BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037120
(489 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus
purpuratus GN=KATNB1 PE=1 SV=1
Length = 690
Score = 40.8 bits (94), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 27/145 (18%)
Query: 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKT----RRSVTVVGSDVQKG 213
+D+V++N + +E+ A ++S + IYD+ EP ++++T R S+ + D
Sbjct: 62 VDSVKFN--SSEELVVAGSQSGTMKIYDL-----EPAKIVRTLTGHRNSIRCM--DFHPF 112
Query: 214 LSDLAFSAVNTSRLIASDTHGVVNIWD-RRVGVLPSLELSTGSHGTLNSIQLHAENQIIF 272
+A + +T+ V +WD RR G + + + G +N I+ + + +
Sbjct: 113 GEFVASGSTDTN----------VKLWDVRRKGCIYTYK---GHSDQVNMIKFSPDGKWLV 159
Query: 273 AAGKHGSIYLWDLRGGRTSAPFHNH 297
A + +I LWDL G+ F NH
Sbjct: 160 TASEDTTIKLWDLTMGKLFQEFKNH 184
>sp|O74453|SKB15_SCHPO Shk1 kinase-binding protein 15 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=skb15 PE=4 SV=1
Length = 341
Score = 40.0 bits (92), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 9/121 (7%)
Query: 174 ASTRSNVVSIYDIGYISDEPVEVLKTRRSVTV----VGSDVQKG-LSDLAFSAVNTSRLI 228
A T V IY SDE +++ R+V + V +D+ + D+ F+ + L+
Sbjct: 37 ALTALAVDGIYLASTSSDETIKIFDHTRNVQIADVSVPTDIANACIRDMCFTK---NHLL 93
Query: 229 ASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGG 288
A +G +++W + +L L + SH + I +H ++ G G + LWDL G
Sbjct: 94 ACHDNGQISMWSKGSWLLVH-TLKSSSHKGITGIAVHPSEKLALTVGGDGKLRLWDLVRG 152
Query: 289 R 289
+
Sbjct: 153 K 153
>sp|Q9BQ67|GRWD1_HUMAN Glutamate-rich WD repeat-containing protein 1 OS=Homo sapiens
GN=GRWD1 PE=1 SV=1
Length = 446
Score = 40.0 bits (92), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 5/132 (3%)
Query: 212 KGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGS--HGTLNSIQLHAENQ 269
+ + DL +S + + + IWD R + L+T + G +N I
Sbjct: 262 RSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRREP 321
Query: 270 IIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHL-PLTSLKLASMLEKIGTLKAQSKIVS 328
+ + G G++ +WDLR ++ +P K+ H+ P+TS++ + ++
Sbjct: 322 FLLSGGDDGALKIWDLRQFKSGSPVATFKQ--HVAPVTSVEWHPQDSGVFAASGADHQIT 379
Query: 329 QEIHSIDLDPSC 340
Q +++ DP
Sbjct: 380 QWDLAVERDPEA 391
>sp|Q6FLI3|CAF4_CANGA CCR4-associated factor 4 homolog OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CAF4 PE=3 SV=1
Length = 579
Score = 39.7 bits (91), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 227 LIASDTHGVVNIWDRRVG-VLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDL 285
L+ G+V +WD R+G V+ SLE G G + S++ I + K S +WDL
Sbjct: 448 LVTGTKDGIVYLWDLRIGRVVGSLE---GHRGPITSLKYMGSELITGSMDK--STRIWDL 502
Query: 286 RGGRTSAPFHNHKEVCHLPLTSLKLASMLE 315
R G + KEV + + +L + LE
Sbjct: 503 RMGSVAELLSFEKEVVSVEESQTQLINALE 532
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 271 IFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQE 330
+ K G +YLWDLR GR H+ P+TSLK G++ ++I
Sbjct: 448 LVTGTKDGIVYLWDLRIGRVVGSLEGHRG----PITSLKYMGSELITGSMDKSTRIWDLR 503
Query: 331 IHSI 334
+ S+
Sbjct: 504 MGSV 507
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 39.3 bits (90), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 223 NTSRLIASDTHGV-VNIWDRRVGVLPSLELSTGSHGT-LNSIQLHAENQIIFAAGKHGSI 280
+T RL+A+ VN+W P+ +S H T + S+Q+ A+ ++I A + GSI
Sbjct: 31 STGRLLATGGDDCRVNVWSVNK---PNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSI 87
Query: 281 YLWDLRGGRTSAPFHNHK-EVCHL 303
+WDL + HK +C L
Sbjct: 88 RVWDLEAAKILRTLLGHKANICSL 111
>sp|Q803V5|LST8_DANRE Target of rapamycin complex subunit lst8 OS=Danio rerio GN=mlst8
PE=2 SV=1
Length = 326
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 10/70 (14%)
Query: 223 NTSRLIASDTHGVVNIWDRRVG----VLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHG 278
N + LI D GV++IWD + ++P ++S +NS+ + + + A G
