130 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 181
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT + T Y APE Y+QT+ DI+S G
Sbjct: 182 CELKILDFGLAR-----HTDDEMXGXVATRWYRAPEIMLNWMHYNQTV------DIWSVG 230
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 231 CIMAELLTGRTLFPGTD 247
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 27 NLKPIGSGAQGIVCAA-YDAVLDRNVAIKKLSRPFQNQTHAKRAYR------------EL 73
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L LV E M Q I + ELD
Sbjct: 74 VLMKCVNHKNIISL-LNVFTPQKTLEEFQDVYLVMELMDANLCQVI-------QMELDHE 125
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 126 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 179
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+T T Y APE + E DI+S G ++ +V K FP D+
Sbjct: 180 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 229
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 26/218 (11%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E +G GA GVV++ + G A K + P + E ++ EI T
Sbjct: 163 EELGTGAFGVVHRV-TERATGNNFAAKFVMTPHESDKET--------------VRKEIQT 207
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+ H L+ L + +++YEFM G L + + D E D Y R +
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSE-DEAVEY--MRQV 264
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLIDD--GMEARISDFGLAKLMPDGHTRIRITTVAG 419
GL HM H +H D+KP N++ E ++ DFGL + D +++TT G
Sbjct: 265 CKGL--CHM-HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL-DPKQSVKVTT--G 318
Query: 420 TTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T + APE + + +D++S GVL +L+ G PF
Sbjct: 319 TAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 28 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 83
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 84 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 132
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 133 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 184
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT + T Y APE Y+QT+ DI+S G
Sbjct: 185 CELKILDFGLAR-----HTDDEMXGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 233
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 234 CIMAELLTGRTLFPGTD 250
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 135/306 (44%), Gaps = 56/306 (18%)
Query: 244 IGVGACGVVYKAE----VPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+G GA G V+ AE +P ++A+K + + +A R+ Q ++E+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA------------RQDFQREAEL 73
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILH-------------DVSQGR 346
+T + H++++ T L+V+E+M++G L L DV+ G
Sbjct: 74 LTM--LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 131
Query: 347 RELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK-LM 405
L L +A +A+G+ YL H +HRD+ N L+ G+ +I DFG+++ +
Sbjct: 132 LGLGQL--LAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIY 186
Query: 406 PDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDFFQYT 464
+ R+ T+ ++ PE + +SD++SFGV+L + GK P+ T
Sbjct: 187 STDYYRVGGRTMLPIR-WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ-LSNT 244
Query: 465 EEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVR 524
E ++ + R + E P RA + V I C +P++R S KDV
Sbjct: 245 EAIDCITQGREL---ERP-RACPPE------------VYAIMRGCWQREPQQRHSIKDVH 288
Query: 525 CMLSQI 530
L +
Sbjct: 289 ARLQAL 294
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K+++I+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKEIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N++ID +++DFGLAK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
LV E++ +G L+D L + R LD + + G+EYL R C+ HRD+
Sbjct: 87 LVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLG--SRRCV-HRDLAAR 140
Query: 385 NVLIDDGMEARISDFGLAKLMP-DGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSF 443
N+L++ +I+DFGLAKL+P D + + APE S +SD++SF
Sbjct: 141 NILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 200
Query: 444 GVLL 447
GV+L
Sbjct: 201 GVVL 204
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 21 NLKPIGSGAQGIVCAA-YDAVLDRNVAIKKLSRPFQNQTHAKRAYR------------EL 67
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L LV E M Q I + ELD
Sbjct: 68 VLMKCVNHKNIISL-LNVFTPQKTLEEFQDVYLVMELMDANLXQVI-------QMELDHE 119
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 120 RMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSF 173
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+T T Y APE + E DI+S G ++ +V K FP D+
Sbjct: 174 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 223
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 21 NLKPIGSGAQGIVCAA-YDAVLDRNVAIKKLSRPFQNQTHAKRAYR------------EL 67
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L LV E M Q I + ELD
Sbjct: 68 VLMKCVNHKNIISL-LNVFTPQKTLEEFQDVYLVMELMDANLCQVI-------QMELDHE 119
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 120 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 173
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+T T Y APE + E DI+S G ++ +V K FP D+
Sbjct: 174 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 223
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 1 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRP---FQ 56
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 57 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 105
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 106 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 157
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DFGLA+ HT + T Y APE Y+QT+ DI+S G
Sbjct: 158 CELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLNWMHYNQTV------DIWSVG 206
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 207 CIMAELLTGRTLFPGTD 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 22 NLKPIGSGAQGIVCAA-YDAVLDRNVAIKKLSRPFQNQTHAKRAYR------------EL 68
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L LV E M Q I + ELD
Sbjct: 69 VLMKCVNHKNIISL-LNVFTPQKTLEEFQDVYLVMELMDANLCQVI-------QMELDHE 120
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 121 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 174
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+T T Y APE + E DI+S G ++ +V K FP D+
Sbjct: 175 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 224
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 22 NLKPIGSGAQGIVCAA-YDAVLDRNVAIKKLSRPFQNQTHAKRAYR------------EL 68
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L LV E M Q I + ELD
Sbjct: 69 VLMKCVNHKNIISL-LNVFTPQKTLEEFQDVYLVMELMDANLCQVI-------QMELDHE 120
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 121 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 174
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+T T Y APE + E DI+S G ++ +V K FP D+
Sbjct: 175 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 224
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N++ID +++DFG AK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++GK+I +++ A ++L ++ ++ +E H L L+
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D V E+ G L +S+ R + AR+ A + S LEYLH +++
Sbjct: 76 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 128
Query: 379 RDIKPANVLIDDGMEARISDFGLAKL-MPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RDIK N+++D +I+DFGL K + DG T + GT Y+APE +
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 438 SDIYSFGVLLAVLVVGKFPF 457
D + GV++ ++ G+ PF
Sbjct: 186 VDWWGLGVVMYEMMCGRLPF 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++GK+I +++ A ++L ++ ++ +E H L L+
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D V E+ G L +S+ R + AR+ A + S LEYLH +++
Sbjct: 76 THDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAE-IVSALEYLHSRD---VVY 128
Query: 379 RDIKPANVLIDDGMEARISDFGLAKL-MPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RDIK N+++D +I+DFGL K + DG T + GT Y+APE +
Sbjct: 129 RDIKLENLMLDKDGHIKITDFGLCKEGISDGAT---MKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 438 SDIYSFGVLLAVLVVGKFPF 457
D + GV++ ++ G+ PF
Sbjct: 186 VDWWGLGVVMYEMMCGRLPF 205
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 103/229 (44%), Gaps = 36/229 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R L+ K+
Sbjct: 28 NLKPIGSGAQGIVVAA-YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKV------- 79
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ H+N++ L +V P L +V E M + +L ++ + ELD
Sbjct: 80 -----VNHKNIIGL-LNVFTPQKSLEEFQDVYIVMELM-DANLSQVI------QMELDHE 126
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 127 RMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSF 180
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDD 459
+T T Y APE + E DI+S GV++ ++ G FP D
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTD 229
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 10/200 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++GK+I +K+ A ++L ++ ++ +E H L L+
Sbjct: 162 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 221
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D V E+ G L +S+ R + AR+ A + S L+YLH +++
Sbjct: 222 THDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAE-IVSALDYLH--SEKNVVY 275
Query: 379 RDIKPANVLIDDGMEARISDFGLAKL-MPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RD+K N+++D +I+DFGL K + DG T + T GT Y+APE +
Sbjct: 276 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKTFCGTPEYLAPEVLEDNDYGRA 332
Query: 438 SDIYSFGVLLAVLVVGKFPF 457
D + GV++ ++ G+ PF
Sbjct: 333 VDWWGLGVVMYEMMCGRLPF 352
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 116/250 (46%), Gaps = 34/250 (13%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKI-----DQPPMAATELLNVRRVLINRKMRQ 294
LE IG G GVVYKA+ +YG+ A+KKI D+ + T +R + I ++++
Sbjct: 6 GLEKIGEGTYGVVYKAQ--NNYGETFALKKIRLEKEDEGIPSTT----IREISILKELK- 58
Query: 295 IKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLAR 354
H N++ L + +LV+E + + L+ +L DV +G L+ +
Sbjct: 59 ------------HSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGG--LESVTA 102
Query: 355 YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRI 414
+ +G+ Y H ++HRD+KP N+LI+ E +I+DFGLA+ G +
Sbjct: 103 KSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKY 157
Query: 415 TTVAGTTGYVAPE-YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWM 473
T T Y AP+ + S DI+S G + A +V G F + + M + R +
Sbjct: 158 THEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL 217
Query: 474 RNVISSENPH 483
S P+
Sbjct: 218 GTPNSKNWPN 227
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRK---MRQIKSEIITAGRIWHRNLLPLQA 315
G++G++ +K + + A ++LN +L + R+ + ++ W L
Sbjct: 101 GAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL----H 156
Query: 316 HVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRP 374
+ + + HL LV ++ G L +L E +AR+ I M ++ +H H
Sbjct: 157 YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED--MARFYIGE-MVLAIDSIHQLH-- 211
Query: 375 CIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTL-- 432
+HRDIKP NVL+D R++DFG M D T ++ + GT Y++PE Q +
Sbjct: 212 -YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSVAVGTPDYISPEILQAMED 269
Query: 433 ---TISEKSDIYSFGVLLAVLVVGKFPF 457
+ D +S GV + ++ G+ PF
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 116/250 (46%), Gaps = 34/250 (13%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKI-----DQPPMAATELLNVRRVLINRKMRQ 294
LE IG G GVVYKA+ +YG+ A+KKI D+ + T +R + I ++++
Sbjct: 6 GLEKIGEGTYGVVYKAQ--NNYGETFALKKIRLEKEDEGIPSTT----IREISILKELK- 58
Query: 295 IKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLAR 354
H N++ L + +LV+E + + L+ +L DV +G L+ +
Sbjct: 59 ------------HSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGG--LESVTA 102
Query: 355 YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRI 414
+ +G+ Y H ++HRD+KP N+LI+ E +I+DFGLA+ G +
Sbjct: 103 KSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKY 157
Query: 415 TTVAGTTGYVAPE-YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWM 473
T T Y AP+ + S DI+S G + A +V G F + + M + R +
Sbjct: 158 THEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRIL 217
Query: 474 RNVISSENPH 483
S P+
Sbjct: 218 GTPNSKNWPN 227
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 13/169 (7%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
++ EII + H N++ + + P ++ E+ G L + + + GR D A
Sbjct: 62 NVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI--CNAGRFSEDE-A 118
Query: 354 RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEAR--ISDFGLAKLMPDGHTR 411
R+ + + SG+ Y H I HRD+K N L+D R I DFG +K
Sbjct: 119 RF-FFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLH 171
Query: 412 IRITTVAGTTGYVAPEYHQTLTISEK-SDIYSFGVLLAVLVVGKFPFDD 459
+ + GT Y+APE K +D++S GV L V++VG +PF+D
Sbjct: 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED 220
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRK---MRQIKSEIITAGRIWHRNLLPLQA 315
G++G++ +K + + A ++LN +L + R+ + ++ W L
Sbjct: 85 GAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL----H 140
Query: 316 HVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRP 374
+ + + HL LV ++ G L +L E +AR+ I M ++ +H H
Sbjct: 141 YAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED--MARFYIGE-MVLAIDSIHQLH-- 195
Query: 375 CIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTL-- 432
+HRDIKP NVL+D R++DFG M D T ++ + GT Y++PE Q +
Sbjct: 196 -YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT-VQSSVAVGTPDYISPEILQAMED 253
Query: 433 ---TISEKSDIYSFGVLLAVLVVGKFPF 457
+ D +S GV + ++ G+ PF
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 251 VVYKAEVPGSYGKMI--AIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIW-H 307
+++K GS+GK+ KK +Q A + L VL++ + E W H
Sbjct: 20 ILHKMLGKGSFGKVFLAEFKKTNQ--FFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 77
Query: 308 RNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEY 367
L + + V E++ G L + H S + +L Y A + GL++
Sbjct: 78 PFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFY--AAEIILGLQF 133
Query: 368 LHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK--LMPDGHTRIRITTVAGTTGYVA 425
LH I++RD+K N+L+D +I+DFG+ K ++ D T GT Y+A
Sbjct: 134 LH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT----NXFCGTPDYIA 186
Query: 426 PEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
PE + D +SFGVLL +++G+ PF
Sbjct: 187 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 369 HMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEY 428
H+ IIHRDIKP+N+L+D ++ DFG++ + D + R AG Y+APE
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTR---DAGCRPYMAPER 196
Query: 429 HQTLTISE----KSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHR 484
+ +SD++S G+ L L G+FP+ + +++ V+ + P
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLT------QVVKGDPPQ- 249
Query: 485 AIDSKLLGNGYEEQMRL-VLKIAYFCTSDDPEERPSSKDV 523
L N E + + C + D +RP K++
Sbjct: 250 ------LSNSEEREFSPSFINFVNLCLTKDESKRPKYKEL 283
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 108/229 (47%), Gaps = 27/229 (11%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
+ L +L +G G CG V+K + G +IA+K++ + + + N +R+L++
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKT-GHVIAVKQMRR---SGNKEEN-KRILMDL----- 74
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
+++ + +T D + E M G+ + L QG L +
Sbjct: 75 --DVVLKSHDCPYIVQCFGTFITNTDV-FIAMELM--GTCAEKLKKRMQGPIPERILGKM 129
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+A + L YL H +IHRD+KP+N+L+D+ + ++ DFG++ + D + R
Sbjct: 130 TVA--IVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDR-- 183
Query: 416 TVAGTTGYVAPEYHQTLTISE-----KSDIYSFGVLLAVLVVGKFPFDD 459
AG Y+APE ++ ++D++S G+ L L G+FP+ +
Sbjct: 184 -SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 10/200 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++GK+I +K+ A ++L ++ ++ +E H L L+
Sbjct: 159 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 218
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D V E+ G L +S+ R + AR+ A + S L+YLH +++
Sbjct: 219 THDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAE-IVSALDYLH--SEKNVVY 272
Query: 379 RDIKPANVLIDDGMEARISDFGLAKL-MPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RD+K N+++D +I+DFGL K + DG T + T GT Y+APE +
Sbjct: 273 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKTFCGTPEYLAPEVLEDNDYGRA 329
Query: 438 SDIYSFGVLLAVLVVGKFPF 457
D + GV++ ++ G+ PF
Sbjct: 330 VDWWGLGVVMYEMMCGRLPF 349
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K ++ A ++L+ ++V+ K+++I+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVV---KLKEIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N++ID +++DFGLAK + R + GT Y+APE
Sbjct: 159 SLD---LIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 34/220 (15%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
L+ IG GA G+V A G +A+KK+ +P T R E++
Sbjct: 29 LKPIGSGAQGIVCAA-FDTVLGINVAVKKLSRPFQNQTHAKRAYR------------ELV 75
Query: 301 TAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWLA 353
+ H+N++ L +V P L LV E M + +L ++H ELD
Sbjct: 76 LLKCVNHKNIISL-LNVFTPQKTLEEFQDVYLVMELM-DANLCQVIH------MELDHER 127
Query: 354 RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIR 413
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 128 MSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TACTNFM 181
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVG 453
+T T Y APE + + DI+S G ++ LV G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT Y+AP
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPAII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 23/227 (10%)
Query: 235 EDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQ 294
ED E +G G +V K G+ GK A K I + ++++ R ++R+ +
Sbjct: 4 EDHYEMGEELGSGQFAIVRKCRQKGT-GKEYAAKFIKKRRLSSS------RRGVSRE--E 54
Query: 295 IKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLAR 354
I+ E+ I H N++ L +L+ E + G L D L E + L
Sbjct: 55 IEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA-------EKESLTE 107
Query: 355 YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDD----GMEARISDFGLAKLMPDGHT 410
+ + L+ +H H I H D+KP N+++ D ++ DFG+A + G+
Sbjct: 108 DEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN- 166
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ GT +VAPE + ++D++S GV+ +L+ G PF
Sbjct: 167 --EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 34/229 (14%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E++G GA V A V GK A+K I++ + +R R++++
Sbjct: 19 ELLGEGAYAKVQGA-VSLQNGKEYAVKIIEKQAGHSR----------SRVFREVETLYQC 67
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
G ++N+L L LV+E ++ GS IL + Q ++ + R+ R +
Sbjct: 68 QG---NKNILELIEFFEDDTRFYLVFEKLQGGS---ILAHI-QKQKHFNEREASRVVRDV 120
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLIDDGME---ARISDFGLAKLMPDGH-----TRIR 413
A+ L++LH I HRD+KP N+L + + +I DF L M + T
Sbjct: 121 AAALDFLHTKG---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPE 177
Query: 414 ITTVAGTTGYVAPEYHQTLT-----ISEKSDIYSFGVLLAVLVVGKFPF 457
+TT G+ Y+APE + T ++ D++S GV+L +++ G PF
Sbjct: 178 LTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 116/250 (46%), Gaps = 34/250 (13%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKI-----DQPPMAATELLNVRRVLINRKMRQ 294
LE IG G GVVYKA+ +YG+ A+KKI D+ + T +R + I ++++
Sbjct: 6 GLEKIGEGTYGVVYKAQ--NNYGETFALKKIRLEKEDEGIPSTT----IREISILKELK- 58
Query: 295 IKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLAR 354
H N++ L + +LV+E + + L+ +L DV +G L+ +
Sbjct: 59 ------------HSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGG--LESVTA 102
Query: 355 YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRI 414
+ +G+ Y H ++HRD+KP N+LI+ E +I+DFGLA+ G +
Sbjct: 103 KSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKY 157
Query: 415 TTVAGTTGYVAPE-YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWM 473
T T Y AP+ + S DI+S G + A +V G F + + M + R +
Sbjct: 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL 217
Query: 474 RNVISSENPH 483
S P+
Sbjct: 218 GTPNSKNWPN 227
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
+++G G+ G V+ AE + + AIK + + + + +V ++ +++ + E
Sbjct: 24 KMLGKGSFGKVFLAEFKKT-NQFFAIKALKKDVVLMDD--DVECTMVEKRVLSLAWE--- 77
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
H L + + V E++ G L + H S + +L Y A +
Sbjct: 78 -----HPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFY--AAEI 128
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK--LMPDGHTRIRITTVAG 419
GL++LH I++RD+K N+L+D +I+DFG+ K ++ D T G
Sbjct: 129 ILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT----NEFCG 181
Query: 420 TTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T Y+APE + D +SFGVLL +++G+ PF
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 103/229 (44%), Gaps = 36/229 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R L+ K+
Sbjct: 28 NLKPIGSGAQGIVCAA-YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKV------- 79
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ H+N++ L +V P L +V E M + +L ++ + ELD
Sbjct: 80 -----VNHKNIIGL-LNVFTPQKSLEEFQDVYIVMELM-DANLSQVI------QMELDHE 126
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 127 RMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSF 180
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDD 459
+T T Y APE + E DI+S GV++ ++ G FP D
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTD 229
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 131/315 (41%), Gaps = 55/315 (17%)
Query: 228 DIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVL 287
DI F + L E+IG G G VY G + +AI+ ID E N
Sbjct: 29 DIPF----EQLEIGELIGKGRFGQVYH----GRWHGEVAIRLID------IERDN----- 69
Query: 288 INRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRR 347
+++ K E++ + H N++ P ++ K +L ++ D +
Sbjct: 70 -EDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD---AKI 125
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGL---AKL 404
LD +IA+ + G+ YLH I+H+D+K NV D+G + I+DFGL + +
Sbjct: 126 VLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYDNG-KVVITDFGLFSISGV 181
Query: 405 MPDGHTRIRITTVAGTTGYVAPEYHQTLT---------ISEKSDIYSFGVLLAVLVVGKF 455
+ G ++ G ++APE + L+ S+ SD+++ G + L ++
Sbjct: 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREW 241
Query: 456 PFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPE 515
PF T+ + W N + +G G E + I FC + + E
Sbjct: 242 PFK-----TQPAEAIIWQMGTGMKPNLSQ------IGMGKE-----ISDILLFCWAFEQE 285
Query: 516 ERPSSKDVRCMLSQI 530
ERP+ + ML ++
Sbjct: 286 ERPTFTKLMDMLEKL 300
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGHRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I DF LA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILDFYLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
Q++ EI + H N+L L + L+ E+ G L L Q D
Sbjct: 69 QLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQR 124
Query: 354 RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIR 413
I +A L Y H +IHRDIKP N+L+ E +I+DFG + P +R
Sbjct: 125 TATIMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAPS----LR 177
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
T+ GT Y+ PE + +EK D++ GVL L+VG PF+
Sbjct: 178 RKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
LV E++ +G L+D L + R LD + + G+EYL R C+ HRD+
Sbjct: 103 LVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLG--SRRCV-HRDLAAR 156
Query: 385 NVLIDDGMEARISDFGLAKLMP-DGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSF 443
N+L++ +I+DFGLAKL+P D + + APE S +SD++SF
Sbjct: 157 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 216
Query: 444 GVLLAVLVV 452
GV+L L
Sbjct: 217 GVVLYELFT 225
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 14/187 (7%)
Query: 277 ATELLNVRRVLINRKMRQ-IKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL 335
+ EL+ V+ + K+ + +K EII + H N++ + + P +V E+ G L
Sbjct: 43 SNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 336 QDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEAR 395
+ + + GR D AR+ + + SG+ Y H + HRD+K N L+D R
Sbjct: 103 FERI--CNAGRFSEDE-ARFFFQQ-LISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPR 155
Query: 396 --ISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK-SDIYSFGVLLAVLVV 452
I FG +K + + GT Y+APE K +D++S GV L V++V
Sbjct: 156 LKICAFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
Query: 453 GKFPFDD 459
G +PF+D
Sbjct: 213 GAYPFED 219
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 100
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ G R + AR+ A+ + EYLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 159
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N++ID +++DFG AK + R + GT Y+APE
Sbjct: 160 SLD---LIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 211
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 15/152 (9%)
Query: 325 LVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKP 383
LV E M+ G L D IL RE + + + +EYLH ++HRD+KP
Sbjct: 98 LVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLH---SQGVVHRDLKP 149
Query: 384 ANVL-IDDGMEA---RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSD 439
+N+L +D+ RI DFG AK + + + T T +VAPE + E D
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQLRAENGLL--MTPCYTANFVAPEVLKRQGYDEGCD 207
Query: 440 IYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVR 471
I+S G+LL ++ G PF + T E + R
Sbjct: 208 IWSLGILLYTMLAGYTPFANGPSDTPEEILTR 239
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 97/191 (50%), Gaps = 15/191 (7%)
Query: 277 ATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL- 335
A ++N ++ L R ++++ E + H N++ L ++ H L+++ + G L
Sbjct: 40 AAMIINTKK-LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELF 98
Query: 336 QDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDD---GM 392
+DI+ ++ + + + LE + H+ ++HR++KP N+L+ G
Sbjct: 99 EDIV--------AREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGA 150
Query: 393 EARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV 452
+++DFGLA + +G + AGT GY++PE + + D+++ GV+L +L+V
Sbjct: 151 AVKLADFGLA-IEVEGEQQAWFG-FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV 208
Query: 453 GKFPFDDFFQY 463
G PF D Q+
Sbjct: 209 GYPPFWDEDQH 219
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I FGLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILGFGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
LV E++ +G L+D L + R LD + + G+EYL R C+ HRD+
Sbjct: 90 LVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLG--SRRCV-HRDLAAR 143
Query: 385 NVLIDDGMEARISDFGLAKLMP-DGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSF 443
N+L++ +I+DFGLAKL+P D + + APE S +SD++SF
Sbjct: 144 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 203
Query: 444 GVLLAVLVV 452
GV+L L
Sbjct: 204 GVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
LV E++ +G L+D L + R LD + + G+EYL R C+ HRD+
Sbjct: 91 LVMEYLPSGCLRDFLQ---RHRARLDASRLLLYSSQICKGMEYLG--SRRCV-HRDLAAR 144
Query: 385 NVLIDDGMEARISDFGLAKLMP-DGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSF 443
N+L++ +I+DFGLAKL+P D + + APE S +SD++SF
Sbjct: 145 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSF 204
Query: 444 GVLLAVLVV 452
GV+L L
Sbjct: 205 GVVLYELFT 213
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 29/234 (12%)
Query: 224 FKKRDIAFLTKEDSLASLEIIGVGACGVVYKAE---VPGSYGKMIAIKKIDQPPMAATEL 280
F+ RD +E L L+ +G G G V + + G+++A+KK+ +TE
Sbjct: 5 FEDRDPTQF-EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STE- 58
Query: 281 LNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQA---HVTRPDCHLLVYEFMKNGSLQD 337
+R + EI + H N++ + R + L++ E++ GSL+D
Sbjct: 59 ---------EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRD 108
Query: 338 ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARIS 397
L + + +D + + + G+EYL IHRD+ N+L+++ +I
Sbjct: 109 YLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIG 162
Query: 398 DFGLAKLMPDGHTRIRITTVAGTT-GYVAPEYHQTLTISEKSDIYSFGVLLAVL 450
DFGL K++P ++ + + APE S SD++SFGV+L L
Sbjct: 163 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 216
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 36/203 (17%)
Query: 324 LLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKP 383
V E++ G D++ + + R+ + AR+ A ++ L YLH II+RD+K
Sbjct: 129 FFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE-ISLALNYLH---ERGIIYRDLKL 181
Query: 384 ANVLIDDGMEARISDFGLAK--LMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIY 441
NVL+D +++D+G+ K L P T +T GT Y+APE + D +
Sbjct: 182 DNVLLDSEGHIKLTDYGMCKEGLRPGDTT----STFCGTPNYIAPEILRGEDYGFSVDWW 237
Query: 442 SFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMR- 500
+ GVL+ ++ G+ PFD V SS+NP + + L E+Q+R
Sbjct: 238 ALGVLMFEMMAGRSPFD----------------IVGSSDNPDQNTEDYLFQVILEKQIRI 281
Query: 501 ---LVLKIAYFCTS---DDPEER 517
L +K A S DP+ER
Sbjct: 282 PRSLSVKAASVLKSFLNKDPKER 304
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 29/234 (12%)
Query: 224 FKKRDIAFLTKEDSLASLEIIGVGACGVVYKAE---VPGSYGKMIAIKKIDQPPMAATEL 280
F+ RD +E L L+ +G G G V + + G+++A+KK+ +TE
Sbjct: 4 FEDRDPTQF-EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STE- 57
Query: 281 LNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQA---HVTRPDCHLLVYEFMKNGSLQD 337
+R + EI + H N++ + R + L++ E++ GSL+D
Sbjct: 58 ---------EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRD 107
Query: 338 ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARIS 397
L + + +D + + + G+EYL IHRD+ N+L+++ +I
Sbjct: 108 YLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIG 161
Query: 398 DFGLAKLMPDGHTRIRITTVAGTT-GYVAPEYHQTLTISEKSDIYSFGVLLAVL 450
DFGL K++P ++ + + APE S SD++SFGV+L L
Sbjct: 162 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 29/234 (12%)
Query: 224 FKKRDIAFLTKEDSLASLEIIGVGACGVVYKAE---VPGSYGKMIAIKKIDQPPMAATEL 280
F+ RD +E L L+ +G G G V + + G+++A+KK+ +TE
Sbjct: 3 FEDRDPTQF-EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STE- 56
Query: 281 LNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQA---HVTRPDCHLLVYEFMKNGSLQD 337
+R + EI + H N++ + R + L++ E++ GSL+D
Sbjct: 57 ---------EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRD 106
Query: 338 ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARIS 397
L + + +D + + + G+EYL IHRD+ N+L+++ +I
Sbjct: 107 YLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIG 160
Query: 398 DFGLAKLMPDGHTRIRITTVAGTT-GYVAPEYHQTLTISEKSDIYSFGVLLAVL 450
DFGL K++P ++ + + APE S SD++SFGV+L L
Sbjct: 161 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 214
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 83/176 (47%), Gaps = 36/176 (20%)
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-----DGMEARISDFGLAKLMPDG-HTRIRIT 415
SGL +LH + I+HRD+KP N+LI ++A ISDFGL K + G H+ R +
Sbjct: 128 TSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS 184
Query: 416 TVAGTTGYVAPEY-------HQTLTISEKSDIYSFG-VLLAVLVVGKFPFDDFFQYTEEM 467
V GT G++APE + T T+ DI+S G V V+ G PF Q +
Sbjct: 185 GVPGTEGWIAPEMLSEDCKENPTYTV----DIFSAGCVFYYVISEGSHPFGKSLQRQANI 240
Query: 468 NMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
+ + + E I +L+ E+M + DP++RPS+K V
Sbjct: 241 LLGACSLDCLHPEKHEDVIARELI-----EKM----------IAMDPQKRPSAKHV 281
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 137/295 (46%), Gaps = 40/295 (13%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L ++G G+ G+V K + G+++AIKK + + + V+++ MR+IK
Sbjct: 29 NLGLVGEGSYGMVMKCRNKDT-GRIVAIKKF----LESDDDKMVKKI----AMREIK--- 76
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIAR 359
++ H NL+ L + LV+EF+ + IL D+ LD+ +
Sbjct: 77 -LLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH----TILDDLELFPNGLDYQVVQKYLF 131
Query: 360 GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAG 419
+ +G+ + H ++ IIHRDIKP N+L+ ++ DFG A+ + + VA
Sbjct: 132 QIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLA-APGEVYDDEVA- 186
Query: 420 TTGYVAPEYH-QTLTISEKSDIYSFGVLLAVLVVGK--FPFDDFFQYTEEMNMVRWMRNV 476
T Y APE + + D+++ G L+ + +G+ FP D + +++ + N+
Sbjct: 187 TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS--DIDQLYHIMMCLGNL 244
Query: 477 IS------SENPHRA-------IDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERP 518
I ++NP A + + L Y + +V+ +A C DP++RP
Sbjct: 245 IPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP 299
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 29/234 (12%)
Query: 224 FKKRDIAFLTKEDSLASLEIIGVGACGVVYKAE---VPGSYGKMIAIKKIDQPPMAATEL 280
F+ RD +E L L+ +G G G V + + G+++A+KK+ +TE
Sbjct: 6 FEDRDPTQF-EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STE- 59
Query: 281 LNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQA---HVTRPDCHLLVYEFMKNGSLQD 337
+R + EI + H N++ + R + L++ E++ GSL+D
Sbjct: 60 ---------EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRD 109
Query: 338 ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARIS 397
L + + +D + + + G+EYL IHRD+ N+L+++ +I
Sbjct: 110 YLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIG 163
Query: 398 DFGLAKLMPDGHTRIRITTVAGTT-GYVAPEYHQTLTISEKSDIYSFGVLLAVL 450
DFGL K++P ++ + + APE S SD++SFGV+L L
Sbjct: 164 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 217
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 15/152 (9%)
Query: 325 LVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKP 383
LV E M+ G L D IL RE + + + +EYLH ++HRD+KP
Sbjct: 98 LVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVEYLH---SQGVVHRDLKP 149
Query: 384 ANVL-IDDGMEA---RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSD 439
+N+L +D+ RI DFG AK + + + T T +VAPE + E D
Sbjct: 150 SNILYVDESGNPECLRICDFGFAKQLRAENGLL--MTPCYTANFVAPEVLKRQGYDEGCD 207
Query: 440 IYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVR 471
I+S G+LL ++ G PF + T E + R
Sbjct: 208 IWSLGILLYTMLAGYTPFANGPSDTPEEILTR 239
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 23/227 (10%)
Query: 235 EDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQ 294
ED E +G G +V K G+ GK A K I + + ++ R ++R+ +
Sbjct: 25 EDHYEMGEELGSGQFAIVRKCRQKGT-GKEYAAKFIKKRRLXSS------RRGVSRE--E 75
Query: 295 IKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLAR 354
I+ E+ I H N++ L +L+ E + G L D L E + L
Sbjct: 76 IEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLA-------EKESLTE 128
Query: 355 YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDD----GMEARISDFGLAKLMPDGHT 410
+ + L+ +H H I H D+KP N+++ D ++ DFG+A + G+
Sbjct: 129 DEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN- 187
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ GT +VAPE + ++D++S GV+ +L+ G PF
Sbjct: 188 --EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 29/234 (12%)
Query: 224 FKKRDIAFLTKEDSLASLEIIGVGACGVVYKAE---VPGSYGKMIAIKKIDQPPMAATEL 280
F+ RD +E L L+ +G G G V + + G+++A+KK+ +TE
Sbjct: 30 FEDRDPTQF-EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STE- 83
Query: 281 LNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQA---HVTRPDCHLLVYEFMKNGSLQD 337
+R + EI + H N++ + R + L++ E++ GSL+D
Sbjct: 84 ---------EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRD 133
Query: 338 ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARIS 397
L + + +D + + + G+EYL IHRD+ N+L+++ +I
Sbjct: 134 YLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIG 187
Query: 398 DFGLAKLMPDGHTRIRITTVAGTT-GYVAPEYHQTLTISEKSDIYSFGVLLAVL 450
DFGL K++P ++ + + APE S SD++SFGV+L L
Sbjct: 188 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I D GLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILDAGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 22 NLKPIGSGAQGIVCAA-YDAILERNVAIKKLSRPFQNQTHAKRAYR------------EL 68
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L +V E M Q I + ELD
Sbjct: 69 VLMKCVNHKNIIGL-LNVFTPQKSLEEFQDVYIVMELMDANLCQVI-------QMELDHE 120
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 121 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 174
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+T T Y APE + E D++S G ++ +V K FP D+
Sbjct: 175 MMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDY 224
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 25/209 (11%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G YGK+ ++K+ A T + +VL +K +++ TA RN+L V
