Query 037085
Match_columns 248
No_of_seqs 203 out of 4226
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 14:14:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037085.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037085hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 1.4E-36 4.9E-41 225.4 16.0 159 18-194 6-164 (169)
2 1yyh_A HN1;, notch 1, ankyrin 100.0 9.2E-36 3.2E-40 235.2 17.0 189 2-208 43-231 (253)
3 2f8y_A Notch homolog 1, transl 100.0 3.7E-35 1.3E-39 227.1 18.0 190 1-208 10-199 (223)
4 2dzn_A Probable 26S proteasome 100.0 1.8E-34 6.2E-39 223.9 17.9 192 2-209 22-217 (228)
5 1oy3_D Transcription factor in 100.0 6.9E-35 2.4E-39 233.0 15.8 182 9-208 38-266 (282)
6 3aji_A 26S proteasome non-ATPa 100.0 9.6E-35 3.3E-39 225.9 16.1 188 2-208 26-213 (231)
7 3hra_A Ankyrin repeat family p 100.0 2.7E-34 9.4E-39 218.8 14.9 185 13-210 2-188 (201)
8 2rfm_A Putative ankyrin repeat 100.0 3.5E-34 1.2E-38 216.9 14.2 167 6-190 25-191 (192)
9 3v31_A Ankyrin repeat family A 100.0 2E-33 6.8E-38 208.0 17.9 164 15-196 2-165 (167)
10 1ikn_D Protein (I-kappa-B-alph 100.0 3.3E-34 1.1E-38 223.8 13.8 176 8-200 37-218 (236)
11 2rfa_A Transient receptor pote 100.0 1.2E-33 4.2E-38 219.9 16.6 164 16-192 3-184 (232)
12 1k1a_A B-cell lymphoma 3-encod 100.0 1.3E-33 4.4E-38 220.7 16.8 185 6-208 36-224 (241)
13 3v30_A DNA-binding protein rfx 100.0 2.1E-33 7.2E-38 208.9 16.7 168 16-200 2-169 (172)
14 1oy3_D Transcription factor in 100.0 7.5E-34 2.6E-38 227.0 15.0 190 9-210 2-235 (282)
15 3b7b_A Euchromatic histone-lys 100.0 2.2E-33 7.5E-38 219.1 16.7 183 9-209 37-219 (237)
16 2rfa_A Transient receptor pote 100.0 7.7E-33 2.6E-37 215.4 19.5 179 3-198 24-229 (232)
17 1yyh_A HN1;, notch 1, ankyrin 100.0 5.5E-34 1.9E-38 225.0 11.6 182 9-208 3-198 (253)
18 3utm_A Tankyrase-1; tankyrase, 100.0 5.8E-33 2E-37 228.2 17.7 193 2-207 44-320 (351)
19 2xai_A ASB-9, ankyrin repeat a 100.0 5.5E-33 1.9E-37 220.3 16.6 180 8-208 28-207 (261)
20 4b93_B Ankyrin repeat domain-c 100.0 5E-34 1.7E-38 227.2 10.5 183 7-208 43-226 (269)
21 4b93_B Ankyrin repeat domain-c 100.0 1.5E-33 5E-38 224.5 13.1 170 6-192 76-245 (269)
22 1ikn_D Protein (I-kappa-B-alph 100.0 4.9E-34 1.7E-38 222.9 10.0 189 10-210 2-194 (236)
23 3f6q_A Integrin-linked protein 100.0 5.1E-33 1.7E-37 208.2 14.7 170 13-199 2-171 (179)
24 2f8y_A Notch homolog 1, transl 100.0 1E-32 3.6E-37 213.3 16.6 171 8-195 50-220 (223)
25 1k1a_A B-cell lymphoma 3-encod 100.0 1.4E-32 4.8E-37 214.8 17.4 186 8-208 1-191 (241)
26 2y1l_E Darpin-8.4; hydrolase-i 100.0 6.1E-33 2.1E-37 206.0 14.3 163 9-189 7-169 (169)
27 1ihb_A P18-INK4C(INK6), cyclin 100.0 3.3E-33 1.1E-37 205.7 12.7 160 14-191 3-162 (162)
28 2dzn_A Probable 26S proteasome 100.0 2.5E-32 8.4E-37 211.8 17.1 177 16-209 2-183 (228)
29 2xai_A ASB-9, ankyrin repeat a 100.0 2.1E-32 7.1E-37 216.9 16.0 173 15-208 2-174 (261)
30 3hra_A Ankyrin repeat family p 100.0 6.2E-32 2.1E-36 205.7 17.9 171 2-189 25-201 (201)
31 3b7b_A Euchromatic histone-lys 100.0 2.2E-32 7.4E-37 213.4 15.6 181 9-208 4-185 (237)
32 3d9h_A CDNA FLJ77766, highly s 100.0 3.1E-32 1E-36 218.7 16.8 176 12-208 88-263 (285)
33 3aji_A 26S proteasome non-ATPa 100.0 2E-32 6.9E-37 212.8 14.8 167 8-192 65-231 (231)
34 3kea_A K1L; tropism, ANK repea 100.0 1.5E-32 5.3E-37 220.5 14.1 177 9-207 24-202 (285)
35 2etb_A Transient receptor pote 100.0 2.7E-33 9.4E-38 221.2 9.5 167 12-195 39-250 (256)
36 3d9h_A CDNA FLJ77766, highly s 100.0 4E-32 1.4E-36 218.0 16.3 179 9-208 52-230 (285)
37 1s70_B 130 kDa myosin-binding 100.0 4.1E-32 1.4E-36 219.0 15.9 184 13-209 37-274 (299)
38 3ljn_A Hypothetical protein; a 100.0 1.3E-32 4.4E-37 228.1 13.3 184 10-208 47-252 (364)
39 2pnn_A Transient receptor pote 100.0 2.3E-32 7.8E-37 218.0 14.0 171 11-198 49-266 (273)
40 3twr_A Tankyrase-2; ankyrin re 100.0 7.2E-33 2.4E-37 204.7 9.6 162 11-190 3-164 (165)
41 4hbd_A KN motif and ankyrin re 100.0 3.4E-32 1.2E-36 217.5 14.0 165 8-189 103-273 (276)
42 1wdy_A 2-5A-dependent ribonucl 100.0 2E-31 6.9E-36 212.8 17.6 190 4-208 27-227 (285)
43 3jxi_A Vanilloid receptor-rela 100.0 2E-32 6.9E-37 216.6 11.5 168 13-197 43-256 (260)
44 2fo1_E LIN-12 protein; beta-ba 100.0 4.1E-32 1.4E-36 225.9 13.8 193 6-209 156-355 (373)
45 2etb_A Transient receptor pote 100.0 4.2E-32 1.4E-36 214.4 12.8 179 15-210 1-231 (256)
46 1n11_A Ankyrin; clathrin, BAND 100.0 1.5E-31 5.2E-36 226.7 16.8 180 10-208 206-385 (437)
47 1awc_B Protein (GA binding pro 100.0 1.3E-31 4.5E-36 195.5 13.4 151 16-185 2-152 (153)
48 1wdy_A 2-5A-dependent ribonucl 100.0 4.1E-31 1.4E-35 211.1 16.6 182 9-209 65-262 (285)
49 2pnn_A Transient receptor pote 100.0 5.7E-32 2E-36 215.6 11.4 202 8-228 5-255 (273)
50 1n11_A Ankyrin; clathrin, BAND 100.0 6.5E-31 2.2E-35 222.8 16.8 179 8-205 6-184 (437)
51 1sw6_A Regulatory protein SWI6 100.0 3.4E-31 1.2E-35 216.7 13.3 181 8-208 122-324 (327)
52 1bd8_A P19INK4D CDK4/6 inhibit 100.0 3.7E-31 1.3E-35 193.6 12.0 154 16-188 2-155 (156)
53 3kea_A K1L; tropism, ANK repea 100.0 4E-31 1.4E-35 212.2 13.0 162 15-196 61-225 (285)
54 3eu9_A Huntingtin-interacting 100.0 1.4E-30 4.9E-35 203.0 14.6 181 9-207 35-217 (240)
55 4gpm_A Engineered protein OR26 100.0 9.7E-31 3.3E-35 193.9 12.9 133 7-147 28-160 (169)
56 4g8k_A 2-5A-dependent ribonucl 100.0 3.6E-30 1.2E-34 211.2 14.8 186 13-206 22-245 (337)
57 3utm_A Tankyrase-1; tankyrase, 100.0 2.5E-30 8.6E-35 212.5 13.6 133 9-148 17-149 (351)
58 3ljn_A Hypothetical protein; a 100.0 7.2E-30 2.5E-34 211.5 16.1 168 13-193 81-271 (364)
59 3jxi_A Vanilloid receptor-rela 100.0 7.8E-31 2.7E-35 207.5 9.6 198 13-230 2-249 (260)
60 3eu9_A Huntingtin-interacting 100.0 5E-30 1.7E-34 199.9 13.9 183 10-208 3-185 (240)
61 1ycs_B 53BP2, P53BP2; ankyrin 100.0 8.3E-31 2.8E-35 205.1 9.0 166 13-195 2-168 (239)
62 4g8k_A 2-5A-dependent ribonucl 100.0 1.7E-29 5.8E-34 207.2 16.0 173 8-195 117-302 (337)
63 2fo1_E LIN-12 protein; beta-ba 100.0 3.4E-30 1.2E-34 214.4 11.8 167 8-192 191-372 (373)
64 1s70_B 130 kDa myosin-binding 100.0 8E-30 2.7E-34 205.5 13.3 149 9-171 66-274 (299)
65 3v30_A DNA-binding protein rfx 100.0 1.2E-29 4.1E-34 188.5 12.6 150 2-165 22-171 (172)
66 4hbd_A KN motif and ankyrin re 100.0 1.1E-29 3.9E-34 202.8 9.1 179 13-208 73-258 (276)
67 1bi7_B P16INK4A, MTS1, multipl 100.0 1.5E-29 5.2E-34 185.2 7.7 146 9-169 5-151 (156)
68 1d9s_A Cyclin-dependent kinase 100.0 8.7E-29 3E-33 177.0 10.7 130 44-191 6-136 (136)
69 3t8k_A Uncharacterized protein 100.0 4.6E-29 1.6E-33 187.8 8.6 161 16-195 6-183 (186)
70 2vge_A RELA-associated inhibit 100.0 6.3E-31 2.2E-35 204.5 -2.0 178 9-208 14-196 (229)
71 1d9s_A Cyclin-dependent kinase 100.0 8.8E-29 3E-33 177.0 8.9 130 9-147 5-135 (136)
72 2rfm_A Putative ankyrin repeat 100.0 9E-28 3.1E-32 181.6 12.7 147 44-208 29-175 (192)
73 3f6q_A Integrin-linked protein 99.9 6E-28 2.1E-32 180.6 10.3 147 2-162 25-171 (179)
74 2jab_A H10-2-G3; HER2, darpin, 99.9 1.6E-27 5.5E-32 170.4 10.6 130 9-146 7-136 (136)
75 1n0r_A 4ANK, 4 ankyrin repeats 99.9 6.1E-27 2.1E-31 164.6 13.3 125 15-147 1-125 (126)
76 1ihb_A P18-INK4C(INK6), cyclin 99.9 3.4E-27 1.1E-31 173.5 12.5 133 7-147 29-161 (162)
77 3twr_A Tankyrase-2; ankyrin re 99.9 3.4E-27 1.2E-31 174.0 11.8 146 46-208 4-149 (165)
78 3v31_A Ankyrin repeat family A 99.9 5.3E-27 1.8E-31 173.4 12.7 142 49-208 2-143 (167)
79 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.1E-26 3.8E-31 163.3 13.6 126 49-191 1-126 (126)
80 2y1l_E Darpin-8.4; hydrolase-i 99.9 7.9E-27 2.7E-31 172.9 12.9 131 8-146 39-169 (169)
81 2jab_A H10-2-G3; HER2, darpin, 99.9 8.4E-27 2.9E-31 166.7 11.0 127 46-189 10-136 (136)
82 1bi7_B P16INK4A, MTS1, multipl 99.9 1.6E-27 5.4E-32 174.4 7.3 140 44-201 6-146 (156)
83 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.8E-26 6.1E-31 168.6 11.1 130 6-145 26-155 (156)
84 2vge_A RELA-associated inhibit 99.9 6.3E-27 2.2E-31 181.9 9.2 150 32-198 1-155 (229)
85 3c5r_A BARD-1, BRCA1-associate 99.9 6.4E-27 2.2E-31 167.4 7.5 129 45-190 5-133 (137)
86 1awc_B Protein (GA binding pro 99.9 5.9E-26 2E-30 165.4 12.7 123 12-142 30-152 (153)
87 3ehr_A Osteoclast-stimulating 99.9 9.3E-27 3.2E-31 180.0 7.4 133 8-147 65-197 (222)
88 1sw6_A Regulatory protein SWI6 99.9 7.8E-27 2.7E-31 190.8 6.1 147 6-172 154-326 (327)
89 3c5r_A BARD-1, BRCA1-associate 99.9 1.4E-26 4.8E-31 165.6 6.5 129 11-147 5-133 (137)
90 3deo_A Signal recognition part 99.9 1.1E-25 3.7E-30 169.0 10.9 142 11-188 39-181 (183)
91 3ui2_A Signal recognition part 99.9 1.3E-25 4.6E-30 176.1 11.7 146 11-192 40-186 (244)
92 2aja_A Ankyrin repeat family p 99.9 3E-27 1E-31 196.0 1.0 161 10-194 86-253 (376)
93 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.3E-26 7.8E-31 179.9 5.7 152 13-172 34-191 (239)
94 3t8k_A Uncharacterized protein 99.9 9.7E-26 3.3E-30 169.6 6.7 126 14-147 36-178 (186)
95 3aaa_C Myotrophin, protein V-1 99.9 3E-25 1E-29 155.7 8.7 111 47-170 4-114 (123)
96 2b0o_E UPLC1; arfgap, structur 99.9 3.6E-25 1.2E-29 178.7 10.2 139 16-173 151-297 (301)
97 3ehr_A Osteoclast-stimulating 99.9 1.6E-25 5.5E-30 173.0 7.8 170 11-197 20-204 (222)
98 3aaa_C Myotrophin, protein V-1 99.9 3E-25 1E-29 155.8 7.7 114 13-134 4-117 (123)
99 1dcq_A PYK2-associated protein 99.9 1.6E-23 5.3E-28 167.3 15.6 168 12-195 62-267 (278)
100 3jue_A Arfgap with coiled-coil 99.9 2.8E-24 9.6E-29 177.6 11.5 150 12-172 195-347 (368)
101 3deo_A Signal recognition part 99.9 6.2E-25 2.1E-29 164.8 5.6 113 46-172 40-153 (183)
102 3ui2_A Signal recognition part 99.9 1.2E-25 4.1E-30 176.4 -1.1 141 14-172 13-154 (244)
103 2b0o_E UPLC1; arfgap, structur 99.9 1.2E-22 4E-27 164.0 13.4 134 51-208 152-294 (301)
104 3lvq_E ARF-GAP with SH3 domain 99.9 4.1E-23 1.4E-27 177.7 11.2 135 17-171 133-276 (497)
105 1dcq_A PYK2-associated protein 99.9 2.2E-22 7.5E-27 160.6 13.0 125 17-148 131-263 (278)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.7E-22 5.7E-27 134.6 9.5 91 50-147 2-92 (93)
107 3lvq_E ARF-GAP with SH3 domain 99.9 1.9E-22 6.5E-27 173.6 12.4 128 51-195 133-269 (497)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.5E-22 8.7E-27 133.7 9.9 92 15-108 1-92 (93)
109 2l6b_A NR1C; ankyrin, consensu 99.9 1.1E-22 3.8E-27 140.8 6.7 109 45-166 4-112 (115)
110 3jue_A Arfgap with coiled-coil 99.9 3.2E-22 1.1E-26 165.2 10.4 129 48-193 197-328 (368)
111 2aja_A Ankyrin repeat family p 99.9 4E-23 1.4E-27 171.2 4.9 154 16-191 65-224 (376)
112 2l6b_A NR1C; ankyrin, consensu 99.8 4.6E-22 1.6E-26 137.7 4.8 109 11-127 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 1.7E-19 5.7E-24 123.8 8.5 98 4-103 12-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 3.2E-19 1.1E-23 122.4 8.0 91 79-185 19-109 (110)
115 3mkq_B Coatomer subunit alpha; 42.7 88 0.003 22.4 6.5 106 17-146 9-116 (177)
116 3zrh_A Ubiquitin thioesterase 41.6 47 0.0016 27.4 5.3 26 82-107 67-92 (454)
117 1gp8_A Protein (scaffolding pr 40.3 26 0.0009 18.0 2.4 18 20-37 17-34 (40)
118 3zrh_A Ubiquitin thioesterase 35.5 82 0.0028 26.0 5.8 51 22-72 28-91 (454)
119 2jrw_A Cyclic extended PEP.1; 26.7 44 0.0015 14.8 1.7 15 234-248 4-18 (26)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.4e-36 Score=225.35 Aligned_cols=159 Identities=26% Similarity=0.377 Sum_probs=146.3
Q ss_pred CHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCCh
Q 037085 18 TTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRS 97 (248)
Q Consensus 18 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~ 97 (248)
+.|+.||..|+.++|+.|++.|+++ +.+|..|.||||+|+..++.+++++|++.+ .+++.+|..|.||||+|+..|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~~~~ll~~g-ad~~~~d~~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNAKDSDGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcc-cchhhhccCCCCHHHHHHHcCCH
Confidence 3699999999999999999999998 889999999999999999999999999984 56889999999999999999999
Q ss_pred HHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCch
Q 037085 98 DAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSV 177 (248)
Q Consensus 98 ~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~ 177 (248)
+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|+ +++.+|..|+|||++|+.. +
T Consensus 84 ~~v~~Ll~~gad------vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga------d~~~~d~~G~TpL~~A~~~----g 147 (169)
T 4gpm_A 84 EVVKLLISKGAD------VNAKDSDGRTPLHHAAENGHKEVVKLLISKGA------DVNTSDSDGRTPLDLAREH----G 147 (169)
T ss_dssp HHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHT----T
T ss_pred HHHHHHHHCcCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CccccCCCCCCHHHHHHHc----C
Confidence 999999999988 89999999999999999999999999999998 8999999999999999988 7
Q ss_pred HHHHHHHHHHhhhhcCC
Q 037085 178 FKEIGWIIQRAVAQQSP 194 (248)
Q Consensus 178 ~~~i~~~L~~~g~~~~~ 194 (248)
+.+++++|+++||++.-
T Consensus 148 ~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 148 NEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp CHHHHHHHHTC------
T ss_pred CHHHHHHHHHCCCCcCC
Confidence 89999999999998753
No 2
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=9.2e-36 Score=235.19 Aligned_cols=189 Identities=19% Similarity=0.177 Sum_probs=167.7
Q ss_pred cccCchhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhc
Q 037085 2 ARLWPQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLT 81 (248)
Q Consensus 2 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~ 81 (248)
++..++.....|..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++.++..++..+
T Consensus 43 l~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 121 (253)
T 1yyh_A 43 IYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARM 121 (253)
T ss_dssp ---------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCC
T ss_pred HHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC
Confidence 44555555667899999999999999999999999999998 78899999999999999999999999999776788899
Q ss_pred cCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCC
Q 037085 82 SNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQ 161 (248)
Q Consensus 82 ~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~ 161 (248)
..|.||||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|+ +++.+|..
T Consensus 122 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~ 189 (253)
T 1yyh_A 122 HDGTTPLILAARLAVEGMLEDLINSHAD------VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA------NKDMQNNR 189 (253)
T ss_dssp TTCCCHHHHHHHHTCSSHHHHHHHTTCC------TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC------CTTCCCTT
T ss_pred CCCCcHHHHHHHcChHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCCCcCCC
Confidence 9999999999999999999999999988 88999999999999999999999999999998 89999999
Q ss_pred CCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085 162 GQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 162 g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~ 208 (248)
|.||||+|+.. ++.+++++|+++|++++.....+.+ |++++.
T Consensus 190 g~tpL~~A~~~----~~~~~v~~Ll~~ga~~~~~d~~g~t-pl~~A~ 231 (253)
T 1yyh_A 190 EETPLFLAARE----GSYETAKVLLDHFANRDITDHMDRL-PRDIAQ 231 (253)
T ss_dssp SCCHHHHHHHH----TCHHHHHHHHHTTCCTTCCCTTCCC-HHHHHH
T ss_pred CCCHHHHHHHC----CCHHHHHHHHHcCCCccccccCCCC-HHHHHH
Confidence 99999999988 7889999999999999887766555 766554
No 3
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3.7e-35 Score=227.14 Aligned_cols=190 Identities=18% Similarity=0.179 Sum_probs=172.3
Q ss_pred CcccCchhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhh
Q 037085 1 MARLWPQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKL 80 (248)
Q Consensus 1 il~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~ 80 (248)
|++..++.....|..|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++.++..++..
T Consensus 10 Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~ 88 (223)
T 2f8y_A 10 FIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDAR 88 (223)
T ss_dssp TEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCC
T ss_pred HHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC
Confidence 345556666667899999999999999999999999999988 7889999999999999999999999999977678888
Q ss_pred ccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCC
Q 037085 81 TSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNK 160 (248)
Q Consensus 81 ~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~ 160 (248)
+..|.||||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+++|+ +++.+|.
T Consensus 89 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~ 156 (223)
T 2f8y_A 89 MHDGTTPLILAARLAVEGMLEDLINSHAD------VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA------NKDMQNN 156 (223)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCC------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC------CTTCCCT
T ss_pred CCCCCcHHHHHHHhCcHHHHHHHHHcCCC------CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCC------CCCCcCC
Confidence 99999999999999999999999999888 88899999999999999999999999999997 8999999
Q ss_pred CCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085 161 QGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 161 ~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~ 208 (248)
.|.||||+|+.. ++.+++++|+++|++++.....+.+ |++.+.
T Consensus 157 ~g~t~L~~A~~~----~~~~~v~~Ll~~ga~~~~~~~~g~t-~l~~A~ 199 (223)
T 2f8y_A 157 REETPLFLAARE----GSYETAKVLLDHFANRDITDHMDRL-PRDIAQ 199 (223)
T ss_dssp TCCCHHHHHHHH----TCHHHHHHHHHTTCCTTCCCTTCCC-HHHHHH
T ss_pred CCcCHHHHHHHc----CCHHHHHHHHHcCCCCccccccCCC-HHHHHH
Confidence 999999999988 7889999999999998877665544 666554
No 4
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.8e-34 Score=223.85 Aligned_cols=192 Identities=24% Similarity=0.198 Sum_probs=171.4
Q ss_pred cccCchhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcC--cchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhC-chhhh
Q 037085 2 ARLWPQLASIKNQRGETTMHLLSTDGDARMVRIFGENN--RELCLEVDNSLMIPLHRAALEGDSDVIRALVSIC-PESLE 78 (248)
Q Consensus 2 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~-~~~~~ 78 (248)
|+..+......|..|.||||+|+..|+.+++++|++.+ .+.....+..|.||||+|+..|+.+++++|++.+ ...++
T Consensus 22 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 101 (228)
T 2dzn_A 22 LHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLN 101 (228)
T ss_dssp HHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTT
T ss_pred HhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccc
Confidence 45566666778999999999999999999999999999 5553337889999999999999999999999985 25678
Q ss_pred hhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhccccccccccccc
Q 037085 79 KLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTV 158 (248)
Q Consensus 79 ~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~ 158 (248)
..+..|.||||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.|. .+++.+
T Consensus 102 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~ 170 (228)
T 2dzn_A 102 KITNQGVTCLHLAVGKKWFEVSQFLIENGAS------VRIKDKFNQIPLHRAASVGSLKLIELLCGLGK-----SAVNWQ 170 (228)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------SCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTC-----CCSCCC
T ss_pred cCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC------ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCc-----ccccCc
Confidence 8899999999999999999999999999888 88999999999999999999999999999993 289999
Q ss_pred CCCCCCHHHHHHHcCCCchHHHHHHHHH-HhhhhcCCCCCCCCCcccccccc
Q 037085 159 NKQGQTALQLCNANSQDSVFKEIGWIIQ-RAVAQQSPQLPDAGSANVSWNQT 209 (248)
Q Consensus 159 ~~~g~tpl~~a~~~~~~~~~~~i~~~L~-~~g~~~~~~~~~~~~~~~~~~~~ 209 (248)
|..|+||||+|+.. ++.+++++|+ ++|++++.....+.+ |++++..
T Consensus 171 d~~g~t~L~~A~~~----~~~~~v~~Ll~~~ga~~~~~~~~g~t-~l~~A~~ 217 (228)
T 2dzn_A 171 DKQGWTPLFHALAE----GHGDAAVLLVEKYGAEYDLVDNKGAK-AEDVALN 217 (228)
T ss_dssp CTTSCCHHHHHHHT----TCHHHHHHHHHHHCCCSCCBCTTSCB-GGGGCSS
T ss_pred CCCCCCHHHHHHHc----CCHHHHHHHHHhcCCCCCccCCCCCc-HHHHHHH
Confidence 99999999999988 7889999999 999999988876665 8877653
No 5
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=6.9e-35 Score=233.00 Aligned_cols=182 Identities=22% Similarity=0.231 Sum_probs=128.1
Q ss_pred HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCch-------------
Q 037085 9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPE------------- 75 (248)
Q Consensus 9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~------------- 75 (248)
++..|..|.||||+|+..|+.+++++|+++++++ +.++..|.||||+|+..|+.+++++|++.++.
T Consensus 38 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (282)
T 1oy3_D 38 LDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQS 116 (282)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC--------
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcc
Confidence 5566677777777777777777777777777766 56677777777777777777777777765322
Q ss_pred ---------------------------------hhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccC-
Q 037085 76 ---------------------------------SLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDK- 121 (248)
Q Consensus 76 ---------------------------------~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~- 121 (248)
.++.++..|.||||+|+..|+.+++++|+++|++ ++..+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------~~~~~~~ 190 (282)
T 1oy3_D 117 QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD------LNKPEPT 190 (282)
T ss_dssp ---------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC------TTCCCTT
T ss_pred cccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC------CCCCCCC
Confidence 2445566778888888888888888888887777 666664
Q ss_pred CCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCC
Q 037085 122 EGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGS 201 (248)
Q Consensus 122 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~ 201 (248)
.|.||||+|+..|+.+++++|+++|+ +++.+|..|+||||+|+.. ++.+++++|+++|++++.+...+.+
T Consensus 191 ~g~tpL~~A~~~~~~~~v~~Ll~~ga------d~~~~d~~g~tpL~~A~~~----~~~~~v~~Ll~~ga~~~~~~~~g~t 260 (282)
T 1oy3_D 191 CGRTPLHLAVEAQAASVLELLLKAGA------DPTARMYGGRTPLGSALLR----PNPILARLLRAHGAPEPEDGGDKLS 260 (282)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHTS----SCHHHHHHHHHTTCCCCCCC-----
T ss_pred CCcCHHHHHHHcCCHHHHHHHHHcCC------CCcccccCCCCHHHHHHHc----CCcHHHHHHHHcCCCcCcCCCcccc
Confidence 48888888888888888888888876 7788888888888888776 6778888888888887776666554
Q ss_pred ccccccc
Q 037085 202 ANVSWNQ 208 (248)
Q Consensus 202 ~~~~~~~ 208 (248)
|++++.
T Consensus 261 -pl~~a~ 266 (282)
T 1oy3_D 261 -PCSSSG 266 (282)
T ss_dssp -------
T ss_pred -cccccC
Confidence 665443
No 6
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=9.6e-35 Score=225.95 Aligned_cols=188 Identities=21% Similarity=0.237 Sum_probs=171.3
Q ss_pred cccCchhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhc
Q 037085 2 ARLWPQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLT 81 (248)
Q Consensus 2 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~ 81 (248)
++..+...+..+..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++.+ ..++.++
T Consensus 26 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~ 103 (231)
T 3aji_A 26 ILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAASAGXDEIVKALLVKG-AHVNAVN 103 (231)
T ss_dssp HHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCC
T ss_pred HHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHHcCHHHHHHHHHHcC-CCCCCCC
Confidence 44566777888999999999999999999999999999987 778999999999999999999999999984 4578889
Q ss_pred cCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCC
Q 037085 82 SNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQ 161 (248)
Q Consensus 82 ~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~ 161 (248)
..|.||||+|+..++.+++++|+++|.+ ++.++..|.||||+|+..|+.+++++|+++|+ +++.+|..
T Consensus 104 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~ 171 (231)
T 3aji_A 104 QNGCTPLHYAASKNRHEIAVMLLEGGAN------PDAKDHYDATAMHRAAAKGNLKMVHILLFYKA------STNIQDTE 171 (231)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC------CSCCCCTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCC------CccccCCC
Confidence 9999999999999999999999999888 88899999999999999999999999999997 89999999
Q ss_pred CCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085 162 GQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 162 g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~ 208 (248)
|.||||+|+.. ++.+++++|+++|++++.....+.+ |++.+.
T Consensus 172 g~t~L~~A~~~----~~~~~v~~Ll~~ga~~~~~~~~g~t-~l~~A~ 213 (231)
T 3aji_A 172 GNTPLHLACDE----ERVEEAKFLVTQGASIYIENKEEKT-PLQVAK 213 (231)
T ss_dssp SCCHHHHHHHT----TCHHHHHHHHHTTCCSCCCCTTSCC-HHHHSC
T ss_pred CCCHHHHHHHC----CCHHHHHHHHHCCCCCCCCCCCCCC-HHHHHH
Confidence 99999999988 7899999999999999877766555 776553
No 7
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.7e-34 Score=218.76 Aligned_cols=185 Identities=17% Similarity=0.191 Sum_probs=148.1
Q ss_pred ccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHH
Q 037085 13 NQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAV 92 (248)
Q Consensus 13 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~ 92 (248)
+..+.||||.|+..|+.+.++.|++.+....+..+..|.||||+|+..|+.+++++|++. +.+++.++..|.||||+|+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~ 80 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDR-GADINLQNSISDSPYLYAG 80 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHH
Confidence 456888899999999888888888888744477888888999999988899999988887 4457778888889999988
Q ss_pred HcCChHHHHHHHHHHh-ccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHH
Q 037085 93 KKSRSDAFQALVDEAK-SHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNA 171 (248)
Q Consensus 93 ~~~~~~~~~~Ll~~~~-~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~ 171 (248)
..++.+++++|++.+. + ++..+..|.||||+|+..++.+++++|+++|. .+++.+|..|+||||+|+.