Sbjct: 139 NQAELIVGDQSGVIHIWDLKTDHNEQLIPEPDVS------VNSVHIDPDASYMAAVNSSG 192
Query: 279 SIYLWDLRGG 288
+ Y+W+L GG
Sbjct: 193 NCYVWNLAGG 202
>sp|P0CS44|MDV1_CRYNJ Mitochondrial division protein 1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=MDV1 PE=3 SV=1
Length = 757
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 18/103 (17%)
Query: 227 LIASDTHGVVNIWD----RRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYL 282
L+ + VV +WD +G L G GT+ ++Q+ E+ + G G++ L
Sbjct: 370 LVTAGQDDVVKVWDLCDGEEIGQL------RGHRGTVKALQV--EDTLCLTGGADGNVRL 421
Query: 283 WDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSK 325
WDLR +++E H L L LE+I +A +
Sbjct: 422 WDLR------MVEDYEERLHTQLAELARQDPLERIAEQRAHEE 458
>sp|P0CS45|MDV1_CRYNB Mitochondrial division protein 1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=MDV1 PE=3 SV=1
Length = 757
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 18/103 (17%)
Query: 227 LIASDTHGVVNIWD----RRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYL 282
L+ + VV +WD +G L G GT+ ++Q+ E+ + G G++ L
Sbjct: 370 LVTAGQDDVVKVWDLCDGEEIGQL------RGHRGTVKALQV--EDTLCLTGGADGNVRL 421
Query: 283 WDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSK 325
WDLR +++E H L L LE+I +A +
Sbjct: 422 WDLR------MVEDYEERLHTQLAELARQDPLERIAEQRAHEE 458
>sp|A4RD35|SEC31_MAGO7 Protein transport protein SEC31 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=SEC31 PE=3 SV=1
Length = 1269
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 166 ANQDEVACASTRSNVVSIYDIG----YISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSA 221
A D++ C + V I G +++ V LKTR++ + ++ +K +S +A+
Sbjct: 165 ARSDDLECVAWNRKVPHILATGGSGGFVT---VWDLKTRKASLTL-NNSRKAVSAIAWDP 220
Query: 222 VNTSRLIAS---DTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHG 278
N+++L+ + DT V+ +WD R P L G L+ ++ ++ + GK
Sbjct: 221 NNSTKLLTATPDDTMPVIFLWDLRNSNAPERTLQGHEQGVLSVSWCQQDSDLLISCGKDN 280
Query: 279 SIYLWDLRGGRTSAPF 294
+W+ + G F
Sbjct: 281 RTIVWNPQTGERYGEF 296
>sp|P22219|VPS15_YEAST Serine/threonine-protein kinase VPS15 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=VPS15 PE=1 SV=4
Length = 1454
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 62/152 (40%), Gaps = 11/152 (7%)
Query: 227 LIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSI---QLHAENQIIFAAGKHGS-IYL 282
LI T G+++IWD R VL S G H + + Q + +N +I G + + +
Sbjct: 1246 LILGTTRGIIDIWDIRFNVLIR-SWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTI 1304
Query: 283 WDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEK-----IGTLKAQSKIVSQEIHSIDLD 337
W+ G F N E + L + LE+ I +L A S I + D
Sbjct: 1305 WNFVKGHCQYAFINSDEQPSME-HFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTD 1363
Query: 338 PSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCP 369
+ S + F L++ S + SR S V P
Sbjct: 1364 EATSSIVMFSLNELSSSKAVISPSRFSDVFIP 1395
>sp|Q54E33|WDR92_DICDI WD repeat-containing protein 92 homolog OS=Dictyostelium discoideum
GN=wdr92 PE=4 SV=1
Length = 357
Score = 37.4 bits (85), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 226 RLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDL 285
+ I D +G ++ WD + +P + G++++I +A+N ++ GK G+I ++D
Sbjct: 104 KFITGDFNGQISEWDSDICDIPIWGVKGAHQGSISAIDAYADN-LVVCGGKDGTIKVYDT 162
Query: 286 R 286
R
Sbjct: 163 R 163
>sp|P42841|PFS2_YEAST Polyadenylation factor subunit 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PFS2 PE=1 SV=1
Length = 465
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 212 KGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQII 271
+ + D+AFS+ N S+ + ++ IW+ G + +G H + S H E +I
Sbjct: 178 ESIRDMAFSS-NDSKFVTCSDDNILKIWNFSNG--KQERVLSGHHWDVKSCDWHPEMGLI 234
Query: 272 FAAGKHGSIYLWDLRGG 288
+A K + LWD R G
Sbjct: 235 ASASKDNLVKLWDPRSG 251