Sbjct: 28 GGYGKVFQVRKVTG---ANTGKIFAMKVL--KKAMIVRNAKDTAHTKAERNIL---EEVK 79
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR------RE----LDWLARYRIARGMASGLEYL 368
P L+Y F G L IL +S G RE D Y MA G
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG---- 135
Query: 369 HMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEY 428
H+ H+ II+RD+KP N++++ +++DFGL K H T GT Y+APE
Sbjct: 136 HL-HQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAPEI 192
Query: 429 HQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ D +S G L+ ++ G PF
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
IG G+ G+V A S G+ +A+K +D ELL +E++
Sbjct: 53 IGEGSTGIVCLAREKHS-GRQVAVKMMDLRKQQRRELLF--------------NEVVIMR 97
Query: 304 RIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMAS 363
H N++ + + ++ EF++ G+L DI VSQ R L +IA +
Sbjct: 98 DYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDI---VSQVR-----LNEEQIATVCEA 149
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGL-AKLMPDGHTRIRITTVAGTTG 422
L+ L H +IHRDIK ++L+ ++SDFG A++ D R + GT
Sbjct: 150 VLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR---KXLVGTPY 206
Query: 423 YVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
++APE + + DI+S G+++ +V G+ P+
Sbjct: 207 WMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY 241
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 37/223 (16%)
Query: 242 EIIGVGACGVVYKAEVPGS----YGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
E +G G G+V++ S K + +K DQ VL+ +++
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQ-------------VLVKKEI----- 52
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
I+ R HRN+L L + ++++EF+ S DI ++ EL+
Sbjct: 53 SILNIAR--HRNILHLHESFESMEELVMIFEFI---SGLDIFERINTSAFELNEREIVSY 107
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEA--RISDFGLAK-LMPDGHTRIRI 414
+ L++LH ++ I H DI+P N++ + +I +FG A+ L P + R+
Sbjct: 108 VHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF 164
Query: 415 TTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T Y APE HQ +S +D++S G L+ VL+ G PF
Sbjct: 165 TA----PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPF 203
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 98/234 (41%), Gaps = 31/234 (13%)
Query: 290 RKMRQIKSEIITAGRIWHRNLLP-LQAHVTRPDCH-LLVYEFMKNGSLQDILHDVSQGRR 347
RK R E H N+LP L A + P H L+ +M GSL ++LH+ +
Sbjct: 49 RKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF-- 106
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+D + A MA G+ +LH P I + +V+ID+ M ARIS M D
Sbjct: 107 VVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARIS-------MAD 158
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTL---TISEKSDIYSFGVLLAVLVVGKFPFDDFFQYT 464
+ +VAPE Q T +D++SF VLL LV + PF D
Sbjct: 159 VKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL---- 214
Query: 465 EEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERP 518
NM M+ + P + G + ++KI C ++DP +RP
Sbjct: 215 --SNMEIGMKVALEGLRP-------TIPPGISPHVSKLMKI---CMNEDPAKRP 256
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 104/254 (40%), Gaps = 24/254 (9%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E +G G G V + + G+ +AIK+ Q R L + M+++ +
Sbjct: 21 ERLGTGGFGYVLRW-IHQDTGEQVAIKQCRQELSPKN---RERWCLEIQIMKKLNHPNVV 76
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+ R L L + D LL E+ + G L+ L+ + R ++ +
Sbjct: 77 SAREVPDGLQKLAPN----DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DI 131
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEA---RISDFGLAKLMPDGHTRIRITTVA 418
+S L YLH IIHRD+KP N+++ G + +I D G AK + G T
Sbjct: 132 SSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFV 185
Query: 419 GTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVIS 478
GT Y+APE + + D +SFG L + G PF +Q V+W V
Sbjct: 186 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ------PVQWHGKVRE 239
Query: 479 SENPHRAIDSKLLG 492
N H + L G
Sbjct: 240 KSNEHIVVYDDLTG 253
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 234 KEDSLASLEIIGVGACGVVYKAE---VPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+E L L+ +G G G V + + G+++A+KK+ +TE
Sbjct: 7 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STE----------E 52
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQA---HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRR 347
+R + EI + H N++ + R + L++ E++ GSL+D L + +
Sbjct: 53 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQ---KHKE 108
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+D + + + G+EYL IHRD+ N+L+++ +I DFGL K++P
Sbjct: 109 RIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 165
Query: 408 GHTRIRITTVAGTT-GYVAPEYHQTLTISEKSDIYSFGVLLAVL 450
++ + + APE S SD++SFGV+L L
Sbjct: 166 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 209
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 104/254 (40%), Gaps = 24/254 (9%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E +G G G V + + G+ +AIK+ Q R L + M+++ +
Sbjct: 20 ERLGTGGFGYVLRW-IHQDTGEQVAIKQCRQELSPKN---RERWCLEIQIMKKLNHPNVV 75
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+ R L L + D LL E+ + G L+ L+ + R ++ +
Sbjct: 76 SAREVPDGLQKLAPN----DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DI 130
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEA---RISDFGLAKLMPDGHTRIRITTVA 418
+S L YLH IIHRD+KP N+++ G + +I D G AK + G T
Sbjct: 131 SSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL---CTEFV 184
Query: 419 GTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVIS 478
GT Y+APE + + D +SFG L + G PF +Q V+W V
Sbjct: 185 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ------PVQWHGKVRE 238
Query: 479 SENPHRAIDSKLLG 492
N H + L G
Sbjct: 239 KSNEHIVVYDDLTG 252
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 92/187 (49%), Gaps = 14/187 (7%)
Query: 277 ATELLNVRRVLINRKMRQ-IKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL 335
+ EL+ V+ + K+ + +K EII + H N++ + + P +V E+ G L
Sbjct: 43 SNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 336 QDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEAR 395
+ + + GR D AR+ + + SG+ Y H + HRD+K N L+D R
Sbjct: 103 FERI--CNAGRFSEDE-ARFFFQQ-LISGVSYCHAMQ---VCHRDLKLENTLLDGSPAPR 155
Query: 396 --ISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK-SDIYSFGVLLAVLVV 452
I FG +K H++ + T GT Y+APE K +D++S GV L V++V
Sbjct: 156 LKICAFGYSK-SSVLHSQPKDTV--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
Query: 453 GKFPFDD 459
G +PF+D
Sbjct: 213 GAYPFED 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 234 KEDSLASLEIIGVGACGVVYKAE---VPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+E L L+ +G G G V + + G+++A+KK+ +TE
Sbjct: 6 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STE----------E 51
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQA---HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRR 347
+R + EI + H N++ + R + L++ E++ GSL+D L + +
Sbjct: 52 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQ---KHKE 107
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+D + + + G+EYL IHRD+ N+L+++ +I DFGL K++P
Sbjct: 108 RIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 164
Query: 408 GHTRIRITTVAGTT-GYVAPEYHQTLTISEKSDIYSFGVLLAVL 450
++ + + APE S SD++SFGV+L L
Sbjct: 165 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 208
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 131/317 (41%), Gaps = 53/317 (16%)
Query: 234 KEDSLASLEIIGVGACGVVYKAE---VPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+E L L+ +G G G V + + G+++A+KK+ +TE
Sbjct: 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STE----------E 53
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQA---HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRR 347
+R + EI + H N++ + R + L++ E++ GSL+D L + +
Sbjct: 54 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQ---KHKE 109
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+D + + + G+EYL IHRD+ N+L+++ +I DFGL K++P
Sbjct: 110 RIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166
Query: 408 GHTRIRITTVAGTT-GYVAPEYHQTLTISEKSDIYSFGVLLAVLVV----GKFPFDDFFQ 462
++ + + APE S SD++SFGV+L L K P +F +
Sbjct: 167 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMR 226
Query: 463 YTEE--------MNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDP 514
+++ ++N P D + I C +++
Sbjct: 227 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE-------------IYMIMTECWNNNV 273
Query: 515 EERPSSKDVRCMLSQIK 531
+RPS +D+ + QI+
Sbjct: 274 NQRPSFRDLALRVDQIR 290
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 99/230 (43%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 33 NLKPIGSGAQGIVCAA-YDAILERNVAIKKLSRPFQNQTHAKRAYR------------EL 79
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L +V E M Q I + ELD
Sbjct: 80 VLMKCVNHKNIIGL-LNVFTPQKSLEEFQDVYIVMELMDANLCQVI-------QMELDHE 131
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 132 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 185
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+T T Y APE + E D++S G ++ +V K FP D+
Sbjct: 186 MMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDY 235
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 234 KEDSLASLEIIGVGACGVVYKAE---VPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+E L L+ +G G G V + + G+++A+KK+ +TE
Sbjct: 11 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STE----------E 56
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQA---HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRR 347
+R + EI + H N++ + R + L++ E++ GSL+D L + +
Sbjct: 57 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQ---KHKE 112
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+D + + + G+EYL IHRD+ N+L+++ +I DFGL K++P
Sbjct: 113 RIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 169
Query: 408 GHTRIRITTVAGTT-GYVAPEYHQTLTISEKSDIYSFGVLLAVL 450
++ + + APE S SD++SFGV+L L
Sbjct: 170 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 16/204 (7%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+GK I +K + + +N+ R + +++ + + E+ + H N++ +
Sbjct: 35 GSFGKAILVKSTEDGRQYVIKEINISR-MSSKEREESRREVAVLANMKHPNIVQYRESFE 93
Query: 319 RPDCHLLVYEFMKNGSLQDILHD----VSQGRRELDWLARYRIARGMASGLEYLHMYHRP 374
+V ++ + G L ++ + Q + LDW + +A L H
Sbjct: 94 ENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA---------LKHVHDR 144
Query: 375 CIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTI 434
I+HRDIK N+ + ++ DFG+A+++ R GT Y++PE +
Sbjct: 145 KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR--ACIGTPYYLSPEICENKPY 202
Query: 435 SEKSDIYSFGVLLAVLVVGKFPFD 458
+ KSDI++ G +L L K F+
Sbjct: 203 NNKSDIWALGCVLYELCTLKHAFE 226
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 234 KEDSLASLEIIGVGACGVVYKAE---VPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+E L L+ +G G G V + + G+++A+KK+ +TE
Sbjct: 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STE----------E 53
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQA---HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRR 347
+R + EI + H N++ + R + L++ E++ GSL+D L + +
Sbjct: 54 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQ---KHKE 109
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+D + + + G+EYL IHRD+ N+L+++ +I DFGL K++P
Sbjct: 110 RIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166
Query: 408 GHTRIRITTVAGTT-GYVAPEYHQTLTISEKSDIYSFGVLLAVL 450
++ + + APE S SD++SFGV+L L
Sbjct: 167 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 234 KEDSLASLEIIGVGACGVVYKAE---VPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+E L L+ +G G G V + + G+++A+KK+ +TE
Sbjct: 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STE----------E 53
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQA---HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRR 347
+R + EI + H N++ + R + L++ E++ GSL+D L + +
Sbjct: 54 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQ---KHKE 109
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+D + + + G+EYL IHRD+ N+L+++ +I DFGL K++P
Sbjct: 110 RIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166
Query: 408 GHTRIRITTVAGTT-GYVAPEYHQTLTISEKSDIYSFGVLLAVL 450
++ + + APE S SD++SFGV+L L
Sbjct: 167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 30/208 (14%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
GS+G+++ +K + A ++L+ ++V+ K++QI+ + RI LQA V
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVV---KLKQIE-HTLNEKRI-------LQA-VN 99
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR---------RELDWLARYRIARGMASGLEYLH 369
P L + F N +L ++ V+ G R + AR+ A+ + EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ-IVLTFEYLH 158
Query: 370 MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYH 429
+I+RD+KP N+LID +++DFG AK + R + GT +APE
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEALAPEII 210
Query: 430 QTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++ D ++ GVL+ + G PF
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 294 QIKSEIITAGRIWHRNLLPLQ-AHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWL 352
+I+ E+ ++ H N++ L + R D +L+ E + G L D L + L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGGELFDFLAQ----KESLSEE 115
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGM----EARISDFGLAKLMPDG 408
+ + G+ YLH I H D+KP N+++ D ++ DFGLA + DG
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 409 HTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ + GT +VAPE + ++D++S GV+ +L+ G PF
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I D GLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILDRGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 294 QIKSEIITAGRIWHRNLLPLQ-AHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWL 352
+I+ E+ ++ H N++ L + R D +L+ E + G L D L + L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGGELFDFLAQ----KESLSEE 115
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGM----EARISDFGLAKLMPDG 408
+ + G+ YLH I H D+KP N+++ D ++ DFGLA + DG
Sbjct: 116 EATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 409 HTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ + GT +VAPE + ++D++S GV+ +L+ G PF
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 131/317 (41%), Gaps = 53/317 (16%)
Query: 234 KEDSLASLEIIGVGACGVVYKAE---VPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+E L L+ +G G G V + + G+++A+KK+ +TE
Sbjct: 26 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STE----------E 71
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQA---HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRR 347
+R + EI + H N++ + R + L++ E++ GSL+D L + +
Sbjct: 72 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQ---KHKE 127
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+D + + + G+EYL IHRD+ N+L+++ +I DFGL K++P
Sbjct: 128 RIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 184
Query: 408 GHTRIRITTVAGTT-GYVAPEYHQTLTISEKSDIYSFGVLLAVLVV----GKFPFDDFFQ 462
++ + + APE S SD++SFGV+L L K P +F +
Sbjct: 185 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMR 244
Query: 463 YTEE--------MNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDP 514
+++ ++N P D + I C +++
Sbjct: 245 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE-------------IYMIMTECWNNNV 291
Query: 515 EERPSSKDVRCMLSQIK 531
+RPS +D+ + QI+
Sbjct: 292 NQRPSFRDLALRVDQIR 308
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 294 QIKSEIITAGRIWHRNLLPLQ-AHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWL 352
+I+ E+ ++ H N++ L + R D +L+ E + G L D L + L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGGELFDFLAQ----KESLSEE 115
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGM----EARISDFGLAKLMPDG 408
+ + G+ YLH I H D+KP N+++ D ++ DFGLA + DG
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 409 HTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ + GT +VAPE + ++D++S GV+ +L+ G PF
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 109/237 (45%), Gaps = 39/237 (16%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
++ LE +G G VYK + + G +A+K++ T +R + +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKG-LNKTTGVYVALKEVKLDSEEGTPSTAIREISL--- 56
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRR---- 347
M+++K H N++ L + + LV+EFM N L+ + + G
Sbjct: 57 MKELK----------HENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGL 105
Query: 348 ELDWLA--RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM 405
EL+ + ++++ +G+A H I+HRD+KP N+LI+ + ++ DFGLA+
Sbjct: 106 ELNLVKYFQWQLLQGLA-------FCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF 158
Query: 406 PDGHTRIRITTVAG---TTGYVAPE-YHQTLTISEKSDIYSFGVLLAVLVVGK--FP 456
I + T + T Y AP+ + T S DI+S G +LA ++ GK FP
Sbjct: 159 -----GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFP 210
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 294 QIKSEIITAGRIWHRNLLPLQ-AHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWL 352
+I+ E+ ++ H N++ L + R D +L+ E + G L D L + L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGGELFDFLAQ----KESLSEE 115
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGM----EARISDFGLAKLMPDG 408
+ + G+ YLH I H D+KP N+++ D ++ DFGLA + DG
Sbjct: 116 EATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 409 HTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ + GT +VAPE + ++D++S GV+ +L+ G PF
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 294 QIKSEIITAGRIWHRNLLPLQ-AHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWL 352
+I+ E+ ++ H N++ L + R D +L+ E + G L D L + L
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDV-VLILELVSGGELFDFLAQ----KESLSEE 115
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGM----EARISDFGLAKLMPDG 408
+ + G+ YLH I H D+KP N+++ D ++ DFGLA + DG
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 409 HTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ + GT +VAPE + ++D++S GV+ +L+ G PF
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 52/257 (20%)
Query: 221 RPIFKKRDIAFLTKE--DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAAT 278
RP F ++++ E + +L +G GA G V A G +A+KK+ +P
Sbjct: 5 RPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRP---FQ 60
Query: 279 ELLNVRRVLINRKMRQIKSEIITAGRIWHRNLL-------PLQAHVTRPDCHLLVYEFMK 331
+++ +R R++R +K + H N++ P ++ D +L+ + +
Sbjct: 61 SIIHAKRTY--RELRLLK-------HMKHENVIGLLDVFTPARSLEEFNDVYLVTH--LM 109
Query: 332 NGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDG 391
L +I+ + +L Y+I RG L+Y+H IIHRD+KP+N+ +++
Sbjct: 110 GADLNNIVKCQKLTDDHVQFLI-YQILRG----LKYIH---SADIIHRDLKPSNLAVNED 161
Query: 392 MEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-------YHQTLTISEKSDIYSFG 444
E +I D GLA+ HT +T T Y APE Y+QT+ DI+S G
Sbjct: 162 CELKILDGGLAR-----HTDDEMTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVG 210
Query: 445 VLLAVLVVGK--FPFDD 459
++A L+ G+ FP D
Sbjct: 211 CIMAELLTGRTLFPGTD 227
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 36/229 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R L+ K+
Sbjct: 28 NLKPIGSGAQGIVCAA-YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKV------- 79
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ H+N++ L +V P L +V E M + +L ++ + ELD
Sbjct: 80 -----VNHKNIIGL-LNVFTPQKSLEEFQDVYIVMELM-DANLSQVI------QMELDHE 126
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSF 180
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDD 459
+T T Y APE + E DI+S G ++ ++ G FP D
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 131/317 (41%), Gaps = 53/317 (16%)
Query: 234 KEDSLASLEIIGVGACGVVYKAE---VPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+E L L+ +G G G V + + G+++A+KK+ +TE
Sbjct: 26 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STE----------E 71
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQA---HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRR 347
+R + EI + H N++ + R + L++ E++ GSL+D L + +
Sbjct: 72 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQ---KHKE 127
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+D + + + G+EYL IHRD+ N+L+++ +I DFGL K++P
Sbjct: 128 RIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 184
Query: 408 GHTRIRITTVAGTT-GYVAPEYHQTLTISEKSDIYSFGVLLAVLVV----GKFPFDDFFQ 462
++ + + APE S SD++SFGV+L L K P +F +
Sbjct: 185 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMR 244
Query: 463 YTEE--------MNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDP 514
+++ ++N P D + I C +++
Sbjct: 245 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDE-------------IYMIMTECWNNNV 291
Query: 515 EERPSSKDVRCMLSQIK 531
+RPS +D+ + QI+
Sbjct: 292 NQRPSFRDLALRVDQIR 308
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 10/200 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++GK+I +K+ A ++L ++ ++ +E H L L+
Sbjct: 19 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 78
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D V E+ G L H +S+ R + AR+ A + S L+YLH +++
Sbjct: 79 THDRLCFVMEYANGGEL--FFH-LSRERVFSEDRARFYGAE-IVSALDYLH--SEKNVVY 132
Query: 379 RDIKPANVLIDDGMEARISDFGLAKL-MPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RD+K N+++D +I+DFGL K + DG T + GT Y+APE +
Sbjct: 133 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKXFCGTPEYLAPEVLEDNDYGRA 189
Query: 438 SDIYSFGVLLAVLVVGKFPF 457
D + GV++ ++ G+ PF
Sbjct: 190 VDWWGLGVVMYEMMCGRLPF 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 10/200 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++GK+I +K+ A ++L ++ ++ +E H L L+
Sbjct: 20 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 79
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D V E+ G L H +S+ R + AR+ A + S L+YLH +++
Sbjct: 80 THDRLCFVMEYANGGEL--FFH-LSRERVFSEDRARFYGAE-IVSALDYLH--SEKNVVY 133
Query: 379 RDIKPANVLIDDGMEARISDFGLAKL-MPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RD+K N+++D +I+DFGL K + DG T + GT Y+APE +
Sbjct: 134 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKXFCGTPEYLAPEVLEDNDYGRA 190
Query: 438 SDIYSFGVLLAVLVVGKFPF 457
D + GV++ ++ G+ PF
Sbjct: 191 VDWWGLGVVMYEMMCGRLPF 210
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDI 381
C L+V E + G L + D +G + I + + ++YLH + I HRD+
Sbjct: 133 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 187
Query: 382 KPANVLIDDGMEA---RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS 438
KP N+L +++DFG AK + + +TT T YVAPE +
Sbjct: 188 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 439 DIYSFGVLLAVLVVGKFPF 457
D++S GV++ +L+ G PF
Sbjct: 245 DMWSLGVIMYILLCGYPPF 263
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 294 QIKSEIITAGRIWHRNLLPLQ-AHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWL 352
+I+ E+ ++ H N++ L + R D +L+ E + G L D L + L
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDV-VLILELVSGGELFDFLAQ----KESLSEE 115
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGM----EARISDFGLAKLMPDG 408
+ + G+ YLH I H D+KP N+++ D ++ DFGLA + DG
Sbjct: 116 EATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 409 HTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ + GT +VAPE + ++D++S GV+ +L+ G PF
Sbjct: 173 ---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 104/234 (44%), Gaps = 29/234 (12%)
Query: 224 FKKRDIAFLTKEDSLASLEIIGVGACGVVYKAE---VPGSYGKMIAIKKIDQPPMAATEL 280
F+ RD +E L L +G G G V + + G+++A+KK+ +TE
Sbjct: 2 FEDRDPTQF-EERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STE- 55
Query: 281 LNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQA---HVTRPDCHLLVYEFMKNGSLQD 337
+R + EI + H N++ + R + L++ EF+ GSL++
Sbjct: 56 ---------EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EFLPYGSLRE 105
Query: 338 ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARIS 397
L + + +D + + + G+EYL IHRD+ N+L+++ +I
Sbjct: 106 YLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIG 159
Query: 398 DFGLAKLMPDGHTRIRITTVAGTT-GYVAPEYHQTLTISEKSDIYSFGVLLAVL 450
DFGL K++P ++ + + APE S SD++SFGV+L L
Sbjct: 160 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 10/200 (5%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++GK+I +K+ A ++L ++ ++ +E H L L+
Sbjct: 21 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 80
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
D V E+ G L H +S+ R + AR+ A + S L+YLH +++
Sbjct: 81 THDRLCFVMEYANGGEL--FFH-LSRERVFSEDRARFYGAE-IVSALDYLH--SEKNVVY 134
Query: 379 RDIKPANVLIDDGMEARISDFGLAKL-MPDGHTRIRITTVAGTTGYVAPEYHQTLTISEK 437
RD+K N+++D +I+DFGL K + DG T + GT Y+APE +
Sbjct: 135 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT---MKXFCGTPEYLAPEVLEDNDYGRA 191
Query: 438 SDIYSFGVLLAVLVVGKFPF 457
D + GV++ ++ G+ PF
Sbjct: 192 VDWWGLGVVMYEMMCGRLPF 211
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 36/229 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 29 NLKPIGSGAQGIVCAA-YDAILERNVAIKKLSRPFQNQTHAKRAYR------------EL 75
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L +V E M Q I + ELD
Sbjct: 76 VLMKCVNHKNIIGL-LNVFTPQKSLEEFQDVYIVMELMDANLCQVI-------QMELDHE 127
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 128 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 181
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDD 459
+T T Y APE + E DI+S G ++ ++ G FP D
Sbjct: 182 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 230
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 36/229 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 28 NLKPIGSGAQGIVCAA-YDAILERNVAIKKLSRPFQNQTHAKRAYR------------EL 74
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L +V E M Q I + ELD
Sbjct: 75 VLMKCVNHKNIIGL-LNVFTPQKSLEEFQDVYIVMELMDANLCQVI-------QMELDHE 126
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 180
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDD 459
+T T Y APE + E DI+S G ++ ++ G FP D
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 25/205 (12%)
Query: 285 RVLINRKMRQIKSEIITAGRIWHRNLLPL----QAHVTRPDCHLLVYEFMKNGSLQDILH 340
R L + ++ K E + H N++ ++ V C +LV E +G+L+ L
Sbjct: 62 RKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLK 121
Query: 341 --DVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGM-EARIS 397
V + + W R + GL++LH P IIHRD+K N+ I +I
Sbjct: 122 RFKVXKIKVLRSW------CRQILKGLQFLHT-RTPPIIHRDLKCDNIFITGPTGSVKIG 174
Query: 398 DFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
D GLA L + V GT + APE ++ E D+Y+FG ++P
Sbjct: 175 DLGLATLKRASFAK----AVIGTPEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYP- 228
Query: 458 DDFFQYTEEMNMVRWMRNVISSENP 482
Y+E N + R V S P
Sbjct: 229 -----YSECQNAAQIYRRVTSGVKP 248
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 29/234 (12%)
Query: 224 FKKRDIAFLTKEDSLASLEIIGVGACGVVYKAE---VPGSYGKMIAIKKIDQPPMAATEL 280
F+ RD +E L L+ +G G G V + + G+++A+KK+ +TE
Sbjct: 2 FEDRDPTQF-EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STE- 55
Query: 281 LNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQA---HVTRPDCHLLVYEFMKNGSLQD 337
+R + EI + H N++ + R + L++ E++ GSL+D
Sbjct: 56 ---------EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRD 105
Query: 338 ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARIS 397
L ++ +D + + + G+EYL IHRD+ N+L+++ +I
Sbjct: 106 YLQAHAE---RIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIG 159
Query: 398 DFGLAKLMPDGHTRIRITTVAGTT-GYVAPEYHQTLTISEKSDIYSFGVLLAVL 450
DFGL K++P ++ + + APE S SD++SFGV+L L
Sbjct: 160 DFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 36/229 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 28 NLKPIGSGAQGIVCAA-YDAILERNVAIKKLSRPFQNQTHAKRAYR------------EL 74
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L +V E M Q I + ELD
Sbjct: 75 VLMKCVNHKNIIGL-LNVFTPQKSLEEFQDVYIVMELMDANLCQVI-------QMELDHE 126
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 180
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDD 459
+T T Y APE + E DI+S G ++ ++ G FP D
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDI 381
C L+V E + G L + D +G + I + + ++YLH + I HRD+
Sbjct: 94 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 148
Query: 382 KPANVLIDDGMEA---RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS 438
KP N+L +++DFG AK + + +TT T YVAPE +
Sbjct: 149 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 205
Query: 439 DIYSFGVLLAVLVVGKFPF 457
D++S GV++ +L+ G PF
Sbjct: 206 DMWSLGVIMYILLCGYPPF 224
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDI 381
C L+V E + G L + D +G + I + + ++YLH + I HRD+
Sbjct: 93 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 147
Query: 382 KPANVLIDDGMEA---RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS 438
KP N+L +++DFG AK + + +TT T YVAPE +
Sbjct: 148 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 204
Query: 439 DIYSFGVLLAVLVVGKFPF 457
D++S GV++ +L+ G PF
Sbjct: 205 DMWSLGVIMYILLCGYPPF 223
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDI 381
C L+V E + G L + D +G + I + + ++YLH + I HRD+
Sbjct: 87 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 141
Query: 382 KPANVLIDDGMEA---RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS 438
KP N+L +++DFG AK + + +TT T YVAPE +
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 198
Query: 439 DIYSFGVLLAVLVVGKFPF 457
D++S GV++ +L+ G PF
Sbjct: 199 DMWSLGVIMYILLCGYPPF 217
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDI 381
C L+V E + G L + D +G + I + + ++YLH + I HRD+
Sbjct: 95 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 149
Query: 382 KPANVLIDDGMEA---RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS 438
KP N+L +++DFG AK + + +TT T YVAPE +
Sbjct: 150 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 206
Query: 439 DIYSFGVLLAVLVVGKFPF 457
D++S GV++ +L+ G PF
Sbjct: 207 DMWSLGVIMYILLCGYPPF 225
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDI 381
C L+V E + G L + D +G + I + + ++YLH + I HRD+
Sbjct: 88 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 142
Query: 382 KPANVLIDDGMEA---RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS 438
KP N+L +++DFG AK + + +TT T YVAPE +
Sbjct: 143 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 199
Query: 439 DIYSFGVLLAVLVVGKFPF 457
D++S GV++ +L+ G PF
Sbjct: 200 DMWSLGVIMYILLCGYPPF 218
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDI 381
C L+V E + G L + D +G + I + + ++YLH + I HRD+
Sbjct: 89 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 143
Query: 382 KPANVLIDDGMEA---RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS 438
KP N+L +++DFG AK + + +TT T YVAPE +
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 439 DIYSFGVLLAVLVVGKFPF 457
D++S GV++ +L+ G PF
Sbjct: 201 DMWSLGVIMYILLCGYPPF 219
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDI 381
C L+V E + G L + D +G + I + + ++YLH + I HRD+
Sbjct: 139 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 193
Query: 382 KPANVLIDDGMEA---RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS 438
KP N+L +++DFG AK + + +TT T YVAPE +
Sbjct: 194 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 250
Query: 439 DIYSFGVLLAVLVVGKFPF 457
D++S GV++ +L+ G PF
Sbjct: 251 DMWSLGVIMYILLCGYPPF 269
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 36/229 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R L+ K+
Sbjct: 28 NLKPIGSGAQGIVCAA-YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKV------- 79
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ H+N++ L +V P L +V E M + +L ++ + ELD
Sbjct: 80 -----VNHKNIIGL-LNVFTPQKSLEEFQDVYIVMELM-DANLSQVI------QMELDHE 126
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 127 RMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSF 180
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDD 459
+T T Y APE + E DI+S G ++ ++ G FP D
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDI 381
C L+V E + G L + D +G + I + + ++YLH + I HRD+
Sbjct: 89 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 143
Query: 382 KPANVLIDDGMEA---RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS 438
KP N+L +++DFG AK + + +TT T YVAPE +
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 439 DIYSFGVLLAVLVVGKFPF 457
D++S GV++ +L+ G PF
Sbjct: 201 DMWSLGVIMYILLCGYPPF 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 36/229 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 28 NLKPIGSGAQGIVCAA-YDAILERNVAIKKLSRPFQNQTHAKRAYR------------EL 74
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L +V E M + +L ++ + ELD
Sbjct: 75 VLMKCVNHKNIIGL-LNVFTPQKSLEEFQDVYIVMELM-DANLSQVI------QMELDHE 126
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSF 180
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDD 459
+T T Y APE + E DI+S G ++ ++ G FP D
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 36/229 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 28 NLKPIGSGAQGIVCAA-YDAILERNVAIKKLSRPFQNQTHAKRAYR------------EL 74
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L +V E M + +L ++ + ELD
Sbjct: 75 VLMKCVNHKNIIGL-LNVFTPQKSLEEFQDVYIVMELM-DANLSQVI------QMELDHE 126
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 180
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDD 459
+T T Y APE + E DI+S G ++ ++ G FP D
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDI 381
C L+V E + G L + D +G + I + + ++YLH + I HRD+
Sbjct: 103 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 157
Query: 382 KPANVLIDDGMEA---RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS 438
KP N+L +++DFG AK + + +TT T YVAPE +
Sbjct: 158 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 214
Query: 439 DIYSFGVLLAVLVVGKFPF 457
D++S GV++ +L+ G PF
Sbjct: 215 DMWSLGVIMYILLCGYPPF 233
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 24/234 (10%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++L + +G GA G V +A G GK A+ K+ + +T + + L M ++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFG-LGKEDAVLKVAVKMLKSTAHADEKEAL----MSEL 100
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
K I + H N++ L T L++ E+ G D+L+ + + R L+ +
Sbjct: 101 K---IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG---DLLNFLRRKSRVLETDPAF 154
Query: 356 RIARGMASGLEYLH-----------MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKL 404
IA AS + LH + + CI HRD+ NVL+ +G A+I DFGLA+
Sbjct: 155 AIANSTASTRDLLHFSSQVAQGMAFLASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 405 MPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ + I ++APE + +SD++S+G+LL + +G P+
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 106/259 (40%), Gaps = 53/259 (20%)
Query: 231 FLTKEDSLASLEIIGVGACGVVYKAE-VPGSYGKMIAIKKIDQPPMAATELLNVRRVLIN 289
F K D L + +G GA GVV K VP G++ A+K+I R +N
Sbjct: 29 FEVKADDLEPIXELGRGAYGVVEKXRHVPS--GQIXAVKRI--------------RATVN 72
Query: 290 RKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEF--------------MKNGSL 335
+ ++ R L L DC V + + + SL
Sbjct: 73 SQEQK-------------RLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSL 119
Query: 336 QDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEAR 395
V + + +IA + LE+LH + +IHRD+KP+NVLI+ + +
Sbjct: 120 DKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVK 177
Query: 396 ISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE-YHQTLT---ISEKSDIYSFGVLLAVLV 451
DFG++ + D + AG Y APE + L S KSDI+S G+ L
Sbjct: 178 XCDFGISGYLVDDVAK---DIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELA 234
Query: 452 VGKFPFDDFFQYTEEMNMV 470
+ +FP+D + +++ V
Sbjct: 235 ILRFPYDSWGTPFQQLKQV 253
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 36/229 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 28 NLKPIGSGAQGIVCAA-YDAILERNVAIKKLSRPFQNQTHAKRAYR------------EL 74
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L +V E M Q I + ELD
Sbjct: 75 VLMKCVNHKNIIGL-LNVFTPQKSLEEFQDVYIVMELMDANLCQVI-------QMELDHE 126
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 180
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDD 459
+T T Y APE + E DI+S G ++ ++ G FP D
Sbjct: 181 MMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 29/213 (13%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKID-QPPMAATELLNVRRVLINRKMRQIKS----- 297