T Consensus 81 ~~~~~~~~~~Ll~~~~~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~~g~t~L~~A~~ 149 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPD------LNKHNRYGGNALIPAAEKGHIDNVKLLLEDGR-----EDIDFQNDFGYTALIEAVG 149 (201)
T ss_dssp HTTCHHHHHHHHHHSCCC------TTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCC-----CCTTCCCTTSCCHHHHHHH
T ss_pred HcCCHHHHHHHHhccCcc------cccccCCCCcHHHHHHHcCCHHHHHHHHHcCC-----CCcCCCCCCCCCHHHHHHH
Confidence 8888888888885543 3 77788888899999998888899998888883 2788888888899998887
Q ss_pred cCC-CchHHHHHHHHHHhhhhcCCCCCCCCCccccccccC
Q 037085 172 NSQ-DSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQTR 210 (248)
Q Consensus 172 ~~~-~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 210 (248)
.+. ...+.+++++|+++|++++.....+.+ |++++...
T Consensus 150 ~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t-~l~~A~~~ 188 (201)
T 3hra_A 150 LREGNQLYQDIVKLLMENGADQSIKDNSGRT-AMDYANQK 188 (201)
T ss_dssp SSCCSHHHHHHHHHHHHTTCCTTCCCTTSCC-HHHHHHHH
T ss_pred hccchhhHHHHHHHHHHCCCCCCccCCCCCC-HHHHHHHc
Confidence 754 334588888888888888887766555 77765543
No 8
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=3.5e-34 Score=216.91 Aligned_cols=167 Identities=18% Similarity=0.122 Sum_probs=155.9
Q ss_pred chhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCC
Q 037085 6 PQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGE 85 (248)
Q Consensus 6 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~ 85 (248)
+.+.+.+|..|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++.+ ..++.+|..|.
T Consensus 25 ~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~ 102 (192)
T 2rfm_A 25 DFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSKG-SNVNTKDFSGK 102 (192)
T ss_dssp HHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTSC
T ss_pred HHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCC
Confidence 3456678999999999999999999999999999887 788999999999999999999999999995 45788899999
Q ss_pred cHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCH
Q 037085 86 TALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTA 165 (248)
Q Consensus 86 t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tp 165 (248)
||||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|+ +++.+|..|.||
T Consensus 103 t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~g~t~ 170 (192)
T 2rfm_A 103 TPLMWSIIFGYSEMSYFLLEHGAN------VNDRNLEGETPLIVASKYGRSEIVKKLLELGA------DISARDLTGLTA 170 (192)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC------SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC------CTTCBCTTSCBH
T ss_pred cHHHHHHHcCCHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC------CCCCcCCCCCCH
Confidence 999999999999999999999988 88999999999999999999999999999998 899999999999
Q ss_pred HHHHHHcCCCchHHHHHHHHHHhhh
Q 037085 166 LQLCNANSQDSVFKEIGWIIQRAVA 190 (248)
Q Consensus 166 l~~a~~~~~~~~~~~i~~~L~~~g~ 190 (248)
+++|+.. ++.+++++|+++|.
T Consensus 171 l~~A~~~----~~~~~v~~Ll~~~~ 191 (192)
T 2rfm_A 171 EASARIF----GRQEVIKIFTEVRR 191 (192)
T ss_dssp HHHHHHT----TCHHHHHHHHHHHH
T ss_pred HHHHHHh----CcHHHHHHHHhccC
Confidence 9999988 78999999998863
No 9
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=2e-33 Score=208.05 Aligned_cols=164 Identities=20% Similarity=0.242 Sum_probs=154.3
Q ss_pred CCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHc
Q 037085 15 RGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKK 94 (248)
Q Consensus 15 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~ 94 (248)
.|.||||.|+..|+.++++.|++.+.++ +.+|..|.||||+|+..|+.+++++|++. +..++..+..|.||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQN-GADPQLLGKGRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHc
Confidence 6899999999999999999999999887 78899999999999999999999999998 456788899999999999999
Q ss_pred CChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCC
Q 037085 95 SRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQ 174 (248)
Q Consensus 95 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~ 174 (248)
++.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+++|+ +++.+|..|.||+++|+..
T Consensus 80 ~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~l~~A~~~-- 145 (167)
T 3v31_A 80 GYTDIVKMLLDCGVD------VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA------DPTIETDSGYNSMDLAVAL-- 145 (167)
T ss_dssp TCHHHHHHHHHHTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHH--
T ss_pred CCHHHHHHHHHCCCC------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCCCcCCCCCCHHHHHHHc--
Confidence 999999999999988 88999999999999999999999999999998 8899999999999999988
Q ss_pred CchHHHHHHHHHHhhhhcCCCC
Q 037085 175 DSVFKEIGWIIQRAVAQQSPQL 196 (248)
Q Consensus 175 ~~~~~~i~~~L~~~g~~~~~~~ 196 (248)
++.+++++|++++++.....
T Consensus 146 --~~~~~~~~L~~~~~~~~~~~ 165 (167)
T 3v31_A 146 --GYRSVQQVIESHLLKLLQNI 165 (167)
T ss_dssp --TCHHHHHHHHHHHHHHCSSC
T ss_pred --CcHHHHHHHHHHHHHHHHHh
Confidence 78999999999999877654
No 10
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=3.3e-34 Score=223.85 Aligned_cols=176 Identities=23% Similarity=0.260 Sum_probs=159.0
Q ss_pred hHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCch-----hhhhhcc
Q 037085 8 LASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPE-----SLEKLTS 82 (248)
Q Consensus 8 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~-----~~~~~~~ 82 (248)
.++..|..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++.+.. ..+..+.
T Consensus 37 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 115 (236)
T 1ikn_D 37 FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNY 115 (236)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCT
T ss_pred HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCC
Confidence 46778899999999999999999999999999988 77899999999999999999999999998642 2567788
Q ss_pred CCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccC-CCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCC
Q 037085 83 NGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDK-EGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQ 161 (248)
Q Consensus 83 ~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~-~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~ 161 (248)
.|.||||+|+..|+.+++++|+++|++ ++.++. .|.||||+|+..|+.+++++|+++|+ +++.+|..
T Consensus 116 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~ 183 (236)
T 1ikn_D 116 NGHTCLHLASIHGYLGIVELLVSLGAD------VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA------DVNRVTYQ 183 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHTCC------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTC------CSCCCCTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCCcccCC
Confidence 899999999999999999999999988 888887 99999999999999999999999998 89999999
Q ss_pred CCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCC
Q 037085 162 GQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAG 200 (248)
Q Consensus 162 g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~ 200 (248)
|.|||++|+.. ++.+++++|+++|++.....++..
T Consensus 184 g~tpl~~A~~~----~~~~~~~~Ll~~ga~~~~~~~~~~ 218 (236)
T 1ikn_D 184 GYSPYQLTWGR----PSTRIQQQLGQLTLENLQMLPESE 218 (236)
T ss_dssp CCCGGGGCTTS----SCHHHHHHHHTTSCGGGSSCCCCC
T ss_pred CCCHHHHHHcc----CchHHHHHHHHcchhhhhcCCccc
Confidence 99999999877 789999999999998876555543
No 11
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.2e-33 Score=219.92 Aligned_cols=164 Identities=21% Similarity=0.226 Sum_probs=75.9
Q ss_pred CCCHHHHHHhCCCHHHHHHHHhc-CcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhh----hhhccCCCcHHHH
Q 037085 16 GETTMHLLSTDGDARMVRIFGEN-NRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESL----EKLTSNGETALHL 90 (248)
Q Consensus 16 g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~----~~~~~~g~t~lh~ 90 (248)
|+||||+|+..|+.++++.|++. +.++ +.+|..|.||||+|+..|+.+++++|++.+++.. +..|..|.||||+
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEV-HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCc-ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 44455555555555555444444 3333 4444444455555554455555555444433211 2233344455555
Q ss_pred HHHcCChHHHHHHHHHHhcccccccccccc-------------CCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccc
Q 037085 91 AVKKSRSDAFQALVDEAKSHRKEHLFTWKD-------------KEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINT 157 (248)
Q Consensus 91 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~-------------~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 157 (248)
|+..|+.+++++|+++|++ ++..+ ..|.||||+|+..|+.+++++|+++|+ +++.
T Consensus 82 A~~~~~~~~v~~Ll~~g~~------~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga------~~~~ 149 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGAS------VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGA------DIRA 149 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCC------TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTC------CTTC
T ss_pred HHHcCCHHHHHHHHhCCCC------CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCC------CCCC
Confidence 5444444555544444444 22222 244455555554444455555444444 4444
Q ss_pred cCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhc
Q 037085 158 VNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQ 192 (248)
Q Consensus 158 ~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~ 192 (248)
+|..|+||||+|+..+......+++++|+++|++.
T Consensus 150 ~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 150 QDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp CCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred CCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCch
Confidence 44444555555444444444444444444444444
No 12
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.3e-33 Score=220.74 Aligned_cols=185 Identities=22% Similarity=0.238 Sum_probs=148.4
Q ss_pred chhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCch---hhhhhcc
Q 037085 6 PQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPE---SLEKLTS 82 (248)
Q Consensus 6 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~---~~~~~~~ 82 (248)
+..++..|..|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++.++. .++..+.
T Consensus 36 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 114 (241)
T 1k1a_A 36 GRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNY 114 (241)
T ss_dssp TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCT
T ss_pred CCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCc
Confidence 3345566777888888888888888888888888776 66777888888888888888888888887542 4566777
Q ss_pred CCCcHHHHHHHcCChHHHHHHHHHHhcccccccccccc-CCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCC
Q 037085 83 NGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKD-KEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQ 161 (248)
Q Consensus 83 ~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~ 161 (248)
.|.||||+|+..++.+++++|+++|++ ++..+ ..|.||||+|+..++.+++++|+++|+ +++.+|..
T Consensus 115 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~ 182 (241)
T 1k1a_A 115 DGLTALHVAVNTECQETVQLLLERGAD------IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGA------NVNAQMYS 182 (241)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC------CTTCBCTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC------cccccccCCCcHHHHHHHcCCHHHHHHHHHcCC------CCCCcCCC
Confidence 888888888888888888888888777 66677 788999999999999999999999887 78888999
Q ss_pred CCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085 162 GQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 162 g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~ 208 (248)
|.||||+|+.. ++.+++++|+++|++++.+...+.+ |++++.
T Consensus 183 g~t~L~~A~~~----~~~~~v~~Ll~~ga~~~~~~~~g~t-pl~~A~ 224 (241)
T 1k1a_A 183 GSSALHSASGR----GLLPLVRTLVRSGADSSLKNCHNDT-PLMVAR 224 (241)
T ss_dssp SCBHHHHHHHH----TCHHHHHHHHHTTCCTTCCCTTSCC-TTTTCS
T ss_pred CCCHHHHHHHc----CCHHHHHHHHhcCCCCCCcCCCCCC-HHHHHH
Confidence 99999999887 6788999999999998877765554 776654
No 13
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=2.1e-33 Score=208.91 Aligned_cols=168 Identities=20% Similarity=0.233 Sum_probs=152.9
Q ss_pred CCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcC
Q 037085 16 GETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKS 95 (248)
Q Consensus 16 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~ 95 (248)
+.||||.|+..|+.++++.|++.+....+.++..|.||||+|+..|+.+++++|++.+ .+++.++..|.||||+|+..+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWG-ADPHILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCchhhcccCCCHHHHHHHCC
Confidence 5789999999999999999999999866889999999999999999999999999985 558888999999999999999
Q ss_pred ChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCC
Q 037085 96 RSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQD 175 (248)
Q Consensus 96 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~ 175 (248)
+.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+++|+ +++.+|..|.|||++|+..
T Consensus 81 ~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~g~t~l~~A~~~--- 145 (172)
T 3v30_A 81 YTDIVGLLLERDVD------INIYDWNGGTPLLYAVRGNHVKCVEALLARGA------DLTTEADSGYTPMDLAVAL--- 145 (172)
T ss_dssp CHHHHHHHHTTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHH---
T ss_pred CHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CccccCCCCCCHHHHHHHh---
Confidence 99999999999888 88999999999999999999999999999998 8999999999999999988
Q ss_pred chHHHHHHHHHHhhhhcCCCCCCCC
Q 037085 176 SVFKEIGWIIQRAVAQQSPQLPDAG 200 (248)
Q Consensus 176 ~~~~~i~~~L~~~g~~~~~~~~~~~ 200 (248)
++.+++++|+++|++.......+.
T Consensus 146 -~~~~~~~~L~~~~~~~~~~~~~~~ 169 (172)
T 3v30_A 146 -GYRKVQQVIENHILKLFQSNLVPA 169 (172)
T ss_dssp -TCHHHHHHHHHHHHHHSCC-----
T ss_pred -CcHHHHHHHHHHHHHHhcccCCCC
Confidence 789999999999999887665443
No 14
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=7.5e-34 Score=227.00 Aligned_cols=190 Identities=19% Similarity=0.219 Sum_probs=165.7
Q ss_pred HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcch--hhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCc
Q 037085 9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNREL--CLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGET 86 (248)
Q Consensus 9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~--~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t 86 (248)
++..|.+|+||||+|+..|+.+++++|++.+... .+.++..|.||||+|+..|+.+++++|++.+ ..++.++..|.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG-AGVLVAERGGHT 80 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCSSCCCTTSCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCC
Confidence 4568999999999999999999999999988762 3778999999999999999999999999984 558888999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHhccc-----------------------------------------cccccccccCCCCc
Q 037085 87 ALHLAVKKSRSDAFQALVDEAKSHR-----------------------------------------KEHLFTWKDKEGNT 125 (248)
Q Consensus 87 ~lh~a~~~~~~~~~~~Ll~~~~~~~-----------------------------------------~~~~~~~~~~~g~t 125 (248)
|||+|+..++.+++++|+++++... ....++.++..|.|
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 160 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT 160 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCC
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcC
Confidence 9999999999999999998664321 11236778999999
Q ss_pred HhHHHHhCCcHHHHHHHHhhcccccccccccccCCC-CCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccc
Q 037085 126 VLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQ-GQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANV 204 (248)
Q Consensus 126 ~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~-g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~ 204 (248)
|||+|+..|+.+++++|+++|+ +++..+.. |+||||+|+.. ++.+++++|+++|++++.+...+.+ |+
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~~g~------~~~~~~~~~g~tpL~~A~~~----~~~~~v~~Ll~~gad~~~~d~~g~t-pL 229 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRDAGA------DLNKPEPTCGRTPLHLAVEA----QAASVLELLLKAGADPTARMYGGRT-PL 229 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTC------CTTCCCTTTCCCHHHHHHHT----TCHHHHHHHHHTTCCTTCCCTTSCC-HH
T ss_pred HHHHHHHcCCHHHHHHHHHcCC------CCCCCCCCCCcCHHHHHHHc----CCHHHHHHHHHcCCCCcccccCCCC-HH
Confidence 9999999999999999999998 78888864 99999999988 7899999999999999988766655 88
Q ss_pred cccccC
Q 037085 205 SWNQTR 210 (248)
Q Consensus 205 ~~~~~~ 210 (248)
+++...
T Consensus 230 ~~A~~~ 235 (282)
T 1oy3_D 230 GSALLR 235 (282)
T ss_dssp HHHHTS
T ss_pred HHHHHc
Confidence 766543
No 15
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.2e-33 Score=219.10 Aligned_cols=183 Identities=16% Similarity=0.176 Sum_probs=156.0
Q ss_pred HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHH
Q 037085 9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETAL 88 (248)
Q Consensus 9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l 88 (248)
++..+..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++.++..++..+..|.|||
T Consensus 37 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L 115 (237)
T 3b7b_A 37 IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPM 115 (237)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHH
T ss_pred cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHH
Confidence 4556778888888888888888888888888877 667888888888888888888888888886667778888899999
Q ss_pred HHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHH
Q 037085 89 HLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQL 168 (248)
Q Consensus 89 h~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~ 168 (248)
|+|+..++.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|+ +++.+|..|.||||+
T Consensus 116 ~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~------~~~~~~~~g~t~L~~ 183 (237)
T 3b7b_A 116 IWATEYKHVDLVKLLLSKGSD------INIRDNEENICLHWAAFSGCVDIAEILLAAKC------DLHAVNIHGDSPLHI 183 (237)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTC------CTTCCCTTCCCHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCC------CCccCCCCCCHHHHHHHCCCHHHHHHHHHcCC------CCCCcCCCCCCHHHH
Confidence 999999999999999988877 78888999999999999999999999999987 788899999999999
Q ss_pred HHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccccccc
Q 037085 169 CNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQT 209 (248)
Q Consensus 169 a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 209 (248)
|+.. +..+++++|+++|++++.....+.+ |++++..
T Consensus 184 A~~~----~~~~~v~~Ll~~gad~~~~d~~g~t-~l~~A~~ 219 (237)
T 3b7b_A 184 AARE----NRYDCVVLFLSRDSDVTLKNKEGET-PLQCASL 219 (237)
T ss_dssp HHHT----TCHHHHHHHHTTTCCTTCCCTTSCC-HHHHSCT
T ss_pred HHHh----CCHhHHHHHHHcCCCCCccCCCCCC-HHHHHHH
Confidence 9987 6789999999999998887766555 7776654
No 16
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=7.7e-33 Score=215.39 Aligned_cols=179 Identities=19% Similarity=0.174 Sum_probs=152.1
Q ss_pred ccCchhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchh----hhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhh
Q 037085 3 RLWPQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELC----LEVDNSLMIPLHRAALEGDSDVIRALVSICPESLE 78 (248)
Q Consensus 3 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~----~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~ 78 (248)
+..+..++..|..|.||||+|+..|+.+++++|++.+++.. ...|..|.||||+|+..|+.+++++|++.+ .+++
T Consensus 24 ~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~ 102 (232)
T 2rfa_A 24 KFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARG-ASVS 102 (232)
T ss_dssp TTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCTT
T ss_pred HhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCC-CCCC
Confidence 34456677889999999999999999999999999998763 345678999999999999999999999985 4566
Q ss_pred hhcc-------------CCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHH----HH
Q 037085 79 KLTS-------------NGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIV----EL 141 (248)
Q Consensus 79 ~~~~-------------~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v----~~ 141 (248)
..+. .|.||||+|+..|+.+++++|+++| ..++.+|..|.||||+|+..++.+++ ++
T Consensus 103 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g------a~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~ 176 (232)
T 2rfa_A 103 ARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG------ADIRAQDSLGNTVLHILILQPNKTFACQMYNL 176 (232)
T ss_dssp CCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT------CCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHH
T ss_pred cccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC------CCCCCCCCCCCCHHHHHHHcCChHHHHHHHHH
Confidence 6665 6999999999999999999999874 57788999999999999999999988 99
Q ss_pred HHhhcccccccccc------cccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCC
Q 037085 142 LIRENSNRRIMIRI------NTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPD 198 (248)
Q Consensus 142 Ll~~g~~~~~~~~~------~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~ 198 (248)
|+++|+ +. +.+|..|+||| ..+...++.+++++|+++|+......+.
T Consensus 177 Ll~~g~------~~~~~~~~~~~~~~g~tpl----~~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 229 (232)
T 2rfa_A 177 LLSYDG------GDHLKSLELVPNNQGLTPF----KLAGVEGNIVMFQHLMQKRKHIAAAHHH 229 (232)
T ss_dssp HHHTTC------SCSSCCGGGCCCTTSCCHH----HHHHHHTCHHHHHHHHHHHHHC------
T ss_pred HHhcCC------chhhhhhhccCCCCCCCHH----HHHHHcCCHHHHHHHHhcCccchhhhcc
Confidence 999998 45 68999999995 5556677889999999999998776543
No 17
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=5.5e-34 Score=224.99 Aligned_cols=182 Identities=21% Similarity=0.250 Sum_probs=133.4
Q ss_pred HhhhccCCCCHHHHHHhCC-------------CHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCch
Q 037085 9 ASIKNQRGETTMHLLSTDG-------------DARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPE 75 (248)
Q Consensus 9 ~~~~~~~g~t~L~~A~~~g-------------~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~ 75 (248)
++.+|.+|.||||+|+..| +.++++.|++.+.++....|..|.||||+|+..|+.+++++|++.+ .
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-~ 81 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEAS-A 81 (253)
T ss_dssp -------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTT-C
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-C
Confidence 5678999999999999987 8999999999999987777999999999999999999999999984 5
Q ss_pred hhhhhccCCCcHHHHHHHcCChHHHHHHHHHHh-ccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhccccccccc
Q 037085 76 SLEKLTSNGETALHLAVKKSRSDAFQALVDEAK-SHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIR 154 (248)
Q Consensus 76 ~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~-~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~ 154 (248)
+++.++..|.||||+|+..++.+++++|++++. + ++..+..|.||||+|+..++.+++++|++.|+ +
T Consensus 82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~ 149 (253)
T 1yyh_A 82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD------LDARMHDGTTPLILAARLAVEGMLEDLINSHA------D 149 (253)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSC------TTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTC------C
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC------ccccCCCCCcHHHHHHHcChHHHHHHHHHcCC------C
Confidence 588889999999999999999999999999876 4 78899999999999999999999999999997 8
Q ss_pred ccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085 155 INTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 155 ~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~ 208 (248)
++.+|..|.||||+|+.. ++.+++++|+++|++++.....+.+ |++.+.
T Consensus 150 ~~~~d~~g~t~L~~A~~~----~~~~~v~~Ll~~ga~~~~~~~~g~t-pL~~A~ 198 (253)
T 1yyh_A 150 VNAVDDLGKSALHWAAAV----NNVDAAVVLLKNGANKDMQNNREET-PLFLAA 198 (253)
T ss_dssp TTCBCTTSCBHHHHHHHH----TCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHH
T ss_pred CCCcCCCCCCHHHHHHHc----CCHHHHHHHHHcCCCCCCcCCCCCC-HHHHHH
Confidence 999999999999999988 7899999999999999888766555 776554
No 18
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=5.8e-33 Score=228.21 Aligned_cols=193 Identities=19% Similarity=0.205 Sum_probs=164.6
Q ss_pred cccCchhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhc
Q 037085 2 ARLWPQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLT 81 (248)
Q Consensus 2 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~ 81 (248)
|...+...+..|..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++.+ ..++..+
T Consensus 44 l~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g-~~~~~~~ 121 (351)
T 3utm_A 44 LTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNACSYGHYEVTELLLKHG-ACVNAMD 121 (351)
T ss_dssp CCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCC
T ss_pred HHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHCCCHHHHHHHHHCC-CCCCCCC
Confidence 34455566778899999999999999999999999999988 788999999999999999999999999984 5578888
Q ss_pred cCCCcHHHHHHHcCChHHHHHHHHHHhccc--------------------------------------------------
Q 037085 82 SNGETALHLAVKKSRSDAFQALVDEAKSHR-------------------------------------------------- 111 (248)
Q Consensus 82 ~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~-------------------------------------------------- 111 (248)
..|.||||+|+..++.+++++|+++|+++.
T Consensus 122 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 201 (351)
T 3utm_A 122 LWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALE 201 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhh
Confidence 999999999999999999999998766532
Q ss_pred ----------------------------------cccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccc
Q 037085 112 ----------------------------------KEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINT 157 (248)
Q Consensus 112 ----------------------------------~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 157 (248)
....++.+|..|.||||+|+..|+.+++++|+++|+ +++.
T Consensus 202 ~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga------~~n~ 275 (351)
T 3utm_A 202 IINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGA------KMNA 275 (351)
T ss_dssp CTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC------CTTC
T ss_pred cccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC------CCCC
Confidence 112345678889999999999999999999999987 8889
Q ss_pred cCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccccc
Q 037085 158 VNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWN 207 (248)
Q Consensus 158 ~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~ 207 (248)
+|..|+||||+|+.. ++.+++++|+++|++++.....+.+ +++.+
T Consensus 276 ~d~~g~t~L~~A~~~----~~~~~v~~Ll~~gad~~~~~~~g~t-al~~a 320 (351)
T 3utm_A 276 LDSLGQTALHRAALA----GHLQTCRLLLSYGSDPSIISLQGFT-AAQMG 320 (351)
T ss_dssp CCTTSCCHHHHHHHH----TCHHHHHHHHHTTCCTTCCCTTSCC-HHHHS
T ss_pred cCCCCCCHHHHHHHc----CcHHHHHHHHHcCCCCCCcCCCCCC-hhhhh
Confidence 999999999999987 7889999999999998887766655 66554
No 19
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=5.5e-33 Score=220.30 Aligned_cols=180 Identities=17% Similarity=0.218 Sum_probs=160.2
Q ss_pred hHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcH
Q 037085 8 LASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETA 87 (248)
Q Consensus 8 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~ 87 (248)
.++..|.+|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|++.+.+ ++. +..|.||
T Consensus 28 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~-~~~g~t~ 104 (261)
T 2xai_A 28 AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLLQHGAS-VQP-ESDLASP 104 (261)
T ss_dssp CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SSC-SCTTCCH
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCC-CCCCCCH
Confidence 35677889999999999999999999999999888 78899999999999999999999999998544 433 4569999
Q ss_pred HHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHH
Q 037085 88 LHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQ 167 (248)
Q Consensus 88 lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~ 167 (248)
||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+++|+ +++. +..|.||||
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~-~~~g~t~Lh 171 (261)
T 2xai_A 105 IHEAARRGHVECVNSLIAYGGN------IDHKISHLGTPLYLACENQQRACVKKLLESGA------DVNQ-GKGQDSPLH 171 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC------TTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTC------CTTC-CBTTBCHHH
T ss_pred HHHHHHcCcHHHHHHHHHcCCC------CCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCC------CCCC-CCCCCChHH
Confidence 9999999999999999999888 88899999999999999999999999999998 6764 889999999
Q ss_pred HHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085 168 LCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 168 ~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~ 208 (248)
+|+.. ++.+++++|+++|++++.+...+.+ |++.+.
T Consensus 172 ~A~~~----~~~~~v~~Ll~~gad~~~~d~~g~t-pl~~A~ 207 (261)
T 2xai_A 172 AVART----ASEELACLLMDFGADTQAKNAEGKR-PVELVP 207 (261)
T ss_dssp HHHHH----TCHHHHHHHHHTTCCTTCCCTTSCC-GGGGSC
T ss_pred HHHHc----CCHHHHHHHHHcCCCCCCcCCCCCC-hhhhcc
Confidence 99988 7889999999999999988777666 777665
No 20
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=5e-34 Score=227.20 Aligned_cols=183 Identities=20% Similarity=0.176 Sum_probs=123.1
Q ss_pred hhHhhhccCCCCHHHHHHhCCCH-HHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCC
Q 037085 7 QLASIKNQRGETTMHLLSTDGDA-RMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGE 85 (248)
Q Consensus 7 ~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~ 85 (248)
..++..+..|.||||.|+..+.. .+++.|++.|.++ +.+|.+|.||||+|+..|+.+++++|++.+ .+++..+..|.
T Consensus 43 ~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~-a~~~~~~~~g~ 120 (269)
T 4b93_B 43 DTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-NVTSQDGSSPLHVAALHGRADLIPLLLKHG-ANAGARNADQA 120 (269)
T ss_dssp --------------------------------CCCCT-TCCCTTSCCHHHHHHHTTCTTHHHHHHHTT-CCTTCCCTTCC
T ss_pred ccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHhcC-CCcCccCCCCC
Confidence 34566777888888888877665 4778888888887 677888888888888888888888888874 44677778888
Q ss_pred cHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCH
Q 037085 86 TALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTA 165 (248)
Q Consensus 86 t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tp 165 (248)
||+|+|+..++.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|+ |++.++..|.||
T Consensus 121 t~l~~a~~~~~~~~~~~Ll~~g~~------~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga------dvn~~~~~g~t~ 188 (269)
T 4b93_B 121 VPLHLACQQGHFQVVKCLLDSNAK------PNKKDLSGNTPLIYACSGGHHELVALLLQHGA------SINASNNKGNTA 188 (269)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC------SCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTC------CTTCBCTTSCBH
T ss_pred CccccccccChHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC------CCCccccCCCcH
Confidence 888888888888888888888777 77788888888888888888888888888887 788888888888
Q ss_pred HHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085 166 LQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 166 l~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~ 208 (248)
||+|+.. ++.+++++|+++|++++.....+.+ |++++.
T Consensus 189 Lh~A~~~----g~~~~v~~Ll~~Gad~~~~d~~G~T-pL~~A~ 226 (269)
T 4b93_B 189 LHEAVIE----KHVFVVELLLLHGASVQVLNKRQRT-AVDCAE 226 (269)
T ss_dssp HHHHHHT----TCHHHHHHHHHTTCCSCCCCTTSCC-SGGGSC
T ss_pred HHHHHHc----CCHHHHHHHHHCCCCCCCcCCCCCC-HHHHHH
Confidence 8888877 6778888888888888777766554 777664
No 21
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=224.52 Aligned_cols=170 Identities=23% Similarity=0.336 Sum_probs=147.7
Q ss_pred chhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCC
Q 037085 6 PQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGE 85 (248)
Q Consensus 6 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~ 85 (248)
+-.++..|.+|+||||+|+..|+.+++++|++.++++ ...+..|.||+|+|+..++.+++++|++.+ .+++.+|..|.
T Consensus 76 Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-~~~n~~d~~g~ 153 (269)
T 4b93_B 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLDSN-AKPNKKDLSGN 153 (269)
T ss_dssp CCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTCC
T ss_pred CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHHCC-CCCCCCCCCCC
Confidence 3346778999999999999999999999999999998 788999999999999999999999999984 56888999999
Q ss_pred cHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCH
Q 037085 86 TALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTA 165 (248)
Q Consensus 86 t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tp 165 (248)
||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..|+.++|++|+++|+ |++.+|..|+||
T Consensus 154 TpL~~A~~~g~~~~v~~Ll~~gad------vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Ga------d~~~~d~~G~Tp 221 (269)
T 4b93_B 154 TPLIYACSGGHHELVALLLQHGAS------INASNNKGNTALHEAVIEKHVFVVELLLLHGA------SVQVLNKRQRTA 221 (269)
T ss_dssp CHHHHHHHTTCGGGHHHHHHTTCC------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC------CSCCCCTTSCCS
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCC------CCccccCCCcHHHHHHHcCCHHHHHHHHHCCC------CCCCcCCCCCCH
Confidence 999999999999999999999988 89999999999999999999999999999998 899999999999
Q ss_pred HHHHHHcCCCchHHHHHHHHHHhhhhc
Q 037085 166 LQLCNANSQDSVFKEIGWIIQRAVAQQ 192 (248)
Q Consensus 166 l~~a~~~~~~~~~~~i~~~L~~~g~~~ 192 (248)
||+|+.++ ...+++++|...++..
