Query 037105
Match_columns 98
No_of_seqs 91 out of 106
Neff 2.6
Searched_HMMs 13730
Date Mon Mar 25 14:36:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037105.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037105hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fada_ a.77.1.2 (A:) FADD (Mo 20.2 14 0.001 21.3 0.7 14 81-94 49-62 (95)
2 d3elna1 b.82.1.19 (A:5-190) Cy 13.1 14 0.001 24.4 -0.8 15 83-97 64-86 (186)
3 d2gf5a1 a.77.1.2 (A:89-191) FA 13.1 32 0.0023 20.0 1.0 14 81-94 49-62 (103)
4 d1w6ka2 a.102.4.2 (A:100-378) 12.9 50 0.0036 23.6 2.3 30 66-95 218-252 (279)
5 d1tf5a2 a.172.1.1 (A:571-780) 12.1 44 0.0032 21.6 1.6 21 67-87 28-48 (210)
6 d1nkta2 a.172.1.1 (A:616-835) 6.6 80 0.0058 20.4 1.1 20 68-87 29-48 (220)
7 d1pd0a1 a.71.2.1 (A:647-753) S 6.0 73 0.0053 19.0 0.6 20 76-95 24-43 (107)
8 d1icha_ a.77.1.2 (A:) Tumor ne 5.5 88 0.0064 17.4 0.7 14 81-94 41-54 (87)
9 d2chca1 d.17.4.25 (A:1-167) Un 5.4 60 0.0043 20.2 -0.1 10 2-11 117-126 (167)
10 d1fkma2 a.69.2.1 (A:443-630) Y 5.3 1.1E+02 0.0077 19.3 1.1 14 81-94 133-146 (188)
No 1
>d1fada_ a.77.1.2 (A:) FADD (Mort1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.18 E-value=14 Score=21.32 Aligned_cols=14 Identities=21% Similarity=0.501 Sum_probs=11.3
Q ss_pred hhhHHHHhhhhhcc
Q 037105 81 IMRRCVAMLVCWHK 94 (98)
Q Consensus 81 IiRRCv~MLlCwhd 94 (98)
+--+|..||..|.+
T Consensus 49 ~~e~~~~mL~~W~~ 62 (95)
T d1fada_ 49 LSERVRESLKVWKN 62 (95)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44679999999975
No 2
>d3elna1 b.82.1.19 (A:5-190) Cysteine dioxygenase type I {Rattus norvegicus [TaxId: 10116]}
Probab=13.15 E-value=14 Score=24.39 Aligned_cols=15 Identities=40% Similarity=1.070 Sum_probs=11.7
Q ss_pred hHHHHhhhhh--------cccCC
Q 037105 83 RRCVAMLVCW--------HKHGD 97 (98)
Q Consensus 83 RRCv~MLlCw--------hd~~~ 97 (98)
-++-++|+|| |||+.
T Consensus 64 ~~fel~li~W~pGq~tpiHDH~~ 86 (186)
T d3elna1 64 GKFNLMILCWGEGHGSSIHDHTD 86 (186)
T ss_dssp GTCEEEEEEECTTCBCCEECCTT
T ss_pred CCeEEEEEEccCCCcCCCccCCC
Confidence 3688899999 78853
No 3
>d2gf5a1 a.77.1.2 (A:89-191) FADD (Mort1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.05 E-value=32 Score=19.96 Aligned_cols=14 Identities=21% Similarity=0.487 Sum_probs=11.5
Q ss_pred hhhHHHHhhhhhcc
Q 037105 81 IMRRCVAMLVCWHK 94 (98)
Q Consensus 81 IiRRCv~MLlCwhd 94 (98)
.--+|..||..|.+
T Consensus 49 ~~e~~~~mL~~W~~ 62 (103)
T d2gf5a1 49 LTERVRESLRIWKN 62 (103)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44689999999985
No 4
>d1w6ka2 a.102.4.2 (A:100-378) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.95 E-value=50 Score=23.62 Aligned_cols=30 Identities=20% Similarity=0.294 Sum_probs=19.9
Q ss_pred hhHHHHHH-hhhhhehh----hhHHHHhhhhhccc
Q 037105 66 RKCRGLAK-EQKARFYI----MRRCVAMLVCWHKH 95 (98)
Q Consensus 66 ~rc~~~~K-eQRaRlYI----iRRCv~MLlCwhd~ 95 (98)
++|.+.+. ||+.-=|| |-..+-||.||+..