IG GA G V+KA + G+ +A+K++ Q L +R V + R + +
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 298 --EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
++ T R L L D + + + G + + D+ +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM-----------F 127
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
++ RG L++LH HR ++HRD+KP N+L+ + +++DFGLA++ ++ +T
Sbjct: 128 QLLRG----LDFLHS-HR--VVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALT 177
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLA 448
+V T Y APE + + D++S G + A
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFA 210
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 28 NLKPIGSGAQGIVCAA-YDAILERNVAIKKLSRPFQNQTHAKRAYR------------EL 74
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L +V E M Q I + ELD
Sbjct: 75 VLMKCVNHKNIIGL-LNVFTPQKSLEEFQDVYIVMELMDANLCQVI-------QMELDHE 126
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 180
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+ T Y APE + E DI+S G ++ +V K FP D+
Sbjct: 181 MMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDY 230
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 262 GKMIAIKKIDQPPMA---ATELLNVRRVLINRK---MRQIKSEIITAGRIWHRNLLPLQA 315
GK +KK + A + + RR +R+ I+ E+ I H N++ L
Sbjct: 22 GKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 316 HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPC 375
+L+ E + G L D L + + L + + +G+ YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ--- 134
Query: 376 IIHRDIKPANVLIDD----GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQT 431
I H D+KP N+++ D +I DFGLA + G+ + GT +VAPE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNY 191
Query: 432 LTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++D++S GV+ +L+ G PF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 29/213 (13%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKID-QPPMAATELLNVRRVLINRKMRQIKS----- 297
IG GA G V+KA + G+ +A+K++ Q L +R V + R + +
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 298 --EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
++ T R L L D + + + G + + D+ +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM-----------F 127
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
++ RG L++LH HR ++HRD+KP N+L+ + +++DFGLA++ ++ +T
Sbjct: 128 QLLRG----LDFLHS-HR--VVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALT 177
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLA 448
+V T Y APE + + D++S G + A
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFA 210
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 262 GKMIAIKKIDQPPMA---ATELLNVRRVLINRK---MRQIKSEIITAGRIWHRNLLPLQA 315
G+ +KK + A + + RR +R+ I+ E+ I H N++ L
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 316 HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPC 375
+L+ E + G L D L + + L + + +G+ YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ--- 134
Query: 376 IIHRDIKPANVLIDD----GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQT 431
I H D+KP N+++ D +I DFGLA + G+ + GT +VAPE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPAFVAPEIVNY 191
Query: 432 LTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++D++S GV+ +L+ G PF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 36/203 (17%)
Query: 324 LLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKP 383
V E++ G D++ + + R+ + AR+ A ++ L YLH II+RD+K
Sbjct: 97 FFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE-ISLALNYLH---ERGIIYRDLKL 149
Query: 384 ANVLIDDGMEARISDFGLAK--LMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIY 441
NVL+D +++D+G+ K L P T + GT Y+APE + D +
Sbjct: 150 DNVLLDSEGHIKLTDYGMCKEGLRPGDTT----SXFCGTPNYIAPEILRGEDYGFSVDWW 205
Query: 442 SFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRL 501
+ GVL+ ++ G+ PFD V SS+NP + + L E+Q+R+
Sbjct: 206 ALGVLMFEMMAGRSPFD----------------IVGSSDNPDQNTEDYLFQVILEKQIRI 249
Query: 502 VLKIAYFCTS-------DDPEER 517
++ S DP+ER
Sbjct: 250 PRSMSVKAASVLKSFLNKDPKER 272
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKID-QPPMAATELLNVRRVLINRKMRQIKSEIITA 302
IG GA G V+KA + G+ +A+K++ Q L +R V + R + +
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE------ 72
Query: 303 GRIWHRNLLPL--QAHVTRPDCHL---LVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
H N++ L V+R D LV+E + + L L V + + +
Sbjct: 73 ----HPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTV 417
+ GL++LH HR ++HRD+KP N+L+ + +++DFGLA++ ++ +T+V
Sbjct: 128 Q--LLRGLDFLHS-HR--VVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSV 179
Query: 418 AGTTGYVAPEYHQTLTISEKSDIYSFGVLLA 448
T Y APE + + D++S G + A
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFA 210
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 91/209 (43%), Gaps = 25/209 (11%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G YGK+ ++K+ A T + +VL +K +++ TA RN+L V
Sbjct: 28 GGYGKVFQVRKVTG---ANTGKIFAMKVL--KKAMIVRNAKDTAHTKAERNIL---EEVK 79
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGR------RE----LDWLARYRIARGMASGLEYL 368
P L+Y F G L IL +S G RE D Y MA G
Sbjct: 80 HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG---- 135
Query: 369 HMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEY 428
H+ H+ II+RD+KP N++++ +++DFGL K H GT Y+APE
Sbjct: 136 HL-HQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAPEI 192
Query: 429 HQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ D +S G L+ ++ G PF
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
E++ + ++PL V + E ++ GSL ++ + QG D A Y +
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKE--QGCLPED-RALYYL 191
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLA-KLMPDGHTRIRIT 415
+ + GLEYLH I+H D+K NVL+ DG A + DFG A L PDG + +T
Sbjct: 192 GQAL-EGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLT 247
Query: 416 T--VAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQ 462
+ GT ++APE + K D++S ++ ++ G P+ FF+
Sbjct: 248 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFR 296
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 116/233 (49%), Gaps = 32/233 (13%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDW-- 351
+++ ++G ++++ L LV +++ ++ + S+ ++ L
Sbjct: 77 RLRYFFYSSGE--KKDVVYLN----------LVLDYVPE-TVYRVARHYSRAKQTLPVIY 123
Query: 352 --LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDG 408
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK + G
Sbjct: 124 VKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 176
Query: 409 HTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
+ + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 177 EPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 34/236 (14%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVP-GSYGKM-IAIKKIDQP--PMAATELLNVRRV 286
+ KE L ++++G GA G VYK VP G K+ +AIK +++ P A E ++
Sbjct: 11 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMD---- 66
Query: 287 LINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILH---DVS 343
E + + H +L+ L P L V + M +G L + +H D
Sbjct: 67 -----------EALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNI 114
Query: 344 QGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK 403
+ L+W + +A G+ YL ++HRD+ NVL+ +I+DFGLA+
Sbjct: 115 GSQLLLNWCVQ------IAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLAR 165
Query: 404 LMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
L+ ++A E + +SD++S+GV + ++ G P+D
Sbjct: 166 LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 325 LVYEFMKNGSLQDIL--HDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIK 382
+V E+M G L +++ +DV + W AR+ A + + L H IHRD+K
Sbjct: 146 MVMEYMPGGDLVNLMSNYDVPEK-----W-ARFYTAEVVLA----LDAIHSMGFIHRDVK 195
Query: 383 PANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLT----ISEKS 438
P N+L+D +++DFG M + +R T GT Y++PE ++ +
Sbjct: 196 PDNMLLDKSGHLKLADFGTCMKM-NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGREC 254
Query: 439 DIYSFGVLLAVLVVGKFPF 457
D +S GV L ++VG PF
Sbjct: 255 DWWSVGVFLYEMLVGDTPF 273
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 101/226 (44%), Gaps = 28/226 (12%)
Query: 234 KEDSLASLEIIGVGACGVVYKAE---VPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+E L L+ +G G G V + + G+++A+KK+ +TE
Sbjct: 9 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STE----------E 54
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQA---HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRR 347
+R + EI + H N++ + R + L++ E++ GSL+D L + +
Sbjct: 55 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM-EYLPYGSLRDYLQ---KHKE 110
Query: 348 ELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+D + + + G+EYL IHR++ N+L+++ +I DFGL K++P
Sbjct: 111 RIDHIKLLQYTSQICKGMEYLGTKR---YIHRNLATRNILVENENRVKIGDFGLTKVLPQ 167
Query: 408 GHTRIRITTVAGTT-GYVAPEYHQTLTISEKSDIYSFGVLLAVLVV 452
++ + + APE S SD++SFGV+L L
Sbjct: 168 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 36/203 (17%)
Query: 324 LLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKP 383
V E++ G D++ + + R+ + AR+ A ++ L YLH II+RD+K
Sbjct: 82 FFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE-ISLALNYLH---ERGIIYRDLKL 134
Query: 384 ANVLIDDGMEARISDFGLAK--LMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIY 441
NVL+D +++D+G+ K L P T + GT Y+APE + D +
Sbjct: 135 DNVLLDSEGHIKLTDYGMCKEGLRPGDTT----SXFCGTPNYIAPEILRGEDYGFSVDWW 190
Query: 442 SFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMR- 500
+ GVL+ ++ G+ PFD V SS+NP + + L E+Q+R
Sbjct: 191 ALGVLMFEMMAGRSPFD----------------IVGSSDNPDQNTEDYLFQVILEKQIRI 234
Query: 501 ---LVLKIAYFCTS---DDPEER 517
L +K A S DP+ER
Sbjct: 235 PRSLSVKAASVLKSFLNKDPKER 257
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
+V E+M G L +++ + + W AR+ A + + L H IHRD+KP
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPEK---W-ARFYTAEVVLA----LDAIHSMGFIHRDVKPD 202
Query: 385 NVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLT----ISEKSDI 440
N+L+D +++DFG M + +R T GT Y++PE ++ + D
Sbjct: 203 NMLLDKSGHLKLADFGTCMKM-NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 261
Query: 441 YSFGVLLAVLVVGKFPF 457
+S GV L ++VG PF
Sbjct: 262 WSVGVFLYEMLVGDTPF 278
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 34/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLN-VRRVLINRKMRQ 294
D L + +G GA G V AE + I K D+P A T + ++ + +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEA-------VGIDK-DKPKEAVTVAVKMLKDDATEKDLSD 86
Query: 295 IKSEIITAGRIW-HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
+ SE+ I H+N++ L T+ ++ E+ G+L++ L + RR
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEX 142
Query: 354 RYRIAR----------------GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARIS 397
Y I R +A G+EYL + CI HRD+ NVL+ + +I+
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIA 199
Query: 398 DFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
DFGLA+ + + + T ++APE + +SD++SFGVL+ + +G P
Sbjct: 200 DFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 457 F 457
+
Sbjct: 260 Y 260
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
+V E+M G L +++ + + W AR+ A + + L H IHRD+KP
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPEK---W-ARFYTAEVVLA----LDAIHSMGFIHRDVKPD 202
Query: 385 NVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLT----ISEKSDI 440
N+L+D +++DFG M + +R T GT Y++PE ++ + D
Sbjct: 203 NMLLDKSGHLKLADFGTCMKM-NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 261
Query: 441 YSFGVLLAVLVVGKFPF 457
+S GV L ++VG PF
Sbjct: 262 WSVGVFLYEMLVGDTPF 278
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 36/203 (17%)
Query: 324 LLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKP 383
V E++ G D++ + + R+ + AR+ A ++ L YLH II+RD+K
Sbjct: 86 FFVIEYVNGG---DLMFHMQRQRKLPEEHARFYSAE-ISLALNYLH---ERGIIYRDLKL 138
Query: 384 ANVLIDDGMEARISDFGLAK--LMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIY 441
NVL+D +++D+G+ K L P T + GT Y+APE + D +
Sbjct: 139 DNVLLDSEGHIKLTDYGMCKEGLRPGDTT----SXFCGTPNYIAPEILRGEDYGFSVDWW 194
Query: 442 SFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMR- 500
+ GVL+ ++ G+ PFD V SS+NP + + L E+Q+R
Sbjct: 195 ALGVLMFEMMAGRSPFD----------------IVGSSDNPDQNTEDYLFQVILEKQIRI 238
Query: 501 ---LVLKIAYFCTS---DDPEER 517
L +K A S DP+ER
Sbjct: 239 PRSLSVKAASVLKSFLNKDPKER 261
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 31/267 (11%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++GK+ K + +AA +++ + ++ EI H ++ L
Sbjct: 22 GAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
++ EF G++ I+ ++ +G L +I LE L+ H IIH
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRG------LTEPQIQVVCRQMLEALNFLHSKRIIH 132
Query: 379 RDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE-- 436
RD+K NVL+ + R++DFG++ + T + + GT ++APE T+ +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 190
Query: 437 ---KSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGN 493
K+DI+S G+ L + + P E+N +R + + S+ P SK
Sbjct: 191 YDYKADIWSLGITLIEMAQIEPPH-------HELNPMRVLLKIAKSDPPTLLTPSK---- 239
Query: 494 GYEEQMRLVLKIAYFCTSDDPEERPSS 520
+ + R LKIA +PE RPS+
Sbjct: 240 -WSVEFRDFLKIAL---DKNPETRPSA 262
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 25/220 (11%)
Query: 321 DCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRD 380
D +++V E + SL+D+ + S R+ +A M S +EY+H + IHRD
Sbjct: 78 DYNVMVMELL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIHSKN---FIHRD 130
Query: 381 IKPANVLIDDGMEAR---ISDFGLAKLMPDGHTRIRI-----TTVAGTTGYVAPEYHQTL 432
+KP N L+ G + I DFGLAK D T I + GT Y + H +
Sbjct: 131 VKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGI 190
Query: 433 TISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
S + D+ S G +L +G P+ T+ R IS + I+ +L
Sbjct: 191 EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYER-----ISEKKMSTPIE--VLC 243
Query: 493 NGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCMLSQIKH 532
GY + L FC S +++P +R + + H
Sbjct: 244 KGYPSEFSTYLN---FCRSLRFDDKPDYSYLRQLFRNLFH 280
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 34/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLN-VRRVLINRKMRQ 294
D L + +G GA G V AE + I K D+P A T + ++ + +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEA-------VGIDK-DKPKEAVTVAVKMLKDDATEKDLSD 86
Query: 295 IKSEIITAGRIW-HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
+ SE+ I H+N++ L T+ ++ E+ G+L++ L + RR
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEY 142
Query: 354 RYRIAR----------------GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARIS 397
Y I R +A G+EYL + CI HRD+ NVL+ + RI+
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMRIA 199
Query: 398 DFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
DFGLA+ + + + T ++APE + +SD++SFGVL+ + +G P
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 457 F 457
+
Sbjct: 260 Y 260
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQGKAFKNRELQIMRKLDHCNIV 76
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 77 RLRYFFYSSGE-------------KKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVI 122
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 123 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 176 GEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDI 381
C L++ E M+ G L + + +G + I R + + +++LH ++ I HRD+
Sbjct: 100 CLLIIMECMEGGELFSRIQE--RGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDV 154
Query: 382 KPANVLI---DDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS 438
KP N+L + +++DFG AK T+ + T T YVAPE +
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFAKET----TQNALQTPCYTPYYVAPEVLGPEKYDKSC 210
Query: 439 DIYSFGVLLAVLVVGKFPF 457
D++S GV++ +L+ G PF
Sbjct: 211 DMWSLGVIMYILLCGFPPF 229
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 31/267 (11%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G++GK+ K + +AA +++ + ++ EI H ++ L
Sbjct: 30 GAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
++ EF G++ I+ ++ +G L +I LE L+ H IIH
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRG------LTEPQIQVVCRQMLEALNFLHSKRIIH 140
Query: 379 RDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISE-- 436
RD+K NVL+ + R++DFG++ + T + + GT ++APE T+ +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 198
Query: 437 ---KSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGN 493
K+DI+S G+ L + + P E+N +R + + S+ P SK
Sbjct: 199 YDYKADIWSLGITLIEMAQIEPPH-------HELNPMRVLLKIAKSDPPTLLTPSK---- 247
Query: 494 GYEEQMRLVLKIAYFCTSDDPEERPSS 520
+ + R LKIA +PE RPS+
Sbjct: 248 -WSVEFRDFLKIAL---DKNPETRPSA 270
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 11/139 (7%)
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDI 381
C L+V E + G L + D +G + I + + ++YLH + I HRD+
Sbjct: 133 CLLIVXECLDGGELFSRIQD--RGDQAFTEREASEIXKSIGEAIQYLHSIN---IAHRDV 187
Query: 382 KPANVLIDDGMEA---RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS 438
KP N+L +++DFG AK ++ +TT T YVAPE +
Sbjct: 188 KPENLLYTSKRPNAILKLTDFGFAKETTSHNS---LTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 439 DIYSFGVLLAVLVVGKFPF 457
D +S GV+ +L+ G PF
Sbjct: 245 DXWSLGVIXYILLCGYPPF 263
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 19 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 77
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 78 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 123
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 124 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 176
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 177 GEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 227
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDI 381
C L++ E M+ G L + + +G + I R + + +++LH ++ I HRD+
Sbjct: 81 CLLIIMECMEGGELFSRIQE--RGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDV 135
Query: 382 KPANVLI---DDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS 438
KP N+L + +++DFG AK T+ + T T YVAPE +
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFAKET----TQNALQTPCYTPYYVAPEVLGPEKYDKSC 191
Query: 439 DIYSFGVLLAVLVVGKFPF 457
D++S GV++ +L+ G PF
Sbjct: 192 DMWSLGVIMYILLCGFPPF 210
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 98/230 (42%), Gaps = 36/230 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 28 NLKPIGSGAQGIVCAA-YDAILERNVAIKKLSRPFQNQTHAKRAYR------------EL 74
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L +V E M Q I + ELD
Sbjct: 75 VLMKCVNHKNIIGL-LNVFTPQKSLEEFQDVYIVMELMDANLCQVI-------QMELDHE 126
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 180
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDDF 460
+ T Y APE + E D++S G ++ +V K FP D+
Sbjct: 181 MMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDY 230
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
E++ + ++PL V + E ++ GSL ++ + QG D A Y +
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKE--QGCLPED-RALYYL 172
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLA-KLMPDGHTRIRIT 415
+ + GLEYLH I+H D+K NVL+ DG A + DFG A L PDG + +T
Sbjct: 173 GQAL-EGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLT 228
Query: 416 T--VAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQ 462
+ GT ++APE + K D++S ++ ++ G P+ FF+
Sbjct: 229 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFR 277
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQGKAFKNRELQIMRKLDHCNIV 76
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 77 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 122
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 123 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 176 GEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 77 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 122
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 123 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 176 GEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 97/229 (42%), Gaps = 36/229 (15%)
Query: 240 SLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+L+ IG GA G+V A + +AIKK+ +P T R E+
Sbjct: 30 NLKPIGSGAQGIVCAA-YDAILERNVAIKKLSRPFQNQTHAKRAYR------------EL 76
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHL-------LVYEFMKNGSLQDILHDVSQGRRELDWL 352
+ + H+N++ L +V P L +V E M Q I + ELD
Sbjct: 77 VLMKCVNHKNIIGL-LNVFTPQKSLEEFQDVYIVMELMDANLCQVI-------QMELDHE 128
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ M G+++LH IIHRD+KP+N+++ +I DFGLA+ T
Sbjct: 129 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSF 182
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGK--FPFDD 459
+ T Y APE + E DI+S G ++ ++ G FP D
Sbjct: 183 MMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 231
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 26 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 84
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 85 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 130
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 131 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 183
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 184 GEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 234
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 25/220 (11%)
Query: 321 DCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRD 380
D +++V E + SL+D+ + S R+ +A M S +EY+H + IHRD
Sbjct: 78 DYNVMVMELL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIHSKN---FIHRD 130
Query: 381 IKPANVLIDDGMEAR---ISDFGLAKLMPDGHTRIRI-----TTVAGTTGYVAPEYHQTL 432
+KP N L+ G + I DFGLAK D T I + GT Y + H +
Sbjct: 131 VKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGI 190
Query: 433 TISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
S + D+ S G +L +G P+ T+ R IS + I+ +L
Sbjct: 191 EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYER-----ISEKKMSTPIE--VLC 243
Query: 493 NGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCMLSQIKH 532
GY + L FC S +++P +R + + H
Sbjct: 244 KGYPSEFATYLN---FCRSLRFDDKPDYSYLRQLFRNLFH 280
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 30 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 88
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 89 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 134
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 135 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 187
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 188 GEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 238
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 12/181 (6%)
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCH--LLVYEFMKNGSLQDILHDVSQGRRELDW 351
+K EI R+ H+N++ L + + +V E+ G +Q++L V + R +
Sbjct: 52 NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQ 110
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTR 411
Y + GLEYLH I+H+DIKP N+L+ G +IS G+A+ +
Sbjct: 111 AHGYFCQ--LIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD 165
Query: 412 IRITTVAGTTGYVAPEYHQTL-TISE-KSDIYSFGVLLAVLVVGKFPF--DDFFQYTEEM 467
T G+ + PE L T S K DI+S GV L + G +PF D+ ++ E +
Sbjct: 166 DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENI 225
Query: 468 N 468
Sbjct: 226 G 226
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 25/220 (11%)
Query: 321 DCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRD 380
D +++V E + SL+D+ + S R+ +A M S +EY+H + IHRD
Sbjct: 76 DYNVMVMELL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIHSKN---FIHRD 128
Query: 381 IKPANVLIDDGMEAR---ISDFGLAKLMPDGHTRIRI-----TTVAGTTGYVAPEYHQTL 432
+KP N L+ G + I DFGLAK D T I + GT Y + H +
Sbjct: 129 VKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGI 188
Query: 433 TISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLG 492
S + D+ S G +L +G P+ T+ R IS + I+ +L
Sbjct: 189 EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYER-----ISEKKMSTPIE--VLC 241
Query: 493 NGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCMLSQIKH 532
GY + L FC S +++P +R + + H
Sbjct: 242 KGYPSEFATYLN---FCRSLRFDDKPDYSYLRQLFRNLFH 278
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 77 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 122
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 123 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 176 GEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 77 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 122
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 123 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 176 GEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 22 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 80
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 81 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 126
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 127 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 179
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 180 GEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 230
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 31 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 89
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 90 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 135
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 136 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 188
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 189 GEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 239
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 34/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLN-VRRVLINRKMRQ 294
D L + +G GA G V AE + I K D+P A T + ++ + +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEA-------VGIDK-DKPKEAVTVAVKMLKDDATEKDLSD 86
Query: 295 IKSEIITAGRIW-HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
+ SE+ I H+N++ L T+ ++ E+ G+L++ L + RR
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEY 142
Query: 354 RYRIAR----------------GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARIS 397
Y I R +A G+EYL + CI HRD+ NVL+ + +I+
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIA 199
Query: 398 DFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
DFGLA+ + + + T ++APE + +SD++SFGVL+ + +G P
Sbjct: 200 DFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 457 F 457
+
Sbjct: 260 Y 260
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 262 GKMIAIKKIDQPPMA---ATELLNVRRVLINRK---MRQIKSEIITAGRIWHRNLLPLQA 315
G+ +KK + A + + RR +R+ I+ E+ I H N++ L
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 316 HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPC 375
+L+ E + G L D L + + L + + +G+ YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ--- 134
Query: 376 IIHRDIKPANVLIDD----GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQT 431
I H D+KP N+++ D +I DFGLA + G+ + GT +VAPE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNY 191
Query: 432 LTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++D++S GV+ +L+ G PF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQGKAFKNRELQIMRKLDHCNIV 76
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 77 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 122
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 123 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 176 GEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 226
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 37 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 95
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 96 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 141
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 142 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 194
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 195 GEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 245
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 30 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 88
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 89 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 134
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 135 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 187
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 188 GEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 238
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 29/227 (12%)
Query: 250 GVVYKAEVPGSY---------GKMIAIKKIDQPPMA---ATELLNVRRVLINRK---MRQ 294
G V++ E Y G+ +KK + A + + RR +R+
Sbjct: 1 GTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 295 IKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLAR 354
I+ E+ I H N++ L +L+ E + G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 355 YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDD----GMEARISDFGLAKLMPDGHT 410
+ + +G+ YLH I H D+KP N+++ D +I DFGLA + G+
Sbjct: 117 TEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN- 172
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ GT +VAPE + ++D++S GV+ +L+ G PF
Sbjct: 173 --EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 262 GKMIAIKKIDQPPMA---ATELLNVRRVLINRK---MRQIKSEIITAGRIWHRNLLPLQA 315
G+ +KK + A + + RR +R+ I+ E+ I H N++ L
Sbjct: 21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 80
Query: 316 HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPC 375
+L+ E + G L D L + + L + + +G+ YLH
Sbjct: 81 VYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ--- 133
Query: 376 IIHRDIKPANVLIDD----GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQT 431
I H D+KP N+++ D +I DFGLA + G+ + GT +VAPE
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNY 190
Query: 432 LTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++D++S GV+ +L+ G PF
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 29/227 (12%)
Query: 250 GVVYKAEVPGSY---------GKMIAIKKIDQPPMA---ATELLNVRRVLINRK---MRQ 294
G V++ E Y G+ +KK + A + + RR +R+
Sbjct: 1 GTVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 295 IKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLAR 354
I+ E+ I H N++ L +L+ E + G L D L + + L
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEA 116
Query: 355 YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDD----GMEARISDFGLAKLMPDGHT 410
+ + +G+ YLH I H D+KP N+++ D +I DFGLA + G+
Sbjct: 117 TEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN- 172
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ GT +VAPE + ++D++S GV+ +L+ G PF
Sbjct: 173 --EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 17/228 (7%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSE 298
+++ +G GA G V+ A V K + +K I + + + + K+ ++ E
Sbjct: 27 STMSPLGSGAFGFVWTA-VDKEKNKEVVVKFIKKEKVLEDCWIE------DPKLGKVTLE 79
Query: 299 IITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIA 358
I R+ H N++ + LV E K+GS D+ + + R + LA Y I
Sbjct: 80 IAILSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLASY-IF 136
Query: 359 RGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVA 418
R + S + YL + IIHRDIK N++I + ++ DFG A + G T
Sbjct: 137 RQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKL---FYTFC 190
Query: 419 GTTGYVAPEYHQTLTI-SEKSDIYSFGVLLAVLVVGKFPFDDFFQYTE 465
GT Y APE + +++S GV L LV + PF + + E
Sbjct: 191 GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVE 238
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 16/151 (10%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
V E++ G D+++ + Q + + A + A ++ GL +LH + II+RD+K
Sbjct: 97 FVMEYVNGG---DLMYHIQQVGKFKEPQAVFYAAE-ISIGLFFLH---KRGIIYRDLKLD 149
Query: 385 NVLIDDGMEARISDFGLAK-LMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSF 443
NV++D +I+DFG+ K M DG T GT Y+APE + D +++
Sbjct: 150 NVMLDSEGHIKIADFGMCKEHMMDGVT---TREFCGTPDYIAPEIIAYQPYGKSVDWWAY 206
Query: 444 GVLLAVLVVGKFPF-----DDFFQYTEEMNM 469
GVLL ++ G+ PF D+ FQ E N+
Sbjct: 207 GVLLYEMLAGQPPFDGEDEDELFQSIMEHNV 237
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 23 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 81
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 82 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 127
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 128 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 180
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 181 GEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 231
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 46 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 104
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 105 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 150
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 151 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 203
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 204 GEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 254
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 262 GKMIAIKKIDQPPMA---ATELLNVRRVLINRK---MRQIKSEIITAGRIWHRNLLPLQA 315
G+ +KK + A + + RR +R+ I+ E+ I H N++ L
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 316 HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPC 375
+L+ E + G L D L + + L + + +G+ YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ--- 134
Query: 376 IIHRDIKPANVLIDD----GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQT 431
I H D+KP N+++ D +I DFGLA + G+ + GT +VAPE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNY 191
Query: 432 LTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++D++S GV+ +L+ G PF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 262 GKMIAIKKIDQPPMA---ATELLNVRRVLINRK---MRQIKSEIITAGRIWHRNLLPLQA 315
G+ +KK + A + + RR +R+ I+ E+ I H N++ L
Sbjct: 21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 80
Query: 316 HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPC 375
+L+ E + G L D L + + L + + +G+ YLH
Sbjct: 81 VYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ--- 133
Query: 376 IIHRDIKPANVLIDD----GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQT 431
I H D+KP N+++ D +I DFGLA + G+ + GT +VAPE
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNY 190
Query: 432 LTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++D++S GV+ +L+ G PF
Sbjct: 191 EPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 34/236 (14%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVP-GSYGKM-IAIKKIDQP--PMAATELLNVRRV 286
+ KE L ++++G GA G VYK VP G K+ +AIK +++ P A E ++
Sbjct: 34 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMD---- 89
Query: 287 LINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILH---DVS 343
E + + H +L+ L P L V + M +G L + +H D
Sbjct: 90 -----------EALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNI 137
Query: 344 QGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK 403
+ L+W + +A G+ YL ++HRD+ NVL+ +I+DFGLA+
Sbjct: 138 GSQLLLNWCVQ------IAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLAR 188
Query: 404 LMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
L+ ++A E + +SD++S+GV + ++ G P+D
Sbjct: 189 LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 48/228 (21%)
Query: 241 LEIIGVGACGVVYKAEVPGSY-GKMIAIK----KIDQPPMAATELLNVRRVLINRKMRQI 295
LE +G G G V++ GS+ G+ +A+K + ++ TEL N + + I
Sbjct: 13 LECVGKGRYGEVWR----GSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFI 68
Query: 296 KSEIIT---AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWL 352
S++ + + ++W L+ + + GSL D L + LD +
Sbjct: 69 ASDMTSRHSSTQLW------------------LITHYHEMGSLYDYLQLTT-----LDTV 105
Query: 353 ARYRIARGMASGLEYLHM-----YHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+ RI +ASGL +LH+ +P I HRD+K N+L+ + I+D GLA +
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
Query: 408 GHTRIRI--TTVAGTTGYVAPE-YHQTLTIS-----EKSDIYSFGVLL 447
++ + GT Y+APE +T+ + ++ DI++FG++L
Sbjct: 166 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 262 GKMIAIKKIDQPPMA---ATELLNVRRVLINRK---MRQIKSEIITAGRIWHRNLLPLQA 315
G+ +KK + A + + RR +R+ I+ E+ I H N++ L
