Query         037085
Match_columns 248
No_of_seqs    203 out of 4226
Neff          10.4
Searched_HMMs 46136
Date          Fri Mar 29 08:30:44 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037085.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037085hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG4412 26S proteasome regulat 100.0 9.7E-39 2.1E-43  226.9   9.0  181    3-199    24-205 (226)
  2 PHA02791 ankyrin-like protein; 100.0 8.3E-32 1.8E-36  214.4  16.5  176   10-207    24-201 (284)
  3 KOG4412 26S proteasome regulat 100.0 1.1E-32 2.4E-37  196.1   8.9  176   15-207     2-179 (226)
  4 PHA02791 ankyrin-like protein; 100.0 6.6E-31 1.4E-35  209.2  16.8  163   15-197    60-225 (284)
  5 PHA02875 ankyrin repeat protei 100.0   4E-31 8.8E-36  223.9  16.5  180    9-205    28-207 (413)
  6 PHA02874 ankyrin repeat protei 100.0 2.2E-30 4.7E-35  220.6  15.9  188    2-207    21-230 (434)
  7 KOG0509 Ankyrin repeat and DHH 100.0 3.6E-31 7.9E-36  220.7  10.6  181    6-205    68-250 (600)
  8 PHA02878 ankyrin repeat protei 100.0 9.1E-30   2E-34  219.1  15.7  182   10-207    31-276 (477)
  9 PHA03100 ankyrin repeat protei 100.0 1.9E-29 4.2E-34  217.6  15.4  180   10-208   100-291 (480)
 10 PHA02875 ankyrin repeat protei 100.0 3.1E-29 6.8E-34  212.4  15.5  170    9-195    61-231 (413)
 11 PHA02859 ankyrin repeat protei 100.0 8.9E-29 1.9E-33  190.1  16.1  181    7-208    12-200 (209)
 12 PHA02946 ankyin-like protein;  100.0   3E-29 6.5E-34  212.8  14.6  184    7-208    63-250 (446)
 13 PHA02878 ankyrin repeat protei 100.0 4.5E-29 9.7E-34  214.8  15.2  157   31-208   149-308 (477)
 14 PHA02874 ankyrin repeat protei 100.0 9.5E-29 2.1E-33  210.5  15.6  180    9-208   117-296 (434)
 15 PHA03100 ankyrin repeat protei 100.0 1.7E-28 3.7E-33  211.7  14.4  170    7-194   132-311 (480)
 16 PHA02716 CPXV016; CPX019; EVM0 100.0 2.9E-28 6.2E-33  214.1  15.4  182    9-205   169-404 (764)
 17 KOG0509 Ankyrin repeat and DHH 100.0 1.1E-28 2.5E-33  205.8  12.2  174   17-208    45-220 (600)
 18 PHA02798 ankyrin-like protein; 100.0 4.8E-28   1E-32  208.9  14.8  190    6-208    61-299 (489)
 19 PHA02795 ankyrin-like protein; 100.0 2.4E-27 5.3E-32  196.0  15.5  171   11-196   111-292 (437)
 20 PHA02798 ankyrin-like protein; 100.0 1.8E-27 3.8E-32  205.4  14.7  177    6-194    99-319 (489)
 21 PHA03095 ankyrin-like protein; 100.0 2.1E-27 4.6E-32  204.4  15.1  190    6-208    73-298 (471)
 22 PHA02716 CPXV016; CPX019; EVM0 100.0 1.5E-27 3.2E-32  209.7  13.8  174    5-192   201-429 (764)
 23 PHA02989 ankyrin repeat protei  99.9 2.4E-27 5.3E-32  204.8  14.9  170    9-189   101-312 (494)
 24 PHA02859 ankyrin repeat protei  99.9 5.4E-27 1.2E-31  180.2  15.0  150    9-172    44-202 (209)
 25 PHA03095 ankyrin-like protein;  99.9 3.3E-27 7.1E-32  203.3  15.3  183    6-205    37-227 (471)
 26 PHA02876 ankyrin repeat protei  99.9 5.5E-27 1.2E-31  209.9  15.9  186    5-207   167-382 (682)
 27 KOG0510 Ankyrin repeat protein  99.9 4.3E-27 9.2E-32  200.7  14.0  178    7-198   216-409 (929)
 28 PHA02876 ankyrin repeat protei  99.9 4.9E-27 1.1E-31  210.3  15.0  179   10-206   301-482 (682)
 29 PHA02989 ankyrin repeat protei  99.9 1.1E-26 2.4E-31  200.7  15.3  181   15-208    68-297 (494)
 30 PHA02946 ankyin-like protein;   99.9   1E-26 2.2E-31  197.4  14.7  169    6-192    95-269 (446)
 31 PLN03192 Voltage-dependent pot  99.9 5.3E-26 1.2E-30  206.5  16.7  171   13-203   522-692 (823)
 32 KOG0508 Ankyrin repeat protein  99.9 9.5E-27 2.1E-31  187.9   8.9  166   13-195    39-212 (615)
 33 KOG0508 Ankyrin repeat protein  99.9 3.9E-26 8.5E-31  184.4  10.6  156   13-187    81-236 (615)
 34 KOG0510 Ankyrin repeat protein  99.9 4.2E-26 9.1E-31  194.6  11.0  153    6-168   263-416 (929)
 35 KOG0514 Ankyrin repeat protein  99.9 1.3E-25 2.8E-30  176.1  10.9  164    9-188   261-429 (452)
 36 PHA02917 ankyrin-like protein;  99.9 3.4E-25 7.3E-30  195.2  14.2  184    8-208    24-237 (661)
 37 KOG4177 Ankyrin [Cell wall/mem  99.9 9.6E-26 2.1E-30  202.3   6.7  187    8-207   399-613 (1143)
 38 PHA02741 hypothetical protein;  99.9 1.4E-23 3.1E-28  156.2  14.0  133   45-193    16-159 (169)
 39 PHA02743 Viral ankyrin protein  99.9 1.2E-23 2.7E-28  155.9  13.2  140   44-200    14-162 (166)
 40 KOG0502 Integral membrane anky  99.9   5E-24 1.1E-28  156.6  10.3  166   13-199   126-291 (296)
 41 PHA02743 Viral ankyrin protein  99.9   2E-23 4.3E-28  154.8  13.2  141    9-163    13-162 (166)
 42 PHA02795 ankyrin-like protein;  99.9 2.1E-23 4.5E-28  172.8  13.4  175   22-210    83-264 (437)
 43 PHA02741 hypothetical protein;  99.9 2.7E-23 5.9E-28  154.7  12.7  133    7-147    12-156 (169)
 44 PLN03192 Voltage-dependent pot  99.9 1.9E-23 4.2E-28  189.9  14.0  149    7-171   549-698 (823)
 45 PHA02730 ankyrin-like protein;  99.9 5.6E-23 1.2E-27  177.9  14.8  193    9-206    34-241 (672)
 46 KOG0502 Integral membrane anky  99.9 2.5E-24 5.4E-29  158.2   5.4  179    3-201    83-261 (296)
 47 PHA02917 ankyrin-like protein;  99.9 4.9E-23 1.1E-27  181.6  14.2  168    7-193    59-257 (661)
 48 KOG4177 Ankyrin [Cell wall/mem  99.9 1.3E-23 2.8E-28  188.8  10.5  169    6-192   464-632 (1143)
 49 PHA02884 ankyrin repeat protei  99.9 1.6E-22 3.5E-27  161.3  15.2  157    9-191    25-187 (300)
 50 PHA02730 ankyrin-like protein;  99.9 7.6E-23 1.7E-27  177.1  14.0  186    5-207   224-503 (672)
 51 PHA02736 Viral ankyrin protein  99.9 9.5E-23 2.1E-27  149.7  10.0  135    7-148     8-151 (154)
 52 PHA02736 Viral ankyrin protein  99.9 1.3E-22 2.9E-27  148.9  10.3  132   44-193    11-153 (154)
 53 KOG0512 Fetal globin-inducing   99.9 7.1E-22 1.5E-26  140.2  12.1  142   19-172    66-208 (228)
 54 TIGR00870 trp transient-recept  99.9 1.7E-21 3.7E-26  176.1  12.7  171    7-194    43-245 (743)
 55 PHA02792 ankyrin-like protein;  99.8 2.9E-20 6.2E-25  159.7  15.6  182    8-207   167-450 (631)
 56 KOG0195 Integrin-linked kinase  99.8 2.1E-21 4.5E-26  148.5   7.3  153   24-193     8-160 (448)
 57 KOG0505 Myosin phosphatase, re  99.8 1.9E-20 4.1E-25  154.0  11.9  174   10-201    67-266 (527)
 58 KOG0505 Myosin phosphatase, re  99.8 1.2E-20 2.5E-25  155.1  10.1  153    5-171    95-273 (527)
 59 KOG0507 CASK-interacting adapt  99.8   9E-21   2E-25  161.2   8.9  184    4-199    37-222 (854)
 60 TIGR00870 trp transient-recept  99.8 7.5E-20 1.6E-24  165.4  11.8  178   14-209    15-217 (743)
 61 PHA02884 ankyrin repeat protei  99.8 1.5E-19 3.3E-24  144.3  12.0  126   44-186    26-157 (300)
 62 KOG0512 Fetal globin-inducing   99.8 1.3E-19 2.8E-24  128.8   9.6  119   54-187    67-185 (228)
 63 KOG3676 Ca2+-permeable cation   99.8 3.2E-19 6.9E-24  153.3  13.0  165    9-188   136-330 (782)
 64 KOG0514 Ankyrin repeat protein  99.8 1.1E-19 2.4E-24  143.0   9.1  186   28-237   238-438 (452)
 65 KOG0507 CASK-interacting adapt  99.8 1.1E-19 2.4E-24  154.7   8.9  187    2-201    68-256 (854)
 66 KOG0195 Integrin-linked kinase  99.8 3.7E-19 8.1E-24  136.3   9.2  135    6-148    24-158 (448)
 67 PHA02792 ankyrin-like protein;  99.8 5.4E-18 1.2E-22  145.8  15.4  161   17-193   307-480 (631)
 68 cd00204 ANK ankyrin repeats;    99.8 3.8E-18 8.2E-23  120.2  12.2  125   11-143     2-126 (126)
 69 PF12796 Ank_2:  Ankyrin repeat  99.8 2.3E-18   5E-23  114.5   9.9   83   54-147     1-83  (89)
 70 cd00204 ANK ankyrin repeats;    99.8 1.3E-17 2.8E-22  117.4  12.1  123   46-185     3-125 (126)
 71 PF12796 Ank_2:  Ankyrin repeat  99.8 6.8E-18 1.5E-22  112.2   9.1   84   20-109     1-84  (89)
 72 KOG4214 Myotrophin and similar  99.7 1.9E-16 4.1E-21  101.0   9.2  103   53-169     5-107 (117)
 73 KOG4369 RTK signaling protein   99.7 1.5E-16 3.2E-21  140.6   9.6  178   11-205   752-931 (2131)
 74 KOG3676 Ca2+-permeable cation   99.7 1.1E-15 2.4E-20  131.9  12.8  184    2-192   166-390 (782)
 75 COG0666 Arp FOG: Ankyrin repea  99.7 1.1E-15 2.5E-20  118.6  11.5  129   11-146    68-203 (235)
 76 COG0666 Arp FOG: Ankyrin repea  99.7 3.5E-15 7.5E-20  115.8  13.7  130   44-189    67-203 (235)
 77 KOG4214 Myotrophin and similar  99.6 8.9E-15 1.9E-19   93.4   9.1  104   17-129     3-106 (117)
 78 KOG4369 RTK signaling protein   99.5 4.6E-15   1E-19  131.4   4.6  135    6-147   780-916 (2131)
 79 PF13637 Ank_4:  Ankyrin repeat  99.5 3.3E-14 7.2E-19   84.9   6.6   54   16-70      1-54  (54)
 80 PF13857 Ank_5:  Ankyrin repeat  99.5 8.4E-15 1.8E-19   88.0   3.9   48  116-169     9-56  (56)
 81 PTZ00322 6-phosphofructo-2-kin  99.5 8.1E-14 1.7E-18  124.1   9.2  111   53-170    85-196 (664)
 82 PF13637 Ank_4:  Ankyrin repeat  99.5 7.1E-14 1.5E-18   83.4   5.9   53   84-142     1-53  (54)
 83 PF13857 Ank_5:  Ankyrin repeat  99.5   3E-14 6.6E-19   85.5   3.4   50   75-130     7-56  (56)
 84 PTZ00322 6-phosphofructo-2-kin  99.5 1.5E-13 3.3E-18  122.4   9.2  105   19-131    85-196 (664)
 85 KOG0515 p53-interacting protei  99.5 2.2E-13 4.8E-18  112.4   8.6  126   50-189   547-675 (752)
 86 KOG1710 MYND Zn-finger and ank  99.5 6.3E-13 1.4E-17  102.2  10.0  124   15-145    11-134 (396)
 87 KOG0515 p53-interacting protei  99.4 1.4E-12   3E-17  107.8   8.1  118   20-144   554-673 (752)
 88 KOG1710 MYND Zn-finger and ank  99.4 5.7E-12 1.2E-16   97.0  10.0  120   50-185    12-131 (396)
 89 KOG0506 Glutaminase (contains   99.0   2E-10 4.4E-15   94.1   4.8   93   13-106   503-595 (622)
 90 KOG0506 Glutaminase (contains   99.0 4.7E-10   1E-14   92.0   5.2   98   82-194   504-601 (622)
 91 KOG0783 Uncharacterized conser  98.9 5.1E-10 1.1E-14   97.5   3.7   89    5-94     41-129 (1267)
 92 KOG0783 Uncharacterized conser  98.9 8.5E-10 1.8E-14   96.1   4.9   89   71-171    39-128 (1267)
 93 KOG0782 Predicted diacylglycer  98.9 5.7E-09 1.2E-13   87.6   9.2  119   20-145   870-989 (1004)
 94 PF13962 PGG:  Domain of unknow  98.9 1.1E-09 2.4E-14   75.6   3.6   37  209-245     1-37  (113)
 95 KOG0818 GTPase-activating prot  98.9 5.6E-09 1.2E-13   86.2   8.1   88   87-190   136-224 (669)
 96 PF13606 Ank_3:  Ankyrin repeat  98.8 3.5E-09 7.5E-14   54.5   3.2   26  122-147     1-26  (30)
 97 PF00023 Ank:  Ankyrin repeat H  98.8 5.9E-09 1.3E-13   55.1   3.9   33  122-160     1-33  (33)
 98 KOG0782 Predicted diacylglycer  98.8 1.5E-08 3.1E-13   85.2   7.5  119   55-188   871-989 (1004)
 99 KOG0818 GTPase-activating prot  98.8 3.5E-08 7.5E-13   81.6   8.0   87   19-106   136-222 (669)
100 PF13606 Ank_3:  Ankyrin repeat  98.7 1.9E-08 4.2E-13   51.7   3.4   28   15-42      1-28  (30)
101 KOG0522 Ankyrin repeat protein  98.6 1.6E-07 3.4E-12   78.5   7.5   89   52-146    22-111 (560)
102 PF00023 Ank:  Ankyrin repeat H  98.6 5.9E-08 1.3E-12   51.2   3.2   26   84-109     2-27  (33)
103 KOG0522 Ankyrin repeat protein  98.6 1.1E-07 2.3E-12   79.5   6.1  112   18-146    22-134 (560)
104 KOG0705 GTPase-activating prot  98.5 1.9E-07 4.2E-12   78.7   6.7   95   88-194   628-722 (749)
105 KOG0705 GTPase-activating prot  98.5 2.3E-07 5.1E-12   78.2   7.2   89   54-148   628-719 (749)
106 KOG0520 Uncharacterized conser  98.5 1.1E-07 2.3E-12   85.4   3.5  132   11-144   569-701 (975)
107 KOG0521 Putative GTPase activa  98.4 2.8E-07 6.1E-12   82.8   4.5   79   82-172   654-732 (785)
108 KOG3609 Receptor-activated Ca2  98.4 1.2E-06 2.6E-11   77.3   7.9  131   52-199    27-164 (822)
109 KOG3609 Receptor-activated Ca2  98.3 1.4E-06 3.1E-11   76.8   7.2  127   14-148    23-156 (822)
110 KOG0520 Uncharacterized conser  98.3 6.7E-07 1.4E-11   80.4   4.5  131   46-187   570-701 (975)
111 KOG2384 Major histocompatibili  98.3 3.3E-06 7.1E-11   61.8   6.8   73  115-196     4-76  (223)
112 KOG0511 Ankyrin repeat protein  98.2   5E-06 1.1E-10   67.1   6.2   71   17-89     37-107 (516)
113 KOG0521 Putative GTPase activa  98.2   3E-06 6.5E-11   76.4   5.4   88   48-142   654-741 (785)
114 KOG0511 Ankyrin repeat protein  98.1 1.3E-05 2.8E-10   64.7   7.5   82   53-145    39-121 (516)
115 KOG2384 Major histocompatibili  98.0 1.4E-05 2.9E-10   58.7   5.5   64    9-72      5-68  (223)
116 KOG2505 Ankyrin repeat protein  97.6 0.00011 2.3E-09   61.6   5.5   78   96-186   403-480 (591)
117 smart00248 ANK ankyrin repeats  97.0  0.0016 3.4E-08   31.9   3.6   25   16-40      2-26  (30)
118 smart00248 ANK ankyrin repeats  96.9  0.0018 3.9E-08   31.6   3.3   26  122-147     1-26  (30)
119 PF06128 Shigella_OspC:  Shigel  96.7    0.02 4.4E-07   43.6   8.6   50  135-193   229-281 (284)
120 KOG2505 Ankyrin repeat protein  96.2  0.0062 1.4E-07   51.4   4.0   63   29-92    404-471 (591)
121 PF03158 DUF249:  Multigene fam  95.6    0.39 8.3E-06   35.7  10.7  137   17-187    47-191 (192)
122 PF03158 DUF249:  Multigene fam  94.6    0.14 3.1E-06   37.8   6.1  112   14-144    74-191 (192)
123 PF11929 DUF3447:  Domain of un  94.4   0.095 2.1E-06   33.1   4.3   46   19-72      9-54  (76)
124 PF11929 DUF3447:  Domain of un  93.3    0.23 5.1E-06   31.3   4.6   48   51-106     7-54  (76)
125 PF06128 Shigella_OspC:  Shigel  91.6    0.81 1.8E-05   35.2   6.2  120   17-148   154-279 (284)
126 PF04053 Coatomer_WDAD:  Coatom  59.6      34 0.00073   29.8   6.3  111   49-190   320-430 (443)
127 KOG0292 Vesicle coat complex C  53.4      89  0.0019   29.7   7.9   58   47-109   643-700 (1202)
128 KOG4591 Uncharacterized conser  42.4      19 0.00042   27.3   1.9   51  119-171   218-269 (280)
129 KOG1709 Guanidinoacetate methy  34.1      34 0.00073   26.6   2.1   43  142-194     1-43  (271)
130 KOG4591 Uncharacterized conser  33.6      25 0.00054   26.7   1.3   54   80-135   218-272 (280)
131 KOG0513 Ca2+-independent phosp  29.7      19 0.00042   31.7   0.2  115   11-136    50-182 (503)
132 PF11995 DUF3490:  Domain of un  25.3      55  0.0012   23.8   1.8   59  180-238    95-161 (161)
133 cd07920 Pumilio Pumilio-family  20.9 4.6E+02  0.0099   21.3  12.5  175   11-188   124-305 (322)

No 1  
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=9.7e-39  Score=226.92  Aligned_cols=181  Identities=27%  Similarity=0.347  Sum_probs=161.9

Q ss_pred             ccCc-hhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhc
Q 037085            3 RLWP-QLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLT   81 (248)
Q Consensus         3 ~~~~-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~   81 (248)
                      ...| ++....|.+|+|||||||+.|+.+++.+|++.-....+.+|..|+||||+||..|+.++|+.|+.+.+.+++..+
T Consensus        24 ~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~t  103 (226)
T KOG4412|consen   24 QSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATT  103 (226)
T ss_pred             hcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceec
Confidence            3445 444455669999999999999999999999754444477899999999999999999999999998666799999


Q ss_pred             cCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCC
Q 037085           82 SNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQ  161 (248)
Q Consensus        82 ~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~  161 (248)
                      ..|+||||+|+..|..+|+++|+++|+.      ++.+|..|.||||-|+..|+.+++++|+..|+      .+|..|+.
T Consensus       104 n~G~T~LHyAagK~r~eIaqlLle~ga~------i~~kD~~~qtplHRAAavGklkvie~Li~~~a------~~n~qDk~  171 (226)
T KOG4412|consen  104 NGGQTCLHYAAGKGRLEIAQLLLEKGAL------IRIKDKQGQTPLHRAAAVGKLKVIEYLISQGA------PLNTQDKY  171 (226)
T ss_pred             CCCcceehhhhcCChhhHHHHHHhcCCC------CcccccccCchhHHHHhccchhhHHHHHhcCC------CCCccccc
Confidence            9999999999999999999999999988      89999999999999999999999999999998      79999999


Q ss_pred             CCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCC
Q 037085          162 GQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDA  199 (248)
Q Consensus       162 g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~  199 (248)
                      |+||||.|..-    ++.++...|.++||+....+..+
T Consensus       172 G~TpL~~al~e----~~~d~a~lLV~~gAd~~~edke~  205 (226)
T KOG4412|consen  172 GFTPLHHALAE----GHPDVAVLLVRAGADTDREDKEG  205 (226)
T ss_pred             CccHHHHHHhc----cCchHHHHHHHhccceeeccccC
Confidence            99999999543    58889999999999988877643


No 2  
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=8.3e-32  Score=214.39  Aligned_cols=176  Identities=15%  Similarity=0.151  Sum_probs=133.2

Q ss_pred             hhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHH
Q 037085           10 SIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALH   89 (248)
Q Consensus        10 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh   89 (248)
                      +.+|.+|.||||+|+..|+.+++++|++.++.. +..  +|.||||+|+..|+.+++++|++.+ .+++.+|..|+||||
T Consensus        24 ~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~-n~~--d~~TpLh~Aa~~g~~eiV~lLL~~G-advn~~d~~G~TpLh   99 (284)
T PHA02791         24 FKADVHGHSALYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVKILLFSG-MDDSQFDDKGNTALY   99 (284)
T ss_pred             CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCC-cCC--CCCCHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCHHH
Confidence            356888999999999999999999999888766 333  4678899888888888888888874 457778888888888


Q ss_pred             HHHHcCChHHHHHHHHHHhccccccccccccCCC-CcHhHHHHhCCcHHHHHHHHhhcccccccccccccC-CCCCCHHH
Q 037085           90 LAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEG-NTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVN-KQGQTALQ  167 (248)
Q Consensus        90 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g-~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~-~~g~tpl~  167 (248)
                      +|+..|+.+++++|+++|++      ++.++..| .||||+|+..|+.+++++|++++++      .  .| ..|.||||
T Consensus       100 ~Aa~~g~~eivk~Ll~~gad------in~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~------~--~d~~~g~TpLh  165 (284)
T PHA02791        100 YAVDSGNMQTVKLFVKKNWR------LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS------T--FDLAILLSCIH  165 (284)
T ss_pred             HHHHcCCHHHHHHHHHCCCC------cCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCc------c--cccccCccHHH
Confidence            88888888888888888877      66667666 4788888888888888888776541      1  12 24678888


Q ss_pred             HHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccccc
Q 037085          168 LCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWN  207 (248)
Q Consensus       168 ~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~  207 (248)
                      +|+..    ++.+++++|+++|++++.....+...+++++
T Consensus       166 ~Aa~~----g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~A  201 (284)
T PHA02791        166 ITIKN----GHVDMMILLLDYMTSTNTNNSLLFIPDIKLA  201 (284)
T ss_pred             HHHHc----CCHHHHHHHHHCCCCCCcccCCCCChHHHHH
Confidence            88776    6777888888888777766655544345443


No 3  
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.98  E-value=1.1e-32  Score=196.10  Aligned_cols=176  Identities=19%  Similarity=0.152  Sum_probs=158.3

Q ss_pred             CCCCHHHHHHhCCCHHHHHHHHhcCcchhhhh-cCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHH
Q 037085           15 RGETTMHLLSTDGDARMVRIFGENNRELCLEV-DNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVK   93 (248)
Q Consensus        15 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~   93 (248)
                      .+.++.+.+|......-++.+++..+..++.+ |.+|+||||+||..|+.+++.+|+++-...++.+|..|+||||+|+.
T Consensus         2 e~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s   81 (226)
T KOG4412|consen    2 EYASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAAS   81 (226)
T ss_pred             CccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhh
Confidence            35678888898888888999999988444555 44999999999999999999999987566788889999999999999


Q ss_pred             cCChHHHHHHHHH-HhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHc
Q 037085           94 KSRSDAFQALVDE-AKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNAN  172 (248)
Q Consensus        94 ~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~  172 (248)
                      .|+.++++.|+.+ |++      +|..++.|.|+||||+..|..+++.+|++.|+      .++.+|..|+||||.|+.-
T Consensus        82 ~g~~evVk~Ll~r~~ad------vna~tn~G~T~LHyAagK~r~eIaqlLle~ga------~i~~kD~~~qtplHRAAav  149 (226)
T KOG4412|consen   82 NGNDEVVKELLNRSGAD------VNATTNGGQTCLHYAAGKGRLEIAQLLLEKGA------LIRIKDKQGQTPLHRAAAV  149 (226)
T ss_pred             cCcHHHHHHHhcCCCCC------cceecCCCcceehhhhcCChhhHHHHHHhcCC------CCcccccccCchhHHHHhc
Confidence            9999999999998 777      99999999999999999999999999999998      7899999999999999876


Q ss_pred             CCCchHHHHHHHHHHhhhhcCCCCCCCCCcccccc
Q 037085          173 SQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWN  207 (248)
Q Consensus       173 ~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~  207 (248)
                          +..+++++|+..|+..+.++..+.+ |++.+
T Consensus       150 ----Gklkvie~Li~~~a~~n~qDk~G~T-pL~~a  179 (226)
T KOG4412|consen  150 ----GKLKVIEYLISQGAPLNTQDKYGFT-PLHHA  179 (226)
T ss_pred             ----cchhhHHHHHhcCCCCCcccccCcc-HHHHH
Confidence                8999999999999999999988877 66644


No 4  
>PHA02791 ankyrin-like protein; Provisional
Probab=99.97  E-value=6.6e-31  Score=209.24  Aligned_cols=163  Identities=18%  Similarity=0.075  Sum_probs=147.3

Q ss_pred             CCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCC-CcHHHHHHH
Q 037085           15 RGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNG-ETALHLAVK   93 (248)
Q Consensus        15 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g-~t~lh~a~~   93 (248)
                      +|.||||+|+..|+.+++++|++.++++ +.+|..|.||||+|+..|+.+++++|++.+. .++.++..| .||||+|+.
T Consensus        60 d~~TpLh~Aa~~g~~eiV~lLL~~Gadv-n~~d~~G~TpLh~Aa~~g~~eivk~Ll~~ga-din~~~~~g~~TpL~~Aa~  137 (284)
T PHA02791         60 ENEFPLHQAATLEDTKIVKILLFSGMDD-SQFDDKGNTALYYAVDSGNMQTVKLFVKKNW-RLMFYGKTGWKTSFYHAVM  137 (284)
T ss_pred             CCCCHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CcCccCCCCCcHHHHHHHH
Confidence            5799999999999999999999999988 7889999999999999999999999999854 467777777 489999999


Q ss_pred             cCChHHHHHHHHHHhcccccccccccc-CCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCH-HHHHHH
Q 037085           94 KSRSDAFQALVDEAKSHRKEHLFTWKD-KEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTA-LQLCNA  171 (248)
Q Consensus        94 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tp-l~~a~~  171 (248)
                      .|+.+++++|++++..        ..| ..|.||||+|+..|+.+++++|+++|+      +++.+|..|.|| ||+|+.
T Consensus       138 ~g~~eivk~LL~~~~~--------~~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gA------d~n~~d~~g~t~~L~~Aa~  203 (284)
T PHA02791        138 LNDVSIVSYFLSEIPS--------TFDLAILLSCIHITIKNGHVDMMILLLDYMT------STNTNNSLLFIPDIKLAID  203 (284)
T ss_pred             cCCHHHHHHHHhcCCc--------ccccccCccHHHHHHHcCCHHHHHHHHHCCC------CCCcccCCCCChHHHHHHH
Confidence            9999999999987543        123 358999999999999999999999998      889999999987 999998


Q ss_pred             cCCCchHHHHHHHHHHhhhhcCCCCC
Q 037085          172 NSQDSVFKEIGWIIQRAVAQQSPQLP  197 (248)
Q Consensus       172 ~~~~~~~~~i~~~L~~~g~~~~~~~~  197 (248)
                      .    ++.+++++|+++|++++....
T Consensus       204 ~----~~~e~v~lLl~~Ga~in~~~~  225 (284)
T PHA02791        204 N----KDLEMLQALFKYDINIYSVNL  225 (284)
T ss_pred             c----CCHHHHHHHHHCCCCCccCcc
Confidence            8    789999999999999988766


No 5  
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.97  E-value=4e-31  Score=223.89  Aligned_cols=180  Identities=18%  Similarity=0.154  Sum_probs=158.4

Q ss_pred             HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHH
Q 037085            9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETAL   88 (248)
Q Consensus         9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l   88 (248)
                      .+..+..|.||||+|+..|+.+++++|++.|..+ +..+..+.||||.|+..|+.+++++|++.+....+..+..|.|||
T Consensus        28 ~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL  106 (413)
T PHA02875         28 PNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIP-DVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPL  106 (413)
T ss_pred             CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-cccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHH
Confidence            4556778999999999999999999999999887 666788899999999999999999999987665566677899999


Q ss_pred             HHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHH
Q 037085           89 HLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQL  168 (248)
Q Consensus        89 h~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~  168 (248)
                      |+|+..++.+++++|+++|++      ++.++..|.||||+|+..|+.+++++|+++|+      +++.+|..|.||||+
T Consensus       107 ~~A~~~~~~~iv~~Ll~~gad------~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~------~~~~~d~~g~TpL~~  174 (413)
T PHA02875        107 HLATILKKLDIMKLLIARGAD------PDIPNTDKFSPLHLAVMMGDIKGIELLIDHKA------CLDIEDCCGCTPLII  174 (413)
T ss_pred             HHHHHhCCHHHHHHHHhCCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCC------CCCCCCCCCCCHHHH
Confidence            999999999999999999988      78888999999999999999999999999987      788899999999999


Q ss_pred             HHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccc
Q 037085          169 CNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVS  205 (248)
Q Consensus       169 a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~  205 (248)
                      |+..    ++.+++++|+++|++++.....+..++++
T Consensus       175 A~~~----g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~  207 (413)
T PHA02875        175 AMAK----GDIAICKMLLDSGANIDYFGKNGCVAALC  207 (413)
T ss_pred             HHHc----CCHHHHHHHHhCCCCCCcCCCCCCchHHH
Confidence            9987    67899999999999998877776655555


No 6  
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.97  E-value=2.2e-30  Score=220.56  Aligned_cols=188  Identities=16%  Similarity=0.206  Sum_probs=166.2

Q ss_pred             cccCchhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCch------
Q 037085            2 ARLWPQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPE------   75 (248)
Q Consensus         2 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~------   75 (248)
                      ++..+..++..+.+|.||||.|+..|+.+++++|++.|+++ +..+..|.||||.|+..|+.+++++|++.+.+      
T Consensus        21 l~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~-n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~   99 (434)
T PHA02874         21 IKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADI-NHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPI   99 (434)
T ss_pred             HHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchh
Confidence            34556667778889999999999999999999999999988 77888999999999999999999999987532      


Q ss_pred             ----------------hhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHH
Q 037085           76 ----------------SLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIV  139 (248)
Q Consensus        76 ----------------~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v  139 (248)
                                      +++.++..|.||||+|+..|+.+++++|+++|++      ++.+|..|.||||+|+..++.+++
T Consensus       100 ~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad------~n~~d~~g~tpLh~A~~~~~~~iv  173 (434)
T PHA02874        100 PCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGAD------VNIEDDNGCYPIHIAIKHNFFDII  173 (434)
T ss_pred             ccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCC------CCCcCCCCCCHHHHHHHCCcHHHH
Confidence                            2456778899999999999999999999999988      888999999999999999999999


Q ss_pred             HHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccccc
Q 037085          140 ELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWN  207 (248)
Q Consensus       140 ~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~  207 (248)
                      ++|++.|+      +++..+..|.||||+|+..    +..+++++|++.|+++......+.+ |++.+
T Consensus       174 ~~Ll~~g~------~~n~~~~~g~tpL~~A~~~----g~~~iv~~Ll~~g~~i~~~~~~g~T-pL~~A  230 (434)
T PHA02874        174 KLLLEKGA------YANVKDNNGESPLHNAAEY----GDYACIKLLIDHGNHIMNKCKNGFT-PLHNA  230 (434)
T ss_pred             HHHHHCCC------CCCCCCCCCCCHHHHHHHc----CCHHHHHHHHhCCCCCcCCCCCCCC-HHHHH
Confidence            99999998      7888999999999999988    7899999999999998777665444 66544


No 7  
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97  E-value=3.6e-31  Score=220.67  Aligned_cols=181  Identities=17%  Similarity=0.188  Sum_probs=161.8

Q ss_pred             chhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhc-CCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCC
Q 037085            6 PQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVD-NSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNG   84 (248)
Q Consensus         6 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g   84 (248)
                      .+.++..|.+|-|+||||+.+++.+++++|+++++++ +... ..+.||||+|+++|+..++++|+++| .++..+|.+|
T Consensus        68 g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadv-n~~gG~l~stPLHWAar~G~~~vv~lLlqhG-Adpt~~D~~G  145 (600)
T KOG0509|consen   68 GESVNNPDREGVTLLHWAAINNRLDVARYLISHGADV-NAIGGVLGSTPLHWAARNGHISVVDLLLQHG-ADPTLKDKQG  145 (600)
T ss_pred             CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCc-cccCCCCCCCcchHHHHcCcHHHHHHHHHcC-CCCceecCCC
Confidence            5567788999999999999999999999999999999 5555 78999999999999999999999995 5689999999


