BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037089
(211 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P93025|PHOT2_ARATH Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=1 SV=2
Length = 915
Score = 120 bits (300), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 110/206 (53%), Gaps = 47/206 (22%)
Query: 7 SPHDQSAGKDQQRPIEVFQPKASHDIGQSSGTNEDLHTQALKAFTTTSTNKWMAFEGESG 66
SP + + ++R +E+F P + ++ G+ L S++KWM F+
Sbjct: 9 SPLNDAESLSERRSLEIFNPSSGK---ETHGSTSSSSKPPLDGNNKGSSSKWMEFQD--- 62
Query: 67 SYPKIKVSDESNGRFFNEKKAVDVDRIFTGANIAERTAEWGL-VVKSDVLGEG-TFKAVN 124
A I ERTAEWGL VK D +G +FK
Sbjct: 63 -----------------------------SAKITERTAEWGLSAVKPDSGDDGISFKL-- 91
Query: 125 LRKPSGDGDRSKNSSERFTIDSTRTSEESERGAFPRVSEELKAALATLQQTFVVSDATKP 184
S + +RSKN + S+ S SE GAFPRVS+ELK AL+TLQQTFVVSDAT+P
Sbjct: 92 ----SSEVERSKN----MSRRSSEESTSSESGAFPRVSQELKTALSTLQQTFVVSDATQP 143
Query: 185 DCPIMYASSGFFSMTGYSSKEVIGRN 210
CPI+YASSGFF+MTGYSSKE++GRN
Sbjct: 144 HCPIVYASSGFFTMTGYSSKEIVGRN 169
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 164 ELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
+L L +++ FV+SD PD PI++AS F +T YS +E++GRN
Sbjct: 379 DLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYSREEILGRN 425
>sp|O48963|PHOT1_ARATH Phototropin-1 OS=Arabidopsis thaliana GN=PHOT1 PE=1 SV=1
Length = 996
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 89/137 (64%), Gaps = 12/137 (8%)
Query: 85 KKAVDVDRIFTGANIAE-RTAEWGLVVKSDVLGEGTFKAVNLRKPSG---DGDRSKNSSE 140
KK + ++ A AE R AEWGLV+K+D G + V +R G D + K +S+
Sbjct: 98 KKTITAEKPQKSAVAAEQRAAEWGLVLKTDT-KTGKPQGVGVRNSGGTENDPNGKKTTSQ 156
Query: 141 RFTIDSTRTSEESE-------RGAFPRVSEELKAALATLQQTFVVSDATKPDCPIMYASS 193
R + +S R+S E R PRVSE+LK AL+T QQTFVVSDATKPD PIMYAS+
Sbjct: 157 RNSQNSCRSSGEMSDGDVPGGRSGIPRVSEDLKDALSTFQQTFVVSDATKPDYPIMYASA 216
Query: 194 GFFSMTGYSSKEVIGRN 210
GFF+MTGY+SKEV+GRN
Sbjct: 217 GFFNMTGYTSKEVVGRN 233
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 164 ELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
+L L +++ FV++D PD PI++AS F +T YS +E++GRN
Sbjct: 465 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN 511
>sp|Q2RBR1|PHT1B_ORYSJ Phototropin-1B OS=Oryza sativa subsp. japonica GN=PHOT1B PE=1 SV=2
Length = 921
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 75/110 (68%), Gaps = 10/110 (9%)
Query: 101 ERTAEWGLVVKSDVLGEGTFKAVNLRKPSGDGDRSKNSSERFTIDSTRTSEESERGAFPR 160
+R AEWGLV+++D G + V+ R SG ++ SSE ++ A PR
Sbjct: 73 QRAAEWGLVLQTD-HHTGLPQGVSARPSSGS---ARTSSE------DNPQQQQSAAAIPR 122
Query: 161 VSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
VSEEL+AAL+ QQTFVVSDAT P+ PIMYAS+GFF+MTGY+SKEV+GRN
Sbjct: 123 VSEELRAALSVFQQTFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRN 172
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 164 ELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
+L L +++ FV++D PD PI++AS F +T Y+ +E++GRN
Sbjct: 403 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRN 449
>sp|Q2QYY8|PHT1A_ORYSJ Phototropin-1A OS=Oryza sativa subsp. japonica GN=PHOT1A PE=1 SV=2
Length = 921
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 75/110 (68%), Gaps = 10/110 (9%)