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 316 HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPC 375
+L+ E + G L D L + + L + + +G+ YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ--- 134
Query: 376 IIHRDIKPANVLIDD----GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQT 431
I H D+KP N+++ D +I DFGLA + G+ + GT +VAPE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNY 191
Query: 432 LTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++D++S GV+ +L+ G PF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMA-ATELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 15 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 69
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E M+ +QD+ +++ + LAR +
Sbjct: 70 SG---FSGVIRLLDWFERPDSFVLILERME--PVQDLFDFITERGALQEELARSFFWQV- 123
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 124 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 176
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ +E
Sbjct: 177 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 234
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 235 CQHLIRWCLALRPSDRP 251
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 48/228 (21%)
Query: 241 LEIIGVGACGVVYKAEVPGSY-GKMIAIK----KIDQPPMAATELLNVRRVLINRKMRQI 295
LE +G G G V++ GS+ G+ +A+K + ++ TEL N + + I
Sbjct: 13 LECVGKGRYGEVWR----GSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFI 68
Query: 296 KSEIIT---AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWL 352
S++ + + ++W L+ + + GSL D L + LD +
Sbjct: 69 ASDMTSRHSSTQLW------------------LITHYHEMGSLYDYLQLTT-----LDTV 105
Query: 353 ARYRIARGMASGLEYLHM-----YHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
+ RI +ASGL +LH+ +P I HRD+K N+L+ + I+D GLA +
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
Query: 408 GHTRIRI--TTVAGTTGYVAPE-YHQTLTIS-----EKSDIYSFGVLL 447
++ + GT Y+APE +T+ + ++ DI++FG++L
Sbjct: 166 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVL 213
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 52 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 110
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 111 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 156
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 157 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 210 GEPNV---SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 53/247 (21%)
Query: 222 PIFKKRDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSY-GKMIAIK----KIDQPPMA 276
P +R +A + LE +G G G V++ GS+ G+ +A+K + ++
Sbjct: 28 PFLVQRTVA-----RQITLLECVGKGRYGEVWR----GSWQGENVAVKIFSSRDEKSWFR 78
Query: 277 ATELLNVRRVLINRKMRQIKSEIIT---AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNG 333
TEL N + + I S++ + + ++W L+ + + G
Sbjct: 79 ETELYNTVMLRHENILGFIASDMTSRHSSTQLW------------------LITHYHEMG 120
Query: 334 SLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHM-----YHRPCIIHRDIKPANVLI 388
SL D L + LD ++ RI +ASGL +LH+ +P I HRD+K N+L+
Sbjct: 121 SLYDYLQLTT-----LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV 175
Query: 389 DDGMEARISDFGLAKLMPDGHTRIRI--TTVAGTTGYVAPE-YHQTLTIS-----EKSDI 440
+ I+D GLA + ++ + GT Y+APE +T+ + ++ DI
Sbjct: 176 KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 235
Query: 441 YSFGVLL 447
++FG++L
Sbjct: 236 WAFGLVL 242
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 262 GKMIAIKKIDQPPMA---ATELLNVRRVLINRK---MRQIKSEIITAGRIWHRNLLPLQA 315
G+ +KK + A + + RR +R+ I+ E+ I H N++ L
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 316 HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPC 375
+L+ E + G L D L + + L + + +G+ YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ--- 134
Query: 376 IIHRDIKPANVLIDD----GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQT 431
I H D+KP N+++ D +I DFGLA + G+ + GT +VAPE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNY 191
Query: 432 LTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++D++S GV+ +L+ G PF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
V E++ G D+++ + Q R + A + A +A GL +L II+RD+K
Sbjct: 419 FVMEYVNGG---DLMYHIQQVGRFKEPHAVFYAAE-IAIGLFFLQSKG---IIYRDLKLD 471
Query: 385 NVLIDDGMEARISDFGLAKL-MPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSF 443
NV++D +I+DFG+ K + DG + GT Y+APE + D ++F
Sbjct: 472 NVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 528
Query: 444 GVLLAVLVVGKFPF-----DDFFQYTEEMNMV 470
GVLL ++ G+ PF D+ FQ E N+
Sbjct: 529 GVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA 560
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 26/233 (11%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++L + +G GA G V +A G GK A+ K+ + +T + + L M ++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFG-LGKEDAVLKVAVKMLKSTAHADEKEAL----MSEL 100
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILH-------DVSQGRR- 347
K I + H N++ L T L++ E+ G L + L D GR
Sbjct: 101 K---IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 157
Query: 348 ELDWLARY--RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM 405
EL L + ++A+GMA + + CI HRD+ NVL+ +G A+I DFGLA+ +
Sbjct: 158 ELRDLLHFSSQVAQGMA------FLASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDI 210
Query: 406 PDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ I ++APE + +SD++S+G+LL + +G P+
Sbjct: 211 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 52 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 110
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 111 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 156
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 157 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 210 GEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 262 GKMIAIKKIDQPPMA---ATELLNVRRVLINRK---MRQIKSEIITAGRIWHRNLLPLQA 315
G+ +KK + A + + RR +R+ I+ E+ I H N++ L
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 316 HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPC 375
+L+ E + G L D L + + L + + +G+ YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ--- 134
Query: 376 IIHRDIKPANVLIDD----GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQT 431
I H D+KP N+++ D +I DFGLA + G+ + GT +VAPE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNY 191
Query: 432 LTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++D++S GV+ +L+ G PF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 26/233 (11%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++L + +G GA G V +A G GK A+ K+ + +T + + L M ++
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFG-LGKEDAVLKVAVKMLKSTAHADEKEAL----MSEL 92
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILH-------DVSQGRR- 347
K I + H N++ L T L++ E+ G L + L D GR
Sbjct: 93 K---IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPL 149
Query: 348 ELDWLARY--RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM 405
EL L + ++A+GMA + + CI HRD+ NVL+ +G A+I DFGLA+ +
Sbjct: 150 ELRDLLHFSSQVAQGMA------FLASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDI 202
Query: 406 PDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ I ++APE + +SD++S+G+LL + +G P+
Sbjct: 203 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 17/188 (9%)
Query: 277 ATELLNVRRVLINRK---MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNG 333
A + + RR +R+ I+ E+ I H N++ L +L+ E + G
Sbjct: 40 AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG 99
Query: 334 SLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDD--- 390
L D L + + L + + +G+ YLH I H D+KP N+++ D
Sbjct: 100 ELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNV 152
Query: 391 -GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAV 449
+I DFGLA + G+ + GT +VAPE + ++D++S GV+ +
Sbjct: 153 PKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 209
Query: 450 LVVGKFPF 457
L+ G PF
Sbjct: 210 LLSGASPF 217
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 262 GKMIAIKKIDQPPMA---ATELLNVRRVLINRK---MRQIKSEIITAGRIWHRNLLPLQA 315
G+ +KK + A + + RR +R+ I+ E+ I H N++ L
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 316 HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPC 375
+L+ E + G L D L + + L + + +G+ YLH
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ--- 134
Query: 376 IIHRDIKPANVLIDD----GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQT 431
I H D+KP N+++ D +I DFGLA + G+ + GT +VAPE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNY 191
Query: 432 LTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++D++S GV+ +L+ G PF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 54 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 112
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 113 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 158
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 159 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 211
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 212 GEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 262
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 322 CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDI 381
C L+V E + G L + D +G + I + + ++YLH + I HRD+
Sbjct: 87 CLLIVMECLDGGELFSRIQD--RGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDV 141
Query: 382 KPANVLIDDGMEA---RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS 438
KP N+L +++DFG AK + + +T T YVAPE +
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSC 198
Query: 439 DIYSFGVLLAVLVVGKFPF 457
D++S GV++ +L+ G PF
Sbjct: 199 DMWSLGVIMYILLCGYPPF 217
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 34/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLN-VRRVLINRKMRQ 294
D L + +G GA G V AE + I K D+P A T + ++ + +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEA-------VGIDK-DKPKEAVTVAVKMLKDDATEKDLSD 86
Query: 295 IKSEIITAGRIW-HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
+ SE+ I H+N++ L T+ ++ E+ G+L++ L + RR
Sbjct: 87 LVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEY 142
Query: 354 RYRIAR----------------GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARIS 397
Y I R +A G+EYL + CI HRD+ NVL+ + +I+
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIA 199
Query: 398 DFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
DFGLA+ + + + T ++APE + +SD++SFGVL+ + +G P
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 457 F 457
+
Sbjct: 260 Y 260
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 97 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 155
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 156 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 201
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 202 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 254
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 255 GEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 305
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 123/289 (42%), Gaps = 44/289 (15%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLIN---RKMRQIKSEIITAGRIWHRNLLPLQA 315
G +GK++ A + V+ + N ++R + SE ++ H +++ L
Sbjct: 34 GEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYG 93
Query: 316 HVTRPDCHLLVYEFMKNGSLQDILHD---VSQG-----------------RRELDWLARY 355
++ LL+ E+ K GSL+ L + V G R L
Sbjct: 94 ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLI 153
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
A ++ G++YL ++HRD+ N+L+ +G + +ISDFGL++ + + + ++ +
Sbjct: 154 SFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDFFQYTEEMNMVRWMR 474
++A E + +SD++SFGVLL ++ +G P+ + ++
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI----PPERLFNLLK 266
Query: 475 NVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
E P N EE RL+L+ C +P++RP D+
Sbjct: 267 TGHRMERPD---------NCSEEMYRLMLQ----CWKQEPDKRPVFADI 302
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%), Gaps = 34/234 (14%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+E S ++IG G+ GVVY+A++ S G+++AIKK+ Q L + R L + +
Sbjct: 56 QEVSYTDTKVIGNGSFGVVYQAKLCDS-GELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 114
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHL-LVYEFMKNGSLQDILHDVSQGRRELDW- 351
+++ ++G + + +L LV +++ ++ + S+ ++ L
Sbjct: 115 RLRYFFYSSGE-------------KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVI 160
Query: 352 ---LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPD 407
L Y++ R +A Y+H + I HRDIKP N+L+D D ++ DFG AK +
Sbjct: 161 YVKLYMYQLFRSLA----YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 213
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK--FPFD 458
G + + + Y APE T S D++S G +LA L++G+ FP D
Sbjct: 214 GEPNV---SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 264
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
E++ + ++PL V + E ++ GSL ++ + + A Y +
Sbjct: 100 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR---ALYYL 156
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLI-DDGMEARISDFGLA-KLMPDGHTRIRIT 415
+ + GLEYLH I+H D+K NVL+ DG A + DFG A L PDG + +T
Sbjct: 157 GQAL-EGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 212
Query: 416 T--VAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQ 462
+ GT ++APE K DI+S ++ ++ G P+ +F+
Sbjct: 213 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR 261
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 18/136 (13%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHM-----YHRPCIIHR 379
L+ + ++GSL D L R+ L+ R+A A GL +LH+ +P I HR
Sbjct: 83 LITHYHEHGSLYDFLQ-----RQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHR 137
Query: 380 DIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRI--TTVAGTTGYVAPEY--HQTLTIS 435
D K NVL+ ++ I+D GLA + G + I GT Y+APE Q T
Sbjct: 138 DFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDC 197
Query: 436 EKS----DIYSFGVLL 447
+S DI++FG++L
Sbjct: 198 FESYKWTDIWAFGLVL 213
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 116/255 (45%), Gaps = 25/255 (9%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 28 TNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKIS--PFE-------HQTYCQRTLREIK- 75
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
I+ A R H N++ + + P E MK+ + QD++ + L+
Sbjct: 76 -ILLAFR--HENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 127
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGIL 246
Query: 475 NVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 247 GSPSQEDLNCGINLK 261
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 123/289 (42%), Gaps = 44/289 (15%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLIN---RKMRQIKSEIITAGRIWHRNLLPLQA 315
G +GK++ A + V+ + N ++R + SE ++ H +++ L
Sbjct: 34 GEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYG 93
Query: 316 HVTRPDCHLLVYEFMKNGSLQDILHD---VSQG-----------------RRELDWLARY 355
++ LL+ E+ K GSL+ L + V G R L
Sbjct: 94 ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLI 153
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
A ++ G++YL ++HRD+ N+L+ +G + +ISDFGL++ + + + ++ +
Sbjct: 154 SFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDFFQYTEEMNMVRWMR 474
++A E + +SD++SFGVLL ++ +G P+ + ++
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI----PPERLFNLLK 266
Query: 475 NVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
E P N EE RL+L+ C +P++RP D+
Sbjct: 267 TGHRMERPD---------NCSEEMYRLMLQ----CWKQEPDKRPVFADI 302
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
E++ + ++PL V + E ++ GSL ++ + + A Y +
Sbjct: 114 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR---ALYYL 170
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLI-DDGMEARISDFGLA-KLMPDGHTRIRIT 415
+ + GLEYLH I+H D+K NVL+ DG A + DFG A L PDG + +T
Sbjct: 171 GQAL-EGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 226
Query: 416 T--VAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQ 462
+ GT ++APE K DI+S ++ ++ G P+ +F+
Sbjct: 227 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR 275
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 24/234 (10%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++L + +G GA G V +A G GK A+ K+ + +T + + L M ++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFG-LGKEDAVLKVAVKMLKSTAHADEKEAL----MSEL 100
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
K I + H N++ L T L++ E+ G D+L+ + + R L+ +
Sbjct: 101 K---IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG---DLLNFLRRKSRVLETDPAF 154
Query: 356 RIARGMASGLEYLH-----------MYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKL 404
IA S + LH + + CI HRD+ NVL+ +G A+I DFGLA+
Sbjct: 155 AIANSTLSTRDLLHFSSQVAQGMAFLASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 405 MPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ + I ++APE + +SD++S+G+LL + +G P+
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
E++ + ++PL V + E ++ GSL ++ + + A Y +
Sbjct: 116 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR---ALYYL 172
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLI-DDGMEARISDFGLA-KLMPDGHTRIRIT 415
+ + GLEYLH I+H D+K NVL+ DG A + DFG A L PDG + +T
Sbjct: 173 GQAL-EGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 228
Query: 416 T--VAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQ 462
+ GT ++APE K DI+S ++ ++ G P+ +F+
Sbjct: 229 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR 277
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 97/237 (40%), Gaps = 26/237 (10%)
Query: 227 RDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQ--PPMAATELLNVR 284
+D L ED L E IG G G V+ + ++A+K + PP + L
Sbjct: 106 KDKWVLNHED-LVLGEQIGRGNFGEVFSGRLRAD-NTLVAVKSCRETLPPDLKAKFLQEA 163
Query: 285 RVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQ 344
R+L H N++ L T+ +V E ++ G L ++
Sbjct: 164 RILKQYS---------------HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR--TE 206
Query: 345 GRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKL 404
G R L ++ A+G+EYL C IHRD+ N L+ + +ISDFG+++
Sbjct: 207 GAR-LRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSRE 262
Query: 405 MPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDF 460
DG + APE S +SD++SFG+LL +G P+ +
Sbjct: 263 EADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL 319
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 262 GKMIAIKKIDQPPMA---ATELLNVRRVLINRK---MRQIKSEIITAGRIWHRNLLPLQA 315
G+ +KK + A + + RR +R+ I+ E+ I H N++ L
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 316 HVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPC 375
+L+ E + G L D L + + L + + +G+ YLH
Sbjct: 82 VYENKTDVILIGELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ--- 134
Query: 376 IIHRDIKPANVLIDD----GMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQT 431
I H D+KP N+++ D +I DFGLA + G+ + GT +VAPE
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNY 191
Query: 432 LTISEKSDIYSFGVLLAVLVVGKFPF 457
+ ++D++S GV+ +L+ G PF
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 34/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLN-VRRVLINRKMRQ 294
D L + +G GA G V AE + I K D+P A T + ++ + +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEA-------VGIDK-DKPKEAVTVAVKMLKDDATEKDLSD 86
Query: 295 IKSEIITAGRIW-HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
+ SE+ I H+N++ L T+ ++ E+ G+L++ L + RR
Sbjct: 87 LVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEY 142
Query: 354 RYRIAR----------------GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARIS 397
Y I R +A G+EYL + CI HRD+ NVL+ + +I+
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIA 199
Query: 398 DFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
DFGLA+ + + + T ++APE + +SD++SFGVL+ + +G P
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 457 F 457
+
Sbjct: 260 Y 260
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 116/255 (45%), Gaps = 25/255 (9%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 28 TNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKIS--PFE-------HQTYCQRTLREIK- 75
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
I+ A R H N++ + + P E MK+ + QD++ + L+
Sbjct: 76 -ILLAFR--HENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 127
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGIL 246
Query: 475 NVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 247 GSPSQEDLNCIINLK 261
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 325 LVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKP 383
+V E MK G L D IL RE + + +EYLH ++HRD+KP
Sbjct: 93 VVTELMKGGELLDKILRQKFFSEREAS-----AVLFTITKTVEYLHA---QGVVHRDLKP 144
Query: 384 ANVL-IDDGMEA---RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSD 439
+N+L +D+ RI DFG AK + + + T T +VAPE + D
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLRAENGLL--MTPCYTANFVAPEVLERQGYDAACD 202
Query: 440 IYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVR 471
I+S GVLL ++ G PF + T E + R
Sbjct: 203 IWSLGVLLYTMLTGYTPFANGPDDTPEEILAR 234
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
V E++ G D+++ + Q R + A + A +A GL +L II+RD+K
Sbjct: 98 FVMEYVNGG---DLMYHIQQVGRFKEPHAVFYAAE-IAIGLFFLQ---SKGIIYRDLKLD 150
Query: 385 NVLIDDGMEARISDFGLAKL-MPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSF 443
NV++D +I+DFG+ K + DG + GT Y+APE + D ++F
Sbjct: 151 NVMLDSEGHIKIADFGMCKENIWDG---VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 207
Query: 444 GVLLAVLVVGKFPF-----DDFFQYTEEMNMV 470
GVLL ++ G+ PF D+ FQ E N+
Sbjct: 208 GVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA 239
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 123/289 (42%), Gaps = 44/289 (15%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLIN---RKMRQIKSEIITAGRIWHRNLLPLQA 315
G +GK++ A + V+ + N ++R + SE ++ H +++ L
Sbjct: 34 GEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYG 93
Query: 316 HVTRPDCHLLVYEFMKNGSLQDILHD---VSQG-----------------RRELDWLARY 355
++ LL+ E+ K GSL+ L + V G R L
Sbjct: 94 ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLI 153
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
A ++ G++YL ++HRD+ N+L+ +G + +ISDFGL++ + + + ++ +
Sbjct: 154 SFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRS 210
Query: 416 TVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDFFQYTEEMNMVRWMR 474
++A E + +SD++SFGVLL ++ +G P+ + ++
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI----PPERLFNLLK 266
Query: 475 NVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
E P N EE RL+L+ C +P++RP D+
Sbjct: 267 TGHRMERPD---------NCSEEMYRLMLQ----CWKQEPDKRPVFADI 302
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 25/255 (9%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 26 TNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 74
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 75 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 125
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGIL 244
Query: 475 NVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 245 GSPSQEDLNXIINLK 259
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 25/255 (9%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 30 TNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 78
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 79 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKCQHLSNDH 129
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGIL 248
Query: 475 NVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 249 GSPSQEDLNCIINLK 263
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 97/237 (40%), Gaps = 26/237 (10%)
Query: 227 RDIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQ--PPMAATELLNVR 284
+D L ED L E IG G G V+ + ++A+K + PP + L
Sbjct: 106 KDKWVLNHED-LVLGEQIGRGNFGEVFSGRLRAD-NTLVAVKSCRETLPPDLKAKFLQEA 163
Query: 285 RVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQ 344
R+L H N++ L T+ +V E ++ G L ++
Sbjct: 164 RILKQYS---------------HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR--TE 206
Query: 345 GRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKL 404
G R L ++ A+G+EYL C IHRD+ N L+ + +ISDFG+++
Sbjct: 207 GAR-LRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSRE 262
Query: 405 MPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPFDDF 460
DG + APE S +SD++SFG+LL +G P+ +
Sbjct: 263 EADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL 319
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 40/244 (16%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
D L + +G GA G V AE + I K D+P A T + ++L + +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEA-------VGIDK-DKPKEAVTVAV---KMLKDDATEED 83
Query: 296 KSEIITAGRIW-----HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELD 350
S++++ + H+N++ L T+ ++ E+ G+L++ L + RR
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPG 139
Query: 351 WLARYRIAR----------------GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEA 394
Y I R +A G+EYL + CI HRD+ NVL+ +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVM 196
Query: 395 RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVG 453
+I+DFGLA+ + + + T ++APE + +SD++SFGVL+ + +G
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 454 KFPF 457
P+
Sbjct: 257 GSPY 260
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 25/255 (9%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 34 TNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 82
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 83 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 133
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 134 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGIL 252
Query: 475 NVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 253 GSPSQEDLNCIINLK 267
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 25/255 (9%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 26 TNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 74
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 75 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 125
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGIL 244
Query: 475 NVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 245 GSPSQEDLNCIINLK 259
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 25/255 (9%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 31 TNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 79
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 80 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 130
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 131 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGIL 249
Query: 475 NVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 250 GSPSQEDLNCIINLK 264
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 25/255 (9%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 32 TNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 80
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 81 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 131
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 132 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGIL 250
Query: 475 NVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 251 GSPSQEDLNCIINLK 265
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 25/255 (9%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 23 TNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 71
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 72 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 122
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 123 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGIL 241
Query: 475 NVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 242 GSPSQEDLNCIINLK 256
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 25/255 (9%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 30 TNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 78
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 79 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 129
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGIL 248
Query: 475 NVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 249 GSPSQEDLNCIINLK 263
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 25/255 (9%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 26 TNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 74
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 75 LL----RFRHENIIGINDIIRAPTI-----EQMKDVYIVQDLMETDLYKLLKTQHLSNDH 125
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGIL 244
Query: 475 NVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 245 GSPSQEDLNXIINLK 259
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 35/260 (13%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 46 TNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 94
Query: 298 EIITAGRIWHRNLLPLQAHVTRP------DCHLLVYEFMKNGSLQDILHDVSQGRRELDW 351
+ R H N++ + + P D +L+ + + L +L + +
Sbjct: 95 LL----RFRHENIIGINDIIRAPTIEQMKDVYLVTH--LMGADLYKLLKTQHLSNDHICY 148
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHT 410
Y+I RG L+Y+H + ++HRD+KP+N+L++ + +I DFGLA++ PD
Sbjct: 149 FL-YQILRG----LKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 200
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNM 469
+T T Y APE KS DI+S G +LA ++ + P Y +++N
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNH 259
Query: 470 VRWMRNVISSENPHRAIDSK 489
+ + S E+ + I+ K
Sbjct: 260 ILGILGSPSQEDLNCIINLK 279
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 25/255 (9%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 30 TNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 78
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 79 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 129
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGIL 248
Query: 475 NVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 249 GSPSQEDLNCIINLK 263
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 34/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLN-VRRVLINRKMRQ 294
D L + +G GA G V AE + I K D+P A T + ++ + +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEA-------VGIDK-DKPKEAVTVAVKMLKDDATEKDLSD 86
Query: 295 IKSEIITAGRIW-HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
+ SE+ I H+N++ L T+ ++ E+ G+L++ L + RR
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEY 142
Query: 354 RYRIAR----------------GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARIS 397
Y I R +A G+EYL + CI HRD+ NVL+ + +I+
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIA 199
Query: 398 DFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
DFGLA+ + + T ++APE + +SD++SFGVL+ + +G P
Sbjct: 200 DFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 457 F 457
+
Sbjct: 260 Y 260
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 13/137 (9%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
+V E+M G L +++ + + W Y +A L H +IHRD+KP
Sbjct: 152 MVMEYMPGGDLVNLMSNYDVPEK---WAKFYTAEVVLA-----LDAIHSMGLIHRDVKPD 203
Query: 385 NVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLT----ISEKSDI 440
N+L+D +++DFG M D + T GT Y++PE ++ + D
Sbjct: 204 NMLLDKHGHLKLADFGTCMKM-DETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 262
Query: 441 YSFGVLLAVLVVGKFPF 457
+S GV L ++VG PF
Sbjct: 263 WSVGVFLFEMLVGDTPF 279
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 25/236 (10%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 24 TNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 72
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 73 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 123
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 124 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMV 470
T Y APE KS DI+S G +LA ++ + P Y +++N +
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHI 238
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 25/255 (9%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 24 TNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 72
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 73 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 123
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 124 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGIL 242
Query: 475 NVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 243 GSPSQEDLNCIINLK 257
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 25/255 (9%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 26 TNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 74
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 75 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 125
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGIL 244
Query: 475 NVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 245 GSPSQEDLNCIINLK 259
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 25/255 (9%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 28 TNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 76
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 77 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 127
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGIL 246
Query: 475 NVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 247 GSPSQEDLNCIINLK 261
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 45/235 (19%)
Query: 244 IGVGACGVVYKAEV----PGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+G GA G V+ AE P ++A+K + A RK ++E+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNA------------RKDFHREAEL 68
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHD-------VSQGR--RELD 350
+T + H +++ D ++V+E+MK+G L L +++G EL
Sbjct: 69 LT--NLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELT 126
Query: 351 WLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK------- 403
IA+ +A+G+ YL H +HRD+ N L+ + + +I DFG+++
Sbjct: 127 QSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY 183
Query: 404 LMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
GHT + I ++ PE + +SD++S GV+L + GK P+
Sbjct: 184 YRVGGHTMLPIR-------WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPW 231
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 25/236 (10%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 26 TNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 74
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 75 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 125
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMV 470
T Y APE KS DI+S G +LA ++ + P Y +++N +
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHI 240
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 25/255 (9%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 46 TNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 94
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 95 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 145
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGIL 264
Query: 475 NVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 265 GSPSQEDLNCIINLK 279
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 142/328 (43%), Gaps = 63/328 (19%)
Query: 228 DIAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIK---KIDQPPMAATELLNVR 284
D+ + ++L +++G GA G V A G ++I+ K+ + ++E R
Sbjct: 37 DLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSE----R 92
Query: 285 RVLIN--RKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDV 342
L++ + M Q+ S H N++ L T L++E+ G L + L
Sbjct: 93 EALMSELKMMTQLGS---------HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK 143
Query: 343 SQ--GRRELDWLARYRI-----------------ARGMASGLEYLHMYHRPCIIHRDIKP 383
+ E+++ + R+ A +A G+E+L + C+ HRD+
Sbjct: 144 REKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF--KSCV-HRDLAA 200
Query: 384 ANVLIDDGMEARISDFGLAK-LMPDGHTRIRITTVAGTTGYVAPE--YHQTLTISEKSDI 440
NVL+ G +I DFGLA+ +M D + +R ++APE + TI KSD+
Sbjct: 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVR-GNARLPVKWMAPESLFEGIYTI--KSDV 257
