Query 037120
Match_columns 489
No_of_seqs 534 out of 3480
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 14:52:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037120.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037120hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 2E-40 6.8E-45 324.5 31.5 306 92-477 104-409 (410)
2 4g56_B MGC81050 protein; prote 100.0 3.5E-39 1.2E-43 309.6 32.5 298 93-480 39-344 (357)
3 4gqb_B Methylosome protein 50; 100.0 3.9E-39 1.3E-43 307.0 31.3 306 95-485 29-337 (344)
4 1got_B GT-beta; complex (GTP-b 100.0 1.3E-38 4.6E-43 303.7 33.8 291 91-476 50-340 (340)
5 2pbi_B Guanine nucleotide-bind 100.0 2.3E-38 7.8E-43 303.7 34.7 294 91-476 59-354 (354)
6 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.2E-38 4.1E-43 304.6 32.4 322 92-481 11-337 (345)
7 1nr0_A Actin interacting prote 100.0 3.1E-38 1E-42 325.0 37.4 331 92-479 55-567 (611)
8 3ow8_A WD repeat-containing pr 100.0 1.6E-38 5.6E-43 300.3 30.8 287 92-476 28-318 (321)
9 4ery_A WD repeat-containing pr 100.0 2E-37 6.9E-42 291.9 35.5 282 92-478 19-311 (312)
10 3iz6_a 40S ribosomal protein R 100.0 3.2E-38 1.1E-42 305.8 29.4 309 91-480 61-376 (380)
11 2ynn_A Coatomer subunit beta'; 100.0 9.7E-38 3.3E-42 292.9 31.8 281 92-476 9-300 (304)
12 1nr0_A Actin interacting prote 100.0 1.6E-36 5.4E-41 312.2 36.2 326 92-477 143-609 (611)
13 2ymu_A WD-40 repeat protein; u 100.0 3.5E-36 1.2E-40 307.9 34.6 305 92-476 258-577 (577)
14 2pm7_B Protein transport prote 100.0 1.6E-35 5.5E-40 276.8 34.3 260 92-478 5-284 (297)
15 2hes_X YDR267CP; beta-propelle 100.0 7.4E-36 2.5E-40 283.5 31.9 304 92-479 10-328 (330)
16 2ymu_A WD-40 repeat protein; u 100.0 4.9E-35 1.7E-39 299.4 35.1 309 92-480 217-540 (577)
17 1erj_A Transcriptional repress 100.0 2.4E-35 8.1E-40 287.0 31.1 314 94-480 62-390 (393)
18 2xzm_R RACK1; ribosome, transl 100.0 1.3E-34 4.5E-39 276.4 34.6 305 91-478 16-339 (343)
19 3frx_A Guanine nucleotide-bind 100.0 1.1E-34 3.8E-39 273.9 32.6 298 91-478 12-316 (319)
20 3bg1_A Protein SEC13 homolog; 100.0 3.5E-35 1.2E-39 277.1 23.0 260 92-478 9-292 (316)
21 4e54_B DNA damage-binding prot 100.0 4.2E-34 1.4E-38 282.1 31.3 298 93-479 116-430 (435)
22 2pm9_A Protein WEB1, protein t 100.0 1.6E-34 5.6E-39 283.0 27.7 341 97-479 13-414 (416)
23 3ei3_B DNA damage-binding prot 100.0 2.2E-33 7.5E-38 272.2 34.3 295 92-479 69-382 (383)
24 3gre_A Serine/threonine-protei 100.0 1.3E-33 4.5E-38 278.7 32.0 327 93-476 60-437 (437)
25 1r5m_A SIR4-interacting protei 100.0 8.5E-34 2.9E-38 278.3 29.1 327 95-478 44-424 (425)
26 1gxr_A ESG1, transducin-like e 100.0 1.3E-33 4.3E-38 268.3 29.2 311 97-477 10-335 (337)
27 4aow_A Guanine nucleotide-bind 100.0 5.2E-33 1.8E-37 264.6 31.6 302 91-479 33-337 (340)
28 3dm0_A Maltose-binding peripla 100.0 9.4E-33 3.2E-37 288.7 32.9 304 92-478 378-692 (694)
29 3zwl_B Eukaryotic translation 100.0 5.3E-32 1.8E-36 260.3 34.2 290 92-481 28-348 (369)
30 3vl1_A 26S proteasome regulato 100.0 3.4E-33 1.2E-37 274.1 26.1 306 98-479 58-365 (420)
31 3dw8_B Serine/threonine-protei 100.0 1.7E-32 5.9E-37 271.3 31.2 349 96-478 28-445 (447)
32 2ynn_A Coatomer subunit beta'; 100.0 8.8E-33 3E-37 259.1 26.4 248 148-479 9-259 (304)
33 3k26_A Polycomb protein EED; W 100.0 4.8E-32 1.6E-36 260.4 31.9 322 94-478 16-365 (366)
34 4a11_B DNA excision repair pro 100.0 3.9E-31 1.3E-35 258.0 38.7 324 92-481 39-367 (408)
35 4gqb_B Methylosome protein 50; 100.0 3E-32 1E-36 259.5 29.3 248 95-416 81-332 (344)
36 1k8k_C P40, ARP2/3 complex 41 100.0 5.8E-32 2E-36 260.7 31.1 314 93-479 5-361 (372)
37 3sfz_A APAF-1, apoptotic pepti 100.0 4.4E-32 1.5E-36 301.9 33.7 328 92-480 611-1035(1249)
38 1vyh_C Platelet-activating fac 100.0 3.8E-32 1.3E-36 265.8 28.2 265 148-479 104-369 (410)
39 3jrp_A Fusion protein of prote 100.0 1.3E-31 4.5E-36 258.6 31.7 260 92-478 7-286 (379)
40 4h5i_A Guanine nucleotide-exch 100.0 1.1E-31 3.9E-36 258.1 30.8 300 98-478 16-342 (365)
41 1sq9_A Antiviral protein SKI8; 100.0 9.4E-32 3.2E-36 261.8 30.5 323 92-479 12-395 (397)
42 3i2n_A WD repeat-containing pr 100.0 1.2E-31 3.9E-36 257.0 30.0 308 92-480 14-354 (357)
43 2xyi_A Probable histone-bindin 100.0 8.2E-32 2.8E-36 265.2 29.3 284 92-483 124-414 (430)
44 3frx_A Guanine nucleotide-bind 100.0 1.9E-31 6.4E-36 251.8 28.8 189 92-319 61-254 (319)
45 3dwl_C Actin-related protein 2 100.0 7.2E-33 2.5E-37 267.9 19.4 264 94-477 9-280 (377)
46 4gga_A P55CDC, cell division c 100.0 7.5E-31 2.6E-35 257.6 33.5 281 99-477 108-393 (420)
47 3ow8_A WD repeat-containing pr 100.0 2.4E-31 8.4E-36 251.1 28.8 248 149-479 29-279 (321)
48 4ggc_A P55CDC, cell division c 100.0 1.7E-30 5.9E-35 244.7 33.9 281 99-477 28-313 (318)
49 2oaj_A Protein SNI1; WD40 repe 100.0 9E-31 3.1E-35 279.4 35.8 190 94-319 15-228 (902)
50 2j04_B YDR362CP, TAU91; beta p 100.0 6.2E-32 2.1E-36 270.3 25.1 301 94-481 205-519 (524)
51 3f3f_A Nucleoporin SEH1; struc 100.0 7.2E-31 2.4E-35 250.0 31.4 200 92-314 7-226 (351)
52 3fm0_A Protein CIAO1; WDR39,SG 100.0 4E-31 1.4E-35 252.5 29.6 278 93-416 58-336 (345)
53 3odt_A Protein DOA1; ubiquitin 100.0 9.9E-31 3.4E-35 245.7 30.6 284 92-482 14-299 (313)
54 4g56_B MGC81050 protein; prote 100.0 9.2E-32 3.1E-36 258.0 23.9 282 102-479 11-301 (357)
55 2j04_B YDR362CP, TAU91; beta p 100.0 9.4E-32 3.2E-36 269.0 22.1 261 96-480 133-429 (524)
56 4gq1_A NUP37; propeller, trans 100.0 1.4E-31 4.8E-36 260.2 22.7 263 99-475 92-386 (393)
57 4aez_A CDC20, WD repeat-contai 100.0 1.5E-30 5E-35 254.0 29.6 283 99-480 96-381 (401)
58 2hes_X YDR267CP; beta-propelle 100.0 7.8E-31 2.7E-35 248.8 26.5 173 95-288 57-231 (330)
59 1pgu_A Actin interacting prote 100.0 6.2E-30 2.1E-34 263.4 35.4 317 92-479 156-614 (615)
60 1got_B GT-beta; complex (GTP-b 100.0 1.4E-30 4.7E-35 248.2 27.9 193 93-318 94-286 (340)
61 3vl1_A 26S proteasome regulato 100.0 3.7E-30 1.3E-34 252.5 31.3 292 97-479 98-419 (420)
62 3sfz_A APAF-1, apoptotic pepti 100.0 3.6E-30 1.2E-34 286.5 34.0 316 92-480 653-1075(1249)
63 2oaj_A Protein SNI1; WD40 repe 100.0 9.7E-31 3.3E-35 279.2 28.2 168 95-292 57-247 (902)
64 2aq5_A Coronin-1A; WD40 repeat 100.0 3.6E-30 1.2E-34 251.3 29.3 300 99-479 37-342 (402)
65 3jro_A Fusion protein of prote 100.0 2E-30 7E-35 272.7 28.1 260 92-478 5-284 (753)
66 3iz6_a 40S ribosomal protein R 100.0 1.3E-30 4.5E-35 252.3 24.2 273 92-416 104-376 (380)
67 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.7E-29 9.3E-34 248.5 34.1 309 92-480 114-443 (445)
68 1pgu_A Actin interacting prote 100.0 3.9E-29 1.3E-33 257.4 35.4 328 92-480 112-573 (615)
69 3mkq_A Coatomer beta'-subunit; 100.0 5.6E-30 1.9E-34 272.7 29.1 286 92-477 9-300 (814)
70 2pbi_B Guanine nucleotide-bind 100.0 1.6E-29 5.4E-34 242.2 28.7 194 94-317 104-299 (354)
71 1gxr_A ESG1, transducin-like e 100.0 5.1E-29 1.7E-33 236.4 30.9 273 94-414 49-336 (337)