Query: 101 ERTAEWGLVVKSDVLGEGTFKAVNLRKPSGDGDRSKNSSERFTIDSTRTSEESERGAFPR 160
+R AEWGLV+++D G + V+ R SG ++ SSE ++ A PR
Sbjct: 73 QRAAEWGLVLQTD-HHTGLPQGVSARPSSGS---ARTSSE------DNPQQQQSAAAIPR 122
Query: 161 VSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
VSEEL+AAL+ QQTFVVSDAT P+ PIMYAS+GFF+MTGY+SKEV+GRN
Sbjct: 123 VSEELRAALSAFQQTFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRN 172
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 164 ELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
+L L +++ FV++D PD PI++AS F +T Y+ +E++GRN
Sbjct: 403 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRN 449
>sp|Q9ST27|PHOT2_ORYSJ Phototropin-2 OS=Oryza sativa subsp. japonica GN=PHOT2 PE=1 SV=1
Length = 907
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 50/54 (92%)
Query: 157 AFPRVSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
+ PRVS+ELK AL++LQQTFVVSDAT+PDCPI+YAS GFF+MTGYS +EV+GRN
Sbjct: 85 SLPRVSQELKDALSSLQQTFVVSDATRPDCPIIYASEGFFTMTGYSPREVVGRN 138
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 151 EESERGAFPRVSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
E +ER R +L L +++ FV++D PD PI++AS F +T Y+ +E++GRN
Sbjct: 365 ERAEREKDIRQGIDLATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRN 424
>sp|O64511|TLOV1_ARATH Protein TWIN LOV 1 OS=Arabidopsis thaliana GN=TLP1 PE=1 SV=2
Length = 399
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 161 VSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
+S L +L ++Q+FV+++ PD PI+YAS F ++TGY +EV+G+N
Sbjct: 246 LSSSLVISLGRIKQSFVLTNPCLPDMPIIYASDAFLTLTGYKRQEVLGQN 295
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 165 LKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
+K AL L F ++D PI++AS GF MTGYS +EVIGRN
Sbjct: 28 IKEALEELPHNFTITDPFISGHPIVFASLGFLKMTGYSREEVIGRN 73
>sp|Q01371|WC1_NEUCR White collar 1 protein OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=wc-1
PE=2 SV=2
Length = 1167
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 160 RVSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
R +LK + FVV D T DCPI+Y S F ++TGYS E++GRN
Sbjct: 377 RKDPKLKLGAVDMSCAFVVCDVTLNDCPIIYVSDNFQNLTGYSRHEIVGRN 427
>sp|Q2NCA3|LVHK1_ERYLH Blue-light-activated histidine kinase 1 OS=Erythrobacter litoralis
(strain HTCC2594) GN=ELI_02980 PE=1 SV=1
Length = 360
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 169 LATLQQT---FVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
L T QQT +SD +PDCP++Y + F +TGY+ +E++GRN
Sbjct: 40 LETTQQTRLAICISDPHQPDCPVVYVNQAFLDLTGYAREEIVGRN 84
>sp|Q5Z8K3|ADO1_ORYSJ Adagio-like protein 1 OS=Oryza sativa subsp. japonica
GN=Os06g0694000 PE=2 SV=1
Length = 630
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 176 FVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
VV+DA +PDCPI+Y + GF TGY ++EV+GRN
Sbjct: 60 LVVTDALEPDCPIIYVNCGFEEATGYRAEEVLGRN 94
>sp|Q4ZSY3|LOVHK_PSEU2 Blue-light-activated protein OS=Pseudomonas syringae pv. syringae
(strain B728a) GN=Psyr_2700 PE=3 SV=1
Length = 534
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 167 AALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRNW 211
AA+ T + +V+D +PD PI++A+ F MTGY+S+E+IG N
Sbjct: 26 AAVETTRMPMIVTDPNRPDNPIIFANRAFLEMTGYASEEIIGSNC 70
