BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037091
(277 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VWJ1|HPT1_ARATH Homogentisate phytyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=VTE2-1 PE=2 SV=1
Length = 393
Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 125/215 (58%), Gaps = 7/215 (3%)
Query: 63 GHSEDLVINRNHKLLSKSTVALAAQDGYSSESELVSTSFMQVLNKKCDAFYRLTRPYSCV 122
G L++ HK + + + S S+ SF L DAFYR +RP++ +
Sbjct: 57 GQGSSLLLYPKHKSRFRVNATAGQPEAFDSNSK--QKSFRDSL----DAFYRFSRPHTVI 110
Query: 123 SIIAALLSVSLLPLQNPADFTPKLIIEAFKCMVPAIMMNNYANAINQLADVHIDKVNKPH 182
+ ++LSVS L ++ +D +P L + +V A+MMN Y +NQL+DV IDKVNKP+
Sbjct: 111 GTVLSILSVSFLAVEKVSDISPLLFTGILEAVVAALMMNIYIVGLNQLSDVEIDKVNKPY 170
Query: 183 LPLACGDFSMGEGLAITIASPLMAVAMGIMLRSPPLVIGFIIWCIVGGAYSIDLPPLLRW 242
LPLA G++S+ G+AI + +M+ +G ++ S PL + ++G AYSI+L PLLRW
Sbjct: 171 LPLASGEYSVNTGIAIVASFSIMSFWLGWIVGSWPLFWALFVSFMLGTAYSINL-PLLRW 229
Query: 243 KGNPLMAAVTIISMNGLLLLFPFFIHFQKIVLGNP 277
K L+AA+ I+++ +++ F++H Q V G P
Sbjct: 230 KRFALVAAMCILAVRAIIVQIAFYLHIQTHVFGRP 264
>sp|B7FA90|HPT1_ORYSJ Probable homogentisate phytyltransferase 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT1 PE=2 SV=1
Length = 404
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 123/210 (58%), Gaps = 4/210 (1%)
Query: 71 NRNHKLLSKSTVALAAQDGY---SSESELVSTSFMQVLNKKCDAFYRLTRPYSCVSIIAA 127
+ +H++ + T + A G SS S+S + ++ DAFYR +RP++ + +
Sbjct: 67 SSHHRIPHRPTSSSADASGQPLQSSAEAHDSSSIWKPISSSLDAFYRFSRPHTVIGTALS 126
Query: 128 LLSVSLLPLQNPADFTPKLIIEAFKCMVPAIMMNNYANAINQLADVHIDKVNKPHLPLAC 187
++SVSLL ++N +D +P + + +V A+ MN Y +NQL D+ IDKVNKP LPLA
Sbjct: 127 IVSVSLLAVENLSDVSPLFLTGLLEAVVAALFMNIYIVGLNQLFDIEIDKVNKPTLPLAS 186
Query: 188 GDFSMGEGLAITIASPLMAVAMGIMLRSPPLVIGFIIWCIVGGAYSIDLPPLLRWKGNPL 247
G++S G+A+ A M+ +G + S PL + I I+G AYSI+L P LRWK + +
Sbjct: 187 GEYSPATGVALVSAFAAMSFGLGWAVGSQPLFLALFISFILGTAYSINL-PFLRWKRSAV 245
Query: 248 MAAVTIISMNGLLLLFPFFIHFQKIVLGNP 277
+AA+ I+++ +++ FF+H Q V P
Sbjct: 246 VAALCILAVRAVIVQLAFFLHIQTFVFRRP 275
>sp|B9A1Q4|G4DT_SOYBN Glycinol 4-dimethylallyltransferase OS=Glycine max GN=G4DT PE=1
SV=1
Length = 409
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 92/167 (55%), Gaps = 1/167 (0%)
Query: 111 AFYRLTRPYSCVSIIAALLSVSLLPLQNPADFTPKLIIEAFKCMVPAIMMNNYANAINQL 170
AFY + PY+ + I S SLL ++ +D + +I + ++P + + Y +NQL
Sbjct: 115 AFYWFSYPYTMIGITLCAFSSSLLAVEKLSDISLSFLIGVLQGVLPQLFIEIYLCGVNQL 174
Query: 171 ADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVAMGIMLRSPPLVIGFIIWCIVGG 230
D+ IDK+NKPHLP+A G FS G+ I+ A ++ + S PL+ ++
Sbjct: 175 YDLEIDKINKPHLPMASGQFSFKTGVIISAAFLALSFGFTWITGSWPLICNLVVIASSWT 234
Query: 231 AYSIDLPPLLRWKGNPLMAAVTIISMNGLLLLFPFFIHFQKIVLGNP 277
AYSID+ PLLRWK P +AA+ +IS L L +F H Q +VL P
Sbjct: 235 AYSIDV-PLLRWKRYPFVAAMCMISTWALALPISYFHHMQTVVLKRP 280
>sp|B1B3P3|N8DT1_SOPFL Naringenin 8-dimethylallyltransferase 1, chloroplastic OS=Sophora
flavescens GN=N8DT-1 PE=1 SV=1
Length = 410
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Query: 100 SFMQVLNKKCDAFYRLTRPYSCVSIIAALLSVSLLPLQNPADFTPKLIIEAFKCMVPAIM 159
S +N D FY+ RPY+ +I+ SL+ ++ +D + I + +V I