72 3dwl_C Actin-related protein 2 100.0 5E-30 1.7E-34 247.9 24.2 197 92-319 51-268 (377)
73 2xzm_R RACK1; ribosome, transl 100.0 4.7E-29 1.6E-33 238.0 30.4 254 148-479 17-285 (343)
74 3v7d_B Cell division control p 100.0 1.9E-28 6.5E-33 243.7 35.1 303 92-476 117-460 (464)
75 3mkq_A Coatomer beta'-subunit; 100.0 5E-29 1.7E-33 265.4 32.6 224 92-351 51-294 (814)
76 3mmy_A MRNA export factor; mRN 100.0 2.3E-29 7.7E-34 241.8 27.1 285 92-475 35-342 (368)
77 1erj_A Transcriptional repress 100.0 9.8E-29 3.3E-33 240.3 31.7 157 98-289 125-289 (393)
78 2pm9_A Protein WEB1, protein t 100.0 4.5E-30 1.5E-34 251.4 22.1 275 158-481 15-339 (416)
79 1yfq_A Cell cycle arrest prote 100.0 1.5E-29 5.2E-34 240.9 24.9 286 93-471 8-315 (342)
80 1p22_A F-BOX/WD-repeat protein 100.0 7.6E-29 2.6E-33 244.5 29.7 277 94-481 131-416 (435)
81 2pm7_B Protein transport prote 100.0 1.4E-28 4.7E-33 229.7 28.0 220 149-479 6-238 (297)
82 4e54_B DNA damage-binding prot 100.0 2.5E-29 8.6E-34 247.9 23.4 267 92-416 160-431 (435)
83 1r5m_A SIR4-interacting protei 100.0 3E-28 1E-32 238.7 29.7 280 158-481 48-363 (425)
84 4ery_A WD repeat-containing pr 100.0 2.8E-28 9.5E-33 229.3 26.9 250 147-481 18-270 (312)
85 3dm0_A Maltose-binding peripla 100.0 2.8E-28 9.5E-33 254.8 26.8 193 92-319 426-619 (694)
86 1k8k_C P40, ARP2/3 complex 41 100.0 8.3E-28 2.9E-32 231.5 26.9 198 92-319 48-261 (372)
87 2j04_A TAU60, YPL007P, hypothe 100.0 4E-28 1.4E-32 237.2 24.3 264 96-478 15-296 (588)
88 3lrv_A PRE-mRNA-splicing facto 100.0 4.6E-28 1.6E-32 231.1 23.2 237 103-478 43-291 (343)
89 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.7E-27 2.3E-31 231.6 31.9 324 97-479 5-391 (450)
90 3bg1_A Protein SEC13 homolog; 100.0 4E-28 1.4E-32 228.7 21.9 227 149-479 10-247 (316)
91 4h5i_A Guanine nucleotide-exch 100.0 1.1E-27 3.7E-32 230.2 24.6 182 96-313 133-323 (365)
92 4aez_A CDC20, WD repeat-contai 100.0 1.2E-26 4.2E-31 226.1 31.8 184 95-318 133-319 (401)
93 3vu4_A KMHSV2; beta-propeller 100.0 4.6E-27 1.6E-31 225.1 27.7 266 92-479 15-336 (355)
94 3ei3_B DNA damage-binding prot 100.0 3.8E-27 1.3E-31 228.2 26.8 260 94-415 116-382 (383)
95 4gga_A P55CDC, cell division c 100.0 1.2E-26 4E-31 227.7 28.0 247 94-416 145-396 (420)
96 4aow_A Guanine nucleotide-bind 100.0 2.5E-26 8.7E-31 218.3 28.3 251 148-480 34-287 (340)
97 2j04_A TAU60, YPL007P, hypothe 100.0 1.7E-27 5.8E-32 232.9 19.7 193 96-318 85-283 (588)
98 3zwl_B Eukaryotic translation 100.0 7.9E-26 2.7E-30 217.1 29.7 200 92-319 70-276 (369)
99 3k26_A Polycomb protein EED; W 100.0 1.4E-26 4.9E-31 222.1 24.1 271 150-480 16-319 (366)
100 3gre_A Serine/threonine-protei 100.0 2.4E-27 8.4E-32 233.8 19.0 288 94-412 109-437 (437)
101 4a11_B DNA excision repair pro 99.9 1.3E-25 4.3E-30 218.9 28.1 291 94-479 97-405 (408)
102 1sq9_A Antiviral protein SKI8; 99.9 7.3E-26 2.5E-30 220.1 25.5 269 149-480 13-323 (397)
103 3i2n_A WD repeat-containing pr 99.9 1.3E-25 4.3E-30 214.9 26.2 263 94-416 63-354 (357)
104 3bws_A Protein LP49; two-domai 99.9 2.2E-25 7.5E-30 219.4 28.2 286 97-478 123-431 (433)
105 2w18_A PALB2, fancn, partner a 99.9 1.3E-25 4.5E-30 206.4 24.3 302 99-476 42-354 (356)
106 2aq5_A Coronin-1A; WD40 repeat 99.9 3E-25 1E-29 216.4 28.1 196 92-317 77-282 (402)
107 3jrp_A Fusion protein of prote 99.9 2.6E-25 8.8E-30 214.5 26.4 225 149-480 8-241 (379)
108 3odt_A Protein DOA1; ubiquitin 99.9 1E-24 3.5E-29 204.5 28.4 242 147-480 13-256 (313)
109 3lrv_A PRE-mRNA-splicing facto 99.9 1.6E-25 5.5E-30 213.4 23.1 174 97-296 77-253 (343)
110 1p22_A F-BOX/WD-repeat protein 99.9 9.2E-25 3.2E-29 215.2 27.0 176 92-310 169-344 (435)
111 3dw8_B Serine/threonine-protei 99.9 1.1E-25 3.8E-30 222.4 20.4 265 158-480 31-374 (447)
112 1l0q_A Surface layer protein; 99.9 3.8E-24 1.3E-28 207.6 30.5 269 109-479 3-275 (391)
113 2xyi_A Probable histone-bindin 99.9 7.5E-25 2.6E-29 215.5 25.8 176 92-288 177-354 (430)
114 3v7d_B Cell division control p 99.9 7E-24 2.4E-28 210.7 31.9 276 92-412 158-460 (464)
115 1yfq_A Cell cycle arrest prote 99.9 1.4E-24 4.8E-29 206.5 24.9 261 150-480 9-283 (342)
116 3mmy_A MRNA export factor; mRN 99.9 3.5E-24 1.2E-28 205.5 27.5 262 149-479 36-304 (368)
117 3f3f_A Nucleoporin SEH1; struc 99.9 3E-24 1E-28 204.1 26.1 226 149-480 8-250 (351)
118 4gq1_A NUP37; propeller, trans 99.9 1.6E-25 5.6E-30 217.4 17.7 118 168-296 101-227 (393)
119 4ggc_A P55CDC, cell division c 99.9 8.9E-24 3E-28 198.6 27.5 248 93-416 64-316 (318)
120 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.8E-23 6.1E-28 207.0 30.5 277 92-416 98-392 (450)
121 2ovr_B FBW7, F-BOX/WD repeat p 99.9 2E-23 7E-28 206.3 30.8 264 147-480 113-392 (445)
122 1l0q_A Surface layer protein; 99.9 7.5E-23 2.6E-27 198.4 31.0 242 96-416 31-276 (391)
123 2w18_A PALB2, fancn, partner a 99.9 7.7E-24 2.6E-28 194.7 22.0 171 98-300 113-327 (356)
124 3jro_A Fusion protein of prote 99.9 7.1E-24 2.4E-28 223.0 24.8 225 149-480 6-239 (753)
125 3bws_A Protein LP49; two-domai 99.9 3E-22 1E-26 197.0 25.6 250 158-479 125-390 (433)
126 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.9E-22 9.9E-27 195.8 23.4 290 98-461 64-410 (415)
127 2ecf_A Dipeptidyl peptidase IV 99.9 4E-21 1.4E-25 202.3 30.7 318 97-478 37-458 (741)
128 3vu4_A KMHSV2; beta-propeller 99.9 1.3E-21 4.5E-26 187.1 24.0 229 149-480 16-272 (355)
129 1nir_A Nitrite reductase; hemo 99.9 3.5E-20 1.2E-24 186.7 31.1 289 103-482 144-461 (543)
130 3vgz_A Uncharacterized protein 99.9 1.5E-19 5.1E-24 172.4 31.1 283 97-469 41-334 (353)
131 1xfd_A DIP, dipeptidyl aminope 99.9 1.8E-20 6.2E-25 196.7 26.1 307 99-466 19-427 (723)
132 2oit_A Nucleoporin 214KDA; NH2 99.9 4E-20 1.4E-24 181.3 25.4 187 97-296 37-231 (434)
133 1nir_A Nitrite reductase; hemo 99.9 1.1E-18 3.7E-23 175.9 34.4 310 99-479 181-514 (543)
134 1ri6_A Putative isomerase YBHE 99.9 2.5E-19 8.4E-24 170.0 26.7 288 109-478 6-307 (343)
135 2ojh_A Uncharacterized protein 99.8 1.3E-19 4.4E-24 167.9 20.6 174 95-298 40-216 (297)
136 3u4y_A Uncharacterized protein 99.8 7.5E-19 2.5E-23 166.1 25.7 292 103-482 4-307 (331)
137 1k32_A Tricorn protease; prote 99.8 4E-19 1.4E-23 193.7 26.3 325 92-479 48-461 (1045)
138 2z3z_A Dipeptidyl aminopeptida 99.8 3.2E-18 1.1E-22 179.1 28.3 293 97-479 82-435 (706)
139 3hfq_A Uncharacterized protein 99.8 6.8E-18 2.3E-22 160.7 27.2 168 97-287 40-218 (347)
140 3u4y_A Uncharacterized protein 99.8 1.8E-17 6.2E-22 156.5 29.4 254 97-416 41-305 (331)
141 1pby_B Quinohemoprotein amine 99.8 1.5E-18 5E-23 164.2 21.4 296 109-480 2-311 (337)
142 2hqs_A Protein TOLB; TOLB, PAL 99.8 4.3E-18 1.5E-22 166.1 25.1 186 93-319 175-370 (415)
143 1ri6_A Putative isomerase YBHE 99.8 1.9E-17 6.6E-22 156.9 28.5 165 95-287 36-209 (343)
144 1k32_A Tricorn protease; prote 99.8 3.4E-18 1.1E-22 186.4 25.0 180 98-319 297-488 (1045)
145 1jmx_B Amine dehydrogenase; ox 99.8 1.2E-17 4.2E-22 158.7 24.3 292 101-479 4-325 (349)