T Consensus 218 ~~a~~~i~~ede~t~~~glg~i~~~lnml~~~~~e 252 (279)
T d1w6ka2 218 QKLYEHIVADDRFTKSISIGPISKTINMLVRWYVD 252 (279)
T ss_dssp HHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcccchHHHHHHHHHHHcc
Confidence 45555554 56665554 66778999999544
No 5
>d1tf5a2 a.172.1.1 (A:571-780) Helical scaffold and wing domains of SecA {Bacillus subtilis [TaxId: 1423]}
Probab=12.06 E-value=44 Score=21.58 Aligned_cols=21 Identities=19% Similarity=0.256 Sum_probs=17.8
Q ss_pred hHHHHHHhhhhhehhhhHHHH
Q 037105 67 KCRGLAKEQKARFYIMRRCVA 87 (98)
Q Consensus 67 rc~~~~KeQRaRlYIiRRCv~ 87 (98)
..-.++.+||.-+|-.|+-|.
T Consensus 28 eyDdVln~QR~~IY~~R~~iL 48 (210)
T d1tf5a2 28 QYDDVLRQQREVIYKQRFEVI 48 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 345789999999999999875
No 6
>d1nkta2 a.172.1.1 (A:616-835) Helical scaffold and wing domains of SecA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=6.63 E-value=80 Score=20.37 Aligned_cols=20 Identities=20% Similarity=0.336 Sum_probs=16.3
Q ss_pred HHHHHHhhhhhehhhhHHHH
Q 037105 68 CRGLAKEQKARFYIMRRCVA 87 (98)
Q Consensus 68 c~~~~KeQRaRlYIiRRCv~ 87 (98)
--.++.+||..+|-.|+=|.
T Consensus 29 YDdVmn~QR~~IY~~R~~iL 48 (220)
T d1nkta2 29 YDEVMNQQRKVIYAERRRIL 48 (220)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHh
Confidence 34679999999999998653
No 7
>d1pd0a1 a.71.2.1 (A:647-753) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=5.99 E-value=73 Score=18.97 Aligned_cols=20 Identities=25% Similarity=0.411 Sum_probs=16.4
Q ss_pred hhhehhhhHHHHhhhhhccc
Q 037105 76 KARFYIMRRCVAMLVCWHKH 95 (98)
Q Consensus 76 RaRlYIiRRCv~MLlCwhd~ 95 (98)
-+|-.|..+||-+|.+++++
T Consensus 24 daR~~l~~~~v~~l~~Yr~~ 43 (107)
T d1pd0a1 24 DARVLINKSVQDILATYKKE 43 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 46788999999999988654
No 8
>d1icha_ a.77.1.2 (A:) Tumor necrosis factor receptor-1 death domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.48 E-value=88 Score=17.42 Aligned_cols=14 Identities=21% Similarity=0.570 Sum_probs=11.1
Q ss_pred hhhHHHHhhhhhcc
Q 037105 81 IMRRCVAMLVCWHK 94 (98)
Q Consensus 81 IiRRCv~MLlCwhd 94 (98)
+-..|..||..|.+
T Consensus 41 ~~eq~~~mL~~W~~ 54 (87)
T d1icha_ 41 LREAQYSMLATWRR 54 (87)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34689999999965
No 9
>d2chca1 d.17.4.25 (A:1-167) Uncharacterized protein Rv3472 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=5.43 E-value=60 Score=20.18 Aligned_cols=10 Identities=20% Similarity=0.883 Sum_probs=8.0
Q ss_pred ccccccccCC
Q 037105 2 DEKWKLSKKD 11 (98)
Q Consensus 2 dekWKlSkk~ 11 (98)
|+.||+++..
T Consensus 117 dg~WkIs~R~ 126 (167)
T d2chca1 117 DGQWRIAYRR 126 (167)
T ss_dssp TTEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 6889998765
No 10
>d1fkma2 a.69.2.1 (A:443-630) Ypt/Rab-GAP domain of gyp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=5.26 E-value=1.1e+02 Score=19.29 Aligned_cols=14 Identities=29% Similarity=0.681 Sum_probs=8.9
Q ss_pred hhhHHHHhhhhhcc
Q 037105 81 IMRRCVAMLVCWHK 94 (98)
Q Consensus 81 IiRRCv~MLlCwhd 94 (98)
.+..|++||+.|.+
T Consensus 133 ~~~~c~A~L~~~r~ 146 (188)
T d1fkma2 133 HVFVCAAFLIKWSD 146 (188)
T ss_dssp HHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45567777776654
Done!