T Consensus 222 L~~A~~~~---~i~~lL~~l~~~~~~~ 245 (269)
T 4b93_B 222 VDCAEQNS---KIMELLQVVPSCVASL 245 (269)
T ss_dssp GGGSCTTC---HHHHHTTC--------
T ss_pred HHHHHhCC---cHHHHHHHHHHhchhh
Confidence 99997652 1245555555555544
No 22
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=4.9e-34 Score=222.89 Aligned_cols=189 Identities=20% Similarity=0.227 Sum_probs=162.2
Q ss_pred hhhccCCCCHHHHHHhCCCHHHHHHHHhcCcc---hhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCc
Q 037085 10 SIKNQRGETTMHLLSTDGDARMVRIFGENNRE---LCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGET 86 (248)
Q Consensus 10 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~---~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t 86 (248)
+..|.+|.||||+|+..|+.++++.|++.+.. ..+..+..|.||||+|+..|+.+++++|++.+ ..++.++..|.|
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t 80 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG-CDPELRDFRGNT 80 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCC-CCSCCCCTTCCC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCC
Confidence 35789999999999999999999999998763 23778999999999999999999999999984 568888999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCC-CCCCH
Q 037085 87 ALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNK-QGQTA 165 (248)
Q Consensus 87 ~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~-~g~tp 165 (248)
|||+|+..++.+++++|++.+.++.....++..+..|.||||+|+..|+.+++++|+++|+ +++.++. .|.||
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~~g~tp 154 (236)
T 1ikn_D 81 PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGA------DVNAQEPCNGRTA 154 (236)
T ss_dssp HHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTC------CTTCCCTTTCCCH
T ss_pred HHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCCCCCCCCCCCH
Confidence 9999999999999999999987654455578899999999999999999999999999998 8999998 99999
Q ss_pred HHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccccC
Q 037085 166 LQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQTR 210 (248)
Q Consensus 166 l~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 210 (248)
||+|+.. ++.+++++|+++|++++.....+.+ |++++...
T Consensus 155 L~~A~~~----~~~~~v~~Ll~~ga~~~~~~~~g~t-pl~~A~~~ 194 (236)
T 1ikn_D 155 LHLAVDL----QNPDLVSLLLKCGADVNRVTYQGYS-PYQLTWGR 194 (236)
T ss_dssp HHHHHHT----TCHHHHHHHHTTTCCSCCCCTTCCC-GGGGCTTS
T ss_pred HHHHHHc----CCHHHHHHHHHcCCCCCcccCCCCC-HHHHHHcc
Confidence 9999988 7899999999999999988766655 88766543
No 23
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=5.1e-33 Score=208.24 Aligned_cols=170 Identities=21% Similarity=0.242 Sum_probs=154.1
Q ss_pred ccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHH
Q 037085 13 NQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAV 92 (248)
Q Consensus 13 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~ 92 (248)
+.++.++||.|+..|+.++++.|++.+....+..+..|.||||+|+..|+.+++++|++. +.+++.++..|.||||+|+
T Consensus 2 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 2 SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR-GARINVMNRGDDTPLHLAA 80 (179)
T ss_dssp -----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCCHHHHHH
Confidence 356889999999999999999999997665588999999999999999999999999998 4568888999999999999
Q ss_pred HcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHc
Q 037085 93 KKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNAN 172 (248)
Q Consensus 93 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~ 172 (248)
..++.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+++|+ +++.+|..|.||+++|+..
T Consensus 81 ~~~~~~~v~~Ll~~g~~------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~g~tpl~~A~~~ 148 (179)
T 3f6q_A 81 SHGHRDIVQKLLQYKAD------INAVNEHGNVPLHYACFWGQDQVAEDLVANGA------LVSICNKYGEMPVDKAKAP 148 (179)
T ss_dssp HTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC------CSSBCCTTSCCGGGGSCHH
T ss_pred HcCCHHHHHHHHHcCCC------CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCC------CcchhccCCCCcHHHHHHH
Confidence 99999999999999988 88999999999999999999999999999998 8999999999999999876
Q ss_pred CCCchHHHHHHHHHHhhhhcCCCCCCC
Q 037085 173 SQDSVFKEIGWIIQRAVAQQSPQLPDA 199 (248)
Q Consensus 173 ~~~~~~~~i~~~L~~~g~~~~~~~~~~ 199 (248)
+..+++++|+++|++++......
T Consensus 149 ----~~~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 149 ----LRELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp ----HHHHHHHHHHHTTCCCSCBCCCC
T ss_pred ----HHHHHHHHHHHhhcCcccCCccc
Confidence 89999999999999998765543
No 24
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1e-32 Score=213.31 Aligned_cols=171 Identities=17% Similarity=0.193 Sum_probs=158.4
Q ss_pred hHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcH
Q 037085 8 LASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETA 87 (248)
Q Consensus 8 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~ 87 (248)
..+..|..|.||||+|+..|+.+++++|++.+.......+..|.||||+|+..|+.+++++|++.+ ..++..+..|.||
T Consensus 50 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~ 128 (223)
T 2f8y_A 50 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH-ADVNAVDDLGKSA 128 (223)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTSCBH
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcC-CCCcCcCCCCCcH
Confidence 356678999999999999999999999999998555888999999999999999999999999984 5588889999999
Q ss_pred HHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHH
Q 037085 88 LHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQ 167 (248)
Q Consensus 88 lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~ 167 (248)
||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+++|+ +++.+|..|.||++
T Consensus 129 L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~g~t~l~ 196 (223)
T 2f8y_A 129 LHWAAAVNNVDAAVVLLKNGAN------KDMQNNREETPLFLAAREGSYETAKVLLDHFA------NRDITDHMDRLPRD 196 (223)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC------CTTCCCTTCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC------CCccccccCCCHHH
Confidence 9999999999999999999988 88899999999999999999999999999998 88999999999999
Q ss_pred HHHHcCCCchHHHHHHHHHHhhhhcCCC
Q 037085 168 LCNANSQDSVFKEIGWIIQRAVAQQSPQ 195 (248)
Q Consensus 168 ~a~~~~~~~~~~~i~~~L~~~g~~~~~~ 195 (248)
+|+.. ++.+++++|+++|+...++
T Consensus 197 ~A~~~----~~~~i~~~L~~~g~~~~~~ 220 (223)
T 2f8y_A 197 IAQER----MHHDIVRLLDEYNLVRSPQ 220 (223)
T ss_dssp HHHHT----TCHHHHHHHHHTTCSSCC-
T ss_pred HHHHh----cchHHHHHHHHcCCCcccc
Confidence 99988 7899999999999987664
No 25
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.4e-32 Score=214.84 Aligned_cols=186 Identities=25% Similarity=0.330 Sum_probs=160.3
Q ss_pred hHhhhccCCCCHHHHHHhCCCHHHHHHHHh----cCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccC
Q 037085 8 LASIKNQRGETTMHLLSTDGDARMVRIFGE----NNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSN 83 (248)
Q Consensus 8 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~ 83 (248)
+++.+|.+|.||||+|+..|+.++++.|++ .+.++ +.+|..|.||||+|+..|+.+++++|++.+ ..++..+..
T Consensus 1 l~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~ 78 (241)
T 1k1a_A 1 MATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL-DIYNNLRQTPLHLAVITTLPSVVRLLVTAG-ASPMALDRH 78 (241)
T ss_dssp ------CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTT
T ss_pred CccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCC-CcccccCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCC
Confidence 356789999999999999999999999997 56666 778999999999999999999999999984 557888999
Q ss_pred CCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccC-CCC
Q 037085 84 GETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVN-KQG 162 (248)
Q Consensus 84 g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~-~~g 162 (248)
|.||||+|+..++.+++++|++.+... ...++..+..|.||||+|+..++.+++++|+++|+ +++..+ ..|
T Consensus 79 g~t~l~~A~~~~~~~~~~~Ll~~~~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~------~~~~~~~~~g 150 (241)
T 1k1a_A 79 GQTAAHLACEHRSPTCLRALLDSAAPG--TLDLEARNYDGLTALHVAVNTECQETVQLLLERGA------DIDAVDIKSG 150 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCTT--SCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC------CTTCCCTTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCc--cccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCC------CcccccccCC
Confidence 999999999999999999999998621 11278889999999999999999999999999997 788888 789
Q ss_pred CCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085 163 QTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 163 ~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~ 208 (248)
.||||+|+.. ++.+++++|+++|++++.....+.+ +++++.
T Consensus 151 ~t~L~~A~~~----~~~~~v~~Ll~~g~~~~~~~~~g~t-~L~~A~ 191 (241)
T 1k1a_A 151 RSPLIHAVEN----NSLSMVQLLLQHGANVNAQMYSGSS-ALHSAS 191 (241)
T ss_dssp CCHHHHHHHT----TCHHHHHHHHHTTCCTTCBCTTSCB-HHHHHH
T ss_pred CcHHHHHHHc----CCHHHHHHHHHcCCCCCCcCCCCCC-HHHHHH
Confidence 9999999988 7899999999999999887766554 776654
No 26
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=6.1e-33 Score=205.96 Aligned_cols=163 Identities=25% Similarity=0.327 Sum_probs=147.9
Q ss_pred HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHH
Q 037085 9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETAL 88 (248)
Q Consensus 9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l 88 (248)
.......+.++|++|+..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++.+ ..++..+..|.|||
T Consensus 7 ~~~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L 84 (169)
T 2y1l_E 7 HHHHGSDLGKKLLEAARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLLKNG-ADVNAVDHAGMTPL 84 (169)
T ss_dssp ------CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHH
T ss_pred cccCCCcccchHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHH
Confidence 3455677889999999999999999999999988 788999999999999999999999999984 55788899999999
Q ss_pred HHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHH
Q 037085 89 HLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQL 168 (248)
Q Consensus 89 h~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~ 168 (248)
|+|+..++.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+++|+ +++.+|..|.||+++
T Consensus 85 ~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~l~~ 152 (169)
T 2y1l_E 85 RLAALFGHLEIVEVLLKNGAD------VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGA------DVNAQDKFGKTAFDI 152 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCCCcCCCCCCHHHH
Confidence 999999999999999999988 88999999999999999999999999999998 889999999999999
Q ss_pred HHHcCCCchHHHHHHHHHHhh
Q 037085 169 CNANSQDSVFKEIGWIIQRAV 189 (248)
Q Consensus 169 a~~~~~~~~~~~i~~~L~~~g 189 (248)
|+.. ++.+++++|++.|
T Consensus 153 A~~~----~~~~~~~~L~~~G 169 (169)
T 2y1l_E 153 SIDN----GNEDLAEILQKLN 169 (169)
T ss_dssp HHHT----TCHHHHHHHHTC-
T ss_pred HHHh----CCHHHHHHHHHcC
Confidence 9988 7899999999875
No 27
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=3.3e-33 Score=205.74 Aligned_cols=160 Identities=21% Similarity=0.255 Sum_probs=146.9
Q ss_pred cCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHH
Q 037085 14 QRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVK 93 (248)
Q Consensus 14 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~ 93 (248)
....||||.|+..|+.+++++|++.+.++ +.++..|.||||+|+. |+.+++++|++. +.+++.++..|.||||+|+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~ 79 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLLLR-GANPDLKDRTGFAVIHDAAR 79 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHH
Confidence 35679999999999999999999999988 7889999999999999 999999999998 45688889999999999999
Q ss_pred cCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcC
Q 037085 94 KSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANS 173 (248)
Q Consensus 94 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~ 173 (248)
.++.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++ +++.+|..|.||||+|+..
T Consensus 80 ~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~~g~t~l~~A~~~- 147 (162)
T 1ihb_A 80 AGFLDTLQTLLEFQAD------VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS-----NVGHRNHKGDTACDLARLY- 147 (162)
T ss_dssp HTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC-----CTTCCCTTSCCHHHHHHHT-
T ss_pred cCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC-----CCCCcCCCCCcHHHHHHHc-
Confidence 9999999999999888 889999999999999999999999999999983 3689999999999999988
Q ss_pred CCchHHHHHHHHHHhhhh
Q 037085 174 QDSVFKEIGWIIQRAVAQ 191 (248)
Q Consensus 174 ~~~~~~~i~~~L~~~g~~ 191 (248)
++.+++++|+++|++
T Consensus 148 ---~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 148 ---GRNEVVSLMQANGAG 162 (162)
T ss_dssp ---TCHHHHHHHHHTC--
T ss_pred ---CCHHHHHHHHHhCCC
Confidence 789999999999985
No 28
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.5e-32 Score=211.81 Aligned_cols=177 Identities=18% Similarity=0.162 Sum_probs=158.8
Q ss_pred CCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCc-hhhhh-hccCCCcHHHHHHH
Q 037085 16 GETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICP-ESLEK-LTSNGETALHLAVK 93 (248)
Q Consensus 16 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~-~~~~~-~~~~g~t~lh~a~~ 93 (248)
|.||||+|+..|+.++++.|++.++......+..|.||||+|+..|+.+++++|++.++ ...+. .+..|.||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 78999999999999999999999998877789999999999999999999999999862 23444 78899999999999
Q ss_pred cCChHHHHHHHHHH--hccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHH
Q 037085 94 KSRSDAFQALVDEA--KSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNA 171 (248)
Q Consensus 94 ~~~~~~~~~Ll~~~--~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~ 171 (248)
.|+.+++++|+++| .+ ++..+..|.||||+|+..++.+++++|+++|+ +++.+|..|.||||+|+.
T Consensus 82 ~~~~~~~~~Ll~~g~~~~------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~------~~~~~~~~g~t~L~~A~~ 149 (228)
T 2dzn_A 82 VGNLEVVKSLYDRPLKPD------LNKITNQGVTCLHLAVGKKWFEVSQFLIENGA------SVRIKDKFNQIPLHRAAS 149 (228)
T ss_dssp HCCHHHHHHHHSSSSCCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC------CSCCCCTTSCCHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCcc------cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCC------CccccCCCCCCHHHHHHH
Confidence 99999999999987 54 78899999999999999999999999999997 899999999999999998
Q ss_pred cCCCchHHHHHHHHHHhh-hhcCCCCCCCCCcccccccc
Q 037085 172 NSQDSVFKEIGWIIQRAV-AQQSPQLPDAGSANVSWNQT 209 (248)
Q Consensus 172 ~~~~~~~~~i~~~L~~~g-~~~~~~~~~~~~~~~~~~~~ 209 (248)
. ++.+++++|++.| ++++.....+.+ |++++..
T Consensus 150 ~----~~~~~v~~Ll~~g~~~~~~~d~~g~t-~L~~A~~ 183 (228)
T 2dzn_A 150 V----GSLKLIELLCGLGKSAVNWQDKQGWT-PLFHALA 183 (228)
T ss_dssp T----TCHHHHHHHHTTTCCCSCCCCTTSCC-HHHHHHH
T ss_pred c----CCHHHHHHHHhcCcccccCcCCCCCC-HHHHHHH
Confidence 8 7889999999999 888877766555 7776653
No 29
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.1e-32 Score=216.94 Aligned_cols=173 Identities=17% Similarity=0.126 Sum_probs=155.3
Q ss_pred CCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHc
Q 037085 15 RGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKK 94 (248)
Q Consensus 15 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~ 94 (248)
+|+||||+|+..|+.+++++|++++.++ +.+|..|.||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~ 79 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILLKHG-AQVNGVTADWHTPLFNACVS 79 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHc
Confidence 6899999999999999999999999987 788999999999999999999999999984 56888999999999999999
Q ss_pred CChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCC
Q 037085 95 SRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQ 174 (248)
Q Consensus 95 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~ 174 (248)
|+.+++++|+++|++ ++. +..|.||||+|+..|+.+++++|+++|+ +++.+|..|.||||+|+..
T Consensus 80 ~~~~~v~~Ll~~g~~------~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~~-- 144 (261)
T 2xai_A 80 GSWDCVNLLLQHGAS------VQP-ESDLASPIHEAARRGHVECVNSLIAYGG------NIDHKISHLGTPLYLACEN-- 144 (261)
T ss_dssp TCHHHHHHHHHTTCC------SSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCBTTTBCHHHHHHHT--
T ss_pred CCHHHHHHHHHCCCC------CCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCC------CCCcCCCCCCCHHHHHHHh--
Confidence 999999999999887 443 4569999999999999999999999998 8999999999999999988
Q ss_pred CchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085 175 DSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 175 ~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~ 208 (248)
++.+++++|+++|++++. ...+.++++++.
T Consensus 145 --~~~~~v~~Ll~~g~~~~~--~~~g~t~Lh~A~ 174 (261)
T 2xai_A 145 --QQRACVKKLLESGADVNQ--GKGQDSPLHAVA 174 (261)
T ss_dssp --TCHHHHHHHHHHTCCTTC--CBTTBCHHHHHH
T ss_pred --CCHHHHHHHHHcCCCCCC--CCCCCChHHHHH
Confidence 789999999999999985 334455776554
No 30
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=6.2e-32 Score=205.71 Aligned_cols=171 Identities=18% Similarity=0.257 Sum_probs=159.0
Q ss_pred cccCchhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhc
Q 037085 2 ARLWPQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLT 81 (248)
Q Consensus 2 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~ 81 (248)
|+..+..++..|.+|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++.++..++..+
T Consensus 25 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~ 103 (201)
T 3hra_A 25 LQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHN 103 (201)
T ss_dssp HTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCC
T ss_pred HHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhccCccccccc
Confidence 44555567788999999999999999999999999999998 78899999999999999999999999987777889999
Q ss_pred cCCCcHHHHHHHcCChHHHHHHHHHH-hccccccccccccCCCCcHhHHHHhCCc-----HHHHHHHHhhcccccccccc
Q 037085 82 SNGETALHLAVKKSRSDAFQALVDEA-KSHRKEHLFTWKDKEGNTVLHLATLNKL-----KQIVELLIRENSNRRIMIRI 155 (248)
Q Consensus 82 ~~g~t~lh~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~~~g~t~Lh~A~~~~~-----~~~v~~Ll~~g~~~~~~~~~ 155 (248)
..|.||||+|+..++.+++++|++++ .+ ++.+|..|.||||+|+..++ .+++++|+++|+ ++
T Consensus 104 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga------~~ 171 (201)
T 3hra_A 104 RYGGNALIPAAEKGHIDNVKLLLEDGRED------IDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGA------DQ 171 (201)
T ss_dssp TTSCCSHHHHHHTTCHHHHHHHHHHCCCC------TTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTC------CT
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCC------cCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCC------CC
Confidence 99999999999999999999999998 66 88999999999999999988 999999999998 89
Q ss_pred cccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhh
Q 037085 156 NTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAV 189 (248)
Q Consensus 156 ~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g 189 (248)
+.+|..|+||||+|+.. ++.+++++|+++|
T Consensus 172 ~~~~~~g~t~l~~A~~~----~~~~~~~~Ll~~G 201 (201)
T 3hra_A 172 SIKDNSGRTAMDYANQK----GYTEISKILAQYN 201 (201)
T ss_dssp TCCCTTSCCHHHHHHHH----TCHHHHHHHHTCC
T ss_pred CccCCCCCCHHHHHHHc----CCHhHHHHHHhcC
Confidence 99999999999999988 7899999999876
No 31
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.2e-32 Score=213.42 Aligned_cols=181 Identities=19% Similarity=0.245 Sum_probs=164.6
Q ss_pred HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHH
Q 037085 9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETAL 88 (248)
Q Consensus 9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l 88 (248)
.+..|..|.||||+|+..|+.+++++|++++.++ +..+..|.||||+|+..|+.+++++|++.+ ..++.++..|.|||
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L 81 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANI-DTCSEDQRTPLMEAAENNHLEAVKYLIKAG-ALVDPKDAEGSTCL 81 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTT-CCCCCCCTTSCCHH
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCc-CccCCCCCCHHHHHHHhCCHHHHHHHHhCC-CCCCCCCCCCCcHH
Confidence 3567889999999999999999999999999988 788999999999999999999999999984 55788899999999
Q ss_pred HHHHHcCChHHHHHHHHHH-hccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHH
Q 037085 89 HLAVKKSRSDAFQALVDEA-KSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQ 167 (248)
Q Consensus 89 h~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~ 167 (248)
|+|+..|+.+++++|++.+ .+ ++..+..|.||||+|+..++.+++++|+++|+ +++.++..|.||||
T Consensus 82 ~~A~~~~~~~~~~~Ll~~~~~~------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~------~~~~~~~~g~t~L~ 149 (237)
T 3b7b_A 82 HLAAKKGHYEVVQYLLSNGQMD------VNCQDDGGWTPMIWATEYKHVDLVKLLLSKGS------DINIRDNEENICLH 149 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCC------cccCCCCCCCHHHHHHHcCCHHHHHHHHHCCC------CCCccCCCCCCHHH
Confidence 9999999999999999987 44 78899999999999999999999999999998 88999999999999
Q ss_pred HHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085 168 LCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 168 ~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~ 208 (248)
+|+.. +..+++++|+++|++++.....+.+ |++.+.
T Consensus 150 ~A~~~----~~~~~~~~Ll~~g~~~~~~~~~g~t-~L~~A~ 185 (237)
T 3b7b_A 150 WAAFS----GCVDIAEILLAAKCDLHAVNIHGDS-PLHIAA 185 (237)
T ss_dssp HHHHH----CCHHHHHHHHTTTCCTTCCCTTCCC-HHHHHH
T ss_pred HHHHC----CCHHHHHHHHHcCCCCCCcCCCCCC-HHHHHH
Confidence 99988 6889999999999999887765554 776554
No 32
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.1e-32 Score=218.72 Aligned_cols=176 Identities=16% Similarity=0.212 Sum_probs=105.7
Q ss_pred hccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHH
Q 037085 12 KNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLA 91 (248)
Q Consensus 12 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a 91 (248)
.|..|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|++.+.+ ++. +..|.||||+|
T Consensus 88 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~-~~~g~t~L~~A 164 (285)
T 3d9h_A 88 ITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLLQHGAS-VQP-ESDLASPIHEA 164 (285)
T ss_dssp ECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SSC-SCTTSCHHHHH
T ss_pred cCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCC-CCC-CCCCCCHHHHH
Confidence 3444444444444444444444444444443 33444444444444444444444444444221 221 22345555555
Q ss_pred HHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHH
Q 037085 92 VKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNA 171 (248)
Q Consensus 92 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~ 171 (248)
+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.|+ +++. +..|.||||+|+.
T Consensus 165 ~~~g~~~~v~~Ll~~g~~------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga------~~~~-~~~g~t~L~~A~~ 231 (285)
T 3d9h_A 165 ARRGHVECVNSLIAYGGN------IDHKISHLGTPLYLACENQQRACVKKLLESGA------DVNQ-GKGQDSPLHAVVR 231 (285)
T ss_dssp HHHTCHHHHHHHHHTTCC------TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTC------CTTC-CBTTBCHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCC------CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCC------CCCC-CCCCCCHHHHHHH
Confidence 555555555555555444 66777888888888888888888888888876 5553 7778888888887
Q ss_pred cCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085 172 NSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 172 ~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~ 208 (248)
. ++.+++++|+++|++++.+...+.+ |++++.
T Consensus 232 ~----~~~~~v~~Ll~~gad~~~~d~~g~t-~l~~A~ 263 (285)
T 3d9h_A 232 T----ASEELACLLMDFGADTQAKNAEGKR-PVELVP 263 (285)
T ss_dssp T----TCHHHHHHHHHTTCCTTCCCTTSCC-GGGGSC
T ss_pred c----CCHHHHHHHHHCCCCCCCcCCCCCC-HHHHhc
Confidence 7 6778888888888888777766555 776665
No 33
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2e-32 Score=212.81 Aligned_cols=167 Identities=22% Similarity=0.242 Sum_probs=155.9
Q ss_pred hHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcH
Q 037085 8 LASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETA 87 (248)
Q Consensus 8 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~ 87 (248)
.++..|..|.||||+|+..|+.+++++|++++.++ +.++..|.||||+|+..|+.+++++|++.+ ..++.++..|.||
T Consensus 65 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~ 142 (231)
T 3aji_A 65 PVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKNRHEIAVMLLEGG-ANPDAKDHYDATA 142 (231)
T ss_dssp CSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCH
T ss_pred CCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcH
Confidence 35567889999999999999999999999999998 788999999999999999999999999984 5578889999999
Q ss_pred HHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHH
Q 037085 88 LHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQ 167 (248)
Q Consensus 88 lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~ 167 (248)
||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+++|+ +++.+|..|.||++
T Consensus 143 L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~g~t~l~ 210 (231)
T 3aji_A 143 MHRAAAKGNLKMVHILLFYKAS------TNIQDTEGNTPLHLACDEERVEEAKFLVTQGA------SIYIENKEEKTPLQ 210 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC------CSCCCCTTSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHhcCCC------ccccCCCCCCHHHHHHHCCCHHHHHHHHHCCC------CCCCCCCCCCCHHH
Confidence 9999999999999999999888 88899999999999999999999999999998 88999999999999
Q ss_pred HHHHcCCCchHHHHHHHHHHhhhhc
Q 037085 168 LCNANSQDSVFKEIGWIIQRAVAQQ 192 (248)
Q Consensus 168 ~a~~~~~~~~~~~i~~~L~~~g~~~ 192 (248)
+|... ++.+++++|.++|+++
T Consensus 211 ~A~~~----~~~~i~~lL~~~~a~i 231 (231)
T 3aji_A 211 VAKGG----LGLILKRLAEGEEASM 231 (231)
T ss_dssp HSCHH----HHHHHHHHHHHHHHCC
T ss_pred HHHhh----HHHHHHHHHccccccC
Confidence 99876 8999999999999863
No 34
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.5e-32 Score=220.46 Aligned_cols=177 Identities=15% Similarity=0.139 Sum_probs=154.7
Q ss_pred HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHH
Q 037085 9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETAL 88 (248)
Q Consensus 9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l 88 (248)
++.+|.+|.||||+|+..|+.+++++|++.+.++ +.. +|.||||+|+..|+.+++++|++.+ .+++.+|..|.|||
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~--~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~t~L 99 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVKILLFSG-LDDSQFDDKGNTAL 99 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG-SCC--TTCCHHHHHTTSSSCHHHHHHHHTT-CCTTCCCTTSCCHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCC--CCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCcHH
Confidence 5778899999999999999999999999999887 434 5899999999999999999999984 45788899999999
Q ss_pred HHHHHcCChHHHHHHHHHHhccccccccccccCCC-CcHhHHHHhCCcHHHHHHHHhhcccccccccccccCC-CCCCHH
Q 037085 89 HLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEG-NTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNK-QGQTAL 166 (248)
Q Consensus 89 h~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g-~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~-~g~tpl 166 (248)
|+|+..|+.+++++|+++|++ ++.++..| .||||+|+..|+.+++++|+++|++ . .+. .|.|||
T Consensus 100 ~~A~~~g~~~~v~~Ll~~ga~------~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~------~--~~~~~g~t~L 165 (285)
T 3kea_A 100 YYAVDSGNMQTVKLFVKKNWR------LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS------T--FDLAILLSCI 165 (285)
T ss_dssp HHHHHTTCHHHHHHHHHHCGG------GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCT------T--CCCSTHHHHH
T ss_pred HHHHHcCCHHHHHHHHhcCCC------CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc------c--ccccCCccHH
Confidence 999999999999999999988 88899999 7999999999999999999999873 3 222 889999
Q ss_pred HHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccccc
Q 037085 167 QLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWN 207 (248)
Q Consensus 167 ~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~ 207 (248)
|+|+.. ++.+++++|+++|++++.....+.+.+++++
T Consensus 166 ~~A~~~----g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A 202 (285)
T 3kea_A 166 HITIKN----GHVDMMILLLDYMTSTNTNNSLLFIPDIKLA 202 (285)
T ss_dssp HHHHHT----TCHHHHHHHHHHHHHTCTTCCCBCCTTHHHH
T ss_pred HHHHHc----ChHHHHHHHHHcCCCCCcccCCCCChHHHHH
Confidence 999987 7789999999999999888877776546644
No 35
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=2.7e-33 Score=221.21 Aligned_cols=167 Identities=20% Similarity=0.193 Sum_probs=150.8
Q ss_pred hccCCCCHHHHHHhC---CCHHHHHHHHhcCcchhh----------hhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhh
Q 037085 12 KNQRGETTMHLLSTD---GDARMVRIFGENNRELCL----------EVDNSLMIPLHRAALEGDSDVIRALVSICPESLE 78 (248)
Q Consensus 12 ~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~----------~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~ 78 (248)
.|..|.||||+|+.. |+.+++++|++.+++... ..|..|.||||+|+..|+.+++++|++.+ .+++
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~ 117 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENG-ADVH 117 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCTT
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcC-CCCC
Confidence 688999999999999 999999999999877621 23467999999999999999999999985 4577
Q ss_pred hhccC-------------CCcHHHHHHHcCChHHHHHHHH---HHhccccccccccccCCCCcHhHHHHh--CCcHH---
Q 037085 79 KLTSN-------------GETALHLAVKKSRSDAFQALVD---EAKSHRKEHLFTWKDKEGNTVLHLATL--NKLKQ--- 137 (248)
Q Consensus 79 ~~~~~-------------g~t~lh~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~~g~t~Lh~A~~--~~~~~--- 137 (248)
..+.. |.||||+|+..|+.+++++|++ +|++ ++.+|..|+||||+|+. .++.+
T Consensus 118 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~------~n~~d~~g~TpLh~A~~~~~~~~~~~~ 191 (256)
T 2etb_A 118 LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS------LEATDSLGNTVLHALVMIADNSPENSA 191 (256)
T ss_dssp CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC------TTCCCTTSCCHHHHHHHHCCSCHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC------cCccCCCCCCHHHHHHHcccCCchhhH
Confidence 77765 9999999999999999999999 8888 89999999999999999 78888
Q ss_pred ----HHHHHHhhcccccccccc-------cccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCC
Q 037085 138 ----IVELLIRENSNRRIMIRI-------NTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQ 195 (248)
Q Consensus 138 ----~v~~Ll~~g~~~~~~~~~-------~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~ 195 (248)
++++|+++|+ ++ +.+|..|+||||+|+.. ++.+++++|+++|++..+.