146 3o4h_A Acylamino-acid-releasin 99.8 3.5E-18 1.2E-22 174.7 20.9 232 98-477 23-274 (582)
147 2z3z_A Dipeptidyl aminopeptida 99.8 1.6E-17 5.6E-22 173.7 25.2 288 99-477 28-389 (706)
148 2ecf_A Dipeptidyl peptidase IV 99.8 5.9E-17 2E-21 170.4 28.4 272 158-478 39-412 (741)
149 2oit_A Nucleoporin 214KDA; NH2 99.8 3.8E-18 1.3E-22 167.2 16.8 170 96-288 92-279 (434)
150 2ojh_A Uncharacterized protein 99.8 9.3E-17 3.2E-21 148.5 23.9 135 114-286 18-159 (297)
151 1z68_A Fibroblast activation p 99.8 6.5E-17 2.2E-21 169.6 23.8 143 101-277 20-189 (719)
152 1xfd_A DIP, dipeptidyl aminope 99.8 3.4E-17 1.2E-21 171.8 21.4 274 158-478 19-392 (723)
153 1z68_A Fibroblast activation p 99.7 2.7E-16 9.2E-21 164.8 23.7 191 98-317 61-326 (719)
154 3scy_A Hypothetical bacterial 99.7 3.7E-15 1.3E-19 142.6 29.6 173 96-290 49-245 (361)
155 3pe7_A Oligogalacturonate lyas 99.7 4.7E-15 1.6E-19 143.2 27.2 286 102-477 41-380 (388)
156 3scy_A Hypothetical bacterial 99.7 8E-15 2.7E-19 140.2 28.1 290 106-478 11-336 (361)
157 3vgz_A Uncharacterized protein 99.7 3.3E-15 1.1E-19 142.2 24.6 243 158-479 43-303 (353)
158 4a5s_A Dipeptidyl peptidase 4 99.7 7.2E-15 2.5E-19 154.3 29.4 181 99-317 19-274 (740)
159 1jof_A Carboxy-CIS,CIS-muconat 99.7 3E-15 1E-19 143.5 23.1 164 97-286 40-223 (365)
160 3fvz_A Peptidyl-glycine alpha- 99.7 1.7E-14 5.7E-19 136.1 26.4 263 97-480 24-323 (329)
161 3o4h_A Acylamino-acid-releasin 99.6 8.9E-15 3.1E-19 149.4 20.3 161 97-297 65-236 (582)
162 3hfq_A Uncharacterized protein 99.6 5.1E-14 1.8E-18 133.8 21.6 200 96-317 85-300 (347)
163 1q7f_A NHL, brain tumor CG1071 99.6 1.2E-12 4E-17 120.7 29.6 160 97-286 30-193 (286)
164 1pby_B Quinohemoprotein amine 99.6 1.3E-13 4.3E-18 130.1 21.9 130 170-318 3-150 (337)
165 3azo_A Aminopeptidase; POP fam 99.6 5.5E-13 1.9E-17 138.2 26.8 200 93-317 20-256 (662)
166 4a5s_A Dipeptidyl peptidase 4 99.6 1.2E-13 4E-18 145.1 21.3 146 158-319 19-187 (740)
167 1rwi_B Serine/threonine-protei 99.5 1.4E-11 4.6E-16 112.4 26.9 156 98-288 25-181 (270)
168 3c5m_A Oligogalacturonate lyas 99.5 4.2E-13 1.4E-17 129.7 17.3 182 99-318 38-253 (396)
169 1jmx_B Amine dehydrogenase; ox 99.5 1.4E-12 4.6E-17 123.7 20.4 122 98-245 44-177 (349)
170 2xdw_A Prolyl endopeptidase; a 99.5 1.1E-11 3.6E-16 129.6 27.6 161 98-289 126-322 (710)
171 3e5z_A Putative gluconolactona 99.5 8.4E-12 2.9E-16 115.6 23.1 156 97-286 28-201 (296)
172 3azo_A Aminopeptidase; POP fam 99.4 7.1E-12 2.4E-16 129.9 21.8 164 101-290 81-277 (662)
173 2bkl_A Prolyl endopeptidase; m 99.4 1E-11 3.6E-16 129.3 22.5 159 98-289 122-306 (695)
174 2dg1_A DRP35, lactonase; beta 99.4 1.7E-11 5.8E-16 115.5 21.8 180 98-317 7-196 (333)
175 2oiz_A Aromatic amine dehydrog 99.4 1.7E-11 5.8E-16 116.9 21.8 161 101-288 54-231 (361)
176 2gop_A Trilobed protease; beta 99.4 2.4E-11 8.3E-16 115.1 21.8 136 98-277 16-190 (347)
177 3pe7_A Oligogalacturonate lyas 99.4 4.6E-11 1.6E-15 115.0 23.3 156 99-290 83-276 (388)
178 2z2n_A Virginiamycin B lyase; 99.4 6.4E-09 2.2E-13 95.8 34.4 185 95-318 13-198 (299)
179 1qks_A Cytochrome CD1 nitrite 99.4 1.6E-09 5.5E-14 108.9 32.1 290 104-480 163-478 (567)
180 1jof_A Carboxy-CIS,CIS-muconat 99.3 3.6E-11 1.2E-15 115.0 18.5 178 96-288 144-342 (365)
181 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 4.8E-10 1.6E-14 104.5 25.7 160 97-286 18-206 (314)
182 1xip_A Nucleoporin NUP159; bet 99.3 2.3E-11 8E-16 115.3 15.8 183 98-321 39-232 (388)
183 1qks_A Cytochrome CD1 nitrite 99.3 3.8E-09 1.3E-13 106.1 32.7 174 98-296 198-382 (567)
184 1yr2_A Prolyl oligopeptidase; 99.3 4.5E-10 1.6E-14 117.8 24.9 161 98-288 164-351 (741)
185 3fvz_A Peptidyl-glycine alpha- 99.3 3.8E-10 1.3E-14 106.2 20.8 198 97-315 91-304 (329)
186 3c5m_A Oligogalacturonate lyas 99.3 1.9E-10 6.5E-15 110.9 18.1 193 100-318 84-298 (396)
187 3dsm_A Uncharacterized protein 99.3 3.1E-09 1.1E-13 99.8 25.9 278 116-482 15-305 (328)
188 2oiz_A Aromatic amine dehydrog 99.2 8.8E-10 3E-14 105.0 22.0 90 217-315 259-360 (361)
189 2gop_A Trilobed protease; beta 99.2 7.6E-10 2.6E-14 104.7 21.2 129 158-318 17-185 (347)
190 1q7f_A NHL, brain tumor CG1071 99.2 2.1E-09 7.2E-14 98.7 22.9 183 97-316 77-264 (286)
191 2dg1_A DRP35, lactonase; beta 99.2 3E-09 1E-13 100.0 23.5 187 95-318 43-248 (333)
192 2xdw_A Prolyl endopeptidase; a 99.2 8.7E-10 3E-14 115.1 21.6 202 208-475 121-362 (710)
193 3no2_A Uncharacterized protein 99.2 4E-09 1.4E-13 96.2 23.1 153 107-296 4-163 (276)
194 2bkl_A Prolyl endopeptidase; m 99.2 1.4E-09 4.7E-14 113.3 21.4 104 208-318 117-242 (695)
195 2qc5_A Streptogramin B lactona 99.2 1.8E-07 6.3E-12 86.0 32.7 183 96-318 19-203 (300)
196 3dsm_A Uncharacterized protein 99.1 1.1E-08 3.8E-13 96.0 23.4 183 99-318 46-240 (328)
197 3e5z_A Putative gluconolactona 99.1 4.7E-09 1.6E-13 96.9 20.5 138 158-317 30-186 (296)
198 3hrp_A Uncharacterized protein 99.1 4.5E-08 1.5E-12 94.6 27.3 162 97-287 131-298 (409)
199 1xip_A Nucleoporin NUP159; bet 99.1 7.4E-09 2.5E-13 98.1 21.1 115 158-290 40-158 (388)
200 1rwi_B Serine/threonine-protei 99.1 1.4E-08 4.7E-13 92.2 20.8 158 97-289 67-224 (270)
201 3g4e_A Regucalcin; six bladed 99.1 3.9E-08 1.3E-12 90.8 24.0 154 99-286 15-179 (297)
202 3iuj_A Prolyl endopeptidase; h 99.1 1.5E-08 5.1E-13 105.3 22.6 164 98-290 130-317 (693)
203 2mad_H Methylamine dehydrogena 99.0 1.8E-07 6.2E-12 89.1 27.6 261 101-480 70-351 (373)
204 3no2_A Uncharacterized protein 99.0 2.4E-08 8.1E-13 91.1 20.5 186 226-478 7-194 (276)
205 2ghs_A AGR_C_1268P; regucalcin 99.0 1.3E-07 4.4E-12 88.6 24.1 151 99-286 51-209 (326)
206 2qe8_A Uncharacterized protein 98.9 1.2E-07 4.2E-12 89.5 22.1 278 158-477 19-319 (343)
207 2z2n_A Virginiamycin B lyase; 98.9 3.8E-06 1.3E-10 77.0 30.5 237 158-478 17-254 (299)
208 3g4e_A Regucalcin; six bladed 98.9 2.1E-07 7.2E-12 85.9 21.4 189 97-317 54-256 (297)
209 1yr2_A Prolyl oligopeptidase; 98.9 5.3E-08 1.8E-12 102.1 18.0 141 164-318 115-283 (741)
210 3dr2_A Exported gluconolactona 98.9 4.3E-07 1.5E-11 84.1 22.0 155 99-288 47-225 (305)
211 3sjl_D Methylamine dehydrogena 98.9 1.3E-06 4.5E-11 82.4 25.1 154 102-290 38-212 (386)
212 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 2.7E-07 9.1E-12 85.6 18.7 161 98-287 118-299 (314)
213 3sjl_D Methylamine dehydrogena 98.7 1.8E-06 6.2E-11 81.5 21.7 162 101-289 82-258 (386)
214 2qc5_A Streptogramin B lactona 98.7 1.8E-05 6.1E-10 72.5 28.4 236 158-478 22-259 (300)
215 2ghs_A AGR_C_1268P; regucalcin 98.7 2.9E-06 1E-10 79.3 22.4 186 97-316 90-285 (326)
216 3c75_H MADH, methylamine dehyd 98.7 4.3E-06 1.5E-10 80.3 23.2 258 179-481 99-404 (426)
217 3hrp_A Uncharacterized protein 98.6 5.2E-06 1.8E-10 80.1 21.2 113 158-289 133-251 (409)
218 2qe8_A Uncharacterized protein 98.6 2.6E-06 9E-11 80.2 18.5 204 96-317 66-305 (343)