Q ss_pred             CcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccC-CCCC
Q 037085           85 ETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVN-KQGQ  163 (248)
Q Consensus        85 ~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~-~~g~  163 (248)
                      .+|+|+|+..++.-++-+|+.++++      ++.+|.+|+||||+|+.+|....++.|++.|+      .++.+| ..|.
T Consensus       146 ~~~lHla~~~~~~~~vayll~~~~d------~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a------~~~~~d~~~g~  213 (600)
T KOG0509|consen  146 LTPLHLAAQFGHTALVAYLLSKGAD------IDLRDNNGRTPLMWAAYKGFALFVRRLLKFGA------SLLLTDDNHGN  213 (600)
T ss_pred             CcHHHHHHHhCchHHHHHHHHhccc------CCCcCCCCCCHHHHHHHhcccHHHHHHHHhcc------cccccccccCC
Confidence            9999999999999999999999988      99999999999999999999988999999998      688887 8999


Q ss_pred             CHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccc
Q 037085          164 TALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVS  205 (248)
Q Consensus       164 tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~  205 (248)
                      ||||+|+..    ++..+++++++.|++......++.+ |+.
T Consensus       214 TpLHwa~~~----gN~~~v~Ll~~g~~~~d~~~~~g~t-p~~  250 (600)
T KOG0509|consen  214 TPLHWAVVG----GNLTAVKLLLEGGADLDKTNTNGKT-PFD  250 (600)
T ss_pred             chHHHHHhc----CCcceEehhhhcCCcccccccCCCC-HHH
Confidence            999999988    7788888777888887777666444 443


No 8  
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.97  E-value=9.1e-30  Score=219.12  Aligned_cols=182  Identities=16%  Similarity=0.169  Sum_probs=129.9

Q ss_pred             hhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhC----------------
Q 037085           10 SIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSIC----------------   73 (248)
Q Consensus        10 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~----------------   73 (248)
                      +..+..+.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+||..|+.++++.|++.+                
T Consensus        31 ~~~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadv-n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~  109 (477)
T PHA02878         31 TSASLIPFIPLHQAVEARNLDVVKSLLTRGHNV-NQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAF  109 (477)
T ss_pred             CcccccCcchHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHH
Confidence            334456778888888888888888888888777 677788888888888776655544444321                


Q ss_pred             -----------------------------------------------chhhhhhccC-CCcHHHHHHHcCChHHHHHHHH
Q 037085           74 -----------------------------------------------PESLEKLTSN-GETALHLAVKKSRSDAFQALVD  105 (248)
Q Consensus        74 -----------------------------------------------~~~~~~~~~~-g~t~lh~a~~~~~~~~~~~Ll~  105 (248)
                                                                     +.+++..+.. |.||||+|+..|+.+++++|++
T Consensus       110 ~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~  189 (477)
T PHA02878        110 NNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLS  189 (477)
T ss_pred             HcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHH
Confidence                                                           1123344555 7888888888888888888888


Q ss_pred             HHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHH
Q 037085          106 EAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWII  185 (248)
Q Consensus       106 ~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L  185 (248)
                      +|++      ++..|..|.||||+|+..++.+++++|++.|+      +++.+|..|+||||+|+...   +..+++++|
T Consensus       190 ~gad------~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga------~in~~d~~g~TpLh~A~~~~---~~~~iv~~L  254 (477)
T PHA02878        190 YGAN------VNIPDKTNNSPLHHAVKHYNKPIVHILLENGA------STDARDKCGNTPLHISVGYC---KDYDILKLL  254 (477)
T ss_pred             CCCC------CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCC------CCCCCCCCCCCHHHHHHHhc---CCHHHHHHH
Confidence            8777      77778888888888888888888888888876      67778888888888877531   356777888


Q ss_pred             HHhhhhcCCCCCCCCCcccccc
Q 037085          186 QRAVAQQSPQLPDAGSANVSWN  207 (248)
Q Consensus       186 ~~~g~~~~~~~~~~~~~~~~~~  207 (248)
                      +++|++++.+....+.+|++.+
T Consensus       255 l~~gadvn~~~~~~g~TpLh~A  276 (477)
T PHA02878        255 LEHGVDVNAKSYILGLTALHSS  276 (477)
T ss_pred             HHcCCCCCccCCCCCCCHHHHH
Confidence            8888777766554444465544


No 9  
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.96  E-value=1.9e-29  Score=217.62  Aligned_cols=180  Identities=19%  Similarity=0.157  Sum_probs=155.2

Q ss_pred             hhhccCCCCHHHHHH--hCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhC--CHHHHHHHHHhCchhhhhhccCCC
Q 037085           10 SIKNQRGETTMHLLS--TDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEG--DSDVIRALVSICPESLEKLTSNGE   85 (248)
Q Consensus        10 ~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g--~~~~~~~Ll~~~~~~~~~~~~~g~   85 (248)
                      +..+..|.||||+|+  ..|+.+++++|++.++++ +..+..|.||||+|+..|  +.+++++|++.+ .+++.++..|.
T Consensus       100 ~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g-~din~~d~~g~  177 (480)
T PHA03100        100 NAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANV-NIKNSDGENLLHLYLESNKIDLKILKLLIDKG-VDINAKNRYGY  177 (480)
T ss_pred             CCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCChHHHHHHHHHCC-CCcccccCCCC
Confidence            677888999999999  889999999999998887 778888999999999998  899999999885 45777888899


Q ss_pred             cHHHHHHHcCChHHHHHHHHHHhccccccccccccCCC------CcHhHHHHhCCc--HHHHHHHHhhcccccccccccc
Q 037085           86 TALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEG------NTVLHLATLNKL--KQIVELLIRENSNRRIMIRINT  157 (248)
Q Consensus        86 t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g------~t~Lh~A~~~~~--~~~v~~Ll~~g~~~~~~~~~~~  157 (248)
                      ||||+|+..|+.+++++|+++|++      ++..+..|      .||||+|+..++  .+++++|+++|+      +++.
T Consensus       178 tpL~~A~~~~~~~iv~~Ll~~ga~------~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~------din~  245 (480)
T PHA03100        178 TPLHIAVEKGNIDVIKFLLDNGAD------INAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGV------PINI  245 (480)
T ss_pred             CHHHHHHHhCCHHHHHHHHHcCCC------ccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCC------CCCC
Confidence            999999999999999999998887      67777777      888999999888  899999999887      8899


Q ss_pred             cCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085          158 VNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ  208 (248)
Q Consensus       158 ~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~  208 (248)
                      +|..|.||||+|+..    ++.+++++|+++|++++.....+.+ |++.+.
T Consensus       246 ~d~~g~TpL~~A~~~----~~~~iv~~Ll~~gad~n~~d~~g~t-pl~~A~  291 (480)
T PHA03100        246 KDVYGFTPLHYAVYN----NNPEFVKYLLDLGANPNLVNKYGDT-PLHIAI  291 (480)
T ss_pred             CCCCCCCHHHHHHHc----CCHHHHHHHHHcCCCCCccCCCCCc-HHHHHH
Confidence            999999999999987    6789999999999998887766655 666443


No 10 
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.96  E-value=3.1e-29  Score=212.36  Aligned_cols=170  Identities=21%  Similarity=0.201  Sum_probs=155.6

Q ss_pred             HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHH
Q 037085            9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETAL   88 (248)
Q Consensus         9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l   88 (248)
                      .+..+.++.||||.|+..|+.++++.|++.+.......+..|.||||+|+..|+.+++++|++.+ .+++..+..|.|||
T Consensus        61 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~g-ad~~~~~~~g~tpL  139 (413)
T PHA02875         61 PDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARG-ADPDIPNTDKFSPL  139 (413)
T ss_pred             ccccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCC-CCCCCCCCCCCCHH
Confidence            44556789999999999999999999999998876667788999999999999999999999985 55788899999999


Q ss_pred             HHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCC-CCHHH
Q 037085           89 HLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQG-QTALQ  167 (248)
Q Consensus        89 h~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g-~tpl~  167 (248)
                      |+|+..|+.+++++|+++|++      ++.+|..|.||||+|+..|+.+++++|+++|+      +++..+..| .||++
T Consensus       140 h~A~~~~~~~~v~~Ll~~g~~------~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga------~~n~~~~~~~~t~l~  207 (413)
T PHA02875        140 HLAVMMGDIKGIELLIDHKAC------LDIEDCCGCTPLIIAMAKGDIAICKMLLDSGA------NIDYFGKNGCVAALC  207 (413)
T ss_pred             HHHHHcCCHHHHHHHHhcCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC------CCCcCCCCCCchHHH
Confidence            999999999999999999988      88899999999999999999999999999998      788888877 58899


Q ss_pred             HHHHcCCCchHHHHHHHHHHhhhhcCCC
Q 037085          168 LCNANSQDSVFKEIGWIIQRAVAQQSPQ  195 (248)
Q Consensus       168 ~a~~~~~~~~~~~i~~~L~~~g~~~~~~  195 (248)
                      +|+..    +..+++++|+++|++++..
T Consensus       208 ~A~~~----~~~~iv~~Ll~~gad~n~~  231 (413)
T PHA02875        208 YAIEN----NKIDIVRLFIKRGADCNIM  231 (413)
T ss_pred             HHHHc----CCHHHHHHHHHCCcCcchH
Confidence            99987    7889999999999998764


No 11 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.96  E-value=8.9e-29  Score=190.11  Aligned_cols=181  Identities=14%  Similarity=0.114  Sum_probs=152.9

Q ss_pred             hhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhC--CHHHHHHHHHhCchhhhhhc-cC
Q 037085            7 QLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEG--DSDVIRALVSICPESLEKLT-SN   83 (248)
Q Consensus         7 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g--~~~~~~~Ll~~~~~~~~~~~-~~   83 (248)
                      ++.......+.||||.|+..|+.++|+.|++..    +..+..|.||||+|+..+  +.+++++|++.+. +++.++ ..
T Consensus        12 ~~~~~~~~~~~~pL~~A~~~~~~~~vk~Li~~~----n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~ga-dvn~~~~~~   86 (209)
T PHA02859         12 DFTDYLFYRYCNPLFYYVEKDDIEGVKKWIKFV----NDCNDLYETPIFSCLEKDKVNVEILKFLIENGA-DVNFKTRDN   86 (209)
T ss_pred             hhHHHHhhccCcHHHHHHHhCcHHHHHHHHHhh----hccCccCCCHHHHHHHcCCCCHHHHHHHHHCCC-CCCccCCCC
Confidence            345556788999999999999999999999752    456889999999999854  8999999999854 577776 58


Q ss_pred             CCcHHHHHHHc---CChHHHHHHHHHHhccccccccccccCCCCcHhHHHHh--CCcHHHHHHHHhhccccccccccccc
Q 037085           84 GETALHLAVKK---SRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATL--NKLKQIVELLIRENSNRRIMIRINTV  158 (248)
Q Consensus        84 g~t~lh~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~--~~~~~~v~~Ll~~g~~~~~~~~~~~~  158 (248)
                      |.||||+|+..   ++.+++++|+++|++      ++.+|..|.||||+|+.  .++.+++++|++.|+      +++.+
T Consensus        87 g~TpLh~a~~~~~~~~~eiv~~Ll~~gad------in~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~ga------din~~  154 (209)
T PHA02859         87 NLSALHHYLSFNKNVEPEILKILIDSGSS------ITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGV------SFLNK  154 (209)
T ss_pred             CCCHHHHHHHhCccccHHHHHHHHHCCCC------CCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCC------Ccccc
Confidence            99999998764   479999999999998      89999999999999986  468999999999998      89999


Q ss_pred             CCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085          159 NKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ  208 (248)
Q Consensus       159 ~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~  208 (248)
                      |..|.||||.++..   .+..+++++|+++|++++.....+.+ |++++.
T Consensus       155 d~~g~t~Lh~~a~~---~~~~~iv~~Ll~~Gadi~~~d~~g~t-pl~la~  200 (209)
T PHA02859        155 DFDNNNILYSYILF---HSDKKIFDFLTSLGIDINETNKSGYN-CYDLIK  200 (209)
T ss_pred             cCCCCcHHHHHHHh---cCCHHHHHHHHHcCCCCCCCCCCCCC-HHHHHh
Confidence            99999999975432   15789999999999999887765444 776554


No 12 
>PHA02946 ankyin-like protein; Provisional
Probab=99.96  E-value=3e-29  Score=212.84  Aligned_cols=184  Identities=14%  Similarity=0.131  Sum_probs=155.1

Q ss_pred             hhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhC--CHHHHHHHHHhCchhhhhhccCC
Q 037085            7 QLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEG--DSDVIRALVSICPESLEKLTSNG   84 (248)
Q Consensus         7 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g--~~~~~~~Ll~~~~~~~~~~~~~g   84 (248)
                      ..++.+|.+|.||||+|+..|+.+++++|+++|+++ +.+|..|.||||+|+..+  ..+++++|++.+.+.....|..|
T Consensus        63 advn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdi-n~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g  141 (446)
T PHA02946         63 YSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADP-NACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEG  141 (446)
T ss_pred             CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCC
Confidence            345778999999999999999999999999999998 789999999999998866  48999999998655333568899


Q ss_pred             CcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCC--cHHHHHHHHhhcccccccccccccCCCC
Q 037085           85 ETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNK--LKQIVELLIRENSNRRIMIRINTVNKQG  162 (248)
Q Consensus        85 ~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~--~~~~v~~Ll~~g~~~~~~~~~~~~~~~g  162 (248)
                      .|||| |+..++.+++++|++.|++      ++.+|..|+||||+|+..+  +.+++++|+++|+      +++.+|..|
T Consensus       142 ~tpL~-aa~~~~~~vv~~Ll~~gad------~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Ga------din~~d~~G  208 (446)
T PHA02946        142 CGPLL-ACTDPSERVFKKIMSIGFE------ARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGI------SPSKPDHDG  208 (446)
T ss_pred             CcHHH-HHHCCChHHHHHHHhcccc------ccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCC------CCcccCCCC
Confidence            99997 5667899999999999988      8889999999999988755  4689999999998      889999999


Q ss_pred             CCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085          163 QTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ  208 (248)
Q Consensus       163 ~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~  208 (248)
                      +||||+|+..+.  ...+++++|+. |++++.+...+.+ |++.+.
T Consensus       209 ~TpLH~Aa~~~~--~~~~iv~lLl~-gadin~~d~~G~T-pLh~A~  250 (446)
T PHA02946        209 NTPLHIVCSKTV--KNVDIINLLLP-STDVNKQNKFGDS-PLTLLI  250 (446)
T ss_pred             CCHHHHHHHcCC--CcHHHHHHHHc-CCCCCCCCCCCCC-HHHHHH
Confidence            999999987621  35788888885 8888887766655 776544


No 13 
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.96  E-value=4.5e-29  Score=214.85  Aligned_cols=157  Identities=20%  Similarity=0.163  Sum_probs=134.4

Q ss_pred             HHHHHHhcCcchhhhhcCC-CCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhc
Q 037085           31 MVRIFGENNRELCLEVDNS-LMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKS  109 (248)
Q Consensus        31 ~v~~Ll~~~~~~~~~~~~~-g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~  109 (248)
                      ++++|++.|+++ +..+.. |.||||+|+..|+.+++++|++.+ .+++..|..|.||||+|+..++.+++++|++.|++
T Consensus       149 iv~~Ll~~gadi-n~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~g-ad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~  226 (477)
T PHA02878        149 ITKLLLSYGADI-NMKDRHKGNTALHYATENKDQRLTELLLSYG-ANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGAS  226 (477)
T ss_pred             HHHHHHHcCCCC-CccCCCCCCCHHHHHHhCCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence            334444444444 445666 999999999999999999999985 45888999999999999999999999999999988


Q ss_pred             cccccccccccCCCCcHhHHHHhC-CcHHHHHHHHhhcccccccccccccCC-CCCCHHHHHHHcCCCchHHHHHHHHHH
Q 037085          110 HRKEHLFTWKDKEGNTVLHLATLN-KLKQIVELLIRENSNRRIMIRINTVNK-QGQTALQLCNANSQDSVFKEIGWIIQR  187 (248)
Q Consensus       110 ~~~~~~~~~~~~~g~t~Lh~A~~~-~~~~~v~~Ll~~g~~~~~~~~~~~~~~-~g~tpl~~a~~~~~~~~~~~i~~~L~~  187 (248)
                            ++.+|..|.||||+|+.. ++.+++++|+++|+      +++.++. .|.||||+|.      ...+++++|++
T Consensus       227 ------in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~ga------dvn~~~~~~g~TpLh~A~------~~~~~v~~Ll~  288 (477)
T PHA02878        227 ------TDARDKCGNTPLHISVGYCKDYDILKLLLEHGV------DVNAKSYILGLTALHSSI------KSERKLKLLLE  288 (477)
T ss_pred             ------CCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCC------CCCccCCCCCCCHHHHHc------cCHHHHHHHHH
Confidence                  889999999999999975 68999999999998      8888886 7999999994      35789999999


Q ss_pred             hhhhcCCCCCCCCCccccccc
Q 037085          188 AVAQQSPQLPDAGSANVSWNQ  208 (248)
Q Consensus       188 ~g~~~~~~~~~~~~~~~~~~~  208 (248)
                      +|++++....++.+ |++.+.
T Consensus       289 ~gadin~~d~~g~T-pL~~A~  308 (477)
T PHA02878        289 YGADINSLNSYKLT-PLSSAV  308 (477)
T ss_pred             CCCCCCCcCCCCCC-HHHHHH
Confidence            99999988877665 777654


No 14 
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.96  E-value=9.5e-29  Score=210.49  Aligned_cols=180  Identities=24%  Similarity=0.237  Sum_probs=157.3

Q ss_pred             HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHH
Q 037085            9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETAL   88 (248)
Q Consensus         9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l   88 (248)
                      ++..+..|.||||+|+..|+.+++++|++.++++ +.+|..|.||||+|+..|+.+++++|++.+ ..++..+..|.|||
T Consensus       117 ~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~-n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g-~~~n~~~~~g~tpL  194 (434)
T PHA02874        117 VNIKDAELKTFLHYAIKKGDLESIKMLFEYGADV-NIEDDNGCYPIHIAIKHNFFDIIKLLLEKG-AYANVKDNNGESPL  194 (434)
T ss_pred             CCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHCCcHHHHHHHHHCC-CCCCCCCCCCCCHH
Confidence            4567889999999999999999999999999998 788999999999999999999999999985 45778899999999


Q ss_pred             HHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHH
Q 037085           89 HLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQL  168 (248)
Q Consensus        89 h~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~  168 (248)
                      |+|+..|+.+++++|++.|++      ++.++..|.||||+|+..+. +.+++|+ .|+      +++.+|..|+||||+
T Consensus       195 ~~A~~~g~~~iv~~Ll~~g~~------i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~------~in~~d~~G~TpLh~  260 (434)
T PHA02874        195 HNAAEYGDYACIKLLIDHGNH------IMNKCKNGFTPLHNAIIHNR-SAIELLI-NNA------SINDQDIDGSTPLHH  260 (434)
T ss_pred             HHHHHcCCHHHHHHHHhCCCC------CcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCC------CCCCcCCCCCCHHHH
Confidence            999999999999999999988      78888999999999998765 5666666 455      788999999999999


Q ss_pred             HHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085          169 CNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ  208 (248)
Q Consensus       169 a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~  208 (248)
                      |+..+   ...+++++|+++|++++.....+.+ |++.+.
T Consensus       261 A~~~~---~~~~iv~~Ll~~gad~n~~d~~g~T-pL~~A~  296 (434)
T PHA02874        261 AINPP---CDIDIIDILLYHKADISIKDNKGEN-PIDTAF  296 (434)
T ss_pred             HHhcC---CcHHHHHHHHHCcCCCCCCCCCCCC-HHHHHH
Confidence            98752   3678999999999999888876665 766543


No 15 
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.96  E-value=1.7e-28  Score=211.73  Aligned_cols=170  Identities=26%  Similarity=0.302  Sum_probs=157.2

Q ss_pred             hhHhhhccCCCCHHHHHHhCC--CHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCC
Q 037085            7 QLASIKNQRGETTMHLLSTDG--DARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNG   84 (248)
Q Consensus         7 ~~~~~~~~~g~t~L~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g   84 (248)
                      ..++..+..|.||||+|+..|  +.+++++|+++|+++ +.++..|.||||+|+..|+.+++++|++.+ .+++..+..|
T Consensus       132 ~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~di-n~~d~~g~tpL~~A~~~~~~~iv~~Ll~~g-a~~~~~~~~~  209 (480)
T PHA03100        132 ANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDI-NAKNRYGYTPLHIAVEKGNIDVIKFLLDNG-ADINAGDIET  209 (480)
T ss_pred             CCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCc-ccccCCCCCHHHHHHHhCCHHHHHHHHHcC-CCccCCCCCC
Confidence            345677889999999999999  999999999999998 778889999999999999999999999985 4577777788


Q ss_pred             ------CcHHHHHHHcCC--hHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhccccccccccc
Q 037085           85 ------ETALHLAVKKSR--SDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRIN  156 (248)
Q Consensus        85 ------~t~lh~a~~~~~--~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~  156 (248)
                            .||||+|+..++  .+++++|++.|++      ++.+|..|.||||+|+..++.+++++|++.|+      |++
T Consensus       210 ~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~d------in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga------d~n  277 (480)
T PHA03100        210 LLFTIFETPLHIAACYNEITLEVVNYLLSYGVP------INIKDVYGFTPLHYAVYNNNPEFVKYLLDLGA------NPN  277 (480)
T ss_pred             CcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCC
Confidence                  899999999999  9999999999988      88999999999999999999999999999998      899


Q ss_pred             ccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCC
Q 037085          157 TVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSP  194 (248)
Q Consensus       157 ~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~  194 (248)
                      .+|..|.||+++|+..    +..+++++|+++|++++.
T Consensus       278 ~~d~~g~tpl~~A~~~----~~~~iv~~Ll~~g~~i~~  311 (480)
T PHA03100        278 LVNKYGDTPLHIAILN----NNKEIFKLLLNNGPSIKT  311 (480)
T ss_pred             ccCCCCCcHHHHHHHh----CCHHHHHHHHhcCCCHHH
Confidence            9999999999999987    788999999999997654


No 16 
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.96  E-value=2.9e-28  Score=214.11  Aligned_cols=182  Identities=16%  Similarity=0.223  Sum_probs=155.0

Q ss_pred             Hhhh-ccCCCCHHHHHHh--CCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCC--HHHHHHHHHhCchhhhhhccC
Q 037085            9 ASIK-NQRGETTMHLLST--DGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGD--SDVIRALVSICPESLEKLTSN   83 (248)
Q Consensus         9 ~~~~-~~~g~t~L~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~--~~~~~~Ll~~~~~~~~~~~~~   83 (248)
                      ++.. |..|.||||.|+.  +++.+++++|+++|+++ +.+|..|.||||+|+..|+  .+++++|++.+ .+++.++..
T Consensus       169 IN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADV-N~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~G-ADVN~kD~~  246 (764)
T PHA02716        169 LNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNV-NLQNNHLITPLHTYLITGNVCASVIKKIIELG-GDMDMKCVN  246 (764)
T ss_pred             cccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcC-CCCCCCCCC
Confidence            4555 8889999999875  46789999999999998 7899999999999999995  59999999985 568999999


Q ss_pred             CCcHHHHHH-------------------------------------HcCChHHHHHHHHHHhccccccccccccCCCCcH
Q 037085           84 GETALHLAV-------------------------------------KKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTV  126 (248)
Q Consensus        84 g~t~lh~a~-------------------------------------~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~  126 (248)
                      |.||||+|+                                     ..|+.+++++|++.|++      ++.+|..|+||
T Consensus       247 G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAd------IN~kD~~G~TP  320 (764)
T PHA02716        247 GMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVK------LHYKDSAGRTC  320 (764)
T ss_pred             CCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCc------eeccCCCCCCH
Confidence            999999753                                     34677888888888887      88999999999


Q ss_pred             hHHHHh--CCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcC----------CCchHHHHHHHHHHhhhhcCC
Q 037085          127 LHLATL--NKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANS----------QDSVFKEIGWIIQRAVAQQSP  194 (248)
Q Consensus       127 Lh~A~~--~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~----------~~~~~~~i~~~L~~~g~~~~~  194 (248)
                      ||+|+.  .++.+++++|+++|+      +++.+|..|+||||+|+...          ...++.+++++|+++|++++.
T Consensus       321 LH~Aaa~~~~~~eIVklLLe~GA------DIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~  394 (764)
T PHA02716        321 LHQYILRHNISTDIIKLLHEYGN------DLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITA  394 (764)
T ss_pred             HHHHHHHhCCCchHHHHHHHcCC------CCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCC
Confidence            999875  457899999999998      89999999999999986521          113578999999999999998


Q ss_pred             CCCCCCCcccc
Q 037085          195 QLPDAGSANVS  205 (248)
Q Consensus       195 ~~~~~~~~~~~  205 (248)
                      ....+.+ |++
T Consensus       395 kn~~G~T-PLh  404 (764)
T PHA02716        395 VNCLGYT-PLT  404 (764)
T ss_pred             cCCCCCC-hHH
Confidence            8866655 775


No 17 
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.96  E-value=1.1e-28  Score=205.84  Aligned_cols=174  Identities=22%  Similarity=0.258  Sum_probs=159.7

Q ss_pred             CCHHHHHHhCCCHHHHHHHHhc-CcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhc-cCCCcHHHHHHHc
Q 037085           17 ETTMHLLSTDGDARMVRIFGEN-NRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLT-SNGETALHLAVKK   94 (248)
Q Consensus        17 ~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~-~~g~t~lh~a~~~   94 (248)
                      ...++.|+++|.++.++.+++. +.++ +..|.+|.|+||+|+.+++.+++++|+++++ ++|..+ .-+.||||+|+++
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g~~v-~~~D~~g~tlLHWAAiNNrl~v~r~li~~ga-dvn~~gG~l~stPLHWAar~  122 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEGESV-NNPDREGVTLLHWAAINNRLDVARYLISHGA-DVNAIGGVLGSTPLHWAARN  122 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcCcCC-CCCCcCCccceeHHHHcCcHHHHHHHHHcCC-CccccCCCCCCCcchHHHHc
Confidence            4577899999999999999999 6666 7889999999999999999999999999955 477766 6688999999999


Q ss_pred             CChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCC
Q 037085           95 SRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQ  174 (248)
Q Consensus        95 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~  174 (248)
                      |+..++.+|+++|++      ++.+|.+|.||||+|+..++..+|-+|+..++      |++.+|.+|+|||++|+..  
T Consensus       123 G~~~vv~lLlqhGAd------pt~~D~~G~~~lHla~~~~~~~~vayll~~~~------d~d~~D~~grTpLmwAayk--  188 (600)
T KOG0509|consen  123 GHISVVDLLLQHGAD------PTLKDKQGLTPLHLAAQFGHTALVAYLLSKGA------DIDLRDNNGRTPLMWAAYK--  188 (600)
T ss_pred             CcHHHHHHHHHcCCC------CceecCCCCcHHHHHHHhCchHHHHHHHHhcc------cCCCcCCCCCCHHHHHHHh--
Confidence            999999999999999      89999999999999999999999999999997      8999999999999999987  


Q ss_pred             CchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085          175 DSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ  208 (248)
Q Consensus       175 ~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~  208 (248)
                        ++...++.|++.|+.+...+...+.+|++|+.
T Consensus       189 --g~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~  220 (600)
T KOG0509|consen  189 --GFALFVRRLLKFGASLLLTDDNHGNTPLHWAV  220 (600)
T ss_pred             --cccHHHHHHHHhcccccccccccCCchHHHHH
Confidence              55555999999999999999888888999876


No 18 
>PHA02798 ankyrin-like protein; Provisional
Probab=99.96  E-value=4.8e-28  Score=208.94  Aligned_cols=190  Identities=14%  Similarity=0.099  Sum_probs=162.7

Q ss_pred             chhHhhhccCCCCHHHHHHhC-----CCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhC---CHHHHHHHHHhCchhh
Q 037085            6 PQLASIKNQRGETTMHLLSTD-----GDARMVRIFGENNRELCLEVDNSLMIPLHRAALEG---DSDVIRALVSICPESL   77 (248)
Q Consensus         6 ~~~~~~~~~~g~t~L~~A~~~-----g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g---~~~~~~~Ll~~~~~~~   77 (248)
                      +..++..+..|.||||.|+.+     +..+++++|++.|+++ +.+|..|.||||+|+..+   +.+++++|++.+ .++
T Consensus        61 Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~Gadi-N~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~G-adv  138 (489)
T PHA02798         61 GANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADI-NKKNSDGETPLYCLLSNGYINNLEILLFMIENG-ADT  138 (489)
T ss_pred             CCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCC-CCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcC-CCc
Confidence            334667889999999999864     6789999999999998 889999999999999876   789999999985 558


Q ss_pred             hhhccCCCcHHHHHHHcCC---hHHHHHHHHHHhcccccccccccc-CCCCcHhHHHHhC----CcHHHHHHHHhhcccc
Q 037085           78 EKLTSNGETALHLAVKKSR---SDAFQALVDEAKSHRKEHLFTWKD-KEGNTVLHLATLN----KLKQIVELLIRENSNR  149 (248)
Q Consensus        78 ~~~~~~g~t~lh~a~~~~~---~~~~~~Ll~~~~~~~~~~~~~~~~-~~g~t~Lh~A~~~----~~~~~v~~Ll~~g~~~  149 (248)
                      +.+|..|.||||+|+..++   .+++++|+++|++      ++..+ ..|.||||.++..    ++.+++++|+++|++.
T Consensus       139 n~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gad------in~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i  212 (489)
T PHA02798        139 TLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVD------INTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFII  212 (489)
T ss_pred             cccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCC------cccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCc
Confidence            8999999999999999988   9999999999988      77664 5789999998764    4789999999998743


Q ss_pred             cc---------------------------------cccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCC
Q 037085          150 RI---------------------------------MIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQL  196 (248)
Q Consensus       150 ~~---------------------------------~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~  196 (248)
                      ..                                 ++|+|.+|..|+||||+|+..    ++.+++++|++.|++++...
T Consensus       213 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~----~~~~~v~~LL~~GAdin~~d  288 (489)
T PHA02798        213 NKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSH----NNRKIFEYLLQLGGDINIIT  288 (489)
T ss_pred             ccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHc----CcHHHHHHHHHcCCcccccC
Confidence            21                                 246788999999999999987    68899999999999999888


Q ss_pred             CCCCCccccccc
Q 037085          197 PDAGSANVSWNQ  208 (248)
Q Consensus       197 ~~~~~~~~~~~~  208 (248)
                      ..+.+ |++++.
T Consensus       289 ~~G~T-pL~~A~  299 (489)
T PHA02798        289 ELGNT-CLFTAF  299 (489)
T ss_pred             CCCCc-HHHHHH
Confidence            77665 777554


No 19 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.95  E-value=2.4e-27  Score=196.05  Aligned_cols=171  Identities=12%  Similarity=0.093  Sum_probs=150.7

Q ss_pred             hhccCCCCHHHHHHh--CCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhh-----ccC
Q 037085           11 IKNQRGETTMHLLST--DGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKL-----TSN   83 (248)
Q Consensus        11 ~~~~~g~t~L~~A~~--~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~-----~~~   83 (248)
                      .++..++|+||+|+.  .|+.+++++|+++|+++ +.  .++.||||.|+..++.+++++|++++....+..     +..
T Consensus       111 ~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADI-n~--~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~  187 (437)
T PHA02795        111 KNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVI-YK--IECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKII  187 (437)
T ss_pred             hccccccHHHHHHHHhcCCCHHHHHHHHHCCCCC-CC--CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhh
Confidence            467789999999999  89999999999999998 43  355899999999999999999999975443332     234


Q ss_pred             CCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCC
Q 037085           84 GETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQ  163 (248)
Q Consensus        84 g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~  163 (248)
                      +.+++|.|+..++.+++++|+++|++      ++.+|..|.||||+|+..|+.+++++|+++|+      +++.+|..|.
T Consensus       188 ~~t~l~~a~~~~~~eIve~LIs~GAD------IN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GA------dIN~~d~~G~  255 (437)
T PHA02795        188 QYTRGFLVDEPTVLEIYKLCIPYIED------INQLDAGGRTLLYRAIYAGYIDLVSWLLENGA------NVNAVMSNGY  255 (437)
T ss_pred             ccchhHHHHhcCHHHHHHHHHhCcCC------cCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCC------CCCCcCCCCC
Confidence            78999999999999999999999998      99999999999999999999999999999998      8999999999


Q ss_pred             CHHHHHHHcCC----CchHHHHHHHHHHhhhhcCCCC
Q 037085          164 TALQLCNANSQ----DSVFKEIGWIIQRAVAQQSPQL  196 (248)
Q Consensus       164 tpl~~a~~~~~----~~~~~~i~~~L~~~g~~~~~~~  196 (248)
                      ||||+|+..+.    ...+.+++++|+++|+++....
T Consensus       256 TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~  292 (437)
T PHA02795        256 TCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIK  292 (437)
T ss_pred             CHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchh
Confidence            99999998853    2346899999999999877643


No 20 
>PHA02798 ankyrin-like protein; Provisional
Probab=99.95  E-value=1.8e-27  Score=205.42  Aligned_cols=177  Identities=20%  Similarity=0.165  Sum_probs=153.3

Q ss_pred             chhHhhhccCCCCHHHHHHhCC---CHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCC---HHHHHHHHHhCchhhhh
Q 037085            6 PQLASIKNQRGETTMHLLSTDG---DARMVRIFGENNRELCLEVDNSLMIPLHRAALEGD---SDVIRALVSICPESLEK   79 (248)
Q Consensus         6 ~~~~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~---~~~~~~Ll~~~~~~~~~   79 (248)
                      +..++.+|..|.||||+|+..+   +.+++++|+++|+++ +.+|..|.||||+|++.++   .+++++|++.+. +++.
T Consensus        99 GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~ga-din~  176 (489)
T PHA02798         99 GADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADT-TLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGV-DINT  176 (489)
T ss_pred             CCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCc-cccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCC-Cccc
Confidence            3446788999999999999875   789999999999998 8899999999999999988   999999999854 4555