>sp|Q94BT6|ADO1_ARATH Adagio protein 1 OS=Arabidopsis thaliana GN=ADO1 PE=1 SV=2
Length = 609
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 145 DSTRTSEESERGAFP---RVSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGY 201
D++ +++ E G FP + + L T FVV+DA +PD PI+Y ++ F +TGY
Sbjct: 13 DASSLADDEEGGLFPGGGPIPYPVGNLLHTAPCGFVVTDAVEPDQPIIYVNTVFEMVTGY 72
Query: 202 SSKEVIGRN 210
++EV+G N
Sbjct: 73 RAEEVLGGN 81
>sp|B2SB67|LOVHK_BRUA1 Blue-light-activated histidine kinase OS=Brucella abortus (strain
S19) GN=BAbS19_II06090 PE=3 SV=1
Length = 489
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 155 RGAFPRVSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
RGA + ++ +AA+ ++++ PD PI++A+ F +TGY + EV+GRN
Sbjct: 13 RGALSQATDPFRAAVEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRN 68
>sp|Q8FW73|LOVHK_BRUSU Blue-light-activated histidine kinase OS=Brucella suis biovar 1
(strain 1330) GN=BRA0588 PE=3 SV=2
Length = 489
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 155 RGAFPRVSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
RGA + ++ +AA+ ++++ PD PI++A+ F +TGY + EV+GRN
Sbjct: 13 RGALSQATDPFRAAVEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRN 68
>sp|A9WYQ7|LOVHK_BRUSI Blue-light-activated histidine kinase OS=Brucella suis (strain ATCC
23445 / NCTC 10510) GN=BSUIS_B0585 PE=3 SV=2
Length = 489
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 155 RGAFPRVSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
RGA + ++ +AA+ ++++ PD PI++A+ F +TGY + EV+GRN
Sbjct: 13 RGALSQATDPFRAAVEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRN 68
>sp|Q8YC53|LOVHK_BRUME Blue-light-activated histidine kinase OS=Brucella melitensis
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
GN=BMEII0679 PE=1 SV=1
Length = 489
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 155 RGAFPRVSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
RGA + ++ +AA+ ++++ PD PI++A+ F +TGY + EV+GRN
Sbjct: 13 RGALSQATDPFRAAVEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRN 68
>sp|A9MBM8|LOVHK_BRUC2 Blue-light-activated histidine kinase OS=Brucella canis (strain
ATCC 23365 / NCTC 10854) GN=BCAN_B0589 PE=3 SV=2
Length = 489
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 155 RGAFPRVSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
RGA + ++ +AA+ ++++ PD PI++A+ F +TGY + EV+GRN
Sbjct: 13 RGALSQATDPFRAAVEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRN 68
>sp|Q577Y7|LOVHK_BRUAB Blue-light-activated histidine kinase OS=Brucella abortus biovar 1
(strain 9-941) GN=BruAb2_0636 PE=3 SV=2
Length = 489
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 155 RGAFPRVSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
RGA + ++ +AA+ ++++ PD PI++A+ F +TGY + EV+GRN
Sbjct: 13 RGALSQATDPFRAAVEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRN 68
>sp|Q2YKK7|LOVHK_BRUA2 Blue-light-activated histidine kinase OS=Brucella abortus (strain
2308) GN=BAB2_0652 PE=1 SV=2
Length = 489
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 155 RGAFPRVSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
RGA + ++ +AA+ ++++ PD PI++A+ F +TGY + EV+GRN
Sbjct: 13 RGALSQATDPFRAAVEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRN 68