219 3c75_H MADH, methylamine dehyd 98.6 6.8E-06 2.3E-10 79.0 20.6 163 101-289 122-297 (426)
220 2mad_H Methylamine dehydrogena 98.6 2.2E-05 7.5E-10 74.6 24.2 182 99-315 127-330 (373)
221 2hz6_A Endoplasmic reticulum t 98.5 8E-08 2.7E-12 91.6 4.4 145 107-292 8-154 (369)
222 3iuj_A Prolyl endopeptidase; h 98.4 1E-05 3.6E-10 83.9 20.2 185 100-317 178-385 (693)
223 1mda_H Methylamine dehydrogena 98.4 4.7E-06 1.6E-10 78.7 15.3 256 101-433 69-354 (368)
224 3nol_A Glutamine cyclotransfer 98.4 1.9E-05 6.4E-10 69.7 17.4 158 99-296 45-210 (262)
225 2ece_A 462AA long hypothetical 98.4 0.00022 7.5E-09 68.0 25.6 270 162-467 88-399 (462)
226 2iwa_A Glutamine cyclotransfer 98.4 2.9E-05 1E-09 69.2 18.4 159 99-295 23-189 (266)
227 3dr2_A Exported gluconolactona 98.3 1.2E-05 4.1E-10 74.3 15.9 184 96-317 85-291 (305)
228 1mda_H Methylamine dehydrogena 98.3 3.1E-05 1.1E-09 73.0 18.8 258 170-481 34-348 (368)
229 1npe_A Nidogen, entactin; glyc 98.3 0.00062 2.1E-08 61.2 26.3 158 98-287 37-198 (267)
230 1fwx_A Nitrous oxide reductase 98.3 2.2E-05 7.6E-10 77.4 16.8 218 166-415 100-361 (595)
231 2ece_A 462AA long hypothetical 98.3 4.7E-05 1.6E-09 72.5 18.3 162 100-287 141-352 (462)
232 3nok_A Glutaminyl cyclase; bet 98.3 7.5E-05 2.6E-09 65.9 18.1 156 99-295 57-218 (268)
233 3hxj_A Pyrrolo-quinoline quino 98.2 0.00013 4.5E-09 67.7 20.8 168 99-317 62-229 (330)
234 3mbr_X Glutamine cyclotransfer 98.2 0.00023 7.7E-09 62.2 19.4 157 99-295 23-187 (243)
235 2iwa_A Glutamine cyclotransfer 98.0 0.00065 2.2E-08 60.5 19.8 211 213-480 22-238 (266)
236 1kb0_A Quinohemoprotein alcoho 98.0 0.0016 5.4E-08 67.0 25.4 79 215-295 246-354 (677)
237 1npe_A Nidogen, entactin; glyc 98.0 0.0079 2.7E-07 53.8 27.1 96 213-315 37-134 (267)
238 2fp8_A Strictosidine synthase; 98.0 0.0019 6.5E-08 59.8 23.0 197 98-318 20-244 (322)
239 2hz6_A Endoplasmic reticulum t 98.0 1.2E-06 4.1E-11 83.4 0.6 158 99-295 40-200 (369)
240 1yiq_A Quinohemoprotein alcoho 98.0 0.0031 1.1E-07 65.0 26.1 78 215-294 238-345 (689)
241 1fwx_A Nitrous oxide reductase 98.0 0.00012 4.2E-09 72.2 14.5 73 213-287 278-361 (595)
242 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.0097 3.3E-07 56.2 27.2 156 108-295 53-215 (376)
243 2xe4_A Oligopeptidase B; hydro 97.9 0.001 3.5E-08 69.5 21.4 160 98-287 175-354 (751)
244 1kb0_A Quinohemoprotein alcoho 97.9 0.00037 1.3E-08 71.7 17.6 78 234-317 457-534 (677)
245 1yiq_A Quinohemoprotein alcoho 97.9 0.00026 8.7E-09 73.1 16.3 79 233-317 454-532 (689)
246 3hxj_A Pyrrolo-quinoline quino 97.9 0.0007 2.4E-08 62.7 17.7 168 101-317 24-191 (330)
247 3nol_A Glutamine cyclotransfer 97.8 0.0035 1.2E-07 55.2 19.9 79 213-296 44-125 (262)
248 3nok_A Glutaminyl cyclase; bet 97.8 0.0021 7.1E-08 56.7 17.7 78 213-296 56-134 (268)
249 1k3i_A Galactose oxidase precu 97.7 0.0013 4.4E-08 67.6 18.6 117 101-245 190-325 (656)
250 2p4o_A Hypothetical protein; p 97.7 0.029 9.9E-07 51.3 27.5 157 97-287 32-198 (306)
251 3v65_B Low-density lipoprotein 97.7 0.039 1.3E-06 52.4 28.1 182 97-317 77-260 (386)
252 3qqz_A Putative uncharacterize 97.6 0.036 1.2E-06 48.9 26.0 174 92-290 22-206 (255)
253 3mbr_X Glutamine cyclotransfer 97.5 0.036 1.2E-06 48.3 22.4 118 158-295 23-141 (243)
254 3v64_C Agrin; beta propeller, 97.5 0.058 2E-06 50.3 29.6 156 97-287 34-191 (349)
255 3v64_C Agrin; beta propeller, 97.5 0.053 1.8E-06 50.6 23.9 159 97-287 73-234 (349)
256 2xe4_A Oligopeptidase B; hydro 97.4 0.011 3.7E-07 61.7 19.8 72 213-289 175-258 (751)
257 4a2l_A BT_4663, two-component 97.3 0.21 7.1E-06 52.4 38.0 195 97-317 263-466 (795)
258 3v65_B Low-density lipoprotein 97.3 0.039 1.3E-06 52.4 21.8 159 97-287 116-277 (386)
259 1kv9_A Type II quinohemoprotei 97.3 0.03 1E-06 57.4 22.4 79 215-295 233-341 (668)
260 3tc9_A Hypothetical hydrolase; 97.3 0.013 4.6E-07 56.5 18.5 158 98-287 138-301 (430)
261 3qqz_A Putative uncharacterize 97.3 0.078 2.7E-06 46.8 22.2 225 207-477 22-251 (255)
262 3m0c_C LDL receptor, low-densi 97.3 0.22 7.7E-06 51.7 28.8 145 158-317 426-572 (791)
263 4a2l_A BT_4663, two-component 97.2 0.28 9.6E-06 51.4 35.3 184 97-317 88-277 (795)
264 3tc9_A Hypothetical hydrolase; 97.2 0.15 5E-06 49.1 24.4 137 158-316 139-283 (430)
265 3p5b_L Low density lipoprotein 97.2 0.18 6.3E-06 47.9 29.3 143 158-317 114-260 (400)
266 2p4o_A Hypothetical protein; p 97.1 0.037 1.3E-06 50.6 18.6 168 98-290 73-244 (306)
267 1ijq_A LDL receptor, low-densi 97.1 0.16 5.6E-06 46.5 28.3 143 158-317 32-178 (316)
268 2p9w_A MAL S 1 allergenic prot 97.1 0.14 4.7E-06 46.7 21.2 167 214-416 15-216 (334)
269 2fp8_A Strictosidine synthase; 97.0 0.036 1.2E-06 51.0 17.8 155 98-287 127-313 (322)
270 1ijq_A LDL receptor, low-densi 97.0 0.19 6.4E-06 46.1 23.8 163 97-287 30-195 (316)
271 3kya_A Putative phosphatase; s 97.0 0.28 9.4E-06 47.8 25.4 117 158-286 141-277 (496)
272 3q7m_A Lipoprotein YFGL, BAMB; 97.0 0.22 7.7E-06 46.6 23.8 70 222-296 102-171 (376)
273 4hw6_A Hypothetical protein, I 97.0 0.3 1E-05 47.0 27.8 155 98-286 140-303 (433)
274 3pbp_A Nucleoporin NUP82; beta 96.9 0.082 2.8E-06 49.8 18.3 122 158-283 68-208 (452)
275 4hw6_A Hypothetical protein, I 96.9 0.34 1.2E-05 46.6 23.8 140 158-316 141-286 (433)
276 3sov_A LRP-6, low-density lipo 96.9 0.27 9.3E-06 45.0 23.2 159 98-287 36-197 (318)
277 2p9w_A MAL S 1 allergenic prot 96.8 0.085 2.9E-06 48.1 17.7 172 100-287 16-215 (334)
278 3p5b_L Low density lipoprotein 96.8 0.3 1E-05 46.4 22.5 168 98-296 160-329 (400)
279 3m0c_C LDL receptor, low-densi 96.7 0.25 8.4E-06 51.4 22.5 167 96-290 423-592 (791)
280 1kv9_A Type II quinohemoprotei 96.6 0.057 1.9E-06 55.4 16.7 62 233-297 437-498 (668)
281 1n7d_A LDL receptor, low-densi 96.6 0.02 7E-07 58.9 13.3 117 158-287 408-528 (699)
282 2ad6_A Methanol dehydrogenase 96.6 0.53 1.8E-05 47.1 23.3 77 217-295 240-343 (571)
283 3sre_A PON1, serum paraoxonase 96.5 0.38 1.3E-05 44.7 20.1 167 98-287 51-252 (355)
284 2xbg_A YCF48-like protein; pho 96.3 0.58 2E-05 43.0 20.4 155 97-285 163-320 (327)
285 3kya_A Putative phosphatase; s 96.3 0.17 6E-06 49.2 17.0 164 98-286 140-340 (496)
286 1flg_A Protein (quinoprotein e 96.3 0.33 1.1E-05 48.7 19.6 62 233-297 465-526 (582)
287 2ad6_A Methanol dehydrogenase 96.3 0.17 5.8E-06 50.7 17.4 61 233-296 443-503 (571)
288 2ism_A Putative oxidoreductase 96.2 0.75 2.6E-05 42.8 21.4 107 158-276 33-154 (352)
289 3sov_A LRP-6, low-density lipo 96.2 0.69 2.4E-05 42.3 27.9 116 158-287 37-154 (318)
290 1w6s_A Methanol dehydrogenase 96.2 0.47 1.6E-05 47.7 20.0 76 217-295 246-350 (599)
291 3pbp_A Nucleoporin NUP82; beta 96.1 0.16 5.3E-06 48.0 14.8 136 98-240 67-209 (452)
292 3v9f_A Two-component system se 96.0 1.8 6E-05 45.2 32.1 194 97-317 313-509 (781)
293 1n7d_A LDL receptor, low-densi 95.8 0.026 8.9E-07 58.1 9.2 166 99-295 455-622 (699)
294 2g8s_A Glucose/sorbosone dehyd 95.8 1.2 4.2E-05 41.3 23.4 111 158-276 20-149 (353)
