Query 037111
Match_columns 964
No_of_seqs 1024 out of 7020
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 14:45:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037111.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037111hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 9.9E-84 3.4E-88 794.5 40.1 598 1-611 2-750 (768)
2 3rgz_A Protein brassinosteroid 100.0 4.6E-64 1.6E-68 619.2 36.0 510 84-597 77-715 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 8.8E-61 3E-65 584.9 40.6 554 48-602 4-625 (680)
4 3t6q_A CD180 antigen; protein- 100.0 1.1E-59 3.9E-64 567.3 33.4 501 77-580 26-564 (606)
5 1ziw_A TOLL-like receptor 3; i 100.0 4.8E-58 1.6E-62 560.8 43.8 537 55-597 2-595 (680)
6 3vq2_A TLR4, TOLL-like recepto 100.0 3.2E-58 1.1E-62 554.6 36.1 494 77-581 25-563 (606)
7 4eco_A Uncharacterized protein 100.0 2.2E-59 7.5E-64 564.2 23.4 486 7-529 26-601 (636)
8 3j0a_A TOLL-like receptor 5; m 100.0 1.8E-57 6.2E-62 566.3 41.4 485 82-580 22-564 (844)
9 3t6q_A CD180 antigen; protein- 100.0 4.3E-57 1.5E-61 544.8 33.8 504 92-601 20-562 (606)
10 4ecn_A Leucine-rich repeat pro 100.0 2.8E-57 9.6E-62 553.2 28.2 510 6-552 264-864 (876)
11 3vq2_A TLR4, TOLL-like recepto 100.0 4.1E-56 1.4E-60 536.3 33.8 502 88-602 15-561 (606)
12 3j0a_A TOLL-like receptor 5; m 100.0 8.6E-55 2.9E-59 542.1 41.6 498 88-602 8-563 (844)
13 2z63_A TOLL-like receptor 4, v 100.0 6.2E-53 2.1E-57 504.9 30.2 497 77-582 21-537 (570)
14 2z81_A CD282 antigen, TOLL-lik 100.0 7.5E-53 2.6E-57 501.6 28.0 492 47-581 3-515 (549)
15 4eco_A Uncharacterized protein 100.0 2E-52 6.8E-57 503.6 16.3 441 84-578 81-602 (636)
16 2z63_A TOLL-like receptor 4, v 100.0 4.8E-50 1.6E-54 479.9 34.2 502 89-602 12-534 (570)
17 3omv_A RAF proto-oncogene seri 100.0 6.4E-51 2.2E-55 437.9 23.5 257 688-962 35-296 (307)
18 4gt4_A Tyrosine-protein kinase 100.0 4.3E-51 1.5E-55 441.6 20.7 255 689-963 26-303 (308)
19 4b9d_A Serine/threonine-protei 100.0 2.7E-51 9.3E-56 446.7 18.9 253 688-959 23-276 (350)
20 4asz_A BDNF/NT-3 growth factor 100.0 4.7E-51 1.6E-55 439.3 19.9 253 689-962 13-285 (299)
21 4aoj_A High affinity nerve gro 100.0 3E-50 1E-54 439.3 23.8 253 689-962 41-315 (329)
22 2z7x_B TOLL-like receptor 1, v 100.0 5E-50 1.7E-54 473.7 24.9 456 88-580 4-485 (520)
23 4g8a_A TOLL-like receptor 4; l 100.0 8.5E-49 2.9E-53 475.6 36.1 530 28-580 10-584 (635)
24 4ecn_A Leucine-rich repeat pro 100.0 6E-50 2.1E-54 488.6 23.8 465 84-577 323-865 (876)
25 2z81_A CD282 antigen, TOLL-lik 100.0 6.1E-49 2.1E-53 467.9 28.6 480 87-601 8-512 (549)
26 4fih_A Serine/threonine-protei 100.0 5.8E-49 2E-53 427.7 23.0 249 689-959 74-323 (346)
27 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.4E-49 1.2E-53 422.8 19.2 247 689-957 32-282 (311)
28 3fpq_A Serine/threonine-protei 100.0 5.1E-48 1.7E-52 412.3 25.9 246 692-959 29-282 (290)
29 3ubd_A Ribosomal protein S6 ki 100.0 2.9E-49 9.9E-54 423.8 16.0 248 689-958 24-280 (304)
30 2z7x_B TOLL-like receptor 1, v 100.0 2.5E-48 8.5E-53 459.2 24.8 452 63-556 4-485 (520)
31 4g3f_A NF-kappa-beta-inducing 100.0 1.1E-48 3.8E-53 424.2 19.7 249 688-962 57-312 (336)
32 3hyh_A Carbon catabolite-derep 100.0 3.6E-48 1.2E-52 409.6 22.9 248 688-959 12-262 (275)
33 3hmm_A TGF-beta receptor type- 100.0 5.8E-48 2E-52 418.7 23.8 267 689-962 3-293 (303)
34 4fie_A Serine/threonine-protei 100.0 8.6E-48 2.9E-52 428.8 24.5 249 689-959 151-400 (423)
35 4ase_A Vascular endothelial gr 100.0 5.1E-48 1.7E-52 424.9 17.1 261 683-962 58-343 (353)
36 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9E-47 3.1E-51 449.6 23.7 462 62-581 34-515 (562)
37 4g31_A Eukaryotic translation 100.0 1.8E-46 6E-51 404.6 21.6 250 688-959 4-279 (299)
38 4g8a_A TOLL-like receptor 4; l 100.0 6.4E-45 2.2E-49 441.5 34.0 501 89-601 36-582 (635)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.7E-45 1.6E-49 434.8 23.7 436 59-556 52-514 (562)
40 4b99_A Mitogen-activated prote 100.0 6.5E-44 2.2E-48 399.4 23.9 253 689-959 54-344 (398)
41 4f9c_A Cell division cycle 7-r 100.0 2.1E-43 7.3E-48 391.2 22.4 199 684-894 16-249 (361)
42 3v5w_A G-protein coupled recep 100.0 4.9E-43 1.7E-47 407.1 24.1 250 688-958 188-448 (689)
43 1jl5_A Outer protein YOPM; leu 100.0 4.2E-43 1.4E-47 403.7 20.4 420 83-581 10-434 (454)
44 3v47_A TOLL-like receptor 5B a 100.0 2.2E-42 7.7E-47 401.1 25.2 373 82-484 28-412 (455)
45 1ogq_A PGIP-2, polygalacturona 100.0 2E-43 6.8E-48 387.1 14.7 292 6-310 1-302 (313)
46 3v47_A TOLL-like receptor 5B a 100.0 2E-42 6.9E-47 401.5 23.7 393 157-583 12-415 (455)
47 3uto_A Twitchin; kinase, muscl 100.0 3.4E-42 1.2E-46 405.0 23.6 252 688-959 156-410 (573)
48 1jl5_A Outer protein YOPM; leu 100.0 2.1E-42 7.3E-47 397.8 16.3 406 101-581 5-416 (454)
49 3uim_A Brassinosteroid insensi 100.0 1.3E-41 4.5E-46 376.1 19.1 284 677-964 18-309 (326)
50 2qkw_B Protein kinase; three-h 100.0 6.2E-41 2.1E-45 369.7 23.8 269 684-962 34-311 (321)
51 3fe3_A MAP/microtubule affinit 100.0 7E-41 2.4E-45 368.8 23.1 249 688-959 14-264 (328)
52 3p86_A Serine/threonine-protei 100.0 4.4E-41 1.5E-45 368.0 21.1 258 686-962 34-294 (309)
53 3s95_A LIMK-1, LIM domain kina 100.0 6E-40 2E-44 360.0 28.4 255 688-962 9-278 (310)
54 3fxz_A Serine/threonine-protei 100.0 3.6E-40 1.2E-44 358.8 25.9 250 688-959 19-269 (297)
55 1o6l_A RAC-beta serine/threoni 100.0 5.2E-40 1.8E-44 362.8 24.8 250 688-959 4-260 (337)
56 2psq_A Fibroblast growth facto 100.0 3.8E-40 1.3E-44 369.9 23.2 255 688-962 80-360 (370)
57 2c30_A Serine/threonine-protei 100.0 1.9E-39 6.5E-44 357.2 28.3 262 676-959 22-294 (321)
58 3zgw_A Maternal embryonic leuc 100.0 2.9E-40 9.8E-45 365.8 21.4 249 688-959 9-260 (347)
59 3niz_A Rhodanese family protei 100.0 1.4E-39 4.9E-44 356.6 26.7 259 688-959 20-300 (311)
60 3soa_A Calcium/calmodulin-depe 100.0 9.5E-40 3.2E-44 373.6 25.5 255 687-959 9-267 (444)
61 3soc_A Activin receptor type-2 100.0 3.4E-40 1.2E-44 363.6 20.9 268 688-962 23-314 (322)
62 3lb7_A RAF proto-oncogene seri 100.0 1.1E-39 3.8E-44 356.6 23.9 257 688-962 35-296 (307)
63 3kul_A Ephrin type-A receptor 100.0 7.6E-40 2.6E-44 361.0 22.6 254 688-962 48-309 (325)
64 2yab_A Death-associated protei 100.0 1.8E-39 6E-44 361.8 25.6 253 688-959 11-272 (361)
65 4dc2_A Protein kinase C IOTA t 100.0 1E-39 3.6E-44 366.7 22.7 255 687-954 50-307 (396)
66 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.6E-40 1.6E-44 365.7 19.1 252 686-959 20-280 (353)
67 3bz5_A Internalin-J, INLJ; leu 100.0 8.5E-40 2.9E-44 376.5 21.9 369 90-581 24-392 (457)
68 3c0i_A Peripheral plasma membr 100.0 1.1E-39 3.9E-44 363.6 22.0 254 689-959 24-286 (351)
69 4eqm_A Protein kinase; transfe 100.0 1.8E-39 6.3E-44 352.8 23.0 258 689-963 11-272 (294)
70 4hcu_A Tyrosine-protein kinase 100.0 1E-39 3.4E-44 350.4 20.5 251 689-962 10-262 (269)
71 2bdw_A Hypothetical protein K1 100.0 2.2E-39 7.5E-44 362.3 24.0 254 687-959 27-284 (362)
72 1ob3_A PFPK5, cell division co 100.0 1.1E-39 3.7E-44 353.8 20.8 255 689-959 2-280 (288)
73 3cbl_A C-FES, proto-oncogene t 100.0 5.2E-40 1.8E-44 370.2 18.6 253 688-962 113-370 (377)
74 3o0g_A Cell division protein k 100.0 2.4E-39 8E-44 352.0 22.8 256 689-959 2-282 (292)
75 3bz5_A Internalin-J, INLJ; leu 100.0 2.3E-39 8E-44 372.8 23.9 228 78-332 36-263 (457)
76 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.4E-39 5E-44 349.0 20.6 253 688-963 7-261 (268)
77 3a8x_A Protein kinase C IOTA t 100.0 3.1E-39 1.1E-43 358.3 24.0 254 688-954 8-264 (345)
78 2qol_A Ephrin receptor; recept 100.0 1.1E-39 3.8E-44 366.2 20.3 252 689-962 45-305 (373)
79 1tki_A Titin; serine kinase, m 100.0 2.2E-39 7.6E-44 356.3 21.9 251 688-959 4-257 (321)
80 2nru_A Interleukin-1 receptor- 100.0 1.1E-38 3.6E-43 349.6 27.0 272 677-962 13-302 (307)
81 3kmu_A ILK, integrin-linked ki 100.0 2.6E-39 8.9E-44 347.6 21.6 251 688-962 9-266 (271)
82 3ugc_A Tyrosine-protein kinase 100.0 3E-40 1E-44 359.7 14.0 264 688-962 9-287 (295)
83 3q4u_A Activin receptor type-1 100.0 3.6E-39 1.2E-43 352.3 22.5 256 688-962 7-298 (301)
84 1qcf_A Haematopoetic cell kina 100.0 9.6E-40 3.3E-44 377.2 18.8 252 688-963 187-441 (454)
85 2y0a_A Death-associated protei 100.0 6.9E-39 2.4E-43 353.6 24.4 253 688-959 10-271 (326)
86 1xjd_A Protein kinase C, theta 100.0 1.3E-39 4.3E-44 360.6 18.0 252 685-958 13-268 (345)
87 2i0e_A Protein kinase C-beta I 100.0 4E-39 1.4E-43 357.9 21.9 250 687-958 18-275 (353)
88 4euu_A Serine/threonine-protei 100.0 1.3E-38 4.4E-43 350.8 25.5 261 689-961 9-304 (319)
89 3a62_A Ribosomal protein S6 ki 100.0 5.3E-39 1.8E-43 354.6 22.3 250 688-959 16-276 (327)
90 1fot_A TPK1 delta, CAMP-depend 100.0 8.8E-39 3E-43 350.4 23.7 247 688-959 5-258 (318)
91 1luf_A Muscle-specific tyrosin 100.0 2.9E-39 9.8E-44 360.2 20.1 256 687-962 45-331 (343)
92 1k9a_A Carboxyl-terminal SRC k 100.0 4.8E-39 1.6E-43 370.6 22.6 247 688-962 192-441 (450)
93 3tki_A Serine/threonine-protei 100.0 3.5E-39 1.2E-43 355.3 20.2 252 688-959 6-261 (323)
94 3tt0_A Basic fibroblast growth 100.0 5.6E-39 1.9E-43 362.6 22.4 255 688-962 68-348 (382)
95 2zv2_A Calcium/calmodulin-depe 100.0 4.8E-39 1.6E-43 350.6 21.1 251 688-959 12-292 (298)
96 3gen_A Tyrosine-protein kinase 100.0 4.1E-39 1.4E-43 348.4 20.2 252 688-962 23-276 (283)
97 1o6v_A Internalin A; bacterial 100.0 2.4E-38 8.4E-43 367.5 28.1 347 81-481 43-389 (466)
98 1rdq_E PKA C-alpha, CAMP-depen 100.0 8.9E-39 3.1E-43 355.1 23.3 247 688-959 40-293 (350)
99 3l9p_A Anaplastic lymphoma kin 100.0 2.5E-39 8.4E-44 363.1 18.9 255 688-962 70-341 (367)
100 4fr4_A YANK1, serine/threonine 100.0 8.8E-39 3E-43 358.1 23.3 252 688-959 14-271 (384)
101 3qd2_B Eukaryotic translation 100.0 1.1E-38 3.7E-43 353.8 23.3 251 687-959 4-325 (332)
102 3og7_A AKAP9-BRAF fusion prote 100.0 5.8E-39 2E-43 348.3 20.3 257 688-962 23-284 (289)
103 2r5t_A Serine/threonine-protei 100.0 5.3E-39 1.8E-43 359.4 20.5 247 688-956 37-286 (373)
104 3gni_B Strad alpha; kinase fol 100.0 1E-38 3.5E-43 361.8 23.2 204 688-894 24-239 (389)
105 1opk_A P150, C-ABL, proto-onco 100.0 2.7E-39 9.4E-44 376.8 18.9 254 688-963 219-475 (495)
106 2pmi_A Negative RE, cyclin-dep 100.0 9.5E-39 3.2E-43 351.2 21.5 256 688-959 4-293 (317)
107 2ivs_A Proto-oncogene tyrosine 100.0 8.4E-39 2.9E-43 351.7 21.1 255 688-962 22-307 (314)
108 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.3E-39 1.1E-43 372.2 18.3 252 688-963 183-437 (452)
109 3p1a_A MYT1 kinase, membrane-a 100.0 1.1E-38 3.8E-43 349.7 21.6 246 689-959 57-304 (311)
110 3kn6_A Ribosomal protein S6 ki 100.0 7E-39 2.4E-43 353.2 20.1 250 694-959 16-270 (325)
111 1o6v_A Internalin A; bacterial 100.0 6.3E-38 2.1E-42 364.1 29.2 344 59-457 46-389 (466)
112 3dtc_A Mitogen-activated prote 100.0 6.8E-39 2.3E-43 344.3 19.5 255 688-963 6-270 (271)
113 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.2E-39 1.1E-43 356.1 17.2 248 688-959 8-258 (336)
114 4f0f_A Serine/threonine-protei 100.0 2.5E-38 8.5E-43 343.1 24.0 253 689-963 19-286 (287)
115 3qup_A Tyrosine-protein kinase 100.0 6.7E-39 2.3E-43 353.9 19.8 256 688-962 22-294 (323)
116 1kob_A Twitchin; kinase, intra 100.0 2.3E-38 8E-43 356.0 24.2 252 688-959 50-304 (387)
117 4aw2_A Serine/threonine-protei 100.0 2.3E-39 8E-44 368.8 16.3 259 681-959 66-338 (437)
118 4agu_A Cyclin-dependent kinase 100.0 1.7E-38 5.7E-43 348.8 22.1 259 688-959 2-284 (311)
119 3kk8_A Calcium/calmodulin depe 100.0 3.5E-38 1.2E-42 341.3 23.9 253 688-959 5-261 (284)
120 3vhe_A Vascular endothelial gr 100.0 2.3E-39 7.8E-44 363.4 15.0 262 682-962 15-351 (359)
121 2izr_A Casein kinase I isoform 100.0 5.6E-39 1.9E-43 355.5 17.6 255 689-962 9-277 (330)
122 1mp8_A Focal adhesion kinase 1 100.0 1.3E-38 4.3E-43 344.1 19.9 253 688-962 14-272 (281)
123 2wqm_A Serine/threonine-protei 100.0 3.6E-38 1.2E-42 345.9 23.6 260 687-962 30-293 (310)
124 4ejn_A RAC-alpha serine/threon 100.0 9.7E-39 3.3E-43 368.3 20.0 250 688-959 147-404 (446)
125 3t9t_A Tyrosine-protein kinase 100.0 1.3E-38 4.4E-43 341.4 19.6 251 689-962 8-260 (267)
126 3kfa_A Tyrosine-protein kinase 100.0 3E-39 1E-43 350.5 14.7 254 687-962 11-267 (288)
127 2w5a_A Serine/threonine-protei 100.0 8E-39 2.7E-43 345.4 17.9 256 688-962 5-270 (279)
128 1t46_A HOMO sapiens V-KIT hard 100.0 1.1E-38 3.8E-43 350.5 19.1 256 688-962 22-303 (313)
129 2y94_A 5'-AMP-activated protei 100.0 2.9E-38 9.9E-43 363.5 23.2 249 688-959 15-266 (476)
130 3cok_A Serine/threonine-protei 100.0 1.5E-38 5.2E-43 343.0 19.6 252 687-959 9-262 (278)
131 2x4f_A Myosin light chain kina 100.0 3.2E-38 1.1E-42 354.1 23.0 249 691-959 91-342 (373)
132 3uc3_A Serine/threonine-protei 100.0 2.3E-38 7.8E-43 354.1 21.3 252 688-959 19-274 (361)
133 1csn_A Casein kinase-1; phosph 100.0 1.3E-38 4.3E-43 347.4 18.8 256 689-962 10-279 (298)
134 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.8E-38 9.7E-43 367.3 22.8 251 688-954 184-438 (543)
135 3mtl_A Cell division protein k 100.0 7.6E-39 2.6E-43 353.2 17.1 265 689-959 2-281 (324)
136 2w4o_A Calcium/calmodulin-depe 100.0 2.3E-38 8E-43 352.5 21.1 250 688-959 52-305 (349)
137 2a2a_A Death-associated protei 100.0 6.1E-38 2.1E-42 345.7 24.1 253 688-959 11-272 (321)
138 2pvf_A Fibroblast growth facto 100.0 2.6E-38 8.9E-43 350.7 21.2 255 688-962 34-314 (334)
139 3dbq_A Dual specificity protei 100.0 3.9E-38 1.3E-42 350.5 22.6 250 689-959 9-273 (343)
140 3v8s_A RHO-associated protein 100.0 3.6E-39 1.2E-43 364.5 14.4 254 683-959 63-329 (410)
141 1qpc_A LCK kinase; alpha beta 100.0 1.6E-38 5.4E-43 343.1 18.8 252 688-962 12-265 (279)
142 1rjb_A FL cytokine receptor; k 100.0 1.2E-38 4.1E-43 355.2 18.3 257 687-962 43-330 (344)
143 3fdn_A Serine/threonine-protei 100.0 4.2E-38 1.4E-42 339.7 21.9 249 687-959 7-257 (279)
144 2qr7_A Ribosomal protein S6 ki 100.0 1.6E-38 5.5E-43 352.1 19.1 252 687-959 20-277 (342)
145 2acx_A G protein-coupled recep 100.0 2.5E-38 8.4E-43 368.3 21.3 255 688-959 183-444 (576)
146 4e5w_A Tyrosine-protein kinase 100.0 1.7E-38 5.8E-43 347.1 18.7 264 689-962 21-298 (302)
147 3poz_A Epidermal growth factor 100.0 1.6E-38 5.3E-43 351.2 18.5 252 689-962 15-274 (327)
148 3mdy_A Bone morphogenetic prot 100.0 1.4E-37 4.8E-42 345.6 26.3 271 683-962 31-327 (337)
149 2zmd_A Dual specificity protei 100.0 6.2E-38 2.1E-42 354.3 23.6 250 689-959 56-320 (390)
150 3ork_A Serine/threonine protei 100.0 1.1E-38 3.7E-43 349.9 16.9 253 689-959 12-273 (311)
151 2eva_A TAK1 kinase - TAB1 chim 100.0 3.5E-38 1.2E-42 345.0 20.9 251 688-962 7-259 (307)
152 2id5_A Lingo-1, leucine rich r 100.0 2.1E-38 7.1E-43 369.8 20.2 348 230-604 14-361 (477)
153 3f3z_A Calcium/calmodulin-depe 100.0 1.1E-37 3.6E-42 336.2 23.9 250 688-959 8-261 (277)
154 3hko_A Calcium/calmodulin-depe 100.0 4.4E-38 1.5E-42 350.8 21.6 259 685-959 22-330 (345)
155 3lm5_A Serine/threonine-protei 100.0 2.8E-38 9.7E-43 349.1 19.8 266 677-959 16-287 (327)
156 3g33_A Cell division protein k 100.0 5E-38 1.7E-42 344.3 21.5 257 687-959 7-296 (308)
157 2rku_A Serine/threonine-protei 100.0 8.6E-38 2.9E-42 340.1 23.0 250 688-959 14-265 (294)
158 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.3E-38 7.8E-43 350.2 18.5 258 685-959 30-318 (329)
159 3brb_A Proto-oncogene tyrosine 100.0 4.9E-38 1.7E-42 345.3 21.0 257 687-962 32-304 (313)
160 2eue_A Carbon catabolite derep 100.0 4.3E-38 1.5E-42 338.9 20.1 248 688-959 12-262 (275)
161 2r3i_A Cell division protein k 100.0 5.3E-38 1.8E-42 342.7 21.0 257 688-959 2-283 (299)
162 1mqb_A Ephrin type-A receptor 100.0 7.7E-38 2.6E-42 346.4 22.4 253 689-962 44-305 (333)
163 3op5_A Serine/threonine-protei 100.0 7.6E-39 2.6E-43 359.3 14.4 263 688-962 34-325 (364)
164 1p4o_A Insulin-like growth fac 100.0 3.4E-38 1.2E-42 348.1 19.4 258 686-963 22-296 (322)
165 4aaa_A Cyclin-dependent kinase 100.0 3.5E-38 1.2E-42 349.2 19.4 267 688-959 24-306 (331)
166 1nxk_A MAP kinase-activated pr 100.0 6.8E-38 2.3E-42 355.0 22.0 252 688-959 60-321 (400)
167 1xbb_A Tyrosine-protein kinase 100.0 6.2E-38 2.1E-42 340.6 20.8 253 688-962 15-275 (291)
168 3bhy_A Death-associated protei 100.0 1.5E-37 5.2E-42 336.2 23.7 252 689-959 5-265 (283)
169 1u5q_A Serine/threonine protei 100.0 6.6E-38 2.3E-42 348.3 21.4 247 689-959 54-305 (348)
170 2h34_A Serine/threonine-protei 100.0 7E-38 2.4E-42 343.1 21.1 258 686-962 31-292 (309)
171 2vd5_A DMPK protein; serine/th 100.0 3.1E-38 1.1E-42 357.0 18.8 260 681-959 53-327 (412)
172 3c1x_A Hepatocyte growth facto 100.0 2.5E-38 8.5E-43 354.8 17.8 252 690-962 90-351 (373)
173 2h8h_A Proto-oncogene tyrosine 100.0 1.4E-38 4.8E-43 374.3 16.4 252 688-963 266-520 (535)
174 3kex_A Receptor tyrosine-prote 100.0 2.2E-38 7.4E-43 349.8 16.9 251 689-962 13-272 (325)
175 2owb_A Serine/threonine-protei 100.0 9.9E-38 3.4E-42 346.0 22.1 250 688-959 40-291 (335)
176 3n9x_A Phosphotransferase; mal 100.0 1.2E-37 4.1E-42 357.2 23.5 265 689-959 26-361 (432)
177 3dls_A PAS domain-containing s 100.0 4.9E-38 1.7E-42 347.8 19.5 244 687-959 22-274 (335)
178 2id5_A Lingo-1, leucine rich r 100.0 5.5E-38 1.9E-42 366.3 21.0 311 77-387 25-336 (477)
179 3f66_A Hepatocyte growth facto 100.0 9E-38 3.1E-42 340.7 21.2 253 689-962 25-287 (298)
180 2i1m_A Macrophage colony-stimu 100.0 6.5E-39 2.2E-43 355.6 12.4 257 687-962 44-322 (333)
181 3llt_A Serine/threonine kinase 100.0 2.6E-37 9.1E-42 346.6 25.4 198 687-894 33-261 (360)
182 4eut_A Serine/threonine-protei 100.0 6.7E-38 2.3E-42 355.4 20.7 262 689-962 9-305 (396)
183 3mwu_A Calmodulin-domain prote 100.0 1.6E-37 5.4E-42 362.4 24.4 252 688-959 21-276 (486)
184 3gxj_A TGF-beta receptor type- 100.0 3.5E-39 1.2E-43 352.7 9.8 263 689-963 3-294 (303)
185 3pls_A Macrophage-stimulating 100.0 1.3E-37 4.4E-42 339.5 22.1 253 690-962 22-283 (298)
186 4fvq_A Tyrosine-protein kinase 100.0 4.6E-38 1.6E-42 341.3 18.5 247 689-963 8-272 (289)
187 2y7j_A Phosphorylase B kinase 100.0 2.5E-37 8.7E-42 346.4 25.1 262 679-959 84-359 (365)
188 3lxp_A Non-receptor tyrosine-p 100.0 2.5E-38 8.7E-43 348.1 16.6 261 691-962 33-306 (318)
189 2ac3_A MAP kinase-interacting 100.0 1.4E-37 4.8E-42 342.2 22.3 262 689-959 12-295 (316)
190 1x8b_A WEE1HU, WEE1-like prote 100.0 1.2E-37 4.2E-42 337.8 21.5 247 687-959 9-279 (289)
191 2v62_A Serine/threonine-protei 100.0 2.6E-38 9E-43 352.1 16.6 262 689-963 37-325 (345)
192 1u59_A Tyrosine-protein kinase 100.0 1.2E-37 4.2E-42 337.6 21.3 252 689-962 9-268 (287)
193 2yex_A Serine/threonine-protei 100.0 2.4E-37 8.4E-42 333.2 23.4 253 687-959 5-261 (276)
194 3lxl_A Tyrosine-protein kinase 100.0 6.3E-38 2.1E-42 346.6 19.1 264 689-962 23-299 (327)
195 3oz6_A Mitogen-activated prote 100.0 6.4E-38 2.2E-42 355.0 19.6 202 686-894 6-233 (388)
196 3a7i_A MST3 kinase, serine/thr 100.0 1.7E-37 6E-42 339.2 22.3 248 689-959 22-270 (303)
197 3rp9_A Mitogen-activated prote 100.0 1.8E-37 6.3E-42 359.3 23.7 197 689-891 53-283 (458)
198 3lij_A Calcium/calmodulin depe 100.0 2.2E-37 7.6E-42 361.6 24.5 252 688-959 36-291 (494)
199 1byg_A CSK, protein (C-termina 100.0 4.1E-38 1.4E-42 339.6 16.7 248 688-962 20-269 (278)
200 3cc6_A Protein tyrosine kinase 100.0 1.1E-37 3.8E-42 336.8 20.1 253 688-962 11-269 (281)
201 3lzb_A Epidermal growth factor 100.0 9.7E-38 3.3E-42 344.5 19.8 252 689-962 15-274 (327)
202 3is5_A Calcium-dependent prote 100.0 3.1E-37 1E-41 333.9 23.3 252 688-959 21-278 (285)
203 2a19_B Interferon-induced, dou 100.0 1.3E-37 4.4E-42 336.9 20.2 245 687-962 9-270 (284)
204 3pfq_A PKC-B, PKC-beta, protei 100.0 1.7E-37 6E-42 373.4 23.1 250 687-958 339-596 (674)
205 3g2f_A Bone morphogenetic prot 100.0 1.2E-37 4E-42 346.0 20.0 264 688-962 12-314 (336)
206 1cm8_A Phosphorylated MAP kina 100.0 2.3E-37 7.8E-42 346.8 22.4 250 689-959 25-307 (367)
207 3ttj_A Mitogen-activated prote 100.0 1.9E-37 6.5E-42 357.6 22.3 261 688-959 61-355 (464)
208 2jam_A Calcium/calmodulin-depe 100.0 2.6E-37 8.7E-42 338.0 22.1 250 688-959 8-261 (304)
209 2ozo_A Tyrosine-protein kinase 100.0 1.3E-37 4.4E-42 371.2 21.5 250 691-962 337-594 (613)
210 1t4h_A Serine/threonine-protei 100.0 7.7E-37 2.6E-41 331.8 25.7 248 690-959 27-282 (290)
211 2vgo_A Serine/threonine-protei 100.0 2.5E-37 8.5E-42 334.6 21.6 248 688-959 13-262 (284)
212 3eqc_A Dual specificity mitoge 100.0 1.2E-37 4.1E-42 349.3 19.5 261 688-959 32-324 (360)
213 1ua2_A CAK, cell division prot 100.0 1.6E-37 5.4E-42 346.0 20.2 258 686-959 7-291 (346)
214 2yfx_A Tyrosine-protein kinase 100.0 1.2E-37 4.2E-42 344.3 19.0 255 688-962 29-300 (327)
215 2clq_A Mitogen-activated prote 100.0 4.3E-37 1.5E-41 334.8 22.7 251 690-959 23-278 (295)
216 4fl3_A Tyrosine-protein kinase 100.0 1.4E-37 4.7E-42 371.7 20.5 246 695-962 375-627 (635)
217 1fvr_A Tyrosine-protein kinase 100.0 1.8E-37 6.3E-42 342.9 19.9 254 688-962 24-296 (327)
218 1b6c_B TGF-B superfamily recep 100.0 8.1E-37 2.8E-41 340.2 25.2 261 684-962 37-332 (342)
219 2h6d_A 5'-AMP-activated protei 100.0 3.4E-37 1.2E-41 332.1 21.4 249 688-959 10-261 (276)
220 3nyv_A Calmodulin-domain prote 100.0 2.5E-37 8.6E-42 360.8 21.8 252 688-959 25-281 (484)
221 3mi9_A Cell division protein k 100.0 3.8E-37 1.3E-41 344.0 22.4 258 688-959 16-311 (351)
222 2jii_A Serine/threonine-protei 100.0 3.5E-38 1.2E-42 352.3 13.8 257 689-962 42-332 (352)
223 2w1i_A JAK2; chromosomal rearr 100.0 4.7E-38 1.6E-42 347.4 14.6 265 688-962 40-318 (326)
224 4hgt_A Casein kinase I isoform 100.0 1.2E-37 4E-42 339.4 17.4 258 687-962 7-276 (296)
225 3q5i_A Protein kinase; CDPK, m 100.0 7E-37 2.4E-41 358.4 25.0 252 688-959 35-301 (504)
226 2xir_A Vascular endothelial gr 100.0 8.7E-38 3E-42 343.9 16.2 261 683-962 21-306 (316)
227 3uzp_A CKI-delta, CKID, casein 100.0 1.5E-37 5.1E-42 338.6 17.9 257 688-962 8-276 (296)
228 2wtk_C Serine/threonine-protei 100.0 8.2E-37 2.8E-41 334.3 23.7 252 687-959 3-263 (305)
229 2pml_X PFPK7, Ser/Thr protein 100.0 1.7E-37 5.8E-42 346.6 18.3 256 688-959 30-322 (348)
230 3i6u_A CDS1, serine/threonine- 100.0 3.7E-37 1.3E-41 351.4 21.4 254 687-959 133-399 (419)
231 1vzo_A Ribosomal protein S6 ki 100.0 1E-37 3.5E-42 348.3 16.4 255 688-960 53-322 (355)
232 2buj_A Serine/threonine-protei 100.0 3.6E-37 1.2E-41 339.1 20.2 255 689-962 29-302 (317)
233 3com_A Serine/threonine-protei 100.0 1.3E-36 4.5E-41 334.1 24.5 251 687-959 27-278 (314)
234 2xrw_A Mitogen-activated prote 100.0 1.1E-36 3.8E-41 342.4 24.2 263 688-959 24-318 (371)
235 2x7f_A TRAF2 and NCK-interacti 100.0 3.3E-37 1.1E-41 340.8 19.4 252 687-959 22-286 (326)
236 2wei_A Calmodulin-domain prote 100.0 1.2E-36 4E-41 329.8 23.1 253 687-959 20-276 (287)
237 3fme_A Dual specificity mitoge 100.0 5.8E-37 2E-41 332.9 20.3 254 688-959 6-266 (290)
238 3e7e_A HBUB1, BUB1A, mitotic c 100.0 7.8E-37 2.7E-41 343.2 21.6 246 688-962 64-335 (365)
239 3byv_A Rhoptry kinase; malaria 100.0 1E-37 3.4E-42 351.8 14.2 243 688-959 72-359 (377)
240 2j7t_A Serine/threonine-protei 100.0 4.6E-37 1.6E-41 335.7 18.9 252 688-959 18-275 (302)
241 2fst_X Mitogen-activated prote 100.0 2.7E-37 9.1E-42 345.8 17.2 260 689-959 29-311 (367)
242 1u46_A ACK-1, activated CDC42 100.0 3.4E-37 1.2E-41 334.8 17.5 254 689-962 18-280 (291)
243 3q60_A ROP5B; pseudokinase, tr 100.0 2.7E-37 9.1E-42 347.7 16.6 254 689-959 62-352 (371)
244 3kvw_A DYRK2, dual specificity 100.0 1.7E-36 5.9E-41 346.8 23.5 197 688-894 96-301 (429)
245 1blx_A Cyclin-dependent kinase 100.0 8.3E-37 2.9E-41 337.6 19.8 257 687-959 9-296 (326)
246 3pg1_A Mitogen-activated prote 100.0 7.9E-37 2.7E-41 343.0 19.6 262 681-959 14-316 (362)
247 1phk_A Phosphorylase kinase; g 100.0 1.9E-36 6.5E-41 330.2 22.0 254 687-959 15-283 (298)
248 3eb0_A Putative uncharacterize 100.0 1.5E-36 5.3E-41 342.9 21.7 252 686-959 4-321 (383)
249 2vwi_A Serine/threonine-protei 100.0 3.8E-37 1.3E-41 336.6 15.8 258 687-959 13-287 (303)
250 2y4i_B KSR2, HKSR2, kinase sup 100.0 3E-37 1E-41 340.1 15.0 254 688-963 32-299 (319)
251 3an0_A Dual specificity mitoge 100.0 1.2E-36 4.1E-41 338.4 19.8 253 688-959 50-310 (340)
252 1zy4_A Serine/threonine-protei 100.0 2.3E-36 8E-41 330.2 21.6 250 688-959 5-283 (303)
253 3sv0_A Casein kinase I-like; t 100.0 1.9E-36 6.5E-41 349.0 21.4 256 689-962 7-274 (483)
254 3cek_A Dual specificity protei 100.0 3.3E-36 1.1E-40 330.7 22.3 251 688-959 27-292 (313)
255 2ycf_A Serine/threonine-protei 100.0 1.3E-36 4.6E-41 335.2 19.0 254 687-959 8-274 (322)
256 1z57_A Dual specificity protei 100.0 3.7E-36 1.3E-40 334.3 22.4 252 689-959 14-328 (339)
257 3nsz_A CK II alpha, casein kin 100.0 2.7E-36 9.4E-41 334.1 21.2 257 689-959 36-319 (330)
258 1wak_A Serine/threonine-protei 100.0 2.1E-36 7.3E-41 344.2 20.8 257 689-959 37-391 (397)
259 4exu_A Mitogen-activated prote 100.0 2.4E-36 8.4E-41 339.5 20.8 249 689-959 42-323 (371)
260 4e7w_A Glycogen synthase kinas 100.0 2.8E-36 9.7E-41 341.4 20.4 261 689-959 40-321 (394)
261 2j0j_A Focal adhesion kinase 1 100.0 2.5E-36 8.7E-41 362.1 20.8 253 688-962 389-647 (656)
262 3rgf_A Cyclin-dependent kinase 100.0 1.3E-36 4.3E-41 346.3 17.1 199 689-895 20-239 (405)
263 3ll6_A Cyclin G-associated kin 100.0 3.6E-36 1.2E-40 334.2 20.4 249 689-962 28-304 (337)
264 3qyz_A Mitogen-activated prote 100.0 3.5E-36 1.2E-40 337.7 20.3 253 688-959 26-313 (364)
265 3oja_B Anopheles plasmodium-re 100.0 1E-35 3.5E-40 356.0 24.4 353 25-434 3-360 (597)
266 1j1b_A Glycogen synthase kinas 100.0 7E-36 2.4E-40 341.0 21.8 260 689-959 54-336 (420)
267 2b9h_A MAP kinase FUS3, mitoge 100.0 5.8E-36 2E-40 334.8 20.7 264 688-959 10-305 (353)
268 3coi_A Mitogen-activated prote 100.0 5.6E-36 1.9E-40 334.7 20.4 258 689-959 24-305 (353)
269 2i6l_A Mitogen-activated prote 100.0 6.1E-36 2.1E-40 329.7 20.1 251 689-959 11-305 (320)
270 3fhr_A MAP kinase-activated pr 100.0 3.4E-36 1.2E-40 333.5 17.7 250 688-959 27-287 (336)
271 2vx3_A Dual specificity tyrosi 100.0 1.3E-35 4.6E-40 335.1 22.7 200 687-894 52-260 (382)
272 3o6n_A APL1; leucine-rich repe 100.0 1.2E-35 4.2E-40 336.8 22.0 335 225-602 43-377 (390)
273 3oja_B Anopheles plasmodium-re 100.0 1.3E-35 4.3E-40 355.3 22.4 335 226-603 50-384 (597)
274 3aln_A Dual specificity mitoge 100.0 6.7E-36 2.3E-40 330.4 18.3 255 689-959 22-285 (327)
275 3o6n_A APL1; leucine-rich repe 100.0 3.1E-35 1.1E-39 333.4 24.2 310 82-433 43-353 (390)
276 2dyl_A Dual specificity mitoge 100.0 2.1E-35 7.3E-40 325.1 21.7 253 688-959 24-283 (318)
277 2rio_A Serine/threonine-protei 100.0 1.1E-35 3.9E-40 340.8 20.3 249 690-959 16-295 (434)
278 3e3p_A Protein kinase, putativ 100.0 1.1E-35 3.8E-40 333.5 19.6 259 682-959 16-314 (360)
279 2eu9_A Dual specificity protei 100.0 2.9E-35 9.8E-40 329.4 21.6 252 689-959 19-333 (355)
280 1q8y_A SR protein kinase; tran 100.0 1.6E-35 5.4E-40 334.0 19.4 257 689-959 19-333 (373)
281 3a99_A Proto-oncogene serine/t 100.0 3.3E-36 1.1E-40 331.4 13.1 242 688-959 42-293 (320)
282 2iwi_A Serine/threonine-protei 100.0 8.4E-36 2.9E-40 327.3 15.3 245 685-959 27-283 (312)
283 4fcg_A Uncharacterized protein 100.0 2.5E-36 8.6E-41 332.7 10.2 282 8-312 24-314 (328)
284 3p23_A Serine/threonine-protei 100.0 5E-35 1.7E-39 334.2 20.4 247 689-959 24-283 (432)
285 3qa8_A MGC80376 protein; kinas 100.0 1.3E-35 4.3E-40 348.4 14.3 264 687-957 12-295 (676)
286 3uqc_A Probable conserved tran 100.0 2.4E-34 8.2E-39 310.4 19.6 229 689-962 31-261 (286)
287 4fmz_A Internalin; leucine ric 100.0 6.9E-34 2.4E-38 317.1 23.4 307 223-576 40-346 (347)
288 4fmz_A Internalin; leucine ric 100.0 1.1E-33 3.8E-38 315.4 22.9 306 81-456 41-346 (347)
289 3m2w_A MAP kinase-activated pr 100.0 9.3E-34 3.2E-38 308.8 21.3 231 688-959 16-256 (299)
290 1ogq_A PGIP-2, polygalacturona 100.0 3.9E-34 1.3E-38 313.3 16.2 254 349-604 52-309 (313)
291 2pzi_A Probable serine/threoni 100.0 4.2E-34 1.4E-38 346.7 17.6 236 689-961 80-323 (681)
292 2ft3_A Biglycan; proteoglycan, 100.0 6E-33 2.1E-37 307.2 24.0 281 77-382 47-331 (332)
293 3dzo_A Rhoptry kinase domain; 100.0 7.2E-34 2.4E-38 323.6 14.3 242 689-959 78-363 (413)
294 1xku_A Decorin; proteoglycan, 100.0 8.1E-33 2.8E-37 306.0 22.3 298 46-382 29-330 (330)
295 2ft3_A Biglycan; proteoglycan, 100.0 2.1E-32 7.3E-37 302.8 23.8 287 85-406 34-331 (332)
296 2vuw_A Serine/threonine-protei 100.0 6.5E-34 2.2E-38 315.6 10.6 243 688-958 19-329 (336)
297 1xku_A Decorin; proteoglycan, 100.0 6.1E-32 2.1E-36 298.9 25.0 267 85-384 32-306 (330)
298 1z7x_W Ribonuclease inhibitor; 100.0 3.8E-36 1.3E-40 349.3 -10.3 354 155-528 3-411 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 4.4E-36 1.5E-40 348.8 -11.0 354 179-552 3-411 (461)
300 2z80_A TOLL-like receptor 2, v 100.0 1.9E-31 6.4E-36 297.9 16.4 279 45-337 27-315 (353)
301 2z66_A Variable lymphocyte rec 100.0 7.6E-32 2.6E-36 294.8 11.9 254 46-314 5-263 (306)
302 3ogk_B Coronatine-insensitive 100.0 3.2E-32 1.1E-36 327.0 -1.4 394 177-573 110-548 (592)
303 3ogk_B Coronatine-insensitive 100.0 9.3E-33 3.2E-37 331.6 -6.1 423 81-549 70-548 (592)
304 2z80_A TOLL-like receptor 2, v 100.0 4E-30 1.4E-34 287.1 15.5 275 87-387 34-317 (353)
305 3zyi_A Leucine-rich repeat-con 100.0 3.1E-29 1.1E-33 289.7 19.7 236 76-313 67-304 (452)
306 4fcg_A Uncharacterized protein 100.0 1.3E-28 4.5E-33 270.9 18.9 224 106-333 79-311 (328)
307 1ozn_A Reticulon 4 receptor; N 100.0 3.1E-29 1E-33 271.0 13.5 224 62-289 14-239 (285)
308 1ozn_A Reticulon 4 receptor; N 100.0 6.5E-29 2.2E-33 268.5 16.0 255 87-345 14-270 (285)
309 2z66_A Variable lymphocyte rec 100.0 1.8E-28 6.2E-33 268.0 18.7 248 230-505 10-262 (306)
310 3zyj_A Leucine-rich repeat-con 100.0 2.2E-28 7.5E-33 281.5 19.6 236 76-313 56-293 (440)
311 1wwl_A Monocyte differentiatio 100.0 8.5E-30 2.9E-34 278.9 7.2 244 82-335 41-308 (312)
312 3zyi_A Leucine-rich repeat-con 100.0 8.8E-28 3E-32 277.5 21.7 232 347-580 75-307 (452)
313 1wwl_A Monocyte differentiatio 100.0 3.8E-30 1.3E-34 281.7 1.8 245 60-314 44-311 (312)
314 3g06_A SSPH2 (leucine-rich rep 100.0 1.6E-28 5.6E-33 290.4 14.7 290 28-392 9-305 (622)
315 3zyj_A Leucine-rich repeat-con 100.0 1.2E-27 3.9E-32 275.5 19.6 251 109-387 44-295 (440)
316 2o6q_A Variable lymphocyte rec 99.9 3.2E-27 1.1E-31 252.8 19.3 216 45-264 2-218 (270)
317 3o53_A Protein LRIM1, AGAP0063 99.9 3.5E-29 1.2E-33 274.7 3.7 258 86-356 12-271 (317)
318 3o53_A Protein LRIM1, AGAP0063 99.9 5.9E-29 2E-33 272.9 5.2 268 276-581 11-281 (317)
319 3g06_A SSPH2 (leucine-rich rep 99.9 1.1E-26 3.7E-31 274.9 22.5 268 228-563 41-308 (622)
320 2p1m_B Transport inhibitor res 99.9 2.9E-30 9.8E-35 310.1 -10.8 421 127-575 61-543 (594)
321 4azs_A Methyltransferase WBDD; 99.9 3.6E-28 1.2E-32 285.8 6.8 186 697-891 242-437 (569)
322 2p1m_B Transport inhibitor res 99.9 7.6E-30 2.6E-34 306.4 -9.7 457 47-550 34-542 (594)
323 3oja_A Leucine-rich immune mol 99.9 1.5E-27 5E-32 277.0 7.8 235 84-355 34-270 (487)
324 3oja_A Leucine-rich immune mol 99.9 2.6E-27 8.8E-32 275.0 8.8 235 299-571 34-270 (487)
325 2z62_A TOLL-like receptor 4, v 99.9 7.6E-26 2.6E-30 243.1 17.8 218 77-315 21-240 (276)
326 2z62_A TOLL-like receptor 4, v 99.9 1.8E-25 6.2E-30 240.1 17.8 211 372-583 29-244 (276)
327 3rfs_A Internalin B, repeat mo 99.9 4.2E-26 1.4E-30 244.2 10.8 202 82-288 17-218 (272)
328 2o6q_A Variable lymphocyte rec 99.9 2.3E-24 7.7E-29 230.6 20.0 187 395-581 37-223 (270)
329 1p9a_G Platelet glycoprotein I 99.9 1.9E-24 6.6E-29 233.1 17.7 202 81-288 7-208 (290)
330 3rfs_A Internalin B, repeat mo 99.9 1.5E-24 5.1E-29 232.2 16.7 211 79-300 36-247 (272)
331 3m19_A Variable lymphocyte rec 99.9 2.9E-24 1E-28 227.0 17.4 192 45-242 2-194 (251)
332 1p9a_G Platelet glycoprotein I 99.9 4.1E-24 1.4E-28 230.5 17.1 204 103-313 5-209 (290)
333 4glp_A Monocyte differentiatio 99.9 1.3E-24 4.4E-29 237.6 12.2 223 85-313 65-308 (310)
334 2xwt_C Thyrotropin receptor; s 99.9 7.5E-24 2.6E-28 222.2 14.6 197 82-284 29-235 (239)
335 3en9_A Glycoprotease, O-sialog 99.9 8.9E-25 3E-29 255.6 7.9 185 692-892 339-538 (540)
336 3goz_A Leucine-rich repeat-con 99.9 3.4E-25 1.2E-29 247.8 2.7 251 329-579 4-300 (362)
337 2ast_B S-phase kinase-associat 99.9 1.6E-25 5.6E-30 248.1 -3.0 266 47-345 36-315 (336)
338 3goz_A Leucine-rich repeat-con 99.9 1.3E-24 4.4E-29 243.1 2.8 261 159-439 2-304 (362)
339 1h6u_A Internalin H; cell adhe 99.9 2.1E-23 7.1E-28 227.4 11.9 212 85-313 20-231 (308)
340 2o6s_A Variable lymphocyte rec 99.9 8.2E-23 2.8E-27 209.3 15.2 184 46-251 5-189 (208)
341 4glp_A Monocyte differentiatio 99.9 1.8E-23 6.3E-28 228.4 10.1 201 83-289 90-308 (310)
342 3m19_A Variable lymphocyte rec 99.9 1.6E-22 5.5E-27 213.7 16.9 183 396-581 15-197 (251)
343 2ca6_A RAN GTPase-activating p 99.9 1.8E-25 6.1E-30 252.7 -6.5 244 99-362 23-318 (386)
344 2xwt_C Thyrotropin receptor; s 99.9 5.4E-23 1.9E-27 215.6 12.6 198 156-380 32-235 (239)
345 1h6u_A Internalin H; cell adhe 99.9 1E-22 3.5E-27 221.8 15.1 199 79-293 36-234 (308)
346 2ast_B S-phase kinase-associat 99.9 1.3E-24 4.5E-29 240.8 -0.1 221 110-333 49-282 (336)
347 2ca6_A RAN GTPase-activating p 99.9 1.6E-24 5.5E-29 244.9 -0.4 241 340-580 25-320 (386)
348 4ay9_X Follicle-stimulating ho 99.9 2.3E-22 7.7E-27 223.6 16.1 242 48-309 9-256 (350)
349 3cvr_A Invasion plasmid antige 99.9 8.7E-23 3E-27 238.4 8.9 205 49-299 49-254 (571)
350 4ay9_X Follicle-stimulating ho 99.9 1.8E-21 6E-26 216.4 15.9 241 88-336 13-259 (350)
351 2o6s_A Variable lymphocyte rec 99.8 5.6E-21 1.9E-25 195.6 15.5 180 87-276 10-190 (208)
352 3cvr_A Invasion plasmid antige 99.8 2.1E-21 7.1E-26 226.7 13.7 188 109-323 60-254 (571)
353 1zar_A RIO2 kinase; serine kin 99.8 8.9E-22 3E-26 210.8 9.3 148 688-865 89-252 (282)
354 4b8c_D Glucose-repressible alc 99.8 5.8E-22 2E-26 240.4 4.2 216 12-244 133-358 (727)
355 1m9s_A Internalin B; cell inva 99.8 6.3E-21 2.2E-25 225.4 11.5 195 82-291 19-213 (605)
356 1h6t_A Internalin B; cell adhe 99.8 4.6E-21 1.6E-25 206.9 9.0 191 83-288 23-213 (291)
357 2v70_A SLIT-2, SLIT homolog 2 99.8 1.4E-20 4.6E-25 194.1 10.2 156 422-580 14-170 (220)
358 3e6j_A Variable lymphocyte rec 99.8 8E-20 2.7E-24 189.7 15.6 159 45-242 16-174 (229)
359 2v9t_B SLIT homolog 2 protein 99.8 2.4E-20 8.2E-25 192.3 10.3 155 422-579 14-168 (220)
360 1h6t_A Internalin B; cell adhe 99.8 4.2E-20 1.4E-24 199.3 12.5 174 79-265 41-214 (291)
361 2xot_A Amphoterin-induced prot 99.8 7E-20 2.4E-24 204.3 12.2 178 399-579 22-205 (361)
362 1m9s_A Internalin B; cell inva 99.8 1.2E-19 4.1E-24 214.4 14.8 185 79-276 38-222 (605)
363 2v9t_B SLIT homolog 2 protein 99.8 2.6E-19 8.8E-24 184.5 14.3 155 47-216 10-165 (220)
364 3e6j_A Variable lymphocyte rec 99.8 3.1E-19 1.1E-23 185.2 13.9 157 421-581 21-177 (229)
365 2xot_A Amphoterin-induced prot 99.8 2.7E-19 9.4E-24 199.5 13.3 117 77-193 32-150 (361)
366 2v70_A SLIT-2, SLIT homolog 2 99.8 2.7E-19 9.4E-24 184.3 12.3 150 88-240 15-166 (220)
367 1xeu_A Internalin C; cellular 99.8 8.2E-20 2.8E-24 193.8 7.6 171 80-264 15-185 (263)
368 1dce_A Protein (RAB geranylger 99.8 5.1E-21 1.8E-25 224.9 -4.4 179 81-265 346-547 (567)
369 1xeu_A Internalin C; cellular 99.8 1.7E-19 5.7E-24 191.4 6.9 177 98-290 11-187 (263)
370 4ezg_A Putative uncharacterize 99.8 1.1E-18 3.8E-23 176.7 9.4 132 151-288 62-194 (197)
371 4ezg_A Putative uncharacterize 99.8 3.6E-18 1.2E-22 172.9 12.9 155 415-577 40-195 (197)
372 4b8c_D Glucose-repressible alc 99.8 2.3E-19 8E-24 217.6 4.9 191 84-285 173-369 (727)
373 3sb4_A Hypothetical leucine ri 99.7 2E-18 7E-23 189.9 10.3 221 346-570 100-328 (329)
374 1w8a_A SLIT protein; signaling 99.7 2.2E-18 7.6E-23 173.5 7.8 131 422-555 11-142 (192)
375 1dce_A Protein (RAB geranylger 99.7 2.4E-19 8.1E-24 210.7 -0.9 203 201-450 347-567 (567)
376 3sb4_A Hypothetical leucine ri 99.7 1.7E-18 5.9E-23 190.6 5.3 103 346-450 225-328 (329)
377 1w8a_A SLIT protein; signaling 99.7 8.8E-18 3E-22 169.1 9.8 129 398-529 11-140 (192)
378 1zth_A RIO1 serine protein kin 99.7 1.2E-17 4.2E-22 176.5 10.3 139 690-842 48-219 (258)
379 2wfh_A SLIT homolog 2 protein 99.7 6.8E-17 2.3E-21 162.5 7.9 111 468-579 32-142 (193)
380 2ell_A Acidic leucine-rich nuc 99.7 7.2E-17 2.4E-21 158.8 7.7 43 222-264 115-160 (168)
381 2ell_A Acidic leucine-rich nuc 99.7 1.9E-16 6.4E-21 155.8 9.6 133 154-288 23-160 (168)
382 2o6r_A Variable lymphocyte rec 99.7 5.6E-16 1.9E-20 153.8 13.0 133 47-194 6-139 (177)
383 4fdw_A Leucine rich hypothetic 99.6 2.5E-15 8.5E-20 168.7 19.4 219 349-576 159-383 (401)
384 2je0_A Acidic leucine-rich nuc 99.6 1E-16 3.5E-21 154.2 4.9 58 202-259 87-148 (149)
385 2o6r_A Variable lymphocyte rec 99.6 5.8E-16 2E-20 153.6 10.2 133 446-581 10-142 (177)
386 4fdw_A Leucine rich hypothetic 99.6 3.5E-15 1.2E-19 167.5 17.3 219 325-552 159-383 (401)
387 2je0_A Acidic leucine-rich nuc 99.6 2.6E-16 9E-21 151.3 7.0 128 154-283 16-148 (149)
388 2wfh_A SLIT homolog 2 protein 99.6 1.3E-15 4.6E-20 153.0 11.6 126 88-240 14-139 (193)
389 4gyi_A RIO2 kinase; protein ki 99.6 4.8E-16 1.6E-20 169.8 5.5 139 690-843 96-266 (397)
390 1ds9_A Outer arm dynein; leuci 99.6 5.6E-17 1.9E-21 164.2 -3.3 152 419-577 18-186 (198)
391 4fs7_A Uncharacterized protein 99.6 4.8E-14 1.6E-18 159.1 20.4 330 196-568 64-393 (394)
392 1a9n_A U2A', U2A'; complex (nu 99.5 3.3E-15 1.1E-19 148.0 6.9 133 439-577 15-154 (176)
393 4fs7_A Uncharacterized protein 99.5 1.2E-13 4E-18 155.9 20.5 236 246-519 157-392 (394)
394 1ds9_A Outer arm dynein; leuci 99.5 1.9E-16 6.6E-21 160.2 -2.8 153 394-553 17-186 (198)
395 1a9n_A U2A', U2A'; complex (nu 99.5 3.1E-15 1.1E-19 148.1 5.6 134 104-264 15-153 (176)
396 3g39_A Variable lymphocyte rec 99.5 4.8E-14 1.6E-18 138.4 9.1 110 469-581 11-120 (170)
397 2r9u_A Variable lymphocyte rec 99.4 1.3E-13 4.5E-18 135.8 9.2 108 470-580 15-122 (174)
398 3g39_A Variable lymphocyte rec 99.4 4.7E-13 1.6E-17 131.3 10.9 86 155-240 30-115 (170)
399 2r9u_A Variable lymphocyte rec 99.4 5.2E-13 1.8E-17 131.5 10.3 85 156-240 34-118 (174)
400 3un9_A NLR family member X1; l 99.3 4.7E-14 1.6E-18 156.8 -2.4 160 419-578 72-254 (372)
401 3un9_A NLR family member X1; l 99.3 2.1E-14 7.1E-19 159.6 -6.0 173 370-562 71-262 (372)
402 4gt6_A Cell surface protein; l 99.3 3.5E-11 1.2E-15 135.6 20.4 331 196-575 56-390 (394)
403 4gt6_A Cell surface protein; l 99.3 7.6E-11 2.6E-15 132.8 22.8 323 156-503 65-390 (394)
404 2ifg_A High affinity nerve gro 99.2 9.9E-12 3.4E-16 137.6 8.8 103 447-552 12-116 (347)
405 2ifg_A High affinity nerve gro 99.2 1.8E-11 6.3E-16 135.4 9.3 101 112-215 12-115 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 5.2E-11 1.8E-15 126.1 11.5 146 685-840 10-212 (263)
407 4h09_A Hypothetical leucine ri 99.1 3.9E-09 1.3E-13 118.2 20.6 146 341-491 211-356 (379)
408 4h09_A Hypothetical leucine ri 99.0 9.1E-09 3.1E-13 115.1 21.5 303 222-562 41-355 (379)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 3.2E-10 1.1E-14 119.8 7.8 136 690-840 21-213 (264)
410 2ra8_A Uncharacterized protein 98.9 1.4E-10 4.7E-15 127.6 1.1 85 225-310 250-341 (362)
411 2ra8_A Uncharacterized protein 98.9 3.3E-10 1.1E-14 124.5 3.6 131 442-574 192-341 (362)
412 3dxp_A Putative acyl-COA dehyd 98.9 4.9E-09 1.7E-13 116.3 11.0 143 693-841 42-248 (359)
413 3rw6_A Nuclear RNA export fact 98.8 2.7E-10 9.2E-15 118.6 -2.5 159 47-209 77-257 (267)
414 3sg8_A APH(2'')-ID; antibiotic 98.8 3.7E-09 1.3E-13 114.3 5.4 185 694-892 25-287 (304)
415 3r70_A Aminoglycoside phosphot 98.6 2.5E-07 8.6E-12 100.6 13.5 138 690-843 38-239 (320)
416 1io0_A Tropomodulin; LRR prote 98.5 1.5E-08 5E-13 100.5 0.8 119 438-576 31-164 (185)
417 1io0_A Tropomodulin; LRR prote 98.5 1.5E-08 5E-13 100.5 -0.0 115 414-528 31-164 (185)
418 3rw6_A Nuclear RNA export fact 98.4 2.4E-08 8.2E-13 103.8 0.1 65 514-580 169-237 (267)
419 3d1u_A Putative fructosamine-3 98.3 2.2E-06 7.6E-11 91.1 10.1 77 692-774 18-97 (288)
420 4gkh_A Aminoglycoside 3'-phosp 98.3 5.9E-06 2E-10 87.3 13.3 134 696-840 31-222 (272)
421 3tdw_A Gentamicin resistance p 98.2 7.7E-06 2.6E-10 88.0 13.2 137 694-842 24-225 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 1.6E-05 5.6E-10 87.5 12.3 144 691-842 43-244 (362)
423 3ats_A Putative uncharacterize 97.9 9.4E-06 3.2E-10 89.6 6.3 82 694-775 25-121 (357)
424 3e4g_A ATP synthase subunit S, 97.9 2.8E-06 9.7E-11 81.7 1.2 81 469-549 63-149 (176)
425 3e4g_A ATP synthase subunit S, 97.8 6.1E-06 2.1E-10 79.4 1.7 88 419-526 61-150 (176)
426 2q83_A YTAA protein; 2635576, 97.6 0.00017 5.8E-09 78.9 11.3 139 695-840 38-251 (346)
427 3jr1_A Putative fructosamine-3 97.6 0.0003 1E-08 75.2 12.3 138 693-837 40-232 (312)
428 2olc_A MTR kinase, methylthior 97.6 0.00014 4.7E-09 81.5 10.1 77 694-772 35-120 (397)
429 1pgv_A TMD-1, tropomodulin TMD 97.5 2.1E-05 7.3E-10 77.1 1.6 15 560-574 154-168 (197)
430 1pgv_A TMD-1, tropomodulin TMD 97.5 2.9E-05 9.9E-10 76.1 2.2 64 418-481 40-112 (197)
431 2pyw_A Uncharacterized protein 97.3 0.00082 2.8E-08 75.7 11.9 78 810-889 231-313 (420)
432 3f7w_A Putative fructosamine-3 97.3 0.00035 1.2E-08 74.2 8.4 79 690-774 16-97 (288)
433 3csv_A Aminoglycoside phosphot 97.0 0.0014 4.8E-08 71.2 9.0 142 695-843 24-219 (333)
434 3rfe_A Platelet glycoprotein I 97.0 0.0007 2.4E-08 62.0 5.4 58 519-578 12-70 (130)
435 1zyl_A Hypothetical protein YI 96.9 0.015 5E-07 62.8 15.6 157 679-841 11-223 (328)
436 2ppq_A HSK, HK, homoserine kin 96.8 0.0097 3.3E-07 64.0 13.9 157 679-840 7-216 (322)
437 3dxq_A Choline/ethanolamine ki 96.8 0.0088 3E-07 63.7 12.7 138 693-841 22-202 (301)
438 3feg_A Choline/ethanolamine ki 96.6 0.0038 1.3E-07 68.5 8.9 140 694-840 55-253 (379)
439 3rfe_A Platelet glycoprotein I 96.6 0.0016 5.4E-08 59.6 4.3 56 495-552 12-68 (130)
440 1nw1_A Choline kinase (49.2 KD 96.5 0.005 1.7E-07 69.1 8.9 72 694-773 78-158 (429)
441 2qg7_A Ethanolamine kinase PV0 96.3 0.014 4.6E-07 65.9 10.6 74 694-774 113-188 (458)
442 3i1a_A Spectinomycin phosphotr 96.0 0.04 1.4E-06 59.7 12.3 32 810-841 205-236 (339)
443 2yle_A Protein spire homolog 1 95.6 0.062 2.1E-06 52.8 10.3 100 773-889 34-133 (229)
444 3c5i_A Choline kinase; choline 95.5 0.039 1.3E-06 60.6 9.8 74 694-774 38-121 (369)
445 3f2s_A CK, chetk-alpha, cholin 95.1 0.044 1.5E-06 60.2 8.6 143 694-840 57-279 (401)
446 3mes_A Choline kinase; malaria 94.8 0.11 3.8E-06 57.6 11.0 140 694-841 75-291 (424)
447 3g15_A CK, chetk-alpha, cholin 89.5 0.94 3.2E-05 50.0 9.4 30 812-841 245-280 (401)
448 4ann_A ESSB; membrane protein, 83.7 2.7 9.4E-05 41.1 7.9 124 737-894 36-159 (215)
449 3cxl_A N-chimerin; SH2, RHO-GA 82.1 0.17 5.8E-06 57.1 -1.7 62 693-757 146-214 (463)
450 4ano_A ESSB; membrane protein, 74.9 8 0.00027 38.0 8.0 116 745-895 48-165 (219)
451 2jwa_A Receptor tyrosine-prote 54.7 3.1 0.00011 28.9 0.4 8 645-652 31-38 (44)
452 2lz0_A Uncharacterized protein 43.0 52 0.0018 27.6 6.4 41 362-403 11-51 (100)
453 2k9y_A Ephrin type-A receptor 42.4 13 0.00043 25.5 2.0 12 629-640 16-27 (41)
454 1cja_A Protein (actin-fragmin 41.0 1.1E+02 0.0037 32.0 9.5 140 691-841 71-237 (342)
455 2lz0_A Uncharacterized protein 37.2 65 0.0022 27.0 6.1 44 337-381 10-53 (100)
456 2l2t_A Receptor tyrosine-prote 35.0 11 0.00037 26.3 0.6 10 645-654 33-42 (44)
457 3ls8_A Phosphatidylinositol 3- 21.2 4.2E+02 0.014 30.2 10.8 46 788-840 454-501 (614)
458 3eps_A Isocitrate dehydrogenas 20.9 9E+02 0.031 26.9 15.5 152 681-843 298-483 (578)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=9.9e-84 Score=794.52 Aligned_cols=598 Identities=33% Similarity=0.545 Sum_probs=489.5
Q ss_pred CccccCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCceeeceEeCCCCCeeEEecCCCCCCCc---cCC
Q 037111 1 FSLNVASNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCNHAGRIISINLTSTSLKGT---LDQ 77 (964)
Q Consensus 1 ~~~~~~~~~~~~~~all~~k~~~~~~~~~~l~sW~~~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~---l~~ 77 (964)
|.+..+.+..+|++|||+||+++. ||. .++||.. .+|||.|.||+|+ .+||++++|++.++.|. +++
T Consensus 2 ~~~~~~~~~~~~~~all~~k~~~~-~~~-~l~~W~~-------~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~ 71 (768)
T 3rgz_A 2 FQASPSQSLYREIHQLISFKDVLP-DKN-LLPDWSS-------NKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSS 71 (768)
T ss_dssp ------CCHHHHHHHHHHHHTTCS-CTT-SSTTCCT-------TSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHH
T ss_pred CcCccccCCHHHHHHHHHHHhhCC-Ccc-cccCCCC-------CCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccCh
Confidence 344445555569999999999998 566 8999973 3689999999999 79999999999999886 332
Q ss_pred ----------------------CccCcCcceeEEeccCCccccCCCc--cccCCCCcCeeecccCCccCcCCccc-CCCC
Q 037111 78 ----------------------FPFSLFSHLSYLDLNENQLYGNIPS--PIGNLTKLKFLNLSSNHFSGKIPSEI-GLLT 132 (964)
Q Consensus 78 ----------------------~~~~~~~~L~~L~l~~n~l~~~~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~~-~~l~ 132 (964)
..++.+++|++|||++|.++|.+|. .|+++++|++|+|++|.+++.+|..+ +.++
T Consensus 72 ~l~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~ 151 (768)
T 3rgz_A 72 SLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLN 151 (768)
T ss_dssp HTTTCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCT
T ss_pred hHhccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCC
Confidence 2466788999999999999998888 89999999999999999988888765 5666
Q ss_pred cccEEEccccccCCcccc--------------------------cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEE
Q 037111 133 NLEVLHMFVNHLNGSIPE--------------------------IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYL 186 (964)
Q Consensus 133 ~L~~L~l~~n~l~~~~~~--------------------------~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 186 (964)
+|++|+|++|++++.+|. ++.+++|++|+|++|++++.+|. ++++++|++|+|
T Consensus 152 ~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~L 230 (768)
T 3rgz_A 152 SLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDI 230 (768)
T ss_dssp TCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEEC
T ss_pred CCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEEC
Confidence 666666666655543321 24567777777777777776666 777777777777
Q ss_pred ecCCCCCCCCccccCCCCcchhhcccccccC----------------------CccccccCc-cccceeeccccccCCCC
Q 037111 187 YNNSLPGSIPSSIGNLSNLVYLFLKKNHLRG----------------------PIPSSFGYL-RKLTKLELSNNQLSGSI 243 (964)
Q Consensus 187 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~----------------------~~~~~~~~l-~~L~~L~L~~N~l~~~~ 243 (964)
++|++++.+|..++++++|++|+|++|++++ .+|..+... ++|++|+|++|++++.+
T Consensus 231 s~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~ 310 (768)
T 3rgz_A 231 SGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAV 310 (768)
T ss_dssp CSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECC
T ss_pred cCCcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCcc
Confidence 7777777777777777766666666666654 444444443 66666666666666666
Q ss_pred hhhhhcccccceeeccccccccccCCc-ccCccccceeecccccccccCCcccccCc-cccEEEeeCccCcccCCccccc
Q 037111 244 PQEIGNLKLLTDLSLSQNQLRGTVPSS-LSNLSSLEILHLYDNQLSGHIPQEIGNFM-NLNSLSVGGNQFTGFLPQNICQ 321 (964)
Q Consensus 244 p~~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~ 321 (964)
|..|+.+++|++|+|++|+++|.+|.. +..+++|++|++++|++++.+|..+..++ +|+.|++++|++++..|..++.
T Consensus 311 p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~ 390 (768)
T 3rgz_A 311 PPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQ 390 (768)
T ss_dssp CGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTC
T ss_pred chHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhh
Confidence 666666666666666666666666644 66666666777766666666666666665 6777777777777666666665
Q ss_pred --CCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccce
Q 037111 322 --SGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGI 399 (964)
Q Consensus 322 --~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~ 399 (964)
+++|++|++++|.+.+.+|..+.++++|+.|++++|.+++..+..|..+++|+.|++++|++.+..+..+..+++|+.
T Consensus 391 ~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 470 (768)
T 3rgz_A 391 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 470 (768)
T ss_dssp STTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred cccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceE
Confidence 677888888888888888889999999999999999999988899999999999999999999988989999999999
Q ss_pred EeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCcc
Q 037111 400 LKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRF 479 (964)
Q Consensus 400 L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 479 (964)
|++++|.+++.+|..+.++++|++|+|++|++++.+|.+++.+++|++|+|++|++++.+|..++.+++|++|+|++|++
T Consensus 471 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 550 (768)
T 3rgz_A 471 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF 550 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEE
T ss_pred EEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccccCCC----------------------------------------------------------------------ccc
Q 037111 480 SKSIPGN----------------------------------------------------------------------MGY 489 (964)
Q Consensus 480 ~~~~~~~----------------------------------------------------------------------~~~ 489 (964)
++.+|.. +..
T Consensus 551 ~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~ 630 (768)
T 3rgz_A 551 NGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDN 630 (768)
T ss_dssp ESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSS
T ss_pred CCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhc
Confidence 8766643 344
Q ss_pred ccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEE
Q 037111 490 LLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSID 569 (964)
Q Consensus 490 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ 569 (964)
+++|++|||++|++++.+|..++.+++|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..|.++++|+.||
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcccccCCCCccCCCCCcccccCCCCccCCCCCCccccc
Q 037111 570 ISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVSGLQPCKA 611 (964)
Q Consensus 570 ls~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~l~~~~~ 611 (964)
+|+|+++|.||...+|.+++..+|.|||++||.+. .+|..
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l--~~C~~ 750 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL--PRCDP 750 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS--CCCCS
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCCCC--cCCCC
Confidence 99999999999999999999999999999999864 37753
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.6e-64 Score=619.19 Aligned_cols=510 Identities=32% Similarity=0.442 Sum_probs=408.8
Q ss_pred cceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCc--ccCCCCcccEEEccccccCCcccc-c-CCCCCCCE
Q 037111 84 SHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPS--EIGLLTNLEVLHMFVNHLNGSIPE-I-GHLSSLKN 159 (964)
Q Consensus 84 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~--~~~~l~~L~~L~l~~n~l~~~~~~-~-~~l~~L~~ 159 (964)
++|+.++++.|.+. .+|+.|+++++|++|+|++|.++|.+|. .++.+++|++|+|++|.+++.+|. + ..+++|++
T Consensus 77 ~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 155 (768)
T 3rgz_A 77 TGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEV 155 (768)
T ss_dssp TTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSE
T ss_pred CcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCE
Confidence 34444444444443 2558999999999999999999999999 999999999999999999988875 3 78999999
Q ss_pred EEcCCCCCCCCCCCC-------------------------CCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhccccc
Q 037111 160 LALDGNHLDGPIPVS-------------------------IGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNH 214 (964)
Q Consensus 160 L~L~~n~l~~~~p~~-------------------------~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 214 (964)
|+|++|++++..|.. ++++++|++|+|++|++++.+|. ++++++|++|+|++|.
T Consensus 156 L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~ 234 (768)
T 3rgz_A 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNK 234 (768)
T ss_dssp EECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSC
T ss_pred EECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCc
Confidence 999999998765543 25788899999999999988887 9999999999999999
Q ss_pred ccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCc-cccceeecccccccccCCc
Q 037111 215 LRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNL-SSLEILHLYDNQLSGHIPQ 293 (964)
Q Consensus 215 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~~~ 293 (964)
+++.+|..|+.+++|++|+|++|++++.+|.. .+++|++|+|++|++++.+|..+... ++|++|+|++|++++.+|.
T Consensus 235 l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~ 312 (768)
T 3rgz_A 235 LSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPP 312 (768)
T ss_dssp CCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCG
T ss_pred CCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccch
Confidence 99999999999999999999999887665543 55566666666666655555555443 5555555555555555555
Q ss_pred ccccCccccEEEeeCccCcccCCcc-cccCCcceEEEeecccc-------------------------cccccccccC--
Q 037111 294 EIGNFMNLNSLSVGGNQFTGFLPQN-ICQSGSLQYFSVHDNYF-------------------------IGSLPKTLRN-- 345 (964)
Q Consensus 294 ~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~L~~L~l~~n~l-------------------------~~~~p~~l~~-- 345 (964)
.|+.+++|+.|++++|++++.+|.. +..+++|++|++++|.+ .+.+|..+..
T Consensus 313 ~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~ 392 (768)
T 3rgz_A 313 FFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNP 392 (768)
T ss_dssp GGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCST
T ss_pred HHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcc
Confidence 5555555555555555555444433 44445555555555544 4444444444
Q ss_pred CCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEe
Q 037111 346 CTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELD 425 (964)
Q Consensus 346 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 425 (964)
+++|+.|++++|.+++..+..+..+++|+.|+|++|++++..+..+..+++|+.|++++|.+++.+|..+..+++|++|+
T Consensus 393 ~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 472 (768)
T 3rgz_A 393 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 472 (768)
T ss_dssp TCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE
T ss_pred cCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEE
Confidence 55677777777777777778888888899999999999888888888899999999999999988898999999999999
Q ss_pred ccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCc
Q 037111 426 FSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQ 505 (964)
Q Consensus 426 Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 505 (964)
|++|++++.+|..+.++++|++|+|++|++++.+|.+++.+++|++|+|++|++++.+|..++.+++|++|++++|++++
T Consensus 473 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 552 (768)
T 3rgz_A 473 LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNG 552 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEES
T ss_pred ecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCC
Confidence 99999998899999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cchhhhh----------------------------------------------------------------------ccc
Q 037111 506 EIPIQLG----------------------------------------------------------------------KLV 515 (964)
Q Consensus 506 ~~~~~~~----------------------------------------------------------------------~l~ 515 (964)
.+|..+. .++
T Consensus 553 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~ 632 (768)
T 3rgz_A 553 TIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNG 632 (768)
T ss_dssp BCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSB
T ss_pred cCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccc
Confidence 7775443 346
Q ss_pred cCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCCC-ccCCCCCccccc
Q 037111 516 QLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSI-EAFRHAPVEALQ 594 (964)
Q Consensus 516 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~-~~~~~~~~~~~~ 594 (964)
+|+.|||++|+++|.+|..|+++++|+.|+|++|+++|.+|..|+++++|+.||||+|+++|.+|.. ..+..+....+.
T Consensus 633 ~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls 712 (768)
T 3rgz_A 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLS 712 (768)
T ss_dssp CCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECC
T ss_pred cccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECc
Confidence 7889999999999999999999999999999999999999999999999999999999999999863 234445555566
Q ss_pred CCC
Q 037111 595 GNK 597 (964)
Q Consensus 595 ~n~ 597 (964)
.|+
T Consensus 713 ~N~ 715 (768)
T 3rgz_A 713 NNN 715 (768)
T ss_dssp SSE
T ss_pred CCc
Confidence 665
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=8.8e-61 Score=584.95 Aligned_cols=554 Identities=24% Similarity=0.248 Sum_probs=434.6
Q ss_pred ceeeceEeCC----------CCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeeccc
Q 037111 48 CTWSGISCNH----------AGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSS 117 (964)
Q Consensus 48 C~w~gv~C~~----------~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~ 117 (964)
|.+..|.|+. ..+++.++|+++.+++. ++..+..+++|++|+|++|.+++..|..|+++++|++|+|++
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 82 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRL-PAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH 82 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCC-CGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCc-CHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCC
Confidence 4555566642 14677888888877753 222466778888888888888887788888888888888888
Q ss_pred CCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCC
Q 037111 118 NHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIP 196 (964)
Q Consensus 118 n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 196 (964)
|.+++..+..|+.+++|++|+|++|++++.+|. ++.+++|++|+|++|.+++..|..++++++|++|++++|++++..+
T Consensus 83 n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 162 (680)
T 1ziw_A 83 NELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKS 162 (680)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCH
T ss_pred CccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCH
Confidence 888854444688888888888888888877664 7888888888888888888778888888888888888888887666
Q ss_pred cccc--CCCCcchhhcccccccCCccccccCcc---------------------------ccceeeccccccCCCChhhh
Q 037111 197 SSIG--NLSNLVYLFLKKNHLRGPIPSSFGYLR---------------------------KLTKLELSNNQLSGSIPQEI 247 (964)
Q Consensus 197 ~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~---------------------------~L~~L~L~~N~l~~~~p~~~ 247 (964)
..+. .+++|++|++++|.+++..|..|..+. +|+.|++++|.+++..|..+
T Consensus 163 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~ 242 (680)
T 1ziw_A 163 EELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTF 242 (680)
T ss_dssp HHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTT
T ss_pred HHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHh
Confidence 6544 457888888888888877777666543 45666666666666666667
Q ss_pred hcccc--cceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcc-----cCC----
Q 037111 248 GNLKL--LTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTG-----FLP---- 316 (964)
Q Consensus 248 ~~l~~--L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-----~~p---- 316 (964)
..++. |+.|+|++|++++..|..+..+++|++|++++|++++..|..|..+++|+.|++++|...+ .+|
T Consensus 243 ~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~ 322 (680)
T 1ziw_A 243 LGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDD 322 (680)
T ss_dssp GGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECT
T ss_pred hccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccCh
Confidence 66654 7777777777776666677777777777777777777777777777777777777665442 122
Q ss_pred cccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccc--cccCcccCCC--CCCcEEEccCCeeccccCcccc
Q 037111 317 QNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLI--GNISDDFGIY--PNLKLFDLSYNKFYGELSSNWW 392 (964)
Q Consensus 317 ~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~~~~~~~l--~~L~~L~Ls~N~i~~~~~~~~~ 392 (964)
..+..+++|++|++++|.+.+..+..|.++++|+.|++++|.+. ......|..+ ++|+.|++++|++++..+..+.
T Consensus 323 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~ 402 (680)
T 1ziw_A 323 FSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFS 402 (680)
T ss_dssp TTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTT
T ss_pred hhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhh
Confidence 25666777788888888777777777777888888888877643 2333344433 4788888888888888888888
Q ss_pred CCCccceEeecccccCCCCC-CCCcccccCcEEeccCCcccccCCccccccCCcceeeccccccc--CCCchhhhccCCC
Q 037111 393 NCPQLGILKIAGNNITGGIP-PEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLS--GGIPPELGLLTDL 469 (964)
Q Consensus 393 ~~~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L 469 (964)
.+++|+.|++++|.+++.++ ..+.++++|++|++++|++.+..+..|..+++|+.|++++|.+. +..|..+..+++|
T Consensus 403 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L 482 (680)
T 1ziw_A 403 WLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNL 482 (680)
T ss_dssp TCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTC
T ss_pred CCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCC
Confidence 89999999999999876554 67888899999999999998888888999999999999999887 5788899999999
Q ss_pred CceecccCccccccCCCcccccccceecCCccccCccch--------hhhhccccCCeecccCccccCCCChhccccccc
Q 037111 470 GYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIP--------IQLGKLVQLSELDLSHNLLRGEIPPEICNLESL 541 (964)
Q Consensus 470 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 541 (964)
++|+|++|++++..+..|..+++|++|+|++|++++..+ ..|..+++|+.|+|++|+++...+..|.++++|
T Consensus 483 ~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L 562 (680)
T 1ziw_A 483 TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFEL 562 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCc
Confidence 999999999998888889999999999999999986532 237889999999999999995555679999999
Q ss_pred ceeeccCCcCCCcccccccccccceEEEecCCcccccCCCCc--cCCCCCcccccCCCCccCC
Q 037111 542 EKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIE--AFRHAPVEALQGNKGLCGE 602 (964)
Q Consensus 542 ~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~--~~~~~~~~~~~~n~~~c~~ 602 (964)
+.|+|++|+|++..+..|..+++|+.|++++|++++.+|..- .++.+....+.+|||.|+.
T Consensus 563 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 563 KIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCC
T ss_pred ceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCC
Confidence 999999999998888889999999999999999999776532 4677778889999999974
No 4
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.1e-59 Score=567.32 Aligned_cols=501 Identities=21% Similarity=0.200 Sum_probs=425.3
Q ss_pred CCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCC
Q 037111 77 QFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLS 155 (964)
Q Consensus 77 ~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~ 155 (964)
.+|-...+++++|||++|.+++..|..|+++++|++|+|++|.+++..|..|+.+++|++|+|++|++++..|. ++.++
T Consensus 26 ~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 105 (606)
T 3t6q_A 26 EIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPK 105 (606)
T ss_dssp SCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCT
T ss_pred cCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccc
Confidence 55666677899999999999988899999999999999999999988899999999999999999999988774 89999
Q ss_pred CCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccc--eee
Q 037111 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT--KLE 233 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~--~L~ 233 (964)
+|++|+|++|++++..|..++++++|++|++++|++++..+..+..+++|++|+|++|.+++..|..|+.+++|+ .|+
T Consensus 106 ~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~ 185 (606)
T 3t6q_A 106 ALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLN 185 (606)
T ss_dssp TCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEE
T ss_pred cccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEe
Confidence 999999999999987788899999999999999999975545555699999999999999988899999999999 899
Q ss_pred ccccccCCCChhhhhcccccceeeccccccc--------------------------cccCCcccCcc--ccceeecccc
Q 037111 234 LSNNQLSGSIPQEIGNLKLLTDLSLSQNQLR--------------------------GTVPSSLSNLS--SLEILHLYDN 285 (964)
Q Consensus 234 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--------------------------~~~p~~l~~l~--~L~~L~L~~N 285 (964)
+++|.+++..|..+.. .+|+.|++++|... ...+..+..+. +|+.|++++|
T Consensus 186 l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n 264 (606)
T 3t6q_A 186 LNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKH 264 (606)
T ss_dssp CTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTC
T ss_pred cCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecC
Confidence 9999999877766554 67999999887511 01112222222 7888899999
Q ss_pred cccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCcccc-ccC
Q 037111 286 QLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIG-NIS 364 (964)
Q Consensus 286 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~~ 364 (964)
.+++..+..|..+++|+.|++++|+++ .+|..+..+++|++|++++|.+.+..|..+.++++|+.|++++|.+.+ ...
T Consensus 265 ~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 343 (606)
T 3t6q_A 265 YFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGT 343 (606)
T ss_dssp CCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCS
T ss_pred ccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccch
Confidence 888777777888899999999999888 567778888889999999998888888888888899999999998875 444
Q ss_pred cccCCCCCCcEEEccCCeecccc--CccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCcc-ccc
Q 037111 365 DDFGIYPNLKLFDLSYNKFYGEL--SSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLE-LAN 441 (964)
Q Consensus 365 ~~~~~l~~L~~L~Ls~N~i~~~~--~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-l~~ 441 (964)
..+..+++|+.|++++|++.+.. +..+..+++|++|++++|.+++..+..+..+++|++|++++|++++..+.. +..
T Consensus 344 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 423 (606)
T 3t6q_A 344 GCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQN 423 (606)
T ss_dssp STTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTT
T ss_pred hhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhC
Confidence 55888889999999999888766 667888889999999999888888888888888999999999888765544 788
Q ss_pred cCCcceeecccccccCCCchhhhccCCCCceecccCccccc---cCCCcccccccceecCCccccCccchhhhhccccCC
Q 037111 442 LTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKS---IPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLS 518 (964)
Q Consensus 442 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 518 (964)
+++|++|++++|.+++..|..+..+++|++|+|++|++++. .+..+..+++|++|++++|++++..|..|+.+++|+
T Consensus 424 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 503 (606)
T 3t6q_A 424 LHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMN 503 (606)
T ss_dssp CTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred cccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCC
Confidence 88899999999988888888888888999999999988762 235688888899999999999888888888889999
Q ss_pred eecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCC
Q 037111 519 ELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIP 580 (964)
Q Consensus 519 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 580 (964)
.|+|++|++++..|..+.++++| .|+|++|++++.+|..|..+++|+.|++++|+++|.++
T Consensus 504 ~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 504 HVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp EEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred EEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 99999999988888888888888 89999999988888888888889999999999888665
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4.8e-58 Score=560.76 Aligned_cols=537 Identities=23% Similarity=0.239 Sum_probs=465.6
Q ss_pred eCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcc
Q 037111 55 CNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNL 134 (964)
Q Consensus 55 C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L 134 (964)
|...++ .+++++.+++ .+|....+++++|+|++|.+++..|..|+++++|++|+|++|.+++..|..++.+++|
T Consensus 2 C~~~~~--~~~cs~~~L~----~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 75 (680)
T 1ziw_A 2 CTVSHE--VADCSHLKLT----QVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPML 75 (680)
T ss_dssp --CBSS--EEECCSSCCS----SCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTC
T ss_pred ceeECC--eeECCCCCcc----ccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCc
Confidence 543343 4677777665 4555566899999999999998877889999999999999999999999999999999
Q ss_pred cEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccc
Q 037111 135 EVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKN 213 (964)
Q Consensus 135 ~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 213 (964)
++|+|++|.+++.++. ++.+++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|+|++|
T Consensus 76 ~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 155 (680)
T 1ziw_A 76 KVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNN 155 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSS
T ss_pred CEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCC
Confidence 9999999999988774 999999999999999999888889999999999999999999999999999999999999999
Q ss_pred cccCCcccccc--CccccceeeccccccCCCChhhhhcc---------------------------cccceeeccccccc
Q 037111 214 HLRGPIPSSFG--YLRKLTKLELSNNQLSGSIPQEIGNL---------------------------KLLTDLSLSQNQLR 264 (964)
Q Consensus 214 ~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l---------------------------~~L~~L~L~~N~l~ 264 (964)
.+++..+..+. .+++|++|++++|++++..|..+..+ ++|+.|++++|.++
T Consensus 156 ~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~ 235 (680)
T 1ziw_A 156 KIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLS 235 (680)
T ss_dssp CCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCC
T ss_pred cccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCccc
Confidence 99988887765 45899999999999998888777654 45778888888898
Q ss_pred cccCCcccCccc--cceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccc-----
Q 037111 265 GTVPSSLSNLSS--LEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIG----- 337 (964)
Q Consensus 265 ~~~p~~l~~l~~--L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~----- 337 (964)
+..|..+..++. |++|+|++|++++..|..|+.+++|+.|++++|++++..|..+..+++|++|++++|...+
T Consensus 236 ~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~ 315 (680)
T 1ziw_A 236 TTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLA 315 (680)
T ss_dssp EECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC-----
T ss_pred ccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccc
Confidence 888888888765 9999999999998888899999999999999999999999999999999999999876543
Q ss_pred cccc----cccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeecc--ccCccccCC--CccceEeecccccCC
Q 037111 338 SLPK----TLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYG--ELSSNWWNC--PQLGILKIAGNNITG 409 (964)
Q Consensus 338 ~~p~----~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~--~~~~~~~~~--~~L~~L~L~~n~i~~ 409 (964)
.+|. .+..+++|+.|++++|.+++..+..|..+++|+.|++++|.+.. .....|..+ ++|+.|++++|.+++
T Consensus 316 ~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~ 395 (680)
T 1ziw_A 316 SLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISK 395 (680)
T ss_dssp -CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCE
T ss_pred cccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCe
Confidence 2332 78889999999999999999999999999999999999998543 223334433 689999999999999
Q ss_pred CCCCCCcccccCcEEeccCCcccccCC-ccccccCCcceeecccccccCCCchhhhccCCCCceecccCccc--cccCCC
Q 037111 410 GIPPEIGNATQLHELDFSSNHLVGKVP-LELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFS--KSIPGN 486 (964)
Q Consensus 410 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~~~~ 486 (964)
..|.+|..+++|++|+|++|++.+.+| ..|..+++|++|+|++|.+++..+..|..+++|+.|++++|.+. +..|..
T Consensus 396 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~ 475 (680)
T 1ziw_A 396 IESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSP 475 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCT
T ss_pred EChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcc
Confidence 999999999999999999999987665 68899999999999999999888999999999999999999987 568889
Q ss_pred cccccccceecCCccccCccchhhhhccccCCeecccCccccCCCC--------hhcccccccceeeccCCcCCCccccc
Q 037111 487 MGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIP--------PEICNLESLEKLNLSHNNLSGSIPTN 558 (964)
Q Consensus 487 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~~~~ 558 (964)
|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+ ..|.++++|+.|+|++|+|+...+..
T Consensus 476 ~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~ 555 (680)
T 1ziw_A 476 FQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEV 555 (680)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred cccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHH
Confidence 9999999999999999998888889999999999999999986422 23788999999999999999666678
Q ss_pred ccccccceEEEecCCcccccCCCC-ccCCCCCcccccCCC
Q 037111 559 FENMHGLLSIDISYNELDGPIPSI-EAFRHAPVEALQGNK 597 (964)
Q Consensus 559 ~~~l~~L~~l~ls~N~l~~~~~~~-~~~~~~~~~~~~~n~ 597 (964)
|.++++|+.||+++|++++.++.. ..+..+....+.+|.
T Consensus 556 ~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~ 595 (680)
T 1ziw_A 556 FKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNL 595 (680)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred cccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCc
Confidence 999999999999999999766543 233445555566663
No 6
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.2e-58 Score=554.63 Aligned_cols=494 Identities=22% Similarity=0.224 Sum_probs=421.6
Q ss_pred CCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCC
Q 037111 77 QFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLS 155 (964)
Q Consensus 77 ~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~ 155 (964)
.+|....++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.+|. ++.++
T Consensus 25 ~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~ 104 (606)
T 3vq2_A 25 KVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLT 104 (606)
T ss_dssp SCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCT
T ss_pred cCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcc
Confidence 45556668899999999999988888899999999999999999987788899999999999999999988664 88999
Q ss_pred CCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCC-CCCccccCCCCcchhhcccccccCCccccccCccccc----
Q 037111 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPG-SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT---- 230 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~---- 230 (964)
+|++|+|++|++++..|..++++++|++|++++|++++ .+|..|+++++|++|+|++|++++..+..|+.+++|+
T Consensus 105 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~ 184 (606)
T 3vq2_A 105 SLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNL 184 (606)
T ss_dssp TCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCC
T ss_pred cCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccc
Confidence 99999999999998777889999999999999999986 5688999999999999999999988888888888776
Q ss_pred eeeccccccCCCChhhhhcccccceeeccccccc-cccCCcccCccccceeec---------------------------
Q 037111 231 KLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLR-GTVPSSLSNLSSLEILHL--------------------------- 282 (964)
Q Consensus 231 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~L--------------------------- 282 (964)
+|++++|.+++..+..+... +|+.|++++|.++ +..|..+.++++|+.+++
T Consensus 185 ~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l 263 (606)
T 3vq2_A 185 SLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTI 263 (606)
T ss_dssp EEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEE
T ss_pred eeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccH
Confidence 79999999986655555544 8999999999886 345556666666666655
Q ss_pred ------ccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCC
Q 037111 283 ------YDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEK 356 (964)
Q Consensus 283 ------~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~ 356 (964)
..|.+.+.+|. +..+++|+.|++++|.+... | .+..+++|+.|++++|.+ +.+| .+ .+++|+.|++++
T Consensus 264 ~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l-~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~ 337 (606)
T 3vq2_A 264 DEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYL-E-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTM 337 (606)
T ss_dssp EEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCC-C-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEES
T ss_pred hheeccccccccccccc-cccCCCCCEEEecCccchhh-h-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccC
Confidence 56667766666 88889999999999998754 4 788888999999999998 6677 44 889999999999
Q ss_pred CccccccCcccCCCCCCcEEEccCCeecccc--CccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCccccc
Q 037111 357 NQLIGNISDDFGIYPNLKLFDLSYNKFYGEL--SSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGK 434 (964)
Q Consensus 357 N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~--~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 434 (964)
|...+.. .+..+++|+.|++++|++++.. +..+..+++|++|++++|.+++ +|..+..+++|++|++++|++.+.
T Consensus 338 n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~ 414 (606)
T 3vq2_A 338 NKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRV 414 (606)
T ss_dssp CSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEEST
T ss_pred CcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCc
Confidence 9654433 6778899999999999998763 6777889999999999999885 458888999999999999999887
Q ss_pred CC-ccccccCCcceeecccccccCCCchhhhccCCCCceecccCcccc-ccCCCcccccccceecCCccccCccchhhhh
Q 037111 435 VP-LELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSK-SIPGNMGYLLKLHYLNMSSNEFSQEIPIQLG 512 (964)
Q Consensus 435 ~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 512 (964)
.| ..+..+++|++|++++|.+++..|..+..+++|++|++++|++++ ..|..|..+++|++|+|++|++++..|..|+
T Consensus 415 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 494 (606)
T 3vq2_A 415 TEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFD 494 (606)
T ss_dssp TTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred cChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhc
Confidence 77 678899999999999999998888899999999999999999987 4788899999999999999999988888899
Q ss_pred ccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccc-cceEEEecCCcccccCCC
Q 037111 513 KLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMH-GLLSIDISYNELDGPIPS 581 (964)
Q Consensus 513 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~l~ls~N~l~~~~~~ 581 (964)
.+++|+.|+|++|++++.+|..|.++++|+.|+|++|+|+ .+|..+..++ +|+.|++++|++.|.++.
T Consensus 495 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 495 TLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp TCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred ccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 9999999999999999888899999999999999999998 5777788887 599999999999987764
No 7
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.2e-59 Score=564.16 Aligned_cols=486 Identities=19% Similarity=0.259 Sum_probs=340.1
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCC-------CCCCCCCCCCCCCCCcee---eceEeCCCCCeeEEecCCCCCCCccC
Q 037111 7 SNSIEAARGLLKWKATLQNHNNSLLP-------SWTLDPVNATNITTPCTW---SGISCNHAGRIISINLTSTSLKGTLD 76 (964)
Q Consensus 7 ~~~~~~~~all~~k~~~~~~~~~~l~-------sW~~~~~~~~~~~~~C~w---~gv~C~~~~~v~~l~l~~~~l~g~l~ 76 (964)
.+.+.|++||++||.++.+++|..-. +|..+ ++||.| .||+|+..|||++|+|+++++.|.++
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-------~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp 98 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-------KELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVP 98 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-------SCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEEC
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-------CCcccccCCCCeEEcCCCCEEEEEecCcccCCcCC
Confidence 34557999999999999877665433 78743 789999 99999988999999999999999988
Q ss_pred CCccCcCcceeEEeccCCcc------cc------CCCccccCCCCcCeeecccCCccCcCCcccCC-CCcccEEEcc---
Q 037111 77 QFPFSLFSHLSYLDLNENQL------YG------NIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGL-LTNLEVLHMF--- 140 (964)
Q Consensus 77 ~~~~~~~~~L~~L~l~~n~l------~~------~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~-l~~L~~L~l~--- 140 (964)
+ .++.+++|++|||++|.+ .| .+|... +..|+ +++++|.+.+.+|..++. +..+..+++.
T Consensus 99 ~-~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~ 174 (636)
T 4eco_A 99 D-AIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKS 174 (636)
T ss_dssp G-GGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCC
T ss_pred h-HHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccc
Confidence 6 688999999999999987 33 455544 66778 899999998888887762 2222222322
Q ss_pred -----------------ccccCCcccccCCCCCCCEEEcCCCCCCCC-----------------CCCCCC--CCCCCcEE
Q 037111 141 -----------------VNHLNGSIPEIGHLSSLKNLALDGNHLDGP-----------------IPVSIG--NLSSLVGL 184 (964)
Q Consensus 141 -----------------~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~-----------------~p~~~~--~l~~L~~L 184 (964)
.|+++|.++.++.+++|++|+|++|+++|. +|..++ ++++|++|
T Consensus 175 ~~~~~~~~l~~l~l~~~~n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L 254 (636)
T 4eco_A 175 IKKSSRITLKDTQIGQLSNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDV 254 (636)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEE
T ss_pred cccccccchhhhhhccccCCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEE
Confidence 567777333477777888888888877775 777777 77788888
Q ss_pred EEecCCCCCCCCccccCCCCcchhhccccc-ccC-CccccccCc------cccceeeccccccCCCChh--hhhcccccc
Q 037111 185 YLYNNSLPGSIPSSIGNLSNLVYLFLKKNH-LRG-PIPSSFGYL------RKLTKLELSNNQLSGSIPQ--EIGNLKLLT 254 (964)
Q Consensus 185 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l------~~L~~L~L~~N~l~~~~p~--~~~~l~~L~ 254 (964)
+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. .++.+++|+
T Consensus 255 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~ 333 (636)
T 4eco_A 255 EVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLG 333 (636)
T ss_dssp EEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCC
T ss_pred EecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCC
Confidence 888887777777777777778888888777 777 677777665 77777777777777 6666 777777777
Q ss_pred eeeccccccccccCCcccCccccceeecccccccccCCcccccCcc-ccEEEeeCccCcccCCcccccCC--cceEEEee
Q 037111 255 DLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMN-LNSLSVGGNQFTGFLPQNICQSG--SLQYFSVH 331 (964)
Q Consensus 255 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~~p~~~~~~~--~L~~L~l~ 331 (964)
+|++++|+++|.+| .+..+++|++|+|++|+++ .+|..+..+++ |+.|++++|+++ .+|..+.... +|++|+++
T Consensus 334 ~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls 410 (636)
T 4eco_A 334 MLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFS 410 (636)
T ss_dssp EEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECC
T ss_pred EEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECc
Confidence 77777777777777 7777777777777777777 67777777777 777777777777 4566555543 67777777
Q ss_pred ccccccccccccc-------CCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecc
Q 037111 332 DNYFIGSLPKTLR-------NCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAG 404 (964)
Q Consensus 332 ~n~l~~~~p~~l~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~ 404 (964)
+|.+.+.+|..+. .+++|+.|+|++|+++.++...+..+++|+.|+|++|+++......+....
T Consensus 411 ~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~--------- 481 (636)
T 4eco_A 411 YNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDEN--------- 481 (636)
T ss_dssp SSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETT---------
T ss_pred CCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhcccc---------
Confidence 7777776666666 555666666666666655555555566666666666666533222222111
Q ss_pred cccCCCCCCCCcccccCcEEeccCCcccccCCcccc--ccCCcceeecccccccCCCchhhhccCCCCceec------cc
Q 037111 405 NNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELA--NLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDL------SA 476 (964)
Q Consensus 405 n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L------s~ 476 (964)
..+.++++|++|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+| ++
T Consensus 482 --------~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~ 551 (636)
T 4eco_A 482 --------ENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQG 551 (636)
T ss_dssp --------EECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTC
T ss_pred --------ccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCccccc
Confidence 00112225566666666655 4455544 55666666666666654 5555555666666665 55
Q ss_pred CccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccC
Q 037111 477 NRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRG 529 (964)
Q Consensus 477 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 529 (964)
|++.+.+|..+..+++|++|+|++|+| +.+|..+. ++|+.|+|++|++..
T Consensus 552 N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 552 NRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp CBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred CcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcc
Confidence 667777777777777777777777777 45665554 677778888887664
No 8
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-57 Score=566.26 Aligned_cols=485 Identities=21% Similarity=0.195 Sum_probs=331.0
Q ss_pred cCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcC-CcccCCCCcccEEEccccccCCcccc-cCCCCCCCE
Q 037111 82 LFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKI-PSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKN 159 (964)
Q Consensus 82 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~ 159 (964)
.+++|++|||++|.+++..|..|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+++..|. ++.+++|++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 101 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFE 101 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCC
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCE
Confidence 4566666666666666666666666666666666666555455 55566666666666666666665553 666666666
Q ss_pred EEcCCCCCCCCCCCC--CCCCCCCcEEEEecCCCCCCCC-ccccCCCCcchhhcccccccCCccccccCc--cccceeec
Q 037111 160 LALDGNHLDGPIPVS--IGNLSSLVGLYLYNNSLPGSIP-SSIGNLSNLVYLFLKKNHLRGPIPSSFGYL--RKLTKLEL 234 (964)
Q Consensus 160 L~L~~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L 234 (964)
|+|++|.+++.+|.. ++++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..+..|..+ ++|+.|+|
T Consensus 102 L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L 181 (844)
T 3j0a_A 102 LRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSL 181 (844)
T ss_dssp EECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEE
T ss_pred eeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEEC
Confidence 666666666655443 6666666666666666665443 456666666666666666666666666655 56666666
Q ss_pred cccccCCCChhhhhcccc------cceeeccccccccccCCccc------------------------------------
Q 037111 235 SNNQLSGSIPQEIGNLKL------LTDLSLSQNQLRGTVPSSLS------------------------------------ 272 (964)
Q Consensus 235 ~~N~l~~~~p~~~~~l~~------L~~L~L~~N~l~~~~p~~l~------------------------------------ 272 (964)
++|.+.+..|..++.+.+ |+.|++++|++++..+..+.
T Consensus 182 ~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~ 261 (844)
T 3j0a_A 182 AANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFA 261 (844)
T ss_dssp CCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTT
T ss_pred CCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhh
Confidence 666666655555554443 66666666666554444332
Q ss_pred Cc--cccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCC
Q 037111 273 NL--SSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLE 350 (964)
Q Consensus 273 ~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~ 350 (964)
.+ ++|+.|++++|.+.+..|..|..+++|+.|+|++|++++..|..+..+++|++|++++|.+.+..|..|..+++|+
T Consensus 262 ~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 341 (844)
T 3j0a_A 262 GLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVA 341 (844)
T ss_dssp TTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCC
T ss_pred ccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCC
Confidence 22 5677777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred eeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCc
Q 037111 351 RVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNH 430 (964)
Q Consensus 351 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~ 430 (964)
.|++++|.++.+.+..|..+++|+.|+|++|.+++.. .+++|+.|++++|.++. +|.. ..+++.|++++|+
T Consensus 342 ~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~-----~~~~L~~L~l~~N~l~~-l~~~---~~~l~~L~ls~N~ 412 (844)
T 3j0a_A 342 YIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH-----FIPSIPDIFLSGNKLVT-LPKI---NLTANLIHLSENR 412 (844)
T ss_dssp EEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS-----SCCSCSEEEEESCCCCC-CCCC---CTTCCEEECCSCC
T ss_pred EEECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc-----CCCCcchhccCCCCccc-cccc---ccccceeecccCc
Confidence 7777777777777777777777777777777776432 26677777777777763 3332 3567777788777
Q ss_pred ccccCC-ccccccCCcceeecccccccCCCch-hhhccCCCCceecccCccc-----cccCCCcccccccceecCCcccc
Q 037111 431 LVGKVP-LELANLTSLNDLILNGNQLSGGIPP-ELGLLTDLGYLDLSANRFS-----KSIPGNMGYLLKLHYLNMSSNEF 503 (964)
Q Consensus 431 l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l 503 (964)
+++... ..+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|..+++|+.|+|++|+|
T Consensus 413 l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 492 (844)
T 3j0a_A 413 LENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYL 492 (844)
T ss_dssp CCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHH
T ss_pred cccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcc
Confidence 765322 2245677788888888877754332 3455677888888888776 33445577777788888888888
Q ss_pred CccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCC
Q 037111 504 SQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIP 580 (964)
Q Consensus 504 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 580 (964)
++..|..|..+++|+.|+|++|+|++..+..+. ++|+.|+|++|+|++.+|..|. +|+.+++++|++.|.++
T Consensus 493 ~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 493 NSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SLSVLDITHNKFICECE 564 (844)
T ss_dssp TTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEEEECCCCSSS
T ss_pred cccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---CcCEEEecCCCcccccc
Confidence 777777777788888888888888765555554 6788888888888877776654 56777888888877665
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=4.3e-57 Score=544.77 Aligned_cols=504 Identities=20% Similarity=0.205 Sum_probs=450.1
Q ss_pred cCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCC
Q 037111 92 NENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGP 170 (964)
Q Consensus 92 ~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~ 170 (964)
++..++ .+|..+.. .+++|+|++|.|++..|..|+.+++|++|+|++|++++..|. |+.+++|++|+|++|++++.