Q ss_pred             h-ccCCCcHHHHHHHc----CChHHHHHHHHHHhcccc---------------------------------ccccccccC
Q 037085           80 L-TSNGETALHLAVKK----SRSDAFQALVDEAKSHRK---------------------------------EHLFTWKDK  121 (248)
Q Consensus        80 ~-~~~g~t~lh~a~~~----~~~~~~~~Ll~~~~~~~~---------------------------------~~~~~~~~~  121 (248)
                      . +..|.||||.++..    ++.+++++|+++|++...                                 ...++.+|.
T Consensus       177 ~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~  256 (489)
T PHA02798        177 HNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDE  256 (489)
T ss_pred             ccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCc
Confidence            5 46789999998764    478999999998865431                                 123567889


Q ss_pred             CCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCC
Q 037085          122 EGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSP  194 (248)
Q Consensus       122 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~  194 (248)
                      .|+||||+|+..++.+++++|++.|+      |++.+|..|+|||++|+..    +..++++.|++.+++++.
T Consensus       257 ~G~TPL~~A~~~~~~~~v~~LL~~GA------din~~d~~G~TpL~~A~~~----~~~~iv~~lL~~~~~~~~  319 (489)
T PHA02798        257 LGFNPLYYSVSHNNRKIFEYLLQLGG------DINIITELGNTCLFTAFEN----ESKFIFNSILNKKPNKNT  319 (489)
T ss_pred             CCccHHHHHHHcCcHHHHHHHHHcCC------cccccCCCCCcHHHHHHHc----CcHHHHHHHHccCCCHHH
Confidence            99999999999999999999999998      8999999999999999987    788999999999888753


No 21 
>PHA03095 ankyrin-like protein; Provisional
Probab=99.95  E-value=2.1e-27  Score=204.44  Aligned_cols=190  Identities=19%  Similarity=0.163  Sum_probs=140.5

Q ss_pred             chhHhhhccCCCCHHHHHHhCC-CHHHHHHHHhcCcchhhhhcCCCCcHHHHHH--HhCCHHHHHHHHHhCchhhhhhcc
Q 037085            6 PQLASIKNQRGETTMHLLSTDG-DARMVRIFGENNRELCLEVDNSLMIPLHRAA--LEGDSDVIRALVSICPESLEKLTS   82 (248)
Q Consensus         6 ~~~~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~--~~g~~~~~~~Ll~~~~~~~~~~~~   82 (248)
                      +..++.++..|.||||+|+..| ..+++++|++.|+++ +.++..|.||||+|+  ..++.+++++|++.+ .+++.+|.
T Consensus        73 Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~i-n~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~g-ad~~~~d~  150 (471)
T PHA03095         73 GADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADV-NAKDKVGRTPLHVYLSGFNINPKVIRLLLRKG-ADVNALDL  150 (471)
T ss_pred             CCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcC-CCCCccCC
Confidence            3446677778888888888888 588888888888887 778888888888888  456788888888874 44677777


Q ss_pred             CCCcHHHHHHHcC--ChHHHHHHHHHHhccc-----------------------------cccccccccCCCCcHhHHHH
Q 037085           83 NGETALHLAVKKS--RSDAFQALVDEAKSHR-----------------------------KEHLFTWKDKEGNTVLHLAT  131 (248)
Q Consensus        83 ~g~t~lh~a~~~~--~~~~~~~Ll~~~~~~~-----------------------------~~~~~~~~~~~g~t~Lh~A~  131 (248)
                      .|.||||+|+..+  +.+++++|+++|++..                             .+..++.+|..|+||||+|+
T Consensus       151 ~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa  230 (471)
T PHA03095        151 YGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMA  230 (471)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence            7888888777654  4566777777665521                             11114556666666666666


Q ss_pred             hCCcH--HHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085          132 LNKLK--QIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ  208 (248)
Q Consensus       132 ~~~~~--~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~  208 (248)
                      ..++.  .+++.|++.|+      +++.+|..|+||||+|+..    ++.+++++|+++|++++.....+.+ |++.+.
T Consensus       231 ~~~~~~~~~v~~ll~~g~------din~~d~~g~TpLh~A~~~----~~~~~v~~LL~~gad~n~~~~~g~t-pl~~A~  298 (471)
T PHA03095        231 TGSSCKRSLVLPLLIAGI------SINARNRYGQTPLHYAAVF----NNPRACRRLIALGADINAVSSDGNT-PLSLMV  298 (471)
T ss_pred             hcCCchHHHHHHHHHcCC------CCCCcCCCCCCHHHHHHHc----CCHHHHHHHHHcCCCCcccCCCCCC-HHHHHH
Confidence            66543  46666677765      7888999999999999877    6789999999999999888776665 666443


No 22 
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.95  E-value=1.5e-27  Score=209.66  Aligned_cols=174  Identities=21%  Similarity=0.176  Sum_probs=147.6

Q ss_pred             CchhHhhhccCCCCHHHHHHhCCC--HHHHHHHHhcCcchhhhhcCCCCcHHHHH-------------------------
Q 037085            5 WPQLASIKNQRGETTMHLLSTDGD--ARMVRIFGENNRELCLEVDNSLMIPLHRA-------------------------   57 (248)
Q Consensus         5 ~~~~~~~~~~~g~t~L~~A~~~g~--~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A-------------------------   57 (248)
                      ++..++.+|..|.||||+|+..|+  .+++++|++.|+++ +.++..|.||||+|                         
T Consensus       201 ~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADV-N~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~  279 (764)
T PHA02716        201 NGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDM-DMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVK  279 (764)
T ss_pred             cCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccc
Confidence            344567789999999999999995  58999999999998 88999999999975                         


Q ss_pred             ------------HHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHH--cCChHHHHHHHHHHhccccccccccccCCC
Q 037085           58 ------------ALEGDSDVIRALVSICPESLEKLTSNGETALHLAVK--KSRSDAFQALVDEAKSHRKEHLFTWKDKEG  123 (248)
Q Consensus        58 ------------~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~--~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g  123 (248)
                                  +..|+.+++++|++.+ ..++.+|..|+||||+|+.  .++.+++++|+++|++      ++.+|..|
T Consensus       280 ~~~~~L~~~i~AA~~g~leiVklLLe~G-AdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GAD------IN~kD~~G  352 (764)
T PHA02716        280 NIPMILHSYITLARNIDISVVYSFLQPG-VKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGND------LNEPDNIG  352 (764)
T ss_pred             cchhhhHHHHHHHHcCCHHHHHHHHhCC-CceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCC------CccCCCCC
Confidence                        3457788999999885 4588899999999999764  4678999999999988      89999999


Q ss_pred             CcHhHHHHh--------------CCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhh
Q 037085          124 NTVLHLATL--------------NKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAV  189 (248)
Q Consensus       124 ~t~Lh~A~~--------------~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g  189 (248)
                      +||||+|+.              .++.+++++|+++|+      +++.+|..|.||||.++..+...+..+++++|++.|
T Consensus       353 ~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GA------DIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~  426 (764)
T PHA02716        353 NTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGA------DITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDK  426 (764)
T ss_pred             CCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCC------CCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCc
Confidence            999999875              368899999999998      899999999999995433323346789999999987


Q ss_pred             hhc
Q 037085          190 AQQ  192 (248)
Q Consensus       190 ~~~  192 (248)
                      +..
T Consensus       427 ~~~  429 (764)
T PHA02716        427 VLN  429 (764)
T ss_pred             chh
Confidence            643


No 23 
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.95  E-value=2.4e-27  Score=204.78  Aligned_cols=170  Identities=16%  Similarity=0.150  Sum_probs=99.4

Q ss_pred             HhhhccCCCCHHHHHHhC---CCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHh--CCHHHHHHHHHhCchhhhh-hcc
Q 037085            9 ASIKNQRGETTMHLLSTD---GDARMVRIFGENNRELCLEVDNSLMIPLHRAALE--GDSDVIRALVSICPESLEK-LTS   82 (248)
Q Consensus         9 ~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~--g~~~~~~~Ll~~~~~~~~~-~~~   82 (248)
                      ++.+|..|.||||.|+..   ++.+++++|+++|+++.+.+|..|.||||+|+..  ++.+++++|++.+.+ ++. .+.
T Consensus       101 in~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gad-i~~~~~~  179 (494)
T PHA02989        101 INLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVN-LFEKTSL  179 (494)
T ss_pred             CCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCC-ccccccc
Confidence            455566666666665543   4566666666666665445566666666666543  456666666666433 333 455


Q ss_pred             CCCcHHHHHHHcC----ChHHHHHHHHHHhccccc--------------------------------cccccccCCCCcH
Q 037085           83 NGETALHLAVKKS----RSDAFQALVDEAKSHRKE--------------------------------HLFTWKDKEGNTV  126 (248)
Q Consensus        83 ~g~t~lh~a~~~~----~~~~~~~Ll~~~~~~~~~--------------------------------~~~~~~~~~g~t~  126 (248)
                      .|.||||+|+..+    +.+++++|+++|++....                                ..++.+|..|+||
T Consensus       180 ~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~Tp  259 (494)
T PHA02989        180 YGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNP  259 (494)
T ss_pred             cCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCH
Confidence            6666666665543    566666666666553211                                1134455556666


Q ss_pred             hHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhh
Q 037085          127 LHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAV  189 (248)
Q Consensus       127 Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g  189 (248)
                      ||+|+..++.+++++|+++|+      |++.+|..|.||||+|+..    ++.++++.|++.+
T Consensus       260 L~~Aa~~~~~~~v~~LL~~Ga------din~~d~~G~TpL~~A~~~----~~~~iv~~LL~~~  312 (494)
T PHA02989        260 LLISAKVDNYEAFNYLLKLGD------DIYNVSKDGDTVLTYAIKH----GNIDMLNRILQLK  312 (494)
T ss_pred             HHHHHHhcCHHHHHHHHHcCC------CccccCCCCCCHHHHHHHc----CCHHHHHHHHhcC
Confidence            666666666666666666665      5566666666666666555    4555666665543


No 24 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.95  E-value=5.4e-27  Score=180.24  Aligned_cols=150  Identities=20%  Similarity=0.260  Sum_probs=133.1

Q ss_pred             HhhhccCCCCHHHHHHhCC--CHHHHHHHHhcCcchhhhhc-CCCCcHHHHHHHh---CCHHHHHHHHHhCchhhhhhcc
Q 037085            9 ASIKNQRGETTMHLLSTDG--DARMVRIFGENNRELCLEVD-NSLMIPLHRAALE---GDSDVIRALVSICPESLEKLTS   82 (248)
Q Consensus         9 ~~~~~~~g~t~L~~A~~~g--~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~---g~~~~~~~Ll~~~~~~~~~~~~   82 (248)
                      .+..|..|.||||+|+..+  +.+++++|++.++++ +.++ ..|.||||+|+..   ++.+++++|++. +.+++.+|.
T Consensus        44 ~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadv-n~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~-gadin~~d~  121 (209)
T PHA02859         44 VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADV-NFKTRDNNLSALHHYLSFNKNVEPEILKILIDS-GSSITEEDE  121 (209)
T ss_pred             hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCC-CccCCCCCCCHHHHHHHhCccccHHHHHHHHHC-CCCCCCcCC
Confidence            5667899999999999854  899999999999999 5665 5899999998753   579999999998 556899999


Q ss_pred             CCCcHHHHHHH--cCChHHHHHHHHHHhccccccccccccCCCCcHhHH-HHhCCcHHHHHHHHhhcccccccccccccC
Q 037085           83 NGETALHLAVK--KSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHL-ATLNKLKQIVELLIRENSNRRIMIRINTVN  159 (248)
Q Consensus        83 ~g~t~lh~a~~--~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~-A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~  159 (248)
                      .|.||||+|+.  .++.+++++|+++|++      ++.+|..|.||||. |+..++.+++++|+++|+      +++.+|
T Consensus       122 ~G~TpLh~a~~~~~~~~~iv~~Li~~gad------in~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Ga------di~~~d  189 (209)
T PHA02859        122 DGKNLLHMYMCNFNVRINVIKLLIDSGVS------FLNKDFDNNNILYSYILFHSDKKIFDFLTSLGI------DINETN  189 (209)
T ss_pred             CCCCHHHHHHHhccCCHHHHHHHHHcCCC------cccccCCCCcHHHHHHHhcCCHHHHHHHHHcCC------CCCCCC
Confidence            99999999876  4689999999999988      88999999999996 566789999999999998      899999


Q ss_pred             CCCCCHHHHHHHc
Q 037085          160 KQGQTALQLCNAN  172 (248)
Q Consensus       160 ~~g~tpl~~a~~~  172 (248)
                      ..|+||+++|..+
T Consensus       190 ~~g~tpl~la~~~  202 (209)
T PHA02859        190 KSGYNCYDLIKFR  202 (209)
T ss_pred             CCCCCHHHHHhhh
Confidence            9999999999765


No 25 
>PHA03095 ankyrin-like protein; Provisional
Probab=99.95  E-value=3.3e-27  Score=203.30  Aligned_cols=183  Identities=17%  Similarity=0.177  Sum_probs=146.2

Q ss_pred             chhHhhhccCCCCHHHHHHhCC---CHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhC-CHHHHHHHHHhCchhhhhhc
Q 037085            6 PQLASIKNQRGETTMHLLSTDG---DARMVRIFGENNRELCLEVDNSLMIPLHRAALEG-DSDVIRALVSICPESLEKLT   81 (248)
Q Consensus         6 ~~~~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g-~~~~~~~Ll~~~~~~~~~~~   81 (248)
                      +..++..+..|.||||+|+..+   +.+++++|++.|+++ +.++..|.||||+|+..| +.+++++|++.+ .+++.++
T Consensus        37 ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadi-n~~~~~g~TpLh~A~~~~~~~~iv~lLl~~g-a~in~~~  114 (471)
T PHA03095         37 GADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADV-NAPERCGFTPLHLYLYNATTLDVIKLLIKAG-ADVNAKD  114 (471)
T ss_pred             CCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCcHHHHHHHHHcC-CCCCCCC
Confidence            3446678899999999999998   999999999999998 788999999999999999 599999999984 5588999


Q ss_pred             cCCCcHHHHHH--HcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCC--cHHHHHHHHhhcccccccccccc
Q 037085           82 SNGETALHLAV--KKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNK--LKQIVELLIRENSNRRIMIRINT  157 (248)
Q Consensus        82 ~~g~t~lh~a~--~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~--~~~~v~~Ll~~g~~~~~~~~~~~  157 (248)
                      ..|.||||+|+  ..++.+++++|+++|++      ++.+|..|.||||+|+..+  +.+++++|++.|+      +++.
T Consensus       115 ~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad------~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~------~~~~  182 (471)
T PHA03095        115 KVGRTPLHVYLSGFNINPKVIRLLLRKGAD------VNALDLYGMTPLAVLLKSRNANVELLRLLIDAGA------DVYA  182 (471)
T ss_pred             CCCCCHHHHHhhCCcCCHHHHHHHHHcCCC------CCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCC------CCcc
Confidence            99999999999  45678999999999988      7888889999999888765  5788888888887      5555


Q ss_pred             cCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccc
Q 037085          158 VNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVS  205 (248)
Q Consensus       158 ~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~  205 (248)
                      .+..|.||||+++...  ....++++.|+++|++++.+...+.+ |++
T Consensus       183 ~d~~g~t~Lh~~~~~~--~~~~~i~~~Ll~~g~~~~~~d~~g~t-pLh  227 (471)
T PHA03095        183 VDDRFRSLLHHHLQSF--KPRARIVRELIRAGCDPAATDMLGNT-PLH  227 (471)
T ss_pred             cCCCCCCHHHHHHHHC--CCcHHHHHHHHHcCCCCcccCCCCCC-HHH
Confidence            5666777777666542  23455666666666665555444433 444


No 26 
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.95  E-value=5.5e-27  Score=209.92  Aligned_cols=186  Identities=17%  Similarity=0.146  Sum_probs=133.4

Q ss_pred             CchhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCch---------
Q 037085            5 WPQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPE---------   75 (248)
Q Consensus         5 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~---------   75 (248)
                      ++..++.+|..|.||||+|+..|+.++|++|+++|+++ +..+..|.||||+|+..|+.++++.|++.+..         
T Consensus       167 ~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~-n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~  245 (682)
T PHA02876        167 GGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADV-NIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLL  245 (682)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCc-CccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHH
Confidence            34446678899999999999999999999999999987 67778888888888888888887777654321         


Q ss_pred             -------------------hhhhhccCCCcHHHHHHHcCCh-HHHHHHHHHHhccccccccccccCCCCcHhHHHHhCC-
Q 037085           76 -------------------SLEKLTSNGETALHLAVKKSRS-DAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNK-  134 (248)
Q Consensus        76 -------------------~~~~~~~~g~t~lh~a~~~~~~-~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~-  134 (248)
                                         .++..+..|.||||+|+..++. +++++|++.|++      ++.+|..|.||||+|+..| 
T Consensus       246 ~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gad------in~~d~~g~TpLh~Aa~~g~  319 (682)
T PHA02876        246 KAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGAD------VNAKNIKGETPLYLMAKNGY  319 (682)
T ss_pred             HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCC------CCCcCCCCCCHHHHHHHhCC
Confidence                               2344566788888888887775 577788877776      6777777778888777777 


Q ss_pred             cHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccccc
Q 037085          135 LKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWN  207 (248)
Q Consensus       135 ~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~  207 (248)
                      ..+++++|+..|+      +++..|..|.||||+|+..+   ...+++++|++.|++++.+...+.+ |++.+
T Consensus       320 ~~~~v~~Ll~~ga------din~~d~~g~TpLh~A~~~~---~~~~iv~lLl~~gadin~~d~~G~T-pLh~A  382 (682)
T PHA02876        320 DTENIRTLIMLGA------DVNAADRLYITPLHQASTLD---RNKDIVITLLELGANVNARDYCDKT-PIHYA  382 (682)
T ss_pred             CHHHHHHHHHcCC------CCCCcccCCCcHHHHHHHhC---CcHHHHHHHHHcCCCCccCCCCCCC-HHHHH
Confidence            4677777777776      56666666666666665432   3445666666666666655544433 55433


No 27 
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.95  E-value=4.3e-27  Score=200.65  Aligned_cols=178  Identities=24%  Similarity=0.329  Sum_probs=155.3

Q ss_pred             hhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcch--------------hhhhcCCCCcHHHHHHHhCCHHHHHHHHHh
Q 037085            7 QLASIKNQRGETTMHLLSTDGDARMVRIFGENNREL--------------CLEVDNSLMIPLHRAALEGDSDVIRALVSI   72 (248)
Q Consensus         7 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~--------------~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~   72 (248)
                      .-++.-|+.|.||||.|+..|+.++++.+|+.+...              .+..|.+|.||||+||+.|+.+.++.|+..
T Consensus       216 ~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~  295 (929)
T KOG0510|consen  216 THINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGF  295 (929)
T ss_pred             cccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHc
Confidence            345677899999999999999999999999987643              244588999999999999999999999998


Q ss_pred             CchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhccccccc
Q 037085           73 CPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIM  152 (248)
Q Consensus        73 ~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~  152 (248)
                       +.+.+.++.++.||||.|+.+|+..+++.|++. .+   ..+++..|..|.||||+|+..|+..+++.|++.|+.    
T Consensus       296 -Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~-~~---~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~----  366 (929)
T KOG0510|consen  296 -GASINSKNKDEESPLHFAAIYGRINTVERLLQE-SD---TRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGAL----  366 (929)
T ss_pred             -CCcccccCCCCCCchHHHHHcccHHHHHHHHhC-cC---ccccccccccCCCchhhhhhcCHHHHHHHHHhcChh----
Confidence             556889999999999999999999999999982 22   245889999999999999999999999999999993    


Q ss_pred             cccc--ccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCC
Q 037085          153 IRIN--TVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPD  198 (248)
Q Consensus       153 ~~~~--~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~  198 (248)
                       ..+  ..|.+|.||||.|+..    ++..++++|+.+|+++......
T Consensus       367 -~~~~~e~D~dg~TaLH~Aa~~----g~~~av~~Li~~Ga~I~~~n~~  409 (929)
T KOG0510|consen  367 -FLNMSEADSDGNTALHLAAKY----GNTSAVQKLISHGADIGVKNKK  409 (929)
T ss_pred             -hhcccccccCCchhhhHHHHh----ccHHHHHHHHHcCCceeecccc
Confidence             333  4599999999999987    8999999999999999664433


No 28 
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.95  E-value=4.9e-27  Score=210.26  Aligned_cols=179  Identities=19%  Similarity=0.223  Sum_probs=115.0

Q ss_pred             hhhccCCCCHHHHHHhCC-CHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHh-CCHHHHHHHHHhCchhhhhhccCCCcH
Q 037085           10 SIKNQRGETTMHLLSTDG-DARMVRIFGENNRELCLEVDNSLMIPLHRAALE-GDSDVIRALVSICPESLEKLTSNGETA   87 (248)
Q Consensus        10 ~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~-g~~~~~~~Ll~~~~~~~~~~~~~g~t~   87 (248)
                      +..|.+|.||||+|+..| +.++++.|+..+.++ +..|..|.||||+|+.. ++.++++.|++. +.+++.+|..|.||
T Consensus       301 n~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadi-n~~d~~g~TpLh~A~~~~~~~~iv~lLl~~-gadin~~d~~G~Tp  378 (682)
T PHA02876        301 NAKNIKGETPLYLMAKNGYDTENIRTLIMLGADV-NAADRLYITPLHQASTLDRNKDIVITLLEL-GANVNARDYCDKTP  378 (682)
T ss_pred             CCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCC-CCcccCCCcHHHHHHHhCCcHHHHHHHHHc-CCCCccCCCCCCCH
Confidence            344555555555555555 355555555555554 44555555555555543 345555555554 33455566666666


Q ss_pred             HHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCc-HHHHHHHHhhcccccccccccccCCCCCCHH
Q 037085           88 LHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKL-KQIVELLIRENSNRRIMIRINTVNKQGQTAL  166 (248)
Q Consensus        88 lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~-~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl  166 (248)
                      ||+|+..++.+++++|+++|++      ++..+..|.||||+|+..++ ..++++|+++|+      +++.+|..|+|||
T Consensus       379 Lh~Aa~~~~~~iv~~Ll~~gad------~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~ga------din~~d~~G~TpL  446 (682)
T PHA02876        379 IHYAAVRNNVVIINTLLDYGAD------IEALSQKIGTALHFALCGTNPYMSVKTLIDRGA------NVNSKNKDLSTPL  446 (682)
T ss_pred             HHHHHHcCCHHHHHHHHHCCCC------ccccCCCCCchHHHHHHcCCHHHHHHHHHhCCC------CCCcCCCCCChHH
Confidence            6666666666666666666665      55566666666666665443 345666666665      7899999999999


Q ss_pred             HHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccc
Q 037085          167 QLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSW  206 (248)
Q Consensus       167 ~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~  206 (248)
                      |+|+..+   ...+++++|+++|++++.....+.+ |+..
T Consensus       447 h~Aa~~~---~~~~iv~lLl~~Gad~n~~d~~g~t-pl~~  482 (682)
T PHA02876        447 HYACKKN---CKLDVIEMLLDNGADVNAINIQNQY-PLLI  482 (682)
T ss_pred             HHHHHhC---CcHHHHHHHHHCCCCCCCCCCCCCC-HHHH
Confidence            9998752   3578999999999999988776655 5543


No 29 
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.94  E-value=1.1e-26  Score=200.71  Aligned_cols=181  Identities=15%  Similarity=0.147  Sum_probs=150.8

Q ss_pred             CCCCHHHHHHhCC------CHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHh---CCHHHHHHHHHhCchhh-hhhccCC
Q 037085           15 RGETTMHLLSTDG------DARMVRIFGENNRELCLEVDNSLMIPLHRAALE---GDSDVIRALVSICPESL-EKLTSNG   84 (248)
Q Consensus        15 ~g~t~L~~A~~~g------~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~---g~~~~~~~Ll~~~~~~~-~~~~~~g   84 (248)
                      .+.||||.|+.++      ..+++++|++.|+++ +.++..|.||||.|+..   ++.+++++|+++|. ++ +.+|..|
T Consensus        68 ~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadi-n~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Ga-din~~~d~~g  145 (494)
T PHA02989         68 YIETPLCAVLRNREITSNKIKKIVKLLLKFGADI-NLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGI-NVNDVKNSRG  145 (494)
T ss_pred             CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCC-CcccccCCCC
Confidence            5789999988754      468999999999998 78899999999988765   67899999999854 46 7888999


Q ss_pred             CcHHHHHHHc--CChHHHHHHHHHHhcccccccccc-ccCCCCcHhHHHHhCC----cHHHHHHHHhhccccc-------
Q 037085           85 ETALHLAVKK--SRSDAFQALVDEAKSHRKEHLFTW-KDKEGNTVLHLATLNK----LKQIVELLIRENSNRR-------  150 (248)
Q Consensus        85 ~t~lh~a~~~--~~~~~~~~Ll~~~~~~~~~~~~~~-~~~~g~t~Lh~A~~~~----~~~~v~~Ll~~g~~~~-------  150 (248)
                      .||||+|+..  ++.+++++|+++|++      ++. .+..|.||||+|+..+    +.+++++|++.|++..       
T Consensus       146 ~tpLh~a~~~~~~~~~iv~~Ll~~Gad------i~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~  219 (494)
T PHA02989        146 YNLLHMYLESFSVKKDVIKILLSFGVN------LFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSE  219 (494)
T ss_pred             CCHHHHHHHhccCCHHHHHHHHHcCCC------ccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccc
Confidence            9999998764  578999999999988      665 6789999999998764    8899999999988531       


Q ss_pred             -------------------------ccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccc
Q 037085          151 -------------------------IMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVS  205 (248)
Q Consensus       151 -------------------------~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~  205 (248)
                                               .+++++.+|..|+||||+|+..    ++.+++++|++.|++++.....+.+ |++
T Consensus       220 t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~----~~~~~v~~LL~~Gadin~~d~~G~T-pL~  294 (494)
T PHA02989        220 SVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKV----DNYEAFNYLLKLGDDIYNVSKDGDT-VLT  294 (494)
T ss_pred             cHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHh----cCHHHHHHHHHcCCCccccCCCCCC-HHH
Confidence                                     1235678889999999999987    7889999999999999998776665 776


Q ss_pred             ccc
Q 037085          206 WNQ  208 (248)
Q Consensus       206 ~~~  208 (248)
                      .+.
T Consensus       295 ~A~  297 (494)
T PHA02989        295 YAI  297 (494)
T ss_pred             HHH
Confidence            544


No 30 
>PHA02946 ankyin-like protein; Provisional
Probab=99.94  E-value=1e-26  Score=197.42  Aligned_cols=169  Identities=17%  Similarity=0.175  Sum_probs=146.4

Q ss_pred             chhHhhhccCCCCHHHHHHhCC--CHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccC
Q 037085            6 PQLASIKNQRGETTMHLLSTDG--DARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSN   83 (248)
Q Consensus         6 ~~~~~~~~~~g~t~L~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~   83 (248)
                      +..++.+|..|.||||+|+..+  ..+++++|+++++++....+..|.|||| |+..|+.+++++|++. +.+++.+|..
T Consensus        95 GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~-gad~~~~d~~  172 (446)
T PHA02946         95 GADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSI-GFEARIVDKF  172 (446)
T ss_pred             cCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhc-cccccccCCC
Confidence            3445678999999999999876  4899999999999985567999999997 6777999999999998 5568899999


Q ss_pred             CCcHHHHHHHcCC--hHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCC--cHHHHHHHHhhcccccccccccccC
Q 037085           84 GETALHLAVKKSR--SDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNK--LKQIVELLIRENSNRRIMIRINTVN  159 (248)
Q Consensus        84 g~t~lh~a~~~~~--~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~--~~~~v~~Ll~~g~~~~~~~~~~~~~  159 (248)
                      |+||||+|+..++  .+++++|++.|++      ++.+|..|+||||+|+..+  +.+++++|+. |+      +++.+|
T Consensus       173 G~t~Lh~A~~~~~~~~~~v~~Ll~~Gad------in~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-ga------din~~d  239 (446)
T PHA02946        173 GKNHIHRHLMSDNPKASTISWMMKLGIS------PSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-ST------DVNKQN  239 (446)
T ss_pred             CCCHHHHHHHhcCCCHHHHHHHHHcCCC------CcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CC------CCCCCC
Confidence            9999999987654  6899999999998      8999999999999999986  7899999985 66      899999


Q ss_pred             CCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhc
Q 037085          160 KQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQ  192 (248)
Q Consensus       160 ~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~  192 (248)
                      ..|+||||+|+...   ...+++++|+++|+..
T Consensus       240 ~~G~TpLh~A~~~~---~~~~~~~~Ll~~g~~~  269 (446)
T PHA02946        240 KFGDSPLTLLIKTL---SPAHLINKLLSTSNVI  269 (446)
T ss_pred             CCCCCHHHHHHHhC---ChHHHHHHHHhCCCCC
Confidence            99999999999863   2358889999988754


No 31 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.94  E-value=5.3e-26  Score=206.53  Aligned_cols=171  Identities=19%  Similarity=0.190  Sum_probs=154.1

Q ss_pred             ccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHH
Q 037085           13 NQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAV   92 (248)
Q Consensus        13 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~   92 (248)
                      +.++.++||.|+..|+.++++.|++.+.++ +..|..|.||||+|+..|+.+++++|+++ +.+++.+|.+|.||||+|+
T Consensus       522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~-n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~-gadin~~d~~G~TpL~~A~  599 (823)
T PLN03192        522 DPNMASNLLTVASTGNAALLEELLKAKLDP-DIGDSKGRTPLHIAASKGYEDCVLVLLKH-ACNVHIRDANGNTALWNAI  599 (823)
T ss_pred             CccchhHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcChHHHHHHHHhc-CCCCCCcCCCCCCHHHHHH
Confidence            445789999999999999999999999998 78999999999999999999999999998 5568899999999999999


Q ss_pred             HcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHc
Q 037085           93 KKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNAN  172 (248)
Q Consensus        93 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~  172 (248)
                      ..|+.+++++|+..++.      .  ....+.++||.|+..|+.++++.|+++|+      |+|.+|..|.||||+|+..
T Consensus       600 ~~g~~~iv~~L~~~~~~------~--~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Ga------din~~d~~G~TpLh~A~~~  665 (823)
T PLN03192        600 SAKHHKIFRILYHFASI------S--DPHAAGDLLCTAAKRNDLTAMKELLKQGL------NVDSEDHQGATALQVAMAE  665 (823)
T ss_pred             HhCCHHHHHHHHhcCcc------c--CcccCchHHHHHHHhCCHHHHHHHHHCCC------CCCCCCCCCCCHHHHHHHC
Confidence            99999999999987654      2  23567799999999999999999999998      8999999999999999987


Q ss_pred             CCCchHHHHHHHHHHhhhhcCCCCCCCCCcc
Q 037085          173 SQDSVFKEIGWIIQRAVAQQSPQLPDAGSAN  203 (248)
Q Consensus       173 ~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~  203 (248)
                          ++.+++++|+++|++++.....+...+
T Consensus       666 ----g~~~iv~~Ll~~GAdv~~~~~~g~~t~  692 (823)
T PLN03192        666 ----DHVDMVRLLIMNGADVDKANTDDDFSP  692 (823)
T ss_pred             ----CcHHHHHHHHHcCCCCCCCCCCCCCCH
Confidence                789999999999999988876664333


No 32 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.94  E-value=9.5e-27  Score=187.93  Aligned_cols=166  Identities=21%  Similarity=0.256  Sum_probs=136.4

Q ss_pred             ccCCCCHHHHHHhCCCHHHHHHHHhcCc-ch-------hhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCC
Q 037085           13 NQRGETTMHLLSTDGDARMVRIFGENNR-EL-------CLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNG   84 (248)
Q Consensus        13 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~-~~-------~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g   84 (248)
                      ..+|.|||-+|+++|+.++|++|+++.. ++       .+-...+|-+||..|+..||.++|+.|+.++ ..+|......
T Consensus        39 ~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~g-a~VN~tT~TN  117 (615)
T KOG0508|consen   39 VQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRG-ASVNDTTRTN  117 (615)
T ss_pred             ccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhc-CccccccccC
Confidence            4568899999999999999999988532 21       0112346778888888899999999999885 6678877788


Q ss_pred             CcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCC
Q 037085           85 ETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQT  164 (248)
Q Consensus        85 ~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~t  164 (248)
                      .|||-.||.-|+.+++++|+++|++      ++..|..|.|.||+|++.|+.+|+++|++.|+      |+|.++..|+|
T Consensus       118 StPLraACfDG~leivKyLvE~gad------~~IanrhGhTcLmIa~ykGh~~I~qyLle~gA------Dvn~ks~kGNT  185 (615)
T KOG0508|consen  118 STPLRAACFDGHLEIVKYLVEHGAD------PEIANRHGHTCLMIACYKGHVDIAQYLLEQGA------DVNAKSYKGNT  185 (615)
T ss_pred             CccHHHHHhcchhHHHHHHHHcCCC------CcccccCCCeeEEeeeccCchHHHHHHHHhCC------CcchhcccCch
Confidence            8899999999999999999988888      78888889999999999999999999999887      88889999999


Q ss_pred             HHHHHHHcCCCchHHHHHHHHHHhhhhcCCC
Q 037085          165 ALQLCNANSQDSVFKEIGWIIQRAVAQQSPQ  195 (248)
Q Consensus       165 pl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~  195 (248)
                      +||.|++.    ++.+|+++|+++|+.+...
T Consensus       186 ALH~caEs----G~vdivq~Ll~~ga~i~~d  212 (615)
T KOG0508|consen  186 ALHDCAES----GSVDIVQLLLKHGAKIDVD  212 (615)
T ss_pred             HHHhhhhc----ccHHHHHHHHhCCceeeec
Confidence            99998877    7888999999888877543