295 3v9f_A Two-component system se 95.5 2.8 9.6E-05 43.6 34.3 199 97-317 211-421 (781)
296 1w6s_A Methanol dehydrogenase 95.5 0.77 2.6E-05 46.1 18.4 62 232-296 451-512 (599)
297 3s94_A LRP-6, low-density lipo 95.3 2.8 9.6E-05 42.3 32.3 166 97-295 84-251 (619)
298 2xzh_A Clathrin heavy chain 1; 95.3 1.7 5.7E-05 39.5 25.2 123 103-259 73-202 (365)
299 3a9g_A Putative uncharacterize 95.1 2.1 7.3E-05 39.7 24.6 107 158-276 31-154 (354)
300 1cru_A Protein (soluble quinop 95.0 2.4 8.3E-05 40.9 19.6 120 98-231 28-162 (454)
301 1flg_A Protein (quinoprotein e 94.9 3.5 0.00012 41.2 29.0 62 234-296 291-364 (582)
302 2xbg_A YCF48-like protein; pho 94.9 2.3 7.7E-05 38.9 19.6 76 210-289 161-236 (327)
303 3das_A Putative oxidoreductase 94.6 2.1 7.2E-05 39.5 17.1 116 97-231 32-158 (347)
304 1k3i_A Galactose oxidase precu 94.1 0.38 1.3E-05 49.1 12.2 118 160-289 190-325 (656)
305 2g8s_A Glucose/sorbosone dehyd 94.0 3 0.0001 38.7 17.2 157 98-274 19-214 (353)
306 2ism_A Putative oxidoreductase 94.0 1.9 6.6E-05 39.9 15.8 110 98-231 32-153 (352)
307 1tl2_A L10, protein (tachylect 93.8 2.8 9.6E-05 35.7 15.9 158 98-281 42-204 (236)
308 1bpo_A Protein (clathrin); cla 93.8 4.7 0.00016 38.2 25.8 129 102-264 71-206 (494)
309 3s94_A LRP-6, low-density lipo 93.4 7.2 0.00025 39.2 22.7 159 98-288 350-511 (619)
310 3a9g_A Putative uncharacterize 93.3 4.3 0.00015 37.5 17.0 113 97-231 29-153 (354)
311 3amr_A 3-phytase; beta-propell 93.2 5.1 0.00018 36.8 16.8 155 107-286 39-209 (355)
312 4a0p_A LRP6, LRP-6, low-densit 93.1 8.2 0.00028 38.9 27.2 120 178-315 14-135 (628)
313 3ei3_A DNA damage-binding prot 92.8 13 0.00045 40.4 30.1 35 97-131 554-595 (1158)
314 1xi4_A Clathrin heavy chain; a 92.7 11 0.00039 41.4 20.5 151 103-287 72-235 (1630)
315 3amr_A 3-phytase; beta-propell 92.5 6.3 0.00022 36.2 20.2 129 158-294 130-271 (355)
316 3sre_A PON1, serum paraoxonase 92.4 6.7 0.00023 36.2 20.9 102 213-318 51-180 (355)
317 2xzh_A Clathrin heavy chain 1; 92.0 6.9 0.00024 35.5 19.8 172 97-290 152-335 (365)
318 4a0p_A LRP6, LRP-6, low-densit 91.6 12 0.00042 37.6 31.7 164 98-296 81-246 (628)
319 1cru_A Protein (soluble quinop 90.7 5.1 0.00017 38.6 14.5 113 158-276 29-163 (454)
320 3sbq_A Nitrous-oxide reductase 89.6 1.5 5E-05 42.9 9.2 85 97-188 323-408 (638)
321 1tl2_A L10, protein (tachylect 89.2 2.3 7.9E-05 36.2 9.2 67 213-287 42-116 (236)
322 2xn4_A Kelch-like protein 2; s 88.6 8.5 0.00029 34.3 13.7 65 222-289 204-278 (302)
323 1bpo_A Protein (clathrin); cla 88.5 17 0.00058 34.5 21.0 172 97-290 151-334 (494)
324 2xn4_A Kelch-like protein 2; s 87.6 9.3 0.00032 34.0 13.2 64 222-288 155-230 (302)
325 2uvk_A YJHT; unknown function, 87.5 17 0.00057 33.3 18.4 97 169-277 21-128 (357)
326 2vpj_A Kelch-like protein 12; 87.2 8.5 0.00029 34.3 12.7 64 222-288 159-232 (301)
327 2wg3_C Hedgehog-interacting pr 86.1 20 0.00069 34.4 15.1 29 98-126 15-44 (463)
328 2vpj_A Kelch-like protein 12; 85.5 19 0.00065 31.9 16.8 65 222-289 206-280 (301)
329 4asc_A Kelch repeat and BTB do 85.4 8.2 0.00028 34.7 11.6 64 222-288 196-278 (315)
330 3ii7_A Kelch-like protein 7; p 85.3 20 0.00067 31.9 16.3 65 222-289 200-274 (306)
331 1zgk_A Kelch-like ECH-associat 84.5 6.9 0.00024 35.1 10.7 64 222-288 168-241 (308)
332 3ii7_A Kelch-like protein 7; p 83.4 24 0.00081 31.3 16.6 65 222-289 55-129 (306)
333 3das_A Putative oxidoreductase 82.5 30 0.001 31.8 25.3 111 158-277 34-160 (347)
334 1xi4_A Clathrin heavy chain; a 80.5 51 0.0017 36.6 16.3 170 99-295 108-297 (1630)
335 2woz_A Kelch repeat and BTB do 79.7 9.4 0.00032 34.4 9.7 64 222-288 206-288 (318)
336 1zgk_A Kelch-like ECH-associat 78.5 36 0.0012 30.2 16.8 64 222-288 215-288 (308)
337 2zwa_A Leucine carboxyl methyl 76.8 65 0.0022 32.8 15.8 164 99-288 443-636 (695)
338 2wg3_C Hedgehog-interacting pr 75.3 48 0.0017 31.8 13.5 117 158-278 16-160 (463)
339 2uvk_A YJHT; unknown function, 75.2 30 0.001 31.5 11.9 55 235-291 286-346 (357)
340 2woz_A Kelch repeat and BTB do 74.2 48 0.0016 29.5 13.0 64 222-288 158-232 (318)
341 2zwa_A Leucine carboxyl methyl 73.3 25 0.00084 35.9 11.6 68 221-289 499-579 (695)
342 3sbq_A Nitrous-oxide reductase 72.3 26 0.00088 34.4 10.4 74 213-287 324-408 (638)
343 3s25_A Hypothetical 7-bladed b 69.8 61 0.0021 28.9 15.6 64 218-289 110-178 (302)
344 4gq2_M Nucleoporin NUP120; bet 68.9 44 0.0015 35.5 12.6 33 212-245 236-268 (950)
345 4asc_A Kelch repeat and BTB do 68.5 64 0.0022 28.6 13.9 64 222-288 148-222 (315)
346 4gq2_M Nucleoporin NUP120; bet 59.8 11 0.00037 40.2 5.8 38 257-294 236-273 (950)
347 3ei3_A DNA damage-binding prot 58.2 2.1E+02 0.0072 31.1 28.5 112 158-286 516-635 (1158)
348 3q6k_A 43.2 kDa salivary prote 57.6 1.2E+02 0.0041 28.1 12.6 84 256-351 151-246 (381)
349 2be1_A Serine/threonine-protei 55.9 16 0.00056 33.4 5.6 65 231-296 64-139 (339)
350 3s25_A Hypothetical 7-bladed b 55.9 1.1E+02 0.0038 27.2 16.7 67 217-289 150-218 (302)
351 2be1_A Serine/threonine-protei 55.5 29 0.00099 31.7 7.2 61 226-289 113-185 (339)
352 4fhn_B Nucleoporin NUP120; pro 50.3 11 0.00038 41.1 4.1 38 258-295 239-276 (1139)
353 3ott_A Two-component system se 50.2 2.2E+02 0.0076 29.0 21.5 180 97-317 63-246 (758)
354 3f7f_A Nucleoporin NUP120; nuc 45.9 23 0.0008 35.9 5.2 37 258-296 223-259 (729)
355 3ott_A Two-component system se 42.0 2.9E+02 0.01 28.0 19.1 172 97-289 373-547 (758)
356 3b7f_A Glycosyl hydrolase, BNR 40.0 2.2E+02 0.0076 26.0 15.5 72 212-284 177-259 (394)
357 3zwu_A Alkaline phosphatase PH 37.8 86 0.0029 31.1 7.8 58 214-274 478-548 (592)
358 3f7f_A Nucleoporin NUP120; nuc 37.1 48 0.0017 33.6 5.9 35 97-133 222-256 (729)
359 4a9v_A PHOX; hydrolase, beta-p 36.1 1.3E+02 0.0045 29.6 8.6 61 212-275 476-549 (592)
360 4fhn_B Nucleoporin NUP120; pro 30.1 32 0.0011 37.5 3.7 36 98-133 239-274 (1139)
361 3zwu_A Alkaline phosphatase PH 23.9 1.5E+02 0.0051 29.4 6.8 15 260-274 479-493 (592)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2e-40 Score=324.53 Aligned_cols=306 Identities=13% Similarity=0.187 Sum_probs=235.3
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
+..|...|++++|+|++.+||+|+.||+|+|||+.+..... .+.+|... |.+++|+|++. +|
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~--------------~l~~h~~~---V~~v~~~~~~~-~l 165 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER--------------TLKGHTDS---VQDISFDHSGK-LL 165 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCE--------------EECCCSSC---EEEEEECTTSS-EE
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE--------------EEeccCCc---EEEEEEcCCCC-EE
Confidence 45677889999999999999999999999999998844332 23456666 99999999985 88
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceee
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLEL 251 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 251 (489)
++|+.| ++|++||+... . ...++.+|...|.+++|+|++. +|++|+.|++|++||++++. ++..