>sp|A5VUS1|LOVHK_BRUO2 Blue-light-activated histidine kinase OS=Brucella ovis (strain ATCC
25840 / 63/290 / NCTC 10512) GN=BOV_A0554 PE=3 SV=2
Length = 489
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 155 RGAFPRVSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
RGA + ++ +AA+ ++++ PD PI++A+ F +TGY + EV+GRN
Sbjct: 13 RGALSQATDPFRAAVEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRN 68
>sp|Q8W420|ADO2_ARATH Adagio protein 2 OS=Arabidopsis thaliana GN=ADO2 PE=1 SV=1
Length = 611
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 28/35 (80%)
Query: 176 FVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
FVVSDA +PD PI+Y ++ F +TGY ++EVIGRN
Sbjct: 47 FVVSDALEPDNPIIYVNTVFEIVTGYRAEEVIGRN 81
>sp|Q881J7|LOVHK_PSESM Blue-light-activated protein OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=PSPTO_2896 PE=1 SV=1
Length = 534
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 167 AALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRNW 211
AA+ T + +V+D +PD PI++++ F MTGY+++E++G N
Sbjct: 26 AAVETTRMPMIVTDPNRPDNPIIFSNRAFLEMTGYTAEEILGTNC 70
>sp|Q67UX0|ADO2_ORYSJ Putative adagio-like protein 2 OS=Oryza sativa subsp. japonica
GN=Os02g0150800 PE=3 SV=1
Length = 635
Score = 47.0 bits (110), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 176 FVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
VVSDA +PD PI+Y + GF TGY ++EV+GRN
Sbjct: 56 LVVSDALEPDFPIIYVNRGFEDATGYRAEEVLGRN 90
>sp|Q48IV1|LOVHK_PSE14 Blue-light-activated protein OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=PSPPH_2483 PE=3
SV=2
Length = 534
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 138 SSERFTIDSTRTSEESERGAFPRVSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFS 197
S E+ +D+ T + +G + AA+ T + +V+D + D PI++++ F
Sbjct: 2 SEEKARVDNAATGDIQHQG-----KDIFFAAVETTRMPMIVTDPNRADNPIIFSNRAFLE 56
Query: 198 MTGYSSKEVIGRNW 211
MTGYSS+E+IG N
Sbjct: 57 MTGYSSEEIIGTNC 70
>sp|O34627|PHOT_BACSU Blue-light photoreceptor OS=Bacillus subtilis (strain 168) GN=pfyP
PE=1 SV=1
Length = 261
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 158 FPRVSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
P E +K AL ++ V++D D PI+Y + GF MTGY ++E++G+N
Sbjct: 9 IPGQLEVIKKALDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKN 61
>sp|Q9C9W9|ADO3_ARATH Adagio protein 3 OS=Arabidopsis thaliana GN=ADO3 PE=1 SV=1
Length = 619
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 175 TFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
+F+VSDA +PD P++Y + F TGY + EV+GRN
Sbjct: 55 SFIVSDALEPDFPLIYVNRVFEVFTGYRADEVLGRN 90
>sp|Q2R2W1|ADO3_ORYSJ Adagio-like protein 3 OS=Oryza sativa subsp. japonica
GN=Os11g0547000 PE=2 SV=2
Length = 630
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 176 FVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
VVSDA + D P++Y ++ F + TGY + EV+GRN
Sbjct: 67 IVVSDAVEVDFPVIYVNAAFEAATGYRADEVLGRN 101
>sp|Q2NB77|LVHK2_ERYLH Blue-light-activated histidine kinase 2 OS=Erythrobacter litoralis
(strain HTCC2594) GN=ELI_04860 PE=1 SV=1
Length = 346
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 161 VSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
++E K A L + ++D ++ D P++Y + F MTGYS V+GRN