T Consensus 192 ~~~~iv~~Ll~~ga------~~~~~~~~~~~~d~~g~tpL~~A~~~----g~~~~v~~Ll~~g~~~~~~ 250 (256)
T 2etb_A 192 LVIHMYDGLLQMGA------RLCPTVQLEEISNHQGLTPLKLAAKE----GKIEIFRHILQREFSGAAA 250 (256)
T ss_dssp HHHHHHHHHHHHHH------HHSTTCCGGGCCCTTSCCHHHHHHHT----TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC------CcccccccccccCCCCCCHHHHHHHh----CCHHHHHHHHhCCCCCCCc
Confidence 9999999998 67 89999999999999988 7899999999999987543
No 36
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=4e-32 Score=218.03 Aligned_cols=179 Identities=16% Similarity=0.104 Sum_probs=160.9
Q ss_pred HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHH
Q 037085 9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETAL 88 (248)
Q Consensus 9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l 88 (248)
....|..|+||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|++. +..++.+|..|.|||
T Consensus 52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~t~L 129 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHVSPLHEACLGGHLSCVKILLKH-GAQVNGVTADWHTPL 129 (285)
T ss_dssp TCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCS-CEECTTCCCHHHHHHHTTCHHHHHHHHHT-TCCSSCCCTTCCCHH
T ss_pred ccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHCCcHHHHHHHHHC-CCCCCCCCCCCCCHH
Confidence 4567899999999999999999999999999987 78999999999999999999999999998 456888899999999
Q ss_pred HHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHH
Q 037085 89 HLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQL 168 (248)
Q Consensus 89 h~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~ 168 (248)
|+|+..++.+++++|+++|++ ++. +..|.||||+|+..|+.+++++|+++|+ +++.+|..|.||||+
T Consensus 130 ~~A~~~~~~~~v~~Ll~~g~~------~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~------~~~~~d~~g~t~L~~ 196 (285)
T 3d9h_A 130 FNACVSGSWDCVNLLLQHGAS------VQP-ESDLASPIHEAARRGHVECVNSLIAYGG------NIDHKISHLGTPLYL 196 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC------SSC-SCTTSCHHHHHHHHTCHHHHHHHHHTTC------CTTCCBTTTBCHHHH
T ss_pred HHHHHcCHHHHHHHHHHCCCC------CCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCC------CCCCcCCCCCCHHHH
Confidence 999999999999999999887 443 4459999999999999999999999997 899999999999999
Q ss_pred HHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085 169 CNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 169 a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~ 208 (248)
|+.. ++.+++++|+++|++++. ...+.++++++.
T Consensus 197 A~~~----~~~~~v~~Ll~~ga~~~~--~~~g~t~L~~A~ 230 (285)
T 3d9h_A 197 ACEN----QQRACVKKLLESGADVNQ--GKGQDSPLHAVV 230 (285)
T ss_dssp HHHT----TCHHHHHHHHHTTCCTTC--CBTTBCHHHHHH
T ss_pred HHHc----CcHHHHHHHHHCCCCCCC--CCCCCCHHHHHH
Confidence 9988 789999999999999884 333445776554
No 37
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=4.1e-32 Score=218.96 Aligned_cols=184 Identities=17% Similarity=0.180 Sum_probs=139.8
Q ss_pred ccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHH
Q 037085 13 NQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAV 92 (248)
Q Consensus 13 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~ 92 (248)
+..|.|+||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++. +.+++..|..|.||||+|+
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~ 114 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGADI-NYANVDGLTALHQACIDDNVDMVKFLVEN-GANINQPDNEGWIPLHAAA 114 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHH
Confidence 345667777777777777777777777666 56677777777777777777777777776 3446666777777777777
Q ss_pred HcCChHHHHHHHHHHhccccc------------------------------------------------------ccccc
Q 037085 93 KKSRSDAFQALVDEAKSHRKE------------------------------------------------------HLFTW 118 (248)
Q Consensus 93 ~~~~~~~~~~Ll~~~~~~~~~------------------------------------------------------~~~~~ 118 (248)
..|+.+++++|+++|+++... .....
T Consensus 115 ~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 194 (299)
T 1s70_B 115 SCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVR 194 (299)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred HcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhh
Confidence 777777777777766553200 00112
Q ss_pred ccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCC
Q 037085 119 KDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPD 198 (248)
Q Consensus 119 ~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~ 198 (248)
.+..|.||||+|+..|+.+++++|+++|+ +++.+|..|.||||+|+.. ++.+++++|+++|++++.....
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~------d~~~~d~~g~tpL~~A~~~----~~~~~v~~Ll~~gad~~~~d~~ 264 (299)
T 1s70_B 195 HAKSGGTALHVAAAKGYTEVLKLLIQARY------DVNIKDYDGWTPLHAAAHW----GKEEACRILVENLCDMEAVNKV 264 (299)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHTTTC------CTTCCCTTCCCHHHHHHHT----TCHHHHHHHHHTTCCTTCCCTT
T ss_pred hcCCCCCHHHHHHHCCcHHHHHHHHHcCC------CCCCcCCCCCcHHHHHHhc----CCHHHHHHHHHcCCCCCCcCCC
Confidence 44678999999999999999999999997 8999999999999999988 7899999999999999888776
Q ss_pred CCCcccccccc
Q 037085 199 AGSANVSWNQT 209 (248)
Q Consensus 199 ~~~~~~~~~~~ 209 (248)
+.+ |++.+..
T Consensus 265 g~t-~l~~A~~ 274 (299)
T 1s70_B 265 GQT-AFDVADE 274 (299)
T ss_dssp SCC-TTTSCCS
T ss_pred CCC-HHHHHHH
Confidence 665 8877653
No 38
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.3e-32 Score=228.08 Aligned_cols=184 Identities=21% Similarity=0.210 Sum_probs=119.0
Q ss_pred hhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhC---chhhhh-------
Q 037085 10 SIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSIC---PESLEK------- 79 (248)
Q Consensus 10 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~---~~~~~~------- 79 (248)
+..|..|.||||+|+..|+.+++++|++.+.+. .+..|.||||+|+..|+.+++++|++.+ +..++.
T Consensus 47 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 123 (364)
T 3ljn_A 47 TIQNRFGCTALHLACKFGCVDTAKYLASVGEVH---SLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDE 123 (364)
T ss_dssp TCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC---CCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCC
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---cccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcch
Confidence 444555555555555555555555555555533 1224455555555555555555555541 111222
Q ss_pred ----------hccCCCcHHHHHHHcC--ChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcc
Q 037085 80 ----------LTSNGETALHLAVKKS--RSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENS 147 (248)
Q Consensus 80 ----------~~~~g~t~lh~a~~~~--~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~ 147 (248)
.+..|.||||+|+..| +.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 124 ~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 197 (364)
T 3ljn_A 124 REVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS------PTAKDKADETPLMRAMEFRNREALDLMMDTVP 197 (364)
T ss_dssp CCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCS
T ss_pred HhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC------CcccCCCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 5667788888888888 78888888888777 77777888888888888888888888888776
Q ss_pred cccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085 148 NRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 148 ~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~ 208 (248)
+.. .++++..|..|.||||+|+.. ++.+++++|+++|++++.....+.+ |++++.
T Consensus 198 ~~~-~~~~~~~~~~g~t~L~~A~~~----g~~~~v~~Ll~~gad~~~~d~~g~t-pL~~A~ 252 (364)
T 3ljn_A 198 SKS-SLRLDYANKQGNSHLHWAILI----NWEDVAMRFVEMGIDVNMEDNEHTV-PLYLSV 252 (364)
T ss_dssp CSS-SCCTTCCCTTCCCTTHHHHTT----TCHHHHHHHHTTTCCTTCCCTTSCC-HHHHHH
T ss_pred ccc-cccccccCCCCCcHHHHHHHc----CCHHHHHHHHHcCCCCCCCCCCCCC-HHHHHH
Confidence 211 123777788888888888766 6778888888888887766655544 665444
No 39
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=2.3e-32 Score=217.95 Aligned_cols=171 Identities=16% Similarity=0.157 Sum_probs=146.3
Q ss_pred hhccCCCCHHHHHHhC---CCHHHHHHHHhcCcchh------h----hhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhh
Q 037085 11 IKNQRGETTMHLLSTD---GDARMVRIFGENNRELC------L----EVDNSLMIPLHRAALEGDSDVIRALVSICPESL 77 (248)
Q Consensus 11 ~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~------~----~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~ 77 (248)
..|..|.||||+|+.. |+.+++++|++.+++.. + ..|..|.||||+|+..|+.+++++|++.+ .++
T Consensus 49 ~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g-a~~ 127 (273)
T 2pnn_A 49 KDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENG-ADV 127 (273)
T ss_dssp SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCT
T ss_pred ccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCC-CCc
Confidence 3478999999999987 99999999999986531 1 14668999999999999999999999985 457
Q ss_pred hhhcc--------------CCCcHHHHHHHcCChHHHHHHHH---HHhccccccccccccCCCCcHhHHHHhCCc-----
Q 037085 78 EKLTS--------------NGETALHLAVKKSRSDAFQALVD---EAKSHRKEHLFTWKDKEGNTVLHLATLNKL----- 135 (248)
Q Consensus 78 ~~~~~--------------~g~t~lh~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~----- 135 (248)
+.++. .|.||||+|+..|+.+++++|++ +|++ ++.+|..|+||||+|+..++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad------~~~~d~~g~tpLh~A~~~~~~~~~~ 201 (273)
T 2pnn_A 128 QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD------ISARDSVGNTVLHALVEVADNTVDN 201 (273)
T ss_dssp TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC------TTCCCTTSCCHHHHHHHHCCSCHHH
T ss_pred CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC------ceeeCCCCCcHHHHHHHccCcchhH
Confidence 77776 79999999999999999999999 8888 89999999999999999887
Q ss_pred ----HHHHHHHHhhccccccccccc-------ccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhh-hcCCCCCC
Q 037085 136 ----KQIVELLIRENSNRRIMIRIN-------TVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVA-QQSPQLPD 198 (248)
Q Consensus 136 ----~~~v~~Ll~~g~~~~~~~~~~-------~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~-~~~~~~~~ 198 (248)
.+++++|+++|+ +++ .+|..|+||||+|+.. ++.+++++|+++|+ ++....+.
T Consensus 202 ~~~~~~~v~~Ll~~ga------~~n~~~~~~~~~d~~g~TpL~~A~~~----g~~~iv~~Ll~~ga~dp~~~~~~ 266 (273)
T 2pnn_A 202 TKFVTSMYNEILILGA------KLHPTLKLEEITNRKGLTPLALAASS----GKIGVLAYILQREIHEPECRHAA 266 (273)
T ss_dssp HHHHHHHHHHHHHHHH------HHCTTCCGGGCCCTTSCCHHHHHHHT----TCHHHHHHHHHHHTC--------
T ss_pred HHHHHHHHHHHHHhhh------hcccccccccccCCCCCCHHHHHHHh----ChHHHHHHHHHCCCCCchhhhhh
Confidence 799999999998 665 5899999999999988 78999999999999 55554443
No 40
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.98 E-value=7.2e-33 Score=204.66 Aligned_cols=162 Identities=20% Similarity=0.227 Sum_probs=145.9
Q ss_pred hhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHH
Q 037085 11 IKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHL 90 (248)
Q Consensus 11 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~ 90 (248)
..|.+|.|+||.|+..|+.++++.|++.+.......+..|.||||+|+..|+.+++++|++.+ .+++.+|..|.||||+
T Consensus 3 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~ 81 (165)
T 3twr_A 3 MGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG-ADVHAKDKGGLVPLHN 81 (165)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHH
T ss_pred CCcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcC-CCCCccCCCCCCHHHH
Confidence 457889999999999999999999999776555778889999999999999999999999984 5588899999999999
Q ss_pred HHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHH
Q 037085 91 AVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCN 170 (248)
Q Consensus 91 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~ 170 (248)
|+..++.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+++|+ +++.+|..|.||+++|.
T Consensus 82 A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~g~t~l~~a~ 149 (165)
T 3twr_A 82 ACSYGHYEVAELLVKHGAV------VNVADLWKFTPLHEAAAKGKYEICKLLLQHGA------DPTKKNRDGNTPLDLVK 149 (165)
T ss_dssp HHHTTCHHHHHHHHHTTCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCTGGGSC
T ss_pred HHHcCcHHHHHHHHhCCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCcccCCCCCChhHhHh
Confidence 9999999999999999988 88999999999999999999999999999998 89999999999999975
Q ss_pred HcCCCchHHHHHHHHHHhhh
Q 037085 171 ANSQDSVFKEIGWIIQRAVA 190 (248)
Q Consensus 171 ~~~~~~~~~~i~~~L~~~g~ 190 (248)
. ++.+++++|++.|+
T Consensus 150 ~-----~~~~i~~~L~~~gA 164 (165)
T 3twr_A 150 D-----GDTDIQDLLRGDAA 164 (165)
T ss_dssp T-----TCHHHHHHHHTC--
T ss_pred c-----CChHHHHHHhhccc
Confidence 4 46799999998886
No 41
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.98 E-value=3.4e-32 Score=217.49 Aligned_cols=165 Identities=22% Similarity=0.289 Sum_probs=152.8
Q ss_pred hHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHH-----HhCCHHHHHHHHHhCchhhhhhcc
Q 037085 8 LASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAA-----LEGDSDVIRALVSICPESLEKLTS 82 (248)
Q Consensus 8 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~-----~~g~~~~~~~Ll~~~~~~~~~~~~ 82 (248)
.++..|.+|.||||+|+..|+.+++++|++.+....+..+..|.||||+|+ ..++.+++++|++.+ ...+..+.
T Consensus 103 ~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g-~~~~~~~~ 181 (276)
T 4hbd_A 103 VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLG-NINAKASQ 181 (276)
T ss_dssp HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHS-CTTCCCTT
T ss_pred cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcC-CCccccCC
Confidence 467889999999999999999999999999998444889999999999999 678999999999985 55677888
Q ss_pred CCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHh-hcccccccccccccCCC
Q 037085 83 NGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIR-ENSNRRIMIRINTVNKQ 161 (248)
Q Consensus 83 ~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~~~~~~ 161 (248)
.|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++ .|+ +++.+|..
T Consensus 182 ~g~tpLh~A~~~g~~~~v~~Ll~~gad------~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ga------d~~~~d~~ 249 (276)
T 4hbd_A 182 AGQTALMLAVSHGRVDVVKALLACEAD------VNVQDDDGSTALMCACEHGHKEIAGLLLAVPSC------DISLTDRD 249 (276)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTC------CTTCCCTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCC------CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC------CCcCcCCC
Confidence 999999999999999999999999998 89999999999999999999999999999 787 89999999
Q ss_pred CCCHHHHHHHcCCCchHHHHHHHHHHhh
Q 037085 162 GQTALQLCNANSQDSVFKEIGWIIQRAV 189 (248)
Q Consensus 162 g~tpl~~a~~~~~~~~~~~i~~~L~~~g 189 (248)
|+|||++|+.. ++.+++++|++++
T Consensus 250 g~TpL~~A~~~----g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 250 GSTALMVALDA----GQSEIASMLYSRM 273 (276)
T ss_dssp SCCHHHHHHHH----TCHHHHHHHHHHC
T ss_pred CCCHHHHHHHc----CCHHHHHHHHhcc
Confidence 99999999988 7899999999874
No 42
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.98 E-value=2e-31 Score=212.81 Aligned_cols=190 Identities=16% Similarity=0.167 Sum_probs=163.8
Q ss_pred cCchhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccC
Q 037085 4 LWPQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSN 83 (248)
Q Consensus 4 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~ 83 (248)
..++.....+..|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++.+ ..++..+..
T Consensus 27 ~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~ 104 (285)
T 1wdy_A 27 GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLLAAIAGSVKLLKLFLSKG-ADVNECDFY 104 (285)
T ss_dssp TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTT
T ss_pred cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCcc
Confidence 333333334788999999999999999999999999988 778999999999999999999999999984 457888999
Q ss_pred CCcHHHHHHHcCChHHHHHHHHHHhccccccccccc----------cCCCCcHhHHHHhCCcHHHHHHHHhh-ccccccc
Q 037085 84 GETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWK----------DKEGNTVLHLATLNKLKQIVELLIRE-NSNRRIM 152 (248)
Q Consensus 84 g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~----------~~~g~t~Lh~A~~~~~~~~v~~Ll~~-g~~~~~~ 152 (248)
|.||||+|+..++.+++++|+++|++ ++.. +..|.||||+|+..|+.+++++|++. |+
T Consensus 105 g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~----- 173 (285)
T 1wdy_A 105 GFTAFMEAAVYGKVKALKFLYKRGAN------VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGA----- 173 (285)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCC------TTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCC-----
T ss_pred cCCHHHHHHHhCCHHHHHHHHHhCCC------cccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCC-----
Confidence 99999999999999999999999887 4444 78899999999999999999999987 76
Q ss_pred ccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085 153 IRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 153 ~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~ 208 (248)
+++..+..|.||||+|+..+......+++++|+++|++++.....+.+ |++++.
T Consensus 174 -~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t-~L~~A~ 227 (285)
T 1wdy_A 174 -DVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKT-PLILAV 227 (285)
T ss_dssp -CTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCC-HHHHHH
T ss_pred -CCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCc-HHHHHH
Confidence 788899999999999998876666689999999999998887766554 666544
No 43
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.98 E-value=2e-32 Score=216.63 Aligned_cols=168 Identities=18% Similarity=0.173 Sum_probs=147.4
Q ss_pred ccCCCCHHHHHH---hCCCHHHHHHHHhcCcch----------hhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhh
Q 037085 13 NQRGETTMHLLS---TDGDARMVRIFGENNREL----------CLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEK 79 (248)
Q Consensus 13 ~~~g~t~L~~A~---~~g~~~~v~~Ll~~~~~~----------~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~ 79 (248)
+..|.||||+|+ ..|+.+++++|++.+.+. ....|..|.||||+|+..|+.+++++|++.+ .+++.
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~ 121 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKG-ADVHA 121 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTT-CCTTC
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCC-CCcCc
Confidence 377999999999 779999999999987642 1233458999999999999999999999985 45777
Q ss_pred hc--------------cCCCcHHHHHHHcCChHHHHHHHH---HHhccccccccccccCCCCcHhHHHHhCCc-------
Q 037085 80 LT--------------SNGETALHLAVKKSRSDAFQALVD---EAKSHRKEHLFTWKDKEGNTVLHLATLNKL------- 135 (248)
Q Consensus 80 ~~--------------~~g~t~lh~a~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~------- 135 (248)
.+ ..|.||||+|+..|+.+++++|++ +|++ ++.+|..|+||||+|+..++
T Consensus 122 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~------~~~~d~~g~TpLh~A~~~~~~~~~~~~ 195 (260)
T 3jxi_A 122 QARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD------LRRQDSRGNTVLHALVAIADNTRENTK 195 (260)
T ss_dssp CCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC------TTCCCTTSCCHHHHHHHHCCSSHHHHH
T ss_pred cccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC------CcccCCCCCcHHHHHHHhccCchhHHH
Confidence 77 579999999999999999999999 8887 89999999999999998777
Q ss_pred --HHHHHHHHhhcccccccccc-------cccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCC
Q 037085 136 --KQIVELLIRENSNRRIMIRI-------NTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLP 197 (248)
Q Consensus 136 --~~~v~~Ll~~g~~~~~~~~~-------~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 197 (248)
.+++++|+++|+ ++ +.+|..|+||||+|+.. ++.+++++|+++|++..+..+
T Consensus 196 ~~~~~v~~Ll~~ga------~~~~~~~~~~~~d~~g~tpL~~A~~~----g~~~~v~~Ll~~g~~~~~~~~ 256 (260)
T 3jxi_A 196 FVTKMYDLLLIKCA------KLFPDTNLEALLNNDGLSPLMMAAKT----GKIGIFQHIIRREIADAAAHH 256 (260)
T ss_dssp HHHHHHHHHHHHHH------HHCTTCCGGGCCCTTSCCHHHHHHHT----TCHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHhCc------ccccccchhhcccCCCCCHHHHHHHc----CCHHHHHHHHHhCCCcccccc
Confidence 799999999998 56 78999999999999988 789999999999999877544
No 44
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.98 E-value=4.1e-32 Score=225.91 Aligned_cols=193 Identities=18% Similarity=0.159 Sum_probs=166.8
Q ss_pred chhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCc--hhhhhhccC
Q 037085 6 PQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICP--ESLEKLTSN 83 (248)
Q Consensus 6 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~--~~~~~~~~~ 83 (248)
+..++..|..|.||||+|+..|+.+++++|++.++++ +.++..|.||||+|+..|+.+++++|++.+. ..++..|..
T Consensus 156 ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~ 234 (373)
T 2fo1_E 156 GADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRN 234 (373)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTT
T ss_pred CCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCC
Confidence 3345678899999999999999999999999999998 7889999999999999999999999998742 467888999
Q ss_pred CCcHHHHHHHcC---ChHHHHHHHHHHhccccc--cccccccCCCCcHhHHHHhCCcHHHHHHHHhhccccccccccccc
Q 037085 84 GETALHLAVKKS---RSDAFQALVDEAKSHRKE--HLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTV 158 (248)
Q Consensus 84 g~t~lh~a~~~~---~~~~~~~Ll~~~~~~~~~--~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~ 158 (248)
|.||||+|+..+ +.+++++|+++|++.... ...+..|..|.||||+|+..|+.+++++|++++. .+++.+
T Consensus 235 g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~-----~~~n~~ 309 (373)
T 2fo1_E 235 GMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKG-----SNKDKQ 309 (373)
T ss_dssp SCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSC-----CCTTCC
T ss_pred CCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcC-----CCccCc
Confidence 999999999988 899999999999883211 0122367799999999999999999999998873 289999
Q ss_pred CCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccccccc
Q 037085 159 NKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQT 209 (248)
Q Consensus 159 ~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 209 (248)
|..|.||||+|+.. ++.+++++|+++|++++.....+.+ +++++..
T Consensus 310 d~~g~TpL~~A~~~----g~~~iv~~Ll~~gad~~~~d~~g~t-~l~~A~~ 355 (373)
T 2fo1_E 310 DEDGKTPIMLAAQE----GRIEVVMYLIQQGASVEAVDATDHT-ARQLAQA 355 (373)
T ss_dssp CTTCCCHHHHHHHH----TCHHHHHHHHHTTCCSSCCCSSSCC-HHHHHHH
T ss_pred CCCCCCHHHHHHHc----CCHHHHHHHHHcCCCccCCCCCCCC-HHHHHHH
Confidence 99999999999988 7899999999999999888766555 7765543
No 45
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.98 E-value=4.2e-32 Score=214.40 Aligned_cols=179 Identities=17% Similarity=0.172 Sum_probs=151.7
Q ss_pred CCCCHHHHHHhCCCHH----HHHHHHhcCcchhhh----hcCCCCcHHHHHHHh---CCHHHHHHHHHhCchhhh-----
Q 037085 15 RGETTMHLLSTDGDAR----MVRIFGENNRELCLE----VDNSLMIPLHRAALE---GDSDVIRALVSICPESLE----- 78 (248)
Q Consensus 15 ~g~t~L~~A~~~g~~~----~v~~Ll~~~~~~~~~----~~~~g~t~L~~A~~~---g~~~~~~~Ll~~~~~~~~----- 78 (248)
.|+||||+|+..|+.+ ++++|++.+.++ +. .|..|.||||+|+.. |+.+++++|++.+.. .+
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i-~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~-~~~~~~~ 78 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYL-TDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKD-SGNPKPL 78 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCT-TSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHH-TTCSSCG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCc-ccchhhh
Confidence 4889999999999997 667777789887 55 799999999999999 999999999998543 33
Q ss_pred ------hhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCC-------------CCcHhHHHHhCCcHHHH
Q 037085 79 ------KLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKE-------------GNTVLHLATLNKLKQIV 139 (248)
Q Consensus 79 ------~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~-------------g~t~Lh~A~~~~~~~~v 139 (248)
..|..|.||||+|+..|+.+++++|+++|++ ++.++.. |.||||+|+..|+.+++
T Consensus 79 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v 152 (256)
T 2etb_A 79 VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD------VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVV 152 (256)
T ss_dssp GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHH
T ss_pred cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC------CCcccccccccccccccccCCCCHHHHHHHcCCHHHH
Confidence 2346799999999999999999999999988 7777765 99999999999999999
Q ss_pred HHHHh---hcccccccccccccCCCCCCHHHHHHHcCCCchHHH-------HHHHHHHhhhhc-------CCCCCCCCCc
Q 037085 140 ELLIR---ENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKE-------IGWIIQRAVAQQ-------SPQLPDAGSA 202 (248)
Q Consensus 140 ~~Ll~---~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~-------i~~~L~~~g~~~-------~~~~~~~~~~ 202 (248)
++|++ +|+ +++.+|..|+||||+|+..+. +..+ ++++|+++|+++ +.+...+.+
T Consensus 153 ~~Ll~~~~~ga------~~n~~d~~g~TpLh~A~~~~~--~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~t- 223 (256)
T 2etb_A 153 TYLLENPHQPA------SLEATDSLGNTVLHALVMIAD--NSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLT- 223 (256)
T ss_dssp HHHHHCSSCCC------CTTCCCTTSCCHHHHHHHHCC--SCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCC-
T ss_pred HHHHhccccCC------CcCccCCCCCCHHHHHHHccc--CCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCC-
Confidence 99999 887 899999999999999998422 3445 999999999999 555554444
Q ss_pred cccccccC
Q 037085 203 NVSWNQTR 210 (248)
Q Consensus 203 ~~~~~~~~ 210 (248)
|++++...
T Consensus 224 pL~~A~~~ 231 (256)
T 2etb_A 224 PLKLAAKE 231 (256)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 77766543
No 46
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=1.5e-31 Score=226.65 Aligned_cols=180 Identities=18% Similarity=0.226 Sum_probs=152.2
Q ss_pred hhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHH
Q 037085 10 SIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALH 89 (248)
Q Consensus 10 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh 89 (248)
+..+..|.||||+|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.+ ...+..+..|.||||
T Consensus 206 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~g~t~L~ 283 (437)
T 1n11_A 206 HSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA-NAESVQGVTPLHLAAQEGHAEMVALLLSKQ-ANGNLGNKSGLTPLH 283 (437)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTCCCHHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHhcC-CCCCCCCCCCCCHHH
Confidence 345566778888888888888888888877776 667778888888888888888888888874 446777888999999
Q ss_pred HHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHH
Q 037085 90 LAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLC 169 (248)
Q Consensus 90 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a 169 (248)
+|+..++.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|+ +++.+|..|+||||+|
T Consensus 284 ~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga------d~n~~~~~g~t~L~~A 351 (437)
T 1n11_A 284 LVAQEGHVPVADVLIKHGVM------VDATTRMGYTPLHVASHYGNIKLVKFLLQHQA------DVNAKTKLGYSPLHQA 351 (437)
T ss_dssp HHHHHTCHHHHHHHHHHTCC------TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTC------CTTCCCTTSCCHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCcc------CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCC------CCCCCCCCCCCHHHHH
Confidence 99999999999999998887 88899999999999999999999999999998 8999999999999999
Q ss_pred HHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085 170 NANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 170 ~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~ 208 (248)
+.. ++.+++++|+++|++++....++.+ |++.+.
T Consensus 352 ~~~----g~~~iv~~Ll~~ga~~~~~~~~g~t-~l~~A~ 385 (437)
T 1n11_A 352 AQQ----GHTDIVTLLLKNGASPNEVSSDGTT-PLAIAK 385 (437)
T ss_dssp HHT----TCHHHHHHHHHTTCCSCCCCSSSCC-HHHHHH
T ss_pred HHC----ChHHHHHHHHHCcCCCCCCCCCCCC-HHHHHH
Confidence 988 7889999999999999887776655 665543
No 47
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=1.3e-31 Score=195.52 Aligned_cols=151 Identities=25% Similarity=0.261 Sum_probs=140.8
Q ss_pred CCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcC
Q 037085 16 GETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKS 95 (248)
Q Consensus 16 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~ 95 (248)
..++||.|+..|+.+++++|++.+.+. . .+..|.||||+|+..|+.+++++|++.+ ..++.++..|.||||+|+..+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 78 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGHFSTTEVLLRAG-VSRDARTKVDRTPLHMAASEG 78 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHHT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcC
Confidence 468999999999999999999999876 2 5889999999999999999999999984 557888999999999999999
Q ss_pred ChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCC
Q 037085 96 RSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQD 175 (248)
Q Consensus 96 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~ 175 (248)
+.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+++|+ +++.+|..|.||+++|+..
T Consensus 79 ~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~g~t~l~~A~~~--- 143 (153)
T 1awc_B 79 HANIVEVLLKHGAD------VNAKDMLKMTALHWATEHNHQEVVELLIKYGA------DVHTQSKFCKTAFDISIDN--- 143 (153)
T ss_dssp CHHHHHHHHTTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHT---
T ss_pred hHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CccccCCCCCCHHHHHHHc---
Confidence 99999999999888 88999999999999999999999999999998 8999999999999999988
Q ss_pred chHHHHHHHH
Q 037085 176 SVFKEIGWII 185 (248)
Q Consensus 176 ~~~~~i~~~L 185 (248)
++.+++++|
T Consensus 144 -~~~~i~~~L 152 (153)
T 1awc_B 144 -GNEDLAEIL 152 (153)
T ss_dssp -TCHHHHHHH
T ss_pred -CCHHHHHHh
Confidence 778888876
No 48
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=4.1e-31 Score=211.06 Aligned_cols=182 Identities=19% Similarity=0.242 Sum_probs=119.7
Q ss_pred HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhh--------
Q 037085 9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKL-------- 80 (248)
Q Consensus 9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~-------- 80 (248)
.+..+..|.||||+|+..|+.+++++|++++.++ +..+..|.||||+|+..|+.+++++|++.+.. ++..
T Consensus 65 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~~~~~ 142 (285)
T 1wdy_A 65 PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAVYGKVKALKFLYKRGAN-VNLRRKTKEDQE 142 (285)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCCCHHHH
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCcccCCHHHHHHHhCCHHHHHHHHHhCCC-cccccccHHHHH
Confidence 4455667777777777777777777777777766 56667777777777777777777777776432 3332
Q ss_pred --ccCCCcHHHHHHHcCChHHHHHHHHH-HhccccccccccccCCCCcHhHHHHhCCc----HHHHHHHHhhcccccccc
Q 037085 81 --TSNGETALHLAVKKSRSDAFQALVDE-AKSHRKEHLFTWKDKEGNTVLHLATLNKL----KQIVELLIRENSNRRIMI 153 (248)
Q Consensus 81 --~~~g~t~lh~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~----~~~v~~Ll~~g~~~~~~~ 153 (248)
+..|.||||+|+..++.+++++|++. +.+ ++..|..|.||||+|+..++ .+++++|+++|+
T Consensus 143 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~------~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~------ 210 (285)
T 1wdy_A 143 RLRKGGATALMDAAEKGHVEVLKILLDEMGAD------VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGA------ 210 (285)
T ss_dssp HTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCC------TTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTC------
T ss_pred hhccCCCcHHHHHHHcCCHHHHHHHHHhcCCC------CCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCC------
Confidence 55667777777777777777777765 555 56666666666666666666 666666666665
Q ss_pred cccccCCCCCCHHHHHHHcCCCchHHHHHHHHHH-hhhhcCCCCCCCCCcccccccc
Q 037085 154 RINTVNKQGQTALQLCNANSQDSVFKEIGWIIQR-AVAQQSPQLPDAGSANVSWNQT 209 (248)
Q Consensus 154 ~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~-~g~~~~~~~~~~~~~~~~~~~~ 209 (248)
+++.+|..|.||||+|+.. ++.+++++|++ .|++++.....+.+ |++.+..
