BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037117
(529 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O95822|DCMC_HUMAN Malonyl-CoA decarboxylase, mitochondrial OS=Homo sapiens GN=MLYCD
PE=1 SV=3
Length = 493
Score = 292 bits (748), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 180/447 (40%), Positives = 245/447 (54%), Gaps = 38/447 (8%)
Query: 75 DFSEGYFSLCYENRR-RLLLVLAKEYDLNRTQVCELIKQYLGVLGEEAQSAGHEEDGVLG 133
DF Y L +R LL LA+ + ++ QV E Q GVL Q E VL
Sbjct: 70 DFVSFYGGLAETAQRAELLGRLARGFGVDHGQVAE---QSAGVLHLRQQ---QREAAVL- 122
Query: 134 SFYRIERNLRHALKPMYEGLFERLNMHPGGLKVLTSLRADILSILAEENIAS--LRALDS 191
+ E LR+AL P Y GLF ++ GG++ L LRAD+L A + + +R ++
Sbjct: 123 --LQAEDRLRYALVPRYRGLFHHISKLDGGVRFLVQLRADLLEAQALKLVEGPDVREMNG 180
Query: 192 YLKEKLGTWLSPAALELHQITWDDPASLLEKIVAYEAVHPISNLLDLKRRLGVGRRCFGY 251
LK L W S L L ++TW P +L+KI EAVHP+ N +D+KRR+G RRC+ +
Sbjct: 181 VLKGMLSEWFSSGFLNLERVTWHSPCEVLQKISEAEAVHPVKNWMDMKRRVGPYRRCYFF 240
Query: 252 LHAAIPGEPLIFIEVALLKNVAQTIQEVLWDDPPIPECEA---TCALFYSISSTQRGLAG 308
H + PGEPL+ + VAL +++ IQ ++ + PP E T A+FYSIS TQ+GL G
Sbjct: 241 SHCSTPGEPLVVLHVALTGDISSNIQAIVKEHPPSETEEKNKITAAIFYSISLTQQGLQG 300
Query: 309 INLGKFLIKRVITLVKRDMPHISTFATISPIPGFIQWLLSKLASQSKLAEVNDISQSSAD 368
+ LG FLIKRV+ ++R+ PH+ F+++SPIPGF +WLL L SQ+K N++ S
Sbjct: 301 VELGTFLIKRVVKELQREFPHLGVFSSLSPIPGFTKWLLGLLNSQTKEHGRNELFTDSEC 360
Query: 369 RSGSAFRENILEPEEEKALMDLSEEFVAGKNGMERMLNLLTSKNHEWSNFAPLLSILKTP 428
+ S E G + L LL S + EW L+ L+TP
Sbjct: 361 KEIS--------------------EITGGP--INETLKLLLSSS-EWVQSEKLVRALQTP 397
Query: 429 LLRLCARYLLQEKKRGKALDSVANFHLQNGAMIERINWMADRSENGLHQSAGIMVNYVYR 488
L+RLCA YL EK RG AL+ VANFHLQNGA++ RINWMAD S G+ S G+M NY Y
Sbjct: 398 LMRLCAWYLYGEKHRGYALNPVANFHLQNGAVLWRINWMADVSLRGITGSCGLMANYRYF 457
Query: 489 LENIEEYAQSYFSTGQIHASDDVCRYV 515
LE + SY + I AS+ V V
Sbjct: 458 LEETGPNSTSYLGSKIIKASEQVLSLV 484
>sp|Q920F5|DCMC_RAT Malonyl-CoA decarboxylase, mitochondrial OS=Rattus norvegicus
GN=Mlycd PE=2 SV=1
Length = 492
Score = 288 bits (738), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 177/447 (39%), Positives = 246/447 (55%), Gaps = 38/447 (8%)
Query: 75 DFSEGYFSLCYENRR-RLLLVLAKEYDLNRTQVCELIKQYLGVLGEEAQSAGHEEDGVLG 133
DF Y L +R LL LA+ + ++ QV E Q GVL QS E VL