Sbjct: 5 LAEHDKEAWGRLPFSLTIADISQDDEPLIYVNRAFEQMTGYSRSSVVGRN 54
>sp|A6X554|LOVHK_OCHA4 Blue-light-activated histidine kinase OS=Ochrobactrum anthropi
(strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=Oant_3652
PE=3 SV=1
Length = 491
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 32/55 (58%)
Query: 156 GAFPRVSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
+F + + AA+ ++++ PD PI++A+ F ++TGY + E+IG+N
Sbjct: 14 ASFSQEANPFTAAVELTPMPMLITNPRLPDNPIIFANEAFQNLTGYEADEIIGKN 68
>sp|Q9HPU8|BAT_HALSA Bacterioopsin transcriptional activator OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=bat PE=1
SV=1
Length = 674
Score = 39.3 bits (90), Expect = 0.022, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 113 DVLGEGTFKAVNLRKPSGDGDRSKNSSERFTIDS------TRTSEESERGAFPRVSEELK 166
D G AV+ + DR + S+ + D+ + + ESER R+ E+
Sbjct: 109 DADATGLVPAVSEDATAAIADRIEQSAPAHSEDTETRMPISDLTVESER----RLKEQ-- 162
Query: 167 AALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
AL +SDAT P+ PI+Y + F +TGYS EV+G N
Sbjct: 163 -ALDEAPIGITISDATDPEEPIIYINDSFEDITGYSPDEVVGAN 205
>sp|P58724|PHOT_LISMO Blue-light photoreceptor OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=lmo0799 PE=3 SV=1
Length = 253
Score = 37.4 bits (85), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 157 AFPRVSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRNW 211
A+P+ LKA L +++D + D PI++ ++GF ++TGY+ +E +G N
Sbjct: 3 AYPQFDVILKA-LNLSSVGVIITDPEQKDNPIIFVNTGFENITGYAKEEALGSNC 56
>sp|Q92DM1|PHOT_LISIN Blue-light photoreceptor OS=Listeria innocua serovar 6a (strain
CLIP 11262) GN=lin0792 PE=3 SV=1
Length = 253
Score = 37.4 bits (85), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 157 AFPRVSEELKAALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
A+P+ LKA L +++D + + PI++ ++GF ++TGY+ +E IG N
Sbjct: 3 AYPKFDVILKA-LNLSSVGVIITDPEQKNNPIIFVNTGFENITGYTKEEAIGSN 55
>sp|Q9ER47|KCNH7_MOUSE Potassium voltage-gated channel subfamily H member 7 OS=Mus
musculus GN=Kcnh7 PE=2 SV=2
Length = 1195
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 176 FVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGR 209
F++++A +C I+Y + GF MTG+S +V+ +
Sbjct: 29 FIIANARVQNCAIIYCNDGFCEMTGFSRPDVMQK 62
>sp|O54852|KCNH7_RAT Potassium voltage-gated channel subfamily H member 7 OS=Rattus
norvegicus GN=Kcnh7 PE=1 SV=1
Length = 1195
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 176 FVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGR 209
F++++A +C I+Y + GF MTG+S +V+ +
Sbjct: 29 FIIANARVQNCAIIYCNDGFCEMTGFSRPDVMQK 62
>sp|Q9NS40|KCNH7_HUMAN Potassium voltage-gated channel subfamily H member 7 OS=Homo
sapiens GN=KCNH7 PE=2 SV=2
Length = 1196
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 23/34 (67%)
Query: 176 FVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGR 209
F++++A +C I+Y + GF MTG+S +V+ +
Sbjct: 29 FIIANARVQNCAIIYCNDGFCEMTGFSRPDVMQK 62
>sp|O02671|LEPR_PIG Leptin receptor OS=Sus scrofa GN=LEPR PE=2 SV=3
Length = 1165
Score = 34.3 bits (77), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 14/90 (15%)
Query: 69 PKIKVSDESNGRFF----NEKKAVDVDRIFTGANIAERTAEWGLVVKSDVLGEGTFKAVN 124
PKI S SN F NE K V +I N+AE+ + V D + + TF +N