T Consensus 166 ~sgs~D-~~i~iwd~~~~-----~-------~~~~~~~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~~~--~~~~ 229 (410)
T 1vyh_C 166 ASCSAD-MTIKLWDFQGF-----E-------CIRTMHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQTGY--CVKT 229 (410)
T ss_dssp EEEETT-SCCCEEETTSS-----C-------EEECCCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCC--EEEE
T ss_pred EEEeCC-CeEEEEeCCCC-----c-------eeEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCc--EEEE
Confidence 889888 99999999322 1 2233478999999999999998 99999999999999999887 7777
Q ss_pred ccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceeeccce
Q 037120 252 STGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEI 331 (489)
Q Consensus 252 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i 331 (489)
+.+|...|.+++|+|++.++++++.|++|++||++++++...+..|... |.+++|+|++.+........ .
T Consensus 230 ~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~----v~~~~~~~~~~~~~~~~~~~------~ 299 (410)
T 1vyh_C 230 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHV----VECISWAPESSYSSISEATG------S 299 (410)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC----EEEEEECCSCGGGGGGGCCS------C
T ss_pred EeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCce----EEEEEEcCcccccchhhhcc------c
Confidence 8899999999999999999999999999999999999988899999877 99999999876542111000 0
Q ss_pred eEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEE
Q 037120 332 HSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLL 411 (489)
Q Consensus 332 ~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vw 411 (489)
......+.+.++++++.|+. ..++++..+........ . ...+..++|+|+ +.++++|+.|+.|+||
T Consensus 300 ~~~~~~~~g~~l~sgs~D~~-i~iwd~~~~~~~~~~~~------h------~~~v~~v~~~~~-g~~l~s~s~D~~i~vw 365 (410)
T 1vyh_C 300 ETKKSGKPGPFLLSGSRDKT-IKMWDVSTGMCLMTLVG------H------DNWVRGVLFHSG-GKFILSCADDKTLRVW 365 (410)
T ss_dssp C-------CCEEEEEETTSE-EEEEETTTTEEEEEEEC------C------SSCEEEEEECSS-SSCEEEEETTTEEEEE
T ss_pred cccccCCCCCEEEEEeCCCe-EEEEECCCCceEEEEEC------C------CCcEEEEEEcCC-CCEEEEEeCCCeEEEE
Confidence 11122334666666665554 23444433332221110 0 011223455554 5678889999999999
Q ss_pred eccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEec
Q 037120 412 DFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQ 477 (489)
Q Consensus 412 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~ 477 (489)
|+.++ +.+..+. +|.+.|++++|+|++++||+|+.||+|+||..
T Consensus 366 d~~~~----------~~~~~~~------------~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 366 DYKNK----------RCMKTLN------------AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CCTTS----------CCCEEEE------------CCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred ECCCC----------ceEEEEc------------CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 99888 7777777 99999999999999999999999999999963
No 2
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.5e-39 Score=309.59 Aligned_cols=298 Identities=15% Similarity=0.148 Sum_probs=210.0
Q ss_pred ccCCCceeEEEECCCCcEEEEEec------CCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCC
Q 037120 93 SFGKPGISALDFDCKGIYLVSATR------SGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLA 166 (489)
Q Consensus 93 ~~~~~~V~~~~fs~~g~~la~g~~------dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~ 166 (489)
..|+..|++++|+|||++||+|+. |+.|++|+..+...... .......|... |.+++|+|+
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~----------~~~~~~~~~~~---V~~~~~s~d 105 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNES----------LCTAGVQTEAG---VTDVAWVSE 105 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGG----------GCSEEEECSSC---EEEEEEETT
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCccee----------EecccCCCCCC---EEEEEEcCC
Confidence 446677999999999999999997 78899998876432221 11112345555 999999998
Q ss_pred CCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCc
Q 037120 167 NQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVL 246 (489)
Q Consensus 167 ~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~ 246 (489)
+ .+++++.| |+|+|||+....... .. . ....+|...|++++|+|+++ +|++++.|+.|++||+++++
T Consensus 106 ~--~~l~~s~d-g~v~lWd~~~~~~~~--~~--~----~~~~~h~~~V~~v~~spdg~-~l~sgs~dg~v~iwd~~~~~- 172 (357)
T 4g56_B 106 K--GILVASDS-GAVELWEILEKESLL--VN--K----FAKYEHDDIVKTLSVFSDGT-QAVSGGKDFSVKVWDLSQKA- 172 (357)
T ss_dssp T--EEEEEETT-SCEEEC--------C--CC--C----EEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTTE-
T ss_pred C--CEEEEECC-CEEEEeeccccceeE--EE--e----eccCCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCc-
Confidence 6 34556666 999999995432211 10 1 11267999999999999999 99999999999999999876
Q ss_pred CceeeccCCCCceeEEEEeecCC-EEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccce
Q 037120 247 PSLELSTGSHGTLNSIQLHAENQ-IIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSK 325 (489)
Q Consensus 247 ~~~~~~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~ 325 (489)
++..+.+|...|++++|+|++. ++++++.||+|++||+++++.+..+..+... ..+++++|+|++.
T Consensus 173 -~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~--~~v~~v~~sp~~~---------- 239 (357)
T 4g56_B 173 -VLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASD--TIPTSVTWHPEKD---------- 239 (357)
T ss_dssp -EEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCC--SCEEEEEECTTST----------
T ss_pred -EEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeecccc--ccccchhhhhccc----------
Confidence 6667789999999999999886 6788888999999999998876555432211 2266666666543
Q ss_pred eeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCC
Q 037120 326 IVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSD 405 (489)
Q Consensus 326 ~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d 405 (489)
.+++.+..++...++++..+........ . ...+..++|+|+++.+|++|+.|
T Consensus 240 ----------------~~la~g~~d~~i~~wd~~~~~~~~~~~~------~------~~~v~~l~~sp~~~~~lasgs~D 291 (357)
T 4g56_B 240 ----------------DTFACGDETGNVSLVNIKNPDSAQTSAV------H------SQNITGLAYSYHSSPFLASISED 291 (357)
T ss_dssp ----------------TEEEEEESSSCEEEEESSCGGGCEEECC------C------SSCEEEEEECSSSSCCEEEEETT
T ss_pred ----------------ceEEEeecccceeEEECCCCcEeEEEec------c------ceeEEEEEEcCCCCCEEEEEeCC
Confidence 2222222222223444444333221111 0 01234568888888999999999
Q ss_pred CcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeC-CCCeEEeccCcceeEEEecccc
Q 037120 406 HGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHP-LNNTIVAGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 406 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p-~~~~i~sgs~dg~i~v~~~~~~ 480 (489)
++|+|||+.++ +.+.. . +|.+.|++++|+| ++.+|||||.||+|++|....+
T Consensus 292 ~~i~iwd~~~~----------~~~~~-~------------~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 292 CTVAVLDADFS----------EVFRD-L------------SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp SCEEEECTTSC----------EEEEE-C------------CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred CEEEEEECCCC----------cEeEE-C------------CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 99999999888 55543 3 6999999999999 6789999999999999986543
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=307.03 Aligned_cols=306 Identities=12% Similarity=0.121 Sum_probs=208.3
Q ss_pred CCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCccccc-ccccCCCCCCceeEEEeeCCCCCEEEE
Q 037120 95 GKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQS-KHLLHIPLPQQLDAVRWNLANQDEVAC 173 (489)
Q Consensus 95 ~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~-~~~~h~~~~~~V~~v~~~~~~~~~l~s 173 (489)
+...|.+++|+|||++|++++ |+++++||........... +...... ....|... |.+++|+|++ .+++
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~----~~~~~~~~~~~~~~~~---v~~~~~s~d~--~l~~ 98 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCA----APNEGFCSAGVQTEAG---VADLTWVGER--GILV 98 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGG----TTCGGGCSEEEEESSC---EEEEEEETTT--EEEE
T ss_pred ccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccc----cCCcceeeeeeccCCC---EEEEEEeCCC--eEEE
Confidence 445699999999999999887 7788888743211100000 0000000 01112333 9999999985 6778
Q ss_pred EecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeecc
Q 037120 174 ASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELST 253 (489)
Q Consensus 174 ~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 253 (489)
++.| |+|+|||+..+... ..+ ...+.+|...|++++|+|+++ +|++|+.|++|++||+++++ ++..+.