>sp|O59894|PEX7_PICPA Peroxisomal targeting signal 2 receptor OS=Komagataella pastoris
GN=PEX7 PE=3 SV=1
Length = 376
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 33/177 (18%)
Query: 160 AVRWNLANQDEVACAST---------RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDV 210
AVR++ +++A A++ R V+SI D G I +T + D
Sbjct: 13 AVRYSPFYDNKIAVATSANYGLVGNGRLYVLSIMDDGNI-------------ITDISYDT 59
Query: 211 QKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQI 270
Q GL +A+S N + ++ S G V+++D + P ++ + + + + +
Sbjct: 60 QDGLFGVAWSETNENHVLTSSGDGCVSLFDTTLKDYPVMKFTEHQREVFSVDWSNIDKNL 119
Query: 271 IFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIV 327
+A GS+ +W R ++ LT LAS EK G ++ +V
Sbjct: 120 FCSASWDGSVKVWSPGSNRNTS-----------LLTLRSLASREEKTGRIEKPIPVV 165
>sp|Q6NLV4|FY_ARATH Flowering time control protein FY OS=Arabidopsis thaliana GN=FY
PE=1 SV=1
Length = 647
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 211 QKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHG-TLNSIQLHAENQ 269
++ + DL+F + SD V +WD V E S HG + S+ H
Sbjct: 207 KESIRDLSFCKTDLKFCSCSDD-TTVKVWDFTKCVD---ESSLTGHGWDVKSVDWHPTKS 262
Query: 270 IIFAAGKHGSIYLWDLRGGRTSAPFHNHKEV 300
++ + GK + LWD R GR H HK +
Sbjct: 263 LLVSGGKDQLVKLWDTRSGRELCSLHGHKNI 293
>sp|C4YPI7|LIS1_CANAW Nuclear distribution protein PAC1 OS=Candida albicans (strain WO-1)
GN=PAC1 PE=3 SV=1
Length = 486
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 212 KGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLH-AENQI 270
+ ++ + F+ L + + IWD + + +L G T++SIQ +N I
Sbjct: 167 RAINKICFTYKKPYYLATCSSDLTIKIWDEKFNHIRTL---NGHEHTVSSIQFSPVDNSI 223
Query: 271 IFAAGKHGSIYLWDLRGGRTSAPFHNHKEVC 301
+++ + +I +WD+ G + F H E C
Sbjct: 224 LYSVSRDKNIRVWDIFQGISLKSFVGHSEWC 254
>sp|Q5A7Q6|LIS1_CANAL Nuclear distribution protein PAC1 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=PAC1 PE=3 SV=1
Length = 486
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 212 KGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLH-AENQI 270
+ ++ + F+ L + + IWD + + +L G T++SIQ +N I
Sbjct: 167 RAINKICFTYKKPYYLATCSSDLTIKIWDEKFNHIRTL---NGHEHTVSSIQFSPVDNSI 223
Query: 271 IFAAGKHGSIYLWDLRGGRTSAPFHNHKEVC 301
+++ + +I +WD+ G + F H E C
Sbjct: 224 LYSVSRDKNIRVWDIFQGISLKSFVGHSEWC 254
>sp|B9WD30|LIS1_CANDC Nuclear distribution protein PAC1 OS=Candida dubliniensis (strain
CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL
Y-17841) GN=PAC1 PE=3 SV=1
Length = 489
Score = 37.0 bits (84), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 212 KGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHA-ENQI 270
+ ++ + F+ L + + IWD + + +L G T++SIQ +N I
Sbjct: 167 RAINKICFTYKKPYYLATCSSDLTIKIWDEKFNHIRTL---NGHEHTVSSIQFSPIDNSI 223
Query: 271 IFAAGKHGSIYLWDLRGGRTSAPFHNHKEVC 301
+++ + +I +WD+ G + F H E C
Sbjct: 224 LYSVSRDKNIRVWDIFQGISLKSFVGHSEWC 254
>sp|Q7RY68|PFS2_NEUCR Polyadenylation factor subunit 2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=pfs-2 PE=3 SV=2
Length = 660
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 214 LSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHG-TLNSIQLHAENQIIF 272
+ DLAFS +T + ASD + ++D G S +++ HG S H +I
Sbjct: 182 IRDLAFSPNDTKFVTASDDQ-TLKVFDFAGG---STDMTLTGHGWDAKSCDWHPSRGLIV 237
Query: 273 AAGKHGSIYLWDLRGGRTSAPFHNHKEVC 301
+ K + LWD R GR H HK
Sbjct: 238 SGSKDHLVKLWDPRTGRCLTTLHGHKNTI 266
>sp|Q6FJS0|PFS2_CANGA Polyadenylation factor subunit 2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=PFS2 PE=3 SV=1
Length = 455
Score = 36.6 bits (83), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 212 KGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQII 271
+G+ D+AFS N S+ + ++ IW+ G + +G H + S H E +I
Sbjct: 167 EGIRDVAFSN-NDSKFVTCSDDNILKIWNFSNGQ--QERVLSGHHWDVRSCDWHPELGLI 223