Sbjct: 69 DFVSFYGGLAEAAQRAELLGRLAQGFGVDHGQVAE---QSAGVLQLRQQS---REAAVL- 121
Query: 134 SFYRIERNLRHALKPMYEGLFERLNMHPGGLKVLTSLRADILSILAEENIAS--LRALDS 191
+ E LR+AL P Y GLF ++ GG++ L LRAD+L A + + +R ++
Sbjct: 122 --LQAEDRLRYALVPRYRGLFHHISKLDGGVRFLVQLRADLLEAQALKLVEGPHVREMNG 179
Query: 192 YLKEKLGTWLSPAALELHQITWDDPASLLEKIVAYEAVHPISNLLDLKRRLGVGRRCFGY 251
LK L W S L L ++TW P +L+KI EAVHP+ N +D+KRR+G RRC+ +
Sbjct: 180 VLKSMLSEWFSSGFLNLERVTWHSPCEVLQKISECEAVHPVKNWMDMKRRVGPYRRCYFF 239
Query: 252 LHAAIPGEPLIFIEVALLKNVAQTIQEVLWDDPPIPECEA---TCALFYSISSTQRGLAG 308
H + PG+PL+ + VAL +++ IQ ++ + PP E A+FYSIS TQ+GL G
Sbjct: 240 SHCSTPGDPLVVLHVALTGDISNNIQSIVKECPPSETEEKNRIAAAVFYSISLTQQGLQG 299
Query: 309 INLGKFLIKRVITLVKRDMPHISTFATISPIPGFIQWLLSKLASQSKLAEVNDISQSSAD 368
+ LG FLIKRV+ ++++ PH+ F+++SPIPGF +WLL L Q K N++ S
Sbjct: 300 VELGTFLIKRVVKELQKEFPHLGAFSSLSPIPGFTKWLLGLLNVQGKEYGRNELFTDSEC 359
Query: 369 RSGSAFRENILEPEEEKALMDLSEEFVAGKNGMERMLNLLTSKNHEWSNFAPLLSILKTP 428
+ +++E V G E + LL+S EW+ L L+ P
Sbjct: 360 K-------------------EIAE--VTGDPVHESLKGLLSSG--EWAKSEKLAQALQGP 396
Query: 429 LLRLCARYLLQEKKRGKALDSVANFHLQNGAMIERINWMADRSENGLHQSAGIMVNYVYR 488
L+RLCA YL EK RG AL+ VANFHLQNGA++ RINWMAD S GL S G+MVNY Y
Sbjct: 397 LMRLCAWYLYGEKHRGYALNPVANFHLQNGAVMWRINWMADSSLKGLTSSCGLMVNYRYY 456
Query: 489 LENIEEYAQSYFSTGQIHASDDVCRYV 515
LE + SY + I AS+ + V
Sbjct: 457 LEETGPNSISYLGSKNIKASEQILSLV 483
>sp|Q99J39|DCMC_MOUSE Malonyl-CoA decarboxylase, mitochondrial OS=Mus musculus GN=Mlycd
PE=2 SV=1
Length = 492
Score = 286 bits (731), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 176/447 (39%), Positives = 242/447 (54%), Gaps = 38/447 (8%)
Query: 75 DFSEGYFSLCYENRR-RLLLVLAKEYDLNRTQVCELIKQYLGVLGEEAQSAGHEEDGVLG 133
DF Y L ++R LL LA+ + ++ QV E Q GVL Q+ E VL
Sbjct: 69 DFVSFYGGLAEASQRAELLGRLAQGFGVDHGQVAE---QSAGVLQLRQQA---REAAVL- 121
Query: 134 SFYRIERNLRHALKPMYEGLFERLNMHPGGLKVLTSLRADILSILAEENIAS--LRALDS 191
+ E LR+AL P Y GLF ++ GG++ L LRAD+L A + + +R ++
Sbjct: 122 --LQAEDRLRYALVPRYRGLFHHISKLDGGVRFLVQLRADLLEAQALKLVEGPHVREMNG 179
Query: 192 YLKEKLGTWLSPAALELHQITWDDPASLLEKIVAYEAVHPISNLLDLKRRLGVGRRCFGY 251
LK L W S L L ++TW P +L+KI EAVHP+ N +D+KRR+G RRC+ +
Sbjct: 180 VLKSMLSEWFSSGFLNLERVTWHSPCEVLQKISECEAVHPVKNWMDMKRRVGPYRRCYFF 239