Sbjct: 338 PKILTSVGSNISFHCIYKNENKIVSSKKIVWWMNLAEKIPQSQYDVVGDHVSKVTFPNMN 397
Query: 125 LRKPSGDGDRSKNSSERFTIDSTRTSEESE 154
KP G +FT D+ E E
Sbjct: 398 ATKPRG----------KFTYDAVYCCNEHE 417
>sp|Q9TSZ3|KCNH2_CANFA Potassium voltage-gated channel subfamily H member 2 OS=Canis
familiaris GN=KCNH2 PE=2 SV=1
Length = 1158
Score = 33.5 bits (75), Expect = 1.0, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 174 QTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGR 209
+ F++++A +C ++Y + GF + GYS EV+ R
Sbjct: 27 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQR 62
>sp|Q8WNY2|KCNH2_RABIT Potassium voltage-gated channel subfamily H member 2 OS=Oryctolagus
cuniculus GN=KCNH2 PE=2 SV=3
Length = 1161
Score = 33.5 bits (75), Expect = 1.0, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 174 QTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGR 209
+ F++++A +C ++Y + GF + GYS EV+ R
Sbjct: 27 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQR 62
>sp|Q12809|KCNH2_HUMAN Potassium voltage-gated channel subfamily H member 2 OS=Homo
sapiens GN=KCNH2 PE=1 SV=1
Length = 1159
Score = 33.5 bits (75), Expect = 1.0, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 174 QTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGR 209
+ F++++A +C ++Y + GF + GYS EV+ R
Sbjct: 27 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQR 62
>sp|O35219|KCNH2_MOUSE Potassium voltage-gated channel subfamily H member 2 OS=Mus
musculus GN=Kcnh2 PE=2 SV=2
Length = 1162
Score = 33.5 bits (75), Expect = 1.1, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 174 QTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGR 209
+ F++++A +C ++Y + GF + GYS EV+ R
Sbjct: 27 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQR 62
>sp|O08962|KCNH2_RAT Potassium voltage-gated channel subfamily H member 2 OS=Rattus
norvegicus GN=Kcnh2 PE=1 SV=1
Length = 1163
Score = 33.5 bits (75), Expect = 1.2, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 174 QTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGR 209
+ F++++A +C ++Y + GF + GYS EV+ R
Sbjct: 27 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQR 62
>sp|P30663|NIFL_AZOVI Nitrogen fixation regulatory protein OS=Azotobacter vinelandii
GN=nifL PE=1 SV=2
Length = 519
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 171 TLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
T++ + T I+YA+ F ++TGY S+EV+G+N
Sbjct: 30 TVEHAPIAISITDLKANILYANRAFRTITGYGSEEVLGKN 69
>sp|O54853|KCNH6_RAT Potassium voltage-gated channel subfamily H member 6 OS=Rattus
norvegicus GN=Kcnh6 PE=1 SV=1
Length = 950
Score = 33.1 bits (74), Expect = 1.4, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 174 QTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGR 209
+ F++++A +C I+Y + GF + GYS EV+ R
Sbjct: 27 RKFLIANAQMENCAIIYCNDGFCELFGYSRVEVMQR 62
>sp|O18965|KCNH1_BOVIN Potassium voltage-gated channel subfamily H member 1 OS=Bos taurus
GN=KCNH1 PE=2 SV=2
Length = 987
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 176 FVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
FV+ +A D PI+Y++ GF ++GY EV+ ++
Sbjct: 30 FVLGNAQIVDWPIVYSNDGFCKLSGYHRAEVMQKS 64
