BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>037105
MDEKWKLSKKDGSCSSSHASSSNKLPFTRSFSTKSTSSKSPLLQKSSSTKCPLPRSYSQK
GSSISRKCRGLAKEQKARFYIMRRCVAMLVCWHKHGDS

High Scoring Gene Products

Symbol, full name Information P value
RTFL2
AT2G29125
protein from Arabidopsis thaliana 8.4e-16
RTFL5
AT5G59510
protein from Arabidopsis thaliana 2.6e-15
RTFL3
AT1G07490
protein from Arabidopsis thaliana 2.2e-11
RTFL4
AT3G46613
protein from Arabidopsis thaliana 3.5e-11
RTFL8
AT2G39705
protein from Arabidopsis thaliana 4.2e-10
RTFL10
AT3G14362
protein from Arabidopsis thaliana 4.7e-09
RTFL7
AT3G55515
protein from Arabidopsis thaliana 4.7e-09
ROT4
AT2G36985
protein from Arabidopsis thaliana 1.8e-07
RTFL12
AT4G13395
protein from Arabidopsis thaliana 3.8e-07
RTFL6
AT4G35783
protein from Arabidopsis thaliana 3.8e-07
RTFL21
AT1G67265
protein from Arabidopsis thaliana 7.8e-07
RTFL15
ROTUNDIFOLIA like 15
protein from Arabidopsis thaliana 3.4e-06
RTFL17
AT1G13245
protein from Arabidopsis thaliana 2.4e-05
RTFL18
AT5G16023
protein from Arabidopsis thaliana 3.9e-05
RTFL16
AT3G25717
protein from Arabidopsis thaliana 8.1e-05
RTFL19
ROTUNDIFOLIA like 19
protein from Arabidopsis thaliana 0.00035
RTFL1
AT3G53232
protein from Arabidopsis thaliana 0.00045

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037105
        (98 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504955897 - symbol:RTFL2 "AT2G29125" species:3...   183  8.4e-16   2
TAIR|locus:2148388 - symbol:RTFL5 "AT5G59510" species:370...   193  2.6e-15   1
TAIR|locus:2024967 - symbol:RTFL3 "AT1G07490" species:370...   156  2.2e-11   1
TAIR|locus:4010713816 - symbol:RTFL4 "AT3G46613" species:...   154  3.5e-11   1
TAIR|locus:505006308 - symbol:RTFL8 "AT2G39705" species:3...   127  4.2e-10   2
TAIR|locus:4010713749 - symbol:RTFL10 "AT3G14362" species...   134  4.7e-09   1
TAIR|locus:4010713835 - symbol:RTFL7 "AT3G55515" species:...   134  4.7e-09   1
TAIR|locus:1006230132 - symbol:ROT4 "AT2G36985" species:3...   119  1.8e-07   1
TAIR|locus:4010713883 - symbol:RTFL12 "AT4G13395" species...   116  3.8e-07   1
TAIR|locus:4010713928 - symbol:RTFL6 "AT4G35783" species:...   116  3.8e-07   1
TAIR|locus:4010713584 - symbol:RTFL21 "AT1G67265" species...   113  7.8e-07   1
TAIR|locus:4010713587 - symbol:RTFL15 "ROTUNDIFOLIA like ...   107  3.4e-06   1
TAIR|locus:504956107 - symbol:RTFL17 "AT1G13245" species:...    99  2.4e-05   1
TAIR|locus:4010713959 - symbol:RTFL18 "AT5G16023" species...    97  3.9e-05   1
TAIR|locus:1005716552 - symbol:RTFL16 "AT3G25717" species...    94  8.1e-05   1
TAIR|locus:4010713725 - symbol:RTFL19 "ROTUNDIFOLIA like ...    88  0.00035   1
TAIR|locus:1006230270 - symbol:RTFL1 "AT3G53232" species:...    87  0.00045   1