Sbjct: 105 SIWDSVNDALDIFYKFCRPYAMFTIVLGATFKSLVAVEKLSDLSLAFFIGWLQVVVAVIC 164
Query: 160 MNNYANAINQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVAMGIMLRSPPLV 219
++ + +NQL D+ IDK+NKP LPLA G S + IT +S ++ + ++ S PL
Sbjct: 165 IHIFGVGLNQLCDIEIDKINKPDLPLASGKLSFRNVVIITASSLILGLGFAWIVDSWPLF 224
Query: 220 IGFIIWCIVGGAYSIDLPPLLRWKGNPLMAAVTIISMNGLLLLFPFFIHFQKIVLGNP 277
I C+V AY++DL PLLRWK P++ A+ I+ + FF+H Q V P
Sbjct: 225 WTVFISCMVASAYNVDL-PLLRWKKYPVLTAINFIADVAVTRSLGFFLHMQTCVFKRP 281
>sp|Q0D576|HPT2_ORYSJ Probable homogentisate phytyltransferase 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=HPT2 PE=3 SV=2
Length = 379
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Query: 79 KSTVALAAQDGYSSESELVSTSFMQVLNKKCDAFYRLTRPYSCVSIIAALLSVSLLP--- 135
+ V + +Q G + + L T L+ D+ +R RP++ AL S++L+
Sbjct: 59 RDAVRVCSQAGAAGPAPLSKT-----LSDLKDSCWRFLRPHTIRG--TALGSIALVARAL 111
Query: 136 LQNPADFTPKLIIEAFKCMVPAIMMNNYANAINQLADVHIDKVNKPHLPLACGDFSMGEG 195
++NP L+ +AF +V I N Y INQ+ D+ IDKVNKP+LP+A GD S+
Sbjct: 112 IENPQLINWWLVFKAFYGLVALICGNGYIVGINQIYDIRIDKVNKPYLPIAAGDLSVQTA 171
Query: 196 LAITIASPLMAVAMGIMLRSPPLVIGFIIWCIVGGAYSIDLPPLLRWKGNPLMAAVTIIS 255
+ + ++ + P + + + +G YS+ PP R K P+ A + I +
Sbjct: 172 WLLVVLFAAAGFSIVVTNFGPFITSLYCLGLFLGTIYSV--PP-FRLKRYPVAAFLIIAT 228
Query: 256 MNGLLLLF 263
+ G LL F
Sbjct: 229 VRGFLLNF 236
>sp|Q1ACB3|HPT2_ARATH Homogentisate phytyltransferase 2, chloroplastic OS=Arabidopsis
thaliana GN=HPT2 PE=2 SV=1
Length = 386
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 39/252 (15%)
Query: 37 LANKSESKKYSVRCSSESSFFLTNKIGHSEDLVINRNHKLLSKSTVALAAQDGYSSESEL 96
LA K S VR +S S+ + +K ++ N++ K ++ +Q G + +
Sbjct: 33 LAGKFISLPRDVRFTSLSTSRMRSKF-------VSTNYR---KISIRACSQVGAAESDDP 82
Query: 97 VSTSFMQVLNKKCDAFYRLTRPYSCVSIIAALLSVSLLP---LQNPADFTPKLIIEAFKC 153
V + + + +A +R RP++ AL S +L+ ++N L+++A
Sbjct: 83 V----LDRIARFQNACWRFLRPHTIRG--TALGSTALVTRALIENTHLIKWSLVLKALSG 136
Query: 154 MVPAIMMNNYANAINQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVAMGIML 213
++ I N Y INQ+ D+ IDKVNKP+LP+A GD S+ + I A+A G+
Sbjct: 137 LLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVI---FFAIA-GL-- 190
Query: 214 RSPPLVIGFIIWCIVGGAYSIDL--------PPLLRWKGNPLMAAVTIISMNGLLLLFPF 265
LV+GF + YS+ L PP LR K P+ A + I ++ G LL F
Sbjct: 191 ----LVVGFNFGPFITSLYSLGLFLGTIYSVPP-LRMKRFPVAAFLIIATVRGFLLNFGV 245
Query: 266 FIHFQKIVLGNP 277
+ H + LG P
Sbjct: 246 Y-HATRAALGLP 256
>sp|B1L6Z7|DGGGP_KORCO Digeranylgeranylglyceryl phosphate synthase OS=Korarchaeum
cryptofilum (strain OPF8) GN=Kcr_1480 PE=3 SV=1
Length = 281
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 17/136 (12%)
Query: 108 KCDAFYRLTRPYSCV-SIIAALLSVSLLPLQNPADFTPKLIIEAFKCMVPAIMMNNYANA 166
K A+ ++RP + + SI+ L + + + + +LI+ C++P +++ NA
Sbjct: 3 KLGAYVEISRPKNALMSILGTLTG----WVNSTSVYDGRLILA---CLIPPLVLMA-GNA 54
Query: 167 INQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVAMGIMLRSPPLVIGFIIWC 226
IN D ID +NKP+ P+ G S E L I IA L +A+ I L GFI +
Sbjct: 55 INDYYDAEIDAINKPYRPIPSGRISKREALNIYIALSLFGIALSIFL-------GFIEFL 107
Query: 227 IVGGAYSIDLPPLLRW 242
IV A+S+ RW
Sbjct: 108 IV-TAFSLSWYAYARW 122