Query: 252 LHAAIPGEPLIFIEVALLKNVAQTIQEVLWDDPPIPECE---ATCALFYSISSTQRGLAG 308
H + PGEPL+ + VAL +++ IQ ++ + PP E A+FYSIS TQ+GL G
Sbjct: 240 SHCSTPGEPLVVLHVALTGDISNNIQGIVKECPPTETEERNRIAAAIFYSISLTQQGLQG 299
Query: 309 INLGKFLIKRVITLVKRDMPHISTFATISPIPGFIQWLLSKLASQSKLAEVNDISQSSAD 368
+ LG FLIKRV+ ++++ P + F+++SPIPGF +WLL L Q K N++ S
Sbjct: 300 VELGTFLIKRVVKELQKEFPQLGAFSSLSPIPGFTKWLLGLLNVQGKEHGRNELFTDSEC 359
Query: 369 RSGSAFRENILEPEEEKALMDLSEEFVAGKNGMERMLNLLTSKNHEWSNFAPLLSILKTP 428
+ SA V G E + L+S EW L L+ P
Sbjct: 360 QEISA---------------------VTGNPVHESLKGFLSSG--EWVKSEKLTQALQGP 396
Query: 429 LLRLCARYLLQEKKRGKALDSVANFHLQNGAMIERINWMADRSENGLHQSAGIMVNYVYR 488
L+RLCA YL EK RG AL+ VANFHLQNGA++ RINWMAD S GL S G+MVNY Y
Sbjct: 397 LMRLCAWYLYGEKHRGYALNPVANFHLQNGAVMWRINWMADSSLKGLTSSCGLMVNYRYY 456
Query: 489 LENIEEYAQSYFSTGQIHASDDVCRYV 515
LE + SY + I AS+ + V
Sbjct: 457 LEETGPNSISYLGSKNIKASEQILSLV 483
>sp|P12617|DCMC_ANSAN Malonyl-CoA decarboxylase, mitochondrial OS=Anser anser anser
GN=MLYCD PE=1 SV=2
Length = 504
Score = 283 bits (724), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 170/453 (37%), Positives = 250/453 (55%), Gaps = 38/453 (8%)
Query: 75 DFSEGYFSLCYENRR-RLLLVLAKEYDLNRTQVCELIKQYLGVLGEEAQSAGHEEDGVLG 133
+F Y L +RR LL LA+++ + +V E + L E++ G
Sbjct: 81 EFVRYYRGLEAGSRRAELLGCLARDFGADHGRVAEFSAKVL---------QAREQEREQG 131
Query: 134 SFYRIERNLRHALKPMYEGLFERLNMHPGGLKVLTSLRADILSILAEENIAS--LRALDS 191
+ + E +R+ L P Y LF+ L GGL+ L LR D++ LA + + ++ +
Sbjct: 132 ALLQAEDRVRYYLTPRYRALFQHLGRLEGGLRFLVELRGDLVEGLAAKAVDGPHVKEMSG 191
Query: 192 YLKEKLGTWLSPAALELHQITWDDPASLLEKIVAYEAVHPISNLLDLKRRLGVGRRCFGY 251
LK L W S L L ++TW P +L+KI EAVHP+ N +DLKRR+G RRC+ +
Sbjct: 192 VLKNMLSEWFSTGFLNLERVTWQSPCEVLQKISDSEAVHPVRNWVDLKRRVGPYRRCYFF 251
Query: 252 LHAAIPGEPLIFIEVALLKNVAQTIQEVLWDDPPIPECEA---TCALFYSISSTQRGLAG 308
H AIPGEPLI + VAL +++ +IQ ++ D + +A T A+FYSIS Q+GL G
Sbjct: 252 SHCAIPGEPLIILHVALTSDISSSIQSIVKDVESLETEDAEKITTAIFYSISLAQQGLQG 311
Query: 309 INLGKFLIKRVITLVKRDMPHISTFATISPIPGFIQWLLSKLASQSKLAEVNDISQSSAD 368
+ LG LIKRV+ +++D+P I F+++SPIPGF +WL+ L+SQ+K N++ S
Sbjct: 312 VELGNHLIKRVVKELQKDLPQIEAFSSLSPIPGFTKWLVGLLSSQTKELGRNELFTES-- 369
Query: 369 RSGSAFRENILEPEEEKALMDLSEEFVAGKNGMERMLNLLTSKNHEWSNFAPLLSILKTP 428