Query: 441 YSFGVLL-AVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQM 499
+S+G+LL + +G P+ + N + ++N + P A E++
Sbjct: 258 WSYGILLWEIFSLGVNPYPGI---PVDANFYKLIQNGFKMDQPFYAT----------EEI 304
Query: 500 RLVLKIAYFCTSDDPEERPSSKDVRCML 527
++++ C + D +RPS ++ L
Sbjct: 305 YIIMQS---CWAFDSRKRPSFPNLTSFL 329
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 124/314 (39%), Gaps = 53/314 (16%)
Query: 234 KEDSLAS---LEIIGVGACGVVYKAEV----PGSYGKMIAIKKIDQPPMAATELLNVRRV 286
KE SL++ +E +G G VYK + PG + +AIK +
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR------- 73
Query: 287 LINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL------- 339
+ + E + R+ H N++ L VT+ +++ + +G L + L
Sbjct: 74 ------EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHS 127
Query: 340 -----HDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEA 394
D + L+ + +A+G+EYL +H ++H+D+ NVL+ D +
Sbjct: 128 DVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNV 184
Query: 395 RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVG 453
+ISD GL + + + ++APE S SDI+S+GV+L V G
Sbjct: 185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG 244
Query: 454 KFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDD 513
P+ + ++V +RN P ++ V + C ++
Sbjct: 245 LQPYCGY----SNQDVVEMIRNRQVLPCP-------------DDCPAWVYALMIECWNEF 287
Query: 514 PEERPSSKDVRCML 527
P RP KD+ L
Sbjct: 288 PSRRPRFKDIHSRL 301
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 25/236 (10%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 30 TNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKIS--PFE-------HQTYXQRTLREIKI 78
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 79 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 129
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMV 470
T Y APE KS DI+S G +LA ++ + P Y +++N +
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHI 244
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 124/314 (39%), Gaps = 53/314 (16%)
Query: 234 KEDSLAS---LEIIGVGACGVVYKAEV----PGSYGKMIAIKKIDQPPMAATELLNVRRV 286
KE SL++ +E +G G VYK + PG + +AIK +
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR------- 56
Query: 287 LINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL------- 339
+ + E + R+ H N++ L VT+ +++ + +G L + L
Sbjct: 57 ------EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHS 110
Query: 340 -----HDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEA 394
D + L+ + +A+G+EYL +H ++H+D+ NVL+ D +
Sbjct: 111 DVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNV 167
Query: 395 RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVG 453
+ISD GL + + + ++APE S SDI+S+GV+L V G
Sbjct: 168 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG 227
Query: 454 KFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDD 513
P+ + ++V +RN P ++ V + C ++
Sbjct: 228 LQPYCGY----SNQDVVEMIRNRQVLPCP-------------DDCPAWVYALMIECWNEF 270
Query: 514 PEERPSSKDVRCML 527
P RP KD+ L
Sbjct: 271 PSRRPRFKDIHSRL 284
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 16 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 70
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 71 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 124
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 125 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 177
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ +E
Sbjct: 178 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 235
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 236 CQHLIRWCLALRPSDRP 252
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 27/225 (12%)
Query: 244 IGVGACGVVYKAEVPGSYGK----MIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+G GA G VY+ +V G +A+K + + EL + LI K+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLN------ 106
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY---R 356
H+N++ + ++ E M G L+ L + + LA
Sbjct: 107 -------HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFGLAKLMPDGHTRIR 413
+AR +A G +YL H IHRDI N L+ G A+I DFG+A+ + +
Sbjct: 160 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
++ PE + K+D +SFGVLL + +G P+
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 58 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 112
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 113 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 166
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 167 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 219
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ +E
Sbjct: 220 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 277
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 278 CQHLIRWCLALRPSDRP 294
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMA-ATELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 14 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 68
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR
Sbjct: 69 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELAR----SFF 119
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 120 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 175
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ +E
Sbjct: 176 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 233
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 234 CQHLIRWCLALRPSDRP 250
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 43 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 97
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 98 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 151
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 152 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 204
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ +E
Sbjct: 205 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 262
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 263 CQHLIRWCLALRPSDRP 279
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 92/225 (40%), Gaps = 27/225 (12%)
Query: 244 IGVGACGVVYKAEVPGSYGK----MIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+G GA G VY+ +V G +A+K + + EL + LI K+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLN------ 92
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY---R 356
H+N++ + ++ E M G L+ L + + LA
Sbjct: 93 -------HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFGLAKLMPDGHTRIR 413
+AR +A G +YL H IHRDI N L+ G A+I DFG+A+ + +
Sbjct: 146 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 202
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
++ PE + K+D +SFGVLL + +G P+
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 15 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 69
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 70 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 123
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 124 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 176
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ +E
Sbjct: 177 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 234
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 235 CQHLIRWCLALRPSDRP 251
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 43 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 97
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 98 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 151
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 152 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 204
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ +E
Sbjct: 205 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE 262
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 263 CQHLIRWCLALRPSDRP 279
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 32/234 (13%)
Query: 234 KEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMR 293
+ D L++IG GA V ++ + G++ A+K +++ ++L V R+ R
Sbjct: 59 QRDDFEILKVIGRGAFSEVAVVKMKQT-GQVYAMKIMNK-----WDMLKRGEVSCFREER 112
Query: 294 QIKSEIITAGRIWHRNLLPLQAHVTRPDCHLL--VYEFMKNGSLQDILHDVSQGRRELDW 351
+ ++ R W L H D + L V E+ G L +L G R
Sbjct: 113 DV---LVNGDRRWITQL-----HFAFQDENYLYLVMEYYVGGDLLTLLSKF--GERIPAE 162
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFG-LAKLMPDGHT 410
+AR+ +A + + + HR +HRDIKP N+L+D R++DFG KL DG
Sbjct: 163 MARFYLAEIVMA----IDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG-- 216
Query: 411 RIRITTVAGTTGYVAPEYHQTL-------TISEKSDIYSFGVLLAVLVVGKFPF 457
+R GT Y++PE Q + + + D ++ GV + G+ PF
Sbjct: 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 355 YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIR- 413
Y+I RG L+Y+H + ++HRD+KP+N+LI+ + +I DFGLA++ H
Sbjct: 151 YQILRG----LKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGF 203
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRW 472
+T T Y APE KS DI+S G +LA ++ + P Y +++N +
Sbjct: 204 LTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILG 262
Query: 473 MRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAY---FCTSD 512
+ S E+ + I+ K Y + + K+A+ F SD
Sbjct: 263 ILGSPSQEDLNCIINMK--ARNYLQSLPSKTKVAWAKLFPKSD 303
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 16 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 70
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 71 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 124
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 125 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 177
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ +E
Sbjct: 178 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 235
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 236 CQHLIRWCLALRPSDRP 252
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 44 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 98
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 99 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 152
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 153 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 205
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ +E
Sbjct: 206 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE 263
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 264 CQHLIRWCLALRPSDRP 280
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 44 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 98
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 99 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 152
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 153 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 205
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ +E
Sbjct: 206 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE 263
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 264 CQHLIRWCLALRPSDRP 280
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 34/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLN-VRRVLINRKMRQ 294
D L + +G G G V AE + I K D+P A T + ++ + +
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEA-------VGIDK-DKPKEAVTVAVKMLKDDATEKDLSD 78
Query: 295 IKSEIITAGRIW-HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
+ SE+ I H+N++ L T+ ++ E+ G+L++ L + RR
Sbjct: 79 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEY 134
Query: 354 RYRIAR----------------GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARIS 397
Y I R +A G+EYL + CI HRD+ NVL+ + +I+
Sbjct: 135 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIA 191
Query: 398 DFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
DFGLA+ + + + T ++APE + +SD++SFGVL+ + +G P
Sbjct: 192 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 251
Query: 457 F 457
+
Sbjct: 252 Y 252
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMA-ATELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 16 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 70
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 71 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 124
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 125 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 177
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ +E
Sbjct: 178 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 235
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 236 CQHLIRWCLALRPSDRP 252
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 34/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLN-VRRVLINRKMRQ 294
D L + +G G G V AE + I K D+P A T + ++ + +
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEA-------VGIDK-DKPKEAVTVAVKMLKDDATEKDLSD 75
Query: 295 IKSEIITAGRIW-HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
+ SE+ I H+N++ L T+ ++ E+ G+L++ L + RR
Sbjct: 76 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEY 131
Query: 354 RYRIAR----------------GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARIS 397
Y I R +A G+EYL + CI HRD+ NVL+ + +I+
Sbjct: 132 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIA 188
Query: 398 DFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
DFGLA+ + + + T ++APE + +SD++SFGVL+ + +G P
Sbjct: 189 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 248
Query: 457 F 457
+
Sbjct: 249 Y 249
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 33/255 (12%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMA-ATELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 11 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 65
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR
Sbjct: 66 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELAR----SFF 116
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 117 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 172
Query: 421 TGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDD---------FFQY---TEEM 467
Y PE+ + +S ++S G+LL +V G PF+ FF+ +E
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 232
Query: 468 NMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 233 HLIRWCLALRPSDRP 247
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 30 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 84
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 85 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 138
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 139 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 191
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ +E
Sbjct: 192 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 249
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 250 CQHLIRWCLALRPSDRP 266
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 24/139 (17%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHM-----YHRPCIIHR 379
L+ ++ +NGSL D L + LD + ++A SGL +LH +P I HR
Sbjct: 112 LITDYHENGSLYDYLKSTT-----LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHR 166
Query: 380 DIKPANVLIDDGMEARISDFGLA-KLMPD-GHTRIRITTVAGTTGYVAPE---------Y 428
D+K N+L+ I+D GLA K + D I T GT Y+ PE +
Sbjct: 167 DLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNH 226
Query: 429 HQTLTISEKSDIYSFGVLL 447
Q+ + +D+YSFG++L
Sbjct: 227 FQSYIM---ADMYSFGLIL 242
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 33/255 (12%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMA-ATELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 11 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 65
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR
Sbjct: 66 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELAR----SFF 116
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 117 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 172
Query: 421 TGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDD---------FFQY---TEEM 467
Y PE+ + +S ++S G+LL +V G PF+ FF+ +E
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQ 232
Query: 468 NMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 233 HLIRWCLALRPSDRP 247
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 31 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 85
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 86 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 139
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 140 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 192
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ +E
Sbjct: 193 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 250
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 251 CQHLIRWCLALRPSDRP 267
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 34/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLN-VRRVLINRKMRQ 294
D L + +G G G V AE + I K D+P A T + ++ + +
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEA-------VGIDK-DKPKEAVTVAVKMLKDDATEKDLSD 73
Query: 295 IKSEIITAGRIW-HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
+ SE+ I H+N++ L T+ ++ E+ G+L++ L + RR
Sbjct: 74 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEY 129
Query: 354 RYRIAR----------------GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARIS 397
Y I R +A G+EYL + CI HRD+ NVL+ + +I+
Sbjct: 130 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLTARNVLVTENNVMKIA 186
Query: 398 DFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
DFGLA+ + + + T ++APE + +SD++SFGVL+ + +G P
Sbjct: 187 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 246
Query: 457 F 457
+
Sbjct: 247 Y 247
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 43 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 97
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 98 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 151
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 152 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 204
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ +E
Sbjct: 205 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE 262
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 263 CQHLIRWCLALRPSDRP 279
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 244 IGVGACGVVYKAEVPGSYGK----MIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+G GA G VY+ +V G +A+K + + EL + LI K
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN------ 108
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY---R 356
H+N++ + ++ E M G L+ L + + LA
Sbjct: 109 -------HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 161
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFGLAKLMPDGHTRIR 413
+AR +A G +YL H IHRDI N L+ G A+I DFG+A+ + +
Sbjct: 162 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 218
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
++ PE + K+D +SFGVLL + +G P+
Sbjct: 219 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 263
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 244 IGVGACGVVYKAEVPGSYGK----MIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+G GA G VY+ +V G +A+K + + EL + LI K
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN------ 98
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY---R 356
H+N++ + ++ E M G L+ L + + LA
Sbjct: 99 -------HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 151
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFGLAKLMPDGHTRIR 413
+AR +A G +YL H IHRDI N L+ G A+I DFG+A+ + +
Sbjct: 152 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 208
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
++ PE + K+D +SFGVLL + +G P+
Sbjct: 209 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 253
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 114/255 (44%), Gaps = 25/255 (9%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AI+KI P + R +R+IK
Sbjct: 30 TNLSYIGEGAYGMVCSAY--DNLNKVRVAIRKIS--PFE-------HQTYCQRTLREIKI 78
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 79 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 129
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PDGHTRIRIT 415
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD +T
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 416 TVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMR 474
T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGIL 248
Query: 475 NVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 249 GSPSQEDLNCIINLK 263
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 50 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 104
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 105 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 158
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 159 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 211
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ +E
Sbjct: 212 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE 269
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 270 CQHLIRWCLALRPSDRP 286
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 244 IGVGACGVVYKAEVPGSYGK----MIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+G GA G VY+ +V G +A+K + + EL + LI K
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN------ 118
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY---R 356
H+N++ + ++ E M G L+ L + + LA
Sbjct: 119 -------HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 171
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLID---DGMEARISDFGLAKLMPDGHTRIR 413
+AR +A G +YL H IHRDI N L+ G A+I DFG+A+ + +
Sbjct: 172 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 228
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
++ PE + K+D +SFGVLL + +G P+
Sbjct: 229 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 273
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 103/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 51
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+D + + L + Y
Sbjct: 52 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSY 108
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 109 LFQ--LLQGLAFCHS-HR--VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXH 162
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 163 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 244 IGVGACGVVYKAEVPGSYGK----MIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+G GA G VY+ +V G +A+K + + EL + LI K
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN------ 92
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY---R 356
H+N++ + ++ E M G L+ L + + LA
Sbjct: 93 -------HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFGLAKLMPDGHTRIR 413
+AR +A G +YL H IHRDI N L+ G A+I DFG+A+ + +
Sbjct: 146 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 202
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
++ PE + K+D +SFGVLL + +G P+
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 244 IGVGACGVVYKAEVPGSYGK----MIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+G GA G VY+ +V G +A+K + + EL + LI K
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN------ 106
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY---R 356
H+N++ + ++ E M G L+ L + + LA
Sbjct: 107 -------HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFGLAKLMPDGHTRIR 413
+AR +A G +YL H IHRDI N L+ G A+I DFG+A+ + +
Sbjct: 160 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
++ PE + K+D +SFGVLL + +G P+
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 244 IGVGACGVVYKAEVPGSYGK----MIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+G GA G VY+ +V G +A+K + + EL + LI K
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN------ 132
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY---R 356
H+N++ + ++ E M G L+ L + + LA
Sbjct: 133 -------HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 185
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFGLAK-LMPDGHTRI 412
+AR +A G +YL H IHRDI N L+ G A+I DFG+A+ + G+ R
Sbjct: 186 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR- 241
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ ++ PE + K+D +SFGVLL + +G P+
Sbjct: 242 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 287
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 307 HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL---------------HDVSQGRRELDW 351
H+N++ L T+ ++ E+ G+L++ L H+ + D
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 352 LA-RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHT 410
++ Y++ARGM EYL + CI HRD+ NVL+ + +I+DFGLA+ +
Sbjct: 153 VSCAYQVARGM----EYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDX 205
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ T ++APE + +SD++SFGVLL + +G P+
Sbjct: 206 XKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 244 IGVGACGVVYKAEVPGSYGK----MIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+G GA G VY+ +V G +A+K + + EL + LI K
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN------ 91
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY---R 356
H+N++ + ++ E M G L+ L + + LA
Sbjct: 92 -------HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 144
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFGLAKLMPDGHTRIR 413
+AR +A G +YL H IHRDI N L+ G A+I DFG+A+ + +
Sbjct: 145 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 201
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
++ PE + K+D +SFGVLL + +G P+
Sbjct: 202 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 246
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 29/226 (12%)
Query: 244 IGVGACGVVYKAEVPGSYGK----MIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+G GA G VY+ +V G +A+K + + EL + LI K
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN------ 109
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY---R 356
H+N++ + ++ E M G L+ L + + LA
Sbjct: 110 -------HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 162
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFGLAK-LMPDGHTRI 412
+AR +A G +YL H IHRDI N L+ G A+I DFG+A+ + G+ R
Sbjct: 163 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR- 218
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ ++ PE + K+D +SFGVLL + +G P+
Sbjct: 219 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 264
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 116/256 (45%), Gaps = 27/256 (10%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 30 TNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 78
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 79 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 129
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PD-GHTRIRI 414
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD HT
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 189
Query: 415 TTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWM 473
VA T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 190 EXVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGI 247
Query: 474 RNVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 248 LGSPSQEDLNCIINLK 263
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 116/256 (45%), Gaps = 27/256 (10%)
Query: 239 ASLEIIGVGACGVVYKAEVPGSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKS 297
+L IG GA G+V A + K+ +AIKKI P + R +R+IK
Sbjct: 31 TNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKIS--PFE-------HQTYCQRTLREIKI 79
Query: 298 EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYR 356
+ R H N++ + + P E MK+ + QD++ + L+
Sbjct: 80 LL----RFRHENIIGINDIIRAP-----TIEQMKDVYIVQDLMETDLYKLLKTQHLSNDH 130
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM-PD-GHTRIRI 414
I + L L H ++HRD+KP+N+L++ + +I DFGLA++ PD HT
Sbjct: 131 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 190
Query: 415 TTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWM 473
VA T Y APE KS DI+S G +LA ++ + P Y +++N + +
Sbjct: 191 EXVA-TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGI 248
Query: 474 RNVISSENPHRAIDSK 489
S E+ + I+ K
Sbjct: 249 LGSPSQEDLNCIINLK 264
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 244 IGVGACGVVYKAEVPGSYGK----MIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+G GA G VY+ +V G +A+K + + EL + LI K
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN------ 91
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY---R 356
H+N++ + ++ E M G L+ L + + LA
Sbjct: 92 -------HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 144
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFGLAKLMPDGHTRIR 413
+AR +A G +YL H IHRDI N L+ G A+I DFG+A+ + +
Sbjct: 145 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 201
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
++ PE + K+D +SFGVLL + +G P+
Sbjct: 202 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 246
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 244 IGVGACGVVYKAEVPGSYGK----MIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+G GA G VY+ +V G +A+K + + EL + LI K
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN------ 92
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY---R 356
H+N++ + ++ E M G L+ L + + LA
Sbjct: 93 -------HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFGLAKLMPDGHTRIR 413
+AR +A G +YL H IHRDI N L+ G A+I DFG+A+ + +
Sbjct: 146 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRK 202
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
++ PE + K+D +SFGVLL + +G P+
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 114/255 (44%), Gaps = 33/255 (12%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMA-ATELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 11 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 65
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR
Sbjct: 66 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELAR----SFF 116
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 117 WQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 172
Query: 421 TGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDD---------FFQY---TEEM 467
Y PE+ + +S ++S G+LL +V G PF+ FF+ E
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQ 232
Query: 468 NMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 233 HLIRWCLALRPSDRP 247
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 53
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ + L+D + + L + Y
Sbjct: 54 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSY 110
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 111 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXH 164
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 165 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 209
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 244 IGVGACGVVYKAEVPGSYGK----MIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+G GA G VY+ +V G +A+K + + EL + LI K
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN------ 83
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY---R 356
H+N++ + ++ E M G L+ L + + LA
Sbjct: 84 -------HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 136
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFGLAKLMPDGHTRIR 413
+AR +A G +YL H IHRDI N L+ G A+I DFG+A+ + +
Sbjct: 137 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 193
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
++ PE + K+D +SFGVLL + +G P+
Sbjct: 194 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 44 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 98
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 99 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 152
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 153 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 205
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ E
Sbjct: 206 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXE 263
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 264 CQHLIRWCLALRPSDRP 280
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 34/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLN-VRRVLINRKMRQ 294
D L + +G GA G V AE + I K D+P A T + ++ + +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEA-------VGIDK-DKPKEAVTVAVKMLKDDATEKDLSD 86
Query: 295 IKSEIITAGRIW-HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
+ SE+ I H+N++ L T+ ++ + G+L++ L + RR
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYL----RARRPPGMEY 142
Query: 354 RYRIAR----------------GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARIS 397
Y I R +A G+EYL + CI HRD+ NVL+ + +I+
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIA 199
Query: 398 DFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
DFGLA+ + + + T ++APE + +SD++SFGVL+ + +G P
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 457 F 457
+
Sbjct: 260 Y 260
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 51
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 52 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 108
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ G T
Sbjct: 109 LFQ--LLQGLSFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 161
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 307 HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIAR------- 359
H+N++ L T+ ++ E+ G+L++ L + RR Y I R
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEYSYDINRVPEEQMT 201
Query: 360 ---------GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHT 410
+A G+EYL + CI HRD+ NVL+ + +I+DFGLA+ + +
Sbjct: 202 FKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDY 258
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ T ++APE + +SD++SFGVL+ + +G P+
Sbjct: 259 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 20/227 (8%)
Query: 235 EDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQ 294
ED E+IG G VV + + G+ A+K +D ++ L+
Sbjct: 23 EDVYELCEVIGKGPFSVVRRC-INRETGQQFAVKIVDVAKFTSSPGLSTE---------D 72
Query: 295 IKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQ-DILHDVSQGRRELDWLA 353
+K E + H +++ L + +V+EFM L +I+ G + +A
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 354 RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFGLAKLMPDGHT 410
+ M LE L H IIHRD+KP VL+ ++ ++ FG+A + G +
Sbjct: 133 SHY----MRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GES 186
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ GT ++APE + + D++ GV+L +L+ G PF
Sbjct: 187 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 104/231 (45%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 54
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ + L+D + + L + Y
Sbjct: 55 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSY 111
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 112 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXH 165
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 166 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 210
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 43 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 97
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 98 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 151
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 152 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 204
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ E
Sbjct: 205 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXE 262
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 263 CQHLIRWCLALRPSDRP 279
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 31 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 85
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 86 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 139
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 140 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 192
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ E
Sbjct: 193 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE 250
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 251 CQHLIRWCLALRPSDRP 267
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 58 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 112