>sp|Q9UWY6|DGGGP_SULSO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=ubiA-2 PE=1 SV=1
Length = 282
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 167 INQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVAMGIMLRSPPLVIGFIIWC 226
IN + DV IDK+NKP+ P+ G S+ + A++IA ++ +A+ I+L LVI +
Sbjct: 56 INDVYDVEIDKINKPYRPIPSGKISVNKAKALSIALFIIGIALSILLNIYALVIALV--T 113
Query: 227 IVGGAYSIDLPPLLRWKGNPLMAAVTIISM 256
+G Y + GN L+A T +S+
Sbjct: 114 AIGLIYYAKDLKKTGFYGNLLVATTTALSI 143
>sp|A3CW74|DGGGP_METMJ Digeranylgeranylglyceryl phosphate synthase OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
GN=Memar_1697 PE=3 SV=1
Length = 279
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 111 AFYRLTRPYSCVSIIAALLSVSLLPLQNPADFTPKLIIEAFKCMVPAIMMNNYANAINQL 170
AF R+TRP++ +++A L ++ + P L++ ++ A N IN +
Sbjct: 5 AFIRITRPHN--AVVAGLTALIGYLIATGTLTPPSLLLAVIVALITA-----GGNVINDV 57
Query: 171 ADVHIDKVNKPHLPLACGDFSM 192
DV ID++N+P P+ GD S+
Sbjct: 58 RDVEIDRINRPDRPIPAGDISL 79
>sp|B6YW76|DGGGP_THEON Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
onnurineus (strain NA1) GN=TON_1950 PE=3 SV=1
Length = 276
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 13/148 (8%)
Query: 108 KCDAFYRLTRPYSCV-SIIAALLSVSLLPLQNPADFTPKLIIEAFKCMVPAIMMNNYANA 166
+ AF +TRP++C+ + I LL S++ L + D PK + F + N
Sbjct: 2 ELKAFIEITRPHNCILAGIVGLLG-SIVALGHFPD--PKTALLIFLVVTVGCAGGN---T 55
Query: 167 INQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAV--AMGIMLRSPPLVIGFII 224
IN D IDK+N+P PL G +MG +A+ + L AV A+ M+ ++G I
Sbjct: 56 INDYFDYEIDKINRPERPLPRG--AMGRKVALYYSMLLFAVGLALAYMINIYAFILGVIA 113
Query: 225 WCIVGGAYSIDLPPLLRWKGNPLMAAVT 252
+ + Y+ L P L + GN ++A +T
Sbjct: 114 YVTM-FIYAWKLKP-LPFVGNIVVAGLT 139
>sp|P26170|BCHG_RHOCB Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter capsulatus
(strain ATCC BAA-309 / NBRC 16581 / SB1003) GN=bchG PE=4
SV=1
Length = 304
Score = 38.5 bits (88), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 164 ANAINQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVAMGIMLRS 215
+ A N D H+D +N+PH P+ G GL I IA L+++ +G L S
Sbjct: 68 SQAANDWCDRHVDAINEPHRPIPSGRIPGLWGLYIAIAMSLLSLVVGWQLGS 119
>sp|Q46BD9|DGGGP_METBF Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=Mbar_A1863 PE=3
SV=1
Length = 289
Score = 38.5 bits (88), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 123 SIIAALLSVSLLPLQNPADFTPKL--IIEAFKCMVPAIMMNNYANAINQLADVHIDKVNK 180
+II L++ ++L P+ ++P + + + ++ NAIN DV ID +N+
Sbjct: 24 AIIGTLIAFNILTSNAPSSYSPGEFPLFSSVLIFLAVFLVAGAGNAINDYFDVRIDSINR 83
Query: 181 PHLPLACGDFSMGEGL 196
P P+ G + E L
Sbjct: 84 PDRPIPSGRMKLKEAL 99
>sp|Q57727|DGGGP_METJA Digeranylgeranylglyceryl phosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0279 PE=3 SV=1
Length = 283
Score = 38.1 bits (87), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 163 YANAINQLADVHIDKVNKPHLPLACGDFSMGE 194
Y N IN + D+ ID++NKP PL G + E
Sbjct: 57 YGNVINDIFDIEIDRINKPSRPLPSGKIKLNE 88
>sp|A9A8Y7|DGGGP_METM6 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_0995
PE=3 SV=1
Length = 278