E + + +++E+ + E + LLT N EW L+ L +P
Sbjct: 370 --------------ERQEISEITED-----STTETLKKLLT--NSEWVKSEKLVKALHSP 408
Query: 429 LLRLCARYLLQEKKRGKALDSVANFHLQNGAMIERINWMADRSENGLHQSAGIMVNYVYR 488
L+RLCA YL EK RG AL+ VANFHLQNGA + RINWM D S G+ S G+MVNY Y
Sbjct: 409 LMRLCAWYLYGEKHRGYALNPVANFHLQNGAELWRINWMGDTSPRGIAASCGMMVNYRYF 468
Query: 489 LENIEEYAQSYFSTGQIHASDDVCRYVEPLNEH 521
LE+ + +Y T I AS+ V +V ++
Sbjct: 469 LEDTASNSAAYLGTKHIKASEQVLSFVSQFQQN 501
>sp|Q920A5|RISC_MOUSE Retinoid-inducible serine carboxypeptidase OS=Mus musculus
GN=Scpep1 PE=2 SV=2
Length = 452
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 15/142 (10%)
Query: 336 ISPIPGFIQW---LLS-KLASQSKLAEVNDISQSSADRSGSAFRENILEPEEEKALMDLS 391
ISP+ + W L S L LAEV+DI++ D F + E L +
Sbjct: 203 ISPVDSVLSWGPYLYSMSLLDNQGLAEVSDIAEQVLDAVNKGFYK------EATQLWGKA 256
Query: 392 EEFVAGKNGMERMLNLLTSKNHEWSNFAPLLSILKTPLLRLCARYLLQEKKRGKALDSVA 451
E + N+LT + E L L++PL+RLC R++ +G AL +
Sbjct: 257 EMIIEKNTDGVNFYNILTKSSPE-KAMESSLEFLRSPLVRLCQRHV--RHLQGDALSQLM 313
Query: 452 NFHLQNGAMI--ERINWMADRS 471
N ++ I E I+W A S
Sbjct: 314 NGPIKKKLKIIPEDISWGAQAS 335
>sp|Q29AE5|COPG_DROPS Coatomer subunit gamma OS=Drosophila pseudoobscura pseudoobscura
GN=gammaCop PE=3 SV=1
Length = 878
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 83/221 (37%), Gaps = 36/221 (16%)
Query: 120 EAQSAGHEED-----GVLGSFYRIERNLRHALKPMYEGLFERLNMHPGGLKVLTSLRADI 174
EAQ A + ++ LG Y I ++ R A+ + L P + +L + +
Sbjct: 180 EAQEAMNSDNIMVQYHALGLLYHIRKSDRLAVSKLVNKLTRSSLKSPYAVCMLIRIACKL 239
Query: 175 LSILAEENIASLRALDSYLKEKLGTWLSPAALELHQITWDDPASLLEKIVAYEAVHPISN 234
+ EE+I S DS L + T L H+ ++V YEA H I N
Sbjct: 240 IE---EEDIPSEELSDSPLFTFIETCLR------HK----------SEMVIYEAAHAIVN 280
Query: 235 LLDLKRRLGVGRRCFGYLHAAIPGEPLIFIEVALLKNVAQTIQEVLWDDPPIPECEATCA 294
L + R+ L + P L F V L VA T P TC
Sbjct: 281 LKNTNHRMLSPAFSILQLFCSSPKATLRFAAVRTLNKVAMT----------HPAAVTTCN 330
Query: 295 LFYS--ISSTQRGLAGINLGKFLIKRVITLVKRDMPHISTF 333
L I+ + R +A + + L + V+R M ISTF
Sbjct: 331 LDLEGLITDSNRSVATLAITTLLKTGAESSVERLMKQISTF 371
>sp|Q6GJB7|HCHA_STAAR Molecular chaperone Hsp31 and glyoxalase 3 OS=Staphylococcus aureus
(strain MRSA252) GN=hchA PE=3 SV=1
Length = 292
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 65/161 (40%), Gaps = 14/161 (8%)