T Consensus 211 ~~~~~~~~g~t~L~~A~~~----~~~~~v~~Ll~~~g~~~~~~~~~g~t-~l~~A~~ 262 (285)
T 1wdy_A 211 DVNVRGERGKTPLILAVEK----KHLGLVQRLLEQEHIEINDTDSDGKT-ALLLAVE 262 (285)
T ss_dssp CSSCCCTTSCCHHHHHHHT----TCHHHHHHHHHSSSCCTTCCCTTSCC-HHHHHHH
T ss_pred CCCCcCCCCCcHHHHHHHc----CCHHHHHHHHhccCCCccccCCCCCc-HHHHHHH
Confidence 5666666666666666665 55666666666 66666655554443 5554443
No 49
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=5.7e-32 Score=215.64 Aligned_cols=202 Identities=16% Similarity=0.181 Sum_probs=158.0
Q ss_pred hHhhhccCCCCHHHHHHhCCCHHHHHHHHhc----Ccchh---hhhcCCCCcHHHHHHHh---CCHHHHHHHHHhCchh-
Q 037085 8 LASIKNQRGETTMHLLSTDGDARMVRIFGEN----NRELC---LEVDNSLMIPLHRAALE---GDSDVIRALVSICPES- 76 (248)
Q Consensus 8 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~----~~~~~---~~~~~~g~t~L~~A~~~---g~~~~~~~Ll~~~~~~- 76 (248)
.....|..|.||||+|+..|+.++++.|++. +..+. ...+..|.||||+|+.. |+.+++++|++.+...
T Consensus 5 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~ 84 (273)
T 2pnn_A 5 GEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTD 84 (273)
T ss_dssp ------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTT
T ss_pred cCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcccc
Confidence 3456789999999999999999999988874 33331 24588999999999987 9999999999985421
Q ss_pred -----hhh----hccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccC--------------CCCcHhHHHHhC
Q 037085 77 -----LEK----LTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDK--------------EGNTVLHLATLN 133 (248)
Q Consensus 77 -----~~~----~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~--------------~g~t~Lh~A~~~ 133 (248)
++. .|..|.||||+|+..|+.+++++|+++|++ ++.++. .|.||||+|+..
T Consensus 85 ~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~------~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~ 158 (273)
T 2pnn_A 85 SLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD------VQAAANGDFFKKTKGRPGFYFGELPLSLAACT 158 (273)
T ss_dssp CHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHT
T ss_pred chhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC------cCccccccccccccccccccCCCCHHHHHHHc
Confidence 222 566899999999999999999999999988 777776 799999999999
Q ss_pred CcHHHHHHHHh---hcccccccccccccCCCCCCHHHHHHHcCCCch-----HHHHHHHHHHhhhhcCC-------CCCC
Q 037085 134 KLKQIVELLIR---ENSNRRIMIRINTVNKQGQTALQLCNANSQDSV-----FKEIGWIIQRAVAQQSP-------QLPD 198 (248)
Q Consensus 134 ~~~~~v~~Ll~---~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~-----~~~i~~~L~~~g~~~~~-------~~~~ 198 (248)
|+.+++++|++ +|+ +++.+|..|+||||+|+..+.... ..+++++|+++|++++. ....
T Consensus 159 g~~~~v~~Ll~~~~~ga------d~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~ 232 (273)
T 2pnn_A 159 NQLAIVKFLLQNSWQPA------DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRK 232 (273)
T ss_dssp TCHHHHHHHHHCSSCCC------CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTT
T ss_pred CCHHHHHHHHhcccCCC------CceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCC
Confidence 99999999999 787 899999999999999998643211 16899999999999985 3333
Q ss_pred CCCccccccccCCchhhhhhHHHHHHHHHH
Q 037085 199 AGSANVSWNQTRWPIETRNVLLMVVVTIAA 228 (248)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 228 (248)
+.+|++++.... ...++..|+..
T Consensus 233 -g~TpL~~A~~~g------~~~iv~~Ll~~ 255 (273)
T 2pnn_A 233 -GLTPLALAASSG------KIGVLAYILQR 255 (273)
T ss_dssp -SCCHHHHHHHTT------CHHHHHHHHHH
T ss_pred -CCCHHHHHHHhC------hHHHHHHHHHC
Confidence 444887665332 34455555443
No 50
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=6.5e-31 Score=222.79 Aligned_cols=179 Identities=17% Similarity=0.205 Sum_probs=144.1
Q ss_pred hHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcH
Q 037085 8 LASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETA 87 (248)
Q Consensus 8 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~ 87 (248)
.++..+..|.||||+|+..|+.++|++|++++.++ +..+..|.||||+|+..|+.+++++|++.+ ..++.++..|.||
T Consensus 6 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~ 83 (437)
T 1n11_A 6 SGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASP-NVSNVKVETPLHMAARAGHTEVAKYLLQNK-AKVNAKAKDDQTP 83 (437)
T ss_dssp ---------CCHHHHHHHHTCHHHHHHHHHTTCCS-CCSSSCCCCHHHHHHHHTCHHHHHHHHHHT-CCSSCCCTTSCCH
T ss_pred CccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCCH
Confidence 45677888999999999999999999999999887 678889999999999999999999999984 4578888899999
Q ss_pred HHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHH
Q 037085 88 LHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQ 167 (248)
Q Consensus 88 lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~ 167 (248)
||+|+..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|++.++ +.+..+..|.||||
T Consensus 84 L~~A~~~g~~~~v~~Ll~~ga~------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~------~~~~~~~~g~t~L~ 151 (437)
T 1n11_A 84 LHCAARIGHTNMVKLLLENNAN------PNLATTAGHTPLHIAAREGHVETVLALLEKEA------SQACMTKKGFTPLH 151 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCC------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC------CSCCCCTTSCCHHH
T ss_pred HHHHHHCCCHHHHHHHHhCCCC------CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC------CCcCCCCCCCCHHH
Confidence 9999999999999999999887 77788888888888888888888888888876 66777778888888
Q ss_pred HHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccc
Q 037085 168 LCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVS 205 (248)
Q Consensus 168 ~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~ 205 (248)
+|+.. ++.+++++|+++|++++.....+.+ +++
T Consensus 152 ~A~~~----g~~~~v~~Ll~~g~~~~~~~~~g~t-~L~ 184 (437)
T 1n11_A 152 VAAKY----GKVRVAELLLERDAHPNAAGKNGLT-PLH 184 (437)
T ss_dssp HHHHT----TCHHHHHHHHHTTCCTTCCCSSCCC-HHH
T ss_pred HHHHc----CCHHHHHHHHhCCCCCCCCCCCCCC-HHH
Confidence 88877 6778888888888877766554443 444
No 51
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=3.4e-31 Score=216.65 Aligned_cols=181 Identities=19% Similarity=0.092 Sum_probs=147.7
Q ss_pred hHhh-hccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCC---HHHHHHHHHhCchhhhhhccC
Q 037085 8 LASI-KNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGD---SDVIRALVSICPESLEKLTSN 83 (248)
Q Consensus 8 ~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~---~~~~~~Ll~~~~~~~~~~~~~ 83 (248)
.++. .|..|.||||+|+..|+.+++++|+++++++ +.+|..|.||||+|+..|+ .++++.|++.+...++.+|..
T Consensus 122 dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~ 200 (327)
T 1sw6_A 122 NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSM 200 (327)
T ss_dssp CSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTT
T ss_pred CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCC
Confidence 3455 7899999999999999999999999999998 7899999999999999998 788888888865678899999
Q ss_pred CCcHHHHHHH----cCChHHHHHHHHHHhccc--------------cccccccccCCCCcHhHHHHhCCcHHHHHHHHhh
Q 037085 84 GETALHLAVK----KSRSDAFQALVDEAKSHR--------------KEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRE 145 (248)
Q Consensus 84 g~t~lh~a~~----~~~~~~~~~Ll~~~~~~~--------------~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~ 145 (248)
|.||||+|+. .|+.+++++|++.+.... ....++.++..|.||||+|+. +++|+++
T Consensus 201 g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~ 274 (327)
T 1sw6_A 201 NRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN 274 (327)
T ss_dssp CCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH
T ss_pred CCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh
Confidence 9999999999 899999999998843110 022378899999999999985 8889886
Q ss_pred cccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085 146 NSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 146 g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~ 208 (248)
+++.+|..|+||||+|+.. ++.+++++|+++|++++.+...+.+ |++++.
T Consensus 275 --------~~n~~d~~G~TpLh~A~~~----g~~~~v~~Ll~~Gad~~~~d~~G~T-pL~~A~ 324 (327)
T 1sw6_A 275 --------MLNAQDSNGDTCLNIAARL----GNISIVDALLDYGADPFIANKSGLR-PVDFGA 324 (327)
T ss_dssp --------TTTCCCTTSCCHHHHHHHH----CCHHHHHHHHHTTCCTTCCCTTSCC-GGGGTC
T ss_pred --------CCCCCCCCCCCHHHHHHHc----CCHHHHHHHHHcCCCCcccCCCCCC-HHHHHH
Confidence 4788999999999999988 7889999999999999988877665 877654
No 52
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=3.7e-31 Score=193.58 Aligned_cols=154 Identities=19% Similarity=0.204 Sum_probs=141.4
Q ss_pred CCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcC
Q 037085 16 GETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKS 95 (248)
Q Consensus 16 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~ 95 (248)
+.|+||.|+..|+.++++.|++......+..+..|.||||+ +..|+.+++++|++.+ .+++.+|..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQG-ASPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcC
Confidence 56899999999999999999999332337789999999999 9999999999999984 558889999999999999999
Q ss_pred ChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCC
Q 037085 96 RSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQD 175 (248)
Q Consensus 96 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~ 175 (248)
+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++. + +++.+|..|.|||++|+..
T Consensus 80 ~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~------~~~~~~~~g~t~l~~A~~~--- 143 (156)
T 1bd8_A 80 FLDTLKVLVEHGAD------VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-S------DLHRRDARGLTPLELALQR--- 143 (156)
T ss_dssp CHHHHHHHHHTTCC------SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-S------CTTCCCTTSCCHHHHHHHS---
T ss_pred cHHHHHHHHHcCCC------CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-c------CCCCcCCCCCCHHHHHHHc---
Confidence 99999999999988 889999999999999999999999999998 6 7899999999999999988
Q ss_pred chHHHHHHHHHHh
Q 037085 176 SVFKEIGWIIQRA 188 (248)
Q Consensus 176 ~~~~~i~~~L~~~ 188 (248)
++.+++++|+++
T Consensus 144 -~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 144 -GAQDLVDILQGH 155 (156)
T ss_dssp -CCHHHHHHHHTT
T ss_pred -CcHHHHHHHHhh
Confidence 788999999864
No 53
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=4e-31 Score=212.22 Aligned_cols=162 Identities=18% Similarity=0.084 Sum_probs=149.8
Q ss_pred CCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCC-CcHHHHHHH
Q 037085 15 RGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNG-ETALHLAVK 93 (248)
Q Consensus 15 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g-~t~lh~a~~ 93 (248)
+|.||||+|+..|+.+++++|++.++++ +.++..|.||||+|+..|+.+++++|++. +.+++.++..| .||||+|+.
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~~t~L~~A~~ 138 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTALYYAVDSGNMQTVKLFVKK-NWRLMFYGKTGWKTSFYHAVM 138 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHH-CGGGGGCSSSGGGSHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCCccCCCCCCCHHHHHHH
Confidence 5999999999999999999999999998 77899999999999999999999999999 55688889999 899999999
Q ss_pred cCChHHHHHHHHHHhccccccccccccC-CCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCH-HHHHHH
Q 037085 94 KSRSDAFQALVDEAKSHRKEHLFTWKDK-EGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTA-LQLCNA 171 (248)
Q Consensus 94 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~-~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tp-l~~a~~ 171 (248)
.|+.+++++|+++|++ . .+. .|.||||+|+..|+.+++++|+++|+ +++.+|..|+|| ||+|+.
T Consensus 139 ~~~~~~v~~Ll~~g~~------~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga------d~n~~~~~g~t~~L~~A~~ 204 (285)
T 3kea_A 139 LNDVSIVSYFLSEIPS------T--FDLAILLSCIHITIKNGHVDMMILLLDYMT------STNTNNSLLFIPDIKLAID 204 (285)
T ss_dssp TTCHHHHHHHHTTSCT------T--CCCSTHHHHHHHHHHTTCHHHHHHHHHHHH------HTCTTCCCBCCTTHHHHHH
T ss_pred cCCHHHHHHHHhCCCc------c--ccccCCccHHHHHHHcChHHHHHHHHHcCC------CCCcccCCCCChHHHHHHH
Confidence 9999999999999865 2 233 89999999999999999999999998 899999999998 999998
Q ss_pred cCCCchHHHHHHHHHHhhhhcCCCC
Q 037085 172 NSQDSVFKEIGWIIQRAVAQQSPQL 196 (248)
Q Consensus 172 ~~~~~~~~~i~~~L~~~g~~~~~~~ 196 (248)
. ++.+++++|+++|++++...
T Consensus 205 ~----~~~~~v~~Ll~~gad~~~~~ 225 (285)
T 3kea_A 205 N----KDIEMLQALFKYDINIYSAN 225 (285)
T ss_dssp H----TCHHHHHHHTTSCBCSTTTT
T ss_pred c----CCHHHHHHHHHcCCCCCCCC
Confidence 7 78999999999999988765
No 54
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=1.4e-30 Score=202.95 Aligned_cols=181 Identities=17% Similarity=0.172 Sum_probs=116.2
Q ss_pred HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHH
Q 037085 9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETAL 88 (248)
Q Consensus 9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l 88 (248)
++..+..|.||||+|+..|+.+++++|++.+.+.....+..|.||||+|+..|+.+++++|++. +..++..+..|.|||
T Consensus 35 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l 113 (240)
T 3eu9_A 35 VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKY-GADPSLIDGEGCSCI 113 (240)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHH
Confidence 3445566666666666666666666666666665444444566666666666666666666665 333555566666666
Q ss_pred HHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCc-HHHHHHHHhhcccccccccccccCC-CCCCHH
Q 037085 89 HLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKL-KQIVELLIRENSNRRIMIRINTVNK-QGQTAL 166 (248)
Q Consensus 89 h~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~-~~~v~~Ll~~g~~~~~~~~~~~~~~-~g~tpl 166 (248)
|+|+..++.+++++|+++|++ ++.++..|.||||+|+..++ .+++++|++.|+ +++..+. .|.|||
T Consensus 114 ~~A~~~~~~~~~~~Ll~~~~~------~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~------~~~~~~~~~g~t~L 181 (240)
T 3eu9_A 114 HLAAQFGHTSIVAYLIAKGQD------VDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNV------SVNLGDKYHKNTAL 181 (240)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTC------CTTCCCTTTCCCHH
T ss_pred HHHHHcCHHHHHHHHHhcCCC------ccccCCCCCcHHHHHHHhCChHHHHHHHHhcCC------CcchhhccCCCcHH
Confidence 666666666666666666655 56666666666666664443 566666666665 5666665 677777
Q ss_pred HHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccccc
Q 037085 167 QLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWN 207 (248)
Q Consensus 167 ~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~ 207 (248)
|+|+.. +..+++++|+++|++++.....+.+ |++.+
T Consensus 182 ~~A~~~----~~~~~v~~Ll~~g~~~~~~~~~g~t-~l~~A 217 (240)
T 3eu9_A 182 HWAVLA----GNTTVISLLLEAGANVDAQNIKGES-ALDLA 217 (240)
T ss_dssp HHHHHH----TCHHHHHHHHHHTCCTTCBCTTSCB-HHHHH
T ss_pred HHHHHc----CCHHHHHHHHHcCCCCCCcCCCCCC-HHHHH
Confidence 777766 5677777777777777666554443 55444
No 55
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=9.7e-31 Score=193.92 Aligned_cols=133 Identities=23% Similarity=0.391 Sum_probs=124.7
Q ss_pred hhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCc
Q 037085 7 QLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGET 86 (248)
Q Consensus 7 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t 86 (248)
..++.+|.+|.||||+|+..++.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|++.+ .+++.+|..|+|
T Consensus 28 advn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-advn~~d~~G~T 105 (169)
T 4gpm_A 28 ADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNAKDSDGRT 105 (169)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCC
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCCHHHHHHHHHCc-CCCCCCCCCCCC
Confidence 346788999999999999999999999999999998 889999999999999999999999999985 568899999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcc
Q 037085 87 ALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENS 147 (248)
Q Consensus 87 ~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~ 147 (248)
|||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 106 pLh~A~~~g~~~~v~~Ll~~gad------~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 160 (169)
T 4gpm_A 106 PLHHAAENGHKEVVKLLISKGAD------VNTSDSDGRTPLDLAREHGNEEVVKLLEKQGG 160 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC--
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC------ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 99999999999999999999988 88999999999999999999999999999999
No 56
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=3.6e-30 Score=211.22 Aligned_cols=186 Identities=17% Similarity=0.153 Sum_probs=153.9
Q ss_pred ccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhc-CCCCcHHHHHHHhCCHHHHHHHHHhCch----------------
Q 037085 13 NQRGETTMHLLSTDGDARMVRIFGENNRELCLEVD-NSLMIPLHRAALEGDSDVIRALVSICPE---------------- 75 (248)
Q Consensus 13 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~g~~~~~~~Ll~~~~~---------------- 75 (248)
+.+|.|+||.|+..|+.++|++|+++|+++ +.++ ..|.||||+|+..|+.+++++|++++..
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~Gadv-n~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~ 100 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEGGANV-NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAA 100 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCC-CccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHH
Confidence 445789999999999999999999999998 5454 4699999999999999999999997542
Q ss_pred ----------------hhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccc----cccccccCCCCcHhHHHHhCCc
Q 037085 76 ----------------SLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKE----HLFTWKDKEGNTVLHLATLNKL 135 (248)
Q Consensus 76 ----------------~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~----~~~~~~~~~g~t~Lh~A~~~~~ 135 (248)
.++..|..|.||||+|+..++.+++++|+++|++.... ......+..|.||||+|+..|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~ 180 (337)
T 4g8k_A 101 IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH 180 (337)
T ss_dssp HHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTC
T ss_pred hcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCC
Confidence 23456788999999999999999999999998874311 1233456789999999999999
Q ss_pred HHHHHHHHhh-cccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccc
Q 037085 136 KQIVELLIRE-NSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSW 206 (248)
Q Consensus 136 ~~~v~~Ll~~-g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~ 206 (248)
.+++++|+++ |+ +++.+|..|.||++.++..+.......++++|+++|++++.+...+.+ |+++
T Consensus 181 ~~~v~~LL~~~ga------d~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t-~L~~ 245 (337)
T 4g8k_A 181 VEVLKILLDEMGA------DVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKT-PLIL 245 (337)
T ss_dssp HHHHHHHHHHSCC------CTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCC-HHHH
T ss_pred HHHHHHHHhccCC------CcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCC-HHHH
Confidence 9999999964 66 899999999999999888777777788999999999999887765554 6553
No 57
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=2.5e-30 Score=212.49 Aligned_cols=133 Identities=17% Similarity=0.162 Sum_probs=121.0
Q ss_pred HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHH
Q 037085 9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETAL 88 (248)
Q Consensus 9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l 88 (248)
....+..|.++||.|+..|+.+.++.|+.......+.+|..|.||||+|+..|+.+++++|++.+ .+++.+|..|.|||
T Consensus 17 ~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L 95 (351)
T 3utm_A 17 AVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHG-ADVHAKDKGGLVPL 95 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHH
T ss_pred eeeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCcHH
Confidence 45667889999999999999999999998754444788999999999999999999999999984 55888999999999
Q ss_pred HHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhccc
Q 037085 89 HLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSN 148 (248)
Q Consensus 89 h~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~ 148 (248)
|+|+..|+.+++++|+++|++ ++..|..|.||||+|+..|+.+++++|+++|++
T Consensus 96 ~~A~~~g~~~iv~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 149 (351)
T 3utm_A 96 HNACSYGHYEVTELLLKHGAC------VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGAD 149 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHCCCHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999988 888999999999999999999999999998774
No 58
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=7.2e-30 Score=211.53 Aligned_cols=168 Identities=17% Similarity=0.174 Sum_probs=152.1
Q ss_pred ccCCCCHHHHHHhCCCHHHHHHHHhc----Ccchhhh-----------------hcCCCCcHHHHHHHhC--CHHHHHHH
Q 037085 13 NQRGETTMHLLSTDGDARMVRIFGEN----NRELCLE-----------------VDNSLMIPLHRAALEG--DSDVIRAL 69 (248)
Q Consensus 13 ~~~g~t~L~~A~~~g~~~~v~~Ll~~----~~~~~~~-----------------~~~~g~t~L~~A~~~g--~~~~~~~L 69 (248)
+.+|.||||+|+..|+.+++++|++. +.++ +. .+..|.||||+|+..| +.+++++|
T Consensus 81 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~L 159 (364)
T 3ljn_A 81 LWHGQKPIHLAVMANKTDLVVALVEGAKERGQMP-ESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKIL 159 (364)
T ss_dssp CBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCH-HHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCH-HHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHH
Confidence 35899999999999999999999998 6665 44 7889999999999999 99999999
Q ss_pred HHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccc
Q 037085 70 VSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNR 149 (248)
Q Consensus 70 l~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~ 149 (248)
++. +.+++.+|..|.||||+|+..|+.+++++|+++|++. ....++..|..|.||||+|+..|+.+++++|+++|+
T Consensus 160 l~~-ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-- 235 (364)
T 3ljn_A 160 VQL-GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSK-SSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGI-- 235 (364)
T ss_dssp HHH-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCS-SSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTC--
T ss_pred HHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccc-ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC--
Confidence 999 4568889999999999999999999999999998762 122367889999999999999999999999999998
Q ss_pred cccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcC
Q 037085 150 RIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQS 193 (248)
Q Consensus 150 ~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~ 193 (248)
|++.+|..|.||||+|+.. ++.+++++|+++|++..
T Consensus 236 ----d~~~~d~~g~tpL~~A~~~----g~~~~v~~Ll~~~~~~~ 271 (364)
T 3ljn_A 236 ----DVNMEDNEHTVPLYLSVRA----AMVLLTKELLQKTDVFL 271 (364)
T ss_dssp ----CTTCCCTTSCCHHHHHHHT----CCHHHHHHHHHHSCHHH
T ss_pred ----CCCCCCCCCCCHHHHHHHh----ChHHHHHHHHHcCCchh
Confidence 8999999999999999988 78999999999998863
No 59
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=7.8e-31 Score=207.50 Aligned_cols=198 Identities=16% Similarity=0.194 Sum_probs=156.0
Q ss_pred ccCCCCHHHHHHhCCCHHHHHHHHh----cCcchhhhh----cCCCCcHHHHHH---HhCCHHHHHHHHHhCchh-----
Q 037085 13 NQRGETTMHLLSTDGDARMVRIFGE----NNRELCLEV----DNSLMIPLHRAA---LEGDSDVIRALVSICPES----- 76 (248)
Q Consensus 13 ~~~g~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~----~~~g~t~L~~A~---~~g~~~~~~~Ll~~~~~~----- 76 (248)
+..|+++||.|+..|+.+.++.|++ .+.++ ... +..|.||||+|+ ..|+.+++++|++.+...
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRL-TDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCT-TSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCc-chhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 5678999999999999996555554 78776 333 377999999999 679999999999985321
Q ss_pred -----hhhhccCCCcHHHHHHHcCChHHHHHHHHHHhcccccccccccc--------------CCCCcHhHHHHhCCcHH
Q 037085 77 -----LEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKD--------------KEGNTVLHLATLNKLKQ 137 (248)
Q Consensus 77 -----~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~--------------~~g~t~Lh~A~~~~~~~ 137 (248)
.+..|..|.||||+|+..|+.+++++|+++|++ ++.++ ..|.||||+|+..|+.+
T Consensus 81 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~ 154 (260)
T 3jxi_A 81 FINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD------VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPH 154 (260)
T ss_dssp HHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHH
T ss_pred hhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC------cCccccccccCcccccccccCCCCHHHHHHHcCCHH
Confidence 233455899999999999999999999999988 77777 68999999999999999
Q ss_pred HHHHHHh---hcccccccccccccCCCCCCHHHHHHHcCCCc-----hHHHHHHHHHHhhhhcCC-------CCCCCCCc
Q 037085 138 IVELLIR---ENSNRRIMIRINTVNKQGQTALQLCNANSQDS-----VFKEIGWIIQRAVAQQSP-------QLPDAGSA 202 (248)
Q Consensus 138 ~v~~Ll~---~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~-----~~~~i~~~L~~~g~~~~~-------~~~~~~~~ 202 (248)
++++|++ .|+ +++.+|..|+||||+|+..+... ...+++++|+++|+++++ ....+ .+
T Consensus 155 ~v~~Ll~~~~~ga------~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g-~t 227 (260)
T 3jxi_A 155 IVHYLTENGHKQA------DLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDG-LS 227 (260)
T ss_dssp HHHHHHHCSSCCC------CTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTS-CC
T ss_pred HHHHHHhccccCC------CCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCC-CC
Confidence 9999999 777 89999999999999999764321 126899999999999954 33333 34
Q ss_pred cccccccCCchhhhhhHHHHHHHHHHHH
Q 037085 203 NVSWNQTRWPIETRNVLLMVVVTIAAAF 230 (248)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~li~~~~ 230 (248)
|++++... +...++..|+.-..
T Consensus 228 pL~~A~~~------g~~~~v~~Ll~~g~ 249 (260)
T 3jxi_A 228 PLMMAAKT------GKIGIFQHIIRREI 249 (260)
T ss_dssp HHHHHHHT------TCHHHHHHHHHHHH
T ss_pred HHHHHHHc------CCHHHHHHHHHhCC
Confidence 77665533 33445555554333
No 60
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=5e-30 Score=199.87 Aligned_cols=183 Identities=16% Similarity=0.138 Sum_probs=163.3
Q ss_pred hhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHH
Q 037085 10 SIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALH 89 (248)
Q Consensus 10 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh 89 (248)
+..|..|.|+||.|+..|+.++++.|++.+.++ +..+..|.||||+|+..|+.+++++|++.+.......+..|.||||
T Consensus 3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 3 THIDDYSTWDIVKATQYGIYERCRELVEAGYDV-RQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLH 81 (240)
T ss_dssp CCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred cccccccchHHHHHHHcCChHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence 345788999999999999999999999999887 7889999999999999999999999999976655555666999999
Q ss_pred HHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHH
Q 037085 90 LAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLC 169 (248)
Q Consensus 90 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a 169 (248)
+|+..++.+++++|++.|++ ++..+..|.||||+|+..++.+++++|+++|+ +++.++..|.||||+|
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~------~~~~~~~~g~t~l~~a 149 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGAD------PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQ------DVDMMDQNGMTPLMWA 149 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCC------CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCC------CccccCCCCCcHHHHH
Confidence 99999999999999999888 78899999999999999999999999999997 7899999999999999
Q ss_pred HHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085 170 NANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 170 ~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~ 208 (248)
+..+ ...+++++|++.|++++......+.++++++.
T Consensus 150 ~~~~---~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~ 185 (240)
T 3eu9_A 150 AYRT---HSVDPTRLLLTFNVSVNLGDKYHKNTALHWAV 185 (240)
T ss_dssp HHHC---CSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHH
T ss_pred HHhC---ChHHHHHHHHhcCCCcchhhccCCCcHHHHHH
Confidence 9663 23688999999999999887755555776554
No 61
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=8.3e-31 Score=205.14 Aligned_cols=166 Identities=16% Similarity=0.156 Sum_probs=120.0
Q ss_pred ccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHH
Q 037085 13 NQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAV 92 (248)
Q Consensus 13 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~ 92 (248)
+..|.||||.|+..++.++++.|++++.++. .+..|.||||.|+..|+.+++++|++.+. +++.+|..|.||||+|+
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~--~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~d~~g~t~L~~A~ 78 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVK--FNPLPLALLLDSSLEGEFDLVQRIIYEVD-DPSLPNDEGITALHNAV 78 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTS-SCCCCCTTSCCHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcc--cCchhhHHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHHH
Confidence 4679999999999999999999999999883 34778999999999999999999999855 68889999999999999
Q ss_pred HcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCC-CHHHHHHH
Q 037085 93 KKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQ-TALQLCNA 171 (248)
Q Consensus 93 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~-tpl~~a~~ 171 (248)
..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|+ +++.++..|. ||+|+|..
T Consensus 79 ~~g~~~~v~~Ll~~ga~------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~~~~t~l~~a~~ 146 (239)
T 1ycs_B 79 CAGHTEIVKFLVQFGVN------VNAADSDGWTPLHCAASCNNVQVCKFLVESGA------AVFAMTYSDMQTAADKCEE 146 (239)
T ss_dssp HHTCHHHHHHHHHHTCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCSSSCCCHHHHCCS
T ss_pred HcCCHHHHHHHHHcCCC------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CcceecCCCCcchHHHHHH
Confidence 99999999999999988 89999999999999999999999999999998 8899998877 99999832
Q ss_pred cCCCchHHHHHHHHHHhhhhcCCC
Q 037085 172 NSQDSVFKEIGWIIQRAVAQQSPQ 195 (248)
Q Consensus 172 ~~~~~~~~~i~~~L~~~g~~~~~~ 195 (248)
. ..++.+++++|+++|++++..
T Consensus 147 ~--~~g~~~~~~~Ll~~~a~~~~~ 168 (239)
T 1ycs_B 147 M--EEGYTQCSQFLYGVQEKMGIM 168 (239)
T ss_dssp S--STTCCCHHHHHHHHHHHTTTT
T ss_pred h--hhccHHHHHHHHHhhhccccc
Confidence 1 337789999999999998765
No 62
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.96 E-value=1.7e-29 Score=207.19 Aligned_cols=173 Identities=20% Similarity=0.217 Sum_probs=152.0
Q ss_pred hHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchh---------hhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhh
Q 037085 8 LASIKNQRGETTMHLLSTDGDARMVRIFGENNRELC---------LEVDNSLMIPLHRAALEGDSDVIRALVSICPESLE 78 (248)
Q Consensus 8 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~---------~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~ 78 (248)
.++..|..|.||||+|+..|+.+++++|++.++++. ...+..|.||||+|+..|+.+++++||++.+.+++
T Consensus 117 ~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n 196 (337)
T 4g8k_A 117 DVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN 196 (337)
T ss_dssp CTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTT
T ss_pred hhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcC
Confidence 356778999999999999999999999999988662 23355789999999999999999999987677789
Q ss_pred hhccCCCcHHHHHHHcCC----hHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhccccccccc
Q 037085 79 KLTSNGETALHLAVKKSR----SDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIR 154 (248)
Q Consensus 79 ~~~~~g~t~lh~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~ 154 (248)
.+|..|.|++|.++..+. ..++++|+++|++ ++.+|..|+||||+|+..|+.++++.|++.+. ++
T Consensus 197 ~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad------~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~-----~~ 265 (337)
T 4g8k_A 197 ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD------VNVRGERGKTPLILAVEKKHLGLVQRLLEQEH-----IE 265 (337)
T ss_dssp CCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC------TTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTT-----CC
T ss_pred ccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC------CCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcC-----Cc
Confidence 999999999999876654 3578999999988 88999999999999999999999999998632 38
Q ss_pred ccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCC
Q 037085 155 INTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQ 195 (248)
Q Consensus 155 ~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~ 195 (248)
++.+|..|+||||+|+.. ++.+++++|+++|++++..