T Consensus 20 ~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 96 (606)
T 3t6q_A 20 ENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFM 96 (606)
T ss_dssp TTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEE
T ss_pred CCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCccccc
Confidence 344555 56776643 799999999999988899999999999999999999988775 89999999999999999999
Q ss_pred CCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcc
Q 037111 171 IPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNL 250 (964)
Q Consensus 171 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 250 (964)
.|..|+++++|++|++++|++++..|..++++++|++|+|++|++++.....+..+++|++|++++|.+++..|..++.+
T Consensus 97 ~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 176 (606)
T 3t6q_A 97 AETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSL 176 (606)
T ss_dssp CTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTT
T ss_pred ChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhh
Confidence 99999999999999999999998778889999999999999999998655555569999999999999998889999999
Q ss_pred cccc--eeeccccccccccCCcccCccccceeeccccccc--------------------------ccCCcccccCc--c
Q 037111 251 KLLT--DLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS--------------------------GHIPQEIGNFM--N 300 (964)
Q Consensus 251 ~~L~--~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--------------------------~~~~~~~~~l~--~ 300 (964)
++|+ .|++++|++++..|..+. ..+|+.|++++|... ...+..+..+. +
T Consensus 177 ~~L~~l~L~l~~n~l~~~~~~~~~-~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~ 255 (606)
T 3t6q_A 177 QQATNLSLNLNGNDIAGIEPGAFD-SAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMS 255 (606)
T ss_dssp TTCCSEEEECTTCCCCEECTTTTT-TCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSE
T ss_pred cccceeEEecCCCccCccChhHhh-hccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCc
Confidence 9999 899999999987777665 468999999887511 01122333333 7
Q ss_pred ccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccC
Q 037111 301 LNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSY 380 (964)
Q Consensus 301 L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 380 (964)
|+.|++++|.+++..+..+..+++|++|++++|.+. .+|..+..+++|++|++++|.+++..+..+..+++|+.|++++
T Consensus 256 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 334 (606)
T 3t6q_A 256 VESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKG 334 (606)
T ss_dssp EEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCS
T ss_pred eeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCC
Confidence 999999999999999999999999999999999988 6788899999999999999999999999999999999999999
Q ss_pred CeeccccC-ccccCCCccceEeecccccCCCC--CCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccC
Q 037111 381 NKFYGELS-SNWWNCPQLGILKIAGNNITGGI--PPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSG 457 (964)
Q Consensus 381 N~i~~~~~-~~~~~~~~L~~L~L~~n~i~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 457 (964)
|.+.+..+ ..+..+++|++|++++|.+++.. +..+..+++|++|++++|++.+..|..|..+++|++|+|++|.+++
T Consensus 335 n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 414 (606)
T 3t6q_A 335 NTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKV 414 (606)
T ss_dssp CSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEEC
T ss_pred CCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCC
Confidence 99986554 45889999999999999998766 7889999999999999999999999999999999999999999997
Q ss_pred CCch-hhhccCCCCceecccCccccccCCCcccccccceecCCccccCcc---chhhhhccccCCeecccCccccCCCCh
Q 037111 458 GIPP-ELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQE---IPIQLGKLVQLSELDLSHNLLRGEIPP 533 (964)
Q Consensus 458 ~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 533 (964)
..+. .+..+++|++|++++|.+++..|..+..+++|++|++++|++++. .+..+..+++|+.|+|++|++++..|.
T Consensus 415 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 494 (606)
T 3t6q_A 415 KDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQH 494 (606)
T ss_dssp CTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTT
T ss_pred cccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChh
Confidence 7664 489999999999999999999999999999999999999999873 236799999999999999999998899
Q ss_pred hcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCCC-ccCCCCCcccccCCCCccC
Q 037111 534 EICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSI-EAFRHAPVEALQGNKGLCG 601 (964)
Q Consensus 534 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~-~~~~~~~~~~~~~n~~~c~ 601 (964)
.|.++++|+.|+|++|++++..|..|..++.| .||+++|++++.+|.. ..++.+....+.+||+.|+
T Consensus 495 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 495 AFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp TTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred hhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 99999999999999999999999999999999 9999999999887753 3456677788999999995
No 10
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.8e-57 Score=553.16 Aligned_cols=510 Identities=17% Similarity=0.220 Sum_probs=374.0
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCC--cee------------eceEeCCCCCeeEEecCCCCC
Q 037111 6 ASNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTP--CTW------------SGISCNHAGRIISINLTSTSL 71 (964)
Q Consensus 6 ~~~~~~~~~all~~k~~~~~~~~~~l~sW~~~~~~~~~~~~~--C~w------------~gv~C~~~~~v~~l~l~~~~l 71 (964)
+++..+|++||++||+++.+ | +|+.+...+ ..+| |.| .||+|+..+||+.|+|+++++
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~-~-----~W~~~~~~~--~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L 335 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDG-K-----NWRYYSGTI--NNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGA 335 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTG-G-----GCCCCCSSC--SSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCC
T ss_pred cccchHHHHHHHHHHHHcCC-C-----CCCcCCCcc--cccCCccccccccccccccCcCceEecCCCCEEEEECccCCC
Confidence 44556799999999999964 3 787543111 1244 999 999999889999999999999
Q ss_pred CCccCCCccCcCcceeEEec-cCCccccCCCccccCC----CC-----cCe------eec-ccCCccC-----------c
Q 037111 72 KGTLDQFPFSLFSHLSYLDL-NENQLYGNIPSPIGNL----TK-----LKF------LNL-SSNHFSG-----------K 123 (964)
Q Consensus 72 ~g~l~~~~~~~~~~L~~L~l-~~n~l~~~~p~~~~~l----~~-----L~~------L~L-s~n~l~~-----------~ 123 (964)
.|.+++ .++.+++|++||| ++|.++|..|-..... +. ++. ++. ....+++ .
T Consensus 336 ~G~ip~-~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~ 414 (876)
T 4ecn_A 336 KGRVPD-AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEM 414 (876)
T ss_dssp EEEECG-GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTS
T ss_pred CCcCch-HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccc
Confidence 998875 6788999999999 8888888744321111 00 000 000 0000000 0
Q ss_pred CCcccCCCCcccEEEcc--ccccCCcccccCCCCCCCEEEcCCCCCCC-----------------CCCCCCC--CCCCCc
Q 037111 124 IPSEIGLLTNLEVLHMF--VNHLNGSIPEIGHLSSLKNLALDGNHLDG-----------------PIPVSIG--NLSSLV 182 (964)
Q Consensus 124 ~p~~~~~l~~L~~L~l~--~n~l~~~~~~~~~l~~L~~L~L~~n~l~~-----------------~~p~~~~--~l~~L~ 182 (964)
.+........++.+.+. .|++++.++.++.+++|++|+|++|+|+| .+|..++ ++++|+
T Consensus 415 ~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~ 494 (876)
T 4ecn_A 415 KPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLT 494 (876)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCC
T ss_pred cccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCC
Confidence 01111122233333333 36666633346777777777777777776 4888887 889999
Q ss_pred EEEEecCCCCCCCCccccCCCCcchhhccccc-ccC-CccccccCcc-------ccceeeccccccCCCChh--hhhccc
Q 037111 183 GLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNH-LRG-PIPSSFGYLR-------KLTKLELSNNQLSGSIPQ--EIGNLK 251 (964)
Q Consensus 183 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l~-------~L~~L~L~~N~l~~~~p~--~~~~l~ 251 (964)
+|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..++.++ +|++|+|++|+++ .+|. .+++++
T Consensus 495 ~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~ 573 (876)
T 4ecn_A 495 DVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMV 573 (876)
T ss_dssp EEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCT
T ss_pred EEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCC
Confidence 99999998888889888899999999999997 887 7887777666 8999999999998 7777 888999
Q ss_pred ccceeeccccccccccCCcccCccccceeecccccccccCCcccccCcc-ccEEEeeCccCcccCCcccccCCc--ceEE
Q 037111 252 LLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMN-LNSLSVGGNQFTGFLPQNICQSGS--LQYF 328 (964)
Q Consensus 252 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~~p~~~~~~~~--L~~L 328 (964)
+|++|+|++|+++ .+| .+..+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|+++ .+|..+..... |+.|
T Consensus 574 ~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L 649 (876)
T 4ecn_A 574 KLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSV 649 (876)
T ss_dssp TCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEE
T ss_pred CCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEE
Confidence 9999999999998 777 7888999999999999998 78888888888 999999999988 56777766654 9999
Q ss_pred Eeecccccccccccc---c--CCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccC-------CCc
Q 037111 329 SVHDNYFIGSLPKTL---R--NCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWN-------CPQ 396 (964)
Q Consensus 329 ~l~~n~l~~~~p~~l---~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~-------~~~ 396 (964)
++++|.+.+.+|... . .+.+|+.|+|++|.++.++...+..+++|+.|+|++|+++......+.. +++
T Consensus 650 ~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~ 729 (876)
T 4ecn_A 650 DFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYL 729 (876)
T ss_dssp ECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGG
T ss_pred ECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCC
Confidence 999999888666432 2 3458999999999999777777778899999999999998544444332 348
Q ss_pred cceEeecccccCCCCCCCCc--ccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceec
Q 037111 397 LGILKIAGNNITGGIPPEIG--NATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDL 474 (964)
Q Consensus 397 L~~L~L~~n~i~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 474 (964)
|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|++|. ++
T Consensus 730 L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------------------~l 789 (876)
T 4ecn_A 730 LTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------------------DA 789 (876)
T ss_dssp CCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB------------------CT
T ss_pred ccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC------------------Cc
Confidence 999999999999 6777776 89999999999999996 78889999999999998865 45
Q ss_pred ccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCC
Q 037111 475 SANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLS 552 (964)
Q Consensus 475 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 552 (964)
++|++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++|+.|||++|++....+..+.....+..+.|.+|++.
T Consensus 790 s~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 790 EGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp TCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred ccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 55666666666666666666666666666 44555444 46666666666666555555555555556666666554
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.1e-56 Score=536.26 Aligned_cols=502 Identities=22% Similarity=0.212 Sum_probs=444.0
Q ss_pred EEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCC
Q 037111 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNH 166 (964)
Q Consensus 88 ~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~ 166 (964)
.++.++++++ .+|..+. ++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|. ++.+++|++|+|++|.
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 4555667787 5777664 8999999999999988888999999999999999999998775 8999999999999999
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccC-CccccccCccccceeeccccccCCCChh
Q 037111 167 LDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRG-PIPSSFGYLRKLTKLELSNNQLSGSIPQ 245 (964)
Q Consensus 167 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 245 (964)
+++..|..|+++++|++|+|++|++++..|..++++++|++|+|++|.+++ .+|..|+.+++|++|+|++|++++..|.
T Consensus 92 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 92 IQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred ccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 999889999999999999999999998877899999999999999999987 5699999999999999999999988888
Q ss_pred hhhcccccc----eeeccccccccccCCcccCccccceeeccccccc-ccCCcccccCccccEEEe--------------
Q 037111 246 EIGNLKLLT----DLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS-GHIPQEIGNFMNLNSLSV-------------- 306 (964)
Q Consensus 246 ~~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l-------------- 306 (964)
.++.+++|+ +|++++|.+++..+..+.. .+|+.|++++|.++ +.+|..+.++++|+.+++
T Consensus 172 ~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~-~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~ 250 (606)
T 3vq2_A 172 DLQFLRENPQVNLSLDMSLNPIDFIQDQAFQG-IKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIF 250 (606)
T ss_dssp TTHHHHHCTTCCCEEECTTCCCCEECTTTTTT-CEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCC
T ss_pred hhhhhhccccccceeeccCCCcceeCcccccC-ceeeeeeccCCccchhHHHHHhccccccccccccccccccCCccccc
Confidence 888888776 7999999999666655554 49999999999987 355667777777776666
Q ss_pred -------------------eCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCccc
Q 037111 307 -------------------GGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDF 367 (964)
Q Consensus 307 -------------------~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~ 367 (964)
..|.+.+..|. +..+++|+.|++++|.+.. +| .+..+++|+.|++++|.+..+ + .+
T Consensus 251 ~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l~~l-p-~~ 325 (606)
T 3vq2_A 251 EPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQLKQF-P-TL 325 (606)
T ss_dssp CGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCCSSC-C-CC
T ss_pred ChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccCccc-c-cC
Confidence 66677777776 8888999999999999865 45 889999999999999999544 4 45
Q ss_pred CCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCC--CCCCCcccccCcEEeccCCcccccCCccccccCCc
Q 037111 368 GIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGG--IPPEIGNATQLHELDFSSNHLVGKVPLELANLTSL 445 (964)
Q Consensus 368 ~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 445 (964)
.+++|+.|++++|+..+.. .+..+++|++|++++|.+++. .+..+..+++|++|++++|.+++ +|..+..+++|
T Consensus 326 -~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L 401 (606)
T 3vq2_A 326 -DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEEL 401 (606)
T ss_dssp -CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTC
T ss_pred -CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCC
Confidence 8999999999999655433 677899999999999999866 37788899999999999999985 66889999999
Q ss_pred ceeecccccccCCCc-hhhhccCCCCceecccCccccccCCCcccccccceecCCccccCc-cchhhhhccccCCeeccc
Q 037111 446 NDLILNGNQLSGGIP-PELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQ-EIPIQLGKLVQLSELDLS 523 (964)
Q Consensus 446 ~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls 523 (964)
+.|++++|.+++..| ..+..+++|++|++++|.+++..|..+..+++|++|++++|++++ .+|..|+.+++|+.|+|+
T Consensus 402 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls 481 (606)
T 3vq2_A 402 QHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLS 481 (606)
T ss_dssp CEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECT
T ss_pred CeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECC
Confidence 999999999998877 689999999999999999999999999999999999999999987 478899999999999999
Q ss_pred CccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCCCccCC-CCCcccccCCCCccCC
Q 037111 524 HNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFR-HAPVEALQGNKGLCGE 602 (964)
Q Consensus 524 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~~~~-~~~~~~~~~n~~~c~~ 602 (964)
+|++++..|..|.++++|++|+|++|++++.+|..|..+++|+.||+++|+++..++....+. .+....+.+||+.|+.
T Consensus 482 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c 561 (606)
T 3vq2_A 482 KCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACIC 561 (606)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSS
T ss_pred CCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCC
Confidence 999999999999999999999999999999999999999999999999999996555444443 3666788999999964
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=8.6e-55 Score=542.14 Aligned_cols=498 Identities=24% Similarity=0.215 Sum_probs=433.0
Q ss_pred EEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcc-c-ccCCCCCCCEEEcCCC
Q 037111 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSI-P-EIGHLSSLKNLALDGN 165 (964)
Q Consensus 88 ~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~-~-~~~~l~~L~~L~L~~n 165 (964)
..|.++++++ .+|. ..++|++|||++|.|++..|..|+.+++|++|+|++|...+.+ | .++.+++|++|+|++|
T Consensus 8 ~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 3445566676 4676 4689999999999999888999999999999999999777766 4 4899999999999999
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCCCcc--ccCCCCcchhhcccccccCCcc-ccccCccccceeeccccccCCC
Q 037111 166 HLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSS--IGNLSNLVYLFLKKNHLRGPIP-SSFGYLRKLTKLELSNNQLSGS 242 (964)
Q Consensus 166 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~ 242 (964)
.+++..|..|+++++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..+ ..|+.+++|++|+|++|.+++.
T Consensus 84 ~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~ 163 (844)
T 3j0a_A 84 KIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV 163 (844)
T ss_dssp CCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC
T ss_pred cCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee
Confidence 999999999999999999999999999877765 9999999999999999998765 5799999999999999999999
Q ss_pred Chhhhhcc--cccceeeccccccccccCCcccCccc------cceeecccccccccCCcccccC----------------
Q 037111 243 IPQEIGNL--KLLTDLSLSQNQLRGTVPSSLSNLSS------LEILHLYDNQLSGHIPQEIGNF---------------- 298 (964)
Q Consensus 243 ~p~~~~~l--~~L~~L~L~~N~l~~~~p~~l~~l~~------L~~L~L~~N~l~~~~~~~~~~l---------------- 298 (964)
.+..+..+ ++|+.|+|+.|.+.+..|..+..+++ |+.|++++|.+++.++..+...
T Consensus 164 ~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~ 243 (844)
T 3j0a_A 164 CEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIM 243 (844)
T ss_dssp CSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCC
T ss_pred CHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccc
Confidence 99999988 89999999999999888887777665 9999999999887666555432
Q ss_pred ----------------------ccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCC
Q 037111 299 ----------------------MNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEK 356 (964)
Q Consensus 299 ----------------------~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~ 356 (964)
++|+.|++++|.+++..|..+..+++|+.|++++|.+.+..|..|.++++|+.|+|++
T Consensus 244 ~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~ 323 (844)
T 3j0a_A 244 GAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSY 323 (844)
T ss_dssp BCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEES
T ss_pred cccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCC
Confidence 5788999999999888888888899999999999999888888899999999999999
Q ss_pred CccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCC
Q 037111 357 NQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVP 436 (964)
Q Consensus 357 N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 436 (964)
|.+++..+..|..+++|+.|++++|++....+..|..+++|+.|+|++|.+++. ..+++|+.|++++|+++ .+|
T Consensus 324 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~ 397 (844)
T 3j0a_A 324 NLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLP 397 (844)
T ss_dssp CCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCC
T ss_pred CCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccc
Confidence 999888888899999999999999999888888888899999999999988743 23778899999999987 445
Q ss_pred ccccccCCcceeecccccccCCC-chhhhccCCCCceecccCccccccCC-CcccccccceecCCccccC-----ccchh
Q 037111 437 LELANLTSLNDLILNGNQLSGGI-PPELGLLTDLGYLDLSANRFSKSIPG-NMGYLLKLHYLNMSSNEFS-----QEIPI 509 (964)
Q Consensus 437 ~~l~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~~~ 509 (964)
.. ..+++.|++++|++++.. +..+..+++|++|+|++|++++..+. .+..+++|+.|+|++|.++ +..+.
T Consensus 398 ~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~ 474 (844)
T 3j0a_A 398 KI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWD 474 (844)
T ss_dssp CC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSS
T ss_pred cc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchh
Confidence 43 467899999999998643 23456899999999999999875544 4567899999999999997 34456
Q ss_pred hhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCCCccCCCCC
Q 037111 510 QLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAP 589 (964)
Q Consensus 510 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~~~~~~~ 589 (964)
.|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+. ++|+.|||++|++++.+|. .|..+.
T Consensus 475 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~--~~~~L~ 550 (844)
T 3j0a_A 475 VFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPD--VFVSLS 550 (844)
T ss_dssp CSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSC--CCSSCC
T ss_pred hhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChh--HhCCcC
Confidence 789999999999999999998899999999999999999999988888777 8999999999999999885 477788
Q ss_pred cccccCCCCccCC
Q 037111 590 VEALQGNKGLCGE 602 (964)
Q Consensus 590 ~~~~~~n~~~c~~ 602 (964)
...+.+||+.|+.
T Consensus 551 ~l~l~~Np~~C~c 563 (844)
T 3j0a_A 551 VLDITHNKFICEC 563 (844)
T ss_dssp EEEEEEECCCCSS
T ss_pred EEEecCCCccccc
Confidence 8889999999953
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.2e-53 Score=504.92 Aligned_cols=497 Identities=22% Similarity=0.210 Sum_probs=435.6
Q ss_pred CCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCC
Q 037111 77 QFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLS 155 (964)
Q Consensus 77 ~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~ 155 (964)
.+|....+++++|||++|++++..|..|.++++|++|+|++|++++..|..|+.+++|++|+|++|.+++.+|. ++.++
T Consensus 21 ~ip~~l~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 100 (570)
T 2z63_A 21 KIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLS 100 (570)
T ss_dssp SCCSSSCSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCT
T ss_pred ccCCCccccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcc
Confidence 45656667899999999999988888999999999999999999987788899999999999999999988764 89999
Q ss_pred CCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCC-CCCccccCCCCcchhhcccccccCCccccccCcccc----c
Q 037111 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPG-SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKL----T 230 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L----~ 230 (964)
+|++|++++|++++..+..++++++|++|++++|.+++ .+|..|+++++|++|++++|++++..+..|+.+++| +
T Consensus 101 ~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~ 180 (570)
T 2z63_A 101 SLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 180 (570)
T ss_dssp TCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCC
T ss_pred ccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhh
Confidence 99999999999997776689999999999999999997 479999999999999999999999888999999999 8
Q ss_pred eeeccccccCCCChhhhhcccccceeecccccccc-ccCCcccCccccceeeccccccc------ccCCcccccCc--cc
Q 037111 231 KLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRG-TVPSSLSNLSSLEILHLYDNQLS------GHIPQEIGNFM--NL 301 (964)
Q Consensus 231 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~------~~~~~~~~~l~--~L 301 (964)
.|++++|.+++..|..+..+ +|+.|++++|.... .++..+..+++++.+.+..+.+. ......+..+. .+
T Consensus 181 ~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l 259 (570)
T 2z63_A 181 SLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTI 259 (570)
T ss_dssp EEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEE
T ss_pred hcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccch
Confidence 99999999998888877766 89999999986542 34555667777777666544332 12223344443 36
Q ss_pred cEEEeeCc-cCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccC
Q 037111 302 NSLSVGGN-QFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSY 380 (964)
Q Consensus 302 ~~L~l~~N-~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 380 (964)
+.+++++| .+.+..|..+..+++|+.|++++|.+. .+|..+..+ +|+.|++++|.+...+. ..+++|+.|++++
T Consensus 260 ~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~~---~~l~~L~~L~l~~ 334 (570)
T 2z63_A 260 EEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQFPT---LKLKSLKRLTFTS 334 (570)
T ss_dssp EEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSSCCB---CBCSSCCEEEEES
T ss_pred hhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccccCc---ccccccCEEeCcC
Confidence 78888888 788889999999999999999999987 478888888 99999999999985544 4788999999999
Q ss_pred CeeccccCccccCCCccceEeecccccCCCC--CCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCC
Q 037111 381 NKFYGELSSNWWNCPQLGILKIAGNNITGGI--PPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGG 458 (964)
Q Consensus 381 N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 458 (964)
|.+.+..+. ..+++|++|++++|.+++.. +..+..+++|++|++++|.+.+..+. +..+++|++|++++|.+++.
T Consensus 335 n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~ 411 (570)
T 2z63_A 335 NKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQM 411 (570)
T ss_dssp CBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESC
T ss_pred Ccccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccc
Confidence 998776554 68899999999999998654 56788899999999999999865554 99999999999999999977
Q ss_pred Cc-hhhhccCCCCceecccCccccccCCCcccccccceecCCccccC-ccchhhhhccccCCeecccCccccCCCChhcc
Q 037111 459 IP-PELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFS-QEIPIQLGKLVQLSELDLSHNLLRGEIPPEIC 536 (964)
Q Consensus 459 ~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 536 (964)
.+ ..+..+++|++|++++|.+.+..|..|..+++|++|++++|+++ +.+|..+..+++|+.|+|++|++++..|..|.
T Consensus 412 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 491 (570)
T 2z63_A 412 SEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN 491 (570)
T ss_dssp TTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred cchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhh
Confidence 66 57889999999999999999999999999999999999999997 57899999999999999999999988899999
Q ss_pred cccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCCC
Q 037111 537 NLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSI 582 (964)
Q Consensus 537 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~ 582 (964)
++++|+.|+|++|++++..|..|..+++|+.|++++|+++|.+|..
T Consensus 492 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 492 SLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred cccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 9999999999999999998899999999999999999999998864
No 14
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=7.5e-53 Score=501.61 Aligned_cols=492 Identities=22% Similarity=0.232 Sum_probs=386.9
Q ss_pred CceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCc
Q 037111 47 PCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPS 126 (964)
Q Consensus 47 ~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 126 (964)
.|.|.|+ |+.. ++++ ..+|.+.+++|++|+|++|++++..|..|+++++|++|+|++|++++..|.
T Consensus 3 ~C~~~~~-c~~~---------~~~l----~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CDGR---------SRSF----TSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EECT---------TSCC----SSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EECC---------CCcc----ccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 4999999 9643 2233 345656678999999999999998899999999999999999999988889
Q ss_pred ccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCC-CCCCCCCCCCCCcEEEEecCCCCCCCC-ccccCCC
Q 037111 127 EIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDG-PIPVSIGNLSSLVGLYLYNNSLPGSIP-SSIGNLS 203 (964)
Q Consensus 127 ~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~ 203 (964)
.|+.+++|++|+|++|++++.+|. ++.+++|++|+|++|++++ .+|..++++++|++|++++|++.+.+| ..|++++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~ 148 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLT 148 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred hccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccc
Confidence 999999999999999999999887 9999999999999999997 467889999999999999999554555 6899999
Q ss_pred CcchhhcccccccCCccccccCccccceeeccccccCCCChhhh-hcccccceeecccccccccc--C-CcccCccccce
Q 037111 204 NLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEI-GNLKLLTDLSLSQNQLRGTV--P-SSLSNLSSLEI 279 (964)
Q Consensus 204 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~--p-~~l~~l~~L~~ 279 (964)
+|++|++++|++++..|..++.+++|++|++++|.+. .+|..+ ..+++|++|++++|++++.. | .....+++|+.
T Consensus 149 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~ 227 (549)
T 2z81_A 149 SLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKK 227 (549)
T ss_dssp EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCE
T ss_pred ccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccc
Confidence 9999999999999999999999999999999999987 455544 56899999999999999642 2 22345788999
Q ss_pred eecccccccccCC----cccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecC
Q 037111 280 LHLYDNQLSGHIP----QEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLE 355 (964)
Q Consensus 280 L~L~~N~l~~~~~----~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~ 355 (964)
|++++|.+++..+ ..+..+++|+.+++++|.+.+...-.. .....+..+.+|+.|++.
T Consensus 228 L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~------------------~~~~~~~~l~~L~~L~l~ 289 (549)
T 2z81_A 228 LAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNP------------------SESDVVSELGKVETVTIR 289 (549)
T ss_dssp EEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCC------------------CTTTCCCCCTTCCEEEEE
T ss_pred eeccccccchhHHHHHHHHhhhhccccccccccccccccccccc------------------cchhhhhhhccccccccc
Confidence 9999999886544 344667889999999998876421100 001122334444444444
Q ss_pred CCcccccc-----CcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCC---CCCCcccccCcEEecc
Q 037111 356 KNQLIGNI-----SDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGI---PPEIGNATQLHELDFS 427 (964)
Q Consensus 356 ~N~l~~~~-----~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~---~~~~~~l~~L~~L~Ls 427 (964)
++.+.... +..+...++|+.|++++|++.......+..+++|++|++++|.+++.. +..+..+++|++|+|+
T Consensus 290 ~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls 369 (549)
T 2z81_A 290 RLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLS 369 (549)
T ss_dssp SCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECT
T ss_pred ccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEcc
Confidence 44433211 111233456777777777765433333346777777777777776544 2346778888888888
Q ss_pred CCcccccCC--ccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCc
Q 037111 428 SNHLVGKVP--LELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQ 505 (964)
Q Consensus 428 ~N~l~~~~~--~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 505 (964)
+|++++..+ ..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|+++. +|..+ .++|++|+|++|+|++
T Consensus 370 ~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~ 445 (549)
T 2z81_A 370 QNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDS 445 (549)
T ss_dssp TSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSC
T ss_pred CCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhh
Confidence 888875432 45788888999999999888 677788888899999999999874 44433 2589999999999986
Q ss_pred cchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCC
Q 037111 506 EIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPS 581 (964)
Q Consensus 506 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~ 581 (964)
.. ..+++|++|+|++|+|+ .+|. ...+++|+.|+|++|+|++.+|..|..+++|+.|++++|++.|.+|.
T Consensus 446 ~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 446 FS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp CC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred hc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 43 57899999999999998 6665 56789999999999999999999999999999999999999998874
No 15
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2e-52 Score=503.57 Aligned_cols=441 Identities=22% Similarity=0.309 Sum_probs=333.8
Q ss_pred cceeEEeccCCccccCCCccccCCCCcCeeecccCCc------cC------cCCcccCCCCcccEEEccccccCCcccc-
Q 037111 84 SHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHF------SG------KIPSEIGLLTNLEVLHMFVNHLNGSIPE- 150 (964)
Q Consensus 84 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l------~~------~~p~~~~~l~~L~~L~l~~n~l~~~~~~- 150 (964)
.+++.|+|++|+++|.+|++|++|++|++|+|++|.+ .| .+|... +..|+ ++++.|.+.+.+|.
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 4789999999999999999999999999999999987 33 455554 67788 89999999887774
Q ss_pred cCC-C------------------CCCCEEEcC--CCCCCCCCCCCCCCCCCCcEEEEecCCCCCC---------------
Q 037111 151 IGH-L------------------SSLKNLALD--GNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS--------------- 194 (964)
Q Consensus 151 ~~~-l------------------~~L~~L~L~--~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--------------- 194 (964)
++. + ..++.+.+. +|+++| +|..++++++|++|+|++|++++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~ 236 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQ 236 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHH
T ss_pred HHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhc
Confidence 331 1 122222222 578887 888899999999999999999875
Q ss_pred --CCcccc--CCCCcchhhcccccccCCccccccCccccceeeccccc-cCC-CChhhhhcc------cccceeeccccc
Q 037111 195 --IPSSIG--NLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ-LSG-SIPQEIGNL------KLLTDLSLSQNQ 262 (964)
Q Consensus 195 --~p~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~L~~N~ 262 (964)
+|..++ ++++|++|+|++|++.+.+|..|+.+++|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+
T Consensus 237 ~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~ 316 (636)
T 4eco_A 237 QYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNN 316 (636)
T ss_dssp HHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSC
T ss_pred ccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCc
Confidence 888888 88888888888888888888888888888888888887 887 788888776 888888888888
Q ss_pred cccccCC--cccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCc-ceEEEeecccccccc
Q 037111 263 LRGTVPS--SLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGS-LQYFSVHDNYFIGSL 339 (964)
Q Consensus 263 l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~-L~~L~l~~n~l~~~~ 339 (964)
++ .+|. .+..+++|++|++++|+++|.+| .++.+++|+.|++++|+++ .+|..+..+++ |++|++++|.+. .+
T Consensus 317 l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~l 392 (636)
T 4eco_A 317 LK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YI 392 (636)
T ss_dssp CS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SC
T ss_pred CC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-cc
Confidence 88 7777 78888888888888888887777 7788888888888888777 44555555555 555555555554 34
Q ss_pred cccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCcccc-------CCCccceEeecccccCCCCC
Q 037111 340 PKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWW-------NCPQLGILKIAGNNITGGIP 412 (964)
Q Consensus 340 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~-------~~~~L~~L~L~~n~i~~~~~ 412 (964)
|..+..++ +++|+.|++++|++++..+..+. .+++|+.|+|++|.++...+
T Consensus 393 p~~~~~~~----------------------l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~ 450 (636)
T 4eco_A 393 PNIFDAKS----------------------VSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPK 450 (636)
T ss_dssp CSCCCTTC----------------------SSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCT
T ss_pred chhhhhcc----------------------cCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCH
Confidence 44443322 22455555555555555444444 55566677777777664433
Q ss_pred CCCcccccCcEEeccCCcccccCCcc-cccc-------CCcceeecccccccCCCchhhh--ccCCCCceecccCccccc
Q 037111 413 PEIGNATQLHELDFSSNHLVGKVPLE-LANL-------TSLNDLILNGNQLSGGIPPELG--LLTDLGYLDLSANRFSKS 482 (964)
Q Consensus 413 ~~~~~l~~L~~L~Ls~N~l~~~~~~~-l~~l-------~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~ 482 (964)
..+..+++|++|+|++|+++ .+|.. +... ++|+.|+|++|+++ .+|..+. .+++|++|+|++|++++
T Consensus 451 ~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~- 527 (636)
T 4eco_A 451 ELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK- 527 (636)
T ss_dssp HHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-
T ss_pred HHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-
Confidence 34556788888888888888 44443 3333 39999999999999 7888887 99999999999999997
Q ss_pred cCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCccccccccc
Q 037111 483 IPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENM 562 (964)
Q Consensus 483 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 562 (964)
+|..+..+++|++|+|++|+ ++++|++.+.+|..+.++++|+.|+|++|+| +.+|..+.
T Consensus 528 ip~~~~~l~~L~~L~Ls~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~-- 586 (636)
T 4eco_A 528 FPTQPLNSSTLKGFGIRNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT-- 586 (636)
T ss_dssp CCCGGGGCSSCCEEECCSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--
T ss_pred cChhhhcCCCCCEEECCCCc------------------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--
Confidence 88899999999999998876 5677777777777777777888888888877 46666655
Q ss_pred ccceEEEecCCccccc
Q 037111 563 HGLLSIDISYNELDGP 578 (964)
Q Consensus 563 ~~L~~l~ls~N~l~~~ 578 (964)
++|+.||+++|++...
T Consensus 587 ~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 587 PNISVLDIKDNPNISI 602 (636)
T ss_dssp TTCCEEECCSCTTCEE
T ss_pred CcCCEEECcCCCCccc
Confidence 6788888888877653
No 16
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.8e-50 Score=479.93 Aligned_cols=502 Identities=22% Similarity=0.203 Sum_probs=432.6
Q ss_pred EeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCC
Q 037111 89 LDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHL 167 (964)
Q Consensus 89 L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l 167 (964)
++-++.+++ .+|..+. +++++|+|++|.+++..+..|+.+++|++|+|++|++++..+. ++.+++|++|+|++|++
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 88 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (570)
T ss_dssp EECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC
Confidence 444455666 5777553 5799999999999988888999999999999999999988775 89999999999999999
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccC-CccccccCccccceeeccccccCCCChhh
Q 037111 168 DGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRG-PIPSSFGYLRKLTKLELSNNQLSGSIPQE 246 (964)
Q Consensus 168 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 246 (964)
++..|..|+++++|++|++++|++++..+..++++++|++|+|++|.+++ .+|..|+.+++|++|++++|++++..|..
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~ 168 (570)
T 2z63_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (570)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGG
T ss_pred CccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHH
Confidence 98888999999999999999999997666679999999999999999997 46999999999999999999999888889
Q ss_pred hhccccc----ceeeccccccccccCCcccCccccceeecccccccc-cCCcccccCccccEEEeeCccCc------ccC
Q 037111 247 IGNLKLL----TDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG-HIPQEIGNFMNLNSLSVGGNQFT------GFL 315 (964)
Q Consensus 247 ~~~l~~L----~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~------~~~ 315 (964)
++.+++| +.|++++|.+++..|..+... +|+.|++++|.... .++..+..+.+++.+.+..+.+. ...
T Consensus 169 ~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~ 247 (570)
T 2z63_A 169 LRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFD 247 (570)
T ss_dssp GHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECC
T ss_pred ccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcc
Confidence 9999999 899999999998888877766 89999999986542 34566778888887776544332 222
Q ss_pred CcccccCC--cceEEEeecc-cccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCcccc
Q 037111 316 PQNICQSG--SLQYFSVHDN-YFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWW 392 (964)
Q Consensus 316 p~~~~~~~--~L~~L~l~~n-~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~ 392 (964)
...+..+. .++.++++++ .+.+..|..+..+++|+.|++++|.+++ .+..+..+ +|+.|++++|++..... .
T Consensus 248 ~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~-~L~~L~l~~n~~~~l~~---~ 322 (570)
T 2z63_A 248 KSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF-GWQHLELVNCKFGQFPT---L 322 (570)
T ss_dssp TTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCC-CCSEEEEESCBCSSCCB---C
T ss_pred hhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccC-CccEEeeccCcccccCc---c
Confidence 23333332 4778888888 7888899999999999999999999986 45556667 99999999999984433 4
Q ss_pred CCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccC--CccccccCCcceeecccccccCCCchhhhccCCCC
Q 037111 393 NCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKV--PLELANLTSLNDLILNGNQLSGGIPPELGLLTDLG 470 (964)
Q Consensus 393 ~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 470 (964)
.+++|+.|++++|.+.+..+. ..+++|++|++++|++++.. +..+..+++|++|++++|.+++..+. +..+++|+
T Consensus 323 ~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~ 399 (570)
T 2z63_A 323 KLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLE 399 (570)
T ss_dssp BCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCC
T ss_pred cccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCC
Confidence 789999999999998866555 78899999999999998654 67888999999999999999965544 99999999
Q ss_pred ceecccCccccccC-CCcccccccceecCCccccCccchhhhhccccCCeecccCcccc-CCCChhcccccccceeeccC
Q 037111 471 YLDLSANRFSKSIP-GNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLR-GEIPPEICNLESLEKLNLSH 548 (964)
Q Consensus 471 ~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~ 548 (964)
+|++++|.+++..+ ..+..+++|++|++++|++++..|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|+|++
T Consensus 400 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~ 479 (570)
T 2z63_A 400 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479 (570)
T ss_dssp EEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred EEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCC
Confidence 99999999998766 57899999999999999999999999999999999999999998 57899999999999999999
Q ss_pred CcCCCcccccccccccceEEEecCCcccccCCCC-ccCCCCCcccccCCCCccCC
Q 037111 549 NNLSGSIPTNFENMHGLLSIDISYNELDGPIPSI-EAFRHAPVEALQGNKGLCGE 602 (964)
Q Consensus 549 N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~ 602 (964)
|++++..|..|..+++|+.|++++|++++.+|.. ..++.+....+.+|++.|+.
T Consensus 480 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 480 CQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 9999998999999999999999999999987753 45566777789999998863
No 17
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=6.4e-51 Score=437.87 Aligned_cols=257 Identities=25% Similarity=0.410 Sum_probs=206.3
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++++..+.||+|+||+||+|+++ ..||||+++.........+.|.+|+.++++++|||||+++|++.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 356788899999999999999875 369999997655566667889999999999999999999999865 56899999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC-
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS- 846 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 846 (964)
||+||+|.++++... .++++.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+......
T Consensus 112 y~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 112 WCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred cCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 999999999997543 4599999999999999999999999 99999999999999999999999999998765432
Q ss_pred -CCcccccccccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 847 -SNWSELAGTYGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 847 -~~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
.......||+.|||||++.+ +.|+.++|||||||++|||+||+.||.... ....+...+......
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~-----------~~~~~~~~~~~~~~~ 256 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-----------NRDQIIFMVGRGYAS 256 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----------CHHHHHHHHHTTCCC
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC-----------hHHHHHHHHhcCCCC
Confidence 23345689999999999864 458999999999999999999999985322 122223332222222
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+.......+++..+.+++.+||+.||++||||+||++.|+
T Consensus 257 p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le 296 (307)
T 3omv_A 257 PDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp CCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred CCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 2122233456677889999999999999999999998774
No 18
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4.3e-51 Score=441.60 Aligned_cols=255 Identities=21% Similarity=0.360 Sum_probs=213.3
Q ss_pred hcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
.+++..+.||+|+||+||+|++. +++.||||+++... .....++|.+|+.++++++|||||+++|+|.+++..
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~ 104 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 104 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence 45677889999999999999863 46789999997533 344457899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC
Q 037111 763 FLVYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE 828 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~ 828 (964)
++|||||++|+|.+++.... ...++|.++.+|+.|||+||+|||++ +||||||||+|||++++
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~ 181 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDK 181 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCC
Confidence 99999999999999996532 23589999999999999999999999 99999999999999999
Q ss_pred CceEEeccCcccccCCCC--CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCC
Q 037111 829 YEAHVSDFGTAKLLKPDS--SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPG 905 (964)
Q Consensus 829 ~~~kl~Dfg~a~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~ 905 (964)
+.+||+|||+|+...... .......||+.|||||++.++.|+.++|||||||++|||+| |+.||..
T Consensus 182 ~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~----------- 250 (308)
T 4gt4_A 182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG----------- 250 (308)
T ss_dssp GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT-----------
T ss_pred CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCC-----------
Confidence 999999999998765432 22345679999999999999999999999999999999998 8999752
Q ss_pred CChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 906 ANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....+....+..+..++. +.+++..+.+++.+||+.||++||||+||++.|++
T Consensus 251 ~~~~~~~~~i~~~~~~~~-----p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 251 YSNQDVVEMIRNRQVLPC-----PDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp CCHHHHHHHHHTTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCCCC-----cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 233445555544443322 23456678899999999999999999999999975
No 19
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.7e-51 Score=446.66 Aligned_cols=253 Identities=20% Similarity=0.357 Sum_probs=214.2
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
+++|++.+.||+|+||+||+|+. .+|+.||||++..........+.+.+|+.++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 46899999999999999999976 47999999999765555566778999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
|||+||+|.+++.......+++.+++.|+.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+......
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 999999999999877767789999999999999999999999 99999999999999999999999999998765433
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||.. ....+.+..+.....++.+
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~-----------~~~~~~~~~i~~~~~~~~~-- 246 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA-----------GSMKNLVLKIISGSFPPVS-- 246 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC-----------SSHHHHHHHHHHTCCCCCC--
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-----------cCHHHHHHHHHcCCCCCCC--
Confidence 333456799999999999999999999999999999999999999852 3344566666666555332
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+.++.+++.+||.+||++|||++|+++
T Consensus 247 ---~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 247 ---LHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 223456788899999999999999999975
No 20
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.7e-51 Score=439.32 Aligned_cols=253 Identities=27% Similarity=0.458 Sum_probs=212.2
Q ss_pred hcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
++|.+.+.||+|+||+||+|++. ++..||||+++.. .....++|.+|++++++++|||||+++|+|.+++..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC--ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 46888899999999999999764 4678999999743 344567899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcC-----------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCce
Q 037111 763 FLVYEYLERGSLARILSSET-----------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEA 831 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~ 831 (964)
++|||||++|+|.++++... ...++|.++.+++.||++||+|||++ +||||||||+|||+++++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcE
Confidence 99999999999999997532 35699999999999999999999999 99999999999999999999
Q ss_pred EEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCCh
Q 037111 832 HVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANM 908 (964)
Q Consensus 832 kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~ 908 (964)
||+|||+|+........ .....||+.|||||++.+..|+.++|||||||++|||+| |+.||.. ...
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~-----------~~~ 236 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ-----------LSN 236 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT-----------SCH
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC-----------CCH
Confidence 99999999876544322 123468999999999999999999999999999999998 8999753 233
Q ss_pred hHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 909 NEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+.+..+..+..++. +..++.++.+++.+||+.||++|||+++|++.|+
T Consensus 237 ~~~~~~i~~~~~~~~-----p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~ 285 (299)
T 4asz_A 237 NEVIECITQGRVLQR-----PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285 (299)
T ss_dssp HHHHHHHHHTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCC-----CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 455555555443322 1235567889999999999999999999999886
No 21
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3e-50 Score=439.30 Aligned_cols=253 Identities=26% Similarity=0.437 Sum_probs=205.5
Q ss_pred hcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
++|...+.||+|+||+||+|+++ +++.||||+++. ......++|.+|++++++++|||||+++|+|.+++..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC--CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc--CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 46778889999999999999864 477899999974 3445567899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcC-------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC
Q 037111 763 FLVYEYLERGSLARILSSET-------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY 829 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~ 829 (964)
|+|||||++|+|.++++... ..+++|.++.+|+.||++||+|||+. +||||||||+|||+++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCC
Confidence 99999999999999997542 24589999999999999999999999 999999999999999999
Q ss_pred ceEEeccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCC
Q 037111 830 EAHVSDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGA 906 (964)
Q Consensus 830 ~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~ 906 (964)
.+||+|||+|+....... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||.. .
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~-----------~ 264 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ-----------L 264 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS-----------S
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCC-----------C
Confidence 999999999987654432 2234679999999999999999999999999999999999 8999753 2
Q ss_pred ChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 907 NMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...+.+..+..+..++. +..++.++.+++.+||+.||++||||+||++.|+
T Consensus 265 ~~~~~~~~i~~g~~~~~-----p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~ 315 (329)
T 4aoj_A 265 SNTEAIDCITQGRELER-----PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQ 315 (329)
T ss_dssp CHHHHHHHHHHTCCCCC-----CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCC-----cccccHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 23344555444332221 1234567889999999999999999999999886
No 22
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5e-50 Score=473.65 Aligned_cols=456 Identities=24% Similarity=0.261 Sum_probs=309.2
Q ss_pred EEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCccc-ccCCCCCCCEEEcCCCC
Q 037111 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGNH 166 (964)
Q Consensus 88 ~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~L~~n~ 166 (964)
+||+++|+++ .+|..+. ++|++|+|++|.+++..|..|+.+++|++|+|++|++++..| .++.+++|++|+|++|+
T Consensus 4 ~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp EEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred eEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 5666666666 3555554 666666666666665555566666666666666666666554 36666666666666666
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCC-CCCccccCCCCcchhhcccccccCCccccccCcccc--ceeecccccc--CC
Q 037111 167 LDGPIPVSIGNLSSLVGLYLYNNSLPG-SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKL--TKLELSNNQL--SG 241 (964)
Q Consensus 167 l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~L~L~~N~l--~~ 241 (964)
++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|.+++ ..+..+++| ++|++++|.+ .+
T Consensus 81 l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~ 154 (520)
T 2z7x_B 81 LV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEK 154 (520)
T ss_dssp CC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSS
T ss_pred ee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccc
Confidence 66 34444 56666666666666665 356666666667777777666664 345555555 7777777777 66
Q ss_pred CChhhhhccc-ccceeeccccccccccCC-cccCccccceeeccccc-------ccccCCcccccCccccEEEeeCccCc
Q 037111 242 SIPQEIGNLK-LLTDLSLSQNQLRGTVPS-SLSNLSSLEILHLYDNQ-------LSGHIPQEIGNFMNLNSLSVGGNQFT 312 (964)
Q Consensus 242 ~~p~~~~~l~-~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~L~~N~-------l~~~~~~~~~~l~~L~~L~l~~N~l~ 312 (964)
..|..+..+. ....+++++|++.+.++. .+..+++|+.|++++|. +.+.+| .++.+++|+.|++++|.++
T Consensus 155 ~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~ 233 (520)
T 2z7x_B 155 EDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETT 233 (520)
T ss_dssp CCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEE
T ss_pred cccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccC
Confidence 6666666554 334556777776654443 46667777777777776 555554 6677777777777777766
Q ss_pred ccCCcccc---cCCcceEEEeecccccccccccc-----cCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeec
Q 037111 313 GFLPQNIC---QSGSLQYFSVHDNYFIGSLPKTL-----RNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFY 384 (964)
Q Consensus 313 ~~~p~~~~---~~~~L~~L~l~~n~l~~~~p~~l-----~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~ 384 (964)
+..+..+. ..++|++|++++|.+.+.+|..+ .++++|+.+++++|.+ ..+...+..+
T Consensus 234 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~-------------- 298 (520)
T 2z7x_B 234 WNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEI-------------- 298 (520)
T ss_dssp HHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHH--------------
T ss_pred HHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcc--------------
Confidence 43222111 12355566666665555555554 4444444444444444 1111111111
Q ss_pred cccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccC--CCchh
Q 037111 385 GELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSG--GIPPE 462 (964)
Q Consensus 385 ~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~--~~~~~ 462 (964)
....+|+.|++++|.+.... .+..+++|++|++++|++++..|..++.+++|++|+|++|++++ .+|..
T Consensus 299 -------~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~ 369 (520)
T 2z7x_B 299 -------FSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEM 369 (520)
T ss_dssp -------HHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHH
T ss_pred -------cccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHH
Confidence 01134555555555544321 12567788888888888888788888888888899998888886 55677
Q ss_pred hhccCCCCceecccCccccccC-CCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhccccccc
Q 037111 463 LGLLTDLGYLDLSANRFSKSIP-GNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESL 541 (964)
Q Consensus 463 ~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 541 (964)
+..+++|++|+|++|++++.+| ..+..+++|++|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|
T Consensus 370 ~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L 446 (520)
T 2z7x_B 370 TTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEAL 446 (520)
T ss_dssp HTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTC
T ss_pred HhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCC
Confidence 8889999999999999987444 4588899999999999999887777665 79999999999998 788888899999
Q ss_pred ceeeccCCcCCCcccccccccccceEEEecCCcccccCC
Q 037111 542 EKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIP 580 (964)
Q Consensus 542 ~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 580 (964)
+.|+|++|+|++..+..|..+++|+.|++++|+++|.++
T Consensus 447 ~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 447 QELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 999999999995444459999999999999999998765
No 23
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=8.5e-49 Score=475.60 Aligned_cols=530 Identities=20% Similarity=0.199 Sum_probs=409.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCC
Q 037111 28 NSLLPSWTLDPVNATNITTPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNL 107 (964)
Q Consensus 28 ~~~l~sW~~~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l 107 (964)
...+++|... -+..|....|...++. .+.++.++ ..+|-+..+++++|||++|+|++..|.+|.++
T Consensus 10 ~~~~~~~~~~--------~p~~~~~c~~~~~~~~--~~c~~~~l----~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l 75 (635)
T 4g8a_A 10 DDKLAAANSS--------IPESWEPCVEVVPNIT--YQCMELNF----YKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSF 75 (635)
T ss_dssp -----------------------CCSEEEETTTE--EECTTSCC----SSCCSSSCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred cchhhcccCC--------CCCCCCCccccCCCCE--EECCCCCc----CccCCCCCcCCCEEEeeCCCCCCCCHHHHhCC
Confidence 3457777642 2233544444322221 23334443 46677777899999999999998878899999
Q ss_pred CCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEE
Q 037111 108 TKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYL 186 (964)
Q Consensus 108 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 186 (964)
++|++|+|++|+|++..|.+|++|++|++|+|++|++++.++. |..+++|++|+|++|++++..+..|+++++|++|+|
T Consensus 76 ~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~L 155 (635)
T 4g8a_A 76 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 155 (635)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeecc
Confidence 9999999999999977778899999999999999999988875 899999999999999999888888999999999999
Q ss_pred ecCCCCC-CCCccccCCCCcchhhcccccccCCccccccCccccc----eeeccccccCCCChhhhhcccccceeecccc
Q 037111 187 YNNSLPG-SIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT----KLELSNNQLSGSIPQEIGNLKLLTDLSLSQN 261 (964)
Q Consensus 187 ~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 261 (964)
++|++++ .+|..++++++|++|+|++|++++..+..|..+.+++ .++++.|.++...+..+ ....++.+++++|
T Consensus 156 s~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n 234 (635)
T 4g8a_A 156 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNN 234 (635)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESC
T ss_pred ccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcc
Confidence 9999986 4688899999999999999999999898888777654 67889999885544443 3345667777777
Q ss_pred ccccc-cCCcccCccccceee------------------------------ccccccc---ccCCcccccCccccEEEee
Q 037111 262 QLRGT-VPSSLSNLSSLEILH------------------------------LYDNQLS---GHIPQEIGNFMNLNSLSVG 307 (964)
Q Consensus 262 ~l~~~-~p~~l~~l~~L~~L~------------------------------L~~N~l~---~~~~~~~~~l~~L~~L~l~ 307 (964)
..... .+..+..+..++... +..+... ...+..+..+.+++.+.+.
T Consensus 235 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 314 (635)
T 4g8a_A 235 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLV 314 (635)
T ss_dssp CSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEE
T ss_pred cccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccc
Confidence 54421 122233333333333 3222221 1223345556677778888
Q ss_pred CccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccc-
Q 037111 308 GNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGE- 386 (964)
Q Consensus 308 ~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~- 386 (964)
+|.+.... .+.....++.|++.+|.+.+..+. .+..|+.+++..|.+.... .+..+++|+.|++++|.+...
T Consensus 315 ~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~ 387 (635)
T 4g8a_A 315 SVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKG 387 (635)
T ss_dssp SCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCBC--CCCBCTTCCEEECCSSCCBEEE
T ss_pred cccccccc--ccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCCc--ccccccccccchhhcccccccc
Confidence 77776543 345567788888888887665443 3566778888888765533 345688999999999988643
Q ss_pred -cCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCC-ccccccCCcceeecccccccCCCchhhh
Q 037111 387 -LSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVP-LELANLTSLNDLILNGNQLSGGIPPELG 464 (964)
Q Consensus 387 -~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 464 (964)
.+..+..+.+|+.|++..|.+.. .+..+..+++|+.++++.|......+ ..+..+++++.+++++|.+.+..+..+.
T Consensus 388 ~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~ 466 (635)
T 4g8a_A 388 CCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 466 (635)
T ss_dssp ECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTT
T ss_pred ccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccc
Confidence 34556678899999999988774 45667889999999999988765544 4578899999999999999988899999
Q ss_pred ccCCCCceecccCcc-ccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccce
Q 037111 465 LLTDLGYLDLSANRF-SKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEK 543 (964)
Q Consensus 465 ~l~~L~~L~Ls~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 543 (964)
.+++|+.|+|++|.+ .+..|..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|.++++|+.
T Consensus 467 ~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~ 546 (635)
T 4g8a_A 467 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 546 (635)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCE
T ss_pred cchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCE
Confidence 999999999999985 4467888999999999999999999989999999999999999999999888889999999999
Q ss_pred eeccCCcCCCccccccccc-ccceEEEecCCcccccCC
Q 037111 544 LNLSHNNLSGSIPTNFENM-HGLLSIDISYNELDGPIP 580 (964)
Q Consensus 544 L~Ls~N~l~~~~~~~~~~l-~~L~~l~ls~N~l~~~~~ 580 (964)
|+|++|+|++..|..|..+ ++|+.|+|++|+|+|...
T Consensus 547 L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 547 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp EECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred EECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9999999999999999988 689999999999998764
No 24
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=6e-50 Score=488.57 Aligned_cols=465 Identities=18% Similarity=0.217 Sum_probs=393.3
Q ss_pred cceeEEeccCCccccCCCccccCCCCcCeeec-ccCCccCcCCcccCCC----Cccc--EEEc----------cccccCC
Q 037111 84 SHLSYLDLNENQLYGNIPSPIGNLTKLKFLNL-SSNHFSGKIPSEIGLL----TNLE--VLHM----------FVNHLNG 146 (964)
Q Consensus 84 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L-s~n~l~~~~p~~~~~l----~~L~--~L~l----------~~n~l~~ 146 (964)
.+++.|+|++|+++|.+|++|++|++|++|+| ++|.++|..|-..... ..++ .+.+ ....+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 47999999999999999999999999999999 9999988755432111 0000 0000 0001111
Q ss_pred c-----------cc-ccCCCCCCCEEEcCC--CCCCCCCCCCCCCCCCCcEEEEecCCCCC-----------------CC
Q 037111 147 S-----------IP-EIGHLSSLKNLALDG--NHLDGPIPVSIGNLSSLVGLYLYNNSLPG-----------------SI 195 (964)
Q Consensus 147 ~-----------~~-~~~~l~~L~~L~L~~--n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~ 195 (964)
. .+ .......++.+.+.. |++++ +|..++++++|++|+|++|++++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 0 01 012233455555554 89998 89999999999999999999998 38
Q ss_pred Ccccc--CCCCcchhhcccccccCCccccccCccccceeeccccc-cCC-CChhhhhccc-------ccceeeccccccc
Q 037111 196 PSSIG--NLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ-LSG-SIPQEIGNLK-------LLTDLSLSQNQLR 264 (964)
Q Consensus 196 p~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~ 264 (964)
|..++ ++++|++|+|++|++.+.+|..|+.+++|++|+|++|+ +++ .+|..++.++ +|++|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 99988 99999999999999999999999999999999999998 998 8999888887 9999999999999
Q ss_pred cccCC--cccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCc-ceEEEeecccccccccc
Q 037111 265 GTVPS--SLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGS-LQYFSVHDNYFIGSLPK 341 (964)
Q Consensus 265 ~~~p~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~-L~~L~l~~n~l~~~~p~ 341 (964)
.+|. .+.++++|+.|+|++|+++ .+| .|+.+++|+.|+|++|+++ .+|..+..+++ |+.|++++|.+. .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 8898 8999999999999999999 888 8999999999999999999 78888999998 999999999998 7788
Q ss_pred cccCCCc--CCeeecCCCccccccCccc---C--CCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCC
Q 037111 342 TLRNCTS--LERVRLEKNQLIGNISDDF---G--IYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPE 414 (964)
Q Consensus 342 ~l~~l~~--L~~L~L~~N~l~~~~~~~~---~--~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~ 414 (964)
.+..++. |+.|+|++|++++..+... . ..++|+.|+|++|+++......+..+++|+.|+|++|.|+...+..
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~ 716 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENS 716 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTS
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHH
Confidence 8877765 9999999999988665432 2 3458999999999999655555568999999999999999443333
Q ss_pred Ccc-------cccCcEEeccCCcccccCCcccc--ccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCC
Q 037111 415 IGN-------ATQLHELDFSSNHLVGKVPLELA--NLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPG 485 (964)
Q Consensus 415 ~~~-------l~~L~~L~Ls~N~l~~~~~~~l~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 485 (964)
+.. +++|++|+|++|+|+ .+|..+. .+++|+.|+|++|.+++ +|..+..+++|+.|+|++|+
T Consensus 717 ~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------- 787 (876)
T 4ecn_A 717 LKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------- 787 (876)
T ss_dssp SSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB-------
T ss_pred hccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC-------
Confidence 332 349999999999998 7888887 99999999999999997 78889999999999999997
Q ss_pred CcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccc
Q 037111 486 NMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGL 565 (964)
Q Consensus 486 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 565 (964)
++++|++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++|+.|+|++|+|....+..|.....+
T Consensus 788 -----------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~ 853 (876)
T 4ecn_A 788 -----------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEA 853 (876)
T ss_dssp -----------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHT
T ss_pred -----------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccc
Confidence 7889999999999999999999999999999 58888876 699999999999998888888888888
Q ss_pred eEEEecCCcccc
Q 037111 566 LSIDISYNELDG 577 (964)
Q Consensus 566 ~~l~ls~N~l~~ 577 (964)
..+.|++|++..
T Consensus 854 ~~~~L~~n~~~~ 865 (876)
T 4ecn_A 854 GMYVLLYDKTQD 865 (876)
T ss_dssp TCCEEECCTTSE
T ss_pred hheeecCCCccc
Confidence 889999998765
No 25
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.1e-49 Score=467.92 Aligned_cols=480 Identities=24% Similarity=0.239 Sum_probs=351.2
Q ss_pred eEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCC
Q 037111 87 SYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGN 165 (964)
Q Consensus 87 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n 165 (964)
...|.+++.++ .+|+.+. ++|++|+|++|.+++..|..|+.+++|++|+|++|++++.+|. ++.+++|++|+|++|
T Consensus 8 ~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n 84 (549)
T 2z81_A 8 GVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDN 84 (549)
T ss_dssp SEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred ceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCC
Confidence 34677788887 5676554 6788888888888877777788888888888888877776653 777777777777777
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCC-CCCccccCCCCcchhhcccccc-cCCccccccCccccceeeccccccCCCC
Q 037111 166 HLDGPIPVSIGNLSSLVGLYLYNNSLPG-SIPSSIGNLSNLVYLFLKKNHL-RGPIPSSFGYLRKLTKLELSNNQLSGSI 243 (964)
Q Consensus 166 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l-~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 243 (964)
++++..|..|+++++|++|+|++|++++ ..|..++++++|++|++++|.+ ....+..|..+++|++|++++|++++..
T Consensus 85 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 164 (549)
T 2z81_A 85 HLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQ 164 (549)
T ss_dssp CCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEEC
T ss_pred ccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccC
Confidence 7776666667777777777777777775 3456677777777777777763 3333356666777777777777776666
Q ss_pred hhhhhcccccceeeccccccccccCCc-ccCccccceeecccccccccC--C-cccccCccccEEEeeCccCcccCCccc
Q 037111 244 PQEIGNLKLLTDLSLSQNQLRGTVPSS-LSNLSSLEILHLYDNQLSGHI--P-QEIGNFMNLNSLSVGGNQFTGFLPQNI 319 (964)
Q Consensus 244 p~~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~--~-~~~~~l~~L~~L~l~~N~l~~~~p~~~ 319 (964)
|..++.+++|++|+++.|.+. .+|.. +..+++|++|++++|++++.. | .....+++|+.|++++|.+++..+.
T Consensus 165 ~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-- 241 (549)
T 2z81_A 165 SQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFN-- 241 (549)
T ss_dssp TTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHH--
T ss_pred hhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHH--
Confidence 666666666777777666665 23332 234566666666666666421 1 1123345555555555555443222
Q ss_pred ccCCcceEEEeecccccccccccccCCCcCCeeecCCCcccccc------CcccCCCCCCcEEEccCCeecccc-----C
Q 037111 320 CQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNI------SDDFGIYPNLKLFDLSYNKFYGEL-----S 388 (964)
Q Consensus 320 ~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~------~~~~~~l~~L~~L~Ls~N~i~~~~-----~ 388 (964)
.++..+..+++|+.+++++|.+.+.. ...+..+++|+.|+++++.+.... +
T Consensus 242 ------------------~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~ 303 (549)
T 2z81_A 242 ------------------ELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLS 303 (549)
T ss_dssp ------------------HHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCC
T ss_pred ------------------HHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccch
Confidence 12233455666777777777665532 234567889999999999876432 1
Q ss_pred ccccCCCccceEeecccccCCCCCCCC-cccccCcEEeccCCcccccCC---ccccccCCcceeecccccccCCCc--hh
Q 037111 389 SNWWNCPQLGILKIAGNNITGGIPPEI-GNATQLHELDFSSNHLVGKVP---LELANLTSLNDLILNGNQLSGGIP--PE 462 (964)
Q Consensus 389 ~~~~~~~~L~~L~L~~n~i~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~---~~l~~l~~L~~L~L~~N~l~~~~~--~~ 462 (964)
..+...++|+.|++++|.++ .+|..+ ..+++|++|+|++|++++..| ..++.+++|++|+|++|++++..+ ..
T Consensus 304 ~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 382 (549)
T 2z81_A 304 TVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEI 382 (549)
T ss_dssp HHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHH
T ss_pred hhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhh
Confidence 11234578999999999998 555555 579999999999999987664 447889999999999999986543 56
Q ss_pred hhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccc
Q 037111 463 LGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLE 542 (964)
Q Consensus 463 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 542 (964)
+..+++|++|+|++|+++ .+|..+..+++|++|++++|+|++ +|..+ .++|+.|+|++|+|++.+ ..+++|+
T Consensus 383 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~ 454 (549)
T 2z81_A 383 LLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQ 454 (549)
T ss_dssp GGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCC
T ss_pred hhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhc
Confidence 889999999999999998 678889999999999999999974 44433 268999999999999643 5789999
Q ss_pred eeeccCCcCCCcccccccccccceEEEecCCcccccCCC-CccCCCCCcccccCCCCccC
Q 037111 543 KLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPS-IEAFRHAPVEALQGNKGLCG 601 (964)
Q Consensus 543 ~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~-~~~~~~~~~~~~~~n~~~c~ 601 (964)
+|+|++|+|+ .+|. ...+++|+.|||++|++++.+|. ...++.+....+.+|++.|+
T Consensus 455 ~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 455 ELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp EEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred EEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 9999999999 5665 56899999999999999998876 35667777888999999885
No 26
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=5.8e-49 Score=427.65 Aligned_cols=249 Identities=25% Similarity=0.385 Sum_probs=211.1
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
..|+..+.||+|+||+||+|+.+ +|+.||||++..... ...+.+.+|+.++++++|||||+++++|.+++..|+|||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmE 151 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 151 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 46999999999999999999765 799999999964332 233568899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
||+||+|.+++... .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.......
T Consensus 152 y~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 225 (346)
T 4fih_A 152 FLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 225 (346)
T ss_dssp CCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred CCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence 99999999999653 489999999999999999999999 999999999999999999999999999998776666
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||.. ....+.+..+.....+.. .
T Consensus 226 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~-----------~~~~~~~~~i~~~~~~~~---~ 291 (346)
T 4fih_A 226 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-----------EPPLKAMKMIRDNLPPRL---K 291 (346)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT-----------SCHHHHHHHHHHSSCCCC---S
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-----------cCHHHHHHHHHcCCCCCC---C
Confidence 66678999999999999999999999999999999999999999853 222334444433322211 1
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......++.+++.+||.+||++|||++|+++
T Consensus 292 ~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 292 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 12234456788889999999999999999875
No 27
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.4e-49 Score=422.84 Aligned_cols=247 Identities=21% Similarity=0.342 Sum_probs=211.5
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||+||+|+. .+|+.||||++.+.. ......+.+.+|++++++++|||||++++++++++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999965 479999999996432 22334577999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||++||+|.+++...+ .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+....
T Consensus 112 Ey~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred ecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999997654 489999999999999999999999 99999999999999999999999999999876443
Q ss_pred --CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 847 --SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 847 --~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||.. ....+....+....+..+
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~-----------~~~~~~~~~i~~~~~~~p- 254 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA-----------GNEGLIFAKIIKLEYDFP- 254 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHTCCCCC-
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC-----------CCHHHHHHHHHcCCCCCC-
Confidence 334567899999999999999999999999999999999999999852 233455666655554322
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIV 957 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~ev 957 (964)
.....++.+++.+||.+||++|||++|+
T Consensus 255 -----~~~s~~~~dli~~lL~~dp~~R~t~~e~ 282 (311)
T 4aw0_A 255 -----EKFFPKARDLVEKLLVLDATKRLGCEEM 282 (311)
T ss_dssp -----TTCCHHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred -----cccCHHHHHHHHHHccCCHhHCcChHHH
Confidence 1223457788889999999999999886
No 28
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=5.1e-48 Score=412.29 Aligned_cols=246 Identities=24% Similarity=0.386 Sum_probs=201.7
Q ss_pred cccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec----CceeEEEE
Q 037111 692 DESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH----ARHSFLVY 766 (964)
Q Consensus 692 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 766 (964)
+..+.||+|+||+||+|.++ +++.||||++..........+.|.+|+.++++++|||||+++++|.+ +..+|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 56678999999999999764 68899999997665556666789999999999999999999999865 35689999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCeEECC-CCceEEeccCcccccC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP--IVHRDVSSKNVLLDF-EYEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~ 843 (964)
|||+||+|.+++.+.. .+++..+..++.||+.||+|||++ + ||||||||+|||++. ++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999997653 489999999999999999999998 6 999999999999984 7999999999998643
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
. ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||.... ........+.....++.
T Consensus 184 ~--~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~----------~~~~~~~~i~~~~~~~~ 250 (290)
T 3fpq_A 184 A--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ----------NAAQIYRRVTSGVKPAS 250 (290)
T ss_dssp T--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS----------SHHHHHHHHTTTCCCGG
T ss_pred C--CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC----------cHHHHHHHHHcCCCCCC
Confidence 3 33456789999999998865 69999999999999999999999985221 12233334433333322
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. . ...+.++.+++.+||.+||++|||++|+++
T Consensus 251 ~-~---~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 251 F-D---KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp G-G---GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred C-C---ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 1 122345778889999999999999999986
No 29
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.9e-49 Score=423.81 Aligned_cols=248 Identities=25% Similarity=0.315 Sum_probs=203.2
Q ss_pred hcccccceeecCCceeEEEEEeC----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
++|++.+.||+|+||+||+|+.. +++.||||++............+.+|+.++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 47999999999999999999752 47789999997543333334568899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
|||||+||+|.+++.... .+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999997654 489999999999999999999999 999999999999999999999999999987665
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
........+||+.|||||++.+..|+.++||||+||++|||+||+.||.. ....+....+.....+.+
T Consensus 179 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~-----------~~~~~~~~~i~~~~~~~p- 246 (304)
T 3ubd_A 179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG-----------KDRKETMTMILKAKLGMP- 246 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCCC-
T ss_pred CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC-----------cCHHHHHHHHHcCCCCCC-
Confidence 55555677899999999999999999999999999999999999999852 233455666655554432
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCH-----HHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNM-----QIVC 958 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~-----~evl 958 (964)
...+.++.+++.+||.+||++|||+ +|++
T Consensus 247 -----~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil 280 (304)
T 3ubd_A 247 -----QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIK 280 (304)
T ss_dssp -----TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHH
T ss_pred -----CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHH
Confidence 1234557788899999999999985 5665
No 30
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.5e-48 Score=459.17 Aligned_cols=452 Identities=21% Similarity=0.218 Sum_probs=372.4
Q ss_pred EEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEcccc
Q 037111 63 SINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVN 142 (964)
Q Consensus 63 ~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n 142 (964)
.+++++++++. +|...+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+.+++|++|+|++|
T Consensus 4 ~l~ls~n~l~~----ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 4 LVDRSKNGLIH----VPKDLSQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp EEECTTSCCSS----CCCSCCTTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred eEecCCCCccc----ccccccccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57888888873 44445589999999999999888889999999999999999999888999999999999999999
Q ss_pred ccCCcccccCCCCCCCEEEcCCCCCCC-CCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCc--chhhcccccc--cC
Q 037111 143 HLNGSIPEIGHLSSLKNLALDGNHLDG-PIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNL--VYLFLKKNHL--RG 217 (964)
Q Consensus 143 ~l~~~~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~ 217 (964)
++++. |.. .+++|++|+|++|++++ .+|..++++++|++|++++|++++ ..+..+++| ++|++++|.+ ++
T Consensus 80 ~l~~l-p~~-~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~ 154 (520)
T 2z7x_B 80 KLVKI-SCH-PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEK 154 (520)
T ss_dssp CCCEE-ECC-CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSS
T ss_pred ceeec-Ccc-ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccc
Confidence 99954 444 89999999999999997 578999999999999999999986 467778888 9999999999 88
Q ss_pred CccccccCcc-ccceeeccccccCCCChh-hhhcccccceeeccccc-------cccccCCcccCccccceeeccccccc
Q 037111 218 PIPSSFGYLR-KLTKLELSNNQLSGSIPQ-EIGNLKLLTDLSLSQNQ-------LRGTVPSSLSNLSSLEILHLYDNQLS 288 (964)
Q Consensus 218 ~~~~~~~~l~-~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~-------l~~~~p~~l~~l~~L~~L~L~~N~l~ 288 (964)
..|..+..+. +...+++++|.+.+.++. .+..+++|+.|++++|. +.+.+| .+..+++|+.|++++|.++
T Consensus 155 ~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~ 233 (520)
T 2z7x_B 155 EDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETT 233 (520)
T ss_dssp CCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEE
T ss_pred cccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccC
Confidence 8888888876 456788999998876554 67789999999999998 777776 7899999999999999988
Q ss_pred ccCCcccc---cCccccEEEeeCccCcccCCccc-----ccCCcceEEEeeccccccccc-ccccCC---CcCCeeecCC
Q 037111 289 GHIPQEIG---NFMNLNSLSVGGNQFTGFLPQNI-----CQSGSLQYFSVHDNYFIGSLP-KTLRNC---TSLERVRLEK 356 (964)
Q Consensus 289 ~~~~~~~~---~l~~L~~L~l~~N~l~~~~p~~~-----~~~~~L~~L~l~~n~l~~~~p-~~l~~l---~~L~~L~L~~ 356 (964)
+..+..+. ..++|+.|++++|++++.+|..+ ..++.|+.+++++|.+ .+| ..+..+ .+|+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~ 311 (520)
T 2z7x_B 234 WNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSG 311 (520)
T ss_dssp HHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEES
T ss_pred HHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCC
Confidence 64332221 24689999999999999999988 8899999999999998 444 444443 5577777777
Q ss_pred CccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccc--c
Q 037111 357 NQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVG--K 434 (964)
Q Consensus 357 N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~--~ 434 (964)
|.+..... +. .+++|++|++++|.+++..|..+..+++|++|+|++|++++ .
T Consensus 312 n~l~~~~~--~~------------------------~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~ 365 (520)
T 2z7x_B 312 TRMVHMLC--PS------------------------KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSK 365 (520)
T ss_dssp SCCCCCCC--CS------------------------SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHH
T ss_pred Cccccccc--hh------------------------hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCcccc
Confidence 76654321 13 34455555555555555667777788888888888888875 4
Q ss_pred CCccccccCCcceeecccccccCCCch-hhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhc
Q 037111 435 VPLELANLTSLNDLILNGNQLSGGIPP-ELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGK 513 (964)
Q Consensus 435 ~~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 513 (964)
+|..+..+++|++|+|++|.+++.+|. .+..+++|++|+|++|++++..|..+. ++|++|++++|+|+ .+|..+..
T Consensus 366 ~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~ 442 (520)
T 2z7x_B 366 IAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVK 442 (520)
T ss_dssp HHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGG
T ss_pred chHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhc
Confidence 556788888999999999998875555 477888999999999999877776664 78999999999998 67777779
Q ss_pred cccCCeecccCccccCCCChh-cccccccceeeccCCcCCCccc
Q 037111 514 LVQLSELDLSHNLLRGEIPPE-ICNLESLEKLNLSHNNLSGSIP 556 (964)
Q Consensus 514 l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~ 556 (964)
+++|+.|+|++|+|++ +|.. |..+++|+.|+|++|++++..+
T Consensus 443 l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 443 LEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcccCC
Confidence 9999999999999994 5554 8999999999999999997654
No 31
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.1e-48 Score=424.23 Aligned_cols=249 Identities=23% Similarity=0.295 Sum_probs=203.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.+.|+..++||+|+||+||+|+.+ +|+.||||+++.... ..+|+.++++++|||||++++++.+++..|+||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm 129 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFM 129 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 456888899999999999999764 699999999974321 236999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC-ceEEeccCcccccCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-EAHVSDFGTAKLLKPD 845 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~ 845 (964)
|||+||+|.++++..+ .+++..+..++.||+.||+|||++ +||||||||+|||++.++ ++||+|||+|+.....
T Consensus 130 Ey~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp CCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred eccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 9999999999997654 489999999999999999999999 999999999999999998 6999999999877544
Q ss_pred CCC-----ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 846 SSN-----WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 846 ~~~-----~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
... ....+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .+....+.....
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~-----------~~~~~~i~~~~~ 273 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR-----------GPLCLKIASEPP 273 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC-----------SCCHHHHHHSCC
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-----------HHHHHHHHcCCC
Confidence 221 2245799999999999999999999999999999999999999863221 122233333222
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+.. .....++..+.+++.+||.+||++|||++|+++.|.
T Consensus 274 ~~~---~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~ 312 (336)
T 4g3f_A 274 PIR---EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVG 312 (336)
T ss_dssp GGG---GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Cch---hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHH
Confidence 211 112234556788899999999999999999988763
No 32
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.6e-48 Score=409.64 Aligned_cols=248 Identities=23% Similarity=0.343 Sum_probs=194.6
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
+++|++.+.||+|+||+||+|+.+ +|+.||||++.+.. ........+.+|+.++++++|||||++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 478999999999999999999764 79999999997543 2334456799999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+ +|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 92 mEy~-~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EECC-CEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred EeCC-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 9999 679999997643 499999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
. .....+||+.|||||++.+..+ +.++||||+||++|||+||+.||.. ....+....+.....+.+
T Consensus 166 ~-~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~-----------~~~~~~~~~i~~~~~~~p- 232 (275)
T 3hyh_A 166 N-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD-----------ESIPVLFKNISNGVYTLP- 232 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHTCCCCC-
T ss_pred C-ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC-----------CCHHHHHHHHHcCCCCCC-
Confidence 2 2345689999999999998886 5799999999999999999999852 223445555555444322
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....++.+++.+||++||++|||++|+++
T Consensus 233 -----~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 233 -----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -----CCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 123345778889999999999999999986
No 33
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.8e-48 Score=418.68 Aligned_cols=267 Identities=24% Similarity=0.321 Sum_probs=204.9
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc----eeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR----HSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~l 764 (964)
.+|...+.||+|+||+||+|++ +|+.||||++... ......+..|+..+.+++|||||+++|+|.+++ .+|+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 4577889999999999999988 4899999998642 222233445667778899999999999998653 5799
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhC-----CCCCeEeccCCCCCeEECCCCceEEeccCcc
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE-----CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a 839 (964)
|||||++|+|.++++.. +++|..+.+++.|+++||+|||++ ++++||||||||+|||++.++.+||+|||+|
T Consensus 79 V~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 99999999999999754 489999999999999999999976 2458999999999999999999999999999
Q ss_pred cccCCCCCC----ccccccccccccccccccC------CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC---C-CC
Q 037111 840 KLLKPDSSN----WSELAGTYGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS---L-PG 905 (964)
Q Consensus 840 ~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~---~-~~ 905 (964)
+........ .....||+.|||||++.+. .++.++|||||||++|||+||+.||.......... . ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 876544322 2245799999999998754 36789999999999999999998876443321111 1 11
Q ss_pred CChhHHHHhhhccCCCCCcc-ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 906 ANMNEAIDHMFDARLPPPWL-EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+....+......++.. .....+++..+.+++.+||+.||++||||+||++.|+
T Consensus 236 ~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 293 (303)
T 3hmm_A 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred chHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence 12223333333444333221 1223467778999999999999999999999999885
No 34
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=8.6e-48 Score=428.78 Aligned_cols=249 Identities=25% Similarity=0.382 Sum_probs=210.8
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
..|+..+.||+|+||.||+|+.+ +|+.||||++..... ...+.+.+|+.++++++|||||+++++|.+++.+|+|||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmE 228 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 228 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC--SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence 46999999999999999999764 799999999974332 233568899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
||+||+|.+++... .+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+.....
T Consensus 229 y~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~ 302 (423)
T 4fie_A 229 FLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 302 (423)
T ss_dssp CCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC
T ss_pred CCCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCc
Confidence 99999999999653 389999999999999999999999 999999999999999999999999999998776666
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||.. ....+.+..+.....+...
T Consensus 303 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~-----------~~~~~~~~~i~~~~~~~~~--- 368 (423)
T 4fie_A 303 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN-----------EPPLKAMKMIRDNLPPRLK--- 368 (423)
T ss_dssp CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT-----------SCHHHHHHHHHHSCCCCCS---
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-----------cCHHHHHHHHHcCCCCCCc---
Confidence 66678999999999999999999999999999999999999999853 2223344444333221111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......++.+++.+||..||++|||++|+++
T Consensus 369 ~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 369 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11223456778888999999999999999875
No 35
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=5.1e-48 Score=424.91 Aligned_cols=261 Identities=23% Similarity=0.366 Sum_probs=210.1
Q ss_pred HHHHHhhcccccceeecCCceeEEEEEeCC------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCC-CceeeEEee
Q 037111 683 EIIRSINNFDESFCIGRGGYGSVYKAELPS------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH-RNIVKFYGF 755 (964)
Q Consensus 683 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~ 755 (964)
+++...++|++.+.||+|+||+||+|++.. ++.||||++.... .....+.|.+|+.++++++| ||||+++|+
T Consensus 58 ~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-ChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 344445789999999999999999997542 3579999997533 34445789999999999965 999999999
Q ss_pred eecC-ceeEEEEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCC
Q 037111 756 CSHA-RHSFLVYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSS 820 (964)
Q Consensus 756 ~~~~-~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp 820 (964)
|.+. +..++|||||++|+|.++++... ...+++.++..++.|||+||+|||++ +||||||||
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~ 213 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 213 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCc
Confidence 9764 57899999999999999997532 23488999999999999999999999 999999999
Q ss_pred CCeEECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccc
Q 037111 821 KNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSS 897 (964)
Q Consensus 821 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~ 897 (964)
+|||+++++.+||+|||+|+........ .....||+.|||||++.+..|+.++|||||||++|||+| |+.||.....
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~ 293 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 293 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999877554332 234578999999999999999999999999999999998 8999853221
Q ss_pred ccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 898 LSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.......+..+..++. +..++.++.+++.+||+.||++|||++||++.|+
T Consensus 294 ----------~~~~~~~i~~g~~~~~-----p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~ 343 (353)
T 4ase_A 294 ----------DEEFCRRLKEGTRMRA-----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 343 (353)
T ss_dssp ----------SHHHHHHHHHTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----------HHHHHHHHHcCCCCCC-----CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 1122222222221111 1224456888999999999999999999999874
No 36
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=9e-47 Score=449.58 Aligned_cols=462 Identities=20% Similarity=0.198 Sum_probs=296.6
Q ss_pred eEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccc
Q 037111 62 ISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFV 141 (964)
Q Consensus 62 ~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~ 141 (964)
..++++++++++ +|...+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+.+++|++|+|++
T Consensus 34 ~~l~ls~~~L~~----ip~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTH----VPKDLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCS----CCTTSCTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCcc----CCCCCCCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 567777777664 3444457788888888888876667788888888888888888877777788888888888888
Q ss_pred cccCCcccccCCCCCCCEEEcCCCCCCC-CCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCc--chhhcccccc--c
Q 037111 142 NHLNGSIPEIGHLSSLKNLALDGNHLDG-PIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNL--VYLFLKKNHL--R 216 (964)
Q Consensus 142 n~l~~~~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~L~~N~l--~ 216 (964)
|+++..++. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++. .+..+++| ++|+|++|.+ +
T Consensus 110 N~l~~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 110 NRLQNISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp SCCCEECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCC
T ss_pred CcCCccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccc
Confidence 887744333 67778888888887775 3456777777777777777777643 33344444 7777777777 6
Q ss_pred CCccccccCcc-ccceeeccccccCCCChh-hhhcccccceeeccccc-----cccccCCcccCccccceeecccccccc
Q 037111 217 GPIPSSFGYLR-KLTKLELSNNQLSGSIPQ-EIGNLKLLTDLSLSQNQ-----LRGTVPSSLSNLSSLEILHLYDNQLSG 289 (964)
Q Consensus 217 ~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~-----l~~~~p~~l~~l~~L~~L~L~~N~l~~ 289 (964)
+..|..|..+. ..-.+++++|.+.+.++. .+..+++|+.|++++|+ +.+. ...+..+++|+.|+++++.+++
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEEEEEEEECH
T ss_pred ccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEEecCCcCcH
Confidence 66666665543 122445566665543332 33345555555555553 1111 1123344444444444443332
Q ss_pred cCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccc-----cCCCcCCeeecCCCccccccC
Q 037111 290 HIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTL-----RNCTSLERVRLEKNQLIGNIS 364 (964)
Q Consensus 290 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l-----~~l~~L~~L~L~~N~l~~~~~ 364 (964)
.. +.+.. .. ....+|++|++++|.+.+.+|..+ .+++.|+.+++..|.+ ..+.
T Consensus 264 ~~-------------------~~~~~-~~-~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-~~p~ 321 (562)
T 3a79_B 264 KC-------------------SVKLF-QF-FWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-LFSK 321 (562)
T ss_dssp HH-------------------HHHHH-HH-HTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-SSCH
T ss_pred HH-------------------HHHHH-Hh-hhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee-ecCh
Confidence 10 00000 00 011244444444444444444433 3333333333333332 1110
Q ss_pred cccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCC
Q 037111 365 DDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTS 444 (964)
Q Consensus 365 ~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 444 (964)
..+.. +....+|+.|++++|.+.... ....+++|++|++++|++++..|..+..+++
T Consensus 322 ~~~~~---------------------~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 378 (562)
T 3a79_B 322 EALYS---------------------VFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKR 378 (562)
T ss_dssp HHHHH---------------------HHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSS
T ss_pred hhhhh---------------------hhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCC
Confidence 00000 001134555555555543221 1256778888888888888778888888888
Q ss_pred cceeecccccccCC--CchhhhccCCCCceecccCccccccC-CCcccccccceecCCccccCccchhhhhccccCCeec
Q 037111 445 LNDLILNGNQLSGG--IPPELGLLTDLGYLDLSANRFSKSIP-GNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELD 521 (964)
Q Consensus 445 L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 521 (964)
|++|+|++|++++. +|..+..+++|++|+|++|++++.+| ..+..+++|++|++++|++++..|..+. ++|+.|+
T Consensus 379 L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~ 456 (562)
T 3a79_B 379 LQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLD 456 (562)
T ss_dssp CCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEE
T ss_pred CCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEE
Confidence 88888888888853 34667888899999999999887444 4578889999999999999877766554 7899999
Q ss_pred ccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCC
Q 037111 522 LSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPS 581 (964)
Q Consensus 522 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~ 581 (964)
|++|+|+ .+|..+.++++|+.|+|++|+|++..+..|..+++|+.|++++|+++|.+|.
T Consensus 457 L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 457 LHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp CCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred CCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 9999998 6777777999999999999999954444489999999999999999987663
No 37
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.8e-46 Score=404.61 Aligned_cols=250 Identities=20% Similarity=0.419 Sum_probs=192.9
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc------
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR------ 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 760 (964)
.++|++.+.||+|+||+||+|+.+ +|+.||||+++... .....+.+.+|+.++++++|||||+++++|.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 457999999999999999999764 78999999987533 3444567999999999999999999999987543
Q ss_pred ------eeEEEEEeccCCCHHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEE
Q 037111 761 ------HSFLVYEYLERGSLARILSSETA-TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV 833 (964)
Q Consensus 761 ------~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl 833 (964)
..|+|||||++|+|.+++..... ...++..++.++.||++||+|||++ +||||||||+|||++.++.+||
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEE
Confidence 37999999999999999976433 2355677889999999999999999 9999999999999999999999
Q ss_pred eccCcccccCCCCCC------------ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC
Q 037111 834 SDFGTAKLLKPDSSN------------WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS 901 (964)
Q Consensus 834 ~Dfg~a~~~~~~~~~------------~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~ 901 (964)
+|||+|+........ ....+||+.|||||++.+..|+.++||||+||++|||++ ||....
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~----- 231 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM----- 231 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----
Confidence 999999876543221 234579999999999999999999999999999999996 653111
Q ss_pred CCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 902 SLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+..+.....|+. .........+++.+||++||++|||+.|+++
T Consensus 232 -----~~~~~~~~~~~~~~p~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 232 -----ERVRTLTDVRNLKFPPL-----FTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -----HHHHHHHHHHTTCCCHH-----HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----HHHHHHHHHhcCCCCCC-----CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11123333333444322 2333445677899999999999999999986
No 38
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=6.4e-45 Score=441.48 Aligned_cols=501 Identities=23% Similarity=0.212 Sum_probs=396.2
Q ss_pred EeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCC
Q 037111 89 LDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHL 167 (964)
Q Consensus 89 L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l 167 (964)
.+=++.+++ .+|+.+. +.+++|||++|+|++..|.+|+++++|++|+|++|++++.+|. |..+++|++|+|++|+|
T Consensus 36 ~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l 112 (635)
T 4g8a_A 36 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 112 (635)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcC
Confidence 344556777 5787652 5799999999999977778899999999999999999988875 89999999999999999
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCC-ccccccCccccceeeccccccCCCChhh
Q 037111 168 DGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGP-IPSSFGYLRKLTKLELSNNQLSGSIPQE 246 (964)
Q Consensus 168 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 246 (964)
++..+..|+++++|++|+|++|++++..+..|+++++|++|+|++|.+++. .|..++.+++|++|+|++|++++..|..
T Consensus 113 ~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 192 (635)
T 4g8a_A 113 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 192 (635)
T ss_dssp CEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccc
Confidence 987778899999999999999999987778899999999999999999864 5788999999999999999999888888
Q ss_pred hhcccccc----eeeccccccccccCCcccCccccceeecccccccc-cCCcccccCccccEEEeeCccC------cccC
Q 037111 247 IGNLKLLT----DLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG-HIPQEIGNFMNLNSLSVGGNQF------TGFL 315 (964)
Q Consensus 247 ~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l------~~~~ 315 (964)
+..+.+++ .++++.|.++...+..+ ....++.+++.+|.... ..+..+..+..++...+..+.. ....
T Consensus 193 l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~ 271 (635)
T 4g8a_A 193 LRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFD 271 (635)
T ss_dssp GHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCC
T ss_pred ccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccc
Confidence 88776654 68899999996555444 45567889998886553 2233455555555554433221 1111
Q ss_pred ---------------------------CcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccC
Q 037111 316 ---------------------------PQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFG 368 (964)
Q Consensus 316 ---------------------------p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 368 (964)
+..+.....++.+.+.++.+.... .+....+|+.|++.+|.+......
T Consensus 272 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~--- 346 (635)
T 4g8a_A 272 KSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL--- 346 (635)
T ss_dssp TTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---
T ss_pred ccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCcc---
Confidence 222333445555666555554332 244455677777777766654433
Q ss_pred CCCCCcEEEccCCeeccccCccccCCCccceEeecccccCC--CCCCCCcccccCcEEeccCCcccccCCccccccCCcc
Q 037111 369 IYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITG--GIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLN 446 (964)
Q Consensus 369 ~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 446 (964)
.++.|+.++++.|.+.... .+..+++|+.|++++|.+.. ..+..+..+.+|+.|+++.|.+. ..+..+..+++|+
T Consensus 347 ~l~~L~~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~ 423 (635)
T 4g8a_A 347 KLKSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLE 423 (635)
T ss_dssp BCTTCCEEEEESCCSCCBC--CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCC
T ss_pred cchhhhhcccccccCCCCc--ccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-ccccccccccccc
Confidence 3456677777777665432 34467888888888888753 23444556778889999988886 4566788899999
Q ss_pred eeecccccccCCCc-hhhhccCCCCceecccCccccccCCCcccccccceecCCccccC-ccchhhhhccccCCeecccC
Q 037111 447 DLILNGNQLSGGIP-PELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFS-QEIPIQLGKLVQLSELDLSH 524 (964)
Q Consensus 447 ~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~ 524 (964)
.+++++|......+ ..+..+++++.++++.|.+.+..+..+..++.|+.|+|++|++. +..|..|..+++|+.|+|++
T Consensus 424 ~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~ 503 (635)
T 4g8a_A 424 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 503 (635)
T ss_dssp EEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred chhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCC
Confidence 99999888775544 56788999999999999999999999999999999999999854 45788999999999999999
Q ss_pred ccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCCCc-cC-CCCCcccccCCCCccC
Q 037111 525 NLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIE-AF-RHAPVEALQGNKGLCG 601 (964)
Q Consensus 525 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~-~~-~~~~~~~~~~n~~~c~ 601 (964)
|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|||++|++++.+|..- .+ +.+....+.+|||.|+
T Consensus 504 N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 504 CQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999888632 22 4456677899999996
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4.7e-45 Score=434.77 Aligned_cols=436 Identities=20% Similarity=0.219 Sum_probs=317.8
Q ss_pred CCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEE
Q 037111 59 GRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLH 138 (964)
Q Consensus 59 ~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 138 (964)
..++.++++++.+.+.. +..+..+++|++|+|++|++++..|..|+++++|++|+|++|.++ .+|.. .+++|++|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 52 PRTKALSLSQNSISELR-MPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TTCCEEECCSSCCCCCC-GGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCcCEEECCCCCccccC-hhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 46889999999988643 335788999999999999999988999999999999999999999 78877 899999999
Q ss_pred ccccccCCcc-c-ccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCC--cEEEEecCCC--CCCCCccccCCC-Ccchhhcc
Q 037111 139 MFVNHLNGSI-P-EIGHLSSLKNLALDGNHLDGPIPVSIGNLSSL--VGLYLYNNSL--PGSIPSSIGNLS-NLVYLFLK 211 (964)
Q Consensus 139 l~~n~l~~~~-~-~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~l~-~L~~L~L~ 211 (964)
|++|++++.. | .++.+++|++|+|++|++++ ..+..+++| ++|++++|++ ++..|..+..+. ..-.++++
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~ 204 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFH 204 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEEC
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCcccc---CchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEec
Confidence 9999999843 3 59999999999999999986 345666666 9999999999 888899888765 22256889
Q ss_pred cccccCCccc-cccCccccceeeccccc-----cCCCChhhhhcccccceeecccccccccc----CCcccCccccceee
Q 037111 212 KNHLRGPIPS-SFGYLRKLTKLELSNNQ-----LSGSIPQEIGNLKLLTDLSLSQNQLRGTV----PSSLSNLSSLEILH 281 (964)
Q Consensus 212 ~N~l~~~~~~-~~~~l~~L~~L~L~~N~-----l~~~~p~~~~~l~~L~~L~L~~N~l~~~~----p~~l~~l~~L~~L~ 281 (964)
+|.+.+.++. .+..+++|+.|++++|+ +.+ ....+..+++|+.|+++++.+++.. +..+ ..++|++|+
T Consensus 205 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~ 282 (562)
T 3a79_B 205 PNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLN 282 (562)
T ss_dssp SSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEE
T ss_pred CccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcHHHHHHHHHhh-hcccccEEE
Confidence 9998876654 57789999999999995 232 2346788899999999888876421 1111 234788888
Q ss_pred cccccccccCCccc-----ccCccccEEEeeCccCcccCCc-ccccCCcceEEEeecccccccccccccCCCcCCeeecC
Q 037111 282 LYDNQLSGHIPQEI-----GNFMNLNSLSVGGNQFTGFLPQ-NICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLE 355 (964)
Q Consensus 282 L~~N~l~~~~~~~~-----~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~ 355 (964)
+++|.+++.+|..+ ..++.|+.++++.|.+ .+|. .+... + ...+|+.|+++
T Consensus 283 l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~--------------------~-~~~~L~~L~l~ 339 (562)
T 3a79_B 283 IYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSV--------------------F-AEMNIKMLSIS 339 (562)
T ss_dssp EEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHH--------------------H-HTCCCSEEEEE
T ss_pred EeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhh--------------------h-ccCcceEEEcc
Confidence 88888887777766 5555666666655555 2221 11100 0 01334445555
Q ss_pred CCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCccccc-
Q 037111 356 KNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGK- 434 (964)
Q Consensus 356 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~- 434 (964)
+|.+..... + ..+++|++|++++|.+++..|..+.++++|++|+|++|++++.
T Consensus 340 ~n~~~~~~~--~------------------------~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 393 (562)
T 3a79_B 340 DTPFIHMVC--P------------------------PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFF 393 (562)
T ss_dssp SSCCCCCCC--C------------------------SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTT
T ss_pred CCCcccccC--c------------------------cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcc
Confidence 444432110 1 2334444555555555555566666677777777777777652
Q ss_pred -CCccccccCCcceeecccccccCCCch-hhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhh
Q 037111 435 -VPLELANLTSLNDLILNGNQLSGGIPP-ELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLG 512 (964)
Q Consensus 435 -~~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 512 (964)
+|..+..+++|++|+|++|.+++.+|. .+..+++|++|+|++|++++..|..+. ++|++|+|++|+|+ .+|..+.
T Consensus 394 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~ 470 (562)
T 3a79_B 394 KVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVT 470 (562)
T ss_dssp HHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTT
T ss_pred cchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhc
Confidence 245567777777777777777763443 466777888888888888776666554 67888888888887 5666666
Q ss_pred ccccCCeecccCccccCCCChh-cccccccceeeccCCcCCCccc
Q 037111 513 KLVQLSELDLSHNLLRGEIPPE-ICNLESLEKLNLSHNNLSGSIP 556 (964)
Q Consensus 513 ~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~ 556 (964)
.+++|+.|+|++|+|+ .+|.. +..+++|+.|+|++|++++..+
T Consensus 471 ~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 471 HLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp SSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred CCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 8888999999999988 45555 8888999999999999987654
No 40
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.5e-44 Score=399.41 Aligned_cols=253 Identities=24% Similarity=0.368 Sum_probs=201.9
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec------Cce
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH------ARH 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 761 (964)
++|++.+.||+|+||+||+|+. .+|+.||||+++.........+.+.+|+.+++.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 4799999999999999999976 479999999997655555556788999999999999999999998754 367
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
+|+|||||+ |+|.+++... ..+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeCCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeee
Confidence 899999996 6899999654 4599999999999999999999999 999999999999999999999999999987
Q ss_pred cCCC----CCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhh
Q 037111 842 LKPD----SSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF 916 (964)
Q Consensus 842 ~~~~----~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (964)
+... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||..... .+.+..+.
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~-----------~~~l~~I~ 276 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY-----------VHQLQLIM 276 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH-----------HHHHHHHH
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH-----------HHHHHHHH
Confidence 6433 2233467899999999998875 468999999999999999999999853221 11111111
Q ss_pred c--------------------------cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 917 D--------------------------ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 917 ~--------------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ...+.++ .........++.+++.+||..||++|||++|+++
T Consensus 277 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 277 MVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPW-ETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp HHHCCCCGGGTC-----CHHHHHHSSCCCCCCCH-HHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCH-HHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 1 1111111 1111122356778999999999999999999875
No 41
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.1e-43 Score=391.22 Aligned_cols=199 Identities=27% Similarity=0.364 Sum_probs=170.4
Q ss_pred HHHHhhcccccceeecCCceeEEEEEeC----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeec
Q 037111 684 IIRSINNFDESFCIGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSH 758 (964)
Q Consensus 684 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 758 (964)
+....+.|++.+.||+|+||+||+|+.+ +++.||||++... .....+.+|+++++.+ +|||||++++++.+
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT----SHPIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT----SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc----cCHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence 3344578999999999999999999653 4678999998642 2235678999999888 69999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC-CceEEeccC
Q 037111 759 ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE-YEAHVSDFG 837 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg 837 (964)
.++.|+||||++||+|.+++. .+++.+++.++.|++.||+|||++ +||||||||+|||++.+ +.+||+|||
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFG 163 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFG 163 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred CCEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCC
Confidence 999999999999999999983 388999999999999999999999 99999999999999877 799999999
Q ss_pred cccccCCCCC----------------------------CccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhC
Q 037111 838 TAKLLKPDSS----------------------------NWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKG 888 (964)
Q Consensus 838 ~a~~~~~~~~----------------------------~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg 888 (964)
+|+....... .....+||+.|+|||++.+. .|+.++||||+||++|||++|
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G 243 (361)
T 4f9c_A 164 LAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243 (361)
T ss_dssp TCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred CCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHC
Confidence 9976543221 12345799999999999875 489999999999999999999
Q ss_pred CCCCCc
Q 037111 889 QHPKDL 894 (964)
Q Consensus 889 ~~p~~~ 894 (964)
+.||..
T Consensus 244 ~~Pf~~ 249 (361)
T 4f9c_A 244 RYPFYK 249 (361)
T ss_dssp CSSSSC
T ss_pred CCCCCC
Confidence 999853
No 42
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=4.9e-43 Score=407.09 Aligned_cols=250 Identities=21% Similarity=0.257 Sum_probs=201.9
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc----CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT----GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
+++|++.+.||+|+||+||+|+.+ +|+.||||++.+.. ...........++.+++.++|||||+++++|++.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 578999999999999999999765 79999999996432 1111122233446778888999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
|+|||||+||+|.+++...+ .+++..++.++.||+.||+|||++ +||||||||+|||++.+|++||+|||+|+..
T Consensus 268 ylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeec
Confidence 99999999999999997654 489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.... ....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||..... ....+....+......
T Consensus 343 ~~~~--~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~--------~~~~~i~~~i~~~~~~ 412 (689)
T 3v5w_A 343 SKKK--PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT--------KDKHEIDRMTLTMAVE 412 (689)
T ss_dssp SSCC--CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGC--------CCHHHHHHHHHHCCCC
T ss_pred CCCC--CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHhhcCCCCC
Confidence 5433 345689999999999974 5799999999999999999999999963221 1122333444443333
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCC-----HHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPN-----MQIVC 958 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs-----~~evl 958 (964)
.+ .....++.+++.+||..||++|++ ++||+
T Consensus 413 ~p------~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 413 LP------DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp CC------TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred CC------ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence 22 123345778888999999999998 56664
No 43
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=4.2e-43 Score=403.73 Aligned_cols=420 Identities=23% Similarity=0.285 Sum_probs=226.5
Q ss_pred CcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEc
Q 037111 83 FSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLAL 162 (964)
Q Consensus 83 ~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L 162 (964)
.++|++|++++|++ |.+|++|+++++|++|++++|.++|.+|.+++.+++|+.+++..+.. .++++|++
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~----------~~l~~L~l 78 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD----------RQAHELEL 78 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH----------HTCSEEEC
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc----------cCCCEEEe
Confidence 46899999999999 79999999999999999999999999999999999986666655432 35666666
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCC
Q 037111 163 DGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGS 242 (964)
Q Consensus 163 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 242 (964)
++|++++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|++++. |.. .++|++|++++|++++
T Consensus 79 ~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~- 145 (454)
T 1jl5_A 79 NNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK- 145 (454)
T ss_dssp TTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-
T ss_pred cCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-
Confidence 6666664 3331 2566666666666664 4533 25666666666666642 211 1566777777777764
Q ss_pred ChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccC
Q 037111 243 IPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQS 322 (964)
Q Consensus 243 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 322 (964)
+| .++.+++|++|++++|++++ +|..+ .+|++|++++|++++ +| .++.+++|+.|++++|++++. |.. .
T Consensus 146 lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l-~~~---~ 214 (454)
T 1jl5_A 146 LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKL-PDL---P 214 (454)
T ss_dssp CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSC-CCC---C
T ss_pred Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcC-CCC---c
Confidence 45 46667777777777777664 44432 366777777777764 44 466677777777777776652 221 2
Q ss_pred CcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEee
Q 037111 323 GSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKI 402 (964)
Q Consensus 323 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L 402 (964)
.+|++|++++|.+. .+| .+..+++|+.|++++|++++... ..++|+.|++++|++++... ..++|+.|++
T Consensus 215 ~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~~----~~~~L~~L~l~~N~l~~l~~----~~~~L~~L~l 284 (454)
T 1jl5_A 215 LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLPD----LPPSLEALNVRDNYLTDLPE----LPQSLTFLDV 284 (454)
T ss_dssp TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCCS----CCTTCCEEECCSSCCSCCCC----CCTTCCEEEC
T ss_pred CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcccc----cccccCEEECCCCcccccCc----ccCcCCEEEC
Confidence 46667777777666 444 36677777777777777765432 23677777777777765322 1366777777
Q ss_pred cccccCCCCCCCCcccccCcEEeccCCcccccCCcccccc-CCcceeecccccccCCCchhhhccCCCCceecccCcccc
Q 037111 403 AGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANL-TSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSK 481 (964)
Q Consensus 403 ~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 481 (964)
++|.+++. +.. .++|+.|++++|++++ ++ .+ ++|++|++++|++++ +|.. +++|++|++++|++++
T Consensus 285 s~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~ 351 (454)
T 1jl5_A 285 SENIFSGL-SEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE 351 (454)
T ss_dssp CSSCCSEE-SCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred cCCccCcc-cCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc
Confidence 77777652 111 1567788888887764 22 22 477888888888875 4443 4778888888888874
Q ss_pred ccCCCcccccccceecCCccccCc--cchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCC--cccc
Q 037111 482 SIPGNMGYLLKLHYLNMSSNEFSQ--EIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSG--SIPT 557 (964)
Q Consensus 482 ~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~ 557 (964)
+|. .+++|++|++++|++++ .+|..+.. |+.|.+.+.+|.. +++|+.|++++|++++ .+|.
T Consensus 352 -lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 352 -VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp -CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC---------------------------------
T ss_pred -ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccchh
Confidence 444 36778888888888877 55655443 3346666666653 4789999999999997 5665
Q ss_pred cccccccceEEEecCCcccccCCC
Q 037111 558 NFENMHGLLSIDISYNELDGPIPS 581 (964)
Q Consensus 558 ~~~~l~~L~~l~ls~N~l~~~~~~ 581 (964)
. ++.|++++|.+.+.+|.
T Consensus 417 s------l~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 417 S------VEDLRMNSERVVDPYEF 434 (454)
T ss_dssp ------------------------
T ss_pred h------HhheeCcCcccCCcccc
Confidence 4 56677899999887764
No 44
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.2e-42 Score=401.14 Aligned_cols=373 Identities=21% Similarity=0.234 Sum_probs=235.3
Q ss_pred cCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcC-CcccCCCCcccEEEccccccCCcccc-cCCCCCCCE
Q 037111 82 LFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKI-PSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKN 159 (964)
Q Consensus 82 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~ 159 (964)
..++|++|||++|.+++..|..|+++++|++|+|++|.+.+.+ |..|+.+++|++|+|++|.+++.+|. ++.+++|++
T Consensus 28 l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 107 (455)
T 3v47_A 28 LPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEV 107 (455)
T ss_dssp CCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCE
T ss_pred CCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCE
Confidence 4478999999999998888888999999999999999887666 45678888888888888888776553 777788888
Q ss_pred EEcCCCCCCCCCCCC--CCCCCCCcEEEEecCCCCCCCCcc-ccCCCCcchhhcccccccCCccccccCc--cccceeec
Q 037111 160 LALDGNHLDGPIPVS--IGNLSSLVGLYLYNNSLPGSIPSS-IGNLSNLVYLFLKKNHLRGPIPSSFGYL--RKLTKLEL 234 (964)
Q Consensus 160 L~L~~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L 234 (964)
|+|++|++++.+|.. ++++++|++|+|++|++++..|.. ++++++|++|+|++|++++..+..+..+ .+|+.|++
T Consensus 108 L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l 187 (455)
T 3v47_A 108 LTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRL 187 (455)
T ss_dssp EECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEEC
T ss_pred EeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccc
Confidence 888888877654444 777777777777777777666655 6777777777777777777666666655 56677777
Q ss_pred cccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccC---ccccEEEeeCccC
Q 037111 235 SNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNF---MNLNSLSVGGNQF 311 (964)
Q Consensus 235 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~l~~N~l 311 (964)
++|.+.+..+..++. .....+..+++|++|++++|++++..|..+..+ .+|+.|++++|.+
T Consensus 188 ~~n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~ 251 (455)
T 3v47_A 188 SSITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYN 251 (455)
T ss_dssp TTCBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTT
T ss_pred ccCcccccchhhccc----------------cccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccc
Confidence 777666543332210 000012233444444444444444444433332 4455555555443
Q ss_pred cccCCcccccCCcceEEEeecccccccccccccC--CCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCc
Q 037111 312 TGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRN--CTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSS 389 (964)
Q Consensus 312 ~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~ 389 (964)
.+.... .+.+....+..+.. .++|+.|++++|.+++..+..|..+++|+.|+|++|++++..+.
T Consensus 252 ~~~~~~--------------~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 317 (455)
T 3v47_A 252 MGSSFG--------------HTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDN 317 (455)
T ss_dssp TSCCTT--------------CCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTT
T ss_pred cccccc--------------hhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChh
Confidence 322110 01111111111221 24555555555555555555555556666666666666555555
Q ss_pred cccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCC
Q 037111 390 NWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDL 469 (964)
Q Consensus 390 ~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 469 (964)
.|.++++|++|+|++|.+++..+..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|
T Consensus 318 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 397 (455)
T 3v47_A 318 AFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSL 397 (455)
T ss_dssp TTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred HhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcc
Confidence 55566666666666666655556666667777777777777766666677777777777777777776555566677777
Q ss_pred CceecccCccccccC
Q 037111 470 GYLDLSANRFSKSIP 484 (964)
Q Consensus 470 ~~L~Ls~N~l~~~~~ 484 (964)
++|+|++|++++..|
T Consensus 398 ~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 398 QKIWLHTNPWDCSCP 412 (455)
T ss_dssp CEEECCSSCBCCCTT
T ss_pred cEEEccCCCcccCCC
Confidence 777777777765544
No 45
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2e-43 Score=387.15 Aligned_cols=292 Identities=31% Similarity=0.543 Sum_probs=164.8
Q ss_pred CCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCce--eeceEeCCC---CCeeEEecCCCCCCC--ccCCC
Q 037111 6 ASNSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCT--WSGISCNHA---GRIISINLTSTSLKG--TLDQF 78 (964)
Q Consensus 6 ~~~~~~~~~all~~k~~~~~~~~~~l~sW~~~~~~~~~~~~~C~--w~gv~C~~~---~~v~~l~l~~~~l~g--~l~~~ 78 (964)
+.|..+|++||++||+++.+ |. .+++|..+ ++||. |.||+|+.. ++|+.++|+++.+.| .++.