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 113 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 166
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 167 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 219
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ E
Sbjct: 220 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE 277
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 278 CQHLIRWCLALRPSDRP 294
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 103/235 (43%), Gaps = 34/235 (14%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
L ++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR-- 55
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDW 351
EI + H N++ L + + LV+EF+ L+ + + L
Sbjct: 56 ------EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPL 108
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTR 411
+ Y + GL + H HR ++HRD+KP N+LI+ +++DFGLA+ G
Sbjct: 109 IKSYLFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPV 161
Query: 412 IRITTVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
T T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 162 RTYTHEVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 211
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 30 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 84
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 85 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 138
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 139 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 191
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ E
Sbjct: 192 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE 249
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 250 CQHLIRWCLALRPSDRP 266
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 44 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 98
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 99 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 152
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 153 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 205
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ E
Sbjct: 206 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXE 263
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 264 CQHLIRWCLALRPSDRP 280
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 52
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 53 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 109
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ G T
Sbjct: 110 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 162
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 163 HEVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 208
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 50
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 51 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 107
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ G T
Sbjct: 108 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 160
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 206
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 27/225 (12%)
Query: 244 IGVGACGVVYKAEVPGSYGK----MIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
+G GA G VY+ +V G +A+K + + EL + LI K
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFN------ 106
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY---R 356
H+N++ + ++ E M G L+ L + + LA
Sbjct: 107 -------HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFGLAKLMPDGHTRIR 413
+AR +A G +YL H IHRDI N L+ G A+I DFG+A+ + +
Sbjct: 160 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRK 216
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
++ PE + K+D +SFGVLL + +G P+
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 58
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 59 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 115
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ G T
Sbjct: 116 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 168
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 169 HEVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 214
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 34/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLN-VRRVLINRKMRQ 294
D L + +G GA G V AE + I K D+P A T + ++ + +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEA-------VGIDK-DKPKEAVTVAVKMLKDDATEKDLSD 86
Query: 295 IKSEIITAGRIW-HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLA 353
+ SE+ I H+N++ L T+ ++ + G+L++ L + RR
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYL----RARRPPGMEY 142
Query: 354 RYRIAR----------------GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARIS 397
Y I R +A G+EYL + CI HRD+ NVL+ + +I+
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLA--SQKCI-HRDLAARNVLVTENNVMKIA 199
Query: 398 DFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
DFGLA+ + + + T ++APE + +SD++SFGVL+ + +G P
Sbjct: 200 DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
Query: 457 F 457
+
Sbjct: 260 Y 260
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 307 HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL---------------HDVSQGRRELDW 351
H+N++ L T+ ++ E+ G+L++ L H+ + D
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 352 LA-RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHT 410
++ Y++ARGM EYL + CI HRD+ NVL+ + +I+DFGLA+ +
Sbjct: 153 VSCAYQVARGM----EYLA--SKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 205
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ T ++APE + +SD++SFGVLL + +G P+
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMA-ATELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 38 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 92
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 93 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 146
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 147 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 199
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ E
Sbjct: 200 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE 257
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 258 CQHLIRWCLALRPSDRP 274
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 51
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 52 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 108
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ G T
Sbjct: 109 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 161
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 50
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 51 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 107
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ G T
Sbjct: 108 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 160
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 206
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 63 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 117
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 118 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 171
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 172 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 224
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ E
Sbjct: 225 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE 282
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + S+ P
Sbjct: 283 CQHLIRWCLALRPSDRP 299
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 51
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 52 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 108
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ G T
Sbjct: 109 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 161
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 20/227 (8%)
Query: 235 EDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQ 294
ED E+IG G VV + + G+ A+K +D ++ L+
Sbjct: 25 EDVYELCEVIGKGPFSVVRRC-INRETGQQFAVKIVDVAKFTSSPGLSTE---------D 74
Query: 295 IKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQ-DILHDVSQGRRELDWLA 353
+K E + H +++ L + +V+EFM L +I+ G + +A
Sbjct: 75 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 134
Query: 354 RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLI---DDGMEARISDFGLAKLMPDGHT 410
+ M LE L H IIHRD+KP VL+ ++ ++ FG+A + G +
Sbjct: 135 SHY----MRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GES 188
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ GT ++APE + + D++ GV+L +L+ G PF
Sbjct: 189 GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 307 HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL---------------HDVSQGRRELDW 351
H+N++ L T+ ++ E+ G+L++ L H+ + D
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 352 LA-RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHT 410
++ Y++ARGM EYL + CI HRD+ NVL+ + +I+DFGLA+ +
Sbjct: 146 VSCAYQVARGM----EYLA--SKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 198
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ T ++APE + +SD++SFGVLL + +G P+
Sbjct: 199 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 246
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 51
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 52 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 108
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ G T
Sbjct: 109 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 161
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 162 HEVVTLWYRAPEILLGXKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 307 HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL---------------HDVSQGRRELDW 351
H+N++ L T+ ++ E+ G+L++ L H+ + D
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 352 LA-RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHT 410
++ Y++ARGM EYL + CI HRD+ NVL+ + +I+DFGLA+ +
Sbjct: 153 VSCAYQVARGM----EYLA--SKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 205
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ T ++APE + +SD++SFGVLL + +G P+
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 58
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 59 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 115
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ G T
Sbjct: 116 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 168
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 169 HEVVTLWYRAPEILLGXKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 214
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 307 HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL---------------HDVSQGRRELDW 351
H+N++ L T+ ++ E+ G+L++ L H+ + D
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 352 LA-RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHT 410
++ Y++ARGM EYL + CI HRD+ NVL+ + +I+DFGLA+ +
Sbjct: 145 VSCAYQVARGM----EYLA--SKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 197
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ T ++APE + +SD++SFGVLL + +G P+
Sbjct: 198 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 245
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 307 HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL---------------HDVSQGRRELDW 351
H+N++ L T+ ++ E+ G+L++ L H+ + D
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 352 LA-RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHT 410
++ Y++ARGM EYL + CI HRD+ NVL+ + +I+DFGLA+ +
Sbjct: 142 VSCAYQVARGM----EYLA--SKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 194
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ T ++APE + +SD++SFGVLL + +G P+
Sbjct: 195 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 34/240 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
D L + +G GA G V +A+ G I K A ++L + + + R +
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFG-------IDKTATCRTVAVKML--KEGATHSEHRAL 78
Query: 296 KSEIITAGRIWHR-NLLPLQAHVTRPDCHLLV-YEFMKNGSLQDIL-------------H 340
SE+ I H N++ L T+P L+V EF K G+L L
Sbjct: 79 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPE 138
Query: 341 DVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFG 400
D+ + L+ L Y +A G+E+L R CI HRD+ N+L+ + +I DFG
Sbjct: 139 DLYKDFLTLEHLICYSFQ--VAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFG 193
Query: 401 LAKLMPDGHTRIRITTVAGTTGYVAPE--YHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
LA+ + +R ++APE + + TI +SD++SFGVLL + +G P+
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPY 251
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 111/245 (45%), Gaps = 43/245 (17%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPG----SYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
D L + +G GA G V +A+ G + + +A+K + + AT + +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GAT----------HSE 73
Query: 292 MRQIKSEIITAGRIWHR-NLLPLQAHVTRPDCHLLV-YEFMKNGSLQDIL---------- 339
R + SE+ I H N++ L T+P L+V EF K G+L L
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 340 ----HDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEAR 395
D+ + L+ L Y +A G+E+L R CI HRD+ N+L+ + +
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQ--VAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVK 188
Query: 396 ISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE--YHQTLTISEKSDIYSFGVLL-AVLVV 452
I DFGLA+ + +R ++APE + + TI +SD++SFGVLL + +
Sbjct: 189 ICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSL 246
Query: 453 GKFPF 457
G P+
Sbjct: 247 GASPY 251
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 307 HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL---------------HDVSQGRRELDW 351
H+N++ L T+ ++ E+ G+L++ L H+ + D
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 352 LA-RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHT 410
++ Y++ARGM EYL + CI HRD+ NVL+ + +I+DFGLA+ +
Sbjct: 138 VSCAYQVARGM----EYLA--SKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 190
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ T ++APE + +SD++SFGVLL + +G P+
Sbjct: 191 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 35/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
D L + +G GA G V +A+ G I K A ++L + + + R +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFG-------IDKTATCRTVAVKML--KEGATHSEHRAL 68
Query: 296 KSEIITAGRIWHR-NLLPLQAHVTRPDCHLLVY-EFMKNGSLQDILH------------- 340
SE+ I H N++ L T+P L+V EF K G+L L
Sbjct: 69 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAP 128
Query: 341 -DVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDF 399
D+ + L+ L Y +A G+E+L R CI HRD+ N+L+ + +I DF
Sbjct: 129 EDLYKDFLTLEHLICYSFQ--VAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDF 183
Query: 400 GLAKLMPDGHTRIRITTVAGTTGYVAPE--YHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
GLA+ + +R ++APE + + TI +SD++SFGVLL + +G P
Sbjct: 184 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASP 241
Query: 457 F 457
+
Sbjct: 242 Y 242
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 307 HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL---------------HDVSQGRRELDW 351
H+N++ L T+ ++ E+ G+L++ L H+ + D
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 352 LA-RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHT 410
++ Y++ARGM EYL + CI HRD+ NVL+ + +I+DFGLA+ +
Sbjct: 153 VSCAYQVARGM----EYLA--SKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 205
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ T ++APE + +SD++SFGVLL + +G P+
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 35/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
D L + +G GA G V +A+ G I K A ++L + + + R +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFG-------IDKTATCRTVAVKML--KEGATHSEHRAL 68
Query: 296 KSEIITAGRIWHR-NLLPLQAHVTRPDCHLLV-YEFMKNGSLQDILH------------- 340
SE+ I H N++ L T+P L+V EF K G+L L
Sbjct: 69 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 128
Query: 341 -DVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDF 399
D+ + L+ L Y +A G+E+L R CI HRD+ N+L+ + +I DF
Sbjct: 129 EDLYKDFLTLEHLICYSFQ--VAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDF 183
Query: 400 GLAKLMPDGHTRIRITTVAGTTGYVAPE--YHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
GLA+ + +R ++APE + + TI +SD++SFGVLL + +G P
Sbjct: 184 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASP 241
Query: 457 F 457
+
Sbjct: 242 Y 242
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 307 HRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL---------------HDVSQGRRELDW 351
H+N++ L T+ ++ E+ G+L++ L H+ + D
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 352 LA-RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHT 410
++ Y++ARGM EYL + CI HRD+ NVL+ + +I+DFGLA+ +
Sbjct: 194 VSCAYQVARGM----EYLA--SKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 246
Query: 411 RIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ T ++APE + +SD++SFGVLL + +G P+
Sbjct: 247 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 294
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 98/235 (41%), Gaps = 33/235 (14%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
E IGVG+ V + + + A+K ID+ TE + + ++
Sbjct: 28 EDIGVGSYSVCKRC-IHKATNXEFAVKIIDKSKRDPTEEIEI---------------LLR 71
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQD-ILHDVSQGRRELDWLARYRIARG 360
G+ H N++ L+ +V E K G L D IL RE +
Sbjct: 72 YGQ--HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREAS-----AVLFT 124
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVL-IDDGMEA---RISDFGLAKLMPDGHTRIRITT 416
+ +EYLH ++HRD+KP+N+L +D+ RI DFG AK + + + T
Sbjct: 125 ITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL--XT 179
Query: 417 VAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVR 471
T +VAPE + DI+S GVLL + G PF + T E + R
Sbjct: 180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILAR 234
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 39/235 (16%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
+I+G GA V++ + G + AIK + + +R + +K+
Sbjct: 15 DILGQGATANVFRGRHKKT-GDLFAIKVFNNISFLRPVDVQMREFEVLKKLN-------- 65
Query: 302 AGRIWHRNLLPLQA--HVTRPDCHLLVYEFMKNGSLQDILHDVSQ--GRRELDWLARYRI 357
H+N++ L A T +L+ EF GSL +L + S G E ++L +
Sbjct: 66 -----HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI---V 117
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPAN---VLIDDGMEA-RISDFGLAKLMPDGHTRIR 413
R + G+ +L I+HR+IKP N V+ +DG +++DFG A+ + D +
Sbjct: 118 LRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---Q 171
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKS--------DIYSFGVLLAVLVVGKFPFDDF 460
++ GT Y+ P+ ++ + + D++S GV G PF F
Sbjct: 172 FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 35/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
D L + +G GA G V +A+ G I K A ++L + + + R +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFG-------IDKTATCRTVAVKML--KEGATHSEHRAL 77
Query: 296 KSEIITAGRIWHR-NLLPLQAHVTRPDCHLLV-YEFMKNGSLQDIL-------------- 339
SE+ I H N++ L T+P L+V EF K G+L L
Sbjct: 78 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 137
Query: 340 HDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDF 399
D+ + L+ L Y +A G+E+L R CI HRD+ N+L+ + +I DF
Sbjct: 138 EDLYKDFLTLEHLICYSFQ--VAKGMEFLA--SRKCI-HRDLAARNILLSEKNVVKICDF 192
Query: 400 GLAKLMPDGHTRIRITTVAGTTGYVAPE--YHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
GLA+ + +R ++APE + + TI +SD++SFGVLL + +G P
Sbjct: 193 GLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASP 250
Query: 457 F 457
+
Sbjct: 251 Y 251
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 295 IKSEIITAGRIWHRNLLPLQAHVTRPDCH--LLVYEFMKNGSLQDILHDVSQGRRELDWL 352
+K EI ++H N++ + T + L+ EF+ +GSL++ L + + +++
Sbjct: 70 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLK 126
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ + A + G++YL +HRD+ NVL++ + +I DFGL K + T
Sbjct: 127 QQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI---ETDK 180
Query: 413 RITTVA----GTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV 452
TV + APE SD++SFGV L L+
Sbjct: 181 EXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 33/239 (13%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
D L + +G GA G V +A+ G I K A ++L + + + R +
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFG-------IDKTATXRTVAVKML--KEGATHSEHRAL 79
Query: 296 KSEIITAGRIWHR-NLLPLQAHVTRPDCHLLV-YEFMKNGSLQDIL------------HD 341
SE+ I H N++ L T+P L+V EF K G+L L D
Sbjct: 80 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPED 139
Query: 342 VSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGL 401
+ + L+ L Y +A G+E+L IHRD+ N+L+ + +I DFGL
Sbjct: 140 LYKDFLTLEHLIXYSFQ--VAKGMEFLASRK---XIHRDLAARNILLSEKNVVKICDFGL 194
Query: 402 AKLMPDGHTRIRITTVAGTTGYVAPE--YHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
A+ + +R ++APE + + TI +SD++SFGVLL + +G P+
Sbjct: 195 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPY 251
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 28/180 (15%)
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
RPD +L+ E + +QD+ +++ + LAR LE + H ++H
Sbjct: 127 RPDSFVLILE--RPEPVQDLFDFITERGALQEELAR----SFFWQVLEAVRHCHNCGVLH 180
Query: 379 RDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPE---YHQTLTI 434
RDIK N+LID + E ++ DFG L+ D T GT Y PE YH+
Sbjct: 181 RDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRYHRYHGR 236
Query: 435 SEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TEEMNMVRWMRNVISSENP 482
S + ++S G+LL +V G PF+ FF+ +E +++RW + S+ P
Sbjct: 237 S--AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRP 294
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 35/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
D L + +G GA G V +A+ G I K A ++L + + + R +
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFG-------IDKTATCRTVAVKML--KEGATHSEHRAL 79
Query: 296 KSEIITAGRIWHR-NLLPLQAHVTRPDCHLLV-YEFMKNGSLQDIL-------------- 339
SE+ I H N++ L T+P L+V EF K G+L L
Sbjct: 80 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAP 139
Query: 340 HDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDF 399
D+ + L+ L Y +A G+E+L R CI HRD+ N+L+ + +I DF
Sbjct: 140 EDLYKDFLTLEHLICYSFQ--VAKGMEFLA--SRKCI-HRDLAARNILLSEKNVVKICDF 194
Query: 400 GLAKLMPDGHTRIRITTVAGTTGYVAPE--YHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
GLA+ + +R ++APE + + TI +SD++SFGVLL + +G P
Sbjct: 195 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASP 252
Query: 457 F 457
+
Sbjct: 253 Y 253
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 35/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
D L + +G GA G V +A+ G I K A ++L + + + R +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFG-------IDKTATCRTVAVKML--KEGATHSEHRAL 68
Query: 296 KSEIITAGRIWHR-NLLPLQAHVTRPDCHLLVY-EFMKNGSLQDIL-------------- 339
SE+ I H N++ L T+P L+V EF K G+L L
Sbjct: 69 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAP 128
Query: 340 HDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDF 399
D+ + L+ L Y +A G+E+L R CI HRD+ N+L+ + +I DF
Sbjct: 129 EDLYKDFLTLEHLICYSFQ--VAKGMEFLA--SRKCI-HRDLAARNILLSEKNVVKICDF 183
Query: 400 GLAKLMPDGHTRIRITTVAGTTGYVAPE--YHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
GLA+ + +R ++APE + + TI +SD++SFGVLL + +G P
Sbjct: 184 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASP 241
Query: 457 F 457
+
Sbjct: 242 Y 242
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 35/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
D L + +G GA G V +A+ G I K A ++L + + + R +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFG-------IDKTATCRTVAVKML--KEGATHSEHRAL 77
Query: 296 KSEIITAGRIWHR-NLLPLQAHVTRPDCHLLV-YEFMKNGSLQDIL-------------- 339
SE+ I H N++ L T+P L+V EF K G+L L
Sbjct: 78 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 137
Query: 340 HDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDF 399
D+ + L+ L Y +A G+E+L R CI HRD+ N+L+ + +I DF
Sbjct: 138 EDLYKDFLTLEHLICYSFQ--VAKGMEFLA--SRKCI-HRDLAARNILLSEKNVVKICDF 192
Query: 400 GLAKLMPDGHTRIRITTVAGTTGYVAPE--YHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
GLA+ + +R ++APE + + TI +SD++SFGVLL + +G P
Sbjct: 193 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASP 250
Query: 457 F 457
+
Sbjct: 251 Y 251
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 295 IKSEIITAGRIWHRNLLPLQAHVTRPDCH--LLVYEFMKNGSLQDILHDVSQGRRELDWL 352
+K EI ++H N++ + T + L+ EF+ +GSL++ L + + +++
Sbjct: 58 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLK 114
Query: 353 ARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRI 412
+ + A + G++YL +HRD+ NVL++ + +I DFGL K + T
Sbjct: 115 QQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI---ETDK 168
Query: 413 RITTVA----GTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVV 452
TV + APE SD++SFGV L L+
Sbjct: 169 EXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 124/301 (41%), Gaps = 56/301 (18%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMI--AIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
+IG G GVVY E I AIK + + TE+ V L + ++
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSR----ITEMQQVEAFL--------REGLL 75
Query: 301 TAGRIWHRNLLPLQAHVTRPD--CHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIA 358
G + H N+L L + P+ H+L+ +M +G L + + D ++
Sbjct: 76 MRG-LNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDLIS---FG 130
Query: 359 RGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD---------GH 409
+A G+EYL +HRD+ N ++D+ +++DFGLA+ + D H
Sbjct: 131 LQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRH 187
Query: 410 TRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNM 469
R+ + + A E QT + KSD++SFGVLL L+ P +++ + ++
Sbjct: 188 ARLPVK-------WTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP---PYRHIDPFDL 237
Query: 470 VRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCMLSQ 529
++ P DS + ++ C DP RP+ + + + Q
Sbjct: 238 THFLAQGRRLPQPEYCPDS-------------LYQVMQQCWEADPAVRPTFRVLVGEVEQ 284
Query: 530 I 530
I
Sbjct: 285 I 285
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 35/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
D L + +G GA G V +A+ G I K A ++L + + + R +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFG-------IDKTATCRTVAVKML--KEGATHSEHRAL 68
Query: 296 KSEIITAGRIWHR-NLLPLQAHVTRPDCHLLVY-EFMKNGSLQDIL-------------- 339
SE+ I H N++ L T+P L+V EF K G+L L
Sbjct: 69 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAP 128
Query: 340 HDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDF 399
D+ + L+ L Y +A G+E+L R CI HRD+ N+L+ + +I DF
Sbjct: 129 EDLYKDFLTLEHLICYSFQ--VAKGMEFLA--SRKCI-HRDLAARNILLSEKNVVKICDF 183
Query: 400 GLAKLMPDGHTRIRITTVAGTTGYVAPE--YHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
GLA+ + +R ++APE + + TI +SD++SFGVLL + +G P
Sbjct: 184 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASP 241
Query: 457 F 457
+
Sbjct: 242 Y 242
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 35/241 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
D L + +G GA G V +A+ G I K A ++L + + + R +
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFG-------IDKTATCRTVAVKML--KEGATHSEHRAL 114
Query: 296 KSEIITAGRIWHR-NLLPLQAHVTRPDCHLLV-YEFMKNGSLQDIL-------------- 339
SE+ I H N++ L T+P L+V EF K G+L L
Sbjct: 115 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 174
Query: 340 HDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDF 399
D+ + L+ L Y +A G+E+L R CI HRD+ N+L+ + +I DF
Sbjct: 175 EDLYKDFLTLEHLICYSFQ--VAKGMEFLA--SRKCI-HRDLAARNILLSEKNVVKICDF 229
Query: 400 GLAKLMPDGHTRIRITTVAGTTGYVAPE--YHQTLTISEKSDIYSFGVLL-AVLVVGKFP 456
GLA+ + +R ++APE + + TI +SD++SFGVLL + +G P
Sbjct: 230 GLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASP 287
Query: 457 F 457
+
Sbjct: 288 Y 288
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 355 YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRI 414
+++ARGM E+L R CI HRD+ N+L+ + +I DFGLA+ + +R
Sbjct: 206 FQVARGM----EFLS--SRKCI-HRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK 258
Query: 415 TTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
++APE S KSD++S+GVLL + +G P+
Sbjct: 259 GDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPY 302
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 106/239 (44%), Gaps = 32/239 (13%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++L + +G GA G V +A G GK A+ K+ + +T + + L M ++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFG-LGKEDAVLKVAVKMLKSTAHADEKEAL----MSEL 100
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL---------------H 340
K I + H N++ L T L++ E+ G L + L H
Sbjct: 101 K---IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSH 157
Query: 341 DVSQGRRELDWLA-RYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDF 399
+ + D L ++A+GMA + + CI HRD+ NVL+ +G A+I DF
Sbjct: 158 NPEEQLSSRDLLHFSSQVAQGMA------FLASKNCI-HRDVAARNVLLTNGHVAKIGDF 210
Query: 400 GLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
GLA+ + + I ++APE + +SD++S+G+LL + +G P+
Sbjct: 211 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 115/257 (44%), Gaps = 37/257 (14%)
Query: 243 IIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAA-TELLNVRRVLINRKMRQIKSEIIT 301
++G G G VY + S +AIK +++ ++ EL N RV M + + ++
Sbjct: 31 LLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVS 85
Query: 302 AGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGM 361
+G ++ L RPD +L+ E + +QD+ +++ + LAR +
Sbjct: 86 SG---FSGVIRLLDWFERPDSFVLILE--RPEPVQDLFDFITERGALQEELARSFFWQV- 139
Query: 362 ASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
LE + H ++HRDIK N+LID + E ++ DFG L+ D T GT
Sbjct: 140 ---LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGT 192
Query: 421 TGYVAPE---YHQTLTISEKSDIYSFGVLLAVLVVGKFPFDD---------FFQY---TE 465
Y PE YH+ S + ++S G+LL +V G PF+ FF+ E
Sbjct: 193 RVYSPPEWIRYHRYHGRS--AAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE 250
Query: 466 EMNMVRWMRNVISSENP 482
+++RW + + P
Sbjct: 251 CQHLIRWCLALRPXDRP 267
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKI----DQPPMAATELLNVRRVLINRKMRQIKSEI 299
IG G+ GVV+K + G+++AIKK D P + L +R ++Q+K
Sbjct: 11 IGEGSYGVVFKCRNRDT-GQIVAIKKFLESEDDPVIKKIALREIRM------LKQLK--- 60
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIAR 359
H NL+ L R LV+E+ + +LH++ + +R + + +
Sbjct: 61 -------HPNLVNLLEVFRRKRRLHLVFEYCDHT----VLHELDRYQRGV---PEHLVKS 106
Query: 360 GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAG 419
L+ ++ H+ IHRD+KP N+LI ++ DFG A+L+ G + VA
Sbjct: 107 ITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEVA- 164
Query: 420 TTGYVAPEYHQTLT-ISEKSDIYSFGVLLAVLVVG 453
T Y +PE T D+++ G + A L+ G
Sbjct: 165 TRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 51
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 52 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 108
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 109 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXH 162
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 163 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
L+ +G G VYKA + +++AIKKI L R + R EI
Sbjct: 15 LDFLGEGQFATVYKARDKNT-NQIVAIKKIK---------LGHRSEAKDGINRTALREIK 64
Query: 301 TAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
+ H N++ L LV++FM+ L+ I+ D S L I
Sbjct: 65 LLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSL------VLTPSHIKAY 117
Query: 361 MA---SGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTV 417
M GLEYLH + I+HRD+KP N+L+D+ +++DFGLAK + V
Sbjct: 118 MLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV 174
Query: 418 AGTTGYVAPE-YHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
T Y APE D+++ G +LA L++ + PF
Sbjct: 175 --TRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPF 212
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 53
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 54 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 110
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 111 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXH 164
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 165 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 209
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 51
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 52 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 108
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 109 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXH 162
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 163 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 51
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 52 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 108
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 109 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXH 162
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 163 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 53
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 54 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 110
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 111 LFQ--LLQGLAFCHS-HR--VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXH 164
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 165 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 209
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 52
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 53 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 109
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 110 LFQ--LLQGLAFCHS-HR--VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXH 163
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 164 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 208
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 50
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 51 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 107
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 108 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXH 161
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 162 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 206
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 50
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 51 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 107
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 108 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXH 161
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 162 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 206
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 54
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 55 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 111
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 112 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXH 165
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 166 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 53
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 54 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 110
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 111 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXH 164
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 165 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 209
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 51
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 52 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 108
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 109 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXH 162
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 163 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 54
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 55 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 111