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 155 VPAIMMNNYANAINQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVAMGIML 213
+ ++ + NA+N + D+ IDK+NKP P+ S+GE I S L+ V MG+++
Sbjct: 45 IVVFLVCGFGNALNDIYDLKIDKINKPKRPIPSKRISLGEA---RIFSYLL-VVMGLII 99
>sp|Q971A3|DGGGP_SULTO Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=STK_14510 PE=3 SV=1
Length = 278
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 167 INQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVAMGIMLRSPPLVIGFI 223
IN + D+ IDK+NKP+ PL G + +++I L+ + + ++L +I +
Sbjct: 56 INDVFDIEIDKINKPNRPLPSGRIKISRARSLSIVLFLVGIVLSVLLNIYAFIIALL 112
>sp|A6UVU6|DGGGP_META3 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_1040
PE=3 SV=1
Length = 279
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 17/109 (15%)
Query: 105 LNKKCDAFYRLTRPYSCVS-----IIAALLSVSLLPLQNPADFTPKLIIEAFKCMVPAIM 159
+N K + L R +C++ II L++ ++F LI + +
Sbjct: 1 MNLKIKYYLELIRVKNCLTASFGTIIGGLIA---------SNFNFGLIGYILLASLIVFL 51
Query: 160 MNNYANAINQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVA 208
+ + NA+N + D+ IDK+NKP+ PL S+ TI S L+ ++
Sbjct: 52 VCGFGNALNDIQDIEIDKINKPNRPLPSNKISLKSA---TIFSYLLMIS 97
>sp|A4YI21|DGGGP_METS5 Digeranylgeranylglyceryl phosphate synthase OS=Metallosphaera
sedula (strain ATCC 51363 / DSM 5348) GN=Msed_1933 PE=3
SV=1
Length = 284
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 159 MMNNYANAINQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVAM 209
+++ NAIN + DV ID++NKP P+ G S+ A +++ LM V +
Sbjct: 46 LVDAGGNAINDVYDVEIDRINKPDRPIPSGAVSLRT--ATSLSYGLMGVGV 94
>sp|Q5JDN5|DGGGP_PYRKO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=TK1957 PE=3 SV=1
Length = 277
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 15/96 (15%)
Query: 111 AFYRLTRPYSC-----VSIIAALLSVSLLPLQNPADFTPKLIIEAFKCMVPAIMMNNYAN 165
AF +TRP++C V ++ ++++ LP A ++ C N
Sbjct: 5 AFIEITRPHNCLLAGIVGVLGSIVAAGGLPELKTAILV--FLVVFLGC--------AGGN 54
Query: 166 AINQLADVHIDKVNKPHLPLACGDFSMGEGLAITIA 201
IN D IDK+N+P PL G S L ++A
Sbjct: 55 TINDYFDYEIDKINRPERPLPRGAMSRKAALWYSVA 90
>sp|Q9V2P5|DGGGP_PYRAB Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB00300 PE=3 SV=2
Length = 277
Score = 34.7 bits (78), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 26/146 (17%)
Query: 108 KCDAFYRLTRPYSC-----VSIIAALLSVSLLPLQNPADFTPKLIIEAFKCMVPAIMMN- 161
+ AF + RP++C V I+ +L++ +P IE + + +
Sbjct: 2 EVKAFIEIMRPHNCILAGVVGILGSLVAYEGIPS-----------IEKLGLVFLVVYLGC 50
Query: 162 NYANAINQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVAMGIMLRSPPLVIG 221
+ N IN DV ID+VN+P+ P+ G L + ++ +A+ L L+
Sbjct: 51 SAGNTINDYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFA 110
Query: 222 FIIWCIVGGAYSIDLPPLLRWKGNPL 247
GAY++ + WK PL
Sbjct: 111 L-------GAYALTF--IYAWKLKPL 127
>sp|Q9Z5D6|BCHG_RHOS4 Bacteriochlorophyll synthase 33 kDa chain OS=Rhodobacter
sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM
158) GN=bchG PE=4 SV=1
Length = 302
Score = 34.7 bits (78), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 159 MMNNYANAINQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVAMGIML 213
++ + A N D H+D VN+P P+ G GL I + ++++A+G ML