Query: 203 PAALELHQITWDDPASLLEKIVAYEAVHPISNLLD-LKRRLGVGRRCFGYLHAAIPGEPL 261
PA LEL + +D A + E + L D +K LG YL IPG
Sbjct: 105 PAKLELWAMPTEDEAVISTYNKLKEKLKQPKKLADVIKNELGPDSD---YLSVFIPGGHA 161
Query: 262 IFIEVALLKNVAQTIQEVLWDDPPIPE-CEATCALFYSISSTQRGLAGINLGKFLIKRVI 320
+ ++ ++V QT+ L +D I C AL AG+N K ++
Sbjct: 162 AVVGISESEDVQQTLDWALENDRFIVTLCHGPAALLS---------AGLNREKSPLEGYS 212
Query: 321 TLVKRDMPHISTFATISPIPGFIQWLLSKLASQSKLAEVND 361
V D I +PG ++WL++ L ++ L VND
Sbjct: 213 VCVFPDSLDEGANIEIGYLPGRLKWLVADLLTKQSLKVVND 253
>sp|Q75BE5|ATG14_ASHGO Autophagy-related protein 14 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ATG14 PE=3
SV=1
Length = 308
Score = 33.1 bits (74), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 30/146 (20%)
Query: 80 YFSLCYENRRRLLLVLAKEYDLNRTQVCELIKQYLGVLGEEAQSAGHEEDGVLGS----- 134
Y + C +L+L Y L TQ+CE + + ++ ++A E++G+LG
Sbjct: 14 YCAHCVNTSPKLIL----RYKLELTQICEEVTEMRDIVTSTLENAISEKEGLLGKHMERL 69
Query: 135 ----FYRIERNLRHALKPMYEGLFERLNMHPGGLKVLTSLRADILSILAE---------- 180
R L H + + + L +L+ G + L L D+ + AE
Sbjct: 70 QHLRLKRYNARLSHRARELEQHLDSKLSRRDGLRRALKQLSPDVAVVPAEDPDEYRELRH 129
Query: 181 -----ENIASLRALDSYLKEKLGTWL 201
+N+ S+++ + E+L W
Sbjct: 130 KLTLLQNVVSMKSTQKF--EELCQWF 153
>sp|Q920A6|RISC_RAT Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus
GN=Scpep1 PE=2 SV=1
Length = 452
Score = 33.1 bits (74), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 18/148 (12%)
Query: 336 ISPIPGFIQW---LLS-KLASQSKLAEVNDISQSSADRSGSAFRENILEPEEEKALMDLS 391
ISP+ + W L S L LAEV+DI++ + F + E L +
Sbjct: 203 ISPVDSVLSWGPYLYSVSLLDNKGLAEVSDIAEQVLNAVNKGFYK------EATQLWGKA 256
Query: 392 EEFVAGKNGMERMLNLLTSKNHEWSNFAPLLSILKTPLLRLCARYLLQEKKRGKALDSVA 451
E + N+LT + ++ L ++PL+RLC R++ +G AL
Sbjct: 257 EMIIEKNTDGVNFYNILTKSTPD-TSMESSLEFFRSPLVRLCQRHV--RHLQGDALS--- 310
Query: 452 NFHLQNGAMIERINWMADRSENGLHQSA 479
L NG + +++ + D G S+
Sbjct: 311 --QLMNGPIKKKLKIIPDDVSWGAQSSS 336
>sp|Q10411|SPO15_SCHPO Sporulation-specific protein 15 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=spo15 PE=1 SV=1
Length = 1957
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 63/138 (45%), Gaps = 22/138 (15%)
Query: 79 GYFSLCYENRRRLLLVLAKEYDLNRTQVCELIKQYLGVLGEEAQ-SAGHEEDGVLGSFYR 137