Query: 272 FAAGKHGSIYLWDLRGGR 289
+ K + LWD R G+
Sbjct: 224 VSGSKDNLVKLWDPRSGQ 241
>sp|A3GFK8|SEC31_PICST Protein transport protein SEC31 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=SEC31 PE=3 SV=2
Length = 1244
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 227 LIASDTHGVVNIWDRRVGVL------PSLELSTGSHGTLNSIQLHA-ENQIIFAAGKHGS 279
+ A+ +GV+ WD V ++ S+ S+ G + S+Q + ++ ++ + G HG
Sbjct: 83 IAAAFENGVIEFWDAEVLIISKDLAKASVHKSSKHSGPVRSLQFNPLQSHVLVSGGSHGQ 142
Query: 280 IYLWDLRGGRTSAPF 294
I++WD + + + PF
Sbjct: 143 IFIWDTK--KFTEPF 155
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 17/95 (17%)
Query: 217 LAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGT-LNSIQLHAENQ----II 271
L F+ + + L++ +HG + IWD + P S GS T ++ I A N I+
Sbjct: 124 LQFNPLQSHVLVSGGSHGQIFIWDTKKFTEP---FSPGSAMTPMDEISSVAWNNSVSHIL 180
Query: 272 FAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLT 306
+ G G +WDL+ R EV HL T
Sbjct: 181 ASTGNSGYTSIWDLKSKR---------EVLHLSYT 206
Score = 32.7 bits (73), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 18/139 (12%)
Query: 157 QLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSV---TVVGSDVQKG 213
++ +V WN + + ++ S SI+D LK++R V + G+ +
Sbjct: 166 EISSVAWN-NSVSHILASTGNSGYTSIWD-----------LKSKREVLHLSYTGASGRAN 213
Query: 214 LSDLAFSAVNTSRLI-ASDTHG--VVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQI 270
S +A+ ++ LI ASD ++ WD R P L G L+ + ++
Sbjct: 214 FSHVAWHPTKSTELITASDNDACPLILTWDLRNSNAPEKILEGHKKGVLSLDWCQQDPEL 273
Query: 271 IFAAGKHGSIYLWDLRGGR 289
+ ++GK + +LW+ G+
Sbjct: 274 LISSGKDNTTFLWNPTTGQ 292
>sp|P13712|MSI1_YEAST Chromatin assembly factor 1 subunit p50 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MSI1 PE=1 SV=1
Length = 422
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 22/193 (11%)
Query: 108 GIYLVSATRSGCLTV------HDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAV 161
IY+ T+ G + H FE+ + +G + V + S + + ++
Sbjct: 153 AIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEAMDTSSADI------NEATSL 206
Query: 162 RWNLANQDEVACASTRSN-VVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFS 220
WNL Q E S+ SN V ++DI S E + S+ G+ V +D+ +
Sbjct: 207 AWNL--QQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINSDGTAV----NDVTWM 260
Query: 221 AVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSH-GTLNSIQLHAENQIIFA-AGKHG 278
+ S A V++ D R L+ + H G +NS + + +N +I A A +G
Sbjct: 261 PTHDSLFAACTEGNAVSLLDLRTKK-EKLQSNREKHDGGVNSCRFNYKNSLILASADSNG 319
Query: 279 SIYLWDLRGGRTS 291
+ LWD+R S
Sbjct: 320 RLNLWDIRNMNKS 332
>sp|Q9UTN4|PFS2_SCHPO Polyadenylation factor subunit 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pfs2 PE=4 SV=1
Length = 509
Score = 36.2 bits (82), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 214 LSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHG-TLNSIQLHAENQIIF 272
+ D+AFS N S+ + + G + +W+ + + EL HG + ++ H ++
Sbjct: 167 VRDVAFSP-NDSKFVTASDDGSLKVWNFHMS---TEELKLTGHGWDVKTVDWHPSKGLLA 222
Query: 273 AAGKHGSIYLWDLRGGRTSAPFHNHKEV 300
+ K + WD R G A H HK
Sbjct: 223 SGSKDNLVKFWDPRTGTCIATLHGHKNT 250
>sp|Q58DC2|DCAF4_BOVIN DDB1- and CUL4-associated factor 4 OS=Bos taurus GN=DCAF4 PE=2 SV=1
Length = 494
Score = 36.2 bits (82), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 258 TLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNH-KEVCHLPL 305
+ S+Q+ E Q + A+ G+I LWDLR + + H E HLPL
Sbjct: 371 AVTSVQILQEEQCLMASDMAGTIKLWDLRTTKCIRQYEGHVNEYAHLPL 419
>sp|Q54DS4|Y2056_DICDI WD repeat-containing protein DDB_G0292056 OS=Dictyostelium
discoideum GN=DDB_G0292056 PE=4 SV=1
Length = 1823
Score = 36.2 bits (82), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 19/139 (13%)