T Consensus 99 ~s~d-g~v~lWd~~~~~~~--~~~------~~~~~~H~~~V~~v~~spdg~-~l~sgs~d~~i~iwd~~~~~--~~~~~~ 166 (344)
T 4gqb_B 99 ASDS-GAVELWELDENETL--IVS------KFCKYEHDDIVSTVSVLSSGT-QAVSGSKDICIKVWDLAQQV--VLSSYR 166 (344)
T ss_dssp EETT-SEEEEEEECTTSSC--EEE------EEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTE--EEEEEC
T ss_pred EECC-CEEEEEeccCCCce--eEe------eccccCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCc--EEEEEc
Confidence 8877 99999999544211 111 112368999999999999999 99999999999999999876 777888
Q ss_pred CCCCceeEEEEeecCC-EEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceeecccee
Q 037120 254 GSHGTLNSIQLHAENQ-IIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIH 332 (489)
Q Consensus 254 ~h~~~v~~~~~~p~~~-~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~ 332 (489)
+|...|++++|+|++. ++++++.|++|++||+++++.+..+..+... ..+++++|+|++.
T Consensus 167 ~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~----------------- 227 (344)
T 4gqb_B 167 AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPG--YLPTSLAWHPQQS----------------- 227 (344)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----C--CCEEEEEECSSCT-----------------
T ss_pred CcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceee--ccceeeeecCCCC-----------------
Confidence 9999999999999986 6778889999999999998876666432211 2266666666442
Q ss_pred EEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEe
Q 037120 333 SIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLD 412 (489)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd 412 (489)
.+++.+..++-..++++..+....... .. ...+..++|+|++..++++|+.|++|+|||
T Consensus 228 ---------~~l~sg~~dg~v~~wd~~~~~~~~~~~------~h------~~~v~~v~fsp~g~~~lasgs~D~~i~vwd 286 (344)
T 4gqb_B 228 ---------EVFVFGDENGTVSLVDTKSTSCVLSSA------VH------SQCVTGLVFSPHSVPFLASLSEDCSLAVLD 286 (344)
T ss_dssp ---------TEEEEEETTSEEEEEESCC--CCEEEE------CC------SSCEEEEEECSSSSCCEEEEETTSCEEEEC
T ss_pred ---------cceEEeccCCcEEEEECCCCcEEEEEc------CC------CCCEEEEEEccCCCeEEEEEeCCCeEEEEE
Confidence 222222222222333333322211110 00 012344678888888999999999999999
Q ss_pred ccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCC-eEEeccCcceeEEEeccccccccc
Q 037120 413 FFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNN-TIVAGTKNSSLLVVSQKQQCTSDS 485 (489)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~-~i~sgs~dg~i~v~~~~~~~~~~~ 485 (489)
+.++ +.+ .+. +|.+.|++++|||++. +|++||.||+|++|....+.+..+
T Consensus 287 ~~~~----------~~~-~~~------------~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~~~p 337 (344)
T 4gqb_B 287 SSLS----------ELF-RSQ------------AHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPLPAP 337 (344)
T ss_dssp TTCC----------EEE-EEC------------CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC------
T ss_pred CCCC----------cEE-EEc------------CCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCCCCC
Confidence 9887 543 345 8999999999999986 678999999999999887766544
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.3e-38 Score=303.69 Aligned_cols=291 Identities=17% Similarity=0.193 Sum_probs=222.5
Q ss_pred ccccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 91 RRSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 91 ~~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
.+..|...|.+++|+|+|++|++|+.||+|+|||+.+..... .+..|... |.+++|+|++. +
T Consensus 50 ~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~--------------~~~~~~~~---v~~~~~s~~~~-~ 111 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVH--------------AIPLRSSW---VMTCAYAPSGN-Y 111 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEE--------------EEECSSSC---EEEEEECTTSS-E
T ss_pred eecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcce--------------EeecCCcc---EEEEEECCCCC-E
Confidence 356677889999999999999999999999999998744332 12334444 99999999986 8
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCcee
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLE 250 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 250 (489)
+++++.| +.|++||+...... .. ....+.+|...|.++.|++++ .+++++.|++|++||+++++ ++.
T Consensus 112 l~s~~~d-~~v~iw~~~~~~~~----~~----~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~--~~~ 178 (340)
T 1got_B 112 VACGGLD-NICSIYNLKTREGN----VR----VSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQ--QTT 178 (340)
T ss_dssp EEEEETT-CEEEEEETTTCSBS----CE----EEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTE--EEE
T ss_pred EEEEeCC-CeEEEEECccCCCc----ce----eEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCc--EEE
Confidence 8888888 99999999543211 11 122237899999999999876 48999999999999999876 666
Q ss_pred eccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceeeccc
Q 037120 251 LSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQE 330 (489)
Q Consensus 251 ~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~ 330 (489)
.+.+|...|.+++|+|+++++++|+.||+|++||+++++.+..+.+|... |++++|+|++..+++.
T Consensus 179 ~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~----v~~v~~~p~~~~l~s~---------- 244 (340)
T 1got_B 179 TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD----INAICFFPNGNAFATG---------- 244 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSC----EEEEEECTTSSEEEEE----------
T ss_pred EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCC----EEEEEEcCCCCEEEEE----------
Confidence 77799999999999999999999999999999999999888888888877 8888888877666532
Q ss_pred eeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEE
Q 037120 331 IHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHL 410 (489)
Q Consensus 331 i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~v 410 (489)
+.|+. ..+++...+.....+.... . ...+..++|+|+ +.++++|+.|+.|++
T Consensus 245 ----------------s~d~~-v~iwd~~~~~~~~~~~~~~----~------~~~v~~~~~s~~-g~~l~~g~~d~~i~v 296 (340)
T 1got_B 245 ----------------SDDAT-CRLFDLRADQELMTYSHDN----I------ICGITSVSFSKS-GRLLLAGYDDFNCNV 296 (340)
T ss_dssp ----------------ETTSC-EEEEETTTTEEEEEECCTT----C------CSCEEEEEECTT-SSEEEEEETTSEEEE
T ss_pred ----------------cCCCc-EEEEECCCCcEEEEEccCC----c------ccceEEEEECCC-CCEEEEECCCCeEEE
Confidence 22211 1122222221111110000 0 001233456665 567788899999999
Q ss_pred EeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEe
Q 037120 411 LDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVS 476 (489)
Q Consensus 411 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~ 476 (489)
||+.+. +.+..+. +|.+.|++++|+|++.+||+|+.||.|+||.
T Consensus 297 wd~~~~----------~~~~~~~------------~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 297 WDALKA----------DRAGVLA------------GHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EETTTC----------CEEEEEE------------CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEcccC----------cEeeEee------------cCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999888 6777777 9999999999999999999999999999994
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.3e-38 Score=303.66 Aligned_cols=294 Identities=15% Similarity=0.222 Sum_probs=222.9
Q ss_pred ccccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 91 RRSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 91 ~~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
.+..|...|.|++|+|++++||+|+.||+|+|||..+..... ....|... |.+++|+|++. .
T Consensus 59 ~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~--------------~~~~~~~~---v~~~~~sp~g~-~ 120 (354)
T 2pbi_B 59 TLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEH--------------AVTMPCTW---VMACAYAPSGC-A 120 (354)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE--------------EEECSSSC---CCEEEECTTSS-E
T ss_pred EecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcce--------------EEecCCCC---EEEEEECCCCC-E
Confidence 356688889999999999999999999999999987743322 11234444 88999999986 8
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCcee
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLE 250 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 250 (489)
+++++.| +.+++|++....... ...... .+.+|...|.+++|+|++. .|++++.|++|++||+++++ ++.
T Consensus 121 lasg~~d-~~i~v~~~~~~~~~~--~~~~~~----~~~~h~~~v~~~~~~~~~~-~l~t~s~D~~v~lwd~~~~~--~~~ 190 (354)
T 2pbi_B 121 IACGGLD-NKCSVYPLTFDKNEN--MAAKKK----SVAMHTNYLSACSFTNSDM-QILTASGDGTCALWDVESGQ--LLQ 190 (354)
T ss_dssp EEEESTT-SEEEEEECCCCTTCC--SGGGCE----EEEECSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCC--EEE
T ss_pred EEEeeCC-CCEEEEEEecccccc--ccccce----eeeccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEeCCCCe--EEE
Confidence 8888888 999999995432211 111122 2367999999999999998 99999999999999999887 677
Q ss_pred eccCCCCceeEEEEee--cCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceeec
Q 037120 251 LSTGSHGTLNSIQLHA--ENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVS 328 (489)
Q Consensus 251 ~~~~h~~~v~~~~~~p--~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~ 328 (489)
.+.+|...|.+++|+| ++.++++|+.||+|++||+++++++..+..|... |++++|+|++..+++.