T Consensus 1 ~~c~~~~~~aL~~~k~~~~~-~~-~l~~W~~~-------~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~- 70 (313)
T 1ogq_A 1 ELCNPQDKQALLQIKKDLGN-PT-TLSSWLPT-------TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPS- 70 (313)
T ss_dssp CCSCHHHHHHHHHHHHHTTC-CG-GGTTCCTT-------SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCG-
T ss_pred CCCCHHHHHHHHHHHHhcCC-cc-cccCCCCC-------CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccCh-
Confidence 36899999999999999964 44 78999743 67898 999999854 567666666666555 3332
Q ss_pred ccCcCcceeEEeccC-CccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCC
Q 037111 79 PFSLFSHLSYLDLNE-NQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSS 156 (964)
Q Consensus 79 ~~~~~~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~ 156 (964)
.+..+++|++|+|++ |++++.+|..|+++++|++|+|++|.+++.+|..++.+++|++|+|++|.+++.+|. ++.+++
T Consensus 71 ~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 150 (313)
T 1ogq_A 71 SLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150 (313)
T ss_dssp GGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTT
T ss_pred hHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCC
Confidence 344455555555553 555555555555555555555555555555555555555555555555555544442 455555
Q ss_pred CCEEEcCCCCCCCCCCCCCCCCC-CCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeecc
Q 037111 157 LKNLALDGNHLDGPIPVSIGNLS-SLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELS 235 (964)
Q Consensus 157 L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 235 (964)
|++|+|++|++++.+|..++.++ +|++|++++|++++.+|..++.++ |++|+|++|++++..|..|..+++|++|+|+
T Consensus 151 L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 229 (313)
T 1ogq_A 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLA 229 (313)
T ss_dssp CCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECC
T ss_pred CCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECC
Confidence 55555555555555555555554 555555555555555555555444 5555555555555455555555555555555
Q ss_pred ccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCcc
Q 037111 236 NNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQ 310 (964)
Q Consensus 236 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 310 (964)
+|++++.+|. +..+++|++|+|++|++++.+|..+..+++|++|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 230 ~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 230 KNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp SSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred CCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 5555433332 444455555555555555444544555555555555555555444443 444445555555444
No 46
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2e-42 Score=401.50 Aligned_cols=393 Identities=21% Similarity=0.214 Sum_probs=306.9
Q ss_pred CCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCc-cccccCccccceeecc
Q 037111 157 LKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPI-PSSFGYLRKLTKLELS 235 (964)
Q Consensus 157 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~ 235 (964)
-+.++.++++++ .+|. + .++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ +..|..+++|++|+|+
T Consensus 12 ~~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 12 GYNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp TTEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred ccccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 356888899988 5666 3 278999999999999888999999999999999999987554 5678999999999999
Q ss_pred ccccCCCChhhhhcccccceeeccccccccccCCc--ccCccccceeecccccccccCCcc-cccCccccEEEeeCccCc
Q 037111 236 NNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSS--LSNLSSLEILHLYDNQLSGHIPQE-IGNFMNLNSLSVGGNQFT 312 (964)
Q Consensus 236 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--l~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~l~~N~l~ 312 (964)
+|++++..|..|+++++|++|+|++|++++.+|.. +..+++|++|+|++|++++..|.. +..+++|+.|++++|+++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 88 YNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp TCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred CCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 99999888889999999999999999998755444 888999999999999998777765 788999999999999998
Q ss_pred ccCCcccccC--CcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCcc
Q 037111 313 GFLPQNICQS--GSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSN 390 (964)
Q Consensus 313 ~~~p~~~~~~--~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~ 390 (964)
+..+..+..+ ..++.|++++|.+.+..+..+.. .....+..+++|+.|++++|++++..+..
T Consensus 168 ~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~ 231 (455)
T 3v47_A 168 SICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKR 231 (455)
T ss_dssp CCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHH
T ss_pred ccChhhhhccccccccccccccCcccccchhhccc----------------cccccccccceeeeEecCCCcccccchhh
Confidence 8877776654 56666666666655433322210 00011223455666666666665544443
Q ss_pred ccCC---CccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCcccccc--CCcceeecccccccCCCchhhhc
Q 037111 391 WWNC---PQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANL--TSLNDLILNGNQLSGGIPPELGL 465 (964)
Q Consensus 391 ~~~~---~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~ 465 (964)
+... .+|+.|++++|.+.+.. +..+.+.+..+..+..+ ++|+.|++++|.+++..|..++.
T Consensus 232 ~~~~~~~~~L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 297 (455)
T 3v47_A 232 FFDAIAGTKIQSLILSNSYNMGSS--------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSH 297 (455)
T ss_dssp HHHHTTTCCEEEEECTTCTTTSCC--------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTT
T ss_pred hhccccccceeeEeeccccccccc--------------cchhhhccCcccccccccccCceEEEecCccccccchhhccc
Confidence 3322 55666666666544221 11222222233333333 68889999999998888888899
Q ss_pred cCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceee
Q 037111 466 LTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLN 545 (964)
Q Consensus 466 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 545 (964)
+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|+.+++|+.|+|++|++++..|..|.++++|++|+
T Consensus 298 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 377 (455)
T 3v47_A 298 FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELA 377 (455)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEE
Confidence 99999999999999988888999999999999999999888899999999999999999999988899999999999999
Q ss_pred ccCCcCCCcccccccccccceEEEecCCcccccCCCCc
Q 037111 546 LSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIE 583 (964)
Q Consensus 546 Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~ 583 (964)
|++|+|++..+..|..+++|+.|++++|+++|.+|...
T Consensus 378 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 378 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred CCCCccccCCHhHhccCCcccEEEccCCCcccCCCcch
Confidence 99999998888888999999999999999999998654
No 47
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.4e-42 Score=405.04 Aligned_cols=252 Identities=21% Similarity=0.332 Sum_probs=212.0
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||+||+|+.+ +|+.||+|++... .......+.+|+.+|+.++|||||+++++|.+++.+|+||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~--~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP--HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc--chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 468999999999999999999764 7999999998643 3344567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC--CceEEeccCcccccCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE--YEAHVSDFGTAKLLKP 844 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~--~~~kl~Dfg~a~~~~~ 844 (964)
|||+||+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+..
T Consensus 234 E~~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 234 EFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp ECCCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred eecCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 9999999999996433 3589999999999999999999999 99999999999999864 8999999999988764
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||.. ....+.+..+.......+.
T Consensus 310 ~~-~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~-----------~~~~~~~~~i~~~~~~~~~ 377 (573)
T 3uto_A 310 KQ-SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG-----------ENDDETLRNVKSCDWNMDD 377 (573)
T ss_dssp TS-EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC-----------SSHHHHHHHHHTTCCCCCS
T ss_pred CC-ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-----------cCHHHHHHHHHhCCCCCCc
Confidence 43 33456899999999999999999999999999999999999999752 3334555555544433221
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........++.+++.+||..||++|||++|+++
T Consensus 378 --~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 378 --SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp --GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112233456778889999999999999999986
No 48
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.1e-42 Score=397.81 Aligned_cols=406 Identities=24% Similarity=0.257 Sum_probs=255.0
Q ss_pred CccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCC
Q 037111 101 PSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLS 179 (964)
Q Consensus 101 p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 179 (964)
|+.+ ..+.|++|++++|.+ |.+|++++.+++|++|++++|.++|.+|. ++.+++|+.++++.|.. .
T Consensus 5 p~~~-~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~ 71 (454)
T 1jl5_A 5 PRNV-SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------R 71 (454)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------H
T ss_pred cccc-ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------c
Confidence 4444 468999999999999 79999999999999999999999877664 78888888887776652 5
Q ss_pred CCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeecc
Q 037111 180 SLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLS 259 (964)
Q Consensus 180 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 259 (964)
++++|++++|.+++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|++++. |.. .++|++|+++
T Consensus 72 ~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~ 139 (454)
T 1jl5_A 72 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVS 139 (454)
T ss_dssp TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECC
T ss_pred CCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECc
Confidence 68999999999995 4542 3689999999999997 5643 47899999999999853 321 2689999999
Q ss_pred ccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccc
Q 037111 260 QNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSL 339 (964)
Q Consensus 260 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~ 339 (964)
+|++++ +| .+.++++|++|++++|++++ +|..+ .+|+.|++++|++++ +| .+..+++|++|++++|.+.+ +
T Consensus 140 ~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l 210 (454)
T 1jl5_A 140 NNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-L 210 (454)
T ss_dssp SSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-C
T ss_pred CCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-C
Confidence 999995 77 58999999999999999985 56543 589999999999987 44 57888888888888888876 3
Q ss_pred cccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccc
Q 037111 340 PKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNAT 419 (964)
Q Consensus 340 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~ 419 (964)
|... ++|+.|++++|.++.++ .+..+++|+.|++++|++++... .+++|+.|++++|.+++ +|.. .+
T Consensus 211 ~~~~---~~L~~L~l~~n~l~~lp--~~~~l~~L~~L~l~~N~l~~l~~----~~~~L~~L~l~~N~l~~-l~~~---~~ 277 (454)
T 1jl5_A 211 PDLP---LSLESIVAGNNILEELP--ELQNLPFLTTIYADNNLLKTLPD----LPPSLEALNVRDNYLTD-LPEL---PQ 277 (454)
T ss_dssp CCCC---TTCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSSCCS----CCTTCCEEECCSSCCSC-CCCC---CT
T ss_pred CCCc---CcccEEECcCCcCCccc--ccCCCCCCCEEECCCCcCCcccc----cccccCEEECCCCcccc-cCcc---cC
Confidence 3322 47888888888887543 37788888888888888876332 23677888888887775 3333 36
Q ss_pred cCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhcc-CCCCceecccCccccccCCCcccccccceecC
Q 037111 420 QLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLL-TDLGYLDLSANRFSKSIPGNMGYLLKLHYLNM 498 (964)
Q Consensus 420 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 498 (964)
+|++|++++|++++. |.. .++|+.|++++|++++. + .+ ++|++|++++|++++ +|.. +++|++|++
T Consensus 278 ~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L 344 (454)
T 1jl5_A 278 SLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIA 344 (454)
T ss_dssp TCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEEC
T ss_pred cCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCcCCEEEC
Confidence 777888888877752 211 15777778887777642 2 22 477777777777765 4433 467777777
Q ss_pred CccccCccchhhhhccccCCeecccCccccC--CCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCccc
Q 037111 499 SSNEFSQEIPIQLGKLVQLSELDLSHNLLRG--EIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELD 576 (964)
Q Consensus 499 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~ 576 (964)
++|++++ +|. .+++|+.|++++|++++ .+|..+.. |+.|.+.+.+|.. +++|+.||+++|+++
T Consensus 345 ~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~ 409 (454)
T 1jl5_A 345 SFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLR 409 (454)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC--------------------------
T ss_pred CCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCC
Confidence 7777764 444 35777777777777776 45554432 2346666666653 478999999999999
Q ss_pred c--cCCC
Q 037111 577 G--PIPS 581 (964)
Q Consensus 577 ~--~~~~ 581 (964)
+ .+|.
T Consensus 410 ~~~~iP~ 416 (454)
T 1jl5_A 410 EFPDIPE 416 (454)
T ss_dssp -------
T ss_pred ccccchh
Confidence 8 5663
No 49
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.3e-41 Score=376.08 Aligned_cols=284 Identities=35% Similarity=0.625 Sum_probs=227.9
Q ss_pred CcccHHHHHHHhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeee
Q 037111 677 GKLVYEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC 756 (964)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 756 (964)
..+.+.++....++|+..+.||+|+||.||+|+.++++.||||++...... .....+.+|+.+++.++||||+++++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc-hHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 456778888999999999999999999999999888999999998753322 2223688999999999999999999999
Q ss_pred ecCceeEEEEEeccCCCHHHHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEe
Q 037111 757 SHARHSFLVYEYLERGSLARILSSET--ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVS 834 (964)
Q Consensus 757 ~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~ 834 (964)
.+.+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999997643 3348999999999999999999999877789999999999999999999999
Q ss_pred ccCcccccCCCCCC-ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 835 DFGTAKLLKPDSSN-WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 835 Dfg~a~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
|||+++........ .....||+.|+|||.+.+..++.++||||||+++|||++|+.||+........ .........
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~ 253 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD---DVMLLDWVK 253 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTS---CSBHHHHHT
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccccccccccc---chhHHHHHH
Confidence 99999876544332 33456999999999999889999999999999999999999999643221110 111111111
Q ss_pred hhhcc-----CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcCC
Q 037111 914 HMFDA-----RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSGQ 964 (964)
Q Consensus 914 ~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~~ 964 (964)
..... ............+.+..+.+++.+||+.||++|||+++|++.|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 11111 1111111223467788899999999999999999999999999753
No 50
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6.2e-41 Score=369.74 Aligned_cols=269 Identities=33% Similarity=0.543 Sum_probs=218.4
Q ss_pred HHHHhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 684 IIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 684 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
+....++|+..+.||+|+||.||+|+.++++.||||++... .....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 34 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (321)
T 2qkw_B 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI 111 (321)
T ss_dssp CCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC--CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCE
T ss_pred HHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE
Confidence 34466789999999999999999999888999999998643 2334578899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 764 LVYEYLERGSLARILSSET--ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
+||||+++|+|.+++.... ...+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 112 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 188 (321)
T 2qkw_B 112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKK 188 (321)
T ss_dssp EEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEE
T ss_pred EEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccccc
Confidence 9999999999999996543 23589999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCC--CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHH-Hhh---
Q 037111 842 LKPDS--SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI-DHM--- 915 (964)
Q Consensus 842 ~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~--- 915 (964)
..... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||........ ....+.. ...
T Consensus 189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 189 GTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM-----VNLAEWAVESHNNG 263 (321)
T ss_dssp CSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSC-----CCHHHHTHHHHTTT
T ss_pred cccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHH-----HHHHHHhhhccccc
Confidence 54322 222344689999999999999999999999999999999999999864332111 1111111 111
Q ss_pred -hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 916 -FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 916 -~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
......+........+.+..+.+++.+||+.||++|||++||++.|+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311 (321)
T ss_dssp CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11111122222334678888999999999999999999999999886
No 51
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=7e-41 Score=368.81 Aligned_cols=249 Identities=24% Similarity=0.414 Sum_probs=213.0
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+. .+|+.||||++..........+.+.+|+.+++.++||||+++++++...+..|+||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46899999999999999999976 58999999999765555566678899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 94 e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp CCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred ECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 9999999999997653 488999999999999999999999 99999999999999999999999999998765432
Q ss_pred CCccccccccccccccccccCCCC-cchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~-~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
......||+.|+|||.+.+..++ .++||||+||++|||++|+.||.. ....+....+.......+.
T Consensus 169 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~-----------~~~~~~~~~i~~~~~~~p~- 235 (328)
T 3fe3_A 169 -KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-----------QNLKELRERVLRGKYRIPF- 235 (328)
T ss_dssp -GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCCCT-
T ss_pred -ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCC-----------CCHHHHHHHHHhCCCCCCC-
Confidence 34556799999999999888775 799999999999999999999753 2334555555555444331
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....++.+++.+||..||++|||++|+++
T Consensus 236 -----~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 236 -----YMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp -----TSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred -----CCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 12345778889999999999999999975
No 52
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.4e-41 Score=367.96 Aligned_cols=258 Identities=31% Similarity=0.448 Sum_probs=203.9
Q ss_pred HHhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
...++|++.+.||+|+||+||+|+. +|+.||||++............+.+|+.++++++||||+++++++.+....++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3457899999999999999999987 588999999976655566667899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 766 YEYLERGSLARILSSETA-TEMDWSKRVNVIKGVAHALSYMHHECRPP--IVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
|||+++|+|.+++..... ..+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 999999999999975432 2388999999999999999999999 8 999999999999999999999999999866
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
...........||+.|+|||.+.+..++.++||||||+++|||++|+.||.... ..+....+.......
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~-----------~~~~~~~~~~~~~~~ 258 (309)
T 3p86_A 190 ASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN-----------PAQVVAAVGFKCKRL 258 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC-----------HHHHHHHHHHSCCCC
T ss_pred cccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHHhcCCCC
Confidence 554444455679999999999999999999999999999999999999985322 222222221111111
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.. .......+.+++.+||+.||++|||++++++.|+
T Consensus 259 ~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 259 EI----PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294 (309)
T ss_dssp CC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 10 1223456788999999999999999999999885
No 53
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=6e-40 Score=360.00 Aligned_cols=255 Identities=27% Similarity=0.474 Sum_probs=208.6
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||+||+|... +++.||+|++.. ......+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 86 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR--FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT 86 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence 357999999999999999999764 689999999854 34555678999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 87 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 87 EYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp ECCTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred EecCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 9999999999997643 4589999999999999999999999 99999999999999999999999999998765432
Q ss_pred CCc--------------cccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHH
Q 037111 847 SNW--------------SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912 (964)
Q Consensus 847 ~~~--------------~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 912 (964)
... ....||+.|+|||.+.+..++.++||||||+++|||++|..|+......... .........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~--~~~~~~~~~ 240 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD--FGLNVRGFL 240 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT--SSBCHHHHH
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH--Hhhhhhccc
Confidence 211 1457999999999999999999999999999999999999997643322111 111122222
Q ss_pred HhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 913 DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
........ +..+.+++.+||+.||++|||++++++.|+
T Consensus 241 ~~~~~~~~------------~~~l~~li~~~l~~dP~~Rps~~~l~~~L~ 278 (310)
T 3s95_A 241 DRYCPPNC------------PPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278 (310)
T ss_dssp HHTCCTTC------------CTTHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cccCCCCC------------CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 22222222 234788999999999999999999999885
No 54
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.6e-40 Score=358.83 Aligned_cols=250 Identities=24% Similarity=0.407 Sum_probs=209.4
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||+||+|.. .+++.||||++.... ......+.+|+.++++++||||+++++++..++..++||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc--ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 35799999999999999999975 578999999986432 233467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 97 e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 97 EYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp ECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred ECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 999999999999754 388999999999999999999999 99999999999999999999999999998877665
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
.......||+.|+|||.+.+..++.++||||+||++|||++|+.||.... .......+.....+...
T Consensus 171 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----------~~~~~~~~~~~~~~~~~-- 237 (297)
T 3fxz_A 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN-----------PLRALYLIATNGTPELQ-- 237 (297)
T ss_dssp CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----------HHHHHHHHHHHCSCCCS--
T ss_pred cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHHhCCCCCCC--
Confidence 55566789999999999999999999999999999999999999985321 12222222222211111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+.+++.+||+.||++|||++|+++
T Consensus 238 -~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 238 -NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp -CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -CccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 11234456788899999999999999999975
No 55
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.2e-40 Score=362.75 Aligned_cols=250 Identities=22% Similarity=0.292 Sum_probs=210.2
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+.+ +|+.||+|++.+.. ........+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 468999999999999999999765 68999999986432 1233456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||++||+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 ~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred EeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 99999999999997643 488999999999999999999999 9999999999999999999999999999875544
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
........||+.|+|||++.+..++.++||||+||++|||++|+.||.. ....+....+.......+
T Consensus 159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-----------~~~~~~~~~i~~~~~~~p-- 225 (337)
T 1o6l_A 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-----------QDHERLFELILMEEIRFP-- 225 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCCC--
T ss_pred CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCC-----------CCHHHHHHHHHcCCCCCC--
Confidence 4455567899999999999999999999999999999999999999852 222344444444333322
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
.....++.+++.+||+.||++|| +++|+++
T Consensus 226 ----~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 226 ----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp ----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ----CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 12334577888899999999999 8888864
No 56
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.8e-40 Score=369.88 Aligned_cols=255 Identities=23% Similarity=0.396 Sum_probs=209.2
Q ss_pred hhcccccceeecCCceeEEEEEeC--------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeec
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP--------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSH 758 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 758 (964)
.++|++.+.||+|+||.||+|+.. ++..||||+++.. ........+.+|+.+++++ +||||+++++++.+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 467999999999999999999752 3457999998753 3344567899999999999 89999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeE
Q 037111 759 ARHSFLVYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVL 824 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nil 824 (964)
.+..|+||||+++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+||+
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEE
Confidence 999999999999999999997643 23478999999999999999999999 9999999999999
Q ss_pred ECCCCceEEeccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCC
Q 037111 825 LDFEYEAHVSDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDS 901 (964)
Q Consensus 825 l~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~ 901 (964)
++.++.+||+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~------ 309 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI------ 309 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC------
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC------
Confidence 99999999999999986654332 2233457889999999999999999999999999999999 99997532
Q ss_pred CCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 902 SLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...+....+.....+.. ...+...+.+++.+||+.||++||++.|+++.|+
T Consensus 310 -----~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~ 360 (370)
T 2psq_A 310 -----PVEELFKLLKEGHRMDK-----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 360 (370)
T ss_dssp -----CGGGHHHHHHTTCCCCC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----CHHHHHHHHhcCCCCCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 12233333322221111 1234456888999999999999999999999885
No 57
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.9e-39 Score=357.18 Aligned_cols=262 Identities=24% Similarity=0.380 Sum_probs=215.1
Q ss_pred CCcccHHHHHHHhhc----------ccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC
Q 037111 676 EGKLVYEEIIRSINN----------FDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV 744 (964)
Q Consensus 676 ~~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l 744 (964)
.+.++++++..+++. |+..+.||+|+||.||+|+.+ +|+.||||++.... ......+.+|+.+++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l 99 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--QQRRELLFNEVVIMRDY 99 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--CCSHHHHHHHHHHHTTC
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc--hhHHHHHHHHHHHHHhC
Confidence 345677777777653 777889999999999999876 79999999986432 33456788999999999
Q ss_pred CCCceeeEEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeE
Q 037111 745 RHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVL 824 (964)
Q Consensus 745 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nil 824 (964)
+||||+++++++...+..++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl 173 (321)
T 2c30_A 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSIL 173 (321)
T ss_dssp CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence 999999999999999999999999999999999854 3489999999999999999999999 9999999999999
Q ss_pred ECCCCceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCC
Q 037111 825 LDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLP 904 (964)
Q Consensus 825 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~ 904 (964)
++.++.+||+|||++..............||+.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 174 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~-------- 245 (321)
T 2c30_A 174 LTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS-------- 245 (321)
T ss_dssp ECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------
T ss_pred ECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------
Confidence 999999999999999877655444556689999999999999999999999999999999999999985321
Q ss_pred CCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 905 GANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+....+.....+... ........+.+++.+||+.||++|||++++++
T Consensus 246 ---~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 246 ---PVQAMKRLRDSPPPKLK---NSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp ---HHHHHHHHHHSSCCCCT---TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---HHHHHHHHhcCCCCCcC---ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 22333333332222111 11233456788899999999999999999986
No 58
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=365.81 Aligned_cols=249 Identities=25% Similarity=0.374 Sum_probs=200.3
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||+||+|+. .+|+.||||++...... .....+.+|+.++++++||||+++++++.+.+..++||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 46899999999999999999975 57999999998754322 22356889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... .+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 88 E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 162 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK 162 (347)
T ss_dssp ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC-----
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC
Confidence 9999999999997654 489999999999999999999999 99999999999999999999999999997655432
Q ss_pred -CCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 847 -SNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 847 -~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||+. ....+....+.......+.
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~-----------~~~~~~~~~i~~~~~~~p~ 231 (347)
T 3zgw_A 163 DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD-----------DNVMALYKKIMRGKYDVPK 231 (347)
T ss_dssp ---------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHTCCCCCT
T ss_pred CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCC-----------CCHHHHHHHHHcCCCCCCC
Confidence 23345679999999999988775 8899999999999999999999853 2233444555544443221
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+.+++.+||..||++|||++|+++
T Consensus 232 ------~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 232 ------WLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp ------TCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------CCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 12345678889999999999999999985
No 59
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.4e-39 Score=356.59 Aligned_cols=259 Identities=22% Similarity=0.336 Sum_probs=204.5
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|++.+.||+|+||+||+|+.++|+.||+|++............+.+|+.++++++||||+++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46899999999999999999998889999999997554444455778899999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 174 (311)
T 3niz_A 100 FMEK-DLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174 (311)
T ss_dssp CCSE-EHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC
T ss_pred CCCC-CHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCcc
Confidence 9985 8888886543 4589999999999999999999999 999999999999999999999999999987765555
Q ss_pred Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc--
Q 037111 848 NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW-- 924 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 924 (964)
......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||....... ....+........+..+
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~i~~~~~~~~~~~~~~ 246 (311)
T 3niz_A 175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD--------QLPKIFSILGTPNPREWPQ 246 (311)
T ss_dssp ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT--------HHHHHHHHHCCCCTTTSGG
T ss_pred cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH--------HHHHHHHHHCCCChHHhhh
Confidence 5556678999999999876 568999999999999999999999986432211 11111111111111110
Q ss_pred -------------------cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 -------------------LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 -------------------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..........++.+++.+||+.||++|||++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp GTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00111123356788999999999999999999986
No 60
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=9.5e-40 Score=373.61 Aligned_cols=255 Identities=18% Similarity=0.272 Sum_probs=212.9
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
..++|++.+.||+|+||+||+|.. .+|+.||+|++............+.+|+.+++.++||||+++++++.+++..|+|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 456899999999999999999965 4788999999976555555567899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC---CCCceEEeccCccccc
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD---FEYEAHVSDFGTAKLL 842 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~---~~~~~kl~Dfg~a~~~ 842 (964)
|||++||+|.+++.... .+++..+..++.||+.|++|||++ +|+||||||+||+++ .++.+||+|||++...
T Consensus 89 ~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp ECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 99999999999997653 489999999999999999999999 999999999999998 4678999999999877
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
...........||+.|+|||++.+..++.++||||+||++|+|++|+.||.. ....+....+.......
T Consensus 164 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~-----------~~~~~~~~~i~~~~~~~ 232 (444)
T 3soa_A 164 EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD-----------EDQHRLYQQIKAGAYDF 232 (444)
T ss_dssp CTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCC-----------SSHHHHHHHHHHTCCCC
T ss_pred cCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC-----------ccHHHHHHHHHhCCCCC
Confidence 6655555567899999999999998999999999999999999999999752 22334444444443332
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+. .........+.+++.+||+.||++|||+.|+++
T Consensus 233 ~~--~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 233 PS--PEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp CT--TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred Cc--cccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 11 111233456788899999999999999999986
No 61
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.4e-40 Score=363.63 Aligned_cols=268 Identities=24% Similarity=0.366 Sum_probs=209.3
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc----eeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR----HSF 763 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~ 763 (964)
.++|++.+.||+|+||+||+|+.. ++.||||++... ......+..|+.++++++||||+++++++.... ..+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC---chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 458999999999999999999886 889999998642 233445667999999999999999999998744 479
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhC-------CCCCeEeccCCCCCeEECCCCceEEecc
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE-------CRPPIVHRDVSSKNVLLDFEYEAHVSDF 836 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-------~~~~iiH~dlkp~Nill~~~~~~kl~Df 836 (964)
+||||+++|+|.+++... .+++..+..++.|+++||+|||+. +.++|+||||||+||+++.++.+||+||
T Consensus 99 lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 999999999999999654 389999999999999999999976 2348999999999999999999999999
Q ss_pred CcccccCCCCC--Ccccccccccccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCC-----
Q 037111 837 GTAKLLKPDSS--NWSELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLP----- 904 (964)
Q Consensus 837 g~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~-----~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~----- 904 (964)
|+++....... ......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||..........+.
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 99987654432 2234578999999999886 34667899999999999999999998754332221111
Q ss_pred CCChhHHHHhhhccCCCCCcc-ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 905 GANMNEAIDHMFDARLPPPWL-EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.................+... .......+..+.+++.+||+.||++|||+++|++.|+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 314 (322)
T 3soc_A 256 HPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERIT 314 (322)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111222233333333222211 1123356677999999999999999999999999986
No 62
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.1e-39 Score=356.63 Aligned_cols=257 Identities=25% Similarity=0.415 Sum_probs=203.8
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||.||+|+.. ..+|+|+++.........+.+.+|+.++++++||||+++++++.. +..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEe
Confidence 357999999999999999999864 469999987655566667889999999999999999999998754 56899999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC--
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD-- 845 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 845 (964)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred cCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 999999999996543 4589999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCCccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 846 SSNWSELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
........||+.|+|||.+. +..++.++||||||+++|||++|+.||..... .+............
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~-----------~~~~~~~~~~~~~~ 256 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN-----------RDQIIFMVGRGYAS 256 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----------HHHHHHHHHHTCCC
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc-----------HHHHHHHHhcCCCC
Confidence 22334557999999999986 66789999999999999999999999853221 12222222211111
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+........++..+.+++.+||+.||++||++.+|++.|+
T Consensus 257 ~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~ 296 (307)
T 3lb7_A 257 PDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp CCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHH
T ss_pred cchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHH
Confidence 1111222344567889999999999999999999999875
No 63
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=7.6e-40 Score=361.04 Aligned_cols=254 Identities=26% Similarity=0.426 Sum_probs=206.5
Q ss_pred hhcccccceeecCCceeEEEEEeC----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
.++|++.+.||+|+||.||+|+.. .+..||||+++... .....+.+.+|+.++++++||||+++++++.+++..+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 357889999999999999999774 34459999987532 3445578999999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 127 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 9999999999999996543 3589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 844 PDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 844 ~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
..... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||... ...+....+....
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~-----------~~~~~~~~~~~~~ 271 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM-----------TNRDVISSVEEGY 271 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTS-----------CHHHHHHHHHTTC
T ss_pred cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccC-----------CHHHHHHHHHcCC
Confidence 44322 122345778999999998899999999999999999999 99997532 2233333333322
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+. ...++..+.+++.+||+.||++|||+++|++.|+
T Consensus 272 ~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~ 309 (325)
T 3kul_A 272 RLPA-----PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309 (325)
T ss_dssp CCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC-----CCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 2111 1234456888999999999999999999999986
No 64
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.8e-39 Score=361.84 Aligned_cols=253 Identities=19% Similarity=0.282 Sum_probs=210.4
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCch----hhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGET----THQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
.+.|++.+.||+|+||.||+|+.+ +|+.||+|++....... .....+.+|+.++++++||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 357999999999999999999765 68999999997543221 2357889999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC----ceEEeccCc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY----EAHVSDFGT 838 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~ 838 (964)
++||||++||+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||+
T Consensus 91 ~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 9999999999999999653 4589999999999999999999999 999999999999998877 799999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (964)
+....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.. ....+....+...
T Consensus 166 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~-----------~~~~~~~~~i~~~ 233 (361)
T 2yab_A 166 AHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG-----------DTKQETLANITAV 233 (361)
T ss_dssp CEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC-----------SSHHHHHHHHHTT
T ss_pred ceEcCCCC-ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC-----------CCHHHHHHHHHhc
Confidence 98765432 23456799999999999998999999999999999999999999852 2233445555444
Q ss_pred CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 919 RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 919 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+ ..........+.+++.+||.+||++|||+.|+++
T Consensus 234 ~~~~~--~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 234 SYDFD--EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCCCC--HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCC--chhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 43322 1112233456788899999999999999999875
No 65
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1e-39 Score=366.75 Aligned_cols=255 Identities=22% Similarity=0.322 Sum_probs=205.0
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 763 (964)
..++|+..+.||+|+||+||+|+.+ +++.||+|++++... .......+..|..+++++ +||||+++++++.+.+..|
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 3568999999999999999999765 578899999975422 222334677899998776 8999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+...
T Consensus 130 lV~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 9999999999999997653 489999999999999999999999 99999999999999999999999999998655
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||......... ...........+.......+
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~--~~~~~~~~~~~i~~~~~~~p 282 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP--DQNTEDYLFQVILEKQIRIP 282 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC--------CCHHHHHHHHHHCCCCCC
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccccccc--chhhHHHHHHHHhccccCCC
Confidence 4445556778999999999999999999999999999999999999999643321110 11112233344444443322
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNM 954 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~ 954 (964)
.....++.+++.+||+.||++||++
T Consensus 283 ------~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 283 ------RSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ------TTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ------CcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1233457788899999999999996
No 66
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.6e-40 Score=365.70 Aligned_cols=252 Identities=23% Similarity=0.352 Sum_probs=204.6
Q ss_pred HHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCcee
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 762 (964)
...++|+..+.||+|+||+||+|+.+ +++.||||+++... ........+.+|..+++.+ +||||+++++++.+.+..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 35678999999999999999999765 68999999987532 1233456788899999887 699999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
|+||||++||+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+..
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 99999999999999997653 489999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||.. ....+....+.......
T Consensus 175 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~-----------~~~~~~~~~i~~~~~~~ 243 (353)
T 3txo_A 175 ICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA-----------ENEDDLFEAILNDEVVY 243 (353)
T ss_dssp CC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCC
T ss_pred ccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCC-----------CCHHHHHHHHHcCCCCC
Confidence 5454455567899999999999998999999999999999999999999752 23345555555554433
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNM------QIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~------~evl~ 959 (964)
+. .....+.+++.+|+.+||++||++ +++++
T Consensus 244 p~------~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 244 PT------WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CT------TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CC------CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 21 123457788889999999999998 66653
No 67
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=8.5e-40 Score=376.48 Aligned_cols=369 Identities=19% Similarity=0.197 Sum_probs=221.5
Q ss_pred eccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCC
Q 037111 90 DLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDG 169 (964)
Q Consensus 90 ~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~ 169 (964)
........+..+..++++++|++|+|++|.+++ +| .++.+++|++|++++|++++. | ++.+++|++|+|++|++++
T Consensus 24 ~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~-~~~l~~L~~L~Ls~N~l~~ 99 (457)
T 3bz5_A 24 VAAAFEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D-LSQNTNLTYLACDSNKLTN 99 (457)
T ss_dssp HHHHTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C-CTTCTTCSEEECCSSCCSC
T ss_pred HHHhcCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c-cccCCCCCEEECcCCCCce
Confidence 333445555566678888888888888888885 45 577888888888888888775 3 7777888888888888776
Q ss_pred CCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhc
Q 037111 170 PIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGN 249 (964)
Q Consensus 170 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 249 (964)
. | ++++++|++|++++|++++ +| ++++++|++|++++|++++. .++.+++|++|++++|+..+.+ .++.
T Consensus 100 ~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~ 168 (457)
T 3bz5_A 100 L-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTP 168 (457)
T ss_dssp C-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTT
T ss_pred e-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--cccc
Confidence 4 3 7777778888888887775 33 67777777777777777763 2566667777777777544444 2556
Q ss_pred ccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEE
Q 037111 250 LKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFS 329 (964)
Q Consensus 250 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~ 329 (964)
+++|++|++++|++++ +| +..+++|+.|++++|++++. .++.+++|+.|++++|++++.
T Consensus 169 l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i--------------- 227 (457)
T 3bz5_A 169 QTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI--------------- 227 (457)
T ss_dssp CTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC---------------
T ss_pred CCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc---------------
Confidence 6666666666666664 33 55556666666666666542 244555555555555555431
Q ss_pred eecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCC
Q 037111 330 VHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITG 409 (964)
Q Consensus 330 l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~ 409 (964)
| +..+++|+.|++++|++++.+ +..+++|+.|++++|
T Consensus 228 ----------p--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n---------------------------- 264 (457)
T 3bz5_A 228 ----------D--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT---------------------------- 264 (457)
T ss_dssp ----------C--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC----------------------------
T ss_pred ----------C--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC----------------------------
Confidence 1 333444444444444444332 222333444443332
Q ss_pred CCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCccc
Q 037111 410 GIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGY 489 (964)
Q Consensus 410 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 489 (964)
+|+.|++++|.+.+.+| ++.+++|+.|+|++|...+.+|. ...+|+.|++++|
T Consensus 265 ----------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~------------ 317 (457)
T 3bz5_A 265 ----------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN------------ 317 (457)
T ss_dssp ----------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC------------
T ss_pred ----------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc------------
Confidence 23444555555444443 34455566666666655544442 2344455544444
Q ss_pred ccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEE
Q 037111 490 LLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSID 569 (964)
Q Consensus 490 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ 569 (964)
++|++|++++|+|++. + ++.+++|+.|++++|+|++ ++.|+.|++++|.++|. ..+..|..++
T Consensus 318 -~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~ 380 (457)
T 3bz5_A 318 -PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKET 380 (457)
T ss_dssp -TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBC
T ss_pred -ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccc
Confidence 4566666666666653 2 6666666666666666664 23455566666666654 2344556667
Q ss_pred ecCCcccccCCC
Q 037111 570 ISYNELDGPIPS 581 (964)
Q Consensus 570 ls~N~l~~~~~~ 581 (964)
+++|+++|.+|.
T Consensus 381 l~~N~l~g~ip~ 392 (457)
T 3bz5_A 381 LTNNSLTIAVSP 392 (457)
T ss_dssp CBTTBEEEECCT
T ss_pred cccCcEEEEcCh
Confidence 777777777664
No 68
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.1e-39 Score=363.63 Aligned_cols=254 Identities=18% Similarity=0.244 Sum_probs=209.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc---CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT---GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
+.|++.+.||+|+||+||+|..+ +++.||||++.... ......+.+.+|+.+++.++||||+++++++.+++..|+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 57999999999999999999764 78999999986421 122245778999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc---eEEeccCcc
Q 037111 765 VYEYLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE---AHVSDFGTA 839 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~a 839 (964)
||||+++|+|.+++... ....+++..+..++.||++||+|||++ +|+||||||+||+++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999999888653 334588999999999999999999999 9999999999999987654 999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
..............||+.|+|||++.+..++.++||||+||++|+|++|+.||... ..+....+....
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~------------~~~~~~~i~~~~ 248 (351)
T 3c0i_A 181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT------------KERLFEGIIKGK 248 (351)
T ss_dssp EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS------------HHHHHHHHHHTC
T ss_pred eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc------------HHHHHHHHHcCC
Confidence 88766544445668999999999999999999999999999999999999998531 123344444443
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+. .........+.+++.+||..||++|||+.++++
T Consensus 249 ~~~~~--~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 249 YKMNP--RQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CCCCH--HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCc--cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 33221 111233456888999999999999999999975
No 69
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.8e-39 Score=352.85 Aligned_cols=258 Identities=25% Similarity=0.340 Sum_probs=207.0
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 57999999999999999999754 78899999986432 33444578899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... ++++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 91 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp ECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 9999999999997654 489999999999999999999999 99999999999999999999999999998765443
Q ss_pred -CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 847 -SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 847 -~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.......||+.|+|||.+.+..++.++||||+|+++|||++|+.||.... .............+.. .
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-----------~~~~~~~~~~~~~~~~-~ 233 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET-----------AVSIAIKHIQDSVPNV-T 233 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC-----------HHHHHHHHHSSCCCCH-H
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-----------hHHHHHHHhhccCCCc-c
Confidence 22334578999999999999999999999999999999999999985322 2222223333322211 1
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhcC
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRP-NMQIVCKLLSG 963 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RP-s~~evl~~L~~ 963 (964)
.....+.+..+.+++.+|+++||++|| +++++.+.|+.
T Consensus 234 ~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~ 272 (294)
T 4eqm_A 234 TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSS 272 (294)
T ss_dssp HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred hhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence 122233456788999999999999999 89999888753
No 70
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1e-39 Score=350.39 Aligned_cols=251 Identities=23% Similarity=0.391 Sum_probs=208.8
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
++|+..+.||+|+||.||+|+..+++.||+|++..... ..+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc---CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 57999999999999999999988889999999975322 346789999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC-C
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS-S 847 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-~ 847 (964)
+++|+|.+++.... ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++....... .
T Consensus 87 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 162 (269)
T 4hcu_A 87 MEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 162 (269)
T ss_dssp CTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccc
Confidence 99999999996543 3589999999999999999999999 99999999999999999999999999998664332 1
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
......+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||.. ....+....+........
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~-----------~~~~~~~~~~~~~~~~~~--- 228 (269)
T 4hcu_A 163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN-----------RSNSEVVEDISTGFRLYK--- 228 (269)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT-----------CCHHHHHHHHHTTCCCCC---
T ss_pred cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCC-----------CCHHHHHHHHhcCccCCC---
Confidence 2233456788999999998999999999999999999999 8999753 222333444333222111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.......+.+++.+||+.||++||+++++++.|+
T Consensus 229 --~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~ 262 (269)
T 4hcu_A 229 --PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 262 (269)
T ss_dssp --CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 1122355788899999999999999999999885
No 71
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.2e-39 Score=362.30 Aligned_cols=254 Identities=20% Similarity=0.305 Sum_probs=211.1
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
..++|+..+.||+|+||.||+|..+ +|+.||+|++............+.+|+.++++++||||+++++++.+++..|+|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3568999999999999999999764 689999999976555555567899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC---ceEEeccCccccc
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY---EAHVSDFGTAKLL 842 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~a~~~ 842 (964)
|||+++|+|.+++... ..+++..+..++.||++||+|||++ +|+||||||+||+++.++ .+||+|||++...
T Consensus 107 ~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp ECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 9999999999999654 3489999999999999999999999 999999999999998654 5999999999876
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
.... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||... ...+....+.......
T Consensus 182 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~-----------~~~~~~~~i~~~~~~~ 249 (362)
T 2bdw_A 182 NDSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE-----------DQHRLYAQIKAGAYDY 249 (362)
T ss_dssp TTCC-SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----------SHHHHHHHHHHTCCCC
T ss_pred cCCc-ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCC-----------CHHHHHHHHHhCCCCC
Confidence 5432 234567999999999999989999999999999999999999997532 2234444444433322
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+. .........+.+++.+||..||++||++.++++
T Consensus 250 ~~--~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 250 PS--PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp CT--TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred Cc--ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11 112234456788999999999999999999875
No 72
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.1e-39 Score=353.81 Aligned_cols=255 Identities=24% Similarity=0.372 Sum_probs=201.0
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
++|+..+.||+|+||+||+|+..+++.||+|++............+.+|+.++++++||||+++++++.+++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57999999999999999999888899999999975443344446788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 848 (964)
+++ +|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 82 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 156 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156 (288)
T ss_dssp CSE-EHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccccc
Confidence 986 9999986543 4588999999999999999999999 9999999999999999999999999999876544444
Q ss_pred ccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc---c------
Q 037111 849 WSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD---A------ 918 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~------ 918 (964)
.....||+.|+|||.+.+. .++.++||||+||++|||++|+.||..... .+....+.. .
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----------~~~~~~~~~~~~~~~~~~~ 225 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE-----------ADQLMRIFRILGTPNSKNW 225 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----------HHHHHHHHHHHCCCCTTTS
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHHHHCCCChhhc
Confidence 4456789999999998764 589999999999999999999999864221 111111100 0
Q ss_pred -----------CCC---CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 919 -----------RLP---PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 919 -----------~~~---~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
... +.............+.+++.+||+.||++|||++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 226 PNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 00001111223456788999999999999999999975
No 73
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=5.2e-40 Score=370.17 Aligned_cols=253 Identities=24% Similarity=0.399 Sum_probs=207.2
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+++ +++.||||+++.. ........+.+|+.++++++||||+++++++.+++..++||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 357899999999999999999876 7899999998743 23344467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... ..+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 192 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp ECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred EcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 9999999999997543 3488999999999999999999999 99999999999999999999999999998654332
Q ss_pred CCc--cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhcc-CCCC
Q 037111 847 SNW--SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPP 922 (964)
Q Consensus 847 ~~~--~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 922 (964)
... ....+++.|+|||.+.+..++.++|||||||++|||++ |+.||... ...+....+... +.+.
T Consensus 268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~-----------~~~~~~~~~~~~~~~~~ 336 (377)
T 3cbl_A 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL-----------SNQQTREFVEKGGRLPC 336 (377)
T ss_dssp EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS-----------CHHHHHHHHHTTCCCCC
T ss_pred eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----------CHHHHHHHHHcCCCCCC
Confidence 111 12235678999999998899999999999999999998 99997532 222222222222 1221
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+ ..++..+.+++.+||+.||++|||++++++.|+
T Consensus 337 ~------~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 370 (377)
T 3cbl_A 337 P------ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370 (377)
T ss_dssp C------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 1 223456888999999999999999999999885
No 74
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.4e-39 Score=351.98 Aligned_cols=256 Identities=20% Similarity=0.318 Sum_probs=205.5
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||+|+||+||+|+.+ +++.||||++............+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57999999999999999999765 68899999997655555556788999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++ ++.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~-~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp CCSE-EHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS
T ss_pred cCCC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccc
Confidence 9986 6666665432 4589999999999999999999999 999999999999999999999999999987765555
Q ss_pred CccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc---CCCC-
Q 037111 848 NWSELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA---RLPP- 922 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~- 922 (964)
......||+.|+|||.+.+.. ++.++||||+||++|||++|+.||... ....+....+... ....
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~----------~~~~~~~~~i~~~~~~~~~~~ 226 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG----------NDVDDQLKRIFRLLGTPTEEQ 226 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCC----------SSHHHHHHHHHHHHCCCCTTT
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCC----------CCHHHHHHHHHHHhCCCChhh
Confidence 555668899999999998766 799999999999999999998886321 1122222222110 0000
Q ss_pred -------------------CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 -------------------PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 -------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.............+.+++.+|++.||++|||++|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 227 WPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000111223456778999999999999999999985
No 75
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.3e-39 Score=372.84 Aligned_cols=228 Identities=21% Similarity=0.214 Sum_probs=198.3
Q ss_pred CccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCC
Q 037111 78 FPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSL 157 (964)
Q Consensus 78 ~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L 157 (964)
.+++.+++|++|+|++|.+++. | .++.+++|++|+|++|.+++ +| ++.+++|++|++++|++++. + ++.+++|
T Consensus 36 ~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~-~~~l~~L 108 (457)
T 3bz5_A 36 ISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D-VTPLTKL 108 (457)
T ss_dssp EEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C-CTTCTTC
T ss_pred cChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e-cCCCCcC
Confidence 3567789999999999999974 5 79999999999999999996 45 89999999999999999986 3 8999999
Q ss_pred CEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeecccc
Q 037111 158 KNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNN 237 (964)
Q Consensus 158 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 237 (964)
++|++++|++++ +| ++.+++|++|++++|++++. + ++++++|++|++++|+..+.+ .++.+++|++|++++|
T Consensus 109 ~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n 180 (457)
T 3bz5_A 109 TYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFN 180 (457)
T ss_dssp CEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCC
Confidence 999999999997 44 89999999999999999974 3 889999999999999665555 5889999999999999
Q ss_pred ccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCc
Q 037111 238 QLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQ 317 (964)
Q Consensus 238 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 317 (964)
++++ +| ++.+++|+.|++++|++++. .+..+++|++|++++|++++ +| ++.+++|+.|++++|++++..+
T Consensus 181 ~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~- 250 (457)
T 3bz5_A 181 KITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV- 250 (457)
T ss_dssp CCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC-
T ss_pred ccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH-
Confidence 9997 45 88999999999999999964 38899999999999999997 56 8899999999999999997532
Q ss_pred ccccCCcceEEEeec
Q 037111 318 NICQSGSLQYFSVHD 332 (964)
Q Consensus 318 ~~~~~~~L~~L~l~~ 332 (964)
..+++|+.|++++
T Consensus 251 --~~l~~L~~L~l~~ 263 (457)
T 3bz5_A 251 --STLSKLTTLHCIQ 263 (457)
T ss_dssp --TTCTTCCEEECTT
T ss_pred --HHCCCCCEEeccC
Confidence 2344455554443
No 76
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.4e-39 Score=348.97 Aligned_cols=253 Identities=26% Similarity=0.416 Sum_probs=209.1
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||.||+|+.+++..||+|++.... ....++.+|+.++++++||||+++++++.++...++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS---MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT---BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC---CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 35799999999999999999999888899999987532 234678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+........
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 84 YISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp CCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred ccCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 999999999997643 3489999999999999999999999 999999999999999999999999999987654432
Q ss_pred C-ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 848 N-WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 848 ~-~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
. .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||+... ..+....+........
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~-- 226 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT-----------NSEVVLKVSQGHRLYR-- 226 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC-----------HHHHHHHHHTTCCCCC--
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC-----------hHHHHHHHHcCCCCCC--
Confidence 1 223456778999999998889999999999999999999 999975322 2233333322221111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....+..+.+++.+||+.||++|||++++++.|+.
T Consensus 227 ---~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 261 (268)
T 3sxs_A 227 ---PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEP 261 (268)
T ss_dssp ---CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGG
T ss_pred ---CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 01123457889999999999999999999999863
No 77
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3.1e-39 Score=358.28 Aligned_cols=254 Identities=22% Similarity=0.328 Sum_probs=206.1
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 764 (964)
.++|+..+.||+|+||.||+|+.+ +++.||+|++.... ........+.+|..+++++ +||||+++++++.+.+..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 467999999999999999999765 68899999997543 2334456788999999887 89999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 88 v~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp EECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 999999999999997653 489999999999999999999999 999999999999999999999999999986554
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||......... ...........+.......+
T Consensus 163 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~--~~~~~~~~~~~i~~~~~~~p- 239 (345)
T 3a8x_A 163 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP--DQNTEDYLFQVILEKQIRIP- 239 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC---------CHHHHHHHHHHCCCCCC-
T ss_pred CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccc--ccccHHHHHHHHHcCCCCCC-
Confidence 444455678999999999999999999999999999999999999999643221110 01112233333433333322
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNM 954 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~ 954 (964)
......+.+++.+||+.||++||++
T Consensus 240 -----~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 240 -----RSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -----TTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred -----CCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 1233457788899999999999996
No 78
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.1e-39 Score=366.22 Aligned_cols=252 Identities=27% Similarity=0.490 Sum_probs=196.8
Q ss_pred hcccccceeecCCceeEEEEEeC----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
++|++.+.||+|+||.||+|+.+ ++..||||+++... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 47999999999999999999764 57789999987532 34456789999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++|+|.+++.... ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 124 v~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp EEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 999999999999997543 4589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhcc-C
Q 037111 845 DSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-R 919 (964)
Q Consensus 845 ~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 919 (964)
.... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||.... ..+....+... +
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~-----------~~~~~~~i~~~~~ 268 (373)
T 2qol_A 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS-----------NQDVIKAVDEGYR 268 (373)
T ss_dssp --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC-----------HHHHHHHHHTTEE
T ss_pred CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC-----------HHHHHHHHHcCCC
Confidence 3221 112235678999999999999999999999999999998 999975321 22333332222 1
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+.+ ..++..+.+++.+||+.||++||++++|++.|+
T Consensus 269 ~~~~------~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~ 305 (373)
T 2qol_A 269 LPPP------MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305 (373)
T ss_dssp CCCC------TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC------ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHH
Confidence 1111 234456889999999999999999999999885
No 79
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-39 Score=356.32 Aligned_cols=251 Identities=21% Similarity=0.295 Sum_probs=210.4
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||.||+|..+ +++.||+|.+... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 80 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence 367999999999999999999765 6788999998642 334567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC--CCceEEeccCcccccCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF--EYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~--~~~~kl~Dfg~a~~~~~ 844 (964)
||+++|+|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++. ++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 81 EFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred EeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 9999999999996533 3589999999999999999999999 9999999999999987 78999999999987654
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.. ......||+.|+|||.+.+..++.++||||+||++|+|++|+.||.. ....+....+.......+
T Consensus 157 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~-----------~~~~~~~~~i~~~~~~~~- 223 (321)
T 1tki_A 157 GD-NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA-----------ETNQQIIENIMNAEYTFD- 223 (321)
T ss_dssp TC-EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC-----------SSHHHHHHHHHHTCCCCC-
T ss_pred CC-ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcC-----------CCHHHHHHHHHcCCCCCC-
Confidence 32 33456789999999999988899999999999999999999999853 223345555555444332
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+.++.+++.+||..||++|||+.|+++
T Consensus 224 -~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 224 -EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp -HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1112234566888999999999999999999986
No 80
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.1e-38 Score=349.64 Aligned_cols=272 Identities=33% Similarity=0.563 Sum_probs=221.2
Q ss_pred CcccHHHHHHHhhccccc------ceeecCCceeEEEEEeCCCCeEEEEEecccc--CchhhHHHHHHHHHHHhCCCCCc
Q 037111 677 GKLVYEEIIRSINNFDES------FCIGRGGYGSVYKAELPSGDTVAVKKLHSFT--GETTHQKEFLSEIKALTGVRHRN 748 (964)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~n 748 (964)
..+.+.++.++++.|... +.||+|+||.||+|.. +++.||||++.... ........+.+|+.++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 457788999999998887 8999999999999987 58899999986532 23344678999999999999999
Q ss_pred eeeEEeeeecCceeEEEEEeccCCCHHHHhhhc-CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC
Q 037111 749 IVKFYGFCSHARHSFLVYEYLERGSLARILSSE-TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF 827 (964)
Q Consensus 749 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~ 827 (964)
|+++++++.+.+..++||||+++|+|.+++... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 999999999999999999999999999999753 334689999999999999999999999 9999999999999999
Q ss_pred CCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCC
Q 037111 828 EYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPG 905 (964)
Q Consensus 828 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~ 905 (964)
++.+||+|||++......... .....|++.|+|||.+.+ .++.++||||||+++|+|++|+.||.........
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~---- 243 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL---- 243 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT----
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHH----
Confidence 999999999999866543222 234568999999998765 5899999999999999999999998754331110
Q ss_pred CChhHH-------HHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 906 ANMNEA-------IDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 906 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+. +....+...+ ......+..+.+++.+||+.||++|||+++|++.|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~ 302 (307)
T 2nru_A 244 LDIKEEIEDEEKTIEDYIDKKMN-----DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302 (307)
T ss_dssp THHHHHHHTTSCCHHHHSCSSCS-----CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred HHHHHHhhhhhhhhhhhcccccc-----ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 000010 1112222222 223567788999999999999999999999999886
No 81
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.6e-39 Score=347.57 Aligned_cols=251 Identities=21% Similarity=0.313 Sum_probs=209.0
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--ceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--RHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+.+ ++.||||++..........+.+.+|+.++++++||||+++++++.+. ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 467999999999999999999985 88999999986655566667899999999999999999999999887 788999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP--IVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
|||+++|+|.+++.......+++..+..++.|++.||+|||+. + ++||||||+||+++.++.++++|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 9999999999999876666799999999999999999999998 7 9999999999999999999999998876533
Q ss_pred CCCCCccccccccccccccccccCCCCc---chhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTE---KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
. ....||+.|+|||.+.+..++. ++||||||+++|||++|+.||... ...+..........
T Consensus 165 ~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~-----------~~~~~~~~~~~~~~ 228 (271)
T 3kmu_A 165 S-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL-----------SNMEIGMKVALEGL 228 (271)
T ss_dssp C-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS-----------CHHHHHHHHHHSCC
T ss_pred c-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc-----------ChHHHHHHHHhcCC
Confidence 2 2346899999999998765544 799999999999999999998532 22233333332222
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+.. ....+..+.+++.+||+.||++|||++++++.|+
T Consensus 229 ~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~ 266 (271)
T 3kmu_A 229 RPTI----PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILE 266 (271)
T ss_dssp CCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 2221 1223456888999999999999999999999886
No 82
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3e-40 Score=359.69 Aligned_cols=264 Identities=25% Similarity=0.389 Sum_probs=203.6
Q ss_pred hhcccccceeecCCceeEEEEEe-----CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--c
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-----PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--R 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~ 760 (964)
.++|++.+.||+|+||+||+|++ .+++.||||++... .....+.+.+|+.++++++||||+++++++... .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 35799999999999999999974 36889999998742 344557899999999999999999999998654 4
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred ceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 6899999999999999997653 3489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccc-----cCCCCCCCChhHHH
Q 037111 841 LLKPDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSL-----SDSSLPGANMNEAI 912 (964)
Q Consensus 841 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~-----~~~~~~~~~~~~~~ 912 (964)
........ .....+++.|+|||.+.+..++.++||||||+++|||+||..|+...... ..............
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHH
Confidence 76543321 22345677899999999999999999999999999999999997643221 00000000011112
Q ss_pred HhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 913 DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+......+. ...++..+.+++.+||+.||++|||++|+++.|+
T Consensus 243 ~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~ 287 (295)
T 3ugc_A 243 ELLKNNGRLPR-----PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 287 (295)
T ss_dssp HHHHTTCCCCC-----CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHhccCcCCC-----CcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 22211111111 1234566888999999999999999999999885
No 83
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.6e-39 Score=352.32 Aligned_cols=256 Identities=25% Similarity=0.380 Sum_probs=198.3
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHh--CCCCCceeeEEeeeec----Cce
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALT--GVRHRNIVKFYGFCSH----ARH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~--~l~h~niv~l~~~~~~----~~~ 761 (964)
.++|+..+.||+|+||+||+|+. +++.||||++... ....+..|.+++. .++||||+++++++.. ...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 35799999999999999999988 5899999998632 2244455555554 4899999999998654 356
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEeccCCCCCeEECCCCceEE
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMH--------HECRPPIVHRDVSSKNVLLDFEYEAHV 833 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~iiH~dlkp~Nill~~~~~~kl 833 (964)
.++||||+++|+|.++++. ..+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||
T Consensus 81 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl 154 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCI 154 (301)
T ss_dssp EEEEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEE
T ss_pred eEEehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEE
Confidence 8999999999999999954 34899999999999999999999 77 9999999999999999999999
Q ss_pred eccCcccccCCCCCC----ccccccccccccccccccC------CCCcchhHHHHHHHHHHHHhC----------CCCCC
Q 037111 834 SDFGTAKLLKPDSSN----WSELAGTYGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKG----------QHPKD 893 (964)
Q Consensus 834 ~Dfg~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~sDvwSlGvll~el~tg----------~~p~~ 893 (964)
+|||+++........ .....||+.|+|||.+.+. .++.++|||||||++|||+|| +.||.
T Consensus 155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~ 234 (301)
T 3q4u_A 155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234 (301)
T ss_dssp CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence 999999766544332 2234799999999999876 455799999999999999999 55553
Q ss_pred ccccccCCCCCCCChhHHHHhhh-cc-CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 894 LLSSLSDSSLPGANMNEAIDHMF-DA-RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.... ............ .. ..+...........+..+.+++.+||+.||++|||+++|++.|+
T Consensus 235 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 298 (301)
T 3q4u_A 235 DVVP-------NDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298 (301)
T ss_dssp TTSC-------SSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred ccCC-------CCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHh
Confidence 2211 111112222221 11 11111112233457788999999999999999999999999986
No 84
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=9.6e-40 Score=377.16 Aligned_cols=252 Identities=23% Similarity=0.445 Sum_probs=209.4
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||.||+|.++++..||||+++... ...+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 35788999999999999999999888899999997532 34578999999999999999999999987 567899999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~ 339 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339 (454)
T ss_dssp CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence 99999999999765444588999999999999999999999 999999999999999999999999999987653321
Q ss_pred -CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhcc-CCCCCc
Q 037111 848 -NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPW 924 (964)
Q Consensus 848 -~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 924 (964)
......+++.|+|||.+.+..++.++|||||||++|||+| |+.||.. ....+....+... +.+.+
T Consensus 340 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~-----------~~~~~~~~~i~~~~~~~~~- 407 (454)
T 1qcf_A 340 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG-----------MSNPEVIRALERGYRMPRP- 407 (454)
T ss_dssp HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT-----------CCHHHHHHHHHHTCCCCCC-
T ss_pred eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCC-----------CCHHHHHHHHHcCCCCCCC-
Confidence 1123346788999999998999999999999999999999 9999752 2223333333322 22211
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
..++..+.+++.+||+.||++|||+++|++.|+.
T Consensus 408 -----~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~ 441 (454)
T 1qcf_A 408 -----ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 441 (454)
T ss_dssp -----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -----CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence 2345668899999999999999999999999864
No 85
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.9e-39 Score=353.55 Aligned_cols=253 Identities=18% Similarity=0.285 Sum_probs=208.5
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCc----hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE----TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
.+.|+..+.||+|+||.||+|+.+ +|+.||+|++...... ......+.+|+.++++++||||+++++++.+....
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356999999999999999999765 6899999998754322 12357899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC----ceEEeccCc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY----EAHVSDFGT 838 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~ 838 (964)
++||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||+
T Consensus 90 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 9999999999999999653 4589999999999999999999999 999999999999999887 899999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (964)
++...... ......||+.|+|||.+.+..++.++||||+||++|+|++|+.||.. ....+....+...
T Consensus 165 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~-----------~~~~~~~~~~~~~ 232 (326)
T 2y0a_A 165 AHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG-----------DTKQETLANVSAV 232 (326)
T ss_dssp CEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC-----------SSHHHHHHHHHHT
T ss_pred CeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCC-----------CCHHHHHHHHHhc
Confidence 98765432 23456799999999999999999999999999999999999999752 1223333333333
Q ss_pred CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 919 RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 919 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+ ..........+.+++.+||..||++|||+.++++
T Consensus 233 ~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 233 NYEFE--DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCCCC--HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCcC--ccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22221 1111233456788999999999999999999986
No 86
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.3e-39 Score=360.64 Aligned_cols=252 Identities=24% Similarity=0.330 Sum_probs=206.9
Q ss_pred HHHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCce
Q 037111 685 IRSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARH 761 (964)
Q Consensus 685 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 761 (964)
....++|+..+.||+|+||.||+|+.+ +|+.||||+++.... .......+..|..+++.+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345678999999999999999999775 688999999875321 123345677898888876 89999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.|+||||++||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 999999999999999997643 488999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
............||+.|+|||++.+..++.++||||+||++|||++|+.||.. ....+....+......
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-----------~~~~~~~~~i~~~~~~ 236 (345)
T 1xjd_A 168 NMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG-----------QDEEELFHSIRMDNPF 236 (345)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCC
T ss_pred cccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC-----------CCHHHHHHHHHhCCCC
Confidence 55444445567899999999999999999999999999999999999999852 2223444444433322
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQ-IVC 958 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~-evl 958 (964)
.+ ......+.+++.+||..||++||++. +++
T Consensus 237 ~p------~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 237 YP------RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CC------TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CC------cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 11 11334577888999999999999987 553
No 87
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4e-39 Score=357.85 Aligned_cols=250 Identities=21% Similarity=0.323 Sum_probs=208.6
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 763 (964)
..++|+..+.||+|+||.||+|+.+ +++.||||++..... .......+..|..++..+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 4578999999999999999999776 478899999875321 223456788999999888 7999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||++||+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 98 lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 9999999999999997644 489999999999999999999999 99999999999999999999999999998655
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||.. ....+....+.......+
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~-----------~~~~~~~~~i~~~~~~~p 241 (353)
T 2i0e_A 173 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG-----------EDEDELFQSIMEHNVAYP 241 (353)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCCC
T ss_pred cCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC-----------CCHHHHHHHHHhCCCCCC
Confidence 444445567899999999999999999999999999999999999999752 223345555555443322
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCC-----HHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPN-----MQIVC 958 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs-----~~evl 958 (964)
.....++.+++.+||..||++||+ +++++
T Consensus 242 ------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~ 275 (353)
T 2i0e_A 242 ------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK 275 (353)
T ss_dssp ------TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHH
T ss_pred ------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence 123456788889999999999995 46665
No 88
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=350.84 Aligned_cols=261 Identities=21% Similarity=0.299 Sum_probs=209.6
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc--eeEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR--HSFLV 765 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv 765 (964)
++|++.+.||+|+||+||+|+.. +++.||||++..... ......+.+|+.++++++||||+++++++.... ..++|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 57999999999999999999765 589999999875332 233567889999999999999999999998755 78999
Q ss_pred EEeccCCCHHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE----CCCCceEEeccCccc
Q 037111 766 YEYLERGSLARILSSETA-TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL----DFEYEAHVSDFGTAK 840 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg~a~ 840 (964)
|||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 999999999999976432 3489999999999999999999999 99999999999999 788889999999998
Q ss_pred ccCCCCCCccccccccccccccccc--------cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHH
Q 037111 841 LLKPDSSNWSELAGTYGYVAPELAY--------TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912 (964)
Q Consensus 841 ~~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 912 (964)
....... .....||+.|+|||.+. +..++.++|||||||++|||++|+.||....... ...+.+
T Consensus 165 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-------~~~~~~ 236 (319)
T 4euu_A 165 ELEDDEQ-FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR-------RNKEVM 236 (319)
T ss_dssp ECCTTCC-BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG-------GCHHHH
T ss_pred ecCCCCc-eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc-------hhHHHH
Confidence 7654432 33457999999999986 5678999999999999999999999986432211 112333
Q ss_pred HhhhccCCCC-------------------CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 037111 913 DHMFDARLPP-------------------PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLL 961 (964)
Q Consensus 913 ~~~~~~~~~~-------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L 961 (964)
..+..+..+. +............+.+++.+||+.||++|||++|+++-.
T Consensus 237 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 237 YKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred HHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 3332221110 111123356777888999999999999999999999864
No 89
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=5.3e-39 Score=354.63 Aligned_cols=250 Identities=23% Similarity=0.338 Sum_probs=197.5
Q ss_pred hhcccccceeecCCceeEEEEEe----CCCCeEEEEEeccccC--chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL----PSGDTVAVKKLHSFTG--ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
.++|+..+.||+|+||.||+|+. .+++.||+|+++.... .......+.+|+.++++++||||+++++++.+++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999976 4789999999875421 22334567889999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 999999999999999997643 488899999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
............||+.|+|||.+.+..++.++||||||+++|||++|+.||.. ....+....+......
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~-----------~~~~~~~~~i~~~~~~ 239 (327)
T 3a62_A 171 SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG-----------ENRKKTIDKILKCKLN 239 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC-----------SSHHHHHHHHHHTCCC
T ss_pred cccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC-----------CCHHHHHHHHHhCCCC
Confidence 55444444556799999999999999999999999999999999999999853 2233444555444333
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
.+ ......+.+++.+||..||++|| ++.++++
T Consensus 240 ~p------~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 240 LP------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp CC------TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CC------CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 22 12335578888999999999999 6777764
No 90
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=8.8e-39 Score=350.39 Aligned_cols=247 Identities=25% Similarity=0.349 Sum_probs=207.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+.+ +|+.||+|++..... .......+.+|+.+++.++||||+++++++.+....|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 468999999999999999999765 789999999864321 223356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||++||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~ 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 159 (318)
T ss_dssp ECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred EeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc
Confidence 99999999999997643 488999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.....||+.|+|||.+.+..++.++||||+||++|||++|+.||.. ....+....+.......+
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~-----------~~~~~~~~~i~~~~~~~p-- 223 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD-----------SNTMKTYEKILNAELRFP-- 223 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC-----------SSHHHHHHHHHHCCCCCC--
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCC-----------CCHHHHHHHHHhCCCCCC--
Confidence 2345799999999999999999999999999999999999999853 223344455544443322
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
.....++.+++.+|+..||++|| +++++++
T Consensus 224 ----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 224 ----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ----CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 12234577888899999999999 8888864
No 91
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-39 Score=360.16 Aligned_cols=256 Identities=24% Similarity=0.409 Sum_probs=210.8
Q ss_pred HhhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR 760 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (964)
..++|+..+.||+|+||.||+|+.. +++.||||+++... .......+.+|+.++++++||||+++++++.+++
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 3568999999999999999999764 34789999987532 3444578999999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccC
Q 037111 761 HSFLVYEYLERGSLARILSSET----------------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDV 818 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dl 818 (964)
..++||||+++|+|.+++.... ...+++..++.++.||++||+|||++ +|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 9999999999999999997642 15689999999999999999999999 9999999
Q ss_pred CCCCeEECCCCceEEeccCcccccCCCC--CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcc
Q 037111 819 SSKNVLLDFEYEAHVSDFGTAKLLKPDS--SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLL 895 (964)
Q Consensus 819 kp~Nill~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~ 895 (964)
||+||+++.++.+||+|||+++...... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~- 279 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG- 279 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT-
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC-
Confidence 9999999999999999999997654332 12234567889999999999899999999999999999999 9999752
Q ss_pred ccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 896 SSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+....+.....+.. ...++..+.+++.+||+.||++||++.+|++.|+
T Consensus 280 ----------~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~ 331 (343)
T 1luf_A 280 ----------MAHEEVIYYVRDGNILAC-----PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 331 (343)
T ss_dssp ----------SCHHHHHHHHHTTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----------CChHHHHHHHhCCCcCCC-----CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHH
Confidence 223344444444333221 1233456888999999999999999999999886
No 92
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.8e-39 Score=370.64 Aligned_cols=247 Identities=26% Similarity=0.436 Sum_probs=205.2
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc-eeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR-HSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|.+. ++.||||+++... ..+.|.+|+.++++++||||+++++++.... ..++||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 467899999999999999999886 7899999987432 3467999999999999999999999987665 799999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.......+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 342 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST- 342 (450)
T ss_dssp ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-
Confidence 999999999999877666689999999999999999999999 9999999999999999999999999999854322
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhcc-CCCCCc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPW 924 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 924 (964)
.....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .+....+..+ +.+.+
T Consensus 343 --~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-----------~~~~~~i~~~~~~~~p- 408 (450)
T 1k9a_A 343 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----------KDVVPRVEKGYKMDAP- 408 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT-----------TTHHHHHHTTCCCCCC-
T ss_pred --ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----------HHHHHHHHcCCCCCCC-
Confidence 123357889999999999999999999999999999998 9999853221 1222222222 12111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..++..+.+++.+||+.||++|||+.++++.|+
T Consensus 409 -----~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~ 441 (450)
T 1k9a_A 409 -----DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441 (450)
T ss_dssp -----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 234567889999999999999999999999885
No 93
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.5e-39 Score=355.29 Aligned_cols=252 Identities=25% Similarity=0.351 Sum_probs=201.7
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||+||+|+.. +++.||||++..... ....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 468999999999999999999765 789999999864322 223356889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 85 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 159 (323)
T 3tki_A 85 EYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (323)
T ss_dssp ECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence 999999999999644 3489999999999999999999999 99999999999999999999999999998654322
Q ss_pred --CCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 847 --SNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 847 --~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... . .............+
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---------~-~~~~~~~~~~~~~~ 229 (323)
T 3tki_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS---------C-QEYSDWKEKKTYLN 229 (323)
T ss_dssp EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT---------S-HHHHHHHTTCTTST
T ss_pred cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH---------H-HHHHHHhcccccCC
Confidence 22345679999999999988775 77899999999999999999998632221 0 11111111111111
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. .......+.+++.+||..||++|||++|+++
T Consensus 230 ~----~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 230 P----WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp T----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred c----cccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 1 1233455778899999999999999999875
No 94
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.6e-39 Score=362.60 Aligned_cols=255 Identities=23% Similarity=0.381 Sum_probs=210.1
Q ss_pred hhcccccceeecCCceeEEEEEeC--------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeec
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP--------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSH 758 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 758 (964)
.++|++.+.||+|+||.||+|+.. .+..||||+++.. ........+.+|+++++++ +||||+++++++..
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 357999999999999999999752 2357999998753 3344557889999999999 89999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeE
Q 037111 759 ARHSFLVYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVL 824 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nil 824 (964)
++..++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+. +|+||||||+||+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 999999999999999999997644 23589999999999999999999999 9999999999999
Q ss_pred ECCCCceEEeccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCC
Q 037111 825 LDFEYEAHVSDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDS 901 (964)
Q Consensus 825 l~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~ 901 (964)
++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~------- 296 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG------- 296 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTT-------
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-------
Confidence 99999999999999987654432 2234467889999999999999999999999999999999 9999752
Q ss_pred CCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 902 SLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+....+........ ...+..++.+++.+||+.||++|||+++|++.|+
T Consensus 297 ----~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 348 (382)
T 3tt0_A 297 ----VPVEELFKLLKEGHRMDK-----PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348 (382)
T ss_dssp ----CCHHHHHHHHHTTCCCCC-----CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----CCHHHHHHHHHcCCCCCC-----CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 223333333333222211 1123456888999999999999999999999885
No 95
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=350.63 Aligned_cols=251 Identities=22% Similarity=0.305 Sum_probs=199.7
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCc------------------------hhhHHHHHHHHHHHh
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE------------------------TTHQKEFLSEIKALT 742 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------------------------~~~~~~~~~E~~~l~ 742 (964)
.++|+..+.||+|+||.||+|+.. +++.||||++...... ....+.+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 468999999999999999999754 6889999998643211 112356889999999
Q ss_pred CCCCCceeeEEeeeec--CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCC
Q 037111 743 GVRHRNIVKFYGFCSH--ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSS 820 (964)
Q Consensus 743 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp 820 (964)
+++||||+++++++.+ .+..++||||+++|+|.+++. ...+++..+..++.|+++||+|||++ +|+||||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 165 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKP 165 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCH
Confidence 9999999999999987 568999999999999988763 23589999999999999999999999 999999999
Q ss_pred CCeEECCCCceEEeccCcccccCCCCCCccccccccccccccccccCC---CCcchhHHHHHHHHHHHHhCCCCCCcccc
Q 037111 821 KNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGQHPKDLLSS 897 (964)
Q Consensus 821 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~sDvwSlGvll~el~tg~~p~~~~~~ 897 (964)
+||+++.++.+||+|||+++.............||+.|+|||.+.+.. ++.++|||||||++|||++|+.||...
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~-- 243 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE-- 243 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS--
T ss_pred HHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc--
Confidence 999999999999999999987765544445668999999999998765 377899999999999999999998532
Q ss_pred ccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 898 LSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+.......+. .......+.+++.+||+.||++||+++|+++
T Consensus 244 ---------~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 244 ---------RIMCLHSKIKSQALEFPD----QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp ---------SHHHHHHHHHHCCCCCCS----SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---------cHHHHHHHHhcccCCCCC----ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 122233333332222211 1123355788899999999999999999874
No 96
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=4.1e-39 Score=348.43 Aligned_cols=252 Identities=23% Similarity=0.410 Sum_probs=205.6
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||.||+|+..++..||||++..... ..+++.+|+.++++++||||+++++++.+.+..++|||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC---CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 457999999999999999999998888999999975322 24678999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC-
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS- 846 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~- 846 (964)
|+++|+|.+++.... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.++......
T Consensus 100 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 175 (283)
T 3gen_A 100 YMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175 (283)
T ss_dssp CCTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred ccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence 999999999997533 3489999999999999999999999 99999999999999999999999999998664332
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.......+++.|+|||.+.+..++.++||||+|+++|||+| |+.||.... ..+....+........
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~-----------~~~~~~~~~~~~~~~~-- 242 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT-----------NSETAEHIAQGLRLYR-- 242 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC-----------HHHHHHHHHTTCCCCC--
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC-----------hhHHHHHHhcccCCCC--
Confidence 11223456788999999998899999999999999999998 999975322 2233333333221111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.......+.+++.+||+.||++|||++++++.|+
T Consensus 243 ---~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 276 (283)
T 3gen_A 243 ---PHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 276 (283)
T ss_dssp ---CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred ---CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 0112345788999999999999999999999885
No 97
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.4e-38 Score=367.52 Aligned_cols=347 Identities=27% Similarity=0.362 Sum_probs=193.1
Q ss_pred CcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEE
Q 037111 81 SLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNL 160 (964)
Q Consensus 81 ~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L 160 (964)
..+++++.|+++++.++. +| .+..+++|++|+|++|.+++. |. ++.+++|++|++++|.+++..+ ++.+++|++|
T Consensus 43 ~~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L 117 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP-LANLTNLTGL 117 (466)
T ss_dssp HHHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG-GTTCTTCCEE
T ss_pred hHhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh-hcCCCCCCEE
Confidence 345677777777777764 44 366777777777777777743 33 6777777777777777776655 6677777777
Q ss_pred EcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccC
Q 037111 161 ALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240 (964)
Q Consensus 161 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 240 (964)
+|++|++++..+ ++++++|++|++++|.+++ +| .++++++|++|+++ |.+.+..+ +..+++|++|++++|.++
T Consensus 118 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 118 TLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVS 190 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCC
Confidence 777777765432 6677777777777777664 23 36666667766664 44443322 666666666666666666
Q ss_pred CCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccc
Q 037111 241 GSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNIC 320 (964)
Q Consensus 241 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 320 (964)
+. ..+..+++|++|++++|.+++..| +..+++|++|++++|++++. ..+..+++|+.|++++|.+++..+
T Consensus 191 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~---- 260 (466)
T 1o6v_A 191 DI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP---- 260 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG----
T ss_pred CC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh----
Confidence 43 235666666666666666664433 45556666666666666532 245555555555555555554322
Q ss_pred cCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceE
Q 037111 321 QSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGIL 400 (964)
Q Consensus 321 ~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L 400 (964)
+..+++|+.|++++|.+++..+ +..+++|+.|++++|++.+..+ +..+++|+.|
T Consensus 261 ----------------------~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 314 (466)
T 1o6v_A 261 ----------------------LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYL 314 (466)
T ss_dssp ----------------------GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEE
T ss_pred ----------------------hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEE
Confidence 3444445555555555444332 4444555555555555443322 3334444444
Q ss_pred eecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccc
Q 037111 401 KIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFS 480 (964)
Q Consensus 401 ~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 480 (964)
++++|.+++..| +..+++|++|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|+++
T Consensus 315 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 315 TLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp ECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEE
T ss_pred ECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCccc
Confidence 444444443322 34444555555555554432 234444555555555555544433 444445555555555444
Q ss_pred c
Q 037111 481 K 481 (964)
Q Consensus 481 ~ 481 (964)
+
T Consensus 389 ~ 389 (466)
T 1o6v_A 389 N 389 (466)
T ss_dssp C
T ss_pred C
Confidence 3
No 98
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=8.9e-39 Score=355.11 Aligned_cols=247 Identities=21% Similarity=0.287 Sum_probs=208.7
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+.+ +|+.||+|++.... ........+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 468999999999999999999765 68999999986432 1223456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC
Confidence 99999999999997653 489999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.. ....+....+.......+
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-----------~~~~~~~~~i~~~~~~~p-- 258 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA-----------DQPIQIYEKIVSGKVRFP-- 258 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCCC--
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCC-----------CCHHHHHHHHHcCCCCCC--
Confidence 2345799999999999999999999999999999999999999852 223345555555444322
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPN-----MQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs-----~~evl~ 959 (964)
......+.+++.+||+.||++||+ +++|++
T Consensus 259 ----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 259 ----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp ----TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred ----CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 123455788899999999999998 788764
No 99
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=363.06 Aligned_cols=255 Identities=24% Similarity=0.393 Sum_probs=207.7
Q ss_pred hhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
.++|+..+.||+|+||+||+|++. +++.||||+++.. ........+.+|+.++++++||||+++++++.+...
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc-cChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 357999999999999999999743 4668999998643 234445678899999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC---ceEE
Q 037111 762 SFLVYEYLERGSLARILSSETA-----TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY---EAHV 833 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~---~~kl 833 (964)
.++||||+++|+|.+++..... ..+++..++.++.||++||+|||++ +|+||||||+||+++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEE
Confidence 9999999999999999976432 3588999999999999999999999 999999999999999555 5999
Q ss_pred eccCcccccCCCC--CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhH
Q 037111 834 SDFGTAKLLKPDS--SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNE 910 (964)
Q Consensus 834 ~Dfg~a~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 910 (964)
+|||+++...... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.. ....+
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~-----------~~~~~ 294 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS-----------KSNQE 294 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT-----------CCHHH
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-----------CCHHH
Confidence 9999997543221 22234567899999999999999999999999999999998 9999753 22334
Q ss_pred HHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 911 AIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+........ ...++..+.+++.+||+.||++||++++|++.|+
T Consensus 295 ~~~~i~~~~~~~~-----~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~ 341 (367)
T 3l9p_A 295 VLEFVTSGGRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341 (367)
T ss_dssp HHHHHHTTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHcCCCCCC-----CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 4444433322211 1223456888999999999999999999999874
No 100
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=8.8e-39 Score=358.05 Aligned_cols=252 Identities=23% Similarity=0.397 Sum_probs=206.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|++.+.||+|+||.||+|+.+ +++.||+|++.... ........+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 468999999999999999999765 68899999986432 2233456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+.||+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 94 ~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp ECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 9999999999999653 4589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCcccccccccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 846 SSNWSELAGTYGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ....+....+.......
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~--------~~~~~~~~~~~~~~~~~ 239 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS--------TSSKEIVHTFETTVVTY 239 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT--------SCHHHHHHHHHHCCCCC
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC--------ccHHHHHHHHhhcccCC
Confidence 33456689999999999874 4589999999999999999999999863221 12223333333332222
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs-~~evl~ 959 (964)
+ ......+.+++.+||+.||++||+ ++++.+
T Consensus 240 p------~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 240 P------SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp C------TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred C------CcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 1 123356788899999999999998 677653
No 101
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.1e-38 Score=353.76 Aligned_cols=251 Identities=19% Similarity=0.387 Sum_probs=202.2
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc-----
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR----- 760 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 760 (964)
..++|+..+.||+|+||.||+|+.+ +|+.||||++.... .....+.+.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 4568999999999999999999876 79999999987533 3445578999999999999999999999986543
Q ss_pred ----------------------------------------------------eeEEEEEeccCCCHHHHhhhcCC-CCCC
Q 037111 761 ----------------------------------------------------HSFLVYEYLERGSLARILSSETA-TEMD 787 (964)
Q Consensus 761 ----------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~-~~l~ 787 (964)
..++||||+++|+|.+++..... ...+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 37999999999999999976432 2356
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC------------Cccccccc
Q 037111 788 WSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS------------NWSELAGT 855 (964)
Q Consensus 788 ~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~g~ 855 (964)
+..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....... ......||
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 667899999999999999999 999999999999999999999999999987765421 22345699
Q ss_pred cccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHH
Q 037111 856 YGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKS 935 (964)
Q Consensus 856 ~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (964)
+.|+|||.+.+..++.++||||+|+++|||++|..|+.. .............+. ........
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-------------~~~~~~~~~~~~~~~-----~~~~~~~~ 301 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-------------RVRIITDVRNLKFPL-----LFTQKYPQ 301 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-------------HHHHHHHHHTTCCCH-----HHHHHCHH
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-------------HHHHHHHhhccCCCc-----ccccCChh
Confidence 999999999999999999999999999999998776421 112222222332221 22344566
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHH
Q 037111 936 IIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 936 l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+.+++.+||+.||++|||++|+++
T Consensus 302 ~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 302 EHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHccCCCCcCCCHHHHhh
Confidence 788999999999999999999986
No 102
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=5.8e-39 Score=348.27 Aligned_cols=257 Identities=26% Similarity=0.442 Sum_probs=198.7
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||+||+|+.. ..||||+++.........+.+.+|+.++++++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 457999999999999999999864 4699999976655666677899999999999999999999965 4566899999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC--
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD-- 845 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 845 (964)
|+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 100 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 100 WCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp CCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred ecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccc
Confidence 999999999996543 4589999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCCccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 846 SSNWSELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
........|++.|+|||.+. +..++.++||||+|+++|||++|+.||..... .......+......+
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----------~~~~~~~~~~~~~~~ 245 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN----------RDQIIEMVGRGSLSP 245 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC----------HHHHHHHHHHTSCCC
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch----------HHHHHHHhcccccCc
Confidence 22234457899999999986 66788999999999999999999999853221 122222222222222
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
. .......++..+.+++.+||+.||++|||++++++.|+
T Consensus 246 ~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 284 (289)
T 3og7_A 246 D-LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284 (289)
T ss_dssp C-TTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred c-hhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 2 11222345567889999999999999999999999886
No 103
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.3e-39 Score=359.36 Aligned_cols=247 Identities=25% Similarity=0.297 Sum_probs=198.0
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHH-HhCCCCCceeeEEeeeecCceeEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKA-LTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
.++|+..+.||+|+||.||+|+.+ +++.||||++..... .......+..|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 468999999999999999999765 588899999975432 22334556677776 577899999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||++||+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 117 v~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 999999999999997643 488899999999999999999999 999999999999999999999999999987554
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||.. ....+....+.......+
T Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~-----------~~~~~~~~~i~~~~~~~~- 259 (373)
T 2r5t_A 192 HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS-----------RNTAEMYDNILNKPLQLK- 259 (373)
T ss_dssp CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC-----------SBHHHHHHHHHHSCCCCC-
T ss_pred CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC-----------CCHHHHHHHHHhcccCCC-
Confidence 44455567899999999999999999999999999999999999999852 223345555554433321
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQI 956 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~e 956 (964)
......+.+++.+||+.||++||++.+
T Consensus 260 -----~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 260 -----PNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp -----SSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred -----CCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 122345778888999999999999853
No 104
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1e-38 Score=361.85 Aligned_cols=204 Identities=20% Similarity=0.291 Sum_probs=180.8
Q ss_pred hhcccccceeecC--CceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 688 INNFDESFCIGRG--GYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 688 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
.++|++.+.||+| +||.||+|+.+ +++.||||++............+.+|+.+++.++||||+++++++.+++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4679999999999 99999999765 79999999997655555566788899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999877666799999999999999999999999 999999999999999999999999998865432
Q ss_pred CC-------CCcccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 845 DS-------SNWSELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 845 ~~-------~~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
.. .......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||..
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 239 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 239 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 21 11223468899999999987 6799999999999999999999999864
No 105
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.7e-39 Score=376.83 Aligned_cols=254 Identities=24% Similarity=0.401 Sum_probs=210.4
Q ss_pred hhcccccceeecCCceeEEEEEeCC-CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPS-GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
..+|+..+.||+|+||.||+|.++. +..||||+++... ...++|.+|+.++++++||||++++++|.+....++||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 3568899999999999999998764 7899999987432 23578999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 296 E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 372 (495)
T 1opk_A 296 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372 (495)
T ss_dssp ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred EccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence 999999999999876666799999999999999999999999 99999999999999999999999999998765432
Q ss_pred C-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 847 S-NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 847 ~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
. ......+++.|+|||.+.+..++.++|||||||++|||+| |+.||.... ..+....+... ...+
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~-----------~~~~~~~~~~~-~~~~- 439 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----------LSQVYELLEKD-YRME- 439 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-----------GGGHHHHHHTT-CCCC-
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC-----------HHHHHHHHHcC-CCCC-
Confidence 2 1223346788999999999999999999999999999999 889975322 12222222211 1111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
....++..+.+++.+||+.||++|||+++|++.|+.
T Consensus 440 ---~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~ 475 (495)
T 1opk_A 440 ---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 475 (495)
T ss_dssp ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ---CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 112344668889999999999999999999999864
No 106
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=9.5e-39 Score=351.24 Aligned_cols=256 Identities=21% Similarity=0.345 Sum_probs=190.2
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|..+ +|+.||+|++.... .......+.+|+.++++++||||+++++++.+++..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS-TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc-ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 467999999999999999999765 68999999987533 2233467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 767 EYLERGSLARILSSET----ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
||++ |+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9998 59999987532 23588999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc----
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD---- 917 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---- 917 (964)
...........||+.|+|||.+.+ ..++.++||||+||++|||++|+.||..... .+....+..
T Consensus 159 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----------~~~~~~i~~~~~~ 227 (317)
T 2pmi_A 159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND-----------EEQLKLIFDIMGT 227 (317)
T ss_dssp TSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----------HHHHHHHHHHHCS
T ss_pred CCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----------HHHHHHHHHHhCC
Confidence 655444455678999999999876 4689999999999999999999999853321 111111110
Q ss_pred ----------------cCCCC----Cc----cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ----------------ARLPP----PW----LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ----------------~~~~~----~~----~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+.. .. ..........++.+++.+||..||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 228 PNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00000 00 00000122346888999999999999999999875
No 107
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=8.4e-39 Score=351.68 Aligned_cols=255 Identities=25% Similarity=0.407 Sum_probs=209.0
Q ss_pred hhcccccceeecCCceeEEEEEe------CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
.++|++.+.||+|+||.||+|.. .+++.||||++... ......+.+.+|+.++++++||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN-ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC-CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 45799999999999999999965 24578999998743 334455788999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCC----------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCC
Q 037111 762 SFLVYEYLERGSLARILSSETA----------------------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVS 819 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlk 819 (964)
.++||||+++|+|.+++..... ..+++..+..++.||++||+|||++ +|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccc
Confidence 9999999999999999976432 3478999999999999999999999 99999999
Q ss_pred CCCeEECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccc
Q 037111 820 SKNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLS 896 (964)
Q Consensus 820 p~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~ 896 (964)
|+||+++.++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999876544322 223456789999999999889999999999999999999 999975322
Q ss_pred cccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 897 SLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+....+.....+.. ....+..+.+++.+||+.||++||+++++++.|+
T Consensus 258 -----------~~~~~~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~ 307 (314)
T 2ivs_A 258 -----------PERLFNLLKTGHRMER-----PDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307 (314)
T ss_dssp -----------GGGHHHHHHTTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----------HHHHHHHhhcCCcCCC-----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1222222222221111 1233456888999999999999999999999885
No 108
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.3e-39 Score=372.24 Aligned_cols=252 Identities=27% Similarity=0.453 Sum_probs=204.3
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||.||+|.++.+..||||+++... ...+.|.+|+.++++++||||+++++++.+ +..++|||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 35788999999999999999999877889999987532 234679999999999999999999999976 67899999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 335 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 335 (452)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence 99999999999765445689999999999999999999999 999999999999999999999999999987654322
Q ss_pred -CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC-CCCCc
Q 037111 848 -NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR-LPPPW 924 (964)
Q Consensus 848 -~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 924 (964)
......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.. ....+....+.... .+.+
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~-----------~~~~~~~~~i~~~~~~~~~- 403 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVNREVLDQVERGYRMPCP- 403 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT-----------CCHHHHHHHHHTTCCCCCC-
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCC-----------CCHHHHHHHHHcCCCCCCC-
Confidence 2223456789999999999999999999999999999999 8999742 22233343333221 2211
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
..++..+.+++.+||+.||++|||++++++.|+.
T Consensus 404 -----~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~ 437 (452)
T 1fmk_A 404 -----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437 (452)
T ss_dssp -----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 2345668889999999999999999999998863
No 109
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=349.71 Aligned_cols=246 Identities=22% Similarity=0.262 Sum_probs=197.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|+..+.||+|+||+||+|+.+ +++.||||++............+..|+..+.++ +||||++++++|.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57999999999999999999776 799999999875544444455566666665554 8999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+ +|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 137 e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp ECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred ecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 999 669999987654 4599999999999999999999999 99999999999999999999999999997765432
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
......||+.|+|||++.+ .++.++|||||||++|||++|..|+... .....+.....++.
T Consensus 212 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~--------------~~~~~~~~~~~~~~--- 272 (311)
T 3p1a_A 212 -AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG--------------EGWQQLRQGYLPPE--- 272 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH--------------HHHHHHTTTCCCHH---
T ss_pred -CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc--------------cHHHHHhccCCCcc---
Confidence 2334568999999998876 7999999999999999999997664321 12222222222211
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+.+++.+||++||++|||++|+++
T Consensus 273 -~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 273 -FTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp -HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -cccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11223456888999999999999999999986
No 110
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=7e-39 Score=353.18 Aligned_cols=250 Identities=25% Similarity=0.346 Sum_probs=185.5
Q ss_pred cceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEEEEEeccC
Q 037111 694 SFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
.+.||+|+||.||+|..+ +++.||||++... ....+.+|+.+++.+. ||||+++++++.++...|+||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 378999999999999765 6899999998632 3456778999999997 99999999999999999999999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC---ceEEeccCcccccCCCCCC
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY---EAHVSDFGTAKLLKPDSSN 848 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~---~~kl~Dfg~a~~~~~~~~~ 848 (964)
|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++........
T Consensus 91 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~ 165 (325)
T 3kn6_A 91 GELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP 165 (325)
T ss_dssp CBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc
Confidence 9999999764 3589999999999999999999999 999999999999998766 8999999999877655555
Q ss_pred ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccc
Q 037111 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVG 928 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (964)
.....||+.|+|||.+.+..++.++||||+||++|||++|+.||...... .......+....+.....+.+ ...
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~~~~~~~~i~~~~~~~~--~~~ 239 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRS----LTCTSAVEIMKKIKKGDFSFE--GEA 239 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-----------CCCHHHHHHHHTTTCCCCC--SHH
T ss_pred ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccc----cccccHHHHHHHHHcCCCCCC--ccc
Confidence 55667899999999999999999999999999999999999998643321 112223345555555444322 112
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 929 VEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 929 ~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......++.+++.+||+.||++|||++++++
T Consensus 240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred ccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 2334567888999999999999999998863
No 111
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=6.3e-38 Score=364.07 Aligned_cols=344 Identities=27% Similarity=0.408 Sum_probs=267.8
Q ss_pred CCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEE
Q 037111 59 GRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLH 138 (964)
Q Consensus 59 ~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 138 (964)
.+++.+++.++++.. ++. +..+++|++|||++|.+++..| ++++++|++|+|++|.+++..| ++.+++|++|+
T Consensus 46 ~~l~~L~l~~~~i~~-l~~--~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-IDG--VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HTCCEEECCSSCCCC-CTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred ccccEEecCCCCCcc-Ccc--hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 468889999887764 332 5678999999999999997544 9999999999999999996544 99999999999
Q ss_pred ccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCC
Q 037111 139 MFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGP 218 (964)
Q Consensus 139 l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 218 (964)
+++|.+++..+ +..+++|++|++++|.+++. | .++.+++|++|+++ |.+.+.. .++++++|++|++++|.+++.
T Consensus 119 L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~ 192 (466)
T 1o6v_A 119 LFNNQITDIDP-LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI 192 (466)
T ss_dssp CCSSCCCCCGG-GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCCCChH-HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC
Confidence 99999998765 99999999999999999963 3 58999999999997 5565443 399999999999999999865
Q ss_pred ccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccC
Q 037111 219 IPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNF 298 (964)
Q Consensus 219 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 298 (964)
..+..+++|++|++++|.+++..| ++.+++|++|++++|++++ + ..+..+++|+.|++++|++++..+ +..+
T Consensus 193 --~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l 264 (466)
T 1o6v_A 193 --SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGL 264 (466)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred --hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchh--hhcC
Confidence 358899999999999999997765 8889999999999999985 3 468899999999999999996554 8899
Q ss_pred ccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEc
Q 037111 299 MNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDL 378 (964)
Q Consensus 299 ~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 378 (964)
++|+.|++++|++++..+ +..+++|+.|++++|.+.+..+ +..+ ++|+.|++
T Consensus 265 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l------------------------~~L~~L~L 316 (466)
T 1o6v_A 265 TKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNL------------------------KNLTYLTL 316 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGC------------------------TTCSEEEC
T ss_pred CCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCC------------------------CCCCEEEC
Confidence 999999999999987543 5555555555555555544332 4444 44555555
Q ss_pred cCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccC
Q 037111 379 SYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSG 457 (964)
Q Consensus 379 s~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 457 (964)
++|++++..+ +..+++|+.|++++|.+++. ..+.++++|++|++++|++++..| +..+++|+.|++++|.+++
T Consensus 317 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred cCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 5555444333 34455555555555555543 356667777777777777776655 6677777777777777774
No 112
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=6.8e-39 Score=344.34 Aligned_cols=255 Identities=27% Similarity=0.434 Sum_probs=196.2
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCc--hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGE--TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|... ++.||||++...... ....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 457999999999999999999875 889999998653222 23346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC--------CCceEEeccC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF--------EYEAHVSDFG 837 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~--------~~~~kl~Dfg 837 (964)
|||+++|+|.+++.. ..+++..+..++.|+++|++|||++...+|+||||||+||+++. ++.+||+|||
T Consensus 85 ~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 999999999999853 35899999999999999999999991112999999999999986 6789999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
.+........ ....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||.... ..........
T Consensus 162 ~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----------~~~~~~~~~~ 228 (271)
T 3dtc_A 162 LAREWHRTTK--MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID-----------GLAVAYGVAM 228 (271)
T ss_dssp C---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC-----------HHHHHHHHHT
T ss_pred cccccccccc--cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHhhhc
Confidence 9986554322 24578999999999999999999999999999999999999985322 2222233322
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.....+. ....+..+.+++.+||+.||++|||++|+++.|+.
T Consensus 229 ~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 229 NKLALPI----PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp SCCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred CCCCCCC----CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 2222211 12334568889999999999999999999999874
No 113
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.2e-39 Score=356.07 Aligned_cols=248 Identities=22% Similarity=0.314 Sum_probs=201.8
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|++.+.||+|+||.||+|+. .+++.||||++..... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46899999999999999999976 5789999999864321 122235788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+ +|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 88 ~E~~-~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp ECCC-CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EECC-CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 9999 679999986653 489999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
. ......||+.|+|||.+.+..+ +.++||||+||++|+|++|+.||+....... ...+.......+
T Consensus 162 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-----------~~~i~~~~~~~p- 228 (336)
T 3h4j_B 162 N-FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-----------FKKVNSCVYVMP- 228 (336)
T ss_dssp B-TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-----------BCCCCSSCCCCC-
T ss_pred c-ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-----------HHHHHcCCCCCc-
Confidence 2 2345679999999999988776 6899999999999999999999864322111 001111111111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+.+++.+||..||++|||++|+++
T Consensus 229 -----~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 229 -----DFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp -----TTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred -----ccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 122345778899999999999999999875
No 114
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.5e-38 Score=343.07 Aligned_cols=253 Identities=31% Similarity=0.491 Sum_probs=203.0
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhH-----HHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQ-----KEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~-----~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
++|+..+.||+|+||+||+|+. .+++.||||++.......... +.+.+|+.++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 5799999999999999999976 478999999986533222211 67899999999999999999999997655
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCeEECCCCc-----eEEec
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP--IVHRDVSSKNVLLDFEYE-----AHVSD 835 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--iiH~dlkp~Nill~~~~~-----~kl~D 835 (964)
++||||+++|+|.+++.... ..+++..+..++.|++.|++|||++ + |+||||||+||+++.++. +||+|
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 69999999999999886543 4589999999999999999999999 8 999999999999988876 99999
Q ss_pred cCcccccCCCCCCccccccccccccccccc--cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 836 FGTAKLLKPDSSNWSELAGTYGYVAPELAY--TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 836 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
||+++.... ......|++.|+|||.+. ...++.++||||+|+++|||++|+.||..... .......
T Consensus 173 fg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~---------~~~~~~~ 240 (287)
T 4f0f_A 173 FGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY---------GKIKFIN 240 (287)
T ss_dssp CTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC---------CHHHHHH
T ss_pred CCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc---------cHHHHHH
Confidence 999975433 234567899999999984 45578999999999999999999999863221 1112222
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
........+.. ....+..+.+++.+||+.||++|||++++++.|+.
T Consensus 241 ~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 241 MIREEGLRPTI----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp HHHHSCCCCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHhccCCCCCC----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 22222222221 12334568889999999999999999999999874
No 115
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=6.7e-39 Score=353.88 Aligned_cols=256 Identities=22% Similarity=0.376 Sum_probs=193.1
Q ss_pred hhcccccceeecCCceeEEEEEeCCCC----eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee-
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGD----TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS- 762 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 762 (964)
.++|+..+.||+|+||.||+|+..... .||||+++.........+.+.+|+.++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 457999999999999999999765432 799999876544555567899999999999999999999999877654
Q ss_pred -----EEEEEeccCCCHHHHhhhcC----CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEE
Q 037111 763 -----FLVYEYLERGSLARILSSET----ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV 833 (964)
Q Consensus 763 -----~lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl 833 (964)
++||||+++|+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEE
Confidence 99999999999999996532 22589999999999999999999999 9999999999999999999999
Q ss_pred eccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhH
Q 037111 834 SDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNE 910 (964)
Q Consensus 834 ~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 910 (964)
+|||+++....... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-----------~~~ 247 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE-----------NAE 247 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----------GGG
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC-----------hHH
Confidence 99999987654332 1223456789999999999999999999999999999999 899975322 223
Q ss_pred HHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 911 AIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+......+. ....+..+.+++.+||+.||++|||+.++++.|+
T Consensus 248 ~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 294 (323)
T 3qup_A 248 IYNYLIGGNRLKQ-----PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294 (323)
T ss_dssp HHHHHHTTCCCCC-----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhcCCCCCC-----CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 3333333222211 1223456888999999999999999999999885
No 116
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-38 Score=355.99 Aligned_cols=252 Identities=19% Similarity=0.283 Sum_probs=207.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.+.|++.+.||+|+||.||+|..+ +|+.||+|++... .......+.+|+.++++++||||+++++++.+....++||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 127 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP--YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 127 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc--chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999765 6889999998643 2334467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC--CCceEEeccCcccccCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF--EYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~--~~~~kl~Dfg~a~~~~~ 844 (964)
||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+++....
T Consensus 128 E~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 128 EFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp ECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred EcCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 9999999999996543 3589999999999999999999999 9999999999999974 47899999999987654
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||... ...+....+.......+
T Consensus 204 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~-----------~~~~~~~~i~~~~~~~~- 270 (387)
T 1kob_A 204 DE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE-----------DDLETLQNVKRCDWEFD- 270 (387)
T ss_dssp TS-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-----------SHHHHHHHHHHCCCCCC-
T ss_pred Cc-ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC-----------CHHHHHHHHHhCCCCCC-
Confidence 43 234457999999999999999999999999999999999999998532 22233333333322211
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.........++.+++.+||..||++|||++++++
T Consensus 271 -~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 271 -EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp -SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred -ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 1111234456788999999999999999999986
No 117
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.3e-39 Score=368.81 Aligned_cols=259 Identities=21% Similarity=0.315 Sum_probs=207.8
Q ss_pred HHHHHHHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeec
Q 037111 681 YEEIIRSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH 758 (964)
Q Consensus 681 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 758 (964)
+.++....++|+..+.||+|+||+||+|+.+ +++.||+|++.+... .......+.+|+.++..++||||++++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3444455689999999999999999999876 478899999864211 11122347889999999999999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCc
Q 037111 759 ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 838 (964)
++..|+||||++||+|.+++... ...+++..++.++.||+.||+|||+. +||||||||+|||++.++.+||+|||+
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhh
Confidence 99999999999999999999753 24589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC-ccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHH
Q 037111 839 AKLLKPDSSN-WSELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912 (964)
Q Consensus 839 a~~~~~~~~~-~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 912 (964)
|+........ .....||+.|+|||++. ...++.++|||||||++|||++|+.||... ...+..
T Consensus 222 a~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~-----------~~~~~~ 290 (437)
T 4aw2_A 222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-----------SLVETY 290 (437)
T ss_dssp CEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS-----------SHHHHH
T ss_pred hhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC-----------ChhHHH
Confidence 9776544332 23467999999999987 556899999999999999999999998532 223333
Q ss_pred Hhhhc----cCCCCCccccchHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 037111 913 DHMFD----ARLPPPWLEVGVEDKLKSIIEVALSCVDANPER--RPNMQIVCK 959 (964)
Q Consensus 913 ~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--RPs~~evl~ 959 (964)
..+.. ..++... .....++.+++.+|+..+|++ ||+++|+++
T Consensus 291 ~~i~~~~~~~~~p~~~-----~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 291 GKIMNHKERFQFPTQV-----TDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHHHTHHHHCCCCSSC-----CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred HhhhhccccccCCccc-----ccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 33332 2222211 123345778888999888888 999999875
No 118
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=348.76 Aligned_cols=259 Identities=23% Similarity=0.364 Sum_probs=200.4
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||+||+|+.. +|+.||||++..........+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 367999999999999999999765 5899999998765555555677889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++++|.+++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.+.......
T Consensus 82 e~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 156 (311)
T 4agu_A 82 EYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156 (311)
T ss_dssp ECCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EeCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence 999999999988544 3489999999999999999999999 99999999999999999999999999998776555
Q ss_pred CCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhh---------
Q 037111 847 SNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF--------- 916 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------- 916 (964)
.......|++.|+|||.+.+ ..++.++||||+|+++|+|++|+.||........ ...+.+..
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 228 (311)
T 4agu_A 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ--------LYLIRKTLGDLIPRHQQ 228 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--------HHHHHHHHCSCCHHHHH
T ss_pred cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH--------HHHHHHHhccccccccc
Confidence 44556678999999999876 5689999999999999999999999854322100 00000000
Q ss_pred ---------ccCCCCCc----cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 917 ---------DARLPPPW----LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 917 ---------~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+.+. ...........+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 229 VFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 01111110 00011234456888999999999999999999975
No 119
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.5e-38 Score=341.30 Aligned_cols=253 Identities=20% Similarity=0.316 Sum_probs=209.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||.||+|..+ +++.||+|++............+.+|+.++++++||||+++++++.+++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 367999999999999999999764 6889999999765555556678899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc---eEEeccCcccccC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE---AHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~a~~~~ 843 (964)
||+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||.+....
T Consensus 85 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 9999999999987653 488999999999999999999999 9999999999999987655 9999999997665
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
... ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||.. .........+.......+
T Consensus 160 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~-----------~~~~~~~~~~~~~~~~~~ 227 (284)
T 3kk8_A 160 DSE-AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD-----------EDQHRLYAQIKAGAYDYP 227 (284)
T ss_dssp SSC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHTCCCCC
T ss_pred cCc-cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCC-----------CchhHHHHHHHhccccCC
Confidence 432 23456789999999999999999999999999999999999999753 222233333333332211
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. .........+.+++.+||++||++|||++|+++
T Consensus 228 ~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 228 S--PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp T--TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred c--hhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1 111233456788999999999999999999976
No 120
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.3e-39 Score=363.37 Aligned_cols=262 Identities=23% Similarity=0.376 Sum_probs=208.0
Q ss_pred HHHHHHhhcccccceeecCCceeEEEEEe------CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEe
Q 037111 682 EEIIRSINNFDESFCIGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYG 754 (964)
Q Consensus 682 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 754 (964)
.+.....++|++.+.||+|+||.||+|++ .+++.||||+++.. ......+.+.+|+.+++++ +||||+++++
T Consensus 15 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~~ 93 (359)
T 3vhe_A 15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLG 93 (359)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc-CCHHHHHHHHHHHHHHHhhcCCcceeeeee
Confidence 34444567899999999999999999963 34678999999753 2334456799999999999 7999999999
Q ss_pred eeecCc-eeEEEEEeccCCCHHHHhhhcCC--------------------------------------------------
Q 037111 755 FCSHAR-HSFLVYEYLERGSLARILSSETA-------------------------------------------------- 783 (964)
Q Consensus 755 ~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------- 783 (964)
++.+.+ ..++||||+++|+|.+++.....
