Query 037115
Match_columns 572
No_of_seqs 140 out of 268
Neff 3.3
Searched_HMMs 29240
Date Mon Mar 25 14:47:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037115.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037115hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wvi_A Mitotic checkpoint seri 100.0 7.5E-54 2.6E-58 399.2 19.7 152 13-164 4-155 (164)
2 4a1g_A Mitotic checkpoint seri 100.0 6.9E-53 2.4E-57 388.9 16.6 149 5-155 3-151 (152)
3 4aez_C MAD3, mitotic spindle c 100.0 2.5E-51 8.5E-56 398.3 19.0 151 6-156 49-201 (223)
4 3esl_A Checkpoint serine/threo 100.0 3E-51 1E-55 392.9 12.8 155 4-158 4-168 (202)
5 4h7y_A Dual specificity protei 99.3 4.7E-11 1.6E-15 111.7 12.9 119 29-150 14-139 (161)
6 2ond_A Cleavage stimulation fa 97.9 5.7E-05 2E-09 71.0 10.7 117 28-155 8-149 (308)
7 4e6h_A MRNA 3'-END-processing 97.8 9.3E-05 3.2E-09 81.1 11.3 115 28-154 302-448 (679)
8 2ooe_A Cleavage stimulation fa 97.1 0.0036 1.2E-07 63.1 12.7 117 28-155 230-371 (530)
9 2ooe_A Cleavage stimulation fa 97.1 0.003 1E-07 63.6 11.9 130 7-152 27-177 (530)
10 4e6h_A MRNA 3'-END-processing 96.8 0.004 1.4E-07 68.3 10.0 106 14-134 331-463 (679)
11 2uy1_A Cleavage stimulation fa 96.5 0.0053 1.8E-07 63.8 7.9 69 76-149 173-255 (493)
12 2uy1_A Cleavage stimulation fa 96.4 0.034 1.2E-06 57.8 13.3 102 13-131 200-312 (493)
13 2ond_A Cleavage stimulation fa 96.3 0.0051 1.8E-07 57.7 6.1 115 9-135 33-164 (308)
14 3rkv_A Putative peptidylprolyl 87.0 4.1 0.00014 33.9 9.4 82 71-154 59-146 (162)
15 3ieg_A DNAJ homolog subfamily 86.6 6 0.0002 35.5 10.9 77 52-135 254-336 (359)
16 3u3w_A Transcriptional activat 86.5 6 0.00021 36.5 11.1 83 52-134 135-225 (293)
17 2ho1_A Type 4 fimbrial biogene 86.2 2.2 7.6E-05 37.1 7.7 52 86-137 122-173 (252)
18 2fbn_A 70 kDa peptidylprolyl i 86.0 9.8 0.00034 32.7 11.6 84 52-137 58-154 (198)
19 4h7y_A Dual specificity protei 85.4 1.8 6.2E-05 40.8 7.0 76 76-153 14-107 (161)
20 3sz7_A HSC70 cochaperone (SGT) 84.7 11 0.00036 31.4 10.9 92 52-154 31-129 (164)
21 3edt_B KLC 2, kinesin light ch 84.2 7.7 0.00026 33.5 10.1 82 52-134 105-198 (283)
22 4i17_A Hypothetical protein; T 83.7 1.8 6.2E-05 37.7 5.9 115 7-135 22-147 (228)
23 2fo7_A Synthetic consensus TPR 83.0 13 0.00044 27.9 9.8 45 88-134 88-132 (136)
24 1elr_A TPR2A-domain of HOP; HO 82.9 12 0.00043 28.2 9.8 44 105-150 79-122 (131)
25 3qky_A Outer membrane assembly 82.3 3.6 0.00012 36.9 7.4 123 7-137 30-180 (261)
26 3edt_B KLC 2, kinesin light ch 82.3 5 0.00017 34.7 8.1 83 51-134 20-114 (283)
27 3as5_A MAMA; tetratricopeptide 81.7 4.5 0.00016 32.5 7.2 75 52-137 62-142 (186)
28 2pl2_A Hypothetical conserved 81.7 3.3 0.00011 36.8 6.9 62 71-135 114-181 (217)
29 1na0_A Designed protein CTPR3; 81.1 13 0.00043 27.8 9.1 74 52-136 29-108 (125)
30 2xev_A YBGF; tetratricopeptide 80.7 10 0.00036 29.4 8.8 51 86-136 56-107 (129)
31 2vq2_A PILW, putative fimbrial 80.3 15 0.00051 30.7 10.1 51 87-137 95-145 (225)
32 1elw_A TPR1-domain of HOP; HOP 79.5 14 0.00047 27.4 8.8 75 52-137 24-104 (118)
33 3uq3_A Heat shock protein STI1 79.0 9.2 0.00032 32.7 8.6 122 7-137 20-171 (258)
34 2lni_A Stress-induced-phosphop 78.9 18 0.00062 27.6 9.6 73 52-135 36-114 (133)
35 3nf1_A KLC 1, kinesin light ch 78.5 4.3 0.00015 35.9 6.6 33 101-133 191-223 (311)
36 3ma5_A Tetratricopeptide repea 78.1 2.3 7.8E-05 33.5 4.2 62 71-134 3-70 (100)
37 3d5l_A Regulatory protein RECX 78.0 7.2 0.00025 37.2 8.4 96 53-152 93-191 (221)
38 3c1d_A Protein ORAA, regulator 77.9 13 0.00044 33.5 9.6 52 53-105 47-99 (159)
39 4g1t_A Interferon-induced prot 77.7 6.8 0.00023 37.7 8.1 127 5-135 28-168 (472)
40 3uq3_A Heat shock protein STI1 76.7 19 0.00065 30.7 9.9 66 70-137 134-205 (258)
41 3fp2_A TPR repeat-containing p 76.4 26 0.00087 34.0 11.8 90 52-143 398-500 (537)
42 2dba_A Smooth muscle cell asso 75.6 5.6 0.00019 31.3 5.9 77 52-136 48-130 (148)
43 3k9i_A BH0479 protein; putativ 75.4 5.6 0.00019 31.6 5.8 79 52-138 10-94 (117)
44 2kat_A Uncharacterized protein 75.2 22 0.00075 27.6 9.2 48 86-135 36-83 (115)
45 3u3w_A Transcriptional activat 75.0 25 0.00085 32.3 10.9 80 52-133 175-265 (293)
46 2ho1_A Type 4 fimbrial biogene 74.5 18 0.0006 31.4 9.3 67 70-138 136-208 (252)
47 2vq2_A PILW, putative fimbrial 72.3 14 0.00049 30.8 7.9 48 87-136 131-178 (225)
48 3nf1_A KLC 1, kinesin light ch 72.2 7.4 0.00025 34.4 6.4 82 52-134 89-182 (311)
49 3e3v_A Regulatory protein RECX 71.7 13 0.00044 34.4 8.1 96 53-152 50-148 (177)
50 3q49_B STIP1 homology and U bo 71.2 18 0.00063 28.3 7.9 73 52-135 29-107 (137)
51 3ulq_A Response regulator aspa 70.7 22 0.00075 33.7 9.6 78 52-133 284-367 (383)
52 3gw4_A Uncharacterized protein 70.5 26 0.00088 29.1 9.1 31 103-133 105-135 (203)
53 3ro3_A PINS homolog, G-protein 70.3 16 0.00056 28.3 7.3 80 52-134 69-158 (164)
54 4a1s_A PINS, partner of inscut 69.2 13 0.00046 34.8 7.7 29 105-133 303-331 (411)
55 3ro3_A PINS homolog, G-protein 69.2 16 0.00053 28.4 7.0 32 103-134 87-118 (164)
56 3q15_A PSP28, response regulat 68.7 16 0.00055 34.8 8.3 78 52-133 281-364 (378)
57 3upv_A Heat shock protein STI1 68.6 28 0.00097 27.3 8.5 47 87-135 56-102 (126)
58 2kck_A TPR repeat; tetratricop 68.6 16 0.00053 27.0 6.6 51 86-136 57-108 (112)
59 3dfg_A Xcrecx, regulatory prot 68.5 24 0.00083 32.0 9.1 53 53-106 49-102 (162)
60 1xnf_A Lipoprotein NLPI; TPR, 68.4 59 0.002 28.2 12.1 31 105-135 215-245 (275)
61 3hym_B Cell division cycle pro 67.2 47 0.0016 29.5 10.5 47 88-136 110-156 (330)
62 3hym_B Cell division cycle pro 67.0 58 0.002 28.9 11.1 25 111-135 165-189 (330)
63 2q7f_A YRRB protein; TPR, prot 66.9 42 0.0014 28.5 9.8 33 103-135 157-189 (243)
64 2y4t_A DNAJ homolog subfamily 66.4 27 0.00093 33.0 9.3 76 51-137 196-289 (450)
65 2cpt_A SKD1 protein, vacuolar 66.0 18 0.00063 31.8 7.5 56 103-158 16-81 (117)
66 2xpi_A Anaphase-promoting comp 66.0 39 0.0013 33.5 10.6 51 85-135 491-546 (597)
67 3gyz_A Chaperone protein IPGC; 65.6 19 0.00066 31.2 7.6 64 70-135 31-100 (151)
68 1a17_A Serine/threonine protei 65.5 50 0.0017 26.3 11.8 76 52-138 33-114 (166)
69 2ifu_A Gamma-SNAP; membrane fu 65.1 23 0.00079 33.1 8.5 29 104-133 115-143 (307)
70 3mkr_A Coatomer subunit epsilo 64.7 22 0.00076 33.4 8.4 66 73-140 167-235 (291)
71 2qfc_A PLCR protein; TPR, HTH, 64.6 39 0.0013 31.0 9.8 51 104-154 235-287 (293)
72 2gw1_A Mitochondrial precursor 64.6 79 0.0027 30.2 12.2 86 52-139 392-483 (514)
73 4gco_A Protein STI-1; structur 64.6 27 0.00092 28.6 7.9 47 87-135 65-111 (126)
74 1hh8_A P67PHOX, NCF-2, neutrop 64.2 29 0.00098 29.4 8.2 78 52-138 57-154 (213)
75 1xnf_A Lipoprotein NLPI; TPR, 64.0 72 0.0025 27.6 13.4 121 6-139 19-145 (275)
76 3vtx_A MAMA; tetratricopeptide 63.4 63 0.0022 26.7 12.5 37 99-135 101-137 (184)
77 2xcb_A PCRH, regulatory protei 63.4 15 0.00052 30.0 6.1 31 104-134 51-81 (142)
78 2xcb_A PCRH, regulatory protei 63.3 59 0.002 26.4 10.2 73 52-135 38-116 (142)
79 2w2u_A Hypothetical P60 katani 62.7 33 0.0011 28.4 8.0 54 103-156 17-79 (83)
80 3u4t_A TPR repeat-containing p 62.4 39 0.0013 29.5 8.9 50 86-137 91-140 (272)
81 2kc7_A BFR218_protein; tetratr 62.3 39 0.0013 25.2 7.9 51 87-139 18-69 (99)
82 2v6x_A Vacuolar protein sortin 61.9 30 0.001 28.1 7.6 56 103-158 11-75 (85)
83 4a5x_A MITD1, MIT domain-conta 61.7 23 0.00079 29.5 6.9 55 102-156 13-76 (86)
84 2qfc_A PLCR protein; TPR, HTH, 61.2 38 0.0013 31.1 9.0 29 106-134 197-225 (293)
85 1ihg_A Cyclophilin 40; ppiase 61.0 67 0.0023 31.7 11.4 84 52-137 243-339 (370)
86 2v6y_A AAA family ATPase, P60 60.8 33 0.0011 28.3 7.7 53 104-156 10-71 (83)
87 2y4t_A DNAJ homolog subfamily 60.3 58 0.002 30.7 10.3 76 52-135 277-359 (450)
88 2xpi_A Anaphase-promoting comp 60.2 45 0.0015 33.0 9.9 116 7-139 388-513 (597)
89 2r5s_A Uncharacterized protein 58.3 44 0.0015 28.2 8.3 49 88-138 93-141 (176)
90 3as5_A MAMA; tetratricopeptide 57.1 72 0.0025 25.4 11.4 72 52-134 96-173 (186)
91 2yhc_A BAMD, UPF0169 lipoprote 56.7 42 0.0014 29.6 8.2 34 104-137 146-179 (225)
92 1fch_A Peroxisomal targeting s 56.3 22 0.00076 32.5 6.5 48 87-134 199-246 (368)
93 2vgx_A Chaperone SYCD; alterna 56.1 23 0.00078 29.8 6.1 31 104-134 54-84 (148)
94 4eqf_A PEX5-related protein; a 55.8 43 0.0015 30.9 8.5 47 88-134 196-242 (365)
95 3mkr_A Coatomer subunit epsilo 55.7 24 0.00081 33.3 6.8 31 105-135 130-160 (291)
96 4abn_A Tetratricopeptide repea 54.0 30 0.001 34.9 7.7 114 6-133 78-207 (474)
97 3u4t_A TPR repeat-containing p 53.1 84 0.0029 27.3 9.5 52 85-136 53-105 (272)
98 2vyi_A SGTA protein; chaperone 52.8 69 0.0024 23.9 10.9 74 52-136 32-111 (131)
99 1wfd_A Hypothetical protein 15 52.3 77 0.0026 26.5 8.7 56 104-159 14-78 (93)
100 4ga2_A E3 SUMO-protein ligase 51.3 41 0.0014 28.1 6.9 47 88-136 50-96 (150)
101 4i17_A Hypothetical protein; T 50.5 75 0.0026 27.4 8.7 50 86-137 59-108 (228)
102 2q7f_A YRRB protein; TPR, prot 50.3 1.2E+02 0.0039 25.7 12.3 51 86-138 176-226 (243)
103 3vtx_A MAMA; tetratricopeptide 49.9 1.1E+02 0.0037 25.3 12.3 46 87-134 125-170 (184)
104 2kck_A TPR repeat; tetratricop 48.7 38 0.0013 24.8 5.7 49 87-137 24-72 (112)
105 2vgx_A Chaperone SYCD; alterna 48.2 1E+02 0.0035 25.7 9.0 73 52-135 41-119 (148)
106 3ro2_A PINS homolog, G-protein 48.0 47 0.0016 29.1 7.0 81 52-135 243-333 (338)
107 3k9i_A BH0479 protein; putativ 47.7 40 0.0014 26.5 6.0 53 86-138 7-60 (117)
108 3ro2_A PINS homolog, G-protein 46.8 47 0.0016 29.1 6.8 80 52-134 203-292 (338)
109 3sz7_A HSC70 cochaperone (SGT) 46.6 48 0.0016 27.4 6.6 49 87-137 29-77 (164)
110 1p5q_A FKBP52, FK506-binding p 46.6 2E+02 0.0069 27.4 13.2 84 52-137 167-262 (336)
111 3qky_A Outer membrane assembly 46.1 1.6E+02 0.0054 26.1 12.2 127 7-136 67-226 (261)
112 2v5f_A Prolyl 4-hydroxylase su 45.8 82 0.0028 25.1 7.7 36 100-135 41-76 (104)
113 1wao_1 Serine/threonine protei 44.9 38 0.0013 34.6 6.8 73 52-135 26-104 (477)
114 4eqf_A PEX5-related protein; a 44.9 1.9E+02 0.0064 26.6 11.9 114 7-135 192-311 (365)
115 2ff4_A Probable regulatory pro 44.5 1.2E+02 0.0041 30.5 10.3 112 10-150 133-255 (388)
116 2r5s_A Uncharacterized protein 44.3 15 0.00052 31.0 3.2 74 52-134 94-173 (176)
117 3gyz_A Chaperone protein IPGC; 44.1 1.1E+02 0.0036 26.5 8.7 84 52-148 56-145 (151)
118 3fp2_A TPR repeat-containing p 43.7 2E+02 0.0068 27.7 11.3 47 87-135 294-340 (537)
119 1hxi_A PEX5, peroxisome target 43.6 57 0.0019 26.4 6.5 72 52-134 37-114 (121)
120 2kat_A Uncharacterized protein 43.4 63 0.0022 24.9 6.5 37 102-138 16-52 (115)
121 2dl1_A Spartin; SPG20, MIT, st 43.1 42 0.0014 30.2 5.9 55 101-155 18-82 (116)
122 3q49_B STIP1 homology and U bo 42.6 68 0.0023 24.9 6.6 37 101-137 39-75 (137)
123 2vsy_A XCC0866; transferase, g 42.5 2.1E+02 0.0072 29.0 11.7 49 87-137 109-160 (568)
124 2e2e_A Formate-dependent nitri 42.0 1.5E+02 0.005 24.5 13.1 51 86-138 98-148 (177)
125 3urz_A Uncharacterized protein 41.8 1.1E+02 0.0038 26.6 8.5 50 86-137 71-120 (208)
126 1elw_A TPR1-domain of HOP; HOP 41.4 79 0.0027 23.2 6.5 36 102-137 35-70 (118)
127 3q15_A PSP28, response regulat 40.1 1.1E+02 0.0036 29.1 8.6 80 52-133 161-250 (378)
128 1elr_A TPR2A-domain of HOP; HO 40.1 82 0.0028 23.6 6.5 34 102-135 35-68 (131)
129 2c2l_A CHIP, carboxy terminus 40.1 1.3E+02 0.0045 27.8 9.1 45 88-134 57-101 (281)
130 1fch_A Peroxisomal targeting s 40.0 2.2E+02 0.0074 25.9 12.6 47 87-135 269-315 (368)
131 1kt0_A FKBP51, 51 kDa FK506-bi 39.5 2.8E+02 0.0097 27.8 12.1 82 52-135 288-381 (457)
132 4ga2_A E3 SUMO-protein ligase 38.8 36 0.0012 28.4 4.7 73 52-135 51-130 (150)
133 3sf4_A G-protein-signaling mod 38.7 82 0.0028 28.9 7.3 80 52-134 247-336 (406)
134 4a1s_A PINS, partner of inscut 37.6 77 0.0026 29.6 7.1 81 52-135 283-373 (411)
135 1hh8_A P67PHOX, NCF-2, neutrop 37.4 1.5E+02 0.0051 24.9 8.3 47 87-135 55-101 (213)
136 1na3_A Designed protein CTPR2; 37.2 1.1E+02 0.0038 21.8 9.1 47 88-136 28-74 (91)
137 3sf4_A G-protein-signaling mod 37.2 88 0.003 28.7 7.3 80 52-134 207-296 (406)
138 1na3_A Designed protein CTPR2; 36.1 1.2E+02 0.004 21.7 7.1 34 104-137 8-41 (91)
139 2gw1_A Mitochondrial precursor 36.0 1.1E+02 0.0036 29.3 7.9 47 86-134 321-367 (514)
140 2ifu_A Gamma-SNAP; membrane fu 35.6 1.2E+02 0.004 28.2 8.1 80 52-134 96-184 (307)
141 2dwk_A Protein RUFY3; RUN doma 35.4 9.7 0.00033 35.4 0.6 58 57-116 88-145 (180)
142 3ulq_A Response regulator aspa 34.7 67 0.0023 30.3 6.3 49 86-134 120-172 (383)
143 1a17_A Serine/threonine protei 34.2 1.7E+02 0.0059 23.1 11.2 71 52-131 67-143 (166)
144 4gcn_A Protein STI-1; structur 33.8 1.9E+02 0.0064 23.3 9.0 35 104-138 82-116 (127)
145 3upv_A Heat shock protein STI1 33.5 1.3E+02 0.0044 23.4 6.9 48 88-137 23-70 (126)
146 2pm7_A Protein WEB1, protein t 33.2 47 0.0016 34.6 5.3 102 27-130 225-361 (399)
147 3cv0_A Peroxisome targeting si 33.1 2.2E+02 0.0077 25.0 9.1 73 52-135 41-119 (327)
148 2vsy_A XCC0866; transferase, g 33.1 4E+02 0.014 26.9 12.8 76 52-138 43-124 (568)
149 3ma5_A Tetratricopeptide repea 32.4 58 0.002 25.2 4.6 34 104-137 6-39 (100)
150 2vyi_A SGTA protein; chaperone 32.4 1.5E+02 0.0052 21.9 8.9 48 88-137 31-78 (131)
151 2if4_A ATFKBP42; FKBP-like, al 31.9 1E+02 0.0034 29.7 7.1 47 87-135 248-294 (338)
152 3eab_A Spastin; spastin, MIT, 31.6 69 0.0024 27.6 5.2 55 101-155 12-76 (89)
153 2fo7_A Synthetic consensus TPR 31.5 1.6E+02 0.0053 21.8 10.0 50 87-138 53-102 (136)
154 3ieg_A DNAJ homolog subfamily 31.0 2.8E+02 0.0096 24.6 11.7 29 106-134 155-183 (359)
155 1hz4_A MALT regulatory protein 30.9 2.4E+02 0.0082 26.1 9.3 50 86-135 110-165 (373)
156 2l6j_A TPR repeat-containing p 30.3 62 0.0021 24.1 4.3 29 105-133 4-32 (111)
157 2e2e_A Formate-dependent nitri 29.8 2.3E+02 0.0079 23.2 9.0 75 52-137 30-113 (177)
158 2crb_A Nuclear receptor bindin 29.6 1.6E+02 0.0056 25.8 7.2 30 103-132 13-42 (97)
159 2yhc_A BAMD, UPF0169 lipoprote 29.4 1.2E+02 0.0041 26.6 6.6 50 86-135 58-126 (225)
160 4gcn_A Protein STI-1; structur 28.2 92 0.0031 25.2 5.3 34 101-134 38-71 (127)
161 1w3b_A UDP-N-acetylglucosamine 27.8 3.7E+02 0.013 24.9 11.9 115 8-133 253-367 (388)
162 3u64_A Protein TP_0956; tetrat 27.6 3E+02 0.01 28.1 9.9 134 13-150 138-287 (301)
163 2bn5_A PSI; nuclear protein, s 27.4 50 0.0017 24.0 3.0 22 109-130 6-27 (33)
164 1xi4_A Clathrin heavy chain; a 27.4 2.3E+02 0.0079 35.1 10.4 112 14-131 1091-1221(1630)
165 1wao_1 Serine/threonine protei 27.1 24 0.00083 36.1 1.9 109 6-129 20-134 (477)
166 3cax_A Uncharacterized protein 27.0 1.7E+02 0.0056 29.3 7.9 102 51-158 24-138 (369)
167 1hxi_A PEX5, peroxisome target 26.5 1.6E+02 0.0054 23.7 6.4 50 86-137 34-83 (121)
168 3gw4_A Uncharacterized protein 26.2 2.7E+02 0.0093 22.8 8.1 80 52-134 86-176 (203)
169 1qqe_A Vesicular transport pro 26.1 2.1E+02 0.0073 26.2 8.0 31 104-134 76-106 (292)
170 1yqf_A Hypothetical protein LM 25.5 59 0.002 30.7 4.2 30 90-119 161-190 (203)
171 3ly7_A Transcriptional activat 25.1 2.7E+02 0.0092 29.0 9.3 39 97-135 269-307 (372)
172 4gco_A Protein STI-1; structur 24.5 1.2E+02 0.0042 24.6 5.5 48 88-137 32-79 (126)
173 3qou_A Protein YBBN; thioredox 24.4 49 0.0017 30.7 3.3 64 71-134 215-284 (287)
174 3jv1_A P22 protein; MAM33 fami 24.3 61 0.0021 30.2 3.9 30 90-119 140-169 (182)
175 1p32_A Mitochondrial matrix pr 23.9 61 0.0021 30.7 3.9 30 90-119 165-194 (209)
176 1qqe_A Vesicular transport pro 23.9 3E+02 0.01 25.2 8.6 31 104-134 116-147 (292)
177 1jog_A Hypothetical protein HI 23.0 2.1E+02 0.0072 25.6 7.1 68 50-130 45-124 (146)
178 4giw_A RUN and SH3 domain-cont 22.3 65 0.0022 30.2 3.7 62 54-117 99-160 (198)
179 4b4t_Q 26S proteasome regulato 21.6 5E+02 0.017 24.3 10.0 82 50-134 113-204 (434)
180 4gyw_A UDP-N-acetylglucosamine 21.5 7.3E+02 0.025 27.2 12.3 113 7-136 24-142 (723)
181 3cv0_A Peroxisome targeting si 21.2 4.2E+02 0.014 23.2 13.9 75 52-137 192-272 (327)
182 2fbn_A 70 kDa peptidylprolyl i 20.1 1.2E+02 0.0042 25.7 4.7 31 104-134 37-67 (198)
No 1
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=100.00 E-value=7.5e-54 Score=399.24 Aligned_cols=152 Identities=26% Similarity=0.512 Sum_probs=144.6
Q ss_pred HHHHHHhhcCCCCCCcHHHHHHHHHHHhhCCCCcccCchHHHHHHHHHHhccccccccchHHHHHHHHHhcCcCCHHHHH
Q 037115 13 SSLIQDIKSYSGTDPLLPWLQGIKKMKDSLPSKLLKEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDFVDDPRVML 92 (572)
Q Consensus 13 ssLes~I~sYsGDDPLdpWlrYIkWiEEsyPsGg~ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~~dDP~dIF 92 (572)
+.||++|+.|+|||||++|++||+|++++||+|+.+++|..||||||++|+++++|+||+|||||||+||++|++|.+||
T Consensus 4 ~~fE~~i~~~~gdDPL~~w~~yIkW~e~~~p~~~~~s~L~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~~~p~~if 83 (164)
T 2wvi_A 4 RAFEYEIRFYTGNDPLDVWDRYISWTEQNYPQGGKESNMSTLLERAVEALQGEKRYYSDPRFLNLWLKLGRLCNEPLDMY 83 (164)
T ss_dssp HHHHHHCCCCCSSCTHHHHHHHHHHHHHHCCC----CCHHHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHHHCSCHHHHH
T ss_pred HHHHHHHhhcCCCCChHHHHHHHHHHHHHCcCCCccchHHHHHHHHHHHhhhhhhhccCHHHHHHHHHHHHhcCCHHHHH
Confidence 57899999999999999999999999999999988899999999999999999999999999999999999999999999
Q ss_pred HHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 037115 93 RTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEPADELQKSYEQFLHRMERHNKKRIQQQ 164 (572)
Q Consensus 93 ~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqPldrLk~ay~qFq~Rm~rr~~r~~q~e 164 (572)
+||+++|||+++|+||++||.+||..|+|++|++||++||+++|+|+++|+++|++|+.||+++++.+++..