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 112 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXH 165
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 166 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 210
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 31/237 (13%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
D L + +G GA G V +A+ G I K A ++L + + + R +
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFG-------IDKTATXRTVAVKML--KEGATHSEHRAL 77
Query: 296 KSEIITAGRIWHR-NLLPLQAHVTRPDCHLLV-YEFMKNGSLQDILH----------DVS 343
SE+ I H N++ L T+P L+V EF K G+L L D+
Sbjct: 78 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLY 137
Query: 344 QGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK 403
+ L+ L Y +A G+E+L IHRD+ N+L+ + +I DFGLA+
Sbjct: 138 KDFLTLEHLIXYSFQ--VAKGMEFLASRK---XIHRDLAARNILLSEKNVVKIXDFGLAR 192
Query: 404 LMPDGHTRIRITTVAGTTGYVAPE--YHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ +R ++APE + + TI +SD++SFGVLL + +G P+
Sbjct: 193 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPY 247
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 39/235 (16%)
Query: 242 EIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIIT 301
+I+G GA V++ + G + AIK + + +R + +K+
Sbjct: 15 DILGQGATANVFRGRHKKT-GDLFAIKVFNNISFLRPVDVQMREFEVLKKLN-------- 65
Query: 302 AGRIWHRNLLPLQA--HVTRPDCHLLVYEFMKNGSLQDILHDVSQ--GRRELDWLARYRI 357
H+N++ L A T +L+ EF GSL +L + S G E ++L +
Sbjct: 66 -----HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI---V 117
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPAN---VLIDDGMEA-RISDFGLAKLMPDGHTRIR 413
R + G+ +L I+HR+IKP N V+ +DG +++DFG A+ + D +
Sbjct: 118 LRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---Q 171
Query: 414 ITTVAGTTGYVAPEYHQTLTISEKS--------DIYSFGVLLAVLVVGKFPFDDF 460
+ GT Y+ P+ ++ + + D++S GV G PF F
Sbjct: 172 FVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 52
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 53 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 109
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 110 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXH 163
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 164 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 208
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 55
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 56 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 112
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 113 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXH 166
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 167 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 211
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 32/173 (18%)
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTV--- 417
+A +E+LH ++HRD+KP+N+ ++ DFGL M + T
Sbjct: 173 IAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229
Query: 418 -------AGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMV 470
GT Y++PE S K DI+S G++L F+ + ++ +M V
Sbjct: 230 YATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLIL---------FELLYSFSTQMERV 280
Query: 471 RWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
R + +V + + P L Y ++ +V + S P ERP + D+
Sbjct: 281 RIITDVRNLKFP------LLFTQKYPQEHMMVQDM----LSPSPTERPEATDI 323
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 20/124 (16%)
Query: 335 LQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEA 394
L+D+LH SQ +A+GMA + + CI HRD+ NVL+ +G A
Sbjct: 157 LRDLLHFSSQ------------VAQGMA------FLASKNCI-HRDVAARNVLLTNGHVA 197
Query: 395 RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL-AVLVVG 453
+I DFGLA+ + + I ++APE + +SD++S+G+LL + +G
Sbjct: 198 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 257
Query: 454 KFPF 457
P+
Sbjct: 258 LNPY 261
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 52
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 53 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 109
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 110 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXH 163
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 164 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 208
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 35/267 (13%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
L ED + +G GA G VYKA+ K ++ +AA ++++ + +
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQ-----NKETSV-------LAAAKVIDTKS---EEE 77
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDW 351
+ EI H N++ L + ++ EF G++ ++ ++ +
Sbjct: 78 LEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP------ 131
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTR 411
L +I L+ L+ H IIHRD+K N+L + +++DFG++ + T
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRTI 189
Query: 412 IRITTVAGTTGYVAPEYHQTLTISE-----KSDIYSFGVLLAVLVVGKFPFDDFFQYTEE 466
R + GT ++APE T + K+D++S G+ L + + P E
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH-------HE 242
Query: 467 MNMVRWMRNVISSENPHRAIDSKLLGN 493
+N +R + + SE P A S+ N
Sbjct: 243 LNPMRVLLKIAKSEPPTLAQPSRWSSN 269
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 54
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 55 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSY 111
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 112 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXH 165
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 166 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 210
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 101/231 (43%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+ KI TE V I
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALXKI----RLDTETEGVPSTAIR------ 51
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 52 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 108
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ G T
Sbjct: 109 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 161
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 162 HEVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 101/231 (43%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+ KI TE V I
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALXKI----RLDTETEGVPSTAIR------ 50
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ L+ + + L + Y
Sbjct: 51 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSY 107
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ G T
Sbjct: 108 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 160
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 206
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 54
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ + L+ + + L + Y
Sbjct: 55 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSY 111
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 112 LFQ--LLQGLAFCHS-HR--VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXH 165
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 166 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 210
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 52
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+EF+ + L+ + + L + Y
Sbjct: 53 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSY 109
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 110 LFQ--LLQGLAFCHS-HR--VLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXH 163
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 164 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 208
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 31/237 (13%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
D L + +G GA G V +A+ G I K A ++L + + + R +
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFG-------IDKTATXRTVAVKML--KEGATHSEHRAL 77
Query: 296 KSEIITAGRIWHR-NLLPLQAHVTRPDCHLLV-YEFMKNGSLQDILH----------DVS 343
SE+ I H N++ L T+P L+V EF K G+L L D+
Sbjct: 78 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLY 137
Query: 344 QGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK 403
+ L+ L Y +A G+E+L IHRD+ N+L+ + +I DFGLA+
Sbjct: 138 KDFLTLEHLICYSFQ--VAKGMEFLASRK---XIHRDLAARNILLSEKNVVKICDFGLAR 192
Query: 404 LMPDGHTRIRITTVAGTTGYVAPE--YHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ +R ++APE + + TI +SD++SFGVLL + +G P+
Sbjct: 193 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPY 247
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 27/212 (12%)
Query: 324 LLVYEFMKNGSLQDILHDVSQGRRE----LDWLARYRIARGMASGLEYLHMYHRPCIIHR 379
+++ FMK+G L L G L L R+ + +A G+EYL + IHR
Sbjct: 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV--DIACGMEYLSSRN---FIHR 161
Query: 380 DIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSD 439
D+ N ++ + M ++DFGL++ + G + ++A E + SD
Sbjct: 162 DLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSD 221
Query: 440 IYSFGVLL-AVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQ 498
+++FGV + ++ G+ P+ E + ++ + P E
Sbjct: 222 VWAFGVTMWEIMTRGQTPYAGI----ENAEIYNYLIGGNRLKQP-------------PEC 264
Query: 499 MRLVLKIAYFCTSDDPEERPSSKDVRCMLSQI 530
M V + Y C S DP++RPS +R L I
Sbjct: 265 MEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 111/248 (44%), Gaps = 26/248 (10%)
Query: 241 LEIIGVGACGVVYKA-EVPG-SYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSE 298
L+++G GA G V+ ++ G GK+ A+K + + AT + + R RQ+
Sbjct: 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKK----ATIVQKAKTTEHTRTERQVLEH 114
Query: 299 IITAGRIWHRNLLPLQ-AHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRI 357
I + L+ L A T HL++ +++ G L +SQ R + + +
Sbjct: 115 IRQS-----PFLVTLHYAFQTETKLHLIL-DYINGGEL---FTHLSQRERFTEHEVQIYV 165
Query: 358 ARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTV 417
+ LE+LH + II+RDIK N+L+D ++DFGL+K T R
Sbjct: 166 GE-IVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDF 220
Query: 418 AGTTGYVAPEYHQTLTISEKS--DIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRN 475
GT Y+AP+ + D +S GVL+ L+ G PF E+ + R
Sbjct: 221 CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT---VDGEKNSQAEISRR 277
Query: 476 VISSENPH 483
++ SE P+
Sbjct: 278 ILKSEPPY 285
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 36/237 (15%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVP-GSYGKM-IAIKKI--DQPPMAATELLNVRRV 286
+ KE L ++++G GA G VYK +P G K+ +AIK + + P A E+L+ V
Sbjct: 13 ILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYV 72
Query: 287 LINRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGR 346
+ G + LL + T LV + M G L D + + ++GR
Sbjct: 73 MAG------------VGSPYVSRLLGICLTSTVQ----LVTQLMPYGCLLDHVRE-NRGR 115
Query: 347 RE----LDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLA 402
L+W + +A G+ YL ++HRD+ NVL+ +I+DFGLA
Sbjct: 116 LGSQDLLNWCMQ------IAKGMSYLEDVR---LVHRDLAARNVLVKSPNHVKITDFGLA 166
Query: 403 KLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
+L+ T ++A E + +SD++S+GV + ++ G P+D
Sbjct: 167 RLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 321 DCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRD 380
D ++LV + + SL+D+ + S R+L +A M + +E++H +HRD
Sbjct: 76 DYNVLVMDLL-GPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVHS---KSFLHRD 128
Query: 381 IKPANVLIDDGMEAR---ISDFGLAKLMPDGHTRIRIT-----TVAGTTGYVAPEYHQTL 432
IKP N L+ G A I DFGLAK D T I + GT Y + H +
Sbjct: 129 IKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGI 188
Query: 433 TISEKSDIYSFGVLLAVLVVGKFPF 457
S + D+ S G +L + G P+
Sbjct: 189 EQSRRDDLESLGYVLMYFLRGSLPW 213
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 39/269 (14%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
L ED + +G GA G VYKA+ K ++ +AA ++++ + +
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQ-----NKETSV-------LAAAKVIDTKS---EEE 77
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDW 351
+ EI H N++ L + ++ EF G++ ++ ++ +
Sbjct: 78 LEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP------ 131
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTR 411
L +I L+ L+ H IIHRD+K N+L + +++DFG++ +TR
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA----KNTR 187
Query: 412 I--RITTVAGTTGYVAPEYHQTLTISE-----KSDIYSFGVLLAVLVVGKFPFDDFFQYT 464
R + GT ++APE T + K+D++S G+ L + + P
Sbjct: 188 XIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH------- 240
Query: 465 EEMNMVRWMRNVISSENPHRAIDSKLLGN 493
E+N +R + + SE P A S+ N
Sbjct: 241 HELNPMRVLLKIAKSEPPTLAQPSRWSSN 269
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 87/210 (41%), Gaps = 23/210 (10%)
Query: 324 LLVYEFMKNGSLQDIL--HDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDI 381
+++ FMK G L L + G + + + +A G+EYL + +HRD+
Sbjct: 117 MVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDL 173
Query: 382 KPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIY 441
N ++ D M ++DFGL+K + G + ++A E + KSD++
Sbjct: 174 AARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVW 233
Query: 442 SFGVLL-AVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMR 500
+FGV + + G P+ + M ++ + + P +D
Sbjct: 234 AFGVTMWEIATRGMTPYPG----VQNHEMYDYLLHGHRLKQPEDCLDE------------ 277
Query: 501 LVLKIAYFCTSDDPEERPSSKDVRCMLSQI 530
+ +I Y C DP +RP+ +R L ++
Sbjct: 278 -LYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGM---EARISDFGLAKLMPDGHTRI 412
R+ + + G+ YLH + I+H D+KP N+L+ + +I DFG+++ + GH
Sbjct: 135 RLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI--GHA-C 188
Query: 413 RITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPF 457
+ + GT Y+APE I+ +D+++ G++ +L+ PF
Sbjct: 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 105/240 (43%), Gaps = 38/240 (15%)
Query: 229 IAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLI 288
+A + KE L L+++G G G V+K + P + ++ +V+
Sbjct: 24 LARIFKETELRKLKVLGSGVFGTVHKG--------------VWIPEGESIKIPVCIKVIE 69
Query: 289 NRKMRQ----IKSEIITAGRIWHRNLLPLQAHVTR-----PDCHL-LVYEFMKNGSLQDI 338
++ RQ + ++ G + H AH+ R P L LV +++ GSL D
Sbjct: 70 DKSGRQSFQAVTDHMLAIGSLDH-------AHIVRLLGLCPGSSLQLVTQYLPLGSLLD- 121
Query: 339 LHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISD 398
V Q R L +A G+ YL + ++HR++ NVL+ + +++D
Sbjct: 122 --HVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVAD 176
Query: 399 FGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPF 457
FG+A L+P ++ + ++A E + +SD++S+GV + ++ G P+
Sbjct: 177 FGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 236
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 123/305 (40%), Gaps = 59/305 (19%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK-MRQIKS-- 297
++ +G G GVV++A+ K+D A + R L K MR++K+
Sbjct: 10 IQCLGRGGFGVVFEAK-----------NKVDDCNYAIKRIRLPNRELAREKVMREVKALA 58
Query: 298 -----EIITAGRIWHRNLLPLQAHVTRPDCHLLV-YEFMKNGSLQDILHDVSQGRRELDW 351
I+ W + + P +L + + + +L+D ++ GR ++
Sbjct: 59 KLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN----GRCTIEE 114
Query: 352 LAR---YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDG 408
R I +A +E+LH ++HRD+KP+N+ ++ DFGL M
Sbjct: 115 RERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD 171
Query: 409 HTR----------IRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLVVGKFPFD 458
R T GT Y++PE + S K DI+S G++L F+
Sbjct: 172 EEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLIL---------FE 222
Query: 459 DFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERP 518
+ ++ +M VR + +V + + P L Y + +V + S P ERP
Sbjct: 223 LLYPFSTQMERVRTLTDVRNLKFP------PLFTQKYPCEYVMVQDML----SPSPMERP 272
Query: 519 SSKDV 523
+ ++
Sbjct: 273 EAINI 277
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 100/235 (42%), Gaps = 54/235 (22%)
Query: 244 IGVGACGVVYKAEVPGSYG----KMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEI 299
IG GA G V++A PG M+A+K + + A + R + M + +
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL---MAEFDNPN 111
Query: 300 ITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQ--------------- 344
I LL + A V +P C L++E+M G L + L +S
Sbjct: 112 IV-------KLLGVCA-VGKPMC--LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRA 161
Query: 345 -----GRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDF 399
G L + IAR +A+G+ YL +HRD+ N L+ + M +I+DF
Sbjct: 162 RVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADF 218
Query: 400 GLAKLM-------PDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL 447
GL++ + DG+ I I ++ PE + +SD++++GV+L
Sbjct: 219 GLSRNIYSADYYKADGNDAIPIR-------WMPPESIFYNRYTTESDVWAYGVVL 266
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK-LMPDGHTRIRITTVAGTTG 422
G++YL +HRD+ NVL+ A+ISDFGL+K L D + T
Sbjct: 123 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVK 179
Query: 423 YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ APE S KSD++SFGVL+ G+ P+
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 105/240 (43%), Gaps = 38/240 (15%)
Query: 229 IAFLTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLI 288
+A + KE L L+++G G G V+K + P + ++ +V+
Sbjct: 6 LARIFKETELRKLKVLGSGVFGTVHKG--------------VWIPEGESIKIPVCIKVIE 51
Query: 289 NRKMRQ----IKSEIITAGRIWHRNLLPLQAHVTR-----PDCHL-LVYEFMKNGSLQDI 338
++ RQ + ++ G + H AH+ R P L LV +++ GSL D
Sbjct: 52 DKSGRQSFQAVTDHMLAIGSLDH-------AHIVRLLGLCPGSSLQLVTQYLPLGSLLD- 103
Query: 339 LHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISD 398
V Q R L +A G+ YL + ++HR++ NVL+ + +++D
Sbjct: 104 --HVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVAD 158
Query: 399 FGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPF 457
FG+A L+P ++ + ++A E + +SD++S+GV + ++ G P+
Sbjct: 159 FGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 218
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 355 YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRI 414
Y++A+GMA + + CI HRD+ N+L+ G +I DFGLA+ + + +
Sbjct: 175 YQVAKGMA------FLASKNCI-HRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 415 TTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLV-VGKFPFDDFFQYTEEMNMVRWM 473
++APE + +SD++S+G+ L L +G P+ ++ M++
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 287
Query: 474 RNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
++S E+ +M ++K C DP +RP+ K +
Sbjct: 288 FRMLSPEHA-------------PAEMYDIMKT---CWDADPLKRPTFKQI 321
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 28/226 (12%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHM-----YHRPCIIHR 379
LV ++ ++GSL D L+ R + ++A ASGL +LHM +P I HR
Sbjct: 104 LVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 158
Query: 380 DIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITT--VAGTTGYVAPEY------HQT 431
D+K N+L+ I+D GLA I I GT Y+APE +
Sbjct: 159 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 218
Query: 432 LTISEKSDIYSFGVLLAVLV----VGKFPFD---DFFQYTEEMNMVRWMRNVISSENPHR 484
+++DIY+ G++ + +G D ++ V MR V+ +
Sbjct: 219 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 278
Query: 485 AIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCMLSQI 530
I ++ E +R++ KI C + R ++ ++ LSQ+
Sbjct: 279 NIPNRWQSC---EALRVMAKIMRECWYANGAARLTALRIKKTLSQL 321
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK-LMPDGHTRIRITTVAGTTG 422
G++YL +HRD+ NVL+ A+ISDFGL+K L D + T
Sbjct: 119 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 175
Query: 423 YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ APE S KSD++SFGVL+ G+ P+
Sbjct: 176 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 211
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 104/243 (42%), Gaps = 28/243 (11%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHVT 318
G +GK+ + + +AA ++++ + ++ EI H N++ L
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 319 RPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIH 378
+ ++ EF G++ ++ ++ + L +I L+ L+ H IIH
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELERP------LTESQIQVVCKQTLDALNYLHDNKIIH 131
Query: 379 RDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT---TVAGTTGYVAPEYHQTLTIS 435
RD+K N+L + +++DFG++ +TR I + GT ++APE T
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSA----KNTRTXIQRRDSFIGTPYWMAPEVVMCETSK 187
Query: 436 E-----KSDIYSFGVLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKL 490
+ K+D++S G+ L + + P E+N +R + + SE P A S+
Sbjct: 188 DRPYDYKADVWSLGITLIEMAEIEPPH-------HELNPMRVLLKIAKSEPPTLAQPSRW 240
Query: 491 LGN 493
N
Sbjct: 241 SSN 243
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 39/269 (14%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
L ED + +G GA G VYKA+ K ++ +AA ++++ + +
Sbjct: 33 LNPEDFWEIIGELGDGAFGKVYKAQ-----NKETSV-------LAAAKVIDTKS---EEE 77
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDW 351
+ EI H N++ L + ++ EF G++ ++ ++ +
Sbjct: 78 LEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP------ 131
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTR 411
L +I L+ L+ H IIHRD+K N+L + +++DFG++ +TR
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA----KNTR 187
Query: 412 I--RITTVAGTTGYVAPEYHQTLTISE-----KSDIYSFGVLLAVLVVGKFPFDDFFQYT 464
R GT ++APE T + K+D++S G+ L + + P
Sbjct: 188 XIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH------- 240
Query: 465 EEMNMVRWMRNVISSENPHRAIDSKLLGN 493
E+N +R + + SE P A S+ N
Sbjct: 241 HELNPMRVLLKIAKSEPPTLAQPSRWSSN 269
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 28/226 (12%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHM-----YHRPCIIHR 379
LV ++ ++GSL D L+ R + ++A ASGL +LHM +P I HR
Sbjct: 79 LVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 133
Query: 380 DIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITT--VAGTTGYVAPEY------HQT 431
D+K N+L+ I+D GLA I I GT Y+APE +
Sbjct: 134 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 193
Query: 432 LTISEKSDIYSFGVLLAVLV----VGKFPFD---DFFQYTEEMNMVRWMRNVISSENPHR 484
+++DIY+ G++ + +G D ++ V MR V+ +
Sbjct: 194 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 253
Query: 485 AIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCMLSQI 530
I ++ E +R++ KI C + R ++ ++ LSQ+
Sbjct: 254 NIPNRWQSC---EALRVMAKIMRECWYANGAARLTALRIKKTLSQL 296
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 28/226 (12%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHM-----YHRPCIIHR 379
LV ++ ++GSL D L+ R + ++A ASGL +LHM +P I HR
Sbjct: 78 LVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 132
Query: 380 DIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITT--VAGTTGYVAPEY------HQT 431
D+K N+L+ I+D GLA I I GT Y+APE +
Sbjct: 133 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 192
Query: 432 LTISEKSDIYSFGVLLAVLV----VGKFPFD---DFFQYTEEMNMVRWMRNVISSENPHR 484
+++DIY+ G++ + +G D ++ V MR V+ +
Sbjct: 193 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 252
Query: 485 AIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCMLSQI 530
I ++ E +R++ KI C + R ++ ++ LSQ+
Sbjct: 253 NIPNRWQSC---EALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 28/226 (12%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHM-----YHRPCIIHR 379
LV ++ ++GSL D L+ R + ++A ASGL +LHM +P I HR
Sbjct: 81 LVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 135
Query: 380 DIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITT--VAGTTGYVAPEY------HQT 431
D+K N+L+ I+D GLA I I GT Y+APE +
Sbjct: 136 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 195
Query: 432 LTISEKSDIYSFGVLLAVLV----VGKFPFD---DFFQYTEEMNMVRWMRNVISSENPHR 484
+++DIY+ G++ + +G D ++ V MR V+ +
Sbjct: 196 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 255
Query: 485 AIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCMLSQI 530
I ++ E +R++ KI C + R ++ ++ LSQ+
Sbjct: 256 NIPNRWQSC---EALRVMAKIMRECWYANGAARLTALRIKKTLSQL 298
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK-LMPDGHTRIRITTVAGTTG 422
G++YL +HRD+ NVL+ A+ISDFGL+K L D + T
Sbjct: 117 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 173
Query: 423 YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ APE S KSD++SFGVL+ G+ P+
Sbjct: 174 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 209
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK-LMPDGHTRIRITTVAGTTG 422
G++YL +HRD+ NVL+ A+ISDFGL+K L D + T
Sbjct: 129 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 185
Query: 423 YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ APE S KSD++SFGVL+ G+ P+
Sbjct: 186 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 221
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 28/226 (12%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHM-----YHRPCIIHR 379
LV ++ ++GSL D L+ R + ++A ASGL +LHM +P I HR
Sbjct: 84 LVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 138
Query: 380 DIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITT--VAGTTGYVAPEY------HQT 431
D+K N+L+ I+D GLA I I GT Y+APE +
Sbjct: 139 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 198
Query: 432 LTISEKSDIYSFGVLLAVLV----VGKFPFD---DFFQYTEEMNMVRWMRNVISSENPHR 484
+++DIY+ G++ + +G D ++ V MR V+ +
Sbjct: 199 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 258
Query: 485 AIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCMLSQI 530
I ++ E +R++ KI C + R ++ ++ LSQ+
Sbjct: 259 NIPNRWQSC---EALRVMAKIMRECWYANGAARLTALRIKKTLSQL 301
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 355 YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRI 414
Y++A+GMA + + CI HRD+ N+L+ G +I DFGLA+ + + +
Sbjct: 170 YQVAKGMA------FLASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 415 TTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLV-VGKFPFDDFFQYTEEMNMVRWM 473
++APE + +SD++S+G+ L L +G P+ ++ M++
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 282
Query: 474 RNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
++S E+ +M ++K C DP +RP+ K +
Sbjct: 283 FRMLSPEHA-------------PAEMYDIMKT---CWDADPLKRPTFKQI 316
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 101/231 (43%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 50
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+E + L+ + + L + Y
Sbjct: 51 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSY 107
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ G T
Sbjct: 108 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYT 160
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 206
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK-LMPDGHTRIRITTVAGTTG 422
G++YL +HRD+ NVL+ A+ISDFGL+K L D + T
Sbjct: 123 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 179
Query: 423 YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ APE S KSD++SFGVL+ G+ P+
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 28/226 (12%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHM-----YHRPCIIHR 379
LV ++ ++GSL D L+ R + ++A ASGL +LHM +P I HR
Sbjct: 117 LVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 171
Query: 380 DIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITT--VAGTTGYVAPEY------HQT 431
D+K N+L+ I+D GLA I I GT Y+APE +
Sbjct: 172 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 231
Query: 432 LTISEKSDIYSFGVLLAVLV----VGKFPFD---DFFQYTEEMNMVRWMRNVISSENPHR 484
+++DIY+ G++ + +G D ++ V MR V+ +
Sbjct: 232 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 291
Query: 485 AIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDVRCMLSQI 530
I ++ E +R++ KI C + R ++ ++ LSQ+
Sbjct: 292 NIPNRWQSC---EALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK-LMPDGHTRIRITTVAGTTG 422
G++YL +HRD+ NVL+ A+ISDFGL+K L D + T
Sbjct: 139 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 195
Query: 423 YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ APE S KSD++SFGVL+ G+ P+
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK-LMPDGHTRIRITTVAGTTG 422
G++YL +HRD+ NVL+ A+ISDFGL+K L D + T
Sbjct: 139 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 195
Query: 423 YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ APE S KSD++SFGVL+ G+ P+
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 355 YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRI 414
Y++A+GMA + + CI HRD+ N+L+ G +I DFGLA+ + + +
Sbjct: 168 YQVAKGMA------FLASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 415 TTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLV-VGKFPFDDFFQYTEEMNMVRWM 473
++APE + +SD++S+G+ L L +G P+ ++ M++
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 280
Query: 474 RNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
++S E+ +M ++K C DP +RP+ K +
Sbjct: 281 FRMLSPEHA-------------PAEMYDIMKT---CWDADPLKRPTFKQI 314
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 105/259 (40%), Gaps = 33/259 (12%)
Query: 276 AATELLNVRRVLI-------NRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYE 328
A +L N R+ I +R + + EI + H+N++ + + E
Sbjct: 40 AGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME 99
Query: 329 FMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLI 388
+ GSL +L ++ + + + + GL+YLH I+HRDIK NVLI
Sbjct: 100 QVPGGSLSALLRSKWGPLKDNEQTIGF-YTKQILEGLKYLHDNQ---IVHRDIKGDNVLI 155
Query: 389 D--DGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEY--HQTLTISEKSDIYSFG 444
+ G+ +ISDFG +K + T GT Y+APE + +DI+S G
Sbjct: 156 NTYSGV-LKISDFGTSKRL--AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLG 212
Query: 445 VLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLK 504
+ + GK PF + + M V + + E P E +LK
Sbjct: 213 CTIIEMATGKPPFYELGEPQAAMFKVGMFK--VHPEIPESM---------SAEAKAFILK 261
Query: 505 IAYFCTSDDPEERPSSKDV 523
C DP++R + D+
Sbjct: 262 ----CFEPDPDKRACANDL 276
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 355 YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRI 414
Y++A+GMA + + CI HRD+ N+L+ G +I DFGLA+ + + +
Sbjct: 175 YQVAKGMA------FLASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 415 TTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLV-VGKFPFDDFFQYTEEMNMVRWM 473
++APE + +SD++S+G+ L L +G P+ ++ M++
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 287
Query: 474 RNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
++S E+ +M ++K C DP +RP+ K +
Sbjct: 288 FRMLSPEHA-------------PAEMYDIMKT---CWDADPLKRPTFKQI 321
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK-LMPDGHTRIRITTVAGTTG 422
G++YL +HRD+ NVL+ A+ISDFGL+K L D + T
Sbjct: 137 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 193
Query: 423 YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ APE S KSD++SFGVL+ G+ P+
Sbjct: 194 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 229
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 105/259 (40%), Gaps = 33/259 (12%)
Query: 276 AATELLNVRRVLI-------NRKMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYE 328
A +L N R+ I +R + + EI + H+N++ + + E
Sbjct: 26 AGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME 85
Query: 329 FMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLI 388
+ GSL +L ++ + + + + GL+YLH I+HRDIK NVLI
Sbjct: 86 QVPGGSLSALLRSKWGPLKDNEQTIGF-YTKQILEGLKYLHDNQ---IVHRDIKGDNVLI 141
Query: 389 D--DGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEY--HQTLTISEKSDIYSFG 444
+ G+ +ISDFG +K + T GT Y+APE + +DI+S G
Sbjct: 142 NTYSGV-LKISDFGTSKRL--AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLG 198
Query: 445 VLLAVLVVGKFPFDDFFQYTEEMNMVRWMRNVISSENPHRAIDSKLLGNGYEEQMRLVLK 504
+ + GK PF + + M V + + E P E +LK
Sbjct: 199 CTIIEMATGKPPFYELGEPQAAMFKVGMFK--VHPEIPESM---------SAEAKAFILK 247
Query: 505 IAYFCTSDDPEERPSSKDV 523
C DP++R + D+
Sbjct: 248 ----CFEPDPDKRACANDL 262
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 355 YRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRI 414
Y++A+GMA + + CI HRD+ N+L+ G +I DFGLA+ + + +
Sbjct: 152 YQVAKGMA------FLASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 415 TTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLLAVLV-VGKFPFDDFFQYTEEMNMVRWM 473
++APE + +SD++S+G+ L L +G P+ ++ M++
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEG 264
Query: 474 RNVISSENPHRAIDSKLLGNGYEEQMRLVLKIAYFCTSDDPEERPSSKDV 523
++S E+ +M ++K C DP +RP+ K +
Sbjct: 265 FRMLSPEHA-------------PAEMYDIMKT---CWDADPLKRPTFKQI 298
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 36 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 84
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L+ + M G L D + H + G +
Sbjct: 85 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 143
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 144 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 194
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 195 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 60
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L++ + M G L D + H + G +
Sbjct: 61 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY 119
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 120 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 170
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 171 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 61
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L++ + M G L D + H + G +
Sbjct: 62 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY 120
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 121 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 171
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 5 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 53
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L+ + M G L D + H + G +
Sbjct: 54 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 112
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 113 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 163
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 164 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 21 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 69
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L+ + M G L D + H + G +
Sbjct: 70 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 128
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 129 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 179
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 180 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 62
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L++ + M G L D + H + G +
Sbjct: 63 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY 121
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 122 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 63
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L++ + M G L D + H + G +
Sbjct: 64 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY 122
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 123 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 173
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 174 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 59
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L++ + M G L D + H + G +
Sbjct: 60 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY 118
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 119 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 61
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L+ + M G L D + H + G +
Sbjct: 62 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 120
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 121 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 171
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 60
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L++ + M G L D + H + G +
Sbjct: 61 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQY 119
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 120 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 170
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 171 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 24/231 (10%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
+ KE ++++G GA G VYK G I + + P+A EL R +
Sbjct: 17 ILKETEFKKIKVLGSGAFGTVYK-------GLWIPEGEKVKIPVAIKEL---REATSPKA 66
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRREL 349