Query: 154 LPQQ----LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSD 209
+PQQ + V WN + + VA +S + I+DI + P L + S
Sbjct: 135 IPQQSKWEVGVVDWNSQSPNLVASSSNQDTF--IWDI----ENPKYPLLGQ------FSS 182
Query: 210 VQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAE-- 267
Q+ +SDL++S + + L + VNIWD R S SH L +IQ+
Sbjct: 183 HQRAISDLSWSLFDNNILATTSADSFVNIWDLRTPKKAVKFKSLKSH-ILGAIQVKWNRF 241
Query: 268 NQIIFAAGKHGSIYLWDLR 286
N + A+ + +WD+R
Sbjct: 242 NSNVLASAHESYLMIWDIR 260
>sp|D3TLL6|LIS1_GLOMM Lissencephaly-1 homolog OS=Glossina morsitans morsitans PE=2 SV=1
Length = 411
Score = 36.2 bits (82), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Query: 207 GSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHA 266
GSD +KG F L + + +WD VGV L + TG + + H
Sbjct: 299 GSDNKKGHHQGPF-------LASGSRDKTIRVWD--VGVGLCLFVLTGHDNWVRELTFHP 349
Query: 267 ENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVC 301
+ + +A +I +WDLR R + H+ C
Sbjct: 350 GGKYLVSASDDKTIRVWDLRNKRFMKTLYAHQHFC 384
>sp|Q0J3D9|COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica
GN=Os09g0127800 PE=2 SV=1
Length = 1218
Score = 36.2 bits (82), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 227 LIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLR 286
++AS GV+ +WD R+G L L+ G + + HA + + G I +W+ +
Sbjct: 24 ILASLHSGVIQMWDYRMGTL--LDRFDEHDGPVRGVHFHATQPLFVSGGDDYKIKVWNYK 81
Query: 287 GGRTSAPFHNH 297
R H H
Sbjct: 82 THRCLFTLHGH 92
>sp|Q5ZLG9|WDR59_CHICK WD repeat-containing protein 59 OS=Gallus gallus GN=WDR59 PE=2 SV=1
Length = 973
Score = 36.2 bits (82), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 72/195 (36%), Gaps = 36/195 (18%)
Query: 184 YDIGYISDEPVEVLKTRRSVTVVGSDVQ---KGLSDLAFSAVNTSRLIASDTHGVVNIWD 240
Y S++ V++ K + V + +Q + +SDL +S L+ S + IWD
Sbjct: 75 YYFAASSNQRVDLYKWKEGNGEVCTSLQGHTRVISDLDWSVFEPDLLVTSSVDTYIYIWD 134
Query: 241 RRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEV 300
+ P++ LS + + ++ + +N A G + +WD R T+ +
Sbjct: 135 IKDTRKPTVSLSAVAGAS--QVKWNKKNANCLATSHDGDVRIWDKRKPSTAVEY------ 186
Query: 301 CHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYN 360
LA+ L K IH +D P Y LA D D
Sbjct: 187 ---------LAAHLSK--------------IHGLDWHPDNEYTLATSSQDNSVRFWDYRQ 223
Query: 361 SR--VSHVHCPPPAW 373
R ++ + C P W
Sbjct: 224 PRKYLNILPCQVPVW 238
>sp|Q9AUR8|COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica
GN=Os03g0711400 PE=2 SV=1
Length = 1218
Score = 36.2 bits (82), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 227 LIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLR 286
++AS GV+ +WD R+G L L+ G + + HA + + G I +W+ +
Sbjct: 24 ILASLHSGVIQMWDYRMGTL--LDRFDEHDGPVRGVHFHATQPLFVSGGDDYKIKVWNYK 81
Query: 287 GGRTSAPFHNH 297
R H H
Sbjct: 82 THRCLFTLHGH 92
>sp|Q9AUR7|COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza sativa subsp. japonica
GN=Os03g0711500 PE=2 SV=1
Length = 1218
Score = 36.2 bits (82), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 227 LIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLR 286
++AS GV+ +WD R+G L L+ G + + HA + + G I +W+ +
Sbjct: 24 ILASLHSGVIQMWDYRMGTL--LDRFDEHDGPVRGVHFHATQPLFVSGGDDYKIKVWNYK 81
Query: 287 GGRTSAPFHNH 297
R H H
Sbjct: 82 THRCLFTLHGH 92
>sp|Q6L4F8|GBLPB_ORYSJ Guanine nucleotide-binding protein subunit beta-like protein B
OS=Oryza sativa subsp. japonica GN=RACK1B PE=1 SV=1
Length = 336
Score = 36.2 bits (82), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Query: 239 WDRRVGV--LPSLELST---GSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGR---- 289
WDR V V L + +L T G +G +N++ + + + + GK G+ LWDL G+
Sbjct: 188 WDRSVKVWNLTNCKLRTKLEGHNGYVNAVAVSPDGSLCASGGKDGTTLLWDLTEGKMLYK 247
Query: 290 --TSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEI 331
A H+ +C P A+ + + +SK+V Q++