No 33 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.93  E-value=3.9e-26  Score=184.37  Aligned_cols=156  Identities=22%  Similarity=0.304  Sum_probs=143.4

Q ss_pred             ccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHH
Q 037085           13 NQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAV   92 (248)
Q Consensus        13 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~   92 (248)
                      ..+|-+||..|+..|++++|+.|+.+++++ +.......|||..||..|+.+++++|+++ +.+++..++.|.|+||+|+
T Consensus        81 ~IegappLWaAsaAGHl~vVk~L~~~ga~V-N~tT~TNStPLraACfDG~leivKyLvE~-gad~~IanrhGhTcLmIa~  158 (615)
T KOG0508|consen   81 TIEGAPPLWAASAAGHLEVVKLLLRRGASV-NDTTRTNSTPLRAACFDGHLEIVKYLVEH-GADPEIANRHGHTCLMIAC  158 (615)
T ss_pred             ccCCCchhhHHhccCcHHHHHHHHHhcCcc-ccccccCCccHHHHHhcchhHHHHHHHHc-CCCCcccccCCCeeEEeee
Confidence            456889999999999999999999999888 66677778999999999999999999998 5568899999999999999


Q ss_pred             HcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHc
Q 037085           93 KKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNAN  172 (248)
Q Consensus        93 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~  172 (248)
                      ..|+.+|+++|++.|++      +|.++..|+|+||.|+..|+.+++++|+++|+       .-.+|..|.|||..|...
T Consensus       159 ykGh~~I~qyLle~gAD------vn~ks~kGNTALH~caEsG~vdivq~Ll~~ga-------~i~~d~~GmtPL~~Aa~t  225 (615)
T KOG0508|consen  159 YKGHVDIAQYLLEQGAD------VNAKSYKGNTALHDCAESGSVDIVQLLLKHGA-------KIDVDGHGMTPLLLAAVT  225 (615)
T ss_pred             ccCchHHHHHHHHhCCC------cchhcccCchHHHhhhhcccHHHHHHHHhCCc-------eeeecCCCCchHHHHhhh
Confidence            99999999999999999      99999999999999999999999999999997       344677799999999887


Q ss_pred             CCCchHHHHHHHHHH
Q 037085          173 SQDSVFKEIGWIIQR  187 (248)
Q Consensus       173 ~~~~~~~~i~~~L~~  187 (248)
                          ++.+++++|+.
T Consensus       226 ----G~~~iVe~L~~  236 (615)
T KOG0508|consen  226 ----GHTDIVERLLQ  236 (615)
T ss_pred             ----cchHHHHHHhc
Confidence                78899999985


No 34 
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.93  E-value=4.2e-26  Score=194.63  Aligned_cols=153  Identities=25%  Similarity=0.326  Sum_probs=139.0

Q ss_pred             chhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHH-hCchhhhhhccCC
Q 037085            6 PQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVS-ICPESLEKLTSNG   84 (248)
Q Consensus         6 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~-~~~~~~~~~~~~g   84 (248)
                      .++++..|.+|.||||+|++.|+.+++..|+..|+++ +.++.++.||||.|++.|+..+++.||+ .+-...+..|-.|
T Consensus       263 kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I-~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g  341 (929)
T KOG0510|consen  263 KELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASI-NSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHG  341 (929)
T ss_pred             HHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcc-cccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccC
Confidence            4577889999999999999999999999999999999 8899999999999999999999999999 4445678889999


Q ss_pred             CcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCC
Q 037085           85 ETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQT  164 (248)
Q Consensus        85 ~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~t  164 (248)
                      .||||+|+.+||..++++|+++|+....   ....|.+|+||||.|+..|+..+|++|+.+|+      ++..+|..|.+
T Consensus       342 ~tpLHlaa~~gH~~v~qlLl~~GA~~~~---~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga------~I~~~n~~g~S  412 (929)
T KOG0510|consen  342 MTPLHLAAKSGHDRVVQLLLNKGALFLN---MSEADSDGNTALHLAAKYGNTSAVQKLISHGA------DIGVKNKKGKS  412 (929)
T ss_pred             CCchhhhhhcCHHHHHHHHHhcChhhhc---ccccccCCchhhhHHHHhccHHHHHHHHHcCC------ceeeccccccc
Confidence            9999999999999999999999988321   11459999999999999999999999999998      88899999998


Q ss_pred             HHHH
Q 037085          165 ALQL  168 (248)
Q Consensus       165 pl~~  168 (248)
                      ++++
T Consensus       413 A~~~  416 (929)
T KOG0510|consen  413 AFDT  416 (929)
T ss_pred             cccc
Confidence            8883


No 35 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.93  E-value=1.3e-25  Score=176.07  Aligned_cols=164  Identities=26%  Similarity=0.337  Sum_probs=146.0

Q ss_pred             HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHh-----CCHHHHHHHHHhCchhhhhhccC
Q 037085            9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALE-----GDSDVIRALVSICPESLEKLTSN   83 (248)
Q Consensus         9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~-----g~~~~~~~Ll~~~~~~~~~~~~~   83 (248)
                      ++..|.+|.|+||||+.++|+++|+.||+.+-...+.++.-|+||+++++-.     .+.++|..|+.. ++....-...
T Consensus       261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~m-gnVNaKAsQ~  339 (452)
T KOG0514|consen  261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKM-GDVNAKASQH  339 (452)
T ss_pred             hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhc-cCcchhhhhh
Confidence            5678999999999999999999999999999877799999999999998753     467899999987 4433333567


Q ss_pred             CCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCC
Q 037085           84 GETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQ  163 (248)
Q Consensus        84 g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~  163 (248)
                      |+|+|++|+..|+.++++.|+.+|++      +|.+|.+|.|+|+.|+.+|+.+++++||....     +|+...|.+|-
T Consensus       340 gQTALMLAVSHGr~d~vk~LLacgAd------VNiQDdDGSTALMCA~EHGhkEivklLLA~p~-----cd~sLtD~DgS  408 (452)
T KOG0514|consen  340 GQTALMLAVSHGRVDMVKALLACGAD------VNIQDDDGSTALMCAAEHGHKEIVKLLLAVPS-----CDISLTDVDGS  408 (452)
T ss_pred             cchhhhhhhhcCcHHHHHHHHHccCC------CccccCCccHHHhhhhhhChHHHHHHHhccCc-----ccceeecCCCc
Confidence            99999999999999999999999999      99999999999999999999999999998765     68999999999


Q ss_pred             CHHHHHHHcCCCchHHHHHHHHHHh
Q 037085          164 TALQLCNANSQDSVFKEIGWIIQRA  188 (248)
Q Consensus       164 tpl~~a~~~~~~~~~~~i~~~L~~~  188 (248)
                      |+|.+|...    ++.+|.-+|..+
T Consensus       409 TAl~IAlea----gh~eIa~mlYa~  429 (452)
T KOG0514|consen  409 TALSIALEA----GHREIAVMLYAH  429 (452)
T ss_pred             hhhhhHHhc----CchHHHHHHHHH
Confidence            999999988    677887777654


No 36 
>PHA02917 ankyrin-like protein; Provisional
Probab=99.93  E-value=3.4e-25  Score=195.19  Aligned_cols=184  Identities=14%  Similarity=0.124  Sum_probs=148.4

Q ss_pred             hHhhhccCCCCHHHHHHhC---CCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHH----HHHHHHHhCchhhhhh
Q 037085            8 LASIKNQRGETTMHLLSTD---GDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSD----VIRALVSICPESLEKL   80 (248)
Q Consensus         8 ~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~----~~~~Ll~~~~~~~~~~   80 (248)
                      ..+.+|.+|.||||+|+..   |+.+++++|++.|+++ +.++..|.||||+|+..|+.+    +++.|++.++. .+..
T Consensus        24 ~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v-~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~-~n~~  101 (661)
T PHA02917         24 PNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNP-LHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGY-SNIN  101 (661)
T ss_pred             cccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCc-cccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCC-CCCC
Confidence            3456799999999997555   8899999999999998 688999999999999999854    55677766432 3332


Q ss_pred             ccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHH--hCCcHHHHHHHHhhccccccccccccc
Q 037085           81 TSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLAT--LNKLKQIVELLIRENSNRRIMIRINTV  158 (248)
Q Consensus        81 ~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~--~~~~~~~v~~Ll~~g~~~~~~~~~~~~  158 (248)
                      +  ..+++|+|+..++.+++++|+++|++      ++.+|..|.||||.++  ..++.+++++|+++|+      +++.+
T Consensus       102 ~--~~~~~~~a~~~~~~e~vk~Ll~~Gad------in~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga------~vn~~  167 (661)
T PHA02917        102 D--FNIFSYMKSKNVDVDLIKVLVEHGFD------LSVKCENHRSVIENYVMTDDPVPEIIDLFIENGC------SVLYE  167 (661)
T ss_pred             C--cchHHHHHhhcCCHHHHHHHHHcCCC------CCccCCCCccHHHHHHHccCCCHHHHHHHHHcCC------Ccccc
Confidence            2  23677889999999999999999999      9999999999999654  4689999999999998      66655


Q ss_pred             CC---CC-----------CCHHHHHHHcC-------CCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085          159 NK---QG-----------QTALQLCNANS-------QDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ  208 (248)
Q Consensus       159 ~~---~g-----------~tpl~~a~~~~-------~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~  208 (248)
                      |.   .|           .||||+|+...       ...++.+++++|+++|++++....++.+ |++.+.
T Consensus       168 d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~T-pLh~A~  237 (661)
T PHA02917        168 DEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCT-ALQYYI  237 (661)
T ss_pred             ccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCc-HHHHHH
Confidence            43   34           59999997521       1235789999999999999998877666 777655


No 37 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.92  E-value=9.6e-26  Score=202.30  Aligned_cols=187  Identities=20%  Similarity=0.260  Sum_probs=141.4

Q ss_pred             hHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhC-CHHHHHHHHHhCchhhhhhccCCCc
Q 037085            8 LASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEG-DSDVIRALVSICPESLEKLTSNGET   86 (248)
Q Consensus         8 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g-~~~~~~~Ll~~~~~~~~~~~~~g~t   86 (248)
                      ..+..+..|.||||.|+.+++.++++.+++++++. +..+..|+||+|+|+..| ..+....+++. +.+++.....|.|
T Consensus       399 ~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~-~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~-g~~~n~~s~~G~T  476 (1143)
T KOG4177|consen  399 DPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASP-NAKAKLGYTPLHVAAKKGRYLQIARLLLQY-GADPNAVSKQGFT  476 (1143)
T ss_pred             CcccCCCCCcceeeehhhccCcceEEEEeccCCCh-hhHhhcCCChhhhhhhcccHhhhhhhHhhc-CCCcchhccccCc
Confidence            35556666666666666666666666666666666 566667777777777776 55555555554 4556666677777


Q ss_pred             HHHHHHHcCChHHHHHHHHHHhccc---------------------------cccccccccCCCCcHhHHHHhCCcHHHH
Q 037085           87 ALHLAVKKSRSDAFQALVDEAKSHR---------------------------KEHLFTWKDKEGNTVLHLATLNKLKQIV  139 (248)
Q Consensus        87 ~lh~a~~~~~~~~~~~Ll~~~~~~~---------------------------~~~~~~~~~~~g~t~Lh~A~~~~~~~~v  139 (248)
                      |||+|+..|+.+++..+++.++...                           .....+.++.+|.||||+|+..|+.++|
T Consensus       477 ~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~V  556 (1143)
T KOG4177|consen  477 PLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLV  556 (1143)
T ss_pred             chhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHH
Confidence            7777777777766666665442211                           2333778999999999999999999999


Q ss_pred             HHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccccc
Q 037085          140 ELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWN  207 (248)
Q Consensus       140 ~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~  207 (248)
                      ++|+++|+      |++++++.|+||||.|+..    ++.+|+++|+++|++++....++.+ |++.+
T Consensus       557 kfLLe~gA------dv~ak~~~G~TPLH~Aa~~----G~~~i~~LLlk~GA~vna~d~~g~T-pL~iA  613 (1143)
T KOG4177|consen  557 KFLLEHGA------DVNAKDKLGYTPLHQAAQQ----GHNDIAELLLKHGASVNAADLDGFT-PLHIA  613 (1143)
T ss_pred             HHhhhCCc------cccccCCCCCChhhHHHHc----ChHHHHHHHHHcCCCCCcccccCcc-hhHHH
Confidence            99999998      8999999999999999988    7999999999999999999988877 65533


No 38 
>PHA02741 hypothetical protein; Provisional
Probab=99.91  E-value=1.4e-23  Score=156.18  Aligned_cols=133  Identities=21%  Similarity=0.286  Sum_probs=107.7

Q ss_pred             hhcCCCCcHHHHHHHhCCHHHHHHHHHhC-----chhhhhhccCCCcHHHHHHHcCC----hHHHHHHHHHHhccccccc
Q 037085           45 EVDNSLMIPLHRAALEGDSDVIRALVSIC-----PESLEKLTSNGETALHLAVKKSR----SDAFQALVDEAKSHRKEHL  115 (248)
Q Consensus        45 ~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~-----~~~~~~~~~~g~t~lh~a~~~~~----~~~~~~Ll~~~~~~~~~~~  115 (248)
                      .++..|.||||+|+..|+.++++.|+...     +..++.+|..|.||||+|+..++    .+++++|+..|++      
T Consensus        16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gad------   89 (169)
T PHA02741         16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGAD------   89 (169)
T ss_pred             ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCC------
Confidence            45677888888888888888888876431     34567788888999999988888    4788888888877      


Q ss_pred             cccccC-CCCcHhHHHHhCCcHHHHHHHHh-hcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcC
Q 037085          116 FTWKDK-EGNTVLHLATLNKLKQIVELLIR-ENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQS  193 (248)
Q Consensus       116 ~~~~~~-~g~t~Lh~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~  193 (248)
                      ++.++. .|+||||+|+..++.+++++|++ .|+      +++.+|..|.|||++|...    +..+++++|++.++...
T Consensus        90 in~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~------~~~~~n~~g~tpL~~A~~~----~~~~iv~~L~~~~~~~~  159 (169)
T PHA02741         90 INAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGI------DLHFCNADNKSPFELAIDN----EDVAMMQILREIVATSR  159 (169)
T ss_pred             CCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCC------CCCcCCCCCCCHHHHHHHC----CCHHHHHHHHHHHHHhc
Confidence            777774 89999999999999999999887 465      7888888999999999877    67788888888887754


No 39 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.91  E-value=1.2e-23  Score=155.91  Aligned_cols=140  Identities=21%  Similarity=0.243  Sum_probs=103.4

Q ss_pred             hhhcCCCCcHHHHHHHhCCH----HHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHH---HHHHHHHHhcccccccc
Q 037085           44 LEVDNSLMIPLHRAALEGDS----DVIRALVSICPESLEKLTSNGETALHLAVKKSRSDA---FQALVDEAKSHRKEHLF  116 (248)
Q Consensus        44 ~~~~~~g~t~L~~A~~~g~~----~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~---~~~Ll~~~~~~~~~~~~  116 (248)
                      ...+.++.++||.||+.|+.    +++++|++. +..++.+|..|+||||+|+..++.++   +++|++.|++      +
T Consensus        14 ~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~-g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gad------i   86 (166)
T PHA02743         14 VEIDEDEQNTFLRICRTGNIYELMEVAPFISGD-GHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGAD------I   86 (166)
T ss_pred             hhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhc-chhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCC------C
Confidence            34566777788888888877    444455554 44466777788888888888777554   6788888777      7


Q ss_pred             cccc-CCCCcHhHHHHhCCcHHHHHHHHh-hcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCC
Q 037085          117 TWKD-KEGNTVLHLATLNKLKQIVELLIR-ENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSP  194 (248)
Q Consensus       117 ~~~~-~~g~t~Lh~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~  194 (248)
                      +.++ ..|.||||+|+..++.+++++|+. .|+      +++.+|..|.||||+|+..    +..+++++|+++|+++++
T Consensus        87 n~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~ga------d~~~~d~~g~tpL~~A~~~----~~~~iv~~Ll~~ga~~~~  156 (166)
T PHA02743         87 NARELGTGNTLLHIAASTKNYELAEWLCRQLGV------NLGAINYQHETAYHIAYKM----RDRRMMEILRANGAVCDD  156 (166)
T ss_pred             CCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCC------CccCcCCCCCCHHHHHHHc----CCHHHHHHHHHcCCCCCC
Confidence            7777 478888888888888888888884 565      7777888888888888776    567788888888888877


Q ss_pred             CCCCCC
Q 037085          195 QLPDAG  200 (248)
Q Consensus       195 ~~~~~~  200 (248)
                      +...+.
T Consensus       157 ~~~~~~  162 (166)
T PHA02743        157 PLSIGL  162 (166)
T ss_pred             cccCCc
Confidence            665543


No 40 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.91  E-value=5e-24  Score=156.60  Aligned_cols=166  Identities=20%  Similarity=0.171  Sum_probs=126.8

Q ss_pred             ccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHH
Q 037085           13 NQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAV   92 (248)
Q Consensus        13 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~   92 (248)
                      +--+++|+.+++...+.+.+..+.+..   .+..|+.|+|||.+|++.|+..++++||+.+ .++....++..++|.+|+
T Consensus       126 s~~p~s~~slsVhql~L~~~~~~~~n~---VN~~De~GfTpLiWAaa~G~i~vV~fLL~~G-Adp~~lgk~resALsLAt  201 (296)
T KOG0502|consen  126 SLMPWSPLSLSVHQLHLDVVDLLVNNK---VNACDEFGFTPLIWAAAKGHIPVVQFLLNSG-ADPDALGKYRESALSLAT  201 (296)
T ss_pred             ccccCChhhHHHHHHHHHHHHHHhhcc---ccCccccCchHhHHHHhcCchHHHHHHHHcC-CChhhhhhhhhhhHhHHh
Confidence            334555555555555555544443322   2566888999999999999999999999884 457777788889999999


Q ss_pred             HcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHc
Q 037085           93 KKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNAN  172 (248)
Q Consensus        93 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~  172 (248)
                      +.|..+++++|+.++.+      +|..|.+|-|||-||++.++.++++.|+..|+      |++..+..|+++++.|+..
T Consensus       202 ~ggytdiV~lLL~r~vd------VNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGA------d~t~e~dsGy~~mdlAVal  269 (296)
T KOG0502|consen  202 RGGYTDIVELLLTREVD------VNVYDWNGGTPLLYAVRGNHVKCVESLLNSGA------DVTQEDDSGYWIMDLAVAL  269 (296)
T ss_pred             cCChHHHHHHHHhcCCC------cceeccCCCceeeeeecCChHHHHHHHHhcCC------CcccccccCCcHHHHHHHh
Confidence            99999999999998888      88899999999999999999999999999988      7888888999999998877


Q ss_pred             CCCchHHHHHHHHHHhhhhcCCCCCCC
Q 037085          173 SQDSVFKEIGWIIQRAVAQQSPQLPDA  199 (248)
Q Consensus       173 ~~~~~~~~i~~~L~~~g~~~~~~~~~~  199 (248)
                          ++. +++..++..+....+....
T Consensus       270 ----Gyr-~Vqqvie~h~lkl~Q~~~~  291 (296)
T KOG0502|consen  270 ----GYR-IVQQVIEKHALKLCQDSEK  291 (296)
T ss_pred             ----hhH-HHHHHHHHHHHHHhhcccC
Confidence                444 6666666666665555433


No 41 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.91  E-value=2e-23  Score=154.78  Aligned_cols=141  Identities=16%  Similarity=0.168  Sum_probs=122.1

Q ss_pred             HhhhccCCCCHHHHHHhCCCH----HHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHH---HHHHHHhCchhhhhhc
Q 037085            9 ASIKNQRGETTMHLLSTDGDA----RMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDV---IRALVSICPESLEKLT   81 (248)
Q Consensus         9 ~~~~~~~g~t~L~~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~---~~~Ll~~~~~~~~~~~   81 (248)
                      +...+.++.++||.||+.|+.    +++++|++.+..+ +.+|..|.||||+|+..|+.+.   +++|++.+ ..++.++
T Consensus        13 ~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~-~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G-adin~~d   90 (166)
T PHA02743         13 AVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLL-HRYDHHGRQCTHMVAWYDRANAVMKIELLVNMG-ADINARE   90 (166)
T ss_pred             HhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhh-hccCCCCCcHHHHHHHhCccCHHHHHHHHHHcC-CCCCCCC
Confidence            445678899999999999998    5666777777776 7789999999999999988654   78999885 5578887


Q ss_pred             -cCCCcHHHHHHHcCChHHHHHHHH-HHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccC
Q 037085           82 -SNGETALHLAVKKSRSDAFQALVD-EAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVN  159 (248)
Q Consensus        82 -~~g~t~lh~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~  159 (248)
                       ..|.||||+|+..++.+++++|+. .|++      ++.++..|.||||+|+..++.+++++|+++|+      +++.++
T Consensus        91 ~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad------~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga------~~~~~~  158 (166)
T PHA02743         91 LGTGNTLLHIAASTKNYELAEWLCRQLGVN------LGAINYQHETAYHIAYKMRDRRMMEILRANGA------VCDDPL  158 (166)
T ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHhccCCC------ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCCCcc
Confidence             589999999999999999999995 6777      88899999999999999999999999999998      777777


Q ss_pred             CCCC
Q 037085          160 KQGQ  163 (248)
Q Consensus       160 ~~g~  163 (248)
                      ..|.
T Consensus       159 ~~~~  162 (166)
T PHA02743        159 SIGL  162 (166)
T ss_pred             cCCc
Confidence            7664


No 42 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.90  E-value=2.1e-23  Score=172.82  Aligned_cols=175  Identities=13%  Similarity=0.023  Sum_probs=148.4

Q ss_pred             HHHhCCCHHHHHHHHhcCcchh-----hhhcCCCCcHHHHHHH--hCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHc
Q 037085           22 LLSTDGDARMVRIFGENNRELC-----LEVDNSLMIPLHRAAL--EGDSDVIRALVSICPESLEKLTSNGETALHLAVKK   94 (248)
Q Consensus        22 ~A~~~g~~~~v~~Ll~~~~~~~-----~~~~~~g~t~L~~A~~--~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~   94 (248)
                      +|+..+..+++++|+.++..+.     ..++..++|+||+++.  .|+.+++++|+++|.+ ++.  .++.||+|.|+..
T Consensus        83 ~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GAD-In~--~~~~t~lh~A~~~  159 (437)
T PHA02795         83 LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAV-IYK--IECLNAYFRGICK  159 (437)
T ss_pred             HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCC-CCC--CCCCCHHHHHHHc
Confidence            8999999999999999999862     1578889999999999  8999999999999654 555  3568999999999


Q ss_pred             CChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCC
Q 037085           95 SRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQ  174 (248)
Q Consensus        95 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~  174 (248)
                      ++.+++++|+++|++.......+..+..+.|++|.|+..++.+++++|+++|+      |+|.+|..|+||||+|+..  
T Consensus       160 ~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GA------DIN~kD~~G~TpLh~Aa~~--  231 (437)
T PHA02795        160 KESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIE------DINQLDAGGRTLLYRAIYA--  231 (437)
T ss_pred             CcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcC------CcCcCCCCCCCHHHHHHHc--
Confidence            99999999999997532111122223568899999999999999999999998      8999999999999999988  


Q ss_pred             CchHHHHHHHHHHhhhhcCCCCCCCCCccccccccC
Q 037085          175 DSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQTR  210 (248)
Q Consensus       175 ~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~~~  210 (248)
                        ++.+++++|+++|++++.+...+.+ |++.+...
T Consensus       232 --g~~eiVelLL~~GAdIN~~d~~G~T-pLh~Aa~~  264 (437)
T PHA02795        232 --GYIDLVSWLLENGANVNAVMSNGYT-CLDVAVDR  264 (437)
T ss_pred             --CCHHHHHHHHHCCCCCCCcCCCCCC-HHHHHHHc
Confidence              7899999999999999998876655 88766543


No 43 
>PHA02741 hypothetical protein; Provisional
Probab=99.90  E-value=2.7e-23  Score=154.70  Aligned_cols=133  Identities=20%  Similarity=0.271  Sum_probs=117.5

Q ss_pred             hhHhhhccCCCCHHHHHHhCCCHHHHHHHHhc------CcchhhhhcCCCCcHHHHHHHhCC----HHHHHHHHHhCchh
Q 037085            7 QLASIKNQRGETTMHLLSTDGDARMVRIFGEN------NRELCLEVDNSLMIPLHRAALEGD----SDVIRALVSICPES   76 (248)
Q Consensus         7 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~------~~~~~~~~~~~g~t~L~~A~~~g~----~~~~~~Ll~~~~~~   76 (248)
                      .+++.+|..|.|+||+|+..|+.++++.|+..      +..+ +.+|..|.||||+|+..|+    .+++++|++.+ .+
T Consensus        12 ~~~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~i-n~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~g-ad   89 (169)
T PHA02741         12 EMIAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAAL-NATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELG-AD   89 (169)
T ss_pred             HHhhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhh-hccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcC-CC
Confidence            45678899999999999999999999998653      3444 7789999999999999998    58899999985 45


Q ss_pred             hhhhcc-CCCcHHHHHHHcCChHHHHHHHH-HHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcc
Q 037085           77 LEKLTS-NGETALHLAVKKSRSDAFQALVD-EAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENS  147 (248)
Q Consensus        77 ~~~~~~-~g~t~lh~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~  147 (248)
                      ++.++. .|.||||+|+..++.+++++|+. .+++      ++..|..|.||||+|+..++.+++++|++.++
T Consensus        90 in~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~------~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~  156 (169)
T PHA02741         90 INAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGID------LHFCNADNKSPFELAIDNEDVAMMQILREIVA  156 (169)
T ss_pred             CCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCC------CCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Confidence            777774 89999999999999999999997 4776      88899999999999999999999999999876


No 44 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.90  E-value=1.9e-23  Score=189.93  Aligned_cols=149  Identities=18%  Similarity=0.243  Sum_probs=135.3

Q ss_pred             hhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCc
Q 037085            7 QLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGET   86 (248)
Q Consensus         7 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t   86 (248)
                      ...+..|..|.||||+|+..|+.+++++|+++++++ +.+|.+|.||||+|+..|+.+++++|+..+.. .+  ...+.+
T Consensus       549 ~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadi-n~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~-~~--~~~~~~  624 (823)
T PLN03192        549 LDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNV-HIRDANGNTALWNAISAKHHKIFRILYHFASI-SD--PHAAGD  624 (823)
T ss_pred             CCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCC-CCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcc-cC--cccCch
Confidence            346778999999999999999999999999999998 88999999999999999999999999986432 22  356789


Q ss_pred             HHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCC-CCH
Q 037085           87 ALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQG-QTA  165 (248)
Q Consensus        87 ~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g-~tp  165 (248)
                      +||.|+..|+.++++.|+++|++      ++.+|..|+||||+|+..|+.+++++|+++|+      |++..|..| .||
T Consensus       625 ~L~~Aa~~g~~~~v~~Ll~~Gad------in~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GA------dv~~~~~~g~~t~  692 (823)
T PLN03192        625 LLCTAAKRNDLTAMKELLKQGLN------VDSEDHQGATALQVAMAEDHVDMVRLLIMNGA------DVDKANTDDDFSP  692 (823)
T ss_pred             HHHHHHHhCCHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCC------CCCCCCCCCCCCH
Confidence            99999999999999999999998      89999999999999999999999999999998      889999888 899


Q ss_pred             HHHHHH
Q 037085          166 LQLCNA  171 (248)
Q Consensus       166 l~~a~~  171 (248)
                      ++++..
T Consensus       693 ~~l~~~  698 (823)
T PLN03192        693 TELREL  698 (823)
T ss_pred             HHHHHH
Confidence            988744


No 45 
>PHA02730 ankyrin-like protein; Provisional
Probab=99.90  E-value=5.6e-23  Score=177.91  Aligned_cols=193  Identities=13%  Similarity=0.112  Sum_probs=148.5

Q ss_pred             HhhhccCCCCHHHHHHhCC---CHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhC--CHHHHHHHHHhCch-hhhhhcc
Q 037085            9 ASIKNQRGETTMHLLSTDG---DARMVRIFGENNRELCLEVDNSLMIPLHRAALEG--DSDVIRALVSICPE-SLEKLTS   82 (248)
Q Consensus         9 ~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g--~~~~~~~Ll~~~~~-~~~~~~~   82 (248)
                      ...+|.+|+||||+|+..|   +.+++++|+++|+++ +.+|..|.||||+|+..+  +.+++++|++.+.. ..+..+.
T Consensus        34 n~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdi-n~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~  112 (672)
T PHA02730         34 SKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVER-LCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSN  112 (672)
T ss_pred             hhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCC-cccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccc
Confidence            3477889999999999997   599999999999999 789999999999999976  79999999998532 3455666


Q ss_pred             CCCcHHHHHHH--cCChHHHHHHHH-HHhcccccccccccc-CCCCcHhHHHHhCCcHHHHHHHHhhccccccccc--cc
Q 037085           83 NGETALHLAVK--KSRSDAFQALVD-EAKSHRKEHLFTWKD-KEGNTVLHLATLNKLKQIVELLIRENSNRRIMIR--IN  156 (248)
Q Consensus        83 ~g~t~lh~a~~--~~~~~~~~~Ll~-~~~~~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~--~~  156 (248)
                      .+.+|||.++.  .++.+++++|+. .+.++.  ...+..+ ..|-+|+++++..++.++|++|+++|++.. |..  .+
T Consensus       113 ~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~--~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~-g~~~~~~  189 (672)
T PHA02730        113 INDFDLYSYMSSDNIDLRLLKYLIVDKRIRPS--KNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYST-GYVFRSC  189 (672)
T ss_pred             cCCchHHHHHHhcCCcHHHHHHHHHhcCCChh--hhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCccc-ccccccc
Confidence            78899999888  888999999997 444421  1111222 278999999999999999999999998421 111  12


Q ss_pred             ccCCCC-CCHHHHHHHc--CCCchHHHHHHHHHHhhhhcCCCCCCCCCccccc
Q 037085          157 TVNKQG-QTALQLCNAN--SQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSW  206 (248)
Q Consensus       157 ~~~~~g-~tpl~~a~~~--~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~  206 (248)
                      ..+..+ .|.|+++...  .......+++++|+++||+++.+..++.+ |++.
T Consensus       190 ~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~T-pLh~  241 (672)
T PHA02730        190 MYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSL-PIQY  241 (672)
T ss_pred             cccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCC-HHHH
Confidence            234444 4556645433  13456889999999999999999987776 8764


No 46 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.90  E-value=2.5e-24  Score=158.22  Aligned_cols=179  Identities=20%  Similarity=0.120  Sum_probs=162.7

Q ss_pred             ccCchhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhcc
Q 037085            3 RLWPQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTS   82 (248)
Q Consensus         3 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~   82 (248)
                      ..+|+.+...+++|++.++.|+-.++...++..+.++... +..+..+.+|+.+++...+.+++..+.+.   .+|..|+
T Consensus        83 ~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rg-nevs~~p~s~~slsVhql~L~~~~~~~~n---~VN~~De  158 (296)
T KOG0502|consen   83 QLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARG-NEVSLMPWSPLSLSVHQLHLDVVDLLVNN---KVNACDE  158 (296)
T ss_pred             ccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccC-CccccccCChhhHHHHHHHHHHHHHHhhc---cccCccc
Confidence            3466777788899999999999999999999999999988 78899999999999998888888877665   3788999


Q ss_pred             CCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCC
Q 037085           83 NGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQG  162 (248)
Q Consensus        83 ~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g  162 (248)
                      .|.|||.||+.+|++.++++|++.|++      .....++..|+|.+|++.|..++|++|+.++.      |+|.-|.+|
T Consensus       159 ~GfTpLiWAaa~G~i~vV~fLL~~GAd------p~~lgk~resALsLAt~ggytdiV~lLL~r~v------dVNvyDwNG  226 (296)
T KOG0502|consen  159 FGFTPLIWAAAKGHIPVVQFLLNSGAD------PDALGKYRESALSLATRGGYTDIVELLLTREV------DVNVYDWNG  226 (296)
T ss_pred             cCchHhHHHHhcCchHHHHHHHHcCCC------hhhhhhhhhhhHhHHhcCChHHHHHHHHhcCC------CcceeccCC
Confidence            999999999999999999999999999      77888999999999999999999999999986      999999999


Q ss_pred             CCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCC
Q 037085          163 QTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGS  201 (248)
Q Consensus       163 ~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~  201 (248)
                      -|||-+|+..    ++.++++.|+..|+++.+....+-.
T Consensus       227 gTpLlyAvrg----nhvkcve~Ll~sGAd~t~e~dsGy~  261 (296)
T KOG0502|consen  227 GTPLLYAVRG----NHVKCVESLLNSGADVTQEDDSGYW  261 (296)
T ss_pred             CceeeeeecC----ChHHHHHHHHhcCCCcccccccCCc
Confidence            9999999876    8999999999999999987765543


No 47 
>PHA02917 ankyrin-like protein; Provisional
Probab=99.90  E-value=4.9e-23  Score=181.60  Aligned_cols=168  Identities=20%  Similarity=0.160  Sum_probs=134.7

Q ss_pred             hhHhhhccCCCCHHHHHHhCCCHH----HHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhcc
Q 037085            7 QLASIKNQRGETTMHLLSTDGDAR----MVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTS   82 (248)
Q Consensus         7 ~~~~~~~~~g~t~L~~A~~~g~~~----~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~   82 (248)
                      ...+..+..|.||||+|+..|+.+    +++.|++.+... +..+  ..+++|+|+..|+.+++++|++. +.+++.+|.
T Consensus        59 a~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~-n~~~--~~~~~~~a~~~~~~e~vk~Ll~~-Gadin~~d~  134 (661)
T PHA02917         59 TNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYS-NIND--FNIFSYMKSKNVDVDLIKVLVEH-GFDLSVKCE  134 (661)
T ss_pred             CCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCC-CCCC--cchHHHHHhhcCCHHHHHHHHHc-CCCCCccCC
Confidence            334577899999999999999854    567787765432 2222  23677889999999999999998 566899999