>TAIR|locus:504955897 [details] [associations]
            symbol:RTFL2 "AT2G29125" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0048367 "shoot system development"
            evidence=ISS] InterPro:IPR012552 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0048367 Pfam:PF08137
            HOGENOM:HOG000239953 ProtClustDB:CLSN2714117 EMBL:AY136336
            EMBL:BT000101 EMBL:BK001756 IPI:IPI00545783 RefSeq:NP_850130.1
            UniGene:At.45004 IntAct:Q8L7D0 EnsemblPlants:AT2G29125.1
            GeneID:817461 KEGG:ath:AT2G29125 TAIR:At2g29125 eggNOG:NOG304353
            InParanoid:Q8L7D0 OMA:MEEKWKL Genevestigator:Q8L7D0 Uniprot:Q8L7D0
        Length = 115

 Score = 183 (69.5 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
 Identities = 35/44 (79%), Positives = 37/44 (84%)

Query:    55 RSYSQKGSSISRKCRGLAKEQKARFYIMRRCVAMLVCWHKHGDS 98
             RS S   SSI++K   LAKEQKARFYIMRRCVAMLVCWHKHGDS
Sbjct:    72 RSSSSSSSSITQKYSSLAKEQKARFYIMRRCVAMLVCWHKHGDS 115

 Score = 28 (14.9 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query:     1 MDEKW 5
             M+EKW
Sbjct:     1 MEEKW 5


>TAIR|locus:2148388 [details] [associations]
            symbol:RTFL5 "AT5G59510" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0048367 "shoot system development"
            evidence=ISS] [GO:0015824 "proline transport" evidence=RCA]
            InterPro:IPR012552 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0048367 Pfam:PF08137 HOGENOM:HOG000239953
            ProtClustDB:CLSN2680567 EMBL:AY085568 EMBL:BT024678 EMBL:BK001761
            IPI:IPI00531825 RefSeq:NP_200759.2 UniGene:At.29221 PaxDb:Q8LE84
            PRIDE:Q8LE84 EnsemblPlants:AT5G59510.1 GeneID:836070
            KEGG:ath:AT5G59510 TAIR:At5g59510 eggNOG:NOG324792
            InParanoid:Q8LE84 OMA:MAKEHKS PhylomeDB:Q8LE84
            Genevestigator:Q8LE84 Uniprot:Q8LE84
        Length = 144

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 34/49 (69%), Positives = 41/49 (83%)

Query:    51 CPLPRSYSQKGSSISRKCRGLAKEQKARFYIMRRCVAMLVCWHKHG-DS 98
             C + RS SQKG+S++RKCR +AKE K+RFYIM+RCV MLVCWHKH  DS
Sbjct:    96 CSISRSLSQKGASVTRKCRNMAKEHKSRFYIMKRCVLMLVCWHKHACDS 144


>TAIR|locus:2024967 [details] [associations]
            symbol:RTFL3 "AT1G07490" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0048367 "shoot system development"
            evidence=ISS] InterPro:IPR012552 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0048367 Pfam:PF08137
            HOGENOM:HOG000239953 EMBL:BT024668 EMBL:BK001752 IPI:IPI00542198
            RefSeq:NP_172229.2 UniGene:At.42298 PRIDE:Q6IM92
            EnsemblPlants:AT1G07490.1 GeneID:837263 KEGG:ath:AT1G07490
            TAIR:At1g07490 eggNOG:NOG270711 InParanoid:Q6IM92 OMA:CALPRSY
            ProtClustDB:CLSN2714117 Genevestigator:Q6IM92 Uniprot:Q6IM92
        Length = 107

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 33/47 (70%), Positives = 37/47 (78%)

Query:    53 LPRSYSQKGS-SISRKCRGLAKEQKARFYIMRRCVAMLVCWHKHGDS 98
             + RS S+K   SI++K   LAKEQK RFYIMRRCVAMLVCWHKH DS
Sbjct:    62 ISRSSSKKEKGSITQKYSSLAKEQKGRFYIMRRCVAMLVCWHKH-DS 107


>TAIR|locus:4010713816 [details] [associations]
            symbol:RTFL4 "AT3G46613" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0048367 "shoot system development"
            evidence=ISS] InterPro:IPR012552 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0048367 Pfam:PF08137
            HOGENOM:HOG000239953 EMBL:BK001758 IPI:IPI00548938
            RefSeq:NP_001078252.1 UniGene:At.72162 EnsemblPlants:AT3G46613.1
            GeneID:5008070 KEGG:ath:AT3G46613 TAIR:At3g46613 eggNOG:NOG300649
            OMA:IFQTTHF PhylomeDB:Q6IM86 ProtClustDB:CLSN2680567
            Genevestigator:Q6IM86 Uniprot:Q6IM86
        Length = 144