T Consensus 84 ~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~P~~~L~~~~~~F~~R~~~~~~~~~~~~ 155 (164)
T 2wvi_A 84 SYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPLERLQSQHRQFQARVSRQTLLALEKE 155 (164)
T ss_dssp HHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999888654
No 2
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=100.00 E-value=6.9e-53 Score=388.88 Aligned_cols=149 Identities=27% Similarity=0.433 Sum_probs=141.0
Q ss_pred chhHhHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHhhCCCCcccCchHHHHHHHHHHhccccccccchHHHHHHHHHhcC
Q 037115 5 DAVYDTFFSSLIQDIKSYSGTDPLLPWLQGIKKMKDSLPSKLLKEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF 84 (572)
Q Consensus 5 ~~~~~~~fssLes~I~sYsGDDPLdpWlrYIkWiEEsyPsGg~ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~ 84 (572)
+...+.+++.||++|++|+|||||++|++||+|++++||+|+ ++|..||||||++|+++++|+||+|||||||+||++
T Consensus 3 ~~~~~~~~~~fE~~i~~y~gdDPL~~w~~YI~W~e~~~P~g~--~~l~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~ 80 (152)
T 4a1g_A 3 MDTPENVLQMLEAHMQSYKGNDPLGEWERYIQWVEENFPENK--EYLITLLEHLMKEFLDKKKYHNDPRFISYCLKFAEY 80 (152)
T ss_dssp -CHHHHHHHHHHHHTTSCCSSCHHHHHHHHHHHHHTTCSSCT--HHHHHHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTT
T ss_pred CchHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHcCCCc--hhHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHh
Confidence 345677777999999999999999999999999999999885 459999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHH
Q 037115 85 VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEPADELQKSYEQFLHRMER 155 (572)
Q Consensus 85 ~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqPldrLk~ay~qFq~Rm~r 155 (572)
|++|.+||+||+++|||+++|+||++||.+||.+|+|++|++||++||+++|+|+++|+++|++|++||+.
T Consensus 81 ~~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~~rL~~~~~~F~~R~~~ 151 (152)
T 4a1g_A 81 NSDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAEPREFLQQQYRLFQTRLTE 151 (152)
T ss_dssp BSCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHHHHHHHHHHHHHTC--
T ss_pred cCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999863
No 3
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.5e-51 Score=398.32 Aligned_cols=151 Identities=30% Similarity=0.576 Sum_probs=144.7
Q ss_pred hhHhHHHHHHHHHhhc-CCCCCCcHHHHHHHHHHHhhCCCCcc-cCchHHHHHHHHHHhccccccccchHHHHHHHHHhc
Q 037115 6 AVYDTFFSSLIQDIKS-YSGTDPLLPWLQGIKKMKDSLPSKLL-KEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMD 83 (572)
Q Consensus 6 ~~~~~~fssLes~I~s-YsGDDPLdpWlrYIkWiEEsyPsGg~-ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd 83 (572)
+.+....+.||.+|++ |.|||||++|++||+|++++||+|+. +++|..||||||++|+++++|+||+|||||||+||+
T Consensus 49 ~~l~~~r~~fE~~i~~~~~~dDPL~~w~~YIkW~ee~yP~g~~~~s~L~~lLErc~~~F~~~~rYknD~RyLklWl~Ya~ 128 (223)
T 4aez_C 49 AGLQKERMGHERKIETSESLDDPLQVWIDYIKWTLDNFPQGETKTSGLVTLLERCTREFVRNPLYKDDVRYLRIWMQYVN 128 (223)
T ss_dssp HHHHHHHHHHHHHHHHGGGSSCTHHHHHHHHHHHHHHCTTCCCTTTCHHHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHHhCcCCCcchhhHHHHHHHHHHHhcccccccCCHHHHHHHHHHHH
Confidence 5677788899999999 48999999999999999999999875 689999999999999999999999999999999999
Q ss_pred CcCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHH
Q 037115 84 FVDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEPADELQKSYEQFLHRMERH 156 (572)
Q Consensus 84 ~~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqPldrLk~ay~qFq~Rm~rr 156 (572)
+|++|.+||.||+++|||+++|+||++||.+||.+|+|++|++||++||+++|+|+++|+++|++|++||+.+
T Consensus 129 ~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~~rL~~~~~~F~~R~~~~ 201 (223)
T 4aez_C 129 YIDEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAKPFLRFQQKYQQFTHRWLEF 201 (223)
T ss_dssp TCSCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCBSHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999996654
No 4
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-51 Score=392.89 Aligned_cols=155 Identities=23% Similarity=0.355 Sum_probs=148.3
Q ss_pred cchhHhHHHHHHHHHhhc--CCCCCCcHHHHHHHHHHHhhCCCCcc--cCchH-HHHHHHHHHhccccccccchHHHHHH
Q 037115 4 SDAVYDTFFSSLIQDIKS--YSGTDPLLPWLQGIKKMKDSLPSKLL--KEKLP-RFLQKCAQTFESDRRYRNDMRYLRIW 78 (572)
Q Consensus 4 ~~~~~~~~fssLes~I~s--YsGDDPLdpWlrYIkWiEEsyPsGg~--ks~L~-~LLERCtr~FkddERYKND~RYLKIW 78 (572)
+.+.++...+.||.+|.+ |+|||||++|++||+|++++||+|+. +++|. .||||||++|+++++|+||+||||||
T Consensus 4 ~~~~l~~~r~~fE~~l~~~l~~~dDPL~~w~~YIkW~ee~yP~g~~~~~s~L~~~lLErc~~~F~~~~rYkND~RYLklW 83 (202)
T 3esl_A 4 QHSQLNQTKIAYEQRLLNDLEDMDDPLDLFLDYMIWISTSYIEVDSESGQEVLRSTMERCLIYIQDMETYRNDPRFLKIW 83 (202)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCGGGTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccCCCchHHHHHHHHHHHHhCCCCCCcchhchHHHHHHHHHHHhcccccccCCHHHHHHH
Confidence 346677888999999999 99999999999999999999999887 78999 99999999999999999999999999
Q ss_pred HHHhcC--cC---CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHH
Q 037115 79 LHLMDF--VD---DPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEPADELQKSYEQFLHRM 153 (572)
Q Consensus 79 LkYAd~--~d---DP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqPldrLk~ay~qFq~Rm 153 (572)
|+||++ ++ +|.+||.||+++|||+++|+||++||.+||.+|+|++|++||++||+++|+|+++|+++|++|++||
T Consensus 84 l~Ya~~~~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~P~~rL~~~~~~F~~R~ 163 (202)
T 3esl_A 84 IWYINLFLSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCRPYNRLLRSLSNYEDRL 163 (202)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHH
Confidence 999999 77 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh
Q 037115 154 ERHNK 158 (572)
Q Consensus 154 ~rr~~ 158 (572)
.+++.
T Consensus 164 ~~~~~ 168 (202)
T 3esl_A 164 REMNI 168 (202)
T ss_dssp HHTTC
T ss_pred HhcCC
Confidence 99744
No 5
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=99.25 E-value=4.7e-11 Score=111.74 Aligned_cols=119 Identities=17% Similarity=0.250 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHhhC-CCCcc-cCchHHHHHHHHHHhccccccccchHHHHHHHHHhcC-----cCCHHHHHHHHHHCCcc
Q 037115 29 LPWLQGIKKMKDSL-PSKLL-KEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF-----VDDPRVMLRTMEVNHIG 101 (572)
Q Consensus 29 dpWlrYIkWiEEsy-PsGg~-ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~-----~dDP~dIF~fL~sngIG 101 (572)
+.|+.|+.-+|.+= |.... =..|..++||++....-.. ++.-.||+.|||+||.+ .++++++|+.+.+. +
T Consensus 14 d~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k-~~~wrrYI~LWIrYA~~~ei~D~d~aR~vy~~a~~~--h 90 (161)
T 4h7y_A 14 EDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDK-YGQNESFARIQVRFAELKAIQEPDDARDYFQMARAN--C 90 (161)
T ss_dssp HHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGG-GTTCHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHH--C
T ss_pred HHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccc-cccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH--h
Confidence 78999999999772 11110 0456678888988887775 99999999999999987 45688999999885 9
Q ss_pred hhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCcHHHHHHHHHHHH
Q 037115 102 TKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEPADELQKSYEQFL 150 (572)
Q Consensus 102 tklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqPldrLk~ay~qFq 150 (572)
.++|-+|+.||++--++|++.+|.+|+..||-.+|.|.+-|..+.+..+
T Consensus 91 KkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~le~a~~nl~ 139 (161)
T 4h7y_A 91 KKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEMLEIALRNLN 139 (161)
T ss_dssp TTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999998876654
No 6
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=97.90 E-value=5.7e-05 Score=70.96 Aligned_cols=117 Identities=18% Similarity=0.217 Sum_probs=81.2
Q ss_pred cHHHHHHHHHHHhhCCCCccc-----CchHHHHHHHHHHhccccccccchHHHHHHHHHhcCc----------C------
Q 037115 28 LLPWLQGIKKMKDSLPSKLLK-----EKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDFV----------D------ 86 (572)
Q Consensus 28 LdpWlrYIkWiEEsyPsGg~k-----s~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~~----------d------ 86 (572)
+..|.+||+|-+. .|.+... .....++++|+.. ++.+..+|+.|+.+. .
T Consensus 8 ~~~W~~yi~~E~~-~~~~~~~~~~~~~~a~~~~~~al~~---------~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~ 77 (308)
T 2ond_A 8 VDMWKKYIQWEKS-NPLRTEDQTLITKRVMFAYEQCLLV---------LGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAK 77 (308)
T ss_dssp HHHHHHHHHHHHT-CTTCCCCHHHHHHHHHHHHHHHHHH---------HTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHH
T ss_pred HHHHHHHHHHHHh-CcccCCchHHHHHHHHHHHHHHHHH---------cCCCHHHHHHHHHHHHHhchhhhhccchhhcc
Confidence 5789999999554 4543221 1223577777765 467789999999763 2
Q ss_pred ----CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHH
Q 037115 87 ----DPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEPADELQKSYEQFLHRMER 155 (572)
Q Consensus 87 ----DP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqPldrLk~ay~qFq~Rm~r 155 (572)
.+..+|.-.... +....+.+|..||.+++..|++++|.++|+++|+..-.-...+...|..|+.|..+
T Consensus 78 ~~~~~A~~~~~rAl~~-~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~ 149 (308)
T 2ond_A 78 LFSDEAANIYERAIST-LLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEG 149 (308)
T ss_dssp HHHHHHHHHHHHHHTT-TTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHHHH-hCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcC
Confidence 344555544431 45678889999999999999999999999999985422122366777777766543
No 7
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.77 E-value=9.3e-05 Score=81.05 Aligned_cols=115 Identities=17% Similarity=0.225 Sum_probs=84.5
Q ss_pred cHHHHHHHHHHHhhCCCCccc----CchHHHHHHHHHHhccccccccchHHHHHHHHHhcCc------CCHH-HHHHHHH
Q 037115 28 LLPWLQGIKKMKDSLPSKLLK----EKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDFV------DDPR-VMLRTME 96 (572)
Q Consensus 28 LdpWlrYIkWiEEsyPsGg~k----s~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~~------dDP~-dIF~fL~ 96 (572)
|..|.+||.|-++ .|.+... .-+..++|+|+..|.. |=.+|+.||.++ .+++ .||.--.
T Consensus 302 l~lW~~yi~fEk~-~~~~l~~~~~~~Rv~~~Ye~aL~~~p~---------~~~lW~~ya~~~~~~~~~~~a~r~il~rAi 371 (679)
T 4e6h_A 302 LLIWLEWIRWESD-NKLELSDDLHKARMTYVYMQAAQHVCF---------APEIWFNMANYQGEKNTDSTVITKYLKLGQ 371 (679)
T ss_dssp HHHHHHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHTTT---------CHHHHHHHHHHHHHHSCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCccccchhhHHHHHHHHHHHHHHcCC---------CHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 6899999999765 3433211 1234689999998765 679999999973 3564 7776654
Q ss_pred HCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC---------CCc------------HHHHHHHHHHHHHHHH
Q 037115 97 VNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNL---------AEP------------ADELQKSYEQFLHRME 154 (572)
Q Consensus 97 sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~---------AqP------------ldrLk~ay~qFq~Rm~ 154 (572)
. ..-....+|..||.++|..|++++|.+||...+..- ..| ...+.-.|..|++|..
T Consensus 372 ~--~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~ 448 (679)
T 4e6h_A 372 Q--CIPNSAVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQ 448 (679)
T ss_dssp H--HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H--hCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcC
Confidence 3 334567899999999999999999999999999752 124 3456677778887764
No 8
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=97.15 E-value=0.0036 Score=63.12 Aligned_cols=117 Identities=18% Similarity=0.258 Sum_probs=83.1
Q ss_pred cHHHHHHHHHHHhhCCCCccc-----CchHHHHHHHHHHhccccccccchHHHHHHHHHhcCcC----------------
Q 037115 28 LLPWLQGIKKMKDSLPSKLLK-----EKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDFVD---------------- 86 (572)
Q Consensus 28 LdpWlrYIkWiEEsyPsGg~k-----s~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~~d---------------- 86 (572)
+..|..||.|-..+ |.+... .....++++|+..+. .+..+|+.|+.+..
T Consensus 230 ~~~w~~~~~~e~~~-~~~~~~~~~~~~~a~~~y~~al~~~p---------~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~ 299 (530)
T 2ooe_A 230 VDMWKKYIQWEKSN-PLRTEDQTLITKRVMFAYEQCLLVLG---------HHPDIWYEAAQYLEQSSKLLAEKGDMNNAK 299 (530)
T ss_dssp HHHHHHHHHHHHHC-SSCCSCSHHHHHHHHHHHHHHHHHHT---------TCHHHHHHHHHHHHHHHHHHHTTTCCHHHH
T ss_pred HHHHHHHHHHHHcC-CccCCcchhHHHHHHHHHHHHHHhCC---------CCHHHHHHHHHHHHHhchhhhhccchhhhh
Confidence 58999999997764 322111 133568999998753 34789999998742
Q ss_pred ----CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHH
Q 037115 87 ----DPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEPADELQKSYEQFLHRMER 155 (572)
Q Consensus 87 ----DP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqPldrLk~ay~qFq~Rm~r 155 (572)
.+..+|.--.. .+--..+.+|..||.+++..|++++|..+|+++++..-.-...+.-.|..|+.|..+
T Consensus 300 ~~~~~A~~~~~~Al~-~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~ 371 (530)
T 2ooe_A 300 LFSDEAANIYERAIS-TLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEG 371 (530)
T ss_dssp HHHHHHHHHHHHHTT-TTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHH-HhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcC
Confidence 23455554432 134567999999999999999999999999999996432123577778888877654
No 9
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=97.12 E-value=0.003 Score=63.64 Aligned_cols=130 Identities=10% Similarity=0.184 Sum_probs=90.6
Q ss_pred hHhHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHhhCCCCcccCchHHHHHHHHHHhccccccccchHHHHHHHHHhcCc-
Q 037115 7 VYDTFFSSLIQDIKSYSGTDPLLPWLQGIKKMKDSLPSKLLKEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDFV- 85 (572)
Q Consensus 7 ~~~~~fssLes~I~sYsGDDPLdpWlrYIkWiEEsyPsGg~ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~~- 85 (572)
..++....++..|..+ .+--..|+.|+.+.... +.-.....+++||+..+- + +.+|+.|+.+.
T Consensus 27 ~~~~a~~~~e~al~~~--P~~~~~w~~~~~~~~~~----~~~~~a~~~~~ral~~~p-------~---~~lw~~~~~~~~ 90 (530)
T 2ooe_A 27 PIDKARKTYERLVAQF--PSSGRFWKLYIEAEIKA----KNYDKVEKLFQRCLMKVL-------H---IDLWKCYLSYVR 90 (530)
T ss_dssp CHHHHHHHHHHHHTTC--TTCHHHHHHHHHHHHHT----TCHHHHHHHHHHHTTTCC-------C---HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHhc----CCHHHHHHHHHHHHhcCC-------C---hHHHHHHHHHHH
Confidence 3556666777777776 33357899999998753 223445788999887631 1 45899999642
Q ss_pred ------CCHHH----HHHHHHHC-CcchhhHHHHHHHHHHHHH---------ccCHHHHHHHHHHHHHCCCCcHHHHHHH
Q 037115 86 ------DDPRV----MLRTMEVN-HIGTKRSLFYQANALYYEK---------MKKFEEAEKMYHLGVQNLAEPADELQKS 145 (572)
Q Consensus 86 ------dDP~d----IF~fL~sn-gIGtklALFYEaWA~~LE~---------~g~fkeAdeIYqlGIqr~AqPldrLk~a 145 (572)
..+++ +|...... |+-.....+|..|+.++.. .|++++|..+|+++|+.--.+...+...
T Consensus 91 ~~~~~~~~a~~~~~~~~~~al~~~g~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~a~~~y~~al~~P~~~~~~~~~~ 170 (530)
T 2ooe_A 91 ETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRD 170 (530)
T ss_dssp HHTTTSTTHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHSCCCSSTTHHHHHHHHHHHHHHHTTSCCTTHHHHHHH
T ss_pred HHccchhhHHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHhcCCCcccHHHHhHHHHHHHHHHHHHhchhhhHHHHHHH
Confidence 34555 66654432 3223568899999998876 7999999999999999534455677778
Q ss_pred HHHHHHH
Q 037115 146 YEQFLHR 152 (572)
Q Consensus 146 y~qFq~R 152 (572)
|..|...
T Consensus 171 ~~~~e~~ 177 (530)
T 2ooe_A 171 YNKYEEG 177 (530)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8888643
No 10
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.77 E-value=0.004 Score=68.25 Aligned_cols=106 Identities=8% Similarity=0.067 Sum_probs=76.1
Q ss_pred HHHHHhhcCCCCCCcHHHHHHHHHHHhhCCCCcccCchH-HHHHHHHHHhccccccccchHHHHHHHHHhcC------cC
Q 037115 14 SLIQDIKSYSGTDPLLPWLQGIKKMKDSLPSKLLKEKLP-RFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VD 86 (572)
Q Consensus 14 sLes~I~sYsGDDPLdpWlrYIkWiEEsyPsGg~ks~L~-~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~d 86 (572)
-++..|.... .+ =+.|+.|++|.+..- ...... .+|+|++..+-.+ ..||+.||++ .+
T Consensus 331 ~Ye~aL~~~p-~~-~~lW~~ya~~~~~~~----~~~~a~r~il~rAi~~~P~s---------~~Lwl~~a~~ee~~~~~e 395 (679)
T 4e6h_A 331 VYMQAAQHVC-FA-PEIWFNMANYQGEKN----TDSTVITKYLKLGQQCIPNS---------AVLAFSLSEQYELNTKIP 395 (679)
T ss_dssp HHHHHHHHTT-TC-HHHHHHHHHHHHHHS----CCTTHHHHHHHHHHHHCTTC---------HHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHcC-CC-HHHHHHHHHHHHhcC----cHHHHHHHHHHHHHHhCCCC---------HHHHHHHHHHHHHhCCHH
Confidence 3555555542 22 378999999998752 123344 8999999865432 5789999986 23
Q ss_pred CHHHHHHHHHHCC----------cch----------hhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC
Q 037115 87 DPRVMLRTMEVNH----------IGT----------KRSLFYQANALYYEKMKKFEEAEKMYHLGVQN 134 (572)
Q Consensus 87 DP~dIF~fL~sng----------IGt----------klALFYEaWA~~LE~~g~fkeAdeIYqlGIqr 134 (572)
.++.||.-+...- +.+ ..+..|+.||.+....|..+.|.+||.++++.
T Consensus 396 ~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~ 463 (679)
T 4e6h_A 396 EIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRL 463 (679)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4678888776531 221 46778999999999999999999999999987
No 11
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.46 E-value=0.0053 Score=63.81 Aligned_cols=69 Identities=14% Similarity=0.100 Sum_probs=50.7
Q ss_pred HHHHHHhcCc-CCH------------HHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCcHH-H
Q 037115 76 RIWLHLMDFV-DDP------------RVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEPAD-E 141 (572)
Q Consensus 76 KIWLkYAd~~-dDP------------~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqPld-r 141 (572)
++|..|+++. .+| ..+|...... +...+.+|..||.+++..|+.++|..||.+||.. |-. .
T Consensus 173 ~~W~~y~~~E~~~~~~~~~~~~~~Rv~~~ye~al~~--~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~---P~~~~ 247 (493)
T 2uy1_A 173 KNAARLIDLEMENGMKLGGRPHESRMHFIHNYILDS--FYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM---SDGMF 247 (493)
T ss_dssp HHHHHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHH--TTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CCSSH
T ss_pred HHHHHHHHHHhcCCccCcchhhHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC---CCcHH
Confidence 4899999974 332 2355554442 2345899999999999999999999999999998 544 3
Q ss_pred HHHHHHHH
Q 037115 142 LQKSYEQF 149 (572)
Q Consensus 142 Lk~ay~qF 149 (572)
|.-+|..|
T Consensus 248 l~~~y~~~ 255 (493)
T 2uy1_A 248 LSLYYGLV 255 (493)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 44455555
No 12
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.36 E-value=0.034 Score=57.81 Aligned_cols=102 Identities=11% Similarity=0.002 Sum_probs=62.3
Q ss_pred HHHHHHhhcCCCCCCcHHHHHHHHHHHhhCCCCcccCchHHHHHHHHHHhccccccccchHHHHHHHHHhcCcCCHHHHH
Q 037115 13 SSLIQDIKSYSGTDPLLPWLQGIKKMKDSLPSKLLKEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDFVDDPRVML 92 (572)
Q Consensus 13 ssLes~I~sYsGDDPLdpWlrYIkWiEEsyPsGg~ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~~dDP~dIF 92 (572)
.-++..|... ...-..|+.|++|..+. +.-.....+++|++.. ..+. -+|+.|+.+..- .++|
T Consensus 200 ~~ye~al~~~--p~~~~lW~~ya~~~~~~----~~~~~ar~i~erAi~~-P~~~---------~l~~~y~~~~e~-~~~~ 262 (493)
T 2uy1_A 200 FIHNYILDSF--YYAEEVYFFYSEYLIGI----GQKEKAKKVVERGIEM-SDGM---------FLSLYYGLVMDE-EAVY 262 (493)
T ss_dssp HHHHHHHHHT--TTCHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHH-CCSS---------HHHHHHHHHTTC-THHH
T ss_pred HHHHHHHHcC--CCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHhC-CCcH---------HHHHHHHhhcch-hHHH
Confidence 3445555544 22368999999999864 2223457899999988 4332 367777765321 1234
Q ss_pred HHHHHCC-----------cchhhHHHHHHHHHHHHHccCHHHHHHHHHHH
Q 037115 93 RTMEVNH-----------IGTKRSLFYQANALYYEKMKKFEEAEKMYHLG 131 (572)
Q Consensus 93 ~fL~sng-----------IGtklALFYEaWA~~LE~~g~fkeAdeIYqlG 131 (572)
.-++..- .+......|..|+.+++..+..+.|..||.++
T Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A 312 (493)
T 2uy1_A 263 GDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL 312 (493)
T ss_dssp HHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 4444321 23445567777777777777777777777777
No 13
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=96.30 E-value=0.0051 Score=57.70 Aligned_cols=115 Identities=6% Similarity=0.137 Sum_probs=81.2
Q ss_pred hHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHhhC----CCCcc------cCchHHHHHHHHHHhccccccccchHHHHHH
Q 037115 9 DTFFSSLIQDIKSYSGTDPLLPWLQGIKKMKDSL----PSKLL------KEKLPRFLQKCAQTFESDRRYRNDMRYLRIW 78 (572)
Q Consensus 9 ~~~fssLes~I~sYsGDDPLdpWlrYIkWiEEsy----PsGg~------ks~L~~LLERCtr~FkddERYKND~RYLKIW 78 (572)
+++...|+..|... .+-.+.|+.|..|..+.. -.|.. -..-..+++|++..+ ++.+..+|
T Consensus 33 ~~a~~~~~~al~~~--p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~--------~p~~~~~~ 102 (308)
T 2ond_A 33 KRVMFAYEQCLLVL--GHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL--------LKKNMLLY 102 (308)
T ss_dssp HHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTT--------TTTCHHHH
T ss_pred HHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHh--------CcccHHHH
Confidence 45555666666654 344688999999987531 01111 023467788887743 45677899
Q ss_pred HHHhcCc------CCHHHHHHHHHHCCcchhhH-HHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 79 LHLMDFV------DDPRVMLRTMEVNHIGTKRS-LFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 79 LkYAd~~------dDP~dIF~fL~sngIGtklA-LFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
+.|+.+. +.+..+|.-.... ....+ ..|..|+.++...|++++|..+|+++++..
T Consensus 103 ~~~~~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~ 164 (308)
T 2ond_A 103 FAYADYEESRMKYEKVHSIYNRLLAI--EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDA 164 (308)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTS--SSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTST
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhc--cccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 9999863 4577888888764 33333 389999999999999999999999999864
No 14
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=86.97 E-value=4.1 Score=33.93 Aligned_cols=82 Identities=12% Similarity=0.083 Sum_probs=54.8
Q ss_pred chHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCcHHHHHH
Q 037115 71 DMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEPADELQK 144 (572)
Q Consensus 71 D~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqPldrLk~ 144 (572)
++....+|...+.. ...+...|..... +....+..|-..|..+...|+|++|...|+.++.-...-...+..
T Consensus 59 ~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~--~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~ 136 (162)
T 3rkv_A 59 DRKNIPLYANMSQCYLNIGDLHEAEETSSEVLK--REETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAR 136 (162)
T ss_dssp HHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH--HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh--cCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 56666777766653 2344455555544 456667778888999999999999999999999986443334555
Q ss_pred HHHHHHHHHH
Q 037115 145 SYEQFLHRME 154 (572)
Q Consensus 145 ay~qFq~Rm~ 154 (572)
.......++.
T Consensus 137 ~l~~~~~~~~ 146 (162)
T 3rkv_A 137 EMKIVTERRA 146 (162)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5544444433
No 15
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=86.59 E-value=6 Score=35.53 Aligned_cols=77 Identities=12% Similarity=0.009 Sum_probs=52.7
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
..++++++....++..+ +..+|..++.. ...+..+|.-.... ....+..|...|..+...|++++|.
T Consensus 254 ~~~~~~~~~~~~~~~~~-----~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~A~ 326 (359)
T 3ieg_A 254 TSKYESVMKTEPSVAEY-----TVRSKERICHCFSKDEKPVEAIRICSEVLQM--EPDNVNALKDRAEAYLIEEMYDEAI 326 (359)
T ss_dssp HHHHHHHHHHCCSSHHH-----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHhcCCCchHH-----HHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CcccHHHHHHHHHHHHHcCCHHHHH
Confidence 45666666665443222 22333333332 34566777776654 4566788999999999999999999
Q ss_pred HHHHHHHHCC
Q 037115 126 KMYHLGVQNL 135 (572)
Q Consensus 126 eIYqlGIqr~ 135 (572)
..|+.+++..