Q ss_pred             CCCcHHHHHH--HcCChHHHHHHHHHHhccccccccccccC---CC-----------CcHhHHHHh-----------CCc
Q 037085           83 NGETALHLAV--KKSRSDAFQALVDEAKSHRKEHLFTWKDK---EG-----------NTVLHLATL-----------NKL  135 (248)
Q Consensus        83 ~g~t~lh~a~--~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~---~g-----------~t~Lh~A~~-----------~~~  135 (248)
                      .|.||||.++  ..++.+++++|+++|++      ++..|.   .|           .||||+|+.           .++
T Consensus       135 ~g~T~L~~~~a~~~~~~eivklLi~~Ga~------vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~  208 (661)
T PHA02917        135 NHRSVIENYVMTDDPVPEIIDLFIENGCS------VLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVR  208 (661)
T ss_pred             CCccHHHHHHHccCCCHHHHHHHHHcCCC------ccccccccccccccccccccccccHHHHHHhhcccccccccccCc
Confidence            9999999643  57899999999999998      554432   33           599999986           458


Q ss_pred             HHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcC
Q 037085          136 KQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQS  193 (248)
Q Consensus       136 ~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~  193 (248)
                      .+++++|+++|+      |++.+|..|.||||+|+..++.  ..+++++|++ |++..
T Consensus       209 ~eiv~~Li~~Ga------dvn~~d~~G~TpLh~A~~~g~~--~~eivk~Li~-g~d~~  257 (661)
T PHA02917        209 PEVVKCLINHGI------KPSSIDKNYCTALQYYIKSSHI--DIDIVKLLMK-GIDNT  257 (661)
T ss_pred             HHHHHHHHHCCC------CcccCCCCCCcHHHHHHHcCCC--cHHHHHHHHh-CCccc
Confidence            899999999998      8999999999999999988432  3589999975 88764


No 48 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.90  E-value=1.3e-23  Score=188.76  Aligned_cols=169  Identities=24%  Similarity=0.303  Sum_probs=136.5

Q ss_pred             chhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCC
Q 037085            6 PQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGE   85 (248)
Q Consensus         6 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~   85 (248)
                      +...+..-..|.||||+|+..|+.++++.+++.+... +.....+.+++|.|...+...+.+.++.. +..++.++..|.
T Consensus       464 g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~-~~~~~~~l~~lhla~~~~~v~~~~~l~~~-ga~v~~~~~r~~  541 (1143)
T KOG4177|consen  464 GADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGAND-NLDAKKGLTPLHLAADEDTVKVAKILLEH-GANVDLRTGRGY  541 (1143)
T ss_pred             CCCcchhccccCcchhhhhccCCchHHHHhhhcCCcc-CccchhccchhhhhhhhhhHHHHHHHhhc-CCceehhccccc
Confidence            3344555556666666666666666666666665444 44455566666666666666666666665 344677788899


Q ss_pred             cHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCH
Q 037085           86 TALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTA  165 (248)
Q Consensus        86 t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tp  165 (248)
                      ||||+|+.+|+.++|++|+++|++      ++.+++.|+||||.|+..|+.+++++|+++|+      ++|+.+.+|.||
T Consensus       542 TpLh~A~~~g~v~~VkfLLe~gAd------v~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA------~vna~d~~g~Tp  609 (1143)
T KOG4177|consen  542 TPLHVAVHYGNVDLVKFLLEHGAD------VNAKDKLGYTPLHQAAQQGHNDIAELLLKHGA------SVNAADLDGFTP  609 (1143)
T ss_pred             chHHHHHhcCCchHHHHhhhCCcc------ccccCCCCCChhhHHHHcChHHHHHHHHHcCC------CCCcccccCcch
Confidence            999999999999999999999999      89999999999999999999999999999998      899999999999


Q ss_pred             HHHHHHcCCCchHHHHHHHHHHhhhhc
Q 037085          166 LQLCNANSQDSVFKEIGWIIQRAVAQQ  192 (248)
Q Consensus       166 l~~a~~~~~~~~~~~i~~~L~~~g~~~  192 (248)
                      |++|+..    ++.++++.|+..+++.
T Consensus       610 L~iA~~l----g~~~~~k~l~~~~~~~  632 (1143)
T KOG4177|consen  610 LHIAVRL----GYLSVVKLLKVVTATP  632 (1143)
T ss_pred             hHHHHHh----cccchhhHHHhccCcc
Confidence            9999988    7899999999999985


No 49 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.90  E-value=1.6e-22  Score=161.32  Aligned_cols=157  Identities=11%  Similarity=0.047  Sum_probs=132.2

Q ss_pred             HhhhccCCCCHH-HHHHhCCCHHHHHHHHhcCcchhhhh----cCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhh-cc
Q 037085            9 ASIKNQRGETTM-HLLSTDGDARMVRIFGENNRELCLEV----DNSLMIPLHRAALEGDSDVIRALVSICPESLEKL-TS   82 (248)
Q Consensus         9 ~~~~~~~g~t~L-~~A~~~g~~~~v~~Ll~~~~~~~~~~----~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~-~~   82 (248)
                      +..+|..|.|++ |.|+..|+.+++++|++.|+++ +.+    +..|.||||+|+..++.+++++|++++ .+++.+ +.
T Consensus        25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdi-N~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~G-ADVN~~~~~  102 (300)
T PHA02884         25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADP-EAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYG-ADVNRYAEE  102 (300)
T ss_pred             hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCc-cccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcCcccCC
Confidence            456788887755 5666779999999999999998 554    468999999999999999999999985 457765 46


Q ss_pred             CCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCC
Q 037085           83 NGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQG  162 (248)
Q Consensus        83 ~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g  162 (248)
                      .|.||||+|+..++.+++++|+..|++      ++.+|..|.||||+|+..++..++..+.  |.        + .+..+
T Consensus       103 ~g~TpLh~Aa~~~~~eivklLL~~GAd------in~kd~~G~TpL~~A~~~~~~~~~~~~~--~~--------~-~~~~~  165 (300)
T PHA02884        103 AKITPLYISVLHGCLKCLEILLSYGAD------INIQTNDMVTPIELALMICNNFLAFMIC--DN--------E-ISNFY  165 (300)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHhCChhHHHHhc--CC--------c-ccccc
Confidence            799999999999999999999999998      8899999999999999999888876654  22        1 46677


Q ss_pred             CCHHHHHHHcCCCchHHHHHHHHHHhhhh
Q 037085          163 QTALQLCNANSQDSVFKEIGWIIQRAVAQ  191 (248)
Q Consensus       163 ~tpl~~a~~~~~~~~~~~i~~~L~~~g~~  191 (248)
                      .+|++++       ...+++++|++++..
T Consensus       166 ~~~~~~~-------~n~ei~~~Lish~vl  187 (300)
T PHA02884        166 KHPKKIL-------INFDILKILVSHFIL  187 (300)
T ss_pred             cChhhhh-------ccHHHHHHHHHHHHH
Confidence            8888875       357999999999994


No 50 
>PHA02730 ankyrin-like protein; Provisional
Probab=99.90  E-value=7.6e-23  Score=177.10  Aligned_cols=186  Identities=11%  Similarity=0.113  Sum_probs=147.4

Q ss_pred             CchhHhhhccCCCCHHHH--HHhCCCHHHHHHHHh--------------------------------cCcchhhh-----
Q 037085            5 WPQLASIKNQRGETTMHL--LSTDGDARMVRIFGE--------------------------------NNRELCLE-----   45 (248)
Q Consensus         5 ~~~~~~~~~~~g~t~L~~--A~~~g~~~~v~~Ll~--------------------------------~~~~~~~~-----   45 (248)
                      .+..++.+|..|+||||+  |+..|+.+++++|++                                .+.+. ..     
T Consensus       224 ~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~i~~~~~  302 (672)
T PHA02730        224 NNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDM-EIVNLLI  302 (672)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcch-HHHHHHh
Confidence            344567889999999995  666688999999999                                45544 22     


Q ss_pred             ---------------hcCCCCc---------------------HHHHHHHhC---CHHHHHHHHHhCchhhhhhccCCCc
Q 037085           46 ---------------VDNSLMI---------------------PLHRAALEG---DSDVIRALVSICPESLEKLTSNGET   86 (248)
Q Consensus        46 ---------------~~~~g~t---------------------~L~~A~~~g---~~~~~~~Ll~~~~~~~~~~~~~g~t   86 (248)
                                     .+..|.+                     .||.-...+   +.+++++|+++|. +++.. ..|.|
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GA-dIN~k-~~G~T  380 (672)
T PHA02730        303 EGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGA-TMDKT-TDNNY  380 (672)
T ss_pred             hccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCC-CCCcC-CCCCc
Confidence                           4556655                     566666655   6899999999954 56664 78999


Q ss_pred             HHHHHHHcCC----hHHHHHHHHHHhccccccccccccCCCCcHhHH---HHhCC---------cHHHHHHHHhhccccc
Q 037085           87 ALHLAVKKSR----SDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHL---ATLNK---------LKQIVELLIRENSNRR  150 (248)
Q Consensus        87 ~lh~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~---A~~~~---------~~~~v~~Ll~~g~~~~  150 (248)
                      |||+|+..++    .+++++|+++|++..    ++.+|..|.||||.   |...+         ..+++++|+.+|+   
T Consensus       381 pLH~Aa~~nnn~i~~eIvelLIs~Ga~~d----IN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GA---  453 (672)
T PHA02730        381 PLHDYFVNNNNIVDVNVVRFIVENNGHMA----INHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMD---  453 (672)
T ss_pred             HHHHHHHHcCCcchHHHHHHHHHcCCCcc----ccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhccc---
Confidence            9999988875    899999999987321    78899999999994   33232         2357999999998   


Q ss_pred             ccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccccc
Q 037085          151 IMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWN  207 (248)
Q Consensus       151 ~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~  207 (248)
                         |++.+|..|+||||+|+..    ++.+++++|+++|++++........++++.+
T Consensus       454 ---DINakD~~G~TPLh~Aa~~----~~~eive~LI~~GAdIN~~d~~~g~TaL~~A  503 (672)
T PHA02730        454 ---DIDMIDNENKTLLYYAVDV----NNIQFARRLLEYGASVNTTSRSIINTAIQKS  503 (672)
T ss_pred             ---chhccCCCCCCHHHHHHHh----CCHHHHHHHHHCCCCCCCCCCcCCcCHHHHH
Confidence               8999999999999999987    6789999999999999998875555577654


No 51 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.89  E-value=9.5e-23  Score=149.66  Aligned_cols=135  Identities=19%  Similarity=0.210  Sum_probs=110.9

Q ss_pred             hhHhhhccCCCCHHHHHHhCCCHHHHHHHHhc----CcchhhhhcCCCCcHHHHHHHhCCH---HHHHHHHHhCchhhhh
Q 037085            7 QLASIKNQRGETTMHLLSTDGDARMVRIFGEN----NRELCLEVDNSLMIPLHRAALEGDS---DVIRALVSICPESLEK   79 (248)
Q Consensus         7 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~----~~~~~~~~~~~g~t~L~~A~~~g~~---~~~~~Ll~~~~~~~~~   79 (248)
                      .+.+..|.+|.||||+|+..|+...+......    .......+|..|.||||+|+..|+.   +++++|++.+ .+++.
T Consensus         8 ~~~~~~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~g-adin~   86 (154)
T PHA02736          8 IFASEPDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWG-ADING   86 (154)
T ss_pred             hHHHhcCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcC-CCccc
Confidence            46778899999999999999984322211111    1223356789999999999999987   4688899885 45777


Q ss_pred             hc-cCCCcHHHHHHHcCChHHHHHHHHH-HhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhccc
Q 037085           80 LT-SNGETALHLAVKKSRSDAFQALVDE-AKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSN  148 (248)
Q Consensus        80 ~~-~~g~t~lh~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~  148 (248)
                      ++ ..|.||||+|+..++.+++++|+.+ +++      ++.+|..|.||||+|+..++.+++++|+++|++
T Consensus        87 ~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d------~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~  151 (154)
T PHA02736         87 KERVFGNTPLHIAVYTQNYELATWLCNQPGVN------MEILNYAFKTPYYVACERHDAKMMNILRAKGAQ  151 (154)
T ss_pred             cCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCC------CccccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            77 5899999999999999999999974 776      888999999999999999999999999999973


No 52 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.89  E-value=1.3e-22  Score=148.89  Aligned_cols=132  Identities=17%  Similarity=0.146  Sum_probs=110.2

Q ss_pred             hhhcCCCCcHHHHHHHhCCHHHHHHHHHhC------chhhhhhccCCCcHHHHHHHcCChH---HHHHHHHHHhcccccc
Q 037085           44 LEVDNSLMIPLHRAALEGDSDVIRALVSIC------PESLEKLTSNGETALHLAVKKSRSD---AFQALVDEAKSHRKEH  114 (248)
Q Consensus        44 ~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~------~~~~~~~~~~g~t~lh~a~~~~~~~---~~~~Ll~~~~~~~~~~  114 (248)
                      ...|..|.||||+|++.|+.  +.++....      +.....+|..|.||||+|+..++.+   ++++|++.|++     
T Consensus        11 ~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gad-----   83 (154)
T PHA02736         11 SEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGAD-----   83 (154)
T ss_pred             HhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCC-----
Confidence            55688899999999999984  23322211      1224567889999999999999864   68899999988     


Q ss_pred             cccccc-CCCCcHhHHHHhCCcHHHHHHHHhh-cccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhc
Q 037085          115 LFTWKD-KEGNTVLHLATLNKLKQIVELLIRE-NSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQ  192 (248)
Q Consensus       115 ~~~~~~-~~g~t~Lh~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~  192 (248)
                       ++.++ ..|+||||+|+..++.+++++|+.. |+      +++.+|..|+||||+|+..    +..+++++|+++|++.
T Consensus        84 -in~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~------d~n~~~~~g~tpL~~A~~~----~~~~i~~~Ll~~ga~~  152 (154)
T PHA02736         84 -INGKERVFGNTPLHIAVYTQNYELATWLCNQPGV------NMEILNYAFKTPYYVACER----HDAKMMNILRAKGAQC  152 (154)
T ss_pred             -ccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCC------CCccccCCCCCHHHHHHHc----CCHHHHHHHHHcCCCC
Confidence             88888 5999999999999999999999974 66      8999999999999999987    7889999999999876


Q ss_pred             C
Q 037085          193 S  193 (248)
Q Consensus       193 ~  193 (248)
                      .
T Consensus       153 ~  153 (154)
T PHA02736        153 K  153 (154)
T ss_pred             C
Confidence            4


No 53 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.88  E-value=7.1e-22  Score=140.18  Aligned_cols=142  Identities=24%  Similarity=0.252  Sum_probs=126.3

Q ss_pred             HHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChH
Q 037085           19 TMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSD   98 (248)
Q Consensus        19 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~   98 (248)
                      .+.+|+..+....|+.||+..++..+.+|.+|+||||.|+.+|+.++++.|+.. +...+.+...|+||||.|+.-++.+
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~-gAn~~a~T~~GWTPLhSAckWnN~~  144 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLS-GANKEAKTNEGWTPLHSACKWNNFE  144 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHc-cCCcccccccCccchhhhhcccchh
Confidence            457899999999999999999999999999999999999999999999999998 4558888999999999999999999


Q ss_pred             HHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHH-HHHHHHhhcccccccccccccCCCCCCHHHHHHHc
Q 037085           99 AFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQ-IVELLIRENSNRRIMIRINTVNKQGQTALQLCNAN  172 (248)
Q Consensus        99 ~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~-~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~  172 (248)
                      ++..|+++|++      ++...+...||||+|+-.++.. .+++|+....     ++.-.++..+.||+++|-.-
T Consensus       145 va~~LLqhgaD------VnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dry-----i~pg~~nn~eeta~~iARRT  208 (228)
T KOG0512|consen  145 VAGRLLQHGAD------VNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRY-----IHPGLKNNLEETAFDIARRT  208 (228)
T ss_pred             HHHHHHhccCc------ccccccccchhhHHhhcccchHHHHHHHhhccc-----cChhhhcCccchHHHHHHHh
Confidence            99999999999      9999999999999999877654 5666665443     57888899999999999543


No 54 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.86  E-value=1.7e-21  Score=176.08  Aligned_cols=171  Identities=16%  Similarity=0.164  Sum_probs=131.7

Q ss_pred             hhHhhhccCCCCHHH-HHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHh---CCHHHHHHHHHhCch-----hh
Q 037085            7 QLASIKNQRGETTMH-LLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALE---GDSDVIRALVSICPE-----SL   77 (248)
Q Consensus         7 ~~~~~~~~~g~t~L~-~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~---g~~~~~~~Ll~~~~~-----~~   77 (248)
                      ..++..|..|+|||| .|+..++.++++.|++.+.     .+..|.||||.|+..   +...++..+....+.     ..
T Consensus        43 ~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~  117 (743)
T TIGR00870        43 LNINCPDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELA  117 (743)
T ss_pred             cCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhh
Confidence            345667889999999 8888999999999999876     577899999999872   222333444433211     01


Q ss_pred             ----hhhccCCCcHHHHHHHcCChHHHHHHHHHHhcccccccccccc--------------CCCCcHhHHHHhCCcHHHH
Q 037085           78 ----EKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKD--------------KEGNTVLHLATLNKLKQIV  139 (248)
Q Consensus        78 ----~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~--------------~~g~t~Lh~A~~~~~~~~v  139 (248)
                          ......|.||||+|+..|+.+++++|+++|++      ++.++              ..|.||||.|+..++.+++
T Consensus       118 ~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAd------v~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv  191 (743)
T TIGR00870       118 NDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGAS------VPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIV  191 (743)
T ss_pred             ccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCC------CCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHH
Confidence                11234699999999999999999999999988      44322              3689999999999999999


Q ss_pred             HHHHhhcccccccccccccCCCCCCHHHHHHHcCC-----CchHHHHHHHHHHhhhhcCC
Q 037085          140 ELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQ-----DSVFKEIGWIIQRAVAQQSP  194 (248)
Q Consensus       140 ~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~-----~~~~~~i~~~L~~~g~~~~~  194 (248)
                      ++|++.|+      |++..|..|+||||+|+..+.     ......+.++++..++....
T Consensus       192 ~lLl~~ga------din~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~  245 (743)
T TIGR00870       192 ALLSEDPA------DILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRD  245 (743)
T ss_pred             HHHhcCCc------chhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCC
Confidence            99999998      899999999999999987641     11234577788888777643


No 55 
>PHA02792 ankyrin-like protein; Provisional
Probab=99.85  E-value=2.9e-20  Score=159.71  Aligned_cols=182  Identities=10%  Similarity=0.046  Sum_probs=148.2

Q ss_pred             hHhhhccCCCCHHHHHHhCC-------CHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhC--CHHHHHHHHHhCc---h
Q 037085            8 LASIKNQRGETTMHLLSTDG-------DARMVRIFGENNRELCLEVDNSLMIPLHRAALEG--DSDVIRALVSICP---E   75 (248)
Q Consensus         8 ~~~~~~~~g~t~L~~A~~~g-------~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g--~~~~~~~Ll~~~~---~   75 (248)
                      .++..+..|.||||+|+.++       +.++++.|+++|+++ ..+|..|.||||+|+.+.  ..|+++.|++..-   .
T Consensus       167 ~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~-~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~  245 (631)
T PHA02792        167 TTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEM-RYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNE  245 (631)
T ss_pred             ccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCc-CccCCCCChHHHHHHHcccchHHHHHHHHhccccccc
Confidence            34577888999999999999       899999999999998 778999999999999988  7888888876410   0


Q ss_pred             ------------------hhh--hh-------------------------------------------------------
Q 037085           76 ------------------SLE--KL-------------------------------------------------------   80 (248)
Q Consensus        76 ------------------~~~--~~-------------------------------------------------------   80 (248)
                                        .++  ..                                                       
T Consensus       246 ~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK  325 (631)
T PHA02792        246 LMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIK  325 (631)
T ss_pred             hHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHH
Confidence                              000  00                                                       


Q ss_pred             ----------ccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCC--CcHhHHHHhCCcH---HHHHHHHhh
Q 037085           81 ----------TSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEG--NTVLHLATLNKLK---QIVELLIRE  145 (248)
Q Consensus        81 ----------~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g--~t~Lh~A~~~~~~---~~v~~Ll~~  145 (248)
                                .....++++.|+..++.+++++|+++|++      ++.+|..|  .||||+|+.....   +++++|+++
T Consensus       326 ~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~GAD------IN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~  399 (631)
T PHA02792        326 CMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKNGNV------VVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPY  399 (631)
T ss_pred             HHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHcCCc------hhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhc
Confidence                      01134567888899999999999999998      88888775  6999998876654   468899999


Q ss_pred             cccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccccc
Q 037085          146 NSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWN  207 (248)
Q Consensus       146 g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~  207 (248)
                      |+      |+|.+|..|.||||+|+..    +..+++++|+++|++++.....+.+ +++.+
T Consensus       400 GA------DIN~kD~~G~TPLh~Aa~~----~n~eivelLLs~GADIN~kD~~G~T-pL~~A  450 (631)
T PHA02792        400 ID------DINKIDKHGRSILYYCIES----HSVSLVEWLIDNGADINITTKYGST-CIGIC  450 (631)
T ss_pred             CC------ccccccccCcchHHHHHHc----CCHHHHHHHHHCCCCCCCcCCCCCC-HHHHH
Confidence            98      8999999999999999987    7889999999999999988776655 66543


No 56 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.85  E-value=2.1e-21  Score=148.53  Aligned_cols=153  Identities=26%  Similarity=0.315  Sum_probs=130.4

Q ss_pred             HhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHH
Q 037085           24 STDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQAL  103 (248)
Q Consensus        24 ~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~L  103 (248)
                      |+.|+.-.|++-++.-...++.-|..|++|||+||+.|+..+++.|++. +..++..+....||||+|+..||.++++.|
T Consensus         8 cregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~r-garvn~tnmgddtplhlaaahghrdivqkl   86 (448)
T KOG0195|consen    8 CREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSR-GARVNSTNMGDDTPLHLAAAHGHRDIVQKL   86 (448)
T ss_pred             hhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhc-ccccccccCCCCcchhhhhhcccHHHHHHH
Confidence            4555555556556655555578899999999999999999999999998 456888888889999999999999999999


Q ss_pred             HHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHH
Q 037085          104 VDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGW  183 (248)
Q Consensus       104 l~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~  183 (248)
                      +++.++      +|..+..|+|||||||.-|.-.+++-|+..|+      .++..|+.|.||++.|...    ....+.+
T Consensus        87 l~~kad------vnavnehgntplhyacfwgydqiaedli~~ga------~v~icnk~g~tpldkakp~----l~~~l~e  150 (448)
T KOG0195|consen   87 LSRKAD------VNAVNEHGNTPLHYACFWGYDQIAEDLISCGA------AVNICNKKGMTPLDKAKPM----LKNTLLE  150 (448)
T ss_pred             HHHhcc------cchhhccCCCchhhhhhhcHHHHHHHHHhccc------eeeecccCCCCchhhhchH----HHHHHHH
Confidence            999888      99999999999999999999999999999998      8999999999999998543    3445556


Q ss_pred             HHHHhhhhcC
Q 037085          184 IIQRAVAQQS  193 (248)
Q Consensus       184 ~L~~~g~~~~  193 (248)
                      +-.++|-.++
T Consensus       151 ~aek~gq~~n  160 (448)
T KOG0195|consen  151 IAEKHGQSPN  160 (448)
T ss_pred             HHHHhCCCCC
Confidence            6667777766


No 57 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.84  E-value=1.9e-20  Score=153.95  Aligned_cols=174  Identities=21%  Similarity=0.269  Sum_probs=117.2

Q ss_pred             hhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHH
Q 037085           10 SIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALH   89 (248)
Q Consensus        10 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh   89 (248)
                      +..|.+|.|+||-+|...+.+||++|++.++.+ +..|..|+||||.|+.+|+..++++|++.+ ..+..++..|..|+.
T Consensus        67 ~~~n~DglTalhq~~id~~~e~v~~l~e~ga~V-n~~d~e~wtPlhaaascg~~~i~~~li~~g-A~~~avNsdg~~P~d  144 (527)
T KOG0505|consen   67 NLCNVDGLTALHQACIDDNLEMVKFLVENGANV-NAQDNEGWTPLHAAASCGYLNIVEYLIQHG-ANLLAVNSDGNMPYD  144 (527)
T ss_pred             cccCCccchhHHHHHhcccHHHHHHHHHhcCCc-cccccccCCcchhhcccccHHHHHHHHHhh-hhhhhccCCCCCccc
Confidence            445666666666666666666666666666666 566666666666666666666666666663 334444444444433


Q ss_pred             HHHHcCChHH--------------------------HHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHH
Q 037085           90 LAVKKSRSDA--------------------------FQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLI  143 (248)
Q Consensus        90 ~a~~~~~~~~--------------------------~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll  143 (248)
                      .+......++                          +...+..|      ...+..+..|.|.||.|+..|..++.++|+
T Consensus       145 l~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G------~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl  218 (527)
T KOG0505|consen  145 LAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAG------AELDARHARGATALHVAAANGYTEVAALLL  218 (527)
T ss_pred             cccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhcc------ccccccccccchHHHHHHhhhHHHHHHHHH
Confidence            3221111110                          11111122      225566666999999999999999999999


Q ss_pred             hhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCC
Q 037085          144 RENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGS  201 (248)
Q Consensus       144 ~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~  201 (248)
                      +.|.      +++.+|.+|+||||.|+..    +..+++++|..+|++.......+..
T Consensus       219 ~ag~------~~~~~D~dgWtPlHAAA~W----g~~~~~elL~~~ga~~d~~t~~g~~  266 (527)
T KOG0505|consen  219 QAGY------SVNIKDYDGWTPLHAAAHW----GQEDACELLVEHGADMDAKTKMGET  266 (527)
T ss_pred             Hhcc------CcccccccCCCcccHHHHh----hhHhHHHHHHHhhcccchhhhcCCC
Confidence            9986      8899999999999999877    7888999999999998776665554


No 58 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.84  E-value=1.2e-20  Score=155.12  Aligned_cols=153  Identities=24%  Similarity=0.313  Sum_probs=124.7

Q ss_pred             CchhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHH-------------------
Q 037085            5 WPQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDV-------------------   65 (248)
Q Consensus         5 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~-------------------   65 (248)
                      +...++..|.+|+||||-|+..|+..++++|+..++++ ...+.+|..|+..+......++                   
T Consensus        95 ~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~-~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~  173 (527)
T KOG0505|consen   95 NGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANL-LAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAE  173 (527)
T ss_pred             hcCCccccccccCCcchhhcccccHHHHHHHHHhhhhh-hhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhh
Confidence            44567888999999999999999999999999999988 6677777766543222111111                   


Q ss_pred             -------HHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHH
Q 037085           66 -------IRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQI  138 (248)
Q Consensus        66 -------~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~  138 (248)
                             ++..+.. +...+..+..|-|.||+|+..|..++.++|++.|.+      ++.+|.+|+||||.|+..|..++
T Consensus       174 e~~ml~D~~q~l~~-G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~------~~~~D~dgWtPlHAAA~Wg~~~~  246 (527)
T KOG0505|consen  174 EQTMLDDARQWLNA-GAELDARHARGATALHVAAANGYTEVAALLLQAGYS------VNIKDYDGWTPLHAAAHWGQEDA  246 (527)
T ss_pred             HHHHHHHHHHHHhc-cccccccccccchHHHHHHhhhHHHHHHHHHHhccC------cccccccCCCcccHHHHhhhHhH
Confidence                   1222222 333445555699999999999999999999999998      89999999999999999999999


Q ss_pred             HHHHHhhcccccccccccccCCCCCCHHHHHHH
Q 037085          139 VELLIRENSNRRIMIRINTVNKQGQTALQLCNA  171 (248)
Q Consensus       139 v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~  171 (248)
                      +++|+++|+      +.++....|.||+++|..
T Consensus       247 ~elL~~~ga------~~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  247 CELLVEHGA------DMDAKTKMGETPLDVADE  273 (527)
T ss_pred             HHHHHHhhc------ccchhhhcCCCCccchhh
Confidence            999999998      899999999999999965


No 59 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.83  E-value=9e-21  Score=161.21  Aligned_cols=184  Identities=18%  Similarity=0.210  Sum_probs=159.5

Q ss_pred             cCchhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccC
Q 037085            4 LWPQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSN   83 (248)
Q Consensus         4 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~   83 (248)
                      .+++-.+..|.+|.|+||.||.+|+.+++++|++..+-+ +..+.+|.+|||+|+..|+.++++.++.+. +..+.....
T Consensus        37 trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~l-dl~d~kg~~plhlaaw~g~~e~vkmll~q~-d~~na~~~e  114 (854)
T KOG0507|consen   37 TRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALL-DLCDTKGILPLHLAAWNGNLEIVKMLLLQT-DILNAVNIE  114 (854)
T ss_pred             CCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhh-hhhhccCcceEEehhhcCcchHHHHHHhcc-cCCCccccc
Confidence            456677889999999999999999999999999998877 677899999999999999999999999985 778889999


Q ss_pred             CCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccc--cccccccccCCC
Q 037085           84 GETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNR--RIMIRINTVNKQ  161 (248)
Q Consensus        84 g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~--~~~~~~~~~~~~  161 (248)
                      |.||||.|+..+|.+++.+|+.++++      ...+|+.+.|+|-+|++.|..+++..|++..-..  ...+.-..++-.
T Consensus       115 ~~tplhlaaqhgh~dvv~~Ll~~~ad------p~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~  188 (854)
T KOG0507|consen  115 NETPLHLAAQHGHLEVVFYLLKKNAD------PFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFP  188 (854)
T ss_pred             CcCccchhhhhcchHHHHHHHhcCCC------ccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCC
Confidence            99999999999999999999999998      6789999999999999999999999999862110  000111234556


Q ss_pred             CCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCC
Q 037085          162 GQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDA  199 (248)
Q Consensus       162 g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~  199 (248)
                      +.+|+|+|.++    ++.++++.|+.+|.+++....++
T Consensus       189 ~~~plHlaakn----gh~~~~~~ll~ag~din~~t~~g  222 (854)
T KOG0507|consen  189 AIYPLHLAAKN----GHVECMQALLEAGFDINYTTEDG  222 (854)
T ss_pred             CcCCcchhhhc----chHHHHHHHHhcCCCcccccccc
Confidence            78999999988    89999999999999998876554


No 60 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.82  E-value=7.5e-20  Score=165.43  Aligned_cols=178  Identities=17%  Similarity=0.108  Sum_probs=136.5

Q ss_pred             cCCCCHHHHHHhCCCHHHHHHHHhc--CcchhhhhcCCCCcHHH-HHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHH
Q 037085           14 QRGETTMHLLSTDGDARMVRIFGEN--NRELCLEVDNSLMIPLH-RAALEGDSDVIRALVSICPESLEKLTSNGETALHL   90 (248)
Q Consensus        14 ~~g~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~g~t~L~-~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~   90 (248)
                      ..++..|+.|+..|+.+.++.+++.  +.++ +..|..|.|||| .|+.+++.++++.|++.+.     .+..|.||||.
T Consensus        15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~i-n~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G~T~Lh~   88 (743)
T TIGR00870        15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNI-NCPDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVGDTLLHA   88 (743)
T ss_pred             CHHHHHHHHHHHcCCHHHHHHHhccccccCC-CCcCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcChHHHHH
Confidence            3568899999999999999999998  6666 678899999999 8889999999999998753     56789999999


Q ss_pred             HHHcCChHHHHHHHHHHhccccc--------cccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccC---
Q 037085           91 AVKKSRSDAFQALVDEAKSHRKE--------HLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVN---  159 (248)
Q Consensus        91 a~~~~~~~~~~~Ll~~~~~~~~~--------~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~---  159 (248)
                      |+. +..+.++.++.........        ......+..|.||||+|+..++.+++++|+++|+      +++.++   
T Consensus        89 A~~-~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GA------dv~~~~~~~  161 (743)
T TIGR00870        89 ISL-EYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGA------SVPARACGD  161 (743)
T ss_pred             HHh-ccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCC------CCCcCcCCc
Confidence            987 3333333333332211000        0011233579999999999999999999999998      555442   


Q ss_pred             -----------CCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccccccc
Q 037085          160 -----------KQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQT  209 (248)
Q Consensus       160 -----------~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~~  209 (248)
                                 ..|.|||+.|+..    ++.+++++|++.|++++.++..+.+ +++.+..
T Consensus       162 ~~~~~~~~~~~~~g~tpL~~Aa~~----~~~~iv~lLl~~gadin~~d~~g~T-~Lh~A~~  217 (743)
T TIGR00870       162 FFVKSQGVDSFYHGESPLNAAACL----GSPSIVALLSEDPADILTADSLGNT-LLHLLVM  217 (743)
T ss_pred             hhhcCCCCCcccccccHHHHHHHh----CCHHHHHHHhcCCcchhhHhhhhhH-HHHHHHh
Confidence                       3589999999987    7899999999999998887765544 6665543


No 61 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.82  E-value=1.5e-19  Score=144.34  Aligned_cols=126  Identities=16%  Similarity=0.155  Sum_probs=106.5