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 27/43 (62%), Positives = 35/43 (81%)

Query:    53 LPRSYSQKGSSISRKCRGLAKEQKARFYIMRRCVAMLVCWHKH 95
             L R  S+KG+S++ KC  +AKE K+RFYI++RCV MLVCWHKH
Sbjct:   101 LSRILSKKGASVTGKCFKVAKEHKSRFYIIKRCVLMLVCWHKH 143


>TAIR|locus:505006308 [details] [associations]
            symbol:RTFL8 "AT2G39705" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0048367 "shoot system development"
            evidence=ISS] [GO:0009062 "fatty acid catabolic process"
            evidence=RCA] [GO:0016925 "protein sumoylation" evidence=RCA]
            InterPro:IPR012552 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0048367 EMBL:AC003674 Pfam:PF08137 HOGENOM:HOG000239953
            EMBL:AY086777 EMBL:BT005173 EMBL:AK117621 EMBL:BK001754
            IPI:IPI00541719 RefSeq:NP_565910.1 UniGene:At.37140 IntAct:Q8S8S3
            PRIDE:Q8S8S3 EnsemblPlants:AT2G39705.1 GeneID:818554
            KEGG:ath:AT2G39705 TAIR:At2g39705 eggNOG:NOG244794
            InParanoid:Q8S8S3 OMA:RCAFTRK PhylomeDB:Q8S8S3
            ProtClustDB:CLSN2917283 ArrayExpress:Q8S8S3 Genevestigator:Q8S8S3
            Uniprot:Q8S8S3
        Length = 87

 Score = 127 (49.8 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
 Identities = 23/37 (62%), Positives = 28/37 (75%)

Query:    63 SISRKCRGLAKEQKARFYIMRRCVAMLVCWH-KHGDS 98
             + +RKC  L KEQ+ARFYIMRRCV ML+CW   + DS
Sbjct:    51 AFTRKCARLVKEQRARFYIMRRCVIMLICWRDNYSDS 87

 Score = 29 (15.3 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
 Identities = 4/5 (80%), Positives = 5/5 (100%)

Query:     1 MDEKW 5
             +DEKW
Sbjct:    15 LDEKW 19


>TAIR|locus:4010713749 [details] [associations]
            symbol:RTFL10 "AT3G14362" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0048367 "shoot system
            development" evidence=ISS] InterPro:IPR012552 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0048367 Pfam:PF08137
            UniGene:At.26368 UniGene:At.67221 EMBL:AK229109 EMBL:BK001762
            IPI:IPI00520536 RefSeq:NP_001078153.1 EnsemblPlants:AT3G14362.1
            GeneID:5008002 KEGG:ath:AT3G14362 TAIR:At3g14362 eggNOG:NOG303429
            HOGENOM:HOG000239953 PhylomeDB:Q6IM82 ProtClustDB:CLSN2699056
            Genevestigator:Q6IM82 Uniprot:Q6IM82
        Length = 48

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 24/45 (53%), Positives = 31/45 (68%)

Query:    53 LPRSYSQKGSSISRKCRGLAKEQKARFYIMRRCVAMLVCWHKHGD 97
             L R ++ KG + + KC  L KEQ+AR YI+RRC  ML CW+ HGD
Sbjct:     4 LKRKFN-KGHAFTSKCVSLVKEQRARLYILRRCATMLCCWYIHGD 47


>TAIR|locus:4010713835 [details] [associations]
            symbol:RTFL7 "AT3G55515" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0048367 "shoot system
            development" evidence=ISS] InterPro:IPR012552 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0048367 Pfam:PF08137
            HOGENOM:HOG000239953 EMBL:BK001751 IPI:IPI00522540
            RefSeq:NP_001078298.1 UniGene:At.72158 EnsemblPlants:AT3G55515.1
            GeneID:5008090 KEGG:ath:AT3G55515 TAIR:At3g55515 eggNOG:NOG248614
            OMA:IMRRCVV PhylomeDB:Q6IM93 ProtClustDB:CLSN2920179
            Genevestigator:Q6IM93 Uniprot:Q6IM93
        Length = 79