Sbjct: 62 LVCGMSQAANNWCDRHVDAVNEPDRPIPSGRIPGRWGLYIALLMTVLSLAVGWML 116
>sp|O57753|DGGGP_PYRHO Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=PH0027 PE=3 SV=1
Length = 277
Score = 34.7 bits (78), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 23/87 (26%)
Query: 111 AFYRLTRPYSC-----VSIIAALLSVSLLPLQNPADFTPKLI----IEAFKCMVPAIMMN 161
AF + RP++C V I+ +L++ +P P KLI + F C
Sbjct: 5 AFVEIMRPHNCILAGIVGILGSLVAYEGIP---PVQ---KLILIFLVVYFGC-------- 50
Query: 162 NYANAINQLADVHIDKVNKPHLPLACG 188
+ N IN DV IDK+N+P+ P+ G
Sbjct: 51 SAGNTINDYFDVEIDKINRPNRPIPRG 77
>sp|Q12VF3|DGGGP_METBU Digeranylgeranylglyceryl phosphate synthase OS=Methanococcoides
burtonii (strain DSM 6242) GN=Mbur_1679 PE=3 SV=1
Length = 281
Score = 34.3 bits (77), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 159 MMNNYANAINQLADVHIDKVNKPHLPLACGDFSMGEGL 196
++ N +N D+ IDKVNKP P+ G S+ L
Sbjct: 54 LVTGAGNGLNDYFDIEIDKVNKPSRPIPSGKISLKSAL 91
>sp|Q2FN44|DGGGP_METHJ Digeranylgeranylglyceryl phosphate synthase OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=Mhun_0625 PE=3 SV=1
Length = 280
Score = 34.3 bits (77), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 23/115 (20%)
Query: 111 AFYRLTRPY-SCVSIIAALLSVSLLPLQNPADFTPKLIIEAFKCMVPAIMMNNYANAINQ 169
A+ + RP + V+ +A +L+ + PA+F F + + N IN
Sbjct: 5 AYLSIIRPVNAVVAGLAGILASIIATGSIPAEF--------FWIFCIVLTITGAGNVIND 56
Query: 170 LADVHIDKVNKPHLPLACGD-------------FSMGEGLAITIAS-PLMAVAMG 210
D ID +N+P P+ G F +G G+AI PL +AMG
Sbjct: 57 YYDKEIDAINQPDRPIPSGQIIPGHALMYAILLFLIGNGIAILFTPLPLAGIAMG 111
>sp|C6A2C9|DGGGP_THESM Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0711 PE=3
SV=1
Length = 279
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 19/90 (21%)
Query: 108 KCDAFYRLTRPYSC-----VSIIAALLSVSLLPLQNPADFTPKLIIEAF-KCMVPAIMMN 161
KC F + RP +C V I+ A +++ LP P + + + F +C
Sbjct: 4 KC--FIEILRPINCLIAGLVGILGATVALGHLP---PIKTSLLIFLVVFLEC-------- 50
Query: 162 NYANAINQLADVHIDKVNKPHLPLACGDFS 191
++ N IN D IDK+N+P+ PL G S
Sbjct: 51 SWGNIINDYFDYEIDKINRPNRPLPRGALS 80
>sp|A0B8A0|DGGGP_METTP Digeranylgeranylglyceryl phosphate synthase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=Mthe_1142 PE=3
SV=1
Length = 267
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 114 RLTRPYSCVSIIAALLS---VSLLPLQNPADFTPKLIIEAFKCMVPAIMMNNYANAINQL 170
+ RP +CV AA L+ VS LQ+ TP L+ A +++ NAIN
Sbjct: 5 EIMRPANCVMAGAASLTGMLVSGALLQSL--HTPVLVFSA------VLLITGGGNAINDY 56
Query: 171 ADVHIDKVNKPHLPLACGDFS 191
D ID VN+P P+ G S
Sbjct: 57 FDREIDAVNRPDRPIPSGRIS 77
>sp|Q8TZM7|DGGGP_PYRFU Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1963 PE=3 SV=1
Length = 277
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 15/89 (16%)
Query: 108 KCDAFYRLTRPYSC-----VSIIAALLSVSLLPLQNPADFTPKLIIEAFKCMVPAIMMNN 162
+ F + RP++C V I+ AL++ +P + T + F C +
Sbjct: 2 EVKGFIEIMRPHNCILAGIVGILGALVAYEGIP--DIKTLTLIFWVVYFGC--------S 51
Query: 163 YANAINQLADVHIDKVNKPHLPLACGDFS 191
N N D IDK+N+P+ PL G S
Sbjct: 52 GGNTANDYFDYEIDKINRPNRPLPRGAMS 80
>sp|A6VHU1|DGGGP_METM7 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0950
PE=3 SV=1
Length = 278
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 28/123 (22%)