T Consensus 266 vn~~d~~G~TpL~~A~~~----g~~~iv~~Ll~~GAd~n~~ 302 (337)
T 4g8k_A 266 INDTDSDGKTALLLAVEL----KLKKIAELLCKRGASTDCG 302 (337)
T ss_dssp TTCBCTTSCBHHHHHHHT----TCHHHHHHHHTTSCSSTTC
T ss_pred ccCcCCCCCCHHHHHHHc----CCHHHHHHHHHCCCCCCCC
Confidence 999999999999999988 7899999999999988654
No 63
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=3.4e-30 Score=214.37 Aligned_cols=167 Identities=24% Similarity=0.278 Sum_probs=149.4
Q ss_pred hHhhhccCCCCHHHHHHhCCCHHHHHHHHhcC---cchhhhhcCCCCcHHHHHHHhC---CHHHHHHHHHhCchhhhh--
Q 037085 8 LASIKNQRGETTMHLLSTDGDARMVRIFGENN---RELCLEVDNSLMIPLHRAALEG---DSDVIRALVSICPESLEK-- 79 (248)
Q Consensus 8 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~---~~~~~~~~~~g~t~L~~A~~~g---~~~~~~~Ll~~~~~~~~~-- 79 (248)
.++..|..|.||||+|+..|+.+++++|++.+ .++ +..+..|.||||+|+..+ +.+++++|++.+.+ ++.
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~-~~~~~ 268 (373)
T 2fo1_E 191 DPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI-EELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAK-VDYDG 268 (373)
T ss_dssp CSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCC-SSCCS
T ss_pred CCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCC-ccccc
Confidence 34567889999999999999999999999987 455 778999999999999998 89999999998644 433
Q ss_pred ------hccCCCcHHHHHHHcCChHHHHHHHHHH-hccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhccccccc
Q 037085 80 ------LTSNGETALHLAVKKSRSDAFQALVDEA-KSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIM 152 (248)
Q Consensus 80 ------~~~~g~t~lh~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~ 152 (248)
.|..|.||||+|+..|+.+++++|++++ ++ ++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 269 ~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~------~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga----- 337 (373)
T 2fo1_E 269 AARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN------KDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGA----- 337 (373)
T ss_dssp GGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-----
T ss_pred ccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC------ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----
Confidence 5678999999999999999999999986 66 88999999999999999999999999999998
Q ss_pred ccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhc
Q 037085 153 IRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQ 192 (248)
Q Consensus 153 ~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~ 192 (248)
+++.+|..|+|||++|+.. ++.+++++|++++++.
T Consensus 338 -d~~~~d~~g~t~l~~A~~~----g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 338 -SVEAVDATDHTARQLAQAN----NHHNIVDIFDRCRPER 372 (373)
T ss_dssp -CSSCCCSSSCCHHHHHHHT----TCHHHHHHHHTTC---
T ss_pred -CccCCCCCCCCHHHHHHHc----CCHHHHHHHHhcCccc
Confidence 8999999999999999988 7899999999998763
No 64
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=8e-30 Score=205.53 Aligned_cols=149 Identities=30% Similarity=0.397 Sum_probs=135.6
Q ss_pred HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhh--------
Q 037085 9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKL-------- 80 (248)
Q Consensus 9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~-------- 80 (248)
++..|..|.||||+|+..|+.+++++|++.++++ +..|..|.||||+|+..|+.+++++|++.+.+ ++..
T Consensus 66 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~l 143 (299)
T 1s70_B 66 INYANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCGYLDIAEYLISQGAH-VGAVNSEGDTPL 143 (299)
T ss_dssp TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-CCCcCCCCCCHH
Confidence 5667889999999999999999999999999998 78899999999999999999999999997542 2222
Q ss_pred ----------------------------------------------------ccCCCcHHHHHHHcCChHHHHHHHHHHh
Q 037085 81 ----------------------------------------------------TSNGETALHLAVKKSRSDAFQALVDEAK 108 (248)
Q Consensus 81 ----------------------------------------------------~~~g~t~lh~a~~~~~~~~~~~Ll~~~~ 108 (248)
+..|.||||+|+..|+.+++++|+++|+
T Consensus 144 ~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 223 (299)
T 1s70_B 144 DIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARY 223 (299)
T ss_dssp HHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTC
T ss_pred HHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCC
Confidence 2468899999999999999999999998
Q ss_pred ccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHH
Q 037085 109 SHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNA 171 (248)
Q Consensus 109 ~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~ 171 (248)
+ ++.+|..|.||||+|+..|+.+++++|+++|+ +++.+|..|+||+++|.+
T Consensus 224 d------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga------d~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 224 D------VNIKDYDGWTPLHAAAHWGKEEACRILVENLC------DMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp C------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCTTTSCCS
T ss_pred C------CCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCC------CCCCcCCCCCCHHHHHHH
Confidence 8 88999999999999999999999999999998 899999999999999964
No 65
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=1.2e-29 Score=188.53 Aligned_cols=150 Identities=19% Similarity=0.195 Sum_probs=133.8
Q ss_pred cccCchhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhc
Q 037085 2 ARLWPQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLT 81 (248)
Q Consensus 2 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~ 81 (248)
|+..+...+..|..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++. +.+++.+|
T Consensus 22 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~ 99 (172)
T 3v30_A 22 LRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTGGYTDIVGLLLER-DVDINIYD 99 (172)
T ss_dssp HTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCC
T ss_pred HHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCCC
Confidence 45667778889999999999999999999999999999988 78899999999999999999999999998 45588899
Q ss_pred cCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCC
Q 037085 82 SNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQ 161 (248)
Q Consensus 82 ~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~ 161 (248)
..|.||||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+++++ ++...+..
T Consensus 100 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~------~~~~~~~~ 167 (172)
T 3v30_A 100 WNGGTPLLYAVRGNHVKCVEALLARGAD------LTTEADSGYTPMDLAVALGYRKVQQVIENHIL------KLFQSNLV 167 (172)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH------HHSCC---
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC------ccccCCCCCCHHHHHHHhCcHHHHHHHHHHHH------HHhcccCC
Confidence 9999999999999999999999999988 88899999999999999999999999999998 77778888
Q ss_pred CCCH
Q 037085 162 GQTA 165 (248)
Q Consensus 162 g~tp 165 (248)
|.||
T Consensus 168 ~~~p 171 (172)
T 3v30_A 168 PADP 171 (172)
T ss_dssp ----
T ss_pred CCCC
Confidence 8876
No 66
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=202.83 Aligned_cols=179 Identities=16% Similarity=0.133 Sum_probs=160.2
Q ss_pred ccCCCCHHHHHHhCCCHHHHHHHHhcCcc-hhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHH
Q 037085 13 NQRGETTMHLLSTDGDARMVRIFGENNRE-LCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLA 91 (248)
Q Consensus 13 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a 91 (248)
+..+++++|.|+..|+.+.++.+++...+ ..+..|..|.||||+|+..|+.+++++|++.+..+++..+..|.||||+|
T Consensus 73 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a 152 (276)
T 4hbd_A 73 RLACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLT 152 (276)
T ss_dssp HHHHSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHG
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHH
Confidence 44567889999999999999999988765 23778999999999999999999999999997767899999999999999
Q ss_pred H-----HcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHH
Q 037085 92 V-----KKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTAL 166 (248)
Q Consensus 92 ~-----~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl 166 (248)
+ ..++.+++++|++.|.. .+..+..|.||||+|+..|+.+++++|+++|+ +++.+|..|+|||
T Consensus 153 ~~~~~~~~~~~~~v~~Ll~~g~~------~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga------d~n~~d~~G~TpL 220 (276)
T 4hbd_A 153 ALATLKTQDDIETVLQLFRLGNI------NAKASQAGQTALMLAVSHGRVDVVKALLACEA------DVNVQDDDGSTAL 220 (276)
T ss_dssp GGCCCCSHHHHHHHHHHHHHSCT------TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHH
T ss_pred HHHHhhhhhhHHHHHHHHHcCCC------ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCC------CCCCCCCCCCCHH
Confidence 9 66889999999999876 77888999999999999999999999999998 8999999999999
Q ss_pred HHHHHcCCCchHHHHHHHHHH-hhhhcCCCCCCCCCccccccc
Q 037085 167 QLCNANSQDSVFKEIGWIIQR-AVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 167 ~~a~~~~~~~~~~~i~~~L~~-~g~~~~~~~~~~~~~~~~~~~ 208 (248)
|+|+.. ++.+++++|++ .|++++.....+.+ |++++.
T Consensus 221 h~A~~~----g~~~iv~~Ll~~~gad~~~~d~~g~T-pL~~A~ 258 (276)
T 4hbd_A 221 MCACEH----GHKEIAGLLLAVPSCDISLTDRDGST-ALMVAL 258 (276)
T ss_dssp HHHHHH----TCHHHHHHHHTSTTCCTTCCCTTSCC-HHHHHH
T ss_pred HHHHHC----CCHHHHHHHHhcCCCCCcCcCCCCCC-HHHHHH
Confidence 999988 78999999999 89999988776655 776554
No 67
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=1.5e-29 Score=185.21 Aligned_cols=146 Identities=14% Similarity=0.063 Sum_probs=118.2
Q ss_pred HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCc-H
Q 037085 9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGET-A 87 (248)
Q Consensus 9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t-~ 87 (248)
....+..|.||||+|+..|+.+++++|++++.++ +.++..|.||||+|+ .|+.+++++|++. +.+++.+|..|.| |
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~-g~~~~~~d~~g~ttp 81 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLH-GAEPNCADPATLTRP 81 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTT-TCCCCCCCTTTCCCH
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHc-CCCCCCcCCCCCcHH
Confidence 4566888999999999999999999999999988 788999999999986 9999999999998 4568889999999 9
Q ss_pred HHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHH
Q 037085 88 LHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQ 167 (248)
Q Consensus 88 lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~ 167 (248)
||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+++|+ +++.++..|.||.+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~------~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVLHRAGAR------LDVRDAWGRLPVDLAEELGHRDVARYLRAAAG------GTRGSNHARIDAAE 149 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCC------SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------------
T ss_pred HHHHHHCCCHHHHHHHHHcCCC------CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCC------CCCccCcCcCcccc
Confidence 9999999999999999999988 88999999999999999999999999999998 89999999999987
Q ss_pred HH
Q 037085 168 LC 169 (248)
Q Consensus 168 ~a 169 (248)
-+
T Consensus 150 ~~ 151 (156)
T 1bi7_B 150 GP 151 (156)
T ss_dssp --
T ss_pred cC
Confidence 44
No 68
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=8.7e-29 Score=177.01 Aligned_cols=130 Identities=15% Similarity=0.205 Sum_probs=95.8
Q ss_pred hhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCC-
Q 037085 44 LEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKE- 122 (248)
Q Consensus 44 ~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~- 122 (248)
+.++..|.||||+|+..|+.+++++|++.+ .+++.++..|.||||+|+. ++.+++++|+++|++ ++.+|..
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~------~~~~~~~~ 77 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEAG-ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE------PNCADPAT 77 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC------SSCCBTTT
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHcC-CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC------CCCcCCCC
Confidence 556677777777777777777777777763 4466667777777777777 777777777777766 6677777
Q ss_pred CCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhh
Q 037085 123 GNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQ 191 (248)
Q Consensus 123 g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~ 191 (248)
|.||||+|+..|+.+++++|+++|+ +++.+|..|.||||+|+.. ++.+++++|+++|++
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~ga------~~~~~d~~g~tpl~~A~~~----~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 78 LTRPVHDAAREGFLDTLVVLHRAGA------RLDVCDAWGRLPVDLAEEQ----GHRDIARYLHAATGD 136 (136)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTCC------CCCCCSSSSSCHHHHHHHH----TCHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCC------CCCccCCCCCCHHHHHHHc----CCHHHHHHHHHcCCC
Confidence 7777777777777777777777776 6777777777777777766 567777777777764
No 69
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=4.6e-29 Score=187.77 Aligned_cols=161 Identities=11% Similarity=0.021 Sum_probs=141.2
Q ss_pred CCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCH----HHHHHHHHhCchhhhhhccCCCcHHHHH
Q 037085 16 GETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDS----DVIRALVSICPESLEKLTSNGETALHLA 91 (248)
Q Consensus 16 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~----~~~~~Ll~~~~~~~~~~~~~g~t~lh~a 91 (248)
+.++|+.|+..|+.+.++.+++.+... ..+..|.||||+|+..|+. +++++|++. +.+++.+|..|+||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-Gadvn~~d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINK-GADIKSRTKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT-TCCSSCCCTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHC-CCCCCCCCCCCCcHHHHH
Confidence 568999999999999999999987643 2237799999999999975 599999998 556899999999999999
Q ss_pred HHcCC------hHHHHHHHHHHhccccccccccccCCCC-cHhHHHHhCC-----cHHHHHHHHh-hccccccccccccc
Q 037085 92 VKKSR------SDAFQALVDEAKSHRKEHLFTWKDKEGN-TVLHLATLNK-----LKQIVELLIR-ENSNRRIMIRINTV 158 (248)
Q Consensus 92 ~~~~~------~~~~~~Ll~~~~~~~~~~~~~~~~~~g~-t~Lh~A~~~~-----~~~~v~~Ll~-~g~~~~~~~~~~~~ 158 (248)
+..++ .+++++|+++|++ ++.+|..|. ||||+|+..+ +.+++++|++ +|+ |++.+
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gad------in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~ga------d~~~~ 150 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGAD------ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGL------QLLIK 150 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCC------SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTC------CTTCC
T ss_pred HHcCCcchhhHHHHHHHHHHCCCC------CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCC------CCccc
Confidence 99987 5789999999999 999999999 9999999944 4679999999 898 89999
Q ss_pred CCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCC
Q 037085 159 NKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQ 195 (248)
Q Consensus 159 ~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~ 195 (248)
|..|+||||+|+.. ++.+++++|.+...+.+..
T Consensus 151 d~~G~TpL~~A~~~----~~~~~v~~L~~~~~~~~~~ 183 (186)
T 3t8k_A 151 DKWGLTALEFVKRC----QKPIALKMMEDYIKKYNLK 183 (186)
T ss_dssp CTTSCCHHHHHHTT----TCHHHHHHHHHHHHHHTCC
T ss_pred CCCCCCHHHHHHHc----CCHHHHHHHHHHHHHHhcc
Confidence 99999999999987 7889999999887766554
No 70
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=6.3e-31 Score=204.52 Aligned_cols=178 Identities=14% Similarity=0.082 Sum_probs=149.2
Q ss_pred HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHH
Q 037085 9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETAL 88 (248)
Q Consensus 9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l 88 (248)
.+..+..|.|+||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|++. +.+++.+|..|.|||
T Consensus 14 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~n~~d~~g~tpL 91 (229)
T 2vge_A 14 ARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLITA-GANVNSPDSHGWTPL 91 (229)
T ss_dssp CCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHH
T ss_pred ccccccchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHH
Confidence 3455677888999999999999999999999988 78899999999999999999999999998 456888999999999
Q ss_pred HHHHHcCChHHHHHHHHHHhcccccccccccc-CCCCcHhHHH--HhCCcHHHHHHHHhhcccccccccccccCCCCCCH
Q 037085 89 HLAVKKSRSDAFQALVDEAKSHRKEHLFTWKD-KEGNTVLHLA--TLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTA 165 (248)
Q Consensus 89 h~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~-~~g~t~Lh~A--~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tp 165 (248)
|+|+..|+.+++++|+++|++ ++.++ ..|.||||+| +..++.+++++|+++|+ +++..|..|.||
T Consensus 92 h~A~~~g~~~~v~~Ll~~ga~------~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga------~~~~~~~~~~~~ 159 (229)
T 2vge_A 92 HCAASCNDTVICMALVQHGAA------IFATTLSDGATAFEKCDPYREGYADCATYLADVEQ------SMGLMNSGAVYA 159 (229)
T ss_dssp HHHHHTTCHHHHHHHHTTTCC------TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHH------HTTTSGGGEEEE
T ss_pred HHHHHcCCHHHHHHHHHcCCC------cccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCC------CcccccCCchHH
Confidence 999999999999999999988 77776 6999999999 99999999999999998 788888888888
Q ss_pred HHHHHHcCCCchHHHHHHHHHHhhhhc--CCCCCCCCCccccccc
Q 037085 166 LQLCNANSQDSVFKEIGWIIQRAVAQQ--SPQLPDAGSANVSWNQ 208 (248)
Q Consensus 166 l~~a~~~~~~~~~~~i~~~L~~~g~~~--~~~~~~~~~~~~~~~~ 208 (248)
++.+... ...++|++.|+++ +.++..+. +|++++.
T Consensus 160 l~~~~~~-------~~~~~ll~~ga~~~~~~~d~~G~-TpL~~A~ 196 (229)
T 2vge_A 160 LWDYSAE-------FGDELSFREGESVTVLRRDGPEE-TDWWWAA 196 (229)
T ss_dssp SSCBCCS-------STTBCCBCTTCEEEEEESSCTTC-SSEEEEE
T ss_pred HHHHhhc-------cccccCccccccccccccCCCcc-cHHHHHH
Confidence 8755332 2235677778874 33343333 3777655
No 71
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=8.8e-29 Score=176.99 Aligned_cols=130 Identities=14% Similarity=0.119 Sum_probs=122.9
Q ss_pred HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccC-CCcH
Q 037085 9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSN-GETA 87 (248)
Q Consensus 9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~-g~t~ 87 (248)
++..+..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+. |+.+++++|++.+ .+++.+|.. |.||
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~~~~~g~t~ 81 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLHG-AEPNCADPATLTRP 81 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHHT-CCSSCCBTTTTBCH
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHCC-CCCCCcCCCCCCCH
Confidence 5678899999999999999999999999999988 7889999999999999 9999999999985 458888999 9999
Q ss_pred HHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcc
Q 037085 88 LHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENS 147 (248)
Q Consensus 88 lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~ 147 (248)
||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+++|+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 82 VHDAAREGFLDTLVVLHRAGAR------LDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTCCC------CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred HHHHHHcCCHHHHHHHHHcCCC------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 9999999999999999999988 88999999999999999999999999999987
No 72
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=9e-28 Score=181.57 Aligned_cols=147 Identities=23% Similarity=0.189 Sum_probs=134.3
Q ss_pred hhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCC
Q 037085 44 LEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEG 123 (248)
Q Consensus 44 ~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g 123 (248)
+.+|..|.||||+|+..|+.+++++|++. +..++..+..|.||||+|+..++.+++++|+++|++ ++.+|..|
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g 101 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVEN-FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN------VNTKDFSG 101 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHH-HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC------TTCCCTTS
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHh-ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCC------CCCCCCCC
Confidence 56789999999999999999999999998 456788899999999999999999999999999988 88899999
Q ss_pred CcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcc
Q 037085 124 NTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSAN 203 (248)
Q Consensus 124 ~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~ 203 (248)
.||||+|+..++.+++++|+++|+ +++.+|..|.||||+|+.. ++.+++++|+++|++++.....+.+ |
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~~----~~~~~v~~Ll~~ga~~~~~~~~g~t-~ 170 (192)
T 2rfm_A 102 KTPLMWSIIFGYSEMSYFLLEHGA------NVNDRNLEGETPLIVASKY----GRSEIVKKLLELGADISARDLTGLT-A 170 (192)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTC------CSSCCCTTCCCHHHHHHHH----TCHHHHHHHHHTTCCTTCBCTTSCB-H
T ss_pred CcHHHHHHHcCCHHHHHHHHHCCC------CCCCCCCCCCCHHHHHHHc----CCHHHHHHHHHCCCCCCCcCCCCCC-H
Confidence 999999999999999999999997 8999999999999999988 7889999999999999887765555 6
Q ss_pred ccccc
Q 037085 204 VSWNQ 208 (248)
Q Consensus 204 ~~~~~ 208 (248)
++++.
T Consensus 171 l~~A~ 175 (192)
T 2rfm_A 171 EASAR 175 (192)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 73
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=6e-28 Score=180.56 Aligned_cols=147 Identities=16% Similarity=0.196 Sum_probs=133.8
Q ss_pred cccCchhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhc
Q 037085 2 ARLWPQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLT 81 (248)
Q Consensus 2 l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~ 81 (248)
|+..+..++..+..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++.+ .+++.+|
T Consensus 25 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d 102 (179)
T 3f6q_A 25 LDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAASHGHRDIVQKLLQYK-ADINAVN 102 (179)
T ss_dssp HHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCC
T ss_pred HhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccC
Confidence 34456667888999999999999999999999999999998 788999999999999999999999999984 5688899
Q ss_pred cCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCC
Q 037085 82 SNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQ 161 (248)
Q Consensus 82 ~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~ 161 (248)
..|.||||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+++|+ +++..+..
T Consensus 103 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~------~~~~~~~~ 170 (179)
T 3f6q_A 103 EHGNVPLHYACFWGQDQVAEDLVANGAL------VSICNKYGEMPVDKAKAPLRELLRERAEKMGQ------NLNRIPYK 170 (179)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCC------SSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTC------CCSCBCCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCC------cchhccCCCCcHHHHHHHHHHHHHHHHHHhhc------CcccCCcc
Confidence 9999999999999999999999999988 88999999999999999999999999999998 56555544
Q ss_pred C
Q 037085 162 G 162 (248)
Q Consensus 162 g 162 (248)
+
T Consensus 171 ~ 171 (179)
T 3f6q_A 171 D 171 (179)
T ss_dssp C
T ss_pred c
Confidence 3
No 74
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=1.6e-27 Score=170.42 Aligned_cols=130 Identities=20% Similarity=0.242 Sum_probs=117.8
Q ss_pred HhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHH
Q 037085 9 ASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETAL 88 (248)
Q Consensus 9 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l 88 (248)
.......|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|++. +.+++.+|..|.|||
T Consensus 7 ~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L 84 (136)
T 2jab_A 7 HHHHGSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKN-GADVNAVDAIGFTPL 84 (136)
T ss_dssp -----CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHH
T ss_pred CCcccccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHH
Confidence 3445667899999999999999999999999988 78899999999999999999999999998 456888899999999
Q ss_pred HHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhc
Q 037085 89 HLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIREN 146 (248)
Q Consensus 89 h~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g 146 (248)
|+|+..++.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+++|
T Consensus 85 ~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 85 HLAAFIGHLEIAEVLLKHGAD------VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHcCCHHHHHHHHHcCCC------CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999888 8889999999999999999999999999875
No 75
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=6.1e-27 Score=164.60 Aligned_cols=125 Identities=30% Similarity=0.473 Sum_probs=118.5
Q ss_pred CCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHc
Q 037085 15 RGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKK 94 (248)
Q Consensus 15 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~ 94 (248)
+|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++.+ ..++.++..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHc
Confidence 5899999999999999999999999987 778999999999999999999999999984 55788899999999999999
Q ss_pred CChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcc
Q 037085 95 SRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENS 147 (248)
Q Consensus 95 ~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~ 147 (248)
++.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+++|+
T Consensus 79 ~~~~~~~~Ll~~g~~------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 79 GHLEVVKLLLEAGAD------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp TCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred ChHHHHHHHHHcCCC------CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 999999999999888 88899999999999999999999999999997
No 76
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=3.4e-27 Score=173.46 Aligned_cols=133 Identities=21% Similarity=0.288 Sum_probs=122.8
Q ss_pred hhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCc
Q 037085 7 QLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGET 86 (248)
Q Consensus 7 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t 86 (248)
..++..|..|.||||+|+. |+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++.+ .+++.+|..|.|
T Consensus 29 ~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t 105 (162)
T 1ihb_A 29 VNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARAGFLDTLQTLLEFQ-ADVNIEDNEGNL 105 (162)
T ss_dssp CCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCC
T ss_pred CCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCC
Confidence 3457788999999999999 9999999999999988 788999999999999999999999999984 568889999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcc
Q 037085 87 ALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENS 147 (248)
Q Consensus 87 ~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~ 147 (248)
|||+|+..++.+++++|+++|++. ++.+|..|.||||+|+..++.+++++|+++|+
T Consensus 106 ~L~~A~~~~~~~~v~~Ll~~g~~~-----~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 106 PLHLAAKEGHLRVVEFLVKHTASN-----VGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCCC-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred HHHHHHHcCCHHHHHHHHHccCCC-----CCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence 999999999999999999998863 57899999999999999999999999999997
No 77
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=3.4e-27 Score=174.04 Aligned_cols=146 Identities=21% Similarity=0.218 Sum_probs=133.0
Q ss_pred hcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCc
Q 037085 46 VDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNT 125 (248)
Q Consensus 46 ~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t 125 (248)
.+.+|.||||.|+..|+.++++.|++..+...+..+..|.||||+|+..++.+++++|+++|++ ++.+|..|.|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t 77 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD------VHAKDKGGLV 77 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCC
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC------CCccCCCCCC
Confidence 4677889999999999999999999977777788888999999999999999999999999888 8899999999
Q ss_pred HhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCcccc
Q 037085 126 VLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVS 205 (248)
Q Consensus 126 ~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~ 205 (248)
|||+|+..++.+++++|+++|+ +++.+|..|.||||+|+.. ++.+++++|+++|++++.+...+.+ |++
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~~----~~~~~v~~Ll~~ga~~~~~~~~g~t-~l~ 146 (165)
T 3twr_A 78 PLHNACSYGHYEVAELLVKHGA------VVNVADLWKFTPLHEAAAK----GKYEICKLLLQHGADPTKKNRDGNT-PLD 146 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTCCCHHHHHHHT----TCHHHHHHHHHTTCCTTCCCTTSCC-TGG
T ss_pred HHHHHHHcCcHHHHHHHHhCCC------CCCCcCCCCCCHHHHHHHc----CCHHHHHHHHHcCCCCcccCCCCCC-hhH
Confidence 9999999999999999999998 8999999999999999988 7899999999999999888776665 777
Q ss_pred ccc
Q 037085 206 WNQ 208 (248)
Q Consensus 206 ~~~ 208 (248)
.+.
T Consensus 147 ~a~ 149 (165)
T 3twr_A 147 LVK 149 (165)
T ss_dssp GSC
T ss_pred hHh
Confidence 654
No 78
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=5.3e-27 Score=173.38 Aligned_cols=142 Identities=14% Similarity=0.141 Sum_probs=129.8
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhH
Q 037085 49 SLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLH 128 (248)
Q Consensus 49 ~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh 128 (248)
.|.||||.|+..|+.+++++|++.+ ..++.+|..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~ 74 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQE-NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD------PQLLGKGRESALS 74 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHS-SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTCCCHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcC-CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC------CCCcCCCCCcHHH
Confidence 5789999999999999999999985 55888999999999999999999999999999888 8889999999999
Q ss_pred HHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCCccccccc
Q 037085 129 LATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGSANVSWNQ 208 (248)
Q Consensus 129 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~~~~~~ 208 (248)
+|+..++.+++++|+++|+ +++.+|..|.||||+|+.. ++.+++++|+++|++++.....+.+ |++++.