T Consensus 327 ~~~~~a~~~~ 336 (359)
T 3ieg_A 327 QDYEAAQEHN 336 (359)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHhcC
Confidence 9999999875
No 16
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=86.46 E-value=6 Score=36.45 Aligned_cols=83 Identities=7% Similarity=-0.138 Sum_probs=51.4
Q ss_pred HHHHHHHHHHhccccccccchH-HHHHHHHHhcC--cCCHHHHHHHHHH----C-CcchhhHHHHHHHHHHHHHccCHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMR-YLRIWLHLMDF--VDDPRVMLRTMEV----N-HIGTKRSLFYQANALYYEKMKKFEE 123 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~R-YLKIWLkYAd~--~dDP~dIF~fL~s----n-gIGtklALFYEaWA~~LE~~g~fke 123 (572)
...+++++.............. |..+-.-|... .+.+...|..... . +.-...+..|-..|.++...|+|++
T Consensus 135 i~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~ 214 (293)
T 3u3w_A 135 ILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEE 214 (293)
T ss_dssp HHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHH
Confidence 5677777774433222111111 33333344443 2345566665552 2 3445667788899999999999999
Q ss_pred HHHHHHHHHHC
Q 037115 124 AEKMYHLGVQN 134 (572)
Q Consensus 124 AdeIYqlGIqr 134 (572)
|...|+.+|.-
T Consensus 215 A~~~~~~al~~ 225 (293)
T 3u3w_A 215 SLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999974
No 17
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=86.21 E-value=2.2 Score=37.13 Aligned_cols=52 Identities=15% Similarity=0.165 Sum_probs=38.5
Q ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 86 DDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 86 dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
+++..+|.-+...+.....+..|...|..+...|++++|..+|+..+.....
T Consensus 122 ~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~ 173 (252)
T 2ho1_A 122 EEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN 173 (252)
T ss_dssp HHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc
Confidence 3455666666664455667778888888888889999999999888886533
No 18
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=86.00 E-value=9.8 Score=32.68 Aligned_cols=84 Identities=8% Similarity=-0.072 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhccccccccc-------hHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHc
Q 037115 52 PRFLQKCAQTFESDRRYRND-------MRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKM 118 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND-------~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~ 118 (572)
..++++++..+..+..|... .-...+|..++.. ..++...|..... +....+..|...|..+...
T Consensus 58 ~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~lg~~~~~~ 135 (198)
T 2fbn_A 58 IVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLK--IDKNNVKALYKLGVANMYF 135 (198)
T ss_dssp HHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH--hCcccHHHHHHHHHHHHHc
Confidence 56777777766665544332 0012444444432 2345555555544 4556777888899999999
Q ss_pred cCHHHHHHHHHHHHHCCCC
Q 037115 119 KKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 119 g~fkeAdeIYqlGIqr~Aq 137 (572)
|+|++|...|+.++.....
T Consensus 136 ~~~~~A~~~~~~al~~~p~ 154 (198)
T 2fbn_A 136 GFLEEAKENLYKAASLNPN 154 (198)
T ss_dssp TCHHHHHHHHHHHHHHSTT
T ss_pred ccHHHHHHHHHHHHHHCCC
Confidence 9999999999999987543
No 19
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=85.40 E-value=1.8 Score=40.84 Aligned_cols=76 Identities=13% Similarity=0.056 Sum_probs=57.6
Q ss_pred HHHHHHhcCc---CCH---------HHHHHHHHH------CCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 76 RIWLHLMDFV---DDP---------RVMLRTMEV------NHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 76 KIWLkYAd~~---dDP---------~dIF~fL~s------ngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
..|+.|++.. .+| +++|+--.+ .+--...+-+|+.||.+.|. ++.++|.+||+..++.+ +
T Consensus 14 d~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~~ei-~D~d~aR~vy~~a~~~h-K 91 (161)
T 4h7y_A 14 EDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELKAI-QEPDDARDYFQMARANC-K 91 (161)
T ss_dssp HHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHHHHH-HCGGGCHHHHHHHHHHC-T
T ss_pred HHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHh-H
Confidence 4677777753 455 256654332 45566788999999988555 99999999999998874 4
Q ss_pred cHHHHHHHHHHHHHHH
Q 037115 138 PADELQKSYEQFLHRM 153 (572)
Q Consensus 138 PldrLk~ay~qFq~Rm 153 (572)
-...+.-.|.+|+.|-
T Consensus 92 kFAKiwi~~AqFEiRq 107 (161)
T 4h7y_A 92 KFAFVHISFAQFELSQ 107 (161)
T ss_dssp TBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 4699999999999883
No 20
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=84.72 E-value=11 Score=31.43 Aligned_cols=92 Identities=12% Similarity=0.108 Sum_probs=58.4
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
..++++++....+ ...+|..++.. ...+...|..... +....+..|...|..+...|+|++|.
T Consensus 31 ~~~~~~al~~~p~---------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~--~~p~~~~~~~~lg~~~~~~g~~~~A~ 99 (164)
T 3sz7_A 31 IDLYTQALSIAPA---------NPIYLSNRAAAYSASGQHEKAAEDAELATV--VDPKYSKAWSRLGLARFDMADYKGAK 99 (164)
T ss_dssp HHHHHHHHHHSTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHhCCc---------CHHHHHHHHHHHHHccCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHccCHHHHH
Confidence 5666776665433 23344444432 2345556665554 45667888889999999999999999
Q ss_pred HHHHHHHHCCC-CcHHHHHHHHHHHHHHHH
Q 037115 126 KMYHLGVQNLA-EPADELQKSYEQFLHRME 154 (572)
Q Consensus 126 eIYqlGIqr~A-qPldrLk~ay~qFq~Rm~ 154 (572)
..|+.++...- .+...+...+.....++.
T Consensus 100 ~~~~~al~~~p~~~~~~~~~~l~~~~~~~~ 129 (164)
T 3sz7_A 100 EAYEKGIEAEGNGGSDAMKRGLETTKRKIE 129 (164)
T ss_dssp HHHHHHHHHHSSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHHHHHH
Confidence 99999998643 233344555544444433
No 21
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=84.21 E-value=7.7 Score=33.48 Aligned_cols=82 Identities=12% Similarity=0.025 Sum_probs=53.8
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcCc------CCHHHHHHHHHHC------CcchhhHHHHHHHHHHHHHcc
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDFV------DDPRVMLRTMEVN------HIGTKRSLFYQANALYYEKMK 119 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~~------dDP~dIF~fL~sn------gIGtklALFYEaWA~~LE~~g 119 (572)
..++++++..+.... -.+++....+|...+... +.+..+|.-.... .-....+..|...|.++...|
T Consensus 105 ~~~~~~al~~~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g 183 (283)
T 3edt_B 105 EPLCKRALEIREKVL-GKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQG 183 (283)
T ss_dssp HHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHc-CCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcC
Confidence 566677766654321 123466677777766642 2355566555543 114556778888899999999
Q ss_pred CHHHHHHHHHHHHHC
Q 037115 120 KFEEAEKMYHLGVQN 134 (572)
Q Consensus 120 ~fkeAdeIYqlGIqr 134 (572)
++++|...|+.++..
T Consensus 184 ~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 184 KYQDAETLYKEILTR 198 (283)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999888863
No 22
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=83.66 E-value=1.8 Score=37.70 Aligned_cols=115 Identities=11% Similarity=0.152 Sum_probs=66.4
Q ss_pred hHhHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHhhCCCCcccCchHHHHHHHHHHhccccccccchHHHHHHHHHhcC--
Q 037115 7 VYDTFFSSLIQDIKSYSGTDPLLPWLQGIKKMKDSLPSKLLKEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF-- 84 (572)
Q Consensus 7 ~~~~~fssLes~I~sYsGDDPLdpWlrYIkWiEEsyPsGg~ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~-- 84 (572)
.+++....|...|......|+ ..|.. +-++.... | .-..-...+++++.. ++.+..+|..++..
T Consensus 22 ~~~~A~~~~~~al~~~~~~~~-~~~~~-~~~~~~~~--~-~~~~A~~~~~~al~~---------~p~~~~~~~~l~~~~~ 87 (228)
T 4i17_A 22 NYAVAFEKYSEYLKLTNNQDS-VTAYN-CGVCADNI--K-KYKEAADYFDIAIKK---------NYNLANAYIGKSAAYR 87 (228)
T ss_dssp CHHHHHHHHHHHHHHTTTCCH-HHHHH-HHHHHHHT--T-CHHHHHHHHHHHHHT---------TCSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhccCCCCc-HHHHH-HHHHHHHh--h-cHHHHHHHHHHHHHh---------CcchHHHHHHHHHHHH
Confidence 345566666667766532333 22222 22222111 1 111124455555532 34456666666653
Q ss_pred ----cCCHHHHHHHHHHCCcchh-----hHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 85 ----VDDPRVMLRTMEVNHIGTK-----RSLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 85 ----~dDP~dIF~fL~sngIGtk-----lALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
...+...|+......-... ++..|...+.++...|+|++|...|+..|+..
T Consensus 88 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 147 (228)
T 4i17_A 88 DMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVT 147 (228)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSS
T ss_pred HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcC
Confidence 2345666766655433322 44678889999999999999999999999874
No 23
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=83.03 E-value=13 Score=27.92 Aligned_cols=45 Identities=11% Similarity=0.067 Sum_probs=25.0
Q ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC
Q 037115 88 PRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQN 134 (572)
Q Consensus 88 P~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr 134 (572)
+..+|..+... .......|...|..+...|++++|...|+..+..
T Consensus 88 A~~~~~~~~~~--~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 88 AIEYYQKALEL--DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp HHHHHHHHHHH--CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh--CCCChHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 33444444432 2333445556666666667777777766666653
No 24
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=82.95 E-value=12 Score=28.24 Aligned_cols=44 Identities=18% Similarity=0.217 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCcHHHHHHHHHHHH
Q 037115 105 SLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEPADELQKSYEQFL 150 (572)
Q Consensus 105 ALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqPldrLk~ay~qFq 150 (572)
+..|...|..+...|++++|...|+.++...-. ...........
T Consensus 79 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~l~~~~ 122 (131)
T 1elr_A 79 AKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRT--PDVLKKCQQAE 122 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC--HHHHHHHHHHH
Confidence 677888999999999999999999999997533 33444444333
No 25
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=82.27 E-value=3.6 Score=36.88 Aligned_cols=123 Identities=11% Similarity=0.005 Sum_probs=67.5
Q ss_pred hHhHHHHHHHHHhhcCCCCCCcH--HHHH--HHHHHHhhCCCCcccCchHHHHHHHHHHhccccccccchHHHHHHHHHh
Q 037115 7 VYDTFFSSLIQDIKSYSGTDPLL--PWLQ--GIKKMKDSLPSKLLKEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLM 82 (572)
Q Consensus 7 ~~~~~fssLes~I~sYsGDDPLd--pWlr--YIkWiEEsyPsGg~ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYA 82 (572)
.++++...|...|..+. ++|+. .|+. .+.+-...| ..-...+++++..+.+++. ..+..|..-.+.+.
T Consensus 30 ~~~~A~~~~~~~l~~~p-~~~~~~~a~~~lg~~~~~~~~~------~~A~~~~~~~l~~~p~~~~-~~~a~~~lg~~~~~ 101 (261)
T 3qky_A 30 KYDRAIEYFKAVFTYGR-THEWAADAQFYLARAYYQNKEY------LLAASEYERFIQIYQIDPR-VPQAEYERAMCYYK 101 (261)
T ss_dssp CHHHHHHHHHHHGGGCS-CSTTHHHHHHHHHHHHHHTTCH------HHHHHHHHHHHHHCTTCTT-HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHhCcH------HHHHHHHHHHHHHCCCCch-hHHHHHHHHHHHHH
Confidence 45666677777777763 33332 2221 222222111 1225677777776654432 22333433333332
Q ss_pred ---------cCcCCHHHHHHHHHHCCcchhhHH---------------HHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 83 ---------DFVDDPRVMLRTMEVNHIGTKRSL---------------FYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 83 ---------d~~dDP~dIF~fL~sngIGtklAL---------------FYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
...+.+...|.-+....=....+. -|...|.++...|+|++|...|+..|.....
T Consensus 102 ~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~ 180 (261)
T 3qky_A 102 LSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPD 180 (261)
T ss_dssp HCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC
Confidence 223456666666655433332222 1245688899999999999999999987544
No 26
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=82.26 E-value=5 Score=34.68 Aligned_cols=83 Identities=12% Similarity=0.083 Sum_probs=59.7
Q ss_pred hHHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHC------CcchhhHHHHHHHHHHHHHc
Q 037115 51 LPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVN------HIGTKRSLFYQANALYYEKM 118 (572)
Q Consensus 51 L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sn------gIGtklALFYEaWA~~LE~~ 118 (572)
=..++++++..+...-. .+++....+|...+.. .+.+...|...... +--...+..|...|.++...
T Consensus 20 A~~~~~~al~~~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 98 (283)
T 3edt_B 20 AVPLCKQALEDLEKTSG-HDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKR 98 (283)
T ss_dssp HHHHHHHHHHHHHHHHC-SSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHh
Confidence 36788888888765422 2346777777777764 23455666655443 22356677888999999999
Q ss_pred cCHHHHHHHHHHHHHC
Q 037115 119 KKFEEAEKMYHLGVQN 134 (572)
Q Consensus 119 g~fkeAdeIYqlGIqr 134 (572)
|++++|...|+.++..
T Consensus 99 g~~~~A~~~~~~al~~ 114 (283)
T 3edt_B 99 GKYKEAEPLCKRALEI 114 (283)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHH
Confidence 9999999999999976
No 27
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=81.72 E-value=4.5 Score=32.52 Aligned_cols=75 Identities=9% Similarity=0.051 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
..++++++.... ....+|+.++.. .+.+..+|..+... ....+..|...|..+...|++++|.
T Consensus 62 ~~~~~~~~~~~~---------~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~~a~~~~~~~~~~~A~ 130 (186)
T 3as5_A 62 TELLERSLADAP---------DNVKVATVLGLTYVQVQKYDLAVPLLIKVAEA--NPINFNVRFRLGVALDNLGRFDEAI 130 (186)
T ss_dssp HHHHHHHHHHCT---------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHhcCC---------CCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--CcHhHHHHHHHHHHHHHcCcHHHHH
Confidence 566777666532 223455555543 23455666665543 4456778888999999999999999
Q ss_pred HHHHHHHHCCCC
Q 037115 126 KMYHLGVQNLAE 137 (572)
Q Consensus 126 eIYqlGIqr~Aq 137 (572)
.+|+..+.....
T Consensus 131 ~~~~~~~~~~~~ 142 (186)
T 3as5_A 131 DSFKIALGLRPN 142 (186)
T ss_dssp HHHHHHHHHCTT
T ss_pred HHHHHHHhcCcc
Confidence 999999987643
No 28
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=81.69 E-value=3.3 Score=36.78 Aligned_cols=62 Identities=19% Similarity=0.181 Sum_probs=44.8
Q ss_pred chHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 71 DMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 71 D~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
+|.+..+|+.++.. .+++...|....... ..+..|...|..+...|++++|...|+..+...
T Consensus 114 ~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~---~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 181 (217)
T 2pl2_A 114 NPRYAPLHLQRGLVYALLGERDKAEASLKQALALE---DTPEIRSALAELYLSMGRLDEALAQYAKALEQA 181 (217)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred CcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc---cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 34445555555543 345667777766655 667778889999999999999999999998864
No 29
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=81.10 E-value=13 Score=27.83 Aligned_cols=74 Identities=14% Similarity=0.141 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
..++++++....+ + ..+|..++.. ...+..+|..+... ....+..|...|..+...|++++|.
T Consensus 29 ~~~~~~~~~~~~~------~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~la~~~~~~~~~~~A~ 97 (125)
T 1na0_A 29 IEYYQKALELDPN------N---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL--DPNNAEAWYNLGNAYYKQGDYDEAI 97 (125)
T ss_dssp HHHHHHHHHHCTT------C---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHCcC------c---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--CCccHHHHHHHHHHHHHhcCHHHHH
Confidence 5667777665322 2 3345555442 23455667666654 4455677788899999999999999
Q ss_pred HHHHHHHHCCC
Q 037115 126 KMYHLGVQNLA 136 (572)
Q Consensus 126 eIYqlGIqr~A 136 (572)
..|+..+....
T Consensus 98 ~~~~~~~~~~~ 108 (125)
T 1na0_A 98 EYYQKALELDP 108 (125)
T ss_dssp HHHHHHHHHCT
T ss_pred HHHHHHHHhCC
Confidence 99999998753
No 30
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=80.70 E-value=10 Score=29.40 Aligned_cols=51 Identities=10% Similarity=-0.103 Sum_probs=36.9
Q ss_pred CCHHHHHHHHHHCCcchh-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCC
Q 037115 86 DDPRVMLRTMEVNHIGTK-RSLFYQANALYYEKMKKFEEAEKMYHLGVQNLA 136 (572)
Q Consensus 86 dDP~dIF~fL~sngIGtk-lALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~A 136 (572)
+.+...|..+....-... .+..|...|..+...|++++|...|+..+....
T Consensus 56 ~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p 107 (129)
T 2xev_A 56 QLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYP 107 (129)
T ss_dssp HHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCC
Confidence 456667777666443331 145566678888899999999999999998763
No 31
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=80.31 E-value=15 Score=30.71 Aligned_cols=51 Identities=8% Similarity=0.031 Sum_probs=37.4
Q ss_pred CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 87 DPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 87 DP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
.+..+|.-+.....-...+..|...|..+...|++++|...|+.++.....
T Consensus 95 ~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~ 145 (225)
T 2vq2_A 95 ESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQ 145 (225)
T ss_dssp HHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 455677777663333445677788888888999999999999998886543
No 32
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=79.53 E-value=14 Score=27.42 Aligned_cols=75 Identities=13% Similarity=0.087 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
..++++++....++ ..+|..++.. .+.+...|.-... +....+..|..+|..+...|++++|.
T Consensus 24 ~~~~~~~~~~~~~~---------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~A~ 92 (118)
T 1elw_A 24 LQCYSEAIKLDPHN---------HVLYSNRSAAYAKKGDYQKAYEDGCKTVD--LKPDWGKGYSRKAAALEFLNRFEEAK 92 (118)
T ss_dssp HHHHHHHHHHCTTC---------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHCCCc---------HHHHHHHHHHHHhhccHHHHHHHHHHHHH--hCcccHHHHHHHHHHHHHHhhHHHHH
Confidence 45666666553322 3344444442 2334455555544 34556778889999999999999999
Q ss_pred HHHHHHHHCCCC
Q 037115 126 KMYHLGVQNLAE 137 (572)
Q Consensus 126 eIYqlGIqr~Aq 137 (572)
..|+.++.....
T Consensus 93 ~~~~~~~~~~~~ 104 (118)
T 1elw_A 93 RTYEEGLKHEAN 104 (118)
T ss_dssp HHHHHHHTTCTT
T ss_pred HHHHHHHHcCCC
Confidence 999999987644
No 33
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=79.04 E-value=9.2 Score=32.72 Aligned_cols=122 Identities=9% Similarity=0.006 Sum_probs=68.2
Q ss_pred hHhHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHhhCCCCcccCchHHHHHHHHHHhccccccccchHHHHHHHHHhcC--
Q 037115 7 VYDTFFSSLIQDIKSYSGTDPLLPWLQGIKKMKDSLPSKLLKEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF-- 84 (572)
Q Consensus 7 ~~~~~fssLes~I~sYsGDDPLdpWlrYIkWiEEsyPsGg~ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~-- 84 (572)
.+++....|...|... ++| ..|.....-... .| .-..-...+++++....+.. .+.+....+|...+..
T Consensus 20 ~~~~A~~~~~~a~~~~--~~~-~~~~~~~~~~~~---~~-~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~~l~~~~~ 90 (258)
T 3uq3_A 20 QFDEAIEHYNKAWELH--KDI-TYLNNRAAAEYE---KG-EYETAISTLNDAVEQGREMR--ADYKVISKSFARIGNAYH 90 (258)
T ss_dssp CHHHHHHHHHHHHHHS--CCT-HHHHHHHHHHHH---TT-CHHHHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhh--ccH-HHHHHHHHHHHH---cc-cHHHHHHHHHHHHHhCcccc--cchHHHHHHHHHHHHHHH
Confidence 3455666677777765 443 344333222211 11 11222456666666544332 1122234555555543
Q ss_pred ----cCCHHHHHHHHHHCC------------------------cchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCC
Q 037115 85 ----VDDPRVMLRTMEVNH------------------------IGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLA 136 (572)
Q Consensus 85 ----~dDP~dIF~fL~sng------------------------IGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~A 136 (572)
.+.+...|....... +....+..|...|..+...|++++|...|+..+....
T Consensus 91 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 170 (258)
T 3uq3_A 91 KLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAP 170 (258)
T ss_dssp HTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCc
Confidence 223455555554421 5566777888888999999999999999999988653
Q ss_pred C
Q 037115 137 E 137 (572)
Q Consensus 137 q 137 (572)
.
T Consensus 171 ~ 171 (258)
T 3uq3_A 171 E 171 (258)
T ss_dssp T
T ss_pred c
Confidence 3
No 34
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=78.94 E-value=18 Score=27.61 Aligned_cols=73 Identities=10% Similarity=0.027 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC---c---CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF---V---DDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~---~---dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
..++++++....+ ...+|..++.. . +++...|..... +....+..|..+|..+...|++++|.
T Consensus 36 ~~~~~~al~~~~~---------~~~~~~~la~~~~~~~~~~~A~~~~~~a~~--~~~~~~~~~~~la~~~~~~~~~~~A~ 104 (133)
T 2lni_A 36 MKHYTEAIKRNPK---------DAKLYSNRAACYTKLLEFQLALKDCEECIQ--LEPTFIKGYTRKAAALEAMKDYTKAM 104 (133)
T ss_dssp HHHHHHHHTTCTT---------CHHHHHHHHHHHTTTTCHHHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHcCCC---------cHHHHHHHHHHHHHhccHHHHHHHHHHHHH--hCCCchHHHHHHHHHHHHHhhHHHHH
Confidence 4566666554222 23455555543 2 234455555554 45567888899999999999999999
Q ss_pred HHHHHHHHCC
Q 037115 126 KMYHLGVQNL 135 (572)
Q Consensus 126 eIYqlGIqr~ 135 (572)
+.|+.++...
T Consensus 105 ~~~~~~~~~~ 114 (133)
T 2lni_A 105 DVYQKALDLD 114 (133)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhC
Confidence 9999999875
No 35
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=78.55 E-value=4.3 Score=35.87 Aligned_cols=33 Identities=24% Similarity=0.223 Sum_probs=20.2
Q ss_pred chhhHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 037115 101 GTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQ 133 (572)
Q Consensus 101 GtklALFYEaWA~~LE~~g~fkeAdeIYqlGIq 133 (572)
....+..|...|.++...|++++|...|+.++.
T Consensus 191 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 223 (311)
T 3nf1_A 191 DPNVAKTKNNLASCYLKQGKFKQAETLYKEILT 223 (311)
T ss_dssp CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344455566666666666666666666666664
No 36
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=78.10 E-value=2.3 Score=33.46 Aligned_cols=62 Identities=13% Similarity=0.133 Sum_probs=42.2
Q ss_pred chHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC
Q 037115 71 DMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQN 134 (572)
Q Consensus 71 D~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr 134 (572)
|+....+|..++.. .+.+...|...... ....+..|...|..+...|++++|.+.|+.++..
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 70 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVET--DPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEV 70 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 34445556555543 23455666665543 4455667778899999999999999999999964
No 37
>3d5l_A Regulatory protein RECX; PSI-II, NYSGXRC, DNA repair, 10123K, structural genomi protein structure initiative; 2.35A {Lactobacillus reuteri}
Probab=78.02 E-value=7.2 Score=37.17 Aligned_cols=96 Identities=15% Similarity=0.171 Sum_probs=57.2
Q ss_pred HHHHHHHHHhccccccccchHHHHHHHHHhcC--cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHH
Q 037115 53 RFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF--VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHL 130 (572)
Q Consensus 53 ~LLERCtr~FkddERYKND~RYLKIWLkYAd~--~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYql 130 (572)
..++.++.++. ...|-||.||.+.|+...-. -.-|..|-+.|..+||...+..= +.+.+ ....-+..|..+.++
T Consensus 93 e~i~~vl~~L~-~~g~ldD~rfA~~~v~~~~~~~~~G~~~I~~eL~~KGI~~~~I~~--al~~~-~~~~e~e~a~~l~~K 168 (221)
T 3d5l_A 93 EFVEPILKKLR-GQQLIDDHAYAASYVRTMINTDLKGPGIIRQHLRQKGIGESDIDD--ALTQF-TPEVQAELAKKLALK 168 (221)
T ss_dssp HHHHHHHHHHH-HTTCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHTTCCHHHHHH--HGGGC-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HcCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHcCCCHHHHHH--HHHhC-CHHHHHHHHHHHHHH
Confidence 34445554433 34999999999999988643 35699999999999999876531 11111 001112345555554
Q ss_pred HHHC-CCCcHHHHHHHHHHHHHH
Q 037115 131 GVQN-LAEPADELQKSYEQFLHR 152 (572)
Q Consensus 131 GIqr-~AqPldrLk~ay~qFq~R 152 (572)
=... ...+....+++...|+.|
T Consensus 169 k~~~~~~~~~~~~k~K~~~~L~r 191 (221)
T 3d5l_A 169 LFRRYRNQPERRREQKVQQGLTT 191 (221)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHHH
T ss_pred HHhhccCCChHHHHHHHHHHHHh
Confidence 4333 223445555666666544
No 38
>3c1d_A Protein ORAA, regulatory protein RECX; tandem repeats, helix-turn-helix, cytoplasm, DNA damage, DNA repair, SOS response, DNA binding protein; 1.80A {Escherichia coli}
Probab=77.85 E-value=13 Score=33.55 Aligned_cols=52 Identities=10% Similarity=0.163 Sum_probs=39.0
Q ss_pred HHHHHHHHHhccccccccchHHHHHHHHHhcC-cCCHHHHHHHHHHCCcchhhH
Q 037115 53 RFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF-VDDPRVMLRTMEVNHIGTKRS 105 (572)
Q Consensus 53 ~LLERCtr~FkddERYKND~RYLKIWLkYAd~-~dDP~dIF~fL~sngIGtklA 105 (572)
..++.+|.++. ...|-||.||...|+...-. -.-|..|-+.|..+||...+.
T Consensus 47 ~~i~~vl~~l~-~~g~ldD~rfA~~~v~~~~~~g~G~~~I~~eL~~KGI~~~~i 99 (159)
T 3c1d_A 47 EDYERVIAWCH-EHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGISREAT 99 (159)
T ss_dssp HHHHHHHHHHH-HTTSCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHH-HcCCcCHHHHHHHHHHHHHhCCccHHHHHHHHHHcCCCHHHH
Confidence 34444444433 34999999999999987643 246999999999999998764
No 39
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=77.71 E-value=6.8 Score=37.67 Aligned_cols=127 Identities=9% Similarity=0.055 Sum_probs=71.8
Q ss_pred chhHhHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHhhCCCCcccCchHHHHHHHHHHhccccccccchHHHHHHHHHhcC
Q 037115 5 DAVYDTFFSSLIQDIKSYSGTDPLLPWLQGIKKMKDSLPSKLLKEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF 84 (572)
Q Consensus 5 ~~~~~~~fssLes~I~sYsGDDPLdpWlrYIkWiEEsyPsGg~ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~ 84 (572)
......++.++...|........-. .+..+-++... .|.. ..=+..+++++..++....-..+++++-.|-.++..