Query: 111 AFYRLTRPYSCVS-----IIAALLSVSLLPLQNPADFTPKLIIEAFKCMVPAIMMNNYAN 165
A++ L R +C++ I L++ S L D I+ C + N
Sbjct: 5 AYFELIRLKNCLTASFGAFIGGLIA-SYFNLATVYDLILASIVVFLVC--------GFGN 55
Query: 166 AINQLADVHIDKVNKPHLPLACGDFSMGE-----------GLAITI---ASPLMAVAMGI 211
A+N + D+ IDK+NKP P+ S+ + GL I++ A LMAV I
Sbjct: 56 ALNDIYDLKIDKINKPERPIPSKRLSLTDARVFSYLLVFVGLFISLFNMACFLMAVLNSI 115
Query: 212 MLR 214
+L+
Sbjct: 116 VLQ 118
>sp|A1S2M4|UBIA_SHEAM 4-hydroxybenzoate octaprenyltransferase OS=Shewanella amazonensis
(strain ATCC BAA-1098 / SB2B) GN=ubiA PE=3 SV=1
Length = 290
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Query: 102 MQVLNKKCDAFYRLTRPYSCVSIIAALLSVSLLPLQNPADFTPKL-IIEAFKCMVPAIMM 160
M + +K DA+YRL R + + LL L+ L AD P L ++ F ++ ++M
Sbjct: 1 MSKMAQKWDAYYRLMRLDRPIGTM-LLLWPCLMALLLAADGMPDLRVLIIF--IIGVVVM 57
Query: 161 NNYANAINQLADVHIDK--VNKPHLPLACGDFSMGEGLAITIASPLMA 206
IN AD +D PLA G+ ++ E L + + L A
Sbjct: 58 RACGCIINDYADRKLDSHVARTRSRPLASGEVTVAEALTLFVVLGLFA 105
>sp|C5A1J7|DGGGP_THEGJ Digeranylgeranylglyceryl phosphate synthase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=TGAM_1764 PE=3 SV=1
Length = 276
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 28/117 (23%)
Query: 111 AFYRLTRPYSC-----VSIIAALLSVSLLPLQNPADFTPKLIIEAFKCMVPAIMMNNYAN 165
AF +TRP++C V ++ +++++ +P K++I F +V ++ N
Sbjct: 5 AFVEITRPHNCALAGLVGVLGSMVALGSVP-------EGKILILVF--LVVSLGCAG-GN 54
Query: 166 AINQLADVHIDKVNKPHLPLACGD-------------FSMGEGLAITIASPLMAVAM 209
IN D ID++N+P PL G F++G LA+ I+ A A+
Sbjct: 55 TINDYFDYEIDRINRPERPLPRGAMDRRTALWYSLFLFAVGLALALLISLKAFAFAL 111
>sp|A2SRL0|DGGGP_METLZ Digeranylgeranylglyceryl phosphate synthase OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
GN=Mlab_0795 PE=3 SV=1
Length = 282
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 164 ANAINQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVAM-GIMLRSPPLVIGF 222
N +N D+ IDKVN+P P+ G SP AV GI+ + F
Sbjct: 51 GNVLNDYFDLEIDKVNRPDRPIPSGK-----------VSPKGAVVWAGILFAAGVAAACF 99
Query: 223 I-IWCIVGGAYSIDLPPLL--RWKGNPLMAAVTIISMNGLLLLFPFFI 267
IWC+ ++ L + ++KG P + +++ ++G + LF F+
Sbjct: 100 TNIWCLAIALVNVVLLIIYAAKFKGIPFLGNLSVAYLSGSIFLFGGFL 147
>sp|Q8TS44|DGGGP_METAC Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=MA_0961 PE=3 SV=1
Length = 289
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 112 FYRLTRPYSCV-----SIIAALLSVSLL---PLQNPADFT-PKLIIEAFKCMVPAIMMNN 162
+ L R +C+ ++I L++ ++L PL + +FT P ++A + +++
Sbjct: 8 YLELMRYGNCLMAGFAAVIGTLIAFNILTSGPLSS--NFTGPFPFLDAGFVFLVVFLVSG 65
Query: 163 YANAINQLADVHIDKVNKPHLPLACGDFSMGEGL 196
NAIN D+ ID +N+P P+ G E L
Sbjct: 66 AGNAINDYFDIKIDSINRPERPIPSGRVQAKEAL 99
>sp|Q3INH7|DGGGP_NATPD Digeranylgeranylglyceryl phosphate synthase OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=NP_4470A
PE=3 SV=1
Length = 277
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 153 CMVPAIMMNNYANAINQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVAMGIM 212
+V ++ NAIN D ID +N+P P+ G S L ++A L AVA+ +
Sbjct: 42 AVVATVLATGAGNAINDYFDRDIDAINEPDRPIPRGAVSPRGALVYSVA--LFAVAVVLT 99
Query: 213 LRSPPLVI 220
L P L I
Sbjct: 100 LLLPWLAI 107