G SL +N R L V + D TQ+ EL K Y + E AQ ++G L S
Sbjct: 860 GKLSLDLKNLRSSLNVAISDNDQILTQLAELSKNYDSLEQESAQLNSG------LKSL-E 912
Query: 138 IERNLRHALKPMYEGLFERLNMHPGGLKVLTSLRADI----------LSILAEENIASLR 187
E+ L H E L RL+ G LK+ S +D+ +S L EEN++ +
Sbjct: 913 AEKQLLH---TENEELHIRLDKLTGKLKIEESKSSDLGKKLTARQEEISNLKEENMSQSQ 969
Query: 188 ALDSYLKEKLGTWLSPAA 205
A+ S +K KL LS ++
Sbjct: 970 AITS-VKSKLDETLSKSS 986
>sp|A5G693|ERA_GEOUR GTPase Era OS=Geobacter uraniireducens (strain Rf4) GN=era PE=3
SV=1
Length = 297
Score = 32.7 bits (73), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 167 LTSLR-ADILSILAEENIASLRALDSYLKEKLGTWLSPAALELHQITWDDPASLLEKIVA 225
L+S++ D++ L E + A + + E L +P L +++I +LLE+I A
Sbjct: 82 LSSIKEVDVILFLVEAD-AKPANQEGMILELLANADAPVLLVINKIDLVAKEALLERIAA 140
Query: 226 YEAVHPISNLLDLKRRLGVG-RRCFGYLHAAIPGEPLIF 263
Y A++P ++ + G G R +H IP P F
Sbjct: 141 YAALYPFREIVPVSALSGDGVERLVEVVHGFIPAGPPYF 179
>sp|Q2YSB0|HCHA_STAAB Molecular chaperone Hsp31 and glyoxalase 3 OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=hchA PE=3 SV=1
Length = 292
Score = 32.7 bits (73), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 14/161 (8%)
Query: 203 PAALELHQITWDDPASLLEKIVAYEAVHPISNLLD-LKRRLGVGRRCFGYLHAAIPGEPL 261
PA LEL + +D A + E + L D +K LG YL IPG
Sbjct: 105 PAKLELWAMPTEDEAVITTYNKLKEKLKQPKKLADVIKNELGPDSD---YLSVFIPGGHA 161
Query: 262 IFIEVALLKNVAQTIQEVLWDDPPIPE-CEATCALFYSISSTQRGLAGINLGKFLIKRVI 320
+ ++ ++V +T+ L +D I C AL AG+N K ++
Sbjct: 162 AVVGISESEDVQKTLDWALENDRFIVTLCHGPAALLS---------AGLNREKSPLEGYS 212
Query: 321 TLVKRDMPHISTFATISPIPGFIQWLLSKLASQSKLAEVND 361
V D I +PG ++WL+++L ++ L VND
Sbjct: 213 VCVFPDSLDEGANIEIGYLPGRLKWLVAELLTKQGLKVVND 253
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191,585,405
Number of Sequences: 539616
Number of extensions: 7885655
Number of successful extensions: 19355
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 19333
Number of HSP's gapped (non-prelim): 36
length of query: 529
length of database: 191,569,459
effective HSP length: 122
effective length of query: 407
effective length of database: 125,736,307
effective search space: 51174676949
effective search space used: 51174676949
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)