Query 037091
Match_columns 277
No_of_seqs 132 out of 1257
Neff 5.7
Searched_HMMs 13730
Date Mon Mar 25 14:21:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037091.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037091hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2axtj1 f.23.32.1 (J:7-40) Pho 10.5 1.2E+02 0.0084 17.4 2.9 10 252-261 6-15 (34)
2 d1mvja_ g.3.6.1 (A:) Conotoxin 8.7 67 0.0049 17.0 1.2 16 39-54 4-19 (26)
3 d1iwga7 f.35.1.1 (A:7-37,A:331 6.8 3.1E+02 0.023 20.5 5.3 9 162-170 109-117 (199)
4 d1j75a_ a.4.5.19 (A:) Dlm-1 {M 5.0 26 0.0019 22.6 -2.2 23 16-38 8-37 (57)
5 d2dmda3 g.37.1.1 (A:62-90) Zin 4.2 1.2E+02 0.009 16.5 0.6 13 47-60 3-15 (29)
6 d2ahma1 a.8.9.1 (A:6-78) Nonst 3.8 5.5E+02 0.04 16.7 4.2 29 144-172 45-73 (73)
7 d2yvxa3 f.57.1.1 (A:276-448) M 3.4 3.5E+02 0.026 20.3 3.1 34 241-274 139-172 (173)
8 d2e74g1 f.23.26.1 (G:9-35) Pet 3.4 3.8E+02 0.027 14.1 3.2 7 265-271 14-20 (27)
9 d1f7da_ b.85.4.1 (A:) Deoxyuri 3.3 87 0.0063 22.3 -0.8 22 3-25 50-71 (118)
10 d1vyia_ d.293.1.1 (A:) Phospho 3.1 1.9E+02 0.014 20.3 1.0 29 30-60 13-41 (111)
No 1
>d2axtj1 f.23.32.1 (J:7-40) Photosystem II reaction center protein J, PsbJ {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=10.49 E-value=1.2e+02 Score=17.36 Aligned_cols=10 Identities=10% Similarity=0.378 Sum_probs=5.5
Q ss_pred HHHHHHHHHH
Q 037091 252 TIISMNGLLL 261 (277)
Q Consensus 252 ~i~~~~g~lv 261 (277)
.|+++.|+.|
T Consensus 6 lv~tv~G~~v 15 (34)
T d2axtj1 6 IVATVAGMGV 15 (34)
T ss_dssp HHHHHHHHHH
T ss_pred Eeeehhhhhh
Confidence 5566666444
No 2
>d1mvja_ g.3.6.1 (A:) Conotoxin {Conus striatus, S VIb [TaxId: 6493]}
Probab=8.65 E-value=67 Score=17.02 Aligned_cols=16 Identities=31% Similarity=0.422 Sum_probs=11.4
Q ss_pred cccccccccccccccc
Q 037091 39 NKSESKKYSVRCSSES 54 (277)
Q Consensus 39 ~~~~~~~~~~~~~~~~ 54 (277)
+...|.|-|..|++.|
T Consensus 4 kgqscrktsydccsgs 19 (26)
T d1mvja_ 4 KGQSCRKTSYDCCSGS 19 (26)
T ss_dssp TTCCCCTTTCCBSSCC
T ss_pred cCcccccccccccccc
Confidence 3345667799999877
No 3
>d1iwga7 f.35.1.1 (A:7-37,A:331-498) Multidrug efflux transporter AcrB transmembrane domain {Escherichia coli [TaxId: 562]}
Probab=6.85 E-value=3.1e+02 Score=20.46 Aligned_cols=9 Identities=0% Similarity=0.135 Sum_probs=3.4
Q ss_pred HHHHHhhcc
Q 037091 162 NYANAINQL 170 (277)
Q Consensus 162 ~a~~viND~ 170 (277)
.+..++.++
T Consensus 109 ~~i~i~~~~ 117 (199)
T d1iwga7 109 DAIVVVENV 117 (199)
T ss_dssp HHHHHHHHH
T ss_pred cHHHHHHHH
Confidence 333344333
No 4
>d1j75a_ a.4.5.19 (A:) Dlm-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=5.02 E-value=26 Score=22.62 Aligned_cols=23 Identities=30% Similarity=0.375 Sum_probs=14.4
Q ss_pred ccccCCCC-cc------hhhhHHHhhhccc
Q 037091 16 HPLQHAGS-VK------TFQTRVKHINGLA 38 (277)
Q Consensus 16 ~~~~~~~~-~~------~~~~~~~~~~~~~ 38 (277)
|+|+++|+ |+ ..|+-+|..|..+
T Consensus 8 QVL~dagspvk~~ql~k~cqVpkk~lNqVL 37 (57)
T d1j75a_ 8 QVLSDDGGPVKIGQLVKKCQVPKKTLNQVL 37 (57)
T ss_dssp HHHHHHCSCEEHHHHHHHHCSCHHHHHHHH
T ss_pred HHHHhcCCchHHHHHHHHHCCCHHHHHHHH
Confidence 46777775 44 4455667777765
No 5
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.20 E-value=1.2e+02 Score=16.47 Aligned_cols=13 Identities=15% Similarity=0.381 Sum_probs=9.4