Sbjct: 248 LDAGAIIHS---LCFSPNRYWLCAATEDSVKIWDLESKLVMQDL 288
>sp|Q6PA72|LST8_XENLA Target of rapamycin complex subunit lst8 OS=Xenopus laevis GN=mlst8
PE=2 SV=1
Length = 326
Score = 36.2 bits (82), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 223 NTSRLIASDTHGVVNIWDRRVG----VLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHG 278
N + LI D G ++IWD + ++P ++S +NS+ + + + A G
Sbjct: 139 NQAELIVGDQSGAIHIWDLKTDQNEQLIPETDVS------INSVHIDPDASYMAAVNSSG 192
Query: 279 SIYLWDLRGG 288
+ ++W+L GG
Sbjct: 193 NCFVWNLTGG 202
>sp|Q5I0B4|LST8_XENTR Target of rapamycin complex subunit lst8 OS=Xenopus tropicalis
GN=mlst8 PE=2 SV=1
Length = 326
Score = 36.2 bits (82), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 223 NTSRLIASDTHGVVNIWDRRVG----VLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHG 278
N + LI D G ++IWD + ++P ++S +NS+ + + + A G
Sbjct: 139 NQAELIVGDQSGAIHIWDLKTDQNEQLIPETDVS------INSVHIDPDASYMAAVNSSG 192
Query: 279 SIYLWDLRGG 288
+ ++W+L GG
Sbjct: 193 NCFVWNLTGG 202
>sp|Q6C709|PRP46_YARLI Pre-mRNA-splicing factor PRP46 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=PRP46 PE=3 SV=2
Length = 441
Score = 35.8 bits (81), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 227 LIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLR 286
L+++ V +WD R P + LS G T+N ++ A + A ++ LW+L+
Sbjct: 231 LVSAGRDAVARVWDIRTRD-PVVVLS-GHKSTINRVKFQASEPQVITASADETVRLWNLQ 288
Query: 287 GGRTSAPFHNHKE 299
G+T +HK+
Sbjct: 289 AGKTMTTLTHHKK 301
>sp|Q5AZM3|SEC31_EMENI Protein transport protein sec31 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=sec31
PE=3 SV=2
Length = 1282
Score = 35.8 bits (81), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 166 ANQDEVACASTRSNVVSIY----DIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSA 221
A D++ C V I G+++ V +KTR+ + + +K +S +A+
Sbjct: 164 ARADDIECLDWNKKVAHILVTGSSAGFVT---VWDVKTRKESLTLNNMGRKAVSAVAWDP 220
Query: 222 VNTSRLIASDTH---GVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHG 278
++L+ + H ++N+WD R P L G L+ + + ++ ++GK
Sbjct: 221 TKPTKLVTATPHESDPIINLWDLRNSHAPERTLRGHEAGVLSLSWCNQDPDLLLSSGKDN 280
Query: 279 SIYLWDLRGG 288
W+ + G
Sbjct: 281 RTICWNPQTG 290
>sp|P53196|RPN14_YEAST 26S proteasome regulatory subunit RPN14 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPN14 PE=1 SV=1
Length = 417
Score = 35.8 bits (81), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 227 LIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLR 286
LI+S + IW + G P + G T+ I + + + +A G+I LW+
Sbjct: 151 LISSSQDMQLKIWSVKDGSNPRTLI--GHRATVTDIAIIDRGRNVLSASLDGTIRLWECG 208
Query: 287 GGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAF 346
G T F N KE H + S+ L +GT + +I + + ++++ Y +A
Sbjct: 209 TGTTIHTF-NRKENPHDGVNSIALF-----VGTDRQLHEISTSKKNNLEFGTYGKYVIAG 262
Query: 347 HLDDGWSGVLDVYN 360
H+ SGV+ V+N
Sbjct: 263 HV----SGVITVHN 272
>sp|Q8NHV4|NEDD1_HUMAN Protein NEDD1 OS=Homo sapiens GN=NEDD1 PE=1 SV=1
Length = 660
Score = 35.8 bits (81), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 213 GLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIF 272
G+S + +S+ N + AS + + + + +P LEL+ G T + L++ + +
Sbjct: 36 GISSICWSSNNNFLVTASSSGDKIVVSSCKCKPVPLLELAEGQKQTC--VNLNSTSMYLV 93
Query: 273 AAGKHGSIYLWDLRGGRTSAPFHNHKE 299
+ G + ++ +WDL+ R +HK+
Sbjct: 94 SGGLNNTVNIWDLKSKRVHRSLKDHKD 120
>sp|Q5BE22|PRP46_EMENI Pre-mRNA-splicing factor prp46 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=prp46
PE=3 SV=1
Length = 452
Score = 35.4 bits (80), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 227 LIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLR 286
L+ GV +WD R ++ + +G GT+ +Q + + ++ LWDL
Sbjct: 242 LVTGGRDGVARVWDMRT--RSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLA 299