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 27/46 (58%), Positives = 32/46 (69%)

Query:    55 RSYSQK-GS-SISRKCRGLAKEQKARFYIMRRCVAMLVCWHKHGDS 98
             RS  QK G    +RKC  L KEQ+ARFYIMRRCV ML+CW  H ++
Sbjct:    29 RSSRQKQGKYGFTRKCGRLVKEQRARFYIMRRCVVMLICWTDHNNN 74


>TAIR|locus:1006230132 [details] [associations]
            symbol:ROT4 "AT2G36985" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0048367
            "shoot system development" evidence=ISS] [GO:0005886 "plasma
            membrane" evidence=IDA] [GO:0042127 "regulation of cell
            proliferation" evidence=IMP] InterPro:IPR012552 GO:GO:0005886
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0042127 GO:GO:0048367
            Pfam:PF08137 HOGENOM:HOG000239953 EMBL:BT026004 EMBL:AB107209
            EMBL:BK001759 IPI:IPI00529983 RefSeq:NP_973616.1 UniGene:At.64965
            EnsemblPlants:AT2G36985.1 GeneID:2745585 KEGG:ath:AT2G36985
            TAIR:At2g36985 eggNOG:NOG327833 InParanoid:Q7XXN8 OMA:VRRCIAM
            PhylomeDB:Q7XXN8 ProtClustDB:CLSN2681269 Genevestigator:Q7XXN8
            Uniprot:Q7XXN8
        Length = 53

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 18/31 (58%), Positives = 26/31 (83%)

Query:    63 SISRKCRGLAKEQKARFYIMRRCVAMLVCWH 93
             +  +KC  + K+Q+A+FYI+RRC+AMLVCWH
Sbjct:    14 TFGQKCSHVVKKQRAKFYILRRCIAMLVCWH 44


>TAIR|locus:4010713883 [details] [associations]
            symbol:RTFL12 "AT4G13395" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0048367 "shoot system
            development" evidence=ISS] InterPro:IPR012552 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0048367 Pfam:PF08137
            HOGENOM:HOG000239953 EMBL:BK001753 IPI:IPI00518594
            RefSeq:NP_001078384.1 UniGene:At.48017 UniGene:At.71973
            EnsemblPlants:AT4G13395.1 GeneID:5008138 KEGG:ath:AT4G13395
            TAIR:At4g13395 eggNOG:NOG244860 OMA:LLCWHDH PhylomeDB:Q6IM91
            ProtClustDB:CLSN2699101 Genevestigator:Q6IM91 Uniprot:Q6IM91
        Length = 55

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 21/46 (45%), Positives = 31/46 (67%)

Query:    53 LPRSYSQKGSSISRKCRGLAKEQKARFYIMRRCVAMLVCWHKHGDS 98
             LP   ++K +    +C  +AK+Q+ R YI+RRCV+ML+CWH H  S
Sbjct:    10 LPTKPNRK-TRFGDRCLLMAKQQRTRLYILRRCVSMLLCWHDHSIS 54


>TAIR|locus:4010713928 [details] [associations]
            symbol:RTFL6 "AT4G35783" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0048367 "shoot system
            development" evidence=ISS] InterPro:IPR012552 EMBL:CP002687
            GO:GO:0048367 Pfam:PF08137 EMBL:DQ487702 EMBL:BK001760
            IPI:IPI00846817 RefSeq:NP_001078498.1 UniGene:At.67529
            EnsemblPlants:AT4G35783.1 GeneID:5008183 KEGG:ath:AT4G35783
            TAIR:At4g35783 OMA:IARRCIL PhylomeDB:Q6IM84 ProtClustDB:CLSN2920192
            Genevestigator:Q6IM84 Uniprot:Q6IM84
        Length = 62

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 17/34 (50%), Positives = 27/34 (79%)

Query:    65 SRKCRGLAKEQKARFYIMRRCVAMLVCWHKHGDS 98
             ++ C  + KE+++RFYI RRC+ ML+CWHK+ +S
Sbjct:    29 NKGCLAMVKERRSRFYIARRCILMLLCWHKYANS 62