>sp|A4G0P3|DGGGP_METM5 Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_1730
PE=3 SV=1
Length = 278
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 155 VPAIMMNNYANAINQLADVHIDKVNKPHLPL 185
+ ++ + NA+N + D+ ID++NKP P+
Sbjct: 45 IVVFLVCGFGNALNDIYDLKIDRINKPERPI 75
>sp|A8GZR0|UBIA_SHEPA 4-hydroxybenzoate octaprenyltransferase OS=Shewanella pealeana
(strain ATCC 700345 / ANG-SQ1) GN=ubiA PE=3 SV=1
Length = 288
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 17/159 (10%)
Query: 105 LNKKCDAFYRLTRPYSCVSIIAALLSVSLLPLQNPADFTPKL------IIEAFKCMVPAI 158
L K D + RL R + + LL L+ L A P L +I F
Sbjct: 3 LRDKLDVYMRLARMDRPIGTLL-LLWPCLMALTFAAGGLPDLKVFIIFVIGVFSMRACGC 61
Query: 159 MMNNYANAINQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVAMGIMLRSPPL 218
++N+YA+ + D H+++ PLA G+ S E L + + L + + +ML PL
Sbjct: 62 IINDYAD---RKLDAHVERTKGR--PLASGEVSSKEALLLFVVMALFSFGLVLMLN--PL 114
Query: 219 VIGFIIWCIVGGAYSIDLPPLLRWKGNPLMAAVTIISMN 257
V+ ++G +I P R+ P M T+ S +
Sbjct: 115 VVQL---SVIGIILTIIYPFTKRYTNMPQMFLGTVWSWS 150
>sp|Q8TWS9|DGGGP_METKA Digeranylgeranylglyceryl phosphate synthase OS=Methanopyrus
kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC
100938) GN=MK0953 PE=3 SV=1
Length = 271
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 13/57 (22%)
Query: 165 NAINQLADVHIDKVNKPHLPL-------------ACGDFSMGEGLAITIASPLMAVA 208
NAIN D +D VN+P P+ A G F++G G+A I +A+A
Sbjct: 50 NAINDYFDAEVDAVNRPDRPIPSGRVSPRSARMFALGCFAVGVGMATVINRMCLAIA 106
>sp|Q2NGM1|DGGGP_METST Digeranylgeranylglyceryl phosphate synthase OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=Msp_0634 PE=3 SV=1
Length = 272
Score = 32.0 bits (71), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 164 ANAINQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVAMGIML 213
N IN D ID++N P+ P+ G + L ++ L+++ +G ++
Sbjct: 48 GNTINDYYDYEIDRINAPNRPIPSGKIELKRALYYSLILFLVSIILGFII 97
>sp|Q8PV96|DGGGP_METMA Digeranylgeranylglyceryl phosphate synthase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_2075 PE=3 SV=2
Length = 289
Score = 32.0 bits (71), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 15/109 (13%)
Query: 159 MMNNYANAINQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVAMGIMLRSPPL 218
+++ NAIN D+ ID +N+P P+ G E A +L +
Sbjct: 62 LVSGAGNAINDYFDIKIDSINRPERPIPSGRVKAKE-----------AFYFSYLLFALGT 110
Query: 219 VIGFIIWCIVGGAYSIDLPPLLRW----KGNPLMAAVTIISMNGLLLLF 263
+I F I I G + L+ + KG PL+ ++I + G + LF
Sbjct: 111 LIAFSINSICGSIALFNSLLLILYAKTLKGTPLLGNLSIGYLTGSVFLF 159
>sp|Q4J8K2|DGGGP_SULAC Digeranylgeranylglyceryl phosphate synthase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=Saci_1565 PE=3 SV=1
Length = 275
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Query: 166 AINQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAV--AMGIMLRSP 216
IN + D+ +DK+NKP PL G +A+ IA V A+G+++ P
Sbjct: 54 VINDVYDIEVDKINKPERPLPSGR------IAVNIARRFSIVLFAVGLIISIP 100
>sp|Q6LWN2|DGGGP_METMP Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
maripaludis (strain S2 / LL) GN=MMP1677 PE=3 SV=1
Length = 278