Q ss_pred             hhhcCCCCcH-HHHHHHhCCHHHHHHHHHhCchhhhhh----ccCCCcHHHHHHHcCChHHHHHHHHHHhcccccccccc
Q 037085           44 LEVDNSLMIP-LHRAALEGDSDVIRALVSICPESLEKL----TSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTW  118 (248)
Q Consensus        44 ~~~~~~g~t~-L~~A~~~g~~~~~~~Ll~~~~~~~~~~----~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~  118 (248)
                      ..+|..|.|+ ||.|+..|+.+++++|++.|. +++.+    +..|.||||+|+..++.+++++|+++|++      ++.
T Consensus        26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GA-diN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GAD------VN~   98 (300)
T PHA02884         26 KKKNKICIANILYSSIKFHYTDIIDAILKLGA-DPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGAD------VNR   98 (300)
T ss_pred             hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCC-CccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------cCc
Confidence            4456777765 566778899999999999965 46665    46899999999999999999999999998      887


Q ss_pred             c-cCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHH
Q 037085          119 K-DKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQ  186 (248)
Q Consensus       119 ~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~  186 (248)
                      + +..|.||||+|+..++.+++++|+..|+      +++.+|..|.||||+|+..    ...+++.++.
T Consensus        99 ~~~~~g~TpLh~Aa~~~~~eivklLL~~GA------din~kd~~G~TpL~~A~~~----~~~~~~~~~~  157 (300)
T PHA02884         99 YAEEAKITPLYISVLHGCLKCLEILLSYGA------DINIQTNDMVTPIELALMI----CNNFLAFMIC  157 (300)
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHCCC------CCCCCCCCCCCHHHHHHHh----CChhHHHHhc
Confidence            5 4689999999999999999999999998      8999999999999999876    3445554443


No 62 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.81  E-value=1.3e-19  Score=128.78  Aligned_cols=119  Identities=21%  Similarity=0.156  Sum_probs=108.6

Q ss_pred             HHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhC
Q 037085           54 LHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLN  133 (248)
Q Consensus        54 L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~  133 (248)
                      +-+|+..+..+.|+.||+..+..++.+|.+|.||||-|+.+|+.+|++.|+..|++      .+.+...|+||||.||.-
T Consensus        67 ~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn------~~a~T~~GWTPLhSAckW  140 (228)
T KOG0512|consen   67 LLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGAN------KEAKTNEGWTPLHSACKW  140 (228)
T ss_pred             HHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCC------cccccccCccchhhhhcc
Confidence            56899999999999999998999999999999999999999999999999999999      889999999999999999


Q ss_pred             CcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHH
Q 037085          134 KLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQR  187 (248)
Q Consensus       134 ~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~  187 (248)
                      .+.+++.+|+++|+      |+|+..+...||||+|+.+.   .....+++|+.
T Consensus       141 nN~~va~~LLqhga------DVnA~t~g~ltpLhlaa~~r---n~r~t~~~Ll~  185 (228)
T KOG0512|consen  141 NNFEVAGRLLQHGA------DVNAQTKGLLTPLHLAAGNR---NSRDTLELLLH  185 (228)
T ss_pred             cchhHHHHHHhccC------cccccccccchhhHHhhccc---chHHHHHHHhh
Confidence            99999999999998      99999999999999999774   33445555553


No 63 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.81  E-value=3.2e-19  Score=153.33  Aligned_cols=165  Identities=22%  Similarity=0.270  Sum_probs=139.3

Q ss_pred             HhhhccCCCCHHHHHHhC---CCHHHHHHHHhcCcchhhh----hcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhh-
Q 037085            9 ASIKNQRGETTMHLLSTD---GDARMVRIFGENNRELCLE----VDNSLMIPLHRAALEGDSDVIRALVSICPESLEKL-   80 (248)
Q Consensus         9 ~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~----~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~-   80 (248)
                      .+.+..-|+|+||.|..+   ++.++++.|++..+...+.    -...|+||||+|+.+.+.++|++|++.+++ ++++ 
T Consensus       136 ~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gAD-V~aRa  214 (782)
T KOG3676|consen  136 LNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGAD-VHARA  214 (782)
T ss_pred             cccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCc-hhhHh
Confidence            344566799999999974   5569999999988765432    244799999999999999999999998554 4332 


Q ss_pred             --------cc--------------CCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHH
Q 037085           81 --------TS--------------NGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQI  138 (248)
Q Consensus        81 --------~~--------------~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~  138 (248)
                              |.              .|+.||.+|+..++++++++|+++|++      ++.+|..|+|.||..+..-..++
T Consensus       215 ~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd------~~aqDS~GNTVLH~lVi~~~~~M  288 (782)
T KOG3676|consen  215 CGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGAD------PNAQDSNGNTVLHMLVIHFVTEM  288 (782)
T ss_pred             hccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCC------CCccccCCChHHHHHHHHHHHHH
Confidence                    11              378899999999999999999999999      99999999999999999999999


Q ss_pred             HHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHh
Q 037085          139 VELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRA  188 (248)
Q Consensus       139 v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~  188 (248)
                      ...++++|+++    ....+|+.|.|||.+|++.    +..+|.+.+++.
T Consensus       289 y~~~L~~ga~~----l~~v~N~qgLTPLtLAakl----Gk~emf~~ile~  330 (782)
T KOG3676|consen  289 YDLALELGANA----LEHVRNNQGLTPLTLAAKL----GKKEMFQHILER  330 (782)
T ss_pred             HHHHHhcCCCc----cccccccCCCChHHHHHHh----hhHHHHHHHHHh
Confidence            99999999841    3778999999999999988    677777777776


No 64 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.81  E-value=1.1e-19  Score=142.98  Aligned_cols=186  Identities=19%  Similarity=0.155  Sum_probs=143.2

Q ss_pred             CHHHHHHHHhcCc--------chhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHc-----
Q 037085           28 DARMVRIFGENNR--------ELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKK-----   94 (248)
Q Consensus        28 ~~~~v~~Ll~~~~--------~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~-----   94 (248)
                      +.+.|+..+....        .+.+.-|.+|.|+|||++.+++.++|+.||+.+-++++..++-|+||+++++..     
T Consensus       238 ~pe~V~~~l~~f~als~~lL~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~  317 (452)
T KOG0514|consen  238 DPEQVEDYLAYFEALSPPLLEYVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQP  317 (452)
T ss_pred             CHHHHHHHHHHHHhcChHHHHHHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcch
Confidence            5566665554322        223667999999999999999999999999999899999999999999998754     


Q ss_pred             CChHHHHHHHHHHhcccccccccccc-CCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcC
Q 037085           95 SRSDAFQALVDEAKSHRKEHLFTWKD-KEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANS  173 (248)
Q Consensus        95 ~~~~~~~~Ll~~~~~~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~  173 (248)
                      .+.++|+.|+..|.       +|.+- .-|+|+|++|+.+|+.++|+.||..|+      |+|..|.+|-|+|++|++. 
T Consensus       318 ~d~~vV~~LF~mgn-------VNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgA------dVNiQDdDGSTALMCA~EH-  383 (452)
T KOG0514|consen  318 ADRTVVERLFKMGD-------VNAKASQHGQTALMLAVSHGRVDMVKALLACGA------DVNIQDDDGSTALMCAAEH-  383 (452)
T ss_pred             hhHHHHHHHHhccC-------cchhhhhhcchhhhhhhhcCcHHHHHHHHHccC------CCccccCCccHHHhhhhhh-
Confidence            45778999988753       55544 679999999999999999999999998      9999999999999999998 


Q ss_pred             CCchHHHHHHHHHHh-hhhcCCCCCCCCCccccccccCCchhhhhhHHHHHHHHHHHHHHhhcCC
Q 037085          174 QDSVFKEIGWIIQRA-VAQQSPQLPDAGSANVSWNQTRWPIETRNVLLMVVVTIAAAFFTVTCNL  237 (248)
Q Consensus       174 ~~~~~~~i~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~f~~~~~~  237 (248)
                         ++++|+++|+.. +.+..-.+.|+.+ .+..+   |...+++   +...|.+...|..++.+
T Consensus       384 ---GhkEivklLLA~p~cd~sLtD~DgST-Al~IA---leagh~e---Ia~mlYa~~n~~~s~~p  438 (452)
T KOG0514|consen  384 ---GHKEIVKLLLAVPSCDISLTDVDGST-ALSIA---LEAGHRE---IAVMLYAHMNIKRSKLP  438 (452)
T ss_pred             ---ChHHHHHHHhccCcccceeecCCCch-hhhhH---HhcCchH---HHHHHHHHHHhhhhcCC
Confidence               899999999953 4444444444444 44333   2233333   33445566777776654


No 65 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.80  E-value=1.1e-19  Score=154.70  Aligned_cols=187  Identities=20%  Similarity=0.161  Sum_probs=157.1

Q ss_pred             cccCchhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhc
Q 037085            2 ARLWPQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLT   81 (248)
Q Consensus         2 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~   81 (248)
                      |.....+....+..|.+|||+|+..|+.++++.++.++... +.....|.||||.|++.|+.+++.+|++++. +.-.++
T Consensus        68 lle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~-na~~~e~~tplhlaaqhgh~dvv~~Ll~~~a-dp~i~n  145 (854)
T KOG0507|consen   68 LLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDIL-NAVNIENETPLHLAAQHGHLEVVFYLLKKNA-DPFIRN  145 (854)
T ss_pred             HhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCC-CcccccCcCccchhhhhcchHHHHHHHhcCC-CccccC
Confidence            33445567778899999999999999999999999999554 8889999999999999999999999999854 466788


Q ss_pred             cCCCcHHHHHHHcCChHHHHHHHHHHhcccc--ccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccC
Q 037085           82 SNGETALHLAVKKSRSDAFQALVDEAKSHRK--EHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVN  159 (248)
Q Consensus        82 ~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~--~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~  159 (248)
                      ..+.|+|-+|++.|..++++.|+...-....  ......++-.+.+|||+|+.+|+.++++.|++.|.      |+|...
T Consensus       146 ns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~------din~~t  219 (854)
T KOG0507|consen  146 NSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGF------DINYTT  219 (854)
T ss_pred             cccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCC------Cccccc
Confidence            9999999999999999999999987222111  00123455667799999999999999999999996      888888


Q ss_pred             CCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCC
Q 037085          160 KQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGS  201 (248)
Q Consensus       160 ~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~  201 (248)
                      ..| |+||.|+.+    +..+++.+|++.|.........++.
T Consensus       220 ~~g-talheaalc----gk~evvr~ll~~gin~h~~n~~~qt  256 (854)
T KOG0507|consen  220 EDG-TALHEAALC----GKAEVVRFLLEIGINTHIKNQHGQT  256 (854)
T ss_pred             ccc-hhhhhHhhc----CcchhhhHHHhhccccccccccchH
Confidence            877 999999988    7899999999999988776655544


No 66 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.79  E-value=3.7e-19  Score=136.29  Aligned_cols=135  Identities=19%  Similarity=0.270  Sum_probs=116.7

Q ss_pred             chhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCC
Q 037085            6 PQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGE   85 (248)
Q Consensus         6 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~   85 (248)
                      ....+..|..|.+|||+||+.|+..+++.|+.+|+.+ +..+....||||+|+.+||.++++.|++. ..+++.++..|.
T Consensus        24 ehdln~gddhgfsplhwaakegh~aivemll~rgarv-n~tnmgddtplhlaaahghrdivqkll~~-kadvnavnehgn  101 (448)
T KOG0195|consen   24 EHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARV-NSTNMGDDTPLHLAAAHGHRDIVQKLLSR-KADVNAVNEHGN  101 (448)
T ss_pred             ccccccccccCcchhhhhhhcccHHHHHHHHhccccc-ccccCCCCcchhhhhhcccHHHHHHHHHH-hcccchhhccCC
Confidence            4456788999999999999999999999999999998 78888889999999999999999999998 556999999999


Q ss_pred             cHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhccc
Q 037085           86 TALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSN  148 (248)
Q Consensus        86 t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~  148 (248)
                      ||||+||.-|...+++-|+.+|+.      ++.-+++|.|||..|-..-...+.+.--++|.+
T Consensus       102 tplhyacfwgydqiaedli~~ga~------v~icnk~g~tpldkakp~l~~~l~e~aek~gq~  158 (448)
T KOG0195|consen  102 TPLHYACFWGYDQIAEDLISCGAA------VNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQS  158 (448)
T ss_pred             CchhhhhhhcHHHHHHHHHhccce------eeecccCCCCchhhhchHHHHHHHHHHHHhCCC
Confidence            999999999999999999999988      899999999999988543333333333345554


No 67 
>PHA02792 ankyrin-like protein; Provisional
Probab=99.78  E-value=5.4e-18  Score=145.82  Aligned_cols=161  Identities=14%  Similarity=0.139  Sum_probs=132.1

Q ss_pred             CCHHHHHHhCC--CHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCC--CcHHHHHH
Q 037085           17 ETTMHLLSTDG--DARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNG--ETALHLAV   92 (248)
Q Consensus        17 ~t~L~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g--~t~lh~a~   92 (248)
                      +-.||.-..++  +.+++++|++.|.+..   ......+++.|+..|+.+++++|+++| .+++.+|..|  .||||+|.
T Consensus       307 q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~---r~~~~n~~~~Aa~~gn~eIVelLIs~G-ADIN~kD~~g~~~TpLh~A~  382 (631)
T PHA02792        307 QDLLSEYVSYHTVYINVIKCMIDEGATLY---RFKHINKYFQKFDNRDPKVVEYILKNG-NVVVEDDDNIINIMPLFPTL  382 (631)
T ss_pred             HHHHHHHHhcCCccHHHHHHHHHCCCccc---cCCcchHHHHHHHcCCHHHHHHHHHcC-CchhhhcCCCCChhHHHHHH
Confidence            34567777776  7799999999999862   223566799999999999999999995 4577777764  69999987


Q ss_pred             HcCCh---HHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHH
Q 037085           93 KKSRS---DAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLC  169 (248)
Q Consensus        93 ~~~~~---~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a  169 (248)
                      .....   +++++|+++|++      ++.+|..|.||||+|+..++.+++++|+++|+      +++.+|..|+|||++|
T Consensus       383 ~n~~~~v~~IlklLIs~GAD------IN~kD~~G~TPLh~Aa~~~n~eivelLLs~GA------DIN~kD~~G~TpL~~A  450 (631)
T PHA02792        383 SIHESDVLSILKLCKPYIDD------INKIDKHGRSILYYCIESHSVSLVEWLIDNGA------DINITTKYGSTCIGIC  450 (631)
T ss_pred             HhccHhHHHHHHHHHhcCCc------cccccccCcchHHHHHHcCCHHHHHHHHHCCC------CCCCcCCCCCCHHHHH
Confidence            76654   467888999988      89999999999999999999999999999998      8999999999999999


Q ss_pred             HHcCC------CchHHHHHHHHHHhhhhcC
Q 037085          170 NANSQ------DSVFKEIGWIIQRAVAQQS  193 (248)
Q Consensus       170 ~~~~~------~~~~~~i~~~L~~~g~~~~  193 (248)
                      +....      .....++++.|+++|+++.
T Consensus       451 ~~~~~~~~~~i~~~~~~il~lLLs~~p~i~  480 (631)
T PHA02792        451 VILAHACIPEIAELYIKILEIILSKLPTIE  480 (631)
T ss_pred             HHHHhcccHHHHHHHHHHHHHHHhcCCChh
Confidence            76211      1235678999999886654


No 68 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.78  E-value=3.8e-18  Score=120.17  Aligned_cols=125  Identities=30%  Similarity=0.501  Sum_probs=112.5

Q ss_pred             hhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHH
Q 037085           11 IKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHL   90 (248)
Q Consensus        11 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~   90 (248)
                      ..|.+|.||||+|+..++.++++.|++.+... ...+..|.||||.|+..++.++++.|++.+. ..+..+..+.||+|+
T Consensus         2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~-~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~~~l~~   79 (126)
T cd00204           2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADV-NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGA-DVNARDKDGNTPLHL   79 (126)
T ss_pred             CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CccccCCCCCCHHHH
Confidence            35678999999999999999999999999887 6788899999999999999999999999854 466777889999999


Q ss_pred             HHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHH
Q 037085           91 AVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLI  143 (248)
Q Consensus        91 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll  143 (248)
                      |+..++.+++++|+.++..      .+..+..+.||+++|...++.+++++|+
T Consensus        80 a~~~~~~~~~~~L~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          80 AARNGNLDVVKLLLKHGAD------VNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HHHcCcHHHHHHHHHcCCC------CcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            9999999999999998766      7778899999999999999999998874


No 69 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.78  E-value=2.3e-18  Score=114.45  Aligned_cols=83  Identities=31%  Similarity=0.492  Sum_probs=60.7

Q ss_pred             HHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhC
Q 037085           54 LHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLN  133 (248)
Q Consensus        54 L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~  133 (248)
                      ||+|++.|+.++++.|++.+. ..+.    |.||||+|+..|+.+++++|+++|++      ++.+|..|+||||+|+..
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~-~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~   69 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGA-DINL----GNTALHYAAENGNLEIVKLLLENGAD------INSQDKNGNTALHYAAEN   69 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTS-TTTS----SSBHHHHHHHTTTHHHHHHHHHTTTC------TT-BSTTSSBHHHHHHHT
T ss_pred             CHHHHHcCCHHHHHHHHHCcC-CCCC----CCCHHHHHHHcCCHHHHHHHHHhccc------ccccCCCCCCHHHHHHHc
Confidence            577777777777777777542 2322    67777777777777777777777776      677777788888888888


Q ss_pred             CcHHHHHHHHhhcc
Q 037085          134 KLKQIVELLIRENS  147 (248)
Q Consensus       134 ~~~~~v~~Ll~~g~  147 (248)
                      ++.+++++|+++|+
T Consensus        70 ~~~~~~~~Ll~~g~   83 (89)
T PF12796_consen   70 GNLEIVKLLLEHGA   83 (89)
T ss_dssp             THHHHHHHHHHTTT
T ss_pred             CCHHHHHHHHHcCC
Confidence            88888888887776


No 70 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.76  E-value=1.3e-17  Score=117.40  Aligned_cols=123  Identities=31%  Similarity=0.473  Sum_probs=110.2

Q ss_pred             hcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCc
Q 037085           46 VDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNT  125 (248)
Q Consensus        46 ~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t  125 (248)
                      ++.+|.||||+|+..++.++++.|++.+.. .+..+..|.+|+|.|+..+..+++++|+..+..      ++..+..|.|
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~-~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~------~~~~~~~~~~   75 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGAD-VNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGAD------VNARDKDGNT   75 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------ccccCCCCCC
Confidence            467899999999999999999999998544 477888999999999999999999999999875      7778899999


Q ss_pred             HhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHH
Q 037085          126 VLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWII  185 (248)
Q Consensus       126 ~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L  185 (248)
                      |+|+|+..++.+++++|++.+.      +.+..+..|.||+++|...    ...+++++|
T Consensus        76 ~l~~a~~~~~~~~~~~L~~~~~------~~~~~~~~~~~~l~~~~~~----~~~~~~~~L  125 (126)
T cd00204          76 PLHLAARNGNLDVVKLLLKHGA------DVNARDKDGRTPLHLAAKN----GHLEVVKLL  125 (126)
T ss_pred             HHHHHHHcCcHHHHHHHHHcCC------CCcccCCCCCCHHHHHHhc----CCHHHHHHh
Confidence            9999999999999999999885      7888999999999999877    566777766


No 71 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.75  E-value=6.8e-18  Score=112.17  Aligned_cols=84  Identities=20%  Similarity=0.389  Sum_probs=76.1

Q ss_pred             HHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHH
Q 037085           20 MHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDA   99 (248)
Q Consensus        20 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~   99 (248)
                      ||+|++.|+.++++.|++.+.++ +.    |.||||+|+..|+.+++++|++.+ .+++.+|..|+||||+|+..++.++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~-~~----~~~~l~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~   74 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADI-NL----GNTALHYAAENGNLEIVKLLLENG-ADINSQDKNGNTALHYAAENGNLEI   74 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTT-TS----SSBHHHHHHHTTTHHHHHHHHHTT-TCTT-BSTTSSBHHHHHHHTTHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCC-CC----CCCHHHHHHHcCCHHHHHHHHHhc-ccccccCCCCCCHHHHHHHcCCHHH
Confidence            79999999999999999988776 22    899999999999999999999985 5688889999999999999999999


Q ss_pred             HHHHHHHHhc
Q 037085          100 FQALVDEAKS  109 (248)
Q Consensus       100 ~~~Ll~~~~~  109 (248)
                      +++|+++|++
T Consensus        75 ~~~Ll~~g~~   84 (89)
T PF12796_consen   75 VKLLLEHGAD   84 (89)
T ss_dssp             HHHHHHTTT-
T ss_pred             HHHHHHcCCC
Confidence            9999999887


No 72 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.70  E-value=1.9e-16  Score=100.96  Aligned_cols=103  Identities=19%  Similarity=0.250  Sum_probs=89.7

Q ss_pred             HHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHh
Q 037085           53 PLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATL  132 (248)
Q Consensus        53 ~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~  132 (248)
                      -+.+++++|..+-|+..+..+ ..++.. -.|++|||+|+..|+.+++++|+..|++      ++.+|++|-|||-.|++
T Consensus         5 ~~~W~vkNG~~DeVk~~v~~g-~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~------i~~kDKygITPLLsAvw   76 (117)
T KOG4214|consen    5 SVAWNVKNGEIDEVKQSVNEG-LNVNEI-YGGRTPLHYAADYGQLSILEFLISIGAN------IQDKDKYGITPLLSAVW   76 (117)
T ss_pred             hHhhhhccCcHHHHHHHHHcc-ccHHHH-hCCcccchHhhhcchHHHHHHHHHhccc------cCCccccCCcHHHHHHH
Confidence            467889999999999999885 444443 3899999999999999999999999999      99999999999999999


Q ss_pred             CCcHHHHHHHHhhcccccccccccccCCCCCCHHHHH
Q 037085          133 NKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLC  169 (248)
Q Consensus       133 ~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a  169 (248)
                      .|+.++|++|++.|+      |...+-.+|.+.+..+
T Consensus        77 EGH~~cVklLL~~GA------drt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   77 EGHRDCVKLLLQNGA------DRTIHAPDGTALIEAT  107 (117)
T ss_pred             HhhHHHHHHHHHcCc------ccceeCCCchhHHhhc
Confidence            999999999999998      6777888887777654


No 73 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.68  E-value=1.5e-16  Score=140.57  Aligned_cols=178  Identities=18%  Similarity=0.238  Sum_probs=160.6

Q ss_pred             hhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHH
Q 037085           11 IKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHL   90 (248)
Q Consensus        11 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~   90 (248)
                      ....+-.|+|..||..|+.+.+++|+.+|+++ ..+|..|++||.+|+-.||..+|+.|+....+...+.|+.+.|+|.+
T Consensus       752 ~Te~n~~t~LT~acaggh~e~vellv~rgani-ehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSl  830 (2131)
T KOG4369|consen  752 LTEPNIKTNLTSACAGGHREEVELLVVRGANI-EHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSL  830 (2131)
T ss_pred             ccCccccccccccccCccHHHHHHHHHhcccc-cccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEE
Confidence            33455689999999999999999999999998 88999999999999999999999999998777677889999999999


Q ss_pred             HHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhccccccccccccc--CCCCCCHHHH
Q 037085           91 AVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTV--NKQGQTALQL  168 (248)
Q Consensus        91 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~--~~~g~tpl~~  168 (248)
                      |+..|+.+++++|+..|++      -..++....|||.+|...|..+++..|+..|+      .+|.+  .+.|..||++
T Consensus       831 acsggr~~vvelLl~~gan------kehrnvsDytPlsla~Sggy~~iI~~llS~Gs------eInSrtgSklgisPLml  898 (2131)
T KOG4369|consen  831 ACSGGRTRVVELLLNAGAN------KEHRNVSDYTPLSLARSGGYTKIIHALLSSGS------EINSRTGSKLGISPLML  898 (2131)
T ss_pred             ecCCCcchHHHHHHHhhcc------ccccchhhcCchhhhcCcchHHHHHHHhhccc------ccccccccccCcchhhh
Confidence            9999999999999999988      67788889999999999999999999999998      45555  5678999999


Q ss_pred             HHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccc
Q 037085          169 CNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVS  205 (248)
Q Consensus       169 a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~  205 (248)
                      |..+    ++.+..+.|++.|-+++.+...+..+.+-
T Consensus       899 atmn----gh~~at~~ll~~gsdiNaqIeTNrnTalt  931 (2131)
T KOG4369|consen  899 ATMN----GHQAATLSLLQPGSDINAQIETNRNTALT  931 (2131)
T ss_pred             hhhc----cccHHHHHHhcccchhcccccccccccee
Confidence            9988    78899999999999999999887766543


No 74 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.66  E-value=1.1e-15  Score=131.85  Aligned_cols=184  Identities=17%  Similarity=0.216  Sum_probs=142.6

Q ss_pred             cccCchhHhhh----ccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhh---------c--------------CCCCcHH
Q 037085            2 ARLWPQLASIK----NQRGETTMHLLSTDGDARMVRIFGENNRELCLEV---------D--------------NSLMIPL   54 (248)
Q Consensus         2 l~~~~~~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~---------~--------------~~g~t~L   54 (248)
                      |+..|.+++..    ...|+|+||+|+.+.+.++|++|++.|+++. .+         |              ..|+.||
T Consensus       166 L~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~-aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPL  244 (782)
T KOG3676|consen  166 LEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVH-ARACGAFFCPDDQKASRKSTNYTGYFYFGEYPL  244 (782)
T ss_pred             HHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchh-hHhhccccCcccccccccccCCcceeeeccCch
Confidence            44556666643    4569999999999999999999999999873 22         1              1378999


Q ss_pred             HHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCC
Q 037085           55 HRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNK  134 (248)
Q Consensus        55 ~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~  134 (248)
                      -.|+-.++.|++++|+++ +.+++.+|..|+|.||..+..-..++..+++++|++    .+...+|..|-|||.+|+..|
T Consensus       245 SfAAC~nq~eivrlLl~~-gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~----~l~~v~N~qgLTPLtLAaklG  319 (782)
T KOG3676|consen  245 SFAACTNQPEIVRLLLAH-GADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN----ALEHVRNNQGLTPLTLAAKLG  319 (782)
T ss_pred             HHHHHcCCHHHHHHHHhc-CCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCC----ccccccccCCCChHHHHHHhh
Confidence            999999999999999997 567999999999999999999889999999999887    346779999999999999999


Q ss_pred             cHHHHHHHHhh-cc-------cccccccccccCCC--CCCHHHHHHHcCCCchHH----HHHHHHHHhhhhc
Q 037085          135 LKQIVELLIRE-NS-------NRRIMIRINTVNKQ--GQTALQLCNANSQDSVFK----EIGWIIQRAVAQQ  192 (248)
Q Consensus       135 ~~~~v~~Ll~~-g~-------~~~~~~~~~~~~~~--g~tpl~~a~~~~~~~~~~----~i~~~L~~~g~~~  192 (248)
                      ..++.+.+++. ..       --.-.+|++..|..  ..+.|.+.+.. ....+.    ++++.|++..++.
T Consensus       320 k~emf~~ile~~k~~~W~YGpvtsslYpL~~iDT~~n~~SvLeivvyg-~~~eHl~Ll~~~i~~LL~~KW~~  390 (782)
T KOG3676|consen  320 KKEMFQHILERRKFTDWAYGPVTSSLYPLNSIDTIGNENSVLEIVVYG-IKNEHLELLDGPIEELLEDKWKA  390 (782)
T ss_pred             hHHHHHHHHHhhcccceeecccccccccchhcccccchhhhhhhhhcC-CcHHHHHHHhHHHHHHHHHHHHH
Confidence            99999999998 22       11112456666654  34566666554 333333    4556666655554


No 75 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.66  E-value=1.1e-15  Score=118.56  Aligned_cols=129  Identities=23%  Similarity=0.357  Sum_probs=115.6

Q ss_pred             hhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCC-----HHHHHHHHHhCc--hhhhhhccC
Q 037085           11 IKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGD-----SDVIRALVSICP--ESLEKLTSN   83 (248)
Q Consensus        11 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~-----~~~~~~Ll~~~~--~~~~~~~~~   83 (248)
                      ..+..+.+++|.++..+..+++++++..+.++ +.++..|.||||+|+..++     .+++++|++.+.  ...+..+..
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~  146 (235)
T COG0666          68 ARDLDGRLPLHSAASKGDDKIVKLLLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDED  146 (235)
T ss_pred             cCCccccCHHHHHHHcCcHHHHHHHHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCC
Confidence            34455889999999999999999999999998 8899999999999999999     999999999877  567777999


Q ss_pred             CCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhc
Q 037085           84 GETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIREN  146 (248)
Q Consensus        84 g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g  146 (248)
                      |.||||+|+..|+.+++++|++.+++      ++.++..|.|+++.|+..++.++++.+++.+
T Consensus       147 g~tpl~~A~~~~~~~~~~~ll~~~~~------~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         147 GNTPLHWAALNGDADIVELLLEAGAD------PNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CCchhHHHHHcCchHHHHHHHhcCCC------CcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            99999999999999999999999888      7778999999999999999999999998864


No 76 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.65  E-value=3.5e-15  Score=115.85  Aligned_cols=130  Identities=29%  Similarity=0.383  Sum_probs=117.9

Q ss_pred             hhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCC-----hHHHHHHHHHHh--cccccccc
Q 037085           44 LEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSR-----SDAFQALVDEAK--SHRKEHLF  116 (248)
Q Consensus        44 ~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~-----~~~~~~Ll~~~~--~~~~~~~~  116 (248)
                      ...+..+.+++|.++..+..+++++++..+.+ ++.++..|.||||+|+..++     .++++.|++.|+  ..     .
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~-----~  140 (235)
T COG0666          67 AARDLDGRLPLHSAASKGDDKIVKLLLASGAD-VNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDV-----N  140 (235)
T ss_pred             ccCCccccCHHHHHHHcCcHHHHHHHHHcCCC-cccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCC-----c
Confidence            45566789999999999999999999998555 59999999999999999999     999999999998  31     6


Q ss_pred             ccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhh
Q 037085          117 TWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAV  189 (248)
Q Consensus       117 ~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g  189 (248)
                      +.+|..|.||||+|+..|+.+++++|++.|+      +++.++..|.|+++.|+..    +..+++..+.+.+
T Consensus       141 ~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~------~~~~~~~~g~t~l~~a~~~----~~~~~~~~l~~~~  203 (235)
T COG0666         141 NLRDEDGNTPLHWAALNGDADIVELLLEAGA------DPNSRNSYGVTALDPAAKN----GRIELVKLLLDKG  203 (235)
T ss_pred             cccCCCCCchhHHHHHcCchHHHHHHHhcCC------CCcccccCCCcchhhhccc----chHHHHHHHHhcC
Confidence            7789999999999999999999999999998      7888899999999999887    7889999999876


No 77 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.60  E-value=8.9e-15  Score=93.36  Aligned_cols=104  Identities=19%  Similarity=0.219  Sum_probs=89.5

Q ss_pred             CCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCC
Q 037085           17 ETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSR   96 (248)
Q Consensus        17 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~   96 (248)
                      ...+.|++++|.++-|+..+..+.++...  ..|++|||+|+..|+.+++++|+..+ ..++.+|+.|-|||..|+..||
T Consensus         3 d~~~~W~vkNG~~DeVk~~v~~g~nVn~~--~ggR~plhyAAD~GQl~ilefli~iG-A~i~~kDKygITPLLsAvwEGH   79 (117)
T KOG4214|consen    3 DMSVAWNVKNGEIDEVKQSVNEGLNVNEI--YGGRTPLHYAADYGQLSILEFLISIG-ANIQDKDKYGITPLLSAVWEGH   79 (117)
T ss_pred             chhHhhhhccCcHHHHHHHHHccccHHHH--hCCcccchHhhhcchHHHHHHHHHhc-cccCCccccCCcHHHHHHHHhh
Confidence            35678999999999999999998776433  38999999999999999999999984 5689999999999999999999


Q ss_pred             hHHHHHHHHHHhccccccccccccCCCCcHhHH
Q 037085           97 SDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHL  129 (248)
Q Consensus        97 ~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~  129 (248)
                      .++|++|++.|++      -..+.-+|.+.+..
T Consensus        80 ~~cVklLL~~GAd------rt~~~PdG~~~~ea  106 (117)
T KOG4214|consen   80 RDCVKLLLQNGAD------RTIHAPDGTALIEA  106 (117)
T ss_pred             HHHHHHHHHcCcc------cceeCCCchhHHhh
Confidence            9999999999998      55566677665543


No 78 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.54  E-value=4.6e-15  Score=131.36  Aligned_cols=135  Identities=19%  Similarity=0.205  Sum_probs=103.0

Q ss_pred             chhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCC
Q 037085            6 PQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGE   85 (248)
Q Consensus         6 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~   85 (248)
                      ...+..+|+.|.+||-+|+-.||..+|+.|++..+++.-+.|..+.|+|.+||..|..+++++||..+.. -..++-...
T Consensus       780 ganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gan-kehrnvsDy  858 (2131)
T KOG4369|consen  780 GANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGAN-KEHRNVSDY  858 (2131)
T ss_pred             cccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhcc-ccccchhhc
Confidence            3445677889999999999999999999999998888777888899999999999999999999987543 445566677


Q ss_pred             cHHHHHHHcCChHHHHHHHHHHhcccccccccccc--CCCCcHhHHHHhCCcHHHHHHHHhhcc
Q 037085           86 TALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKD--KEGNTVLHLATLNKLKQIVELLIRENS  147 (248)
Q Consensus        86 t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~--~~g~t~Lh~A~~~~~~~~v~~Ll~~g~  147 (248)
                      |||.+|...|..++++.|+..|..      ++.+.  +.|-.||++|...|+...++.|++.|.
T Consensus       859 tPlsla~Sggy~~iI~~llS~Gse------InSrtgSklgisPLmlatmngh~~at~~ll~~gs  916 (2131)
T KOG4369|consen  859 TPLSLARSGGYTKIIHALLSSGSE------INSRTGSKLGISPLMLATMNGHQAATLSLLQPGS  916 (2131)
T ss_pred             CchhhhcCcchHHHHHHHhhcccc------cccccccccCcchhhhhhhccccHHHHHHhcccc
Confidence            888888888888888888888766      33332  455666666666666666666666554