T Consensus 94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (359)
T 3vhe_A 94 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSL 173 (359)
T ss_dssp EECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------
T ss_pred eeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccccc
Confidence 998765 58999999999999999976432
Q ss_pred --------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC--
Q 037111 784 --------------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS-- 847 (964)
Q Consensus 784 --------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 847 (964)
..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 250 (359)
T 3vhe_A 174 SDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 250 (359)
T ss_dssp ----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCE
T ss_pred chhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccch
Confidence 1288899999999999999999999 999999999999999999999999999986644332
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
......||+.|+|||++.+..++.++||||||+++|||+| |+.||..... .......+........
T Consensus 251 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----------~~~~~~~~~~~~~~~~--- 317 (359)
T 3vhe_A 251 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI----------DEEFCRRLKEGTRMRA--- 317 (359)
T ss_dssp EC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC----------SHHHHHHHHHTCCCCC---
T ss_pred hccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccch----------hHHHHHHHHcCCCCCC---
Confidence 2234567889999999999999999999999999999998 9999853221 1112222222111111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.......+.+++.+||+.||++|||+++|++.|+
T Consensus 318 --~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 351 (359)
T 3vhe_A 318 --PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 351 (359)
T ss_dssp --CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 1123345788899999999999999999999886
No 121
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5.6e-39 Score=355.46 Aligned_cols=255 Identities=19% Similarity=0.248 Sum_probs=206.3
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+|+.+++++ +||||+++++++..++..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 5799999999999999999975 5788999999864322 23578899999999 8999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc-----eEEeccCcccc
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE-----AHVSDFGTAKL 841 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~-----~kl~Dfg~a~~ 841 (964)
||+ +|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.
T Consensus 85 e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 85 ELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp ECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred EeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 999 89999999764 34599999999999999999999999 9999999999999999887 99999999987
Q ss_pred cCCCCCC-------ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHh
Q 037111 842 LKPDSSN-------WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDH 914 (964)
Q Consensus 842 ~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 914 (964)
....... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ....+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~--------~~~~~~~~~ 231 (330)
T 2izr_A 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA--------DTLKERYQK 231 (330)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC--------SSHHHHHHH
T ss_pred eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc--------ccHHHHHHH
Confidence 6543321 2356799999999999999999999999999999999999999864321 122233333
Q ss_pred hhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 915 MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+.....+.+. .......+ ++.+++.+||+.||++||++++|++.|+
T Consensus 232 i~~~~~~~~~-~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~ 277 (330)
T 2izr_A 232 IGDTKRATPI-EVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFT 277 (330)
T ss_dssp HHHHHHHSCH-HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred HHhhhccCCH-HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence 3222211110 00011123 7889999999999999999999999885
No 122
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.3e-38 Score=344.13 Aligned_cols=253 Identities=23% Similarity=0.375 Sum_probs=195.1
Q ss_pred hhcccccceeecCCceeEEEEEeCC----CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPS----GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
.++|+..+.||+|+||.||+|.... +..||+|++... ......+.+.+|+.++++++||||+++++++. ++..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 4679999999999999999997643 446999998653 23445577999999999999999999999985 46789
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 92 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccC
Confidence 9999999999999997543 3589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 844 PDSS-NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 844 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||.... ..+....+......
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~-----------~~~~~~~i~~~~~~ 236 (281)
T 1mp8_A 168 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK-----------NNDVIGRIENGERL 236 (281)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC-----------GGGHHHHHHTTCCC
T ss_pred cccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCC-----------HHHHHHHHHcCCCC
Confidence 4322 2233456789999999998899999999999999999997 899985322 12333333332221
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+. ....+..+.+++.+||+.||++|||+.++++.|+
T Consensus 237 ~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 272 (281)
T 1mp8_A 237 PM-----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 272 (281)
T ss_dssp CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC-----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11 1233456888999999999999999999999885
No 123
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3.6e-38 Score=345.89 Aligned_cols=260 Identities=23% Similarity=0.384 Sum_probs=200.4
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
..++|++.+.||+|+||.||+|.. .+|+.||||++.... ........+.+|+.++++++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 346799999999999999999975 578999999987532 334456788999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 765 VYEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
||||+++|+|.+++.. .....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999999965 2345589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
...........|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... .........+.....++
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---------~~~~~~~~~~~~~~~~~ 257 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---------MNLYSLCKKIEQCDYPP 257 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC------------CCHHHHHHHHHTTCSCC
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc---------hhHHHHHHHhhcccCCC
Confidence 654444445678999999999999999999999999999999999999985321 11223333333333332
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.. .......+.+++.+||+.||++|||+++|++.|+
T Consensus 258 ~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~ 293 (310)
T 2wqm_A 258 LP----SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAK 293 (310)
T ss_dssp CC----TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Cc----ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 11 1223456888999999999999999999999885
No 124
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=9.7e-39 Score=368.32 Aligned_cols=250 Identities=21% Similarity=0.287 Sum_probs=199.4
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... ........+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 56899999999999999999975 478999999987432 2233345678899999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH-ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp ECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 99999999999997654 48999999999999999999998 7 999999999999999999999999999987555
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||.. ....+....+.......+
T Consensus 302 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-----------~~~~~~~~~i~~~~~~~p- 369 (446)
T 4ejn_A 302 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN-----------QDHEKLFELILMEEIRFP- 369 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCCC-
T ss_pred CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC-----------CCHHHHHHHHHhCCCCCC-
Confidence 54555567899999999999999999999999999999999999999752 223344444444433322
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
......+.+++.+||+.||++|| +++|+++
T Consensus 370 -----~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 370 -----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp -----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -----ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 12335578889999999999999 9999875
No 125
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.3e-38 Score=341.36 Aligned_cols=251 Identities=23% Similarity=0.380 Sum_probs=208.2
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
++|+..+.||+|+||.||+|...+++.||+|++..... ..+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 57899999999999999999988888999999975332 346789999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC-C
Q 037111 769 LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS-S 847 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~-~ 847 (964)
+++|+|.+++.... ..+++..+..++.|+++|++|||+. +++||||||+||+++.++.+||+|||.+....... .
T Consensus 85 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~ 160 (267)
T 3t9t_A 85 MEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 160 (267)
T ss_dssp CTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred CCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccc
Confidence 99999999997643 3588999999999999999999999 99999999999999999999999999998664321 1
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||... ...+....+........
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----------~~~~~~~~i~~~~~~~~--- 226 (267)
T 3t9t_A 161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-----------SNSEVVEDISTGFRLYK--- 226 (267)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----------CHHHHHHHHHTTCCCCC---
T ss_pred ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC-----------CHHHHHHHHhcCCcCCC---
Confidence 1223456788999999998899999999999999999999 89997532 22333333333221111
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.......+.+++.+||+.||++||+++++++.|+
T Consensus 227 --~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (267)
T 3t9t_A 227 --PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 260 (267)
T ss_dssp --CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CccCcHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1123456788999999999999999999999885
No 126
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3e-39 Score=350.51 Aligned_cols=254 Identities=24% Similarity=0.409 Sum_probs=211.0
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
..++|+..+.||+|+||.||+|..+ ++..||+|++.. .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECS---CSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCc---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 4567999999999999999999765 478899999864 233457789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++|+|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+......
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 9999999999999887777799999999999999999999999 9999999999999999999999999999876544
Q ss_pred CC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 846 SS-NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 846 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
.. ......+++.|+|||.+.+..++.++||||+|+++|+|++ |..||.... .......+........
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~ 233 (288)
T 3kfa_A 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----------LSQVYELLEKDYRMER 233 (288)
T ss_dssp SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----------GGGHHHHHHTTCCCCC
T ss_pred ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----------HHHHHHHHhccCCCCC
Confidence 32 2233456788999999999999999999999999999999 889975322 1122222222111111
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+..+.+++.+||+.||++|||++++++.|+
T Consensus 234 -----~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~ 267 (288)
T 3kfa_A 234 -----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267 (288)
T ss_dssp -----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----CCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHH
Confidence 1223456888999999999999999999999885
No 127
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=8e-39 Score=345.42 Aligned_cols=256 Identities=24% Similarity=0.375 Sum_probs=208.9
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeee--cCceeEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCS--HARHSFL 764 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 764 (964)
.++|+..+.||+|+||.||+|+.+ +++.||+|++..........+.+.+|+.++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 468999999999999999999765 7899999999765545556678999999999999999999999874 4568999
Q ss_pred EEEeccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-----eEeccCCCCCeEECCCCceEEeccC
Q 037111 765 VYEYLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPP-----IVHRDVSSKNVLLDFEYEAHVSDFG 837 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-----iiH~dlkp~Nill~~~~~~kl~Dfg 837 (964)
||||+++|+|.+++... ....+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999999753 334589999999999999999999998 7 9999999999999999999999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
.++.............|++.|+|||.+.+..++.++||||||+++|+|++|+.||... ...+....+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----------~~~~~~~~i~~ 230 (279)
T 2w5a_A 162 LARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF-----------SQKELAGKIRE 230 (279)
T ss_dssp HHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS-----------SHHHHHHHHHH
T ss_pred hheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc-----------CHHHHHHHHhh
Confidence 9987654433334457899999999999989999999999999999999999997532 22233334433
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...+.. ....+..+.+++.+||+.||++||+++|+++.+.
T Consensus 231 ~~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 231 GKFRRI-----PYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp TCCCCC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred cccccC-----CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 333211 1123456888999999999999999999998653
No 128
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.1e-38 Score=350.52 Aligned_cols=256 Identities=25% Similarity=0.422 Sum_probs=208.9
Q ss_pred hhcccccceeecCCceeEEEEEe------CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCc
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHAR 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 760 (964)
.++|+..+.||+|+||.||+|+. .+++.||||++.... .....+.+.+|+.+++++ +||||+++++++.+++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 35799999999999999999974 356789999987532 334457899999999999 8999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCC----------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeE
Q 037111 761 HSFLVYEYLERGSLARILSSETA----------------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVL 824 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nil 824 (964)
..++||||+++|+|.+++..... ..+++..+..++.|+++||+|||++ +|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence 99999999999999999976542 2489999999999999999999999 9999999999999
Q ss_pred ECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCC
Q 037111 825 LDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDS 901 (964)
Q Consensus 825 l~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~ 901 (964)
++.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||.....
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---- 253 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV---- 253 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS----
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc----
Confidence 999999999999999876654332 223457789999999999999999999999999999999 9999753221
Q ss_pred CCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 902 SLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
................ ....+..+.+++.+||+.||++|||++++++.|+
T Consensus 254 -------~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 303 (313)
T 1t46_A 254 -------DSKFYKMIKEGFRMLS----PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303 (313)
T ss_dssp -------SHHHHHHHHHTCCCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -------hhHHHHHhccCCCCCC----cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 1112222222221111 1123456888999999999999999999999986
No 129
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.9e-38 Score=363.47 Aligned_cols=249 Identities=24% Similarity=0.377 Sum_probs=208.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|...+.||+|+||.||+|+.. +|+.||||++..... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 467999999999999999999765 799999999864321 223356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++|+|.+++... ..+++..+..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 95 ~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 95 MEYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 9999999999999653 4589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
. ......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||+.. ........+.......+.
T Consensus 170 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~-----------~~~~~~~~i~~~~~~~p~ 237 (476)
T 2y94_A 170 E-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD-----------HVPTLFKKICDGIFYTPQ 237 (476)
T ss_dssp C-CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCS-----------SSHHHHHHHHTTCCCCCT
T ss_pred c-cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCC-----------CHHHHHHHHhcCCcCCCc
Confidence 2 2345679999999999988776 68999999999999999999998632 223444455444433221
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+.+++.+||..||++|||++++++
T Consensus 238 ------~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 238 ------YLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ------TCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ------cCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 12345778899999999999999999985
No 130
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=342.98 Aligned_cols=252 Identities=23% Similarity=0.388 Sum_probs=184.6
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
..++|++.+.||+|+||.||+|+. .+|+.||||++..... .......+.+|+.++++++||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 356899999999999999999976 5789999999864321 22234678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++++|.+++.... ..+++..+..++.|+++|++|||++ +++||||||+||+++.++.+||+|||.+.....
T Consensus 89 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EEECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 999999999999997543 4589999999999999999999999 999999999999999999999999999987664
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.........|++.|+|||.+.+..++.++||||+|+++|||++|+.||...... +............+
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----------~~~~~~~~~~~~~~- 232 (278)
T 3cok_A 165 PHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK-----------NTLNKVVLADYEMP- 232 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------------CCSSCCCCC-
T ss_pred CCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH-----------HHHHHHhhcccCCc-
Confidence 444444567899999999999988999999999999999999999998643221 11111111111111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....++.+++.+||+.||++||+++++++
T Consensus 233 -----~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 233 -----SFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp -----TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 112345778999999999999999999975
No 131
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=354.11 Aligned_cols=249 Identities=22% Similarity=0.306 Sum_probs=200.6
Q ss_pred ccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEec
Q 037111 691 FDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYL 769 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 769 (964)
|...+.||+|+||.||+|.. .+|+.||+|+++.. .....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 168 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR--GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECC--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEccc--ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence 34467899999999999975 46899999998743 2344578999999999999999999999999999999999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE--CCCCceEEeccCcccccCCCCC
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL--DFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill--~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++.......
T Consensus 169 ~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~ 244 (373)
T 2x4f_A 169 DGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK 244 (373)
T ss_dssp TTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB
T ss_pred CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc
Confidence 9999999986543 3488999999999999999999999 99999999999999 6678999999999987654432
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.. ....+....+.......+. .
T Consensus 245 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~-----------~~~~~~~~~i~~~~~~~~~--~ 310 (373)
T 2x4f_A 245 -LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG-----------DNDAETLNNILACRWDLED--E 310 (373)
T ss_dssp -CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCC-----------SSHHHHHHHHHHTCCCSCS--G
T ss_pred -cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCC-----------CCHHHHHHHHHhccCCCCh--h
Confidence 3345799999999999988999999999999999999999999753 2233444555444433221 1
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+.+++.+||..||++|||++|+++
T Consensus 311 ~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 311 EFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 12234456888999999999999999999986
No 132
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.3e-38 Score=354.14 Aligned_cols=252 Identities=23% Similarity=0.278 Sum_probs=196.2
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||+||+|+.+ +++.||||++..... ....+.+|+.++++++||||+++++++.+.+..++||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 457999999999999999999765 789999999865322 2356789999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc--eEEeccCcccccCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE--AHVSDFGTAKLLKP 844 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~--~kl~Dfg~a~~~~~ 844 (964)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++....
T Consensus 96 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 96 EYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred EeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 9999999999996644 489999999999999999999999 9999999999999987765 99999999975432
Q ss_pred CCCCccccccccccccccccccCCCCcc-hhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEK-CDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~-sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
.. ......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||..... ..........+.......+
T Consensus 171 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-------~~~~~~~~~~~~~~~~~~~ 242 (361)
T 3uc3_A 171 HS-QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE-------PRDYRKTIQRILSVKYSIP 242 (361)
T ss_dssp -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC-----------CCCHHHHHHHHHTTCCCCC
T ss_pred cC-CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCcc-------HHHHHHHHHHHhcCCCCCC
Confidence 22 2234579999999999988887765 8999999999999999999864322 1222344444444333322
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.. ......+.+++.+||..||++|||+.|+++
T Consensus 243 ~~----~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 243 DD----IRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp TT----SCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred Cc----CCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 11 112345778899999999999999999975
No 133
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.3e-38 Score=347.42 Aligned_cols=256 Identities=17% Similarity=0.242 Sum_probs=206.7
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||.||+|+. .+++.||||++..... ...+.+|+..++.+ +|++++++++++.++...++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 85 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 85 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence 5799999999999999999975 5789999999864322 23577899999998 7999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc-----eEEeccCcccc
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE-----AHVSDFGTAKL 841 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~-----~kl~Dfg~a~~ 841 (964)
||+ +|+|.+++.... ..+++..+..++.||++||+|||++ +|+||||||+||+++.++. +||+|||+++.
T Consensus 86 e~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 86 DLL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp ECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred Eec-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 999 899999997643 3489999999999999999999999 9999999999999988776 99999999987
Q ss_pred cCCCCC-------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHh
Q 037111 842 LKPDSS-------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDH 914 (964)
Q Consensus 842 ~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 914 (964)
...... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ....+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--------~~~~~~~~~ 232 (298)
T 1csn_A 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA--------ATNKQKYER 232 (298)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS--------CCHHHHHHH
T ss_pred cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhc--------cccHHHHHH
Confidence 654432 12345799999999999999999999999999999999999999864322 112222222
Q ss_pred hhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 915 MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+.....+.+. .......+..+.+++.+||+.||++||++++|++.|+
T Consensus 233 ~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 233 IGEKKQSTPL-RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 279 (298)
T ss_dssp HHHHHHHSCH-HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred HHhhccCccH-HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 2222111110 1111234467889999999999999999999999885
No 134
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.8e-38 Score=367.32 Aligned_cols=251 Identities=23% Similarity=0.319 Sum_probs=208.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+.+ +|+.||+|++..... .......+..|+.++++++||||+++++++.+.+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999775 699999999864321 223346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 766 YEYLERGSLARILSSET--ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
|||++||+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999997643 44689999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||..... .....+....+.......+
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~-------~~~~~~~~~~i~~~~~~~p 413 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE-------KVENKELKQRVLEQAVTYP 413 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC-------CCCHHHHHHHHHHCCCCCC
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCcc-------chhHHHHHHHHhhcccCCC
Confidence 555444556899999999999999999999999999999999999999864321 1122334444444333221
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNM 954 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~ 954 (964)
......+.+++.+||..||++||++
T Consensus 414 ------~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 414 ------DKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp ------TTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred ------cccCHHHHHHHHHhccCCHhHCCCC
Confidence 1234557788889999999999975
No 135
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.6e-39 Score=353.18 Aligned_cols=265 Identities=18% Similarity=0.267 Sum_probs=193.7
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
++|+..+.||+|+||+||+|+.. +++.||||++..... ......+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc-cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 57999999999999999999765 789999999864321 1111245579999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 155 (324)
T 3mtl_A 81 YLDK-DLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 155 (324)
T ss_dssp CCSE-EHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred cccc-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcc
Confidence 9975 9999987653 3588999999999999999999999 999999999999999999999999999987665544
Q ss_pred Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccc-------------CCCCCCCChhHHHH
Q 037111 848 NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS-------------DSSLPGANMNEAID 913 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~-------------~~~~~~~~~~~~~~ 913 (964)
......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||....... ...++.........
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 235 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhc
Confidence 4556678999999999876 568999999999999999999999986432110 00000000000000
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....................++.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 236 TYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000000000000111123456788999999999999999999975
No 136
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=352.50 Aligned_cols=250 Identities=20% Similarity=0.292 Sum_probs=190.5
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||.||+|+.+ +++.||||++.... ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 127 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL 127 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence 457999999999999999999775 57889999987432 2356788999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC---CCceEEeccCcccccC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF---EYEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~a~~~~ 843 (964)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 128 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~ 202 (349)
T 2w4o_A 128 ELVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202 (349)
T ss_dssp CCCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred EeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence 999999999999654 3489999999999999999999999 9999999999999975 8899999999998664
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ........+........
T Consensus 203 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----------~~~~~~~~i~~~~~~~~ 271 (349)
T 2w4o_A 203 HQV-LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER----------GDQFMFRRILNCEYYFI 271 (349)
T ss_dssp -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT----------CHHHHHHHHHTTCCCCC
T ss_pred ccc-ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc----------ccHHHHHHHHhCCCccC
Confidence 332 2335578999999999999999999999999999999999999985322 11223334433332211
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.........++.+++.+||..||++|||+.++++
T Consensus 272 --~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 272 --SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp --TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111234456788999999999999999999986
No 137
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=6.1e-38 Score=345.67 Aligned_cols=253 Identities=19% Similarity=0.285 Sum_probs=209.1
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCch----hhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGET----THQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS 762 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 762 (964)
.++|++.+.||+|+||.||+|+.+ +|+.||||++....... .....+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 457999999999999999999765 68999999987543221 2357899999999999999999999999999999
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC----ceEEeccCc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY----EAHVSDFGT 838 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~ 838 (964)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 9999999999999999653 3588999999999999999999999 999999999999999888 799999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (964)
+....... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.. ....+....+...
T Consensus 166 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~-----------~~~~~~~~~i~~~ 233 (321)
T 2a2a_A 166 AHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG-----------DTKQETLANITSV 233 (321)
T ss_dssp CEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC-----------SSHHHHHHHHHTT
T ss_pred ceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC-----------CCHHHHHHHHHhc
Confidence 98765432 23455789999999999999999999999999999999999999752 2223344444333
Q ss_pred CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 919 RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 919 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+ ..........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 234 SYDFD--EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCCCC--HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ccccC--hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 32221 1111233456788999999999999999999986
No 138
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.6e-38 Score=350.73 Aligned_cols=255 Identities=23% Similarity=0.397 Sum_probs=207.8
Q ss_pred hhcccccceeecCCceeEEEEEeC--------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeec
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP--------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSH 758 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 758 (964)
.++|+..+.||+|+||.||+|+.. ++..||||++... ........+.+|+.+++++ +||||+++++++.+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC-CcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 468999999999999999999763 5678999998753 2344557789999999999 89999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeE
Q 037111 759 ARHSFLVYEYLERGSLARILSSETA--------------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVL 824 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nil 824 (964)
.+..++||||+++|+|.+++..... ..+++..++.++.||++||+|||+. +|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEE
Confidence 9999999999999999999976432 2488999999999999999999999 9999999999999
Q ss_pred ECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCC
Q 037111 825 LDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDS 901 (964)
Q Consensus 825 l~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~ 901 (964)
++.++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~------ 263 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI------ 263 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC------
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC------
Confidence 999999999999999876544321 223456789999999998889999999999999999999 99997532
Q ss_pred CCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 902 SLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...+....+........ ...+...+.+++.+||+.||++||+++++++.|+
T Consensus 264 -----~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 314 (334)
T 2pvf_A 264 -----PVEELFKLLKEGHRMDK-----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314 (334)
T ss_dssp -----CHHHHHHHHHHTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----CHHHHHHHHhcCCCCCC-----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 22233333322221111 1123456888999999999999999999999885
No 139
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.9e-38 Score=350.50 Aligned_cols=250 Identities=21% Similarity=0.337 Sum_probs=199.2
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCC--CceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH--RNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||.||+|..++++.||||++............+.+|+.++++++| |||+++++++.++...++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 4699999999999999999998889999999997655555666789999999999976 99999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
|+ .+|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++ ++.+||+|||+++......
T Consensus 89 e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 89 EC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp CC-CSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred eC-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 94 578999999764 3588999999999999999999999 999999999999997 6889999999998765443
Q ss_pred C--Ccccccccccccccccccc-----------CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 847 S--NWSELAGTYGYVAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 847 ~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .......
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----------~~~~~~~ 231 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII----------NQISKLH 231 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC----------SHHHHHH
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh----------hHHHHHH
Confidence 2 2235579999999999865 678999999999999999999999985321 1112233
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
............. .....+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~----~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 232 AIIDPNHEIEFPD----IPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp HHHCTTSCCCCCC----CSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhcCCcccCCcc----cCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 3333322221111 11245778889999999999999999975
No 140
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.6e-39 Score=364.51 Aligned_cols=254 Identities=21% Similarity=0.339 Sum_probs=206.7
Q ss_pred HHHHHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc
Q 037111 683 EIIRSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR 760 (964)
Q Consensus 683 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (964)
++....++|+..+.||+|+||+||+|+.+ +++.||+|++.+... .......+.+|+.+++.++||||+++++++.+++
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 34445678999999999999999999765 588999999864211 1122245788999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
..|+||||++||+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 999999999999999999653 488999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CccccccccccccccccccCC----CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhh
Q 037111 841 LLKPDSS-NWSELAGTYGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHM 915 (964)
Q Consensus 841 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~~----~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 915 (964)
....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.. ....+....+
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~-----------~~~~~~~~~i 285 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA-----------DSLVGTYSKI 285 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC-----------SSHHHHHHHH
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC-----------CChhhHHHHH
Confidence 7654432 233567999999999998765 78999999999999999999999852 2223334444
Q ss_pred hcc----CCCCCccccchHHHHHHHHHHHHHccCCCCCC--CCCHHHHHH
Q 037111 916 FDA----RLPPPWLEVGVEDKLKSIIEVALSCVDANPER--RPNMQIVCK 959 (964)
Q Consensus 916 ~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--RPs~~evl~ 959 (964)
... ..+.. .....++.+++.+|+..+|++ ||+++||++
T Consensus 286 ~~~~~~~~~p~~------~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 286 MNHKNSLTFPDD------NDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HTHHHHCCCCTT------CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred HhccccccCCCc------ccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 332 22211 122345778888999999998 999999975
No 141
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.6e-38 Score=343.08 Aligned_cols=252 Identities=22% Similarity=0.409 Sum_probs=207.0
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||.||+|...+++.||||++.... .....+.+|+.++++++||||+++++++.+ +..++|||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e 87 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITE 87 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc---ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEe
Confidence 35799999999999999999998888899999986432 234678999999999999999999999874 56899999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.......+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||.+........
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 99999999999765444589999999999999999999999 999999999999999999999999999987654332
Q ss_pred -CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 848 -NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 848 -~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
......+++.|+|||.+.+..++.++||||||+++|||++ |+.||... ...+....+........
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-----------~~~~~~~~~~~~~~~~~-- 231 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----------TNPEVIQNLERGYRMVR-- 231 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTC-----------CHHHHHHHHHTTCCCCC--
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCccc-----------CHHHHHHHHhcccCCCC--
Confidence 1223456788999999998889999999999999999999 89997532 22233333322211111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+..+.+++.+||+.||++|||++++++.|+
T Consensus 232 ---~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 265 (279)
T 1qpc_A 232 ---PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (279)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---cccccHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 1223456888999999999999999999999885
No 142
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-38 Score=355.21 Aligned_cols=257 Identities=24% Similarity=0.401 Sum_probs=205.7
Q ss_pred HhhcccccceeecCCceeEEEEEe------CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecC
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHA 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 759 (964)
..++|+..+.||+|+||.||+|+. .++..||||++.... .......+.+|+.+++++ +||||+++++++...
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 346899999999999999999975 245679999997432 233346789999999999 899999999999999
Q ss_pred ceeEEEEEeccCCCHHHHhhhcCC---------------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccC
Q 037111 760 RHSFLVYEYLERGSLARILSSETA---------------------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDV 818 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dl 818 (964)
+..++||||+++|+|.+++..... ..+++..+..++.||+.||+|||++ +|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 999999999999999999976432 2378999999999999999999999 9999999
Q ss_pred CCCCeEECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcc
Q 037111 819 SSKNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLL 895 (964)
Q Consensus 819 kp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~ 895 (964)
||+||+++.++.+||+|||++......... .....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999999999866544322 234457889999999999999999999999999999998 99998532
Q ss_pred ccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 896 SSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.. .............++. ....+..+.+++.+||+.||++|||+.++++.|+
T Consensus 279 ~~-----------~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 279 PV-----------DANFYKLIQNGFKMDQ----PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp CC-----------SHHHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Cc-----------HHHHHHHHhcCCCCCC----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 21 1222222222222111 1123456888999999999999999999999885
No 143
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=4.2e-38 Score=339.74 Aligned_cols=249 Identities=27% Similarity=0.462 Sum_probs=203.0
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
+.++|++.+.||+|+||.||+|... +++.||||++.... ........+.+|+.++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 4578999999999999999999665 57789999986432 122234678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 87 v~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp EECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 999999999999997653 488999999999999999999999 999999999999999999999999999865433
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 845 DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
. ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||.. ....+....+.......+
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~-----------~~~~~~~~~~~~~~~~~~- 227 (279)
T 3fdn_A 162 S--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-----------NTYQETYKRISRVEFTFP- 227 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC-----------SSHHHHHHHHHHTCCCCC-
T ss_pred c--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCC-----------CcHHHHHHHHHhCCCCCC-
Confidence 2 22345789999999999999999999999999999999999999752 222333333333332221
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+.+++.+||+.||++|||++|+++
T Consensus 228 -----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 228 -----DFVTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp -----TTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred -----CcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 113345778899999999999999999986
No 144
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.6e-38 Score=352.11 Aligned_cols=252 Identities=20% Similarity=0.290 Sum_probs=205.0
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 764 (964)
..++|+..+.||+|+||.||+|..+ +++.||||++..... ...+|++++.++ +||||+++++++.+++..|+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 3567999999999999999999765 688999999875322 234677787776 79999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC----CceEEeccCccc
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE----YEAHVSDFGTAK 840 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~----~~~kl~Dfg~a~ 840 (964)
||||++||+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||++..+ +.+||+|||+++
T Consensus 94 v~E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp EECCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 99999999999999654 3489999999999999999999999 99999999999998543 359999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 841 LLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 841 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
.............||+.|+|||++.+..++.++||||+||++|||++|+.||.... .....+....+.....
T Consensus 169 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~~~~i~~~~~ 240 (342)
T 2qr7_A 169 QLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP--------DDTPEEILARIGSGKF 240 (342)
T ss_dssp ECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST--------TSCHHHHHHHHHHCCC
T ss_pred cCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC--------cCCHHHHHHHHccCCc
Confidence 77665555556789999999999988889999999999999999999999986321 1233344555544444
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+. .........+.+++.+||+.||++||++.++++
T Consensus 241 ~~~~--~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 241 SLSG--GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp CCCS--TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ccCc--cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 3221 111233456788899999999999999999874
No 145
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.5e-38 Score=368.31 Aligned_cols=255 Identities=23% Similarity=0.272 Sum_probs=209.4
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+.+ +|+.||||++.... ........+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999765 79999999986432 1223346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||++||+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 9999999999999876666699999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .....+....+.......+
T Consensus 340 ~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~-------~~~~~~i~~~i~~~~~~~p-- 409 (576)
T 2acx_A 340 Q-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK-------KIKREEVERLVKEVPEEYS-- 409 (576)
T ss_dssp C-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSS-------CCCHHHHHHHHHHCCCCCC--
T ss_pred c-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccccc-------chhHHHHHHHhhcccccCC--
Confidence 3 23455899999999999998999999999999999999999999864221 1112222333322222111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRP-----NMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~ 959 (964)
.....++.+++.+||..||++|| +++||++
T Consensus 410 ----~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 410 ----ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ----TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ----ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 12335578888899999999999 6788764
No 146
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.7e-38 Score=347.14 Aligned_cols=264 Identities=23% Similarity=0.370 Sum_probs=206.2
Q ss_pred hcccccceeecCCceeEEEEEe-----CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--ce
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-----PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--RH 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~ 761 (964)
+.|+..+.||+|+||.||+|++ .+++.||||++.... .......+.+|+.++++++||||+++++++.+. ..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 4588999999999999999983 468899999987533 333457889999999999999999999999876 66
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccccc
Confidence 899999999999999996543 3489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC---CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc---CCCCCCCCh-hHHHHh
Q 037111 842 LKPDSS---NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS---DSSLPGANM-NEAIDH 914 (964)
Q Consensus 842 ~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~---~~~~~~~~~-~~~~~~ 914 (964)
...... ......+|+.|+|||.+.+..++.++||||+|+++|||++|+.|+....... ......... ......
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (302)
T 4e5w_A 176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT 255 (302)
T ss_dssp CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence 765432 2234567888999999999999999999999999999999999864322110 001111111 122222
Q ss_pred hhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 915 MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+......+. ....+..+.+++.+||+.||++|||++++++.|+
T Consensus 256 ~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 298 (302)
T 4e5w_A 256 LKEGKRLPC-----PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298 (302)
T ss_dssp HHTTCCCCC-----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HhccCCCCC-----CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 222211111 1233456888999999999999999999999986
No 147
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.6e-38 Score=351.17 Aligned_cols=252 Identities=23% Similarity=0.380 Sum_probs=197.1
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCe----EEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDT----VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
++|+..+.||+|+||+||+|++. +++. ||+|.+... ......+.+.+|+.++++++||||+++++++.++. .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 57999999999999999999754 4443 588877542 23344578999999999999999999999998754 78
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+|+||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 9999999999999997644 4589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 844 PDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 844 ~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
..... .....+|+.|+|||.+.+..++.++|||||||++|||+| |+.||..... .+....+.....
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----------~~~~~~~~~~~~ 237 (327)
T 3poz_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----------SEISSILEKGER 237 (327)
T ss_dssp TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----------GGHHHHHHTTCC
T ss_pred CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH-----------HHHHHHHHcCCC
Confidence 44332 223456889999999999999999999999999999999 9999863221 122222211111
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+. ...+...+.+++.+||+.||++||+++++++.|+
T Consensus 238 ~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~ 274 (327)
T 3poz_A 238 LPQ-----PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CCC-----CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred CCC-----CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 111 1123456888999999999999999999998874
No 148
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-37 Score=345.58 Aligned_cols=271 Identities=24% Similarity=0.359 Sum_probs=202.9
Q ss_pred HHHHHhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhC--CCCCceeeEEeeeecC-
Q 037111 683 EIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTG--VRHRNIVKFYGFCSHA- 759 (964)
Q Consensus 683 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~- 759 (964)
......++|++.+.||+|+||.||+|+.. ++.||||++... ....+..|.+++.. ++||||+++++++...
T Consensus 31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp HHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred cccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 33445578999999999999999999886 899999998532 12344455555544 4899999999999877
Q ss_pred ---ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC-----CCCeEeccCCCCCeEECCCCce
Q 037111 760 ---RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC-----RPPIVHRDVSSKNVLLDFEYEA 831 (964)
Q Consensus 760 ---~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~iiH~dlkp~Nill~~~~~~ 831 (964)
...++||||+++|+|.++++.. .+++..+..++.|++.||+|||+.. +++|+||||||+||+++.++.+
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 6899999999999999999654 4889999999999999999999762 3489999999999999999999
Q ss_pred EEeccCcccccCCCCCC----ccccccccccccccccccCCCCcc------hhHHHHHHHHHHHHhCCCCCCccccccCC
Q 037111 832 HVSDFGTAKLLKPDSSN----WSELAGTYGYVAPELAYTMKVTEK------CDVYSFGVLALEVIKGQHPKDLLSSLSDS 901 (964)
Q Consensus 832 kl~Dfg~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~------sDvwSlGvll~el~tg~~p~~~~~~~~~~ 901 (964)
||+|||+++........ .....||+.|+|||.+.+..++.+ +|||||||++|||+||..|+.........
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 99999999766543322 124579999999999987766655 99999999999999995554322221110
Q ss_pred ----CCCCCChhHHHHhhhccCCCCCc-cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 902 ----SLPGANMNEAIDHMFDARLPPPW-LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 902 ----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....................+.. .......++..+.+++.+||+.||++|||+++|++.|+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 327 (337)
T 3mdy_A 262 YHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327 (337)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHH
Confidence 00111112222222222222211 11223477888999999999999999999999999985
No 149
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=6.2e-38 Score=354.31 Aligned_cols=250 Identities=21% Similarity=0.341 Sum_probs=200.5
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC--CCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR--HRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 766 (964)
..|++.+.||+|+||.||+|..++++.||||++............+.+|+.++++++ ||||+++++++..++..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 459999999999999999999888999999999765555556678999999999996 599999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
| +.+|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+++......
T Consensus 136 E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp E-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred e-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9 56789999997654 588889999999999999999999 999999999999995 6899999999998765443
Q ss_pred C--Ccccccccccccccccccc-----------CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 847 S--NWSELAGTYGYVAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 847 ~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .....+.
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~----------~~~~~~~ 278 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII----------NQISKLH 278 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC----------CHHHHHH
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh----------HHHHHHH
Confidence 2 2235579999999999865 368899999999999999999999985321 1123333
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+.......+.... ....+.+++.+||..||++||+++|+++
T Consensus 279 ~~~~~~~~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 279 AIIDPNHEIEFPDI----PEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp HHHCTTSCCCCCCC----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhCccccCCCCcc----chHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 44433322211111 1345778899999999999999999975
No 150
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.1e-38 Score=349.95 Aligned_cols=253 Identities=25% Similarity=0.365 Sum_probs=196.8
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc----ee
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR----HS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~ 762 (964)
++|++.+.||+|+||.||+|+. .+++.||||++.... ........+.+|+.++++++||||+++++++.... ..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 5799999999999999999975 578899999997543 23344567899999999999999999999987654 34
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
|+||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred EEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 99999999999999997654 489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC---CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 843 KPDSS---NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 843 ~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||... ...+.........
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~-----------~~~~~~~~~~~~~ 235 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD-----------SPVSVAYQHVRED 235 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-----------SHHHHHHHHHHCC
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC-----------ChHHHHHHHhcCC
Confidence 54322 223456899999999999999999999999999999999999998532 2223333332222
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..++ .......+.++.+++.+||+.||++||++.+++.
T Consensus 236 ~~~~--~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 236 PIPP--SARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp CCCH--HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred CCCc--ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 2221 1111234456888999999999999998766653
No 151
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-38 Score=345.04 Aligned_cols=251 Identities=29% Similarity=0.507 Sum_probs=196.6
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|++.+.||+|+||.||+|+.. ++.||||++.. ....+.+.+|+.++++++||||+++++++.+ ..++|||
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e 79 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES----ESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVME 79 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSS----TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEE
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecC----hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEE
Confidence 357899999999999999999885 78899999863 2345788999999999999999999999874 4799999
Q ss_pred eccCCCHHHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc-eEEeccCcccccCCC
Q 037111 768 YLERGSLARILSSETA-TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE-AHVSDFGTAKLLKPD 845 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~-~kl~Dfg~a~~~~~~ 845 (964)
|+++|+|.+++..... ..+++..+..++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred cCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 9999999999976432 24788899999999999999999943339999999999999998886 799999999765432
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
.....|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ..............++.
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~~-- 225 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG---------PAFRIMWAVHNGTRPPL-- 225 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS---------SHHHHHHHHHTTCCCCC--
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc---------cHHHHHHHHhcCCCCCc--
Confidence 2234689999999999999999999999999999999999999863221 11122222222222211
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+..+.+++.+||+.||++|||++++++.|+
T Consensus 226 ---~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 259 (307)
T 2eva_A 226 ---IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259 (307)
T ss_dssp ---BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 1223456788999999999999999999999875
No 152
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=369.83 Aligned_cols=348 Identities=18% Similarity=0.180 Sum_probs=214.3
Q ss_pred ceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCc
Q 037111 230 TKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGN 309 (964)
Q Consensus 230 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 309 (964)
+.++.+++.++ .+|..+ .++++.|+|++|+|++..+..|.++++|++|+|++|.+++..|..|.++++|+.|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~--~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCC--CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCC--CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 56777888877 556544 357888888888888777778888888888888888888777888888888888888888
Q ss_pred cCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCc
Q 037111 310 QFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSS 389 (964)
Q Consensus 310 ~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~ 389 (964)
++++..+..|..+++|++|++++|.+.+..+..|.++++|+.|++++|.+++..+..|..+++|+.|+|++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 88877666667777777777777777766666777777777777777777666666666666666666666666655555
Q ss_pred cccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCC
Q 037111 390 NWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDL 469 (964)
Q Consensus 390 ~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 469 (964)
.+..+++|+.|+|++|.+.+..+..|..+++|++|++++|.+.+.+|.......+|+.|+|++|.++...+..+..+++
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~- 249 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVY- 249 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTT-
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccc-
Confidence 5555555555555555555555555555555555555555554444444444445555555555555333334444444
Q ss_pred CceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCC
Q 037111 470 GYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHN 549 (964)
Q Consensus 470 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 549 (964)
|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|
T Consensus 250 -----------------------L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 306 (477)
T 2id5_A 250 -----------------------LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGN 306 (477)
T ss_dssp -----------------------CCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSS
T ss_pred -----------------------cCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCC
Confidence 445555555544444444555555555555555555555555555555555555555
Q ss_pred cCCCcccccccccccceEEEecCCcccccCCCCccCCCCCcccccCCCCccCCCC
Q 037111 550 NLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEVS 604 (964)
Q Consensus 550 ~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~ 604 (964)
+|++..+..|..+++|+.|++++|+|.|..+..-.++......+.++...|+.+.
T Consensus 307 ~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 307 QLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp CCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred cCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 5555555555555555566666666555433211111122233455566665543
No 153
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.1e-37 Score=336.23 Aligned_cols=250 Identities=22% Similarity=0.304 Sum_probs=206.9
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||.||+|..+ ++..||+|++..... .....+.+|+.++++++||||+++++++.+.+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM 85 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc--chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence 467999999999999999999765 577899999875332 33567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE---CCCCceEEeccCcccccC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL---DFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a~~~~ 843 (964)
||+++++|.+++.... .+++..+..++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||.+....
T Consensus 86 e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 86 ELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp ECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred eccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 9999999999997643 488999999999999999999999 99999999999999 788999999999998765
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
... ......||+.|+|||.+.+. ++.++||||+|+++|||++|+.||... ...+....+.......+
T Consensus 161 ~~~-~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~-----------~~~~~~~~~~~~~~~~~ 227 (277)
T 3f3z_A 161 PGK-MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAP-----------TDSEVMLKIREGTFTFP 227 (277)
T ss_dssp TTS-CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCS-----------SHHHHHHHHHHCCCCCC
T ss_pred Ccc-chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCC-----------CHHHHHHHHHhCCCCCC
Confidence 443 23455799999999998654 899999999999999999999997532 22344444444443332
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. .........+.+++.+||+.||++|||+.++++
T Consensus 228 ~--~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 228 E--KDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp H--HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred c--hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 111234466888999999999999999999874
No 154
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.4e-38 Score=350.82 Aligned_cols=259 Identities=22% Similarity=0.280 Sum_probs=204.2
Q ss_pred HHHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc---CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc
Q 037111 685 IRSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT---GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR 760 (964)
Q Consensus 685 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (964)
....++|+..+.||+|+||.||+|.. .+++.||+|++.... ......+.+.+|+.++++++||||+++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 34567899999999999999999976 468899999986431 23345578999999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcC--------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 037111 761 HSFLVYEYLERGSLARILSSET--------------------------------------ATEMDWSKRVNVIKGVAHAL 802 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~--------------------------------------~~~l~~~~~~~i~~~i~~~l 802 (964)
..++||||+++|+|.+++.... ...+++..+..++.||++||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 9999999999999999985210 11235677889999999999
Q ss_pred HHHhhCCCCCeEeccCCCCCeEECCCC--ceEEeccCcccccCCCCC----Ccccccccccccccccccc--CCCCcchh
Q 037111 803 SYMHHECRPPIVHRDVSSKNVLLDFEY--EAHVSDFGTAKLLKPDSS----NWSELAGTYGYVAPELAYT--MKVTEKCD 874 (964)
Q Consensus 803 ~~LH~~~~~~iiH~dlkp~Nill~~~~--~~kl~Dfg~a~~~~~~~~----~~~~~~g~~~y~aPE~~~~--~~~~~~sD 874 (964)
+|||+. +|+||||||+||+++.++ .+||+|||+++....... ......||+.|+|||.+.+ ..++.++|
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 999999 999999999999998776 899999999986543221 2345679999999999875 67899999
Q ss_pred HHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCH
Q 037111 875 VYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNM 954 (964)
Q Consensus 875 vwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~ 954 (964)
|||||+++|||++|+.||.. ....+....+.......+. .........+.+++.+||+.||++||++
T Consensus 259 iwslG~il~el~~g~~pf~~-----------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~ 325 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPG-----------VNDADTISQVLNKKLCFEN--PNYNVLSPLARDLLSNLLNRNVDERFDA 325 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCTTS--GGGGGSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred HHHHHHHHHHHHHCCCCCCC-----------CChHHHHHHHHhcccccCC--cccccCCHHHHHHHHHHcCCChhHCCCH
Confidence 99999999999999999752 2233444444444433221 1122344568889999999999999999
Q ss_pred HHHHH
Q 037111 955 QIVCK 959 (964)
Q Consensus 955 ~evl~ 959 (964)
.++++
T Consensus 326 ~~~l~ 330 (345)
T 3hko_A 326 MRALQ 330 (345)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99986
No 155
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.8e-38 Score=349.07 Aligned_cols=266 Identities=21% Similarity=0.308 Sum_probs=212.0
Q ss_pred CcccHHHHHHHhhccccc-ceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEE
Q 037111 677 GKLVYEEIIRSINNFDES-FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFY 753 (964)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~ 753 (964)
+...+.......+.|.+. +.||+|+||.||+|..+ +++.||+|++............+.+|+.+++.+. ||||++++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 344444555566678887 88999999999999765 6899999999765555555678999999999884 79999999
Q ss_pred eeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC---CCc
Q 037111 754 GFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF---EYE 830 (964)
Q Consensus 754 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~---~~~ 830 (964)
+++.+.+..++||||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.
T Consensus 96 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp EEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCC
T ss_pred EEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCc
Confidence 9999999999999999999999999766566799999999999999999999999 9999999999999998 789
Q ss_pred eEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhH
Q 037111 831 AHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNE 910 (964)
Q Consensus 831 ~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~ 910 (964)
+||+|||+++...... ......|++.|+|||.+.+..++.++||||+|+++|||++|+.||... ...+
T Consensus 173 ~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-----------~~~~ 240 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGE-----------DNQE 240 (327)
T ss_dssp EEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----------SHHH
T ss_pred EEEeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----------CchH
Confidence 9999999998765432 233457999999999999999999999999999999999999997532 2223
Q ss_pred HHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 911 AIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+.......+ ..........+.+++.+||+.||++|||++++++
T Consensus 241 ~~~~i~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 241 TYLNISQVNVDYS--EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHHHHHHTCCCCC--TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHhcccccC--chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 3333322222211 1112234456788899999999999999999875
No 156
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=344.35 Aligned_cols=257 Identities=23% Similarity=0.347 Sum_probs=200.1
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccC---chhhHHHHHHHHHHHhCC---CCCceeeEEeeeecC
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTG---ETTHQKEFLSEIKALTGV---RHRNIVKFYGFCSHA 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~ 759 (964)
..++|++.+.||+|+||+||+|+. .+++.||||++..... .......+.+|+.+++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356899999999999999999976 4789999999864321 111224566777776665 599999999999775
Q ss_pred c-----eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEe
Q 037111 760 R-----HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVS 834 (964)
Q Consensus 760 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~ 834 (964)
. ..++||||+. |+|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 4 5899999997 5999999877666699999999999999999999999 99999999999999999999999
Q ss_pred ccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHh
Q 037111 835 DFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDH 914 (964)
Q Consensus 835 Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 914 (964)
|||+++...... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||..... .+....
T Consensus 163 Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----------~~~~~~ 230 (308)
T 3g33_A 163 DFGLARIYSYQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE-----------ADQLGK 230 (308)
T ss_dssp SCSCTTTSTTCC-CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH-----------HHHHHH
T ss_pred eCccccccCCCc-ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHH
Confidence 999998665332 23456789999999999999999999999999999999999999853221 111211
Q ss_pred hhc---cCCC------------------CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 915 MFD---ARLP------------------PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 915 ~~~---~~~~------------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+.. .... +........+....+.+++.+||+.||++|||+.|+++
T Consensus 231 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 231 IFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 111 0000 00001111233456788999999999999999999975
No 157
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=8.6e-38 Score=340.07 Aligned_cols=250 Identities=20% Similarity=0.350 Sum_probs=209.2
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+.+ +++.||+|++.... ........+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 357999999999999999999765 57889999986542 2344557788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++++|.+++.... .+++..+..++.|+++|++|||++ +|+||||||+||+++.++.+||+|||.+......
T Consensus 94 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 99999999999986543 488999999999999999999999 9999999999999999999999999999877655
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
........|++.|+|||.+.+..++.++||||+|+++|+|++|+.||.... ..+....+.......+
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----------~~~~~~~~~~~~~~~~-- 235 (294)
T 2rku_A 169 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-----------LKETYLRIKKNEYSIP-- 235 (294)
T ss_dssp TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-----------HHHHHHHHHTTCCCCC--
T ss_pred ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----------HHHHHHHHhhccCCCc--
Confidence 444455678999999999999889999999999999999999999985322 2233333333332211
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+.+++.+||+.||++|||++++++
T Consensus 236 ----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 236 ----KHINPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp ----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ----cccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 122345778889999999999999999875
No 158
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.3e-38 Score=350.15 Aligned_cols=258 Identities=20% Similarity=0.303 Sum_probs=193.4
Q ss_pred HHHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 685 IRSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 685 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
....++|++.+.||+|+||+||+|+. .+++.||||++............+.+|+.++++++||||+++++++.+++..+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 34567899999999999999999965 47889999999755444444567889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC-----CCCceEEeccCc
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD-----FEYEAHVSDFGT 838 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~-----~~~~~kl~Dfg~ 838 (964)
+||||+++ +|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++ .++.+||+|||+
T Consensus 110 lv~e~~~~-~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EEEECCSE-EHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EEEecCCC-CHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 99999985 9999997654 488999999999999999999999 999999999999994 455699999999
Q ss_pred ccccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
++.............||+.|+|||.+.+. .++.++||||+||++|||++|+.||..... .+....+..
T Consensus 184 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----------~~~~~~~~~ 252 (329)
T 3gbz_A 184 ARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE-----------IDQLFKIFE 252 (329)
T ss_dssp HHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHH
T ss_pred ccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH-----------HHHHHHHHH
Confidence 98776554445566789999999999875 489999999999999999999999853221 111111110
Q ss_pred c---C-----------------CCC----CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 A---R-----------------LPP----PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~---~-----------------~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. . .+. ............++.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 253 VLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0 0 000 0000000113356788999999999999999999986
No 159
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=4.9e-38 Score=345.30 Aligned_cols=257 Identities=23% Similarity=0.373 Sum_probs=198.6
Q ss_pred HhhcccccceeecCCceeEEEEEeC----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc--
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR-- 760 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 760 (964)
..++|+..+.||+|+||.||+|+.. +++.||||++..........+.+.+|+.++++++||||+++++++.+..
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 3467999999999999999999654 3447999998765555555678999999999999999999999997754
Q ss_pred ---eeEEEEEeccCCCHHHHhhh----cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEE
Q 037111 761 ---HSFLVYEYLERGSLARILSS----ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV 833 (964)
Q Consensus 761 ---~~~lv~e~~~~gsL~~~l~~----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl 833 (964)
..++||||+++|+|.+++.. .....+++..++.++.|+++||+|||++ +|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEE
Confidence 35999999999999999853 2335689999999999999999999999 9999999999999999999999
Q ss_pred eccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhH
Q 037111 834 SDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNE 910 (964)
Q Consensus 834 ~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 910 (964)
+|||+++....... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----------~~~ 257 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ-----------NHE 257 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----------GGG
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC-----------HHH
Confidence 99999987654322 1223457889999999999999999999999999999999 888875322 223
Q ss_pred HHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 911 AIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+.....+.. ....+..+.+++.+||+.||++||+++++++.|+
T Consensus 258 ~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 304 (313)
T 3brb_A 258 MYDYLLHGHRLKQ-----PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLE 304 (313)
T ss_dssp HHHHHHTTCCCCC-----BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHcCCCCCC-----CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 3333333322211 1233456888999999999999999999999885
No 160
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.3e-38 Score=338.86 Aligned_cols=248 Identities=22% Similarity=0.332 Sum_probs=182.9
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... ........+.+|+.++++++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 35899999999999999999975 478999999986542 2333456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+ ++++.+++... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 92 ~e~~-~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 92 IEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EECC-CEEHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred ehhc-CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 9999 66888888654 3489999999999999999999999 9999999999999999999999999999765543
Q ss_pred CCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.. .....||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||... ........+.......+
T Consensus 166 ~~-~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----------~~~~~~~~~~~~~~~~~- 232 (275)
T 2eue_A 166 NF-LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-----------SIPVLFKNISNGVYTLP- 232 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCS-----------SHHHHHHHHHHTCCCCC-
T ss_pred cc-ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCC-----------CHHHHHHHHHhCCCCCC-
Confidence 22 234568999999999988765 68999999999999999999998532 22333333333333221
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+.+++.+||+.||++|||++|+++
T Consensus 233 -----~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 233 -----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -----TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----ccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 123345778899999999999999999874
No 161
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=5.3e-38 Score=342.68 Aligned_cols=257 Identities=23% Similarity=0.345 Sum_probs=203.9
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+.+ +|+.||||++............+.+|+.++++++||||+++++++..++..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 468999999999999999999765 7899999998654433334467889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+. |+|.+++.......+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||.+.......
T Consensus 82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 9998 5999999877666789999999999999999999999 99999999999999999999999999998765544
Q ss_pred CCccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc-------
Q 037111 847 SNWSELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA------- 918 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 918 (964)
.......+++.|+|||.+.+.. ++.++||||||+++|+|++|+.||..... .+....+...
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----------~~~~~~~~~~~~~~~~~ 226 (299)
T 2r3i_A 158 RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-----------IDQLFRIFRTLGTPDEV 226 (299)
T ss_dssp BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----------HHHHHHHHHHHCCCCTT
T ss_pred cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH-----------HHHHHHHHHHhCCCchh
Confidence 4444557899999999998765 78999999999999999999999864321 1111111110
Q ss_pred -------------CCCC---CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 919 -------------RLPP---PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 919 -------------~~~~---~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+. ............++.+++.+|++.||++|||++++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000 0000001123456788999999999999999999986
No 162
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.7e-38 Score=346.43 Aligned_cols=253 Identities=28% Similarity=0.462 Sum_probs=200.2
Q ss_pred hcccccceeecCCceeEEEEEeCC-----CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPS-----GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
.+|+..+.||+|+||.||+|..+. +..||||+++... .......+.+|+.++++++||||+++++++.+.+..+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 457778999999999999997642 2359999987532 3444567899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 123 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 198 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198 (333)
T ss_dssp EEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence 9999999999999997543 4589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 844 PDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 844 ~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
..... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||... ...+....+....
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~-----------~~~~~~~~~~~~~ 267 (333)
T 1mqb_A 199 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL-----------SNHEVMKAINDGF 267 (333)
T ss_dssp ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----------CHHHHHHHHHTTC
T ss_pred cccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC-----------CHHHHHHHHHCCC
Confidence 43221 122346788999999998899999999999999999999 99997532 2233334433332
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+. ....+..+.+++.+||+.||++||+++++++.|+
T Consensus 268 ~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 305 (333)
T 1mqb_A 268 RLPT-----PMDCPSAIYQLMMQCWQQERARRPKFADIVSILD 305 (333)
T ss_dssp CCCC-----CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred cCCC-----cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 2211 1233456888999999999999999999999885
No 163
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=7.6e-39 Score=359.33 Aligned_cols=263 Identities=17% Similarity=0.265 Sum_probs=198.4
Q ss_pred hhcccccceeecCCceeEEEEEeCC------CCeEEEEEeccccCchhh---------HHHHHHHHHHHhCCCCCceeeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPS------GDTVAVKKLHSFTGETTH---------QKEFLSEIKALTGVRHRNIVKF 752 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~---------~~~~~~E~~~l~~l~h~niv~l 752 (964)
.++|++.+.||+|+||.||+|.++. ++.||||++......... ...+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 3579999999999999999997754 478999998653211111 1234456677888899999999
Q ss_pred EeeeecC----ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC--
Q 037111 753 YGFCSHA----RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD-- 826 (964)
Q Consensus 753 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~-- 826 (964)
++++... ...++||||+ +|+|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+||+++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESS
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecC
Confidence 9998764 4589999999 99999999764 34599999999999999999999999 999999999999999
Q ss_pred CCCceEEeccCcccccCCCCCC-------ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc
Q 037111 827 FEYEAHVSDFGTAKLLKPDSSN-------WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS 899 (964)
Q Consensus 827 ~~~~~kl~Dfg~a~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~ 899 (964)
.++.+||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 8899999999999766433211 123459999999999999999999999999999999999999986322110
Q ss_pred CCCC-CCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 900 DSSL-PGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 900 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.... ........+....+..++. ...+.++.+++..||+.||++||++++|++.|+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~ 325 (364)
T 3op5_A 269 KYVRDSKIRYRENIASLMDKCFPA-------ANAPGEIAKYMETVKLLDYTEKPLYENLRDILL 325 (364)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHSCT-------TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhhhhHHHHHHHhccc-------ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 0000 0000000011111111110 122456888999999999999999999999885
No 164
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.4e-38 Score=348.12 Aligned_cols=258 Identities=20% Similarity=0.360 Sum_probs=210.9
Q ss_pred HHhhcccccceeecCCceeEEEEEeC------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELP------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA 759 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 759 (964)
...++|+..+.||+|+||.||+|... +++.||||++.... .......+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 34578999999999999999999654 36789999987532 334456789999999999999999999999999
Q ss_pred ceeEEEEEeccCCCHHHHhhhcC--------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCce
Q 037111 760 RHSFLVYEYLERGSLARILSSET--------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEA 831 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~ 831 (964)
+..++||||+++|+|.+++.... ...+++..+.+++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCE
T ss_pred CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeE
Confidence 99999999999999999997532 24578999999999999999999999 99999999999999999999
Q ss_pred EEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCCh
Q 037111 832 HVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANM 908 (964)
Q Consensus 832 kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~ 908 (964)
||+|||+++........ .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||.. ...
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~-----------~~~ 246 (322)
T 1p4o_A 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG-----------LSN 246 (322)
T ss_dssp EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT-----------SCH
T ss_pred EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCcccc-----------CCH
Confidence 99999999765433221 223356889999999999999999999999999999999 8888753 222
Q ss_pred hHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 909 NEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.+....+........ ....+..+.+++.+||+.||++|||+.++++.|+.
T Consensus 247 ~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~ 296 (322)
T 1p4o_A 247 EQVLRFVMEGGLLDK-----PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296 (322)
T ss_dssp HHHHHHHHTTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGG
T ss_pred HHHHHHHHcCCcCCC-----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 334444433333221 12334568889999999999999999999999864
No 165
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.5e-38 Score=349.22 Aligned_cols=267 Identities=24% Similarity=0.406 Sum_probs=201.2
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+.. +|+.||||++..........+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 568999999999999999999765 5899999998765555555677889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++++|.++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 104 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 104 EFVDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp ECCSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecCCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 999999999887543 3489999999999999999999999 99999999999999999999999999998766555
Q ss_pred CCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCC-----CCC--ChhHHHHh--hh
Q 037111 847 SNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSL-----PGA--NMNEAIDH--MF 916 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~-----~~~--~~~~~~~~--~~ 916 (964)
.......|++.|+|||.+.+. .++.++||||+||++|+|++|+.||........... ... ........ ..
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 445566799999999998875 689999999999999999999999864322100000 000 00000000 00
Q ss_pred c-cCCCC----CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 917 D-ARLPP----PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 917 ~-~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ...+. .............+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 00110 0001111234567889999999999999999998874
No 166
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=6.8e-38 Score=354.99 Aligned_cols=252 Identities=20% Similarity=0.272 Sum_probs=192.4
Q ss_pred hhccccc-ceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHH-hCCCCCceeeEEeeeec----Cc
Q 037111 688 INNFDES-FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKAL-TGVRHRNIVKFYGFCSH----AR 760 (964)
Q Consensus 688 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~ 760 (964)
.++|... +.||+|+||+||+|..+ +++.||||++... ..+.+|+.++ +..+||||+++++++.. ..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 3567766 68999999999999765 6889999998631 3466788876 45589999999999875 56
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC---CCceEEeccC
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF---EYEAHVSDFG 837 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg 837 (964)
..|+||||++||+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecc
Confidence 789999999999999999876666799999999999999999999999 9999999999999998 7899999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .......+..
T Consensus 210 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-------~~~~~~~i~~ 281 (400)
T 1nxk_A 210 FAKETTSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-------SPGMKTRIRM 281 (400)
T ss_dssp TCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSS-------CCSHHHHHHH
T ss_pred cccccCCCC-ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccc-------cHHHHHHHHc
Confidence 998655332 23456789999999999999999999999999999999999999864332111 0011122222
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+. ........++.+++.+||+.||++|||++|+++
T Consensus 282 ~~~~~~~--~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 282 GQYEFPN--PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp TCCCCCT--TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CcccCCC--cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2221110 011234456788999999999999999999986
No 167
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=6.2e-38 Score=340.60 Aligned_cols=253 Identities=26% Similarity=0.373 Sum_probs=203.1
Q ss_pred hhcccccc-eeecCCceeEEEEEe---CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 688 INNFDESF-CIGRGGYGSVYKAEL---PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 688 ~~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
.++|++.+ .||+|+||.||+|.+ .+++.||||++..........+.+.+|+.+++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35788887 999999999999954 2467899999976544455567899999999999999999999999 567789
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 94 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 999999999999999764 3488999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCc---cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 844 PDSSNW---SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 844 ~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
...... ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+....+....
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----------~~~~~~~~~~~~ 237 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-----------GSEVTAMLEKGE 237 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC-----------HHHHHHHHHTTC
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC-----------HHHHHHHHHcCC
Confidence 443321 22346788999999998889999999999999999999 999975322 222233322222
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+.. ....+..+.+++.+||+.||++||++.++++.|+
T Consensus 238 ~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 238 RMGC-----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp CCCC-----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111 1233456888999999999999999999999886
No 168
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.5e-37 Score=336.17 Aligned_cols=252 Identities=19% Similarity=0.312 Sum_probs=204.6
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCc----hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE----TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
++|+..+.||+|+||.||+|+.+ +++.||+|.++..... ....+.+.+|+.++++++||||+++++++.+....+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 57999999999999999999775 6899999998754322 223578999999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC----ceEEeccCcc
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY----EAHVSDFGTA 839 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~----~~kl~Dfg~a 839 (964)
+||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++ .+||+|||.+
T Consensus 85 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 9999999999999996543 489999999999999999999999 999999999999999877 8999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 840 KLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 840 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
....... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||... ...+....+....
T Consensus 160 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----------~~~~~~~~~~~~~ 227 (283)
T 3bhy_A 160 HKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE-----------TKQETLTNISAVN 227 (283)
T ss_dssp EECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS-----------SHHHHHHHHHTTC
T ss_pred eeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc-----------chHHHHHHhHhcc
Confidence 8765432 233456899999999999999999999999999999999999997532 2223333333322
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+ .......+..+.+++.+||+.||++||++.++++
T Consensus 228 ~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 228 YDFD--EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp CCCC--HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cCCc--chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 2211 1111233456788999999999999999999986
No 169
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=6.6e-38 Score=348.28 Aligned_cols=247 Identities=26% Similarity=0.434 Sum_probs=201.6
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
..|+..+.||+|+||.||+|+. .+++.||||++.... ........+.+|+.++++++||||+++++++.+++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588999999999999999975 578899999986532 23344567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+. |++.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-
T ss_pred ecCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-
Confidence 9997 58888886443 4589999999999999999999999 9999999999999999999999999999866433
Q ss_pred CCccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 847 SNWSELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
....||+.|+|||++. +..++.++|||||||++|||++|+.||.... .......+.....+..
T Consensus 208 ---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~-----------~~~~~~~~~~~~~~~~ 273 (348)
T 1u5q_A 208 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----------AMSALYHIAQNESPAL 273 (348)
T ss_dssp ---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----------HHHHHHHHHHSCCCCC
T ss_pred ---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----------hHHHHHHHHhcCCCCC
Confidence 2457899999999984 5678999999999999999999999975321 2222333333222211
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. .......+.+++.+||+.||++|||++++++
T Consensus 274 ~----~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 274 Q----SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp C----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred C----CCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 1 1123345778888999999999999999875
No 170
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7e-38 Score=343.10 Aligned_cols=258 Identities=20% Similarity=0.292 Sum_probs=199.3
Q ss_pred HHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
...++|++.+.||+|+||.||+|+.. +++.||+|++..... .......+.+|+.++++++||||+++++++..++..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 34678999999999999999999765 688999999875432 3334577899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++++|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 111 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 9999999999999997653 488999999999999999999999 99999999999999999999999999997665
Q ss_pred CCC-CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 844 PDS-SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 844 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ..+........+.
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------------~~~~~~~~~~~~~ 253 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL------------SVMGAHINQAIPR 253 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH------------HHHHHHHHSCCCC
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH------------HHHHHHhccCCCC
Confidence 432 223355789999999999999999999999999999999999999853211 1222222222221
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhc
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRP-NMQIVCKLLS 962 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RP-s~~evl~~L~ 962 (964)
+ .......+..+.+++.+||+.||++|| +++++++.|+
T Consensus 254 ~--~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~ 292 (309)
T 2h34_A 254 P--STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAH 292 (309)
T ss_dssp G--GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred c--cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHH
Confidence 1 111223445688899999999999999 9999999885
No 171
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-38 Score=357.05 Aligned_cols=260 Identities=23% Similarity=0.295 Sum_probs=207.0
Q ss_pred HHHHHHHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeec
Q 037111 681 YEEIIRSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH 758 (964)
Q Consensus 681 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 758 (964)
.++.....++|+..+.||+|+||.||+|+.+ +|+.||||++.+... .......+.+|..++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444455789999999999999999999775 789999999864221 12223457889999999999999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCc
Q 037111 759 ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 838 (964)
.+..|+||||++||+|.+++.... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++++||+|||+
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGl 208 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGS 208 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechh
Confidence 999999999999999999997643 3589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC-ccccccccccccccccc-------cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhH
Q 037111 839 AKLLKPDSSN-WSELAGTYGYVAPELAY-------TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNE 910 (964)
Q Consensus 839 a~~~~~~~~~-~~~~~g~~~y~aPE~~~-------~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~ 910 (964)
++........ .....||+.|+|||++. +..++.++|||||||++|||++|+.||... ...+
T Consensus 209 a~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~-----------~~~~ 277 (412)
T 2vd5_A 209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYAD-----------STAE 277 (412)
T ss_dssp CEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCS-----------SHHH
T ss_pred heeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCC-----------CHHH
Confidence 9876554332 23457999999999987 356899999999999999999999998532 2233
Q ss_pred HHHhhhcc--CCCCCccccchHHHHHHHHHHHHHccCCCCCCC---CCHHHHHH
Q 037111 911 AIDHMFDA--RLPPPWLEVGVEDKLKSIIEVALSCVDANPERR---PNMQIVCK 959 (964)
Q Consensus 911 ~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R---Ps~~evl~ 959 (964)
....+... ....+.. ....+.++.+++.+||. +|++| |+++|+++
T Consensus 278 ~~~~i~~~~~~~~~p~~---~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 278 TYGKIVHYKEHLSLPLV---DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHHHHTHHHHCCCC-------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHHHHhcccCcCCCcc---ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 33333321 1111110 11234567788889999 99998 58888864
No 172
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-38 Score=354.78 Aligned_cols=252 Identities=26% Similarity=0.405 Sum_probs=191.8
Q ss_pred cccccceeecCCceeEEEEEeC--CC--CeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec-CceeEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP--SG--DTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH-ARHSFL 764 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~l 764 (964)
.|+..+.||+|+||.||+|+.. ++ ..||||.+... ......+.+.+|+.++++++||||+++++++.. ++..++
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC-SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 5777889999999999999764 22 35899988643 334456789999999999999999999998754 568899
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++|+|.+++.... ..+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 169 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 244 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244 (373)
T ss_dssp EEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccc
Confidence 999999999999996543 4478899999999999999999999 999999999999999999999999999986643
Q ss_pred CCCC----ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 845 DSSN----WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 845 ~~~~----~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
.... .....+++.|+|||.+.+..++.++||||||+++|||+| |..||..... .+....+....
T Consensus 245 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~-----------~~~~~~~~~~~ 313 (373)
T 3c1x_A 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----------FDITVYLLQGR 313 (373)
T ss_dssp -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS-----------SCHHHHHHTTC
T ss_pred cccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH-----------HHHHHHHHcCC
Confidence 3211 123457789999999999999999999999999999999 5666643221 11222222222
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.... ...++..+.+++.+||+.||++||+++++++.|+
T Consensus 314 ~~~~-----p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~ 351 (373)
T 3c1x_A 314 RLLQ-----PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 351 (373)
T ss_dssp CCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111 1123456888999999999999999999999885
No 173
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.4e-38 Score=374.27 Aligned_cols=252 Identities=27% Similarity=0.462 Sum_probs=208.8
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|++.+.||+|+||.||+|+++.+..||||+++... ...+.|.+|+.++++++||||+++++++.+ +..++|||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 45788999999999999999999878889999997532 234679999999999999999999999976 67899999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++|+|.+++.......+++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 418 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 418 (535)
T ss_dssp CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence 99999999999765445689999999999999999999999 999999999999999999999999999986653211
Q ss_pred -CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhcc-CCCCCc
Q 037111 848 -NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPW 924 (964)
Q Consensus 848 -~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 924 (964)
......++..|+|||.+.+..++.++|||||||++|||++ |+.||.. ....+....+... +.+.+
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~-----------~~~~~~~~~i~~~~~~~~~- 486 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG-----------MVNREVLDQVERGYRMPCP- 486 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTT-----------CCHHHHHHHHHTTCCCCCC-
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----------CCHHHHHHHHHcCCCCCCC-
Confidence 1123346788999999999999999999999999999999 8999752 2223334333322 12211
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
..++..+.+++.+||+.||++|||+++|++.|+.
T Consensus 487 -----~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 520 (535)
T 2h8h_A 487 -----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 520 (535)
T ss_dssp -----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 2344568889999999999999999999999863
No 174
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.2e-38 Score=349.82 Aligned_cols=251 Identities=25% Similarity=0.386 Sum_probs=198.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCe----EEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDT----VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
++|+..+.||+|+||+||+|++. +++. ||+|.+.... .......+.+|+.++++++||||+++++++. +...+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 47899999999999999999754 4554 7788775432 2222346778999999999999999999986 46689
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 91 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp EEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred EEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccC
Confidence 999999999999999754 23588899999999999999999999 99999999999999999999999999998775
Q ss_pred CCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC-
Q 037111 844 PDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR- 919 (964)
Q Consensus 844 ~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 919 (964)
.... ......+++.|+|||.+.+..++.++||||||+++|||+| |+.||..... .+....+....
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----------~~~~~~~~~~~~ 235 (325)
T 3kex_A 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-----------AEVPDLLEKGER 235 (325)
T ss_dssp CCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT-----------THHHHHHHTTCB
T ss_pred cccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH-----------HHHHHHHHcCCC
Confidence 4432 2344567889999999999999999999999999999999 9999863221 12222222211
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...+ ..+...+.+++.+||..||++||+++++++.|+
T Consensus 236 ~~~~------~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~ 272 (325)
T 3kex_A 236 LAQP------QICTIDVYMVMVKCWMIDENIRPTFKELANEFT 272 (325)
T ss_dssp CCCC------TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHH
T ss_pred CCCC------CcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111 112334778899999999999999999999875
No 175
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=9.9e-38 Score=345.98 Aligned_cols=250 Identities=20% Similarity=0.348 Sum_probs=209.0
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|...+.||+|+||.||+++.. +++.||+|++.... ........+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 357999999999999999999765 57889999986542 2344567789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 120 ~e~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp ECCCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 99999999999986543 488999999999999999999999 9999999999999999999999999999877655
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
........|++.|+|||.+.+..++.++||||||+++|||++|+.||... ...+....+.......+
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----------~~~~~~~~~~~~~~~~~-- 261 (335)
T 2owb_A 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-----------CLKETYLRIKKNEYSIP-- 261 (335)
T ss_dssp TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS-----------SHHHHHHHHHHTCCCCC--
T ss_pred cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC-----------CHHHHHHHHhcCCCCCC--
Confidence 44455667999999999999989999999999999999999999998532 12233333333322211
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+.+++.+||+.||++||+++|+++
T Consensus 262 ----~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 262 ----KHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp ----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ----ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112345778889999999999999999875
No 176
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.2e-37 Score=357.22 Aligned_cols=265 Identities=22% Similarity=0.330 Sum_probs=201.0
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC-----cee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA-----RHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 762 (964)
++|++.+.||+|+||.||+|+.+ +++.||||++..........+.+.+|+.++++++||||+++++++... ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 57999999999999999999764 678899999976555556667899999999999999999999999776 578
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
|+||||+. |+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+..
T Consensus 106 ~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEECCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEecCC-cCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 99999997 5999999653 4589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC----------------------Ccccccccccccccccc-ccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc
Q 037111 843 KPDSS----------------------NWSELAGTYGYVAPELA-YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS 899 (964)
Q Consensus 843 ~~~~~----------------------~~~~~~g~~~y~aPE~~-~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~ 899 (964)
..... ......||+.|+|||++ ....++.++||||+||++|||++|..||.......
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~ 259 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNR 259 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccc
Confidence 54321 12456789999999986 56669999999999999999999877765432222
Q ss_pred CCCCCCCC-----------------hhHHHHhhh------------------------ccC-CCCCccccchHHHHHHHH
Q 037111 900 DSSLPGAN-----------------MNEAIDHMF------------------------DAR-LPPPWLEVGVEDKLKSII 937 (964)
Q Consensus 900 ~~~~~~~~-----------------~~~~~~~~~------------------------~~~-~~~~~~~~~~~~~~~~l~ 937 (964)
...+++.. ....+..++ ... ..+.............+.
T Consensus 260 ~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 339 (432)
T 3n9x_A 260 FPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGI 339 (432)
T ss_dssp CCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHH
T ss_pred cccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHH
Confidence 22222211 000011000 000 000000111122345678
Q ss_pred HHHHHccCCCCCCCCCHHHHHH
Q 037111 938 EVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 938 ~li~~cl~~dp~~RPs~~evl~ 959 (964)
+++.+||..||++|||++|+++
T Consensus 340 dLl~~mL~~dP~~R~ta~e~L~ 361 (432)
T 3n9x_A 340 NLLESMLKFNPNKRITIDQALD 361 (432)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHhcCCcccCCCHHHHhc
Confidence 8999999999999999999985
No 177
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=347.82 Aligned_cols=244 Identities=22% Similarity=0.357 Sum_probs=202.6
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCch------hhHHHHHHHHHHHhCCCCCceeeEEeeeecC
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGET------THQKEFLSEIKALTGVRHRNIVKFYGFCSHA 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 759 (964)
..++|+..+.||+|+||.||+|+. .+++.||||++....... .....+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 456899999999999999999975 478899999987543211 1334577899999999999999999999999
Q ss_pred ceeEEEEEeccCC-CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCc
Q 037111 760 RHSFLVYEYLERG-SLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 760 ~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 838 (964)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeeccc
Confidence 9999999999777 9999996543 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
+........ .....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||...... ..
T Consensus 177 a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----------------~~ 238 (335)
T 3dls_A 177 AAYLERGKL-FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-----------------VE 238 (335)
T ss_dssp CEECCTTCC-BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----------------TT
T ss_pred ceECCCCCc-eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----------------Hh
Confidence 987654432 345679999999999988877 78999999999999999999998642221 11
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....++. ....++.+++.+||++||++|||++++++
T Consensus 239 ~~~~~~~------~~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 239 AAIHPPY------LVSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp TCCCCSS------CCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hccCCCc------ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111111 12345788899999999999999999986
No 178
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=366.27 Aligned_cols=311 Identities=20% Similarity=0.145 Sum_probs=278.3
Q ss_pred CCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCC
Q 037111 77 QFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLS 155 (964)
Q Consensus 77 ~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~ 155 (964)
.+|.+..++++.|||++|++++..|..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|++++.++. +..++
T Consensus 25 ~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 104 (477)
T 2id5_A 25 AVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLS 104 (477)
T ss_dssp SCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCT
T ss_pred cCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCC
Confidence 45666778999999999999998889999999999999999999988899999999999999999999988775 78999
Q ss_pred CCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeecc
Q 037111 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELS 235 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 235 (964)
+|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|+
T Consensus 105 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~ 184 (477)
T 2id5_A 105 NLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLR 184 (477)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEE
T ss_pred CCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCC
Confidence 99999999999998889999999999999999999998888899999999999999999998887889999999999999
Q ss_pred ccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccC
Q 037111 236 NNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFL 315 (964)
Q Consensus 236 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 315 (964)
+|.+.+..+..|..+++|+.|++++|.+.+.+|.......+|+.|+|++|++++..+..+..+++|+.|+|++|++++..
T Consensus 185 ~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 264 (477)
T 2id5_A 185 HLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIE 264 (477)
T ss_dssp SCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEEC
T ss_pred CCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccC
Confidence 99999887788899999999999999888778877777779999999999998554467888999999999999999888
Q ss_pred CcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeecccc
Q 037111 316 PQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGEL 387 (964)
Q Consensus 316 p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~ 387 (964)
+..+..+.+|+.|++++|.+.+..|..|.++++|+.|+|++|+++++.+..|..+++|+.|+|++|++.+..
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 265 GSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp TTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred hhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCcc
Confidence 888888888888888888888888888888888888888888888888888888888888888888887654
No 179
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=9e-38 Score=340.66 Aligned_cols=253 Identities=26% Similarity=0.383 Sum_probs=199.2
Q ss_pred hcccccceeecCCceeEEEEEeCCC----CeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeee-ecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSG----DTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC-SHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~ 763 (964)
.+|+..+.||+|+||.||+|+..+. ..||+|.+... ......+.+.+|+.++++++||||+++++++ ..++..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC-CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 4688899999999999999976422 25899988753 3344557899999999999999999999986 4556889
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 104 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~ 179 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 179 (298)
T ss_dssp EEEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred EEEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccccc
Confidence 999999999999999653 34588999999999999999999999 99999999999999999999999999998665
Q ss_pred CCCC----CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCC-CCCCccccccCCCCCCCChhHHHHhhhcc
Q 037111 844 PDSS----NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQ-HPKDLLSSLSDSSLPGANMNEAIDHMFDA 918 (964)
Q Consensus 844 ~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (964)
.... ......+|+.|+|||.+.+..++.++||||+|+++|||++|+ .||.... ..+....+...
T Consensus 180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-----------~~~~~~~~~~~ 248 (298)
T 3f66_A 180 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----------TFDITVYLLQG 248 (298)
T ss_dssp CGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC-----------TTTHHHHHHTT
T ss_pred ccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC-----------HHHHHHHHhcC
Confidence 4321 123345778999999999999999999999999999999955 4543211 11222222222
Q ss_pred CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 919 RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 919 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..... ....+..+.+++.+||+.||++|||++++++.|+
T Consensus 249 ~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 287 (298)
T 3f66_A 249 RRLLQ-----PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 287 (298)
T ss_dssp CCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCC-----CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 22111 0123346888999999999999999999999885
No 180
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=6.5e-39 Score=355.65 Aligned_cols=257 Identities=26% Similarity=0.429 Sum_probs=206.8
Q ss_pred HhhcccccceeecCCceeEEEEEeCC-C-----CeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecC
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELPS-G-----DTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHA 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 759 (964)
..++|+..+.||+|+||.||+|.... + ..||+|.+.... .......+.+|+.+++++ +||||+++++++.+.
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 122 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence 35689999999999999999997642 2 479999987533 334457799999999999 899999999999999
Q ss_pred ceeEEEEEeccCCCHHHHhhhcC------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC
Q 037111 760 RHSFLVYEYLERGSLARILSSET------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF 827 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~ 827 (964)
+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~ 199 (333)
T 2i1m_A 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTN 199 (333)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEG
T ss_pred CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECC
Confidence 99999999999999999997532 34578999999999999999999999 9999999999999999
Q ss_pred CCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCC
Q 037111 828 EYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLP 904 (964)
Q Consensus 828 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~ 904 (964)
++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||||+++|||+| |..||.....
T Consensus 200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~------- 272 (333)
T 2i1m_A 200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV------- 272 (333)
T ss_dssp GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS-------
T ss_pred CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch-------
Confidence 999999999999866443322 223456789999999999999999999999999999998 8889753221
Q ss_pred CCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 905 GANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
................ ....+..+.+++.+||+.||++|||+.+|++.|+
T Consensus 273 ----~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 322 (333)
T 2i1m_A 273 ----NSKFYKLVKDGYQMAQ----PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322 (333)
T ss_dssp ----SHHHHHHHHHTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----hHHHHHHHhcCCCCCC----CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHH
Confidence 1222222222221110 0112356788999999999999999999999885
No 181
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.6e-37 Score=346.60 Aligned_cols=198 Identities=24% Similarity=0.298 Sum_probs=175.8
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-----CCceeeEEeeeecCc
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-----HRNIVKFYGFCSHAR 760 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~~~~~~~~ 760 (964)
..++|++.+.||+|+||+||+|+. .+++.||||++.. .......+..|+.+++.+. ||||+++++++...+
T Consensus 33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~ 109 (360)
T 3llt_A 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN---IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD 109 (360)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT
T ss_pred ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc---chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC
Confidence 356899999999999999999976 4788999999863 2334456778999988886 999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-------------
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF------------- 827 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~------------- 827 (964)
..++||||+ +++|.+++.......+++..+..++.||+.||+|||+. +|+||||||+||+++.
T Consensus 110 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~ 185 (360)
T 3llt_A 110 HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRV 185 (360)
T ss_dssp EEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECT
T ss_pred eeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhcc
Confidence 999999999 88999999887766799999999999999999999999 9999999999999975
Q ss_pred ------------CCceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 828 ------------EYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 828 ------------~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 186 ~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 186 TDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp TTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence 789999999999865433 2345789999999999999999999999999999999999999864
No 182
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.7e-38 Score=355.42 Aligned_cols=262 Identities=21% Similarity=0.307 Sum_probs=209.4
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc--eeEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR--HSFLV 765 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv 765 (964)
++|++.+.||+|+||+||+|+.+ +|+.||||++.... .......+.+|++++++++||||+++++++.... ..++|
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS-FLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG-GGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccc-ccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 57999999999999999999765 58999999987532 2333567889999999999999999999998755 78999
Q ss_pred EEeccCCCHHHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE----CCCCceEEeccCccc
Q 037111 766 YEYLERGSLARILSSET-ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL----DFEYEAHVSDFGTAK 840 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill----~~~~~~kl~Dfg~a~ 840 (964)
|||+++|+|.+++.... ...+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999997643 23489999999999999999999999 99999999999999 778889999999998
Q ss_pred ccCCCCCCcccccccccccccccccc--------CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHH
Q 037111 841 LLKPDSSNWSELAGTYGYVAPELAYT--------MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912 (964)
Q Consensus 841 ~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 912 (964)
...... ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||....... ...+.+
T Consensus 165 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~-------~~~~~~ 236 (396)
T 4eut_A 165 ELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR-------RNKEVM 236 (396)
T ss_dssp ECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTT-------TCHHHH
T ss_pred EccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCccc-------chHHHH
Confidence 765432 2334579999999999865 567889999999999999999999986432211 112333
Q ss_pred HhhhccCCCC-------------------CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 913 DHMFDARLPP-------------------PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 913 ~~~~~~~~~~-------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+..+..+. +............+.+++.+||..||++||+++++++.++
T Consensus 237 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~ 305 (396)
T 4eut_A 237 YKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (396)
T ss_dssp HHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred HHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence 3333222110 0111223567778889999999999999999999988764
No 183
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.6e-37 Score=362.37 Aligned_cols=252 Identities=22% Similarity=0.365 Sum_probs=207.9
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||+||+|+.+ +++.||||++............+.+|+.++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 467999999999999999999765 7899999998654433445678899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC---CCCceEEeccCcccccC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD---FEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~---~~~~~kl~Dfg~a~~~~ 843 (964)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++ .++.+||+|||+++...
T Consensus 101 e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 9999999999986653 489999999999999999999999 999999999999995 45679999999998765
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.. ....+....+.......+
T Consensus 176 ~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~-----------~~~~~~~~~i~~~~~~~~ 242 (486)
T 3mwu_A 176 QNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG-----------KNEYDILKRVETGKYAFD 242 (486)
T ss_dssp CC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHTCCCSC
T ss_pred CCC-ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCC-----------CCHHHHHHHHHhCCCCCC
Confidence 432 2345679999999999876 599999999999999999999999752 223344455544443322
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ......+..+.+++.+||.+||++|||+.++++
T Consensus 243 ~--~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 243 L--PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp S--GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred C--cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1 122334556788999999999999999999986
No 184
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.5e-39 Score=352.70 Aligned_cols=263 Identities=23% Similarity=0.335 Sum_probs=188.0
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhC--CCCCceeeEEeeeecCc----ee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTG--VRHRNIVKFYGFCSHAR----HS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~ 762 (964)
++|++.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++.. ++||||+++++++.... ..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 76 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCcccee
Confidence 57999999999999999999875 899999998532 23566778888777 78999999999998776 78
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEeccCCCCCeEECCCCceEEe
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMH--------HECRPPIVHRDVSSKNVLLDFEYEAHVS 834 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~iiH~dlkp~Nill~~~~~~kl~ 834 (964)
++||||+++|+|.+++... .+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+
T Consensus 77 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~ 150 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEEEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BC
T ss_pred EEEEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEe
Confidence 9999999999999999654 3778889999999999999999 77 99999999999999999999999
Q ss_pred ccCcccccCCCCCC----ccccccccccccccccccC------CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC--
Q 037111 835 DFGTAKLLKPDSSN----WSELAGTYGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS-- 902 (964)
Q Consensus 835 Dfg~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~-- 902 (964)
|||++......... .....||+.|+|||.+.+. .++.++|||||||++|||++|..|+..........
T Consensus 151 DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~ 230 (303)
T 3gxj_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTT
T ss_pred ecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccc
Confidence 99999766544332 1234799999999998776 44568999999999999999944433211110000
Q ss_pred --CCCCChhHHHHhhhccCCCCCc-cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 903 --LPGANMNEAIDHMFDARLPPPW-LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 903 --~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.......+...........+.. ......+++..+.+++.+||+.||++|||+++|++.|+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 294 (303)
T 3gxj_A 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp TCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC
T ss_pred cCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence 0001111222222222222211 112234677789999999999999999999999999863
No 185
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-37 Score=339.47 Aligned_cols=253 Identities=24% Similarity=0.379 Sum_probs=201.2
Q ss_pred cccccceeecCCceeEEEEEeC-CCC---eEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee-EE
Q 037111 690 NFDESFCIGRGGYGSVYKAELP-SGD---TVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS-FL 764 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~-~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~l 764 (964)
.|+..+.||+|+||+||+|++. +++ .||+|++... ......+.+.+|+.++++++||||+++++++.+.+.. ++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc-ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 4667789999999999999753 222 6999998753 3344567889999999999999999999999876654 99
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+.+|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 101 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 176 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILD 176 (298)
T ss_dssp EECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred EEecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence 99999999999999653 34588999999999999999999999 999999999999999999999999999976543
Q ss_pred CC----CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 845 DS----SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 845 ~~----~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
.. .......+++.|+|||.+.+..++.++||||||+++|+|++|+.|+.. .....+....+.....
T Consensus 177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~----------~~~~~~~~~~~~~~~~ 246 (298)
T 3pls_A 177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYR----------HIDPFDLTHFLAQGRR 246 (298)
T ss_dssp GGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTT----------TSCGGGHHHHHHTTCC
T ss_pred CcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCc----------cCCHHHHHHHhhcCCC
Confidence 22 222345678899999999999999999999999999999997666431 1112222222222221
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+. ....+..+.+++.+||+.||++|||++++++.|+
T Consensus 247 ~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~ 283 (298)
T 3pls_A 247 LPQ-----PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVE 283 (298)
T ss_dssp CCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC-----CccchHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111 1123356888999999999999999999999885
No 186
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=4.6e-38 Score=341.31 Aligned_cols=247 Identities=23% Similarity=0.408 Sum_probs=199.6
Q ss_pred hcccccceeecCCceeEEEEEeCC-C-------CeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPS-G-------DTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR 760 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (964)
++|+..+.||+|+||+||+|+... + ..||+|++... .....+.+.+|+.++++++||||+++++++.+++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 579999999999999999996542 3 46999998643 3344578999999999999999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc--------eE
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE--------AH 832 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~--------~k 832 (964)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +|
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~k 161 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIK 161 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred CCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceee
Confidence 9999999999999999997643 3388999999999999999999999 9999999999999998887 99
Q ss_pred EeccCcccccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHH
Q 037111 833 VSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEA 911 (964)
Q Consensus 833 l~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 911 (964)
|+|||.+...... ....+++.|+|||.+.+ ..++.++||||||+++|||++|..|+.. .......
T Consensus 162 l~Dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~----------~~~~~~~ 227 (289)
T 4fvq_A 162 LSDPGISITVLPK----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS----------ALDSQRK 227 (289)
T ss_dssp ECCCCSCTTTSCH----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTT----------TSCHHHH
T ss_pred eccCcccccccCc----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcc----------ccchHHH
Confidence 9999998654322 23457889999999987 6799999999999999999996655321 1111122
Q ss_pred HHhhhc-cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 912 IDHMFD-ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 912 ~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
...... ...+.. ...++.+++.+||+.||++|||++++++.|+.
T Consensus 228 ~~~~~~~~~~~~~--------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 272 (289)
T 4fvq_A 228 LQFYEDRHQLPAP--------KAAELANLINNCMDYEPDHRPSFRAIIRDLNS 272 (289)
T ss_dssp HHHHHTTCCCCCC--------SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHT
T ss_pred HHHhhccCCCCCC--------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 221111 122221 12347788999999999999999999999864
No 187
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.5e-37 Score=346.38 Aligned_cols=262 Identities=22% Similarity=0.355 Sum_probs=211.0
Q ss_pred ccHHHHHHHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCc------hhhHHHHHHHHHHHhCC-CCCcee
Q 037111 679 LVYEEIIRSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE------TTHQKEFLSEIKALTGV-RHRNIV 750 (964)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l-~h~niv 750 (964)
..+.......++|++.+.||+|+||.||+|+.+ +|+.||||++...... ....+.+.+|+.+++++ +||||+
T Consensus 84 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv 163 (365)
T 2y7j_A 84 PDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHII 163 (365)
T ss_dssp CHHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBC
T ss_pred ccchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEe
Confidence 334444555678999999999999999999875 7999999998643211 12245678899999998 799999
Q ss_pred eEEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc
Q 037111 751 KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE 830 (964)
Q Consensus 751 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~ 830 (964)
++++++......++||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 164 ~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 164 TLIDSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp CEEEEEEBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEEEEEeeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCC
Confidence 9999999999999999999999999999754 3489999999999999999999999 9999999999999999999
Q ss_pred eEEeccCcccccCCCCCCcccccccccccccccccc------CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCC
Q 037111 831 AHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT------MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLP 904 (964)
Q Consensus 831 ~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~ 904 (964)
+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 239 ikl~DfG~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~--------- 308 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR--------- 308 (365)
T ss_dssp EEECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS---------
T ss_pred EEEEecCcccccCCCc-ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC---------
Confidence 9999999998765443 2345679999999999863 35889999999999999999999998532
Q ss_pred CCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 905 GANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........+.......+. .........+.+++.+||+.||++|||+.++++
T Consensus 309 --~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 309 --RQILMLRMIMEGQYQFSS--PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp --SHHHHHHHHHHTCCCCCH--HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --CHHHHHHHHHhCCCCCCC--cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 122333333333333221 111223456888999999999999999999986
No 188
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.5e-38 Score=348.11 Aligned_cols=261 Identities=23% Similarity=0.363 Sum_probs=205.5
Q ss_pred ccccceeecCCceeEEEEEeC-----CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC--ceeE
Q 037111 691 FDESFCIGRGGYGSVYKAELP-----SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA--RHSF 763 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 763 (964)
|+..+.||+|+||+||++.++ +++.||||++... ........+.+|+.++++++||||+++++++.+. ...+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 489999999999999998653 6788999999753 3344567799999999999999999999999874 6789
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++.... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 112 lv~e~~~~~~L~~~l~~~~---~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EEECCCTTCBHHHHGGGSC---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEEecccCCcHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 9999999999999996543 89999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC--CCC-CCChhHHHHhhhc
Q 037111 844 PDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS--SLP-GANMNEAIDHMFD 917 (964)
Q Consensus 844 ~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~--~~~-~~~~~~~~~~~~~ 917 (964)
..... .....+++.|+|||.+.+..++.++||||+|+++|||++|+.||......... ... .............
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHh
Confidence 54321 23445788899999999989999999999999999999999998643221000 000 0001111222222
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.....+. ...++..+.+++.+||+.||++|||++++++.|+
T Consensus 266 ~~~~~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 306 (318)
T 3lxp_A 266 RGERLPR----PDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306 (318)
T ss_dssp TTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cccCCCC----CccccHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 2222111 1234466889999999999999999999999886
No 189
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.4e-37 Score=342.21 Aligned_cols=262 Identities=19% Similarity=0.286 Sum_probs=200.0
Q ss_pred hccccc-ceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEE
Q 037111 689 NNFDES-FCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 689 ~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 765 (964)
+.|++. +.||+|+||.||+|... +++.||||++.... ......+.+|+.++.++ +||||+++++++.+++..++|
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv 89 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV 89 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 467774 78999999999999754 78999999987532 33456788999999884 799999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc---eEEeccCccccc
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE---AHVSDFGTAKLL 842 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~---~kl~Dfg~a~~~ 842 (964)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||++...
T Consensus 90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 90 FEKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp EECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred EEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 99999999999997653 488999999999999999999999 9999999999999998776 999999999765
Q ss_pred CCCCC-------Ccccccccccccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCC---
Q 037111 843 KPDSS-------NWSELAGTYGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGAN--- 907 (964)
Q Consensus 843 ~~~~~-------~~~~~~g~~~y~aPE~~~~-----~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~--- 907 (964)
..... ......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||.........+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 244 (316)
T 2ac3_A 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244 (316)
T ss_dssp -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence 43211 1223468999999999875 55889999999999999999999999754432211111111
Q ss_pred -hhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 908 -MNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 908 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+.......+. .........+.+++.+||+.||++|||++|+++
T Consensus 245 ~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 245 CQNMLFESIQEGKYEFPD--KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHCCCCCCH--HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHhccCcccCc--hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 11233333333333221 111223456888999999999999999999986
No 190
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.2e-37 Score=337.81 Aligned_cols=247 Identities=20% Similarity=0.324 Sum_probs=201.9
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 764 (964)
..++|++.+.||+|+||.||+|... +++.||||++............+.+|+..+..+ +||||+++++++.+++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3467999999999999999999765 799999999986555555667888999999888 89999999999999999999
Q ss_pred EEEeccCCCHHHHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC--------------
Q 037111 765 VYEYLERGSLARILSSET--ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE-------------- 828 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~-------------- 828 (964)
||||+++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 999999999999997642 24589999999999999999999999 99999999999999844
Q ss_pred -----CceEEeccCcccccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC
Q 037111 829 -----YEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS 902 (964)
Q Consensus 829 -----~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~ 902 (964)
..+||+|||.+....... ...|++.|+|||.+.+. .++.++||||||+++|+|++|..|+...
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------- 234 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG------- 234 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS-------
T ss_pred ccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch-------
Confidence 479999999998765433 23589999999999866 5668999999999999999998775311
Q ss_pred CCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 903 LPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+.....+.. .......+.+++.+||+.||++|||+.++++
T Consensus 235 -------~~~~~~~~~~~~~~-----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 235 -------DQWHEIRQGRLPRI-----PQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp -------HHHHHHHTTCCCCC-----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -------hHHHHHHcCCCCCC-----CcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 11222222222211 1123355788899999999999999999975
No 191
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=352.13 Aligned_cols=262 Identities=20% Similarity=0.250 Sum_probs=198.2
Q ss_pred hcccccceeecCCceeEEEEEeC----CCCeEEEEEeccccCchh---------hHHHHHHHHHHHhCCCCCceeeEEee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP----SGDTVAVKKLHSFTGETT---------HQKEFLSEIKALTGVRHRNIVKFYGF 755 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~~~ 755 (964)
++|++.+.||+|+||.||+|... ++..||||++........ ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57999999999999999999775 578899999875322111 12346778899999999999999999
Q ss_pred eec----CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC--
Q 037111 756 CSH----ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-- 829 (964)
Q Consensus 756 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~-- 829 (964)
+.. ....++||||+ +++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTT
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCC
Confidence 987 67899999999 899999997654 589999999999999999999999 999999999999999887
Q ss_pred ceEEeccCcccccCCCCC-------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC
Q 037111 830 EAHVSDFGTAKLLKPDSS-------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS 902 (964)
Q Consensus 830 ~~kl~Dfg~a~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~ 902 (964)
.+||+|||+++....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.....
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~----- 265 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK----- 265 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT-----
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc-----
Confidence 999999999986643221 12345789999999999999999999999999999999999999853211
Q ss_pred CCCCChhHHHHhhhccCCCCCcccc-chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 903 LPGANMNEAIDHMFDARLPPPWLEV-GVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
................+...... .....+.++.+++.+||+.||++||++++|++.|+.
T Consensus 266 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 325 (345)
T 2v62_A 266 --DPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNP 325 (345)
T ss_dssp --CHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCT
T ss_pred --ccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 00001111111112222110000 001334568899999999999999999999999974
No 192
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-37 Score=337.55 Aligned_cols=252 Identities=26% Similarity=0.357 Sum_probs=204.9
Q ss_pred hcccccc-eeecCCceeEEEEEeC---CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEE
Q 037111 689 NNFDESF-CIGRGGYGSVYKAELP---SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 689 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 764 (964)
++|.+.. .||+|+||.||+|.+. ++..||||+++.. ......+.+.+|+.++++++||||+++++++ ..+..++
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc-cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 4566666 8999999999999753 5778999998753 2344567899999999999999999999999 4567899
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 87 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~ 162 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGA 162 (287)
T ss_dssp EEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred EEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence 99999999999999643 34589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 845 DSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 845 ~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
.... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+....+.....
T Consensus 163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----------~~~~~~~i~~~~~ 231 (287)
T 1u59_A 163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-----------GPEVMAFIEQGKR 231 (287)
T ss_dssp CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-----------THHHHHHHHTTCC
T ss_pred CcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-----------HHHHHHHHhcCCc
Confidence 4322 223356889999999998889999999999999999998 999985322 1233333322221
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
++. ....+..+.+++.+||+.||++||++.++++.|+
T Consensus 232 ~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 232 MEC-----PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp CCC-----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCC-----CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111 1234456888999999999999999999999885
No 193
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.4e-37 Score=333.19 Aligned_cols=253 Identities=25% Similarity=0.350 Sum_probs=204.8
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
..++|++.+.||+|+||.||+|+.+ +++.||||++..... ......+.+|+.+++.++||||+++++++.+++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 3568999999999999999999765 789999999864332 33457789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++|+|.+++... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 84 LEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp EECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred EEecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 9999999999999643 3489999999999999999999999 9999999999999999999999999999765432
Q ss_pred C--CCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 846 S--SNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 846 ~--~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
. .......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||...... ..............
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----------~~~~~~~~~~~~~~ 228 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS----------CQEYSDWKEKKTYL 228 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT----------SHHHHHHHTTCTTS
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH----------HHHHHHhhhccccc
Confidence 2 22345578999999999987775 77899999999999999999998643221 01111111111111
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+ ........+.+++.+||+.||++|||++|+++
T Consensus 229 ~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 N----PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp T----TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred C----chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 1 11223456778899999999999999999875
No 194
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=6.3e-38 Score=346.62 Aligned_cols=264 Identities=25% Similarity=0.331 Sum_probs=207.7
Q ss_pred hcccccceeecCCceeEEEEEe-----CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeee--cCce
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-----PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCS--HARH 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~ 761 (964)
++|+..+.||+|+||.||+|++ .+++.||||++... .....+.+.+|+.++++++||||+++++++. +...
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 5799999999999999999984 46788999998743 3444567899999999999999999999886 4567
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 176 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKL 176 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred EEEEEeecCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccccee
Confidence 8999999999999999976432 489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC---CCCCCChhHHHHhh
Q 037111 842 LKPDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS---SLPGANMNEAIDHM 915 (964)
Q Consensus 842 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~ 915 (964)
....... .....+++.|+|||.+.+..++.++||||||+++|+|++|+.||......... ..............
T Consensus 177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256 (327)
T ss_dssp CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 6544321 23345788899999999988999999999999999999999998643321100 00011111111222
Q ss_pred hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 916 FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.......+. ...++..+.+++.+||+.||++|||++++++.|+
T Consensus 257 ~~~~~~~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 299 (327)
T 3lxl_A 257 LEEGQRLPA----PPACPAEVHELMKLCWAPSPQDRPSFSALGPQLD 299 (327)
T ss_dssp HHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hhcccCCCC----CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 222221111 1234456888999999999999999999999885
No 195
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.4e-38 Score=355.04 Aligned_cols=202 Identities=26% Similarity=0.438 Sum_probs=165.2
Q ss_pred HHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCc--e
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHAR--H 761 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~ 761 (964)
...++|+..+.||+|+||.||+|.. .+|+.||||++............+.+|+.+++.+. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 3467899999999999999999965 47899999999765555566678889999999997 999999999997543 7
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.|+||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+.
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 899999998 5999999653 488999999999999999999999 999999999999999999999999999986
Q ss_pred cCCC---------------------CCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 842 LKPD---------------------SSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 842 ~~~~---------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
.... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 233 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence 5321 111234579999999999886 6789999999999999999999999853
No 196
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.7e-37 Score=339.20 Aligned_cols=248 Identities=25% Similarity=0.421 Sum_probs=206.9
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
+.|+..+.||+|+||.||+|.. .+++.||||++..... ......+.+|+.++++++||||+++++++.+....++|||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 4689999999999999999965 4688999999875432 3345789999999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCC
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSS 847 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 847 (964)
|+++++|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+........
T Consensus 101 ~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 174 (303)
T 3a7i_A 101 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 174 (303)
T ss_dssp CCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC
T ss_pred eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcccc
Confidence 9999999999954 3589999999999999999999999 999999999999999999999999999987765544
Q ss_pred CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 848 NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 848 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... ..+....+.....+ ..
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----------~~~~~~~~~~~~~~-~~--- 239 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH-----------PMKVLFLIPKNNPP-TL--- 239 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----------HHHHHHHHHHSCCC-CC---
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC-----------HHHHHHHhhcCCCC-CC---
Confidence 4456678999999999999999999999999999999999999975322 12222222222111 11
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+.+++.+||+.||++|||+.++++
T Consensus 240 -~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 240 -EGNYSKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp -CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred -ccccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1123345788899999999999999999975
No 197
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-37 Score=359.31 Aligned_cols=197 Identities=24% Similarity=0.363 Sum_probs=158.3
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec-----Ccee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH-----ARHS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~~ 762 (964)
++|++.+.||+|+||+||+|+.+ +++.||||++..........+.+.+|+.+++.++||||+++++++.. ....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57999999999999999999654 78999999997655555666789999999999999999999999943 3578
Q ss_pred EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 763 FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
|+||||+. |+|.+++... ..+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+..
T Consensus 133 ~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEECCCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEeccc-cchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 99999985 6999999643 4589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC---------------------------Ccccccccccccccccc-ccCCCCcchhHHHHHHHHHHHHhCCCC
Q 037111 843 KPDSS---------------------------NWSELAGTYGYVAPELA-YTMKVTEKCDVYSFGVLALEVIKGQHP 891 (964)
Q Consensus 843 ~~~~~---------------------------~~~~~~g~~~y~aPE~~-~~~~~~~~sDvwSlGvll~el~tg~~p 891 (964)
..... .....+||+.|+|||++ .+..++.++|||||||++|||++|..|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~ 283 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKE 283 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccc
Confidence 43211 12345789999999976 466799999999999999999995443
No 198
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.2e-37 Score=361.64 Aligned_cols=252 Identities=24% Similarity=0.370 Sum_probs=203.1
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||+||+|+.+ ++..||+|++............+.+|+.+++.++||||+++++++.+....|+||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999765 7889999999765444444577899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC---CceEEeccCcccccC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE---YEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~a~~~~ 843 (964)
||+++|+|.+++.... .+++..+..++.||++||+|||++ +|+||||||+||+++.. +.+||+|||++....
T Consensus 116 e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred ecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 9999999999986653 488999999999999999999999 99999999999999764 459999999998765
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||.. ....+....+.......+
T Consensus 191 ~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~-----------~~~~~~~~~i~~~~~~~~ 257 (494)
T 3lij_A 191 NQK-KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGG-----------QTDQEILRKVEKGKYTFD 257 (494)
T ss_dssp TTB-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHTCCCCC
T ss_pred CCc-cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCC-----------CCHHHHHHHHHhCCCCCC
Confidence 432 234567999999999876 5699999999999999999999999753 223344555544443322
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ......+..+.+++.+||..||++|||+.++++
T Consensus 258 ~--~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 258 S--PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp S--GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred c--hhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 1 112234456788899999999999999999874
No 199
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=4.1e-38 Score=339.62 Aligned_cols=248 Identities=26% Similarity=0.411 Sum_probs=197.5
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC-ceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA-RHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+.. |+.||||++... ...+.+.+|+.++++++||||+++++++.+. +..++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 468999999999999999999875 889999998642 2346789999999999999999999997554 5789999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.......+++..+..++.|+++|++|||++ +++||||||+||+++.++.+||+|||++.......
T Consensus 95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 171 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171 (278)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence 999999999999765544578899999999999999999999 99999999999999999999999999997654332
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+....+........