>sp|Q63472|KCNH1_RAT Potassium voltage-gated channel subfamily H member 1 OS=Rattus
norvegicus GN=Kcnh1 PE=1 SV=1
Length = 962
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 176 FVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
FV+ +A D PI+Y++ GF ++GY EV+ ++
Sbjct: 30 FVLGNAQIVDWPIVYSNDGFCKLSGYHRAEVMQKS 64
>sp|O95259|KCNH1_HUMAN Potassium voltage-gated channel subfamily H member 1 OS=Homo
sapiens GN=KCNH1 PE=1 SV=1
Length = 989
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 176 FVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
FV+ +A D PI+Y++ GF ++GY EV+ ++
Sbjct: 30 FVLGNAQIVDWPIVYSNDGFCKLSGYHRAEVMQKS 64
>sp|Q60603|KCNH1_MOUSE Potassium voltage-gated channel subfamily H member 1 OS=Mus
musculus GN=Kcnh1 PE=1 SV=1
Length = 989
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 176 FVVSDATKPDCPIMYASSGFFSMTGYSSKEVIGRN 210
FV+ +A D PI+Y++ GF ++GY EV+ ++
Sbjct: 30 FVLGNAQIVDWPIVYSNDGFCKLSGYHRAEVMQKS 64
>sp|Q9MYL0|LEPR_MACMU Leptin receptor OS=Macaca mulatta GN=LEPR PE=2 SV=2
Length = 1163
Score = 32.3 bits (72), Expect = 2.6, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 14/90 (15%)
Query: 69 PKIKVSDESNGRFF----NEKKAVDVDRIFTGANIAERTAEWGLVVKSDVLGEGTFKAVN 124
PKI S SN F NE K V +I N+AE+ + V SD + + TF +N
Sbjct: 336 PKILTSVGSNVSFHCIYKNENKIVSSKKIVWWMNLAEKIPQSQYDVVSDHVSKVTFFNLN 395
Query: 125 LRKPSGDGDRSKNSSERFTIDSTRTSEESE 154
KP G +FT D+ E E
Sbjct: 396 ETKPRG----------KFTYDAVYCCNEHE 415
>sp|Q9H252|KCNH6_HUMAN Potassium voltage-gated channel subfamily H member 6 OS=Homo
sapiens GN=KCNH6 PE=1 SV=1
Length = 994
Score = 31.6 bits (70), Expect = 3.7, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 174 QTFVVSDATKPDCPIMYASSGFFSMTGYSSKEVI 207
+ F++++A +C I+Y + GF + GYS EV+
Sbjct: 27 RKFLIANAQMENCAIIYCNDGFCELFGYSRVEVM 60
>sp|Q9HC56|PCDH9_HUMAN Protocadherin-9 OS=Homo sapiens GN=PCDH9 PE=1 SV=2
Length = 1237
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 40 EDLHTQALKAFTTTSTNKWMAFEGESGSYPKIKVSDESNGRFFNEKKAVDVDRIFTGANI 99
+DL+ + A T TS + ++G P +KVS S G F +D +++ GA+
Sbjct: 45 KDLNISHINAATGTSASLVYRLVSKAGDAPLVKVS-SSTGEIFTTSNRIDREKLCAGASY 103
Query: 100 AERTAEWGLVVKSDVLGEGTFKAVNLR 126
AE E ++ +L F+ + ++
Sbjct: 104 AEEN-ECFFELEVVILPNDFFRLIKIK 129
>sp|A6TRW0|RSGA_ALKMQ Putative ribosome biogenesis GTPase RsgA OS=Alkaliphilus
metalliredigens (strain QYMF) GN=rsgA PE=3 SV=1
Length = 292
Score = 31.6 bits (70), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 144 IDSTRTSEESERGA----FPRVSEELKAALATLQQTFVVSDATKPD 185
++ T T E++++G FPR +E ++ +A + Q VV T+PD
Sbjct: 44 VEITVTDEDNKKGMIDDIFPRKTELIRPTVANVDQVIVVFSVTQPD 89
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.126 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,591,695
Number of Sequences: 539616
Number of extensions: 3125502
Number of successful extensions: 5556
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 5495
Number of HSP's gapped (non-prelim): 69
length of query: 211
length of database: 191,569,459
effective HSP length: 112
effective length of query: 99
effective length of database: 131,132,467
effective search space: 12982114233
effective search space used: 12982114233
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)