Query: 287 GGRTSAPFHNHKE 299
G+T +HK+
Sbjct: 300 AGKTMGVLTHHKK 312
>sp|Q55FJ2|WDR91_DICDI WD repeat-containing protein 91 homolog OS=Dictyostelium discoideum
GN=wdr91 PE=4 SV=1
Length = 766
Score = 35.4 bits (80), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Query: 217 LAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGK 276
A S++N R T GVV W+ R L + E + S +NS+ ++ ++
Sbjct: 564 FATSSINNGR-----TDGVVYTWNLRT--LKTEEKLSSSGAVINSMSFNSTGTLLSTGCV 616
Query: 277 HGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSI 334
G+I ++D++ G A + H + S++ +S ++ +L K+ IHS+
Sbjct: 617 DGTIRIFDIKSGSPIAGWQAHSN----EILSVQFSSDENRLYSLGKDGKLYQWNIHSM 670
>sp|Q5ZKU8|PK1IP_CHICK p21-activated protein kinase-interacting protein 1-like OS=Gallus
gallus GN=PAK1IP1 PE=2 SV=1
Length = 369
Score = 35.4 bits (80), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Query: 180 VVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIW 239
V S Y + DE +++ R+ V G+ +Q + T+ L++ G++ IW
Sbjct: 43 VNSKYVVTGSRDESIQIYDMRKKVEH-GALLQHNGTITCLEFYGTAHLLSGAEDGLICIW 101
Query: 240 D-RRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHK 298
+ +R L S++ G + S+ +H ++ + G ++ W+L GR SA N K
Sbjct: 102 NTKRWECLKSIK---AHKGHVTSLSIHPSGKLALSVGTDKTLRTWNLVEGR-SAFIKNLK 157
Query: 299 EVCHL 303
+ H+
Sbjct: 158 QNAHI 162
>sp|P59235|NUP43_MOUSE Nucleoporin Nup43 OS=Mus musculus GN=Nup43 PE=2 SV=2
Length = 380
Score = 35.4 bits (80), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 218 AFSAVNTSRLIASDTHGVVNIWD-RRVGVLPSLELS-TGSHGTLNSIQLHAENQ-IIFAA 274
A + + T ++ ++ G + IWD R+ G P LS TG L+ + H + Q ++
Sbjct: 177 AVTFLRTPEIVTVNSIGQLKIWDFRQQGSEPCQILSLTGDRVPLHCVDRHPDQQHVVATG 236
Query: 275 GKHGSIYLWDLRGG 288
G+ G + +WD+R G
Sbjct: 237 GQDGMLSIWDVRQG 250
>sp|Q8NFH3|NUP43_HUMAN Nucleoporin Nup43 OS=Homo sapiens GN=NUP43 PE=1 SV=1
Length = 380
Score = 35.4 bits (80), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 218 AFSAVNTSRLIASDTHGVVNIWD-RRVGVLPSLELS-TGSHGTLNSIQLHAENQ-IIFAA 274
A + + T ++ ++ G + IWD R+ G PS LS TG L+ + H Q ++
Sbjct: 177 AVTFLRTPEILTVNSIGQLKIWDFRQQGNEPSQILSLTGDRVPLHCVDRHPNQQHVVATG 236
Query: 275 GKHGSIYLWDLRGG 288
G+ G + +WD+R G
Sbjct: 237 GQDGMLSIWDVRQG 250
>sp|A5DTX3|SEC31_LODEL Protein transport protein SEC31 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=SEC31 PE=3 SV=1
Length = 953
Score = 35.4 bits (80), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 20/197 (10%)
Query: 169 DEVACASTRSNV----VSIYDIGYISDEPVEVLKTRRSV---TVVGSDVQKGLSDLAFSA 221
DE++C + ++V S + GY S + LK+++ V + G+ + S +A+
Sbjct: 166 DEISCVAWNNSVSHILASTGNSGYTS---IWDLKSKKEVLHLSYTGATGKANFSHVAWHP 222
Query: 222 VNTSRLI-ASDTHG--VVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHG 278
+++L+ ASD+ V+ WD R P + G L+ + +++ ++GK
Sbjct: 223 TKSTKLVTASDSESCPVILTWDLRNSNAPEKVMEGHKKGVLSLDWCKQDPELLISSGKDN 282
Query: 279 SIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDP 338
+ LW+ G+ + + + S + T KI+ Q I D P
Sbjct: 283 ATILWNPIEGKK---LGEYPTTANWAFKTRFAPSAPDIFATASFDGKIIVQTIQ--DTSP 337
Query: 339 SCSYQLAFHLDDG--WS 353
S +++ DD WS
Sbjct: 338 PVSTKVSASHDDNEFWS 354
>sp|Q8C0M0|WDR59_MOUSE WD repeat-containing protein 59 OS=Mus musculus GN=Wdr59 PE=1 SV=2
Length = 992
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 190 SDEPVEVLKTRRSVTVVGSDVQ---KGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVL 246
S++ V++ K + VG+ +Q + +SDL ++ L+ S + IWD +
Sbjct: 81 SNQRVDLYKWKDGSGEVGTTLQGHTRVISDLDWAVFEPDLLVTSSVDTYIYIWDIKDTRK 140
Query: 247 PSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPF 294
P++ LS + + ++ + +N A G + +WD R T+ +
Sbjct: 141 PTVALSAVAGAS--QVKWNKKNANYLATSHDGDVRIWDKRKPSTAVEY 186
>sp|Q6PJI9|WDR59_HUMAN WD repeat-containing protein 59 OS=Homo sapiens GN=WDR59 PE=1 SV=2