T Consensus 172 ---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~-----------~~~~~~~~~~~~~~~~-- 235 (278)
T 1byg_A 172 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----------LKDVVPRVEKGYKMDA-- 235 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC-----------GGGHHHHHTTTCCCCC--
T ss_pred ---cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC-----------HHHHHHHHhcCCCCCC--
Confidence 23357889999999999999999999999999999998 999975322 1222233222211111
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+..+.+++.+||+.||++||++.++++.|+
T Consensus 236 ---~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 269 (278)
T 1byg_A 236 ---PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269 (278)
T ss_dssp ---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHH
Confidence 1223456888999999999999999999999885
No 200
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.1e-37 Score=336.81 Aligned_cols=253 Identities=21% Similarity=0.329 Sum_probs=201.2
Q ss_pred hhcccccceeecCCceeEEEEEeCC----CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPS----GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
.++|+..+.||+|+||.||+|.... +..||+|++.... .....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 4679999999999999999997542 2359999987532 34456789999999999999999999999875 4568
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++.... ..+++..+..++.|+++|++|||++ +|+||||||+||+++.++.+||+|||.+....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp EEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred EEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 9999999999999997643 3488999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 844 PDSS-NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 844 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .+....+......
T Consensus 165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~-----------~~~~~~~~~~~~~ 233 (281)
T 3cc6_A 165 DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-----------KDVIGVLEKGDRL 233 (281)
T ss_dssp --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG-----------GGHHHHHHHTCCC
T ss_pred cccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh-----------HHHHHHHhcCCCC
Confidence 4332 2234457889999999998899999999999999999998 9999853221 1222222222111
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+. ....+..+.+++.+||+.||++||++.++++.|+
T Consensus 234 ~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 269 (281)
T 3cc6_A 234 PK-----PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 269 (281)
T ss_dssp CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC-----CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHH
Confidence 11 1123355888999999999999999999999885
No 201
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.7e-38 Score=344.52 Aligned_cols=252 Identities=23% Similarity=0.374 Sum_probs=196.2
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCe----EEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDT----VAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
++|+..+.||+|+||.||+|++. +++. ||+|.+... ........+.+|+.++++++||||+++++++..+. .+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC-SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc-cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 57999999999999999999754 4554 477776542 23445678999999999999999999999998765 78
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+|+||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 9999999999999997643 3489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 844 PDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 844 ~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
..... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .+....+.....
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----------~~~~~~~~~~~~ 237 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----------SEISSILEKGER 237 (327)
T ss_dssp -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----------GGHHHHHHTTCC
T ss_pred CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH-----------HHHHHHHHcCCC
Confidence 43322 223456788999999999999999999999999999999 9999863221 122222222211
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+. .......+.+++.+||+.||++||+++|+++.|+
T Consensus 238 ~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 274 (327)
T 3lzb_A 238 LPQ-----PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CCC-----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC-----CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 111 1123445788999999999999999999999885
No 202
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.1e-37 Score=333.88 Aligned_cols=252 Identities=25% Similarity=0.359 Sum_probs=198.6
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+.+ ++..||+|++.... .......+.+|+.++++++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR-SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG-CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc-cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 357999999999999999999764 68899999987543 2334578899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE---CCCCceEEeccCcccc
Q 037111 767 EYLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL---DFEYEAHVSDFGTAKL 841 (964)
Q Consensus 767 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a~~ 841 (964)
||+++|+|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||++..
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~ 176 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence 999999999998653 235689999999999999999999999 99999999999999 4567899999999976
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
..... ......|++.|+|||.+. +.++.++||||+|+++|||++|+.||... ...+...........
T Consensus 177 ~~~~~-~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~-----------~~~~~~~~~~~~~~~ 243 (285)
T 3is5_A 177 FKSDE-HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT-----------SLEEVQQKATYKEPN 243 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS-----------SHHHHHHHHHHCCCC
T ss_pred cCCcc-cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC-----------CHHHHHhhhccCCcc
Confidence 65432 234557899999999875 56899999999999999999999998532 122222222211111
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.... .......+.+++.+||+.||++|||++|+++
T Consensus 244 ~~~~---~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 244 YAVE---CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CCC-----CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cccc---cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1100 0112345778899999999999999999985
No 203
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.3e-37 Score=336.89 Aligned_cols=245 Identities=23% Similarity=0.400 Sum_probs=204.3
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec-------
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH------- 758 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------- 758 (964)
...+|+..+.||+|+||.||+|+.. +++.||+|++.... ..+.+|+.++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 3467999999999999999999775 79999999986432 246689999999999999999999864
Q ss_pred ---------CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC
Q 037111 759 ---------ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY 829 (964)
Q Consensus 759 ---------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~ 829 (964)
....++||||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCC
Confidence 45689999999999999999876656799999999999999999999999 999999999999999999
Q ss_pred ceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChh
Q 037111 830 EAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN 909 (964)
Q Consensus 830 ~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~ 909 (964)
.+||+|||++........ .....|++.|+|||.+.+..++.++||||||+++|||++|..|+... .
T Consensus 160 ~~kl~Dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------------~ 225 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDGK-RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-------------S 225 (284)
T ss_dssp EEEECCCTTCEESSCCSC-CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-------------H
T ss_pred CEEECcchhheecccccc-ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-------------H
Confidence 999999999987654432 23456899999999999999999999999999999999999886321 1
Q ss_pred HHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 910 EAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..........++.. ....+.+++.+||+.||++||++.|+++.|+
T Consensus 226 ~~~~~~~~~~~~~~--------~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~ 270 (284)
T 2a19_B 226 KFFTDLRDGIISDI--------FDKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270 (284)
T ss_dssp HHHHHHHTTCCCTT--------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhhccccccc--------CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 22222222222221 2244778889999999999999999999874
No 204
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.7e-37 Score=373.39 Aligned_cols=250 Identities=21% Similarity=0.323 Sum_probs=210.9
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 763 (964)
..++|++.+.||+|+||.||+|+.+ +++.||||+++... ........+..|..++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4678999999999999999999765 68889999987431 1223346678899999887 6999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||++||+|.+++.... .+++..++.++.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+...
T Consensus 419 lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 9999999999999997654 489999999999999999999999 99999999999999999999999999998755
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||.. ....+....+.......+
T Consensus 494 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~-----------~~~~~~~~~i~~~~~~~p 562 (674)
T 3pfq_A 494 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG-----------EDEDELFQSIMEHNVAYP 562 (674)
T ss_dssp CTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHSSCCCCC
T ss_pred cCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC-----------CCHHHHHHHHHhCCCCCC
Confidence 555555667899999999999999999999999999999999999999752 233455666665544432
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCH-----HHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNM-----QIVC 958 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~-----~evl 958 (964)
.....++.+++.+||..||++||++ +||+
T Consensus 563 ------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~ 596 (674)
T 3pfq_A 563 ------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK 596 (674)
T ss_dssp ------TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHH
T ss_pred ------ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHh
Confidence 1234567888899999999999997 6665
No 205
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=346.02 Aligned_cols=264 Identities=27% Similarity=0.401 Sum_probs=196.4
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHH--HHhCCCCCceeeEEeeeec-----Cc
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIK--ALTGVRHRNIVKFYGFCSH-----AR 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~--~l~~l~h~niv~l~~~~~~-----~~ 760 (964)
.++|++.+.||+|+||.||+|+. +++.||||++... ....+..|.+ .+..++||||+++++++.. ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA-----NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc-----chhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 56899999999999999999987 5899999998632 1233444444 4556899999999985532 34
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC------CCCeEeccCCCCCeEECCCCceEEe
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC------RPPIVHRDVSSKNVLLDFEYEAHVS 834 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------~~~iiH~dlkp~Nill~~~~~~kl~ 834 (964)
..++||||+++|+|.+++.... .++..+..++.||++||+|||+.. +++|+||||||+||+++.++.+||+
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred eEEEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 6789999999999999996544 588899999999999999999873 3389999999999999999999999
Q ss_pred ccCcccccCCCC--------CCcccccccccccccccccc-------CCCCcchhHHHHHHHHHHHHhCCCCCCcccccc
Q 037111 835 DFGTAKLLKPDS--------SNWSELAGTYGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS 899 (964)
Q Consensus 835 Dfg~a~~~~~~~--------~~~~~~~g~~~y~aPE~~~~-------~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~ 899 (964)
|||+++...... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 999998765322 11224569999999999886 456779999999999999999988764433221
Q ss_pred CCCCC------CCChhHHHHhh-hc----cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 900 DSSLP------GANMNEAIDHM-FD----ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 900 ~~~~~------~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..... .....+..... .. ..++.. ..........+.+++.+||+.||++|||++|+++.|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~ 314 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEA--WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTT--CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcc--cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHH
Confidence 11110 00001111111 11 112211 1223456678999999999999999999999999885
No 206
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-37 Score=346.83 Aligned_cols=250 Identities=20% Similarity=0.318 Sum_probs=196.0
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc------e
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR------H 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 761 (964)
++|+..+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+.+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 5799999999999999999976 47999999998654445555678899999999999999999999997653 4
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.|+||||+ +++|.+++.. ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 105 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 69999999 7899999975 3488999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc---
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD--- 917 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 917 (964)
.... .....+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||..... .+.+..+..
T Consensus 178 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----------~~~l~~i~~~~g 243 (367)
T 1cm8_A 178 ADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH-----------LDQLKEIMKVTG 243 (367)
T ss_dssp CCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHHHHC
T ss_pred cccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHHhcC
Confidence 5432 334578999999999887 6799999999999999999999999863321 111111110
Q ss_pred ----------------------cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ----------------------ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ----------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+..............+.+++.+||..||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 244 TPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp CCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 011111111112233456788999999999999999999986
No 207
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.9e-37 Score=357.63 Aligned_cols=261 Identities=20% Similarity=0.279 Sum_probs=196.1
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC------c
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA------R 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 760 (964)
.++|+..+.||+|+||+||+|.. .+++.||||++..........+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46799999999999999999965 4688999999976544555667889999999999999999999999654 4
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
..|+||||+++ ++.+.+.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred eEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 67999999986 57776632 388999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccC---------C----CCCCCC
Q 037111 841 LLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD---------S----SLPGAN 907 (964)
Q Consensus 841 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~---------~----~~~~~~ 907 (964)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||........ . .....
T Consensus 213 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~- 290 (464)
T 3ttj_A 213 TAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 290 (464)
T ss_dssp ----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS-
T ss_pred ecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc-
Confidence 76543 223456899999999999999999999999999999999999999864321000 0 00000
Q ss_pred hhHHHHhhhccCC--CC------------CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 908 MNEAIDHMFDARL--PP------------PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 908 ~~~~~~~~~~~~~--~~------------~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
............ .. +...........++.+++.+||..||++|||++|+++
T Consensus 291 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 291 -QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp -CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000011110000 00 0000111223567889999999999999999999875
No 208
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.6e-37 Score=338.02 Aligned_cols=250 Identities=22% Similarity=0.311 Sum_probs=204.0
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM 85 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc--ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence 467999999999999999999765 78999999987432 223456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE---CCCCceEEeccCcccccC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL---DFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a~~~~ 843 (964)
||+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||.+....
T Consensus 86 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 86 QLVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp CCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred EcCCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 9999999999996543 488999999999999999999999 99999999999999 788999999999997544
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCC
Q 037111 844 PDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPP 923 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (964)
.. ......|++.|+|||.+.+..++.++||||+|+++|||++|+.||... ...+....+.......+
T Consensus 161 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----------~~~~~~~~i~~~~~~~~ 227 (304)
T 2jam_A 161 NG--IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE-----------TESKLFEKIKEGYYEFE 227 (304)
T ss_dssp CB--TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS-----------CHHHHHHHHHHCCCCCC
T ss_pred CC--ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCC-----------CHHHHHHHHHcCCCCCC
Confidence 32 223456899999999999999999999999999999999999997532 22233444433332211
Q ss_pred ccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 924 WLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 924 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ......+..+.+++.+||+.||++||+++++++
T Consensus 228 ~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 228 S--PFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp T--TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred c--cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 111233456888999999999999999999975
No 209
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=371.16 Aligned_cols=250 Identities=25% Similarity=0.351 Sum_probs=199.4
Q ss_pred ccccc-eeecCCceeEEEEEeC---CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 691 FDESF-CIGRGGYGSVYKAELP---SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 691 ~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
+.+.. .||+|+||.||+|.++ ++..||||+++.. ......+++.+|+.++++++|||||++++++.. +..++||
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCC-CSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCC-CChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 33334 7999999999999764 4567999999753 233456789999999999999999999999976 5689999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 415 E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~ 490 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490 (613)
T ss_dssp ECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---
T ss_pred EeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCC
Confidence 999999999999654 34589999999999999999999999 99999999999999999999999999998765433
Q ss_pred CCc---cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 847 SNW---SELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 847 ~~~---~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
... ....+++.|+|||++.+..++.++|||||||++|||++ |+.||.... ..+....+......+
T Consensus 491 ~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~-----------~~~~~~~i~~~~~~~ 559 (613)
T 2ozo_A 491 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-----------GPEVMAFIEQGKRME 559 (613)
T ss_dssp -----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----------SHHHHHHHHTTCCCC
T ss_pred ceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC-----------HHHHHHHHHcCCCCC
Confidence 221 22345689999999999999999999999999999998 999975322 223333333322111
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
. ...++..+.+++.+||+.||++||++++|++.|+
T Consensus 560 ~-----p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 594 (613)
T 2ozo_A 560 C-----PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 594 (613)
T ss_dssp C-----CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHH
T ss_pred C-----CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1 1234567889999999999999999999999885
No 210
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=7.7e-37 Score=331.80 Aligned_cols=248 Identities=24% Similarity=0.370 Sum_probs=201.9
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec----CceeEE
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH----ARHSFL 764 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 764 (964)
.|+..+.||+|+||.||+|.. .++..||+|++..........+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 478888999999999999966 467889999998665556667789999999999999999999999865 456899
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCeEEC-CCCceEEeccCcccc
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPP--IVHRDVSSKNVLLD-FEYEAHVSDFGTAKL 841 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--iiH~dlkp~Nill~-~~~~~kl~Dfg~a~~ 841 (964)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||++..
T Consensus 107 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 999999999999997643 488999999999999999999998 7 99999999999998 789999999999975
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.... ......|++.|+|||.+. +.++.++||||+|+++|+|++|+.||.... ........+.....+
T Consensus 182 ~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~----------~~~~~~~~~~~~~~~ 248 (290)
T 1t4h_A 182 KRAS--FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQ----------NAAQIYRRVTSGVKP 248 (290)
T ss_dssp CCTT--SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS----------SHHHHHHHHTTTCCC
T ss_pred cccc--ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcC----------cHHHHHHHHhccCCc
Confidence 4433 233557899999999876 459999999999999999999999985321 122333333332222
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
... .......+.+++.+||+.||++|||++++++
T Consensus 249 ~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 249 ASF----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGG----GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccc----CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 211 1122345788999999999999999999986
No 211
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.5e-37 Score=334.61 Aligned_cols=248 Identities=25% Similarity=0.413 Sum_probs=205.5
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|++.+.||+|+||.||+|+.. +++.||||++..... .......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 468999999999999999999765 577899999864321 222346788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++|+|.+++.... .+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp ECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 99999999999997654 488999999999999999999999 9999999999999999999999999998765432
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... ..+....+.......+
T Consensus 168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----------~~~~~~~~~~~~~~~~-- 232 (284)
T 2vgo_A 168 --RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS-----------HTETHRRIVNVDLKFP-- 232 (284)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-----------HHHHHHHHHTTCCCCC--
T ss_pred --ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC-----------HhHHHHHHhccccCCC--
Confidence 2234578999999999999999999999999999999999999985322 2233333333322211
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+.+++.+||+.||++||+++++++
T Consensus 233 ----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 233 ----PFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 122345778899999999999999999975
No 212
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.2e-37 Score=349.30 Aligned_cols=261 Identities=23% Similarity=0.316 Sum_probs=205.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+.. +++.||+|++... ........+.+|+.++++++||||+++++++.+++..++||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc-cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 357999999999999999999765 7889999998753 23445578899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... .+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||++.......
T Consensus 111 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 186 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 186 (360)
T ss_dssp CCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC
T ss_pred ECCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccccc
Confidence 9999999999997654 4889999999999999999999831 79999999999999999999999999987543221
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccC--------------------------
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD-------------------------- 900 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~-------------------------- 900 (964)
.....||+.|+|||.+.+..++.++||||||+++|||++|+.||........
T Consensus 187 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (360)
T 3eqc_A 187 --ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 264 (360)
T ss_dssp ------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------
T ss_pred --ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcc
Confidence 2345789999999999999999999999999999999999999864322100
Q ss_pred -----CCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 901 -----SSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 901 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+.....+..+.+.....+... .......+.+++.+||+.||++|||++|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 265 NKFGMDSRPPMAIFELLDYIVNEPPPKLP----SGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ---------CCCHHHHHHHHHHSCCCCCC----TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccCCCCcccchhhhhHHhccCCCCCC----cccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000111111222333222222110 1123446888999999999999999999975
No 213
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-37 Score=346.02 Aligned_cols=258 Identities=22% Similarity=0.298 Sum_probs=198.3
Q ss_pred HHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCc---hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE---TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
...++|+..+.||+|+||.||+|+.. +|+.||||++...... ....+.+.+|+.++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999775 6899999998643211 1112467899999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+++ +|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred eEEEEEcCCC-CHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 9999999986 8999886543 3588889999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc--
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-- 918 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 918 (964)
............||+.|+|||.+.+. .++.++||||+||++|||++|..||..... .+....++..
T Consensus 162 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-----------~~~~~~i~~~~~ 230 (346)
T 1ua2_A 162 FGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-----------LDQLTRIFETLG 230 (346)
T ss_dssp TTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHHHHC
T ss_pred ccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-----------HHHHHHHHHHcC
Confidence 76555555566789999999998764 488999999999999999999999753221 1222221110
Q ss_pred -C-------------------CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 919 -R-------------------LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 919 -~-------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. .+.............++.+++.+||..||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 231 TPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp CCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 0000000011223456888999999999999999999986
No 214
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.2e-37 Score=344.32 Aligned_cols=255 Identities=25% Similarity=0.402 Sum_probs=203.5
Q ss_pred hhcccccceeecCCceeEEEEEe------CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 761 (964)
.++|+..+.||+|+||.||+|+. .+++.||||++... ........+.+|+.++++++||||+++++++.+...
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 46799999999999999999974 35778999998643 234455688999999999999999999999999999
Q ss_pred eEEEEEeccCCCHHHHhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC---CCceEE
Q 037111 762 SFLVYEYLERGSLARILSSETA-----TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF---EYEAHV 833 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~---~~~~kl 833 (964)
.++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999976432 3488999999999999999999999 9999999999999984 446999
Q ss_pred eccCcccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhH
Q 037111 834 SDFGTAKLLKPDSS--NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNE 910 (964)
Q Consensus 834 ~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 910 (964)
+|||++........ ......+++.|+|||.+.+..++.++||||||+++|||+| |+.||... ...+
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~-----------~~~~ 253 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK-----------SNQE 253 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC-----------CHHH
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCc-----------CHHH
Confidence 99999975543321 2234567889999999999999999999999999999998 88897522 2233
Q ss_pred HHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 911 AIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....+.....+.. ....+..+.+++.+||+.||++||++.++++.|+
T Consensus 254 ~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 254 VLEFVTSGGRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp HHHHHHTTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhcCCCCCC-----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 3333333322211 1123456888999999999999999999999874
No 215
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4.3e-37 Score=334.80 Aligned_cols=251 Identities=24% Similarity=0.359 Sum_probs=197.8
Q ss_pred cccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
+|.....||+|+||.||+|.. .+++.||||++... .......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER--DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC--CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC--chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 455566899999999999975 46889999998753 233456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-CCceEEeccCcccccCCCC
Q 037111 769 LERGSLARILSSET-ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF-EYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 769 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~ 846 (964)
+++++|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||.+.......
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 99999999997642 33567889999999999999999999 9999999999999988 8999999999998765544
Q ss_pred CCccccccccccccccccccCC--CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 847 SNWSELAGTYGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~--~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
.......|++.|+|||.+.+.. ++.++||||||+++|+|++|+.||..... ..............+..
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----------~~~~~~~~~~~~~~~~~ 247 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE----------PQAAMFKVGMFKVHPEI 247 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS----------HHHHHHHHHHHCCCCCC
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc----------hhHHHHhhccccccccc
Confidence 3344567899999999987654 88999999999999999999999853221 11111111111111111
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+.+++.+||+.||++||++.++++
T Consensus 248 ----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 248 ----PESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ----CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ----cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1123456788899999999999999999975
No 216
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.4e-37 Score=371.69 Aligned_cols=246 Identities=27% Similarity=0.375 Sum_probs=199.4
Q ss_pred ceeecCCceeEEEEEeC---CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGSVYKAELP---SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.||+|+||.||+|.+. .++.||||+++.........+++.+|+.++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999553 46789999998655555567889999999999999999999999965 558899999999
Q ss_pred CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCC---
Q 037111 772 GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSN--- 848 (964)
Q Consensus 772 gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--- 848 (964)
|+|.+++... ..+++..+..++.||+.||+|||++ +||||||||+||+++.++.+||+|||+++........
T Consensus 454 g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 454 GPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 9999999654 3489999999999999999999999 9999999999999999999999999999876544321
Q ss_pred ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcccc
Q 037111 849 WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEV 927 (964)
Q Consensus 849 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 927 (964)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||.. ....+....+......+.
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~-----------~~~~~~~~~i~~~~~~~~---- 593 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG-----------MKGSEVTAMLEKGERMGC---- 593 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT-----------CCHHHHHHHHHTTCCCCC----
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-----------CCHHHHHHHHHcCCCCCC----
Confidence 223346788999999999999999999999999999998 9999753 222333333333222211
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 928 GVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 928 ~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...++.++.+++.+||+.||++||++++|++.|+
T Consensus 594 -p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 594 -PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp -CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 1234567889999999999999999999999886
No 217
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.8e-37 Score=342.87 Aligned_cols=254 Identities=23% Similarity=0.398 Sum_probs=202.4
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCe--EEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDT--VAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 763 (964)
.++|+..+.||+|+||.||+|+.. ++.. ||+|++.... .....+.+.+|+.+++++ +||||+++++++.+.+..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 468999999999999999999764 4554 4999887432 333446788999999999 8999999999999999999
Q ss_pred EEEEeccCCCHHHHhhhcC--------------CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC
Q 037111 764 LVYEYLERGSLARILSSET--------------ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY 829 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~ 829 (964)
+||||+++|+|.+++.... ...+++..++.++.|+++||+|||++ +|+||||||+||+++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCC
Confidence 9999999999999997543 34689999999999999999999999 999999999999999999
Q ss_pred ceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCCh
Q 037111 830 EAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANM 908 (964)
Q Consensus 830 ~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~ 908 (964)
.+||+|||+++...... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||... ..
T Consensus 180 ~~kL~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~-----------~~ 247 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-----------TC 247 (327)
T ss_dssp CEEECCTTCEESSCEEC-CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-----------CH
T ss_pred eEEEcccCcCccccccc-cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCC-----------cH
Confidence 99999999997433221 1223456789999999998889999999999999999998 99997532 22
Q ss_pred hHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 909 NEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.+....+........ .......+.+++.+||+.||++|||++++++.|+
T Consensus 248 ~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 296 (327)
T 1fvr_A 248 AELYEKLPQGYRLEK-----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 296 (327)
T ss_dssp HHHHHHGGGTCCCCC-----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHhhcCCCCCC-----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 333333333221111 1123456888999999999999999999999875
No 218
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=8.1e-37 Score=340.17 Aligned_cols=261 Identities=24% Similarity=0.350 Sum_probs=205.8
Q ss_pred HHHHhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhC--CCCCceeeEEeeeecCc-
Q 037111 684 IIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTG--VRHRNIVKFYGFCSHAR- 760 (964)
Q Consensus 684 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~- 760 (964)
.....++|+..+.||+|+||.||+|+. +++.||||++... ....+.+|++++.. ++||||+++++++....
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~ 110 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNG 110 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence 344567899999999999999999988 4899999998532 23567778888766 78999999999998875
Q ss_pred ---eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEeccCCCCCeEECCCC
Q 037111 761 ---HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMH--------HECRPPIVHRDVSSKNVLLDFEY 829 (964)
Q Consensus 761 ---~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~iiH~dlkp~Nill~~~~ 829 (964)
..++||||+++|+|.+++... .+++..++.++.|++.|++||| +. +|+||||||+||+++.++
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~ 184 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNG 184 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTS
T ss_pred ccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCC
Confidence 789999999999999999653 4889999999999999999999 66 999999999999999999
Q ss_pred ceEEeccCcccccCCCCCC----ccccccccccccccccccC------CCCcchhHHHHHHHHHHHHhC----------C
Q 037111 830 EAHVSDFGTAKLLKPDSSN----WSELAGTYGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKG----------Q 889 (964)
Q Consensus 830 ~~kl~Dfg~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~sDvwSlGvll~el~tg----------~ 889 (964)
.+||+|||++......... .....||+.|+|||.+.+. .++.++||||||+++|||+|| +
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~ 264 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 264 (342)
T ss_dssp CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence 9999999999876544322 2345789999999998765 234689999999999999999 5
Q ss_pred CCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc-ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 890 HPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL-EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 890 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.||..... ...........+......+... .....++...+.+++.+||+.||++|||+.+|++.|+
T Consensus 265 ~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 265 LPYYDLVP------SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332 (342)
T ss_dssp CTTTTTSC------SSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred cCccccCc------CcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 55532211 1112223333333333322211 1123467778999999999999999999999999885
No 219
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.4e-37 Score=332.08 Aligned_cols=249 Identities=24% Similarity=0.383 Sum_probs=197.8
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|++.+.||+|+||.||+|+.+ +|+.||||++.... ........+.+|+..++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357999999999999999999775 78999999986432 1223356788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++++|.+++.... .+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||.+......
T Consensus 90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 99999999999997653 488999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPW 924 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (964)
. ......+++.|+|||.+.+..+ +.++||||+|+++|+|++|+.||... ........+.......+
T Consensus 165 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-----------~~~~~~~~~~~~~~~~~- 231 (276)
T 2h6d_A 165 E-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE-----------HVPTLFKKIRGGVFYIP- 231 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS-----------SHHHHHHHHHHCCCCCC-
T ss_pred c-ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC-----------cHHHHHHHhhcCcccCc-
Confidence 2 2234568999999999988765 58999999999999999999998532 22233333333322211
Q ss_pred cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 925 LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 925 ~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+.+++.+||+.||++|||++++++
T Consensus 232 -----~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 232 -----EYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp -----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -----hhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 112345788899999999999999999986
No 220
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.5e-37 Score=360.83 Aligned_cols=252 Identities=24% Similarity=0.373 Sum_probs=209.7
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+.+ +|+.||||++..... .......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 357999999999999999999765 789999999865432 234567899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE---CCCCceEEeccCccccc
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL---DFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a~~~ 842 (964)
|||+.+|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||++ +.++.+||+|||+++..
T Consensus 105 ~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 105 GEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp ECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 9999999999999654 3489999999999999999999999 99999999999999 56789999999999876
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
.... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.. ....+....+.......
T Consensus 180 ~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~-----------~~~~~~~~~i~~~~~~~ 246 (484)
T 3nyv_A 180 EASK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG-----------ANEYDILKKVEKGKYTF 246 (484)
T ss_dssp CCCC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHHHHHHHCCCCC
T ss_pred cccc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCC-----------CCHHHHHHHHHcCCCCC
Confidence 5443 3345679999999999876 699999999999999999999999753 22334455554444332
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+. ......+..+.+++.+||.+||++|||++|+++
T Consensus 247 ~~--~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 247 EL--PQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp CS--GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CC--cccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 21 122334566788999999999999999999875
No 221
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3.8e-37 Score=343.97 Aligned_cols=258 Identities=22% Similarity=0.350 Sum_probs=200.0
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec--------
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH-------- 758 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 758 (964)
.++|++.+.||+|+||.||+|+. .+|+.||||++............+.+|+.++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 46899999999999999999976 578999999987654444445678899999999999999999999977
Q ss_pred CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCc
Q 037111 759 ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 838 (964)
.+..++||||+++ +|.+.+.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CceEEEEEeccCC-CHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchh
Confidence 3468999999986 8888775443 3489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCC----CCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 839 AKLLKPDS----SNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 839 a~~~~~~~----~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
++...... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||....... ....+.
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--------~~~~i~ 242 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH--------QLALIS 242 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--------HHHHHH
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH--------HHHHHH
Confidence 98665322 22345578999999999876 458999999999999999999999986432100 000111
Q ss_pred hhhccCCCCCcc------------------ccchHHH------HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWL------------------EVGVEDK------LKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~------------------~~~~~~~------~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.... ..++... .....+. ...+.+++.+||..||++|||++|+++
T Consensus 243 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 243 QLCG-SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp HHHC-CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhC-CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 1110 0110000 0001111 245788999999999999999999975
No 222
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-38 Score=352.29 Aligned_cols=257 Identities=18% Similarity=0.190 Sum_probs=200.8
Q ss_pred hcccccceeecCCceeEEEEEeCC---------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceee--------
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPS---------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVK-------- 751 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-------- 751 (964)
++|++.+.||+|+||.||+|+... ++.||||++... ..+.+|+.++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 579999999999999999997763 789999998642 35778999999999999987
Q ss_pred -------EEeeeec-CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCe
Q 037111 752 -------FYGFCSH-ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNV 823 (964)
Q Consensus 752 -------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Ni 823 (964)
+++++.. +...++||||+ +|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NI 190 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENI 190 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGE
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHE
Confidence 6677765 67899999999 89999999876456699999999999999999999999 999999999999
Q ss_pred EECCCC--ceEEeccCcccccCCCCC-------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 824 LLDFEY--EAHVSDFGTAKLLKPDSS-------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 824 ll~~~~--~~kl~Dfg~a~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
+++.++ .+||+|||+++....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus 191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 270 (352)
T 2jii_A 191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN 270 (352)
T ss_dssp EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999998 999999999976653321 12344789999999999999999999999999999999999999864
Q ss_pred cccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 895 LSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..... ...........................+..+.+++.+||+.||++||++++|++.|+
T Consensus 271 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 332 (352)
T 2jii_A 271 CLPNT------EDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLE 332 (352)
T ss_dssp GTTCH------HHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred CCcCH------HHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHH
Confidence 32100 001111111111111100000001122456888899999999999999999999885
No 223
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.7e-38 Score=347.39 Aligned_cols=265 Identities=25% Similarity=0.381 Sum_probs=205.8
Q ss_pred hhcccccceeecCCceeEEEEEe-----CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc--
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-----PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR-- 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-- 760 (964)
.++|+..+.||+|+||.||+|++ .+++.||||++... .....+.+.+|+.++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 35689999999999999999973 36889999998742 3445578999999999999999999999987654
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred ceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchh
Confidence 7899999999999999997653 3489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcccccc----CCCCCCCChhHHHH
Q 037111 841 LLKPDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS----DSSLPGANMNEAID 913 (964)
Q Consensus 841 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~----~~~~~~~~~~~~~~ 913 (964)
........ .....++..|+|||.+.+..++.++||||||+++|||+||..|+....... ............+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHH
Confidence 76544321 123456778999999998889999999999999999999999875321100 00000000011111
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..+......+. ...++..+.+++.+||+.||++|||+.+|++.|+
T Consensus 274 ~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~ 318 (326)
T 2w1i_A 274 ELLKNNGRLPR----PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 318 (326)
T ss_dssp HHHHTTCCCCC----CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHhhcCCCCCC----CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 22211111111 1234456888999999999999999999999886
No 224
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.2e-37 Score=339.42 Aligned_cols=258 Identities=19% Similarity=0.284 Sum_probs=198.8
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeee-ecCceeEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC-SHARHSFL 764 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~l 764 (964)
..++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+|+.+++.++|++++..++++ ...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEE
Confidence 346899999999999999999975 5788999998754322 13477899999999887776666655 66778899
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE---CCCCceEEeccCcccc
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL---DFEYEAHVSDFGTAKL 841 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a~~ 841 (964)
||||+ +|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++.
T Consensus 83 v~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp EEECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEEcc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 99999 889999997543 3489999999999999999999999 99999999999999 7889999999999987
Q ss_pred cCCCCC-------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHh
Q 037111 842 LKPDSS-------NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDH 914 (964)
Q Consensus 842 ~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 914 (964)
...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ .+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--------~~~~~~ 229 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK--------RQKYER 229 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS--------SSHHHH
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhh--------hhhhhh
Confidence 654432 12345789999999999999999999999999999999999999874332111 111111
Q ss_pred hhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 915 MFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+.....+.+ ........+..+.+++.+||+.||++|||+++|++.|+
T Consensus 230 ~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (296)
T 4hgt_A 230 ISEKKMSTP-IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHHHHHHSC-HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred hhcccccch-hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 111111111 00011123456889999999999999999999999885
No 225
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=7e-37 Score=358.37 Aligned_cols=252 Identities=23% Similarity=0.370 Sum_probs=205.8
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCc-----------hhhHHHHHHHHHHHhCCCCCceeeEEee
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE-----------TTHQKEFLSEIKALTGVRHRNIVKFYGF 755 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----------~~~~~~~~~E~~~l~~l~h~niv~l~~~ 755 (964)
.++|++.+.||+|+||+||+|+.+ +++.||||++...... ....+.+.+|+.++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 468999999999999999999765 6789999998753221 1335678999999999999999999999
Q ss_pred eecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC---ceE
Q 037111 756 CSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY---EAH 832 (964)
Q Consensus 756 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~---~~k 832 (964)
+.+....++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+|
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999999996643 489999999999999999999999 999999999999998876 699
Q ss_pred EeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHH
Q 037111 833 VSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912 (964)
Q Consensus 833 l~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 912 (964)
|+|||++....... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||.. ....+..
T Consensus 190 l~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~-----------~~~~~~~ 256 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY-KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGG-----------QNDQDII 256 (504)
T ss_dssp ECCCTTCEECCTTS-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC-----------SSHHHHH
T ss_pred EEECCCCEEcCCCC-ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCC-----------CCHHHHH
Confidence 99999998765442 334567999999999987 4699999999999999999999999752 2334555
Q ss_pred HhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 913 DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+.......+. ......+..+.+++.+||.+||++|||++|+++
T Consensus 257 ~~i~~~~~~~~~--~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 257 KKVEKGKYYFDF--NDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHHHHCCCCCCH--HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHcCCCCCCc--cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 555555443321 112234456888999999999999999999875
No 226
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=8.7e-38 Score=343.88 Aligned_cols=261 Identities=23% Similarity=0.375 Sum_probs=207.8
Q ss_pred HHHHHhhcccccceeecCCceeEEEEEe------CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEee
Q 037111 683 EIIRSINNFDESFCIGRGGYGSVYKAEL------PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGF 755 (964)
Q Consensus 683 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 755 (964)
+.....++|++.+.||+|+||.||+|+. .+++.||||++.... .....+.+.+|+.+++++ +||||++++++
T Consensus 21 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 99 (316)
T 2xir_A 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGA 99 (316)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-CcHHHHHHHHHHHHHHhcccCCCeeeEEEE
Confidence 3334457899999999999999999964 356789999987532 334456789999999999 69999999999
Q ss_pred eecCc-eeEEEEEeccCCCHHHHhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCC
Q 037111 756 CSHAR-HSFLVYEYLERGSLARILSSETA--------------TEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSS 820 (964)
Q Consensus 756 ~~~~~-~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp 820 (964)
+...+ ..++||||+++|+|.+++..... ..+++..+..++.|+++|++|||+. +|+||||||
T Consensus 100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp 176 (316)
T 2xir_A 100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 176 (316)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCcc
Confidence 87754 58999999999999999976432 2278899999999999999999999 999999999
Q ss_pred CCeEECCCCceEEeccCcccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCcccc
Q 037111 821 KNVLLDFEYEAHVSDFGTAKLLKPDSSN--WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSS 897 (964)
Q Consensus 821 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~ 897 (964)
+||+++.++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||.....
T Consensus 177 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~ 256 (316)
T 2xir_A 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256 (316)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred ceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccch
Confidence 9999999999999999999876544322 234467889999999999999999999999999999998 9999853221
Q ss_pred ccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 898 LSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
.......+........ .......+.+++.+||+.||++|||+.++++.|+
T Consensus 257 ----------~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 306 (316)
T 2xir_A 257 ----------DEEFCRRLKEGTRMRA-----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 306 (316)
T ss_dssp ----------SHHHHHHHHHTCCCCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----------hHHHHHHhccCccCCC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1122222222211111 0123345788999999999999999999999885
No 227
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.5e-37 Score=338.57 Aligned_cols=257 Identities=18% Similarity=0.263 Sum_probs=201.8
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeee-ecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFC-SHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+. .+++.||||++..... ...+.+|+.+++.++|+++++.++++ ......++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEE
Confidence 35799999999999999999975 5789999999864322 23578999999999988866666555 566788999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE---CCCCceEEeccCccccc
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL---DFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a~~~ 842 (964)
|||+ +|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++...
T Consensus 84 ~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 84 MELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEec-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 9999 889999997433 3589999999999999999999999 99999999999999 47889999999999876
Q ss_pred CCCCCC-------ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhh
Q 037111 843 KPDSSN-------WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHM 915 (964)
Q Consensus 843 ~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 915 (964)
...... .....|++.|+|||.+.+..++.++|||||||++|||++|+.||........ ...........
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~ 234 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK----RQKYERISEKK 234 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS----SSHHHHHHHHH
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh----hhhhhhhcccc
Confidence 554321 2345789999999999999999999999999999999999999874332111 11111111111
Q ss_pred hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 916 FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..... .......+..+.+++.+||+.||++|||+++|++.|+
T Consensus 235 ~~~~~-----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 276 (296)
T 3uzp_A 235 MSTPI-----EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHSCH-----HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred cCCch-----HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHH
Confidence 11110 0011223456888999999999999999999999885
No 228
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=8.2e-37 Score=334.27 Aligned_cols=252 Identities=21% Similarity=0.311 Sum_probs=202.4
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC--chhhHHHHHHHHHHHhCCCCCceeeEEeeee--cCce
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG--ETTHQKEFLSEIKALTGVRHRNIVKFYGFCS--HARH 761 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~ 761 (964)
..++|++.+.||+|+||.||+|... +++.||+|++..... .......+.+|+.++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 3578999999999999999999764 688999999864321 1234577999999999999999999999984 4568
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+++| +.+++.......+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||.+..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999886 88888776666799999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC--CCccccccccccccccccccCC--CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 842 LKPDS--SNWSELAGTYGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 842 ~~~~~--~~~~~~~g~~~y~aPE~~~~~~--~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
..... .......|++.|+|||.+.+.. ++.++||||+|+++|||++|+.||... ...+....+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----------~~~~~~~~i~~ 227 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD-----------NIYKLFENIGK 227 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS-----------SHHHHHHHHHH
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc-----------hHHHHHHHHhc
Confidence 65432 2233556899999999987644 377999999999999999999998532 22333344333
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+ ......+.+++.+||+.||++|||++++++
T Consensus 228 ~~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 228 GSYAIP------GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp CCCCCC------SSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCCCCC------CccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 333221 123355778899999999999999999986
No 229
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.7e-37 Score=346.56 Aligned_cols=256 Identities=21% Similarity=0.339 Sum_probs=206.8
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchh---------------hHHHHHHHHHHHhCCCCCceeeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETT---------------HQKEFLSEIKALTGVRHRNIVKF 752 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~E~~~l~~l~h~niv~l 752 (964)
.++|++.+.||+|+||.||+|+. +++.||||++........ ....+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999988 899999999864321111 12788999999999999999999
Q ss_pred EeeeecCceeEEEEEeccCCCHHHH------hhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCeEE
Q 037111 753 YGFCSHARHSFLVYEYLERGSLARI------LSSETATEMDWSKRVNVIKGVAHALSYMHH-ECRPPIVHRDVSSKNVLL 825 (964)
Q Consensus 753 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~dlkp~Nill 825 (964)
++++.+.+..++||||+++|+|.++ +.......+++..+..++.|++.|++|||+ . +|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 9999999999999999999999999 655446679999999999999999999999 8 99999999999999
Q ss_pred CCCCceEEeccCcccccCCCCCCccccccccccccccccccC-CCCc-chhHHHHHHHHHHHHhCCCCCCccccccCCCC
Q 037111 826 DFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM-KVTE-KCDVYSFGVLALEVIKGQHPKDLLSSLSDSSL 903 (964)
Q Consensus 826 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~ 903 (964)
+.++.+||+|||.+...... ......|++.|+|||.+.+. .++. ++||||||+++|||++|+.||.....
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------ 257 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS------ 257 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC------
T ss_pred cCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc------
Confidence 99999999999999876443 33456789999999999877 5666 99999999999999999999863322
Q ss_pred CCCChhHHHHhhhccCCCCCcc-------------ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 904 PGANMNEAIDHMFDARLPPPWL-------------EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+....+.......+.. ..........+.+++.+||+.||++||+++|+++
T Consensus 258 ----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 258 ----LVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp ----SHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ----HHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 123333333222221100 0001234456888999999999999999999986
No 230
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3.7e-37 Score=351.44 Aligned_cols=254 Identities=21% Similarity=0.289 Sum_probs=192.5
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccC------chhhHHHHHHHHHHHhCCCCCceeeEEeeeecC
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTG------ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 759 (964)
..++|+..+.||+|+||+||+|.. .+++.||||++..... .......+.+|+.++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 456899999999999999999965 4689999999865321 11122357899999999999999999999865
Q ss_pred ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC---ceEEecc
Q 037111 760 RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY---EAHVSDF 836 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~---~~kl~Df 836 (964)
+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+||
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred CceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeec
Confidence 4579999999999999998643 4589999999999999999999999 999999999999997544 5999999
Q ss_pred CcccccCCCCCCcccccccccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 837 GTAKLLKPDSSNWSELAGTYGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 837 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
|+++..... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..... .. ....
T Consensus 287 G~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~-------~~---~~~~ 355 (419)
T 3i6u_A 287 GHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-------QV---SLKD 355 (419)
T ss_dssp STTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS-------SC---CHHH
T ss_pred ccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc-------hH---HHHH
Confidence 999876543 22345679999999999863 5688899999999999999999999863221 11 1122
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+........ ..........+.+++.+||+.||++||+++|+++
T Consensus 356 ~i~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 356 QITSGKYNFI--PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHTTCCCCC--HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhcCCCCCC--chhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 2222222211 1112234456888999999999999999999986
No 231
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-37 Score=348.33 Aligned_cols=255 Identities=22% Similarity=0.322 Sum_probs=202.4
Q ss_pred hhcccccceeecCCceeEEEEEe----CCCCeEEEEEeccccC--chhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCc
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL----PSGDTVAVKKLHSFTG--ETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHAR 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 760 (964)
.++|++.+.||+|+||.||+|+. .+++.||||+++.... .......+.+|+.+++.+ +||||+++++++..++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46899999999999999999976 4789999999864321 122234567899999998 6999999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 9999999999999999997653 488999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC-CCcccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 841 LLKPDS-SNWSELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 841 ~~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ..........+..
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-------~~~~~~~~~~~~~ 280 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE-------KNSQAEISRRILK 280 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS-------CCCHHHHHHHHHH
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCc-------cchHHHHHHHHhc
Confidence 654332 22334579999999999985 3478999999999999999999999863322 1112233333333
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRP-----NMQIVCKL 960 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP-----s~~evl~~ 960 (964)
...+.+ ......+.+++.+||..||++|| +++++++.
T Consensus 281 ~~~~~~------~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 281 SEPPYP------QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp CCCCCC------TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred cCCCCC------cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 222211 12334577888999999999999 89998753
No 232
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.6e-37 Score=339.11 Aligned_cols=255 Identities=21% Similarity=0.367 Sum_probs=200.9
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeee----cCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCS----HARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~ 763 (964)
++|+..+.||+|+||.||+|+. .+++.||||++.. ........+.+|+.+++.++||||+++++++. .....+
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILC--HEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEE--SSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEec--CCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 5799999999999999999976 5789999999864 23445678899999999999999999999986 345789
Q ss_pred EEEEeccCCCHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 764 LVYEYLERGSLARILSSE--TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
+||||+++|+|.+++... ....+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 999999999999999752 345689999999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCCC---------ccccccccccccccccccCC---CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChh
Q 037111 842 LKPDSSN---------WSELAGTYGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMN 909 (964)
Q Consensus 842 ~~~~~~~---------~~~~~g~~~y~aPE~~~~~~---~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~ 909 (964)
....... .....|++.|+|||.+.+.. ++.++||||||+++|||++|+.||....... ....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~ 257 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG------DSVA 257 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT------SCHH
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc------chhh
Confidence 5422111 12335789999999987554 6889999999999999999999985322110 1111
Q ss_pred HHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 910 EAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
..... ....+.. ......+.+++.+||+.||++||+++++++.|+
T Consensus 258 ~~~~~--~~~~~~~------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 258 LAVQN--QLSIPQS------PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp HHHHC--C--CCCC------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhhc--cCCCCcc------ccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 11111 1111111 123456888999999999999999999999885
No 233
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=334.12 Aligned_cols=251 Identities=25% Similarity=0.410 Sum_probs=201.5
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
..++|+..+.||+|+||.||+|..+ +|+.||||++.... ....+.+|+.++++++||||+++++++...+..++|
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 102 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence 3467999999999999999999765 58999999987432 236788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++|+|.+++... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 103 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (314)
T 3com_A 103 MEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT 178 (314)
T ss_dssp EECCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred eecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence 9999999999999643 34589999999999999999999999 9999999999999999999999999999876655
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCcc
Q 037111 846 SSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWL 925 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 925 (964)
........|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ......+.....+ ..
T Consensus 179 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~~~~~~~-~~- 245 (314)
T 3com_A 179 MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP-----------MRAIFMIPTNPPP-TF- 245 (314)
T ss_dssp BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH-----------HHHHHHHHHSCCC-CC-
T ss_pred ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh-----------HHHHHHHhcCCCc-cc-
Confidence 4444556789999999999999999999999999999999999999853221 1122221111111 10
Q ss_pred ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 926 EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 926 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.........+.+++.+||+.||++|||+.++++
T Consensus 246 -~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 246 -RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp -SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 011223456888999999999999999999975
No 234
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.1e-36 Score=342.38 Aligned_cols=263 Identities=20% Similarity=0.290 Sum_probs=193.9
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc------
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR------ 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 760 (964)
.++|+..+.||+|+||.||+|... +++.||||++............+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 357999999999999999999654 6889999999765445556678899999999999999999999997654
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
..++||||+++ +|.+++.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred ceEEEEEcCCC-CHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 78999999975 88888842 388999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccC-------CCCCCC----Chh
Q 037111 841 LLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD-------SSLPGA----NMN 909 (964)
Q Consensus 841 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~-------~~~~~~----~~~ 909 (964)
...... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||........ ...+.. ...
T Consensus 176 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 176 TAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred cccccc-ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 654332 23345789999999999999999999999999999999999999864322100 000000 000
Q ss_pred HHHHhhhccC--CC------------CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 910 EAIDHMFDAR--LP------------PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 910 ~~~~~~~~~~--~~------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......... .. .+............+.+++.+||..||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0000000000 00 00001112334567889999999999999999999986
No 235
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=340.83 Aligned_cols=252 Identities=25% Similarity=0.384 Sum_probs=196.9
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeec------
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSH------ 758 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~------ 758 (964)
..++|++.+.||+|+||.||+|+. .+++.||||++.... .....+.+|+.+++++ +||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~ 98 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 98 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CC
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccc
Confidence 456899999999999999999976 478999999986432 2236788999999998 79999999999976
Q ss_pred CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCc
Q 037111 759 ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGT 838 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~ 838 (964)
....++||||+++|+|.+++.......+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 175 (326)
T 2x7f_A 99 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGV 175 (326)
T ss_dssp CCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTT
T ss_pred cceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcC
Confidence 46789999999999999999876556689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCCccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
+..............|++.|+|||.+. +..++.++||||||+++|+|++|+.||.... ......
T Consensus 176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----------~~~~~~ 244 (326)
T 2x7f_A 176 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH-----------PMRALF 244 (326)
T ss_dssp TC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC-----------HHHHHH
T ss_pred ceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc-----------HHHHHH
Confidence 987654433344567899999999987 5668999999999999999999999985322 112222
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+.....+... .......+.+++.+||+.||++||+++++++
T Consensus 245 ~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 245 LIPRNPAPRLK----SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHHSCCCCCS----CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HhhcCccccCC----ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 22222222110 1122356788889999999999999999986
No 236
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.2e-36 Score=329.79 Aligned_cols=253 Identities=22% Similarity=0.356 Sum_probs=207.9
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
..++|++.+.||+|+||.||+|+.+ +++.||||++............+.+|+.++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4568999999999999999999765 789999999976544455567899999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC---CceEEeccCccccc
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE---YEAHVSDFGTAKLL 842 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~---~~~kl~Dfg~a~~~ 842 (964)
|||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.+ +.+||+|||++...
T Consensus 100 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 99999999999986543 488999999999999999999999 99999999999999764 46999999999866
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCC
Q 037111 843 KPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPP 922 (964)
Q Consensus 843 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (964)
.... ......+++.|+|||.+.+ .++.++||||||+++|+|++|+.||... ...+....+.......
T Consensus 175 ~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~-----------~~~~~~~~~~~~~~~~ 241 (287)
T 2wei_A 175 QQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK-----------NEYDILKRVETGKYAF 241 (287)
T ss_dssp CCCS-SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS-----------SHHHHHHHHHHCCCCC
T ss_pred cCCC-ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCC-----------CHHHHHHHHHcCCCCC
Confidence 5432 2234468899999998875 4899999999999999999999997532 2223344443333332
Q ss_pred CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+. ......+.++.+++.+||+.||++|||++++++
T Consensus 242 ~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 242 DL--PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CS--GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred Cc--hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 21 111233456888999999999999999999986
No 237
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=5.8e-37 Score=332.86 Aligned_cols=254 Identities=21% Similarity=0.359 Sum_probs=190.6
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||+||+|+. .+++.||||++..........+.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46899999999999999999976 47889999999764444444445556666688899999999999999999999999
Q ss_pred EeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCC
Q 037111 767 EYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKP 844 (964)
Q Consensus 767 e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 844 (964)
||+++ +|.+++.. .....+++..+..++.|++.|++|||++. +|+||||||+||+++.++.+||+|||++.....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 99975 98888764 24456999999999999999999999842 899999999999999999999999999986654
Q ss_pred CCCCcccccccccccccccc----ccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 845 DSSNWSELAGTYGYVAPELA----YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 845 ~~~~~~~~~g~~~y~aPE~~----~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
... .....|++.|+|||.+ .+..++.++||||+|+++|||++|+.||.... ..............
T Consensus 163 ~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----------~~~~~~~~~~~~~~ 231 (290)
T 3fme_A 163 DVA-KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG----------TPFQQLKQVVEEPS 231 (290)
T ss_dssp --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS----------CHHHHHHHHHHSCC
T ss_pred ccc-ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC----------chHHHHHHHhccCC
Confidence 322 2334689999999996 56678999999999999999999999985311 11222333333322
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+... .......+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~~----~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 232 PQLP----ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CCCC----TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCcc----cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 2211 1123456788999999999999999999875
No 238
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=7.8e-37 Score=343.21 Aligned_cols=246 Identities=15% Similarity=0.143 Sum_probs=196.9
Q ss_pred hhcccccceeecCCceeEEEEE------eCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC---CCceeeEEeeeec
Q 037111 688 INNFDESFCIGRGGYGSVYKAE------LPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR---HRNIVKFYGFCSH 758 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 758 (964)
.++|++.+.||+|+||+||+|. ..+++.||||++... ...++..|+.+++.++ |+||+++++++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 3579999999999999999993 457889999998642 2356777888877776 9999999999999
Q ss_pred CceeEEEEEeccCCCHHHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC--------
Q 037111 759 ARHSFLVYEYLERGSLARILSSE---TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF-------- 827 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~-------- 827 (964)
.+..++||||+++|+|.+++... ....+++..+..++.||+.||+|||++ +||||||||+||+++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccc
Confidence 99999999999999999999752 345699999999999999999999999 9999999999999998
Q ss_pred ---CCceEEeccCcccccCC--CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC
Q 037111 828 ---EYEAHVSDFGTAKLLKP--DSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS 902 (964)
Q Consensus 828 ---~~~~kl~Dfg~a~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~ 902 (964)
++.+||+|||+|+.+.. .........||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-- 293 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-- 293 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE--
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce--
Confidence 89999999999976542 22334556799999999999999999999999999999999999999853322100
Q ss_pred CCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhc
Q 037111 903 LPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRP-NMQIVCKLLS 962 (964)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP-s~~evl~~L~ 962 (964)
......+..+ ....+.+++..|++.+|.+|+ +++++.+.|+
T Consensus 294 ------------~~~~~~~~~~-------~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~ 335 (365)
T 3e7e_A 294 ------------KPEGLFRRLP-------HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLK 335 (365)
T ss_dssp ------------EECSCCTTCS-------SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred ------------eechhccccC-------cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence 0011111110 123455677799999999985 6777776654
No 239
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1e-37 Score=351.81 Aligned_cols=243 Identities=14% Similarity=0.177 Sum_probs=190.1
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEecccc-CchhhHHHHHHHH---HHHhCCCCCceeeEE-------ee
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFT-GETTHQKEFLSEI---KALTGVRHRNIVKFY-------GF 755 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~ 755 (964)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... ......+.+.+|+ ..+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35799999999999999999986 469999999987432 2334557888999 556666899999998 66
Q ss_pred eecCc-----------------eeEEEEEeccCCCHHHHhhhcCCC-----CCCHHHHHHHHHHHHHHHHHHhhCCCCCe
Q 037111 756 CSHAR-----------------HSFLVYEYLERGSLARILSSETAT-----EMDWSKRVNVIKGVAHALSYMHHECRPPI 813 (964)
Q Consensus 756 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~~-----~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 813 (964)
+.+.+ ..|+||||+ +|+|.+++...... .+++..+..++.||+.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 55543 278999999 67999999764321 233578889999999999999999 99
Q ss_pred EeccCCCCCeEECCCCceEEeccCcccccCCCCCCccccccccccccccccccC-----------CCCcchhHHHHHHHH
Q 037111 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM-----------KVTEKCDVYSFGVLA 882 (964)
Q Consensus 814 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~sDvwSlGvll 882 (964)
+||||||+||+++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 9999999999999999999999999986432 3345567 999999999887 899999999999999
Q ss_pred HHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 883 LEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 883 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
|||++|+.||....... ....+.... ...+..+.+++.+||+.||++||++.++++
T Consensus 304 ~elltg~~Pf~~~~~~~-----------~~~~~~~~~----------~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 304 YWIWCADLPITKDAALG-----------GSEWIFRSC----------KNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHSSCCC------C-----------CSGGGGSSC----------CCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHCCCCCccccccc-----------chhhhhhhc----------cCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999999986432211 011111110 112345788899999999999999999985
No 240
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.6e-37 Score=335.74 Aligned_cols=252 Identities=22% Similarity=0.350 Sum_probs=199.3
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|++.+.||+|+||.||+|+.+ +++.||+|++... .......+.+|+.+++.++||||+++++++.+++..++||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 95 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI 95 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC--CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence 357999999999999999999775 5889999998643 2334578899999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 96 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (302)
T 2j7t_A 96 EFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 171 (302)
T ss_dssp ECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH
T ss_pred EeCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccc
Confidence 9999999999986543 3489999999999999999999999 99999999999999999999999999875432221
Q ss_pred CCcccccccccccccccc-----ccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 847 SNWSELAGTYGYVAPELA-----YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~-----~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.......|++.|+|||.+ .+..++.++||||||+++|+|++|+.||.... .......+.....+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----------~~~~~~~~~~~~~~ 240 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN-----------PMRVLLKIAKSDPP 240 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC-----------HHHHHHHHHHSCCC
T ss_pred cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC-----------HHHHHHHHhccCCc
Confidence 122345689999999998 36678999999999999999999999975322 22233333322222
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
... .....+..+.+++.+||+.||++|||+.++++
T Consensus 241 ~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 241 TLL---TPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp CCS---SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ccC---CccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 111 11233456788999999999999999999875
No 241
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.7e-37 Score=345.85 Aligned_cols=260 Identities=21% Similarity=0.312 Sum_probs=183.2
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC------ce
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA------RH 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 761 (964)
++|+..+.||+|+||.||+|.. .+|+.||||++..........+.+.+|+.+++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 5799999999999999999965 5788999999876444555667888999999999999999999998654 56
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++|+||+ +++|.+++.. ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 109 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC------
T ss_pred EEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 79999999 6799999864 3589999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC-------------CCCCCC
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS-------------SLPGAN 907 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~-------------~~~~~~ 907 (964)
.... .....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||......... ......
T Consensus 182 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~ 258 (367)
T 2fst_X 182 TADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258 (367)
T ss_dssp ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCC
T ss_pred cccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 5432 234578999999999887 67899999999999999999999998533211000 000000
Q ss_pred hhHHHHhhhc--cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 908 MNEAIDHMFD--ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 908 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ........ ...+..............+.+++.+||..||++|||++|+++
T Consensus 259 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 259 S-ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp C-HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred h-HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 0 00000000 001111011111122356788999999999999999999975
No 242
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.4e-37 Score=334.81 Aligned_cols=254 Identities=25% Similarity=0.391 Sum_probs=197.2
Q ss_pred hcccccceeecCCceeEEEEEeC--CCC--eEEEEEecccc-CchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP--SGD--TVAVKKLHSFT-GETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
++|+..+.||+|+||+||+|++. +++ .||||+++... ......+.+.+|+.++++++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 57999999999999999999753 333 58999886432 23345678999999999999999999999998765 88
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +++||||||+||+++.++.+||+|||++....
T Consensus 97 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 9999999999999997643 3488999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 844 PDSSN---WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 844 ~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
..... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||... ...+....+....
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~-----------~~~~~~~~~~~~~ 241 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL-----------NGSQILHKIDKEG 241 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC-----------CHHHHHHHHHTSC
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC-----------CHHHHHHHHHccC
Confidence 44332 123457788999999998889999999999999999999 99997532 2233444443332
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...+. ....+..+.+++.+||+.||++|||+.++++.|+
T Consensus 242 ~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 280 (291)
T 1u46_A 242 ERLPR----PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 280 (291)
T ss_dssp CCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCC----CcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 22211 1234456888999999999999999999999885
No 243
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.7e-37 Score=347.71 Aligned_cols=254 Identities=9% Similarity=0.016 Sum_probs=182.0
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHH---HHHHhCCCCCceeeEE-------eee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSE---IKALTGVRHRNIVKFY-------GFC 756 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E---~~~l~~l~h~niv~l~-------~~~ 756 (964)
.+|+..+.||+|+||+||+|+.. +|+.||||++..... .......+.+| +..++. +||||++++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 45899999999999999999764 788999999986443 33445567777 455666 799988755 444
Q ss_pred ecC-----------------ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHH------HHHHHHHHHHHHHHhhCCCCCe
Q 037111 757 SHA-----------------RHSFLVYEYLERGSLARILSSETATEMDWSKR------VNVIKGVAHALSYMHHECRPPI 813 (964)
Q Consensus 757 ~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~~~~i 813 (964)
... ...|+||||++ |+|.+++...... +++..+ ..++.||++||+|||++ +|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~i 215 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFV-YVFRGDEGILALHILTAQLIRLAANLQSK---GL 215 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccc-cchhhhhhhhhHHHHHHHHHHHHHHHHHC---CC
Confidence 332 34799999999 7999999764322 345555 67889999999999999 99
Q ss_pred EeccCCCCCeEECCCCceEEeccCcccccCCCCCCcccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCC
Q 037111 814 VHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGQHP 891 (964)
Q Consensus 814 iH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwSlGvll~el~tg~~p 891 (964)
+||||||+||+++.++.+||+|||+++..... .....+++.|+|||.+.+ ..++.++|||||||++|||++|+.|
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR---GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTCE---EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCCC---ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999865422 224456799999999987 6799999999999999999999999
Q ss_pred CCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 892 KDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
|..........+..... ..........+ .....+..+.+++.+||+.||++|||+.++++
T Consensus 293 f~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 293 FGLVTPGIKGSWKRPSL----RVPGTDSLAFG----SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TTBCCTTCTTCCCBCCT----TSCCCCSCCCT----TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCcCcccccchhhhhh----hhccccccchh----hccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 97553321111110000 00001111111 11233456888999999999999999999864
No 244
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.7e-36 Score=346.76 Aligned_cols=197 Identities=20% Similarity=0.301 Sum_probs=172.0
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCC------CCCceeeEEeeeecCc
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV------RHRNIVKFYGFCSHAR 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~ 760 (964)
..+|++.+.||+|+||.||+|... +++.||||++.. .......+.+|+.+++.+ +|+||+++++++....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 172 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN---EKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECC---ccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence 357999999999999999999654 688999999864 233345667777776655 6789999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc--eEEeccCc
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE--AHVSDFGT 838 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~--~kl~Dfg~ 838 (964)
..++||||+. |+|.+++.......+++..+..++.||+.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 173 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 173 HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 9999999996 5999999887767799999999999999999999999 9999999999999999987 99999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 249 a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 301 (429)
T 3kvw_A 249 SCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301 (429)
T ss_dssp CEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence 9765433 2345789999999999999999999999999999999999999854
No 245
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=8.3e-37 Score=337.63 Aligned_cols=257 Identities=22% Similarity=0.351 Sum_probs=201.0
Q ss_pred HhhcccccceeecCCceeEEEEEe--CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC---CCCceeeEEeeee----
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL--PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV---RHRNIVKFYGFCS---- 757 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~---- 757 (964)
..++|++.+.||+|+||.||+|+. .+++.||+|++............+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 446899999999999999999987 3678899999875433332233455677766555 8999999999987
Q ss_pred -cCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEecc
Q 037111 758 -HARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDF 836 (964)
Q Consensus 758 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Df 836 (964)
.....++||||++ |+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecC
Confidence 5568899999998 5999999876666699999999999999999999999 9999999999999999999999999
Q ss_pred CcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhh
Q 037111 837 GTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF 916 (964)
Q Consensus 837 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (964)
|.++...... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ......+.
T Consensus 165 g~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----------~~~~~~i~ 232 (326)
T 1blx_A 165 GLARIYSFQM-ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-----------VDQLGKIL 232 (326)
T ss_dssp CSCCCCCGGG-GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----------HHHHHHHH
T ss_pred cccccccCCC-CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH-----------HHHHHHHH
Confidence 9997654322 23345789999999999999999999999999999999999999864321 11111111
Q ss_pred cc---------------------CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 917 DA---------------------RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 917 ~~---------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.. .................+.+++.+||+.||++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 233 DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 00000011111234456788999999999999999999984
No 246
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=7.9e-37 Score=343.03 Aligned_cols=262 Identities=21% Similarity=0.289 Sum_probs=198.7
Q ss_pred HHHHHHHhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCc---------hhhHHHHHHHHHHHhCCCCCceee
Q 037111 681 YEEIIRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGE---------TTHQKEFLSEIKALTGVRHRNIVK 751 (964)
Q Consensus 681 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------~~~~~~~~~E~~~l~~l~h~niv~ 751 (964)
..++....++|+..+.||+|+||.||+|...+|+.||||++...... ....+.+.+|+.++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 45666777899999999999999999998888999999998643221 222467899999999999999999
Q ss_pred EEeeeec-----CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC
Q 037111 752 FYGFCSH-----ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD 826 (964)
Q Consensus 752 l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~ 826 (964)
+++++.. ....++||||++ |+|.+++... ...+++..+..++.||+.||+|||+. +|+||||||+||+++
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLA 168 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEc
Confidence 9999843 346899999998 5888888644 34589999999999999999999999 999999999999999
Q ss_pred CCCceEEeccCcccccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCC
Q 037111 827 FEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPG 905 (964)
Q Consensus 827 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~ 905 (964)
.++.+||+|||++....... ......|++.|+|||.+.+ ..++.++||||+||++|+|++|+.||.....
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-------- 239 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTADA-NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF-------- 239 (362)
T ss_dssp TTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------
T ss_pred CCCCEEEEecCccccccccc-ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH--------
Confidence 99999999999997544332 2334578999999999876 6789999999999999999999999864221
Q ss_pred CChhHHHHhhhc-----------------------c---CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 906 ANMNEAIDHMFD-----------------------A---RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 906 ~~~~~~~~~~~~-----------------------~---~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+....+.. . ..+..............+.+++.+||+.||++|||++|+++
T Consensus 240 ---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 240 ---YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp ---HHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---HHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 111111110 0 11111111111223456888999999999999999999985
No 247
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.9e-36 Score=330.18 Aligned_cols=254 Identities=21% Similarity=0.328 Sum_probs=206.4
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCc-------hhhHHHHHHHHHHHhCCC-CCceeeEEeeee
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGE-------TTHQKEFLSEIKALTGVR-HRNIVKFYGFCS 757 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 757 (964)
..++|+..+.||+|+||.||+|..+ +++.||||++...... ....+.+.+|+.+++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3568999999999999999999765 6889999998643211 223456889999999995 999999999999
Q ss_pred cCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccC
Q 037111 758 HARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFG 837 (964)
Q Consensus 758 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg 837 (964)
..+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEeccc
Confidence 999999999999999999999764 3489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCccccccccccccccccc------cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHH
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAY------TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEA 911 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 911 (964)
.+....... ......|++.|+|||.+. ...++.++||||||+++|||++|+.||... .....
T Consensus 170 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~-----------~~~~~ 237 (298)
T 1phk_A 170 FSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR-----------KQMLM 237 (298)
T ss_dssp TCEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----------SHHHH
T ss_pred chhhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc-----------cHHHH
Confidence 998765433 234557899999999885 456889999999999999999999997532 12233
Q ss_pred HHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 912 IDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+.......+. ......+..+.+++.+||+.||++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 238 LRMIMSGNYQFGS--PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHHTCCCCCT--TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHhcCCcccCc--ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 3333333322111 112234566888999999999999999999875
No 248
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-36 Score=342.89 Aligned_cols=252 Identities=23% Similarity=0.310 Sum_probs=194.4
Q ss_pred HHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec------
Q 037111 686 RSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH------ 758 (964)
Q Consensus 686 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------ 758 (964)
...++|+..+.||+|+||+||+|+. .+|+.||||++..... ...+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 4557899999999999999999965 5789999999864322 12369999999999999999999843
Q ss_pred --------------------------------CceeEEEEEeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHH
Q 037111 759 --------------------------------ARHSFLVYEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSY 804 (964)
Q Consensus 759 --------------------------------~~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~ 804 (964)
....++||||+++ +|.+.+.. .....+++..+..++.||++||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 3348899999985 88887764 344569999999999999999999
Q ss_pred HhhCCCCCeEeccCCCCCeEEC-CCCceEEeccCcccccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHH
Q 037111 805 MHHECRPPIVHRDVSSKNVLLD-FEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLA 882 (964)
Q Consensus 805 LH~~~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll 882 (964)
||+. +|+||||||+||+++ .++.+||+|||+|+....... .....+|+.|+|||.+.+. .++.++||||+||++
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP-SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC-CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC-CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 9999 999999999999998 688999999999987654432 2345789999999998765 489999999999999
Q ss_pred HHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc-------------------cCCC----CCccccchHHHHHHHHHH
Q 037111 883 LEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD-------------------ARLP----PPWLEVGVEDKLKSIIEV 939 (964)
Q Consensus 883 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~----~~~~~~~~~~~~~~l~~l 939 (964)
|||++|+.||..... .+.+..+.. ...+ ..+........+..+.++
T Consensus 233 ~ell~g~~pf~~~~~-----------~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 301 (383)
T 3eb0_A 233 GELILGKPLFSGETS-----------IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDL 301 (383)
T ss_dssp HHHHHSSCSSCCSSH-----------HHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHH
T ss_pred HHHHhCCCCCCCCCh-----------HHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHH
Confidence 999999999863221 111111110 0000 111111112234568899
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 037111 940 ALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 940 i~~cl~~dp~~RPs~~evl~ 959 (964)
+.+||..||++|||+.|+++
T Consensus 302 i~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 302 LEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp HHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHccCChhhCCCHHHHhc
Confidence 99999999999999999874
No 249
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.8e-37 Score=336.60 Aligned_cols=258 Identities=25% Similarity=0.394 Sum_probs=185.7
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
..++|++.+.||+|+||.||+|... +++.||||++.... ......++.+|+.++++++||||+++++++...+..++|
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK-CQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhh-cchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 3468999999999999999999754 68899999886432 223456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHhhh------cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcc
Q 037111 766 YEYLERGSLARILSS------ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTA 839 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a 839 (964)
|||+++|+|.+++.. .....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 999999999999964 1234589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC-----Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 840 KLLKPDSS-----NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 840 ~~~~~~~~-----~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
........ ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||...... ....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----------~~~~ 237 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM-----------KVLM 237 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG-----------GHHH
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh-----------hHHH
Confidence 76543321 1234568999999999875 56899999999999999999999998643221 1111
Q ss_pred hhhccCCCCCc----cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPW----LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.......+... ...........+.+++.+||+.||++||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 238 LTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp HHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 11111111000 00011123356788999999999999999999985
No 250
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=340.11 Aligned_cols=254 Identities=22% Similarity=0.355 Sum_probs=200.9
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.++|+..+.||+|+||.||+|+.+. .||+|+++.........+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4679999999999999999998753 59999987554444444567889999999999999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC--
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD-- 845 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~-- 845 (964)
|+++++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||+++.....
T Consensus 110 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp CCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred cccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 999999999996543 4588999999999999999999999 999999999999998 689999999998755322
Q ss_pred ---CCCcccccccccccccccccc---------CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 846 ---SSNWSELAGTYGYVAPELAYT---------MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 846 ---~~~~~~~~g~~~y~aPE~~~~---------~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
........|++.|+|||.+.+ ..++.++||||||+++|||++|+.||... .......
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~-----------~~~~~~~ 253 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ-----------PAEAIIW 253 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC-----------CHHHHHH
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC-----------CHHHHHH
Confidence 122234468999999999874 45788999999999999999999998532 2223333
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhcC
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLSG 963 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~~ 963 (964)
.+.....+... . ...+..+.+++.+||+.||++|||++++++.|+.
T Consensus 254 ~~~~~~~~~~~-~---~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~ 299 (319)
T 2y4i_B 254 QMGTGMKPNLS-Q---IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEK 299 (319)
T ss_dssp HHHTTCCCCCC-C---SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTT
T ss_pred HhccCCCCCCC-c---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 33222222111 0 1123457889999999999999999999999864
No 251
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.2e-36 Score=338.40 Aligned_cols=253 Identities=22% Similarity=0.375 Sum_probs=200.0
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHH-HhCCCCCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKA-LTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
.++|+..+.||+|+||.||+|+. .+|+.||||++....... ....+..|... ++.++||||+++++++.+++..++|
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ-EQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCH-HHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcH-HHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 45799999999999999999976 578899999997543333 33455556555 7888999999999999999999999
Q ss_pred EEeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 766 YEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
|||+++ +|.+++.. .....+++..+..++.||+.||+|||+.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 999986 99999864 24456999999999999999999999732 89999999999999999999999999997664
Q ss_pred CCCCCccccccccccccccccc----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 844 PDSSNWSELAGTYGYVAPELAY----TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
... ......||+.|+|||++. ...++.++|||||||++|||++|+.||.... .....+.......
T Consensus 206 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~----------~~~~~~~~~~~~~ 274 (340)
T 3an0_A 206 DSV-AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG----------TPFQQLKQVVEEP 274 (340)
T ss_dssp CHH-HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCS----------CHHHHHHHHHHSC
T ss_pred ccc-ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcccc----------chHHHHHHHhcCC
Confidence 321 122347899999999964 3468999999999999999999999986321 1122333333332
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+... ......++.+++.+||+.||++||++.++++
T Consensus 275 ~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 275 SPQLP----ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CCCCC----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCC----cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 22211 1223456888999999999999999999875
No 252
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.3e-36 Score=330.22 Aligned_cols=250 Identities=26% Similarity=0.434 Sum_probs=193.4
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec--------
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH-------- 758 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-------- 758 (964)
.++|+..+.||+|+||.||+|+.. +++.||||++.. .......+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 467999999999999999999764 789999999864 23445778999999999999999999998854
Q ss_pred -----CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEE
Q 037111 759 -----ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHV 833 (964)
Q Consensus 759 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl 833 (964)
....++||||+++|+|.+++.... ..+++..++.++.|+++||+|||++ +|+||||||+||+++.++.+||
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl 157 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKI 157 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEE
T ss_pred cccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEE
Confidence 457899999999999999997543 3477889999999999999999999 9999999999999999999999
Q ss_pred eccCcccccCCCC--------------CCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccc
Q 037111 834 SDFGTAKLLKPDS--------------SNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSL 898 (964)
Q Consensus 834 ~Dfg~a~~~~~~~--------------~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~ 898 (964)
+|||.+....... .......|++.|+|||.+.+. .++.++||||+|+++|||++ ||...
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~--- 231 (303)
T 1zy4_A 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG--- 231 (303)
T ss_dssp CCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH---
T ss_pred eeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc---
Confidence 9999998664321 122345689999999998764 68999999999999999998 44211
Q ss_pred cCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 899 SDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....+....+.......+ .......+..+.+++.+||+.||++|||++++++
T Consensus 232 -------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 232 -------MERVNILKKLRSVSIEFP--PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp -------HHHHHHHHHHHSTTCCCC--TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -------hhHHHHHHhccccccccC--ccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111122233322221111 1112234455788899999999999999999986
No 253
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.9e-36 Score=349.00 Aligned_cols=256 Identities=18% Similarity=0.298 Sum_probs=203.5
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCC-CceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH-RNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||.||+|+. .+++.||||++...... ..+..|+.+++.++| +++..+..++...+..++||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 5799999999999999999975 57899999987643322 347789999999976 66666777777888999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE---CCCCceEEeccCcccccC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL---DFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill---~~~~~~kl~Dfg~a~~~~ 843 (964)
||+ +++|.+++.... ..+++..++.++.||+.||+|||++ +||||||||+|||+ +.++.+||+|||+++...
T Consensus 83 e~~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp ECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred ECC-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 999 889999997543 3589999999999999999999999 99999999999999 688999999999998766
Q ss_pred CCCCC-------ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhh
Q 037111 844 PDSSN-------WSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMF 916 (964)
Q Consensus 844 ~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (964)
..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ....+....+.
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~--------~~~~~~~~~i~ 229 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA--------GTKKQKYEKIS 229 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC--------SSHHHHHHHHH
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc--------hhHHHHHHHHh
Confidence 54322 1256799999999999999999999999999999999999999864322 11222223222
Q ss_pred ccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 917 DARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
....... .......++.++.+++.+||+.||++||++++|++.|+
T Consensus 230 ~~~~~~~-~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~ 274 (483)
T 3sv0_A 230 EKKVATS-IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFR 274 (483)
T ss_dssp HHHHHSC-HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred hcccccc-HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 2211111 01111233457889999999999999999999999885
No 254
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.3e-36 Score=330.69 Aligned_cols=251 Identities=21% Similarity=0.327 Sum_probs=198.2
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC--CCceeeEEeeeecCceeEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR--HRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv 765 (964)
.++|++.+.||+|+||.||+|..++++.||||++............+.+|+.++++++ ||||+++++++..+...++|
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 4579999999999999999999888999999999765555556678999999999997 59999999999999999999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|| +.+++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||++......
T Consensus 107 ~e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 179 (313)
T ss_dssp EC-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCC----
T ss_pred Ee-cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeEEEeeccccccccCc
Confidence 99 55789999997643 588999999999999999999999 999999999999996 489999999999876544
Q ss_pred CC--Ccccccccccccccccccc-----------CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHH
Q 037111 846 SS--NWSELAGTYGYVAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912 (964)
Q Consensus 846 ~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 912 (964)
.. ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||.... ......
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----------~~~~~~ 249 (313)
T 3cek_A 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII----------NQISKL 249 (313)
T ss_dssp ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC----------SHHHHH
T ss_pred cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH----------HHHHHH
Confidence 32 1234568999999999875 468889999999999999999999985321 111223
Q ss_pred HhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 913 DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.............. .....+.+++.+||+.||++||+++|+++
T Consensus 250 ~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 250 HAIIDPNHEIEFPD----IPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HHHHCTTSCCCCCC----CSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHhcccccCCcc----cchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 33333222211111 11345788889999999999999999985
No 255
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.3e-36 Score=335.16 Aligned_cols=254 Identities=22% Similarity=0.297 Sum_probs=197.1
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC------chhhHHHHHHHHHHHhCCCCCceeeEEeeeecC
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG------ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 759 (964)
..++|++.+.||+|+||.||+|... +++.||||++..... .......+.+|+.++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3468999999999999999999764 678999999864321 122234588999999999999999999999765
Q ss_pred ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc---eEEecc
Q 037111 760 RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE---AHVSDF 836 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~---~kl~Df 836 (964)
. .++||||+++|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred c-eEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccC
Confidence 5 89999999999999999643 4589999999999999999999999 9999999999999987664 999999
Q ss_pred CcccccCCCCCCccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHH
Q 037111 837 GTAKLLKPDSSNWSELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAID 913 (964)
Q Consensus 837 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 913 (964)
|+++...... ......|++.|+|||.+. ...++.++|||||||++|+|++|+.||...... . ....
T Consensus 162 g~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~---~~~~ 230 (322)
T 2ycf_A 162 GHSKILGETS-LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-------V---SLKD 230 (322)
T ss_dssp TTCEECCCCH-HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS-------S---CHHH
T ss_pred ccceeccccc-ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH-------H---HHHH
Confidence 9998764321 223456899999999974 566899999999999999999999998632211 1 1111
Q ss_pred hhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+........ ..........+.+++.+||+.||++||++.++++
T Consensus 231 ~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 231 QITSGKYNFI--PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHTCCCCC--HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHhCccccC--chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 2222222211 1111233456889999999999999999999875
No 256
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3.7e-36 Score=334.34 Aligned_cols=252 Identities=20% Similarity=0.316 Sum_probs=201.3
Q ss_pred hcccccceeecCCceeEEEEEe--CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCC------ceeeEEeeeecCc
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL--PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHR------NIVKFYGFCSHAR 760 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~~~ 760 (964)
++|++.+.||+|+||.||+|.. .+++.||||+++. .......+.+|+.+++.++|+ +++++++++.+.+
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN---VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec---CCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 5799999999999999999975 3678999999864 233456788899888887655 5999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-------------
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF------------- 827 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~------------- 827 (964)
..++||||+ +++|.+++......++++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccc
Confidence 999999999 88999999887766789999999999999999999999 9999999999999988
Q ss_pred ------CCceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC
Q 037111 828 ------EYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS 901 (964)
Q Consensus 828 ------~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~ 901 (964)
++.+||+|||.++..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||.......
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-- 241 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE-- 241 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH--
T ss_pred ccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH--
Confidence 668999999999865433 234578999999999999999999999999999999999999986332110
Q ss_pred CCCCCChhHHHHhhhccCCC------------------------------------CCccccchHHHHHHHHHHHHHccC
Q 037111 902 SLPGANMNEAIDHMFDARLP------------------------------------PPWLEVGVEDKLKSIIEVALSCVD 945 (964)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~l~~li~~cl~ 945 (964)
....+..... ..+ .............++.+++.+||+
T Consensus 242 ------~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 314 (339)
T 1z57_A 242 ------HLAMMERILG-PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLE 314 (339)
T ss_dssp ------HHHHHHHHHC-SCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC
T ss_pred ------HHHHHHHHhC-CCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhC
Confidence 0001111100 000 000011123456778999999999
Q ss_pred CCCCCCCCHHHHHH
Q 037111 946 ANPERRPNMQIVCK 959 (964)
Q Consensus 946 ~dp~~RPs~~evl~ 959 (964)
.||++|||++|+++
T Consensus 315 ~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 315 YDPAKRITLREALK 328 (339)
T ss_dssp SSTTTSCCHHHHTT
T ss_pred cCcccccCHHHHhc
Confidence 99999999999974
No 257
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.7e-36 Score=334.07 Aligned_cols=257 Identities=19% Similarity=0.288 Sum_probs=197.5
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeec--CceeEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSH--ARHSFL 764 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~l 764 (964)
++|++.+.||+|+||+||+|+. .+++.||||++.. ...+.+.+|+.++++++ ||||+++++++.+ ....++
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-----VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-----CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc-----cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 5799999999999999999965 5789999999863 22467889999999997 9999999999988 668899
Q ss_pred EEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC-ceEEeccCcccccC
Q 037111 765 VYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY-EAHVSDFGTAKLLK 843 (964)
Q Consensus 765 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~-~~kl~Dfg~a~~~~ 843 (964)
||||+++++|.+++.. +++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++...
T Consensus 111 v~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp EEECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EEeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 9999999999999842 78899999999999999999999 999999999999999777 89999999998765
Q ss_pred CCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCC---CCChhHHH-------
Q 037111 844 PDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLP---GANMNEAI------- 912 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~---~~~~~~~~------- 912 (964)
.... .....|++.|+|||.+.+ ..++.++||||+||++|||++|+.||............ ........
T Consensus 183 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 183 PGQE-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp TTCC-CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred CCCc-cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence 4432 345578999999999887 66899999999999999999999998432210000000 00000000
Q ss_pred -------HhhhccCCCCCc----cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 913 -------DHMFDARLPPPW----LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 913 -------~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...........+ ..........++.+++.+||++||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000000000 00011123466889999999999999999999986
No 258
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.1e-36 Score=344.22 Aligned_cols=257 Identities=20% Similarity=0.333 Sum_probs=201.2
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC--------CCceeeEEeeee--
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR--------HRNIVKFYGFCS-- 757 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~-- 757 (964)
++|++.+.||+|+||+||+|+. .+++.||||++.. .......+.+|+.++++++ ||||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS---AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec---CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 6799999999999999999965 4688999999863 2334567889999998885 888999999997
Q ss_pred --cCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCC------
Q 037111 758 --HARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEY------ 829 (964)
Q Consensus 758 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~------ 829 (964)
.....++||||+ +|++.+++.......+++..++.++.||+.||+|||+++ +|+||||||+||+++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhh
Confidence 566899999999 567877776665567999999999999999999999853 799999999999999775
Q ss_pred -------------------------------------------ceEEeccCcccccCCCCCCcccccccccccccccccc
Q 037111 830 -------------------------------------------EAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYT 866 (964)
Q Consensus 830 -------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~ 866 (964)
.+||+|||.++..... .....||+.|+|||++.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~~~~ 267 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEVLIG 267 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHHHHT
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChhhcC
Confidence 7999999999876533 234578999999999999
Q ss_pred CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc--cCCCC----------------------
Q 037111 867 MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD--ARLPP---------------------- 922 (964)
Q Consensus 867 ~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---------------------- 922 (964)
..++.++|||||||++|||++|+.||........ .........+.. +..+.
T Consensus 268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
T 1wak_A 268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEY-----TRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHI 342 (397)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSS-----CHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSC
T ss_pred CCCCcHHHHHHHHHHHHHHhhCCCCCCCCccccc-----CchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccc
Confidence 9999999999999999999999999964332110 000011111100 00000
Q ss_pred ----Cc--------cccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 923 ----PW--------LEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 923 ----~~--------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
++ ...........+.+++.+||+.||++|||++|+++
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 343 TKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00 00113456678899999999999999999999985
No 259
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.4e-36 Score=339.54 Aligned_cols=249 Identities=21% Similarity=0.334 Sum_probs=196.5
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCcee-----
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHS----- 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 762 (964)
++|...+.||+|+||.||+|... +|+.||||++............+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 47899999999999999999754 688999999976555555567889999999999999999999999877654
Q ss_pred -EEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 763 -FLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 763 -~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
++||||+. |+|.+++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 122 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred EEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 58988873 2389999999999999999999999 999999999999999999999999999976
Q ss_pred cCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc---
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD--- 917 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 917 (964)
.... .....||+.|+|||.+.+ ..++.++||||+||++|+|++|+.||..... .+....+..
T Consensus 194 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----------~~~~~~i~~~~~ 259 (371)
T 4exu_A 194 ADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-----------LDQLTQILKVTG 259 (371)
T ss_dssp ---------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-----------HHHHHHHHHHHC
T ss_pred cccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh-----------HHHHHHHHHHhC
Confidence 5433 234578999999999887 6789999999999999999999999864321 111111110
Q ss_pred --------------------c--CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 --------------------A--RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 --------------------~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. ..+..............+.+++.+||+.||++|||++|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 260 VPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp CCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0 00000001111223466889999999999999999999975
No 260
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.8e-36 Score=341.39 Aligned_cols=261 Identities=24% Similarity=0.313 Sum_probs=191.7
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc------ee
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR------HS 762 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~ 762 (964)
.+|+..+.||+|+||+||+|+...+..||+|++..... ...+|+.+++.++||||+++++++...+ ..
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 46999999999999999999987777899999864322 1236999999999999999999995433 37
Q ss_pred EEEEEeccCCCHHHHhh-hcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC-CCCceEEeccCccc
Q 037111 763 FLVYEYLERGSLARILS-SETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD-FEYEAHVSDFGTAK 840 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~a~ 840 (964)
++||||++++.+..... ......+++..+..++.||++||+|||++ +|+||||||+||+++ .++.+||+|||+|+
T Consensus 114 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 89999998744333322 12345689999999999999999999999 999999999999999 79999999999998
Q ss_pred ccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC----CCCCChhHHHHhh
Q 037111 841 LLKPDSSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS----LPGANMNEAIDHM 915 (964)
Q Consensus 841 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~----~~~~~~~~~~~~~ 915 (964)
....... .....+|+.|+|||.+.+. .++.++||||+||++|||++|+.||.......... ..+....+.+..+
T Consensus 191 ~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~ 269 (394)
T 4e7w_A 191 ILIAGEP-NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM 269 (394)
T ss_dssp ECCTTCC-CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred cccCCCC-CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 7654432 2345789999999998765 58999999999999999999999986432110000 0000000000000
Q ss_pred ----hccCCC----CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 916 ----FDARLP----PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 916 ----~~~~~~----~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
....++ .++..........++.+++.+||..||++|||+.|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp CGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 001111 11111111223456889999999999999999999975
No 261
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.5e-36 Score=362.12 Aligned_cols=253 Identities=23% Similarity=0.376 Sum_probs=202.8
Q ss_pred hhcccccceeecCCceeEEEEEeCC----CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPS----GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 763 (964)
.++|+..+.||+|+||.||+|.+.. +..||||+++.. ......+.+.+|+.++++++||||+++++++. ++..+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 466 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 466 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence 4678999999999999999997642 456999988643 23444578999999999999999999999985 45689
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 467 lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 9999999999999997543 3589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 844 PDSS-NWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 844 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||... ...+....+......
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~-----------~~~~~~~~i~~~~~~ 611 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV-----------KNNDVIGRIENGERL 611 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----------CHHHHHHHHHHTCCC
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCC-----------CHHHHHHHHHcCCCC
Confidence 4432 2233456789999999998999999999999999999997 88997532 223333443333222
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
+. ...++..+.+++.+||+.||++||++.++++.|+
T Consensus 612 ~~-----~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~ 647 (656)
T 2j0j_A 612 PM-----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647 (656)
T ss_dssp CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC-----CccccHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 11 1233456888999999999999999999999885
No 262
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=346.32 Aligned_cols=199 Identities=22% Similarity=0.388 Sum_probs=155.0
Q ss_pred hcccc-cceeecCCceeEEEEEeC---CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeee--cCcee
Q 037111 689 NNFDE-SFCIGRGGYGSVYKAELP---SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCS--HARHS 762 (964)
Q Consensus 689 ~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~ 762 (964)
+.|++ .++||+|+||+||+|+.+ +++.||||++..... ...+.+|+.++++++||||+++++++. .....
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSHADRKV 95 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence 44666 558999999999999865 578999999864322 246789999999999999999999995 46789
Q ss_pred EEEEEeccCCCHHHHhhhc-------CCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE----CCCCce
Q 037111 763 FLVYEYLERGSLARILSSE-------TATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL----DFEYEA 831 (964)
Q Consensus 763 ~lv~e~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill----~~~~~~ 831 (964)
++||||+.+ +|.+++... ....+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+
T Consensus 96 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 96 WLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcE
Confidence 999999975 888888532 222489999999999999999999999 99999999999999 677899
Q ss_pred EEeccCcccccCCCC---CCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCcc
Q 037111 832 HVSDFGTAKLLKPDS---SNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLL 895 (964)
Q Consensus 832 kl~Dfg~a~~~~~~~---~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~ 895 (964)
||+|||+++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 999999998765432 223456789999999999874 4899999999999999999999999643
No 263
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.6e-36 Score=334.18 Aligned_cols=249 Identities=23% Similarity=0.338 Sum_probs=183.8
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeee--------c
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCS--------H 758 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------~ 758 (964)
.+|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.+++++. ||||+++++++. .
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 47999999999999999999764 7899999998542 3445567899999999996 999999999983 3
Q ss_pred CceeEEEEEeccCCCHHHHhhh-cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeccCCCCCeEECCCCceEEec
Q 037111 759 ARHSFLVYEYLERGSLARILSS-ETATEMDWSKRVNVIKGVAHALSYMHHECRPP--IVHRDVSSKNVLLDFEYEAHVSD 835 (964)
Q Consensus 759 ~~~~~lv~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--iiH~dlkp~Nill~~~~~~kl~D 835 (964)
....++||||+. |+|.+++.. .....+++..++.++.||+.||+|||+. + |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEec
Confidence 456899999996 699999865 2344599999999999999999999998 7 99999999999999999999999
Q ss_pred cCcccccCCCCCC------------cccccccccccccccc---ccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccC
Q 037111 836 FGTAKLLKPDSSN------------WSELAGTYGYVAPELA---YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD 900 (964)
Q Consensus 836 fg~a~~~~~~~~~------------~~~~~g~~~y~aPE~~---~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~ 900 (964)
||+++........ .....|++.|+|||.+ .+..++.++||||||+++|||++|+.||......
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-- 259 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-- 259 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH--
Confidence 9999876543221 1134589999999998 5667899999999999999999999998532211
Q ss_pred CCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 901 SSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
...........+. .....+.+++.+||+.||++||+++|+++.|+
T Consensus 260 ---------~~~~~~~~~~~~~--------~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 260 ---------RIVNGKYSIPPHD--------TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp ---------------CCCCTTC--------CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred ---------HhhcCcccCCccc--------ccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111111111 11223678889999999999999999999885
No 264
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.5e-36 Score=337.67 Aligned_cols=253 Identities=23% Similarity=0.368 Sum_probs=199.2
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC-----ce
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA-----RH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 761 (964)
.++|+..+.||+|+||.||+|... +++.||||++... ........+.+|+.++++++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT-TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc-cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 357999999999999999999754 6888999998743 2344457789999999999999999999999664 46
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+.+ +|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 105 ~~iv~e~~~~-~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 177 (364)
T 3qyz_A 105 VYIVQDLMET-DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV 177 (364)
T ss_dssp EEEEEECCSE-EHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEcccCc-CHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEe
Confidence 8999999975 999998653 489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC---Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 842 LKPDSS---NWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 842 ~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
...... ......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||...... +....+..
T Consensus 178 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----------~~~~~i~~ 246 (364)
T 3qyz_A 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL-----------DQLNHILG 246 (364)
T ss_dssp CCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG-----------GHHHHHHH
T ss_pred cCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH-----------HHHHHHHH
Confidence 654322 1234579999999998754 45899999999999999999999998643221 11111100
Q ss_pred ----------------------cCCCC---CccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ----------------------ARLPP---PWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ----------------------~~~~~---~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
...+. ............++.+++.+||..||++|||++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 0000111223456889999999999999999999975
No 265
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1e-35 Score=356.03 Aligned_cols=353 Identities=18% Similarity=0.171 Sum_probs=237.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCce----eeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCC
Q 037111 25 NHNNSLLPSWTLDPVNATNITTPCT----WSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNI 100 (964)
Q Consensus 25 ~~~~~~l~sW~~~~~~~~~~~~~C~----w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~ 100 (964)
++....+++|.++ .+||. |.++.|+. .++....+....+ +.-.+++++.|++++|.+++..
T Consensus 3 g~~~~~l~~~~~~-------~~C~~~~~~~~c~~~~~-----~i~~~~~~~~~~~---~~l~l~~l~~l~l~~~~l~~lp 67 (597)
T 3oja_B 3 GQQRYNVKPRQPE-------YKCIDSNLQYDCVFYDV-----HIDMQTQDVYFGF---EDITLNNQKIVTFKNSTMRKLP 67 (597)
T ss_dssp --------CCCSE-------ECCCCC--CCSEEECSC-----EECSSCCCCEESC---SSGGGCCCSEEEESSCEESEEC
T ss_pred CcccccccCCCCC-------CcCcccCcCceeEecCc-----eecccccccccCc---ccccCCCceEEEeeCCCCCCcC
Confidence 3455678889753 44553 66665541 2222222222111 1223678899999999998665
Q ss_pred CccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCC
Q 037111 101 PSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLS 179 (964)
Q Consensus 101 p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 179 (964)
+..|+++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.+|. ++.+++|++|+|++|.+++..+..|++++
T Consensus 68 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~ 147 (597)
T 3oja_B 68 AALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTP 147 (597)
T ss_dssp THHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred HHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCC
Confidence 56678899999999999999987777888999999999998888888775 68888888888888888866566678888
Q ss_pred CCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeecc
Q 037111 180 SLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLS 259 (964)
Q Consensus 180 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 259 (964)
+|++|+|++|.+++..|..|+++++|++|+|++|.+++.. ++.+++|+.|++++|.+++ +...++|+.|+++
T Consensus 148 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls 219 (597)
T 3oja_B 148 KLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST-----LAIPIAVEELDAS 219 (597)
T ss_dssp TCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECC
T ss_pred CCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc-----ccCCchhheeecc
Confidence 8888888888888877878888888888888888888652 4556778888888887764 2344567777777
Q ss_pred ccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccc
Q 037111 260 QNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSL 339 (964)
Q Consensus 260 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~ 339 (964)
+|.++...+ .+ .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..
T Consensus 220 ~n~l~~~~~-~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~--------------------- 273 (597)
T 3oja_B 220 HNSINVVRG-PV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHP--------------------- 273 (597)
T ss_dssp SSCCCEEEC-SC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGG---------------------
T ss_pred CCccccccc-cc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHH---------------------
Confidence 777764332 22 2567777777777764 355666666666666666666555544
Q ss_pred cccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccc
Q 037111 340 PKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNAT 419 (964)
Q Consensus 340 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~ 419 (964)
|..+++|+.|+|++|.++++ +..+..+++|+.|+|++|+++. .+..+..+++|+.|+|++|.+++. .+..++
T Consensus 274 ---~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~---~~~~~~ 345 (597)
T 3oja_B 274 ---FVKMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTL---KLSTHH 345 (597)
T ss_dssp ---GTTCSSCCEEECTTSCCCEE-ECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCC---CCCTTC
T ss_pred ---hcCccCCCEEECCCCCCCCC-CcccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCCCCCc---ChhhcC
Confidence 44555555555555555543 2233445666666666666653 334455666677777777776644 256678
Q ss_pred cCcEEeccCCccccc
Q 037111 420 QLHELDFSSNHLVGK 434 (964)
Q Consensus 420 ~L~~L~Ls~N~l~~~ 434 (964)
+|+.|+|++|.+.+.
T Consensus 346 ~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 346 TLKNLTLSHNDWDCN 360 (597)
T ss_dssp CCSEEECCSSCEEHH
T ss_pred CCCEEEeeCCCCCCh
Confidence 899999999998753
No 266
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=7e-36 Score=340.96 Aligned_cols=260 Identities=26% Similarity=0.354 Sum_probs=191.6
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC------ce
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA------RH 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 761 (964)
.+|+..+.||+|+||.||+|+.. +|+.||||++.... ....+|+++++.++||||+++++++... ..
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 36899999999999999999775 68999999986432 1233699999999999999999998532 24
Q ss_pred eEEEEEeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC-CceEEeccCc
Q 037111 762 SFLVYEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE-YEAHVSDFGT 838 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~-~~~kl~Dfg~ 838 (964)
.++||||+++ ++.+.+.. .....+++..+..++.||++||+|||++ +|+||||||+|||++.+ +.+||+|||+
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchh
Confidence 6799999986 77766643 3345689999999999999999999999 99999999999999965 5689999999
Q ss_pred ccccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCccccccCCC----CCCCChhHHHH
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSS----LPGANMNEAID 913 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~----~~~~~~~~~~~ 913 (964)
++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.......... ..+....+.+.
T Consensus 204 a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 204 AKQLVRGEP-NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CEECCTTCC-CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred hhhcccCCC-ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 987654332 2345789999999998764 79999999999999999999999986322100000 00000000011
Q ss_pred hhh----ccCCC----CCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 914 HMF----DARLP----PPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 914 ~~~----~~~~~----~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+. ...++ .+|..........++.+++.+||..||++||++.|+++
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 100 00111 01111111223456889999999999999999999874
No 267
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=5.8e-36 Score=334.80 Aligned_cols=264 Identities=23% Similarity=0.338 Sum_probs=199.1
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecC-----ce
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHA-----RH 761 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 761 (964)
.++|+..+.||+|+||.||+|+.. +|+.||||++... ........+.+|+.++++++||||+++++++... ..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 357999999999999999999765 6889999998643 3344456788999999999999999999998664 67
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+. |+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARI 161 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccc
Confidence 899999997 5999998653 489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC----------cccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCcccccc-----------
Q 037111 842 LKPDSSN----------WSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLS----------- 899 (964)
Q Consensus 842 ~~~~~~~----------~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~----------- 899 (964)
....... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (353)
T 2b9h_A 162 IDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGT 241 (353)
T ss_dssp CC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred cccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCC
Confidence 6533211 223468999999998764 678999999999999999999999986432100
Q ss_pred ---CCCCCCCChhHHHHhhhc-cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 900 ---DSSLPGANMNEAIDHMFD-ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 900 ---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.............+.... ...+.............++.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000000000000000 001111111111234456789999999999999999999986
No 268
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5.6e-36 Score=334.70 Aligned_cols=258 Identities=21% Similarity=0.318 Sum_probs=196.0
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce------
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH------ 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 761 (964)
++|...+.||+|+||.||+|..+ +|+.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 46899999999999999999764 68899999997654455556788999999999999999999999987654
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.++||||+. |+|.+++.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 588888732 389999999999999999999999 999999999999999999999999999976
Q ss_pred cCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccC----------------CCCC
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSD----------------SSLP 904 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~----------------~~~~ 904 (964)
.... .....+++.|+|||.+.+ ..++.++||||+|+++|||++|+.||........ ....
T Consensus 176 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 252 (353)
T 3coi_A 176 ADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLN 252 (353)
T ss_dssp -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCS
T ss_pred CCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHh
Confidence 5432 234578999999999877 6789999999999999999999999864321100 0000
Q ss_pred CCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 905 GANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
........... .. .+..............+.+++.+||+.||++|||++++++
T Consensus 253 ~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 253 DKAAKSYIQSL-PQ-TPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp CHHHHHHHHTS-CB-CSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hHHHHHHHHhC-cC-CCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000000000 00 0000011112234566888999999999999999999975
No 269
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.1e-36 Score=329.72 Aligned_cols=251 Identities=22% Similarity=0.324 Sum_probs=191.0
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeee----------
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCS---------- 757 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~---------- 757 (964)
++|+..+.||+|+||.||+|... +++.||||++... .....+.+.+|+.++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 57999999999999999999775 5889999998642 3445678899999999999999999999874
Q ss_pred ----cCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC-CCCceE
Q 037111 758 ----HARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD-FEYEAH 832 (964)
Q Consensus 758 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~-~~~~~k 832 (964)
+....++||||++ |+|.+++.. .++++..+..++.|++.||+|||++ +|+||||||+||+++ .++.+|
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~k 161 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLK 161 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEE
T ss_pred ccccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEE
Confidence 3467899999998 599999954 3488999999999999999999999 999999999999997 567999
Q ss_pred EeccCcccccCCCC---CCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCCh
Q 037111 833 VSDFGTAKLLKPDS---SNWSELAGTYGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANM 908 (964)
Q Consensus 833 l~Dfg~a~~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~ 908 (964)
|+|||.++...... .......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||.....
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----------- 230 (320)
T 2i6l_A 162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE----------- 230 (320)
T ss_dssp ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----------
T ss_pred EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH-----------
Confidence 99999998765332 12234567899999998865 6789999999999999999999999864322
Q ss_pred hHHHHhhhcc------------------------CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 909 NEAIDHMFDA------------------------RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 909 ~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+....+... ..+.............++.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 231 LEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 1111111110 00000001111223466889999999999999999999975
No 270
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.4e-36 Score=333.51 Aligned_cols=250 Identities=20% Similarity=0.275 Sum_probs=173.3
Q ss_pred hhcccccc-eeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec----Cce
Q 037111 688 INNFDESF-CIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH----ARH 761 (964)
Q Consensus 688 ~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~ 761 (964)
.++|++.+ .||+|+||.||+|..+ +++.||||++... ..... +....++.++||||+++++++.. +..
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---PKARQ---EVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---HHHHH---HHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---HHHHH---HHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 46788854 6999999999999765 7899999998642 11111 22233566789999999999976 456
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC---CCceEEeccCc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF---EYEAHVSDFGT 838 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg~ 838 (964)
.++||||+++|+|.+++.......+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecccc
Confidence 89999999999999999877666799999999999999999999999 9999999999999986 45599999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA 918 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (964)
++...... .....+|+.|+|||.+.+..++.++||||||+++|+|++|+.||......... ......+...
T Consensus 178 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-------~~~~~~~~~~ 248 (336)
T 3fhr_A 178 AKETTQNA--LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS-------PGMKRRIRLG 248 (336)
T ss_dssp CEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------
T ss_pred ceeccccc--cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh-------hhHHHhhhcc
Confidence 98655332 23457899999999998888999999999999999999999998643321100 0001111111
Q ss_pred --CCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 919 --RLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 919 --~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
..+.+ ........+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 249 QYGFPNP----EWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp --CCCTT----TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccccCch----hhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111 11233456788999999999999999999986
No 271
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.3e-35 Score=335.09 Aligned_cols=200 Identities=22% Similarity=0.298 Sum_probs=171.3
Q ss_pred HhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CC-----ceeeEEeeeecC
Q 037111 687 SINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HR-----NIVKFYGFCSHA 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~ 759 (964)
..++|++.+.||+|+||+||+|..+ +++.||||+++. ......++..|+.+++.++ |+ +|+++++++...
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN---KKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec---cHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 3578999999999999999999765 678899999864 2233456777888877764 44 599999999999
Q ss_pred ceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC--CCCceEEeccC
Q 037111 760 RHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD--FEYEAHVSDFG 837 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~--~~~~~kl~Dfg 837 (964)
+..++||||+. |+|.+++.......+++..+..++.|++.||+|||++ +.+|+||||||+||+++ .++.+||+|||
T Consensus 129 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp TEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred CceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 99999999996 5999999877666799999999999999999999953 23899999999999995 47789999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 207 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 207 SSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp TCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred Cceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99876533 2345789999999999999999999999999999999999999864
No 272
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-35 Score=336.78 Aligned_cols=335 Identities=21% Similarity=0.218 Sum_probs=252.5
Q ss_pred CccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEE
Q 037111 225 YLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSL 304 (964)
Q Consensus 225 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 304 (964)
.+++++.|++++|.++...+..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..|..|+.+++|+.|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 35788889999998886655667888889999999998887777788888889999999888887777888888888888
Q ss_pred EeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeec
Q 037111 305 SVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFY 384 (964)
Q Consensus 305 ~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~ 384 (964)
++++|+++...+..+..+++|++|++++|.+.+..|..+.++++|+.|++++|++++.. +..+++|+.|++++|.+
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l- 198 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLL- 198 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCC-
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccc-
Confidence 88888888655554555666666666666665555555555555665555555555432 33344455555555444
Q ss_pred cccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhh
Q 037111 385 GELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELG 464 (964)
Q Consensus 385 ~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 464 (964)
++ +...++|++|++++|.+... |.. ..++|+.|+|++|.+++. ..+.
T Consensus 199 -----------------------~~-----~~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~ 245 (390)
T 3o6n_A 199 -----------------------ST-----LAIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLL 245 (390)
T ss_dssp -----------------------SE-----EECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGG
T ss_pred -----------------------cc-----cCCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHc
Confidence 32 12234678888888888744 332 247888889999888754 5788
Q ss_pred ccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhccccccccee
Q 037111 465 LLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKL 544 (964)
Q Consensus 465 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 544 (964)
.+++|++|+|++|.+++..|..|..+++|++|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|
T Consensus 246 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L 323 (390)
T 3o6n_A 246 NYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENL 323 (390)
T ss_dssp GCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEE
T ss_pred CCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEE
Confidence 88999999999999988888889999999999999999975 5666778899999999999998 677788899999999
Q ss_pred eccCCcCCCcccccccccccceEEEecCCcccccCCCCccCCCCCcccccCCCCccCC
Q 037111 545 NLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGE 602 (964)
Q Consensus 545 ~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~ 602 (964)
+|++|+|+.. + +..+++|+.|++++|++++.... ..++......+.+++..|+.
T Consensus 324 ~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 324 YLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp ECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCT
T ss_pred ECCCCcccee-C--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceecc
Confidence 9999999855 3 77789999999999999985322 23555666667788888865
No 273
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.3e-35 Score=355.25 Aligned_cols=335 Identities=21% Similarity=0.213 Sum_probs=233.2
Q ss_pred ccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEE
Q 037111 226 LRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLS 305 (964)
Q Consensus 226 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 305 (964)
+.+++.|++++|.++...+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|+++++|+.|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 34566666666666655555566666666666666666655555666666666666666666666566666666666666
Q ss_pred eeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeecc
Q 037111 306 VGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYG 385 (964)
Q Consensus 306 l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~ 385 (964)
|++|.+++..+..|..+++|++|++++|.+.+..|..+.++++|+.|++++|.+++.. +..+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc
Confidence 6666666554444455555555555555555555555566666666666666655542 3334555555555555432
Q ss_pred ccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhc
Q 037111 386 ELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGL 465 (964)
Q Consensus 386 ~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 465 (964)
. ...++|+.|++++|.+....+ .+ .++|+.|+|++|.+++ +..+..