T Consensus 28 ~~~l~~~e~~~~~~~~~~~~~~~a~-~yn~Lg~~~~~--~G~~-~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~ 103 (472)
T 4g1t_A 28 ENSLDDFEDKVFYRTEFQNREFKAT-MCNLLAYLKHL--KGQN-EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWV 103 (472)
T ss_dssp CCCHHHHHHHHHHHTTSCC---CCH-HHHHHHHHHHH--TTCH-HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHH--CCCH-HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHH
Confidence 3445666667766666543333333 33333333322 1211 122567888887777666666788888877766543
Q ss_pred ------cCCHHHHHHHHHH------CCcchhhH--HHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 85 ------VDDPRVMLRTMEV------NHIGTKRS--LFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 85 ------~dDP~dIF~fL~s------ngIGtklA--LFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
..++...|.-... ......++ .....||.+....++|++|.+.|++.+.-.
T Consensus 104 y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~ 168 (472)
T 4g1t_A 104 YYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKK 168 (472)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHS
T ss_pred HHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhC
Confidence 2334444443321 11122333 444667777777789999999999999864
No 40
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=76.69 E-value=19 Score=30.75 Aligned_cols=66 Identities=11% Similarity=-0.087 Sum_probs=49.6
Q ss_pred cchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 70 NDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 70 ND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
.++....+|..++.. .+.+...|.-... +....+..|...|..+...|++++|...|+.++.....
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~ 205 (258)
T 3uq3_A 134 VNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIK--RAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN 205 (258)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred cCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHh--cCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHH
Confidence 456677777777764 2345566665554 44556788899999999999999999999999987644
No 41
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=76.43 E-value=26 Score=33.99 Aligned_cols=90 Identities=10% Similarity=-0.004 Sum_probs=59.6
Q ss_pred HHHHHHHHHHhccccccccchH--HHHHHHHHh-----------cCcCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHc
Q 037115 52 PRFLQKCAQTFESDRRYRNDMR--YLRIWLHLM-----------DFVDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKM 118 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~R--YLKIWLkYA-----------d~~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~ 118 (572)
...+++++....+........- +.+.|+.+. .....+...|.-.... ....+..|...|.++...
T Consensus 398 ~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~--~p~~~~~~~~l~~~~~~~ 475 (537)
T 3fp2_A 398 IKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACEL--DPRSEQAKIGLAQLKLQM 475 (537)
T ss_dssp HHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHh
Confidence 5677777777766655544442 222233322 2344566777766654 345667788899999999
Q ss_pred cCHHHHHHHHHHHHHCCCCcHHHHH
Q 037115 119 KKFEEAEKMYHLGVQNLAEPADELQ 143 (572)
Q Consensus 119 g~fkeAdeIYqlGIqr~AqPldrLk 143 (572)
|++++|.+.|+..++......+.+.
T Consensus 476 g~~~~A~~~~~~al~~~~~~~~~~~ 500 (537)
T 3fp2_A 476 EKIDEAIELFEDSAILARTMDEKLQ 500 (537)
T ss_dssp TCHHHHHHHHHHHHHHC--CHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCcHHHHH
Confidence 9999999999999998766655544
No 42
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.63 E-value=5.6 Score=31.27 Aligned_cols=77 Identities=6% Similarity=-0.121 Sum_probs=49.9
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
..+++++++.. .++.-...+|+.++.. ..++...|...... ....+..|...|..+...|++++|.
T Consensus 48 ~~~~~~a~~~~------~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~~a~~~~~~~~~~~A~ 119 (148)
T 2dba_A 48 LAAYTQALGLD------ATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK--DGGDVKALYRRSQALEKLGRLDQAV 119 (148)
T ss_dssp HHHHHHHHTSC------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--TSCCHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHc------ccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh--CccCHHHHHHHHHHHHHcCCHHHHH
Confidence 45556655432 2333345566655553 23455566555543 3445777888899999999999999
Q ss_pred HHHHHHHHCCC
Q 037115 126 KMYHLGVQNLA 136 (572)
Q Consensus 126 eIYqlGIqr~A 136 (572)
..|+.++....
T Consensus 120 ~~~~~al~~~p 130 (148)
T 2dba_A 120 LDLQRCVSLEP 130 (148)
T ss_dssp HHHHHHHHHCS
T ss_pred HHHHHHHHcCC
Confidence 99999998653
No 43
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=75.38 E-value=5.6 Score=31.56 Aligned_cols=79 Identities=8% Similarity=0.043 Sum_probs=56.8
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
...+++++... .+|+....+|+.++.. ..++...|.-.... .-..+..|...|..+...|++++|.
T Consensus 10 ~~~~~~al~~~------~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 10 VPYYEKAIASG------LQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQ--FPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp HHHHHHHHSSC------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHcC------CCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCchHHHHHHHHHHHHcCCHHHHH
Confidence 45666666531 2377888888888764 23456666666554 4455777888899999999999999
Q ss_pred HHHHHHHHCCCCc
Q 037115 126 KMYHLGVQNLAEP 138 (572)
Q Consensus 126 eIYqlGIqr~AqP 138 (572)
..|+.++......
T Consensus 82 ~~~~~al~~~p~~ 94 (117)
T 3k9i_A 82 ELLLKIIAETSDD 94 (117)
T ss_dssp HHHHHHHHHHCCC
T ss_pred HHHHHHHHhCCCc
Confidence 9999999875443
No 44
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=75.19 E-value=22 Score=27.63 Aligned_cols=48 Identities=13% Similarity=0.049 Sum_probs=37.5
Q ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 86 DDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 86 dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
+.+...|..... +....+..|..+|..+...|++.+|...|+.++...
T Consensus 36 ~~A~~~~~~al~--~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 83 (115)
T 2kat_A 36 DAALPHLRAALD--FDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAA 83 (115)
T ss_dssp HHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--HCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc
Confidence 345566665554 445667788899999999999999999999999753
No 45
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=74.96 E-value=25 Score=32.32 Aligned_cols=80 Identities=9% Similarity=0.057 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcCc---C---CHHHHHHHH----HHCCcchhhHHHHHHHHHHHHHcc-C
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDFV---D---DPRVMLRTM----EVNHIGTKRSLFYQANALYYEKMK-K 120 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~~---d---DP~dIF~fL----~sngIGtklALFYEaWA~~LE~~g-~ 120 (572)
...+++++..+.... .+......+|..++... . .+...|... ...+--..++..|...+..+...| .
T Consensus 175 ~~~~~~al~~~~~~~--~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~ 252 (293)
T 3u3w_A 175 IDLFEQILKQLEALH--DNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYE 252 (293)
T ss_dssp HHHHHHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhcc--cchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCc
Confidence 567778877765542 36677777887777642 2 344444432 233344456899999999999999 5
Q ss_pred HHHHHHHHHHHHH
Q 037115 121 FEEAEKMYHLGVQ 133 (572)
Q Consensus 121 fkeAdeIYqlGIq 133 (572)
+++|.+.|++++.
T Consensus 253 ~~~A~~~~~~Al~ 265 (293)
T 3u3w_A 253 EAEIEDAYKKASF 265 (293)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7999999999875
No 46
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=74.51 E-value=18 Score=31.38 Aligned_cols=67 Identities=12% Similarity=-0.011 Sum_probs=47.3
Q ss_pred cchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCc
Q 037115 70 NDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEP 138 (572)
Q Consensus 70 ND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqP 138 (572)
.++....+|..++.. .+.+..+|..+... ....+..|...|.++...|++++|..+|+..+......
T Consensus 136 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~--~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~ 208 (252)
T 2ho1_A 136 LYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRL--NRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQN 208 (252)
T ss_dssp TCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCC
T ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCc
Confidence 344455666665553 23455666665543 34567888899999999999999999999999865443
No 47
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=72.32 E-value=14 Score=30.77 Aligned_cols=48 Identities=6% Similarity=-0.040 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCC
Q 037115 87 DPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLA 136 (572)
Q Consensus 87 DP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~A 136 (572)
.+...|..+.. +.......|...|..+...|++++|..+|+..+....
T Consensus 131 ~A~~~~~~~~~--~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 131 LAEAYLKRSLA--AQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp HHHHHHHHHHH--HSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHH--hCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 45566666554 3445677888999999999999999999999998654
No 48
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=72.20 E-value=7.4 Score=34.37 Aligned_cols=82 Identities=12% Similarity=0.070 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC---cC---CHHHHHHHHHHC------CcchhhHHHHHHHHHHHHHcc
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF---VD---DPRVMLRTMEVN------HIGTKRSLFYQANALYYEKMK 119 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~---~d---DP~dIF~fL~sn------gIGtklALFYEaWA~~LE~~g 119 (572)
..++++++..+..... .+++....+|..++.. .. .+...|...... +--...+..|...|.++...|
T Consensus 89 ~~~~~~al~~~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 167 (311)
T 3nf1_A 89 ANLLNDALAIREKTLG-KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQG 167 (311)
T ss_dssp HHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcC
Confidence 4566666666533210 3456666677766653 22 355555554433 223566778888999999999
Q ss_pred CHHHHHHHHHHHHHC
Q 037115 120 KFEEAEKMYHLGVQN 134 (572)
Q Consensus 120 ~fkeAdeIYqlGIqr 134 (572)
++++|..+|+.++..
T Consensus 168 ~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 168 KYEEVEYYYQRALEI 182 (311)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999886
No 49
>3e3v_A Regulatory protein RECX; PSI-II, NYSGXRC, structural genomics, protein initiative; 2.04A {Lactobacillus salivarius}
Probab=71.65 E-value=13 Score=34.35 Aligned_cols=96 Identities=15% Similarity=0.132 Sum_probs=58.6
Q ss_pred HHHHHHHHHhccccccccchHHHHHHHHHhcC--cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHH
Q 037115 53 RFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF--VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHL 130 (572)
Q Consensus 53 ~LLERCtr~FkddERYKND~RYLKIWLkYAd~--~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYql 130 (572)
..++.++.++. ...|-||.||.+.|+...-. -.-|..|-+.|..+||...+..=.. +.+ ....-++.|..+.++
T Consensus 50 ~~ie~vl~~L~-~~g~ldD~rfA~~~vr~~~~~~~~G~~~I~~eL~~KGI~~~~I~~al--~~~-~~~de~e~a~~l~~K 125 (177)
T 3e3v_A 50 DYISEIINKLI-DLDLINDKNYAESYVRTMMNTSDKGPKVIKLNLSKKGIDDNIAEDAL--ILY-TDKLQVEKGVTLAEK 125 (177)
T ss_dssp HHHHHHHHHHH-HTTSSCHHHHHHHHHHHHHHHCCCCHHHHHHHHHTTTCCHHHHHHHH--TTS-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HcCCCCHHHHHHHHHHHHHHcccccHHHHHHHHHHcCCCHHHHHHHH--HhC-CchhHHHHHHHHHHH
Confidence 45555555543 34899999999999987653 3579999999999999987653211 111 011223455555555
Q ss_pred HHHC-CCCcHHHHHHHHHHHHHH
Q 037115 131 GVQN-LAEPADELQKSYEQFLHR 152 (572)
Q Consensus 131 GIqr-~AqPldrLk~ay~qFq~R 152 (572)
=... ...|....+++...|+.|
T Consensus 126 k~~~~~~~~~~~~~~K~~~~L~r 148 (177)
T 3e3v_A 126 LANRYSHDSYRNKQNKIKQSLLT 148 (177)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHHH
T ss_pred HHhhccCCChHHHHHHHHHHHHH
Confidence 3332 233444555555566654
No 50
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=71.24 E-value=18 Score=28.29 Aligned_cols=73 Identities=5% Similarity=-0.127 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
...+++++....+ ...+|..++.. .+.+...|..... +....+..|...|..+...|++++|.
T Consensus 29 ~~~~~~al~~~~~---------~~~~~~~l~~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~l~~~~~~~~~~~~A~ 97 (137)
T 3q49_B 29 AACYGRAITRNPL---------VAVYYTNRALCYLKMQQPEQALADCRRALE--LDGQSVKAHFFLGQCQLEMESYDEAI 97 (137)
T ss_dssp HHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHhhCcC---------cHHHHHHHHHHHHHhcCHHHHHHHHHHHHH--hCchhHHHHHHHHHHHHHHhhHHHHH
Confidence 4566666665332 23445554443 2345555555544 45667888889999999999999999
Q ss_pred HHHHHHHHCC
Q 037115 126 KMYHLGVQNL 135 (572)
Q Consensus 126 eIYqlGIqr~ 135 (572)
..|+.++...
T Consensus 98 ~~~~~a~~~~ 107 (137)
T 3q49_B 98 ANLQRAYSLA 107 (137)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHC
Confidence 9999998753
No 51
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=70.73 E-value=22 Score=33.68 Aligned_cols=78 Identities=19% Similarity=0.197 Sum_probs=53.0
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC---cCC---HHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF---VDD---PRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~---~dD---P~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
...+++++...... +|+.+...+..++.. ..+ ......++...+.-...+..|...|.++...|++++|.
T Consensus 284 ~~~~~~al~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~la~~y~~~g~~~~A~ 359 (383)
T 3ulq_A 284 HEYHSKGMAYSQKA----GDVIYLSEFEFLKSLYLSGPDEEAIQGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKAS 359 (383)
T ss_dssp HHHHHHHHHHHHHH----TCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 45666666655432 334443332222322 233 55666777777777788889999999999999999999
Q ss_pred HHHHHHHH
Q 037115 126 KMYHLGVQ 133 (572)
Q Consensus 126 eIYqlGIq 133 (572)
..|++++.
T Consensus 360 ~~~~~al~ 367 (383)
T 3ulq_A 360 AYFLKVEQ 367 (383)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998876
No 52
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=70.50 E-value=26 Score=29.11 Aligned_cols=31 Identities=13% Similarity=-0.022 Sum_probs=21.3
Q ss_pred hhHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 037115 103 KRSLFYQANALYYEKMKKFEEAEKMYHLGVQ 133 (572)
Q Consensus 103 klALFYEaWA~~LE~~g~fkeAdeIYqlGIq 133 (572)
..+..|...|..+...|++++|...|+.++.
T Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 135 (203)
T 3gw4_A 105 AASANAYEVATVALHFGDLAGARQEYEKSLV 135 (203)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4455666667777777777777777777764
No 53
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=70.30 E-value=16 Score=28.29 Aligned_cols=80 Identities=5% Similarity=-0.101 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC---cC---CHHHHHHHHH----HCCcchhhHHHHHHHHHHHHHccCH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF---VD---DPRVMLRTME----VNHIGTKRSLFYQANALYYEKMKKF 121 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~---~d---DP~dIF~fL~----sngIGtklALFYEaWA~~LE~~g~f 121 (572)
...+++++..+... .+......+|..++.. .. .+...|.-.. ..+--...+..|...|..+...|++
T Consensus 69 ~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 145 (164)
T 3ro3_A 69 SEYYKKTLLLARQL---KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNH 145 (164)
T ss_dssp HHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHh---CCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCH
Confidence 56777777776543 2333344555555543 22 3444444332 2333345577888899999999999
Q ss_pred HHHHHHHHHHHHC
Q 037115 122 EEAEKMYHLGVQN 134 (572)
Q Consensus 122 keAdeIYqlGIqr 134 (572)
++|...|+.++.-
T Consensus 146 ~~A~~~~~~a~~~ 158 (164)
T 3ro3_A 146 DQAMHFAEKHLEI 158 (164)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998863
No 54
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=69.22 E-value=13 Score=34.78 Aligned_cols=29 Identities=10% Similarity=0.047 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 037115 105 SLFYQANALYYEKMKKFEEAEKMYHLGVQ 133 (572)
Q Consensus 105 ALFYEaWA~~LE~~g~fkeAdeIYqlGIq 133 (572)
+..|...|.++...|++++|...|+.++.
T Consensus 303 ~~~~~~la~~~~~~g~~~~A~~~~~~al~ 331 (411)
T 4a1s_A 303 AQSCYSLGNTYTLLHEFNTAIEYHNRHLA 331 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 44444445555555555555555554443
No 55
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=69.20 E-value=16 Score=28.42 Aligned_cols=32 Identities=9% Similarity=-0.014 Sum_probs=28.1
Q ss_pred hhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC
Q 037115 103 KRSLFYQANALYYEKMKKFEEAEKMYHLGVQN 134 (572)
Q Consensus 103 klALFYEaWA~~LE~~g~fkeAdeIYqlGIqr 134 (572)
..+..|...|..+...|++++|...|+.++..
T Consensus 87 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 118 (164)
T 3ro3_A 87 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 118 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34778888999999999999999999999864
No 56
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=68.74 E-value=16 Score=34.75 Aligned_cols=78 Identities=17% Similarity=0.240 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC---cCC---HHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF---VDD---PRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~---~dD---P~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
...+++++...... +|+.|...+..+... ..+ ....+.++...+.-...+.+|...|.++...|++++|.
T Consensus 281 ~~~~~~al~~~~~~----~~~~~~~~~~~l~~ly~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~la~~y~~~g~~~~A~ 356 (378)
T 3q15_A 281 FQFIEEGLDHITAR----SHKFYKELFLFLQAVYKETVDERKIHDLLSYFEKKNLHAYIEACARSAAAVFESSCHFEQAA 356 (378)
T ss_dssp HHHHHHHHHHCCTT----CCSCHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHCCCHHHHH
Confidence 45667766665442 223333322222221 223 55667777777777788889999999999999999999
Q ss_pred HHHHHHHH
Q 037115 126 KMYHLGVQ 133 (572)
Q Consensus 126 eIYqlGIq 133 (572)
..|++++.
T Consensus 357 ~~~~~al~ 364 (378)
T 3q15_A 357 AFYRKVLK 364 (378)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999875
No 57
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=68.63 E-value=28 Score=27.26 Aligned_cols=47 Identities=9% Similarity=-0.084 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 87 DPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 87 DP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
.+...|..... +....+..|...|..+...|++++|...|+.++...
T Consensus 56 ~A~~~~~~al~--~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 56 EAIADCNKAIE--KDPNFVRAYIRKATAQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--hCCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhC
Confidence 44555555443 456667788889999999999999999999998865
No 58
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=68.60 E-value=16 Score=26.98 Aligned_cols=51 Identities=12% Similarity=-0.133 Sum_probs=33.6
Q ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHc-cCHHHHHHHHHHHHHCCC
Q 037115 86 DDPRVMLRTMEVNHIGTKRSLFYQANALYYEKM-KKFEEAEKMYHLGVQNLA 136 (572)
Q Consensus 86 dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~-g~fkeAdeIYqlGIqr~A 136 (572)
+++...|.......-....+..|...|..+... |++++|.+.|+.++....
T Consensus 57 ~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p 108 (112)
T 2kck_A 57 EEAVDCYNYVINVIEDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHH 108 (112)
T ss_dssp HHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhccc
Confidence 345556665554433222566777778888888 888888888888776653
No 59
>3dfg_A Xcrecx, regulatory protein RECX; RECX RECA, homologous recombination, tandem repeats, three-helix bundle, cytoplasm; 1.50A {Xanthomonas campestris PV}
Probab=68.46 E-value=24 Score=31.97 Aligned_cols=53 Identities=8% Similarity=0.099 Sum_probs=41.0
Q ss_pred HHHHHHHHHhccccccccchHHHHHHHHHhcC-cCCHHHHHHHHHHCCcchhhHH
Q 037115 53 RFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF-VDDPRVMLRTMEVNHIGTKRSL 106 (572)
Q Consensus 53 ~LLERCtr~FkddERYKND~RYLKIWLkYAd~-~dDP~dIF~fL~sngIGtklAL 106 (572)
.+++.+|.++.. ..|-||.||.+.|+...-. -.-|..|-+.|..+||...+..
T Consensus 49 e~Ie~vl~~l~~-~g~ldD~rfA~~~v~~~~~~~~G~~~I~~eL~~KGI~~~~I~ 102 (162)
T 3dfg_A 49 EAAQAAVERLAG-EGWQDDVRFAASVVRNRASSGYGPLHIRAELGTHGLDSDAVS 102 (162)
T ss_dssp HHHHHHHHHHHH-TTSCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHH-cCCCCHHHHHHHHHHHHHHccccHHHHHHHHHHcCCCHHHHH
Confidence 456666666444 3899999999999987643 3468999999999999987653
No 60
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=68.41 E-value=59 Score=28.17 Aligned_cols=31 Identities=23% Similarity=0.274 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 105 SLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 105 ALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
+..|...|.++...|++++|...|+.++...
T Consensus 215 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 245 (275)
T 1xnf_A 215 SETNFYLGKYYLSLGDLDSATALFKLAVANN 245 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHhCC
Confidence 6788899999999999999999999999876
No 61
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=67.22 E-value=47 Score=29.49 Aligned_cols=47 Identities=13% Similarity=0.126 Sum_probs=33.2
Q ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCC
Q 037115 88 PRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLA 136 (572)
Q Consensus 88 P~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~A 136 (572)
+...|..... +....+..|...|..+...|++++|...|+..+....
T Consensus 110 A~~~~~~a~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 156 (330)
T 3hym_B 110 ARRYLSKATT--LEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMK 156 (330)
T ss_dssp HHHHHHHHHT--TCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHH--hCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhcc
Confidence 4455555443 4455666777888888888888888888888887653
No 62
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=67.01 E-value=58 Score=28.88 Aligned_cols=25 Identities=16% Similarity=0.170 Sum_probs=15.6
Q ss_pred HHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 111 NALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 111 WA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
.|..+...|++++|...|+..+...
T Consensus 165 l~~~~~~~~~~~~A~~~~~~al~~~ 189 (330)
T 3hym_B 165 IGLEYGLTNNSKLAERFFSQALSIA 189 (330)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhC
Confidence 5555666666666666666666554
No 63
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=66.93 E-value=42 Score=28.49 Aligned_cols=33 Identities=6% Similarity=-0.063 Sum_probs=20.5
Q ss_pred hhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 103 KRSLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 103 klALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
..+..|...|..+...|++++|..+|+..+...
T Consensus 157 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~ 189 (243)
T 2q7f_A 157 NDTEARFQFGMCLANEGMLDEALSQFAAVTEQD 189 (243)
T ss_dssp TCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 345556666666666666666666666666653
No 64
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=66.41 E-value=27 Score=33.02 Aligned_cols=76 Identities=7% Similarity=0.029 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHH------------H
Q 037115 51 LPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQAN------------A 112 (572)
Q Consensus 51 L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaW------------A 112 (572)
-..++++++....+ ...+|...+.. .+.+..+|..+.. +......+|..+ +
T Consensus 196 A~~~~~~~~~~~~~---------~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~ 264 (450)
T 2y4t_A 196 AISDLKAASKLKND---------NTEAFYKISTLYYQLGDHELSLSEVRECLK--LDQDHKRCFAHYKQVKKLNKLIESA 264 (450)
T ss_dssp GHHHHHHHHHHHCS---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC---------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCChHHHHHHHHHHHHHHHHHHHH
Confidence 35677777766332 23445444442 2345666766653 444455555555 8
Q ss_pred HHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 113 LYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 113 ~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
..+...|++++|..+|+..+.....
T Consensus 265 ~~~~~~g~~~~A~~~~~~~l~~~p~ 289 (450)
T 2y4t_A 265 EELIRDGRYTDATSKYESVMKTEPS 289 (450)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 8888899999999999999886433
No 65
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=66.01 E-value=18 Score=31.80 Aligned_cols=56 Identities=20% Similarity=0.339 Sum_probs=44.0
Q ss_pred hhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC-------C-CCc--HHHHHHHHHHHHHHHHHHHh
Q 037115 103 KRSLFYQANALYYEKMKKFEEAEKMYHLGVQN-------L-AEP--ADELQKSYEQFLHRMERHNK 158 (572)
Q Consensus 103 klALFYEaWA~~LE~~g~fkeAdeIYqlGIqr-------~-AqP--ldrLk~ay~qFq~Rm~rr~~ 158 (572)
.-|.++..=|..++..|+|++|...|..||.- . -.| .+.|+.+..+++.|.+....
T Consensus 16 ~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~alk~e~~~~~~k~~lr~K~~eYl~RAE~LK~ 81 (117)
T 2cpt_A 16 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLKE 81 (117)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778888899999999999999999999873 1 122 45688888888888887643
No 66
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=66.00 E-value=39 Score=33.47 Aligned_cols=51 Identities=12% Similarity=0.112 Sum_probs=33.4
Q ss_pred cCCHHHHHHHHHHC----Ccchh-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 85 VDDPRVMLRTMEVN----HIGTK-RSLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 85 ~dDP~dIF~fL~sn----gIGtk-lALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
.+++..+|..+... ++-.. .+..|...+..+...|++++|.++|+..+...
T Consensus 491 ~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 546 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLS 546 (597)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 34566667666554 33333 36677777777777777777777777777654
No 67
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=65.57 E-value=19 Score=31.24 Aligned_cols=64 Identities=11% Similarity=0.111 Sum_probs=43.8
Q ss_pred cchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 70 NDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 70 ND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
-||.....|..++.. .+++..+|..+... --..+.+|...+..+...|+|++|...|++++.-.
T Consensus 31 l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~--~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~ 100 (151)
T 3gyz_A 31 IPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY--DFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALG 100 (151)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC
Confidence 366667777666543 24566666666543 44567777777888888888888888888888754
No 68
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=65.50 E-value=50 Score=26.28 Aligned_cols=76 Identities=13% Similarity=-0.057 Sum_probs=50.7
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
...+++++....+ ...+|..++.. ...+...|..... +....+..|..+|..+...|++++|.
T Consensus 33 ~~~~~~al~~~~~---------~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~--~~~~~~~~~~~~a~~~~~~~~~~~A~ 101 (166)
T 1a17_A 33 IKFYSQAIELNPS---------NAIYYGNRSLAYLRTECYGYALGDATRAIE--LDKKYIKGYYRRAASNMALGKFRAAL 101 (166)
T ss_dssp HHHHHHHHHHSTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHhCCC---------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCcccHHHHHHHHHHHHHhccHHHHH
Confidence 4556666654322 23445444442 2345555555554 34567788899999999999999999
Q ss_pred HHHHHHHHCCCCc
Q 037115 126 KMYHLGVQNLAEP 138 (572)
Q Consensus 126 eIYqlGIqr~AqP 138 (572)
..|+.++...-..
T Consensus 102 ~~~~~a~~~~p~~ 114 (166)
T 1a17_A 102 RDYETVVKVKPHD 114 (166)
T ss_dssp HHHHHHHHHSTTC
T ss_pred HHHHHHHHhCCCC
Confidence 9999999875443
No 69
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=65.10 E-value=23 Score=33.06 Aligned_cols=29 Identities=10% Similarity=0.182 Sum_probs=18.8
Q ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 037115 104 RSLFYQANALYYEKMKKFEEAEKMYHLGVQ 133 (572)
Q Consensus 104 lALFYEaWA~~LE~~g~fkeAdeIYqlGIq 133 (572)
.+..|...|.+++. |++++|...|++++.