Length = 974
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 190 SDEPVEVLKTRRSVTVVGSDVQ---KGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVL 246
S++ V++ K + VG+ +Q + +SDL ++ L+ S + IWD +
Sbjct: 81 SNQRVDLYKWKDGSGEVGTTLQGHTRVISDLDWAVFEPDLLVTSSVDTYIYIWDIKDTRK 140
Query: 247 PSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPF 294
P++ LS + + ++ + +N A G + +WD R T+ +
Sbjct: 141 PTVALSAVAGAS--QVKWNKKNANCLATSHDGDVRIWDKRKPSTAVEY 186
>sp|Q9W328|LST8_DROME Protein LST8 homolog OS=Drosophila melanogaster GN=CG3004 PE=2 SV=2
Length = 313
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 197 LKTRRSVTVVGSD-VQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGS 255
L++ + V+ D VQK ++ L F A + H V IWD + P
Sbjct: 65 LESNCTAPVINFDGVQKNVTRLGFQEDGNWMFTAGEDHHV-RIWDM-IAAPPHCSRIFDC 122
Query: 256 HGTLNSIQLHAENQIIFAAG-KHGSIYLWDLRGGR 289
+N+ LH NQ+ A G ++GS++LWD++ R
Sbjct: 123 EAPVNAACLHP-NQVEIAMGSQNGSVFLWDVKSER 156
>sp|Q5ZJW8|DTL_CHICK Denticleless protein homolog OS=Gallus gallus GN=DTL PE=2 SV=1
Length = 720
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 226 RLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIF-AAGKHGSIYLWD 284
R++ + +WD R G L L + G +L S+ + +F G+ G+I +WD
Sbjct: 108 RIVTASGDQTAKVWDVRAGEL--LGICKGHQCSLKSVAFSRFEKAVFCTGGRDGNIMVWD 165
Query: 285 LR 286
R
Sbjct: 166 TR 167
>sp|Q4WT34|PRP46_ASPFU Pre-mRNA-splicing factor prp46 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=prp46
PE=3 SV=1
Length = 453
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 227 LIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLR 286
L+ GV +WD R ++ + +G GT+ ++ + I ++ LWDL
Sbjct: 243 LVTGGRDGVARVWDMRT--RSNIHVLSGHKGTVADLKCQEADPQIITGSLDATVRLWDLA 300
Query: 287 GGRTSAPFHNHKE 299
G+T +HK+
Sbjct: 301 AGKTMGVLTHHKK 313
>sp|Q6P5U7|K1239_MOUSE Leucine-rich repeat and WD repeat-containing protein KIAA1239 OS=Mus
musculus GN=Kiaa1239 PE=2 SV=2
Length = 1742
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 227 LIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLR 286
L++ T GV++IWD + ++ ++ + + S+ L A +II++ ++ W+
Sbjct: 1289 LLSLSTSGVLSIWD--IDIITAMSNIDKTGKPIQSLVLPARGEIIYSLDGSDCVHKWNFS 1346
Query: 287 GGRTSAPFHNHKEVCHLPLTS 307
G A F + V H LTS
Sbjct: 1347 SGFIEAVFKHEGIVEHCVLTS 1367
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 224 TSRLIASDTHGV-VNIWD-RRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIY 281
+ RL+A+ VN+W + + SL TG + S++L+ ++I A + GSI
Sbjct: 32 SGRLLATGGDDCRVNLWSINKPNCIMSL---TGHTSPVESVRLNTPEELIVAGSQSGSIR 88
Query: 282 LWDLRGGRTSAPFHNHK-EVCHL 303
+WDL + HK +C L
Sbjct: 89 VWDLEAAKILRTLMGHKANICSL 111
>sp|Q6CJ50|MDV1_KLULA Mitochondrial division protein 1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=MDV1 PE=3 SV=1
Length = 705
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query: 234 GVVNIWDRRVG-VLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSA 292
G+V +WD R G V+ LE G + S+Q + N + A + SI +WDLR G S
Sbjct: 577 GIVRLWDLRSGKVVRMLE---GHTDAITSLQFDSVNLVTGAMDR--SIRIWDLRTGILSD 631
Query: 293 PFHNHKEVCHLPLTSL 308
F + P+TSL
Sbjct: 632 VFAYEQ-----PITSL 642
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180,553,618
Number of Sequences: 539616
Number of extensions: 7407960
Number of successful extensions: 19214
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 186
Number of HSP's that attempted gapping in prelim test: 19064
Number of HSP's gapped (non-prelim): 330
length of query: 489
length of database: 191,569,459
effective HSP length: 122
effective length of query: 367
effective length of database: 125,736,307
effective search space: 46145224669
effective search space used: 46145224669
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)