T Consensus 207 l-----------------------------~~~~~L~~L~ls~n~l~~~~~-~~--~~~L~~L~L~~n~l~~--~~~l~~ 252 (597)
T 3oja_B 207 L-----------------------------AIPIAVEELDASHNSINVVRG-PV--NVELTILKLQHNNLTD--TAWLLN 252 (597)
T ss_dssp E-----------------------------ECCTTCSEEECCSSCCCEEEC-SC--CSCCCEEECCSSCCCC--CGGGGG
T ss_pred c-----------------------------cCCchhheeeccCCccccccc-cc--CCCCCEEECCCCCCCC--Chhhcc
Confidence 1 223457777777777764332 22 2578888888888875 367888
Q ss_pred cCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceee
Q 037111 466 LTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLN 545 (964)
Q Consensus 466 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 545 (964)
+++|+.|+|++|.+++..|..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 330 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEE
Confidence 8888888888888888888888888999999999999875 5666778899999999999998 6788888999999999
Q ss_pred ccCCcCCCcccccccccccceEEEecCCcccccCCCCccCCCCCcccccCCCCccCCC
Q 037111 546 LSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEAFRHAPVEALQGNKGLCGEV 603 (964)
Q Consensus 546 Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 603 (964)
|++|+|++.. +..+++|+.|++++|+|+|.... ..++.+....+.+++..|+.+
T Consensus 331 L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 331 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred CCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 9999998653 66788999999999999986432 346667777788999999864
No 274
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=6.7e-36 Score=330.41 Aligned_cols=255 Identities=24% Similarity=0.358 Sum_probs=178.7
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHH-HHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIK-ALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|+..+.||+|+||.||+|..+ +|+.||||++..... ......+..|+. +++.++||||+++++++.+.+..++||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD-EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC-HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC-chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 57999999999999999999764 788999999975432 333445556665 678889999999999999999999999
Q ss_pred EeccCCCHHHHhhh---cCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 767 EYLERGSLARILSS---ETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 767 e~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
||+++ +|.+++.. .....+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99986 88887753 23456899999999999999999999842 79999999999999999999999999998765
Q ss_pred CCCCCcccccccccccccccc----ccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccC
Q 037111 844 PDSSNWSELAGTYGYVAPELA----YTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDAR 919 (964)
Q Consensus 844 ~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (964)
.... .....|++.|+|||.+ .+..++.++||||||+++|||++|+.||....... +....+....
T Consensus 178 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----------~~~~~~~~~~ 246 (327)
T 3aln_A 178 DSIA-KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF----------DQLTQVVKGD 246 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------------CCCCCSC
T ss_pred cccc-cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH----------HHHHHHhcCC
Confidence 4322 2334689999999998 46678999999999999999999999986432210 1111111111
Q ss_pred CCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 920 LPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 920 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.+ .............+.+++.+||+.||++||+++++++
T Consensus 247 ~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 247 PP-QLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CC-CCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CC-CCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11 1001111223456888999999999999999999875
No 275
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=3.1e-35 Score=333.40 Aligned_cols=310 Identities=20% Similarity=0.200 Sum_probs=213.8
Q ss_pred cCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEE
Q 037111 82 LFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNL 160 (964)
Q Consensus 82 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L 160 (964)
.++++++|++++|.++...+..+..+++|++|+|++|.+++..|..++.+++|++|+|++|.+++.+|. ++.+++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 367888999999888754444578889999999999988876677888888888888888888887765 6788888888
Q ss_pred EcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccC
Q 037111 161 ALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240 (964)
Q Consensus 161 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 240 (964)
+|++|+++...+..|+++++|++|++++|++++..|..++++++|++|++++|++++. .++.+++|+.|++++|.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 8888888854444567888888888888888877777778888888888888887754 2455677777777777766
Q ss_pred CCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccc
Q 037111 241 GSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNIC 320 (964)
Q Consensus 241 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 320 (964)
+ +...++|+.|++++|.++.. |... .++|+.|++++|++++. ..+..+++|+.|++++|.+++..|.
T Consensus 200 ~-----~~~~~~L~~L~l~~n~l~~~-~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~--- 266 (390)
T 3o6n_A 200 T-----LAIPIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYH--- 266 (390)
T ss_dssp E-----EECCSSCSEEECCSSCCCEE-ECCC--CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESG---
T ss_pred c-----cCCCCcceEEECCCCeeeec-cccc--cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChh---
Confidence 3 22345677777777777643 3222 35667777777766642 4566666666666666666655444
Q ss_pred cCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceE
Q 037111 321 QSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGIL 400 (964)
Q Consensus 321 ~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L 400 (964)
.+..+++|+.|+|++|++++.. ..+..+++|+.|+|++|++... +..+..+++|+.|
T Consensus 267 ---------------------~~~~l~~L~~L~L~~n~l~~~~-~~~~~l~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L 323 (390)
T 3o6n_A 267 ---------------------PFVKMQRLERLYISNNRLVALN-LYGQPIPTLKVLDLSHNHLLHV-ERNQPQFDRLENL 323 (390)
T ss_dssp ---------------------GGTTCSSCCEEECCSSCCCEEE-CSSSCCTTCCEEECCSSCCCCC-GGGHHHHTTCSEE
T ss_pred ---------------------HccccccCCEEECCCCcCcccC-cccCCCCCCCEEECCCCcceec-CccccccCcCCEE
Confidence 4455555555555555555432 2334556666666666666532 3334556677777
Q ss_pred eecccccCCCCCCCCcccccCcEEeccCCcccc
Q 037111 401 KIAGNNITGGIPPEIGNATQLHELDFSSNHLVG 433 (964)
Q Consensus 401 ~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 433 (964)
++++|.|+.. .+..+++|++|++++|++..
T Consensus 324 ~L~~N~i~~~---~~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 324 YLDHNSIVTL---KLSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp ECCSSCCCCC---CCCTTCCCSEEECCSSCEEH
T ss_pred ECCCCcccee---CchhhccCCEEEcCCCCccc
Confidence 7777776644 25677889999999998874
No 276
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.1e-35 Score=325.10 Aligned_cols=253 Identities=21% Similarity=0.322 Sum_probs=183.8
Q ss_pred hhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.++|+..+.||+|+||.||+|+.+ +|+.||||++..........+.+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 568999999999999999999775 7899999999764444444445555666788899999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHH-ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
||+ ++.+..+... ....+++..+..++.|+++||+|||+ + +|+||||||+||+++.++.+||+|||++......
T Consensus 104 e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 104 ELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 999 4455555543 23458999999999999999999998 6 8999999999999999999999999999765543
Q ss_pred CCCccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCC
Q 037111 846 SSNWSELAGTYGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARL 920 (964)
Q Consensus 846 ~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (964)
.. .....|++.|+|||.+. ...++.++||||||+++|||++|+.||.... ...+....+.....
T Consensus 179 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----------~~~~~~~~~~~~~~ 247 (318)
T 2dyl_A 179 KA-KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK----------TDFEVLTKVLQEEP 247 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC----------SHHHHHHHHHHSCC
T ss_pred cc-ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC----------ccHHHHHHHhccCC
Confidence 22 23456899999999984 5568899999999999999999999985321 12233333333322
Q ss_pred CCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 921 PPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 921 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
+... ........+.+++.+||+.||++||+++++++
T Consensus 248 ~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 248 PLLP---GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CCCC---SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCC---ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 2110 01123355788899999999999999999875
No 277
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.1e-35 Score=340.75 Aligned_cols=249 Identities=24% Similarity=0.357 Sum_probs=186.2
Q ss_pred cccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEEEe
Q 037111 690 NFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 768 (964)
.|...+.||+|+||+||.+...+|+.||||++... ....+.+|+.+++++ +||||+++++++.+++..++||||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~ 90 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 90 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence 35556889999999998776668999999998632 234677899999875 899999999999999999999999
Q ss_pred ccCCCHHHHhhhcCCCCC-----CHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCC-------------Cc
Q 037111 769 LERGSLARILSSETATEM-----DWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFE-------------YE 830 (964)
Q Consensus 769 ~~~gsL~~~l~~~~~~~l-----~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~-------------~~ 830 (964)
+. |+|.+++........ ++..+..++.||+.||+|||++ +|+||||||+||+++.+ +.
T Consensus 91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~ 166 (434)
T 2rio_A 91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166 (434)
T ss_dssp CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceE
Confidence 96 599999976433211 2234578999999999999999 99999999999999754 48
Q ss_pred eEEeccCcccccCCCCCC----cccccccccccccccccc-------CCCCcchhHHHHHHHHHHHHh-CCCCCCccccc
Q 037111 831 AHVSDFGTAKLLKPDSSN----WSELAGTYGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSL 898 (964)
Q Consensus 831 ~kl~Dfg~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~-------~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~ 898 (964)
+||+|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.....
T Consensus 167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~- 245 (434)
T 2rio_A 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS- 245 (434)
T ss_dssp EEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT-
T ss_pred EEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh-
Confidence 999999999877654322 234579999999999875 668999999999999999999 8999853211
Q ss_pred cCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 899 SDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
............ +............++.+++.+||+.||++|||+.+|++
T Consensus 246 --------~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 246 --------RESNIIRGIFSL---DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp --------HHHHHHHTCCCC---CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --------hHHHHhcCCCCc---ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 011111111111 11111123456678899999999999999999999975
No 278
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.1e-35 Score=333.45 Aligned_cols=259 Identities=21% Similarity=0.262 Sum_probs=187.7
Q ss_pred HHHHHHhhcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCc
Q 037111 682 EEIIRSINNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHAR 760 (964)
Q Consensus 682 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 760 (964)
.+.....++|++.+.||+|+||.||+|+.. +|+.||||++..... ....+.+|+..++.++||||+++++++...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~ 92 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR---FRNRELQIMQDLAVLHHPNIVQLQSYFYTLG 92 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT---CCCHHHHHHHHHHHHCCTTBCCEEEEEEEEC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc---ccHHHHHHHHHHHhcCCCCcccHHHhhhccc
Confidence 455677889999999999999999999764 689999999864322 2234567788888889999999999996543
Q ss_pred e-------eEEEEEeccCCCHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHh--hCCCCCeEeccCCCCCeEECC-C
Q 037111 761 H-------SFLVYEYLERGSLARILSS--ETATEMDWSKRVNVIKGVAHALSYMH--HECRPPIVHRDVSSKNVLLDF-E 828 (964)
Q Consensus 761 ~-------~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~i~~~l~~LH--~~~~~~iiH~dlkp~Nill~~-~ 828 (964)
. .++||||+++ +|.+.+.. .....+++..+..++.|++.|++||| +. +|+||||||+||+++. +
T Consensus 93 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 93 ERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp SSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTT
T ss_pred cccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCC
Confidence 3 7899999986 55554432 34455889999999999999999999 77 9999999999999997 8
Q ss_pred CceEEeccCcccccCCCCCCccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCC
Q 037111 829 YEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGAN 907 (964)
Q Consensus 829 ~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~ 907 (964)
+.+||+|||+++....... .....||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.....
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~---------- 237 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSEP-NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS---------- 237 (360)
T ss_dssp TEEEECCCTTCBCCCTTSC-CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----------
T ss_pred CcEEEeeCCCceecCCCCC-cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh----------
Confidence 9999999999987654432 23457899999999987654 89999999999999999999999864221
Q ss_pred hhHHHHhhhccCCC-----------------------CCcc---ccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 908 MNEAIDHMFDARLP-----------------------PPWL---EVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 908 ~~~~~~~~~~~~~~-----------------------~~~~---~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......+...... .++. ..........+.+++.+||+.||++|||+.|+++
T Consensus 238 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 238 -AGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp -HHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -HHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 1111111110000 0000 0001113567889999999999999999999875
No 279
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.9e-35 Score=329.45 Aligned_cols=252 Identities=17% Similarity=0.292 Sum_probs=199.1
Q ss_pred hcccccceeecCCceeEEEEEeC-CC-CeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCc------eeeEEeeeecCc
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SG-DTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN------IVKFYGFCSHAR 760 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~ 760 (964)
++|++.+.||+|+||+||+|... ++ +.||+|+++. .......+.+|+.++++++|++ ++.+++++...+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc---cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 57999999999999999999764 44 6899999864 2334567788999988887655 999999999999
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEE---------------
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLL--------------- 825 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill--------------- 825 (964)
..++||||+ ++++.+++.......+++..+..++.||+.||+|||++ +|+||||||+||++
T Consensus 96 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccc
Confidence 999999999 66888888776666799999999999999999999999 99999999999999
Q ss_pred ----CCCCceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCC
Q 037111 826 ----DFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDS 901 (964)
Q Consensus 826 ----~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~ 901 (964)
+.++.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||.......
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-- 246 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE-- 246 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--
T ss_pred cccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--
Confidence 56789999999999865433 234578999999999999999999999999999999999999986432210
Q ss_pred CCCCCChhHHHHhhhccCCC------------------------------------CCccccchHHHHHHHHHHHHHccC
Q 037111 902 SLPGANMNEAIDHMFDARLP------------------------------------PPWLEVGVEDKLKSIIEVALSCVD 945 (964)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~l~~li~~cl~ 945 (964)
....+..... ..+ ..............+.+++.+||+
T Consensus 247 ------~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 319 (355)
T 2eu9_A 247 ------HLVMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLE 319 (355)
T ss_dssp ------HHHHHHHHHC-CCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC
T ss_pred ------HHHHHHHHcC-CCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhc
Confidence 0000111100 000 000001122345678899999999
Q ss_pred CCCCCCCCHHHHHH
Q 037111 946 ANPERRPNMQIVCK 959 (964)
Q Consensus 946 ~dp~~RPs~~evl~ 959 (964)
.||++|||++|+++
T Consensus 320 ~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 320 FDPAQRITLAEALL 333 (355)
T ss_dssp SSTTTSCCHHHHTT
T ss_pred CChhhCcCHHHHhc
Confidence 99999999999974
No 280
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.6e-35 Score=333.98 Aligned_cols=257 Identities=21% Similarity=0.329 Sum_probs=199.0
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-----------CCceeeEEeee
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-----------HRNIVKFYGFC 756 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~ 756 (964)
++|++.+.||+|+||+||+|+. .+++.||||++.. .......+.+|+.++++++ ||||+++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC---CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 5799999999999999999975 5788999999863 2334567788999888775 89999999999
Q ss_pred ecCc----eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC------
Q 037111 757 SHAR----HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD------ 826 (964)
Q Consensus 757 ~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~------ 826 (964)
...+ ..++||||+ +++|.+++.......+++..+..++.||+.||+|||+++ +|+||||||+||+++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTT
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCc
Confidence 8654 789999999 889999998766667999999999999999999999843 899999999999994
Q ss_pred CCCceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCC
Q 037111 827 FEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGA 906 (964)
Q Consensus 827 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~ 906 (964)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-----~ 244 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSY-----T 244 (373)
T ss_dssp TEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--------------
T ss_pred CcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCccccc-----C
Confidence 4458999999999876533 2345789999999999999999999999999999999999999874332110 0
Q ss_pred ChhHHHHhhhc--cCCCCC--------------------------c--------cccchHHHHHHHHHHHHHccCCCCCC
Q 037111 907 NMNEAIDHMFD--ARLPPP--------------------------W--------LEVGVEDKLKSIIEVALSCVDANPER 950 (964)
Q Consensus 907 ~~~~~~~~~~~--~~~~~~--------------------------~--------~~~~~~~~~~~l~~li~~cl~~dp~~ 950 (964)
.....+..+.. +..+.. + ...........+.+++.+||+.||++
T Consensus 245 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 324 (373)
T 1q8y_A 245 KDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRK 324 (373)
T ss_dssp CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTT
T ss_pred ChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccc
Confidence 01111111110 000000 0 00112456778999999999999999
Q ss_pred CCCHHHHHH
Q 037111 951 RPNMQIVCK 959 (964)
Q Consensus 951 RPs~~evl~ 959 (964)
|||++|+++
T Consensus 325 Rpt~~ell~ 333 (373)
T 1q8y_A 325 RADAGGLVN 333 (373)
T ss_dssp CBCHHHHHT
T ss_pred cCCHHHHhh
Confidence 999999986
No 281
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.3e-36 Score=331.39 Aligned_cols=242 Identities=21% Similarity=0.325 Sum_probs=197.2
Q ss_pred hhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCch----hhHHHHHHHHHHHhCCC--CCceeeEEeeeecCc
Q 037111 688 INNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGET----THQKEFLSEIKALTGVR--HRNIVKFYGFCSHAR 760 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~ 760 (964)
.++|++.+.||+|+||.||+|.. .+++.||||++....... .....+.+|+.++++++ ||||+++++++.+.+
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 46799999999999999999965 478899999987543221 12245667999998886 699999999999999
Q ss_pred eeEEEEEeccC-CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC-CCCceEEeccCc
Q 037111 761 HSFLVYEYLER-GSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD-FEYEAHVSDFGT 838 (964)
Q Consensus 761 ~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~-~~~~~kl~Dfg~ 838 (964)
..++|||++.+ ++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++ .++.+||+|||+
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred cEEEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 99999999986 89999997643 488999999999999999999999 999999999999999 789999999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 839 AKLLKPDSSNWSELAGTYGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 839 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
++..... ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||.... +.. .
T Consensus 197 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------------~~~----~ 257 (320)
T 3a99_A 197 GALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------------EII----R 257 (320)
T ss_dssp CEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------------HHH----H
T ss_pred ccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------------hhh----c
Confidence 9876543 2334578999999999887766 678999999999999999999985321 111 1
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+ .....++.+++.+||+.||++|||++++++
T Consensus 258 ~~~~~~------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 258 GQVFFR------QRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp CCCCCS------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cccccc------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111 112345788899999999999999999986
No 282
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.4e-36 Score=327.30 Aligned_cols=245 Identities=21% Similarity=0.335 Sum_probs=190.0
Q ss_pred HHHhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCch----hhHHHHHHHHHHHhCC----CCCceeeEEee
Q 037111 685 IRSINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGET----THQKEFLSEIKALTGV----RHRNIVKFYGF 755 (964)
Q Consensus 685 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~E~~~l~~l----~h~niv~l~~~ 755 (964)
....++|++.+.||+|+||.||+|+. .+++.||||++....... .....+.+|+.+++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34457899999999999999999976 468899999986432211 1223455788888877 89999999999
Q ss_pred eecCceeEEEEEe-ccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEEC-CCCceEE
Q 037111 756 CSHARHSFLVYEY-LERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLD-FEYEAHV 833 (964)
Q Consensus 756 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~-~~~~~kl 833 (964)
+...+..++|||| +.+++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++ .++.+||
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEE
Confidence 9999999999999 78999999997643 489999999999999999999999 999999999999999 8899999
Q ss_pred eccCcccccCCCCCCccccccccccccccccccCCCC-cchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHH
Q 037111 834 SDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAI 912 (964)
Q Consensus 834 ~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 912 (964)
+|||++....... .....|++.|+|||.+.+..+. .++||||+|+++|||++|+.||.... +..
T Consensus 182 ~dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------------~~~ 246 (312)
T 2iwi_A 182 IDFGSGALLHDEP--YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------------EIL 246 (312)
T ss_dssp CCCSSCEECCSSC--BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------------HHH
T ss_pred EEcchhhhcccCc--ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------------HHh
Confidence 9999998765432 3355689999999998877664 58999999999999999999985321 111
Q ss_pred HhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 913 DHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
. .....+ ......+.+++.+||+.||++||+++|+++
T Consensus 247 ~----~~~~~~------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 247 E----AELHFP------AHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp H----TCCCCC------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred h----hccCCc------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 111111 122345788899999999999999999987
No 283
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=2.5e-36 Score=332.66 Aligned_cols=282 Identities=21% Similarity=0.238 Sum_probs=209.6
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCccee
Q 037111 8 NSIEAARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLS 87 (964)
Q Consensus 8 ~~~~~~~all~~k~~~~~~~~~~l~sW~~~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~ 87 (964)
+-.++++||++||+++..|+.+.+++|..... ...++|.|.|+.|+.... .++....+.++
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~---~~~~~~~~~g~~~~~~~~----------------~l~~~~~~~l~ 84 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANS---NNPQIETRTGRALKATAD----------------LLEDATQPGRV 84 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTT---TCTTSCCSHHHHHHHHHH----------------HHHHHTSTTCC
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhccccc---ccccccccCCcchhhhHH----------------HHhccccccee
Confidence 33468899999999998888888889942110 136789999999963110 00112245678
Q ss_pred EEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCC
Q 037111 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHL 167 (964)
Q Consensus 88 ~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l 167 (964)
.|+|++|+++ .+|+.++++++|++|+|++|.++ .+|..++.+++|++|+|++|.++..++.++.+++|++|+|++|++
T Consensus 85 ~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~ 162 (328)
T 4fcg_A 85 ALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPE 162 (328)
T ss_dssp EEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETT
T ss_pred EEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCC
Confidence 8888888887 67888888999999999999988 888888888888888888888885545688888888888888888
Q ss_pred CCCCCCCCCC---------CCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccc
Q 037111 168 DGPIPVSIGN---------LSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ 238 (964)
Q Consensus 168 ~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 238 (964)
.+.+|..++. +++|++|+|++|+++ .+|..++++++|++|+|++|++++ +|..++.+++|++|+|++|.
T Consensus 163 ~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~ 240 (328)
T 4fcg_A 163 LTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCT 240 (328)
T ss_dssp CCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCT
T ss_pred ccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCc
Confidence 8888877664 777777777777777 667777777777777777777774 44457777777777777777
Q ss_pred cCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCc
Q 037111 239 LSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFT 312 (964)
Q Consensus 239 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 312 (964)
+.+.+|..++.+++|++|+|++|++.+.+|..+..+++|++|+|++|++.+.+|..++.+++|+.+++..|.+.
T Consensus 241 ~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 241 ALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred chhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 77777777777777777777777777677777777777777777777777777777777777777777666554
No 284
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=5e-35 Score=334.16 Aligned_cols=247 Identities=22% Similarity=0.304 Sum_probs=185.0
Q ss_pred hcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 767 (964)
.+|+..+.||+|+||+||.....+++.||||++..... ..+.+|+.+++++ +||||+++++++.+....|+|||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 46888999999999997665556799999999864221 2345799999988 79999999999999999999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC-----CCceEEeccCccccc
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF-----EYEAHVSDFGTAKLL 842 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~-----~~~~kl~Dfg~a~~~ 842 (964)
|+. |+|.+++..... ...+..+..++.||+.||+|||++ +|+||||||+||+++. ...+||+|||+|+..
T Consensus 99 ~~~-g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~ 173 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173 (432)
T ss_dssp CCS-EEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred CCC-CCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence 996 599999976543 244456678999999999999999 9999999999999953 235889999999876
Q ss_pred CCCC---CCccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHh-CCCCCCccccccCCCCCCCChhHHHHhh
Q 037111 843 KPDS---SNWSELAGTYGYVAPELAY---TMKVTEKCDVYSFGVLALEVIK-GQHPKDLLSSLSDSSLPGANMNEAIDHM 915 (964)
Q Consensus 843 ~~~~---~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwSlGvll~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 915 (964)
.... .......||+.|+|||++. ...++.++||||+||++|||++ |..||..... ......
T Consensus 174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~------------~~~~~~ 241 (432)
T 3p23_A 174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ------------RQANIL 241 (432)
T ss_dssp ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT------------HHHHHH
T ss_pred cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH------------HHHHHH
Confidence 5432 2234567999999999997 4567889999999999999999 8888742111 111111
Q ss_pred hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 916 FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
......... .........+.+++.+||+.||++|||+++|++
T Consensus 242 ~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 242 LGACSLDCL--HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TTCCCCTTS--CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccCCcccc--CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 111111110 011233455778999999999999999999984
No 285
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.3e-35 Score=348.40 Aligned_cols=264 Identities=23% Similarity=0.282 Sum_probs=198.3
Q ss_pred HhhcccccceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeec------C
Q 037111 687 SINNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSH------A 759 (964)
Q Consensus 687 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~ 759 (964)
..++|++.+.||+|+||.||+|.. .+|+.||||++... ........+.+|+.++++++||||+++++++.. .
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 457899999999999999999976 46899999998653 344456778999999999999999999999765 6
Q ss_pred ceeEEEEEeccCCCHHHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCc---eEEec
Q 037111 760 RHSFLVYEYLERGSLARILSSET-ATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYE---AHVSD 835 (964)
Q Consensus 760 ~~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~---~kl~D 835 (964)
+..++||||+++|+|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +||+|
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcc
Confidence 77899999999999999997643 33588899999999999999999999 9999999999999997765 99999
Q ss_pred cCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCC---CChhHHH
Q 037111 836 FGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPG---ANMNEAI 912 (964)
Q Consensus 836 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~---~~~~~~~ 912 (964)
||.+....... ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||............. .......
T Consensus 168 FG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 168 LGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV 246 (676)
T ss_dssp CCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCS
T ss_pred ccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhh
Confidence 99998765443 2345678999999999999999999999999999999999999986432111000000 0000000
Q ss_pred Hhh------hccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 037111 913 DHM------FDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIV 957 (964)
Q Consensus 913 ~~~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~ev 957 (964)
... +....+. ...........+.+++.+||.+||++|||++++
T Consensus 247 ~~~l~g~~~~~~~lp~--p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPT--PNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCCCSSSCCCCSSSCC--SCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhccccccccccCC--chhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 000 1111111 112234466778899999999999999999663
No 286
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.4e-34 Score=310.44 Aligned_cols=229 Identities=12% Similarity=0.069 Sum_probs=181.8
Q ss_pred hcccccceeecCCceeEEEEEeC-CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEEE
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 766 (964)
++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+.+|+..+++++||||+++++++.+++..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999765 588999999975433 2444578999999999999999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||++|++|.+++... ....++.+++.|++.||+|||++ +|+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred EecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc---------
Confidence 999999999999532 35567888999999999999999 99999999999999999999998543
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccc
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLE 926 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 926 (964)
|++ .++.++|||||||++|||+||+.||............. .......++ ..
T Consensus 175 -----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~--------~~~~~~~~~--~~ 226 (286)
T 3uqc_A 175 -----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE--------RDTAGQPIE--PA 226 (286)
T ss_dssp -----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC--------BCTTSCBCC--HH
T ss_pred -----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH--------HHhccCCCC--hh
Confidence 333 36889999999999999999999997544321110000 000011110 01
Q ss_pred cchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhc
Q 037111 927 VGVEDKLKSIIEVALSCVDANPERRPNMQIVCKLLS 962 (964)
Q Consensus 927 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~~L~ 962 (964)
......+..+.+++.+||+.||++| |+.|+++.|+
T Consensus 227 ~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~ 261 (286)
T 3uqc_A 227 DIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQ 261 (286)
T ss_dssp HHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHH
T ss_pred hcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHH
Confidence 1112334568889999999999999 9999999985
No 287
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=6.9e-34 Score=317.10 Aligned_cols=307 Identities=26% Similarity=0.358 Sum_probs=170.0
Q ss_pred ccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCcccc
Q 037111 223 FGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLN 302 (964)
Q Consensus 223 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 302 (964)
+..+++|++|++++|.+.. +| .+..+++|++|++++|++++. +. +..+++|++|++++|++++ + ..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCS
T ss_pred chhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCC
Confidence 3455666666666666653 33 356666666666666666632 22 6666666666666666653 2 2466666666
Q ss_pred EEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCe
Q 037111 303 SLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNK 382 (964)
Q Consensus 303 ~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 382 (964)
+|++++|.+++..+ +..+++|++|++++|.....++ .+..+++|+.|++++|.+.+..+ +..+++|+.|++++|+
T Consensus 114 ~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~ 188 (347)
T 4fmz_A 114 ELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQ 188 (347)
T ss_dssp EEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSC
T ss_pred EEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCc
Confidence 66666666664422 4445555555555554333322 25555666666666666554433 4555555555555555
Q ss_pred eccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchh
Q 037111 383 FYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPE 462 (964)
Q Consensus 383 i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 462 (964)
+.+..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|.+++..+
T Consensus 189 l~~~~~--------------------------~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-- 238 (347)
T 4fmz_A 189 IEDISP--------------------------LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-- 238 (347)
T ss_dssp CCCCGG--------------------------GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--
T ss_pred cccccc--------------------------ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--
Confidence 543322 4444555555555555543322 4455555555555555553322
Q ss_pred hhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccc
Q 037111 463 LGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLE 542 (964)
Q Consensus 463 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 542 (964)
+..+++|++|++++|.+++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|++++..|..+.++++|+
T Consensus 239 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 314 (347)
T 4fmz_A 239 LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCS
T ss_pred hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCC
Confidence 55555555555555555432 2355556666666666666543 2355666666666666666655556666666666
Q ss_pred eeeccCCcCCCcccccccccccceEEEecCCccc
Q 037111 543 KLNLSHNNLSGSIPTNFENMHGLLSIDISYNELD 576 (964)
Q Consensus 543 ~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~ 576 (964)
.|+|++|++++..| +..+++|+.||+++|+++
T Consensus 315 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 315 TLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 66666666665544 556666666666666653
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.1e-33 Score=315.39 Aligned_cols=306 Identities=24% Similarity=0.376 Sum_probs=153.9
Q ss_pred CcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEE
Q 037111 81 SLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNL 160 (964)
Q Consensus 81 ~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L 160 (964)
..+++|+.|++++|.++. +| .+..+++|++|+|++|.+++ +|. +..+++|++|++++|.+++ ++.+..+++|++|
T Consensus 41 ~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~~~~~~l~~L~~L 115 (347)
T 4fmz_A 41 EELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-ISALQNLTNLREL 115 (347)
T ss_dssp HHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGGGTTCTTCSEE
T ss_pred hhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-chHHcCCCcCCEE
Confidence 345566666666666653 33 36666666666666666663 333 5666666666666666654 2445566666666
Q ss_pred EcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccC
Q 037111 161 ALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240 (964)
Q Consensus 161 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 240 (964)
++++|.+++.. . +..+++|++|++++|.....++ .+..+++|++|++++|.+++..+ +..+++|++|++++|.++
T Consensus 116 ~l~~n~i~~~~-~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~ 190 (347)
T 4fmz_A 116 YLNEDNISDIS-P-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIE 190 (347)
T ss_dssp ECTTSCCCCCG-G-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCC
T ss_pred ECcCCcccCch-h-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccc
Confidence 66666665432 2 5556666666666664443322 35555555555555555554322 445555555555555555
Q ss_pred CCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccc
Q 037111 241 GSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNIC 320 (964)
Q Consensus 241 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 320 (964)
+..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|.+++.
T Consensus 191 ~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~------ 258 (347)
T 4fmz_A 191 DISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI------ 258 (347)
T ss_dssp CCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC------
T ss_pred cccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC------
Confidence 3222 4455555555555555543222 4444555555555555443221 44444444444444444321
Q ss_pred cCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceE
Q 037111 321 QSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGIL 400 (964)
Q Consensus 321 ~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L 400 (964)
..+..+++|+.|++++|.+++. ..+..+++|+.|++++|+
T Consensus 259 --------------------~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~------------------ 298 (347)
T 4fmz_A 259 --------------------NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQ------------------ 298 (347)
T ss_dssp --------------------GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSC------------------
T ss_pred --------------------hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCc------------------
Confidence 1233344444444444444432 223334444444444444
Q ss_pred eecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeeccccccc
Q 037111 401 KIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLS 456 (964)
Q Consensus 401 ~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 456 (964)
+++..+..+..+++|++|++++|++++..| +..+++|++|++++|.|+
T Consensus 299 ------l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 299 ------LGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp ------CCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ------CCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 443444444455555555555555554433 555556666666665553
No 289
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=9.3e-34 Score=308.82 Aligned_cols=231 Identities=19% Similarity=0.277 Sum_probs=180.1
Q ss_pred hhccccc-ceeecCCceeEEEEEe-CCCCeEEEEEeccccCchhhHHHHHHHHHHH-hCCCCCceeeEEeeeec----Cc
Q 037111 688 INNFDES-FCIGRGGYGSVYKAEL-PSGDTVAVKKLHSFTGETTHQKEFLSEIKAL-TGVRHRNIVKFYGFCSH----AR 760 (964)
Q Consensus 688 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~ 760 (964)
.++|.+. +.||+|+||.||+|.. .+++.||+|++.. ...+.+|+.++ +..+||||+++++++.. ..
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 88 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK 88 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence 4567777 7899999999999976 4789999999863 13566788887 66689999999999977 67
Q ss_pred eeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC---CCceEEeccC
Q 037111 761 HSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF---EYEAHVSDFG 837 (964)
Q Consensus 761 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~---~~~~kl~Dfg 837 (964)
..++||||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred eEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 899999999999999999887666799999999999999999999999 9999999999999998 7889999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhc
Q 037111 838 TAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFD 917 (964)
Q Consensus 838 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (964)
++.... +..++.++||||+||++|||++|+.||............ ...+..
T Consensus 166 ~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~-------~~~~~~ 216 (299)
T 3m2w_A 166 FAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM-------KTRIRM 216 (299)
T ss_dssp TCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCS-------CCSSCT
T ss_pred cccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHH-------HHHHhh
Confidence 986432 234678999999999999999999998643321110000 000001
Q ss_pred cCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 918 ARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
.....+ ..........+.+++.+||+.||++|||++|+++
T Consensus 217 ~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 217 GQYEFP--NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp TCCSSC--HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCC--chhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 111111 0111233456888999999999999999999986
No 290
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.9e-34 Score=313.32 Aligned_cols=254 Identities=26% Similarity=0.442 Sum_probs=206.4
Q ss_pred CCeeecCCCcccc--ccCcccCCCCCCcEEEccC-CeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEe
Q 037111 349 LERVRLEKNQLIG--NISDDFGIYPNLKLFDLSY-NKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELD 425 (964)
Q Consensus 349 L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~-N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 425 (964)
++.|+|++|.+++ ..+..|..+++|+.|+|++ |.+.+..+..+..+++|++|+|++|.+++.+|..|.++++|++|+
T Consensus 52 l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 131 (313)
T 1ogq_A 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLD 131 (313)
T ss_dssp EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEE
T ss_pred EEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEe
Confidence 4444444444444 3444444555555555553 555555555556666666666666666666777788888888888
Q ss_pred ccCCcccccCCccccccCCcceeecccccccCCCchhhhccC-CCCceecccCccccccCCCcccccccceecCCccccC
Q 037111 426 FSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLT-DLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFS 504 (964)
Q Consensus 426 Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 504 (964)
|++|++++.+|..+..+++|++|+|++|.+++.+|..+..++ +|++|+|++|++++.+|..+..+. |++|++++|+++
T Consensus 132 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~ 210 (313)
T 1ogq_A 132 FSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLE 210 (313)
T ss_dssp CCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEE
T ss_pred CCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCccc
Confidence 888888888888888888899999999988888888888887 899999999999888888888887 999999999999
Q ss_pred ccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCCCcc
Q 037111 505 QEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIEA 584 (964)
Q Consensus 505 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~~ 584 (964)
+..|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|+|++.+|..|..+++|+.|++++|+++|.+|....
T Consensus 211 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~ 289 (313)
T 1ogq_A 211 GDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGN 289 (313)
T ss_dssp ECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTT
T ss_pred CcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCcc
Confidence 88899999999999999999999866655 88899999999999999999999999999999999999999999999888
Q ss_pred CCCCCcccccCCCCccCCCC
Q 037111 585 FRHAPVEALQGNKGLCGEVS 604 (964)
Q Consensus 585 ~~~~~~~~~~~n~~~c~~~~ 604 (964)
++.+....+.+|+++||.+.
T Consensus 290 l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 290 LQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp GGGSCGGGTCSSSEEESTTS
T ss_pred ccccChHHhcCCCCccCCCC
Confidence 88888999999999999754
No 291
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.2e-34 Score=346.74 Aligned_cols=236 Identities=25% Similarity=0.364 Sum_probs=190.7
Q ss_pred hcccccceeecCCceeEEEEEeC--CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeeecCce-----
Q 037111 689 NNFDESFCIGRGGYGSVYKAELP--SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARH----- 761 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 761 (964)
++|++.+.||+|+||.||+|... +++.||||++... ........+.+|+.++++++||||+++++++...+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc-CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 57999999999999999999765 5889999998642 334455678999999999999999999999987655
Q ss_pred eEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 762 SFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 762 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
.|+||||++|++|.+++.. .+++..++.++.||+.||+|||++ +||||||||+||+++.+ .+||+|||+++.
T Consensus 159 ~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchh
Confidence 7999999999999988743 589999999999999999999999 99999999999999875 899999999987
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCC
Q 037111 842 LKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLP 921 (964)
Q Consensus 842 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (964)
.... ....||+.|+|||++.+. ++.++|||||||++|+|++|..||...... .++
T Consensus 231 ~~~~----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~--------------------~~~ 285 (681)
T 2pzi_A 231 INSF----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD--------------------GLP 285 (681)
T ss_dssp TTCC----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS--------------------SCC
T ss_pred cccC----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc--------------------ccc
Confidence 6543 345799999999998765 489999999999999999998886531110 001
Q ss_pred CCccccchHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHh
Q 037111 922 PPWLEVGVEDKLKSIIEVALSCVDANPERRPN-MQIVCKLL 961 (964)
Q Consensus 922 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs-~~evl~~L 961 (964)
.. .........+.+++.+||++||++||+ ++++...|
T Consensus 286 ~~---~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l 323 (681)
T 2pzi_A 286 ED---DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQL 323 (681)
T ss_dssp TT---CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred cc---ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHH
Confidence 00 011223456888999999999999996 55555444
No 292
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=6e-33 Score=307.18 Aligned_cols=281 Identities=24% Similarity=0.285 Sum_probs=227.5
Q ss_pred CCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCC
Q 037111 77 QFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSS 156 (964)
Q Consensus 77 ~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~ 156 (964)
.+|...+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..++.+++|++|++++|.++..++.+. ++
T Consensus 47 ~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~--~~ 124 (332)
T 2ft3_A 47 AVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP--SS 124 (332)
T ss_dssp SCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSCCSSCC--TT
T ss_pred ccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCccCcccc--cc
Confidence 3455556899999999999998888899999999999999999998889999999999999999999996665554 89
Q ss_pred CCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCC--CCCCccccCCCCcchhhcccccccCCccccccCccccceeec
Q 037111 157 LKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLP--GSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLEL 234 (964)
Q Consensus 157 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 234 (964)
|++|++++|++++..+..++++++|++|++++|.++ +..|..+..+ +|++|++++|++++ +|..+. ++|++|++
T Consensus 125 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l 200 (332)
T 2ft3_A 125 LVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHL 200 (332)
T ss_dssp CCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBC
T ss_pred CCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEEC
Confidence 999999999999777777999999999999999996 4678888888 99999999999996 455443 78999999
Q ss_pred cccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCccc
Q 037111 235 SNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGF 314 (964)
Q Consensus 235 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 314 (964)
++|++++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|++++.
T Consensus 201 ~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~ 279 (332)
T 2ft3_A 201 DHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKV 279 (332)
T ss_dssp CSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBC
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCcc
Confidence 999999888888999999999999999999877778889999999999999998 7888888999999999999999887
Q ss_pred CCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccc--cccCcccCCCCCCcEEEccCCe
Q 037111 315 LPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLI--GNISDDFGIYPNLKLFDLSYNK 382 (964)
Q Consensus 315 ~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N~ 382 (964)
.+..++... ......+|+.|++++|++. +..+..|..+++|+.+++++|+
T Consensus 280 ~~~~~~~~~------------------~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 280 GVNDFCPVG------------------FGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTSSSCSS------------------CCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ChhHccccc------------------cccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 776665421 0011244556666666655 4455556666666666666653
No 293
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=7.2e-34 Score=323.60 Aligned_cols=242 Identities=15% Similarity=0.155 Sum_probs=179.1
Q ss_pred hcccccceeecCCceeEEEEEe-CCCCeEEEEEeccc-cCchhhHHHHHHHHHHHhCCCC-Cceee--------------
Q 037111 689 NNFDESFCIGRGGYGSVYKAEL-PSGDTVAVKKLHSF-TGETTHQKEFLSEIKALTGVRH-RNIVK-------------- 751 (964)
Q Consensus 689 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~~~E~~~l~~l~h-~niv~-------------- 751 (964)
..|...+.||+|+||+||+|++ .+|+.||||++... .......+.+.+|+.+++.++| ++...
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 4578889999999999999974 57999999998732 2222335678999999999977 32111
Q ss_pred -------EEeeeec-----CceeEEEEEeccCCCHHHHhh-----hcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeE
Q 037111 752 -------FYGFCSH-----ARHSFLVYEYLERGSLARILS-----SETATEMDWSKRVNVIKGVAHALSYMHHECRPPIV 814 (964)
Q Consensus 752 -------l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ii 814 (964)
+..++.. ....+++|+++ +++|.+++. ......+++..+..++.||++||+|||++ +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 1111111 12457777776 569999985 22334477889999999999999999999 999
Q ss_pred eccCCCCCeEECCCCceEEeccCcccccCCCCCCcccccccccccccccc----------ccCCCCcchhHHHHHHHHHH
Q 037111 815 HRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELA----------YTMKVTEKCDVYSFGVLALE 884 (964)
Q Consensus 815 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~sDvwSlGvll~e 884 (964)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999998765433 334567 999999999 55668899999999999999
Q ss_pred HHhCCCCCCccccccCCCCCCCChhHHHHhhhccCCCCCccccchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 037111 885 VIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDARLPPPWLEVGVEDKLKSIIEVALSCVDANPERRPNMQIVCK 959 (964)
Q Consensus 885 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~evl~ 959 (964)
|++|+.||....... ....++.... ..+..+.+++.+||+.||++||++.++++
T Consensus 310 lltg~~Pf~~~~~~~-----------~~~~~~~~~~----------~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 310 IWCADLPNTDDAALG-----------GSEWIFRSCK----------NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHSSCCCCTTGGGS-----------CSGGGGSSCC----------CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHCCCCCCCcchhh-----------hHHHHHhhcc----------cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999986433211 1111111111 12255888999999999999999877753
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=8.1e-33 Score=305.97 Aligned_cols=298 Identities=22% Similarity=0.294 Sum_probs=237.1
Q ss_pred CCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCC
Q 037111 46 TPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIP 125 (964)
Q Consensus 46 ~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p 125 (964)
..|.|..+.|+. +++ ..+|....+.+++|+|++|++++..+..|+++++|++|+|++|.+++..|
T Consensus 29 c~c~l~~l~~~~-----------~~l----~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 93 (330)
T 1xku_A 29 CQCHLRVVQCSD-----------LGL----EKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISP 93 (330)
T ss_dssp CEEETTEEECTT-----------SCC----CSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCT
T ss_pred CcCCCeEEEecC-----------CCc----cccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCH
Confidence 346777777753 222 23455556899999999999998777799999999999999999998889
Q ss_pred cccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCC--CCCccccCCC
Q 037111 126 SEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPG--SIPSSIGNLS 203 (964)
Q Consensus 126 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~ 203 (964)
..++.+++|++|++++|.++..+..+. ++|++|++++|++++..+..++++++|++|++++|.++. ..+..+.+++
T Consensus 94 ~~~~~l~~L~~L~Ls~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~ 171 (330)
T 1xku_A 94 GAFAPLVKLERLYLSKNQLKELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMK 171 (330)
T ss_dssp TTTTTCTTCCEEECCSSCCSBCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCT
T ss_pred HHhcCCCCCCEEECCCCcCCccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCC
Confidence 999999999999999999986555444 799999999999998777789999999999999999963 6778889999
Q ss_pred CcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecc
Q 037111 204 NLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLY 283 (964)
Q Consensus 204 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 283 (964)
+|++|++++|+++. +|..+. ++|++|++++|++++..|..+..+++|++|+|++|++++..+..+..+++|++|+|+
T Consensus 172 ~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 248 (330)
T 1xku_A 172 KLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLN 248 (330)
T ss_dssp TCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECC
T ss_pred CcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECC
Confidence 99999999999985 454443 789999999999998888889999999999999999998777788889999999999
Q ss_pred cccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCcccc--
Q 037111 284 DNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIG-- 361 (964)
Q Consensus 284 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-- 361 (964)
+|+++ .+|..+..+++|+.|++++|+|++..+..|+... ......+|+.|++++|++..
T Consensus 249 ~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~------------------~~~~~~~l~~l~l~~N~~~~~~ 309 (330)
T 1xku_A 249 NNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG------------------YNTKKASYSGVSLFSNPVQYWE 309 (330)
T ss_dssp SSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS------------------CCTTSCCCSEEECCSSSSCGGG
T ss_pred CCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcc------------------cccccccccceEeecCcccccc
Confidence 99998 7788888899999999999999887776665331 01123456666666666643
Q ss_pred ccCcccCCCCCCcEEEccCCe
Q 037111 362 NISDDFGIYPNLKLFDLSYNK 382 (964)
Q Consensus 362 ~~~~~~~~l~~L~~L~Ls~N~ 382 (964)
+.+..|..+.+++.++|++|+
T Consensus 310 i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 310 IQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SCGGGGTTCCCGGGEEC----
T ss_pred cCccccccccceeEEEecccC
Confidence 445566666677777777664
No 295
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.1e-32 Score=302.78 Aligned_cols=287 Identities=23% Similarity=0.287 Sum_probs=220.7
Q ss_pred ceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcC
Q 037111 85 HLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALD 163 (964)
Q Consensus 85 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~ 163 (964)
+++.++++++.++ .+|..+. ++|++|+|++|.+++..|..++.+++|++|++++|.+++..|. ++.+++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 5667778888887 5777663 6899999999999877777889999999999999998887664 8888899999999
Q ss_pred CCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhccccccc--CCccccccCccccceeeccccccCC
Q 037111 164 GNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLR--GPIPSSFGYLRKLTKLELSNNQLSG 241 (964)
Q Consensus 164 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~ 241 (964)
+|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++ +..+..|..+ +|++|++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 99888 5666655 78888888888888666667888888888888888886 3667777777 88888888888874
Q ss_pred CChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCccccc
Q 037111 242 SIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQ 321 (964)
Q Consensus 242 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 321 (964)
+|..+. ++|++|++++|++++..+..+..+++|++|+|++|++++..+..+..+++|+.|++++|+++ .
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~------- 255 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-R------- 255 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-B-------
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-e-------
Confidence 454443 67888888888887766677777888888888888887766667777777777777777776 2
Q ss_pred CCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCC------CCCCcEEEccCCeec--cccCccccC
Q 037111 322 SGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGI------YPNLKLFDLSYNKFY--GELSSNWWN 393 (964)
Q Consensus 322 ~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~------l~~L~~L~Ls~N~i~--~~~~~~~~~ 393 (964)
+|..+..+++|+.|++++|++++.....|.. .+.|+.|++++|++. +..+..|..
T Consensus 256 -----------------lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~ 318 (332)
T 2ft3_A 256 -----------------VPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRC 318 (332)
T ss_dssp -----------------CCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTT
T ss_pred -----------------cChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccc
Confidence 3444556666777777777776666666543 467999999999997 667788999
Q ss_pred CCccceEeecccc
Q 037111 394 CPQLGILKIAGNN 406 (964)
Q Consensus 394 ~~~L~~L~L~~n~ 406 (964)
+++|+.+++++|+
T Consensus 319 l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 319 VTDRLAIQFGNYK 331 (332)
T ss_dssp BCCSTTEEC----
T ss_pred cchhhhhhccccc
Confidence 9999999999884
No 296
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=6.5e-34 Score=315.59 Aligned_cols=243 Identities=14% Similarity=0.148 Sum_probs=185.2
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccC------chhhHHHHHHHHHHHhCCC---------CCceeeE
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTG------ETTHQKEFLSEIKALTGVR---------HRNIVKF 752 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~---------h~niv~l 752 (964)
.++|+..+.||+|+||+||+|+. +|+.||||++..... .....+.+.+|+.+++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46799999999999999999988 689999999975421 2333467888888888775 5555555
Q ss_pred Eee-----------------eec-------------CceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHH
Q 037111 753 YGF-----------------CSH-------------ARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHAL 802 (964)
Q Consensus 753 ~~~-----------------~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l 802 (964)
.+. +.+ .+..|+||||+++|++.+.+.. ..+++..++.++.||+.||
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence 554 443 6789999999999977666633 3489999999999999999
Q ss_pred HHHh-hCCCCCeEeccCCCCCeEECCCC--------------------ceEEeccCcccccCCCCCCccccccccccccc
Q 037111 803 SYMH-HECRPPIVHRDVSSKNVLLDFEY--------------------EAHVSDFGTAKLLKPDSSNWSELAGTYGYVAP 861 (964)
Q Consensus 803 ~~LH-~~~~~~iiH~dlkp~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aP 861 (964)
+||| ++ +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|+||
T Consensus 175 ~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aP 246 (336)
T 2vuw_A 175 AVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDE 246 (336)
T ss_dssp HHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCS
T ss_pred HHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccCh
Confidence 9999 88 999999999999999887 8999999999876532 34799999999
Q ss_pred cccccCCCCcchhHHHHHHH-HHHHHhCCCCCCccccccCCCCCCCChhHHHHhhhcc-CCCCCccccchHHHHHHHHHH
Q 037111 862 ELAYTMKVTEKCDVYSFGVL-ALEVIKGQHPKDLLSSLSDSSLPGANMNEAIDHMFDA-RLPPPWLEVGVEDKLKSIIEV 939 (964)
Q Consensus 862 E~~~~~~~~~~sDvwSlGvl-l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l 939 (964)
|++.+.. +.++||||+|++ .+++++|..||..... .....+.+... ..+.............++.++
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dl 315 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW----------LHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEF 315 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH----------HHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHH
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcchhh----------hhHHHHhhhhhhccCcccchhhhhhcCHHHHHH
Confidence 9998766 899999998777 7778889988642100 01122222211 111111122345677889999
Q ss_pred HHHccCCCCCCCCCHHHHH
Q 037111 940 ALSCVDANPERRPNMQIVC 958 (964)
Q Consensus 940 i~~cl~~dp~~RPs~~evl 958 (964)
+.+||..| |++|++
T Consensus 316 i~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 316 HRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHGGGSS-----SHHHHH
T ss_pred HHHHhccC-----CHHHHH
Confidence 99999876 999988
No 297
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=6.1e-32 Score=298.90 Aligned_cols=267 Identities=22% Similarity=0.299 Sum_probs=153.2
Q ss_pred ceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCC
Q 037111 85 HLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDG 164 (964)
Q Consensus 85 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~ 164 (964)
+++.++++++.++ .+|..+. +.|++|+|++|.+++..+..|+. +++|++|+|++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~-----------------------l~~L~~L~L~~ 85 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKN-----------------------LKNLHTLILIN 85 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTT-----------------------CTTCCEEECCS
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhcc-----------------------CCCCCEEECCC
Confidence 4555566555555 3444332 34555555555555433334444 44555555555
Q ss_pred CCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCC--C
Q 037111 165 NHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG--S 242 (964)
Q Consensus 165 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~ 242 (964)
|++++..|..|+++++|++|+|++|+++ .+|..+. ++|++|++++|++++..+..|..+++|++|++++|.++. .
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 162 (330)
T 1xku_A 86 NKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGI 162 (330)
T ss_dssp SCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGB
T ss_pred CcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCc
Confidence 5555444555555555555555555555 3343333 455555555555555555555555666666666665532 4
Q ss_pred ChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccC
Q 037111 243 IPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQS 322 (964)
Q Consensus 243 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 322 (964)
.+..+..+++|++|++++|+++ .+|..+. ++|++|++++|++++..|..+..+++|+.|++++|++++..+..+..+
T Consensus 163 ~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 239 (330)
T 1xku_A 163 ENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 239 (330)
T ss_dssp CTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGS
T ss_pred ChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCC
Confidence 4555666666666666666665 3444332 566666666666666556666666666666666666666555555556
Q ss_pred CcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCC------CCCCcEEEccCCeec
Q 037111 323 GSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGI------YPNLKLFDLSYNKFY 384 (964)
Q Consensus 323 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~------l~~L~~L~Ls~N~i~ 384 (964)
++|++|++++|.+. .+|..+..+++|+.|++++|+++++....|.. .+.++.|++++|++.
T Consensus 240 ~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 240 PHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp TTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred CCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccc
Confidence 66666666666555 45566777777777777777777776666643 255666666666654
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=3.8e-36 Score=349.34 Aligned_cols=354 Identities=22% Similarity=0.194 Sum_probs=170.6
Q ss_pred CCCCEEEcCCCCCCCCCCCC-CCCCCCCcEEEEecCCCCC----CCCccccCCCCcchhhcccccccCCccccc-cCcc-
Q 037111 155 SSLKNLALDGNHLDGPIPVS-IGNLSSLVGLYLYNNSLPG----SIPSSIGNLSNLVYLFLKKNHLRGPIPSSF-GYLR- 227 (964)
Q Consensus 155 ~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~- 227 (964)
++|++|+|++|+++...... +..+++|++|+|++|.+++ .++..+..+++|++|+|++|.+++..+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 45667777777766433222 5566677777777777663 234455566666666666666654333222 2233
Q ss_pred ---ccceeeccccccCC----CChhhhhcccccceeeccccccccccCCccc-----CccccceeecccccccccC----
Q 037111 228 ---KLTKLELSNNQLSG----SIPQEIGNLKLLTDLSLSQNQLRGTVPSSLS-----NLSSLEILHLYDNQLSGHI---- 291 (964)
Q Consensus 228 ---~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-----~l~~L~~L~L~~N~l~~~~---- 291 (964)
+|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+. ..++|++|++++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 46666666666653 3355566666666666666666543222221 1345666666666655422
Q ss_pred CcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccc-cCCCcCCeeecCCCccccc----cCcc
Q 037111 292 PQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTL-RNCTSLERVRLEKNQLIGN----ISDD 366 (964)
Q Consensus 292 ~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l-~~l~~L~~L~L~~N~l~~~----~~~~ 366 (964)
+..+..+++|++|++++|.+++..+..++. .+ ...++|+.|++++|.++.. .+..
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~--------------------~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 222 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQ--------------------GLKDSPCQLEALKLESCGVTSDNCRDLCGI 222 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHH--------------------HHHHSCCCCCEEECTTSCCBTTHHHHHHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHH--------------------HHhcCCCCceEEEccCCCCcHHHHHHHHHH
Confidence 334444555555555555554432222221 00 0123455555555554442 1233
Q ss_pred cCCCCCCcEEEccCCeeccccC-----ccccCCCccceEeecccccCCC----CCCCCcccccCcEEeccCCcccccCCc
Q 037111 367 FGIYPNLKLFDLSYNKFYGELS-----SNWWNCPQLGILKIAGNNITGG----IPPEIGNATQLHELDFSSNHLVGKVPL 437 (964)
Q Consensus 367 ~~~l~~L~~L~Ls~N~i~~~~~-----~~~~~~~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 437 (964)
+..+++|+.|++++|++++... ..+..+++|++|++++|.++.. ++..+..+++|++|+|++|.+.+..+.
T Consensus 223 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 223 VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred HHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 3344555555555555543221 1111234444444444444321 223333445555555555555433332
Q ss_pred ccccc-----CCcceeecccccccCC----CchhhhccCCCCceecccCccccccCCCccc-----ccccceecCCcccc
Q 037111 438 ELANL-----TSLNDLILNGNQLSGG----IPPELGLLTDLGYLDLSANRFSKSIPGNMGY-----LLKLHYLNMSSNEF 503 (964)
Q Consensus 438 ~l~~l-----~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l 503 (964)
.+... ++|++|+|++|.+++. ++..+..+++|++|+|++|++++..+..+.. .++|++|+|++|++
T Consensus 303 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 303 LLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 22221 3555555555555433 2333444455555555555554433322221 33455555555555
Q ss_pred Cc----cchhhhhccccCCeecccCcccc
Q 037111 504 SQ----EIPIQLGKLVQLSELDLSHNLLR 528 (964)
Q Consensus 504 ~~----~~~~~~~~l~~L~~L~Ls~N~l~ 528 (964)
++ .+|..+..+++|++|+|++|+++
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 43 34444444455555555555444
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=4.4e-36 Score=348.85 Aligned_cols=354 Identities=18% Similarity=0.144 Sum_probs=159.4
Q ss_pred CCCcEEEEecCCCCCCCCcc-ccCCCCcchhhcccccccCC----ccccccCccccceeeccccccCCCChhhhh-ccc-
Q 037111 179 SSLVGLYLYNNSLPGSIPSS-IGNLSNLVYLFLKKNHLRGP----IPSSFGYLRKLTKLELSNNQLSGSIPQEIG-NLK- 251 (964)
Q Consensus 179 ~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~- 251 (964)
++|++|+|++|+++...... +..+++|++|+|++|++++. ++..+..+++|++|+|++|.+++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 34556666666555322111 34445555555555555431 233344445555555555554432222222 122
Q ss_pred ---ccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCccccc-----CC
Q 037111 252 ---LLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQ-----SG 323 (964)
Q Consensus 252 ---~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----~~ 323 (964)
+|++|+|++|+++.... ..++..+..+++|++|++++|.+++..+..++. ..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~--------------------~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~ 142 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGC--------------------GVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQC 142 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGH--------------------HHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTC
T ss_pred CCCceeEEEccCCCCCHHHH--------------------HHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCC
Confidence 34444444444442100 122344444444444444444444322222211 12
Q ss_pred cceEEEeecccccc----cccccccCCCcCCeeecCCCccccccCcccC-----CCCCCcEEEccCCeecccc----Ccc
Q 037111 324 SLQYFSVHDNYFIG----SLPKTLRNCTSLERVRLEKNQLIGNISDDFG-----IYPNLKLFDLSYNKFYGEL----SSN 390 (964)
Q Consensus 324 ~L~~L~l~~n~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~i~~~~----~~~ 390 (964)
+|++|++++|.+.+ .++..+..+++|++|++++|.++......+. ..++|+.|++++|.+++.. +..
T Consensus 143 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 222 (461)
T 1z7x_W 143 RLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGI 222 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHH
T ss_pred cceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHH
Confidence 34444444443333 2244555566677777777766554333332 2446777777777666532 333
Q ss_pred ccCCCccceEeecccccCCCC-----CCCCcccccCcEEeccCCccccc----CCccccccCCcceeecccccccCCCch
Q 037111 391 WWNCPQLGILKIAGNNITGGI-----PPEIGNATQLHELDFSSNHLVGK----VPLELANLTSLNDLILNGNQLSGGIPP 461 (964)
Q Consensus 391 ~~~~~~L~~L~L~~n~i~~~~-----~~~~~~l~~L~~L~Ls~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~~~ 461 (964)
+..+++|++|++++|.+++.. +..+..+++|++|++++|++++. ++..+..+++|++|+|++|.+++..+.
T Consensus 223 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 223 VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred HHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 344555555555555544321 11112344555555555555432 333444455555555555555433333
Q ss_pred hhhcc-----CCCCceecccCccccc----cCCCcccccccceecCCccccCccchhhhhc-----cccCCeecccCccc
Q 037111 462 ELGLL-----TDLGYLDLSANRFSKS----IPGNMGYLLKLHYLNMSSNEFSQEIPIQLGK-----LVQLSELDLSHNLL 527 (964)
Q Consensus 462 ~~~~l-----~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l 527 (964)
.+... ++|++|+|++|.+++. ++..+..+++|++|++++|++++..+..+.. .++|+.|+|++|++
T Consensus 303 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 303 LLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 33221 3455555555554433 2223333445555555555554433333332 33455555555554
Q ss_pred cC----CCChhcccccccceeeccCCcCC
Q 037111 528 RG----EIPPEICNLESLEKLNLSHNNLS 552 (964)
Q Consensus 528 ~~----~~~~~~~~l~~L~~L~Ls~N~l~ 552 (964)
++ .+|..+..+++|++|+|++|+++
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 43 34444444455555555555544
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.9e-31 Score=297.87 Aligned_cols=279 Identities=22% Similarity=0.197 Sum_probs=224.9
Q ss_pred CCCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcC
Q 037111 45 TTPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKI 124 (964)
Q Consensus 45 ~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 124 (964)
..+|.|.|+ |+. ++++ +..+|.+.+++|++|+|++|++++..+..|.++++|++|+|++|.+++..
T Consensus 27 ~~~C~~~~~-c~~---------~~~~----l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 92 (353)
T 2z80_A 27 SLSCDRNGI-CKG---------SSGS----LNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIE 92 (353)
T ss_dssp CCEECTTSE-EEC---------CSTT----CSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEEC
T ss_pred CCCCCCCeE-eeC---------CCCC----cccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccC
Confidence 456899998 863 2333 33566677789999999999999877779999999999999999999888
Q ss_pred CcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCC-CCCCCCCCCcEEEEecC-CCCCCCCccccC
Q 037111 125 PSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIP-VSIGNLSSLVGLYLYNN-SLPGSIPSSIGN 201 (964)
Q Consensus 125 p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~ 201 (964)
|..++.+++|++|++++|++++.++. ++.+++|++|+|++|++++..+ ..++++++|++|++++| .+++..|..+++
T Consensus 93 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 172 (353)
T 2z80_A 93 EDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAG 172 (353)
T ss_dssp TTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTT
T ss_pred HhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccC
Confidence 88999999999999999999988776 8999999999999999995444 48999999999999999 577666788999
Q ss_pred CCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCccc---Cccccc
Q 037111 202 LSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLS---NLSSLE 278 (964)
Q Consensus 202 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~---~l~~L~ 278 (964)
+++|++|++++|++++..|..|..+++|++|++++|+++...+..+..+++|+.|++++|++++..+..+. ....++
T Consensus 173 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~ 252 (353)
T 2z80_A 173 LTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIK 252 (353)
T ss_dssp CCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCC
T ss_pred CCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhh
Confidence 99999999999999999899999999999999999999854444455689999999999999976554433 355677
Q ss_pred eeecccccccc----cCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccc
Q 037111 279 ILHLYDNQLSG----HIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIG 337 (964)
Q Consensus 279 ~L~L~~N~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~ 337 (964)
.++++++.+++ .+|..+..+++|+.|++++|+++...+..+..+++|++|++++|.+.+
T Consensus 253 ~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 253 KFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp EEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccC
Confidence 77777777764 356677778888888888888775433334555555555555555443
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=7.6e-32 Score=294.79 Aligned_cols=254 Identities=26% Similarity=0.271 Sum_probs=218.8
Q ss_pred CCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccC--c
Q 037111 46 TPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSG--K 123 (964)
Q Consensus 46 ~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~--~ 123 (964)
..|.|.+|.|+..+ +..+|.+.+++|++|+|++|++++..+..|+++++|++|+|++|.++. .
T Consensus 5 C~C~~~~l~c~~~~---------------l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~ 69 (306)
T 2z66_A 5 CSCSGTEIRCNSKG---------------LTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGC 69 (306)
T ss_dssp CEEETTEEECCSSC---------------CSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEE
T ss_pred CeeCCCEEEcCCCC---------------cccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccC
Confidence 34899999997432 234566667899999999999996545568999999999999999983 3
Q ss_pred CCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCC-CCCCCCCCCcEEEEecCCCCCCCCccccCC
Q 037111 124 IPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIP-VSIGNLSSLVGLYLYNNSLPGSIPSSIGNL 202 (964)
Q Consensus 124 ~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 202 (964)
+|..+..+++|++|++++|.+++.++.+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..|..+.++
T Consensus 70 ~~~~~~~~~~L~~L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 149 (306)
T 2z66_A 70 CSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGL 149 (306)
T ss_dssp EEHHHHSCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTC
T ss_pred cccccccccccCEEECCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccC
Confidence 4677788999999999999999776678999999999999999997655 578999999999999999998888889999
Q ss_pred CCcchhhcccccccC-CccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceee
Q 037111 203 SNLVYLFLKKNHLRG-PIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILH 281 (964)
Q Consensus 203 ~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 281 (964)
++|++|+|++|.+++ ..|..|..+++|++|+|++|++++..|..+..+++|++|+|++|++++..+..+..+++|++|+
T Consensus 150 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 229 (306)
T 2z66_A 150 SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLD 229 (306)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEE
T ss_pred cCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeE
Confidence 999999999999987 5788899999999999999999988788899999999999999999876666788889999999
Q ss_pred cccccccccCCcccccCc-cccEEEeeCccCccc
Q 037111 282 LYDNQLSGHIPQEIGNFM-NLNSLSVGGNQFTGF 314 (964)
Q Consensus 282 L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~ 314 (964)
|++|++++..|..+..++ +|+.|++++|++++.
T Consensus 230 L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 230 YSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred CCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 999999988888888884 899999999988764
No 302
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=3.2e-32 Score=326.95 Aligned_cols=394 Identities=14% Similarity=0.051 Sum_probs=237.7
Q ss_pred CCCCCcEEEEecCCCCCCCCccccCC--CCcchhhccccc-ccC-CccccccCccccceeeccccccCCC----Chhhhh
Q 037111 177 NLSSLVGLYLYNNSLPGSIPSSIGNL--SNLVYLFLKKNH-LRG-PIPSSFGYLRKLTKLELSNNQLSGS----IPQEIG 248 (964)
Q Consensus 177 ~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~-l~~-~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~ 248 (964)
.+++|++|+|++|.+++..+..++.. .+|++|+|++|. ++. .++.....+++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 45666666666666554444444442 236666666654 111 1122223566777777777776654 333445
Q ss_pred cccccceeeccccccc----cccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCc---ccCCccccc
Q 037111 249 NLKLLTDLSLSQNQLR----GTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFT---GFLPQNICQ 321 (964)
Q Consensus 249 ~l~~L~~L~L~~N~l~----~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~---~~~p~~~~~ 321 (964)
.+++|++|++++|.++ +.++..+.++++|+.|++++|.+.+ +|..+..+++|+.|+++.+... +..+..+..
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 5677777777777765 2333444566777777777777664 5566677777777777653222 223344555
Q ss_pred CCcceEEEeecccccccccccccCCCcCCeeecCCCccccccC-cccCCCCCCcEEEccCCeecccc-CccccCCCccce
Q 037111 322 SGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNIS-DDFGIYPNLKLFDLSYNKFYGEL-SSNWWNCPQLGI 399 (964)
Q Consensus 322 ~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~-~~~~~~~~~L~~ 399 (964)
+.+|+.|+++++. ...+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++ +.+.+.. ......+++|++
T Consensus 269 ~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~ 346 (592)
T 3ogk_B 269 PRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKR 346 (592)
T ss_dssp CTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCE
T ss_pred cccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCE
Confidence 6667777776642 33456667777778888887777655433 335667778888777 4443322 222345677777
Q ss_pred Eeecc-----------cccCCCCC-CCCcccccCcEEeccCCcccccCCccccc-cCCcceeecc----cccccCC----
Q 037111 400 LKIAG-----------NNITGGIP-PEIGNATQLHELDFSSNHLVGKVPLELAN-LTSLNDLILN----GNQLSGG---- 458 (964)
Q Consensus 400 L~L~~-----------n~i~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~-l~~L~~L~L~----~N~l~~~---- 458 (964)
|++++ |.+++... .....+++|++|+++.|++++..+..++. +++|+.|+|+ .|.+++.
T Consensus 347 L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~ 426 (592)
T 3ogk_B 347 LRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDN 426 (592)
T ss_dssp EEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHH
T ss_pred EEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHH
Confidence 77773 34442211 11234677888888777777666666654 7778888885 5666643
Q ss_pred -CchhhhccCCCCceecccC--ccccccCCCccc-ccccceecCCccccCcc-chhhhhccccCCeecccCccccCC-CC
Q 037111 459 -IPPELGLLTDLGYLDLSAN--RFSKSIPGNMGY-LLKLHYLNMSSNEFSQE-IPIQLGKLVQLSELDLSHNLLRGE-IP 532 (964)
Q Consensus 459 -~~~~~~~l~~L~~L~Ls~N--~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~-~~ 532 (964)
++..+..+++|++|+|++| .+++..+..+.. +++|++|++++|++++. ++..+..+++|+.|+|++|.+++. ++
T Consensus 427 ~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 506 (592)
T 3ogk_B 427 GVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIA 506 (592)
T ss_dssp HHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHH
T ss_pred HHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHH
Confidence 3344566778888888643 355544444433 67788888888887753 344556778888888888887644 23
Q ss_pred hhcccccccceeeccCCcCCCcccccc-cccccceEEEecCC
Q 037111 533 PEICNLESLEKLNLSHNNLSGSIPTNF-ENMHGLLSIDISYN 573 (964)
Q Consensus 533 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~l~ls~N 573 (964)
..+..+++|+.|+|++|+++......+ ..++.+....+..+
T Consensus 507 ~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 507 AAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp HHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred HHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 334567788888888888775533333 34566666655554
No 303
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=9.3e-33 Score=331.57 Aligned_cols=423 Identities=15% Similarity=0.079 Sum_probs=241.8
Q ss_pred CcCcceeEEeccCCcc---ccCCCcccc------------CCCCcCeeecccCCccCcCCcccCCC--CcccEEEccccc
Q 037111 81 SLFSHLSYLDLNENQL---YGNIPSPIG------------NLTKLKFLNLSSNHFSGKIPSEIGLL--TNLEVLHMFVNH 143 (964)
Q Consensus 81 ~~~~~L~~L~l~~n~l---~~~~p~~~~------------~l~~L~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~l~~n~ 143 (964)
..+++|++|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+..++.+ .+|++|+|++|.
T Consensus 70 ~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~ 149 (592)
T 3ogk_B 70 RRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCS 149 (592)
T ss_dssp HHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCE
T ss_pred HhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCC
Confidence 3466777777766422 134444333 56666666666666665555555442 236666666554
Q ss_pred -cCC-cccc-cCCCCCCCEEEcCCCCCCCC----CCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhccccccc
Q 037111 144 -LNG-SIPE-IGHLSSLKNLALDGNHLDGP----IPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLR 216 (964)
Q Consensus 144 -l~~-~~~~-~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 216 (964)
++. .++. ...+++|++|+|++|.+++. ++..+.++++|++|++++|.+++..+
T Consensus 150 ~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~-------------------- 209 (592)
T 3ogk_B 150 GFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISP-------------------- 209 (592)
T ss_dssp EEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCH--------------------
T ss_pred CcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCH--------------------
Confidence 110 0111 12455555555555555433 11222334444444444444431111
Q ss_pred CCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccc---cccCCcccCccccceeecccccccccCCc
Q 037111 217 GPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLR---GTVPSSLSNLSSLEILHLYDNQLSGHIPQ 293 (964)
Q Consensus 217 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 293 (964)
+.++..+..+++|++|+|++|.+.+ +|..+..+++|++|+++.+... +..+..+..+++|+.|+++++... .+|.
T Consensus 210 ~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~ 287 (592)
T 3ogk_B 210 KDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPI 287 (592)
T ss_dssp HHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGG
T ss_pred HHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHH
Confidence 1223344556677777777777664 5666777777777777653322 223345666777777777765433 5666
Q ss_pred ccccCccccEEEeeCccCcccCC-cccccCCcceEEEeecccccccccccccCCCcCCeeecC-----------CCcccc
Q 037111 294 EIGNFMNLNSLSVGGNQFTGFLP-QNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLE-----------KNQLIG 361 (964)
Q Consensus 294 ~~~~l~~L~~L~l~~N~l~~~~p-~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~-----------~N~l~~ 361 (964)
.+..+++|++|++++|.+++... ..+..+++|+.|+++++...+.++..+..+++|++|+++ .|.++.
T Consensus 288 ~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~ 367 (592)
T 3ogk_B 288 LFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQ 367 (592)
T ss_dssp GGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCH
T ss_pred HHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCH
Confidence 67777777777777777654332 223455666666666332222334444556666666666 244443
Q ss_pred ccCcc-cCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcc-cccCcEEecc----CCccccc-
Q 037111 362 NISDD-FGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGN-ATQLHELDFS----SNHLVGK- 434 (964)
Q Consensus 362 ~~~~~-~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~-l~~L~~L~Ls----~N~l~~~- 434 (964)
..... +..+++|+.|+++.|++++... ..+.. +++|+.|+++ .|++++.
T Consensus 368 ~~~~~l~~~~~~L~~L~l~~~~l~~~~~------------------------~~l~~~~~~L~~L~l~~~~~~n~l~~~p 423 (592)
T 3ogk_B 368 RGLIALAQGCQELEYMAVYVSDITNESL------------------------ESIGTYLKNLCDFRLVLLDREERITDLP 423 (592)
T ss_dssp HHHHHHHHHCTTCSEEEEEESCCCHHHH------------------------HHHHHHCCSCCEEEEEECSCCSCCSSCC
T ss_pred HHHHHHHhhCccCeEEEeecCCccHHHH------------------------HHHHhhCCCCcEEEEeecCCCccccCch
Confidence 21111 2234555555555555544332 23322 4556666664 4555532
Q ss_pred ----CCccccccCCcceeecccc--cccCCCchhhhc-cCCCCceecccCccccc-cCCCcccccccceecCCccccCcc
Q 037111 435 ----VPLELANLTSLNDLILNGN--QLSGGIPPELGL-LTDLGYLDLSANRFSKS-IPGNMGYLLKLHYLNMSSNEFSQE 506 (964)
Q Consensus 435 ----~~~~l~~l~~L~~L~L~~N--~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~ 506 (964)
++..+..+++|+.|+|++| .+++..+..+.. +++|++|+|++|.+++. .+..+..+++|++|++++|.+++.
T Consensus 424 ~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 503 (592)
T 3ogk_B 424 LDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSER 503 (592)
T ss_dssp CHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHH
T ss_pred HHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHH
Confidence 2233566788888888643 355555555543 78899999999988763 344456788999999999998765
Q ss_pred -chhhhhccccCCeecccCccccCCCChhc-ccccccceeeccCC
Q 037111 507 -IPIQLGKLVQLSELDLSHNLLRGEIPPEI-CNLESLEKLNLSHN 549 (964)
Q Consensus 507 -~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N 549 (964)
++..+..+++|+.|+|++|++++.....+ ..++.+....+..+
T Consensus 504 ~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 504 AIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp HHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred HHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 34455678999999999999986544444 35677766666554
No 304
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=4e-30 Score=287.07 Aligned_cols=275 Identities=22% Similarity=0.221 Sum_probs=155.0
Q ss_pred eEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCC
Q 037111 87 SYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNH 166 (964)
Q Consensus 87 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~ 166 (964)
...|+++|.++ .+|..+. ++|++|+|++|++++..+..++.+++| ++|+|++|+
T Consensus 34 ~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L-----------------------~~L~L~~n~ 87 (353)
T 2z80_A 34 GICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNL-----------------------QALVLTSNG 87 (353)
T ss_dssp SEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTC-----------------------CEEECTTSC
T ss_pred eEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCC-----------------------CEEECCCCc
Confidence 34555555555 3444332 355555555555554333344444444 445555555
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCcc-ccccCccccceeecccc-ccCCCCh
Q 037111 167 LDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIP-SSFGYLRKLTKLELSNN-QLSGSIP 244 (964)
Q Consensus 167 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N-~l~~~~p 244 (964)
+++..|..|+++++|++|+|++|++++..+..++++++|++|+|++|++++..+ ..|..+++|++|++++| .+++..+
T Consensus 88 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 167 (353)
T 2z80_A 88 INTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQR 167 (353)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred cCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCH
Confidence 444444445555555555555555553322334555555555555555553332 34555555555555555 3444444
Q ss_pred hhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccc---c
Q 037111 245 QEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNIC---Q 321 (964)
Q Consensus 245 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~---~ 321 (964)
..+..+++|++|++++|++++..|..+..+++|++|++++|+++...+..+..+++|+.|++++|.+++..+..+. .
T Consensus 168 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~ 247 (353)
T 2z80_A 168 KDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGET 247 (353)
T ss_dssp TTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------C
T ss_pred HHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccc
Confidence 4555555666666666666555555566666666666666665432222334456666666666666655444332 2
Q ss_pred CCcceEEEeecccccc----cccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeecccc
Q 037111 322 SGSLQYFSVHDNYFIG----SLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGEL 387 (964)
Q Consensus 322 ~~~L~~L~l~~n~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~ 387 (964)
...++.++++++.+.+ .+|..+..+++|+.|++++|+++.++...|..+++|+.|+|++|++.+..
T Consensus 248 ~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 248 NSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp CCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 3456666666666554 45677788888888888888888777777788888888888888887543
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=3.1e-29 Score=289.66 Aligned_cols=236 Identities=25% Similarity=0.256 Sum_probs=204.0
Q ss_pred CCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCC
Q 037111 76 DQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHL 154 (964)
Q Consensus 76 ~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l 154 (964)
..+|.+..+++++|+|++|++++..|..|+++++|++|+|++|.|++..|..|..+++|++|+|++|++++.++. +..+
T Consensus 67 ~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 146 (452)
T 3zyi_A 67 SEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYL 146 (452)
T ss_dssp SSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSC
T ss_pred CccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhccc
Confidence 355666778999999999999998899999999999999999999988888999999999999999999988776 8889
Q ss_pred CCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecC-CCCCCCCccccCCCCcchhhcccccccCCccccccCccccceee
Q 037111 155 SSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNN-SLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLE 233 (964)
Q Consensus 155 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 233 (964)
++|++|+|++|++++..+..|.++++|++|++++| .+....+..|.++++|++|+|++|++++. | .+..+++|++|+
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~ 224 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELE 224 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEE
T ss_pred CCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEE
Confidence 99999999999999777778999999999999984 55544445688899999999999999864 3 478888999999
Q ss_pred ccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcc
Q 037111 234 LSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTG 313 (964)
Q Consensus 234 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 313 (964)
|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 225 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 225 MSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 99999988888888899999999999999988888888888999999999999887777778888888888888888764
No 306
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.3e-28 Score=270.95 Aligned_cols=224 Identities=24% Similarity=0.276 Sum_probs=164.4
Q ss_pred CCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEE
Q 037111 106 NLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLY 185 (964)
Q Consensus 106 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 185 (964)
..++++.|+|++|+++ .+|..++.+++|++|+|++|.++..+..++.+++|++|+|++|+++ .+|..++++++|++|+
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 3578999999999999 8999999999999999999999955446899999999999999999 7899999999999999
Q ss_pred EecCCCCCCCCccccC---------CCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhccccccee
Q 037111 186 LYNNSLPGSIPSSIGN---------LSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDL 256 (964)
Q Consensus 186 L~~N~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 256 (964)
|++|++.+.+|..++. +++|++|+|++|+++ .+|..++.+++|++|+|++|++++ +|..++.+++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEE
Confidence 9999988899987764 666666666666666 455566666666666666666663 44456666666666
Q ss_pred eccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecc
Q 037111 257 SLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDN 333 (964)
Q Consensus 257 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n 333 (964)
+|++|++.+.+|..+..+++|++|+|++|++.+.+|..+..+++|+.|+|++|++.+.+|..+..+++++.+++..+
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~ 311 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPH 311 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGG
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHH
Confidence 66666666666666666666666666666666666666666666666666666666555555555555555554443
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=3.1e-29 Score=271.03 Aligned_cols=224 Identities=25% Similarity=0.282 Sum_probs=162.2
Q ss_pred eEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccc
Q 037111 62 ISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFV 141 (964)
Q Consensus 62 ~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~ 141 (964)
+.+++++.+++ .+|.+.+++|++|+|++|.+++..+..|+.+++|++|+|++|.+++..|..++.+++|++|++++
T Consensus 14 ~~~~c~~~~l~----~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ----AVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS----SCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc----cCCcCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 34455555443 45667778899999999999887777889999999999999999877788888888888888888
Q ss_pred cc-cCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCc
Q 037111 142 NH-LNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPI 219 (964)
Q Consensus 142 n~-l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 219 (964)
|. ++...|. +..+++|++|+|++|++++..|..+.++++|++|++++|++++..+..|+++++|++|+|++|++++..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 86 6665443 777788888888888887777777777788888888888777665566777777777777777777655
Q ss_pred cccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccc
Q 037111 220 PSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG 289 (964)
Q Consensus 220 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 289 (964)
+..|..+++|++|+|++|.+++..|..|..+++|+.|++++|++++..+..+..+++|++|++++|++..
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 5566666666666666666666556666666666666666666665444445666666666666666553
No 308
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=6.5e-29 Score=268.45 Aligned_cols=255 Identities=25% Similarity=0.258 Sum_probs=214.3
Q ss_pred eEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCccc-ccCCCCCCCEEEcCCC
Q 037111 87 SYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGN 165 (964)
Q Consensus 87 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~L~~n 165 (964)
+.++.+++.++ .+|..+ .++|++|+|++|.+++..+..++.+++|++|++++|.+++..| .+..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 57889999998 467654 5799999999999997777789999999999999999998866 4889999999999999
Q ss_pred C-CCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCCh
Q 037111 166 H-LDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIP 244 (964)
Q Consensus 166 ~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 244 (964)
. +++..|..+..+++|++|++++|++++..|..+.++++|++|+|++|++++..+..|+.+++|++|+|++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 7 887778899999999999999999998888889999999999999999998877889999999999999999997766
Q ss_pred hhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCc
Q 037111 245 QEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGS 324 (964)
Q Consensus 245 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ 324 (964)
..+..+++|++|+|++|++++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|++....+.. .....
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~ 249 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAW 249 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHH
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHH
Confidence 77899999999999999999888889999999999999999999766677899999999999999988543321 11123
Q ss_pred ceEEEeecccccccccccccC
Q 037111 325 LQYFSVHDNYFIGSLPKTLRN 345 (964)
Q Consensus 325 L~~L~l~~n~l~~~~p~~l~~ 345 (964)
++.+....+.+....|..+.+
T Consensus 250 l~~~~~~~~~~~c~~p~~l~g 270 (285)
T 1ozn_A 250 LQKFRGSSSEVPCSLPQRLAG 270 (285)
T ss_dssp HHHCCSEECCCBEEESGGGTT
T ss_pred HHhcccccCccccCCchHhCC
Confidence 444445566666666655543
No 309
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.8e-28 Score=267.96 Aligned_cols=248 Identities=24% Similarity=0.252 Sum_probs=130.9
Q ss_pred ceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeeccccccccc--CCcccccCccccEEEee
Q 037111 230 TKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGH--IPQEIGNFMNLNSLSVG 307 (964)
Q Consensus 230 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~l~ 307 (964)
+.++++++.++ .+|..+ .++|++|+|++|+++...+..|.++++|++|+|++|+++.. .+..+..+++|+.|+++
T Consensus 10 ~~l~c~~~~l~-~ip~~~--~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCC--CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 35556666655 334322 24556666666666533333355556666666666655521 23444445555555555
Q ss_pred CccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccC-cccCCCCCCcEEEccCCeeccc
Q 037111 308 GNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNIS-DDFGIYPNLKLFDLSYNKFYGE 386 (964)
Q Consensus 308 ~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~i~~~ 386 (964)
+|.+++ +|..+..+++|++|++++|.+++... ..+..+++|+.|++++|++.+.
T Consensus 87 ~n~i~~-------------------------l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 141 (306)
T 2z66_A 87 FNGVIT-------------------------MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVA 141 (306)
T ss_dssp SCSEEE-------------------------EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEEC
T ss_pred CCcccc-------------------------ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCcc
Confidence 554442 23334455555555555555555443 4455555555555555555544
Q ss_pred cCccccCCCccceEeecccccCC-CCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhc
Q 037111 387 LSSNWWNCPQLGILKIAGNNITG-GIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGL 465 (964)
Q Consensus 387 ~~~~~~~~~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 465 (964)
.+..+..+++|++|++++|.+++ ..|..+..+++|++|+|++|++++..|..+..+++|++|+|++|.+++..+..+..
T Consensus 142 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 221 (306)
T 2z66_A 142 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 221 (306)
T ss_dssp STTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTT
T ss_pred chhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccC
Confidence 44444444445555554444443 34455555556666666666665555555555566666666666555544445555
Q ss_pred cCCCCceecccCccccccCCCccccc-ccceecCCccccCc
Q 037111 466 LTDLGYLDLSANRFSKSIPGNMGYLL-KLHYLNMSSNEFSQ 505 (964)
Q Consensus 466 l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~ 505 (964)
+++|++|+|++|++++..|..+..++ +|++|+|++|.++.
T Consensus 222 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 222 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred cccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 55555555555555555555555552 55555555555543
No 310
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2.2e-28 Score=281.50 Aligned_cols=236 Identities=28% Similarity=0.291 Sum_probs=201.4
Q ss_pred CCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCC
Q 037111 76 DQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHL 154 (964)
Q Consensus 76 ~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l 154 (964)
..+|.+..++++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|++++.++. +..+
T Consensus 56 ~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 135 (440)
T 3zyj_A 56 REVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYL 135 (440)
T ss_dssp SSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSC
T ss_pred CcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhcc
Confidence 456777778999999999999988889999999999999999999987778899999999999999999987774 8899
Q ss_pred CCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecC-CCCCCCCccccCCCCcchhhcccccccCCccccccCccccceee
Q 037111 155 SSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNN-SLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLE 233 (964)
Q Consensus 155 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 233 (964)
++|++|+|++|++++..+..|.++++|++|+|++| .++...+..|.++++|++|+|++|+++.. | .+..+++|++|+
T Consensus 136 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~ 213 (440)
T 3zyj_A 136 SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-P-NLTPLIKLDELD 213 (440)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-C-CCTTCSSCCEEE
T ss_pred ccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-c-ccCCCcccCEEE
Confidence 99999999999999777778999999999999985 44434445788889999999999998843 4 477888888888
Q ss_pred ccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcc
Q 037111 234 LSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTG 313 (964)
Q Consensus 234 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 313 (964)
|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++..
T Consensus 214 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 214 LSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 88888887778888888888888888888887778888888888888888888887777777888888888888888763
No 311
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=8.5e-30 Score=278.92 Aligned_cols=244 Identities=21% Similarity=0.182 Sum_probs=166.3
Q ss_pred cCcceeEEeccCCccccCCCccccCCCCcCeeecccCCc-cCcCCcccC-------CCCcccEEEccccccCCcccc-c-
Q 037111 82 LFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHF-SGKIPSEIG-------LLTNLEVLHMFVNHLNGSIPE-I- 151 (964)
Q Consensus 82 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l-~~~~p~~~~-------~l~~L~~L~l~~n~l~~~~~~-~- 151 (964)
..++|+.|++++|.+ .+|..+... |+.|+|++|.+ .+.+|..+. .+++|++|+|++|++++.+|. +
T Consensus 41 ~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 116 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL 116 (312)
T ss_dssp EEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS
T ss_pred cCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH
Confidence 345677888888888 677766554 88888888888 456666665 677888888888888776664 3
Q ss_pred -CCCCCCCEEEcCCCCCCCCCCCCCCCC-----CCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCC--ccccc
Q 037111 152 -GHLSSLKNLALDGNHLDGPIPVSIGNL-----SSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGP--IPSSF 223 (964)
Q Consensus 152 -~~l~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~~~~~ 223 (964)
+.+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|+++++|++|+|++|++.+. .+..+
T Consensus 117 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 195 (312)
T 1wwl_A 117 EATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL 195 (312)
T ss_dssp SCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHS
T ss_pred HhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHH
Confidence 7778888888888888766 6666666 7788888888888777777777888888888888877654 23333
Q ss_pred --cCccccceeeccccccCCC--Ch-hhhhcccccceeeccccccccccC-CcccCccccceeecccccccccCCccccc
Q 037111 224 --GYLRKLTKLELSNNQLSGS--IP-QEIGNLKLLTDLSLSQNQLRGTVP-SSLSNLSSLEILHLYDNQLSGHIPQEIGN 297 (964)
Q Consensus 224 --~~l~~L~~L~L~~N~l~~~--~p-~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 297 (964)
..+++|++|+|++|++++. ++ ..+..+++|++|+|++|++++..| ..+..+++|++|+|++|+|+ .+|..+.
T Consensus 196 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~- 273 (312)
T 1wwl_A 196 CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP- 273 (312)
T ss_dssp CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-
T ss_pred HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-
Confidence 6777788888888877731 11 333456777777777777776554 34555677777777777777 5665554
Q ss_pred CccccEEEeeCccCcccCCcccccCCcceEEEeecccc
Q 037111 298 FMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYF 335 (964)
Q Consensus 298 l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l 335 (964)
++|+.|++++|+|++. |. +..+++|++|++++|.+
T Consensus 274 -~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l 308 (312)
T 1wwl_A 274 -AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPF 308 (312)
T ss_dssp -SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTT
T ss_pred -CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCC
Confidence 6677777777776654 32 44444444444444433
No 312
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=8.8e-28 Score=277.52 Aligned_cols=232 Identities=22% Similarity=0.209 Sum_probs=190.4
Q ss_pred CcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEec
Q 037111 347 TSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDF 426 (964)
Q Consensus 347 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 426 (964)
++++.|+|++|.|+++.+..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|.|+...+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 45666777777777666667777777777777777777666667777777777777777777676777888888888888
Q ss_pred cCCcccccCCccccccCCcceeeccc-ccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCc
Q 037111 427 SSNHLVGKVPLELANLTSLNDLILNG-NQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQ 505 (964)
Q Consensus 427 s~N~l~~~~~~~l~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 505 (964)
++|+|+...+..|..+++|+.|+|++ |.+....+..|..+++|++|+|++|++++. | .+..+++|++|+|++|+|++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 88888877777788888888888888 455544445688889999999999998754 3 57888999999999999998
Q ss_pred cchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCC
Q 037111 506 EIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIP 580 (964)
Q Consensus 506 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 580 (964)
..|..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+...
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 889999999999999999999998888899999999999999999998888889999999999999999988654
No 313
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=3.8e-30 Score=281.69 Aligned_cols=245 Identities=22% Similarity=0.233 Sum_probs=209.7
Q ss_pred CeeEEecCCCCCCCccCCCccCcCcceeEEeccCCcc-ccCCCcccc-------CCCCcCeeecccCCccCcCCccc--C
Q 037111 60 RIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQL-YGNIPSPIG-------NLTKLKFLNLSSNHFSGKIPSEI--G 129 (964)
Q Consensus 60 ~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l-~~~~p~~~~-------~l~~L~~L~Ls~n~l~~~~p~~~--~ 129 (964)
+++.+++.++.+ .+|......|+.|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|..+ +
T Consensus 44 ~L~~l~l~~n~l-----~~p~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 118 (312)
T 1wwl_A 44 SLEYLLKRVDTE-----ADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEA 118 (312)
T ss_dssp ECTTHHHHCCTT-----CCCHHHHHHHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSC
T ss_pred CceeEeeccccc-----ccHHHHHHHHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHh
Confidence 455666777766 33444455699999999999 456887776 89999999999999999999987 9
Q ss_pred CCCcccEEEccccccCCcccccCCC-----CCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCC--CCccc--c
Q 037111 130 LLTNLEVLHMFVNHLNGSIPEIGHL-----SSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS--IPSSI--G 200 (964)
Q Consensus 130 ~l~~L~~L~l~~n~l~~~~~~~~~l-----~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~--~ 200 (964)
.+++|++|+|++|++++.++.++.+ ++|++|+|++|++++..|..++++++|++|+|++|++.+. .|..+ +
T Consensus 119 ~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 119 TGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp CSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred cCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 9999999999999999985446666 9999999999999998889999999999999999998865 34444 8
Q ss_pred CCCCcchhhcccccccCC---ccccccCccccceeeccccccCCCCh-hhhhcccccceeeccccccccccCCcccCccc
Q 037111 201 NLSNLVYLFLKKNHLRGP---IPSSFGYLRKLTKLELSNNQLSGSIP-QEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSS 276 (964)
Q Consensus 201 ~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 276 (964)
++++|++|+|++|++++. ....+..+++|++|+|++|++++..| ..+..+++|++|+|++|+|+ .+|..+. ++
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~ 275 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AK 275 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CC
Confidence 999999999999999942 22445688999999999999998775 45667899999999999999 7888776 89
Q ss_pred cceeecccccccccCCcccccCccccEEEeeCccCccc
Q 037111 277 LEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGF 314 (964)
Q Consensus 277 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 314 (964)
|++|+|++|+|++. |. +..+++|+.|++++|++++.
T Consensus 276 L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 276 LSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp EEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred ceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 99999999999965 66 99999999999999999863
No 314
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.6e-28 Score=290.40 Aligned_cols=290 Identities=25% Similarity=0.339 Sum_probs=142.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCceeeceEeCC-------CCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCC
Q 037111 28 NSLLPSWTLDPVNATNITTPCTWSGISCNH-------AGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNI 100 (964)
Q Consensus 28 ~~~l~sW~~~~~~~~~~~~~C~w~gv~C~~-------~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~ 100 (964)
...+++|..+ ++||.|.|..|.. ...++.+++++++++ .+|...+++|++|+|++|+|+ .+
T Consensus 9 ~~~w~~W~~~-------~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~----~lp~~l~~~L~~L~L~~N~l~-~l 76 (622)
T 3g06_A 9 DAVWSAWRRA-------APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT----TLPDCLPAHITTLVIPDNNLT-SL 76 (622)
T ss_dssp -CHHHHHHHT-------CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS----CCCSCCCTTCSEEEECSCCCS-CC
T ss_pred HHHHHHHHhc-------CCcchhccccccCcccccccCCCCcEEEecCCCcC----ccChhhCCCCcEEEecCCCCC-CC
Confidence 3455667542 5789997754421 123455555555544 222223345555555555555 23
Q ss_pred CccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCC
Q 037111 101 PSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSS 180 (964)
Q Consensus 101 p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 180 (964)
|. .+++|++|+|++|.|+ .+|. .+++|++|+|++|++++.++ .+++|+.|++++|++++ +|.. +++
T Consensus 77 p~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~ 142 (622)
T 3g06_A 77 PA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTHLPA---LPSGLCKLWIFGNQLTS-LPVL---PPG 142 (622)
T ss_dssp CC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCCCCC---CCTTCCEEECCSSCCSC-CCCC---CTT
T ss_pred CC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCCCCC---CCCCcCEEECCCCCCCc-CCCC---CCC
Confidence 33 3455555555555555 3443 44555555555555554332 34455555555555553 3332 244
Q ss_pred CcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccc
Q 037111 181 LVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQ 260 (964)
Q Consensus 181 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 260 (964)
|++|+|++|++++ +|.. +++|+.|++++|.+++ +| ..+++|+.|+|++|++++
T Consensus 143 L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~------------------- 195 (622)
T 3g06_A 143 LQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS------------------- 195 (622)
T ss_dssp CCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-------------------
T ss_pred CCEEECcCCcCCC-cCCc---cCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-------------------
Confidence 5555555555542 2321 2344444555555543 22 223444455555554442
Q ss_pred cccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeeccccccccc
Q 037111 261 NQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLP 340 (964)
Q Consensus 261 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p 340 (964)
+|.. +++|+.|++++|.++ .+|.. +++|+.|++++|+|++. | ..+++|+.|++++|.+.. +|
T Consensus 196 ------l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~l-p---~~l~~L~~L~Ls~N~L~~-lp 257 (622)
T 3g06_A 196 ------LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTSL-P---VLPSELKELMVSGNRLTS-LP 257 (622)
T ss_dssp ------CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSC-CC
T ss_pred ------CCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCcC-C---CCCCcCcEEECCCCCCCc-CC
Confidence 2221 234444445544444 22221 24455555555555442 2 223445555555555443 22
Q ss_pred ccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCcccc
Q 037111 341 KTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWW 392 (964)
Q Consensus 341 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~ 392 (964)
. .+++|+.|+|++|+|+.+ +..+..+++|+.|+|++|++++..+..+.
T Consensus 258 ~---~~~~L~~L~Ls~N~L~~l-p~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 258 M---LPSGLLSLSVYRNQLTRL-PESLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp C---CCTTCCEEECCSSCCCSC-CGGGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred c---ccccCcEEeCCCCCCCcC-CHHHhhccccCEEEecCCCCCCcCHHHHH
Confidence 2 345666777777777643 45566677777777777777665554443
No 315
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.2e-27 Score=275.50 Aligned_cols=251 Identities=22% Similarity=0.272 Sum_probs=143.2
Q ss_pred CcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEe
Q 037111 109 KLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLY 187 (964)
Q Consensus 109 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 187 (964)
..+.++.++++++ .+|..+. +++++|+|++|++++..+. +..+++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 3556777777776 5665543 4555555555555544432 4555555555555555554444455555555555555
Q ss_pred cCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeecccccccccc
Q 037111 188 NNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTV 267 (964)
Q Consensus 188 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 267 (964)
+|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++| |.+....
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~-----------------------~~l~~i~ 177 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL-----------------------KRLSYIS 177 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC-----------------------TTCCEEC
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCC-----------------------CCcceeC
Confidence 55555443344555555555555555555444444444455555555442 2222222
Q ss_pred CCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCC
Q 037111 268 PSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCT 347 (964)
Q Consensus 268 p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~ 347 (964)
+..|.++++|++|+|++|+++ .+| .+..+++|+.|+|++|++++..|..|..+++|+.|++++|.+.+..+..|.+++
T Consensus 178 ~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 255 (440)
T 3zyj_A 178 EGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ 255 (440)
T ss_dssp TTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCT
T ss_pred cchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCC
Confidence 223444555555555555554 223 244455555555555555555555555555555555555555556667777788
Q ss_pred cCCeeecCCCccccccCcccCCCCCCcEEEccCCeecccc
Q 037111 348 SLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGEL 387 (964)
Q Consensus 348 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~ 387 (964)
+|+.|+|++|+++++.+..|..+++|+.|+|++|++.+..
T Consensus 256 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 256 SLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp TCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred CCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCC
Confidence 8888888888888888888888888888888888887543
No 316
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=3.2e-27 Score=252.81 Aligned_cols=216 Identities=28% Similarity=0.310 Sum_probs=130.0
Q ss_pred CCCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcC
Q 037111 45 TTPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKI 124 (964)
Q Consensus 45 ~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 124 (964)
.++|.|.|+.|...+.++.++++++.++. +|....+++++|+|++|++++..+..|+++++|++|+|++|.+++..
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~~----ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLTA----IPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCSS----CCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCCc----cCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 36899999999876667778887776653 34444567777777777777655567777777777777777777443
Q ss_pred CcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCC
Q 037111 125 PSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLS 203 (964)
Q Consensus 125 p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 203 (964)
+..+..+++|++|++++|.+++.++. +..+++|++|+|++|++++..|..|+++++|++|+|++|++++..+..|..++
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCc
Confidence 44456666666666666666655543 45566666666666666655555555566666666666655544444455555
Q ss_pred CcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccc
Q 037111 204 NLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLR 264 (964)
Q Consensus 204 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 264 (964)
+|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 158 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 5555555555555444444445555555555555554433334444444444444444443
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=3.5e-29 Score=274.67 Aligned_cols=258 Identities=20% Similarity=0.224 Sum_probs=172.8
Q ss_pred eeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCC
Q 037111 86 LSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGN 165 (964)
Q Consensus 86 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n 165 (964)
++.++++.+.+...++..+..+++|++|+|++|.+++..|..++.+++|++|+|++|.+++.++ +..+++|++|+|++|
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNN 90 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-ETTCTTCCEEECCSS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-hhhcCCCCEEECcCC
Confidence 4555666666654444445556677777777777776656667777777777777777766554 667777777777777
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChh
Q 037111 166 HLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQ 245 (964)
Q Consensus 166 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 245 (964)
++++.. ..++|++|++++|++++..+. .+++|++|++++|++++..+..|+.+++|++|+|++|++++..+.
T Consensus 91 ~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 162 (317)
T 3o53_A 91 YVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA 162 (317)
T ss_dssp EEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGG
T ss_pred cccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHH
Confidence 776432 226777777777777754333 246677777777777776666777777777777777777766565
Q ss_pred hhh-cccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCc
Q 037111 246 EIG-NLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGS 324 (964)
Q Consensus 246 ~~~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ 324 (964)
.+. .+++|++|+|++|++++. +. ...+++|++|+|++|++++ +|..+..+++|+.|++++|++++ +|..+..+++
T Consensus 163 ~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~ 238 (317)
T 3o53_A 163 ELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQN 238 (317)
T ss_dssp GGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTT
T ss_pred HHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccc-hhhHhhcCCC
Confidence 553 567777777777777744 32 2347777777777777774 44457777777777777777774 3555666666
Q ss_pred ceEEEeeccccc-ccccccccCCCcCCeeecCC
Q 037111 325 LQYFSVHDNYFI-GSLPKTLRNCTSLERVRLEK 356 (964)
Q Consensus 325 L~~L~l~~n~l~-~~~p~~l~~l~~L~~L~L~~ 356 (964)
|+.|++++|.+. +.+|..+..+++|+.+++++
T Consensus 239 L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~ 271 (317)
T 3o53_A 239 LEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQT 271 (317)
T ss_dssp CCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHH
T ss_pred CCEEEccCCCccCcCHHHHHhccccceEEECCC
Confidence 666666666665 55666666677777777663
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=5.9e-29 Score=272.91 Aligned_cols=268 Identities=18% Similarity=0.207 Sum_probs=197.1
Q ss_pred ccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecC
Q 037111 276 SLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLE 355 (964)
Q Consensus 276 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~ 355 (964)
+++.++++.+.+...+...+..+++|+.|++++|++++..|..+..+++|++|++++|.+.+..+ +..+++|++|+++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45566777777765555556667788888888888877666666666666666666655554433 4455555555555
Q ss_pred CCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccC
Q 037111 356 KNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKV 435 (964)
Q Consensus 356 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 435 (964)
+|.+++.. ..++|++|++++|.+++..+.. +++|++|++++|++++..
T Consensus 89 ~n~l~~l~-----------------------------~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~ 136 (317)
T 3o53_A 89 NNYVQELL-----------------------------VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLR 136 (317)
T ss_dssp SSEEEEEE-----------------------------ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGG
T ss_pred CCcccccc-----------------------------CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCcc
Confidence 55444322 1245555555555555443332 466888888888888777
Q ss_pred CccccccCCcceeecccccccCCCchhhh-ccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhcc
Q 037111 436 PLELANLTSLNDLILNGNQLSGGIPPELG-LLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKL 514 (964)
Q Consensus 436 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 514 (964)
+..+..+++|++|+|++|.+++..+..+. .+++|++|+|++|.+++..+ ...+++|++|+|++|+|++. |..+..+
T Consensus 137 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l-~~~~~~l 213 (317)
T 3o53_A 137 DLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSA 213 (317)
T ss_dssp GBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGG
T ss_pred chhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcc-hhhhccc
Confidence 77888888899999999988877776664 68899999999999886532 33588999999999999865 4458999
Q ss_pred ccCCeecccCccccCCCChhcccccccceeeccCCcCC-CcccccccccccceEEEec-CCcccccCCC
Q 037111 515 VQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLS-GSIPTNFENMHGLLSIDIS-YNELDGPIPS 581 (964)
Q Consensus 515 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~l~ls-~N~l~~~~~~ 581 (964)
++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+++ +.+|..+..++.|+.++++ .+.++|..|.
T Consensus 214 ~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 214 AGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred CcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 99999999999998 57888999999999999999998 7788899999999999999 5567776554
No 319
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=1.1e-26 Score=274.89 Aligned_cols=268 Identities=25% Similarity=0.316 Sum_probs=137.3
Q ss_pred ccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEee
Q 037111 228 KLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVG 307 (964)
Q Consensus 228 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 307 (964)
+++.|++++|.++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|+.|+++
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 3555555555555 4444333 45555555555555 3333 3455555555555555 2333 34455555555
Q ss_pred CccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeecccc
Q 037111 308 GNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGEL 387 (964)
Q Consensus 308 ~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~ 387 (964)
+|++++.. . .+++|+.|++++|++++++. .+++|+.|+|++|++++..