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~ 143 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAA 143 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHH
Confidence 35556666666666 777777777766665
No 70
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=64.67 E-value=22 Score=33.43 Aligned_cols=66 Identities=14% Similarity=0.220 Sum_probs=47.4
Q ss_pred HHHHHHHHHhc---CcCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCcHH
Q 037115 73 RYLRIWLHLMD---FVDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEPAD 140 (572)
Q Consensus 73 RYLKIWLkYAd---~~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqPld 140 (572)
++...|+.+.. ...++..+|.-+... ....+..|...|.++...|+|++|...|+..+...-.-.+
T Consensus 167 ~l~~a~~~l~~~~~~~~eA~~~~~~~l~~--~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~ 235 (291)
T 3mkr_A 167 QLATAWVSLAAGGEKLQDAYYIFQEMADK--CSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPE 235 (291)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHHHHHH--SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 33455666542 345677888887776 3456778888888999999999999999999987544433
No 71
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=64.64 E-value=39 Score=31.00 Aligned_cols=51 Identities=14% Similarity=0.101 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHHHHccCHHHH-HHHHHHHHHC-CCCcHHHHHHHHHHHHHHHH
Q 037115 104 RSLFYQANALYYEKMKKFEEA-EKMYHLGVQN-LAEPADELQKSYEQFLHRME 154 (572)
Q Consensus 104 lALFYEaWA~~LE~~g~fkeA-deIYqlGIqr-~AqPldrLk~ay~qFq~Rm~ 154 (572)
++..|-..|.++...|++++| ...|++++.- ......++.+.+.....|++
T Consensus 235 ~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~~~~~~~~~~~~~~~~~~ 287 (293)
T 2qfc_A 235 IGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHAYKEALVNKISRLE 287 (293)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhCcHhhHHHHHHHHHHHh
Confidence 577888888888888888888 7778877642 11222334455554444443
No 72
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=64.57 E-value=79 Score=30.18 Aligned_cols=86 Identities=6% Similarity=-0.103 Sum_probs=55.5
Q ss_pred HHHHHHHHHHhccccccccc--hHHHHHHHHHh----cCcCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRND--MRYLRIWLHLM----DFVDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND--~RYLKIWLkYA----d~~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
..++++++....+....... ..+...++.+. .....+...|..+.. +....+..|...|.++...|++++|.
T Consensus 392 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~--~~~~~~~~~~~la~~~~~~g~~~~A~ 469 (514)
T 2gw1_A 392 LKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASK--LDPRSEQAKIGLAQMKLQQEDIDEAI 469 (514)
T ss_dssp HHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHH--hCcccHHHHHHHHHHHHHhcCHHHHH
Confidence 46667776665544332221 33333333332 123456667766655 34566788889999999999999999
Q ss_pred HHHHHHHHCCCCcH
Q 037115 126 KMYHLGVQNLAEPA 139 (572)
Q Consensus 126 eIYqlGIqr~AqPl 139 (572)
..|+..+.....-.
T Consensus 470 ~~~~~a~~~~~~~~ 483 (514)
T 2gw1_A 470 TLFEESADLARTME 483 (514)
T ss_dssp HHHHHHHHHCSSHH
T ss_pred HHHHHHHHhccccH
Confidence 99999999765433
No 73
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=64.55 E-value=27 Score=28.62 Aligned_cols=47 Identities=17% Similarity=0.085 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 87 DPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 87 DP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
.+...|.... .+....+..|...|..+...|+|++|.+.|+.+++-.
T Consensus 65 ~A~~~~~~al--~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~ 111 (126)
T 4gco_A 65 RALDDCDTCI--RLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVD 111 (126)
T ss_dssp HHHHHHHHHH--HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHH--HhhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 3445555444 4566778888899999999999999999999999864
No 74
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=64.16 E-value=29 Score=29.39 Aligned_cols=78 Identities=13% Similarity=0.092 Sum_probs=52.6
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCC--------------cchhhHHHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNH--------------IGTKRSLFYQAN 111 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sng--------------IGtklALFYEaW 111 (572)
...+++++... +.+..+|+.++.. .+.+...|....... +....+..|...
T Consensus 57 ~~~~~~al~~~---------~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (213)
T 1hh8_A 57 EKAFTRSINRD---------KHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNI 127 (213)
T ss_dssp HHHHHHHHHHC---------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHH
T ss_pred HHHHHHHHHhC---------ccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHH
Confidence 45666666653 2234455554442 345667777766633 333456778888
Q ss_pred HHHHHHccCHHHHHHHHHHHHHCCCCc
Q 037115 112 ALYYEKMKKFEEAEKMYHLGVQNLAEP 138 (572)
Q Consensus 112 A~~LE~~g~fkeAdeIYqlGIqr~AqP 138 (572)
|..+...|++++|...|+..+......
T Consensus 128 ~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 128 AFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred HHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 899999999999999999999886543
No 75
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=63.97 E-value=72 Score=27.60 Aligned_cols=121 Identities=8% Similarity=-0.130 Sum_probs=71.9
Q ss_pred hhHhHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHhhCCCCcccCchHHHHHHHHHHhccccccccchHHHHHHHHHhcC-
Q 037115 6 AVYDTFFSSLIQDIKSYSGTDPLLPWLQGIKKMKDSLPSKLLKEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF- 84 (572)
Q Consensus 6 ~~~~~~fssLes~I~sYsGDDPLdpWlrYIkWiEEsyPsGg~ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~- 84 (572)
-.++.....+...|.....++|-.+...+. ...-.+-.| .-..-..++++++....+ +..+|..++..
T Consensus 19 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~-~~~~A~~~~~~al~~~~~---------~~~~~~~la~~~ 87 (275)
T 1xnf_A 19 LQQEVILARMEQILASRALTDDERAQLLYE-RGVLYDSLG-LRALARNDFSQALAIRPD---------MPEVFNYLGIYL 87 (275)
T ss_dssp HHHHHHHHHHHHHHTSSCCCHHHHHHHHHH-HHHHHHHTT-CHHHHHHHHHHHHHHCCC---------CHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhcccccCchhHHHHHH-HHHHHHHcc-cHHHHHHHHHHHHHcCCC---------cHHHHHHHHHHH
Confidence 456667777777777754444433322221 111111111 112225667777765322 33455555543
Q ss_pred -----cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCcH
Q 037115 85 -----VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEPA 139 (572)
Q Consensus 85 -----~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqPl 139 (572)
.+.+...|...... ....+..|...|.++...|++++|..+|+.++.......
T Consensus 88 ~~~~~~~~A~~~~~~al~~--~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 88 TQAGNFDAAYEAFDSVLEL--DPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp HHTTCHHHHHHHHHHHHHH--CTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHccCHHHHHHHHHHHHhc--CccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 34566777766653 444567888899999999999999999999998754443
No 76
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=63.40 E-value=63 Score=26.74 Aligned_cols=37 Identities=19% Similarity=0.224 Sum_probs=26.8
Q ss_pred CcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 99 HIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 99 gIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
.+.......|...|..+...|+|++|.+.|+..++..
T Consensus 101 ~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~ 137 (184)
T 3vtx_A 101 ALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIK 137 (184)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhc
Confidence 3445556667777777888888888888888887754
No 77
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=63.37 E-value=15 Score=30.01 Aligned_cols=31 Identities=13% Similarity=0.257 Sum_probs=14.8
Q ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHHC
Q 037115 104 RSLFYQANALYYEKMKKFEEAEKMYHLGVQN 134 (572)
Q Consensus 104 lALFYEaWA~~LE~~g~fkeAdeIYqlGIqr 134 (572)
.+.+|...|..+...|+|++|...|+.++..
T Consensus 51 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 81 (142)
T 2xcb_A 51 DARYFLGLGACRQSLGLYEQALQSYSYGALM 81 (142)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 3444444444444455555555555554443
No 78
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=63.33 E-value=59 Score=26.40 Aligned_cols=73 Identities=11% Similarity=-0.032 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
..++++++..- +....+|..++.. ...+...|...... .-..+..|...|..+...|++++|.
T Consensus 38 ~~~~~~al~~~---------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~lg~~~~~~g~~~~A~ 106 (142)
T 2xcb_A 38 QKIFQALCMLD---------HYDARYFLGLGACRQSLGLYEQALQSYSYGALM--DINEPRFPFHAAECHLQLGDLDGAE 106 (142)
T ss_dssp HHHHHHHHHHC---------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCTHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHhC---------CccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc--CCCCcHHHHHHHHHHHHcCCHHHHH
Confidence 45566665542 2233445554442 23456666666553 4556667778899999999999999
Q ss_pred HHHHHHHHCC
Q 037115 126 KMYHLGVQNL 135 (572)
Q Consensus 126 eIYqlGIqr~ 135 (572)
..|+.++...
T Consensus 107 ~~~~~al~~~ 116 (142)
T 2xcb_A 107 SGFYSARALA 116 (142)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhC
Confidence 9999998764
No 79
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=62.69 E-value=33 Score=28.44 Aligned_cols=54 Identities=20% Similarity=0.208 Sum_probs=40.1
Q ss_pred hhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC-----C----CCcHHHHHHHHHHHHHHHHHH
Q 037115 103 KRSLFYQANALYYEKMKKFEEAEKMYHLGVQN-----L----AEPADELQKSYEQFLHRMERH 156 (572)
Q Consensus 103 klALFYEaWA~~LE~~g~fkeAdeIYqlGIqr-----~----AqPldrLk~ay~qFq~Rm~rr 156 (572)
.-|.-+..=|.-+++.|+|++|...|+.||+- + ..=.+.|..+..+++.|.+..
T Consensus 17 ~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~alk~e~d~~~k~~ir~K~~eY~~RAE~L 79 (83)
T 2w2u_A 17 EMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLVSLYRDGSTAAIYEQMINEYKRRIEVL 79 (83)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSTTSSTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44666777888999999999999999999985 1 222445777777777776654
No 80
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=62.42 E-value=39 Score=29.46 Aligned_cols=50 Identities=12% Similarity=0.037 Sum_probs=37.9
Q ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 86 DDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 86 dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
+.+...|..... +....+..|...|.++...|++++|...|+.++.....
T Consensus 91 ~~A~~~~~~a~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~ 140 (272)
T 3u4t_A 91 SLAIQQYQAAVD--RDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTT 140 (272)
T ss_dssp HHHHHHHHHHHH--HSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCC
T ss_pred HHHHHHHHHHHh--cCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCC
Confidence 345566666555 44556678888999999999999999999999887433
No 81
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=62.29 E-value=39 Score=25.22 Aligned_cols=51 Identities=12% Similarity=0.112 Sum_probs=36.0
Q ss_pred CHHHHHHHHHHCCcchhhHH-HHHHHHHHHHHccCHHHHHHHHHHHHHCCCCcH
Q 037115 87 DPRVMLRTMEVNHIGTKRSL-FYQANALYYEKMKKFEEAEKMYHLGVQNLAEPA 139 (572)
Q Consensus 87 DP~dIF~fL~sngIGtklAL-FYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqPl 139 (572)
.+...|..+... ....+. .|...|..+...|++++|.+.|+.++.....-.
T Consensus 18 ~A~~~~~~al~~--~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 69 (99)
T 2kc7_A 18 NALQALEEFLQT--EPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP 69 (99)
T ss_dssp HHHHHHHHHHHH--CSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHHH--CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 344445444432 333455 777788899999999999999999999765433
No 82
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=61.94 E-value=30 Score=28.14 Aligned_cols=56 Identities=21% Similarity=0.407 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC-------CCCc--HHHHHHHHHHHHHHHHHHHh
Q 037115 103 KRSLFYQANALYYEKMKKFEEAEKMYHLGVQN-------LAEP--ADELQKSYEQFLHRMERHNK 158 (572)
Q Consensus 103 klALFYEaWA~~LE~~g~fkeAdeIYqlGIqr-------~AqP--ldrLk~ay~qFq~Rm~rr~~ 158 (572)
.-|..+..=|.-++..|+|++|...|..||.- ...| .+.|..+..+++.|.+....
T Consensus 11 ~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a~k~e~~~~~k~~l~~k~~eYl~RAE~Lk~ 75 (85)
T 2v6x_A 11 TKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLALKYEKNPKSKDLIRAKFTEYLNRAEQLKK 75 (85)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35778888889999999999999999999884 2223 34578888888888777643
No 83
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=61.69 E-value=23 Score=29.54 Aligned_cols=55 Identities=13% Similarity=0.227 Sum_probs=40.2
Q ss_pred hhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC-------CCCc--HHHHHHHHHHHHHHHHHH
Q 037115 102 TKRSLFYQANALYYEKMKKFEEAEKMYHLGVQN-------LAEP--ADELQKSYEQFLHRMERH 156 (572)
Q Consensus 102 tklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr-------~AqP--ldrLk~ay~qFq~Rm~rr 156 (572)
+.-|..+..=|..++..|+|++|...|..||.- ...| .+.|..+..+.+.|.+..
T Consensus 13 ~~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e~d~~~k~~lr~K~~eYl~RAE~L 76 (86)
T 4a5x_A 13 STAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAENI 76 (86)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 345778888999999999999999999999864 2233 234566666666665554
No 84
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=61.23 E-value=38 Score=31.10 Aligned_cols=29 Identities=10% Similarity=-0.038 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHC
Q 037115 106 LFYQANALYYEKMKKFEEAEKMYHLGVQN 134 (572)
Q Consensus 106 LFYEaWA~~LE~~g~fkeAdeIYqlGIqr 134 (572)
..|...|..|...|+|++|...|++++.-
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~kal~~ 225 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 67888899999999999999999999875
No 85
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=60.97 E-value=67 Score=31.71 Aligned_cols=84 Identities=11% Similarity=-0.020 Sum_probs=59.1
Q ss_pred HHHHHHHHHHhccc-------cccccchHHHHHHHHHhcCc------CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHc
Q 037115 52 PRFLQKCAQTFESD-------RRYRNDMRYLRIWLHLMDFV------DDPRVMLRTMEVNHIGTKRSLFYQANALYYEKM 118 (572)
Q Consensus 52 ~~LLERCtr~Fkdd-------ERYKND~RYLKIWLkYAd~~------dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~ 118 (572)
...++++++.+... +....++....+|..++... +.+...|..... +....+..|-..|..|...
T Consensus 243 i~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~--~~p~~~~a~~~lg~~~~~~ 320 (370)
T 1ihg_A 243 IKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALE--IDPSNTKALYRRAQGWQGL 320 (370)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--TCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH--hCchhHHHHHHHHHHHHHc
Confidence 45666776654332 12235677788888877642 345566666665 4556777888889999999
Q ss_pred cCHHHHHHHHHHHHHCCCC
Q 037115 119 KKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 119 g~fkeAdeIYqlGIqr~Aq 137 (572)
|+|++|...|+++++....
T Consensus 321 g~~~eA~~~l~~Al~l~P~ 339 (370)
T 1ihg_A 321 KEYDQALADLKKAQEIAPE 339 (370)
T ss_dssp TCHHHHHHHHHHHHHHCTT
T ss_pred cCHHHHHHHHHHHHHhCCC
Confidence 9999999999999987543
No 86
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=60.80 E-value=33 Score=28.26 Aligned_cols=53 Identities=17% Similarity=0.221 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHHC-----CCCc----HHHHHHHHHHHHHHHHHH
Q 037115 104 RSLFYQANALYYEKMKKFEEAEKMYHLGVQN-----LAEP----ADELQKSYEQFLHRMERH 156 (572)
Q Consensus 104 lALFYEaWA~~LE~~g~fkeAdeIYqlGIqr-----~AqP----ldrLk~ay~qFq~Rm~rr 156 (572)
-|.-+..=|.-+++.|+|++|...|+.||+- +.+| .+.|..+..+++.|.+..
T Consensus 10 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk~e~d~~~k~~ir~K~~eY~~RAE~L 71 (83)
T 2v6y_A 10 MARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIVLYPESVARTAYEQMINEYKKRISYL 71 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5666777888999999999999999999985 1122 334666666666655543
No 87
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=60.31 E-value=58 Score=30.74 Aligned_cols=76 Identities=12% Similarity=0.029 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhccccccccchHH-HHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRY-LRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEA 124 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RY-LKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeA 124 (572)
..++++++....+ ++.+ ..+|..++.. .+++..+|.-+.. +....+..|...|..+...|++++|
T Consensus 277 ~~~~~~~l~~~p~------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~--~~p~~~~~~~~l~~~~~~~~~~~~A 348 (450)
T 2y4t_A 277 TSKYESVMKTEPS------IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQ--MEPDNVNALKDRAEAYLIEEMYDEA 348 (450)
T ss_dssp HHHHHHHHHHCCS------SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHhcCCc------chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH--hCcccHHHHHHHHHHHHHhcCHHHH
Confidence 4556666654333 3222 3444444442 2345566666554 3456678888999999999999999
Q ss_pred HHHHHHHHHCC
Q 037115 125 EKMYHLGVQNL 135 (572)
Q Consensus 125 deIYqlGIqr~ 135 (572)
...|+..++..
T Consensus 349 ~~~~~~al~~~ 359 (450)
T 2y4t_A 349 IQDYETAQEHN 359 (450)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHHHhC
Confidence 99999999864
No 88
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=60.22 E-value=45 Score=32.99 Aligned_cols=116 Identities=7% Similarity=-0.074 Sum_probs=74.0
Q ss_pred hHhHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHhhCCCCcccCchHHHHHHHHHHhccccccccchHHHHHHHHHhc---
Q 037115 7 VYDTFFSSLIQDIKSYSGTDPLLPWLQGIKKMKDSLPSKLLKEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMD--- 83 (572)
Q Consensus 7 ~~~~~fssLes~I~sYsGDDPLdpWlrYIkWiEEsyPsGg~ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd--- 83 (572)
.+++..+-|...+... .+-...|...+.-.... +.-..-..++++++....++ ..+|...+.
T Consensus 388 ~~~~A~~~~~~~~~~~--~~~~~~~~~l~~~~~~~----g~~~~A~~~~~~~~~~~~~~---------~~~~~~l~~~~~ 452 (597)
T 2xpi_A 388 KISEARRYFSKSSTMD--PQFGPAWIGFAHSFAIE----GEHDQAISAYTTAARLFQGT---------HLPYLFLGMQHM 452 (597)
T ss_dssp CHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHH----TCHHHHHHHHHHHHHTTTTC---------SHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHhCccc---------hHHHHHHHHHHH
Confidence 3455556666666543 23355777766655442 22222356777777654322 223333333
Q ss_pred ---CcCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC----CCCcH
Q 037115 84 ---FVDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQN----LAEPA 139 (572)
Q Consensus 84 ---~~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr----~AqPl 139 (572)
..+++..+|.-+... ....+..|...+..+...|++++|.++|+..+.. .-.|.
T Consensus 453 ~~g~~~~A~~~~~~~~~~--~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~ 513 (597)
T 2xpi_A 453 QLGNILLANEYLQSSYAL--FQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEK 513 (597)
T ss_dssp HHTCHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSG
T ss_pred HcCCHHHHHHHHHHHHHh--CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchh
Confidence 245677888888764 4446677889999999999999999999999887 44665
No 89
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=58.34 E-value=44 Score=28.18 Aligned_cols=49 Identities=12% Similarity=-0.044 Sum_probs=38.4
Q ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCc
Q 037115 88 PRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEP 138 (572)
Q Consensus 88 P~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqP 138 (572)
....|.-... +.-..+..|..+|..+...|++++|...|+..++..-.+
T Consensus 93 a~~~~~~al~--~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 93 ELKRLEQELA--ANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHHHH--HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHHH--hCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 3556655554 445567788889999999999999999999999987544
No 90
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=57.08 E-value=72 Score=25.36 Aligned_cols=72 Identities=18% Similarity=0.129 Sum_probs=48.3
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
..++++++..... + ..+|+.++.. .+.+..+|..+... .......|..+|..+...|++++|.
T Consensus 96 ~~~~~~~~~~~~~------~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~la~~~~~~~~~~~A~ 164 (186)
T 3as5_A 96 VPLLIKVAEANPI------N---FNVRFRLGVALDNLGRFDEAIDSFKIALGL--RPNEGKVHRAIAFSYEQMGRHEEAL 164 (186)
T ss_dssp HHHHHHHHHHCTT------C---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHhcCcH------h---HHHHHHHHHHHHHcCcHHHHHHHHHHHHhc--CccchHHHHHHHHHHHHcCCHHHHH
Confidence 4566666665332 2 2344444432 23455666666554 3455788889999999999999999
Q ss_pred HHHHHHHHC
Q 037115 126 KMYHLGVQN 134 (572)
Q Consensus 126 eIYqlGIqr 134 (572)
..|+..+..
T Consensus 165 ~~~~~~~~~ 173 (186)
T 3as5_A 165 PHFKKANEL 173 (186)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHc
Confidence 999998764
No 91
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=56.71 E-value=42 Score=29.58 Aligned_cols=34 Identities=9% Similarity=0.085 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 104 RSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 104 lALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
++..+...|.++...|+|.+|...|+..|.....
T Consensus 146 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~ 179 (225)
T 2yhc_A 146 LAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPD 179 (225)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcC
Confidence 3444567788999999999999999999987644
No 92
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=56.31 E-value=22 Score=32.46 Aligned_cols=48 Identities=2% Similarity=0.009 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC
Q 037115 87 DPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQN 134 (572)
Q Consensus 87 DP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr 134 (572)
.+..+|..+....-....+..|...|..+...|++++|...|+..+..
T Consensus 199 ~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 246 (368)
T 1fch_A 199 EVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSV 246 (368)
T ss_dssp HHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 344444444432222114455555555666666666666666665554
No 93
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=56.10 E-value=23 Score=29.80 Aligned_cols=31 Identities=19% Similarity=0.273 Sum_probs=16.0
Q ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHHC
Q 037115 104 RSLFYQANALYYEKMKKFEEAEKMYHLGVQN 134 (572)
Q Consensus 104 lALFYEaWA~~LE~~g~fkeAdeIYqlGIqr 134 (572)
.+.+|...|..+...|+|++|...|+..+..
T Consensus 54 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 54 DSRFFLGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 3444444555555555555555555555543
No 94
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=55.81 E-value=43 Score=30.92 Aligned_cols=47 Identities=4% Similarity=0.023 Sum_probs=24.5
Q ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC
Q 037115 88 PRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQN 134 (572)
Q Consensus 88 P~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr 134 (572)
+..+|..+....-....+..|...+.++...|++.+|..+|+.++..
T Consensus 196 A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 242 (365)
T 4eqf_A 196 VKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTV 242 (365)
T ss_dssp HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 44444444443222224455555566666666666666666666654
No 95
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=55.73 E-value=24 Score=33.27 Aligned_cols=31 Identities=10% Similarity=-0.052 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 105 SLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 105 ALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
...|...+.+|...|++++|.+.|+..+...
T Consensus 130 ~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~ 160 (291)
T 3mkr_A 130 LECMAMTVQILLKLDRLDLARKELKKMQDQD 160 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC
Confidence 3344445555556666666666666655543
No 96
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=54.01 E-value=30 Score=34.94 Aligned_cols=114 Identities=11% Similarity=0.133 Sum_probs=0.0
Q ss_pred hhHhHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHhhCCCCc-ccCchHHHHHHHHHHhccccccccchHHHHHHHHHhcC
Q 037115 6 AVYDTFFSSLIQDIKSYSGTDPLLPWLQGIKKMKDSLPSKL-LKEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF 84 (572)
Q Consensus 6 ~~~~~~fssLes~I~sYsGDDPLdpWlrYIkWiEEsyPsGg-~ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~ 84 (572)
..........+..+......+|...+..|..=..-..-..- .+. ...+++++.. |+.+..+|...+..
T Consensus 78 ~~~~~~~~~al~~l~~~~~~~~~~a~~~~~lg~~~~~~g~~~~~A--~~~~~~al~~---------~p~~~~a~~~lg~~ 146 (474)
T 4abn_A 78 QDVQEEMEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEA--EVLLSKAVKL---------EPELVEAWNQLGEV 146 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTSSSSCCHHH--HHHHHHHHHH---------CTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhccccHHHH--HHHHHHHHhh---------CCCCHHHHHHHHHH
Q ss_pred ------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHc---------cCHHHHHHHHHHHHH
Q 037115 85 ------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKM---------KKFEEAEKMYHLGVQ 133 (572)
Q Consensus 85 ------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~---------g~fkeAdeIYqlGIq 133 (572)
...+...|.-.....=. +..|..+|..|... |+|++|.+.|+.++.
T Consensus 147 ~~~~g~~~~A~~~~~~al~~~p~---~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 207 (474)
T 4abn_A 147 YWKKGDVTSAHTCFSGALTHCKN---KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQ 207 (474)
T ss_dssp HHHHTCHHHHHHHHHHHHTTCCC---HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhhCCC---HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHH
No 97
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=53.13 E-value=84 Score=27.31 Aligned_cols=52 Identities=17% Similarity=-0.003 Sum_probs=40.4
Q ss_pred cCCHHHHHHHHHHCCcchhh-HHHHHHHHHHHHHccCHHHHHHHHHHHHHCCC
Q 037115 85 VDDPRVMLRTMEVNHIGTKR-SLFYQANALYYEKMKKFEEAEKMYHLGVQNLA 136 (572)
Q Consensus 85 ~dDP~dIF~fL~sngIGtkl-ALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~A 136 (572)
.+++...|..+....-.... +..|...|.++...|++++|...|+..+....
T Consensus 53 ~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~ 105 (272)
T 3u4t_A 53 YDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDT 105 (272)
T ss_dssp HHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCc
Confidence 45677788877774422233 66689999999999999999999999999643
No 98
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=52.75 E-value=69 Score=23.88 Aligned_cols=74 Identities=14% Similarity=0.038 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
..++++++....++ ..+|..++.. ...+...|..... +....+..|...|..+...|++++|.
T Consensus 32 ~~~~~~~~~~~~~~---------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~A~ 100 (131)
T 2vyi_A 32 VHFYGKAIELNPAN---------AVYFCNRAAAYSKLGNYAGAVQDCERAIC--IDPAYSKAYGRMGLALSSLNKHVEAV 100 (131)
T ss_dssp HHHHHHHHHHCTTC---------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHcCCCC---------HHHHHHHHHHHHHhhchHHHHHHHHHHHh--cCccCHHHHHHHHHHHHHhCCHHHHH
Confidence 45666666653222 3345444442 2345556665554 34556778888999999999999999
Q ss_pred HHHHHHHHCCC
Q 037115 126 KMYHLGVQNLA 136 (572)
Q Consensus 126 eIYqlGIqr~A 136 (572)
..|+.++....
T Consensus 101 ~~~~~~~~~~p 111 (131)
T 2vyi_A 101 AYYKKALELDP 111 (131)
T ss_dssp HHHHHHHHHST
T ss_pred HHHHHHHhcCc
Confidence 99999998754
No 99
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=52.31 E-value=77 Score=26.53 Aligned_cols=56 Identities=16% Similarity=0.242 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHHC-------CCCcH--HHHHHHHHHHHHHHHHHHhh
Q 037115 104 RSLFYQANALYYEKMKKFEEAEKMYHLGVQN-------LAEPA--DELQKSYEQFLHRMERHNKK 159 (572)
Q Consensus 104 lALFYEaWA~~LE~~g~fkeAdeIYqlGIqr-------~AqPl--drLk~ay~qFq~Rm~rr~~r 159 (572)
-|.-+..=|.-++..|+|++|...|..||.. ...|. +.|..+..+++.|.+.....