++I E + + ++ L L+ + M G L D + H + G + L
Sbjct: 67 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 125
Query: 350 -DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDG 408
+W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 126 LNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 176
Query: 409 HTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 177 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
GS+G++ IA++K + AA ++ ++R K EI + H N++ L
Sbjct: 37 GSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDR----FKQEIEIMKSLDHPNIIRLYETF 92
Query: 318 TRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
LV E G L + ++H + RE D RI + + S + Y H + +
Sbjct: 93 EDNTDIYLVMELCTGGELFERVVH--KRVFRESD---AARIMKDVLSAVAYCHKLN---V 144
Query: 377 IHRDIKPANVL-IDDGMEA--RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLT 433
HRD+KP N L + D ++ ++ DFGLA G + T GT YV+P+ + L
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM---MRTKVGTPYYVSPQVLEGLY 201
Query: 434 ISEKSDIYSFGVLLAVLVVGKFPF 457
E D +S GV++ VL+ G PF
Sbjct: 202 GPE-CDEWSAGVMMYVLLCGYPPF 224
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 62
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L+ + M G L D + H + G +
Sbjct: 63 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 121
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 122 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 59
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L+ + M G L D + H + G +
Sbjct: 60 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 118
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 119 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 62
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L+ + M G L D + H + G +
Sbjct: 63 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 121
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 122 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 62
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L+ + M G L D + H + G +
Sbjct: 63 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 121
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 122 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 172
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 173 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 259 GSYGKM-IAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAGRIWHRNLLPLQAHV 317
GS+G++ IA++K + AA ++ ++R K EI + H N++ L
Sbjct: 20 GSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDR----FKQEIEIMKSLDHPNIIRLYETF 75
Query: 318 TRPDCHLLVYEFMKNGSL-QDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCI 376
LV E G L + ++H + RE D RI + + S + Y H + +
Sbjct: 76 EDNTDIYLVMELCTGGELFERVVH--KRVFRESD---AARIMKDVLSAVAYCHKLN---V 127
Query: 377 IHRDIKPANVL-IDDGMEA--RISDFGLAKLMPDGHTRIRITTVAGTTGYVAPEYHQTLT 433
HRD+KP N L + D ++ ++ DFGLA G + T GT YV+P+ + L
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM---MRTKVGTPYYVSPQVLEGLY 184
Query: 434 ISEKSDIYSFGVLLAVLVVGKFPF 457
E D +S GV++ VL+ G PF
Sbjct: 185 GPE-CDEWSAGVMMYVLLCGYPPF 207
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 59
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L+ + M G L D + H + G +
Sbjct: 60 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 118
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 119 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 24/231 (10%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
+ KE ++++G GA G VYK G I + + P+A EL R +
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYK-------GLWIPEGEKVKIPVAIKEL---REATSPKA 67
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRREL 349
++I E + + ++ L L+ + M G L D + H + G + L
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 126
Query: 350 -DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDG 408
+W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 127 LNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 177
Query: 409 HTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 24/231 (10%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
+ KE ++++G GA G VYK G I + + P+A EL R +
Sbjct: 8 ILKETEFKKIKVLGSGAFGTVYK-------GLWIPEGEKVKIPVAIKEL---REATSPKA 57
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRREL 349
++I E + + ++ L L+ + M G L D + H + G + L
Sbjct: 58 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 116
Query: 350 -DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDG 408
+W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 117 LNWCVQ------IAEGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 167
Query: 409 HTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 168 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 59
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L+ + M G L D + H + G +
Sbjct: 60 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQY 118
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 119 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 45 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIMEL---REATSPK 93
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L+ + M G L D + H + G +
Sbjct: 94 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 152
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 153 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 203
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 204 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 55/242 (22%)
Query: 244 IGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEIITAG 303
+G GA G+V+K+ + G+++A+KKI +T+ R R+I +I
Sbjct: 17 LGKGAYGIVWKS-IDRRTGEVVAVKKIFDAFQNSTDA--------QRTFREI---MILTE 64
Query: 304 RIWHRNLLPLQAHVTRPDCH---LLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARG 360
H N++ L +V R D LV+++M+ LH V + L+ + + +
Sbjct: 65 LSGHENIVNL-LNVLRADNDRDVYLVFDYMETD-----LHAVIRANI-LEPVHKQYVVYQ 117
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIR------- 413
+ ++YLH ++HRD+KP+N+L++ +++DFGL++ IR
Sbjct: 118 LIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSR----SFVNIRRVTNNIP 170
Query: 414 ----------------ITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGK-- 454
+T T Y APE T K D++S G +L ++ GK
Sbjct: 171 LSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230
Query: 455 FP 456
FP
Sbjct: 231 FP 232
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK-LMPDGHTRIRITTVAGTTG 422
G++YL + +HRD+ NVL+ A+ISDFGL+K L D + T
Sbjct: 481 GMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 537
Query: 423 YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ APE S KSD++SFGVL+ G+ P+
Sbjct: 538 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 573
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 364 GLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK-LMPDGHTRIRITTVAGTTG 422
G++YL + +HRD+ NVL+ A+ISDFGL+K L D + T
Sbjct: 482 GMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 538
Query: 423 YVAPEYHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
+ APE S KSD++SFGVL+ G+ P+
Sbjct: 539 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 574
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 236 DSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQI 295
++ +E IG G GVVYKA + G+++A+KKI TE V I
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKI----RLDTETEGVPSTAIR------ 54
Query: 296 KSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY 355
EI + H N++ L + + LV+E + + L+ + + L + Y
Sbjct: 55 --EISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSY 111
Query: 356 RIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRIT 415
+ GL + H HR ++HRD+KP N+LI+ +++DFGLA+ R
Sbjct: 112 LFQ--LLQGLAFCHS-HR--VLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXH 165
Query: 416 TVAGTTGYVAPE------YHQTLTISEKSDIYSFGVLLAVLVVGK--FPFD 458
V T Y APE Y+ T DI+S G + A +V + FP D
Sbjct: 166 EVV-TLWYRAPEILLGCKYYSTAV-----DIWSLGCIFAEMVTRRALFPGD 210
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 113/236 (47%), Gaps = 45/236 (19%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKSEII 300
L+ +G G G+V+ A V K +AIKKI T+ +V+ L R+++ I+
Sbjct: 16 LKPLGCGGNGLVFSA-VDNDCDKRVAIKKI-----VLTDPQSVKHAL--REIKIIR---- 63
Query: 301 TAGRIWHRNLLPL--------------QAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGR 346
R+ H N++ + +T + +V E+M+ D+ + + QG
Sbjct: 64 ---RLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET----DLANVLEQGP 116
Query: 347 --RELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAK 403
E L Y++ RG L+Y+H + ++HRD+KPAN+ I+ + + +I DFGLA+
Sbjct: 117 LLEEHARLFMYQLLRG----LKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLAR 169
Query: 404 LM-PDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPF 457
+M P + ++ T Y +P + K+ D+++ G + A ++ GK F
Sbjct: 170 IMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLF 225
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 16/149 (10%)
Query: 324 LLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKP 383
LL+ E K G L + L + + R L +I ++++H +P IIHRD+K
Sbjct: 110 LLLTELCK-GQLVEFLKKM-ESRGPLSCDTVLKIFYQTCRAVQHMHR-QKPPIIHRDLKV 166
Query: 384 ANVLIDDGMEARISDFGLAKLM---PD----GHTRIRI---TTVAGTTGYVAPE---YHQ 430
N+L+ + ++ DFG A + PD R + T T Y PE +
Sbjct: 167 ENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYS 226
Query: 431 TLTISEKSDIYSFGVLLAVLVVGKFPFDD 459
I EK DI++ G +L +L + PF+D
Sbjct: 227 NFPIGEKQDIWALGCILYLLCFRQHPFED 255
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G+E+L R CI HRD+ N+L+ + +I DFGLA+ + +R
Sbjct: 207 VAKGMEFLA--SRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 421 TGYVAPE--YHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
++APE + + TI +SD++SFGVLL + +G P+
Sbjct: 264 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPY 301
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G+E+L R CI HRD+ N+L+ + +I DFGLA+ + +R
Sbjct: 200 VAKGMEFLA--SRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 421 TGYVAPE--YHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
++APE + + TI +SD++SFGVLL + +G P+
Sbjct: 257 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPY 294
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G+E+L R CI HRD+ N+L+ + +I DFGLA+ + +R
Sbjct: 209 VAKGMEFLA--SRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 421 TGYVAPE--YHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
++APE + + TI +SD++SFGVLL + +G P+
Sbjct: 266 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPY 303
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 361 MASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGT 420
+A G+E+L R CI HRD+ N+L+ + +I DFGLA+ + +R
Sbjct: 202 VAKGMEFLA--SRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 421 TGYVAPE--YHQTLTISEKSDIYSFGVLL-AVLVVGKFPF 457
++APE + + TI +SD++SFGVLL + +G P+
Sbjct: 259 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEIFSLGASPY 296
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 35/209 (16%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNV----RRVLI---NRKMRQIKSEIITAGRIWHRNLL 311
GSYG + A + P+A + N R V I + +++ EI H N+L
Sbjct: 33 GSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92
Query: 312 PLQ---AHVTRPDCH--LLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLE 366
L+ H P H LV E M+ L ++HD + ++ I M L
Sbjct: 93 GLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHD------QRIVISPQHIQYFMYHILL 145
Query: 367 YLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYV-- 424
LH+ H ++HRD+ P N+L+ D + I DF LA+ T A T YV
Sbjct: 146 GLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR---------EDTADANKTHYVTH 196
Query: 425 ----APEY-HQTLTISEKSDIYSFGVLLA 448
APE Q ++ D++S G ++A
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMA 225
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLM-PDGH 409
L Y I M L+ L H I+HRD+KP NVLID + + R+ D+GLA+ P
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 410 TRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPF----------- 457
+R+ + + PE + + S D++S G +LA ++ K PF
Sbjct: 188 YNVRV----ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 458 --------DDFFQYTEEMNM---------------VRWMRNVISSENPH----RAID--S 488
+D + Y ++ N+ RW R + SEN H A+D
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER-FVHSENQHLVSPEALDFLD 302
Query: 489 KLLGNGYEEQMRLVLKIA----YFCT 510
KLL Y+ Q RL + A YF T
Sbjct: 303 KLL--RYDHQSRLTAREAMEHPYFYT 326
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 35/209 (16%)
Query: 259 GSYGKMIAIKKIDQPPMAATELLNV----RRVLI---NRKMRQIKSEIITAGRIWHRNLL 311
GSYG + A + P+A + N R V I + +++ EI H N+L
Sbjct: 33 GSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92
Query: 312 PLQ---AHVTRPDCH--LLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLE 366
L+ H P H LV E M+ L ++HD + ++ I M L
Sbjct: 93 GLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHD------QRIVISPQHIQYFMYHILL 145
Query: 367 YLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDGHTRIRITTVAGTTGYV-- 424
LH+ H ++HRD+ P N+L+ D + I DF LA+ T A T YV
Sbjct: 146 GLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR---------EDTADANKTHYVTH 196
Query: 425 ----APEY-HQTLTISEKSDIYSFGVLLA 448
APE Q ++ D++S G ++A
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMA 225
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 25/174 (14%)
Query: 307 HRNLLPLQAHVTRPDCH----LLVYEFMKNGSLQDILHDVSQGRRELDWLARYRIAR--- 359
H N+L L A+ R L+ F K G+L + ++ + + + ++L +I
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWN---EIERLKDKGNFLTEDQILWLLL 141
Query: 360 GMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFG---LAKLMPDGHTRIRIT- 415
G+ GLE +H HRD+KP N+L+ D + + D G A + +G +R +T
Sbjct: 142 GICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG-SRQALTL 197
Query: 416 ----TVAGTTGYVAPEY---HQTLTISEKSDIYSFGVLLAVLVVGKFPFDDFFQ 462
T Y APE I E++D++S G +L ++ G+ P+D FQ
Sbjct: 198 QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ 251
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 236 DSLASLEIIGVGACGVVYKAE----VPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
+ + L +G G+ G+VY+ + G +A+K +++ + +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE------------SASLRER 64
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDV------SQG 345
+ + + G H +++ L V++ L+V E M +G L+ L + + G
Sbjct: 65 IEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 346 RRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM 405
R ++A +A G+ YL+ +HRD+ N ++ +I DFG+ + +
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 406 PDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL 447
+ + ++APE + + SD++SFGV+L
Sbjct: 181 XETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 236 DSLASLEIIGVGACGVVYKAE----VPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
+ + L +G G+ G+VY+ + G +A+K +++ + +
Sbjct: 14 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE------------SASLRER 61
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDV------SQG 345
+ + + G H +++ L V++ L+V E M +G L+ L + + G
Sbjct: 62 IEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 120
Query: 346 RRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM 405
R ++A +A G+ YL+ +HRD+ N ++ +I DFG+ + +
Sbjct: 121 RPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDI 177
Query: 406 PDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL 447
+ + ++APE + + SD++SFGV+L
Sbjct: 178 XETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 219
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 236 DSLASLEIIGVGACGVVYKAE----VPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
+ + L +G G+ G+VY+ + G +A+K +++ + +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE------------SASLRER 64
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDV------SQG 345
+ + + G H +++ L V++ L+V E M +G L+ L + + G
Sbjct: 65 IEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 346 RRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM 405
R ++A +A G+ YL+ +HRD+ N ++ +I DFG+ + +
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 406 PDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL 447
+ + ++APE + + SD++SFGV+L
Sbjct: 181 XETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 61
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L++ + M G L D + H + G +
Sbjct: 62 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY 120
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFG AKL+
Sbjct: 121 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 171
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 63
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L++ + M G L D + H + G +
Sbjct: 64 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY 122
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFG AKL+
Sbjct: 123 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 173
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 174 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLM-PDGH 409
L Y I M L+ L H I+HRD+KP NV+ID + + R+ D+GLA+ P
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 410 TRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPF----------- 457
+R+ + + PE + + S D++S G +LA ++ K PF
Sbjct: 188 YNVRV----ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 458 --------DDFFQYTEEMNM---------------VRWMRNVISSENPH----RAID--S 488
+D + Y ++ N+ RW R + SEN H A+D
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER-FVHSENQHLVSPEALDFLD 302
Query: 489 KLLGNGYEEQMRLVLKIA----YFCT 510
KLL Y+ Q RL + A YF T
Sbjct: 303 KLL--RYDHQSRLTAREAMEHPYFYT 326
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 61
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L++ + M G L D + H + G +
Sbjct: 62 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQY 120
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFG AKL+
Sbjct: 121 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 171
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLM-PDGH 409
L Y I M L+ L H I+HRD+KP NV+ID + + R+ D+GLA+ P
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 410 TRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPF----------- 457
+R+ + + PE + + S D++S G +LA ++ K PF
Sbjct: 188 YNVRV----ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 458 --------DDFFQYTEEMNM---------------VRWMRNVISSENPH----RAID--S 488
+D + Y ++ N+ RW R + SEN H A+D
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER-FVHSENQHLVSPEALDFLD 302
Query: 489 KLLGNGYEEQMRLVLKIA----YFCT 510
KLL Y+ Q RL + A YF T
Sbjct: 303 KLL--RYDHQSRLTAREAMEHPYFYT 326
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLM-PDGH 409
L Y I M L+ L H I+HRD+KP NV+ID + + R+ D+GLA+ P
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 410 TRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPF----------- 457
+R+ + + PE + + S D++S G +LA ++ K PF
Sbjct: 188 YNVRV----ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 458 --------DDFFQYTEEMNM---------------VRWMRNVISSENPH----RAID--S 488
+D + Y ++ N+ RW R + SEN H A+D
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER-FVHSENQHLVSPEALDFLD 302
Query: 489 KLLGNGYEEQMRLVLKIA----YFCT 510
KLL Y+ Q RL + A YF T
Sbjct: 303 KLL--RYDHQSRLTAREAMEHPYFYT 326
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLM-PDGH 409
L Y I M L+ L H I+HRD+KP NV+ID + + R+ D+GLA+ P
Sbjct: 127 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 186
Query: 410 TRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPF----------- 457
+R+ + + PE + + S D++S G +LA ++ K PF
Sbjct: 187 YNVRV----ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242
Query: 458 --------DDFFQYTEEMNM---------------VRWMRNVISSENPH----RAID--S 488
+D + Y ++ N+ RW R + SEN H A+D
Sbjct: 243 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER-FVHSENQHLVSPEALDFLD 301
Query: 489 KLLGNGYEEQMRLVLKIA----YFCT 510
KLL Y+ Q RL + A YF T
Sbjct: 302 KLL--RYDHQSRLTAREAMEHPYFYT 325
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLM-PDGH 409
L Y I M L+ L H I+HRD+KP NV+ID + + R+ D+GLA+ P
Sbjct: 127 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 186
Query: 410 TRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPF----------- 457
+R+ + + PE + + S D++S G +LA ++ K PF
Sbjct: 187 YNVRV----ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242
Query: 458 --------DDFFQYTEEMNM---------------VRWMRNVISSENPH----RAID--S 488
+D + Y ++ N+ RW R + SEN H A+D
Sbjct: 243 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER-FVHSENQHLVSPEALDFLD 301
Query: 489 KLLGNGYEEQMRLVLKIA----YFCT 510
KLL Y+ Q RL + A YF T
Sbjct: 302 KLL--RYDHQSRLTAREAMEHPYFYT 325
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLM-PDGH 409
L Y I M L+ L H I+HRD+KP NV+ID + + R+ D+GLA+ P
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 410 TRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPF----------- 457
+R+ + + PE + + S D++S G +LA ++ K PF
Sbjct: 188 YNVRV----ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 458 --------DDFFQYTEEMNM---------------VRWMRNVISSENPH----RAID--S 488
+D + Y ++ N+ RW R + SEN H A+D
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER-FVHSENQHLVSPEALDFLD 302
Query: 489 KLLGNGYEEQMRLVLKIA----YFCT 510
KLL Y+ Q RL + A YF T
Sbjct: 303 KLL--RYDHQSRLTAREAMEHPYFYT 326
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLM-PDGH 409
L Y I M L+ L H I+HRD+KP NV+ID + + R+ D+GLA+ P
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 410 TRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPF----------- 457
+R+ + + PE + + S D++S G +LA ++ K PF
Sbjct: 188 YNVRV----ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 458 --------DDFFQYTEEMNM---------------VRWMRNVISSENPH----RAID--S 488
+D + Y ++ N+ RW R + SEN H A+D
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER-FVHSENQHLVSPEALDFLD 302
Query: 489 KLLGNGYEEQMRLVLKIA----YFCT 510
KLL Y+ Q RL + A YF T
Sbjct: 303 KLL--RYDHQSRLTAREAMEHPYFYT 326
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 61
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L+ + M G L D + H + G +
Sbjct: 62 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 120
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFG AKL+
Sbjct: 121 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 171
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 172 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLM-PDGH 409
L Y I M L+ L H I+HRD+KP NV+ID + + R+ D+GLA+ P
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 410 TRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPF----------- 457
+R+ + + PE + + S D++S G +LA ++ K PF
Sbjct: 188 YNVRV----ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 458 --------DDFFQYTEEMNM---------------VRWMRNVISSENPH----RAID--S 488
+D + Y ++ N+ RW R + SEN H A+D
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER-FVHSENQHLVSPEALDFLD 302
Query: 489 KLLGNGYEEQMRLVLKIA----YFCT 510
KLL Y+ Q RL + A YF T
Sbjct: 303 KLL--RYDHQSRLTAREAMEHPYFYT 326
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 97/233 (41%), Gaps = 64/233 (27%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
LV+E + N D Q R+ L Y I M L+ L H I+HRD+KP
Sbjct: 111 LVFEHVNNT-------DFKQLRQTL---TDYDIRFYMYEILKALDYCHSMGIMHRDVKPH 160
Query: 385 NVLID-DGMEARISDFGLAKLM-PDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIY 441
NV+ID + + R+ D+GLA+ P +R+ + + PE + + S D++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV----ASRYFKGPELLVDYQMYDYSLDMW 216
Query: 442 SFGVLLAVLVVGKFPF-------------------DDFFQYTEEMNM------------- 469
S G +LA ++ K PF +D + Y ++ N+
Sbjct: 217 SLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRH 276
Query: 470 --VRWMRNVISSENPH----RAID--SKLLGNGYEEQMRLVLKIA----YFCT 510
RW R + SEN H A+D KLL Y+ Q RL + A YF T
Sbjct: 277 SRKRWER-FVHSENQHLVSPEALDFLDKLL--RYDHQSRLTAREAMEHPYFYT 326
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLM-PDGH 409
L Y I M L+ L H I+HRD+KP NV+ID + + R+ D+GLA+ P
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 410 TRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPF----------- 457
+R+ + + PE + + S D++S G +LA ++ K PF
Sbjct: 188 YNVRV----ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 458 --------DDFFQYTEEMNM---------------VRWMRNVISSENPH----RAID--S 488
+D + Y ++ N+ RW R + SEN H A+D
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER-FVHSENQHLVSPEALDFLD 302
Query: 489 KLLGNGYEEQMRLVLKIA----YFCT 510
KLL Y+ Q RL + A YF T
Sbjct: 303 KLL--RYDHQSRLTAREAMEHPYFYT 326
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLM-PDGH 409
L Y I M L+ L H I+HRD+KP NV+ID + + R+ D+GLA+ P
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 410 TRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPF----------- 457
+R+ + + PE + + S D++S G +LA ++ K PF
Sbjct: 188 YNVRV----ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Query: 458 --------DDFFQYTEEMNM---------------VRWMRNVISSENPH----RAID--S 488
+D + Y ++ N+ RW R + SEN H A+D
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER-FVHSENQHLVSPEALDFLD 302
Query: 489 KLLGNGYEEQMRLVLKIA----YFCT 510
KLL Y+ Q RL + A YF T
Sbjct: 303 KLL--RYDHQSRLTAREAMEHPYFYT 326
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 53/208 (25%)
Query: 309 NLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVS-QGRRELDWLARYRIARGMASGLEY 367
N++ ++ + D ++ ++++ S DIL+ +S Q RE M + +
Sbjct: 81 NVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREY-----------MLNLFKA 129
Query: 368 LHMYHRPCIIHRDIKPANVLIDDGMEA-RISDFGLAKLMPDGHT---------------- 410
L H+ I+HRD+KP+N L + ++ + DFGLA+ D
Sbjct: 130 LKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCS 189
Query: 411 ----------RIRITTVAGTTGYVAPEY-----HQTLTISEKSDIYSFGVLLAVLVVGKF 455
R ++ AGT G+ APE +QT I D++S GV+ L+ G++
Sbjct: 190 QNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAI----DMWSAGVIFLSLLSGRY 245
Query: 456 PF----DDFFQYTEEMNMVRWMRNVISS 479
PF DD + M +R R I +
Sbjct: 246 PFYKASDDLTALAQIMT-IRGSRETIQA 272
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++G GA G VYK +P G+ + I P+A EL R +
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 59
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L+ + M G L D + H + G +
Sbjct: 60 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 118
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFG AKL+
Sbjct: 119 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGA 169
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 26/232 (11%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKA-EVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINR 290
+ KE ++++ GA G VYK +P G+ + I P+A EL R +
Sbjct: 11 ILKETEFKKIKVLSSGAFGTVYKGLWIPE--GEKVKI------PVAIKEL---REATSPK 59
Query: 291 KMRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRRE 348
++I E + + ++ L L+ + M G L D + H + G +
Sbjct: 60 ANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQY 118
Query: 349 L-DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPD 407
L +W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 119 LLNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169
Query: 408 GHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLM-PDGH 409
L Y I M L+ L H I+HRD+KP NV+ID + + R+ D+GLA+ P
Sbjct: 126 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 185
Query: 410 TRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPF----------- 457
+R+ + + PE + + S D++S G +LA ++ K PF
Sbjct: 186 YNVRV----ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 241
Query: 458 --------DDFFQYTEEMNM---------------VRWMRNVISSENPH----RAID--S 488
+D + Y ++ N+ RW R + SEN H A+D
Sbjct: 242 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER-FVHSENQHLVSPEALDFLD 300
Query: 489 KLLGNGYEEQMRLVLKIA----YFCT 510
KLL Y+ Q RL + A YF T
Sbjct: 301 KLL--RYDHQSRLTAREAMEHPYFYT 324
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 24/231 (10%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
+ KE ++++ GA G VYK G I + + P+A EL R +
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYK-------GLWIPEGEKVKIPVAIKEL---REATSPKA 67
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRREL 349
++I E + + ++ L L++ + M G L D + H + G + L
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL 126
Query: 350 -DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDG 408
+W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 127 LNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 177
Query: 409 HTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 24/231 (10%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
+ KE ++++G GA G VYK G I + + P+A EL R +
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYK-------GLWIPEGEKVKIPVAIKEL---REATSPKA 67
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRREL 349
++I E + + ++ L L+ + M G L D + H + G + L
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 126
Query: 350 -DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDG 408
+W + +A G+ YL ++HRD+ NVL+ +I+DFG AKL+
Sbjct: 127 LNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 177
Query: 409 HTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 87/206 (42%), Gaps = 54/206 (26%)
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLM-PDGH 409
L Y I M L+ L H I+HRD+KP NV+ID + + R+ D+GLA+ P
Sbjct: 133 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 192
Query: 410 TRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPF----------- 457
+R+ + + PE + + S D++S G +LA ++ K PF
Sbjct: 193 YNVRV----ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 248
Query: 458 --------DDFFQYTEEMNM---------------VRWMRNVISSENPH----RAID--S 488
+D + Y ++ N+ RW R + SEN H A+D
Sbjct: 249 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER-FVHSENQHLVSPEALDFLD 307
Query: 489 KLLGNGYEEQMRLVLKIA----YFCT 510
KLL Y+ Q RL + A YF T
Sbjct: 308 KLL--RYDHQSRLTAREAMEHPYFYT 331
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 24/231 (10%)
Query: 232 LTKEDSLASLEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
+ KE ++++ GA G VYK G I + + P+A EL R +
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYK-------GLWIPEGEKVKIPVAIKEL---REATSPKA 67
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDIL--HDVSQGRREL 349
++I E + + ++ L L+ + M G L D + H + G + L
Sbjct: 68 NKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL 126
Query: 350 -DWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLMPDG 408
+W + +A G+ YL ++HRD+ NVL+ +I+DFGLAKL+
Sbjct: 127 LNWCVQ------IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 177
Query: 409 HTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGV-LLAVLVVGKFPFD 458
++A E + +SD++S+GV + ++ G P+D
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 10/144 (6%)
Query: 317 VTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARY-RIARGMASGLEYLHMYHRPC 375
V + + +LV E G L H G+RE ++ + ++ G++YL +
Sbjct: 78 VCQAEALMLVMEMAGGGPL----HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN--- 130
Query: 376 IIHRDIKPANVLIDDGMEARISDFGLAK-LMPDGHTRIRITTVAGTTGYVAPEYHQTLTI 434
+HRD+ NVL+ + A+ISDFGL+K L D + + APE
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 435 SEKSDIYSFGV-LLAVLVVGKFPF 457
S +SD++S+GV + L G+ P+
Sbjct: 191 SSRSDVWSYGVTMWEALSYGQKPY 214
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 352 LARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLID-DGMEARISDFGLAKLM-PDGH 409
L Y I M L+ L H I+HRD+KP NV+ID + + R+ D+GLA+ P
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 187
Query: 410 TRIRITTVAGTTGYVAPEYHQTLTISEKS-DIYSFGVLLAVLVVGKFPFDDFFQYTEEMN 468
+R+ + + PE + + S D++S G +LA ++ K PF F +
Sbjct: 188 YNVRV----ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF--FHGHDNYDQ 241
Query: 469 MVRWMRNVISSENPHRAID 487
+VR + V+ +E+ + ID
Sbjct: 242 LVR-IAKVLGTEDLYDYID 259
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 28/167 (16%)
Query: 241 LEIIGVGACGVVYKAEVPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRKMRQIKS--- 297
LE IG G G V+KA+ ++ E++ ++RV ++ + S
Sbjct: 7 LEKIGEGTYGTVFKAKNRETH-----------------EIVALKRVRLDDDDEGVPSSAL 49
Query: 298 -EIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDVSQGRRELDWLARYR 356
EI + H+N++ L + LV+EF QD+ +LD
Sbjct: 50 REICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD----QDLKKYFDSCNGDLDPEIVKS 105
Query: 357 IARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAK 403
+ GL + H + ++HRD+KP N+LI+ E +++DFGLA+
Sbjct: 106 FLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 101/246 (41%), Gaps = 64/246 (26%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
LV+E++ N + + L + I M L+ L H I+HRD+KP
Sbjct: 112 LVFEYINNTDFKQLYQ----------ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPH 161
Query: 385 NVLIDDGMEA-RISDFGLAKLM-PDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIY 441
NV+ID + R+ D+GLA+ P +R+ + + PE + + S D++
Sbjct: 162 NVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRV----ASRYFKGPELLVDYQMYDYSLDMW 217
Query: 442 SFGVLLAVLVVGKFPF----DDFFQY--------TEEM---------------------- 467
S G +LA ++ + PF D++ Q TEE+
Sbjct: 218 SLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQH 277
Query: 468 NMVRWMRNVISSENPH----RAID--SKLLGNGYEEQMRLVLKIA----YFCTSDDPEER 517
+ RW N I SEN H A+D KLL Y+ Q RL K A YF + +
Sbjct: 278 SRKRW-ENFIHSENRHLVSPEALDLLDKLL--RYDHQQRLTAKEAMEHPYFYPVVKEQSQ 334
Query: 518 PSSKDV 523
PS+ +
Sbjct: 335 PSADNA 340
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 236 DSLASLEIIGVGACGVVYKAE----VPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
+ + L +G G+ G+VY+ + G +A+K +++ + +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE------------SASLRER 64
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDV------SQG 345
+ + + G H +++ L V++ L+V E M +G L+ L + + G
Sbjct: 65 IEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 346 RRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM 405
R ++A +A G+ YL+ +HRD+ N ++ +I DFG+ + +
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 406 PDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL 447
+ + ++APE + + SD++SFGV+L
Sbjct: 181 YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 17/136 (12%)
Query: 325 LVYEFMKNGSLQDILHDVSQGRRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPA 384
L++E++ N + + ++ D+ RY I + L+Y H I+HRD+KP
Sbjct: 105 LIFEYVNNTDFKVLYPTLT------DYDIRYYIYE-LLKALDYCH---SQGIMHRDVKPH 154
Query: 385 NVLIDDGM-EARISDFGLAKLM-PDGHTRIRITTVAGTTGYVAPEYHQTLTISEKS-DIY 441
NV+ID + + R+ D+GLA+ P +R+ + + PE L + S D++
Sbjct: 155 NVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV----ASRYFKGPELLVDLQDYDYSLDMW 210
Query: 442 SFGVLLAVLVVGKFPF 457
S G + A ++ K PF
Sbjct: 211 SLGCMFAGMIFRKEPF 226
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 94/222 (42%), Gaps = 26/222 (11%)
Query: 236 DSLASLEIIGVGACGVVYKAE----VPGSYGKMIAIKKIDQPPMAATELLNVRRVLINRK 291
+ + L +G G+ G+VY+ + G +A+K +++ + +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE------------SASLRER 64
Query: 292 MRQIKSEIITAGRIWHRNLLPLQAHVTRPDCHLLVYEFMKNGSLQDILHDV------SQG 345
+ + + G H +++ L V++ L+V E M +G L+ L + + G
Sbjct: 65 IEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPG 123
Query: 346 RRELDWLARYRIARGMASGLEYLHMYHRPCIIHRDIKPANVLIDDGMEARISDFGLAKLM 405
R ++A +A G+ YL+ +HRD+ N ++ +I DFG+ + +
Sbjct: 124 RPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 406 PDGHTRIRITTVAGTTGYVAPEYHQTLTISEKSDIYSFGVLL 447
+ + ++APE + + SD++SFGV+L
Sbjct: 181 YETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL 222
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,705,179
Number of Sequences: 62578
Number of extensions: 580787
Number of successful extensions: 3557
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 179
Number of HSP's that attempted gapping in prelim test: 1476
Number of HSP's gapped (non-prelim): 1159
length of query: 532
length of database: 14,973,337
effective HSP length: 103
effective length of query: 429
effective length of database: 8,527,803
effective search space: 3658427487
effective search space used: 3658427487
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)