>TAIR|locus:4010713584 [details] [associations]
            symbol:RTFL21 "AT1G67265" species:3702 "Arabidopsis
            thaliana" [GO:0048367 "shoot system development" evidence=IMP]
            InterPro:IPR012552 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0048367 Pfam:PF08137 HOGENOM:HOG000142474 EMBL:AY254319
            IPI:IPI00516748 RefSeq:NP_001077782.1 UniGene:At.49512
            EnsemblPlants:AT1G67265.1 GeneID:5007837 KEGG:ath:AT1G67265
            TAIR:At1g67265 PhylomeDB:Q6X5U0 Genevestigator:Q6X5U0
            Uniprot:Q6X5U0
        Length = 40

 Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
 Identities = 19/36 (52%), Positives = 26/36 (72%)

Query:    58 SQKGSSISRKCRGLAKEQKARFYIMRRCVAMLVCWH 93
             ++K +  ++K  G  KEQK R YI+RRCV ML+CWH
Sbjct:     4 TKKKTPCNKKLGGYLKEQKGRLYIIRRCVVMLICWH 39


>TAIR|locus:4010713587 [details] [associations]
            symbol:RTFL15 "ROTUNDIFOLIA like 15" species:3702
            "Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
            [GO:0048367 "shoot system development" evidence=IMP]
            InterPro:IPR012552 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0048367 Pfam:PF08137 eggNOG:NOG300788 HOGENOM:HOG000142474
            EMBL:AY254321 IPI:IPI00540696 RefSeq:NP_001077795.1
            RefSeq:NP_001154459.1 UniGene:At.44172 EnsemblPlants:AT1G68825.1
            EnsemblPlants:AT1G68825.2 GeneID:5007840 KEGG:ath:AT1G68825
            TAIR:At1g68825 PhylomeDB:Q6X5T8 ProtClustDB:CLSN2699063
            Genevestigator:Q6X5T8 Uniprot:Q6X5T8
        Length = 46

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 18/29 (62%), Positives = 23/29 (79%)

Query:    65 SRKCRGLAKEQKARFYIMRRCVAMLVCWH 93
             SR   G+ +EQKA+ YI+RRCV ML+CWH
Sbjct:    17 SRGVGGVVREQKAKLYIIRRCVVMLLCWH 45


>TAIR|locus:504956107 [details] [associations]
            symbol:RTFL17 "AT1G13245" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0048367 "shoot system
            development" evidence=IMP] InterPro:IPR012552 EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC007357 GO:GO:0048367 Pfam:PF08137
            eggNOG:NOG300788 HOGENOM:HOG000142474 EMBL:AF325098 EMBL:AY085299
            EMBL:AY254320 EMBL:BT025298 EMBL:AK221719 IPI:IPI00531711
            RefSeq:NP_683303.1 UniGene:At.11267 EnsemblPlants:AT1G13245.1
            GeneID:837884 KEGG:ath:AT1G13245 TAIR:At1g13245 PhylomeDB:Q9SAF8
            Genevestigator:Q9SAF8 Uniprot:Q9SAF8
        Length = 41

 Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 18/31 (58%), Positives = 24/31 (77%)

Query:    64 ISRKCRG-LAKEQKARFYIMRRCVAMLVCWH 93
             +S K  G + KEQ+A+ YI+RRCV ML+CWH
Sbjct:    10 VSSKGLGAVLKEQRAKLYIIRRCVVMLLCWH 40


>TAIR|locus:4010713959 [details] [associations]
            symbol:RTFL18 "AT5G16023" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0048367 "shoot system
            development" evidence=IMP] [GO:0090437 "socket cell
            differentiation" evidence=IMP] InterPro:IPR012552 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0048367 Pfam:PF08137
            HOGENOM:HOG000142474 ProtClustDB:CLSN2920157 EMBL:AY254203
            IPI:IPI00541958 RefSeq:NP_001078592.1 UniGene:At.67653
            EnsemblPlants:AT5G16023.1 GeneID:5008214 KEGG:ath:AT5G16023
            TAIR:At5g16023 eggNOG:NOG265238 OMA:MKEQKGR PhylomeDB:Q6X5V0
            Genevestigator:Q6X5V0 GO:GO:0090437 Uniprot:Q6X5V0
        Length = 51

 Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 19/35 (54%), Positives = 24/35 (68%)

Query:    59 QKGSSISRKCRGLAKEQKARFYIMRRCVAMLVCWH 93
             +K  SISR+     KEQK R YI+RRC+ ML+C H
Sbjct:    16 EKKRSISRRLGKYMKEQKGRIYIIRRCMVMLLCSH 50


>TAIR|locus:1005716552 [details] [associations]
            symbol:RTFL16 "AT3G25717" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0048367 "shoot system
            development" evidence=ISS] InterPro:IPR012552 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0048367 Pfam:PF08137 EMBL:BK001749
            IPI:IPI00536651 RefSeq:NP_850631.2 UniGene:At.44163
            EnsemblPlants:AT3G25717.1 GeneID:822160 KEGG:ath:AT3G25717
            TAIR:At3g25717 eggNOG:NOG300788 HOGENOM:HOG000142474
            PhylomeDB:Q6IM95 Genevestigator:Q6IM95 Uniprot:Q6IM95
        Length = 40

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 16/30 (53%), Positives = 23/30 (76%)

Query:    63 SISRKCRGLAKEQKARFYIMRRCVAMLVCW 92
             S SR   G+ +EQ+A+ YI++RCV ML+CW
Sbjct:     9 SSSRGLGGVLREQRAKLYIIKRCVVMLLCW 38


>TAIR|locus:4010713725 [details] [associations]
            symbol:RTFL19 "ROTUNDIFOLIA like 19" species:3702
            "Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
            [GO:0048367 "shoot system development" evidence=IMP]
            InterPro:IPR012552 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0048367 Pfam:PF08137 HOGENOM:HOG000142474 EMBL:AY254318
            IPI:IPI00528878 RefSeq:NP_001078094.1 UniGene:At.51126
            EnsemblPlants:AT3G02493.1 GeneID:5007978 KEGG:ath:AT3G02493
            TAIR:At3g02493 eggNOG:NOG318129 PhylomeDB:Q6X5U1
            ProtClustDB:CLSN2920157 Genevestigator:Q6X5U1 Uniprot:Q6X5U1
        Length = 45

 Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
 Identities = 18/31 (58%), Positives = 21/31 (67%)

Query:    63 SISRKCRGLAKEQKARFYIMRRCVAMLVCWH 93
             S SR+     KEQK R YI+RRCV ML+C H
Sbjct:    14 SQSRRLGKYLKEQKGRIYIIRRCVMMLLCSH 44


>TAIR|locus:1006230270 [details] [associations]
            symbol:RTFL1 "AT3G53232" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0048367 "shoot system
            development" evidence=ISS] InterPro:IPR012552 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0048367 Pfam:PF08137
            HOGENOM:HOG000239953 EMBL:AY087313 EMBL:BT026012 EMBL:BK001763
            IPI:IPI00535554 RefSeq:NP_974421.1 UniGene:At.64155
            EnsemblPlants:AT3G53232.1 GeneID:2745963 KEGG:ath:AT3G53232
            TAIR:At3g53232 eggNOG:NOG308028 OMA:CKPSKTF PhylomeDB:Q8LBB5
            ProtClustDB:CLSN2915206 Genevestigator:Q8LBB5 Uniprot:Q8LBB5
        Length = 57

 Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
 Identities = 14/25 (56%), Positives = 21/25 (84%)

Query:    67 KCRGLAKEQKARFYIMRRCVAMLVC 91
             KC  + ++Q+A+FYI+ RC+AMLVC
Sbjct:    20 KCSHMVRKQRAKFYILGRCLAMLVC 44


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.135   0.466    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       98        54   0.00091  102 3  11 22  0.40    27
                                                     29  0.38    27


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  17
  No. of states in DFA:  524 (56 KB)
  Total size of DFA:  98 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  6.19u 0.21s 6.40t   Elapsed:  00:00:01
  Total cpu time:  6.19u 0.21s 6.40t   Elapsed:  00:00:01
  Start:  Fri May 10 22:34:19 2013   End:  Fri May 10 22:34:20 2013

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