T Consensus 110 ~N~l~~l~-------------------------~---~l~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~l~ 157 (622)
T 3g06_A 110 SNPLTHLP-------------------------A---LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASLP 157 (622)
T ss_dssp SCCCCCCC-------------------------C---CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCCC
T ss_pred CCcCCCCC-------------------------C---CCCCcCEEECCCCCCCcCCC----CCCCCCEEECcCCcCCCcC
Confidence 55554321 1 23455555666665555332 1355666666666665432
Q ss_pred CccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccC
Q 037111 388 SSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLT 467 (964)
Q Consensus 388 ~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 467 (964)
. .+++|+.|++++|.|++ +| ..+++|+.|++++|+|++ +|.. +++|+.|++++|.++ .+|. .++
T Consensus 158 ~----~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~---~~~ 221 (622)
T 3g06_A 158 A----LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPA---LPS 221 (622)
T ss_dssp C----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCC---CCT
T ss_pred C----ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCC---CCC
Confidence 1 23455555555555553 22 234556666666666653 3322 255666666666665 2332 135
Q ss_pred CCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeecc
Q 037111 468 DLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLS 547 (964)
Q Consensus 468 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 547 (964)
+|+.|+|++|.|++ +| ..+++|+.|+|++|+|+. +|. .+++|+.|+|++|+|+ .+|..+.++++|+.|+|+
T Consensus 222 ~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 222 GLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 55566666665553 33 233555555666665553 332 3455555555555555 445555555555555555
Q ss_pred CCcCCCcccccccccc
Q 037111 548 HNNLSGSIPTNFENMH 563 (964)
Q Consensus 548 ~N~l~~~~~~~~~~l~ 563 (964)
+|++++.+|..|..++
T Consensus 293 ~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 293 GNPLSERTLQALREIT 308 (622)
T ss_dssp SCCCCHHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHhcc
Confidence 5555555555554443
No 320
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=2.9e-30 Score=310.05 Aligned_cols=421 Identities=15% Similarity=0.119 Sum_probs=206.1
Q ss_pred ccCCCCcccEEEccccccCCcc---c------------c-cCCCCCCCEEEcCCCCCCCCCCCCCC-CCCCCcEEEEecC
Q 037111 127 EIGLLTNLEVLHMFVNHLNGSI---P------------E-IGHLSSLKNLALDGNHLDGPIPVSIG-NLSSLVGLYLYNN 189 (964)
Q Consensus 127 ~~~~l~~L~~L~l~~n~l~~~~---~------------~-~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~N 189 (964)
.+..+++|++|+++++.....+ | . ...+++|++|+|++|.+++..+..+. .+++|++|+|++|
T Consensus 61 ~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~ 140 (594)
T 2p1m_B 61 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSC 140 (594)
T ss_dssp HHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCc
Confidence 3456777888888776422111 1 1 12455666666666666554444443 4566666666665
Q ss_pred -CCCCC-CCccccCCCCcchhhcccccccCCcccccc----Cccccceeeccccc--cCC-CChhhhhcccccceeeccc
Q 037111 190 -SLPGS-IPSSIGNLSNLVYLFLKKNHLRGPIPSSFG----YLRKLTKLELSNNQ--LSG-SIPQEIGNLKLLTDLSLSQ 260 (964)
Q Consensus 190 -~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~----~l~~L~~L~L~~N~--l~~-~~p~~~~~l~~L~~L~L~~ 260 (964)
.++.. ++..+.++++|++|+|++|.+++..+..+. .+++|++|++++|. ++. .++..+..+++|++|+|++
T Consensus 141 ~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~ 220 (594)
T 2p1m_B 141 EGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNR 220 (594)
T ss_dssp EEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCT
T ss_pred CCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCC
Confidence 33321 222233455666666666655544333322 34455555555554 110 0111122345555555555
Q ss_pred c-ccccccCCcccCccccceeeccc-------ccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeec
Q 037111 261 N-QLRGTVPSSLSNLSSLEILHLYD-------NQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHD 332 (964)
Q Consensus 261 N-~l~~~~p~~l~~l~~L~~L~L~~-------N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~ 332 (964)
| .+++ +|..+..+++|+.|+++. |.+.+ ++..+.++++|+.|. .+.+
T Consensus 221 ~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls-----------------------~~~~ 275 (594)
T 2p1m_B 221 AVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLS-----------------------GFWD 275 (594)
T ss_dssp TSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEE-----------------------CCBT
T ss_pred CCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCccccc-----------------------CCcc
Confidence 5 3332 444445555555555322 22222 222344444444441 1111
Q ss_pred ccccccccccccCCCcCCeeecCCCccccccC-cccCCCCCCcEEEccCCeeccccCccc-cCCCccceEeecc------
Q 037111 333 NYFIGSLPKTLRNCTSLERVRLEKNQLIGNIS-DDFGIYPNLKLFDLSYNKFYGELSSNW-WNCPQLGILKIAG------ 404 (964)
Q Consensus 333 n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~~~~~-~~~~~L~~L~L~~------ 404 (964)
.. .+.++..+..+++|+.|++++|.+++... ..+..+++|+.|++++| +.+.....+ ..+++|++|++.+
T Consensus 276 ~~-~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~ 353 (594)
T 2p1m_B 276 AV-PAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVM 353 (594)
T ss_dssp CC-GGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCS
T ss_pred cc-hhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCccccc
Confidence 11 11233333345556666666555443221 12334556666666655 332211111 2355566666532
Q ss_pred ---cccCCCCCCCC-cccccCcEEeccCCcccccCCcccc-ccCCcceeecc--c----ccccCC-----CchhhhccCC
Q 037111 405 ---NNITGGIPPEI-GNATQLHELDFSSNHLVGKVPLELA-NLTSLNDLILN--G----NQLSGG-----IPPELGLLTD 468 (964)
Q Consensus 405 ---n~i~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~l~-~l~~L~~L~L~--~----N~l~~~-----~~~~~~~l~~ 468 (964)
+.+++.....+ ..+++|+.|+++.|.+++..+..+. .+++|+.|+|+ + |.+++. ++..+..+++
T Consensus 354 ~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~ 433 (594)
T 2p1m_B 354 EPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKD 433 (594)
T ss_dssp SCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTT
T ss_pred ccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCC
Confidence 22221111111 1256666666666666654444443 35667777776 3 444421 1122455667
Q ss_pred CCceecccCccccccCCCccc-ccccceecCCccccCccchhhh-hccccCCeecccCccccCCCCh-hcccccccceee
Q 037111 469 LGYLDLSANRFSKSIPGNMGY-LLKLHYLNMSSNEFSQEIPIQL-GKLVQLSELDLSHNLLRGEIPP-EICNLESLEKLN 545 (964)
Q Consensus 469 L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~ 545 (964)
|+.|+|++ .+++..+..+.. +++|++|+|++|.+++..+..+ ..+++|+.|+|++|.+++.... .+..+++|+.|+
T Consensus 434 L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~ 512 (594)
T 2p1m_B 434 LRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLW 512 (594)
T ss_dssp CCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEE
T ss_pred ccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEe
Confidence 77777765 555444444443 5667777777777765544444 5567777777777776543333 233466777777
Q ss_pred ccCCcCCCcccccc-cccccceEEEecCCcc
Q 037111 546 LSHNNLSGSIPTNF-ENMHGLLSIDISYNEL 575 (964)
Q Consensus 546 Ls~N~l~~~~~~~~-~~l~~L~~l~ls~N~l 575 (964)
|++|+++......+ ..++.|+...+..+.-
T Consensus 513 l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 513 MSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp EESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred eeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 77777654333334 4456666555555443
No 321
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=3.6e-28 Score=285.84 Aligned_cols=186 Identities=19% Similarity=0.146 Sum_probs=132.3
Q ss_pred eecCCceeEEEE-EeCCCCeEEEEEecccc--------CchhhHHHHHHHHHHHhCC-CCCceeeEEeeeecCceeEEEE
Q 037111 697 IGRGGYGSVYKA-ELPSGDTVAVKKLHSFT--------GETTHQKEFLSEIKALTGV-RHRNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 697 lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~--------~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 766 (964)
.+.|++|.+..+ +.-.|+.||+|.+.... ..+...++|.+|+++|+++ +|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 455666655554 23358899999986532 1233346799999999999 6999999999999999999999
Q ss_pred EeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCC
Q 037111 767 EYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDS 846 (964)
Q Consensus 767 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 846 (964)
||++||+|.+++...+ +++.. +|+.||+.||+|+|++ |||||||||+|||++.+|.+||+|||+|+......
T Consensus 322 Eyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp ECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred ecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 9999999999997543 35543 5889999999999999 99999999999999999999999999998877665
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCC
Q 037111 847 SNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHP 891 (964)
Q Consensus 847 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p 891 (964)
......+||+.|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 394 ~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 394 SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 55667789999999999876 467789999999998887665444
No 322
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=7.6e-30 Score=306.36 Aligned_cols=457 Identities=15% Similarity=0.141 Sum_probs=230.4
Q ss_pred CceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCcccc---CCCcc------------ccCCCCcC
Q 037111 47 PCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYG---NIPSP------------IGNLTKLK 111 (964)
Q Consensus 47 ~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~---~~p~~------------~~~l~~L~ 111 (964)
|++|.++... ....+++.... +..+...+..+++|+.|+|+++.... ..|.. ...+++|+
T Consensus 34 ck~W~~~~~~---~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~ 108 (594)
T 2p1m_B 34 CKSWYEIERW---CRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLE 108 (594)
T ss_dssp CHHHHHHHHH---HCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred HHHHHHhhhh---hceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCC
Confidence 4479998322 22344554321 11111123457889999998875321 22221 24677888
Q ss_pred eeecccCCccCcCCcccC-CCCcccEEEcccc-ccCCc-ccc-cCCCCCCCEEEcCCCCCCCCCCCCC----CCCCCCcE
Q 037111 112 FLNLSSNHFSGKIPSEIG-LLTNLEVLHMFVN-HLNGS-IPE-IGHLSSLKNLALDGNHLDGPIPVSI----GNLSSLVG 183 (964)
Q Consensus 112 ~L~Ls~n~l~~~~p~~~~-~l~~L~~L~l~~n-~l~~~-~~~-~~~l~~L~~L~L~~n~l~~~~p~~~----~~l~~L~~ 183 (964)
+|+|++|.+++..+..+. .+++|++|+|++| .++.. ++. ...+++|++|+|++|.+++..+..+ ..+++|++
T Consensus 109 ~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~ 188 (594)
T 2p1m_B 109 EIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVS 188 (594)
T ss_dssp EEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCE
T ss_pred eEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcE
Confidence 888888888776666665 6788888888877 44431 333 3467888888888888765443333 35567777
Q ss_pred EEEecCCCCCCCC-cc----ccCCCCcchhhcccc-cccCCccccccCccccceeeccccccCCCChhhhhcccccceee
Q 037111 184 LYLYNNSLPGSIP-SS----IGNLSNLVYLFLKKN-HLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLS 257 (964)
Q Consensus 184 L~L~~N~l~~~~p-~~----~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 257 (964)
|++++|. . .+. .. +.++++|++|+|++| .+++ ++..+..+++|++|+++.+...
T Consensus 189 L~l~~~~-~-~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~----------------- 248 (594)
T 2p1m_B 189 LNISCLA-S-EVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAE----------------- 248 (594)
T ss_dssp EECTTCC-S-CCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCC-----------------
T ss_pred EEecccC-C-cCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCc-----------------
Confidence 7777775 1 111 11 123455555555555 3332 4445555555555553322110
Q ss_pred ccccccccccCCcccCcccccee-ecccccccccCCcccccCccccEEEeeCccCcccCCcc-cccCCcceEEEeecccc
Q 037111 258 LSQNQLRGTVPSSLSNLSSLEIL-HLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQN-ICQSGSLQYFSVHDNYF 335 (964)
Q Consensus 258 L~~N~l~~~~p~~l~~l~~L~~L-~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~~L~~L~l~~n~l 335 (964)
++.|.+.+ ++..+.++++|+.| .+.+... +.++..+..+++|++|++++|.+++..... +..+++|+.|++++| +
T Consensus 249 ~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~ 325 (594)
T 2p1m_B 249 VRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-I 325 (594)
T ss_dssp CCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-G
T ss_pred cchhhHHH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-c
Confidence 12222222 22234444444444 2222211 123333334445555555555443221111 223444555555444 2
Q ss_pred cc-cccccccCCCcCCeeecCC---------CccccccCcccC-CCCCCcEEEccCCeeccccCcccc-CCCccceEeec
Q 037111 336 IG-SLPKTLRNCTSLERVRLEK---------NQLIGNISDDFG-IYPNLKLFDLSYNKFYGELSSNWW-NCPQLGILKIA 403 (964)
Q Consensus 336 ~~-~~p~~l~~l~~L~~L~L~~---------N~l~~~~~~~~~-~l~~L~~L~Ls~N~i~~~~~~~~~-~~~~L~~L~L~ 403 (964)
.. .++.....+++|++|++.+ +.+++.....+. .+++|+.|+++.|.+++.....+. .+++|+.|+++
T Consensus 326 ~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 326 EDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred CHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 21 1222223355566665522 333332222222 245666666655555543333332 24455555554
Q ss_pred ccccCCCCCCCCcccccCcEEeccCCcccc-----cCCccccccCCcceeecccccccCCCchhhhc-cCCCCceecccC
Q 037111 404 GNNITGGIPPEIGNATQLHELDFSSNHLVG-----KVPLELANLTSLNDLILNGNQLSGGIPPELGL-LTDLGYLDLSAN 477 (964)
Q Consensus 404 ~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-----~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~Ls~N 477 (964)
.+...+ .|.+++ .++..+..+++|+.|+|++ .+++..+..+.. +++|++|+|++|
T Consensus 406 ~~~~~~------------------~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~ 466 (594)
T 2p1m_B 406 IIEPKA------------------PDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFA 466 (594)
T ss_dssp ESSTTC------------------CCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred cccCCC------------------cccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCC
Confidence 110000 022221 1111244556666666655 455444444444 666777777777
Q ss_pred ccccccCCCc-ccccccceecCCccccCccchh-hhhccccCCeecccCccccCCCChhc-ccccccceeeccCCc
Q 037111 478 RFSKSIPGNM-GYLLKLHYLNMSSNEFSQEIPI-QLGKLVQLSELDLSHNLLRGEIPPEI-CNLESLEKLNLSHNN 550 (964)
Q Consensus 478 ~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~ 550 (964)
.+++..+..+ ..+++|++|+|++|.+++.... .+..+++|+.|++++|+++......+ ..++.|+...+..+.
T Consensus 467 ~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 467 GDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp CSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred CCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 7655444443 4567777777777777554443 33457778888888887753333333 345666666666553
No 323
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.5e-27 Score=277.02 Aligned_cols=235 Identities=20% Similarity=0.217 Sum_probs=117.6
Q ss_pred cceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcC
Q 037111 84 SHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALD 163 (964)
Q Consensus 84 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~ 163 (964)
++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.+| ++.+++|++|+|++|.+++.++ .++|++|+|+
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~----~~~L~~L~L~ 107 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV----GPSIETLHAA 107 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE----CTTCCEEECC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC----CCCcCEEECc
Confidence 355555555555555445555555555555555555554333 5555555555555555543332 1445555555
Q ss_pred CCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCC
Q 037111 164 GNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSI 243 (964)
Q Consensus 164 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 243 (964)
+|.+++..+. .+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..
T Consensus 108 ~N~l~~~~~~---------------------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (487)
T 3oja_A 108 NNNISRVSCS---------------------------RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (487)
T ss_dssp SSCCCCEEEC---------------------------CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEE
T ss_pred CCcCCCCCcc---------------------------ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcC
Confidence 5555443332 2244455555555555444444555555555555555555444
Q ss_pred hhhhh-cccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccC
Q 037111 244 PQEIG-NLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQS 322 (964)
Q Consensus 244 p~~~~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 322 (964)
|..+. .+++|++|+|++|.|++..+ +..+++|++|+|++|++++. |..+..+++|+.|+|++|.+++ +|..+..+
T Consensus 161 ~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l 236 (487)
T 3oja_A 161 FAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFS 236 (487)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCC
T ss_pred hHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccC
Confidence 44443 45555555555555553321 22355555555555555532 2335555555555555555553 23334444
Q ss_pred CcceEEEeeccccc-ccccccccCCCcCCeeecC
Q 037111 323 GSLQYFSVHDNYFI-GSLPKTLRNCTSLERVRLE 355 (964)
Q Consensus 323 ~~L~~L~l~~n~l~-~~~p~~l~~l~~L~~L~L~ 355 (964)
++|+.|++++|.+. +.+|..+..++.|+.++++
T Consensus 237 ~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 44444444444443 3445555556666655554
No 324
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=2.6e-27 Score=274.97 Aligned_cols=235 Identities=21% Similarity=0.230 Sum_probs=153.3
Q ss_pred ccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEc
Q 037111 299 MNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDL 378 (964)
Q Consensus 299 ~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 378 (964)
++|+.|+|++|.+++..|..+. .+++|+.|+|++|.+++..+ |..+++|+.|+|
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~------------------------~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 87 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLA------------------------PFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGT------------------------TCTTCCEEECTTSCCEEEEE--CTTCTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHh------------------------CCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEe
Confidence 3566666666666655444444 44444444444444444332 444555555555
Q ss_pred cCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCC
Q 037111 379 SYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGG 458 (964)
Q Consensus 379 s~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 458 (964)
++|+|++..+ .++|+.|++++|.|++..+. .+++|+.|+|++|.+++..|..++.+++|+.|+|++|.+++.
T Consensus 88 s~N~l~~l~~-----~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 159 (487)
T 3oja_A 88 NNNYVQELLV-----GPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV 159 (487)
T ss_dssp CSSEEEEEEE-----CTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEE
T ss_pred cCCcCCCCCC-----CCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCc
Confidence 5555543321 24555555555555544333 245677778888887777777777778888888888888777
Q ss_pred Cchhhh-ccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhccc
Q 037111 459 IPPELG-LLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICN 537 (964)
Q Consensus 459 ~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 537 (964)
.|..+. .+++|+.|+|++|.+++..+ +..+++|++|+|++|+|++..| .+..+++|+.|+|++|.|++ +|..+..
T Consensus 160 ~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~ 235 (487)
T 3oja_A 160 NFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRF 235 (487)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCC
T ss_pred ChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhcc
Confidence 776665 67788888888888776533 3347778888888888876444 47777888888888888874 6666777
Q ss_pred ccccceeeccCCcCC-CcccccccccccceEEEec
Q 037111 538 LESLEKLNLSHNNLS-GSIPTNFENMHGLLSIDIS 571 (964)
Q Consensus 538 l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~l~ls 571 (964)
+++|+.|+|++|++. +.+|..+..++.|+.++++
T Consensus 236 l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 788888888888877 5666777777777776665
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=7.6e-26 Score=243.10 Aligned_cols=218 Identities=23% Similarity=0.220 Sum_probs=136.3
Q ss_pred CCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCC
Q 037111 77 QFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLS 155 (964)
Q Consensus 77 ~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~ 155 (964)
.+|-...++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..++.+++|++|+|++|.+++..+. +..++
T Consensus 21 ~ip~~l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 100 (276)
T 2z62_A 21 KIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLS 100 (276)
T ss_dssp SCCSSSCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCT
T ss_pred ccCCCCCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCc
Confidence 34544556788888888888876666788888888888888888766666677777777777777777665543 66666
Q ss_pred CCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCC-CCccccCCCCcchhhcccccccCCccccccCccccceeec
Q 037111 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS-IPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLEL 234 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 234 (964)
+|++|++++|++++..+..++++++|++|++++|++++. +|..++++++|++|+|++|++++..+..|..+.+|+.|++
T Consensus 101 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l 180 (276)
T 2z62_A 101 SLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 180 (276)
T ss_dssp TCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCE
T ss_pred cccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccce
Confidence 666676666666655555566666666666666666542 3555555555555555555555444444444444441100
Q ss_pred cccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCccc
Q 037111 235 SNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGF 314 (964)
Q Consensus 235 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 314 (964)
.|++++|++++..+..+. ..+|+.|+|++|++++..+..+..+++|+.|++++|++++.
T Consensus 181 --------------------~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 181 --------------------SLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp --------------------EEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred --------------------eeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 566666666643333332 33566666666666655455556666666666666666644
Q ss_pred C
Q 037111 315 L 315 (964)
Q Consensus 315 ~ 315 (964)
.
T Consensus 240 c 240 (276)
T 2z62_A 240 C 240 (276)
T ss_dssp T
T ss_pred C
Confidence 3
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.8e-25 Score=240.14 Aligned_cols=211 Identities=24% Similarity=0.265 Sum_probs=165.7
Q ss_pred CCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecc
Q 037111 372 NLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILN 451 (964)
Q Consensus 372 ~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~ 451 (964)
+|+.|++++|++++..+..+.++++|++|++++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 46666666666665555566666666666666666666666677777888888888888877777778888888888888
Q ss_pred cccccCCCchhhhccCCCCceecccCccccc-cCCCcccccccceecCCccccCccchhhhhccccCC----eecccCcc
Q 037111 452 GNQLSGGIPPELGLLTDLGYLDLSANRFSKS-IPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLS----ELDLSHNL 526 (964)
Q Consensus 452 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~Ls~N~ 526 (964)
+|.+++..+..++.+++|++|++++|.+++. +|..|..+++|++|+|++|++++..+..+..+.+|+ .|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 8888766666778888888888888888764 477888888899999999998887777888887777 89999999
Q ss_pred ccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCCCc
Q 037111 527 LRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPSIE 583 (964)
Q Consensus 527 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~~~ 583 (964)
+++..+..+. ..+|+.|+|++|+|++..+..|..+++|+.|++++|+++|..|...
T Consensus 189 l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l~ 244 (276)
T 2z62_A 189 MNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 244 (276)
T ss_dssp CCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTTH
T ss_pred ccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCchH
Confidence 9865555444 4589999999999998888888999999999999999999887653
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=4.2e-26 Score=244.25 Aligned_cols=202 Identities=28% Similarity=0.349 Sum_probs=115.1
Q ss_pred cCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEE
Q 037111 82 LFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLA 161 (964)
Q Consensus 82 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~ 161 (964)
.+..+..+++..+.+.+. ..+..+++|+.|++++|.++ .++ .++.+++|++|++++|.+++ ++.++.+++|++|+
T Consensus 17 ~~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~ 91 (272)
T 3rfs_A 17 AFAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-ISALKELTNLTYLI 91 (272)
T ss_dssp HHHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-CGGGTTCTTCCEEE
T ss_pred hHHHHHHHHhcCcccccc--cccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-chhhcCCCCCCEEE
Confidence 345555666666666543 23456666777777776665 222 35566666666666666655 24556666666666
Q ss_pred cCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCC
Q 037111 162 LDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG 241 (964)
Q Consensus 162 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 241 (964)
|++|.+++..+..++++++|++|+|++|++++..+..|+++++|++|+|++|++++..+..|+.+++|++|++++|++++
T Consensus 92 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 92 LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 66666665555555666666666666666665555555555556666666665555555555555555555555555554
Q ss_pred CChhhhhcccccceeeccccccccccCCcccCccccceeeccccccc
Q 037111 242 SIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288 (964)
Q Consensus 242 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 288 (964)
..+..++.+++|++|+|++|++++..+..+..+++|++|++++|++.
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 218 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcc
Confidence 44444555555555555555555444444455555555555555444
No 328
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.3e-24 Score=230.58 Aligned_cols=187 Identities=23% Similarity=0.244 Sum_probs=147.1
Q ss_pred CccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceec
Q 037111 395 PQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDL 474 (964)
Q Consensus 395 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 474 (964)
++++.|+|++|.+++..+..|.++++|++|+|++|+++...+..|..+++|++|+|++|.+++..+..+..+++|++|+|
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 34555555555555555566777777777777777777655556677777888888888877666667777888888888
Q ss_pred ccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCc
Q 037111 475 SANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGS 554 (964)
Q Consensus 475 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 554 (964)
++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|+|++.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRV 196 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcC
Confidence 88888877777788888888888888888877777788888899999999988877677788889999999999999877
Q ss_pred ccccccccccceEEEecCCcccccCCC
Q 037111 555 IPTNFENMHGLLSIDISYNELDGPIPS 581 (964)
Q Consensus 555 ~~~~~~~l~~L~~l~ls~N~l~~~~~~ 581 (964)
.+..|..+++|+.|++++|++.+..+.
T Consensus 197 ~~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 197 PEGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred CHHHhccccCCCEEEecCCCeeCCCcc
Confidence 777888899999999999998887653
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.9e-24 Score=233.10 Aligned_cols=202 Identities=25% Similarity=0.253 Sum_probs=118.3
Q ss_pred CcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEE
Q 037111 81 SLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNL 160 (964)
Q Consensus 81 ~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L 160 (964)
+.+++++.+++++|+++ .+|..+. +++++|+|++|.|++..|..+..+++|++|+|++|.+++..+ .+.+++|++|
T Consensus 7 ~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L 82 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-DGTLPVLGTL 82 (290)
T ss_dssp ECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-CSCCTTCCEE
T ss_pred cccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-CCCCCcCCEE
Confidence 34456666666666666 3555443 566677777777666556666666666666666666665433 2556666666
Q ss_pred EcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccC
Q 037111 161 ALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240 (964)
Q Consensus 161 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 240 (964)
+|++|+++ .+|..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|+|+
T Consensus 83 ~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 161 (290)
T 1p9a_G 83 DLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161 (290)
T ss_dssp ECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS
T ss_pred ECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC
Confidence 66666666 45556666666666666666666554555666666666666666666555555555555555555555555
Q ss_pred CCChhhhhcccccceeeccccccccccCCcccCccccceeeccccccc
Q 037111 241 GSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288 (964)
Q Consensus 241 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 288 (964)
+..+..|..+++|++|+|++|+|+ .+|..+..+.+|+.|+|++|++.
T Consensus 162 ~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 162 ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 444444455555555555555555 34444444445555555555443
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.5e-24 Score=232.18 Aligned_cols=211 Identities=25% Similarity=0.277 Sum_probs=189.6
Q ss_pred ccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCC
Q 037111 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSL 157 (964)
Q Consensus 79 ~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L 157 (964)
....+++|+.|++++|.++. + +.+..+++|++|+|++|.+++ + +.++.+++|++|++++|.+++.++. ++.+++|
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 111 (272)
T 3rfs_A 36 TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNL 111 (272)
T ss_dssp CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCC
Confidence 34567899999999999974 3 468999999999999999986 3 4789999999999999999988876 7899999
Q ss_pred CEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeecccc
Q 037111 158 KNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNN 237 (964)
Q Consensus 158 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 237 (964)
++|+|++|++++..+..++++++|++|++++|++++..+..++++++|++|+|++|++++..+..|+.+++|++|+|++|
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 99999999999888888999999999999999999887778899999999999999999888888999999999999999
Q ss_pred ccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCcc
Q 037111 238 QLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMN 300 (964)
Q Consensus 238 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 300 (964)
++++..|..+..+++|++|+|++|.+.+. +++|+.|++..|.++|.+|..++.+..
T Consensus 192 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 192 QLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred cCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 99988888899999999999999998754 457899999999999999988877654
No 331
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=2.9e-24 Score=227.01 Aligned_cols=192 Identities=29% Similarity=0.321 Sum_probs=154.4
Q ss_pred CCCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcC
Q 037111 45 TTPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKI 124 (964)
Q Consensus 45 ~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 124 (964)
.+||.|.|++|... ...+++++++++ .+|.+..++++.|+|++|.+++..|..|+++++|++|+|++|.|++..
T Consensus 2 ~~Cp~~~gC~C~~~--~~~l~~~~~~l~----~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 75 (251)
T 3m19_A 2 KTCETVTGCTCNEG--KKEVDCQGKSLD----SVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLS 75 (251)
T ss_dssp --CHHHHSSEEEGG--GTEEECTTCCCS----SCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCC
T ss_pred ccCCCCCceEcCCC--CeEEecCCCCcc----ccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccC
Confidence 36889999999632 235677777665 445556678999999999998888888899999999999999998877
Q ss_pred CcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCC
Q 037111 125 PSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLS 203 (964)
Q Consensus 125 p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 203 (964)
|..+..+++|++|+|++|++++.++. +..+++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..|++++
T Consensus 76 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 155 (251)
T 3m19_A 76 AGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLT 155 (251)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred HhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCc
Confidence 77788888888888888888877765 67888888888888888877666778888888888888888866666788888
Q ss_pred CcchhhcccccccCCccccccCccccceeeccccccCCC
Q 037111 204 NLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGS 242 (964)
Q Consensus 204 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 242 (964)
+|++|+|++|++++..+..|..+++|++|+|++|.+++.
T Consensus 156 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 156 NLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 888888888888877777788888888888888888754
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=4.1e-24 Score=230.54 Aligned_cols=204 Identities=25% Similarity=0.250 Sum_probs=181.6
Q ss_pred cccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCC
Q 037111 103 PIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSL 181 (964)
Q Consensus 103 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 181 (964)
.++++++++.+++++|+++ .+|..+. ++|++|+|++|.+++..+. +..+++|++|+|++|++++..+ . +.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcC
Confidence 4788999999999999998 6787664 7899999999999988764 8999999999999999996543 3 789999
Q ss_pred cEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeecccc
Q 037111 182 VGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQN 261 (964)
Q Consensus 182 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 261 (964)
++|+|++|+++ .+|..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 99999999998 77888999999999999999999888889999999999999999999887788889999999999999
Q ss_pred ccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcc
Q 037111 262 QLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTG 313 (964)
Q Consensus 262 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 313 (964)
+|++..+..+..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|++..
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 999666667788999999999999998 678888888899999999998863
No 333
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=1.3e-24 Score=237.62 Aligned_cols=223 Identities=21% Similarity=0.236 Sum_probs=157.6
Q ss_pred ceeEEeccCCccccC-CCc--cccCCCCcCeeecccCCccCcCCccc--CCCCcccEEEccccccCCcccc-----cCCC
Q 037111 85 HLSYLDLNENQLYGN-IPS--PIGNLTKLKFLNLSSNHFSGKIPSEI--GLLTNLEVLHMFVNHLNGSIPE-----IGHL 154 (964)
Q Consensus 85 ~L~~L~l~~n~l~~~-~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~l~~n~l~~~~~~-----~~~l 154 (964)
.++.|.+.++.++.. +.. .+..+++|++|+|++|.+++.+|..+ +.+++|++|+|++|.+++..+. +..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 356677777666431 111 12235668888888888888888877 8888888888888888875542 3467
Q ss_pred CCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCC--C--CccccCCCCcchhhcccccccCCccc----cccCc
Q 037111 155 SSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS--I--PSSIGNLSNLVYLFLKKNHLRGPIPS----SFGYL 226 (964)
Q Consensus 155 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l 226 (964)
++|++|+|++|++++..|..++.+++|++|+|++|++.+. + +..++.+++|++|+|++|+++.. +. .++.+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETP-TGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCH-HHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCch-HHHHHHHHhcC
Confidence 8888888888888877778888888888888888887642 1 22346777888888888887632 22 24667
Q ss_pred cccceeeccccccCCCChhhhhcc---cccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccE
Q 037111 227 RKLTKLELSNNQLSGSIPQEIGNL---KLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNS 303 (964)
Q Consensus 227 ~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 303 (964)
++|++|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 778888888888877666666665 57788888888877 5666554 6777788888877743 33 566777777
Q ss_pred EEeeCccCcc
Q 037111 304 LSVGGNQFTG 313 (964)
Q Consensus 304 L~l~~N~l~~ 313 (964)
|++++|+|+.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 7777777763
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=7.5e-24 Score=222.18 Aligned_cols=197 Identities=20% Similarity=0.167 Sum_probs=120.1
Q ss_pred cCcceeEEeccCCccccCCCccccCCCCcCeeecccCC-ccCcCCcccCCCCcccEEEccc-cccCCcccc-cCCCCCCC
Q 037111 82 LFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNH-FSGKIPSEIGLLTNLEVLHMFV-NHLNGSIPE-IGHLSSLK 158 (964)
Q Consensus 82 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~~~~l~~L~~L~l~~-n~l~~~~~~-~~~l~~L~ 158 (964)
..++|++|+|++|++++..+..|+++++|++|+|++|. +++..+..|+.+++|++|++++ |++++..+. +..+++|+
T Consensus 29 ~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~ 108 (239)
T 2xwt_C 29 LPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLK 108 (239)
T ss_dssp CCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCC
T ss_pred CCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCC
Confidence 44578888888888887666678888888888888886 7755555677777777777776 777665543 56666677
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCc---EEEEecC-CCCCCCCccccCCCCcc-hhhcccccccCCccccccCccccceee
Q 037111 159 NLALDGNHLDGPIPVSIGNLSSLV---GLYLYNN-SLPGSIPSSIGNLSNLV-YLFLKKNHLRGPIPSSFGYLRKLTKLE 233 (964)
Q Consensus 159 ~L~L~~n~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~ 233 (964)
+|++++|++++ +|. ++.+++|+ +|++++| ++++..+..|.++++|+ +|++++|+++.+.+..|.. ++|++|+
T Consensus 109 ~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~ 185 (239)
T 2xwt_C 109 FLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVY 185 (239)
T ss_dssp EEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEE
T ss_pred EEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEE
Confidence 77777766664 444 66666665 6666666 66644444566666666 6666666665333333333 4555555
Q ss_pred ccccc-cCCCChhhhhcc-cccceeeccccccccccCCcccCccccceeeccc
Q 037111 234 LSNNQ-LSGSIPQEIGNL-KLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYD 284 (964)
Q Consensus 234 L~~N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 284 (964)
|++|+ +++..+..|..+ ++|+.|++++|++++ +|.. .+++|+.|++++
T Consensus 186 L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~ 235 (239)
T 2xwt_C 186 LNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARN 235 (239)
T ss_dssp CTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTT
T ss_pred cCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccC
Confidence 55553 554444445555 555555555555552 2222 334444444443
No 335
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=8.9e-25 Score=255.60 Aligned_cols=185 Identities=14% Similarity=0.170 Sum_probs=146.3
Q ss_pred cccceeecCCceeEEEEEeCCCCeEEEEEeccccCc------hhhHHHHHHHHHHHhCCCCCceeeEEeeeecCceeEEE
Q 037111 692 DESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGE------TTHQKEFLSEIKALTGVRHRNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 692 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 765 (964)
...+.||+|+||.||+|+. .++.+++|+....... ....+.+.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3456899999999999965 4788999986542211 11235589999999999999999666666677788999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCC
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPD 845 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 845 (964)
|||+++|+|.+++.. +..++.|+++||+|||++ +|+||||||+||+++. .+||+|||+++.....
T Consensus 418 mE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 418 MSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 999999999999965 457999999999999999 9999999999999998 9999999999887543
Q ss_pred CCC-------cccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCC
Q 037111 846 SSN-------WSELAGTYGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGQHPK 892 (964)
Q Consensus 846 ~~~-------~~~~~g~~~y~aPE~~~~--~~~~~~sDvwSlGvll~el~tg~~p~ 892 (964)
... .....||+.|||||++.. ..|+..+|+||...-..+.+.++.+|
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 221 135579999999999986 56888899999999888888877665
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=3.4e-25 Score=247.79 Aligned_cols=251 Identities=17% Similarity=0.199 Sum_probs=151.2
Q ss_pred EeecccccccccccccCCCcCCeeecCCCccccccC----cccCCCC-CCcEEEccCCeeccccCccccCC-----Cccc
Q 037111 329 SVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNIS----DDFGIYP-NLKLFDLSYNKFYGELSSNWWNC-----PQLG 398 (964)
Q Consensus 329 ~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~----~~~~~l~-~L~~L~Ls~N~i~~~~~~~~~~~-----~~L~ 398 (964)
.++.|.+.+.+|..+...++|++|+|++|.+++..+ ..|..++ +|+.|+|++|++++..+..+..+ ++|+
T Consensus 4 ~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 83 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVT 83 (362)
T ss_dssp ECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCC
T ss_pred ccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCcc
Confidence 344444444444444444445555555555555444 4444455 55555555555555444444432 5566
Q ss_pred eEeecccccCCCCCCCCcc----c-ccCcEEeccCCcccccCCccccc-----cCCcceeecccccccCCCch----hhh
Q 037111 399 ILKIAGNNITGGIPPEIGN----A-TQLHELDFSSNHLVGKVPLELAN-----LTSLNDLILNGNQLSGGIPP----ELG 464 (964)
Q Consensus 399 ~L~L~~n~i~~~~~~~~~~----l-~~L~~L~Ls~N~l~~~~~~~l~~-----l~~L~~L~L~~N~l~~~~~~----~~~ 464 (964)
+|+|++|.+++..+..+.. + ++|++|+|++|+|++..+..+.. .++|++|+|++|.+++..+. .+.
T Consensus 84 ~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~ 163 (362)
T 3goz_A 84 SLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILA 163 (362)
T ss_dssp EEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHh
Confidence 6666666655444443332 2 67777777777776555544332 25777777777777754333 334
Q ss_pred ccC-CCCceecccCccccccCCCccc----c-cccceecCCccccCcc----chhhhhcc-ccCCeecccCccccCCCCh
Q 037111 465 LLT-DLGYLDLSANRFSKSIPGNMGY----L-LKLHYLNMSSNEFSQE----IPIQLGKL-VQLSELDLSHNLLRGEIPP 533 (964)
Q Consensus 465 ~l~-~L~~L~Ls~N~l~~~~~~~~~~----l-~~L~~L~Ls~N~l~~~----~~~~~~~l-~~L~~L~Ls~N~l~~~~~~ 533 (964)
.++ +|++|+|++|++++..+..+.. + ++|++|+|++|+|++. ++..+..+ ++|+.|+|++|+|++..+.
T Consensus 164 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~ 243 (362)
T 3goz_A 164 AIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLE 243 (362)
T ss_dssp TSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHH
T ss_pred cCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHH
Confidence 444 7777788887777665544433 3 5788888888887653 44455553 4788888888888765442
Q ss_pred ----hcccccccceeeccCCcCCCc-------ccccccccccceEEEecCCcccccC
Q 037111 534 ----EICNLESLEKLNLSHNNLSGS-------IPTNFENMHGLLSIDISYNELDGPI 579 (964)
Q Consensus 534 ----~~~~l~~L~~L~Ls~N~l~~~-------~~~~~~~l~~L~~l~ls~N~l~~~~ 579 (964)
.+..+++|+.|+|++|.+++. ++..+..+++|+.||+++|++....
T Consensus 244 ~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~ 300 (362)
T 3goz_A 244 NLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSH 300 (362)
T ss_dssp HHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGG
T ss_pred HHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcc
Confidence 345667888888888875433 3346777888888888888887653
No 337
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=1.6e-25 Score=248.10 Aligned_cols=266 Identities=16% Similarity=0.163 Sum_probs=131.5
Q ss_pred CceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcC--cceeEEeccCCccccCCCccccCCCCcCeeecccCCccCc-
Q 037111 47 PCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLF--SHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGK- 123 (964)
Q Consensus 47 ~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~--~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~- 123 (964)
|..|.++.|+ ...++.++++++.+... .+..+ +.++.|++++|.+++..|. +..+++|++|+|++|.+++.
T Consensus 36 c~~W~~~~~~-~~~~~~l~l~~~~~~~~----~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~ 109 (336)
T 2ast_B 36 CKRWYRLASD-ESLWQTLDLTGKNLHPD----VTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVST 109 (336)
T ss_dssp CHHHHHHHTC-STTSSEEECTTCBCCHH----HHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHH
T ss_pred HHHHHHHhcC-chhheeeccccccCCHH----HHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHH
Confidence 4479999986 33456666665544311 12222 4566666666666554433 34556666666666655543
Q ss_pred CCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCC-CCCCC-CCCCCCCCCCCcEEEEecC-CCCCCCCccc
Q 037111 124 IPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGN-HLDGP-IPVSIGNLSSLVGLYLYNN-SLPGSIPSSI 199 (964)
Q Consensus 124 ~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~ 199 (964)
+|..+..+++|++|+|++|.+++..+. ++.+++|++|+|++| .+++. ++..+.++++|++|++++| .+++.
T Consensus 110 ~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~----- 184 (336)
T 2ast_B 110 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK----- 184 (336)
T ss_dssp HHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH-----
T ss_pred HHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH-----
Confidence 555555555555555555555543332 444555555555555 34431 3333444455555555555 44422
Q ss_pred cCCCCcchhhcccccccCCccccccCcc-ccceeecccc--ccC-CCChhhhhcccccceeeccccc-cccccCCcccCc
Q 037111 200 GNLSNLVYLFLKKNHLRGPIPSSFGYLR-KLTKLELSNN--QLS-GSIPQEIGNLKLLTDLSLSQNQ-LRGTVPSSLSNL 274 (964)
Q Consensus 200 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N--~l~-~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l 274 (964)
.++..+..++ +|++|+|++| .++ +.+|..+..+++|++|++++|. +++..+..+..+
T Consensus 185 ------------------~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l 246 (336)
T 2ast_B 185 ------------------HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQL 246 (336)
T ss_dssp ------------------HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGC
T ss_pred ------------------HHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCC
Confidence 0233444445 5555555555 232 2334444555555555555555 444444455555
Q ss_pred cccceeeccccc-ccccCCcccccCccccEEEeeCccCcccCCcccccC-CcceEEEeecccccccccccccC
Q 037111 275 SSLEILHLYDNQ-LSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQS-GSLQYFSVHDNYFIGSLPKTLRN 345 (964)
Q Consensus 275 ~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~~L~~L~l~~n~l~~~~p~~l~~ 345 (964)
++|++|++++|. +.......+..+++|+.|++++| ++.. .+..+ ..+..|++++|.+++..|..+.+
T Consensus 247 ~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 247 NYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp TTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEecccCccccCCcccc
Confidence 555555555553 22111123455555555555555 2221 22222 22444445566666555555443
No 338
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.3e-24 Score=243.12 Aligned_cols=261 Identities=19% Similarity=0.136 Sum_probs=158.9
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCC----ccccCCC-CcchhhcccccccCCccccccCc-----cc
Q 037111 159 NLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIP----SSIGNLS-NLVYLFLKKNHLRGPIPSSFGYL-----RK 228 (964)
Q Consensus 159 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~ 228 (964)
.++|++|+++|.+|..+...++|++|+|++|.+++..+ ..+.+++ +|++|+|++|++++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46788888888888777777778888888888886655 6677777 78888888888887767666665 77
Q ss_pred cceeeccccccCCCChhhhhcc-----cccceeeccccccccccCCccc----C-ccccceeecccccccccCC----cc
Q 037111 229 LTKLELSNNQLSGSIPQEIGNL-----KLLTDLSLSQNQLRGTVPSSLS----N-LSSLEILHLYDNQLSGHIP----QE 294 (964)
Q Consensus 229 L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~----~-l~~L~~L~L~~N~l~~~~~----~~ 294 (964)
|++|+|++|++++..+..+... ++|++|+|++|++++..+..+. . .++|++|+|++|++++..+ ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 8888888888877666655543 6788888888887755443332 2 2577777887777774332 33
Q ss_pred cccCc-cccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCC-CcCCeeecCCCccccccC----cccC
Q 037111 295 IGNFM-NLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNC-TSLERVRLEKNQLIGNIS----DDFG 368 (964)
Q Consensus 295 ~~~l~-~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~~----~~~~ 368 (964)
+..++ +|++|+|++|++++..+..++.. +..+ ++|+.|+|++|.+++... ..+.
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~--------------------l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKF--------------------LASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHH--------------------HHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHH--------------------HHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 34444 77777777777766555433322 2222 244444444444443211 1121
Q ss_pred C-CCCCcEEEccCCeeccccC----ccccCCCccceEeecccccCCC-------CCCCCcccccCcEEeccCCcccccCC
Q 037111 369 I-YPNLKLFDLSYNKFYGELS----SNWWNCPQLGILKIAGNNITGG-------IPPEIGNATQLHELDFSSNHLVGKVP 436 (964)
Q Consensus 369 ~-l~~L~~L~Ls~N~i~~~~~----~~~~~~~~L~~L~L~~n~i~~~-------~~~~~~~l~~L~~L~Ls~N~l~~~~~ 436 (964)
. .++|+.|+|++|++++... ..+..+++|+.|+|++|.+.+. ++..+..+++|++||+++|++.+..+
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 2 2345555555555544322 1223444555555555553322 22355667778888888887765544
Q ss_pred ccc
Q 037111 437 LEL 439 (964)
Q Consensus 437 ~~l 439 (964)
..+
T Consensus 302 ~~~ 304 (362)
T 3goz_A 302 IPI 304 (362)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 339
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=2.1e-23 Score=227.38 Aligned_cols=212 Identities=25% Similarity=0.366 Sum_probs=125.3
Q ss_pred ceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCC
Q 037111 85 HLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDG 164 (964)
Q Consensus 85 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~ 164 (964)
.+..+.+..+.+++.+ .+..+++|++|++++|.++ .+| .+..+++|++|++++|.+++..+ +..+++|++|+|++
T Consensus 20 ~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~ 94 (308)
T 1h6u_A 20 NAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSG 94 (308)
T ss_dssp HHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCS
T ss_pred HHHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChh-HccCCCCCEEEccC
Confidence 3344445555554432 2345666666666666665 344 45566666666666666665544 66666666666666
Q ss_pred CCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCCh
Q 037111 165 NHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIP 244 (964)
Q Consensus 165 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 244 (964)
|++++. +.++.+++|++|++++|++++. | .+..+++|++|+|++|++++..+ ++.+++|++|+|++|++++..+
T Consensus 95 n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~ 168 (308)
T 1h6u_A 95 NPLKNV--SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP 168 (308)
T ss_dssp CCCSCC--GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG
T ss_pred CcCCCc--hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh
Confidence 666642 2466666666666666666642 3 26666666666666666665433 5666666666666666664322
Q ss_pred hhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcc
Q 037111 245 QEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTG 313 (964)
Q Consensus 245 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 313 (964)
+..+++|+.|++++|++++..+ +..+++|++|+|++|++++.. .+..+++|+.|++++|++++
T Consensus 169 --l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 169 --LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp --GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred --hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 6666666666666666664322 566666666666666666433 25666666666666666654
No 340
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.89 E-value=8.2e-23 Score=209.30 Aligned_cols=184 Identities=26% Similarity=0.340 Sum_probs=134.0
Q ss_pred CCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCC
Q 037111 46 TPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIP 125 (964)
Q Consensus 46 ~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p 125 (964)
..|.|.+|.|+..+ +..+|.+.+++|++|+|++|++++..+..|+.+++|++|+|++|++++..+
T Consensus 5 C~C~~~~v~c~~~~---------------l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 69 (208)
T 2o6s_A 5 CSCSGTTVECYSQG---------------RTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPN 69 (208)
T ss_dssp CEEETTEEECCSSC---------------CSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCT
T ss_pred CEECCCEEEecCCC---------------ccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccCh
Confidence 34899999997432 224455667789999999999987666778889999999999999886555
Q ss_pred cccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCC
Q 037111 126 SEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSN 204 (964)
Q Consensus 126 ~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 204 (964)
..++.+++|++|+|++|++++.++. +..+++|++|+|++|++++..+..+.++++|++|+|++|++++..+..+..+++
T Consensus 70 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 149 (208)
T 2o6s_A 70 GVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 149 (208)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred hhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCC
Confidence 5677888888888888888776665 577777777777777777666666777777777777777777655555667777
Q ss_pred cchhhcccccccCCccccccCccccceeeccccccCCCChhhhhccc
Q 037111 205 LVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLK 251 (964)
Q Consensus 205 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 251 (964)
|++|+|++|.+.+ .+++|++|+++.|+++|.+|..++.++
T Consensus 150 L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 150 LQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp CCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 7777777776553 344566666666666666666665544
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.8e-23 Score=228.40 Aligned_cols=201 Identities=23% Similarity=0.241 Sum_probs=174.8
Q ss_pred CcceeEEeccCCccccCCCccc--cCCCCcCeeecccCCccCcCC----cccCCCCcccEEEccccccCCcccc-cCCCC
Q 037111 83 FSHLSYLDLNENQLYGNIPSPI--GNLTKLKFLNLSSNHFSGKIP----SEIGLLTNLEVLHMFVNHLNGSIPE-IGHLS 155 (964)
Q Consensus 83 ~~~L~~L~l~~n~l~~~~p~~~--~~l~~L~~L~Ls~n~l~~~~p----~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~ 155 (964)
++.|++|+|++|.+++.+|..+ +.+++|++|+|++|.+++..| ..+..+++|++|+|++|.+++.++. ++.++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 3569999999999999999988 999999999999999998666 4456899999999999999988875 89999
Q ss_pred CCCEEEcCCCCCCCC--C--CCCCCCCCCCcEEEEecCCCCCCCCc----cccCCCCcchhhcccccccCCccccccCc-
Q 037111 156 SLKNLALDGNHLDGP--I--PVSIGNLSSLVGLYLYNNSLPGSIPS----SIGNLSNLVYLFLKKNHLRGPIPSSFGYL- 226 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~~~~~~~l- 226 (964)
+|++|+|++|++.+. + +..++.+++|++|+|++|+++ .+|. .++++++|++|+|++|++++..|..+..+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 999999999998752 2 234578999999999999997 3443 25788999999999999999888888777
Q ss_pred --cccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccc
Q 037111 227 --RKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSG 289 (964)
Q Consensus 227 --~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 289 (964)
++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|+.|+|++|+++.
T Consensus 249 ~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 249 WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 69999999999999 6677664 8999999999999953 44 6888999999999999974
No 342
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=1.6e-22 Score=213.65 Aligned_cols=183 Identities=25% Similarity=0.278 Sum_probs=149.1
Q ss_pred ccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecc
Q 037111 396 QLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLS 475 (964)
Q Consensus 396 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 475 (964)
..+.++++++.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3455566666655 3344443 578888888888887777788888888888888888887777778888888888888
Q ss_pred cCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcc
Q 037111 476 ANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSI 555 (964)
Q Consensus 476 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 555 (964)
+|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 88888777788888888999999999988777777888899999999999998766667888999999999999999888
Q ss_pred cccccccccceEEEecCCcccccCCC
Q 037111 556 PTNFENMHGLLSIDISYNELDGPIPS 581 (964)
Q Consensus 556 ~~~~~~l~~L~~l~ls~N~l~~~~~~ 581 (964)
+..|..+++|+.|++++|+++|....
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~c~~~~ 197 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFDCSRCE 197 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBCTTSTT
T ss_pred HHHHhCCCCCCEEEeeCCceeCCccc
Confidence 88888999999999999999887544
No 343
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.8e-25 Score=252.65 Aligned_cols=244 Identities=20% Similarity=0.274 Sum_probs=134.4
Q ss_pred CCCccccCCCCcCeeecccCCccCcCC----cccCCCCcccEEEcccccc---CCcccc-c-------CCCCCCCEEEcC
Q 037111 99 NIPSPIGNLTKLKFLNLSSNHFSGKIP----SEIGLLTNLEVLHMFVNHL---NGSIPE-I-------GHLSSLKNLALD 163 (964)
Q Consensus 99 ~~p~~~~~l~~L~~L~Ls~n~l~~~~p----~~~~~l~~L~~L~l~~n~l---~~~~~~-~-------~~l~~L~~L~L~ 163 (964)
.++..+..+++|++|+|++|.+++..+ ..+..+++|++|+|++|.+ ++.+|. + ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 466777778888888888888775533 3355666667776666433 333331 2 344555555555
Q ss_pred CCCCCC----CCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCc---------cccc
Q 037111 164 GNHLDG----PIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYL---------RKLT 230 (964)
Q Consensus 164 ~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l---------~~L~ 230 (964)
+|.+++ .+|..+..+++|++|+|++|.+++..+..+. ..+..+ ++|+
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~--------------------~~l~~l~~~~~~~~~~~L~ 162 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIA--------------------RALQELAVNKKAKNAPPLR 162 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHH--------------------HHHHHHHHHHHHHTCCCCC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHH--------------------HHHHHHhhhhhcccCCCCc
Confidence 555544 2344444445555555555544322222111 111122 6677
Q ss_pred eeeccccccC-CCCh---hhhhcccccceeeccccccc--c---ccCCcccCccccceeeccccccc----ccCCccccc
Q 037111 231 KLELSNNQLS-GSIP---QEIGNLKLLTDLSLSQNQLR--G---TVPSSLSNLSSLEILHLYDNQLS----GHIPQEIGN 297 (964)
Q Consensus 231 ~L~L~~N~l~-~~~p---~~~~~l~~L~~L~L~~N~l~--~---~~p~~l~~l~~L~~L~L~~N~l~----~~~~~~~~~ 297 (964)
+|+|++|+++ +.+| ..+..+++|++|+|++|+++ | ..|..+..+++|++|+|++|.++ +.+|..+..
T Consensus 163 ~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~ 242 (386)
T 2ca6_A 163 SIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS 242 (386)
T ss_dssp EEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG
T ss_pred EEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHcc
Confidence 7777777765 3333 35556677777777777776 2 33445666777777777777775 455666677
Q ss_pred CccccEEEeeCccCccc----CCccccc--CCcceEEEeecccccc----cccccc-cCCCcCCeeecCCCccccc
Q 037111 298 FMNLNSLSVGGNQFTGF----LPQNICQ--SGSLQYFSVHDNYFIG----SLPKTL-RNCTSLERVRLEKNQLIGN 362 (964)
Q Consensus 298 l~~L~~L~l~~N~l~~~----~p~~~~~--~~~L~~L~l~~n~l~~----~~p~~l-~~l~~L~~L~L~~N~l~~~ 362 (964)
+++|+.|+|++|++++. ++..+.. +++|++|++++|.+.+ .+|..+ .++++|+.|++++|++++.
T Consensus 243 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 243 WPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp CTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred CCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 77777777777776654 2222211 4444455555444444 234433 3345555555555555443
No 344
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=5.4e-23 Score=215.61 Aligned_cols=198 Identities=18% Similarity=0.142 Sum_probs=89.1
Q ss_pred CCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCC-CCCCCCccccCCCCcchhhccc-ccccCCccccccCccccceee
Q 037111 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNS-LPGSIPSSIGNLSNLVYLFLKK-NHLRGPIPSSFGYLRKLTKLE 233 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~ 233 (964)
+|++|+|++|++++..+..|+++++|++|++++|+ +++..+..|.++++|++|+|++ |++++..+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 45555555555554444445555555555555554 4433333444555555555554 455444444444444444444
Q ss_pred ccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccc-cccccCCcccccCcccc-EEEeeCccC
Q 037111 234 LSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDN-QLSGHIPQEIGNFMNLN-SLSVGGNQF 311 (964)
Q Consensus 234 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~-~L~l~~N~l 311 (964)
+++|++++ +|. +..+++|+ .|++|++++| ++++..+..|..+++|+ .|++++|++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~---------------------~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTD---------------------IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCC---------------------SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCC
T ss_pred CCCCCCcc-ccc-cccccccc---------------------cccEEECCCCcchhhcCcccccchhcceeEEEcCCCCC
Confidence 44444443 232 33444443 0004444444 44433333444444444 444444444
Q ss_pred cccCCcccccCCcceEEEeeccc-ccccccccccCC-CcCCeeecCCCccccccCcccCCCCCCcEEEccC
Q 037111 312 TGFLPQNICQSGSLQYFSVHDNY-FIGSLPKTLRNC-TSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSY 380 (964)
Q Consensus 312 ~~~~p~~~~~~~~L~~L~l~~n~-l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 380 (964)
+...+..+.. .+|+.|++++|. +.+..+..|.++ ++|+.|++++|++++++.. .+++|+.|++++
T Consensus 169 ~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~ 235 (239)
T 2xwt_C 169 TSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARN 235 (239)
T ss_dssp CEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTT
T ss_pred cccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccC
Confidence 4222222222 334444444442 333334444555 5555555555555544332 334445555444
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1e-22 Score=221.84 Aligned_cols=199 Identities=26% Similarity=0.371 Sum_probs=174.9
Q ss_pred ccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCC
Q 037111 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLK 158 (964)
Q Consensus 79 ~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~ 158 (964)
+...+++|++|++++|.++. +| .+..+++|++|+|++|.+++ +|. ++.+++|++|+|++|.+++. +.+..+++|+
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~ 110 (308)
T 1h6u_A 36 TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKNV-SAIAGLQSIK 110 (308)
T ss_dssp CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSCC-GGGTTCTTCC
T ss_pred cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCCc-hhhcCCCCCC
Confidence 34568899999999999985 55 68999999999999999995 444 99999999999999999875 5799999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccc
Q 037111 159 NLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ 238 (964)
Q Consensus 159 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 238 (964)
+|+|++|++++. | .++.+++|++|++++|++++..+ ++.+++|++|+|++|++++..+ +..+++|++|++++|+
T Consensus 111 ~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCc
Confidence 999999999964 4 39999999999999999996543 8999999999999999997544 8999999999999999
Q ss_pred cCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCc
Q 037111 239 LSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQ 293 (964)
Q Consensus 239 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 293 (964)
+++..+ +..+++|++|+|++|++++.. .+..+++|+.|++++|++++ .|.
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~-~~~ 234 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN-QPV 234 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC-CCE
T ss_pred cCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec-CCe
Confidence 996544 899999999999999999654 38999999999999999984 443
No 346
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=1.3e-24 Score=240.79 Aligned_cols=221 Identities=18% Similarity=0.196 Sum_probs=138.2
Q ss_pred cCeeecccCCccCcCCcccCCC--CcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCC-CCCCCCCCCCCcEEEE
Q 037111 110 LKFLNLSSNHFSGKIPSEIGLL--TNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGP-IPVSIGNLSSLVGLYL 186 (964)
Q Consensus 110 L~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L 186 (964)
++.|++++|.+. |..+..+ ++++.|++++|.+++.++.+..+++|++|+|++|.+++. +|..+..+++|++|+|
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L 125 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSL 125 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEEC
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeC
Confidence 555666655554 3334444 555666666666655555555566666666666666544 5555666666666666
Q ss_pred ecCCCCCCCCccccCCCCcchhhcccc-cccCC-ccccccCccccceeecccc-ccCCC-Chhhhhccc-ccceeecccc
Q 037111 187 YNNSLPGSIPSSIGNLSNLVYLFLKKN-HLRGP-IPSSFGYLRKLTKLELSNN-QLSGS-IPQEIGNLK-LLTDLSLSQN 261 (964)
Q Consensus 187 ~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~-~L~~L~L~~N 261 (964)
++|.+++..|..++.+++|++|+|++| .+++. ++..+..+++|++|++++| .+++. ++..+..++ +|++|+|++|
T Consensus 126 ~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 126 EGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp TTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred cCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 666666555666666666777777766 55542 4555677777888888888 77643 466677777 8888888887
Q ss_pred --ccc-cccCCcccCccccceeeccccc-ccccCCcccccCccccEEEeeCcc-CcccCCcccccCCcceEEEeecc
Q 037111 262 --QLR-GTVPSSLSNLSSLEILHLYDNQ-LSGHIPQEIGNFMNLNSLSVGGNQ-FTGFLPQNICQSGSLQYFSVHDN 333 (964)
Q Consensus 262 --~l~-~~~p~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~~~~L~~L~l~~n 333 (964)
.++ +.+|..+..+++|++|++++|. +++..+..+..+++|+.|++++|. ++......+..+++|+.|++++|
T Consensus 206 ~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 206 RKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp GGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred cccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 344 3455566677777777777777 665666677777777777777774 22221123444445555555544
No 347
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.6e-24 Score=244.86 Aligned_cols=241 Identities=20% Similarity=0.276 Sum_probs=176.0
Q ss_pred cccccCCCcCCeeecCCCccccccC----cccCCCCCCcEEEccCCee---ccccCcc-------ccCCCccceEeeccc
Q 037111 340 PKTLRNCTSLERVRLEKNQLIGNIS----DDFGIYPNLKLFDLSYNKF---YGELSSN-------WWNCPQLGILKIAGN 405 (964)
Q Consensus 340 p~~l~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~i---~~~~~~~-------~~~~~~L~~L~L~~n 405 (964)
+..+..+++|+.|+|++|.++...+ ..+..+++|+.|+|++|.+ .+..+.. +..+++|++|+|++|
T Consensus 25 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n 104 (386)
T 2ca6_A 25 FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN 104 (386)
T ss_dssp SHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred HHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCC
Confidence 3444455555555555555554322 2244556666666665432 2222222 256677777777777
Q ss_pred ccCC----CCCCCCcccccCcEEeccCCcccccCCccccc----c---------CCcceeeccccccc-CCCc---hhhh
Q 037111 406 NITG----GIPPEIGNATQLHELDFSSNHLVGKVPLELAN----L---------TSLNDLILNGNQLS-GGIP---PELG 464 (964)
Q Consensus 406 ~i~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~----l---------~~L~~L~L~~N~l~-~~~~---~~~~ 464 (964)
.++. .++..+..+++|++|+|++|.+++..+..+.. + ++|++|+|++|.++ ..++ ..+.
T Consensus 105 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~ 184 (386)
T 2ca6_A 105 AFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQ 184 (386)
T ss_dssp CCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHH
Confidence 7765 24556777888999999999887544444433 3 89999999999997 3444 4677
Q ss_pred ccCCCCceecccCcccc-----ccCCCcccccccceecCCccccC----ccchhhhhccccCCeecccCccccCC----C
Q 037111 465 LLTDLGYLDLSANRFSK-----SIPGNMGYLLKLHYLNMSSNEFS----QEIPIQLGKLVQLSELDLSHNLLRGE----I 531 (964)
Q Consensus 465 ~l~~L~~L~Ls~N~l~~-----~~~~~~~~l~~L~~L~Ls~N~l~----~~~~~~~~~l~~L~~L~Ls~N~l~~~----~ 531 (964)
.+++|++|+|++|+++. ..+..+..+++|++|+|++|.|+ ..+|..+..+++|+.|+|++|+|++. +
T Consensus 185 ~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l 264 (386)
T 2ca6_A 185 SHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAV 264 (386)
T ss_dssp HCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHH
T ss_pred hCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHH
Confidence 88999999999999973 35557889999999999999996 56788899999999999999999865 4
Q ss_pred Chhcc--cccccceeeccCCcCCC----cccccc-cccccceEEEecCCcccccCC
Q 037111 532 PPEIC--NLESLEKLNLSHNNLSG----SIPTNF-ENMHGLLSIDISYNELDGPIP 580 (964)
Q Consensus 532 ~~~~~--~l~~L~~L~Ls~N~l~~----~~~~~~-~~l~~L~~l~ls~N~l~~~~~ 580 (964)
+..+. .+++|+.|+|++|+|++ .+|..+ .++++|+.|++++|++++..+
T Consensus 265 ~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 265 VDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 56663 38999999999999997 477777 678999999999999987654
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=2.3e-22 Score=223.62 Aligned_cols=242 Identities=20% Similarity=0.175 Sum_probs=170.1
Q ss_pred ceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCc-
Q 037111 48 CTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPS- 126 (964)
Q Consensus 48 C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~- 126 (964)
|.|..|.|+.. + +..+|-+.++++++|+|++|+|+...+.+|.++++|++|+|++|.+.+.+|.
T Consensus 9 C~~~~v~C~~~-----------~----Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 9 CSNRVFLCQES-----------K----VTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp EETTEEEEEST-----------T----CCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT
T ss_pred eeCCEEEecCC-----------C----CCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh
Confidence 77888888632 2 2345656678899999999999865556789999999999999998776665
Q ss_pred ccCCCCcccE-EEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEec-CCCCCCCCccccCCC
Q 037111 127 EIGLLTNLEV-LHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYN-NSLPGSIPSSIGNLS 203 (964)
Q Consensus 127 ~~~~l~~L~~-L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~ 203 (964)
.|.++++|++ +.++.|+++...|. +..+++|++|++++|++++..+..+....++..|++.+ |++....+..|..+.
T Consensus 74 ~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~ 153 (350)
T 4ay9_X 74 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS 153 (350)
T ss_dssp SBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB
T ss_pred HhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc
Confidence 5778888765 56667888877665 78888888888888888877666777777788888865 566655455666654
Q ss_pred -CcchhhcccccccCCccccccCccccceeeccc-cccCCCChhhhhcccccceeeccccccccccCCcccCccccceee
Q 037111 204 -NLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSN-NQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILH 281 (964)
Q Consensus 204 -~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 281 (964)
.+++|+|++|+|+.+.+..| ...+|++|++++ |.++...+..|..+++|++|+|++|+|+...+..+.++++|+.++
T Consensus 154 ~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~ 232 (350)
T 4ay9_X 154 FESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARS 232 (350)
T ss_dssp SSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTT
T ss_pred hhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhcc
Confidence 57788888888885444444 456788888864 666644445678888888888888888744444455554444444
Q ss_pred cccccccccCCcccccCccccEEEeeCc
Q 037111 282 LYDNQLSGHIPQEIGNFMNLNSLSVGGN 309 (964)
Q Consensus 282 L~~N~l~~~~~~~~~~l~~L~~L~l~~N 309 (964)
+ +.++ .+| .+..+++|+.++++++
T Consensus 233 ~--~~l~-~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 233 T--YNLK-KLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp C--TTCC-CCC-CTTTCCSCCEEECSCH
T ss_pred C--CCcC-cCC-CchhCcChhhCcCCCC
Confidence 3 2233 445 3566677777776654
No 349
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=8.7e-23 Score=238.38 Aligned_cols=205 Identities=23% Similarity=0.319 Sum_probs=105.5
Q ss_pred eeece-EeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcc
Q 037111 49 TWSGI-SCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSE 127 (964)
Q Consensus 49 ~w~gv-~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 127 (964)
.|.|+ .|.. ++++.++|+++.+++ + |...+++|++|+|++|+|+ .+| ..+++|++|+|++|.|++ +|.
T Consensus 49 ~~~~l~~C~~-~~L~~L~Ls~n~L~~-l---p~~l~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~- 117 (571)
T 3cvr_A 49 AVSLLKECLI-NQFSELQLNRLNLSS-L---PDNLPPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE- 117 (571)
T ss_dssp HHHHHHHHHH-TTCSEEECCSSCCSC-C---CSCCCTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-
T ss_pred hhhhcccccc-CCccEEEeCCCCCCc-c---CHhHcCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-
Confidence 69999 7753 456666666666554 2 2223455666666666665 344 335556666666666654 444
Q ss_pred cCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcch
Q 037111 128 IGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVY 207 (964)
Q Consensus 128 ~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 207 (964)
++. +|++|+|++|++++. |. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|++
T Consensus 118 l~~--~L~~L~Ls~N~l~~l-p~--~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~ 184 (571)
T 3cvr_A 118 LPA--SLKHLDVDNNQLTML-PE--LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEA 184 (571)
T ss_dssp CCT--TCCEEECCSSCCSCC-CC--CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCE
T ss_pred hhc--CCCEEECCCCcCCCC-CC--cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCE
Confidence 433 555555555555552 22 34555555555555553 333 34455555555555553 333 33 44444
Q ss_pred hhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccc
Q 037111 208 LFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQL 287 (964)
Q Consensus 208 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 287 (964)
|+|++|+|+ .+|. |.. +| +.....|+.|+|++|+|+ .+|..+..+++|+.|+|++|++
T Consensus 185 L~Ls~N~L~-~lp~-~~~--~L-----------------~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l 242 (571)
T 3cvr_A 185 LDVSTNLLE-SLPA-VPV--RN-----------------HHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPL 242 (571)
T ss_dssp EECCSSCCS-SCCC-CC---------------------------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSC
T ss_pred EECcCCCCC-chhh-HHH--hh-----------------hcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcC
Confidence 444444444 2222 221 22 000011266666666666 4555555566666666666666
Q ss_pred cccCCcccccCc
Q 037111 288 SGHIPQEIGNFM 299 (964)
Q Consensus 288 ~~~~~~~~~~l~ 299 (964)
++.+|..+..+.
T Consensus 243 ~~~~p~~l~~l~ 254 (571)
T 3cvr_A 243 SSRIRESLSQQT 254 (571)
T ss_dssp CHHHHHHHHHHH
T ss_pred CCcCHHHHHHhh
Confidence 666666555543
No 350
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=1.8e-21 Score=216.41 Aligned_cols=241 Identities=19% Similarity=0.111 Sum_probs=173.7
Q ss_pred EEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc--cCCCCCCCE-EEcCC
Q 037111 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE--IGHLSSLKN-LALDG 164 (964)
Q Consensus 88 ~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~--~~~l~~L~~-L~L~~ 164 (964)
.++-++++++ .+|..+ .+++++|+|++|+|+...+..|+++++|++|+|++|++.+.+|. |..+++|++ +.+++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4567788888 678766 46899999999999844445789999999999999998776663 778888765 66777
Q ss_pred CCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhccc-ccccCCccccccCcc-ccceeeccccccCCC
Q 037111 165 NHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKK-NHLRGPIPSSFGYLR-KLTKLELSNNQLSGS 242 (964)
Q Consensus 165 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~ 242 (964)
|++++..|..|.++++|++|++++|++++..+..+....++..|++.+ |+++.+.+..|..+. .++.|+|++|+|+.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~- 168 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE- 168 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-
Confidence 899877788889999999999999999876666677777788888865 577766666777664 68888888888884
Q ss_pred Chhhhhcccccceeeccc-cccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCccccc
Q 037111 243 IPQEIGNLKLLTDLSLSQ-NQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQ 321 (964)
Q Consensus 243 ~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 321 (964)
+|.......+|+.|++++ |.++...++.|..+++|++|+|++|+|+...+..+ .+|+.|.+.++.--..+| .+..
T Consensus 169 i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~~lP-~l~~ 244 (350)
T 4ay9_X 169 IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLKKLP-TLEK 244 (350)
T ss_dssp ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCCCCC-CTTT
T ss_pred CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcCcCC-Cchh
Confidence 444444556788888874 66664444567888888888888888885444344 445555544433222334 2555
Q ss_pred CCcceEEEeeccccc
Q 037111 322 SGSLQYFSVHDNYFI 336 (964)
Q Consensus 322 ~~~L~~L~l~~n~l~ 336 (964)
+++|+.+++.++.-.
T Consensus 245 l~~L~~l~l~~~~~c 259 (350)
T 4ay9_X 245 LVALMEASLTYPSHC 259 (350)
T ss_dssp CCSCCEEECSCHHHH
T ss_pred CcChhhCcCCCCccc
Confidence 666666666655433
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=5.6e-21 Score=195.56 Aligned_cols=180 Identities=23% Similarity=0.219 Sum_probs=130.4
Q ss_pred eEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCC
Q 037111 87 SYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGN 165 (964)
Q Consensus 87 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n 165 (964)
+.++.+++.++ .+|..+ .++|++|+|++|++++..+..++.+++|++|++++|++++.++. +..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 35677777776 456544 45888888888888866666677888888888888888876665 577788888888888
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChh
Q 037111 166 HLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQ 245 (964)
Q Consensus 166 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 245 (964)
++++..+..++++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|++++|.+.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~--- 163 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT--- 163 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC---
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC---
Confidence 88766666677788888888888888766666677777777777777777766666677777777777777766543
Q ss_pred hhhcccccceeeccccccccccCCcccCccc
Q 037111 246 EIGNLKLLTDLSLSQNQLRGTVPSSLSNLSS 276 (964)
Q Consensus 246 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 276 (964)
+++|++|+++.|+++|.+|..++.++.
T Consensus 164 ----~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 164 ----CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----CCCHHHHHHHHHhCCceeeccCccccC
Confidence 345677777777777777766665543
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=2.1e-21 Score=226.73 Aligned_cols=188 Identities=25% Similarity=0.370 Sum_probs=121.6
Q ss_pred CcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEec
Q 037111 109 KLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYN 188 (964)
Q Consensus 109 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 188 (964)
+|+.|+|++|+|++ +|..+. ++|++|+|++|+++. +| +.+++|++|+|++|+|++ +|. +++ +|++|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~-ip--~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALIS-LP--ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSC-CC--CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcc-cc--cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCC
Confidence 44455555554443 444332 445555555555542 22 334556666666666654 444 443 666666666
Q ss_pred CCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccC
Q 037111 189 NSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVP 268 (964)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 268 (964)
|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 66664 444 45666666666666665 333 45677777777777775 454 44 77888888888887 566
Q ss_pred CcccCcccc-------ceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCC
Q 037111 269 SSLSNLSSL-------EILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSG 323 (964)
Q Consensus 269 ~~l~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 323 (964)
. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++..|..+..+.
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp C-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred h-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 5 543 66 99999999999 6888888899999999999999999988887654
No 353
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=8.9e-22 Score=210.76 Aligned_cols=148 Identities=17% Similarity=0.109 Sum_probs=118.1
Q ss_pred hhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCch----------------hhHHHHHHHHHHHhCCCCCceee
Q 037111 688 INNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGET----------------THQKEFLSEIKALTGVRHRNIVK 751 (964)
Q Consensus 688 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~~E~~~l~~l~h~niv~ 751 (964)
...|+..+.||+|+||.||+|...+|+.||||+++...... .....+.+|+.++++++ | ++
T Consensus 89 ~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~ 165 (282)
T 1zar_A 89 GKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LA 165 (282)
T ss_dssp TSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SS
T ss_pred CeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CC
Confidence 34566779999999999999988779999999986322110 13467899999999998 4 66
Q ss_pred EEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCce
Q 037111 752 FYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEA 831 (964)
Q Consensus 752 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~ 831 (964)
+.+++.. +..++||||++||+|.+ +.. .....++.|++.|++|||++ +|+||||||+||+++ ++.+
T Consensus 166 v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~v 231 (282)
T 1zar_A 166 VPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGI 231 (282)
T ss_dssp SCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEE
T ss_pred cCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcE
Confidence 6665543 56699999999999998 521 12447999999999999999 999999999999999 9999
Q ss_pred EEeccCcccccCCCCCCccccccccccccccccc
Q 037111 832 HVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAY 865 (964)
Q Consensus 832 kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~ 865 (964)
||+|||+|+. +..++|||++.
T Consensus 232 kl~DFG~a~~-------------~~~~~a~e~l~ 252 (282)
T 1zar_A 232 WIIDFPQSVE-------------VGEEGWREILE 252 (282)
T ss_dssp EECCCTTCEE-------------TTSTTHHHHHH
T ss_pred EEEECCCCeE-------------CCCCCHHHHHH
Confidence 9999999863 23467888764
No 354
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=5.8e-22 Score=240.44 Aligned_cols=216 Identities=21% Similarity=0.196 Sum_probs=86.4
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEec
Q 037111 12 AARGLLKWKATLQNHNNSLLPSWTLDPVNATNITTPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDL 91 (964)
Q Consensus 12 ~~~all~~k~~~~~~~~~~l~sW~~~~~~~~~~~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l 91 (964)
+++||+++..+.....+..-.+|... .+..+.|.+++++. ++++.++|.++++... + ...++.++|
T Consensus 133 ~~~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~----~---~~~l~~l~L 198 (727)
T 4b8c_D 133 TKQALMEMADTLTDSKTAKKQQPTGD------STPSGTATNSAVST-PLTPKIELFANGKDEA----N---QALLQHKKL 198 (727)
T ss_dssp CCHHHHHHHHHHHHHHTTC-------------------------------------------------------------
T ss_pred chhhhhhhhhhcccccCcccCCCcCC------CCccccCCCceecC-CccceEEeeCCCCCcc----h---hhHhhcCcc
Confidence 56899999998866555555667532 24567899999975 6788899887776542 1 123455666
Q ss_pred cCCcccc---------CCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEc
Q 037111 92 NENQLYG---------NIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLAL 162 (964)
Q Consensus 92 ~~n~l~~---------~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L 162 (964)
+.|.|.+ ..|+.+..++.|+.|+|++|.+. .+|..+..+++|++|+|++|.++..++.++.|++|++|+|
T Consensus 199 s~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L 277 (727)
T 4b8c_D 199 SQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDL 277 (727)
T ss_dssp -----------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEEC
T ss_pred CcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeC
Confidence 6665543 23455555666666666666655 4555555555555555555555533333555555555555
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCcc-ccceeeccccccCC
Q 037111 163 DGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLR-KLTKLELSNNQLSG 241 (964)
Q Consensus 163 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~ 241 (964)
++|.|+ .+|..|++|++|++|+|++|.|+ .+|..|++|++|++|+|++|.|++.+|..+..+. .+..|+|++|.+++
T Consensus 278 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~ 355 (727)
T 4b8c_D 278 SHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEI 355 (727)
T ss_dssp TTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred cCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccC
Confidence 555555 44555555555555555555554 4455555555555555555555555554444332 11234455555554
Q ss_pred CCh
Q 037111 242 SIP 244 (964)
Q Consensus 242 ~~p 244 (964)
.+|
T Consensus 356 ~~p 358 (727)
T 4b8c_D 356 PLP 358 (727)
T ss_dssp CCC
T ss_pred cCc
Confidence 444
No 355
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=6.3e-21 Score=225.38 Aligned_cols=195 Identities=24% Similarity=0.383 Sum_probs=144.1
Q ss_pred cCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEE
Q 037111 82 LFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLA 161 (964)
Q Consensus 82 ~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~ 161 (964)
.+..+..+.++.+.+.+.++ +..|++|+.|+|++|.++ .+| .++.+++|++|+|++|.+++.++ +..+++|+.|+
T Consensus 19 ~l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~ 93 (605)
T 1m9s_A 19 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEE
T ss_pred HHHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh-hccCCCCCEEE
Confidence 34556667777777775433 567888888888888887 344 57788888888888888887666 77888888888
Q ss_pred cCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCC
Q 037111 162 LDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSG 241 (964)
Q Consensus 162 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 241 (964)
|++|.+++ +| .++.+++|++|+|++|++++. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|+|++
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 88888875 33 677888888888888888753 4577777888888888887765 567777788888888888776
Q ss_pred CChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccC
Q 037111 242 SIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHI 291 (964)
Q Consensus 242 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 291 (964)
..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++.+..
T Consensus 168 ~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 168 IVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCC
T ss_pred chh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCc
Confidence 555 77777788888888877743 34777777777777777777543
No 356
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=4.6e-21 Score=206.87 Aligned_cols=191 Identities=25% Similarity=0.402 Sum_probs=113.3
Q ss_pred CcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEc
Q 037111 83 FSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLAL 162 (964)
Q Consensus 83 ~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L 162 (964)
+..+..+.+..+.+++.. .+..+++|++|++++|.++. +| .++.+++|++|++++|++++..+ +..+++|++|+|
T Consensus 23 l~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l 97 (291)
T 1h6t_A 23 FAETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFL 97 (291)
T ss_dssp HHHHHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEEC
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEEC
Confidence 344455556666665432 24566777777777777763 33 36666666777776666666555 666666666666
Q ss_pred CCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCC
Q 037111 163 DGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGS 242 (964)
Q Consensus 163 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 242 (964)
++|.+++ +| .++.+++|++|+|++|++++. ..+..+++|++|++++|++++. ..+..+++|++|+|++|++++.
T Consensus 98 ~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~ 171 (291)
T 1h6t_A 98 DENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI 171 (291)
T ss_dssp CSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred CCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccc
Confidence 6666664 22 366666666666666666642 3455666666666666666643 3455566666666666666544
Q ss_pred ChhhhhcccccceeeccccccccccCCcccCccccceeeccccccc
Q 037111 243 IPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288 (964)
Q Consensus 243 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 288 (964)
.| +..+++|++|+|++|++++ ++ .+..+++|+.|++++|+++
T Consensus 172 ~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 172 VP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp GG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEE
T ss_pred hh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCccc
Confidence 33 5556666666666666653 22 2555555666666665555
No 357
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=1.4e-20 Score=194.13 Aligned_cols=156 Identities=20% Similarity=0.237 Sum_probs=133.6
Q ss_pred cEEeccCCcccccCCccccccCCcceeecccccccCCCc-hhhhccCCCCceecccCccccccCCCcccccccceecCCc
Q 037111 422 HELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIP-PELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSS 500 (964)
Q Consensus 422 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 500 (964)
+.+++++|.++ .+|..+. ..+++|+|++|.|++..+ ..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 47778888776 4555543 346788888888886644 4578888899999999999888888899999999999999
Q ss_pred cccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCC
Q 037111 501 NEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIP 580 (964)
Q Consensus 501 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 580 (964)
|+|++..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|++++|+|+|..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99998888889999999999999999998888999999999999999999998889999999999999999999998765
No 358
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=8e-20 Score=189.69 Aligned_cols=159 Identities=26% Similarity=0.326 Sum_probs=94.0
Q ss_pred CCCceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcC
Q 037111 45 TTPCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKI 124 (964)
Q Consensus 45 ~~~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 124 (964)
++.|.|.+|.|+..+ +..+|.+..++|++|+|++|++++..|..|..+++|++|+|++|+|++..
T Consensus 16 ~~~Cs~~~v~c~~~~---------------l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~ 80 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKR---------------HASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALP 80 (229)
T ss_dssp TCEEETTEEECTTSC---------------CSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCEEeCCEeEccCCC---------------cCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcC
Confidence 567999999997421 23445555577777777777777776777777777777777777776443
Q ss_pred CcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCC
Q 037111 125 PSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSN 204 (964)
Q Consensus 125 p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 204 (964)
+..|..+++|++|+|++|++++.++ ..|..+++|++|+|++|+|+ .+|..+..+++
T Consensus 81 ~~~~~~l~~L~~L~Ls~N~l~~l~~-----------------------~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~ 136 (229)
T 3e6j_A 81 VGVFDSLTQLTVLDLGTNQLTVLPS-----------------------AVFDRLVHLKELFMCCNKLT-ELPRGIERLTH 136 (229)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCT-----------------------TTTTTCTTCCEEECCSSCCC-SCCTTGGGCTT
T ss_pred hhhcccCCCcCEEECCCCcCCccCh-----------------------hHhCcchhhCeEeccCCccc-ccCcccccCCC
Confidence 3445555555555555555554444 33444444444444444444 34444445555
Q ss_pred cchhhcccccccCCccccccCccccceeeccccccCCC
Q 037111 205 LVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGS 242 (964)
Q Consensus 205 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 242 (964)
|++|+|++|+|++..+..|..+++|+.|+|++|.+...
T Consensus 137 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 137 LTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 55555555555544444455555555556665555543
No 359
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=2.4e-20 Score=192.28 Aligned_cols=155 Identities=20% Similarity=0.244 Sum_probs=117.7
Q ss_pred cEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCcc
Q 037111 422 HELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSN 501 (964)
Q Consensus 422 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 501 (964)
+.++++++.++ .+|..+. ++|+.|+|++|.|++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45666666665 3454443 56777777777777666667777777777777777777777777777888888888888
Q ss_pred ccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccC
Q 037111 502 EFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPI 579 (964)
Q Consensus 502 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~ 579 (964)
+|+...+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|+|.+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 887666666778888888888888888777778888888888888888888777777888888888888888887754
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=4.2e-20 Score=199.34 Aligned_cols=174 Identities=25% Similarity=0.327 Sum_probs=155.6
Q ss_pred ccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCC
Q 037111 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLK 158 (964)
Q Consensus 79 ~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~ 158 (964)
+...+++|+.|++++|.+++. | .+..+++|++|+|++|++++..| ++.+++|++|++++|.+++ ++.++.+++|+
T Consensus 41 ~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~ 115 (291)
T 1h6t_A 41 TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSSLKDLKKLK 115 (291)
T ss_dssp CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGGGTTCTTCC
T ss_pred chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-ChhhccCCCCC
Confidence 345688999999999999854 4 58999999999999999996544 9999999999999999987 55699999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccc
Q 037111 159 NLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ 238 (964)
Q Consensus 159 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 238 (964)
+|+|++|++++. +.++.+++|++|++++|++++. ..++.+++|++|+|++|++++..+ +..+++|++|+|++|.
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 999999999964 5789999999999999999965 679999999999999999998765 8999999999999999
Q ss_pred cCCCChhhhhcccccceeecccccccc
Q 037111 239 LSGSIPQEIGNLKLLTDLSLSQNQLRG 265 (964)
Q Consensus 239 l~~~~p~~~~~l~~L~~L~L~~N~l~~ 265 (964)
+++. + .+..+++|+.|++++|+++.
T Consensus 190 i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 190 ISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCCC-h-hhccCCCCCEEECcCCcccC
Confidence 9964 4 48999999999999999985
No 361
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=7e-20 Score=204.33 Aligned_cols=178 Identities=24% Similarity=0.219 Sum_probs=130.4
Q ss_pred eEeecccccCCCCCCCCcccccCcEEeccCCcccccCCcccc-ccCCcceeecccccccCCCchhhhccCCCCceecccC
Q 037111 399 ILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELA-NLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSAN 477 (964)
Q Consensus 399 ~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 477 (964)
.++++++.++. +|..+. +.++.|+|++|+|++..+..|. .+++|+.|+|++|+|++..+..|..+++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 45555555553 343332 3467788888888776676676 7788888888888888776777888888888888888
Q ss_pred ccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhc---ccccccceeeccCCcCCCc
Q 037111 478 RFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEI---CNLESLEKLNLSHNNLSGS 554 (964)
Q Consensus 478 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~Ls~N~l~~~ 554 (964)
+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 8877777778888888888888888887777788888888888888888875444444 5678888888888888876
Q ss_pred ccccccccccc--eEEEecCCcccccC
Q 037111 555 IPTNFENMHGL--LSIDISYNELDGPI 579 (964)
Q Consensus 555 ~~~~~~~l~~L--~~l~ls~N~l~~~~ 579 (964)
.+..|..++.+ +.|+|++|+|.+..
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred CHHHhhhccHhhcceEEecCCCccCCc
Confidence 66777777763 77888888887653
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.2e-19 Score=214.43 Aligned_cols=185 Identities=25% Similarity=0.325 Sum_probs=161.4
Q ss_pred ccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCC
Q 037111 79 PFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLK 158 (964)
Q Consensus 79 ~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~ 158 (964)
++..+++|+.|+|++|.+.. +| .|..|++|+.|+|++|.|++..| ++.+++|++|+|++|.+++ +|.+..+++|+
T Consensus 38 ~~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~ 112 (605)
T 1m9s_A 38 TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LSSLKDLKKLK 112 (605)
T ss_dssp CHHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CTTSTTCTTCC
T ss_pred chhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-ChhhccCCCCC
Confidence 45678899999999999985 44 69999999999999999996554 8999999999999999987 45799999999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccc
Q 037111 159 NLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ 238 (964)
Q Consensus 159 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 238 (964)
+|+|++|++++. +.+..+++|+.|+|++|++++. ..++.+++|+.|+|++|+|++..| +..+++|+.|+|++|+
T Consensus 113 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 113 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 999999999963 5689999999999999999965 679999999999999999998776 8999999999999999
Q ss_pred cCCCChhhhhcccccceeeccccccccccCCcccCccc
Q 037111 239 LSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSS 276 (964)
Q Consensus 239 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 276 (964)
|++. ..+..+++|+.|+|++|++.+.....+..+..
T Consensus 187 i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~ 222 (605)
T 1m9s_A 187 ISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLVV 222 (605)
T ss_dssp CCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSCEE
T ss_pred CCCC--hHHccCCCCCEEEccCCcCcCCcccccccEEe
Confidence 9964 46899999999999999998654433444333
No 363
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=2.6e-19 Score=184.53 Aligned_cols=155 Identities=23% Similarity=0.314 Sum_probs=105.3
Q ss_pred CceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCc
Q 037111 47 PCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPS 126 (964)
Q Consensus 47 ~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 126 (964)
.|.|..|.|.. +++ ..+|....++|+.|+|++|+|++..|..|..+++|++|+|++|.|++..|.
T Consensus 10 ~C~~~~v~c~~-----------~~l----~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~ 74 (220)
T 2v9t_B 10 TCSNNIVDCRG-----------KGL----TEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPD 74 (220)
T ss_dssp EEETTEEECTT-----------SCC----SSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTT
T ss_pred EECCCEEEcCC-----------CCc----CcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHH
Confidence 36777777753 222 234555557888888888888877667888888888888888888877777
Q ss_pred ccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCc
Q 037111 127 EIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNL 205 (964)
Q Consensus 127 ~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 205 (964)
.|..+++|++|+|++|.+++.++. +..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|
T Consensus 75 ~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 154 (220)
T 2v9t_B 75 AFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAI 154 (220)
T ss_dssp TTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred HhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCC
Confidence 777777777777777777765554 4666666666666666666666666666666666666666665544455555555
Q ss_pred chhhccccccc
Q 037111 206 VYLFLKKNHLR 216 (964)
Q Consensus 206 ~~L~L~~N~l~ 216 (964)
++|+|++|.+.
T Consensus 155 ~~L~L~~N~~~ 165 (220)
T 2v9t_B 155 QTMHLAQNPFI 165 (220)
T ss_dssp CEEECCSSCEE
T ss_pred CEEEeCCCCcC
Confidence 55555555544
No 364
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=3.1e-19 Score=185.24 Aligned_cols=157 Identities=25% Similarity=0.292 Sum_probs=127.1
Q ss_pred CcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCc
Q 037111 421 LHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSS 500 (964)
Q Consensus 421 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 500 (964)
.+.++.++++++ .+|..+. ++|++|+|++|.|++..|..|..+++|++|+|++|+|+...+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 456777777776 4555443 7788888888888877777788888888888888888766667778888888888888
Q ss_pred cccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCC
Q 037111 501 NEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIP 580 (964)
Q Consensus 501 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 580 (964)
|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|+++|..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 8888777777888888888888888888 678888888889999999998887777788888889999999998888765
Q ss_pred C
Q 037111 581 S 581 (964)
Q Consensus 581 ~ 581 (964)
.
T Consensus 177 ~ 177 (229)
T 3e6j_A 177 D 177 (229)
T ss_dssp G
T ss_pred h
Confidence 3
No 365
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=2.7e-19 Score=199.52 Aligned_cols=117 Identities=29% Similarity=0.257 Sum_probs=76.1
Q ss_pred CCccCcCcceeEEeccCCccccCCCcccc-CCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccc-cCCC
Q 037111 77 QFPFSLFSHLSYLDLNENQLYGNIPSPIG-NLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPE-IGHL 154 (964)
Q Consensus 77 ~~~~~~~~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~l 154 (964)
.+|....+.++.|+|++|+|++..+..+. ++++|++|+|++|+|++..|..|..+++|++|+|++|++++.++. +..+
T Consensus 32 ~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 111 (361)
T 2xot_A 32 NVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDL 111 (361)
T ss_dssp SCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred ccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCC
Confidence 34555566677778887777776666666 777777777777777765556666666666666666666655543 5556
Q ss_pred CCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCC
Q 037111 155 SSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPG 193 (964)
Q Consensus 155 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 193 (964)
++|++|+|++|++++..|..|.++++|++|+|++|+|++
T Consensus 112 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 150 (361)
T 2xot_A 112 QALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR 150 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS
T ss_pred cCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe
Confidence 666666666666665555556666666666666666553
No 366
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=2.7e-19 Score=184.33 Aligned_cols=150 Identities=23% Similarity=0.256 Sum_probs=77.5
Q ss_pred EEeccCCccccCCCccccCCCCcCeeecccCCccCcCCc-ccCCCCcccEEEccccccCCccc-ccCCCCCCCEEEcCCC
Q 037111 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPS-EIGLLTNLEVLHMFVNHLNGSIP-EIGHLSSLKNLALDGN 165 (964)
Q Consensus 88 ~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~L~~n 165 (964)
.+++++|.++. +|..+. ..+++|+|++|+|++..|. .|+.+++|++|+|++|++++..+ .+..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 67777777763 565543 3456777777777654332 34555555555555555554444 2445555555555555
Q ss_pred CCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccC
Q 037111 166 HLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240 (964)
Q Consensus 166 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 240 (964)
++++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 555444444445555555555555554444444444444444444444444444444444444444444444444
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=8.2e-20 Score=193.79 Aligned_cols=171 Identities=22% Similarity=0.337 Sum_probs=106.0
Q ss_pred cCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCE
Q 037111 80 FSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKN 159 (964)
Q Consensus 80 ~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~ 159 (964)
...+.+++.+++++|.+++. + .+..+++|++|++++|+++ .+| .++.+++|++|+|++|++++..+ ++.+++|++
T Consensus 15 d~~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~ 89 (263)
T 1xeu_A 15 DPGLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEE 89 (263)
T ss_dssp SHHHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCE
T ss_pred CHHHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCE
Confidence 33456677777777777743 3 5677777788888777777 455 56677777777777777776655 666777777
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeecccccc
Q 037111 160 LALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQL 239 (964)
Q Consensus 160 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 239 (964)
|+|++|++++ +|... . ++|++|+|++|++++. +.++++++|++|+|++|++++. + .+..+++|++|+|++|++
T Consensus 90 L~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 90 LSVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEI 162 (263)
T ss_dssp EECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCC
T ss_pred EECCCCccCC-cCccc-c-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcC
Confidence 7777777764 33222 2 6666666666666642 2455666666666666666543 2 455555555555555555
Q ss_pred CCCChhhhhcccccceeeccccccc
Q 037111 240 SGSIPQEIGNLKLLTDLSLSQNQLR 264 (964)
Q Consensus 240 ~~~~p~~~~~l~~L~~L~L~~N~l~ 264 (964)
++. ..+..+++|+.|++++|+++
T Consensus 163 ~~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 163 TNT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp CBC--TTSTTCCCCCEEEEEEEEEE
T ss_pred cch--HHhccCCCCCEEeCCCCccc
Confidence 543 34555555555555555555
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=5.1e-21 Score=224.87 Aligned_cols=179 Identities=20% Similarity=0.185 Sum_probs=111.1
Q ss_pred CcCcceeEEeccCCccccCCCccccCCCCcCeeecccCC-------------ccCcCCcccCCCCcccEEE-ccccccCC
Q 037111 81 SLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNH-------------FSGKIPSEIGLLTNLEVLH-MFVNHLNG 146 (964)
Q Consensus 81 ~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~-------------l~~~~p~~~~~l~~L~~L~-l~~n~l~~ 146 (964)
...++|+.|+|++|.++ .+|+.|++|++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+..
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 45678889999999997 689999999999999987775 5677788888888888888 66664431
Q ss_pred ccc------ccCC--CCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCC
Q 037111 147 SIP------EIGH--LSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGP 218 (964)
Q Consensus 147 ~~~------~~~~--l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 218 (964)
... .+.. ...|+.|+|++|+|++ +|. ++++++|++|+|++|+|+ .+|..++++++|++|+|++|+|++
T Consensus 425 L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~- 500 (567)
T 1dce_A 425 LRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN- 500 (567)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-
T ss_pred hhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-
Confidence 110 0000 1235556666666654 343 555556666666666555 455555555555555555555554
Q ss_pred ccccccCccccceeeccccccCCCC-hhhhhcccccceeecccccccc
Q 037111 219 IPSSFGYLRKLTKLELSNNQLSGSI-PQEIGNLKLLTDLSLSQNQLRG 265 (964)
Q Consensus 219 ~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~ 265 (964)
+| .|+.+++|++|+|++|+|++.. |..++.+++|+.|+|++|++++
T Consensus 501 lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~ 547 (567)
T 1dce_A 501 VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547 (567)
T ss_dssp CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCC
Confidence 33 4555555555555555555444 5555555555555555555553
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=1.7e-19 Score=191.42 Aligned_cols=177 Identities=24% Similarity=0.335 Sum_probs=141.8
Q ss_pred cCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCC
Q 037111 98 GNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGN 177 (964)
Q Consensus 98 ~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 177 (964)
...|+. .+.+++.+++++|.+++ ++ .+..+++|++|++++|.++.. +.+..+++|++|+|++|++++..| +++
T Consensus 11 ~~~pd~--~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~~l-~~l~~l~~L~~L~L~~N~i~~~~~--l~~ 83 (263)
T 1xeu_A 11 QVFPDP--GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQSL-AGMQFFTNLKELHLSHNQISDLSP--LKD 83 (263)
T ss_dssp HHCCSH--HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTT
T ss_pred HhCCCH--HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcccc-hHHhhCCCCCEEECCCCccCCChh--hcc
Confidence 344543 57888899999999984 44 578889999999999998854 478889999999999999986544 889
Q ss_pred CCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceee
Q 037111 178 LSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLS 257 (964)
Q Consensus 178 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 257 (964)
+++|++|+|++|++++ +|. +.. ++|++|+|++|++++. ..+..+++|++|+|++|++++. + .+..+++|++|+
T Consensus 84 l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~ 156 (263)
T 1xeu_A 84 LTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLD 156 (263)
T ss_dssp CSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEE
T ss_pred CCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEE
Confidence 9999999999999985 443 333 8889999999988864 3588888888888888888854 3 688888888888
Q ss_pred ccccccccccCCcccCccccceeeccccccccc
Q 037111 258 LSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGH 290 (964)
Q Consensus 258 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 290 (964)
|++|++++. ..+..+++|+.|++++|++++.
T Consensus 157 L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 157 LHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 888888855 5678888888888888888754
No 370
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=1.1e-18 Score=176.66 Aligned_cols=132 Identities=18% Similarity=0.288 Sum_probs=72.6
Q ss_pred cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccc
Q 037111 151 IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLT 230 (964)
Q Consensus 151 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 230 (964)
+..+++|++|++++|.++ .+..++.+++|++|++++|++++..|..++.+++|++|+|++|++++..+..++.+++|+
T Consensus 62 l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~ 139 (197)
T 4ezg_A 62 IEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVN 139 (197)
T ss_dssp GGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCC
T ss_pred HhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCC
Confidence 344444444444444333 123455555555555555555544455555555555666666665555555566666666
Q ss_pred eeeccccc-cCCCChhhhhcccccceeeccccccccccCCcccCccccceeeccccccc
Q 037111 231 KLELSNNQ-LSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLS 288 (964)
Q Consensus 231 ~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 288 (964)
+|+|++|. ++ .+| .+..+++|++|++++|++++ ++ .+..+++|++|++++|++.
T Consensus 140 ~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 140 SIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp EEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred EEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 66666665 44 333 46666666666666666663 33 4666666666666666664
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=3.6e-18 Score=172.89 Aligned_cols=155 Identities=17% Similarity=0.252 Sum_probs=132.4
Q ss_pred CcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccc
Q 037111 415 IGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLH 494 (964)
Q Consensus 415 ~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 494 (964)
...+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..+..++.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356788899999999887 455 6888899999999999775 334788899999999999999988888999999999
Q ss_pred eecCCccccCccchhhhhccccCCeecccCcc-ccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCC
Q 037111 495 YLNMSSNEFSQEIPIQLGKLVQLSELDLSHNL-LRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYN 573 (964)
Q Consensus 495 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N 573 (964)
+|++++|++++..|..++.+++|++|+|++|+ ++ .+| .+..+++|+.|+|++|++++ ++ .+..+++|+.|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCc
Confidence 99999999998889999999999999999998 65 555 68999999999999999986 33 7899999999999999
Q ss_pred cccc
Q 037111 574 ELDG 577 (964)
Q Consensus 574 ~l~~ 577 (964)
++.+
T Consensus 192 ~i~~ 195 (197)
T 4ezg_A 192 TIGG 195 (197)
T ss_dssp ----
T ss_pred ccCC
Confidence 9864
No 372
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=2.3e-19 Score=217.57 Aligned_cols=191 Identities=21% Similarity=0.214 Sum_probs=116.0
Q ss_pred cceeEEeccCCccccCCCccccCCCCcCeee-----cccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCC
Q 037111 84 SHLSYLDLNENQLYGNIPSPIGNLTKLKFLN-----LSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLK 158 (964)
Q Consensus 84 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~-----Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~ 158 (964)
+.++.|+|.+|.+.. +|..+....+|..+. ++.|.+. ..|..+..+++|++|+|++|.+...++.+..+++|+
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~ 250 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLT 250 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCSCCCGGGGGCCSCS
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCC
Confidence 568899999999986 455443333333333 3334444 457778888999999999999886666777889999
Q ss_pred EEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccc
Q 037111 159 NLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ 238 (964)
Q Consensus 159 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 238 (964)
+|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|++|++|++|+|++|.|+ .+|..|+.+++|++|+|++|.
T Consensus 251 ~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~ 327 (727)
T 4b8c_D 251 RLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNP 327 (727)
T ss_dssp CCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSC
T ss_pred EEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCc
Confidence 9999999998 78888899999999999999998 77888999999999999999887 567778889999999999999
Q ss_pred cCCCChhhhhcccc-cceeeccccccccccCCcccCccccceeecccc
Q 037111 239 LSGSIPQEIGNLKL-LTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDN 285 (964)
Q Consensus 239 l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 285 (964)
|++.+|..+..+.. +..|+|++|.+++.+|.. |+.|+++.|
T Consensus 328 l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 328 LEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred cCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 98888888766533 234788888888877753 456666666
No 373
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=2e-18 Score=189.95 Aligned_cols=221 Identities=12% Similarity=0.016 Sum_probs=159.7
Q ss_pred CCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccc----cCCCCCCCCcccccC
Q 037111 346 CTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNN----ITGGIPPEIGNATQL 421 (964)
Q Consensus 346 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~----i~~~~~~~~~~l~~L 421 (964)
|++|+.|+|.+ .++.+...+|..+++|+.|++++|.+..+...+|.++.++..+.+..+. .......+|.++..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 78888888877 7777777788888888888888887777777777777776666655432 222334455556666
Q ss_pred c-EEeccCCcc-cccCCccccccCCcceeecccccccCCCchhh-hccCCCCceecccCccccccCCCcccccccceecC
Q 037111 422 H-ELDFSSNHL-VGKVPLELANLTSLNDLILNGNQLSGGIPPEL-GLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNM 498 (964)
Q Consensus 422 ~-~L~Ls~N~l-~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 498 (964)
+ .+++....- .......-....++..+.+.++-.. .....+ ..+++|+.|+|++|+++.+.+.+|.++.+|+.|+|
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l 257 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKL 257 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEEC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEEC
Confidence 5 444443221 1001111113456667777665322 111222 24789999999999998888888999999999999
Q ss_pred CccccCccchhhhhccccCC-eecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEe
Q 037111 499 SSNEFSQEIPIQLGKLVQLS-ELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDI 570 (964)
Q Consensus 499 s~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l 570 (964)
++| ++.+.+.+|..+.+|+ .|++.+ .++...+.+|.++++|+.|+|++|+++...+.+|.++++|+.++.
T Consensus 258 ~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 258 PHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred Ccc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 998 8777788999999999 999998 777677889999999999999999999888889999999998864
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=2.2e-18 Score=173.47 Aligned_cols=131 Identities=24% Similarity=0.308 Sum_probs=83.8
Q ss_pred cEEeccCCcccccCCccccccCCcceeecccccccCCCch-hhhccCCCCceecccCccccccCCCcccccccceecCCc
Q 037111 422 HELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPP-ELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSS 500 (964)
Q Consensus 422 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 500 (964)
+.+++++|+++ .+|..+.. +|++|+|++|.|++..+. .+..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67777777775 45554432 677777777777655443 366666666666666666666666666666666666666
Q ss_pred cccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcc
Q 037111 501 NEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSI 555 (964)
Q Consensus 501 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 555 (964)
|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 6666655555666666666666666666655666666666666666666666543
No 375
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.72 E-value=2.4e-19 Score=210.70 Aligned_cols=203 Identities=17% Similarity=0.156 Sum_probs=102.3
Q ss_pred CCCCcchhhcccccccCCccccccCccccceeeccccc-------------cCCCChhhhhcccccceee-ccccccccc
Q 037111 201 NLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ-------------LSGSIPQEIGNLKLLTDLS-LSQNQLRGT 266 (964)
Q Consensus 201 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~~ 266 (964)
.+++|+.|+|++|+++ .+|..++.+++|+.|++++|. +.+..|..++.+++|+.|+ ++.|.+
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~--- 422 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL--- 422 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH---
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc---
Confidence 3444555555555554 345555555555555554443 3445566666666666666 555543
Q ss_pred cCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCC
Q 037111 267 VPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNC 346 (964)
Q Consensus 267 ~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l 346 (964)
.+|+.+.+++|.++...+ ..|+.|+|++|.|++. |. +..+++|+.|++++|.+. .+|..+.++
T Consensus 423 --------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 485 (567)
T 1dce_A 423 --------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVL-CH-LEQLLLVTHLDLSHNRLR-ALPPALAAL 485 (567)
T ss_dssp --------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSC-CC-GGGGTTCCEEECCSSCCC-CCCGGGGGC
T ss_pred --------chhhhhhhhcccccccCc------cCceEEEecCCCCCCC-cC-ccccccCcEeecCccccc-ccchhhhcC
Confidence 234445555555553211 1355666666666542 32 444444444444444444 334444444
Q ss_pred CcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCC-CCCCcccccCcEEe
Q 037111 347 TSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGI-PPEIGNATQLHELD 425 (964)
Q Consensus 347 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~-~~~~~~l~~L~~L~ 425 (964)
++|+.|+|++|.|++++ .+ ..+++|+.|+|++|.|++.. |..+..+++|+.|+
T Consensus 486 ~~L~~L~Ls~N~l~~lp--~l------------------------~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 486 RCLEVLQASDNALENVD--GV------------------------ANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp TTCCEEECCSSCCCCCG--GG------------------------TTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred CCCCEEECCCCCCCCCc--cc------------------------CCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 44444444444444421 33 34444444444444444444 55666666666667
Q ss_pred ccCCcccccCCcc---ccccCCcceeec
Q 037111 426 FSSNHLVGKVPLE---LANLTSLNDLIL 450 (964)
Q Consensus 426 Ls~N~l~~~~~~~---l~~l~~L~~L~L 450 (964)
|++|++++.+|.. +..+++|+.|++
T Consensus 540 L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 540 LQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred ecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 7777666543322 223566666653
No 376
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=1.7e-18 Score=190.55 Aligned_cols=103 Identities=13% Similarity=0.027 Sum_probs=77.5
Q ss_pred CCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccc-eEeecccccCCCCCCCCcccccCcEE
Q 037111 346 CTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLG-ILKIAGNNITGGIPPEIGNATQLHEL 424 (964)
Q Consensus 346 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~-~L~L~~n~i~~~~~~~~~~l~~L~~L 424 (964)
+++|+.++|++|.++.+....|..+.+|+.|+|.+| +..+...+|.+|.+|+ .+.+.+ .++.+.+.+|.++++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 567777777777777777777777777777777776 6666677777777777 777777 6666667778888888888
Q ss_pred eccCCcccccCCccccccCCcceeec
Q 037111 425 DFSSNHLVGKVPLELANLTSLNDLIL 450 (964)
Q Consensus 425 ~Ls~N~l~~~~~~~l~~l~~L~~L~L 450 (964)
++++|+++...+..|.++++|+.++.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EeCCCccCccchhhhcCCcchhhhcc
Confidence 88888887777777888888877753
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=8.8e-18 Score=169.08 Aligned_cols=129 Identities=25% Similarity=0.270 Sum_probs=65.8
Q ss_pred ceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCc-cccccCCcceeecccccccCCCchhhhccCCCCceeccc
Q 037111 398 GILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPL-ELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSA 476 (964)
Q Consensus 398 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 476 (964)
+.+++++|.++ .+|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 34555555554 23333222 455555555555443332 245555555555555555555455555555555555555
Q ss_pred CccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccC
Q 037111 477 NRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRG 529 (964)
Q Consensus 477 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 529 (964)
|+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|.+++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 55555555555555555555555555555555555555555555555555543
No 378
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.71 E-value=1.2e-17 Score=176.47 Aligned_cols=139 Identities=19% Similarity=0.198 Sum_probs=107.6
Q ss_pred cccccceeecCCceeEEEEEe-CCCCe--EEEEEeccccCc----------------------hhhHHHHHHHHHHHhCC
Q 037111 690 NFDESFCIGRGGYGSVYKAEL-PSGDT--VAVKKLHSFTGE----------------------TTHQKEFLSEIKALTGV 744 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~----------------------~~~~~~~~~E~~~l~~l 744 (964)
-|++.+.||+|+||.||+|.. .+|+. ||||+++..... ......+.+|+..++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367788999999999999987 67888 999987532111 01123678899999999
Q ss_pred CCCce--eeEEeeeecCceeEEEEEeccC-C----CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHh-hCCCCCeEec
Q 037111 745 RHRNI--VKFYGFCSHARHSFLVYEYLER-G----SLARILSSETATEMDWSKRVNVIKGVAHALSYMH-HECRPPIVHR 816 (964)
Q Consensus 745 ~h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~iiH~ 816 (964)
.|+++ +.++++ +..++||||+.+ | +|.++... .++..+..++.|++.|+.||| +. +|+||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~---givHr 195 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA---ELVHA 195 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS---CEECS
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 88754 344442 356899999943 4 77776532 123456789999999999999 88 99999
Q ss_pred cCCCCCeEECCCCceEEeccCccccc
Q 037111 817 DVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 817 dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
||||+|||++. .++|+|||+|...