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~t~L~~A~~~----~~~~~v~~Ll~~g~~~~~~~~~g~t-~l~~A~ 143 (167)
T 3v31_A 75 LACSKGYTDIVKMLLDCGV------DVNEYDWNGGTPLLYAVHG----NHVKCVKMLLESGADPTIETDSGYN-SMDLAV 143 (167)
T ss_dssp HHHHHTCHHHHHHHHHHTC------CTTCCCTTSCCHHHHHHHT----TCHHHHHHHHHTTCCTTCCCTTSCC-HHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCC------CCCcCCCCCCCHHHHHHHc----CCHHHHHHHHHcCCCCCCcCCCCCC-HHHHHH
Confidence 9999999999999999997 8999999999999999988 7899999999999999887765555 666544
No 79
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=1.1e-26 Score=163.28 Aligned_cols=126 Identities=31% Similarity=0.433 Sum_probs=118.4
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhH
Q 037085 49 SLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLH 128 (248)
Q Consensus 49 ~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh 128 (248)
+|.||||+|+..|+.+++++|++.+ ..++..+..|.||||+|+..++.+++++|+++|.+ ++.+|..|.||||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~t~l~ 73 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------VNAKDKNGRTPLH 73 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC------CcccCCCCCcHHH
Confidence 5899999999999999999999984 45788899999999999999999999999999888 8889999999999
Q ss_pred HHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhh
Q 037085 129 LATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQ 191 (248)
Q Consensus 129 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~ 191 (248)
+|+..++.+++++|+++|+ +++.+|..|.|||++|+.. ++.+++++|+++|++
T Consensus 74 ~A~~~~~~~~~~~Ll~~g~------~~~~~~~~g~t~l~~A~~~----~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 74 LAARNGHLEVVKLLLEAGA------DVNAKDKNGRTPLHLAARN----GHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHT----TCHHHHHHHHHHTCC
T ss_pred HHHHcChHHHHHHHHHcCC------CCcccCCCCCCHHHHHHHc----CcHHHHHHHHHcCCC
Confidence 9999999999999999997 8899999999999999987 789999999999985
No 80
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=7.9e-27 Score=172.91 Aligned_cols=131 Identities=24% Similarity=0.355 Sum_probs=122.2
Q ss_pred hHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcH
Q 037085 8 LASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETA 87 (248)
Q Consensus 8 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~ 87 (248)
.++..|..|.||||+|+..|+.+++++|++.+.++ +..+..|.||||+|+..|+.+++++|++.+ ..++.+|..|.||
T Consensus 39 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~ 116 (169)
T 2y1l_E 39 DVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAALFGHLEIVEVLLKNG-ADVNANDMEGHTP 116 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCH
Confidence 35667889999999999999999999999999988 788999999999999999999999999984 5578889999999
Q ss_pred HHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhc
Q 037085 88 LHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIREN 146 (248)
Q Consensus 88 lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g 146 (248)
||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|++.|
T Consensus 117 L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 117 LHLAAMFGHLEIVEVLLKNGAD------VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999999999999999988 8889999999999999999999999999875
No 81
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=8.4e-27 Score=166.66 Aligned_cols=127 Identities=25% Similarity=0.306 Sum_probs=116.7
Q ss_pred hcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCc
Q 037085 46 VDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNT 125 (248)
Q Consensus 46 ~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t 125 (248)
....+.||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+..++.+++++|+++|++ ++.+|..|.|
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~d~~g~t 82 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANG-ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD------VNAVDAIGFT 82 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTCCC
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCcCCCCCCC
Confidence 3556789999999999999999999984 55788899999999999999999999999999888 8899999999
Q ss_pred HhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhh
Q 037085 126 VLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAV 189 (248)
Q Consensus 126 ~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g 189 (248)
|||+|+..++.+++++|+++|+ +++.+|..|.|||++|+.. ++.+++++|+++|
T Consensus 83 ~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~g~tpl~~A~~~----~~~~~~~~Ll~~G 136 (136)
T 2jab_A 83 PLHLAAFIGHLEIAEVLLKHGA------DVNAQDKFGKTAFDISIGN----GNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHT----TCHHHHHHHHHC-
T ss_pred HHHHHHHcCCHHHHHHHHHcCC------CCcCcCCCCCCHHHHHHHC----CCHHHHHHHHHcC
Confidence 9999999999999999999997 8999999999999999988 7899999999876
No 82
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=1.6e-27 Score=174.40 Aligned_cols=140 Identities=14% Similarity=0.117 Sum_probs=117.4
Q ss_pred hhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCC
Q 037085 44 LEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEG 123 (248)
Q Consensus 44 ~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g 123 (248)
...+..|.||||+|+..|+.+++++|++. +..++.++..|.||||+|+ .++.+++++|+++|++ ++.+|..|
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~------~~~~d~~g 77 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEA-GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE------PNCADPAT 77 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTT-TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC------CCCCCTTT
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC------CCCcCCCC
Confidence 44578899999999999999999999998 4568889999999999985 8999999999999888 89999999
Q ss_pred Cc-HhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCC
Q 037085 124 NT-VLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGS 201 (248)
Q Consensus 124 ~t-~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~ 201 (248)
.| |||+|+..|+.+++++|+++|+ +++.+|..|.||||+|+.. ++.+++++|+++|+++......+.+
T Consensus 78 ~ttpL~~A~~~~~~~~v~~Ll~~ga------~~~~~d~~g~tpl~~A~~~----~~~~~v~~Ll~~ga~~~~~~~~g~t 146 (156)
T 1bi7_B 78 LTRPVHDAAREGFLDTLVVLHRAGA------RLDVRDAWGRLPVDLAEEL----GHRDVARYLRAAAGGTRGSNHARID 146 (156)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTC------CSSCCCTTCCCHHHHHHHH----TCHHHHHHHSSCC------------
T ss_pred CcHHHHHHHHCCCHHHHHHHHHcCC------CCcccCCCCCCHHHHHHHh----CHHHHHHHHHHcCCCCCccCcCcCc
Confidence 99 9999999999999999999998 8999999999999999988 7889999999999999887765544
No 83
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=1.8e-26 Score=168.58 Aligned_cols=130 Identities=22% Similarity=0.260 Sum_probs=120.7
Q ss_pred chhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCC
Q 037085 6 PQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGE 85 (248)
Q Consensus 6 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~ 85 (248)
+...+..|..|.||||+ +..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|++.+ .+++.+|..|.
T Consensus 26 ~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~ 102 (156)
T 1bd8_A 26 LVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTGFLDTLKVLVEHG-ADVNVPDGTGA 102 (156)
T ss_dssp CCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTSC
T ss_pred CcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCCcCCCCC
Confidence 34567788999999999 9999999999999999998 788999999999999999999999999985 56888899999
Q ss_pred cHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhh
Q 037085 86 TALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRE 145 (248)
Q Consensus 86 t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~ 145 (248)
||||+|+..|+.+++++|++. ++ ++.+|..|.||||+|+..|+.+++++|+++
T Consensus 103 t~L~~A~~~~~~~~v~~Ll~~-~~------~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 103 LPIHLAVQEGHTAVVSFLAAE-SD------LHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHTT-SC------TTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred cHHHHHHHhChHHHHHHHHhc-cC------CCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 999999999999999999988 66 888999999999999999999999999874
No 84
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=6.3e-27 Score=181.89 Aligned_cols=150 Identities=19% Similarity=0.185 Sum_probs=126.2
Q ss_pred HHHHHhcCcchh--hhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhc
Q 037085 32 VRIFGENNRELC--LEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKS 109 (248)
Q Consensus 32 v~~Ll~~~~~~~--~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~ 109 (248)
++.|++++.++. ...+..+.||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+..|+.+++++|++.|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEM-NDPSQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHS-SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 466788877652 334556778899999999999999999985 45888999999999999999999999999999988
Q ss_pred cccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccC-CCCCCHHHHH--HHcCCCchHHHHHHHHH
Q 037085 110 HRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVN-KQGQTALQLC--NANSQDSVFKEIGWIIQ 186 (248)
Q Consensus 110 ~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~-~~g~tpl~~a--~~~~~~~~~~~i~~~L~ 186 (248)
++.+|..|.||||+|+..|+.+++++|+++|+ +++.++ ..|.||||+| +.. ++.+++++|+
T Consensus 80 ------~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga------~~~~~~~~~g~tpL~~A~a~~~----~~~~~v~~Ll 143 (229)
T 2vge_A 80 ------VNSPDSHGWTPLHCAASCNDTVICMALVQHGA------AIFATTLSDGATAFEKCDPYRE----GYADCATYLA 143 (229)
T ss_dssp ------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC------CTTCCCSSTTCCTGGGCCTTST----THHHHHHHHH
T ss_pred ------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CcccccCCCCCCHHHHHHHHhc----ChHHHHHHHH
Confidence 89999999999999999999999999999998 788886 5999999999 655 8999999999
Q ss_pred HhhhhcCCCCCC
Q 037085 187 RAVAQQSPQLPD 198 (248)
Q Consensus 187 ~~g~~~~~~~~~ 198 (248)
++|++++.....
T Consensus 144 ~~ga~~~~~~~~ 155 (229)
T 2vge_A 144 DVEQSMGLMNSG 155 (229)
T ss_dssp HHHHHTTTSGGG
T ss_pred HcCCCcccccCC
Confidence 999999887543
No 85
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=6.4e-27 Score=167.39 Aligned_cols=129 Identities=19% Similarity=0.194 Sum_probs=94.6
Q ss_pred hhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCC
Q 037085 45 EVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGN 124 (248)
Q Consensus 45 ~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~ 124 (248)
.+|..|.||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+..++.+++++|+++|++ ++.+|..|.
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~~~~g~ 77 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNG-SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL------VNTTGYQND 77 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCGGGC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc------ccCcCCCCC
Confidence 35677778888888888888888877763 44667777788888888888888888888877766 677777888
Q ss_pred cHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhh
Q 037085 125 TVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVA 190 (248)
Q Consensus 125 t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~ 190 (248)
||||+|+..++.+++++|+++|+ +++.+|..|.||+++|+.. +..+++++|.+.+.
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~g~tpl~~A~~~----~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 78 SPLHDAAKNGHVDIVKLLLSYGA------SRNAVNIFGLRPVDYTDDE----SMKSLLLLPEKNES 133 (137)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTSCCGGGGCCCH----HHHHHHSCC-----
T ss_pred CHHHHHHHcCCHHHHHHHHHcCC------CCCCCCCCCCCHHHHHhhc----cHHHHHhhcccccc
Confidence 88888888888888888888776 6777888888888887644 66777766665543
No 86
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=5.9e-26 Score=165.41 Aligned_cols=123 Identities=19% Similarity=0.229 Sum_probs=116.5
Q ss_pred hccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHH
Q 037085 12 KNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLA 91 (248)
Q Consensus 12 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a 91 (248)
.+..|.||||+|+..|+.+++++|++.+.++ +.++..|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A 107 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEGHANIVEVLLKH-GADVNAKDMLKMTALHWA 107 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcChHHHHHHHHHc-CCCCCCCCCCCCCHHHHH
Confidence 4778999999999999999999999999988 78899999999999999999999999998 456888999999999999
Q ss_pred HHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHH
Q 037085 92 VKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELL 142 (248)
Q Consensus 92 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~L 142 (248)
+..++.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|
T Consensus 108 ~~~~~~~~v~~Ll~~ga~------~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 108 TEHNHQEVVELLIKYGAD------VHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCC------ccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 999999999999999988 888999999999999999999999987
No 87
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=9.3e-27 Score=179.98 Aligned_cols=133 Identities=18% Similarity=0.198 Sum_probs=119.0
Q ss_pred hHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcH
Q 037085 8 LASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETA 87 (248)
Q Consensus 8 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~ 87 (248)
.+...+..|.||||+|+..|+.++++.|++.+.++ +.+|..|.||||+|+..|+.+++++|++..+..++.+|..|.||
T Consensus 65 ~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tp 143 (222)
T 3ehr_A 65 YVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTA 143 (222)
T ss_dssp HHHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCH
T ss_pred hccccccccccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCH
Confidence 45667888999999999999999999999999987 78899999999999999999999999998566788999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcc
Q 037085 88 LHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENS 147 (248)
Q Consensus 88 lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~ 147 (248)
||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.++++.|++.++
T Consensus 144 L~~A~~~~~~~~v~~Ll~~ga~------~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~ 197 (222)
T 3ehr_A 144 LHAAAWKGYADIVQLLLAKGAR------TDLRNIEKKLAFDMATNAACASLLKKKQGTDA 197 (222)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCC------SCCCCTTSCCHHHHCCSHHHHHHHC-------
T ss_pred HHHHHHcCCHHHHHHHHHcCCC------CccccCCCCCHHHHhcchhHHHHHHHHhccch
Confidence 9999999999999999999998 88999999999999999999999999999998
No 88
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.93 E-value=7.8e-27 Score=190.76 Aligned_cols=147 Identities=13% Similarity=0.110 Sum_probs=119.9
Q ss_pred chhHhhhccCCCCHHHHHHhCCC---HHHHHHHHhcCcchhhhhcCCCCcHHHHHHH----hCCHHHHHHHHHhC-----
Q 037085 6 PQLASIKNQRGETTMHLLSTDGD---ARMVRIFGENNRELCLEVDNSLMIPLHRAAL----EGDSDVIRALVSIC----- 73 (248)
Q Consensus 6 ~~~~~~~~~~g~t~L~~A~~~g~---~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~----~g~~~~~~~Ll~~~----- 73 (248)
+..++.+|..|+||||+|+..|+ .++++.|++.+....+.+|..|.||||+|+. .|+.+++++|++.+
T Consensus 154 Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~ 233 (327)
T 1sw6_A 154 GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIV 233 (327)
T ss_dssp TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHh
Confidence 34456789999999999999998 6788888888744348899999999999999 89999999999873
Q ss_pred --------------chhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHH
Q 037085 74 --------------PESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIV 139 (248)
Q Consensus 74 --------------~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v 139 (248)
+..++.++..|.||||+|+. +++|+++ + ++.+|..|+||||+|+..|+.+++
T Consensus 234 ~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~------~n~~d~~G~TpLh~A~~~g~~~~v 299 (327)
T 1sw6_A 234 KKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--M------LNAQDSNGDTCLNIAARLGNISIV 299 (327)
T ss_dssp HGGGCCEEEC----------------CHHHHHCS------HHHHHHH--T------TTCCCTTSCCHHHHHHHHCCHHHH
T ss_pred cccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--C------CCCCCCCCCCHHHHHHHcCCHHHH
Confidence 45577889999999999985 8889887 3 788999999999999999999999
Q ss_pred HHHHhhcccccccccccccCCCCCCHHHHHHHc
Q 037085 140 ELLIRENSNRRIMIRINTVNKQGQTALQLCNAN 172 (248)
Q Consensus 140 ~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~ 172 (248)
++|+++|+ |++.+|..|+||||+|+..
T Consensus 300 ~~Ll~~Ga------d~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 300 DALLDYGA------DPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp HHHHHTTC------CTTCCCTTSCCGGGGTCC-
T ss_pred HHHHHcCC------CCcccCCCCCCHHHHHHhc
Confidence 99999998 8999999999999999754
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=1.4e-26 Score=165.61 Aligned_cols=129 Identities=23% Similarity=0.272 Sum_probs=116.7
Q ss_pred hhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHH
Q 037085 11 IKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHL 90 (248)
Q Consensus 11 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~ 90 (248)
.+|..|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQH-KALVNTTGYQNDSPLHD 82 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCGGGCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCcccCcCCCCCCHHHH
Confidence 56889999999999999999999999999988 78899999999999999999999999998 45688899999999999
Q ss_pred HHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcc
Q 037085 91 AVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENS 147 (248)
Q Consensus 91 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~ 147 (248)
|+..++.+++++|+++|++ ++.+|..|.||||+|+..+..+++++|.+.+.
T Consensus 83 A~~~~~~~~v~~Ll~~ga~------~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLSYGAS------RNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHTTCHHHHHHHHHTTCC------TTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHHcCCHHHHHHHHHcCCC------CCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 9999999999999999988 88999999999999999988888888776553
No 90
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=1.1e-25 Score=168.99 Aligned_cols=142 Identities=21% Similarity=0.197 Sum_probs=124.9
Q ss_pred hhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhc-cCCCcHHH
Q 037085 11 IKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLT-SNGETALH 89 (248)
Q Consensus 11 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~-~~g~t~lh 89 (248)
..+..|.||||+|+..|+.++++.|++ +.++ +.+|..|.||||+|+..|+.+++++|++.+ .+++.++ ..|.||||
T Consensus 39 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~g~tpL~ 115 (183)
T 3deo_A 39 DVVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALH 115 (183)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSSCCHHH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCCHHH
Confidence 346789999999999999999999999 7777 788999999999999999999999999985 4566677 88999999
Q ss_pred HHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHH
Q 037085 90 LAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLC 169 (248)
Q Consensus 90 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a 169 (248)
+|+..++.+++++|+++|++ ++.+|..|.||||+|+..+ ....+.+++++|
T Consensus 116 ~A~~~~~~~~v~~Ll~~ga~------~~~~d~~g~tpl~~A~~~~-----------------------~~~~~~~~l~~a 166 (183)
T 3deo_A 116 MAAGYVRPEVVEALVELGAD------IEVEDERGLTALELAREIL-----------------------KTTPKGNPMQFG 166 (183)
T ss_dssp HHHHTTCHHHHHHHHHHTCC------TTCCCTTSCCHHHHHHHHH-----------------------HTCCCCSHHHHH
T ss_pred HHHhcCcHHHHHHHHHcCCC------CcCCCCCCCCHHHHHHHhc-----------------------cCcccccHHHHH
Confidence 99999999999999999988 8899999999999998631 123567999999
Q ss_pred HHcCCCchHHHHHHHHHHh
Q 037085 170 NANSQDSVFKEIGWIIQRA 188 (248)
Q Consensus 170 ~~~~~~~~~~~i~~~L~~~ 188 (248)
+.. +..+++++|.++
T Consensus 167 ~~~----~~~~i~~~L~~~ 181 (183)
T 3deo_A 167 RRI----GLEKVINVLEGQ 181 (183)
T ss_dssp HHH----HHHHHHHHHHTC
T ss_pred HHc----CHHHHHHHHHHh
Confidence 987 899999998754
No 91
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=1.3e-25 Score=176.08 Aligned_cols=146 Identities=21% Similarity=0.192 Sum_probs=128.6
Q ss_pred hhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhc-cCCCcHHH
Q 037085 11 IKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLT-SNGETALH 89 (248)
Q Consensus 11 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~-~~g~t~lh 89 (248)
..+..|.||||+|+..|+.++++.|++ +.++ +.+|..|.||||+|+..|+.+++++|++.+ .+++..+ ..|.||||
T Consensus 40 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~g~t~L~ 116 (244)
T 3ui2_A 40 DVVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALH 116 (244)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSCCCHHH
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCcCCCCCCCCHHH
Confidence 345679999999999999999999999 7777 788999999999999999999999999985 4566666 88999999
Q ss_pred HHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHH
Q 037085 90 LAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLC 169 (248)
Q Consensus 90 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a 169 (248)
+|+..|+.+++++|+++|++ ++.+|..|.||||+|+.. + ....+.|||++|
T Consensus 117 ~A~~~g~~~~v~~Ll~~ga~------~~~~d~~g~t~l~~A~~~------------~-----------~~~~~~~~l~~a 167 (244)
T 3ui2_A 117 MAAGYVRPEVVEALVELGAD------IEVEDERGLTALELAREI------------L-----------KTTPKGNPMQFG 167 (244)
T ss_dssp HHHHTTCHHHHHHHHHTTCC------TTCCCTTCCCHHHHHHHH------------H-----------TTCCCSSHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCC------CCCCCCCCCcHHHHHHHH------------H-----------hccCCCCHHHHH
Confidence 99999999999999999988 889999999999999851 1 234689999999
Q ss_pred HHcCCCchHHHHHHHHHHhhhhc
Q 037085 170 NANSQDSVFKEIGWIIQRAVAQQ 192 (248)
Q Consensus 170 ~~~~~~~~~~~i~~~L~~~g~~~ 192 (248)
+.. ++.+++++|++++.+.
T Consensus 168 ~~~----g~~~iv~~L~~~~~~~ 186 (244)
T 3ui2_A 168 RRI----GLEKVINVLEGQVFEY 186 (244)
T ss_dssp HHH----HHHHHHHHHHHHHEEE
T ss_pred HHc----ChHHHHHHHHHhcccc
Confidence 987 8999999999987653
No 92
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=3e-27 Score=195.98 Aligned_cols=161 Identities=14% Similarity=0.047 Sum_probs=133.2
Q ss_pred hhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchh--hhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchh--hhhhccCCC
Q 037085 10 SIKNQRGETTMHLLSTDGDARMVRIFGENNRELC--LEVDNSLMIPLHRAALEGDSDVIRALVSICPES--LEKLTSNGE 85 (248)
Q Consensus 10 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~--~~~~~~~g~ 85 (248)
...+.++.||||+|+..|+.+++++|++.+.... ...+..|.||||+|+..|+.+++++|++.+++. .+..+.+ .
T Consensus 86 ~~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~ 164 (376)
T 2aja_A 86 HKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-Y 164 (376)
T ss_dssp HHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-H
T ss_pred HHcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-C
Confidence 3456677899999999999999999999987221 133556789999999999999999999997531 1222233 9
Q ss_pred cHHHHHHHcCChHHHHHHHHHHhcccccccccc--ccCCCCcHhHHHH-hCCcHHHHHHHHhhcccccccccccccCCCC
Q 037085 86 TALHLAVKKSRSDAFQALVDEAKSHRKEHLFTW--KDKEGNTVLHLAT-LNKLKQIVELLIRENSNRRIMIRINTVNKQG 162 (248)
Q Consensus 86 t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~--~~~~g~t~Lh~A~-~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g 162 (248)
||||+|+..|+.+++++|+++|++ ++. .|..|.||||+|+ ..|+.++|++|++.|+ + |
T Consensus 165 TpLh~Aa~~G~~eiv~~Ll~~ga~------~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga------~-------~ 225 (376)
T 2aja_A 165 HAFRLAAENGHLHVLNRLCELAPT------EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV------M-------L 225 (376)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSCGG------GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH------H-------H
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCc------cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC------c-------c
Confidence 999999999999999999999988 665 8889999999999 9999999999999775 2 7
Q ss_pred CCHHHHHHHcCCCchHHHHHHHHHHhhhhcCC
Q 037085 163 QTALQLCNANSQDSVFKEIGWIIQRAVAQQSP 194 (248)
Q Consensus 163 ~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~ 194 (248)
.|||++|+.. ++.+++++|+++|++++.
T Consensus 226 ~taL~~Aa~~----g~~evv~lL~~~ga~~~~ 253 (376)
T 2aja_A 226 AYAEIHEFEY----GEKYVNPFIARHVNRLKE 253 (376)
T ss_dssp HHHHHCTTTT----TTTTHHHHHHHHHHHHHH
T ss_pred chHHHHHHHC----CCHHHHHHHHhcCccccc
Confidence 8999999877 778899999999998754
No 93
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.92 E-value=2.3e-26 Score=179.89 Aligned_cols=152 Identities=16% Similarity=0.102 Sum_probs=129.5
Q ss_pred ccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHH
Q 037085 13 NQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAV 92 (248)
Q Consensus 13 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~ 92 (248)
+..|.||||+|+..|+.++++.|++.+.++ +.+|..|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+
T Consensus 34 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tpL~~A~ 111 (239)
T 1ycs_B 34 NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCAGHTEIVKFLVQF-GVNVNAADSDGWTPLHCAA 111 (239)
T ss_dssp ---CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTCCCHHHHHH
T ss_pred CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHH
Confidence 467899999999999999999999999987 78899999999999999999999999998 4568899999999999999
Q ss_pred HcCChHHHHHHHHHHhccccccccccccCCCC-cHhHHH--HhCCcHHHHHHHHhhcccccc---cccccccCCCCCCHH
Q 037085 93 KKSRSDAFQALVDEAKSHRKEHLFTWKDKEGN-TVLHLA--TLNKLKQIVELLIRENSNRRI---MIRINTVNKQGQTAL 166 (248)
Q Consensus 93 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~-t~Lh~A--~~~~~~~~v~~Ll~~g~~~~~---~~~~~~~~~~g~tpl 166 (248)
..|+.+++++|+++|++ ++.++..|. ||||+| +..|+.+++++|++.|++... +......+..+.+++
T Consensus 112 ~~~~~~~v~~Ll~~ga~------~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~ 185 (239)
T 1ycs_B 112 SCNNVQVCKFLVESGAA------VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDD 185 (239)
T ss_dssp HTTCHHHHHHHHHTTCC------TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTT
T ss_pred HcCCHHHHHHHHHcCCC------cceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCC
Confidence 99999999999999988 888888777 999999 788999999999999983210 001122366788888
Q ss_pred HHHHHc
Q 037085 167 QLCNAN 172 (248)
Q Consensus 167 ~~a~~~ 172 (248)
+++...
T Consensus 186 eLa~~~ 191 (239)
T 1ycs_B 186 ELPMKE 191 (239)
T ss_dssp BCCBCS
T ss_pred cccccC
Confidence 877654
No 94
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=9.7e-26 Score=169.59 Aligned_cols=126 Identities=6% Similarity=0.031 Sum_probs=114.8
Q ss_pred cCCCCHHHHHHhCCCH----HHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCC------HHHHHHHHHhCchhhhhhccC
Q 037085 14 QRGETTMHLLSTDGDA----RMVRIFGENNRELCLEVDNSLMIPLHRAALEGD------SDVIRALVSICPESLEKLTSN 83 (248)
Q Consensus 14 ~~g~t~L~~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~------~~~~~~Ll~~~~~~~~~~~~~ 83 (248)
..|+||||+|+..|+. +++++|+++|+++ +.+|..|.||||+|+..|+ .+++++|++. +.+++.+|..
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~-Gadin~~d~~ 113 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK-GADITALYKP 113 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT-TCCSSSCBGG
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHC-CCCCCccCCC
Confidence 6799999999999975 5999999999998 8899999999999999987 6889999998 5568999999
Q ss_pred CC-cHHHHHHHcCC-----hHHHHHHHH-HHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcc
Q 037085 84 GE-TALHLAVKKSR-----SDAFQALVD-EAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENS 147 (248)
Q Consensus 84 g~-t~lh~a~~~~~-----~~~~~~Ll~-~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~ 147 (248)
|. ||||+|+..+. .+++++|++ +|++ ++.+|..|.||||+|+..++.+++++|.++..
T Consensus 114 g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad------~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 114 YKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ------LLIKDKWGLTALEFVKRCQKPIALKMMEDYIK 178 (186)
T ss_dssp GTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC------TTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHH
T ss_pred cCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC------CcccCCCCCCHHHHHHHcCCHHHHHHHHHHHH
Confidence 99 99999998543 568999999 8988 99999999999999999999999999998765
No 95
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=3e-25 Score=155.73 Aligned_cols=111 Identities=20% Similarity=0.213 Sum_probs=85.4
Q ss_pred cCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcH
Q 037085 47 DNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTV 126 (248)
Q Consensus 47 ~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~ 126 (248)
+..|.||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+..++.+++++|+++|++ ++.+|..|+||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~d~~g~tp 76 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKG-EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD------INAPDKHHITP 76 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTT-CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC------TTCCCTTSCCH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcC-CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------CCcCCCCCCCH
Confidence 455677888888888888888888764 34677777788888888888888888888877776 77778888888
Q ss_pred hHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHH
Q 037085 127 LHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCN 170 (248)
Q Consensus 127 Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~ 170 (248)
||+|+..++.+++++|+++|+ +++.+|..|.||+++|.
T Consensus 77 L~~A~~~~~~~~v~~Ll~~ga------~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 77 LLSAVYEGHVSCVKLLLSKGA------DKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHHHHHHTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHCC
T ss_pred HHHHHHcCCHHHHHHHHHcCC------CCCCcCCCCCCHHHHhC
Confidence 888888888888888888876 67778888888888873
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=3.6e-25 Score=178.68 Aligned_cols=139 Identities=17% Similarity=0.143 Sum_probs=122.0
Q ss_pred CCCHHHHHHhCCCHHHHHHHHhcCcchhhh-----hcCCCCcHHHHHHHh---CCHHHHHHHHHhCchhhhhhccCCCcH
Q 037085 16 GETTMHLLSTDGDARMVRIFGENNRELCLE-----VDNSLMIPLHRAALE---GDSDVIRALVSICPESLEKLTSNGETA 87 (248)
Q Consensus 16 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-----~~~~g~t~L~~A~~~---g~~~~~~~Ll~~~~~~~~~~~~~g~t~ 87 (248)
..++|+.|+..|+.+.++.|++.+.++... .+..|.||||+|+.. |+.+++++|++.+ .+++.+|..|.||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g-advn~~d~~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS-SCTTCCCTTCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC-CCCCCCCCCCCCH
Confidence 346799999999999999999999987332 688999999999997 8999999999994 5688899999999
Q ss_pred HHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHH
Q 037085 88 LHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQ 167 (248)
Q Consensus 88 lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~ 167 (248)
||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+++|+ + .|.||||
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad------~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga------~------~g~tpLh 291 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRAL------VGTVNEAGETALDIARKKHHKECEELLEQAQA------G------TFAFPLH 291 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC------CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH------H------TTSSCCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC------C------CCCChhH
Confidence 9999999999999999999998 88999999999999999999999999999987 3 5899999
Q ss_pred HHHHcC
Q 037085 168 LCNANS 173 (248)
Q Consensus 168 ~a~~~~ 173 (248)
+|+..+
T Consensus 292 ~A~~~g 297 (301)
T 2b0o_E 292 VDYSWV 297 (301)
T ss_dssp ------
T ss_pred HHHhcC
Confidence 998774
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=1.6e-25 Score=173.02 Aligned_cols=170 Identities=22% Similarity=0.250 Sum_probs=129.2
Q ss_pred hhccCCCCHHHHHHhCCCHHHHHHHHhcCc--------------chhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchh
Q 037085 11 IKNQRGETTMHLLSTDGDARMVRIFGENNR--------------ELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPES 76 (248)
Q Consensus 11 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~--------------~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~ 76 (248)
..+..++++.++++..|+...+..+.+.+. ......+..|.||||+|+..|+.+++++|++.+ .+
T Consensus 20 l~d~~~~~~~el~~~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~ 98 (222)
T 3ehr_A 20 LYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNR-VG 98 (222)
T ss_dssp SSCCCCSSTTBCCCCTTCEEEEEECCSSSEEEEEETTEEEEEEHHHHHHHEEEESCHHHHHHHHTCHHHHHHHHHTT-CC
T ss_pred eCCcCCCCCCcccccCCCEEEEeccccchhHhcccCCcceeechhhccccccccccccccccccCcHHHHHHHHhCC-CC
Confidence 345566666666666665433322222110 112445778899999999999999999999984 55
Q ss_pred hhhhccCCCcHHHHHHHcCChHHHHHHHHH-HhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccc
Q 037085 77 LEKLTSNGETALHLAVKKSRSDAFQALVDE-AKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRI 155 (248)
Q Consensus 77 ~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 155 (248)
++.+|..|.||||+|+..|+.+++++|++. |++ ++.+|..|.||||+|+..|+.+++++|+++|+ ++
T Consensus 99 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga------~~ 166 (222)
T 3ehr_A 99 VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE------LNQQNKLGDTALHAAAWKGYADIVQLLLAKGA------RT 166 (222)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC------CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC------CS
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC------ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CC
Confidence 888899999999999999999999999998 777 89999999999999999999999999999998 89
Q ss_pred cccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCC
Q 037085 156 NTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLP 197 (248)
Q Consensus 156 ~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~ 197 (248)
+.+|..|+|||++|+.. +..++++.|+..|+.......
T Consensus 167 ~~~~~~g~t~l~~A~~~----~~~~~l~~l~~~~~~~~~~~~ 204 (222)
T 3ehr_A 167 DLRNIEKKLAFDMATNA----ACASLLKKKQGTDAVRTLSNA 204 (222)
T ss_dssp CCCCTTSCCHHHHCCSH----HHHHHHC--------------
T ss_pred ccccCCCCCHHHHhcch----hHHHHHHHHhccchhhhccch
Confidence 99999999999999865 899999999999998765443
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=3e-25 Score=155.75 Aligned_cols=114 Identities=17% Similarity=0.153 Sum_probs=103.7
Q ss_pred ccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHH
Q 037085 13 NQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAV 92 (248)
Q Consensus 13 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~ 92 (248)
+..|.|+||+|+..|+.++++.|++.+.++ +.+|..|.||||+|+..|+.+++++|++. +.+++.+|..|+||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLK-GADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHH
Confidence 567899999999999999999999999987 78899999999999999999999999998 4568889999999999999
Q ss_pred HcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCC
Q 037085 93 KKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNK 134 (248)
Q Consensus 93 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~ 134 (248)
..++.+++++|+++|++ ++.+|..|.||||+|...+
T Consensus 82 ~~~~~~~v~~Ll~~ga~------~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGAD------KTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHCCCHH
T ss_pred HcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHhCCHH
Confidence 99999999999999988 8899999999999995433
No 99
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.91 E-value=1.6e-23 Score=167.30 Aligned_cols=168 Identities=20% Similarity=0.203 Sum_probs=139.9
Q ss_pred hccCCCCHHHHHHhCCCHHHHHHHHhcCcc-------hh-------------hhh----------cCCCCcHHHHHHHhC
Q 037085 12 KNQRGETTMHLLSTDGDARMVRIFGENNRE-------LC-------------LEV----------DNSLMIPLHRAALEG 61 (248)
Q Consensus 12 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-------~~-------------~~~----------~~~g~t~L~~A~~~g 61 (248)
.|..+.+.++.+...|+..+.+++...-+. .. +.. .....++|+.|+..|
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~ 141 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR 141 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence 577889999999999998877766432211 00 000 001235799999999
Q ss_pred CHHHHHHHHHhCchh-----hhhhccCCCcHHHHHHHc---CChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhC
Q 037085 62 DSDVIRALVSICPES-----LEKLTSNGETALHLAVKK---SRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLN 133 (248)
Q Consensus 62 ~~~~~~~Ll~~~~~~-----~~~~~~~g~t~lh~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~ 133 (248)
+.+.++.++..+.+. ++..+..|.||||+|+.. ++.+++++|+++|++ ++.+|..|+||||+|+..