T Consensus 14 ~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e~~~~~k~~l~~K~~eYl~RAE~LK~~ 78 (93)
T 1wfd_A 14 AAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDRAENIKKY 78 (93)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667778888999999999999999988875 22333 44777888888888776443
No 100
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=51.27 E-value=41 Score=28.11 Aligned_cols=47 Identities=15% Similarity=0.114 Sum_probs=34.9
Q ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCC
Q 037115 88 PRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLA 136 (572)
Q Consensus 88 P~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~A 136 (572)
+...|.-... +--..+..|...|.++...|++++|...|+..|+-.-
T Consensus 50 A~~~~~~al~--~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p 96 (150)
T 4ga2_A 50 AKKYICTYIN--VQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNP 96 (150)
T ss_dssp HHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHH--hCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCC
Confidence 4444444333 4456677888889999999999999999999998653
No 101
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=50.54 E-value=75 Score=27.36 Aligned_cols=50 Identities=12% Similarity=0.095 Sum_probs=39.4
Q ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 86 DDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 86 dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
..+...|..... +....+..|...|..+...|++++|...|+.++...-.
T Consensus 59 ~~A~~~~~~al~--~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 108 (228)
T 4i17_A 59 KEAADYFDIAIK--KNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPG 108 (228)
T ss_dssp HHHHHHHHHHHH--TTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHH--hCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC
Confidence 345566666554 45557888889999999999999999999999986543
No 102
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=50.34 E-value=1.2e+02 Score=25.73 Aligned_cols=51 Identities=10% Similarity=0.112 Sum_probs=39.7
Q ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCc
Q 037115 86 DDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEP 138 (572)
Q Consensus 86 dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqP 138 (572)
..+..+|..+... ....+..|...|.++...|++.+|...|+..+......
T Consensus 176 ~~A~~~~~~~~~~--~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~ 226 (243)
T 2q7f_A 176 DEALSQFAAVTEQ--DPGHADAFYNAGVTYAYKENREKALEMLDKAIDIQPDH 226 (243)
T ss_dssp HHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHh--CcccHHHHHHHHHHHHHccCHHHHHHHHHHHHccCcch
Confidence 4566677666554 34567788899999999999999999999999876443
No 103
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=49.94 E-value=1.1e+02 Score=25.29 Aligned_cols=46 Identities=20% Similarity=0.119 Sum_probs=33.9
Q ss_pred CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC
Q 037115 87 DPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQN 134 (572)
Q Consensus 87 DP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr 134 (572)
.+...|+-... +.-..+..|...|..+...|++++|.+.|+++|+.
T Consensus 125 ~A~~~~~~~l~--~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 125 KAIEAYEKTIS--IKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp HHHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHH--hcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhC
Confidence 45555555443 44566777888888888899999999999888875
No 104
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=48.69 E-value=38 Score=24.78 Aligned_cols=49 Identities=10% Similarity=0.213 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 87 DPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 87 DP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
.+...|...... ....+..|...|..+...|+|++|...|+.++.....
T Consensus 24 ~A~~~~~~a~~~--~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 24 ESIDLFEKAIQL--DPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp HHHHHHHHHHHH--CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHh--CcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 344455544432 2334566778899999999999999999999998654
No 105
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=48.21 E-value=1e+02 Score=25.71 Aligned_cols=73 Identities=18% Similarity=0.016 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
..++++++.. |+....+|..++.. .+++...|....... -..+..|...|..+...|++++|.
T Consensus 41 ~~~~~~al~~---------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~--p~~~~~~~~lg~~~~~~g~~~~A~ 109 (148)
T 2vgx_A 41 HXVFQALCVL---------DHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMD--IXEPRFPFHAAECLLQXGELAEAE 109 (148)
T ss_dssp HHHHHHHHHH---------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--TTCTHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHc---------CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC--CCCchHHHHHHHHHHHcCCHHHHH
Confidence 4555555554 33334455555442 345667777766543 445566677788999999999999
Q ss_pred HHHHHHHHCC
Q 037115 126 KMYHLGVQNL 135 (572)
Q Consensus 126 eIYqlGIqr~ 135 (572)
..|+..+...
T Consensus 110 ~~~~~al~~~ 119 (148)
T 2vgx_A 110 SGLFLAQELI 119 (148)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHC
Confidence 9999999864
No 106
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=47.99 E-value=47 Score=29.08 Aligned_cols=81 Identities=6% Similarity=-0.083 Sum_probs=51.1
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC---cCC---HHHHHHHHHH----CCcchhhHHHHHHHHHHHHHccCH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF---VDD---PRVMLRTMEV----NHIGTKRSLFYQANALYYEKMKKF 121 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~---~dD---P~dIF~fL~s----ngIGtklALFYEaWA~~LE~~g~f 121 (572)
...+++++..+... .+......+|...+.. ..+ +...|..... .+-....+..|...|.++...|++
T Consensus 243 ~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 319 (338)
T 3ro2_A 243 SEYYKKTLLLARQL---KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNH 319 (338)
T ss_dssp HHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHhh---cchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCh
Confidence 46677777665543 3334445555555543 233 4444443322 222344567888999999999999
Q ss_pred HHHHHHHHHHHHCC
Q 037115 122 EEAEKMYHLGVQNL 135 (572)
Q Consensus 122 keAdeIYqlGIqr~ 135 (572)
++|...|+.++.-.
T Consensus 320 ~~A~~~~~~a~~~~ 333 (338)
T 3ro2_A 320 DQAMHFAEKHLEIS 333 (338)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998754
No 107
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=47.66 E-value=40 Score=26.48 Aligned_cols=53 Identities=11% Similarity=0.203 Sum_probs=40.6
Q ss_pred CCHHHHHHHHHHCCc-chhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCc
Q 037115 86 DDPRVMLRTMEVNHI-GTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEP 138 (572)
Q Consensus 86 dDP~dIF~fL~sngI-GtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqP 138 (572)
..+...|......+. -...+..|...|..+...|+|++|...|+.+++..-.-
T Consensus 7 ~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 60 (117)
T 3k9i_A 7 AQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH 60 (117)
T ss_dssp CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 455666666665321 15677888999999999999999999999999986443
No 108
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=46.78 E-value=47 Score=29.09 Aligned_cols=80 Identities=6% Similarity=-0.044 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC---cCC---HHHHHHHHH----HCCcchhhHHHHHHHHHHHHHccCH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF---VDD---PRVMLRTME----VNHIGTKRSLFYQANALYYEKMKKF 121 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~---~dD---P~dIF~fL~----sngIGtklALFYEaWA~~LE~~g~f 121 (572)
...+++++..+.. ..+......+|..++.. ..+ +..+|.-.. ..+-....+..|...|.++...|++
T Consensus 203 ~~~~~~a~~~~~~---~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 279 (338)
T 3ro2_A 203 VIAHEQRLLIAKE---FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDY 279 (338)
T ss_dssp HHHHHHHHHHHHH---HTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHh---cCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCH
Confidence 4566777666544 33445555566666653 233 344444332 2233334478888999999999999
Q ss_pred HHHHHHHHHHHHC
Q 037115 122 EEAEKMYHLGVQN 134 (572)
Q Consensus 122 keAdeIYqlGIqr 134 (572)
++|...|+.++..
T Consensus 280 ~~A~~~~~~a~~~ 292 (338)
T 3ro2_A 280 EKAIDYHLKHLAI 292 (338)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998875
No 109
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=46.61 E-value=48 Score=27.39 Aligned_cols=49 Identities=12% Similarity=0.097 Sum_probs=37.3
Q ss_pred CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 87 DPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 87 DP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
.+...|..... +....+..|...|..+...|+|++|...|+..|.....
T Consensus 29 ~A~~~~~~al~--~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 77 (164)
T 3sz7_A 29 KAIDLYTQALS--IAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK 77 (164)
T ss_dssp HHHHHHHHHHH--HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHH--hCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 34445544443 33456788999999999999999999999999997644
No 110
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=46.56 E-value=2e+02 Score=27.45 Aligned_cols=84 Identities=11% Similarity=-0.013 Sum_probs=55.2
Q ss_pred HHHHHHHHHHhccccccc------cchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcc
Q 037115 52 PRFLQKCAQTFESDRRYR------NDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMK 119 (572)
Q Consensus 52 ~~LLERCtr~FkddERYK------ND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g 119 (572)
...+++++....+...+. .++....+|+.++.+ ..++...|.-... +....+..|-..|..|...|
T Consensus 167 ~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~--~~p~~~~a~~~lg~~~~~~g 244 (336)
T 1p5q_A 167 LLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALE--LDSNNEKGLSRRGEAHLAVN 244 (336)
T ss_dssp HHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCCcHHHHHHHHHHHHHCC
Confidence 456677776654442111 123335666666653 2345556655554 44566778888899999999
Q ss_pred CHHHHHHHHHHHHHCCCC
Q 037115 120 KFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 120 ~fkeAdeIYqlGIqr~Aq 137 (572)
+|++|...|+++++....
T Consensus 245 ~~~~A~~~~~~al~l~P~ 262 (336)
T 1p5q_A 245 DFELARADFQKVLQLYPN 262 (336)
T ss_dssp CHHHHHHHHHHHHHHCSS
T ss_pred CHHHHHHHHHHHHHHCCC
Confidence 999999999999987543
No 111
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=46.09 E-value=1.6e+02 Score=26.07 Aligned_cols=127 Identities=17% Similarity=0.093 Sum_probs=65.1
Q ss_pred hHhHHHHHHHHHhhcCCCCCCcHHHHHH---HHHHHhhCCC----CcccCchHHHHHHHHHHhccccccccchH------
Q 037115 7 VYDTFFSSLIQDIKSYSGTDPLLPWLQG---IKKMKDSLPS----KLLKEKLPRFLQKCAQTFESDRRYRNDMR------ 73 (572)
Q Consensus 7 ~~~~~fssLes~I~sYsGDDPLdpWlrY---IkWiEEsyPs----Gg~ks~L~~LLERCtr~FkddERYKND~R------ 73 (572)
.++++...|...|..+.. +|..++..| ..+.. ..+. .+.-..-...+++++..+.++.... +.+
T Consensus 67 ~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~-~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~-~a~~~~~~~ 143 (261)
T 3qky_A 67 EYLLAASEYERFIQIYQI-DPRVPQAEYERAMCYYK-LSPPYELDQTDTRKAIEAFQLFIDRYPNHELVD-DATQKIREL 143 (261)
T ss_dssp CHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHH-HCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHH-HHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHCCC-CchhHHHHHHHHHHHHH-hcccccccchhHHHHHHHHHHHHHHCcCchhHH-HHHHHHHHH
Confidence 355666777777777642 344333221 12221 1110 1111223567777777766553322 111
Q ss_pred --------HHHHHHHHhc-CcCCHHHHHHHHHHCCcch---hhHHHHHHHHHHHH--------HccCHHHHHHHHHHHHH
Q 037115 74 --------YLRIWLHLMD-FVDDPRVMLRTMEVNHIGT---KRSLFYQANALYYE--------KMKKFEEAEKMYHLGVQ 133 (572)
Q Consensus 74 --------YLKIWLkYAd-~~dDP~dIF~fL~sngIGt---klALFYEaWA~~LE--------~~g~fkeAdeIYqlGIq 133 (572)
|..-++.+.. ....+...|..+....=.. .-++|+.+.+.+-- ..|++++|...|+..+.
T Consensus 144 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~ 223 (261)
T 3qky_A 144 RAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQ 223 (261)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHH
Confidence 2222221111 2346778888877654442 23444444333322 34999999999999998
Q ss_pred CCC
Q 037115 134 NLA 136 (572)
Q Consensus 134 r~A 136 (572)
...
T Consensus 224 ~~p 226 (261)
T 3qky_A 224 IFP 226 (261)
T ss_dssp HCT
T ss_pred HCC
Confidence 753
No 112
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=45.75 E-value=82 Score=25.07 Aligned_cols=36 Identities=3% Similarity=-0.161 Sum_probs=32.7
Q ss_pred cchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 100 IGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 100 IGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
.|...+..|..+|..+.+.|++++|...|+..+.-.
T Consensus 41 ~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~ 76 (104)
T 2v5f_A 41 STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD 76 (104)
T ss_dssp CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred CcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC
Confidence 477888999999999999999999999999999754
No 113
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=44.91 E-value=38 Score=34.62 Aligned_cols=73 Identities=12% Similarity=-0.082 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
...+++++.. ++....+|..++.. ..++...|...... ....+..|...|..|...|+|++|.
T Consensus 26 ~~~~~~Al~~---------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l--~p~~~~~~~~lg~~~~~~g~~~eA~ 94 (477)
T 1wao_1 26 IKFYSQAIEL---------NPSNAIYYGNRSLAYLRTECYGYALGDATRAIEL--DKKYIKGYYRRAASNMALGKFRAAL 94 (477)
T ss_dssp HHHHHHHHHH---------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS--CTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHh---------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHH
Confidence 4555555554 22234555555542 33456666666554 4566777888899999999999999
Q ss_pred HHHHHHHHCC
Q 037115 126 KMYHLGVQNL 135 (572)
Q Consensus 126 eIYqlGIqr~ 135 (572)
+.|+++++..
T Consensus 95 ~~~~~al~~~ 104 (477)
T 1wao_1 95 RDYETVVKVK 104 (477)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHhC
Confidence 9999999864
No 114
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=44.85 E-value=1.9e+02 Score=26.60 Aligned_cols=114 Identities=5% Similarity=-0.152 Sum_probs=62.7
Q ss_pred hHhHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHhhCCCCcccCchHHHHHHHHHHhccccccccchHHHHHHHHHhcC--
Q 037115 7 VYDTFFSSLIQDIKSYSGTDPLLPWLQGIKKMKDSLPSKLLKEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF-- 84 (572)
Q Consensus 7 ~~~~~fssLes~I~sYsGDDPLdpWlrYIkWiEEsyPsGg~ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~-- 84 (572)
.+++..+.+...+......--...|.......... +.-..-..++++++....+ ...+|..++..
T Consensus 192 ~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~----g~~~~A~~~~~~al~~~p~---------~~~~~~~l~~~~~ 258 (365)
T 4eqf_A 192 VLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLS----GEFNRAIDAFNAALTVRPE---------DYSLWNRLGATLA 258 (365)
T ss_dssp HHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHH----TCHHHHHHHHHHHHHHCTT---------CHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHC----CCHHHHHHHHHHHHHhCCC---------CHHHHHHHHHHHH
Confidence 34555556666666542211223444433322221 1111224566666655322 23455555543
Q ss_pred ----cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 85 ----VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 85 ----~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
...+...|...... ....+..|...|..+...|++++|...|+..+...
T Consensus 259 ~~g~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 311 (365)
T 4eqf_A 259 NGDRSEEAVEAYTRALEI--QPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQ 311 (365)
T ss_dssp HTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhc--CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 23455666665543 44557778888888888899999999998888753
No 115
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=44.53 E-value=1.2e+02 Score=30.53 Aligned_cols=112 Identities=12% Similarity=0.038 Sum_probs=69.3
Q ss_pred HHHHHHHHHhhcCCCCCCcH-----HHHH-HHHHHHhhCCCCcccCchHHHHHHHHHHhccccccccchHHHHHHHHHhc
Q 037115 10 TFFSSLIQDIKSYSGTDPLL-----PWLQ-GIKKMKDSLPSKLLKEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMD 83 (572)
Q Consensus 10 ~~fssLes~I~sYsGDDPLd-----pWlr-YIkWiEEsyPsGg~ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd 83 (572)
...+.|..++.-|.| +||. .|.. +..|+++.| ..++++++.......+|..=+.+|+-++..--
T Consensus 133 ~a~~~l~~Al~L~rG-~~L~~~~~~~w~~~~r~~l~~~~---------~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P 202 (388)
T 2ff4_A 133 QASRHLSAALREWRG-PVLDDLRDFQFVEPFATALVEDK---------VLAHTAKAEAEIACGRASAVIAELEALTFEHP 202 (388)
T ss_dssp HHHHHHHHHHTTCCS-STTGGGTTSTTHHHHHHHHHHHH---------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHhcCC-CCCCCCCchhHHHHHHHHHHHHH---------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC
Confidence 344667888888976 3554 3432 233444333 45566666555555555544444444432211
Q ss_pred CcCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC-----CCCcHHHHHHHHHHHH
Q 037115 84 FVDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQN-----LAEPADELQKSYEQFL 150 (572)
Q Consensus 84 ~~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr-----~AqPldrLk~ay~qFq 150 (572)
+- =.+|...-..|...|+..+|.++|+.-.+. +.+|-..|++-|+..+
T Consensus 203 ~~-------------------E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l~~l~~~il 255 (388)
T 2ff4_A 203 YR-------------------EPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALNERIL 255 (388)
T ss_dssp TC-------------------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHH
T ss_pred CC-------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 11 124555666778899999999999987665 7899999998887765
No 116
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=44.28 E-value=15 Score=31.04 Aligned_cols=74 Identities=7% Similarity=0.010 Sum_probs=51.3
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
...+++++.. +|....+|+.++.. .+++...|..+....=...-+..|...+.++...|++.+|.
T Consensus 94 ~~~~~~al~~---------~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~ 164 (176)
T 2r5s_A 94 LKRLEQELAA---------NPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIA 164 (176)
T ss_dssp HHHHHHHHHH---------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHH
T ss_pred HHHHHHHHHh---------CCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHH
Confidence 4566776664 33345566665553 34566777777766544444556778899999999999999
Q ss_pred HHHHHHHHC
Q 037115 126 KMYHLGVQN 134 (572)
Q Consensus 126 eIYqlGIqr 134 (572)
..|+..|.+
T Consensus 165 ~~y~~al~~ 173 (176)
T 2r5s_A 165 SKYRRQLYS 173 (176)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988753
No 117
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=44.15 E-value=1.1e+02 Score=26.48 Aligned_cols=84 Identities=11% Similarity=0.062 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
...+++++.. ||.+..+|...+.. .+++...|...... .-..+..|-..|..|...|++++|.
T Consensus 56 ~~~~~~al~~---------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l--~P~~~~~~~~lg~~~~~lg~~~eA~ 124 (151)
T 3gyz_A 56 EVFFRFLCIY---------DFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFAL--GKNDYTPVFHTGQCQLRLKAPLKAK 124 (151)
T ss_dssp HHHHHHHHHH---------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--SSSCCHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHh---------CCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhh--CCCCcHHHHHHHHHHHHcCCHHHHH
Confidence 4555555554 44455567665543 34566677666654 4455666778889999999999999
Q ss_pred HHHHHHHHCCCCcHHHHHHHHHH
Q 037115 126 KMYHLGVQNLAEPADELQKSYEQ 148 (572)
Q Consensus 126 eIYqlGIqr~AqPldrLk~ay~q 148 (572)
..|+..+.....+ .+.++-+.
T Consensus 125 ~~~~~al~l~~~~--~~~~~A~~ 145 (151)
T 3gyz_A 125 ECFELVIQHSNDE--KLKIKAQS 145 (151)
T ss_dssp HHHHHHHHHCCCH--HHHHHHHH
T ss_pred HHHHHHHHhCCCH--HHHHHHHH
Confidence 9999999986443 34444433
No 118
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=43.71 E-value=2e+02 Score=27.74 Aligned_cols=47 Identities=6% Similarity=0.070 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 87 DPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 87 DP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
.+..+|..+.. +....+..|...|.++...|++++|...|+..+...
T Consensus 294 ~A~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 340 (537)
T 3fp2_A 294 EFFKFFQKAVD--LNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLN 340 (537)
T ss_dssp HHHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhc--cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC
Confidence 35556655543 445567778888888888899999999888888754
No 119
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=43.62 E-value=57 Score=26.35 Aligned_cols=72 Identities=11% Similarity=-0.016 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
...++++++. |+.....|..++.. ...+...|..... +.-..+..|...|..+...|++++|.
T Consensus 37 ~~~~~~al~~---------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~--l~P~~~~~~~~la~~~~~~g~~~~A~ 105 (121)
T 1hxi_A 37 ALAFEAVCQK---------EPEREEAWRSLGLTQAENEKDGLAIIALNHARM--LDPKDIAVHAALAVSHTNEHNANAAL 105 (121)
T ss_dssp HHHHHHHHHH---------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH---------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHcCCHHHHH
Confidence 4556666654 33334455554442 1234444444333 34445666777777788888888888
Q ss_pred HHHHHHHHC
Q 037115 126 KMYHLGVQN 134 (572)
Q Consensus 126 eIYqlGIqr 134 (572)
..|+..++.
T Consensus 106 ~~~~~al~~ 114 (121)
T 1hxi_A 106 ASLRAWLLS 114 (121)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHHh
Confidence 888877764
No 120
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=43.35 E-value=63 Score=24.94 Aligned_cols=37 Identities=14% Similarity=0.074 Sum_probs=30.4
Q ss_pred hhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCc
Q 037115 102 TKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEP 138 (572)
Q Consensus 102 tklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqP 138 (572)
...+..|...|..+...|+|++|...|+..+.....-
T Consensus 16 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 52 (115)
T 2kat_A 16 TDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY 52 (115)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc
Confidence 3455677788899999999999999999999876443
No 121
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.08 E-value=42 Score=30.17 Aligned_cols=55 Identities=20% Similarity=0.334 Sum_probs=41.3
Q ss_pred chhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC----------CCCcHHHHHHHHHHHHHHHHH
Q 037115 101 GTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQN----------LAEPADELQKSYEQFLHRMER 155 (572)
Q Consensus 101 GtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr----------~AqPldrLk~ay~qFq~Rm~r 155 (572)
+++-|.=|+.=|.-++..|+-.+|.+.|+.||.. ..+....-..+-++.+.+|.+
T Consensus 18 ~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~ 82 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKE 82 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHH
Confidence 4566778899999999999999999999999985 223444555666666666655
No 122
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=42.63 E-value=68 Score=24.93 Aligned_cols=37 Identities=22% Similarity=0.257 Sum_probs=31.2
Q ss_pred chhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 101 GTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 101 GtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
....+.+|...|..+...|+|.+|...|+.++.....
T Consensus 39 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 75 (137)
T 3q49_B 39 NPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ 75 (137)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred CcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCch
Confidence 3455778888999999999999999999999986533
No 123
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=42.49 E-value=2.1e+02 Score=28.96 Aligned_cols=49 Identities=2% Similarity=-0.017 Sum_probs=32.6
Q ss_pred CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHc---cCHHHHHHHHHHHHHCCCC
Q 037115 87 DPRVMLRTMEVNHIGTKRSLFYQANALYYEKM---KKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 87 DP~dIF~fL~sngIGtklALFYEaWA~~LE~~---g~fkeAdeIYqlGIqr~Aq 137 (572)
++...|..... +....+..|..+|..+... |++++|.+.|+.++.....
T Consensus 109 ~A~~~~~~al~--~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~ 160 (568)
T 2vsy_A 109 AAAAAYTRAHQ--LLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVG 160 (568)
T ss_dssp HHHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHH--hCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCc
Confidence 44455555443 3345566677777778887 8888888888888876544
No 124
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=41.98 E-value=1.5e+02 Score=24.49 Aligned_cols=51 Identities=8% Similarity=-0.035 Sum_probs=39.3
Q ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCc
Q 037115 86 DDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEP 138 (572)
Q Consensus 86 dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqP 138 (572)
+.+..+|..+... .......|...|.++...|++++|...|+..+...-..
T Consensus 98 ~~A~~~~~~al~~--~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 148 (177)
T 2e2e_A 98 AQTRAMIDKALAL--DSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPR 148 (177)
T ss_dssp HHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC
Confidence 4455666666554 44556778889999999999999999999999986543
No 125
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=41.79 E-value=1.1e+02 Score=26.65 Aligned_cols=50 Identities=16% Similarity=0.056 Sum_probs=38.5
Q ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 86 DDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 86 dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
+.+...|.-... +.-..+..|...|..+...|++++|...|+..|+..-.
T Consensus 71 ~~A~~~~~~al~--~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~ 120 (208)
T 3urz_A 71 DKAYLFYKELLQ--KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEAD 120 (208)
T ss_dssp HHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHH--HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 345566655544 45567788889999999999999999999999987543
No 126
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=41.44 E-value=79 Score=23.17 Aligned_cols=36 Identities=14% Similarity=0.177 Sum_probs=30.1
Q ss_pred hhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 102 TKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 102 tklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
...+..|...|..+...|++.+|...|+.++.....
T Consensus 35 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 70 (118)
T 1elw_A 35 PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD 70 (118)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc
Confidence 345677888899999999999999999999987543
No 127
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=40.14 E-value=1.1e+02 Score=29.07 Aligned_cols=80 Identities=9% Similarity=0.056 Sum_probs=50.8
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHH----CCcchhhHHHHHHHHHHHHHccCH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEV----NHIGTKRSLFYQANALYYEKMKKF 121 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~s----ngIGtklALFYEaWA~~LE~~g~f 121 (572)
...+++++..|.....| +++...+|...+.. .+.+.+.|.-... .+--...+..|...|.++...|++
T Consensus 161 ~~~~~~al~~~~~~~~~--~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~ 238 (378)
T 3q15_A 161 MYHILQALDIYQNHPLY--SIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDD 238 (378)
T ss_dssp HHHHHHHHHHHHTSTTC--HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHhCCCc--hhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCH
Confidence 46677777777655433 23455555555543 2234444444322 222234667788888899999999
Q ss_pred HHHHHHHHHHHH
Q 037115 122 EEAEKMYHLGVQ 133 (572)
Q Consensus 122 keAdeIYqlGIq 133 (572)
++|...|+.++.
T Consensus 239 ~~A~~~~~~al~ 250 (378)
T 3q15_A 239 QMAVEHFQKAAK 250 (378)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999987
No 128
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=40.09 E-value=82 Score=23.58 Aligned_cols=34 Identities=6% Similarity=0.143 Sum_probs=28.6
Q ss_pred hhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 102 TKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 102 tklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
...+..|...|..+...|+|++|...|+.++...
T Consensus 35 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 68 (131)
T 1elr_A 35 PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVG 68 (131)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhc
Confidence 3456778888999999999999999999998863
No 129
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=40.07 E-value=1.3e+02 Score=27.82 Aligned_cols=45 Identities=9% Similarity=-0.091 Sum_probs=34.2
Q ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC
Q 037115 88 PRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQN 134 (572)
Q Consensus 88 P~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr 134 (572)
+...|... ..+....+..|...|..+...|+|++|...|+.++..
T Consensus 57 A~~~~~~a--l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 101 (281)
T 2c2l_A 57 ALADCRRA--LELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSL 101 (281)
T ss_dssp HHHHHHHH--TTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH--HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 44444443 4455666777778889999999999999999999875
No 130
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=39.96 E-value=2.2e+02 Score=25.89 Aligned_cols=47 Identities=6% Similarity=-0.075 Sum_probs=32.9
Q ss_pred CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 87 DPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 87 DP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
.+...|.-+.. +....+..|...|..+...|++++|...|+..+...