Q ss_pred cccccccccccccc
Q 037091 47 SVRCSSESSFFLTN 60 (277)
Q Consensus 47 ~~~~~~~~~~~~~~ 60 (277)
|++|+.-| +-++|
T Consensus 3 pfkcqlcs-y~srn 15 (29)
T d2dmda3 3 PFKCQICP-YASRN 15 (29)
T ss_dssp CEECSSSS-CEESS
T ss_pred cceeeecc-cccCC
Confidence 78888887 55555
No 6
>d2ahma1 a.8.9.1 (A:6-78) Nonstructural protein 7, NSP7 {SARS coronavirus [TaxId: 227859]}
Probab=3.83 E-value=5.5e+02 Score=16.71 Aligned_cols=29 Identities=17% Similarity=0.243 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 037091 144 PKLIIEAFKCMVPAIMMNNYANAINQLAD 172 (277)
Q Consensus 144 ~~~l~~~ll~lla~ll~~~a~~viND~~D 172 (277)
+..-..-+++++++++..-+...+++++|
T Consensus 45 ~~~a~e~l~~Ll~~lls~~~~~dl~~L~d 73 (73)
T d2ahma1 45 TTEAFEKMVSLLSVLLSMQGAVDINRLCE 73 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHcccccCCHHHhcC
Confidence 43334567788888888888888888776
No 7
>d2yvxa3 f.57.1.1 (A:276-448) Mg2+ transporter MgtE {Thermus thermophilus [TaxId: 274]}
Probab=3.44 E-value=3.5e+02 Score=20.26 Aligned_cols=34 Identities=9% Similarity=0.253 Sum_probs=17.0
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 037091 241 RWKGNPLMAAVTIISMNGLLLLFPFFIHFQKIVL 274 (277)
Q Consensus 241 rlKr~~ll~~l~i~~~~g~lv~~g~~~~~~~~~~ 274 (277)
|+|.-|-.++-...++-.+++.+-.|+.+-+.++
T Consensus 139 klg~DPA~aS~P~itti~Di~g~~iyf~iA~~~L 172 (173)
T d2yvxa3 139 RLGVDPALVSNPLVATLSDVTGLLIYLSVARLLL 172 (173)
T ss_dssp HTSCCGGGSCSTTHHHHHHHHHHHHHHHHHHTTC
T ss_pred HhCCChhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444444444555555555555555544443
No 8
>d2e74g1 f.23.26.1 (G:9-35) PetG subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=3.43 E-value=3.8e+02 Score=14.08 Aligned_cols=7 Identities=29% Similarity=0.942 Sum_probs=3.0
Q ss_pred HHHHHHH
Q 037091 265 FFIHFQK 271 (277)
Q Consensus 265 ~~~~~~~ 271 (277)
||.+.|+
T Consensus 14 f~aayqq 20 (27)
T d2e74g1 14 FYAAYQQ 20 (27)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3444444
No 9
>d1f7da_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) {Feline immunodeficiency virus [TaxId: 11673]}
Probab=3.28 E-value=87 Score=22.29 Aligned_cols=22 Identities=18% Similarity=-0.017 Sum_probs=14.1
Q ss_pred ccccCCCccccccccccCCCCcc
Q 037091 3 LQINPRSSFSLKYHPLQHAGSVK 25 (277)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~ 25 (277)
.++.||||++ |..-...+|-+|
T Consensus 50 ~~i~~RSsl~-~~gl~v~~GvID 71 (118)
T d1f7da_ 50 GLIIGKSSIG-SKGLDVLGGVID 71 (118)
T ss_dssp EEEECCHHHH-TTTEEEECCEEC
T ss_pred EEEEecccce-eeeEeecccccC
Confidence 4678999987 555444555554
No 10
>d1vyia_ d.293.1.1 (A:) Phosphoprotein M1, C-terminal domain {Rabies virus, strain CVS-11 [TaxId: 11292]}
Probab=3.05 E-value=1.9e+02 Score=20.34 Aligned_cols=29 Identities=34% Similarity=0.414 Sum_probs=20.2
Q ss_pred HHHhhhccccccccccccccccccccccccc
Q 037091 30 RVKHINGLANKSESKKYSVRCSSESSFFLTN 60 (277)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 60 (277)
.-.-+|.++ +|-+|||.+-+-|.+ -|+-|
T Consensus 13 EaEiaHQiA-ESfSKKYkFPSrSSG-IFL~N 41 (111)
T d1vyia_ 13 EAEIAHQIA-ESFSKKYKFPSRSSG-IFLYN 41 (111)
T ss_dssp HHHHHHHHH-HTTTCCEEEEBTTSC-EEEEC
T ss_pred HHHHHHHHH-HHhhhcccCCCCCCc-eEEec
Confidence 334455666 999999998887777 44555
Done!