T Consensus 142 d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~------in~~d~~g~TpLh~A~~~ 215 (278)
T 1dcq_A 142 DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN------LDKQTGKGSTALHYCCLT 215 (278)
T ss_dssp CHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC------TTCCCTTCCCHHHHHHHT
T ss_pred ccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC------ccccCCCCCCHHHHHHHc
Confidence 999999999986553 334478899999999999 899999999999998 899999999999999999
Q ss_pred CcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCC
Q 037085 134 KLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQ 195 (248)
Q Consensus 134 ~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~ 195 (248)
|+.+++++|+++|+ |++.+|..|.||||+|+.. ++.+++++|+++|++....
T Consensus 216 g~~~~v~~Ll~~ga------d~~~~d~~g~tpL~~A~~~----~~~~~v~~Ll~~ga~~~~~ 267 (278)
T 1dcq_A 216 DNAECLKLLLRGKA------SIEIANESGETPLDIAKRL----KHEHCEELLTQALSGRFNS 267 (278)
T ss_dssp TCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHT----TCHHHHHHHHHHHTTCCCS
T ss_pred CCHHHHHHHHHcCC------CCCCccCCCCCHHHHHHHc----CCHHHHHHHHHcCCCCCCc
Confidence 99999999999998 8999999999999999988 7899999999999975443
No 100
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=2.8e-24 Score=177.56 Aligned_cols=150 Identities=15% Similarity=0.085 Sum_probs=115.9
Q ss_pred hccCCCCHHHHHHhC-CCHHHHHHHHhcCcchhhhhc--CCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHH
Q 037085 12 KNQRGETTMHLLSTD-GDARMVRIFGENNRELCLEVD--NSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETAL 88 (248)
Q Consensus 12 ~~~~g~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~~--~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~l 88 (248)
.+..+.|+||.|+.. |+.++++.|++.+.++ +..+ ..|.||||+|+..|+.+++++|++. +.+++..|..|.|||
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~-Gadvn~~d~~G~TpL 272 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQN-GANVNQADSAGRGPL 272 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCCHH
Confidence 344566799999999 9999999999999988 6666 8899999999999999999999998 456888999999999
Q ss_pred HHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHH
Q 037085 89 HLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQL 168 (248)
Q Consensus 89 h~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~ 168 (248)
|+|+..++.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|++.+... .+....+..+.|++++
T Consensus 273 h~A~~~g~~~~v~~LL~~Gad------~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~---~~~~~~~~~~~t~l~i 343 (368)
T 3jue_A 273 HHATILGHTGLACLFLKRGAD------LGARDSEGRDPLTIAMETANADIVTLLRLAKMRE---AEAAQGQAGDETYLDI 343 (368)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------
T ss_pred HHHHHcCcHHHHHHHHHCcCC------CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCc---ccccccCCCCCCHHHH
Confidence 999999999999999999988 8899999999999999999999999999887532 1344556678888887
Q ss_pred HHHc
Q 037085 169 CNAN 172 (248)
Q Consensus 169 a~~~ 172 (248)
+...
T Consensus 344 ~~~~ 347 (368)
T 3jue_A 344 FRDF 347 (368)
T ss_dssp ----
T ss_pred HHHH
Confidence 7543
No 101
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=6.2e-25 Score=164.81 Aligned_cols=113 Identities=24% Similarity=0.356 Sum_probs=105.4
Q ss_pred hcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhcccccccccccc-CCCC
Q 037085 46 VDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKD-KEGN 124 (248)
Q Consensus 46 ~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~-~~g~ 124 (248)
.+..|.||||+|+..|+.++++.|++ +.+++.+|..|.||||+|+..|+.+++++|+++|++ ++.++ ..|+
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~~~~~g~ 111 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD------LDHRDMRGGL 111 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------TTCCCSSSSC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCcCCCCCCC
Confidence 35678999999999999999999999 446888999999999999999999999999999988 78888 8999
Q ss_pred cHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHc
Q 037085 125 TVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNAN 172 (248)
Q Consensus 125 t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~ 172 (248)
||||+|+..|+.+++++|+++|+ +++.+|..|+||||+|+..
T Consensus 112 tpL~~A~~~~~~~~v~~Ll~~ga------~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 112 TALHMAAGYVRPEVVEALVELGA------DIEVEDERGLTALELAREI 153 (183)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTC------CTTCCCTTSCCHHHHHHHH
T ss_pred CHHHHHHhcCcHHHHHHHHHcCC------CCcCCCCCCCCHHHHHHHh
Confidence 99999999999999999999998 8999999999999999875
No 102
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=1.2e-25 Score=176.37 Aligned_cols=141 Identities=21% Similarity=0.276 Sum_probs=121.5
Q ss_pred cCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHH
Q 037085 14 QRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVK 93 (248)
Q Consensus 14 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~ 93 (248)
..+.+++++++..|+.+.+..+...+.+. +..|.||||+|+..|+.++++.|++ +.+++.+|..|.||||+|+.
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~ 86 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSSYIAADV----VSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAG 86 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGGGSCHHH----HHHHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHH
T ss_pred CCCccHHHHHHHcCCCccccccccccccc----ccCCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHH
Confidence 44666677777777766655544444333 4678999999999999999999999 44688899999999999999
Q ss_pred cCChHHHHHHHHHHhcccccccccccc-CCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHc
Q 037085 94 KSRSDAFQALVDEAKSHRKEHLFTWKD-KEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNAN 172 (248)
Q Consensus 94 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~ 172 (248)
.|+.+++++|+++|++ ++.++ ..|.||||+|+..|+.+++++|+++|+ +++.+|..|.||||+|+..
T Consensus 87 ~g~~~~v~~Ll~~ga~------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga------~~~~~d~~g~t~l~~A~~~ 154 (244)
T 3ui2_A 87 LGSDKCVRLLAEAGAD------LDHRDMRGGLTALHMAAGYVRPEVVEALVELGA------DIEVEDERGLTALELAREI 154 (244)
T ss_dssp HTCHHHHHHHHHTTCC------TTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTC------CTTCCCTTCCCHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCC------CCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC------CCCCCCCCCCcHHHHHHHH
Confidence 9999999999999988 88888 889999999999999999999999998 8999999999999999864
No 103
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.89 E-value=1.2e-22 Score=164.00 Aligned_cols=134 Identities=23% Similarity=0.262 Sum_probs=118.3
Q ss_pred CcHHHHHHHhCCHHHHHHHHHhCchhhhh------hccCCCcHHHHHHHc---CChHHHHHHHHHHhccccccccccccC
Q 037085 51 MIPLHRAALEGDSDVIRALVSICPESLEK------LTSNGETALHLAVKK---SRSDAFQALVDEAKSHRKEHLFTWKDK 121 (248)
Q Consensus 51 ~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~------~~~~g~t~lh~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 121 (248)
.++|+.|+..|+.+.++.|+..+.+ ++. .+..|.||||+|+.. ++.+++++|+++|++ ++.+|.
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d-~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad------vn~~d~ 224 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH------LDAKAA 224 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCC-TTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC------TTCCCT
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCc-ccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC------CCCCCC
Confidence 3569999999999999999988554 555 688999999999997 899999999999988 899999
Q ss_pred CCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCCCCCCCC
Q 037085 122 EGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQLPDAGS 201 (248)
Q Consensus 122 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~ 201 (248)
.|+||||+|+..|+.+++++|+++|+ +++.+|..|.|||++|+.. ++.+++++|+++|++. ..
T Consensus 225 ~G~TpLh~A~~~g~~~~v~~Ll~~ga------d~~~~d~~G~TpL~~A~~~----~~~~iv~~Ll~~ga~~-------g~ 287 (301)
T 2b0o_E 225 DGNTALHYAALYNQPDCLKLLLKGRA------LVGTVNEAGETALDIARKK----HHKECEELLEQAQAGT-------FA 287 (301)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTC------CCSCCCTTSCCHHHHHHHH----TCHHHHHHHHHHHHHT-------TS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCC------CCCCcCCCCCCHHHHHHHc----CCHHHHHHHHHhcCCC-------CC
Confidence 99999999999999999999999998 8999999999999999988 7889999999999983 23
Q ss_pred ccccccc
Q 037085 202 ANVSWNQ 208 (248)
Q Consensus 202 ~~~~~~~ 208 (248)
+|++++.
T Consensus 288 tpLh~A~ 294 (301)
T 2b0o_E 288 FPLHVDY 294 (301)
T ss_dssp SCCC---
T ss_pred ChhHHHH
Confidence 4666654
No 104
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=4.1e-23 Score=177.71 Aligned_cols=135 Identities=18% Similarity=0.174 Sum_probs=115.4
Q ss_pred CCHHHHHHhCCCHHHHHHHHhcCcchhhhh------cCCCCcHHHHHHH---hCCHHHHHHHHHhCchhhhhhccCCCcH
Q 037085 17 ETTMHLLSTDGDARMVRIFGENNRELCLEV------DNSLMIPLHRAAL---EGDSDVIRALVSICPESLEKLTSNGETA 87 (248)
Q Consensus 17 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~------~~~g~t~L~~A~~---~g~~~~~~~Ll~~~~~~~~~~~~~g~t~ 87 (248)
.+.||.|+..|+.++++.|++.+.++ +.. +..|.||||+||. .|+.+++++|++.+ .+++.+|..|.||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g-a~vn~~d~~g~Tp 210 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNTA 210 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS-CCTTCCCSSSCCH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC-CCCCccCCCCCcH
Confidence 36799999999999999999999987 444 7899999999977 89999999999985 5689999999999
Q ss_pred HHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHH
Q 037085 88 LHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQ 167 (248)
Q Consensus 88 lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~ 167 (248)
||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|+ +++. +|+|
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga------~~~~------~~~h 272 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRAL------VGTVNEAGETALDIARKKHHKECEELLEQAQA------GTFA------FPLH 272 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCC------CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--------------------
T ss_pred HHHHHHcCCHHHHHHHHHcCCC------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCC------CCCC------Ccce
Confidence 9999999999999999999998 89999999999999999999999999999998 5554 5666
Q ss_pred HHHH
Q 037085 168 LCNA 171 (248)
Q Consensus 168 ~a~~ 171 (248)
.+..
T Consensus 273 ~~~~ 276 (497)
T 3lvq_E 273 VDYS 276 (497)
T ss_dssp ----
T ss_pred eecc
Confidence 6543
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=2.2e-22 Score=160.64 Aligned_cols=125 Identities=21% Similarity=0.187 Sum_probs=115.5
Q ss_pred CCHHHHHHhCCCHHHHHHHHhcCcchh-----hhhcCCCCcHHHHHHHh---CCHHHHHHHHHhCchhhhhhccCCCcHH
Q 037085 17 ETTMHLLSTDGDARMVRIFGENNRELC-----LEVDNSLMIPLHRAALE---GDSDVIRALVSICPESLEKLTSNGETAL 88 (248)
Q Consensus 17 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~-----~~~~~~g~t~L~~A~~~---g~~~~~~~Ll~~~~~~~~~~~~~g~t~l 88 (248)
.++|+.|+..|+.+.++.+++.+.++. ...+..|.||||+|+.. |+.+++++|++.+ .+++.+|..|.|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g-a~in~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-GNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-SCTTCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC-CCccccCCCCCCHH
Confidence 368999999999999999999998853 33488899999999999 8999999999995 56889999999999
Q ss_pred HHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhccc
Q 037085 89 HLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSN 148 (248)
Q Consensus 89 h~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~ 148 (248)
|+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKAS------IEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHcCCC------CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999998 899999999999999999999999999999984
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=1.7e-22 Score=134.61 Aligned_cols=91 Identities=32% Similarity=0.474 Sum_probs=56.0
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHH
Q 037085 50 LMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHL 129 (248)
Q Consensus 50 g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~ 129 (248)
|.||||+|+..|+.+++++|++. +.+++.+|..|.||||+|+..++.+++++|+++|++ ++.+|..|.||||+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~-g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------~~~~d~~g~t~l~~ 74 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------VNAKDKNGRTPLHL 74 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSCCHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------CCccCCCCCCHHHH
Confidence 55666666666666666666665 334556666666666666666666666666666555 55566666666666
Q ss_pred HHhCCcHHHHHHHHhhcc
Q 037085 130 ATLNKLKQIVELLIRENS 147 (248)
Q Consensus 130 A~~~~~~~~v~~Ll~~g~ 147 (248)
|+..|+.+++++|+++|+
T Consensus 75 A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HHHTTCHHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHcCC
Confidence 666666666666666554
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.88 E-value=1.9e-22 Score=173.57 Aligned_cols=128 Identities=24% Similarity=0.281 Sum_probs=114.6
Q ss_pred CcHHHHHHHhCCHHHHHHHHHhCchhhhhh------ccCCCcHHHHHHH---cCChHHHHHHHHHHhccccccccccccC
Q 037085 51 MIPLHRAALEGDSDVIRALVSICPESLEKL------TSNGETALHLAVK---KSRSDAFQALVDEAKSHRKEHLFTWKDK 121 (248)
Q Consensus 51 ~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~------~~~g~t~lh~a~~---~~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 121 (248)
.+.||.|+..|+.++++.|++.+. +++.. +..|.||||+|+. .|+.+++++|+++|++ ++.+|.
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~-~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~------vn~~d~ 205 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQ-DFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH------LDAKAA 205 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTC-CSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC------TTCCCS
T ss_pred HHHHHHHHhccCHHHHHHHHhhcc-cccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC------CCccCC
Confidence 367999999999999999999864 46555 7899999999976 8999999999999998 899999
Q ss_pred CCCcHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcCCC
Q 037085 122 EGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQSPQ 195 (248)
Q Consensus 122 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~~~ 195 (248)
.|+||||+|+..|+.+++++|+++|+ |++.+|..|.||||+|+.. ++.+++++|+++|++++..
T Consensus 206 ~g~TpLh~A~~~g~~~~v~~Ll~~ga------~~~~~d~~g~tpl~~A~~~----~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 206 DGNTALHYAALYNQPDCLKLLLKGRA------LVGTVNEAGETALDIARKK----HHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp SSCCHHHHHTTTTCHHHHHHHHHTCC------CCSCCCTTCCCHHHHHHHT----TCHHHHHHHHHTCC-----
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCC------CCCCcCCCCCCHHHHHHHc----CCHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999998 8999999999999999988 7899999999999998774
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=2.5e-22 Score=133.73 Aligned_cols=92 Identities=26% Similarity=0.451 Sum_probs=85.4
Q ss_pred CCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHc
Q 037085 15 RGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKK 94 (248)
Q Consensus 15 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~ 94 (248)
+|+||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHc
Confidence 5899999999999999999999999998 889999999999999999999999999984 55888999999999999999
Q ss_pred CChHHHHHHHHHHh
Q 037085 95 SRSDAFQALVDEAK 108 (248)
Q Consensus 95 ~~~~~~~~Ll~~~~ 108 (248)
++.+++++|+++|+
T Consensus 79 ~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 79 GHLEVVKLLLEAGA 92 (93)
T ss_dssp TCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCC
Confidence 99999999998875
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.87 E-value=1.1e-22 Score=140.80 Aligned_cols=109 Identities=27% Similarity=0.355 Sum_probs=95.6
Q ss_pred hhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCC
Q 037085 45 EVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGN 124 (248)
Q Consensus 45 ~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~ 124 (248)
.+|.+|.||||+|+..|+.+++++|++.+ ..++.+|..|.||||+|+..++.+++++|+++|++ ++.+|..|.
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------~~~~d~~g~ 76 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKG-ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD------VNARSKDGN 76 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTT-CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC------TTCCCTTCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC------CcccCCCCC
Confidence 46788999999999999999999999884 45778889999999999999999999999998887 888999999
Q ss_pred cHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHH
Q 037085 125 TVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTAL 166 (248)
Q Consensus 125 t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl 166 (248)
||||+|+..++.+++++|+++|+ +++.++..|.+|-
T Consensus 77 tpl~~A~~~~~~~~~~~Ll~~ga------~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 77 TPEHLAKKNGHHEIVKLLDAKGA------DVNARSWGSSHHH 112 (115)
T ss_dssp CTTHHHHTTTCHHHHHHHHTTSS------SHHHHSCCCC---
T ss_pred CHHHHHHHCCCHHHHHHHHHcCC------CCCcCCccccccc
Confidence 99999999999999999999998 8899999998874
No 110
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=3.2e-22 Score=165.23 Aligned_cols=129 Identities=15% Similarity=0.153 Sum_probs=116.7
Q ss_pred CCCCcHHHHHHHh-CCHHHHHHHHHhCchhhhhhc--cCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCC
Q 037085 48 NSLMIPLHRAALE-GDSDVIRALVSICPESLEKLT--SNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGN 124 (248)
Q Consensus 48 ~~g~t~L~~A~~~-g~~~~~~~Ll~~~~~~~~~~~--~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~ 124 (248)
..+.|+||.|+.. |+.+++++|++.+ .+++..+ ..|.||||+|+..++.+++++|+++|++ ++.+|..|+
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~G-advn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad------vn~~d~~G~ 269 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHG-ADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN------VNQADSAGR 269 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTT-CCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------TTCCCTTSC
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcC-CCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC------CCCCCCCCC
Confidence 3456899999999 9999999999985 4577777 8899999999999999999999999988 899999999
Q ss_pred cHhHHHHhCCcHHHHHHHHhhcccccccccccccCCCCCCHHHHHHHcCCCchHHHHHHHHHHhhhhcC
Q 037085 125 TVLHLATLNKLKQIVELLIRENSNRRIMIRINTVNKQGQTALQLCNANSQDSVFKEIGWIIQRAVAQQS 193 (248)
Q Consensus 125 t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~i~~~L~~~g~~~~ 193 (248)
||||+|+..|+.+++++|+++|+ +++.+|..|.||||+|+.. ++.+++++|+.++....
T Consensus 270 TpLh~A~~~g~~~~v~~LL~~Ga------d~~~~d~~G~TpL~~A~~~----g~~~iv~lLl~~~~~~~ 328 (368)
T 3jue_A 270 GPLHHATILGHTGLACLFLKRGA------DLGARDSEGRDPLTIAMET----ANADIVTLLRLAKMREA 328 (368)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTC------CTTCCCTTSCCHHHHHHHT----TCHHHHHHHHHHHC---
T ss_pred CHHHHHHHcCcHHHHHHHHHCcC------CCCCcCCCCCCHHHHHHHC----CCHHHHHHHHHcCCCcc
Confidence 99999999999999999999998 8999999999999999988 78999999999886543
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.87 E-value=4e-23 Score=171.22 Aligned_cols=154 Identities=10% Similarity=0.075 Sum_probs=122.3
Q ss_pred CCCHHHHHHh-CCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchh--hhhhccCCCcHHHHHH
Q 037085 16 GETTMHLLST-DGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPES--LEKLTSNGETALHLAV 92 (248)
Q Consensus 16 g~t~L~~A~~-~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~--~~~~~~~g~t~lh~a~ 92 (248)
+.+++++|.. .++.++++++++++.+. .||||+|+..|+.+++++|++.+... ....+..|.||||+|+
T Consensus 65 ~ll~~~~a~~~~~~~~~~~~l~~~g~~~--------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa 136 (376)
T 2aja_A 65 QLLCLYYAHYNRNAKQLWSDAHKKGIKS--------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAA 136 (376)
T ss_dssp HHHHHHHHHTTTTCTTHHHHHHHHTCCH--------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHcCCCc--------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHH
Confidence 3457777776 46778888888776654 49999999999999999999985421 1234567889999999
Q ss_pred HcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhcccccccccccc--cCCCCCCHHHHHH
Q 037085 93 KKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINT--VNKQGQTALQLCN 170 (248)
Q Consensus 93 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~--~~~~g~tpl~~a~ 170 (248)
..|+.+++++|+++|++... ..++.. + .||||+|+..|+.++|++|+++|+ +++. .|..|.||||+|+
T Consensus 137 ~~G~~eiv~~Ll~~gad~~~-~~i~~~--~-~TpLh~Aa~~G~~eiv~~Ll~~ga------~~~~~~~d~~g~TpL~~Aa 206 (376)
T 2aja_A 137 ENGHLHVLNRLCELAPTEIM-AMIQAE--N-YHAFRLAAENGHLHVLNRLCELAP------TEATAMIQAENYYAFRWAA 206 (376)
T ss_dssp HTTCHHHHHHHHHSCTTTHH-HHHSHH--H-HHHHHHHHHTTCHHHHHHHHHSCG------GGHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCccc-cccCCC--C-CCHHHHHHHCCCHHHHHHHHHcCC------ccchhccCCCCCCHHHHHH
Confidence 99999999999999853110 002223 3 999999999999999999999998 6666 8888999999999
Q ss_pred -HcCCCchHHHHHHHHHHhhhh
Q 037085 171 -ANSQDSVFKEIGWIIQRAVAQ 191 (248)
Q Consensus 171 -~~~~~~~~~~i~~~L~~~g~~ 191 (248)
.. ++.+++++|++.|+.
T Consensus 207 ~~~----G~~eiv~~Ll~~ga~ 224 (376)
T 2aja_A 207 VGR----GHHNVINFLLDCPVM 224 (376)
T ss_dssp STT----CCHHHHHHHTTSHHH
T ss_pred HHC----CCHHHHHHHHhCCCc
Confidence 88 789999999998865
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.85 E-value=4.6e-22 Score=137.71 Aligned_cols=109 Identities=18% Similarity=0.268 Sum_probs=99.5
Q ss_pred hhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHH
Q 037085 11 IKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSNGETALHL 90 (248)
Q Consensus 11 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~ 90 (248)
.+|.+|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|++.+ ..++.+|..|.||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKG-ADVNARSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTT-CCTTCCCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCCHHHH
Confidence 46889999999999999999999999999987 788999999999999999999999999984 5588889999999999
Q ss_pred HHHcCChHHHHHHHHHHhccccccccccccCCCCcHh
Q 037085 91 AVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVL 127 (248)
Q Consensus 91 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~L 127 (248)
|+..++.+++++|+++|++ ++.++..|.+|-
T Consensus 82 A~~~~~~~~~~~Ll~~ga~------~n~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGAD------VNARSWGSSHHH 112 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSS------HHHHSCCCC---
T ss_pred HHHCCCHHHHHHHHHcCCC------CCcCCccccccc
Confidence 9999999999999999998 888898888873
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=1.7e-19 Score=123.81 Aligned_cols=98 Identities=20% Similarity=0.239 Sum_probs=54.4
Q ss_pred cCchhHhhhccCCCCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHHHHHHHhCCHHHHHHHHHhCchhhhhhccC
Q 037085 4 LWPQLASIKNQRGETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPLHRAALEGDSDVIRALVSICPESLEKLTSN 83 (248)
Q Consensus 4 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~ 83 (248)
+.|......|.+|.|+||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+..|+.+++++|++. +.+++.+|..
T Consensus 12 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~-ga~~~~~d~~ 89 (110)
T 2zgd_A 12 GLVPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEA-GADVXAQDKF 89 (110)
T ss_dssp C---------CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTT
T ss_pred CCCCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccccC
Confidence 344555555666666666666666666666666666555 45566666666666666666666666665 3335555666
Q ss_pred CCcHHHHHHHcCChHHHHHH
Q 037085 84 GETALHLAVKKSRSDAFQAL 103 (248)
Q Consensus 84 g~t~lh~a~~~~~~~~~~~L 103 (248)
|.||||+|+..++.+++++|
T Consensus 90 g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 90 GKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp SCCHHHHHHHHTCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHh
Confidence 66666666666666666554
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.79 E-value=3.2e-19 Score=122.43 Aligned_cols=91 Identities=26% Similarity=0.368 Sum_probs=51.7
Q ss_pred hhccCCCcHHHHHHHcCChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHHHHHHHHhhccccccccccccc
Q 037085 79 KLTSNGETALHLAVKKSRSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQIVELLIRENSNRRIMIRINTV 158 (248)
Q Consensus 79 ~~~~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~ 158 (248)
..+.+|.|+||+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|+++|+ +++.+
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga------~~~~~ 86 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGAD------VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGA------DVXAQ 86 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC------CTTCC
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCC------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC------Ccccc
Confidence 3455556666666666666666666655554 55555666666666666666666666666554 55556
Q ss_pred CCCCCCHHHHHHHcCCCchHHHHHHHH
Q 037085 159 NKQGQTALQLCNANSQDSVFKEIGWII 185 (248)
Q Consensus 159 ~~~g~tpl~~a~~~~~~~~~~~i~~~L 185 (248)
|..|+||||+|+.. ++.+++++|
T Consensus 87 d~~g~tpl~~A~~~----~~~~~~~~L 109 (110)
T 2zgd_A 87 DKFGKTAFDISIDN----GNEDLAEIL 109 (110)
T ss_dssp CTTSCCHHHHHHHH----TCHHHHHHH
T ss_pred ccCCCcHHHHHHHc----CCHHHHHHh
Confidence 66666666666555 445555544
No 115
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=42.68 E-value=88 Score=22.36 Aligned_cols=106 Identities=8% Similarity=0.052 Sum_probs=62.4
Q ss_pred CCHHHHHHhCCCHHHHHHHHhcCcchhhhhcCCCCcHH-HHHHHhCCHHHHHHHHHhCchhhhhhccCCCcHHHHHHHcC
Q 037085 17 ETTMHLLSTDGDARMVRIFGENNRELCLEVDNSLMIPL-HRAALEGDSDVIRALVSICPESLEKLTSNGETALHLAVKKS 95 (248)
Q Consensus 17 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L-~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~lh~a~~~~ 95 (248)
++-|-.|...|+++....+.+...+. .-+.-| ..|...|+.++++.-..+.++ . . ..+.+....|
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l~~~------~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D-~-----~--~L~~Ly~~tg 74 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKLNDS------ITWERLIQEALAQGNASLAEMIYQTQHS-F-----D--KLSFLYLVTG 74 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHCCH------HHHHHHHHHHHHTTCHHHHHHHHHHTTC-H-----H--HHHHHHHHHT
T ss_pred HHHHHHHHhcCCHHHHHHHHHHhCCH------HHHHHHHHHHHHcCChHHHHHHHHHhCC-H-----H--HHHHHHHHhC
Confidence 45577888888888876665432111 112222 356678888888888777433 1 1 2334444567
Q ss_pred ChHHHHHHHHHHhccccccccccccCCCCcHhHHHHhCCcHH-HHHHHHhhc
Q 037085 96 RSDAFQALVDEAKSHRKEHLFTWKDKEGNTVLHLATLNKLKQ-IVELLIREN 146 (248)
Q Consensus 96 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~~~~~-~v~~Ll~~g 146 (248)
+.+-++.+.+.. ....+-+.+++.+...|+.+ .+++|.+.|
T Consensus 75 ~~e~L~kla~iA----------~~~g~~n~af~~~l~lGdv~~~i~lL~~~~ 116 (177)
T 3mkq_B 75 DVNKLSKMQNIA----------QTREDFGSMLLNTFYNNSTKERSSIFAEGG 116 (177)
T ss_dssp CHHHHHHHHHHH----------HHTTCHHHHHHHHHHHTCHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHH----------HHCccHHHHHHHHHHcCCHHHHHHHHHHCC
Confidence 776666554431 23344556778877777664 677776654
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=41.62 E-value=47 Score=27.35 Aligned_cols=26 Identities=35% Similarity=0.511 Sum_probs=20.8
Q ss_pred cCCCcHHHHHHHcCChHHHHHHHHHH
Q 037085 82 SNGETALHLAVKKSRSDAFQALVDEA 107 (248)
Q Consensus 82 ~~g~t~lh~a~~~~~~~~~~~Ll~~~ 107 (248)
..|.|-+|+|+++.+.+++..|+..+
T Consensus 67 ~~g~tlvhlair~~r~~~l~~ll~~~ 92 (454)
T 3zrh_A 67 DVGYTLVHLAIRFQRQDMLAILLTEV 92 (454)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccCchhhhhhhhhhhhhHHHHhhhcc
Confidence 35888899999998888888887643
No 117
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=40.30 E-value=26 Score=17.95 Aligned_cols=18 Identities=22% Similarity=0.353 Sum_probs=12.8
Q ss_pred HHHHHhCCCHHHHHHHHh
Q 037085 20 MHLLSTDGDARMVRIFGE 37 (248)
Q Consensus 20 L~~A~~~g~~~~v~~Ll~ 37 (248)
+..||..|+++.++.|-.
T Consensus 17 iyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHTTSCHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHH
Confidence 466777888887777643
No 118
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=35.51 E-value=82 Score=25.97 Aligned_cols=51 Identities=12% Similarity=0.158 Sum_probs=39.9
Q ss_pred HHHhCCCHHHHHHHHhcCcchhhhh-------------cCCCCcHHHHHHHhCCHHHHHHHHHh
Q 037085 22 LLSTDGDARMVRIFGENNRELCLEV-------------DNSLMIPLHRAALEGDSDVIRALVSI 72 (248)
Q Consensus 22 ~A~~~g~~~~v~~Ll~~~~~~~~~~-------------~~~g~t~L~~A~~~g~~~~~~~Ll~~ 72 (248)
..+..|+...|+..+..+.+...+. -.-|.|-+|+|++..+.+++..|+..
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 3445699999999998887653211 23589999999999999999999974
No 119
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=26.70 E-value=44 Score=14.80 Aligned_cols=15 Identities=20% Similarity=0.549 Sum_probs=11.8
Q ss_pred hcCCCCccCCCCCCC
Q 037085 234 TCNLPDSFLKEDTLA 248 (248)
Q Consensus 234 ~~~~pgg~~~~~~~~ 248 (248)
..|+|-.|.++.|+|
T Consensus 4 pmtlpenyfserpyh 18 (26)
T 2jrw_A 4 PMTLPENYFSERPYH 18 (26)
T ss_dssp CCCCSSSSCCSSSCC
T ss_pred ccccchhhcccCCCC
Confidence 457888999888875
Done!