T Consensus 269 ~A~~~~~~al~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 315 (368)
T 1fch_A 269 EAVAAYRRALE--LQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQ 315 (368)
T ss_dssp HHHHHHHHHHH--HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--hCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 45555655544 344566777788888888888888888888887653
No 131
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=39.51 E-value=2.8e+02 Score=27.82 Aligned_cols=82 Identities=11% Similarity=-0.061 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhcccccc------ccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcc
Q 037115 52 PRFLQKCAQTFESDRRY------RNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMK 119 (572)
Q Consensus 52 ~~LLERCtr~FkddERY------KND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g 119 (572)
...+++++....+.... ..+...+.+|+.++.+ ...+...|...... -...+..|-..|..|...|
T Consensus 288 ~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~--~p~~~~a~~~~g~a~~~~g 365 (457)
T 1kt0_A 288 VIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGL--DSANEKGLYRRGEAQLLMN 365 (457)
T ss_dssp HHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--CCccHHHHHHHHHHHHHcc
Confidence 45666666655443211 1122335566655553 23455666665543 3455666777888899999
Q ss_pred CHHHHHHHHHHHHHCC
Q 037115 120 KFEEAEKMYHLGVQNL 135 (572)
Q Consensus 120 ~fkeAdeIYqlGIqr~ 135 (572)
+|++|...|++.++..
T Consensus 366 ~~~~A~~~~~~al~l~ 381 (457)
T 1kt0_A 366 EFESAKGDFEKVLEVN 381 (457)
T ss_dssp CHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhC
Confidence 9999999999999864
No 132
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=38.83 E-value=36 Score=28.43 Aligned_cols=73 Identities=10% Similarity=-0.002 Sum_probs=49.6
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
...+++++.. |+.+..+|..++.. .+.+...|+... .|.-..+..|...|.++...|++.+|.
T Consensus 51 ~~~~~~al~~---------~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al--~~~p~~~~~~~~la~~~~~~~~~~~aa 119 (150)
T 4ga2_A 51 KKYICTYINV---------QERDPKAHRFLGLLYELEENTDKAVECYRRSV--ELNPTQKDLVLKIAELLCKNDVTDGRA 119 (150)
T ss_dssp HHHHHHHHHH---------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH--HHCTTCHHHHHHHHHHHHHHCSSSSHH
T ss_pred HHHHHHHHHh---------CCCCHHHHHHHHHHHHHcCchHHHHHHHHHHH--HhCCCCHHHHHHHHHHHHHcCChHHHH
Confidence 4566666655 34455667666653 223445555544 466677888999999999999998877
Q ss_pred HH-HHHHHHCC
Q 037115 126 KM-YHLGVQNL 135 (572)
Q Consensus 126 eI-YqlGIqr~ 135 (572)
+. ++++++-.
T Consensus 120 ~~~~~~al~l~ 130 (150)
T 4ga2_A 120 KYWVERAAKLF 130 (150)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHhC
Confidence 66 48888753
No 133
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=38.68 E-value=82 Score=28.88 Aligned_cols=80 Identities=5% Similarity=-0.091 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC---cC---CHHHHHHHHHH----CCcchhhHHHHHHHHHHHHHccCH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF---VD---DPRVMLRTMEV----NHIGTKRSLFYQANALYYEKMKKF 121 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~---~d---DP~dIF~fL~s----ngIGtklALFYEaWA~~LE~~g~f 121 (572)
...+++++..+... .+......+|...+.. .. .+...|..... .+--...+..|...|.++...|++
T Consensus 247 ~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 323 (406)
T 3sf4_A 247 SEYYKKTLLLARQL---KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNH 323 (406)
T ss_dssp HHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHhC---cCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCH
Confidence 56777777666543 3344445566666653 23 34444444322 222334477888999999999999
Q ss_pred HHHHHHHHHHHHC
Q 037115 122 EEAEKMYHLGVQN 134 (572)
Q Consensus 122 keAdeIYqlGIqr 134 (572)
++|...|+..+.-
T Consensus 324 ~~A~~~~~~al~~ 336 (406)
T 3sf4_A 324 DQAMHFAEKHLEI 336 (406)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998875
No 134
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=37.55 E-value=77 Score=29.60 Aligned_cols=81 Identities=6% Similarity=-0.191 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC---cC---CHHHHHHHHHH----CCcchhhHHHHHHHHHHHHHccCH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF---VD---DPRVMLRTMEV----NHIGTKRSLFYQANALYYEKMKKF 121 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~---~d---DP~dIF~fL~s----ngIGtklALFYEaWA~~LE~~g~f 121 (572)
...+++++..+... .+......+|..++.. .. .+...|..... .+--...+..|..+|.++...|++
T Consensus 283 ~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 359 (411)
T 4a1s_A 283 AEHYKRTLALAVEL---GEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGH 359 (411)
T ss_dssp HHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccH
Confidence 34555555554432 3333344555555553 22 34444443322 122345577999999999999999
Q ss_pred HHHHHHHHHHHHCC
Q 037115 122 EEAEKMYHLGVQNL 135 (572)
Q Consensus 122 keAdeIYqlGIqr~ 135 (572)
++|...|+..+.-.
T Consensus 360 ~~A~~~~~~al~~~ 373 (411)
T 4a1s_A 360 ERALKYAEQHLQLA 373 (411)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988765
No 135
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=37.43 E-value=1.5e+02 Score=24.90 Aligned_cols=47 Identities=13% Similarity=0.143 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 87 DPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 87 DP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
.+...|..... +....+..|...|..+...|+|++|.+.|+..+...
T Consensus 55 ~A~~~~~~al~--~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 101 (213)
T 1hh8_A 55 EAEKAFTRSIN--RDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQL 101 (213)
T ss_dssp HHHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH--hCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 45555555444 345677888889999999999999999999999854
No 136
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=37.21 E-value=1.1e+02 Score=21.79 Aligned_cols=47 Identities=11% Similarity=0.029 Sum_probs=33.6
Q ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCC
Q 037115 88 PRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLA 136 (572)
Q Consensus 88 P~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~A 136 (572)
+...|...... ....+..|...|..+...|++++|...|+..+....
T Consensus 28 A~~~~~~a~~~--~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p 74 (91)
T 1na3_A 28 AIEYYQKALEL--DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 74 (91)
T ss_dssp HHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhc--CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 34444444332 334456677888899999999999999999998653
No 137
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=37.15 E-value=88 Score=28.65 Aligned_cols=80 Identities=6% Similarity=-0.096 Sum_probs=51.4
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC---cC---CHHHHHHHHH----HCCcchhhHHHHHHHHHHHHHccCH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF---VD---DPRVMLRTME----VNHIGTKRSLFYQANALYYEKMKKF 121 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~---~d---DP~dIF~fL~----sngIGtklALFYEaWA~~LE~~g~f 121 (572)
...+++++..+... .+......+|..++.. .. .+...|.... ..+--...+..|...|.++...|++
T Consensus 207 ~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 283 (406)
T 3sf4_A 207 VIAHEQRLLIAKEF---GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDY 283 (406)
T ss_dssp HHHHHHHHHHHHHT---TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHhc---CCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHhCcH
Confidence 56777777766553 3344444555555543 23 3444444332 2222233477888999999999999
Q ss_pred HHHHHHHHHHHHC
Q 037115 122 EEAEKMYHLGVQN 134 (572)
Q Consensus 122 keAdeIYqlGIqr 134 (572)
++|...|+.++.-
T Consensus 284 ~~A~~~~~~a~~~ 296 (406)
T 3sf4_A 284 EKAIDYHLKHLAI 296 (406)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999874
No 138
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=36.15 E-value=1.2e+02 Score=21.69 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 104 RSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 104 lALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
.+..|...|..+...|+|.+|...|+..+.....
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~ 41 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN 41 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC
Confidence 4556777888999999999999999999987543
No 139
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=36.05 E-value=1.1e+02 Score=29.27 Aligned_cols=47 Identities=13% Similarity=0.156 Sum_probs=25.9
Q ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC
Q 037115 86 DDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQN 134 (572)
Q Consensus 86 dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr 134 (572)
..+...|..+... ....+..|...|..+...|++++|..+|+..+..
T Consensus 321 ~~A~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 367 (514)
T 2gw1_A 321 DQAGKDFDKAKEL--DPENIFPYIQLACLAYRENKFDDCETLFSEAKRK 367 (514)
T ss_dssp THHHHHHHHHHHT--CSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh--ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3455555554443 2233445555566666666666666666666654
No 140
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=35.64 E-value=1.2e+02 Score=28.22 Aligned_cols=80 Identities=8% Similarity=0.051 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcCc--CC---HHHHHHHHHH--CCcc--hhhHHHHHHHHHHHHHccCHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDFV--DD---PRVMLRTMEV--NHIG--TKRSLFYQANALYYEKMKKFE 122 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~~--dD---P~dIF~fL~s--ngIG--tklALFYEaWA~~LE~~g~fk 122 (572)
...+++++..+..... .......|...+... .+ +...|.-... ...| ...+..|...|.++...|+|.
T Consensus 96 ~~~~~~Al~l~~~~g~---~~~~a~~~~~lg~~~~~g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 172 (307)
T 2ifu_A 96 VQYIEKASVMYVENGT---PDTAAMALDRAGKLMEPLDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFD 172 (307)
T ss_dssp HHHHHHHHHHHHTTTC---HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHH
Confidence 5677777776654322 223344444444322 33 2333433221 1122 234678888999999999999
Q ss_pred HHHHHHHHHHHC
Q 037115 123 EAEKMYHLGVQN 134 (572)
Q Consensus 123 eAdeIYqlGIqr 134 (572)
+|...|+..+..
T Consensus 173 ~A~~~~~~al~~ 184 (307)
T 2ifu_A 173 EAAASLQKEKSM 184 (307)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999874
No 141
>2dwk_A Protein RUFY3; RUN domain, effector, RAP2, bundle, protein binding, structural genomics, NPPSFA; 2.00A {Mus musculus} PDB: 2dwg_A 2cxf_A 2cxl_A
Probab=35.41 E-value=9.7 Score=35.43 Aligned_cols=58 Identities=19% Similarity=0.253 Sum_probs=44.6
Q ss_pred HHHHHhccccccccchHHHHHHHHHhcCcCCHHHHHHHHHHCCcchhhHHHHHHHHHHHH
Q 037115 57 KCAQTFESDRRYRNDMRYLRIWLHLMDFVDDPRVMLRTMEVNHIGTKRSLFYQANALYYE 116 (572)
Q Consensus 57 RCtr~FkddERYKND~RYLKIWLkYAd~~dDP~dIF~fL~sngIGtklALFYEaWA~~LE 116 (572)
.+++.++..+.-+.|.=-.|.||.+|=...-=...++.|.++. .-+..||+.||.++.
T Consensus 88 ~~~~~v~~l~~i~T~~Gr~RawIR~aL~ek~L~~~l~~l~~~~--~~l~~~Y~~~All~~ 145 (180)
T 2dwk_A 88 EITASVKDLPGLKTPVGRGRAWLRLALMQKKLSEYMKALINKK--ELLSEFYEVNALMME 145 (180)
T ss_dssp HHHHHHHTCTTCCSHHHHHHHHHHHHHHHTCHHHHHHHHHTCH--HHHTTTBCTTSGGGS
T ss_pred HHHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHHHHHhCh--HHHHhhCCCCccccC
Confidence 4556677777788888888999999976666566777777763 457889999999754
No 142
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=34.69 E-value=67 Score=30.31 Aligned_cols=49 Identities=10% Similarity=0.004 Sum_probs=36.6
Q ss_pred CCHHHHHHHHHHC----CcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC
Q 037115 86 DDPRVMLRTMEVN----HIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQN 134 (572)
Q Consensus 86 dDP~dIF~fL~sn----gIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr 134 (572)
+.+...|...... +=-...+.+|...|.++...|++.+|...|+.++.-
T Consensus 120 ~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 172 (383)
T 3ulq_A 120 LSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEI 172 (383)
T ss_dssp HHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3455566555442 223347888999999999999999999999999874
No 143
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=34.22 E-value=1.7e+02 Score=23.06 Aligned_cols=71 Identities=11% Similarity=-0.065 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
...+++++....+ ...+|+.++.. .+.+...|.......-....+.++...+..+...|++++|.
T Consensus 67 ~~~~~~a~~~~~~---------~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~ 137 (166)
T 1a17_A 67 LGDATRAIELDKK---------YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAI 137 (166)
T ss_dssp HHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcc---------cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666665322 23455555542 34566777777766555555666677777788889999998
Q ss_pred HHHHHH
Q 037115 126 KMYHLG 131 (572)
Q Consensus 126 eIYqlG 131 (572)
+.|...
T Consensus 138 ~~~~~~ 143 (166)
T 1a17_A 138 AGDEHK 143 (166)
T ss_dssp HHHHHH
T ss_pred Hcccch
Confidence 888764
No 144
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=33.76 E-value=1.9e+02 Score=23.35 Aligned_cols=35 Identities=11% Similarity=0.224 Sum_probs=28.9
Q ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCc
Q 037115 104 RSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEP 138 (572)
Q Consensus 104 lALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqP 138 (572)
++.-|...+..++..|+|++|.+.|++++...-.|
T Consensus 82 ~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 116 (127)
T 4gcn_A 82 IAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDP 116 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCH
Confidence 45667778889999999999999999999865444
No 145
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=33.52 E-value=1.3e+02 Score=23.39 Aligned_cols=48 Identities=15% Similarity=0.060 Sum_probs=35.2
Q ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 88 PRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 88 P~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
+...|.-... +....+..|...|..+...|+|++|...|+..+...-.
T Consensus 23 A~~~~~~al~--~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~ 70 (126)
T 3upv_A 23 AVKAYTEMIK--RAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN 70 (126)
T ss_dssp HHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHH--hCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 3344443333 23445678888999999999999999999999987543
No 146
>2pm7_A Protein WEB1, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm6_A 3mzl_B
Probab=33.23 E-value=47 Score=34.62 Aligned_cols=102 Identities=13% Similarity=0.159 Sum_probs=61.9
Q ss_pred CcHHHHHHHHHHHhhCCCCcccCchHHHHHHHHHHhcccccc----------ccchHHHHHHHH-HhcCc----------
Q 037115 27 PLLPWLQGIKKMKDSLPSKLLKEKLPRFLQKCAQTFESDRRY----------RNDMRYLRIWLH-LMDFV---------- 85 (572)
Q Consensus 27 PLdpWlrYIkWiEEsyPsGg~ks~L~~LLERCtr~FkddERY----------KND~RYLKIWLk-YAd~~---------- 85 (572)
+|+-|-+-+.=+..+.+... +....|++..=.++...... .|-.+.+.||+. .-+..
T Consensus 225 ~l~~WkE~La~i~t~a~~e~--~ef~~Lc~~LG~RL~~~g~~~~A~lCYi~Ag~~dk~v~iW~~~~~~~~~~~~~~~~s~ 302 (399)
T 2pm7_A 225 DVSQWKFISKAIQNLYPNDI--AQRNEMMIKLGDRMKENGHRQDSLTLYLAAGSLDKVASIWLSEFPDLEDKLKKDNKTI 302 (399)
T ss_dssp CGGGHHHHHHHHHHHCTTCH--HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHHSHHHHHHHHHHTTCCH
T ss_pred ChhhHHHHHHHHHhcCCccH--hHHHHHHHHHHHHHHhCCChhhhhHHHHhhCCHHHHHHHHHHhcchhhhccccccCCc
Confidence 68899998888887764220 12233333333333222111 356788999987 22110
Q ss_pred --CCHHHHHHHHH---------H---CCcchhhHHHHHHHHHHHHHccCHHHHHHHHHH
Q 037115 86 --DDPRVMLRTME---------V---NHIGTKRSLFYQANALYYEKMKKFEEAEKMYHL 130 (572)
Q Consensus 86 --dDP~dIF~fL~---------s---ngIGtklALFYEaWA~~LE~~g~fkeAdeIYql 130 (572)
..+..+-.+|+ . .-.+..++.+|.+||.+|..+|++..|.+.+..
T Consensus 303 ~~~~~~~Lqe~iEkv~vl~~a~~~~~~~~~~~l~~~~~eYA~lLA~qG~l~~A~~yL~~ 361 (399)
T 2pm7_A 303 YEAHSECMTEFIERFTVFSNFINGSSTINNEQLIAKFLEFINLTTSTGNFELATEFLNS 361 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCC---CCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHhcCCCcCcHHHHHHHHHHHHHHHhCCCHHHHHHHHHh
Confidence 11223322222 1 125567999999999999999999999999975
No 147
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=33.15 E-value=2.2e+02 Score=25.01 Aligned_cols=73 Identities=11% Similarity=-0.035 Sum_probs=49.0
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
..++++++....+ ...+|...+.. .+.+...|..+.. +....+..|...|..+...|++++|.
T Consensus 41 ~~~~~~~~~~~~~---------~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~--~~~~~~~~~~~la~~~~~~~~~~~A~ 109 (327)
T 3cv0_A 41 ALAFEAVCQAAPE---------REEAWRSLGLTQAENEKDGLAIIALNHARM--LDPKDIAVHAALAVSHTNEHNANAAL 109 (327)
T ss_dssp HHHHHHHHHHCTT---------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHhCCC---------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--cCcCCHHHHHHHHHHHHHcCCHHHHH
Confidence 4566666664322 23444444432 2345566666554 34556778888999999999999999
Q ss_pred HHHHHHHHCC
Q 037115 126 KMYHLGVQNL 135 (572)
Q Consensus 126 eIYqlGIqr~ 135 (572)
..|+..+...
T Consensus 110 ~~~~~~~~~~ 119 (327)
T 3cv0_A 110 ASLRAWLLSQ 119 (327)
T ss_dssp HHHHHHHHTS
T ss_pred HHHHHHHHhC
Confidence 9999999763
No 148
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=33.10 E-value=4e+02 Score=26.93 Aligned_cols=76 Identities=14% Similarity=-0.011 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
...+++++... +....+|..++.. .+++...|+.... +....+..|...|..+...|++++|.
T Consensus 43 ~~~~~~al~~~---------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~--~~p~~~~~~~~la~~~~~~g~~~~A~ 111 (568)
T 2vsy_A 43 EMAVQRGLALH---------PGHPEAVARLGRVRWTQQRHAEAAVLLQQASD--AAPEHPGIALWLGHALEDAGQAEAAA 111 (568)
T ss_dssp HHHHHHHHTTS---------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHhC---------CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHcCCHHHHH
Confidence 45566665542 2234455555543 3345666666554 44566888889999999999999999
Q ss_pred HHHHHHHHCCCCc
Q 037115 126 KMYHLGVQNLAEP 138 (572)
Q Consensus 126 eIYqlGIqr~AqP 138 (572)
+.|+.+++....-
T Consensus 112 ~~~~~al~~~p~~ 124 (568)
T 2vsy_A 112 AAYTRAHQLLPEE 124 (568)
T ss_dssp HHHHHHHHHCTTC
T ss_pred HHHHHHHHhCCCC
Confidence 9999999976443
No 149
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=32.44 E-value=58 Score=25.19 Aligned_cols=34 Identities=15% Similarity=-0.043 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 104 RSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 104 lALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
.+..|...|..+...|+|++|...|+..+.....
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 39 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPD 39 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 3556778889999999999999999999987543
No 150
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=32.38 E-value=1.5e+02 Score=21.93 Aligned_cols=48 Identities=8% Similarity=0.059 Sum_probs=36.1
Q ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 88 PRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 88 P~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
+...|...... ....+..|..+|.++...|++.+|...|+.++.....
T Consensus 31 A~~~~~~~~~~--~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 78 (131)
T 2vyi_A 31 AVHFYGKAIEL--NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA 78 (131)
T ss_dssp HHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHc--CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc
Confidence 44555554443 3345777888999999999999999999999987544
No 151
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=31.90 E-value=1e+02 Score=29.69 Aligned_cols=47 Identities=4% Similarity=-0.062 Sum_probs=30.8
Q ss_pred CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 87 DPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 87 DP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
.+...|..... +.-..+..|-..|..|...|+|++|...|++++...
T Consensus 248 ~A~~~~~~al~--~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~ 294 (338)
T 2if4_A 248 EAIGHCNIVLT--EEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYA 294 (338)
T ss_dssp HHHHHHHHHHH--HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHH--hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 45555555443 334556666677777888888888888888887653
No 152
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=31.63 E-value=69 Score=27.56 Aligned_cols=55 Identities=20% Similarity=0.221 Sum_probs=39.0
Q ss_pred chhhHHHHHHHHHHHHHc---cCHHHHHHHHHHHHHCC-------CCcHHHHHHHHHHHHHHHHH
Q 037115 101 GTKRSLFYQANALYYEKM---KKFEEAEKMYHLGVQNL-------AEPADELQKSYEQFLHRMER 155 (572)
Q Consensus 101 GtklALFYEaWA~~LE~~---g~fkeAdeIYqlGIqr~-------AqPldrLk~ay~qFq~Rm~r 155 (572)
..+.|.-|+.=|.-.+.. |+-.+|.+.|+.||..- ......-..+-++.+.+|..
T Consensus 12 ~h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~ 76 (89)
T 3eab_A 12 FHKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMT 76 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHH
Confidence 356778889999999988 99999999999999851 12233334555666666554
No 153
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=31.52 E-value=1.6e+02 Score=21.76 Aligned_cols=50 Identities=10% Similarity=0.060 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCCc
Q 037115 87 DPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAEP 138 (572)
Q Consensus 87 DP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~AqP 138 (572)
++..+|.-+... +......|...|..+...|++++|..+|+.++......
T Consensus 53 ~A~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 102 (136)
T 2fo7_A 53 EAIEYYQKALEL--DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 102 (136)
T ss_dssp HHHHHHHHHHHH--CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHH--CCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC
Confidence 455666666543 44556677888999999999999999999999876443
No 154
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=31.01 E-value=2.8e+02 Score=24.57 Aligned_cols=29 Identities=10% Similarity=-0.078 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHC
Q 037115 106 LFYQANALYYEKMKKFEEAEKMYHLGVQN 134 (572)
Q Consensus 106 LFYEaWA~~LE~~g~fkeAdeIYqlGIqr 134 (572)
..|...|.++...|++++|..+|+.++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 183 (359)
T 3ieg_A 155 ELRELRAECFIKEGEPRKAISDLKAASKL 183 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 34444444444444444444444444443
No 155
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=30.89 E-value=2.4e+02 Score=26.15 Aligned_cols=50 Identities=12% Similarity=0.048 Sum_probs=35.5
Q ss_pred CCHHHHHHHHHHC--Ccc----hhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 86 DDPRVMLRTMEVN--HIG----TKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 86 dDP~dIF~fL~sn--gIG----tklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
..+...|...... .+| ...+..|...|..+...|++.+|...|+.++...
T Consensus 110 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 165 (373)
T 1hz4_A 110 QTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVL 165 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence 3455566554432 122 3456777788889999999999999999998754
No 156
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=30.28 E-value=62 Score=24.06 Aligned_cols=29 Identities=14% Similarity=-0.033 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 037115 105 SLFYQANALYYEKMKKFEEAEKMYHLGVQ 133 (572)
Q Consensus 105 ALFYEaWA~~LE~~g~fkeAdeIYqlGIq 133 (572)
+..|...|..+...|+|.+|...|+.++.
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 32 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLIT 32 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
No 157
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=29.82 E-value=2.3e+02 Score=23.23 Aligned_cols=75 Identities=13% Similarity=0.162 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHH-HHHccCH--H
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALY-YEKMKKF--E 122 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~-LE~~g~f--k 122 (572)
..++++++....++ ..+|..++.. ...+...|..... +....+..|..+|.. +...|++ .
T Consensus 30 ~~~~~~al~~~p~~---------~~~~~~lg~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~la~~l~~~~~~~~~~ 98 (177)
T 2e2e_A 30 LQALQDKIRANPQN---------SEQWALLGEYYLWQNDYSNSLLAYRQALQ--LRGENAELYAALATVLYYQASQHMTA 98 (177)
T ss_dssp CHHHHHHHHHCCSC---------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HHCSCHHHHHHHHHHHHHHTTTCCCH
T ss_pred HHHHHHHHHhCCCc---------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--cCCCCHHHHHHHHHHHHHhcCCcchH
Confidence 45777777653322 2344444442 2345555555443 344567788888988 7789999 9
Q ss_pred HHHHHHHHHHHCCCC
Q 037115 123 EAEKMYHLGVQNLAE 137 (572)
Q Consensus 123 eAdeIYqlGIqr~Aq 137 (572)
+|...|+.++.....
T Consensus 99 ~A~~~~~~al~~~p~ 113 (177)
T 2e2e_A 99 QTRAMIDKALALDSN 113 (177)
T ss_dssp HHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999987543
No 158
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=29.56 E-value=1.6e+02 Score=25.80 Aligned_cols=30 Identities=17% Similarity=-0.040 Sum_probs=25.8
Q ss_pred hhHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 037115 103 KRSLFYQANALYYEKMKKFEEAEKMYHLGV 132 (572)
Q Consensus 103 klALFYEaWA~~LE~~g~fkeAdeIYqlGI 132 (572)
.+|.||..-|..+-..|+|++|.+-.+...
T Consensus 13 n~AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 13 NLAHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 379999999999999999999977666655
No 159
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=29.35 E-value=1.2e+02 Score=26.63 Aligned_cols=50 Identities=4% Similarity=-0.086 Sum_probs=30.8
Q ss_pred CCHHHHHHHHHHCCcchh---hHHHHHHHHHH----------------HHHccCHHHHHHHHHHHHHCC
Q 037115 86 DDPRVMLRTMEVNHIGTK---RSLFYQANALY----------------YEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 86 dDP~dIF~fL~sngIGtk---lALFYEaWA~~----------------LE~~g~fkeAdeIYqlGIqr~ 135 (572)
..+...|..+....=... .|+|+.+.+.+ +...|++++|...|+..|...