Score = 32.0 bits (71), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 155 VPAIMMNNYANAINQLADVHIDKVNKPHLPL 185
+ ++ + NA+N + D+ ID++NKP P+
Sbjct: 45 IVVFLVCGFGNALNDIYDLKIDRINKPKRPI 75
>sp|Q9ZSR7|TPT_ARATH Triose phosphate/phosphate translocator TPT, chloroplastic
OS=Arabidopsis thaliana GN=TPT PE=2 SV=1
Length = 410
Score = 31.6 bits (70), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Query: 102 MQVLNKKCDAF----YRLTRPYSCVSIIAALLSVSL-LPLQNPADFTP-KLIIEAFKCMV 155
+LNKK + Y ++ + V ++ L+S S+ LP + P D K++I C
Sbjct: 122 FNILNKKIYNYFPYPYFVSVIHLFVGVVYCLISWSVGLPKRAPIDSNLLKVLIPVAVCHA 181
Query: 156 PAIMMNNYANAINQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVAMGIMLRS 215
+ +N + A ++ H K +P A F MG+ + IT+ L V +G+ + S
Sbjct: 182 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFIMGQSIPITLWLSLAPVVLGVAMAS 241
>sp|A6UQV8|DGGGP_METVS Digeranylgeranylglyceryl phosphate synthase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224)
GN=Mevan_0977 PE=3 SV=1
Length = 278
Score = 31.2 bits (69), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 111 AFYRLTRPYSCVSI-IAALLSVSLLPLQNPADFTPKLIIEAFKCMVPAIMMNNYANAINQ 169
A++ L R +C++ AL+S + ++FT + + + + N++N
Sbjct: 5 AYFELIRLKNCLTAGFGALISGLI-----ASNFTFGALFPLILAFLVVFFICGFGNSLND 59
Query: 170 LADVHIDKVNKPHLPL 185
+ D+ ID++NKP P+
Sbjct: 60 IYDLKIDRINKPFRPI 75
>sp|A5ULR8|DGGGP_METS3 Digeranylgeranylglyceryl phosphate synthase OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=Msm_0941
PE=3 SV=1
Length = 283
Score = 31.2 bits (69), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 22/110 (20%)
Query: 164 ANAINQLADVHIDKVNKPHLPLACGDFSMGEGLAITIASPLMAVAMGIMLRSPPLVIGFI 223
N IN D ID +NKP P+ G S+ A +L ++GF+
Sbjct: 48 GNVINDYFDYKIDLINKPQRPIPSGRISLDN-----------AKNYAYLLFILAAIVGFL 96
Query: 224 IWCIVGG-------AYSIDLPPLL---RWKGNPLMAAVTIISMNGLLLLF 263
I C+V +S D+ L + K PL+ +T+ M GL +F
Sbjct: 97 ISCLVDTWIPCTIVIFS-DIILYLYAYKLKSTPLIGNLTVGFMTGLCFIF 145
>sp|Q96Q15|SMG1_HUMAN Serine/threonine-protein kinase SMG1 OS=Homo sapiens GN=SMG1 PE=1
SV=3
Length = 3661
Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 143 TPKLIIEAFKCMV------PAIMMNNYANAINQLADVHIDKVNKPHL 183
TP+L+ + KC++ P I N+ + ++ L HID KP L
Sbjct: 289 TPELLCKCVKCILLVARCYPHIFSTNFRDTVDILVGWHIDHTQKPSL 335
>sp|Q8BKX6|SMG1_MOUSE Serine/threonine-protein kinase SMG1 OS=Mus musculus GN=Smg1 PE=1
SV=3
Length = 3658
Score = 31.2 bits (69), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 143 TPKLIIEAFKCMV------PAIMMNNYANAINQLADVHIDKVNKPHL 183
TP+L+ + KC++ P I N+ + ++ L HID KP L
Sbjct: 287 TPELLCKCVKCILLVARCYPHIFSTNFRDTVDILVGWHIDHTQKPSL 333
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,468,622
Number of Sequences: 539616
Number of extensions: 3562296
Number of successful extensions: 10733
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 10694
Number of HSP's gapped (non-prelim): 63
length of query: 277
length of database: 191,569,459
effective HSP length: 116
effective length of query: 161
effective length of database: 128,974,003
effective search space: 20764814483
effective search space used: 20764814483
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 60 (27.7 bits)