T Consensus 196 Dlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 196 DLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999998 9999999999754
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=6.8e-17 Score=162.49 Aligned_cols=111 Identities=28% Similarity=0.326 Sum_probs=66.2
Q ss_pred CCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeecc
Q 037111 468 DLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLS 547 (964)
Q Consensus 468 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 547 (964)
+|++|+|++|+|+ .+|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 3444444444443 333445555555555555555555555556666666666666666665555566666666666666
Q ss_pred CCcCCCcccccccccccceEEEecCCcccccC
Q 037111 548 HNNLSGSIPTNFENMHGLLSIDISYNELDGPI 579 (964)
Q Consensus 548 ~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~ 579 (964)
+|+|++..+..|..+++|+.|++++|+|.|..
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 66666555556666777777777777776643
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=7.2e-17 Score=158.75 Aligned_cols=43 Identities=21% Similarity=0.111 Sum_probs=20.1
Q ss_pred cccCccccceeeccccccCCCCh---hhhhcccccceeeccccccc
Q 037111 222 SFGYLRKLTKLELSNNQLSGSIP---QEIGNLKLLTDLSLSQNQLR 264 (964)
Q Consensus 222 ~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~ 264 (964)
.+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 115 ~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 115 PLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp GGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred HHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 34444444444444444443322 24444555555555555544
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=1.9e-16 Score=155.77 Aligned_cols=133 Identities=26% Similarity=0.274 Sum_probs=100.8
Q ss_pred CCCCCEEEcCCCCCC-CCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCcccccee
Q 037111 154 LSSLKNLALDGNHLD-GPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKL 232 (964)
Q Consensus 154 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 232 (964)
.++|++|+|++|+++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 367888888888887 67777788888888888888888755 667777888888888888877677777777888888
Q ss_pred eccccccCCCC-hhhhhcccccceeeccccccccccC---CcccCccccceeeccccccc
Q 037111 233 ELSNNQLSGSI-PQEIGNLKLLTDLSLSQNQLRGTVP---SSLSNLSSLEILHLYDNQLS 288 (964)
Q Consensus 233 ~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~L~~N~l~ 288 (964)
+|++|++++.. +..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 88888887532 2677777888888888888875433 36777777888888777776
No 382
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=5.6e-16 Score=153.78 Aligned_cols=133 Identities=30% Similarity=0.375 Sum_probs=93.8
Q ss_pred CceeeceEeCCCCCeeEEecCCCCCCCccCCCccCcCcceeEEeccCCccccCCCccccCCCCcCeeecccCCccCcCCc
Q 037111 47 PCTWSGISCNHAGRIISINLTSTSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPS 126 (964)
Q Consensus 47 ~C~w~gv~C~~~~~v~~l~l~~~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 126 (964)
.|.|.++.|+..+ +..+|...+++|++|++++|++++..+..|+.+++|++|+|++|.+++..+.
T Consensus 6 ~C~~~~l~~~~~~---------------l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 70 (177)
T 2o6r_A 6 SCSGTEIRCNSKG---------------LTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDG 70 (177)
T ss_dssp EEETTEEECCSSC---------------CSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT
T ss_pred EeCCCEEEecCCC---------------CccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChh
Confidence 4889999997422 2234555567888888888888876666778888888888888888865555
Q ss_pred ccCCCCcccEEEccccccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCC
Q 037111 127 EIGLLTNLEVLHMFVNHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGS 194 (964)
Q Consensus 127 ~~~~l~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 194 (964)
.++.+++|++|++++|++++.++. +..+++|++|+|++|++++..+..+..+++|++|+|++|.+.+.
T Consensus 71 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 71 VFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred HccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 567777777777777777766654 56667777777777777655554556666677777776666643
No 383
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.65 E-value=2.5e-15 Score=168.72 Aligned_cols=219 Identities=12% Similarity=0.089 Sum_probs=132.9
Q ss_pred CCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccC
Q 037111 349 LERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSS 428 (964)
Q Consensus 349 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~ 428 (964)
|+.+.+.. .++.+....|..+++|+.++++.|+++.+....|. +.+|+.+.|..+ ++.+...+|.++++|+.+++..
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 44444443 44444444555555555555555555444444444 345555555422 4444455555555566666654
Q ss_pred CcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccc-----cccCCCcccccccceecCCcccc
Q 037111 429 NHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFS-----KSIPGNMGYLLKLHYLNMSSNEF 503 (964)
Q Consensus 429 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l 503 (964)
| ++.....+|.+ .+|+.+.| .+.++.....+|..+++|+.+++.+|.+. ...+.+|.++++|+.++|. |.+
T Consensus 236 ~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i 311 (401)
T 4fdw_A 236 N-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESI 311 (401)
T ss_dssp T-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTC
T ss_pred C-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-Cce
Confidence 3 34344455555 55666666 33344444556666666666666665553 4556677788888888887 447
Q ss_pred CccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccc-cceEEEecCCccc
Q 037111 504 SQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMH-GLLSIDISYNELD 576 (964)
Q Consensus 504 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~l~ls~N~l~ 576 (964)
+.+...+|..+.+|+.++|..| ++...+.+|.++ +|+.|++++|.+....+..|..++ .++.|.+..|.+.
T Consensus 312 ~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 312 RILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 6666777888888888888555 665666778887 888888888887766677777774 6777777766543
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=1e-16 Score=154.17 Aligned_cols=58 Identities=24% Similarity=0.179 Sum_probs=25.1
Q ss_pred CCCcchhhcccccccCC-ccccccCccccceeeccccccCCCCh---hhhhcccccceeecc
Q 037111 202 LSNLVYLFLKKNHLRGP-IPSSFGYLRKLTKLELSNNQLSGSIP---QEIGNLKLLTDLSLS 259 (964)
Q Consensus 202 l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~ 259 (964)
+++|++|++++|++++. .+..++.+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 87 l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 87 CPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 33333333434433331 12344444445555555554443333 344455555555543
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=5.8e-16 Score=153.63 Aligned_cols=133 Identities=23% Similarity=0.281 Sum_probs=85.7
Q ss_pred ceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCc
Q 037111 446 NDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHN 525 (964)
Q Consensus 446 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 525 (964)
+.+++++|+++ .+|..+ .++|+.|++++|++++..+..|..+++|++|++++|+|++..+..|+.+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 34444444444 223221 245566666666666555555666666677777777766555556677777777777777
Q ss_pred cccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcccccCCC
Q 037111 526 LLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGPIPS 581 (964)
Q Consensus 526 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~ 581 (964)
+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|+++|.+|.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 77765555667777777777777777766666667777777777777777776653
No 386
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.62 E-value=3.5e-15 Score=167.55 Aligned_cols=219 Identities=12% Similarity=0.116 Sum_probs=164.6
Q ss_pred ceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecc
Q 037111 325 LQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAG 404 (964)
Q Consensus 325 L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~ 404 (964)
|+.+.+.+ .+..+.+.+|.+|.+|+.+++.+|.++.+....|. ..+|+.+.|..+ +..+...+|.+|++|+.+.+..
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 44444443 33444556677777777777777777777777776 467777777644 6666677777777888887776
Q ss_pred cccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeeccccccc-----CCCchhhhccCCCCceecccCcc
Q 037111 405 NNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLS-----GGIPPELGLLTDLGYLDLSANRF 479 (964)
Q Consensus 405 n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l 479 (964)
| ++.+...+|.+ .+|+.++| .+.++......|.++++|+.+.+.+|.+. ...+.+|..+++|+.++|. +.+
T Consensus 236 ~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i 311 (401)
T 4fdw_A 236 N-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESI 311 (401)
T ss_dssp T-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTC
T ss_pred C-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-Cce
Confidence 4 55556667776 67888888 45566667778888888888888887764 4566788889999999998 457
Q ss_pred ccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhccccc-ccceeeccCCcCC
Q 037111 480 SKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLE-SLEKLNLSHNNLS 552 (964)
Q Consensus 480 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~ 552 (964)
+.....+|.++++|+.|+|..| ++.+...+|..+ +|+.|++++|.+....+..|.+++ +++.|++..|.+.
T Consensus 312 ~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 312 RILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 7778888999999999999665 776778889998 999999999998877777788874 7889998887654
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=2.6e-16 Score=151.26 Aligned_cols=128 Identities=23% Similarity=0.255 Sum_probs=90.4
Q ss_pred CCCCCEEEcCCCCCC-CCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCcccccee
Q 037111 154 LSSLKNLALDGNHLD-GPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKL 232 (964)
Q Consensus 154 l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 232 (964)
.++|++|++++|.++ +.+|..++.+++|++|++++|.+++. ..++++++|++|+|++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 357788888888887 67777778888888888888888755 567777777777777777776666666667777777
Q ss_pred eccccccCCC-ChhhhhcccccceeeccccccccccC---CcccCccccceeecc
Q 037111 233 ELSNNQLSGS-IPQEIGNLKLLTDLSLSQNQLRGTVP---SSLSNLSSLEILHLY 283 (964)
Q Consensus 233 ~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~L~ 283 (964)
++++|++++. .+..++.+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 7777777642 23566667777777777777764433 356666666666665
No 388
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.3e-15 Score=152.99 Aligned_cols=126 Identities=24% Similarity=0.338 Sum_probs=62.9
Q ss_pred EEeccCCccccCCCccccCCCCcCeeecccCCccCcCCcccCCCCcccEEEccccccCCcccccCCCCCCCEEEcCCCCC
Q 037111 88 YLDLNENQLYGNIPSPIGNLTKLKFLNLSSNHFSGKIPSEIGLLTNLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHL 167 (964)
Q Consensus 88 ~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l 167 (964)
.+++++|+++ .+|..+. ++|++|+|++|.|+ .+|..+..+++|++|+| ++|++
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~L-----------------------s~N~i 66 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDL-----------------------SNNRI 66 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEEC-----------------------CSSCC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEEC-----------------------CCCcC
Confidence 5666666665 3454432 45666666666655 44544444444444444 44444
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccC
Q 037111 168 DGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLS 240 (964)
Q Consensus 168 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 240 (964)
++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 67 ~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 67 STLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 4444444444444444444444444444444444444444444444444444444445555555555555554
No 389
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.59 E-value=4.8e-16 Score=169.82 Aligned_cols=139 Identities=10% Similarity=0.097 Sum_probs=99.6
Q ss_pred cccccceeecCCceeEEEEEeCCCCeEEEEEeccccCc------------hhhH--------HHHHHHHHHHhCCCCCce
Q 037111 690 NFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGE------------TTHQ--------KEFLSEIKALTGVRHRNI 749 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------~~~~--------~~~~~E~~~l~~l~h~ni 749 (964)
-|++...||+|+||.||+|..++|+.||||+++..... .... .....|...+.++.+..+
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 38899999999999999999999999999987532100 0001 112345555665544333
Q ss_pred e--eEEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECC
Q 037111 750 V--KFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDF 827 (964)
Q Consensus 750 v--~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~ 827 (964)
. ..+++ ...++||||++|++|.++... .....++.|++.++.|||++ +||||||||.|||+++
T Consensus 176 ~vp~p~~~----~~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 176 PVPEPIAQ----SRHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIRE 240 (397)
T ss_dssp SCCCEEEE----ETTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEE
T ss_pred CCCeeeec----cCceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeC
Confidence 2 22222 123799999999888765421 12356889999999999999 9999999999999988
Q ss_pred CC----------ceEEeccCcccccC
Q 037111 828 EY----------EAHVSDFGTAKLLK 843 (964)
Q Consensus 828 ~~----------~~kl~Dfg~a~~~~ 843 (964)
++ .+.|+||+-+....
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCcccccccccceEEEEeCCcccCC
Confidence 76 38999999775543
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.57 E-value=5.6e-17 Score=164.19 Aligned_cols=152 Identities=24% Similarity=0.278 Sum_probs=95.3
Q ss_pred ccCcEEeccCCcccccCCc------cccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccc
Q 037111 419 TQLHELDFSSNHLVGKVPL------ELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLK 492 (964)
Q Consensus 419 ~~L~~L~Ls~N~l~~~~~~------~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 492 (964)
..++.++++.+.+.+..|. .+..+++|++|+|++|.+++ +| .+..+++|++|+|++|.++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3444455555555544443 56666666777777666664 44 6666667777777777665 45555556667
Q ss_pred cceecCCccccCccchhhhhccccCCeecccCccccCCCC-hhcccccccceeeccCCcCCCccccc----------ccc
Q 037111 493 LHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIP-PEICNLESLEKLNLSHNNLSGSIPTN----------FEN 561 (964)
Q Consensus 493 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~----------~~~ 561 (964)
|++|+|++|+|++ +| .+..+++|+.|+|++|++++..+ ..+..+++|+.|++++|++++.+|.. +..
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~ 172 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKR 172 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHh
Confidence 7777777777764 33 46667777777777777764222 35667777777777777776655543 666
Q ss_pred cccceEEEecCCcccc
Q 037111 562 MHGLLSIDISYNELDG 577 (964)
Q Consensus 562 l~~L~~l~ls~N~l~~ 577 (964)
+++|+.|| +|+++.
T Consensus 173 l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 173 LPNLKKLD--GMPVDV 186 (198)
T ss_dssp CSSCSEEC--CGGGTT
T ss_pred CCCcEEEC--CcccCH
Confidence 77777765 555543
No 391
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.57 E-value=4.8e-14 Score=159.08 Aligned_cols=330 Identities=13% Similarity=0.060 Sum_probs=184.1
Q ss_pred CccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCcc
Q 037111 196 PSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLS 275 (964)
Q Consensus 196 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 275 (964)
..+|.++++|+.+.|..+ ++.+...+|.++++|+.+++.++ ++.....+|.++.+|+.+.+..+ +......+|.++.
T Consensus 64 ~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 64 YAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCD 140 (394)
T ss_dssp TTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCC
T ss_pred HHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccc
Confidence 345666666666666532 55444555666666666666543 33233345555555555554433 2223333344433
Q ss_pred ccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecC
Q 037111 276 SLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLE 355 (964)
Q Consensus 276 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~ 355 (964)
.++........ .....+|.++.+|+.+.+.. + +.......|.++.+|+.+.+.
T Consensus 141 ~~~~~~~~~~~--~i~~~aF~~c~~L~~i~l~~------------------------~-~~~I~~~~F~~c~~L~~i~l~ 193 (394)
T 4fs7_A 141 FKEITIPEGVT--VIGDEAFATCESLEYVSLPD------------------------S-METLHNGLFSGCGKLKSIKLP 193 (394)
T ss_dssp CSEEECCTTCC--EECTTTTTTCTTCCEEECCT------------------------T-CCEECTTTTTTCTTCCBCCCC
T ss_pred ccccccCcccc--ccchhhhcccCCCcEEecCC------------------------c-cceeccccccCCCCceEEEcC
Confidence 22222211111 11223344444444444433 2 122334556666666666666
Q ss_pred CCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccC
Q 037111 356 KNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKV 435 (964)
Q Consensus 356 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 435 (964)
.| ++.+....|.....|+.+.+..+... ....+.....|+.+.+..+ ++......+..+..|+.+.+..+... ..
T Consensus 194 ~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~ 268 (394)
T 4fs7_A 194 RN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IG 268 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-EC
T ss_pred CC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-ee
Confidence 55 55555666666666666666554322 1122334456666666433 23344456666777777777666443 55
Q ss_pred CccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccc
Q 037111 436 PLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLV 515 (964)
Q Consensus 436 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 515 (964)
...|..+..++.+.+..+.+. ...|..+.+|+.+.+..+ ++.+...+|.++.+|+.+++.++ ++.+...+|.++.
T Consensus 269 ~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~ 343 (394)
T 4fs7_A 269 GSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCT 343 (394)
T ss_dssp SCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCT
T ss_pred ccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCC
Confidence 566777777777776665433 235666777777777654 55556667777777777777644 6555566777777
Q ss_pred cCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEE
Q 037111 516 QLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSI 568 (964)
Q Consensus 516 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l 568 (964)
+|+.+++..| ++.....+|.++++|+.+++..| ++ .+..+|.+.++|+.+
T Consensus 344 ~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 344 SLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 7777777766 55555667777777777777654 33 344567777776654
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=3.3e-15 Score=147.97 Aligned_cols=133 Identities=23% Similarity=0.236 Sum_probs=82.6
Q ss_pred ccccCCcceeecccccccCCCchhhhcc-CCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccC
Q 037111 439 LANLTSLNDLILNGNQLSGGIPPELGLL-TDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQL 517 (964)
Q Consensus 439 l~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 517 (964)
+.++++|+.|+|++|.++. +|. +..+ ++|++|+|++|.+++. ..|..+++|++|+|++|+|++..+..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 3444555555555555552 232 3333 3666666666666543 456666777777777777765544555677777
Q ss_pred CeecccCccccCCCCh--hcccccccceeeccCCcCCCcccc----cccccccceEEEecCCcccc
Q 037111 518 SELDLSHNLLRGEIPP--EICNLESLEKLNLSHNNLSGSIPT----NFENMHGLLSIDISYNELDG 577 (964)
Q Consensus 518 ~~L~Ls~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~l~ls~N~l~~ 577 (964)
+.|+|++|+|+ .+|. .+..+++|+.|+|++|+++ .+|. .+..+++|+.||+++|....
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 77777777775 3444 5667777777777777776 3444 36777777777777776654
No 393
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.55 E-value=1.2e-13 Score=155.94 Aligned_cols=236 Identities=13% Similarity=0.097 Sum_probs=101.5
Q ss_pred hhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcc
Q 037111 246 EIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSL 325 (964)
Q Consensus 246 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L 325 (964)
+|.++++|+.+.+..+..+ .....|.++.+|+.+++..| ++......|.++..|+.+.+..+... +.........|
T Consensus 157 aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l 232 (394)
T 4fs7_A 157 AFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGV 232 (394)
T ss_dssp TTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCC
T ss_pred hhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCC
Confidence 4444455555554433221 23334444455555555443 22233344444444444444333221 01111122333
Q ss_pred eEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeeccc
Q 037111 326 QYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGN 405 (964)
Q Consensus 326 ~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n 405 (964)
+.+.+.+. +.......+.++..|+.+.+..+. ..+....|.....++.+....+.+. ...|..+.+|+.+.
T Consensus 233 ~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~-~~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~---- 303 (394)
T 4fs7_A 233 KNIIIPDS-FTELGKSVFYGCTDLESISIQNNK-LRIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVK---- 303 (394)
T ss_dssp CEEEECTT-CCEECSSTTTTCSSCCEEEECCTT-CEECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEE----
T ss_pred ceEEECCC-ceecccccccccccceeEEcCCCc-ceeeccccccccccceeccCceeec---cccccccccccccc----
Confidence 33333221 122233445555555555555442 2344445555555555555444322 22334444444444
Q ss_pred ccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCC
Q 037111 406 NITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPG 485 (964)
Q Consensus 406 ~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 485 (964)
+..+ ++.+...+|.++++|+.++|.++ ++.+...+|.++.+|+.+++..| ++.....
T Consensus 304 --------------------l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~ 360 (394)
T 4fs7_A 304 --------------------LLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGAN 360 (394)
T ss_dssp --------------------ECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTT
T ss_pred --------------------cccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHH
Confidence 4332 33233344444445555544322 33333444555555555555444 4444455
Q ss_pred CcccccccceecCCccccCccchhhhhccccCCe
Q 037111 486 NMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSE 519 (964)
Q Consensus 486 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 519 (964)
+|.++.+|+.+++..+ ++ .+..+|.+.++|+.
T Consensus 361 aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 361 AFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp TBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred HhhCCCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 5555556666655443 21 22344555555544
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=1.9e-16 Score=160.22 Aligned_cols=153 Identities=22% Similarity=0.251 Sum_probs=122.5
Q ss_pred CCccceEeecccccCCCCCC------CCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccC
Q 037111 394 CPQLGILKIAGNNITGGIPP------EIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLT 467 (964)
Q Consensus 394 ~~~L~~L~L~~n~i~~~~~~------~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 467 (964)
...++.++++.+.+++..|. .+..+++|++|+|++|++++ +| .+..+++|+.|+|++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34445555555555555554 77888899999999999986 56 8888999999999999998 6777888889
Q ss_pred CCCceecccCccccccCCCcccccccceecCCccccCccch-hhhhccccCCeecccCccccCCCChh----------cc
Q 037111 468 DLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIP-IQLGKLVQLSELDLSHNLLRGEIPPE----------IC 536 (964)
Q Consensus 468 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~----------~~ 536 (964)
+|++|+|++|++++. | .+..+++|++|++++|+|++..+ ..+..+++|+.|++++|.+++.+|.. +.
T Consensus 94 ~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 171 (198)
T 1ds9_A 94 TLEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK 171 (198)
T ss_dssp HCSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHH
T ss_pred cCCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHH
Confidence 999999999999863 4 58889999999999999986443 57889999999999999998765542 78
Q ss_pred cccccceeeccCCcCCC
Q 037111 537 NLESLEKLNLSHNNLSG 553 (964)
Q Consensus 537 ~l~~L~~L~Ls~N~l~~ 553 (964)
.+++|+.|| +|.++.
T Consensus 172 ~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 172 RLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HCSSCSEEC--CGGGTT
T ss_pred hCCCcEEEC--CcccCH
Confidence 899999887 777764
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=3.1e-15 Score=148.13 Aligned_cols=134 Identities=20% Similarity=0.209 Sum_probs=60.9
Q ss_pred ccCCCCcCeeecccCCccCcCCcccCCCC-cccEEEccccccCCcccccCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCc
Q 037111 104 IGNLTKLKFLNLSSNHFSGKIPSEIGLLT-NLEVLHMFVNHLNGSIPEIGHLSSLKNLALDGNHLDGPIPVSIGNLSSLV 182 (964)
Q Consensus 104 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 182 (964)
+.++++|++|+|++|+++ .+|. +..+. +|++|++++|.+++. +.++.+++|++|+|++|++++..|..++.+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 444555555555555555 2332 22222 444444444444432 3344444444444444444432222224444444
Q ss_pred EEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeeccccccCCCChh----hhhcccccceeec
Q 037111 183 GLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQLSGSIPQ----EIGNLKLLTDLSL 258 (964)
Q Consensus 183 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~L 258 (964)
+|+|++|+++ .+|. ...+..+++|++|++++|.++ .+|. .+..+++|+.|++
T Consensus 92 ~L~L~~N~i~-~~~~----------------------~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~ 147 (176)
T 1a9n_A 92 ELILTNNSLV-ELGD----------------------LDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDF 147 (176)
T ss_dssp EEECCSCCCC-CGGG----------------------GGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETT
T ss_pred EEECCCCcCC-cchh----------------------hHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCC
Confidence 4444444443 2222 014445555555555555555 2333 2555666666666
Q ss_pred cccccc
Q 037111 259 SQNQLR 264 (964)
Q Consensus 259 ~~N~l~ 264 (964)
+.|.+.
T Consensus 148 ~~n~~~ 153 (176)
T 1a9n_A 148 QKVKLK 153 (176)
T ss_dssp EECCHH
T ss_pred CcCCHH
Confidence 666554
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=4.8e-14 Score=138.45 Aligned_cols=110 Identities=24% Similarity=0.280 Sum_probs=80.7
Q ss_pred CCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccC
Q 037111 469 LGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSH 548 (964)
Q Consensus 469 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 548 (964)
.+.|++++|.++. +|..+. ++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 3456666666653 444442 6677777777777777777777788888888888888766666677788888888888
Q ss_pred CcCCCcccccccccccceEEEecCCcccccCCC
Q 037111 549 NNLSGSIPTNFENMHGLLSIDISYNELDGPIPS 581 (964)
Q Consensus 549 N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~~ 581 (964)
|+|++..+..|..+++|+.|+|++|+|++..+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 888877677788888888888888888877653
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=1.3e-13 Score=135.78 Aligned_cols=108 Identities=22% Similarity=0.285 Sum_probs=66.6
Q ss_pred CceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCC
Q 037111 470 GYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHN 549 (964)
Q Consensus 470 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 549 (964)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|+.+++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 34555555553 3444332 55666666666666655666666666666666666666544445566666777777777
Q ss_pred cCCCcccccccccccceEEEecCCcccccCC
Q 037111 550 NLSGSIPTNFENMHGLLSIDISYNELDGPIP 580 (964)
Q Consensus 550 ~l~~~~~~~~~~l~~L~~l~ls~N~l~~~~~ 580 (964)
+|++..+..|..+++|+.|+|++|+|.+..+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 6665555556666777777777777666544
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=4.7e-13 Score=131.34 Aligned_cols=86 Identities=28% Similarity=0.299 Sum_probs=45.1
Q ss_pred CCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeec
Q 037111 155 SSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLEL 234 (964)
Q Consensus 155 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 234 (964)
++|++|+|++|+|++..|..|+++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 34555555555555444555555555555555555555444444455555555555555555444444555555555555
Q ss_pred cccccC
Q 037111 235 SNNQLS 240 (964)
Q Consensus 235 ~~N~l~ 240 (964)
++|.++
T Consensus 110 ~~N~~~ 115 (170)
T 3g39_A 110 LNNPWD 115 (170)
T ss_dssp CSSCBC
T ss_pred CCCCCC
Confidence 555554
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=5.2e-13 Score=131.50 Aligned_cols=85 Identities=28% Similarity=0.367 Sum_probs=39.9
Q ss_pred CCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCCCccccCCCCcchhhcccccccCCccccccCccccceeecc
Q 037111 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNSLPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKLELS 235 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 235 (964)
+|++|+|++|+|++..|..|+++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 34 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~ 113 (174)
T 2r9u_A 34 DKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLY 113 (174)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECC
T ss_pred CCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeC
Confidence 44444444444444444444444445555555554443333334444444444444444444333344444555555555
Q ss_pred ccccC
Q 037111 236 NNQLS 240 (964)
Q Consensus 236 ~N~l~ 240 (964)
+|.+.
T Consensus 114 ~N~~~ 118 (174)
T 2r9u_A 114 NNPWD 118 (174)
T ss_dssp SSCBC
T ss_pred CCCcc
Confidence 55544
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.34 E-value=4.7e-14 Score=156.78 Aligned_cols=160 Identities=18% Similarity=0.208 Sum_probs=107.7
Q ss_pred ccCcEEeccCCcccccCCcccccc-----CCcceeecccccccCCCchhh-hccCCCCceecccCccccccCCCcc----
Q 037111 419 TQLHELDFSSNHLVGKVPLELANL-----TSLNDLILNGNQLSGGIPPEL-GLLTDLGYLDLSANRFSKSIPGNMG---- 488 (964)
Q Consensus 419 ~~L~~L~Ls~N~l~~~~~~~l~~l-----~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~---- 488 (964)
+.|+.|+|++|.|+......+... ++|++|+|++|.++......+ ..+++|+.|+|++|.+++.....+.
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456777777777764433333332 577777777777764333333 2456777888888877655444442
Q ss_pred -cccccceecCCccccCcc----chhhhhccccCCeecccCccccCCC----ChhcccccccceeeccCCcCCCc----c
Q 037111 489 -YLLKLHYLNMSSNEFSQE----IPIQLGKLVQLSELDLSHNLLRGEI----PPEICNLESLEKLNLSHNNLSGS----I 555 (964)
Q Consensus 489 -~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~----~ 555 (964)
..++|++|+|++|.|+.. ++..+..+++|++|+|++|.|++.. +..+...++|+.|+|++|.|+.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 346788888888888653 3444567788888888888887432 45566777889999999988753 3
Q ss_pred cccccccccceEEEecCCccccc
Q 037111 556 PTNFENMHGLLSIDISYNELDGP 578 (964)
Q Consensus 556 ~~~~~~l~~L~~l~ls~N~l~~~ 578 (964)
+..+...++|+.|||++|+++..
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHH
Confidence 44555678899999999988653
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.33 E-value=2.1e-14 Score=159.63 Aligned_cols=173 Identities=20% Similarity=0.141 Sum_probs=102.5
Q ss_pred CCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCc-ccccCcEEeccCCcccccCCcccc-ccCCcce
Q 037111 370 YPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIG-NATQLHELDFSSNHLVGKVPLELA-NLTSLND 447 (964)
Q Consensus 370 l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~l~-~l~~L~~ 447 (964)
.+.|+.|+|++|.++......+..+ +. ..++|++|+|++|.|++.....+. .+++|+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~--------------------L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~ 130 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAV--------------------LGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARK 130 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHH--------------------HSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEE
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHH--------------------HhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccH
Confidence 4567788888887765433222211 01 123556666666655433222222 3456666
Q ss_pred eecccccccCCCchhhh-----ccCCCCceecccCcccccc----CCCcccccccceecCCccccCccc----hhhhhcc
Q 037111 448 LILNGNQLSGGIPPELG-----LLTDLGYLDLSANRFSKSI----PGNMGYLLKLHYLNMSSNEFSQEI----PIQLGKL 514 (964)
Q Consensus 448 L~L~~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l 514 (964)
|+|++|.++......+. ..++|+.|+|++|.|++.. +..+..+++|++|+|++|+|++.. +..+...
T Consensus 131 L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~ 210 (372)
T 3un9_A 131 LGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRN 210 (372)
T ss_dssp EECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGC
T ss_pred hhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcC
Confidence 66666666543333332 3466777777777765422 223355667777788887776532 4556677
Q ss_pred ccCCeecccCccccCC----CChhcccccccceeeccCCcCCCccccccccc
Q 037111 515 VQLSELDLSHNLLRGE----IPPEICNLESLEKLNLSHNNLSGSIPTNFENM 562 (964)
Q Consensus 515 ~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 562 (964)
++|+.|+|++|.|+.. ++..+...++|++|+|++|+|+......+..+
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 262 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDL 262 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHC
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHH
Confidence 7888888888888753 23344456888889999988886655555443
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.33 E-value=3.5e-11 Score=135.55 Aligned_cols=331 Identities=9% Similarity=0.098 Sum_probs=149.5
Q ss_pred CccccCCC-CcchhhcccccccCCccccccCccccceeeccccc---cCCCChhhhhcccccceeeccccccccccCCcc
Q 037111 196 PSSIGNLS-NLVYLFLKKNHLRGPIPSSFGYLRKLTKLELSNNQ---LSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSL 271 (964)
Q Consensus 196 p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 271 (964)
..+|.++. .|+.+.+..+ ++.+...+|.++.+|+.+.++.|. ++.+...+|.++.+|+.+.+..+ ++......|
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF 133 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAF 133 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTT
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhh
Confidence 34555553 4777776643 555556677777777777776653 44333456666666666665543 332334456
Q ss_pred cCccccceeecccccccccCCcccccCccccEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCe
Q 037111 272 SNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLER 351 (964)
Q Consensus 272 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~ 351 (964)
..+.+|+.+.+..+ +.......|..+.+|+.+.+..+ ++.+....|. ...|+.+.+..+. .......|.++.+++.
T Consensus 134 ~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~-~~i~~~af~~c~~l~~ 209 (394)
T 4gt6_A 134 HHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKV-TRIGTNAFSECFALST 209 (394)
T ss_dssp TTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTC-CEECTTTTTTCTTCCE
T ss_pred hhhcccccccccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcc-cccccchhhhccccce
Confidence 66666666666543 22234455556666666665543 2322222232 1234444433221 1122233333444333
Q ss_pred eecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcc
Q 037111 352 VRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHL 431 (964)
Q Consensus 352 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l 431 (964)
.....+.........+. .......... .+.....+..+.+. +.+
T Consensus 210 ~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~-----------~~~~~~~~~~~~ip-~~v 253 (394)
T 4gt6_A 210 ITSDSESYPAIDNVLYE------------------------KSANGDYALI-----------RYPSQREDPAFKIP-NGV 253 (394)
T ss_dssp EEECCSSSCBSSSCEEE------------------------ECTTSCEEEE-----------ECCTTCCCSEEECC-TTE
T ss_pred ecccccccccccceeec------------------------cccccccccc-----------ccccccccceEEcC-Ccc
Confidence 33333222111111100 0000000000 00011112222222 122
Q ss_pred cccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhh
Q 037111 432 VGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQL 511 (964)
Q Consensus 432 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 511 (964)
+......|.++..|+.+.+.++..+ ....+|..+++|+.+.+. +.++.....+|.++.+|+.+++..+ ++.+...+|
T Consensus 254 ~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF 330 (394)
T 4gt6_A 254 ARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAF 330 (394)
T ss_dssp EEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTT
T ss_pred eEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHh
Confidence 2233344555555555555443322 333445555555555554 3344444455666666666666543 444445566
Q ss_pred hccccCCeecccCccccCCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCcc
Q 037111 512 GKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNEL 575 (964)
Q Consensus 512 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l 575 (964)
..+.+|+.+.|..+ ++.....+|.++++|+.+++.+|... -..|.....|+.+.+..|.+
T Consensus 331 ~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 331 AGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCCCCC----------
T ss_pred hCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCCE
Confidence 66666666666543 44344555666666666666665432 13455555666666655443
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.32 E-value=7.6e-11 Score=132.80 Aligned_cols=323 Identities=11% Similarity=0.099 Sum_probs=190.1
Q ss_pred CCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEecCC---CCCCCCccccCCCCcchhhcccccccCCccccccCcccccee
Q 037111 156 SLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYNNS---LPGSIPSSIGNLSNLVYLFLKKNHLRGPIPSSFGYLRKLTKL 232 (964)
Q Consensus 156 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 232 (964)
.|+.+.+..+ ++.+-..+|.++++|+.+.+..|. ++..-..+|.++.+|+.+.+..+ ++.+....|..+.+|+.+
T Consensus 65 ~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i 142 (394)
T 4gt6_A 65 VLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTV 142 (394)
T ss_dssp CCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEE
T ss_pred cCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccc
Confidence 3566666543 554555677788888888887664 44344567777888888877655 454556678888888888
Q ss_pred eccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccccEEEeeCccCc
Q 037111 233 ELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNLNSLSVGGNQFT 312 (964)
Q Consensus 233 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 312 (964)
.+..+. .......|..+..|+.+.+..+ ++..-..+|. ..+|+.+.+..+-.. ....+|..+.++.......+...
T Consensus 143 ~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~ 218 (394)
T 4gt6_A 143 TIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYP 218 (394)
T ss_dssp ECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSC
T ss_pred ccccee-eeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcccc-cccchhhhccccceecccccccc
Confidence 886543 3244567778888888888655 4423334454 356888877655433 45566777777777776665544
Q ss_pred ccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCcccc
Q 037111 313 GFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWW 392 (964)
Q Consensus 313 ~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~ 392 (964)
...-..+......... ...+.....+..+.+. +.++.+....|.....|+.+.+..+. ..+...+|.
T Consensus 219 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~-~~I~~~aF~ 285 (394)
T 4gt6_A 219 AIDNVLYEKSANGDYA-----------LIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSV-VSIGTGAFM 285 (394)
T ss_dssp BSSSCEEEECTTSCEE-----------EEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTC-CEECTTTTT
T ss_pred cccceeeccccccccc-----------ccccccccccceEEcC-CcceEcccceeeecccccEEeccccc-ceecCcccc
Confidence 2211111110000000 0011112223333332 23444555666666777777665443 234556677
Q ss_pred CCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCce
Q 037111 393 NCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYL 472 (964)
Q Consensus 393 ~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 472 (964)
+++.|+.+.+. +.++.+...+|.++.+|+.++|..+ ++.+...+|.++++|+.+.|..+ ++.+...+|.++++|+.+
T Consensus 286 ~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i 362 (394)
T 4gt6_A 286 NCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNI 362 (394)
T ss_dssp TCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEE
T ss_pred cccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEE
Confidence 77777777774 4455555667777777888887654 55556677888888888888654 555566778888888888
Q ss_pred ecccCccccccCCCcccccccceecCCcccc
Q 037111 473 DLSANRFSKSIPGNMGYLLKLHYLNMSSNEF 503 (964)
Q Consensus 473 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 503 (964)
++.+|.... ..+....+|+.+.+..|.+
T Consensus 363 ~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 363 EYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp EESSCHHHH---HTCBCCCCC----------
T ss_pred EECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 888776532 3456667788887776655
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=9.9e-12 Score=137.60 Aligned_cols=103 Identities=22% Similarity=0.176 Sum_probs=56.9
Q ss_pred eeecccc-cccCCCchhhhccCCCCceeccc-CccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccC
Q 037111 447 DLILNGN-QLSGGIPPELGLLTDLGYLDLSA-NRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSH 524 (964)
Q Consensus 447 ~L~L~~N-~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 524 (964)
.++++++ .++ .+|. +..+++|+.|+|++ |+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3455555 555 3444 55555566666654 555555555555555555555555555555555555555555555555
Q ss_pred ccccCCCChhcccccccceeeccCCcCC
Q 037111 525 NLLRGEIPPEICNLESLEKLNLSHNNLS 552 (964)
Q Consensus 525 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 552 (964)
|+|++..+..|..++ |+.|+|++|+|.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 555544333444433 555555555555
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.21 E-value=1.8e-11 Score=135.39 Aligned_cols=101 Identities=24% Similarity=0.167 Sum_probs=52.0
Q ss_pred eeecccC-CccCcCCcccCCCCcccEEEccc-cccCCcccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCCCCcEEEEec
Q 037111 112 FLNLSSN-HFSGKIPSEIGLLTNLEVLHMFV-NHLNGSIPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLSSLVGLYLYN 188 (964)
Q Consensus 112 ~L~Ls~n-~l~~~~p~~~~~l~~L~~L~l~~-n~l~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 188 (964)
.++++++ +++ .+|. +..+++|++|+|++ |++++.++. |+.|++|++|+|++|+|++..|..|++|++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3466665 666 4555 66666666666653 555555442 55555555555555555555555555555555555555
Q ss_pred CCCCCCCCccccCCCCcchhhcccccc
Q 037111 189 NSLPGSIPSSIGNLSNLVYLFLKKNHL 215 (964)
Q Consensus 189 N~l~~~~p~~~~~l~~L~~L~L~~N~l 215 (964)
|+|++..+..|..++ |++|+|.+|.+
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~ 115 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPL 115 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCc
Confidence 555533333333322 44444444433
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.19 E-value=5.2e-11 Score=126.06 Aligned_cols=146 Identities=14% Similarity=0.061 Sum_probs=113.6
Q ss_pred HHHhhcccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeE
Q 037111 685 IRSINNFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSF 763 (964)
Q Consensus 685 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 763 (964)
......|+....++.|+.+.||++... ++.+++|+...... .....+.+|+.+++.+. +..+.++++++.+.+..|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~--~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK--GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT--TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC--CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 345667888888898999999999865 78999999864211 11235778999988774 677889999999888999
Q ss_pred EEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC----------------------------------
Q 037111 764 LVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC---------------------------------- 809 (964)
Q Consensus 764 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---------------------------------- 809 (964)
+||||++|.++.+.+.. ......++.+++++++.||+..
T Consensus 87 lv~e~i~G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE 159 (263)
T ss_dssp EEEECCSSEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred EEEEecCCeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence 99999999999876421 1223468889999999999810
Q ss_pred ----------------------CCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 810 ----------------------RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 810 ----------------------~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
...++|||++|.||+++.+..+.|+||+.+.
T Consensus 160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876666799998764
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.08 E-value=3.9e-09 Score=118.15 Aligned_cols=146 Identities=11% Similarity=0.029 Sum_probs=80.3
Q ss_pred ccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeecccccCCCCCCCCccccc
Q 037111 341 KTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQ 420 (964)
Q Consensus 341 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~ 420 (964)
..+..+.+|+.+.+..+ ++.+....|.....|+.+.+..+ ++.+....|.++.+|+.+.+..+ +......+|.++++
T Consensus 211 ~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 211 YGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred cccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccc
Confidence 34444455555555432 34444455555555555555443 44444455555666666655432 33344455666666
Q ss_pred CcEEeccCCcccccCCccccccCCcceeecccccccCCCchhhhccCCCCceecccCccccccCCCccccc
Q 037111 421 LHELDFSSNHLVGKVPLELANLTSLNDLILNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLL 491 (964)
Q Consensus 421 L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 491 (964)
|+.+++.++.++.+....|.++.+|+.+.|..+ ++.+...+|.++++|+.+.+..+ ++.+...+|.+..
T Consensus 288 L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 288 LTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp CCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred cccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 666666666665555566666666666666543 44344556666666766666544 4445555665543
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.04 E-value=9.1e-09 Score=115.11 Aligned_cols=303 Identities=11% Similarity=0.050 Sum_probs=142.7
Q ss_pred cccCccccceeeccccccCCCChhhhhcccccceeeccccccccccCCcccCccccceeecccccccccCCcccccCccc
Q 037111 222 SFGYLRKLTKLELSNNQLSGSIPQEIGNLKLLTDLSLSQNQLRGTVPSSLSNLSSLEILHLYDNQLSGHIPQEIGNFMNL 301 (964)
Q Consensus 222 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 301 (964)
++....+|+.+.+..+ ++.+...+|.++.+|+.+.|..+ ++..-..+|.++ +|+.+.+..+ ++.....+|.. .+|
T Consensus 41 ~~~~~~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDL 115 (379)
T ss_dssp TGGGGGGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCC
T ss_pred ccccccCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCc
Confidence 3455566777766543 44344556777777777777543 543444455554 4666655433 33233334443 356
Q ss_pred cEEEeeCccCcccCCcccccCCcceEEEeecccccccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCC
Q 037111 302 NSLSVGGNQFTGFLPQNICQSGSLQYFSVHDNYFIGSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYN 381 (964)
Q Consensus 302 ~~L~l~~N~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 381 (964)
+.+.+..+- +......|... ++..+.+.. .++.+....|....+++.+.+..+
T Consensus 116 ~~i~lp~~~-~~i~~~~F~~~-~l~~~~~~~-------------------------~v~~i~~~~f~~~~~l~~~~~~~~ 168 (379)
T 4h09_A 116 DDFEFPGAT-TEIGNYIFYNS-SVKRIVIPK-------------------------SVTTIKDGIGYKAENLEKIEVSSN 168 (379)
T ss_dssp SEEECCTTC-CEECTTTTTTC-CCCEEEECT-------------------------TCCEECSCTTTTCTTCCEEEECTT
T ss_pred ccccCCCcc-ccccccccccc-eeeeeeccc-------------------------eeeccccchhcccccccccccccc
Confidence 666665432 22222222221 233332222 122333333444444444443332
Q ss_pred eeccc------------cCccccCCCccceEeecccccCCCCCCCCcccccCcEEeccCCcccccCCccccccCCcceee
Q 037111 382 KFYGE------------LSSNWWNCPQLGILKIAGNNITGGIPPEIGNATQLHELDFSSNHLVGKVPLELANLTSLNDLI 449 (964)
Q Consensus 382 ~i~~~------------~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~ 449 (964)
..... ....+..+..+..+.+.... .......+....+|+.+.+..+ +.......|.++..|+.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~ 246 (379)
T 4h09_A 169 NKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIA 246 (379)
T ss_dssp CSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEE
T ss_pred cceeecccceecccccceeccccccccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEE
Confidence 21100 01112223333333332221 1122334445555666555443 2334444555566666666
Q ss_pred cccccccCCCchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhhccccCCeecccCccccC
Q 037111 450 LNGNQLSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLGKLVQLSELDLSHNLLRG 529 (964)
Q Consensus 450 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 529 (964)
+..+ ++.....+|..+.+|+.+.+..+ +.......|.++.+|+.+.+.++.++.+...+|.++.+|+.++|..+ ++.
T Consensus 247 lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~ 323 (379)
T 4h09_A 247 IPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKT 323 (379)
T ss_dssp ECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCE
T ss_pred cCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccE
Confidence 6544 33344445555566666655433 33344455556666666666666555555555666666666666543 443
Q ss_pred CCChhcccccccceeeccCCcCCCccccccccc
Q 037111 530 EIPPEICNLESLEKLNLSHNNLSGSIPTNFENM 562 (964)
Q Consensus 530 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 562 (964)
....+|.++++|+.+.+..+ ++.+-..+|.+.
T Consensus 324 I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 324 IQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp ECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred EHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 44455666666666665443 443344444433
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.01 E-value=3.2e-10 Score=119.82 Aligned_cols=136 Identities=15% Similarity=0.108 Sum_probs=99.8
Q ss_pred cccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCc--eeeEEeeeecCceeEEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN--IVKFYGFCSHARHSFLVYE 767 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e 767 (964)
.+......+.|..+.||++...+|+.|++|..... ....+..|+.+++.+.+.+ +.+++++...++..++|||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e 95 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG 95 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence 44443333466679999998877888999997532 1234677888888775434 5568898888888999999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC--------------------------------------
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC-------------------------------------- 809 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-------------------------------------- 809 (964)
|++|.++. ... .+ ...++.++++++..||+..
T Consensus 96 ~i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T 1nd4_A 96 EVPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 165 (264)
T ss_dssp CCSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred ecCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence 99998884 211 11 2357778888888888752
Q ss_pred -----------------CCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 810 -----------------RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 810 -----------------~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
...++|||++|.||+++.++.+.|+|||.+.
T Consensus 166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999877667799999874
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.93 E-value=1.4e-10 Score=127.59 Aligned_cols=85 Identities=15% Similarity=0.221 Sum_probs=55.2
Q ss_pred CccccceeeccccccCCCChhhhh---cccccceeeccccccccc----cCCcccCccccceeecccccccccCCccccc
Q 037111 225 YLRKLTKLELSNNQLSGSIPQEIG---NLKLLTDLSLSQNQLRGT----VPSSLSNLSSLEILHLYDNQLSGHIPQEIGN 297 (964)
Q Consensus 225 ~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 297 (964)
.+++|++|+|++|++.+..+..+. .+++|++|+|+.|.|++. ++..+..+++|+.|+|++|.|+......+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 457788888887777644434443 467788888888888753 3344456788888888888877543333333
Q ss_pred CccccEEEeeCcc
Q 037111 298 FMNLNSLSVGGNQ 310 (964)
Q Consensus 298 l~~L~~L~l~~N~ 310 (964)
.- ...+++++++
T Consensus 330 al-g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL-PMKIDVSDSQ 341 (362)
T ss_dssp HC-CSEEECCSBC
T ss_pred Hc-CCEEEecCCc
Confidence 11 3567888776
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.92 E-value=3.3e-10 Score=124.54 Aligned_cols=131 Identities=19% Similarity=0.262 Sum_probs=78.5
Q ss_pred cCCcceeecccccccCCCchhhh--ccCCCCceeccc--Cccccc-----cCCCc--ccccccceecCCccccCccchhh
Q 037111 442 LTSLNDLILNGNQLSGGIPPELG--LLTDLGYLDLSA--NRFSKS-----IPGNM--GYLLKLHYLNMSSNEFSQEIPIQ 510 (964)
Q Consensus 442 l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~--N~l~~~-----~~~~~--~~l~~L~~L~Ls~N~l~~~~~~~ 510 (964)
+++|++|+|..|.++......+. .+++|+.|+|+. |...+. +...+ ..+++|++|+|++|.+.+..+..
T Consensus 192 ~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~ 271 (362)
T 2ra8_A 192 RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEM 271 (362)
T ss_dssp CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHH
T ss_pred CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHH
Confidence 45666666665555433333333 456666666542 111110 00111 24678888888888887554444
Q ss_pred hh---ccccCCeecccCccccCC----CChhcccccccceeeccCCcCCCcccccccc-cccceEEEecCCc
Q 037111 511 LG---KLVQLSELDLSHNLLRGE----IPPEICNLESLEKLNLSHNNLSGSIPTNFEN-MHGLLSIDISYNE 574 (964)
Q Consensus 511 ~~---~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~l~ls~N~ 574 (964)
+. .+++|+.|+|+.|.|++. ++..+..+++|+.|+|++|.|+...-..+.. + ...+|++.|+
T Consensus 272 la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 272 FLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred HHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 43 477888888888888753 2333456788889999988887554444443 2 3568888877
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.87 E-value=4.9e-09 Score=116.33 Aligned_cols=143 Identities=17% Similarity=0.244 Sum_probs=106.9
Q ss_pred ccceeecCCceeEEEEEeCCCCeEEEEEec--cccCchhhHHHHHHHHHHHhCCC--CCceeeEEeeeecC---ceeEEE
Q 037111 693 ESFCIGRGGYGSVYKAELPSGDTVAVKKLH--SFTGETTHQKEFLSEIKALTGVR--HRNIVKFYGFCSHA---RHSFLV 765 (964)
Q Consensus 693 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv 765 (964)
..+.++.|.++.||+.+.. +..+++|+.. ... .......+.+|+.+++.+. +..++++++++.+. +..++|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~-~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSK-LLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCC-CCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 4567899999999999876 4688899865 211 1122346778999988886 45688999998776 458999
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC------------------------------------
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC------------------------------------ 809 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 809 (964)
|||++|..+.+.. ...++...+..++.+++++|+.||+..
T Consensus 120 me~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 120 MEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp EECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred EEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 9999998775421 123677888899999999999999731
Q ss_pred -------------------CCCeEeccCCCCCeEECCCCc--eEEeccCcccc
Q 037111 810 -------------------RPPIVHRDVSSKNVLLDFEYE--AHVSDFGTAKL 841 (964)
Q Consensus 810 -------------------~~~iiH~dlkp~Nill~~~~~--~kl~Dfg~a~~ 841 (964)
...++|||+++.||+++.++. +.|.||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999998864
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.79 E-value=2.7e-10 Score=118.58 Aligned_cols=159 Identities=17% Similarity=0.128 Sum_probs=84.8
Q ss_pred CceeeceEeCCCC-CeeEEecCC---CCCCCccCCCccCcCcceeEEeccCCccccCCC-ccccCCCCcCe--eecccCC
Q 037111 47 PCTWSGISCNHAG-RIISINLTS---TSLKGTLDQFPFSLFSHLSYLDLNENQLYGNIP-SPIGNLTKLKF--LNLSSNH 119 (964)
Q Consensus 47 ~C~w~gv~C~~~~-~v~~l~l~~---~~l~g~l~~~~~~~~~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~--L~Ls~n~ 119 (964)
.|+|.|+.|+..+ ||+.+...+ .++.|.+.+-....+.. .|...+|.-++.++ +.|...+.|+. ++++.|.
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 4789999998654 665554433 22223332100001110 11222233333222 12444455555 5666664
Q ss_pred cc---CcCCcccCCCCcccEEEccccccCCc--ccc-cCCCCCCCEEEcCCCCCCCCCCCCCCCCC--CCcEEEEecCCC
Q 037111 120 FS---GKIPSEIGLLTNLEVLHMFVNHLNGS--IPE-IGHLSSLKNLALDGNHLDGPIPVSIGNLS--SLVGLYLYNNSL 191 (964)
Q Consensus 120 l~---~~~p~~~~~l~~L~~L~l~~n~l~~~--~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l~--~L~~L~L~~N~l 191 (964)
.. +.++....++++|++|+|++|++++. +|. +..+++|+.|+|++|+|++. ..+..++ +|++|+|++|.+
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl 232 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSL 232 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTT
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcC
Confidence 32 22222224567777777777777763 233 45677777777777777754 2333333 778888888887
Q ss_pred CCCCCc-------cccCCCCcchhh
Q 037111 192 PGSIPS-------SIGNLSNLVYLF 209 (964)
Q Consensus 192 ~~~~p~-------~~~~l~~L~~L~ 209 (964)
.+.+|. .+..+++|+.||
T Consensus 233 ~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 233 CDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred ccccCcchhHHHHHHHHCcccCeEC
Confidence 765552 255667777665
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.77 E-value=3.7e-09 Score=114.31 Aligned_cols=185 Identities=21% Similarity=0.221 Sum_probs=122.2
Q ss_pred cceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCc--eeeEEeeeecCc---eeEEEEE
Q 037111 694 SFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRN--IVKFYGFCSHAR---HSFLVYE 767 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e 767 (964)
.+.++.|....||+.. +.+++|+... ......+.+|++.++.+. +.. +.+++....... ..|+|||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 4568999999999863 5689998542 233467888999987763 322 445555544333 4589999
Q ss_pred eccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC--------------------------------------
Q 037111 768 YLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC-------------------------------------- 809 (964)
Q Consensus 768 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-------------------------------------- 809 (964)
+++|.++.+... ..++..++..++.++++.++.||+..
T Consensus 97 ~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 97 KIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred ccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 999988765332 12566777788888888888888621
Q ss_pred -----------------CCCeEeccCCCCCeEECC--CCceEEeccCcccccCCCCCCcc--cc---cc---------cc
Q 037111 810 -----------------RPPIVHRDVSSKNVLLDF--EYEAHVSDFGTAKLLKPDSSNWS--EL---AG---------TY 856 (964)
Q Consensus 810 -----------------~~~iiH~dlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~--~~---~g---------~~ 856 (964)
...++|||++|.||+++. ...+.+.||+.+....+...-.. .. .+ ..
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHc
Confidence 245899999999999998 45678999998865432110000 00 00 00
Q ss_pred cccc-ccccccCCCCcchhHHHHHHHHHHHHhCCCCC
Q 037111 857 GYVA-PELAYTMKVTEKCDVYSFGVLALEVIKGQHPK 892 (964)
Q Consensus 857 ~y~a-PE~~~~~~~~~~sDvwSlGvll~el~tg~~p~ 892 (964)
+... |+.... .....+.|++|.++|++.+|+.+|
T Consensus 253 ~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 253 KHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1111 222111 122368999999999999998775
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.60 E-value=2.5e-07 Score=100.57 Aligned_cols=138 Identities=15% Similarity=0.163 Sum_probs=101.1
Q ss_pred cccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCC----CceeeEEeeeecCceeEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH----RNIVKFYGFCSHARHSFLV 765 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lv 765 (964)
.+...+.++.|....||+. ++.+++|+... ......+.+|..+++.+.+ ..+.+++++ +..++|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lv 105 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNI 105 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEE
Confidence 5666778999999999998 67799997632 2223457889988877755 224555555 567899
Q ss_pred EEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC------------------------------------
Q 037111 766 YEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC------------------------------------ 809 (964)
Q Consensus 766 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 809 (964)
|||++|.++.+... ..++..+...++.++++.++.||+..
T Consensus 106 me~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
T 3r70_A 106 MKYIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL 181 (320)
T ss_dssp EECCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EeecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence 99999988864321 12556667778888888888888542
Q ss_pred ------------------------CCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 810 ------------------------RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 810 ------------------------~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
.+.++|+|++|.||+++.+..+.|.||+.+....
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 1245999999999999986667999999886543
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.52 E-value=1.5e-08 Score=100.54 Aligned_cols=119 Identities=17% Similarity=0.192 Sum_probs=58.7
Q ss_pred cccccCCcceeecccc-cccCC----CchhhhccCCCCceecccCccccccCCCcccccccceecCCccccCccchhhhh
Q 037111 438 ELANLTSLNDLILNGN-QLSGG----IPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNEFSQEIPIQLG 512 (964)
Q Consensus 438 ~l~~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 512 (964)
.+...++|++|+|++| .|... +...+...++|++|+|++|.|.+..... +...+.
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~--------------------l~~~L~ 90 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFA--------------------LAEMLK 90 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHH--------------------HHHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHH--------------------HHHHHH
Confidence 3445566677777666 66532 2223333445555555555554322111 122233
Q ss_pred ccccCCeecccCccccCC----CChhcccccccceeec--cCCcCCCc----ccccccccccceEEEecCCccc
Q 037111 513 KLVQLSELDLSHNLLRGE----IPPEICNLESLEKLNL--SHNNLSGS----IPTNFENMHGLLSIDISYNELD 576 (964)
Q Consensus 513 ~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L--s~N~l~~~----~~~~~~~l~~L~~l~ls~N~l~ 576 (964)
..++|++|+|++|.|+.. +...+...++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 91 ~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 91 VNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred hCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 334555555555555432 2333444455666666 55666533 2333444466666666666654
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.49 E-value=1.5e-08 Score=100.52 Aligned_cols=115 Identities=16% Similarity=0.128 Sum_probs=78.0
Q ss_pred CCcccccCcEEeccCC-ccccc----CCccccccCCcceeecccccccCC----CchhhhccCCCCceecccCcccccc-
Q 037111 414 EIGNATQLHELDFSSN-HLVGK----VPLELANLTSLNDLILNGNQLSGG----IPPELGLLTDLGYLDLSANRFSKSI- 483 (964)
Q Consensus 414 ~~~~l~~L~~L~Ls~N-~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~- 483 (964)
.+...+.|++|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|++..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3566789999999999 88653 334456678999999999999753 3344555678888888888887542
Q ss_pred ---CCCcccccccceecC--CccccCccc----hhhhhccccCCeecccCcccc
Q 037111 484 ---PGNMGYLLKLHYLNM--SSNEFSQEI----PIQLGKLVQLSELDLSHNLLR 528 (964)
Q Consensus 484 ---~~~~~~l~~L~~L~L--s~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~ 528 (964)
...+...+.|++|+| ++|.|+... ...+...++|++|+|++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 334555566777777 667776442 233334456666666666654
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.44 E-value=2.4e-08 Score=103.84 Aligned_cols=65 Identities=25% Similarity=0.319 Sum_probs=27.0
Q ss_pred cccCCeecccCccccC--CCChhcccccccceeeccCCcCCCcccccccccc--cceEEEecCCcccccCC
Q 037111 514 LVQLSELDLSHNLLRG--EIPPEICNLESLEKLNLSHNNLSGSIPTNFENMH--GLLSIDISYNELDGPIP 580 (964)
Q Consensus 514 l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~--~L~~l~ls~N~l~~~~~ 580 (964)
+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. .|+.|+|++|++++.+|
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 3444444444444443 1223333444444444444444432 1122222 44444444444444333
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.26 E-value=2.2e-06 Score=91.11 Aligned_cols=77 Identities=18% Similarity=0.200 Sum_probs=60.1
Q ss_pred cccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCC---ceeeEEeeeecCceeEEEEEe
Q 037111 692 DESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHR---NIVKFYGFCSHARHSFLVYEY 768 (964)
Q Consensus 692 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~ 768 (964)
...+.|+.|.++.||+++..+|+.|+||+.... .......+..|++.++.+.+. .+++++++. ..++||||
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~--~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~ 91 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDD--APALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTT--CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCC--CcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEe
Confidence 446789999999999999888999999986432 122235688999999998764 577888763 46899999
Q ss_pred ccCCCH
Q 037111 769 LERGSL 774 (964)
Q Consensus 769 ~~~gsL 774 (964)
++|+++
T Consensus 92 l~g~~~ 97 (288)
T 3d1u_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred cccCCC
Confidence 999864
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.26 E-value=5.9e-06 Score=87.33 Aligned_cols=134 Identities=15% Similarity=0.173 Sum_probs=97.9
Q ss_pred eeecCCce-eEEEEEeC-CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEEEEEeccCC
Q 037111 696 CIGRGGYG-SVYKAELP-SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFLVYEYLERG 772 (964)
Q Consensus 696 ~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g 772 (964)
.+..|..| .||+.... ++..+++|+-.. .....+.+|...++.+. +--+.++++++.+.+..++|||+++|.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 45556666 68998765 456789998542 23456788999887774 334778899999999999999999998
Q ss_pred CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCC-------------------------------------------
Q 037111 773 SLARILSSETATEMDWSKRVNVIKGVAHALSYMHHEC------------------------------------------- 809 (964)
Q Consensus 773 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------------- 809 (964)
++.+...... .....++.+++..++.||+..
T Consensus 106 ~~~~~~~~~~------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 106 TAFQVLEEYP------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp EHHHHHHHCG------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred cccccccCCH------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 8877653321 223456667777777777531
Q ss_pred ------------CCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 810 ------------RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 810 ------------~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
...++|||+.+.||+++.++.+-|.||+.+.
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1237999999999999987777899999874
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.21 E-value=7.7e-06 Score=88.02 Aligned_cols=137 Identities=15% Similarity=0.163 Sum_probs=94.2
Q ss_pred cceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCC---ceeeEEeeee-cCceeEEEEEec
Q 037111 694 SFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHR---NIVKFYGFCS-HARHSFLVYEYL 769 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~ 769 (964)
.+.++.|....||+. ++.+++|+-. .......+..|+.+++.+.+. .+.+++.++. ..+..++||||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 456888999999998 5778999843 223346788999999888642 3566677664 456688999999
Q ss_pred cCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhC-----------------------------------------
Q 037111 770 ERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHE----------------------------------------- 808 (964)
Q Consensus 770 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~----------------------------------------- 808 (964)
+|.++.+..-. .++......++.++++.++.||+.
T Consensus 96 ~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 96 QGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp CSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred CCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 99887663211 123344444555555555555542
Q ss_pred ----------------CCCCeEeccCCCCCeEECC---CCc-eEEeccCccccc
Q 037111 809 ----------------CRPPIVHRDVSSKNVLLDF---EYE-AHVSDFGTAKLL 842 (964)
Q Consensus 809 ----------------~~~~iiH~dlkp~Nill~~---~~~-~kl~Dfg~a~~~ 842 (964)
..+.++|||++|.||+++. ++. +.|.||+.+...
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2335799999999999987 455 489999988643
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.07 E-value=1.6e-05 Score=87.48 Aligned_cols=144 Identities=13% Similarity=0.186 Sum_probs=90.2
Q ss_pred ccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCC--ceeeEEeeeecC-ceeEEEEE
Q 037111 691 FDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHR--NIVKFYGFCSHA-RHSFLVYE 767 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~-~~~~lv~e 767 (964)
....+.++.|....+|+.+. +++.+++|..... ..+..|+..++.+... .+.++++++... +..|+|||
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e 114 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISR 114 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEE
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEE
Confidence 44566789999999999986 4788999986421 2477888888777543 356777776654 67899999
Q ss_pred eccCCCHHHH---------------h---hhcCCC---C------------CCHHHH---------------------HH
Q 037111 768 YLERGSLARI---------------L---SSETAT---E------------MDWSKR---------------------VN 793 (964)
Q Consensus 768 ~~~~gsL~~~---------------l---~~~~~~---~------------l~~~~~---------------------~~ 793 (964)
|++|.++.+. + +..... . -.|... ..
T Consensus 115 ~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~ 194 (362)
T 3ovc_A 115 RAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSAS 194 (362)
T ss_dssp CCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHH
T ss_pred ecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 9998655321 1 111000 0 001101 01
Q ss_pred HHHHHHHHHHHHhhC-CCCCeEeccCCCCCeEECCCCceEEeccCccccc
Q 037111 794 VIKGVAHALSYMHHE-CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLL 842 (964)
Q Consensus 794 i~~~i~~~l~~LH~~-~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~ 842 (964)
....+....+++... ..+.++|+|+.+.||+++.++.+.|.||+.+...
T Consensus 195 ~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 195 VAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 111222222333221 1246899999999999987777889999988654
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.90 E-value=9.4e-06 Score=89.60 Aligned_cols=82 Identities=6% Similarity=0.004 Sum_probs=54.6
Q ss_pred ccee-ecCCceeEEEEEeC-------CCCeEEEEEeccccC-chhhHHHHHHHHHHHhCCC-C--CceeeEEeeeecC--
Q 037111 694 SFCI-GRGGYGSVYKAELP-------SGDTVAVKKLHSFTG-ETTHQKEFLSEIKALTGVR-H--RNIVKFYGFCSHA-- 759 (964)
Q Consensus 694 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~-- 759 (964)
.+.| +.|....+|+.... +++.+++|+...... .......+..|+.+++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4567 88889999998654 266888987643210 0001134667888877764 2 3567788887665
Q ss_pred -ceeEEEEEeccCCCHH
Q 037111 760 -RHSFLVYEYLERGSLA 775 (964)
Q Consensus 760 -~~~~lv~e~~~~gsL~ 775 (964)
+..++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 4578999999987654
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.87 E-value=2.8e-06 Score=81.67 Aligned_cols=81 Identities=12% Similarity=0.075 Sum_probs=33.9
Q ss_pred CCceecccCccccccCCCcccccccceecCCccc-cCccchhhhhcc----ccCCeecccCcc-ccCCCChhcccccccc
Q 037111 469 LGYLDLSANRFSKSIPGNMGYLLKLHYLNMSSNE-FSQEIPIQLGKL----VQLSELDLSHNL-LRGEIPPEICNLESLE 542 (964)
Q Consensus 469 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~ 542 (964)
|+.|||+++.+++..-..+.++++|+.|+|++|. |++..-..++.+ ++|++|+|++|. |+..--..+..+++|+
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~ 142 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLK 142 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCC
Confidence 3333333333333333333344444444444442 443333333332 245555555542 4433333344455555
Q ss_pred eeeccCC
Q 037111 543 KLNLSHN 549 (964)
Q Consensus 543 ~L~Ls~N 549 (964)
.|+|+++
T Consensus 143 ~L~L~~c 149 (176)
T 3e4g_A 143 YLFLSDL 149 (176)
T ss_dssp EEEEESC
T ss_pred EEECCCC
Confidence 5555554
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.77 E-value=6.1e-06 Score=79.35 Aligned_cols=88 Identities=15% Similarity=0.117 Sum_probs=46.4
Q ss_pred ccCcEEeccCCcccccCCccccccCCcceeeccccc-ccCCCchhhhccCCCCceecccCccccccCCCcccccccceec
Q 037111 419 TQLHELDFSSNHLVGKVPLELANLTSLNDLILNGNQ-LSGGIPPELGLLTDLGYLDLSANRFSKSIPGNMGYLLKLHYLN 497 (964)
Q Consensus 419 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 497 (964)
..|+.||++++.|++..-..+..+++|++|+|++|. |++..-..+..++ ...++|++|+
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~--------------------~~~~~L~~L~ 120 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLE--------------------NLQKSMLEME 120 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCH--------------------HHHHHCCEEE
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcc--------------------cccCCCCEEE
Confidence 346666666666655444445555555555555553 4432222222210 0013566666
Q ss_pred CCccc-cCccchhhhhccccCCeecccCcc
Q 037111 498 MSSNE-FSQEIPIQLGKLVQLSELDLSHNL 526 (964)
Q Consensus 498 Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~N~ 526 (964)
|++|. ||+..-..+.++++|+.|+|+++.
T Consensus 121 Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 121 IISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp EESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred cCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 66653 665555556666777777777764
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.65 E-value=0.00017 Score=78.89 Aligned_cols=139 Identities=22% Similarity=0.297 Sum_probs=78.2
Q ss_pred ceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCC-----CCCceeeEE-e--eeecCceeEEEE
Q 037111 695 FCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGV-----RHRNIVKFY-G--FCSHARHSFLVY 766 (964)
Q Consensus 695 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~-~--~~~~~~~~~lv~ 766 (964)
+.|+.|..+.||+....+| .+++|+... .. ..+..|+.+++.+ ..|.++... | +....+..++||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~---~~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHR---PE---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECS---CH---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCC---CH---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence 4566677899999987654 589998864 11 2233444444433 234443311 1 123456789999
Q ss_pred EeccCCCHH-----------HH---hhh--cCC--C--------CCCHHHH-----------------------------
Q 037111 767 EYLERGSLA-----------RI---LSS--ETA--T--------EMDWSKR----------------------------- 791 (964)
Q Consensus 767 e~~~~gsL~-----------~~---l~~--~~~--~--------~l~~~~~----------------------------- 791 (964)
||++|.++. +. ++. ... . ...|...
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 999986542 11 111 100 0 0122211
Q ss_pred --HHHHHHHHHHHHHHhh----------CCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 792 --VNVIKGVAHALSYMHH----------ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 792 --~~i~~~i~~~l~~LH~----------~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
..+..++..++++|+. .....++|||+++.||+++.++.+.|.||+.+.
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1111234446666763 124589999999999999888899999999774
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.62 E-value=0.0003 Score=75.16 Aligned_cols=138 Identities=18% Similarity=0.197 Sum_probs=92.0
Q ss_pred ccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC---CCceeeEEeeeecCceeEEEEEec
Q 037111 693 ESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR---HRNIVKFYGFCSHARHSFLVYEYL 769 (964)
Q Consensus 693 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~ 769 (964)
..+.|+.|....+|+... +++.+++|+.... ....+..|++.++.+. ...++++++++...+..++||||+
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 356789999999999987 4778999986421 2466788988888773 366888999888888999999999
Q ss_pred cCCCHH--------HH---hhhcCC-C-------------------CCCHHHHH---HHHH----------------HHH
Q 037111 770 ERGSLA--------RI---LSSETA-T-------------------EMDWSKRV---NVIK----------------GVA 799 (964)
Q Consensus 770 ~~gsL~--------~~---l~~~~~-~-------------------~l~~~~~~---~i~~----------------~i~ 799 (964)
+|..+. +. ++.... . .-+|.... ++.. .++
T Consensus 114 ~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~ 193 (312)
T 3jr1_A 114 NKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIV 193 (312)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 997542 11 122111 0 02344321 1111 111
Q ss_pred H-HHHHHhh-CCCCCeEeccCCCCCeEECCCCceEEeccC
Q 037111 800 H-ALSYMHH-ECRPPIVHRDVSSKNVLLDFEYEAHVSDFG 837 (964)
Q Consensus 800 ~-~l~~LH~-~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg 837 (964)
+ ....|.. ..++.++|+|+.+.|++++.++ +.|.|++
T Consensus 194 ~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 194 QIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 1223432 2256899999999999999887 8888974
No 428
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.62 E-value=0.00014 Score=81.47 Aligned_cols=77 Identities=16% Similarity=0.110 Sum_probs=48.2
Q ss_pred cceeecCCceeEEEEEeC-CCCeEEEEEeccccC---c--hhhHHHHHHHHHHHhCCCC--C-ceeeEEeeeecCceeEE
Q 037111 694 SFCIGRGGYGSVYKAELP-SGDTVAVKKLHSFTG---E--TTHQKEFLSEIKALTGVRH--R-NIVKFYGFCSHARHSFL 764 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~--~~~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~~~l 764 (964)
.+.+|.|..+.||+++.. +++.|+||....... . ......+..|.++++.+.. | .+.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457999999999999754 468899998653211 0 1122345668777776531 3 34456654 3445689
Q ss_pred EEEeccCC
Q 037111 765 VYEYLERG 772 (964)
Q Consensus 765 v~e~~~~g 772 (964)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.53 E-value=2.1e-05 Score=77.07 Aligned_cols=15 Identities=33% Similarity=0.563 Sum_probs=7.0
Q ss_pred cccccceEEEecCCc
Q 037111 560 ENMHGLLSIDISYNE 574 (964)
Q Consensus 560 ~~l~~L~~l~ls~N~ 574 (964)
..-+.|+.|++++|.
T Consensus 154 ~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 154 EENESLLRVGISFAS 168 (197)
T ss_dssp HHCSSCCEEECCCCC
T ss_pred HhCCCcCeEeccCCC
Confidence 333445555554443
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.50 E-value=2.9e-05 Score=76.12 Aligned_cols=64 Identities=14% Similarity=0.209 Sum_probs=31.1
Q ss_pred cccCcEEeccCC-ccccc----CCccccccCCcceeecccccccCC----CchhhhccCCCCceecccCcccc
Q 037111 418 ATQLHELDFSSN-HLVGK----VPLELANLTSLNDLILNGNQLSGG----IPPELGLLTDLGYLDLSANRFSK 481 (964)
Q Consensus 418 l~~L~~L~Ls~N-~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~ 481 (964)
-+.|++|+|++| +|... +...+..-+.|+.|+|++|.|.+. +.+.+...+.|+.|+|++|.|++
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 345566666653 55321 222333445566666666655522 22333344555555555555543
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.34 E-value=0.00082 Score=75.67 Aligned_cols=78 Identities=12% Similarity=0.058 Sum_probs=49.1
Q ss_pred CCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcccccc--ccccccccccccC---CCCcchhHHHHHHHHHH
Q 037111 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAG--TYGYVAPELAYTM---KVTEKCDVYSFGVLALE 884 (964)
Q Consensus 810 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g--~~~y~aPE~~~~~---~~~~~sDvwSlGvll~e 884 (964)
.+.++|||++|.||+++.++ +++.||+.+....+... ...... ...|.+|+..... ......++......+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D-la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD-IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH-HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH-HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 34899999999999998876 99999998865332211 011111 1345666654311 11234556688888888
Q ss_pred HHhCC
Q 037111 885 VIKGQ 889 (964)
Q Consensus 885 l~tg~ 889 (964)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87754
No 432
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.34 E-value=0.00035 Score=74.21 Aligned_cols=79 Identities=18% Similarity=0.191 Sum_probs=55.9
Q ss_pred cccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-C--CceeeEEeeeecCceeEEEE
Q 037111 690 NFDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-H--RNIVKFYGFCSHARHSFLVY 766 (964)
Q Consensus 690 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~~~lv~ 766 (964)
+...+..+|.|..+.||+.+..+|++|++|+...... .....|..|+..++.+. . --+.+++++. ..++||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~ 89 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc--chhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEE
Confidence 4556778999999999999999999999998653221 22245778988887763 2 2345555542 347899
Q ss_pred EeccCCCH
Q 037111 767 EYLERGSL 774 (964)
Q Consensus 767 e~~~~gsL 774 (964)
||++++..
T Consensus 90 e~l~~~~~ 97 (288)
T 3f7w_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EeecccCC
Confidence 99987643
No 433
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.00 E-value=0.0014 Score=71.19 Aligned_cols=142 Identities=18% Similarity=0.176 Sum_probs=72.9
Q ss_pred ceeecCCcee-EEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC--CCceeeEEeeeecCceeEEEEEeccC
Q 037111 695 FCIGRGGYGS-VYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR--HRNIVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 695 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
+.|+.|.... +|+....+++.+++|....... ..+..|+.+++.+. .-.+.+++.+..+.+ ++|||++.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~-----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~ 96 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG-----GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGD 96 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT-----CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCS
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC-----ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCC
Confidence 4566565554 6787764477788876543210 12334555555442 123556666644333 789999977
Q ss_pred CCHHHHhhhcC---------------------C---CCCCHHHHH-------HH-------------HHHHHHHHHHHh-
Q 037111 772 GSLARILSSET---------------------A---TEMDWSKRV-------NV-------------IKGVAHALSYMH- 806 (964)
Q Consensus 772 gsL~~~l~~~~---------------------~---~~l~~~~~~-------~i-------------~~~i~~~l~~LH- 806 (964)
..+.+++.... . ...+..... .+ ...+..+++.+.
T Consensus 97 ~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~ 176 (333)
T 3csv_A 97 ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILS 176 (333)
T ss_dssp CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 66655442110 0 011111100 00 011112222221
Q ss_pred --hCCCCCeEeccCCCCCeEECCC----CceEEeccCcccccC
Q 037111 807 --HECRPPIVHRDVSSKNVLLDFE----YEAHVSDFGTAKLLK 843 (964)
Q Consensus 807 --~~~~~~iiH~dlkp~Nill~~~----~~~kl~Dfg~a~~~~ 843 (964)
......++|||+.+.||+++.+ +.+.|.||+.+....
T Consensus 177 ~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 177 AQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp HHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred hcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 1124479999999999999875 679999999886543
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.98 E-value=0.0007 Score=61.97 Aligned_cols=58 Identities=19% Similarity=0.225 Sum_probs=39.1
Q ss_pred eecccCcccc-CCCChhcccccccceeeccCCcCCCcccccccccccceEEEecCCccccc
Q 037111 519 ELDLSHNLLR-GEIPPEICNLESLEKLNLSHNNLSGSIPTNFENMHGLLSIDISYNELDGP 578 (964)
Q Consensus 519 ~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ls~N~l~~~ 578 (964)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|+|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~Cd 70 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCD 70 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCS
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeecc
Confidence 5666666665 23443332 3577778888887776677777778888888888877664
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.85 E-value=0.015 Score=62.77 Aligned_cols=157 Identities=13% Similarity=0.131 Sum_probs=87.1
Q ss_pred ccHHHHHHHhhcccc-----cceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCC--Cceee
Q 037111 679 LVYEEIIRSINNFDE-----SFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRH--RNIVK 751 (964)
Q Consensus 679 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~ 751 (964)
++.+.+......|.. ...++ |....||+....+|+.+++|....... ....+..|...++.+.. -.+++
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~---~~~~~~~E~~~~~~L~~~g~~vp~ 86 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW---TADQILEEHQFALQLVNDEVPVAA 86 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS---CHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC---CHHHHHHHHHHHHHHHHcCCeecc
Confidence 344455555554432 23566 888899999877787899999753211 23455667777665531 12344
Q ss_pred EEee-----eecCceeEEEEEeccCCCHH-----------HH---hhh--c--C---CCCCCHHHH----HHH-------
Q 037111 752 FYGF-----CSHARHSFLVYEYLERGSLA-----------RI---LSS--E--T---ATEMDWSKR----VNV------- 794 (964)
Q Consensus 752 l~~~-----~~~~~~~~lv~e~~~~gsL~-----------~~---l~~--~--~---~~~l~~~~~----~~i------- 794 (964)
++.. ....+..++||||++|..+. +. ++. . . ....++... ..+
T Consensus 87 ~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (328)
T 1zyl_A 87 PVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLI 166 (328)
T ss_dssp CCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSS
T ss_pred eeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcC
Confidence 4443 12245668899999885431 11 111 0 0 011222111 001
Q ss_pred --------HHHHHHHHHHHhhC----CCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 795 --------IKGVAHALSYMHHE----CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 795 --------~~~i~~~l~~LH~~----~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
...+...++.+... ....++|||+++.||+++ + .+.+.||+.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 167 PSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111223333221 234689999999999999 4 899999988754
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.83 E-value=0.0097 Score=64.02 Aligned_cols=157 Identities=11% Similarity=0.121 Sum_probs=85.3
Q ss_pred ccHHHHHHHhhcccc-----cceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCc--eee
Q 037111 679 LVYEEIIRSINNFDE-----SFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN--IVK 751 (964)
Q Consensus 679 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~ 751 (964)
++.+++......|.. .+.|+.|....+|+....+| .+++|...... . ...+..|+.+++.+.... +.+
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~-~---~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV-E---KNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC-C---HHHHHHHHHHHHHHHHCCCCCCc
Confidence 344555555555654 34566788899999987655 68899876421 1 123445666655442111 233
Q ss_pred EEee------eecCceeEEEEEeccCCCHHH-----------H---hhhc--C-CCC----C---CHHHHHH--------
Q 037111 752 FYGF------CSHARHSFLVYEYLERGSLAR-----------I---LSSE--T-ATE----M---DWSKRVN-------- 793 (964)
Q Consensus 752 l~~~------~~~~~~~~lv~e~~~~gsL~~-----------~---l~~~--~-~~~----l---~~~~~~~-------- 793 (964)
++.. ....+..++||+|++|..+.. . ++.. . ..+ . .|.....
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 3321 122456789999999864321 1 1111 0 000 1 1221110
Q ss_pred ----HHHHHHHHHHHHhhC----CCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 794 ----VIKGVAHALSYMHHE----CRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 794 ----i~~~i~~~l~~LH~~----~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
+...+.+.+++++.. ...+++|+|+++.||+++.++.+.+.||+.+.
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244455555532 23479999999999999887666899998774
No 437
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.76 E-value=0.0088 Score=63.71 Aligned_cols=138 Identities=14% Similarity=0.099 Sum_probs=73.7
Q ss_pred ccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCce-eeEEeeeecCceeEEEEEec-c
Q 037111 693 ESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNI-VKFYGFCSHARHSFLVYEYL-E 770 (964)
Q Consensus 693 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~ 770 (964)
-.+.|+.|....+|+. +.+++|+........ ....+|+..++.+....+ .++++++ .+.-++|+||+ +
T Consensus 22 ~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~---~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~ 91 (301)
T 3dxq_A 22 GPLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY---INRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAG 91 (301)
T ss_dssp SCEEEESCSSEEEEEE-----TTEEEEEECC----C---CCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTT
T ss_pred ceeEcCCcccccccee-----eeEEEECCCCCccce---eCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCC
Confidence 3678999999999999 568899875321111 112356666655532122 4555554 33347899999 5
Q ss_pred CCCHHHH---------------h---hhcCC---CCCC-HHHHHHHHHH--------------HHHHH----HHHhh-CC
Q 037111 771 RGSLARI---------------L---SSETA---TEMD-WSKRVNVIKG--------------VAHAL----SYMHH-EC 809 (964)
Q Consensus 771 ~gsL~~~---------------l---~~~~~---~~l~-~~~~~~i~~~--------------i~~~l----~~LH~-~~ 809 (964)
|.++... + +.... .... +..+..+... +.+.+ +.+.. ..
T Consensus 92 g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 171 (301)
T 3dxq_A 92 AQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPL 171 (301)
T ss_dssp CEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCC
T ss_pred CccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCC
Confidence 5444210 0 11110 0001 1111111110 11111 11111 12
Q ss_pred CCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 810 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
...++|+|+.+.||+ ..++.+.++||..+..
T Consensus 172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 345899999999999 5677889999998764
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.65 E-value=0.0038 Score=68.51 Aligned_cols=140 Identities=14% Similarity=0.195 Sum_probs=82.9
Q ss_pred cceeecCCceeEEEEEeC--------CCCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEE
Q 037111 694 SFCIGRGGYGSVYKAELP--------SGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 764 (964)
.+.+..|-...+|++... +++.|++|+.... ......+.+|..+++.+. +.-..++++++.+ .+
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~---~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~ 127 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI---LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GR 127 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc---cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----cc
Confidence 356777888899999875 2478999985321 122345668888887774 3334677777654 29
Q ss_pred EEEeccCCCHHH--------------Hh---hhcC---CCCCC--HHHHHHHHHHHHH-------------------HHH
Q 037111 765 VYEYLERGSLAR--------------IL---SSET---ATEMD--WSKRVNVIKGVAH-------------------ALS 803 (964)
Q Consensus 765 v~e~~~~gsL~~--------------~l---~~~~---~~~l~--~~~~~~i~~~i~~-------------------~l~ 803 (964)
||||++|.++.. .+ +... ..... +.++.++..++.. .++
T Consensus 128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 207 (379)
T 3feg_A 128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG 207 (379)
T ss_dssp EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence 999999865431 11 1110 11122 3455555544322 223
Q ss_pred HH----hhC-CCCCeEeccCCCCCeEECCC----CceEEeccCccc
Q 037111 804 YM----HHE-CRPPIVHRDVSSKNVLLDFE----YEAHVSDFGTAK 840 (964)
Q Consensus 804 ~L----H~~-~~~~iiH~dlkp~Nill~~~----~~~kl~Dfg~a~ 840 (964)
.| ... ....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 33 221 23468999999999999876 789999999875
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.57 E-value=0.0016 Score=59.60 Aligned_cols=56 Identities=21% Similarity=0.278 Sum_probs=34.7
Q ss_pred eecCCccccC-ccchhhhhccccCCeecccCccccCCCChhcccccccceeeccCCcCC
Q 037111 495 YLNMSSNEFS-QEIPIQLGKLVQLSELDLSHNLLRGEIPPEICNLESLEKLNLSHNNLS 552 (964)
Q Consensus 495 ~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 552 (964)
.++.+++.++ ..+|..+. .+|+.|+|++|+|+...+..|..+++|+.|+|++|++.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4556666664 13343322 35677777777777555556677777777777777775
No 440
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.50 E-value=0.005 Score=69.15 Aligned_cols=72 Identities=17% Similarity=0.152 Sum_probs=48.6
Q ss_pred cceeecCCceeEEEEEeCC--------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEE
Q 037111 694 SFCIGRGGYGSVYKAELPS--------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 764 (964)
.+.|+.|....||++...+ ++.|++|+.... . ....+..|..+++.+. +.-..++++.+.+ .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~---~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~ 149 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-E---TESHLVAESVIFTLLSERHLGPKLYGIFSG----GR 149 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-C---CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-C---cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CE
Confidence 4568889899999998753 578999987421 1 1134557888887774 3223667776643 38
Q ss_pred EEEeccCCC
Q 037111 765 VYEYLERGS 773 (964)
Q Consensus 765 v~e~~~~gs 773 (964)
|+||++|.+
T Consensus 150 v~e~l~G~~ 158 (429)
T 1nw1_A 150 LEEYIPSRP 158 (429)
T ss_dssp EECCCCEEE
T ss_pred EEEEeCCcc
Confidence 999998743
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.26 E-value=0.014 Score=65.92 Aligned_cols=74 Identities=19% Similarity=0.090 Sum_probs=46.3
Q ss_pred cceeecCCceeEEEEEeCC-CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCc-eeeEEeeeecCceeEEEEEeccC
Q 037111 694 SFCIGRGGYGSVYKAELPS-GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN-IVKFYGFCSHARHSFLVYEYLER 771 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~~~ 771 (964)
.+.|+.|-...+|++...+ ++.|++|+......... .-.+|..+++.+...+ ..++++++.. ..||||++|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i---dR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII---NREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS---CHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc---CHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCC
Confidence 4568889899999998764 47788888643211111 1146878777775333 3577777732 359999987
Q ss_pred CCH
Q 037111 772 GSL 774 (964)
Q Consensus 772 gsL 774 (964)
.++
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 543
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.98 E-value=0.04 Score=59.68 Aligned_cols=32 Identities=25% Similarity=0.362 Sum_probs=28.0
Q ss_pred CCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 810 RPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 810 ~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
...++|+|+.+.||+++.++.+.+.||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 34799999999999999888899999987754
No 443
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.57 E-value=0.062 Score=52.76 Aligned_cols=100 Identities=19% Similarity=0.173 Sum_probs=65.3
Q ss_pred CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCcccccCCCCCCcccc
Q 037111 773 SLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSEL 852 (964)
Q Consensus 773 sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 852 (964)
+|.+.|...+ .++++++++.++.|.+.+|.-+-.... + ..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 34 SLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred cHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc------------
Confidence 8999997654 569999999999999999877622100 1 1222357899999999988764 1110
Q ss_pred ccccccccccccccCCCCcchhHHHHHHHHHHHHhCC
Q 037111 853 AGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQ 889 (964)
Q Consensus 853 ~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~ 889 (964)
.....+.|||... ...+.+.=|||+|+++|.-+-=.
T Consensus 98 ~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDyg 133 (229)
T 2yle_A 98 AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYG 133 (229)
T ss_dssp ---------CCSS-SSSCHHHHHHHHHHHHHHHHTTT
T ss_pred ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcC
Confidence 1122466888763 34678899999999999998533
No 444
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.45 E-value=0.039 Score=60.57 Aligned_cols=74 Identities=12% Similarity=0.076 Sum_probs=42.2
Q ss_pred cceeecCCceeEEEEEeCC---------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCc-eeeEEeeeecCceeE
Q 037111 694 SFCIGRGGYGSVYKAELPS---------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRN-IVKFYGFCSHARHSF 763 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~ 763 (964)
...++.|....+|+....+ ++.|++|+...... .......|...++.+.... +.++++.+. -+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~---~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~ 110 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD---ELYNTISEFEVYKTMSKYKIAPQLLNTFN----GG 110 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG---GTSCHHHHHHHHHHHHHTTSSCCEEEEET----TE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc---ceecHHHHHHHHHHHHhcCCCCceEEecC----Cc
Confidence 3467788888999997653 26888887643211 1112346777766664222 446665542 36
Q ss_pred EEEEeccCCCH
Q 037111 764 LVYEYLERGSL 774 (964)
Q Consensus 764 lv~e~~~~gsL 774 (964)
+||||++|.++
T Consensus 111 ~v~e~i~G~~l 121 (369)
T 3c5i_A 111 RIEEWLYGDPL 121 (369)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEecCCcC
Confidence 89999987543
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.08 E-value=0.044 Score=60.25 Aligned_cols=143 Identities=15% Similarity=0.197 Sum_probs=82.6
Q ss_pred cceeecCCceeEEEEEeCC--------CCeEEEEEeccccCc---------hhhH-------HHHHHHHHHHhCCC-CCc
Q 037111 694 SFCIGRGGYGSVYKAELPS--------GDTVAVKKLHSFTGE---------TTHQ-------KEFLSEIKALTGVR-HRN 748 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~---------~~~~-------~~~~~E~~~l~~l~-h~n 748 (964)
.+.|..|-...+|++..++ ++.|.+++.-..... ...+ ..+..|..+++.+. +.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3456678888999998764 367888876431110 0001 12335888877774 444
Q ss_pred eeeEEeeeecCceeEEEEEeccCCCHH--HH------------h---hhcC---CCCCC--HHHHHHHHHHHH-------
Q 037111 749 IVKFYGFCSHARHSFLVYEYLERGSLA--RI------------L---SSET---ATEMD--WSKRVNVIKGVA------- 799 (964)
Q Consensus 749 iv~l~~~~~~~~~~~lv~e~~~~gsL~--~~------------l---~~~~---~~~l~--~~~~~~i~~~i~------- 799 (964)
..++++++..+ +|+||++|-+|. ++ + +... ..... +..+.++..++.
T Consensus 137 ~Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 66778877542 899999975442 11 0 1110 11122 234444443321
Q ss_pred ---------------HHH----HHHhhC-CCCCeEeccCCCCCeEECCC------CceEEeccCccc
Q 037111 800 ---------------HAL----SYMHHE-CRPPIVHRDVSSKNVLLDFE------YEAHVSDFGTAK 840 (964)
Q Consensus 800 ---------------~~l----~~LH~~-~~~~iiH~dlkp~Nill~~~------~~~kl~Dfg~a~ 840 (964)
..+ +++... ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223221 23468999999999999887 789999998774
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.81 E-value=0.11 Score=57.61 Aligned_cols=140 Identities=8% Similarity=0.076 Sum_probs=82.2
Q ss_pred cceeecCCceeEEEEEeCC--------CCeEEEEEeccccCchhhHHHHHHHHHHHhCCC-CCceeeEEeeeecCceeEE
Q 037111 694 SFCIGRGGYGSVYKAELPS--------GDTVAVKKLHSFTGETTHQKEFLSEIKALTGVR-HRNIVKFYGFCSHARHSFL 764 (964)
Q Consensus 694 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 764 (964)
.+.+..|-...+|+....+ ++.|++|+........ ....+|..+++.+. +.-..++++.+. -+.
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~---idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~ 147 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF---YDSKVELDVFRYLSNINIAPNIIADFP----EGR 147 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC---CCHHHHHHHHHHHHHTTSSCCEEEEET----TEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh---cCHHHHHHHHHHHHhcCCCCCEEEEcC----CCE
Confidence 4567778888999998753 5789999864321111 12245777766663 333456665442 378
Q ss_pred EEEeccCCCHHH--------------Hh---hh--c---------CCCCCCHHHHHHHHHHH------------------
Q 037111 765 VYEYLERGSLAR--------------IL---SS--E---------TATEMDWSKRVNVIKGV------------------ 798 (964)
Q Consensus 765 v~e~~~~gsL~~--------------~l---~~--~---------~~~~l~~~~~~~i~~~i------------------ 798 (964)
||||++|.++.. .+ +. . ...+.-+.++.++..++
T Consensus 148 I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 227 (424)
T 3mes_A 148 IEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSK 227 (424)
T ss_dssp EEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHH
T ss_pred EEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHH
Confidence 999999865321 01 11 0 11111244444443322
Q ss_pred -HHHHHHHhh---------------------CCCCCeEeccCCCCCeEECCCCceEEeccCcccc
Q 037111 799 -AHALSYMHH---------------------ECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKL 841 (964)
Q Consensus 799 -~~~l~~LH~---------------------~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~ 841 (964)
...+++|.. .....++|+|+.+.||+ +.++.+.++||..|..
T Consensus 228 l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 228 ILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 122333321 11346899999999999 7888999999998753
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.50 E-value=0.94 Score=49.98 Aligned_cols=30 Identities=23% Similarity=0.328 Sum_probs=24.9
Q ss_pred CeEeccCCCCCeEE------CCCCceEEeccCcccc
Q 037111 812 PIVHRDVSSKNVLL------DFEYEAHVSDFGTAKL 841 (964)
Q Consensus 812 ~iiH~dlkp~Nill------~~~~~~kl~Dfg~a~~ 841 (964)
.++|+|+.+.||++ +++..+.++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567799999998753
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=83.69 E-value=2.7 Score=41.13 Aligned_cols=124 Identities=6% Similarity=0.053 Sum_probs=83.1
Q ss_pred HHHHHhCCCCCceeeEEeeeecCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEec
Q 037111 737 EIKALTGVRHRNIVKFYGFCSHARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGVAHALSYMHHECRPPIVHR 816 (964)
Q Consensus 737 E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iiH~ 816 (964)
|+..+.. .||+.++. .+-.+++.+.+.++.-+ +..+|-. -...+...+++++.+|+...+++++. +|-
T Consensus 36 el~LL~~-~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~---ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf 103 (215)
T 4ann_A 36 LMYLLEQ-HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDN---IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTF 103 (215)
T ss_dssp GGGGGGS-CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGG---GGGSCHHHHHHHHHHGGGGGGGGGSS-----EEC
T ss_pred HHHHHhc-cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHH---HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEE
Confidence 4444443 68988877 45556666666555543 3333321 22367788999999999988666644 788
Q ss_pred cCCCCCeEECCCCceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCc
Q 037111 817 DVSSKNVLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDL 894 (964)
Q Consensus 817 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~ 894 (964)
-++|+|++++.++.+++.-.|+-..+.+ . ..+...=.-.+=+++..+++++..|+.
T Consensus 104 ~L~P~NL~f~~~~~p~i~~RGik~~l~P-----------------~-----~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 104 VLAPDELFFTRDGLPIAKTRGLQNVVDP-----------------L-----PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp CCSGGGEEECTTSCEEESCCEETTTBSC-----------------C-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred EEecceEEEcCCCCEEEEEccCccCCCC-----------------C-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 8999999999999999988776543322 1 122223344677888899999888764
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=82.09 E-value=0.17 Score=57.10 Aligned_cols=62 Identities=8% Similarity=-0.040 Sum_probs=17.4
Q ss_pred ccceeecCCceeEEEEEeCC-CCeEEE------EEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEeeee
Q 037111 693 ESFCIGRGGYGSVYKAELPS-GDTVAV------KKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGFCS 757 (964)
Q Consensus 693 ~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 757 (964)
..+.+| ||.||+|.+.. ..+||| |+.+......+....+.+|..+++..+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345566 99999998753 367888 776543334444567888999999999999999987754
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=74.88 E-value=8 Score=37.98 Aligned_cols=116 Identities=11% Similarity=0.066 Sum_probs=78.1
Q ss_pred CCCceeeEEeeeecCceeEEEEEeccCC-CHHHHhhhcCCCCCCHHHHHHHHHHHHHHHH-HHhhCCCCCeEeccCCCCC
Q 037111 745 RHRNIVKFYGFCSHARHSFLVYEYLERG-SLARILSSETATEMDWSKRVNVIKGVAHALS-YMHHECRPPIVHRDVSSKN 822 (964)
Q Consensus 745 ~h~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~-~LH~~~~~~iiH~dlkp~N 822 (964)
.||+. -..+-.+++...+.++.-+++ +.. .+ ..++...+++++.+|+.... +++. -+|--++|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i-----~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AI-----RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HH-----HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HH-----HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCce
Confidence 67888 344446677777777766444 333 33 22677888999999988776 5553 4788899999
Q ss_pred eEECCCCceEEeccCcccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCcc
Q 037111 823 VLLDFEYEAHVSDFGTAKLLKPDSSNWSELAGTYGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGQHPKDLL 895 (964)
Q Consensus 823 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwSlGvll~el~tg~~p~~~~ 895 (964)
+++|.++.+++.-.|+-..+ +|.. .+..-=.-.+=+++..++.++..|+..
T Consensus 115 L~f~~~~~p~i~hRGi~~~l-----------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe~l 165 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKESL-----------------PPDE-----WDDERLLREVKATVLALTEGEYRFDEY 165 (219)
T ss_dssp EEECTTCCEEESCCEETTTB-----------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHHH
T ss_pred EEEeCCCcEEEEEcCCcccC-----------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 99999999999888765433 2221 122222345677888888888877543
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=54.75 E-value=3.1 Score=28.93 Aligned_cols=8 Identities=25% Similarity=0.297 Sum_probs=3.1
Q ss_pred heeeeecc
Q 037111 645 MFVCSQRR 652 (964)
Q Consensus 645 ~~~~~~~~ 652 (964)
++++.|||
T Consensus 31 ~~~~~RRR 38 (44)
T 2jwa_A 31 FGILIKRR 38 (44)
T ss_dssp HHHHHHHH
T ss_pred HHhheehh
Confidence 33343433
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=42.97 E-value=52 Score=27.60 Aligned_cols=41 Identities=12% Similarity=0.031 Sum_probs=15.7
Q ss_pred ccCcccCCCCCCcEEEccCCeeccccCccccCCCccceEeec
Q 037111 362 NISDDFGIYPNLKLFDLSYNKFYGELSSNWWNCPQLGILKIA 403 (964)
Q Consensus 362 ~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~~~~L~~L~L~ 403 (964)
+....|..+.+|+.+.+-.+ ++.+...+|.+|.+|+.+.+.
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 33333433444444333321 222333344444444444443
No 453
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=42.38 E-value=13 Score=25.49 Aligned_cols=12 Identities=8% Similarity=0.274 Sum_probs=4.6
Q ss_pred hHHHHHHHHHHH
Q 037111 629 VLPLLAALALII 640 (964)
Q Consensus 629 ~~~~~~~~~~i~ 640 (964)
+..++..+++++
T Consensus 16 ~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 16 IGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHH
T ss_pred EeehhHHHHHHH
Confidence 333333333333
No 454
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=40.98 E-value=1.1e+02 Score=32.03 Aligned_cols=140 Identities=16% Similarity=0.177 Sum_probs=73.9
Q ss_pred ccccceeecCCceeEEEEEeCCCCeEEEEEeccccCchhhHHHHHHHHHHHhCCCCCceeeEEee-------------ee
Q 037111 691 FDESFCIGRGGYGSVYKAELPSGDTVAVKKLHSFTGETTHQKEFLSEIKALTGVRHRNIVKFYGF-------------CS 757 (964)
Q Consensus 691 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~-------------~~ 757 (964)
++.++..-.|..| ||.+.. ++..|+||-. .....+.+-.++...=.+.-|...-+.-. +.
T Consensus 71 v~~I~~s~~Gstg-vff~~t-d~~~~VVK~s-----~~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~ 143 (342)
T 1cja_A 71 FKGIERSEKGTEG-LFFVET-ESGVFIVKRS-----TNIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAID 143 (342)
T ss_dssp EEEEEECCSTTSC-EEEEEE-SSCEEEEECC-----TTHHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHC
T ss_pred eeEEEeccCCCCC-eEEEEe-CCCEEEEeCc-----HHHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhh
Confidence 4444555566554 555544 5778999943 12233445566666656666664322211 00
Q ss_pred ---------cCceeEEEEEeccCCCHHHHhhhcCCCCCCHHHHHHHHHHH--HHHHHHHhhCC-CCCeEe-ccCCCCCeE
Q 037111 758 ---------HARHSFLVYEYLERGSLARILSSETATEMDWSKRVNVIKGV--AHALSYMHHEC-RPPIVH-RDVSSKNVL 824 (964)
Q Consensus 758 ---------~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i--~~~l~~LH~~~-~~~iiH-~dlkp~Nil 824 (964)
......++|||++|..|.+.-...-...+..+ .+.++ +-++++...+. +.+.++ .--.+.|||
T Consensus 144 ~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL 219 (342)
T 1cja_A 144 KSFRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIM 219 (342)
T ss_dssp SSSCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEE
T ss_pred hhhHHHHHhhcccceehhhhcCCCccccchhhhhhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheE
Confidence 11245699999997665543211000012222 22332 33455555443 333332 124789999
Q ss_pred ECCCCc-eEEeccCcccc
Q 037111 825 LDFEYE-AHVSDFGTAKL 841 (964)
Q Consensus 825 l~~~~~-~kl~Dfg~a~~ 841 (964)
++.++. +.++|-+.+..
T Consensus 220 ~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 220 LSERGATVVPIDSKIIPL 237 (342)
T ss_dssp EESBTTCEEECSCCCCCC
T ss_pred EeCCCCeEEEEcCCcccc
Confidence 987654 88899988854
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=37.19 E-value=65 Score=26.99 Aligned_cols=44 Identities=14% Similarity=0.061 Sum_probs=29.4
Q ss_pred ccccccccCCCcCCeeecCCCccccccCcccCCCCCCcEEEccCC
Q 037111 337 GSLPKTLRNCTSLERVRLEKNQLIGNISDDFGIYPNLKLFDLSYN 381 (964)
Q Consensus 337 ~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 381 (964)
.+-..+|.+|++|+.+.|-.+ ++.+....|..+.+|+.+.+...
T Consensus 10 ~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 10 GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 344456777777777777654 56666777777777777777653
No 456
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=34.97 E-value=11 Score=26.31 Aligned_cols=10 Identities=20% Similarity=0.092 Sum_probs=5.1
Q ss_pred heeeeecccc
Q 037111 645 MFVCSQRRKK 654 (964)
Q Consensus 645 ~~~~~~~~k~ 654 (964)
++..+++++|
T Consensus 33 ~~RRRr~~~k 42 (44)
T 2l2t_A 33 YVRRKSIKKK 42 (44)
T ss_dssp HHHTTCSSCC
T ss_pred Hhhhhhhhhc
Confidence 3456655544
No 457
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=21.19 E-value=4.2e+02 Score=30.24 Aligned_cols=46 Identities=22% Similarity=0.166 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHH--HHHHHHhhCCCCCeEeccCCCCCeEECCCCceEEeccCccc
Q 037111 788 WSKRVNVIKGVA--HALSYMHHECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAK 840 (964)
Q Consensus 788 ~~~~~~i~~~i~--~~l~~LH~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~ 840 (964)
+..+..++...| ..+.|+=.- ||=+++|||++.+|++.=+|||.+-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 344444444433 355565433 5778999999999999999999874
No 458
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=20.90 E-value=9e+02 Score=26.94 Aligned_cols=152 Identities=16% Similarity=0.152 Sum_probs=99.6
Q ss_pred HHHHHHHhhcccccceeecCCceeEEEE-EeCCCCeEEEEEeccc--cCchhhHHHHHHHHHHHhCCCCCceeeEEeeee
Q 037111 681 YEEIIRSINNFDESFCIGRGGYGSVYKA-ELPSGDTVAVKKLHSF--TGETTHQKEFLSEIKALTGVRHRNIVKFYGFCS 757 (964)
Q Consensus 681 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 757 (964)
|.+...-...=+..-.+.-|--|.|-.+ +++ +-+++.|++++. ..++...+.+++.....++ |.-|-++-+..+
T Consensus 298 YR~~l~hl~~s~D~Fi~APGikGmVM~VFTLP-Sf~~VFKvIKD~F~p~K~~tr~~Vk~KY~LVK~--hDRVGRMADT~E 374 (578)
T 3eps_A 298 YREYLVYLQGCNEQFIEAPGIRGMVMLVFTLP-GFDRVFKVIKDKFAPQKEMSAAHVRACYQLVKE--HDRVGRMADTQE 374 (578)
T ss_dssp HHHHHHHHHTCCCCBEECSSCCCSSEEEEECT-TCSEEEEEECSSCCTTCCCCHHHHHHHHHHHHT--SCCTTTBCCCEE
T ss_pred HHHHHHHhccCchhEEECCCCCceEEEEEcCC-CCceEEEEEccCCCCccccCHHHHHHHHHHHHh--hhhhhhhhhhhh
Confidence 3444444444444556889999999999 555 778999999875 2344445566666666553 444444433221
Q ss_pred -----------------------------cCceeEEEEEeccC--CCHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHh
Q 037111 758 -----------------------------HARHSFLVYEYLER--GSLARILSSETATEMDWSKRVNVIKGVAHALSYMH 806 (964)
Q Consensus 758 -----------------------------~~~~~~lv~e~~~~--gsL~~~l~~~~~~~l~~~~~~~i~~~i~~~l~~LH 806 (964)
+++.+.+=.=|++. -.|.=|++.. +..++...+.+--.|+..|-
T Consensus 375 fsn~~fp~~Rfs~eLL~EL~~~~ps~le~~gd~liIkHlYiERRMtPLNLYL~~a-----~~~~~~~av~eYG~AIKqLA 449 (578)
T 3eps_A 375 FENFVLEKRHISPALMELLLQEAAEKITDLGEQIVIRHLYIERRMVPLNIWLEQV-----EGQQLRDAIEEYGNAIRQLA 449 (578)
T ss_dssp EEEEEEEGGGBCHHHHHHHHHHSGGGEEEETTEEEEEEEEEEECCEEHHHHHHHC-----CTHHHHHHHHHHHHHHHHHH
T ss_pred hhcccCchhhCCHHHHHHHHHhCCccEEEcCCeeEeeeeeeeccccchhHHHhhC-----CHHHHHHHHHHHHHHHHHHH
Confidence 12222221112221 2566666543 23567778888899999999
Q ss_pred hCCCCCeEeccCCCCCeEECCCCceEEeccCcccccC
Q 037111 807 HECRPPIVHRDVSSKNVLLDFEYEAHVSDFGTAKLLK 843 (964)
Q Consensus 807 ~~~~~~iiH~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 843 (964)
.. +|.-||.=-.|+=++..|+|..-|+.--+.+.
T Consensus 450 aA---NIFPGDML~KNFGVTRhgRVVFYDYDEI~ylT 483 (578)
T 3eps_A 450 AA---NIFPGDMLFKNFGVTRHGRVVFYDYDEICYMT 483 (578)
T ss_dssp HT---TEECSCCCGGGEEECTTCCEEECCGGGCEEST
T ss_pred Hh---cCCCcccccccCCccccceEEEecccceeeec
Confidence 99 99999999999999999999999997554443
Done!