T Consensus 58 ~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~ 126 (225)
T 2yhc_A 58 PLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGY 126 (225)
T ss_dssp HHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHC
Confidence 345566666554333322 25555555443 234689999999999999874
No 160
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=28.24 E-value=92 Score=25.24 Aligned_cols=34 Identities=26% Similarity=0.360 Sum_probs=28.7
Q ss_pred chhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC
Q 037115 101 GTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQN 134 (572)
Q Consensus 101 GtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr 134 (572)
-...+..|...|..+...|+|++|.+.|+.+|.-
T Consensus 38 ~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 38 DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEV 71 (127)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 3455677888899999999999999999999874
No 161
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=27.82 E-value=3.7e+02 Score=24.93 Aligned_cols=115 Identities=7% Similarity=-0.080 Sum_probs=0.0
Q ss_pred HhHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHhhCCCCcccCchHHHHHHHHHHhccccccccchHHHHHHHHHhcCcCC
Q 037115 8 YDTFFSSLIQDIKSYSGTDPLLPWLQGIKKMKDSLPSKLLKEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDFVDD 87 (572)
Q Consensus 8 ~~~~fssLes~I~sYsGDDPLdpWlrYIkWiEEsyPsGg~ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~~dD 87 (572)
+++....|...|... .+-.+.|.......... +.-..-..++++++....++... |..+=..|...-+-
T Consensus 253 ~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~----g~~~~A~~~~~~al~~~p~~~~~-----~~~l~~~~~~~g~~ 321 (388)
T 1w3b_A 253 IDLAIDTYRRAIELQ--PHFPDAYCNLANALKEK----GSVAEAEDCYNTALRLCPTHADS-----LNNLANIKREQGNI 321 (388)
T ss_dssp HHHHHHHHHHHHHTC--SSCHHHHHHHHHHHHHH----SCHHHHHHHHHHHHHHCTTCHHH-----HHHHHHHHHTTTCH
T ss_pred HHHHHHHHHHHHhhC--CCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHhhCcccHHH-----HHHHHHHHHHcCCH
Q ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 037115 88 PRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQ 133 (572)
Q Consensus 88 P~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIq 133 (572)
...+-.|-..-.+....+..|...|..+...|++++|...|+..+.
T Consensus 322 ~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 367 (388)
T 1w3b_A 322 EEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIR 367 (388)
T ss_dssp HHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
No 162
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=27.56 E-value=3e+02 Score=28.08 Aligned_cols=134 Identities=7% Similarity=-0.062 Sum_probs=83.5
Q ss_pred HHHHHHhhcCCCCCCcHHHHHHHHHHHhhCC-CCccc--C---chHHHHHHHHHHhccccccccchHHHHHHHHHhcC--
Q 037115 13 SSLIQDIKSYSGTDPLLPWLQGIKKMKDSLP-SKLLK--E---KLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF-- 84 (572)
Q Consensus 13 ssLes~I~sYsGDDPLdpWlrYIkWiEEsyP-sGg~k--s---~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~-- 84 (572)
..+.+.+....-+|+=.+++..|-|..-.-- .++.. + ....+|||.+.- |+.|-+..=|.-+=..|...
T Consensus 138 ~~~~~~l~~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleL---DP~~~~GsA~~~LG~lY~~vPp 214 (301)
T 3u64_A 138 QRLHKVLSRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDL---WPSYQEGAVWNVLTKFYAAAPE 214 (301)
T ss_dssp HHHHHHHTTCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHH---CTTHHHHHHHHHHHHHHHHSCT
T ss_pred hhHHHHHHHcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHh---CCCcccCHHHHHHHHHHHhCCC
Confidence 3556667777778888888888988764332 23322 1 123445555443 56655544444444556653
Q ss_pred --cCC---HHHHHHHHHHCCcchhhHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHCCCC--cHHHHHHHHHHHH
Q 037115 85 --VDD---PRVMLRTMEVNHIGTKRSLFYQANALYYEK-MKKFEEAEKMYHLGVQNLAE--PADELQKSYEQFL 150 (572)
Q Consensus 85 --~dD---P~dIF~fL~sngIGtklALFYEaWA~~LE~-~g~fkeAdeIYqlGIqr~Aq--PldrLk~ay~qFq 150 (572)
..+ ++..|+--..-.=|. ...-|..||.+|.. .|++++|.+.+++.++...+ |-..|....++=+
T Consensus 215 ~~gGd~ekA~~~ferAL~LnP~~-~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~~P~~~lan~~~q~e 287 (301)
T 3u64_A 215 SFGGGMEKAHTAFEHLTRYCSAH-DPDHHITYADALCIPLNNRAGFDEALDRALAIDPESVPHNKLLVILSQKR 287 (301)
T ss_dssp TTTCCHHHHHHHHHHHHHHCCTT-CSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGGCSSCHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHhCCCC-CchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCCChhHHHHHHHHH
Confidence 334 345555544332221 24456678998877 59999999999999999888 8877776655433
No 163
>2bn5_A PSI; nuclear protein, splicing, protein-protein interaction, structure, proline-rich peptide; NMR {Drosophila melanogaster} PDB: 2bn6_A
Probab=27.45 E-value=50 Score=24.01 Aligned_cols=22 Identities=36% Similarity=0.430 Sum_probs=19.3
Q ss_pred HHHHHHHHHccCHHHHHHHHHH
Q 037115 109 QANALYYEKMKKFEEAEKMYHL 130 (572)
Q Consensus 109 EaWA~~LE~~g~fkeAdeIYql 130 (572)
..|+.||-+.|...+|+.|-+.
T Consensus 6 aQW~eYYrsiG~~~eAeaIe~q 27 (33)
T 2bn5_A 6 AQWAEYYRSVGKIEEAEAIEKT 27 (33)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHH
Confidence 5799999999999999999544
No 164
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=27.36 E-value=2.3e+02 Score=35.06 Aligned_cols=112 Identities=12% Similarity=0.099 Sum_probs=70.1
Q ss_pred HHHHHhhcCCCCCCcHHHHHHHHHHHhhC--CCCc---ccCchHHHHHHHHHHhccccccccchHHHHHHHHHh------
Q 037115 14 SLIQDIKSYSGTDPLLPWLQGIKKMKDSL--PSKL---LKEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLM------ 82 (572)
Q Consensus 14 sLes~I~sYsGDDPLdpWlrYIkWiEEsy--PsGg---~ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYA------ 82 (572)
++..+++-+.--+.-..|..|-+..+..- .... -+++-...+.+++..+....+|..=++||..-++..
T Consensus 1091 nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKAdD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Id 1170 (1630)
T 1xi4_A 1091 NLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVE 1170 (1630)
T ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhcCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccccccc
Confidence 33444444433466788888877765321 1000 022334566668888888888888888887654433
Q ss_pred --------cCcCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHH
Q 037115 83 --------DFVDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLG 131 (572)
Q Consensus 83 --------d~~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlG 131 (572)
.. +...++=.|+. +...+.+| .||.+|+..|+|++|...|...
T Consensus 1171 t~LafaYAKl-~rleele~fI~----~~n~ad~~-~iGd~le~eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1171 TELIFALAKT-NRLAELEEFIN----GPNNAHIQ-QVGDRCYDEKMYDAAKLLYNNV 1221 (1630)
T ss_pred HHHHHHHHhh-cCHHHHHHHHh----CCCHHHHH-HHHHHHHhcCCHHHHHHHHHhh
Confidence 33 34444444442 34455555 6999999999999999999984
No 165
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=27.06 E-value=24 Score=36.07 Aligned_cols=109 Identities=11% Similarity=-0.029 Sum_probs=59.5
Q ss_pred hhHhHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHhhCCCCcccCchHHHHHHHHHHhccccccccchHHHHHHHHHhcC-
Q 037115 6 AVYDTFFSSLIQDIKSYSGTDPLLPWLQGIKKMKDSLPSKLLKEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF- 84 (572)
Q Consensus 6 ~~~~~~fssLes~I~sYsGDDPLdpWlrYIkWiEEsyPsGg~ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~- 84 (572)
-.++++...+...|+... +-...|...-.-... .+ .-..-...++++++. |+.+...|..++..
T Consensus 20 g~~~~A~~~~~~Al~~~p--~~~~~~~~lg~~~~~---~g-~~~~A~~~~~~al~l---------~p~~~~~~~~lg~~~ 84 (477)
T 1wao_1 20 KDYENAIKFYSQAIELNP--SNAIYYGNRSLAYLR---TE-CYGYALGDATRAIEL---------DKKYIKGYYRRAASN 84 (477)
T ss_dssp TCHHHHHHHHHHHHHHCT--TCHHHHHHHHHHHHH---TT-CHHHHHHHHHHHHHS---------CTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCC--ccHHHHHHHHHHHHH---hc-CHHHHHHHHHHHHHh---------CCCCHHHHHHHHHHH
Confidence 345666677777777642 223444332221111 11 111124556666554 34445566655543
Q ss_pred -----cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHH
Q 037115 85 -----VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYH 129 (572)
Q Consensus 85 -----~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYq 129 (572)
.+++...|+......-....+.++.+.+..+...|+|++|.++|+
T Consensus 85 ~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 85 MALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp HHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 346777888777766566667777777766889999999999999
No 166
>3cax_A Uncharacterized protein PF0695; structural genomics, unknown function, PSI-2, protein struct initiative; 2.43A {Pyrococcus furiosus dsm 3638}
Probab=27.04 E-value=1.7e+02 Score=29.28 Aligned_cols=102 Identities=8% Similarity=0.030 Sum_probs=60.0
Q ss_pred hHHHHHHHHHHhccccccccchHHHHHHHHHhcCcCC-------HH--HHHHHHHHCCcchhhHHHHHHHHHHHHHccCH
Q 037115 51 LPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDFVDD-------PR--VMLRTMEVNHIGTKRSLFYQANALYYEKMKKF 121 (572)
Q Consensus 51 L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~~dD-------P~--dIF~fL~sngIGtklALFYEaWA~~LE~~g~f 121 (572)
++..|+..+.++....-+..+.-.+..|..+++++.+ +. -+|-+|.+.|+-.- --.=|+..-+-...+
T Consensus 24 ~l~~l~~~~~~i~~~~~~~~~~~~~~~l~~~~~~l~~l~~~H~~kEE~~LFP~le~~g~~~p---~~vM~~eHd~~r~~l 100 (369)
T 3cax_A 24 DAEMLNLYAKTLATTKDERMREEILGVLEEIVSSLRMVGFTHYNREEMLIFPYIERRGLTVI---ATVLWTKHDEIRAMI 100 (369)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTHHHHTHHHHHHHHTHHHHHTTTCHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHhhhhhHhhhhHHHHHhCCCCC---CchHHHHhHHHHHHH
Confidence 3456666666666554443233445555544444322 11 57999987776533 334455555555555
Q ss_pred HHHHHHHHHHHHCCCCc----HHHHHHHHHHHHHHHHHHHh
Q 037115 122 EEAEKMYHLGVQNLAEP----ADELQKSYEQFLHRMERHNK 158 (572)
Q Consensus 122 keAdeIYqlGIqr~AqP----ldrLk~ay~qFq~Rm~rr~~ 158 (572)
+++.+.... ..+-| ...+......|...+.+|+-
T Consensus 101 ~~l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~l~~Hi~ 138 (369)
T 3cax_A 101 KQLAELLRK---REEMPWEEFVEKFKAKAGEVAFALSDMVF 138 (369)
T ss_dssp HHHHHHHHT---GGGSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc---ccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 555555543 11356 78888899999988888765
No 167
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=26.55 E-value=1.6e+02 Score=23.67 Aligned_cols=50 Identities=8% Similarity=-0.067 Sum_probs=38.0
Q ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 86 DDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 86 dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
..+...|.-... +--..+..|...|..+...|++++|...|++.+...-.
T Consensus 34 ~~A~~~~~~al~--~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 83 (121)
T 1hxi_A 34 AEAALAFEAVCQ--KEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPK 83 (121)
T ss_dssp HHHHHHHHHHHH--HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHH--HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 345566665554 34456777778899999999999999999999997543
No 168
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=26.19 E-value=2.7e+02 Score=22.81 Aligned_cols=80 Identities=9% Similarity=-0.028 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhccccccccch-HHHHHHHHHhcC------cCCHHHHHHHHH----HCCcchhhHHHHHHHHHHHHHccC
Q 037115 52 PRFLQKCAQTFESDRRYRNDM-RYLRIWLHLMDF------VDDPRVMLRTME----VNHIGTKRSLFYQANALYYEKMKK 120 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~-RYLKIWLkYAd~------~dDP~dIF~fL~----sngIGtklALFYEaWA~~LE~~g~ 120 (572)
...+++++..+.. ..+++ ....+|...+.. .+.+...|.... ..+--...+..|...|..+...|+
T Consensus 86 ~~~~~~al~~~~~---~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~ 162 (203)
T 3gw4_A 86 RRCFLEERELLAS---LPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKN 162 (203)
T ss_dssp HHHHHHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHH---cCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcC
Confidence 4667777777653 33333 334444444432 223444444433 233334457778899999999999
Q ss_pred HHHHHHHHHHHHHC
Q 037115 121 FEEAEKMYHLGVQN 134 (572)
Q Consensus 121 fkeAdeIYqlGIqr 134 (572)
+.+|...|+.++.-
T Consensus 163 ~~~A~~~~~~al~~ 176 (203)
T 3gw4_A 163 LLEAQQHWLRARDI 176 (203)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999888764
No 169
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=26.10 E-value=2.1e+02 Score=26.25 Aligned_cols=31 Identities=10% Similarity=-0.050 Sum_probs=27.4
Q ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHHC
Q 037115 104 RSLFYQANALYYEKMKKFEEAEKMYHLGVQN 134 (572)
Q Consensus 104 lALFYEaWA~~LE~~g~fkeAdeIYqlGIqr 134 (572)
.+..|...+..+...|++++|...|+++|.-
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l 106 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQI 106 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 4677888899999999999999999999874
No 170
>1yqf_A Hypothetical protein LMAJ011689; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.30A {Leishmania major} SCOP: d.25.1.1
Probab=25.52 E-value=59 Score=30.73 Aligned_cols=30 Identities=13% Similarity=0.213 Sum_probs=27.6
Q ss_pred HHHHHHHHCCcchhhHHHHHHHHHHHHHcc
Q 037115 90 VMLRTMEVNHIGTKRSLFYQANALYYEKMK 119 (572)
Q Consensus 90 dIF~fL~sngIGtklALFYEaWA~~LE~~g 119 (572)
.++.||..+||-..+|.|=.+|+...|+..
T Consensus 161 ~l~~YLeeRGI~~~la~fl~~y~~~KE~~E 190 (203)
T 1yqf_A 161 CVMTYLEKRGVDEKLGEFVVLYSFWAEQQD 190 (203)
T ss_dssp HHHHHHHHTTCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999988753
No 171
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=25.11 E-value=2.7e+02 Score=28.95 Aligned_cols=39 Identities=18% Similarity=0.071 Sum_probs=26.6
Q ss_pred HCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCC
Q 037115 97 VNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNL 135 (572)
Q Consensus 97 sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~ 135 (572)
....+-..+..|.+.|..+-..|++++|...+++++.-+
T Consensus 269 a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln 307 (372)
T 3ly7_A 269 TLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE 307 (372)
T ss_dssp TCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred hcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC
Confidence 335556677777777766666677777777777777765
No 172
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=24.48 E-value=1.2e+02 Score=24.56 Aligned_cols=48 Identities=10% Similarity=0.112 Sum_probs=35.6
Q ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCCC
Q 037115 88 PRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLAE 137 (572)
Q Consensus 88 P~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~Aq 137 (572)
+...|.... .+....+..|...|..+...|++++|...|+..|+-...
T Consensus 32 A~~~~~~al--~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 79 (126)
T 4gco_A 32 AMRHYNEAV--KRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSK 79 (126)
T ss_dssp HHHHHHHHH--HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHH--HhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh
Confidence 444444333 234556778888899999999999999999999987544
No 173
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=24.40 E-value=49 Score=30.75 Aligned_cols=64 Identities=5% Similarity=-0.112 Sum_probs=0.0
Q ss_pred chHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHC
Q 037115 71 DMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQN 134 (572)
Q Consensus 71 D~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr 134 (572)
+|....+|+.++.. ..++...|.-+....=+..-+..|...+.+|+..|+..+|...|++.+..
T Consensus 215 ~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 215 NPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLYA 284 (287)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHHH
No 174
>3jv1_A P22 protein; MAM33 family, hydrolase; 2.00A {Trypanosoma brucei} SCOP: d.25.1.0
Probab=24.35 E-value=61 Score=30.20 Aligned_cols=30 Identities=10% Similarity=0.166 Sum_probs=27.6
Q ss_pred HHHHHHHHCCcchhhHHHHHHHHHHHHHcc
Q 037115 90 VMLRTMEVNHIGTKRSLFYQANALYYEKMK 119 (572)
Q Consensus 90 dIF~fL~sngIGtklALFYEaWA~~LE~~g 119 (572)
.++.||..+||-..+|.|=.+|+...|+..
T Consensus 140 ~l~~yLeeRGI~~~la~fl~~y~~~KEq~E 169 (182)
T 3jv1_A 140 SFTSYLSARGVNDTLANFIDQFSLWSEQAD 169 (182)
T ss_dssp HHHHHHHTTTCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999988753
No 175
>1p32_A Mitochondrial matrix protein, SF2P32; 2.25A {Homo sapiens} SCOP: d.25.1.1 PDB: 3rpx_A
Probab=23.95 E-value=61 Score=30.65 Aligned_cols=30 Identities=3% Similarity=-0.095 Sum_probs=27.5
Q ss_pred HHHHHHHHCCcchhhHHHHHHHHHHHHHcc
Q 037115 90 VMLRTMEVNHIGTKRSLFYQANALYYEKMK 119 (572)
Q Consensus 90 dIF~fL~sngIGtklALFYEaWA~~LE~~g 119 (572)
.++.||..+||-..+|.|=..|+...|++.
T Consensus 165 ~l~~yLeeRGI~~~la~fl~~y~~~KE~~e 194 (209)
T 1p32_A 165 HLMDFLADRGVDNTFADELVELSTALEHQE 194 (209)
T ss_dssp HHHHHHHTTTCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999888753
No 176
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=23.95 E-value=3e+02 Score=25.21 Aligned_cols=31 Identities=16% Similarity=0.099 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHHHHc-cCHHHHHHHHHHHHHC
Q 037115 104 RSLFYQANALYYEKM-KKFEEAEKMYHLGVQN 134 (572)
Q Consensus 104 lALFYEaWA~~LE~~-g~fkeAdeIYqlGIqr 134 (572)
.+..|...|.+++.. |++++|...|+.++.-
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~ 147 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEW 147 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH
Confidence 467888999999997 9999999999999874
No 177
>1jog_A Hypothetical protein HI0074; structural genomics, structure 2 function project, S2F, unknown function; 2.40A {Haemophilus influenzae} SCOP: a.24.16.2
Probab=22.96 E-value=2.1e+02 Score=25.57 Aligned_cols=68 Identities=10% Similarity=-0.059 Sum_probs=46.9
Q ss_pred chHHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCH--
Q 037115 50 KLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKF-- 121 (572)
Q Consensus 50 ~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~f-- 121 (572)
++..-+|.|.....+ -++-+|.|-.+ ...|+++|.-++.+||=..- +.|...+..++..
T Consensus 45 g~iq~fe~t~Elawk---------~~k~~L~~~g~~~~~~~~~s~rd~~r~a~~~GlI~d~----~~w~~m~~~RN~tvH 111 (146)
T 1jog_A 45 GAIQKFEFVYELSLK---------MMKRQLQQDAINTDDIGAYGFKDILREALRFGLIGDM----SKWVAYRDMRNITSH 111 (146)
T ss_dssp HHHHHHHHHHHHHHH---------HHHHHHHHHTCSCCCTTSCCHHHHHHHHHHTTSCSCH----HHHHHHHHHHTTGGG
T ss_pred HHHHHHHHHHHHHHH---------HHHHHHHHcCCCccccCCCCHHHHHHHHHHcCCCCcH----HHHHHHHHHhhHhcc
Confidence 445555555555443 36677777654 57899999999999996554 7888888877643
Q ss_pred ----HHHHHHHHH
Q 037115 122 ----EEAEKMYHL 130 (572)
Q Consensus 122 ----keAdeIYql 130 (572)
..|..||..
T Consensus 112 ~Y~e~~a~~v~~~ 124 (146)
T 1jog_A 112 TYDQEKAMAVYAQ 124 (146)
T ss_dssp TTSHHHHHHHHHT
T ss_pred cccHhhHHHHHHH
Confidence 556667654
No 178
>4giw_A RUN and SH3 domain-containing protein 1; NGF-TRKA signaling pathway, NF-KB pathway, signaling protein; 2.00A {Homo sapiens}
Probab=22.32 E-value=65 Score=30.17 Aligned_cols=62 Identities=6% Similarity=0.038 Sum_probs=48.5
Q ss_pred HHHHHHHHhccccccccchHHHHHHHHHhcCcCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHH
Q 037115 54 FLQKCAQTFESDRRYRNDMRYLRIWLHLMDFVDDPRVMLRTMEVNHIGTKRSLFYQANALYYEK 117 (572)
Q Consensus 54 LLERCtr~FkddERYKND~RYLKIWLkYAd~~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~ 117 (572)
++..+++........+.+.--.|.||.++=...-=...+..|..+. .-+..||+.||.+...
T Consensus 99 ~~~~~v~~i~~l~~l~t~~gr~RA~ir~aLn~~~L~~~l~~l~~~~--~~l~~~Y~~~a~lr~s 160 (198)
T 4giw_A 99 SLGTLYSQVSRLAPLSSSRSRFHAFILGLLNTKQLELWFSSLQEDA--GLLSLMYMPTGFFSLA 160 (198)
T ss_dssp HHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHTCHHHHHHHHHTCH--HHHHHHBCTTSHHHHT
T ss_pred HHHHHHHHHHccccccCcchHHHHHHHHHHHHCHHHHHHHHHHhCh--HHHHHHcCCchHhhcc
Confidence 4566777778888889998899999999966555556777777654 4578999999998754
No 179
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=21.65 E-value=5e+02 Score=24.31 Aligned_cols=82 Identities=6% Similarity=0.020 Sum_probs=54.8
Q ss_pred chHHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHH----HCCcchhhHHHHHHHHHHHHHcc
Q 037115 50 KLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTME----VNHIGTKRSLFYQANALYYEKMK 119 (572)
Q Consensus 50 ~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~----sngIGtklALFYEaWA~~LE~~g 119 (572)
....++++|+...... ++..-..++|+..+.. ..++..++.-+. ...--...+.+|..-+.++-..|
T Consensus 113 ~a~~~~~~~~~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (434)
T 4b4t_Q 113 DQIFVCEKSIEFAKRE---KRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLR 189 (434)
T ss_dssp HHHHHHHHHHHHHHHS---SCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHh---CccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhC
Confidence 3466777777766544 3334455666666654 233445555443 22334567889999999999999
Q ss_pred CHHHHHHHHHHHHHC
Q 037115 120 KFEEAEKMYHLGVQN 134 (572)
Q Consensus 120 ~fkeAdeIYqlGIqr 134 (572)
+|.+|..+|+..+..
T Consensus 190 ~~~~A~~~~~~al~~ 204 (434)
T 4b4t_Q 190 NLAKSKASLTAARTA 204 (434)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH
Confidence 999999999988764
No 180
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=21.53 E-value=7.3e+02 Score=27.22 Aligned_cols=113 Identities=5% Similarity=-0.043 Sum_probs=69.1
Q ss_pred hHhHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHhhCCCCcccCchHHHHHHHHHHhccccccccchHHHHHHHHHhcC--
Q 037115 7 VYDTFFSSLIQDIKSYSGTDPLLPWLQGIKKMKDSLPSKLLKEKLPRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF-- 84 (572)
Q Consensus 7 ~~~~~fssLes~I~sYsGDDPLdpWlrYIkWiEEsyPsGg~ks~L~~LLERCtr~FkddERYKND~RYLKIWLkYAd~-- 84 (572)
.++++...+...|+-.. ++ ...|...-.-..+ .| .-..=...++++++. |+.+...|..++..
T Consensus 24 ~~~eAi~~~~kAl~l~P-~~-~~a~~nLg~~l~~---~g-~~~eA~~~~~~Al~l---------~P~~~~a~~nLg~~l~ 88 (723)
T 4gyw_A 24 NIEEAVRLYRKALEVFP-EF-AAAHSNLASVLQQ---QG-KLQEALMHYKEAIRI---------SPTFADAYSNMGNTLK 88 (723)
T ss_dssp CHHHHHHHHHHHHHHCS-CC-HHHHHHHHHHHHH---TT-CHHHHHHHHHHHHHH---------CTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCC-CC-HHHHHHHHHHHHH---cC-CHHHHHHHHHHHHHh---------CCCCHHHHHHHHHHHH
Confidence 45666677777776542 22 2344433222221 11 111224566666654 34455666665553
Q ss_pred ----cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHHHHHHHHHHCCC
Q 037115 85 ----VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAEKMYHLGVQNLA 136 (572)
Q Consensus 85 ----~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAdeIYqlGIqr~A 136 (572)
.+++...|+-.. .|--..+..|...|..|...|++++|.+.|+++|+-.-
T Consensus 89 ~~g~~~~A~~~~~kAl--~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P 142 (723)
T 4gyw_A 89 EMQDVQGALQCYTRAI--QINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKP 142 (723)
T ss_dssp HTTCHHHHHHHHHHHH--HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred HcCCHHHHHHHHHHHH--HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 234556665544 35567788899999999999999999999999998653
No 181
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=21.21 E-value=4.2e+02 Score=23.23 Aligned_cols=75 Identities=13% Similarity=0.109 Sum_probs=49.9
Q ss_pred HHHHHHHHHHhccccccccchHHHHHHHHHhcC------cCCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHccCHHHHH
Q 037115 52 PRFLQKCAQTFESDRRYRNDMRYLRIWLHLMDF------VDDPRVMLRTMEVNHIGTKRSLFYQANALYYEKMKKFEEAE 125 (572)
Q Consensus 52 ~~LLERCtr~FkddERYKND~RYLKIWLkYAd~------~dDP~dIF~fL~sngIGtklALFYEaWA~~LE~~g~fkeAd 125 (572)
..++++++....++ ..+|..++.. ...+..+|..+.. +....+..|...|..+...|++++|.
T Consensus 192 ~~~~~~~~~~~~~~---------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~--~~~~~~~~~~~l~~~~~~~g~~~~A~ 260 (327)
T 3cv0_A 192 AANLRRAVELRPDD---------AQLWNKLGATLANGNRPQEALDAYNRALD--INPGYVRVMYNMAVSYSNMSQYDLAA 260 (327)
T ss_dssp HHHHHHHHHHCTTC---------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHhCCCc---------HHHHHHHHHHHHHcCCHHHHHHHHHHHHH--cCCCCHHHHHHHHHHHHHhccHHHHH
Confidence 46666666653222 2344444432 2345566666554 34556677888899999999999999
Q ss_pred HHHHHHHHCCCC
Q 037115 126 KMYHLGVQNLAE 137 (572)
Q Consensus 126 eIYqlGIqr~Aq 137 (572)
..|+..+.....
T Consensus 261 ~~~~~a~~~~~~ 272 (327)
T 3cv0_A 261 KQLVRAIYMQVG 272 (327)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHhCCc
Confidence 999999987544
No 182
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=20.13 E-value=1.2e+02 Score=25.73 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHHHHccCHHHHHHHHHHHHHC
Q 037115 104 RSLFYQANALYYEKMKKFEEAEKMYHLGVQN 134 (572)
Q Consensus 104 lALFYEaWA~~LE~~g~fkeAdeIYqlGIqr 134 (572)
.+.-|...|..+...|+|.+|...|+.++..
T Consensus 37 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 67 (198)
T 2fbn_A 37 SAFDIKEEGNEFFKKNEINEAIVKYKEALDF 67 (198)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3455677888999999999999999999985
Done!