No 79 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.53  E-value=3.3e-14  Score=84.90  Aligned_cols=54  Identities=28%  Similarity=0.516  Sum_probs=34.9

Q ss_pred             CCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHH
Q 037085           16 GETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALV   70 (248)
Q Consensus        16 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll   70 (248)
                      |.|+||+|+..|+.+++++|++++.++ +.+|.+|.||||+|+..|+.+++++||
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~di-n~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADI-NAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGT-T-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            567777777777777777777777666 555777777777777777777777765


No 80 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.53  E-value=8.4e-15  Score=87.99  Aligned_cols=48  Identities=35%  Similarity=0.472  Sum_probs=29.0

Q ss_pred             cccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHH
Q 037085          116 FTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLC  169 (248)
Q Consensus       116 ~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a  169 (248)
                      ++.+|..|+||||+|+..|+.+++++|++.|+      |++.+|..|+||+|+|
T Consensus         9 ~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~------d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    9 VNAQDKYGNTPLHWAARYGHSEVVRLLLQNGA------DPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             TT---TTS--HHHHHHHHT-HHHHHHHHHCT--------TT---TTS--HHHH-
T ss_pred             CcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcC------CCCCCcCCCCCHHHhC
Confidence            77888888888888888888888888887776      7888888888888876


No 81 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.50  E-value=8.1e-14  Score=124.13  Aligned_cols=111  Identities=23%  Similarity=0.259  Sum_probs=92.2

Q ss_pred             HHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHh
Q 037085           53 PLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATL  132 (248)
Q Consensus        53 ~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~  132 (248)
                      .|+.|+..|+.++++.|++.+ .+++.+|..|.||||+|+..|+.+++++|+++|++      ++.+|..|.||||+|+.
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~G-adin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad------vn~~d~~G~TpLh~A~~  157 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTGG-ADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGAD------PTLLDKDGKTPLELAEE  157 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHH
Confidence            478899999999999999984 45788899999999999999999999999999988      88999999999999999


Q ss_pred             CCcHHHHHHHHhhcc-cccccccccccCCCCCCHHHHHH
Q 037085          133 NKLKQIVELLIRENS-NRRIMIRINTVNKQGQTALQLCN  170 (248)
Q Consensus       133 ~~~~~~v~~Ll~~g~-~~~~~~~~~~~~~~g~tpl~~a~  170 (248)
                      .++.+++++|++++. +...+.+.+..+..|.+|+..+.
T Consensus       158 ~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        158 NGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             CCcHHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence            999999999998811 11112266777777777766553


No 82 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.49  E-value=7.1e-14  Score=83.44  Aligned_cols=53  Identities=30%  Similarity=0.469  Sum_probs=24.0

Q ss_pred             CCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHH
Q 037085           84 GETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELL  142 (248)
Q Consensus        84 g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~L  142 (248)
                      |.||||+|+..|+.+++++|+++|.+      ++.+|.+|+||||+|+..|+.+++++|
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~d------in~~d~~g~t~lh~A~~~g~~~~~~~L   53 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGAD------INAQDEDGRTPLHYAAKNGNIDIVKFL   53 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSG------TT-B-TTS--HHHHHHHTT-HHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHccCHHHHHHH
Confidence            34555555555555555555554444      444455555555555555555555544


No 83 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.48  E-value=3e-14  Score=85.54  Aligned_cols=50  Identities=30%  Similarity=0.431  Sum_probs=16.7

Q ss_pred             hhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHH
Q 037085           75 ESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLA  130 (248)
Q Consensus        75 ~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A  130 (248)
                      .+++.+|..|.||||+|+..|+.+++++|++.+++      ++.+|..|+||||+|
T Consensus         7 ~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d------~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    7 ADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGAD------PNAKDKDGQTPLHYA   56 (56)
T ss_dssp             --TT---TTS--HHHHHHHHT-HHHHHHHHHCT--------TT---TTS--HHHH-
T ss_pred             CCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCC------CCCCcCCCCCHHHhC
Confidence            34444444455555555555555555554444444      444455555555443


No 84 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.47  E-value=1.5e-13  Score=122.38  Aligned_cols=105  Identities=23%  Similarity=0.227  Sum_probs=93.4

Q ss_pred             HHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChH
Q 037085           19 TMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSD   98 (248)
Q Consensus        19 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~   98 (248)
                      .|+.|+..|+.++++.|++.+.++ +.+|..|.||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+..++.+
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~Gadi-n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~G-advn~~d~~G~TpLh~A~~~g~~~  162 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTGGADP-NCRDYDGRTPLHIACANGHVQVVRVLLEFG-ADPTLLDKDGKTPLELAEENGFRE  162 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCCcHH
Confidence            488999999999999999999998 788999999999999999999999999984 558899999999999999999999


Q ss_pred             HHHHHHHH-------HhccccccccccccCCCCcHhHHHH
Q 037085           99 AFQALVDE-------AKSHRKEHLFTWKDKEGNTVLHLAT  131 (248)
Q Consensus        99 ~~~~Ll~~-------~~~~~~~~~~~~~~~~g~t~Lh~A~  131 (248)
                      ++++|+.+       +++      .+..+..|.+|+..+.
T Consensus       163 iv~~Ll~~~~~~~~~ga~------~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        163 VVQLLSRHSQCHFELGAN------AKPDSFTGKPPSLEDS  196 (664)
T ss_pred             HHHHHHhCCCcccccCCC------CCccccCCCCccchhh
Confidence            99999988       554      6667777777766554


No 85 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46  E-value=2.2e-13  Score=112.44  Aligned_cols=126  Identities=20%  Similarity=0.252  Sum_probs=105.4

Q ss_pred             CCcHHH---HHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcH
Q 037085           50 LMIPLH---RAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTV  126 (248)
Q Consensus        50 g~t~L~---~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~  126 (248)
                      .++||-   -|+-.|-.|+|+.++.. -.++...+.+|.|+||-|+..||.+||++|++.|++      +|..|.+|+||
T Consensus       547 rfnPLaLLLDaaLeGEldlVq~~i~e-v~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~gan------VNa~DSdGWTP  619 (752)
T KOG0515|consen  547 RFNPLALLLDAALEGELDLVQRIIYE-VTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGAN------VNAADSDGWTP  619 (752)
T ss_pred             ecchHHHHHhhhhcchHHHHHHHHHh-hcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCc------ccCccCCCCch
Confidence            345543   46778999999999987 455777788999999999999999999999999999      99999999999


Q ss_pred             hHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhh
Q 037085          127 LHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAV  189 (248)
Q Consensus       127 Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g  189 (248)
                      ||+|+.-++..+++.|++.|+     +-+-..-.++.||.+-+-+.  .+++..+.++|....
T Consensus       620 LHCAASCNnv~~ckqLVe~Ga-----avfAsTlSDmeTa~eKCee~--eeGY~~CsqyL~~vq  675 (752)
T KOG0515|consen  620 LHCAASCNNVPMCKQLVESGA-----AVFASTLSDMETAAEKCEEM--EEGYDQCSQYLYGVQ  675 (752)
T ss_pred             hhhhhhcCchHHHHHHHhccc-----eEEeeecccccchhhhcchh--hhhHHHHHHHHHHHH
Confidence            999999999999999999998     23344456788998887655  457888999987543


No 86 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.45  E-value=6.3e-13  Score=102.22  Aligned_cols=124  Identities=17%  Similarity=0.184  Sum_probs=104.7

Q ss_pred             CCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHc
Q 037085           15 RGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKK   94 (248)
Q Consensus        15 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~   94 (248)
                      .-..+|.-++..++.+-...|++....+ +.+|..|.+||..|+..|+.++++.||+.+.+.....+..+.||||+|+.+
T Consensus        11 ~~~~~Lle~i~Kndt~~a~~LLs~vr~v-n~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALS   89 (396)
T KOG1710|consen   11 APKSPLLEAIDKNDTEAALALLSTVRQV-NQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALS   89 (396)
T ss_pred             chhhHHHHHHccCcHHHHHHHHHHhhhh-hccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHc
Confidence            3457888899999999888888886666 788999999999999999999999999987665556677889999999999


Q ss_pred             CChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhh
Q 037085           95 SRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRE  145 (248)
Q Consensus        95 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~  145 (248)
                      |+.++.++|++.|+.      ....+.-|+|+-.+|+.-|+.++|..+-.+
T Consensus        90 Gn~dvcrllldaGa~------~~~vNsvgrTAaqmAAFVG~H~CV~iINN~  134 (396)
T KOG1710|consen   90 GNQDVCRLLLDAGAR------MYLVNSVGRTAAQMAAFVGHHECVAIINNH  134 (396)
T ss_pred             CCchHHHHHHhccCc------cccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence            999999999999888      667788899999999999998888776443


No 87 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.38  E-value=1.4e-12  Score=107.84  Aligned_cols=118  Identities=16%  Similarity=0.191  Sum_probs=101.1

Q ss_pred             HHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHH
Q 037085           20 MHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDA   99 (248)
Q Consensus        20 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~   99 (248)
                      |.-|+..|-+++|+.++..-.++ ...+..|.|+||-|+-.||++||++|++. +.++|..|++|+||||.|+..++..+
T Consensus       554 LLDaaLeGEldlVq~~i~ev~Dp-SqpNdEGITaLHNAiCaghyeIVkFLi~~-ganVNa~DSdGWTPLHCAASCNnv~~  631 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEVTDP-SQPNDEGITALHNAICAGHYEIVKFLIEF-GANVNAADSDGWTPLHCAASCNNVPM  631 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhhcCC-CCCCccchhHHhhhhhcchhHHHHHHHhc-CCcccCccCCCCchhhhhhhcCchHH
Confidence            34578889999999999988887 77899999999999999999999999998 56699999999999999999999999


Q ss_pred             HHHHHHHHhccccccccccccCCCCcHhHHHH--hCCcHHHHHHHHh
Q 037085          100 FQALVDEAKSHRKEHLFTWKDKEGNTVLHLAT--LNKLKQIVELLIR  144 (248)
Q Consensus       100 ~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~--~~~~~~~v~~Ll~  144 (248)
                      ++.|++.|+..     +-..-.++.|+..-+-  ..|...+.++|..
T Consensus       632 ckqLVe~Gaav-----fAsTlSDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  632 CKQLVESGAAV-----FASTLSDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             HHHHHhccceE-----EeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence            99999999874     4445567788876664  4577888888854


No 88 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.36  E-value=5.7e-12  Score=97.03  Aligned_cols=120  Identities=23%  Similarity=0.218  Sum_probs=104.1

Q ss_pred             CCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHH
Q 037085           50 LMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHL  129 (248)
Q Consensus        50 g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~  129 (248)
                      -..||.-++..+..+-...||+. -..++.+|.+|.|+|..|+..|+.+++++|++.|++.+     ..++.-+.||||.
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~-vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN-----~~qhg~~YTpLmF   85 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLST-VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVN-----DKQHGTLYTPLMF   85 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHH-hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcC-----cccccccccHHHH
Confidence            35789999999999999999987 45589999999999999999999999999999999932     3466789999999


Q ss_pred             HHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHH
Q 037085          130 ATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWII  185 (248)
Q Consensus       130 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L  185 (248)
                      |+..|+.++.+.|++.|+      .....|.-|+|+-..|+.-    ++.+++.++
T Consensus        86 AALSGn~dvcrllldaGa------~~~~vNsvgrTAaqmAAFV----G~H~CV~iI  131 (396)
T KOG1710|consen   86 AALSGNQDVCRLLLDAGA------RMYLVNSVGRTAAQMAAFV----GHHECVAII  131 (396)
T ss_pred             HHHcCCchHHHHHHhccC------ccccccchhhhHHHHHHHh----cchHHHHHH
Confidence            999999999999999998      6777899999999999876    455555443


No 89 
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.05  E-value=2e-10  Score=94.05  Aligned_cols=93  Identities=22%  Similarity=0.271  Sum_probs=67.9

Q ss_pred             ccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHH
Q 037085           13 NQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAV   92 (248)
Q Consensus        13 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~   92 (248)
                      ..++...+++|++.|++..++.+.-.+.+. ..+|.+..|+||.|+..|+.+++++|++.+..+++.+|..|+|||.-|.
T Consensus       503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~-~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~  581 (622)
T KOG0506|consen  503 ENDTVINVMYAAKNGDLSALRRFALQGMDL-ETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAK  581 (622)
T ss_pred             cccchhhhhhhhhcCCHHHHHHHHHhcccc-cccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhH
Confidence            445566777777777777777777777776 6677777777777777777777777777777677777777777777777


Q ss_pred             HcCChHHHHHHHHH
Q 037085           93 KKSRSDAFQALVDE  106 (248)
Q Consensus        93 ~~~~~~~~~~Ll~~  106 (248)
                      .++|.+++++|-+.
T Consensus       582 ~F~h~~v~k~L~~~  595 (622)
T KOG0506|consen  582 HFKHKEVVKLLEEA  595 (622)
T ss_pred             hcCcHHHHHHHHHH
Confidence            77777777777554


No 90 
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.00  E-value=4.7e-10  Score=91.97  Aligned_cols=98  Identities=17%  Similarity=0.216  Sum_probs=87.5

Q ss_pred             cCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCC
Q 037085           82 SNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQ  161 (248)
Q Consensus        82 ~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~  161 (248)
                      .++..++.+|+..|....++.+.-.|.+      ++.+|.+.+|+||.|+..|+.+++++|++...     ++++.+|.+
T Consensus       504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D------~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~k-----v~~~~kDRw  572 (622)
T KOG0506|consen  504 NDTVINVMYAAKNGDLSALRRFALQGMD------LETKDYDDRTALHVAAAEGHVEVVKFLLNACK-----VDPDPKDRW  572 (622)
T ss_pred             ccchhhhhhhhhcCCHHHHHHHHHhccc------ccccccccchhheeecccCceeHHHHHHHHHc-----CCCChhhcc
Confidence            4566789999999999999999888888      99999999999999999999999999999875     689999999


Q ss_pred             CCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCC
Q 037085          162 GQTALQLCNANSQDSVFKEIGWIIQRAVAQQSP  194 (248)
Q Consensus       162 g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~  194 (248)
                      |+|||+-|...    .+.+++++|.+.......
T Consensus       573 ~rtPlDdA~~F----~h~~v~k~L~~~~~~y~~  601 (622)
T KOG0506|consen  573 GRTPLDDAKHF----KHKEVVKLLEEAQYPYTL  601 (622)
T ss_pred             CCCcchHhHhc----CcHHHHHHHHHHhccccc
Confidence            99999999877    789999999987665444


No 91 
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.95  E-value=5.1e-10  Score=97.48  Aligned_cols=89  Identities=24%  Similarity=0.349  Sum_probs=71.2

Q ss_pred             CchhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCC
Q 037085            5 WPQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNG   84 (248)
Q Consensus         5 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g   84 (248)
                      +..+++++|..|+|+||+|+..+...+++.|+++|.++.-+-...|+||||.|+..|+.+++..||.+ +.....+|++|
T Consensus        41 c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~-g~SL~i~Dkeg  119 (1267)
T KOG0783|consen   41 CQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSK-GRSLRIKDKEG  119 (1267)
T ss_pred             hhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhc-CCceEEecccC
Confidence            34567888888888888888888888888888888888544455788888888888888888888887 45677888888


Q ss_pred             CcHHHHHHHc
Q 037085           85 ETALHLAVKK   94 (248)
Q Consensus        85 ~t~lh~a~~~   94 (248)
                      .+||.+.++-
T Consensus       120 lsplq~~~r~  129 (1267)
T KOG0783|consen  120 LSPLQFLSRV  129 (1267)
T ss_pred             CCHHHHHhhc
Confidence            8888887663


No 92 
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.94  E-value=8.5e-10  Score=96.13  Aligned_cols=89  Identities=24%  Similarity=0.337  Sum_probs=53.4

Q ss_pred             HhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhcccccccccccc-CCCCcHhHHHHhCCcHHHHHHHHhhcccc
Q 037085           71 SICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKD-KEGNTVLHLATLNKLKQIVELLIRENSNR  149 (248)
Q Consensus        71 ~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~  149 (248)
                      +.|....+++|..|+|+||+++..+..+++++|+++|.+      +..+| ..|.||||-|...|+.+++-.|+.+|+  
T Consensus        39 k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGid------v~vqD~ESG~taLHRaiyyG~idca~lLL~~g~--  110 (1267)
T KOG0783|consen   39 KSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGID------VFVQDEESGYTALHRAIYYGNIDCASLLLSKGR--  110 (1267)
T ss_pred             HhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCce------eeeccccccchHhhHhhhhchHHHHHHHHhcCC--
Confidence            344444556666666666666666666666666666655      55555 346666666666666666666666665  


Q ss_pred             cccccccccCCCCCCHHHHHHH
Q 037085          150 RIMIRINTVNKQGQTALQLCNA  171 (248)
Q Consensus       150 ~~~~~~~~~~~~g~tpl~~a~~  171 (248)
                          .+...|++|..||+..++
T Consensus       111 ----SL~i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen  111 ----SLRIKDKEGLSPLQFLSR  128 (1267)
T ss_pred             ----ceEEecccCCCHHHHHhh
Confidence                455566666666665543


No 93 
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.93  E-value=5.7e-09  Score=87.61  Aligned_cols=119  Identities=24%  Similarity=0.224  Sum_probs=99.1

Q ss_pred             HHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCch-hhhhhccCCCcHHHHHHHcCChH
Q 037085           20 MHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPE-SLEKLTSNGETALHLAVKKSRSD   98 (248)
Q Consensus        20 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~-~~~~~~~~g~t~lh~a~~~~~~~   98 (248)
                      +..|+..+++--++.....|.++ ..++.+-.+.||+|+..|+-++++++|++++. ..+..|..|.|+||-|+..++..
T Consensus       870 il~av~~~D~~klqE~h~~gg~l-l~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~  948 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSL-LIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRA  948 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCce-EeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchH
Confidence            34455555544444455556666 56788888999999999999999999999764 46778899999999999999999


Q ss_pred             HHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhh
Q 037085           99 AFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRE  145 (248)
Q Consensus        99 ~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~  145 (248)
                      ++++|++.|+.      +...|..|.||-.-|-..|..+++-+|-.+
T Consensus       949 vc~~lvdagas------l~ktd~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  949 VCQLLVDAGAS------LRKTDSKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             HHHHHHhcchh------heecccCCCChHHHHHhcCCchHHHHHhhh
Confidence            99999999998      888999999999999999999999888654


No 94 
>PF13962 PGG:  Domain of unknown function
Probab=98.91  E-value=1.1e-09  Score=75.59  Aligned_cols=37  Identities=32%  Similarity=0.612  Sum_probs=34.3

Q ss_pred             cCCchhhhhhHHHHHHHHHHHHHHhhcCCCCccCCCC
Q 037085          209 TRWPIETRNVLLMVVVTIAAAFFTVTCNLPDSFLKED  245 (248)
Q Consensus       209 ~~~~~~~~~~~~~~~~li~~~~f~~~~~~pgg~~~~~  245 (248)
                      ++|+++.++.+++||+||+|++|++++++||||.+++
T Consensus         1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~   37 (113)
T PF13962_consen    1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDD   37 (113)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Confidence            3689999999999999999999999999999997764


No 95 
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.91  E-value=5.6e-09  Score=86.18  Aligned_cols=88  Identities=18%  Similarity=0.183  Sum_probs=75.4

Q ss_pred             HHHHHHHcCChHHHHHHHHHHhcccccccccccc-CCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCH
Q 037085           87 ALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKD-KEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTA  165 (248)
Q Consensus        87 ~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tp  165 (248)
                      -||..++.++.+..-.|+..|++      .|..+ ..|.||||+|+..|+..=+++|+-+|+      |+++.|.+|.||
T Consensus       136 QLhasvRt~nlet~LRll~lGA~------~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGA------D~~a~d~~GmtP  203 (669)
T KOG0818|consen  136 QLHSSVRTGNLETCLRLLSLGAQ------ANFFHPEKGNTPLHVAAKAGQILQAELLAVYGA------DPGAQDSSGMTP  203 (669)
T ss_pred             HHHHHhhcccHHHHHHHHHcccc------cCCCCcccCCchhHHHHhccchhhhhHHhhccC------CCCCCCCCCCcH
Confidence            48999999999999999999998      66655 689999999999999999999999998      899999999999


Q ss_pred             HHHHHHcCCCchHHHHHHHHHHhhh
Q 037085          166 LQLCNANSQDSVFKEIGWIIQRAVA  190 (248)
Q Consensus       166 l~~a~~~~~~~~~~~i~~~L~~~g~  190 (248)
                      +++|-..    ++.++.+.|.+...
T Consensus       204 ~~~AR~~----gH~~laeRl~e~~y  224 (669)
T KOG0818|consen  204 VDYARQG----GHHELAERLVEIQY  224 (669)
T ss_pred             HHHHHhc----CchHHHHHHHHHHH
Confidence            9999887    45555555554433


No 96 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.84  E-value=3.5e-09  Score=54.48  Aligned_cols=26  Identities=42%  Similarity=0.563  Sum_probs=24.2

Q ss_pred             CCCcHhHHHHhCCcHHHHHHHHhhcc
Q 037085          122 EGNTVLHLATLNKLKQIVELLIRENS  147 (248)
Q Consensus       122 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~  147 (248)
                      +|+||||+|++.|+.+++++|+++|+
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~ga   26 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGA   26 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCC
Confidence            58999999999999999999999997


No 97 
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.83  E-value=5.9e-09  Score=55.14  Aligned_cols=33  Identities=36%  Similarity=0.565  Sum_probs=29.4

Q ss_pred             CCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCC
Q 037085          122 EGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNK  160 (248)
Q Consensus       122 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~  160 (248)
                      +|+||||+|+..++.+++++|+++|+      +++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga------~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGA------DINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTS------CTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcC------CCCCCCC
Confidence            58999999999999999999999998      7777664


No 98 
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.81  E-value=1.5e-08  Score=85.23  Aligned_cols=119  Identities=18%  Similarity=0.251  Sum_probs=96.6

Q ss_pred             HHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCC
Q 037085           55 HRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNK  134 (248)
Q Consensus        55 ~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~  134 (248)
                      ..|+..++.--++..-..++. .-.++.+-.+.||+|+..|+-+++++++.+|..    .++++.|..|+|+||.|+..+
T Consensus       871 l~av~~~D~~klqE~h~~gg~-ll~~~~~~~sllh~a~~tg~~eivkyildh~p~----elld~~de~get~lhkaa~~~  945 (1004)
T KOG0782|consen  871 LRAVLSSDLMKLQETHLNGGS-LLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPS----ELLDMADETGETALHKAACQR  945 (1004)
T ss_pred             HHHHHhccHHHHHHHHhcCCc-eEeeCcchhhHHHHHHhcCChHHHHHHHhcCCH----HHHHHHhhhhhHHHHHHHHhc
Confidence            344555554444444445443 556678889999999999999999999999765    558899999999999999999


Q ss_pred             cHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHh
Q 037085          135 LKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRA  188 (248)
Q Consensus       135 ~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~  188 (248)
                      +-.+..+|++.|+      .+...|..|.||-..|-..    +..++..+|-+.
T Consensus       946 ~r~vc~~lvdaga------sl~ktd~kg~tp~eraqqa----~d~dlaayle~r  989 (1004)
T KOG0782|consen  946 NRAVCQLLVDAGA------SLRKTDSKGKTPQERAQQA----GDPDLAAYLESR  989 (1004)
T ss_pred             chHHHHHHHhcch------hheecccCCCChHHHHHhc----CCchHHHHHhhh
Confidence            9999999999998      5778999999999999776    677888888754


No 99 
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.76  E-value=3.5e-08  Score=81.62  Aligned_cols=87  Identities=17%  Similarity=0.093  Sum_probs=77.4

Q ss_pred             HHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChH
Q 037085           19 TMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSD   98 (248)
Q Consensus        19 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~   98 (248)
                      -||-.++.|+.+..-.||..|++.++.....|.||||.|++.|+..-+++|+-. +.++...|.+|.||+.+|-..||.+
T Consensus       136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vY-GAD~~a~d~~GmtP~~~AR~~gH~~  214 (669)
T KOG0818|consen  136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVY-GADPGAQDSSGMTPVDYARQGGHHE  214 (669)
T ss_pred             HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhc-cCCCCCCCCCCCcHHHHHHhcCchH
Confidence            578899999999999999999999888888999999999999999999999987 5568889999999999999999988


Q ss_pred             HHHHHHHH
Q 037085           99 AFQALVDE  106 (248)
Q Consensus        99 ~~~~Ll~~  106 (248)
                      +.+.|++.
T Consensus       215 laeRl~e~  222 (669)
T KOG0818|consen  215 LAERLVEI  222 (669)
T ss_pred             HHHHHHHH
Confidence            87777654


No 100
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.71  E-value=1.9e-08  Score=51.68  Aligned_cols=28  Identities=25%  Similarity=0.593  Sum_probs=16.7

Q ss_pred             CCCCHHHHHHhCCCHHHHHHHHhcCcch
Q 037085           15 RGETTMHLLSTDGDARMVRIFGENNREL   42 (248)
Q Consensus        15 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~   42 (248)
                      +|+||||+||+.|+.+++++|+++++++
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadv   28 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADV   28 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence            3566666666666666666666665544


No 101
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.60  E-value=1.6e-07  Score=78.49  Aligned_cols=89  Identities=29%  Similarity=0.410  Sum_probs=71.8

Q ss_pred             cHHHHHHHhCCHHHHHH-HHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHH
Q 037085           52 IPLHRAALEGDSDVIRA-LVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLA  130 (248)
Q Consensus        52 t~L~~A~~~g~~~~~~~-Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A  130 (248)
                      -|+|+++.....+-+.. |.......++.+|..|.||||+|+.-|+...++.|+..+++      +..+|+.|++|||.|
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Ad------v~~kN~~gWs~L~EA   95 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGAD------VSIKNNEGWSPLHEA   95 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCC------ccccccccccHHHHH
Confidence            45888887766554444 33333456788889999999999999999999999999888      888999999999999


Q ss_pred             HhCCcHHHHHHHHhhc
Q 037085          131 TLNKLKQIVELLIREN  146 (248)
Q Consensus       131 ~~~~~~~~v~~Ll~~g  146 (248)
                      +..|+.+++..++.+.
T Consensus        96 v~~g~~q~i~~vlr~~  111 (560)
T KOG0522|consen   96 VSTGNEQIITEVLRHL  111 (560)
T ss_pred             HHcCCHHHHHHHHHHh
Confidence            9999998888888764


No 102
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.59  E-value=5.9e-08  Score=51.24  Aligned_cols=26  Identities=27%  Similarity=0.514  Sum_probs=13.7

Q ss_pred             CCcHHHHHHHcCChHHHHHHHHHHhc
Q 037085           84 GETALHLAVKKSRSDAFQALVDEAKS  109 (248)
Q Consensus        84 g~t~lh~a~~~~~~~~~~~Ll~~~~~  109 (248)
                      |.||||+|+..++.+++++|+++|++
T Consensus         2 G~TpLh~A~~~~~~~~v~~Ll~~ga~   27 (33)
T PF00023_consen    2 GNTPLHYAAQRGHPDIVKLLLKHGAD   27 (33)
T ss_dssp             SBBHHHHHHHTTCHHHHHHHHHTTSC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHCcCC
Confidence            45555555555555555555555544


No 103
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.58  E-value=1.1e-07  Score=79.49  Aligned_cols=112  Identities=17%  Similarity=0.126  Sum_probs=85.6

Q ss_pred             CHHHHHHhCCCHHHHHHHHh-cCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCC
Q 037085           18 TTMHLLSTDGDARMVRIFGE-NNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSR   96 (248)
Q Consensus        18 t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~   96 (248)
                      -|+|+++.....+.....+. .-....+.+|..|.||||.|+..|+.+.++.|+..++ ++..++..|++|||-|+..|+
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~A-dv~~kN~~gWs~L~EAv~~g~  100 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGA-DVSIKNNEGWSPLHEAVSTGN  100 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCC-CccccccccccHHHHHHHcCC
Confidence            45999998877765555433 3334447889999999999999999999999999954 577889999999999999999


Q ss_pred             hHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhc
Q 037085           97 SDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIREN  146 (248)
Q Consensus        97 ~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g  146 (248)
                      ..++..++.+-..         +.       -.-...+.+.+++.|.+.+
T Consensus       101 ~q~i~~vlr~~~~---------q~-------~~~~~~~~p~ll~~l~~~~  134 (560)
T KOG0522|consen  101 EQIITEVLRHLKY---------QA-------WEKWERRLPRLLAKLSEMP  134 (560)
T ss_pred             HHHHHHHHHHhHH---------HH-------HHHHHhcchHHHHHHHhCc
Confidence            9999888876332         00       0112345677777787766


No 104
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.54  E-value=1.9e-07  Score=78.66  Aligned_cols=95  Identities=21%  Similarity=0.136  Sum_probs=75.4

Q ss_pred             HHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHH
Q 037085           88 LHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQ  167 (248)
Q Consensus        88 lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~  167 (248)
                      |.-|+.......+-+|+.+|...  +.+-..-+.+|.|+||+|++.|+..+..+|+=+|+      |+.++|..|+|+|.
T Consensus       628 Ll~A~~~~Dl~t~~lLLAhg~~~--e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~------dv~~rda~g~t~l~  699 (749)
T KOG0705|consen  628 LLRAVAAEDLQTAILLLAHGSRE--EVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGV------DVMARDAHGRTALF  699 (749)
T ss_pred             HHHHHHHHHHHHHHHHHhccCch--hhhccccCCCCcchhhhhhhhcchhHHHHHHHhCc------cceecccCCchhhh
Confidence            34455556666777778776542  22233456678999999999999999999999887      89999999999999


Q ss_pred             HHHHcCCCchHHHHHHHHHHhhhhcCC
Q 037085          168 LCNANSQDSVFKEIGWIIQRAVAQQSP  194 (248)
Q Consensus       168 ~a~~~~~~~~~~~i~~~L~~~g~~~~~  194 (248)
                      +|-..    +..+++.+|+.+|.....
T Consensus       700 yar~a----~sqec~d~llq~gcp~e~  722 (749)
T KOG0705|consen  700 YARQA----GSQECIDVLLQYGCPDEC  722 (749)
T ss_pred             hHhhc----ccHHHHHHHHHcCCCccc
Confidence            99877    789999999999987543


No 105
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.54  E-value=2.3e-07  Score=78.18  Aligned_cols=89  Identities=24%  Similarity=0.225  Sum_probs=75.7

Q ss_pred             HHHHHHhCCHHHHHHHHHhCch---hhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHH
Q 037085           54 LHRAALEGDSDVIRALVSICPE---SLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLA  130 (248)
Q Consensus        54 L~~A~~~g~~~~~~~Ll~~~~~---~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A  130 (248)
                      |..|+...+...+-+||.++..   ..-..+.+|+|+||+|++.|+..+.++|+=+|++      +..+|..|+|+|.||
T Consensus       628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~d------v~~rda~g~t~l~ya  701 (749)
T KOG0705|consen  628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVD------VMARDAHGRTALFYA  701 (749)
T ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcc------ceecccCCchhhhhH
Confidence            5567777788888888887532   1123456789999999999999999999999988      888999999999999


Q ss_pred             HhCCcHHHHHHHHhhccc
Q 037085          131 TLNKLKQIVELLIRENSN  148 (248)
Q Consensus       131 ~~~~~~~~v~~Ll~~g~~  148 (248)
                      -..|..+++..|+++|..
T Consensus       702 r~a~sqec~d~llq~gcp  719 (749)
T KOG0705|consen  702 RQAGSQECIDVLLQYGCP  719 (749)
T ss_pred             hhcccHHHHHHHHHcCCC
Confidence            999999999999999973


No 106
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.47  E-value=1.1e-07  Score=85.36  Aligned_cols=132  Identities=21%  Similarity=0.091  Sum_probs=90.6

Q ss_pred             hhccCCCCHHHHHHhCCCHHHHHHHHhc-CcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHH
Q 037085           11 IKNQRGETTMHLLSTDGDARMVRIFGEN-NRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALH   89 (248)
Q Consensus        11 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh   89 (248)
                      ..+..|.+.+|+++..++..+++.+++- +... ...|.+|.-.+|. |..++.++.-+++...+..++.+|..|+||||
T Consensus       569 ~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~-~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~  646 (975)
T KOG0520|consen  569 SVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGD-LELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLH  646 (975)
T ss_pred             cCCCcchHHHHHHHHHhHHHHHHHHhcccccCc-hhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccc
Confidence            3455678888888888888888888775 3322 3456666666666 66677777777776666667778888888888


Q ss_pred             HHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHh
Q 037085           90 LAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIR  144 (248)
Q Consensus        90 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~  144 (248)
                      +|+..|+..++..|+..|+....--.....+-.|.|+--.|...|+..+.-+|-+
T Consensus       647 wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse  701 (975)
T KOG0520|consen  647 WAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSE  701 (975)
T ss_pred             hHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhh
Confidence            8888888888888887776644222233444567777777777777666665544


No 107
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.40  E-value=2.8e-07  Score=82.84  Aligned_cols=79  Identities=27%  Similarity=0.353  Sum_probs=75.1

Q ss_pred             cCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCC
Q 037085           82 SNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQ  161 (248)
Q Consensus        82 ~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~  161 (248)
                      ..|.|+||.|+..+...++++|++.|++      +|.+|..|+||+|.+...|+...+..|+++|+      +.++.+..
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~------vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a------~~~a~~~~  721 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGAD------VNALDSKGRTPLHHATASGHTSIACLLLKRGA------DPNAFDPD  721 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCCc------chhhhccCCCcchhhhhhcccchhhhhccccc------cccccCcc
Confidence            4679999999999999999999999998      99999999999999999999999999999998      88999999


Q ss_pred             CCCHHHHHHHc
Q 037085          162 GQTALQLCNAN  172 (248)
Q Consensus       162 g~tpl~~a~~~  172 (248)
                      |.+|+++|...
T Consensus       722 ~~~~l~~a~~~  732 (785)
T KOG0521|consen  722 GKLPLDIAMEA  732 (785)
T ss_pred             CcchhhHHhhh
Confidence            99999999876


No 108
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.38  E-value=1.2e-06  Score=77.31  Aligned_cols=131  Identities=17%  Similarity=0.039  Sum_probs=85.9

Q ss_pred             cHHHHHHHhCCHHHHHHHHHhCch---hhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhH
Q 037085           52 IPLHRAALEGDSDVIRALVSICPE---SLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLH  128 (248)
Q Consensus        52 t~L~~A~~~g~~~~~~~Ll~~~~~---~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh  128 (248)
                      --+-.|+..|+.-.++..++....   .+|..|.-|+++|++|+.+.+.++.++|+++...        .     ..+|-
T Consensus        27 ~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~--------~-----gdALL   93 (822)
T KOG3609|consen   27 KGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSE--------E-----GDALL   93 (822)
T ss_pred             HHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCccc--------c-----chHHH
Confidence            344566777777777776665332   3456666777777777777777777777665321        1     34667


Q ss_pred             HHHhCCcHHHHHHHHhhcccccc---cccc-cccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCC
Q 037085          129 LATLNKLKQIVELLIRENSNRRI---MIRI-NTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDA  199 (248)
Q Consensus       129 ~A~~~~~~~~v~~Ll~~g~~~~~---~~~~-~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~  199 (248)
                      +|+..|..++|+.++.+.....+   ..|. ...-..+.||+.+|+..    .+.||+++|++.|+.+..+....
T Consensus        94 ~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~----NnyEil~~Ll~kg~~i~~PH~~~  164 (822)
T KOG3609|consen   94 LAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHL----NNFEILQCLLTRGHCIPIPHDIR  164 (822)
T ss_pred             HHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHh----cchHHHHHHHHcCCCCCCCcccc
Confidence            77777777777777765431100   0011 12234578999999988    78999999999999998766543


No 109
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.33  E-value=1.4e-06  Score=76.81  Aligned_cols=127  Identities=18%  Similarity=0.057  Sum_probs=100.1

Q ss_pred             cCCCCHHHHHHhCCCHHHHHHHHhcCcc---hhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHH
Q 037085           14 QRGETTMHLLSTDGDARMVRIFGENNRE---LCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHL   90 (248)
Q Consensus        14 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~---~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~   90 (248)
                      ..+.-.+..|+..|+...|+..++....   ..+.+|.-|.++|+.|+.+.+.+++++|++. +...       ..+|.+
T Consensus        23 ~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~-~~~~-------gdALL~   94 (822)
T KOG3609|consen   23 NEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDT-SSEE-------GDALLL   94 (822)
T ss_pred             chhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcC-cccc-------chHHHH
Confidence            3455567889999999999999987654   3378899999999999999999999999998 3211       568999


Q ss_pred             HHHcCChHHHHHHHHHHhcccccc----ccccccCCCCcHhHHHHhCCcHHHHHHHHhhccc
Q 037085           91 AVKKSRSDAFQALVDEAKSHRKEH----LFTWKDKEGNTVLHLATLNKLKQIVELLIRENSN  148 (248)
Q Consensus        91 a~~~~~~~~~~~Ll~~~~~~~~~~----~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~  148 (248)
                      |+..+..++++.++.+-.......    .-...-.-+-||+.+||..++.+++++|+.+|+.
T Consensus        95 aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~  156 (822)
T KOG3609|consen   95 AIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHC  156 (822)
T ss_pred             HHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCC
Confidence            999999999999998733211000    0012234567999999999999999999999985


No 110
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.30  E-value=6.7e-07  Score=80.45  Aligned_cols=131  Identities=20%  Similarity=0.193  Sum_probs=97.9

Q ss_pred             hcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHH-HHhccccccccccccCCCC
Q 037085           46 VDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVD-EAKSHRKEHLFTWKDKEGN  124 (248)
Q Consensus        46 ~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~~~~g~  124 (248)
                      ....|.+.+|+++..+..-+++.+++--.......|..|...+|+++ .++.+.+-+++. .|..      ++.+|..|+
T Consensus       570 ~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca-~lg~ewA~ll~~~~~~a------i~i~D~~G~  642 (975)
T KOG0520|consen  570 VNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCA-ALGYEWAFLPISADGVA------IDIRDRNGW  642 (975)
T ss_pred             CCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhh-hcCCceeEEEEeecccc------cccccCCCC
Confidence            45578999999999999999999998512223456788888899854 455555544443 3333      899999999


Q ss_pred             cHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHH
Q 037085          125 TVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQR  187 (248)
Q Consensus       125 t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~  187 (248)
                      ||||+|+..|+..++..|++.|+++--..|+......|.|+-.+|..+    ++..+.-+|.+
T Consensus       643 tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~----g~~gia~~lse  701 (975)
T KOG0520|consen  643 TPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARAN----GHKGIAGYLSE  701 (975)
T ss_pred             cccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcc----cccchHHHHhh
Confidence            999999999999999999998886544446666667899999999766    45555555444


No 111
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.28  E-value=3.3e-06  Score=61.79  Aligned_cols=73  Identities=15%  Similarity=0.110  Sum_probs=62.6

Q ss_pred             ccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCC
Q 037085          115 LFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSP  194 (248)
Q Consensus       115 ~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~  194 (248)
                      .+|.+|..|+|+|+.|+..|+.+.+.+|+++|+     .++-..|..|.+++.+|-+.    ++.+++..|.+.-.+...
T Consensus         4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~-----a~vgv~d~ssldaaqlaek~----g~~~fvh~lfe~~~ets~   74 (223)
T KOG2384|consen    4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGV-----AFVGVTDESSLDAAQLAEKG----GAQAFVHSLFENDRETSH   74 (223)
T ss_pred             CccchhhhcchHHHHHhhhcchhHHHHHhccCc-----ccccccccccchHHHHHHhc----ChHHHHHHHHHHhccCCC
Confidence            389999999999999999999999999999995     38899999999999999877    788999999887544443


Q ss_pred             CC
Q 037085          195 QL  196 (248)
Q Consensus       195 ~~  196 (248)
                      .+
T Consensus        75 p~   76 (223)
T KOG2384|consen   75 PM   76 (223)
T ss_pred             cc
Confidence            33


No 112
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.16  E-value=5e-06  Score=67.05  Aligned_cols=71  Identities=24%  Similarity=0.205  Sum_probs=58.6

Q ss_pred             CCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHH
Q 037085           17 ETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALH   89 (248)
Q Consensus        17 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh   89 (248)
                      .--|+.||+.|+.+.|+.|++.|..+ +.+|....+||.+|+-+||.+++++|+++|+. ...-.-+|.-++.
T Consensus        37 f~elceacR~GD~d~v~~LVetgvnV-N~vD~fD~spL~lAsLcGHe~vvklLLenGAi-C~rdtf~G~RC~Y  107 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVNV-NAVDRFDSSPLYLASLCGHEDVVKLLLENGAI-CSRDTFDGDRCHY  107 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCCc-chhhcccccHHHHHHHcCcHHHHHHHHHcCCc-ccccccCcchhhh
Confidence            34579999999999999999999888 89999999999999999999999999999654 3332334554443


No 113
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.15  E-value=3e-06  Score=76.39  Aligned_cols=88  Identities=26%  Similarity=0.229  Sum_probs=78.5

Q ss_pred             CCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHh
Q 037085           48 NSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVL  127 (248)
Q Consensus        48 ~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~L  127 (248)
                      ..|.|+||.|+..|..-+.++|++.+ ++++..|..|++|+|.+...|+...+..++++|++      .+..+.+|.+||
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~g-a~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~------~~a~~~~~~~~l  726 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNG-ADVNALDSKGRTPLHHATASGHTSIACLLLKRGAD------PNAFDPDGKLPL  726 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcC-CcchhhhccCCCcchhhhhhcccchhhhhcccccc------ccccCccCcchh
Confidence            45789999999999999999999985 55999999999999999999999999999999998      888999999999


Q ss_pred             HHHHhCCcHHHHHHH
Q 037085          128 HLATLNKLKQIVELL  142 (248)
Q Consensus       128 h~A~~~~~~~~v~~L  142 (248)
                      ++|....+.+++-++
T Consensus       727 ~~a~~~~~~d~~~l~  741 (785)
T KOG0521|consen  727 DIAMEAANADIVLLL  741 (785)
T ss_pred             hHHhhhccccHHHHH
Confidence            999887666655444


No 114
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.10  E-value=1.3e-05  Score=64.73  Aligned_cols=82  Identities=23%  Similarity=0.337  Sum_probs=55.8

Q ss_pred             HHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccC-CCCcHhHHHH
Q 037085           53 PLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDK-EGNTVLHLAT  131 (248)
Q Consensus        53 ~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~-~g~t~Lh~A~  131 (248)
                      -|..||+.|..+.++.|++. +..+|.+|+...+||.+|+..||.+++++|+++|+       +..+|. +|.-+ |+++
T Consensus        39 elceacR~GD~d~v~~LVet-gvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGA-------iC~rdtf~G~RC-~Yga  109 (516)
T KOG0511|consen   39 ELCEACRAGDVDRVRYLVET-GVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGA-------ICSRDTFDGDRC-HYGA  109 (516)
T ss_pred             HHHHHhhcccHHHHHHHHHh-CCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCC-------cccccccCcchh-hhhh
Confidence            46778888888888888885 56678888888888888888888888888888876       444553 34433 4443


Q ss_pred             hCCcHHHHHHHHhh
Q 037085          132 LNKLKQIVELLIRE  145 (248)
Q Consensus       132 ~~~~~~~v~~Ll~~  145 (248)
                      .  +-.|-+.|+.+
T Consensus       110 L--nd~IR~mllsy  121 (516)
T KOG0511|consen  110 L--NDRIRRMLLSY  121 (516)
T ss_pred             h--hHHHHHHHHHH
Confidence            3  33444556554


No 115
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.01  E-value=1.4e-05  Score=58.66  Aligned_cols=64  Identities=14%  Similarity=0.124  Sum_probs=32.5

Q ss_pred             HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHh
Q 037085            9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSI   72 (248)
Q Consensus         9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~   72 (248)
                      ++..|..|+|+|++|+..|+.+.+.+|++++..-....|..+.+++.+|-+.|..++++.|.+.
T Consensus         5 in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~   68 (223)
T KOG2384|consen    5 INARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN   68 (223)
T ss_pred             ccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence            3444555555555555555555555555555222244455555555555555555555555443


No 116
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.63  E-value=0.00011  Score=61.63  Aligned_cols=78  Identities=22%  Similarity=0.230  Sum_probs=59.5

Q ss_pred             ChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCC
Q 037085           96 RSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQD  175 (248)
Q Consensus        96 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~  175 (248)
                      -+..+++|.+++.+.+........+..-.|+||+|+..|.-++|.+||+.|+      |+..+|..|+||++++.     
T Consensus       403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~------Dp~~kd~~Grtpy~ls~-----  471 (591)
T KOG2505|consen  403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGC------DPSTKDGAGRTPYSLSA-----  471 (591)
T ss_pred             chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcC------CchhcccCCCCcccccc-----
Confidence            3667788887766643333333445557799999999999999999999997      88999999999999884     


Q ss_pred             chHHHHHHHHH
Q 037085          176 SVFKEIGWIIQ  186 (248)
Q Consensus       176 ~~~~~i~~~L~  186 (248)
                        +.+|-..++
T Consensus       472 --nkdVk~~F~  480 (591)
T KOG2505|consen  472 --NKDVKSIFI  480 (591)
T ss_pred             --cHHHHHHHH
Confidence              345555554


No 117
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.96  E-value=0.0016  Score=31.91  Aligned_cols=25  Identities=24%  Similarity=0.585  Sum_probs=12.7

Q ss_pred             CCCHHHHHHhCCCHHHHHHHHhcCc
Q 037085           16 GETTMHLLSTDGDARMVRIFGENNR   40 (248)
Q Consensus        16 g~t~L~~A~~~g~~~~v~~Ll~~~~   40 (248)
                      |.|+||+|+..++.++++.|++.+.
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~   26 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGA   26 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            4455555555555555555554443


No 118
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.86  E-value=0.0018  Score=31.65  Aligned_cols=26  Identities=38%  Similarity=0.574  Sum_probs=20.9

Q ss_pred             CCCcHhHHHHhCCcHHHHHHHHhhcc
Q 037085          122 EGNTVLHLATLNKLKQIVELLIRENS  147 (248)
Q Consensus       122 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~  147 (248)
                      .|.||+|+|+..++.++++.|++.+.
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~   26 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGA   26 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            36788888888888888888888765


No 119
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=96.65  E-value=0.02  Score=43.63  Aligned_cols=50  Identities=16%  Similarity=0.130  Sum_probs=39.9

Q ss_pred             cHHHHHHHHhhcccccccccccc---cCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcC
Q 037085          135 LKQIVELLIRENSNRRIMIRINT---VNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQS  193 (248)
Q Consensus       135 ~~~~v~~Ll~~g~~~~~~~~~~~---~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~  193 (248)
                      +..+.++++.+|-     +++|.   +-+.|.|.|+-|+++    +..+++.+|+++||...
T Consensus       229 ~~kvL~~Fi~~Gl-----v~vN~~F~~~NSGdtMLDNA~Ky----~~~emi~~Llk~GA~~~  281 (284)
T PF06128_consen  229 SYKVLEYFINRGL-----VDVNKKFQKVNSGDTMLDNAMKY----KNSEMIAFLLKYGAISG  281 (284)
T ss_pred             cHHHHHHHHhccc-----cccchhhhccCCcchHHHhHHhc----CcHHHHHHHHHcCcccc
Confidence            6678888898886     56654   356789999999987    78899999999998543


No 120
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.18  E-value=0.0062  Score=51.42  Aligned_cols=63  Identities=17%  Similarity=0.127  Sum_probs=46.4

Q ss_pred             HHHHHHHHhcCcchhh-----hhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHH
Q 037085           29 ARMVRIFGENNRELCL-----EVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAV   92 (248)
Q Consensus        29 ~~~v~~Ll~~~~~~~~-----~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~   92 (248)
                      ...+.+|.+++.+.+.     ..+..-.|+||+|+.+|..+++.+||+.+ +++-.+|..|.||..++.
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg-~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEG-CDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhc-CCchhcccCCCCcccccc
Confidence            3456666666554421     12334668899999999999999999985 778888899999988876


No 121
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=95.62  E-value=0.39  Score=35.66  Aligned_cols=137  Identities=13%  Similarity=0.033  Sum_probs=90.4

Q ss_pred             CCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCC
Q 037085           17 ETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSR   96 (248)
Q Consensus        17 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~   96 (248)
                      +-.|..|++++...+++..-+....-    -...++-+-.||+..+.|+|+.+-+.-..      .+-.+-+.+|....+
T Consensus        47 ~CLl~HAVk~nmL~ILqkyke~L~~~----~~~~q~LFElAC~~qkydiV~WI~qnL~i------~~~~~iFdIA~~~kD  116 (192)
T PF03158_consen   47 WCLLYHAVKYNMLSILQKYKEDLENE----RYLNQELFELACEEQKYDIVKWIGQNLHI------YNPEDIFDIAFAKKD  116 (192)
T ss_pred             HHHHHHHHHcCcHHHHHHHHHHhhcc----hhHHHHHHHHHHHHccccHHHHHhhccCC------CCchhhhhhhhhccc
Confidence            34567788999888888775543221    12346778899999999999999554221      233456778888888


Q ss_pred             hHHHH----HHHHHHhccccccccccccCC----CCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHH
Q 037085           97 SDAFQ----ALVDEAKSHRKEHLFTWKDKE----GNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQL  168 (248)
Q Consensus        97 ~~~~~----~Ll~~~~~~~~~~~~~~~~~~----g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~  168 (248)
                      .++..    +++.+...        ..+.+    -..-|.+|+..|-...+.-.+++|.+      ++      .+.|..
T Consensus       117 lsLyslGY~l~~~~~~~--------~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~------~~------~~vls~  176 (192)
T PF03158_consen  117 LSLYSLGYKLLFNRMMS--------EHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGN------VD------IIVLSQ  176 (192)
T ss_pred             hhHHHHHHHHHHhhccc--------ccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCc------cc------HHHHHH
Confidence            77632    22222111        10000    11246899999999999999999872      22      288999


Q ss_pred             HHHcCCCchHHHHHHHHHH
Q 037085          169 CNANSQDSVFKEIGWIIQR  187 (248)
Q Consensus       169 a~~~~~~~~~~~i~~~L~~  187 (248)
                      |+..    .+..|+.++++
T Consensus       177 Av~y----nhRkIL~yfi~  191 (192)
T PF03158_consen  177 AVKY----NHRKILDYFIR  191 (192)
T ss_pred             HHHh----hHHHHHHHhhc
Confidence            9887    78888888764


No 122
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=94.62  E-value=0.14  Score=37.84  Aligned_cols=112  Identities=16%  Similarity=0.056  Sum_probs=75.1

Q ss_pred             cCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHH----HHHhCchhhhhhc--cCCCcH
Q 037085           14 QRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRA----LVSICPESLEKLT--SNGETA   87 (248)
Q Consensus        14 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~----Ll~~~~~~~~~~~--~~g~t~   87 (248)
                      ...++.+-.||+..+.++|+.+-+.-.-      .+-.+-+-+|....+.++...    ++.. .......|  .--..-
T Consensus        74 ~~~q~LFElAC~~qkydiV~WI~qnL~i------~~~~~iFdIA~~~kDlsLyslGY~l~~~~-~~~~~~~d~~~ll~~h  146 (192)
T PF03158_consen   74 YLNQELFELACEEQKYDIVKWIGQNLHI------YNPEDIFDIAFAKKDLSLYSLGYKLLFNR-MMSEHNEDPTSLLTQH  146 (192)
T ss_pred             hHHHHHHHHHHHHccccHHHHHhhccCC------CCchhhhhhhhhccchhHHHHHHHHHHhh-cccccccCHHHHHHHH
Confidence            4577888999999999999999443221      223466778888888776221    1221 11000000  001134


Q ss_pred             HHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHh
Q 037085           88 LHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIR  144 (248)
Q Consensus        88 lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~  144 (248)
                      |..|+..|-..++...+++|.+      ++      .++|..|+...+-.++.+++.
T Consensus       147 l~~a~~kgll~F~letlkygg~------~~------~~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  147 LEKAAAKGLLPFVLETLKYGGN------VD------IIVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHHCCCHHHHHHHHHcCCc------cc------HHHHHHHHHhhHHHHHHHhhc
Confidence            6789999999999888898876      22      279999999999999988764


No 123
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=94.42  E-value=0.095  Score=33.14  Aligned_cols=46  Identities=15%  Similarity=0.135  Sum_probs=25.1

Q ss_pred             HHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHh
Q 037085           19 TMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSI   72 (248)
Q Consensus        19 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~   72 (248)
                      .+..|+..|+.++++.+++.+...        ..++..|+...+-+++++|++.
T Consensus         9 tl~~Ai~GGN~eII~~c~~~~~~~--------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    9 TLEYAIIGGNFEIINICLKKNKPD--------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHhCCCHHHHHHHHHHhccH--------HHHHHHHHHHhhHHHHHHHHHh
Confidence            455566666666666665433111        2355666666666666666555


No 124
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=93.33  E-value=0.23  Score=31.32  Aligned_cols=48  Identities=17%  Similarity=0.275  Sum_probs=39.3

Q ss_pred             CcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHH
Q 037085           51 MIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDE  106 (248)
Q Consensus        51 ~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~  106 (248)
                      ...+..|+.+|+.|+++.+++.+..  .      ...+..|+...+-+++++|++.
T Consensus         7 ~~tl~~Ai~GGN~eII~~c~~~~~~--~------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    7 KKTLEYAIIGGNFEIINICLKKNKP--D------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHhcc--H------HHHHHHHHHHhhHHHHHHHHHh
Confidence            3568899999999999999976421  1      4578999999999999999876


No 125
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=91.61  E-value=0.81  Score=35.22  Aligned_cols=120  Identities=9%  Similarity=0.076  Sum_probs=83.1

Q ss_pred             CCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCch----hhhhhccCCCcHHHHHH
Q 037085           17 ETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPE----SLEKLTSNGETALHLAV   92 (248)
Q Consensus        17 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~----~~~~~~~~g~t~lh~a~   92 (248)
                      .-.|--|+..-+.+-+.-++....+.        .+++.+++..+..+++.+|+.....    ....  ..+.--+.++.
T Consensus       154 ~isledAV~AsN~~~i~~~VtdKkdA--------~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~--~~~~ydieY~L  223 (284)
T PF06128_consen  154 DISLEDAVKASNYEEISNLVTDKKDA--------HQAMWLSIGNAKEDVALYLLSKFNFTKQDVASM--EKELYDIEYLL  223 (284)
T ss_pred             cccHHHHHhhcCHHHHHHHhcchHHH--------HHHHHHHhcccHHHHHHHHHhhcceecchhhhc--CcchhhHHHHH
Confidence            34566788888888877777665544        4788999999999999999986431    1111  11222444443


Q ss_pred             H--cCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhccc
Q 037085           93 K--KSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSN  148 (248)
Q Consensus        93 ~--~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~  148 (248)
                      .  ..+..+.++++.+|--....  .=.+-+.|.|-|.-|...++.+++.+|+++|+.
T Consensus       224 S~h~a~~kvL~~Fi~~Glv~vN~--~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  224 SEHSASYKVLEYFINRGLVDVNK--KFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             hhcCCcHHHHHHHHhccccccch--hhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence            3  34577888998886432100  123568899999999999999999999999985


No 126
>PF04053 Coatomer_WDAD:  Coatomer WD associated region ;  InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits.  This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=59.55  E-value=34  Score=29.77  Aligned_cols=111  Identities=12%  Similarity=-0.017  Sum_probs=62.9

Q ss_pred             CCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhH
Q 037085           49 SLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLH  128 (248)
Q Consensus        49 ~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh  128 (248)
                      +..+-+.+|.+.|+.+.+..+.+.-.. ..    ....--..|...|+.++++.-..+..+             -...+.
T Consensus       320 D~~~rFeLAl~lg~L~~A~~~a~~~~~-~~----~W~~Lg~~AL~~g~~~lAe~c~~k~~d-------------~~~L~l  381 (443)
T PF04053_consen  320 DPDHRFELALQLGNLDIALEIAKELDD-PE----KWKQLGDEALRQGNIELAEECYQKAKD-------------FSGLLL  381 (443)
T ss_dssp             -HHHHHHHHHHCT-HHHHHHHCCCCST-HH----HHHHHHHHHHHTTBHHHHHHHHHHCT--------------HHHHHH
T ss_pred             ChHHHhHHHHhcCCHHHHHHHHHhcCc-HH----HHHHHHHHHHHcCCHHHHHHHHHhhcC-------------ccccHH
Confidence            334567788888888888777655321 11    112233467778889988887776443             122556


Q ss_pred             HHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhh
Q 037085          129 LATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVA  190 (248)
Q Consensus       129 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~  190 (248)
                      +....|+.+-++.|.+...          ...+-+.+++.+...+   ...+++++|.+.|-
T Consensus       382 Ly~~~g~~~~L~kl~~~a~----------~~~~~n~af~~~~~lg---d~~~cv~lL~~~~~  430 (443)
T PF04053_consen  382 LYSSTGDREKLSKLAKIAE----------ERGDINIAFQAALLLG---DVEECVDLLIETGR  430 (443)
T ss_dssp             HHHHCT-HHHHHHHHHHHH----------HTT-HHHHHHHHHHHT----HHHHHHHHHHTT-
T ss_pred             HHHHhCCHHHHHHHHHHHH----------HccCHHHHHHHHHHcC---CHHHHHHHHHHcCC
Confidence            7777788877777765322          1112234555555442   46678888887654


No 127
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=53.38  E-value=89  Score=29.73  Aligned_cols=58  Identities=9%  Similarity=-0.019  Sum_probs=37.6

Q ss_pred             cCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhc
Q 037085           47 DNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKS  109 (248)
Q Consensus        47 ~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~  109 (248)
                      -++..|-+-+|..+|+.++.-..-....+ .+.-..    .-..|...|+.+|++...++-.+
T Consensus       643 VkD~~tRF~LaLe~gnle~ale~akkldd-~d~w~r----Lge~Al~qgn~~IaEm~yQ~~kn  700 (1202)
T KOG0292|consen  643 VKDERTRFELALECGNLEVALEAAKKLDD-KDVWER----LGEEALRQGNHQIAEMCYQRTKN  700 (1202)
T ss_pred             ecCcchheeeehhcCCHHHHHHHHHhcCc-HHHHHH----HHHHHHHhcchHHHHHHHHHhhh
Confidence            34556777888999999888776665322 211111    22346678999999988877555


No 128
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=42.44  E-value=19  Score=27.30  Aligned_cols=51  Identities=18%  Similarity=0.197  Sum_probs=36.5

Q ss_pred             ccCCCCcHhHHHHhCCcHHHHH-HHHhhcccccccccccccCCCCCCHHHHHHH
Q 037085          119 KDKEGNTVLHLATLNKLKQIVE-LLIRENSNRRIMIRINTVNKQGQTALQLCNA  171 (248)
Q Consensus       119 ~~~~g~t~Lh~A~~~~~~~~v~-~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~  171 (248)
                      .|.+-..|||-|+..+..+++. ++++..+...+  -+|..|.+|-.+|++|.-
T Consensus       218 Id~kTe~~LHk~iki~REDVl~LYfie~dakiP~--~LNd~D~nG~~ALdiAL~  269 (280)
T KOG4591|consen  218 IDGKTENPLHKAIKIEREDVLFLYFIEMDAKIPG--ILNDADHNGALALDIALC  269 (280)
T ss_pred             HcCCCcchhHHhhhccccceeeehhhhccccccc--cccccCCCchHHHHHHHH
Confidence            3455566999999888888665 56666554332  477888999999988854


No 129
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=34.13  E-value=34  Score=26.60  Aligned_cols=43  Identities=12%  Similarity=0.017  Sum_probs=35.4

Q ss_pred             HHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCC
Q 037085          142 LIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSP  194 (248)
Q Consensus       142 Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~  194 (248)
                      |++.|+      -.|..|....|+=++|.+.    +.....+.|.+.|+....
T Consensus         1 lle~ga------~wn~id~~n~t~gd~a~er----n~~rly~~lv~~gv~Sel   43 (271)
T KOG1709|consen    1 LLEYGA------GWNFIDYENKTVGDLALER----NQSRLYRRLVEAGVPSEL   43 (271)
T ss_pred             CcccCC------CccccChhhCCchHHHHHc----cHHHHHHHHHHcCCchhh
Confidence            356676      6888999999999999987    678899999999987644


No 130
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=33.56  E-value=25  Score=26.74  Aligned_cols=54  Identities=22%  Similarity=0.337  Sum_probs=39.7

Q ss_pred             hccCCCcHHHHHHHcCChHHH-HHHHHHHhccccccccccccCCCCcHhHHHHhCCc
Q 037085           80 LTSNGETALHLAVKKSRSDAF-QALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKL  135 (248)
Q Consensus        80 ~~~~g~t~lh~a~~~~~~~~~-~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~  135 (248)
                      .|.+..+|||-|+.-++.+++ -++++..+.  .+.++|-.|-+|..+|.+|.....
T Consensus       218 Id~kTe~~LHk~iki~REDVl~LYfie~dak--iP~~LNd~D~nG~~ALdiAL~~~~  272 (280)
T KOG4591|consen  218 IDGKTENPLHKAIKIEREDVLFLYFIEMDAK--IPGILNDADHNGALALDIALCREL  272 (280)
T ss_pred             HcCCCcchhHHhhhccccceeeehhhhcccc--ccccccccCCCchHHHHHHHHHHH
Confidence            355667899999988888775 456665443  556688889999999998876543


No 131
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=29.70  E-value=19  Score=31.70  Aligned_cols=115  Identities=19%  Similarity=0.163  Sum_probs=59.6

Q ss_pred             hhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHH-----------hCCHHH-HHHHHHhCchhhh
Q 037085           11 IKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAAL-----------EGDSDV-IRALVSICPESLE   78 (248)
Q Consensus        11 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~-----------~g~~~~-~~~Ll~~~~~~~~   78 (248)
                      .....+.++.++++..|....++.....+..     +....++.++++.           .+..++ +.+.++..+....
T Consensus        50 ~~~s~~~~~~~l~~~~g~~~~~~~a~~fDv~-----~~g~~~~gl~~aml~a~~~~~~P~~~a~~~~~~~~~~~~~~ll~  124 (503)
T KOG0513|consen   50 QGVSLAYLELRLQNIDGDPSAARLADYFDVS-----IAGTNTGGLITAMLFAPNDCGRPRFGATDILWKFNLEKAPKLLE  124 (503)
T ss_pred             hhhhhcccHHHHHhccCChHhhHhhhccCce-----eeccCCchhhhhhhhccccccCccccccchhhhhhhcCCCcccc
Confidence            3455677788888888877655555333221     2222233222221           233344 4444444333222


Q ss_pred             hh------ccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcH
Q 037085           79 KL------TSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLK  136 (248)
Q Consensus        79 ~~------~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~  136 (248)
                      ..      .....++++........+.+..++.+...      ....+..|+|+||.+...++.
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~------~~~~~~~g~t~L~~tl~~~~~  182 (503)
T KOG0513|consen  125 KFDDPNFIKGDLNLALRILVSGDKYSGAEVLLTKYEI------ADAREVLGNTKLHLTLTKENL  182 (503)
T ss_pred             ccccccccccccccceeeeecCccccceeeccccccc------chhhhhcCCceeeeeccCCCc
Confidence            22      23456666766666666665555443222      344556777888877776555


No 132
>PF11995 DUF3490:  Domain of unknown function (DUF3490);  InterPro: IPR021881  This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 160 amino acids in length. This domain is found associated with PF00225 from PFAM. This domain is found associated with PF00225 from PFAM. This domain has two conserved sequence motifs: EVE and ESA. 
Probab=25.32  E-value=55  Score=23.82  Aligned_cols=59  Identities=15%  Similarity=0.136  Sum_probs=35.4

Q ss_pred             HHHHHHHHhhhhcCCCCCCCCCccccccccCCchhhhhhHHHHHHHH--------HHHHHHhhcCCC
Q 037085          180 EIGWIIQRAVAQQSPQLPDAGSANVSWNQTRWPIETRNVLLMVVVTI--------AAAFFTVTCNLP  238 (248)
Q Consensus       180 ~i~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li--------~~~~f~~~~~~p  238 (248)
                      +--++..+-|.+.+......+-...-|.....+.-.+++..+||-|+        ...+|+..|++|
T Consensus        95 ere~ly~kWgI~l~sK~RrlQL~~~LWt~~~d~~Hv~eSA~lVAkLvgf~e~g~~~KEMFgLnF~~~  161 (161)
T PF11995_consen   95 EREELYKKWGIPLDSKQRRLQLANRLWTDTKDMEHVRESAELVAKLVGFVEPGQASKEMFGLNFTPP  161 (161)
T ss_pred             HHHHHHHhcCCCCcchHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhhccccccHHHHHccCCCCC
Confidence            44444555555554443322222333666667777788899999776        345677777665


No 133
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=20.94  E-value=4.6e+02  Score=21.26  Aligned_cols=175  Identities=10%  Similarity=0.021  Sum_probs=0.0

Q ss_pred             hhccCCCCHHHHHHhCCCHHHHHHHHhcCc--chhhhhcCCCCcHHHHHHHhCCHHHHHHHHHh--CchhhhhhccCCCc
Q 037085           11 IKNQRGETTMHLLSTDGDARMVRIFGENNR--ELCLEVDNSLMIPLHRAALEGDSDVIRALVSI--CPESLEKLTSNGET   86 (248)
Q Consensus        11 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~--~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~--~~~~~~~~~~~g~t   86 (248)
                      ..|..|...+..+......+..+.+++.-.  -.....+..|...+.........+..+.+++.  .....-..|..|..
T Consensus       124 ~~d~~gn~Vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~G~~vvq~~l~~~~~~~~~~l~~~l~~~~~~L~~d~~Gn~  203 (322)
T cd07920         124 VKDQNGNHVIQKCIEKFPPEDLQFIIDAFKGNCVALSTHPYGCRVIQRCLEHCSEEQREPLLEEILEHALELVQDQFGNY  203 (322)
T ss_pred             hhcccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCchhh


Q ss_pred             HHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccc---cccccccCCCCC
Q 037085           87 ALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRI---MIRINTVNKQGQ  163 (248)
Q Consensus        87 ~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~---~~~~~~~~~~g~  163 (248)
                      .+..+...+..+..+.+++.-..   ...--..++.|.-.+..+...+..+.-+.+++.--....   .+.--+.|..|+
T Consensus       204 vvq~~l~~~~~~~~~~i~~~l~~---~~~~l~~~k~Gs~Vve~~l~~~~~~~~~~ii~~l~~~~~~~~~l~~l~~d~~Gn  280 (322)
T cd07920         204 VVQHVLELGDPDDTSRIIEKLLG---NIVQLSCHKFASNVVEKCLKHASKEERELIIDEILASGNETSALDTLMKDQYGN  280 (322)
T ss_pred             HHHHHHhcCCHHHHHHHHHHHHH---HHHHHHcCcchHHHHHHHHHHCCHHHHHHHHHHHhcCCCchhHHHHHhCCCccc


Q ss_pred             CHHHHHHHcCCCchHHHHHHHHHHh
Q 037085          164 TALQLCNANSQDSVFKEIGWIIQRA  188 (248)
Q Consensus       164 tpl~~a~~~~~~~~~~~i~~~L~~~  188 (248)
                      -.+..+...........++..|.++
T Consensus       281 ~Viq~~l~~~~~~~~~~i~~~l~~~  305 (322)
T cd07920         281 YVIQTALDVAKEEQRELLVEAIRPH  305 (322)
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHH


Done!