T Consensus 191 ~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~----v~~v~~~p~~~~l~s~-------- 258 (354)
T 2pbi_B 191 SFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESD----VNSVRYYPSGDAFASG-------- 258 (354)
T ss_dssp EEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSC----EEEEEECTTSSEEEEE--------
T ss_pred EEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCC----eEEEEEeCCCCEEEEE--------
Confidence 7889999999999988 4689999999999999999999998889888877 8888888877666532
Q ss_pred cceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcE
Q 037120 329 QEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGI 408 (489)
Q Consensus 329 ~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i 408 (489)
+.|+. .+++++..+.....+..... ......++|+|+ +.++++|+.|+.|
T Consensus 259 ------------------s~D~~-v~lwd~~~~~~~~~~~~~~~----------~~~~~~~~~s~~-g~~l~~g~~d~~i 308 (354)
T 2pbi_B 259 ------------------SDDAT-CRLYDLRADREVAIYSKESI----------IFGASSVDFSLS-GRLLFAGYNDYTI 308 (354)
T ss_dssp ------------------ETTSC-EEEEETTTTEEEEEECCTTC----------CSCEEEEEECTT-SSEEEEEETTSCE
T ss_pred ------------------eCCCe-EEEEECCCCcEEEEEcCCCc----------ccceeEEEEeCC-CCEEEEEECCCcE
Confidence 22111 11222222211111110000 001122455555 5678888999999
Q ss_pred EEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEe
Q 037120 409 HLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVS 476 (489)
Q Consensus 409 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~ 476 (489)
+|||+.++ +.+..+. +|.+.|++++|+|++.+||+|+.||.|+||.
T Consensus 309 ~vwd~~~~----------~~~~~l~------------~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 309 NVWDVLKG----------SRVSILF------------GHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEETTTC----------SEEEEEC------------CCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEECCCC----------ceEEEEE------------CCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999888 6666666 9999999999999999999999999999994
No 6
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=304.60 Aligned_cols=322 Identities=11% Similarity=0.132 Sum_probs=219.8
Q ss_pred cccCCC-ceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 92 RSFGKP-GISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 92 ~~~~~~-~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
+..|.. .|.+++|+|+|++||+|+.|++|+|||+........ .....+|... |.+++|+|++. +
T Consensus 11 ~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~-----------~~~~~~h~~~---v~~~~~sp~g~-~ 75 (345)
T 3fm0_A 11 VPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICK-----------SVLSEGHQRT---VRKVAWSPCGN-Y 75 (345)
T ss_dssp ECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEE-----------EEECSSCSSC---EEEEEECTTSS-E
T ss_pred ecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceee-----------eeeccccCCc---EEEEEECCCCC-E
Confidence 455666 699999999999999999999999999977432210 0111356666 99999999985 8
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcC-ce
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLP-SL 249 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~ 249 (489)
|++++.| ++|++||+.... . .....+.+|...|++++|+|+++ +|++++.|++|++||++.+... ++
T Consensus 76 l~s~s~D-~~v~iw~~~~~~------~----~~~~~~~~h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~ 143 (345)
T 3fm0_A 76 LASASFD-ATTCIWKKNQDD------F----ECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECV 143 (345)
T ss_dssp EEEEETT-SCEEEEEECCC-------E----EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEE
T ss_pred EEEEECC-CcEEEEEccCCC------e----EEEEEccCCCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEE
Confidence 8888888 999999984321 1 12233488999999999999999 9999999999999999876432 45
Q ss_pred eeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcc--cceeecCCccCCCCeeEEEeCCCCcceeeccccceee
Q 037120 250 ELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRT--SAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIV 327 (489)
Q Consensus 250 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~--~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~ 327 (489)
..+.+|...|.+++|+|++++|++++.|++|++||+++++. ...+.+|... |++++|+|++.++++......+
T Consensus 144 ~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~----v~~l~~sp~g~~l~s~s~D~~v- 218 (345)
T 3fm0_A 144 SVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHEST----VWSLAFDPSGQRLASCSDDRTV- 218 (345)
T ss_dssp EEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSC----EEEEEECTTSSEEEEEETTSCE-
T ss_pred EEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCc----eEEEEECCCCCEEEEEeCCCeE-
Confidence 56779999999999999999999999999999999988753 5677788877 8888888888777653222111
Q ss_pred ccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCc
Q 037120 328 SQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHG 407 (489)
Q Consensus 328 ~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~ 407 (489)
.++.+........+.....+..|..+......|.. .+..++|.+++ .++++++.|+.
T Consensus 219 --~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--------------------~v~~v~~~~~~-~~l~s~~~d~~ 275 (345)
T 3fm0_A 219 --RIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSR--------------------TIYDIAWCQLT-GALATACGDDA 275 (345)
T ss_dssp --EEEEEECTTCTTCCCCC---CEEEEEEEECSSCSS--------------------CEEEEEECTTT-CCEEEEETTSC
T ss_pred --EEeccccCCCCccceeeccCCccceeEEecCCCCC--------------------cEEEEEEecCC-CEEEEEeCCCe
Confidence 11111111110000000001111111111111111 12335566664 46778889999
Q ss_pred EEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCC-eEEeccCcceeEEEeccccc
Q 037120 408 IHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNN-TIVAGTKNSSLLVVSQKQQC 481 (489)
Q Consensus 408 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~-~i~sgs~dg~i~v~~~~~~~ 481 (489)
|++|+......... ........... +|.+.|++++|+|++. +|||||.||+|+||....+.
T Consensus 276 i~vw~~~~~~~~~~-~~~~~~~~~~~------------~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 276 IRVFQEDPNSDPQQ-PTFSLTAHLHQ------------AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp EEEEEECTTSCTTS-CCEEEEEEETT------------SSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC--
T ss_pred EEEEEeCCCCCcce-eeEEEEeeecc------------cccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCC
Confidence 99999876510000 00000001122 8999999999999985 99999999999999876554
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.1e-38 Score=325.01 Aligned_cols=331 Identities=11% Similarity=0.130 Sum_probs=232.6
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccC-----CC--------CCCCCCc----------------
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCN-----GT--------LPGVGLK---------------- 142 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~-----~~--------~~~~g~~---------------- 142 (489)
+..|...|++++|+|+|++||+|+.||+|+|||+.+...... .. .+. |..
T Consensus 55 ~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~d-g~~l~~~~~~~~~~~~v~~ 133 (611)
T 1nr0_A 55 YTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSE-SKRIAAVGEGRERFGHVFL 133 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTT-SCEEEEEECCSSCSEEEEE
T ss_pred ecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCC-CCEEEEEECCCCceeEEEE
Confidence 556777899999999999999999999999999864321100 00 000 000
Q ss_pred ----ccccccccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEE
Q 037120 143 ----EDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLA 218 (489)
Q Consensus 143 ----~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 218 (489)
.....+.+|... |.+++|+|++...|++++.| ++|++||.... + +..++.+|...|++++
T Consensus 134 wd~~~~~~~l~gh~~~---v~~v~f~p~~~~~l~s~s~D-~~v~lwd~~~~-----~-------~~~~l~~H~~~V~~v~ 197 (611)
T 1nr0_A 134 FDTGTSNGNLTGQARA---MNSVDFKPSRPFRIISGSDD-NTVAIFEGPPF-----K-------FKSTFGEHTKFVHSVR 197 (611)
T ss_dssp TTTCCBCBCCCCCSSC---EEEEEECSSSSCEEEEEETT-SCEEEEETTTB-----E-------EEEEECCCSSCEEEEE
T ss_pred eeCCCCcceecCCCCC---ceEEEECCCCCeEEEEEeCC-CeEEEEECCCC-----e-------EeeeeccccCceEEEE
Confidence 001123456666 99999999987779999988 99999998221 1 2233488999999999
Q ss_pred EecCCCcEEEEEeCCCcEEEEECCCCCcCceeecc-------CCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCccc
Q 037120 219 FSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELST-------GSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTS 291 (489)
Q Consensus 219 ~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-------~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~ 291 (489)
|+|+++ +|++++.|++|++||+++++ +...+. +|.+.|.+++|+|++++|++++.|++|++||+++++++
T Consensus 198 fspdg~-~las~s~D~~i~lwd~~~g~--~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~ 274 (611)
T 1nr0_A 198 YNPDGS-LFASTGGDGTIVLYNGVDGT--KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVE 274 (611)
T ss_dssp ECTTSS-EEEEEETTSCEEEEETTTCC--EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred ECCCCC-EEEEEECCCcEEEEECCCCc--EeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCcee
Confidence 999999 99999999999999998876 444442 79999999999999999999999999999999987654
Q ss_pred cee-------------------------------------------ecCCccCCCCeeEEEeCCCCcceeeccccc----
Q 037120 292 APF-------------------------------------------HNHKEVCHLPLTSLKLASMLEKIGTLKAQS---- 324 (489)
Q Consensus 292 ~~~-------------------------------------------~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~---- 324 (489)
..+ .+|... |++++|+|+++.+++.....
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~----v~~l~~spdg~~l~s~s~D~~v~~ 350 (611)
T 1nr0_A 275 KTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKA----ITALSSSADGKTLFSADAEGHINS 350 (611)
T ss_dssp EEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSC----EEEEEECTTSSEEEEEETTSCEEE
T ss_pred eeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCC----EEEEEEeCCCCEEEEEeCCCcEEE
Confidence 333 356655 99999999998874321000
Q ss_pred -------------eeec---------------------------------------------------------------
Q 037120 325 -------------KIVS--------------------------------------------------------------- 328 (489)
Q Consensus 325 -------------~~~~--------------------------------------------------------------- 328 (489)
..+.
T Consensus 351 Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~ 430 (611)
T 1nr0_A 351 WDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC 430 (611)
T ss_dssp EETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE
T ss_pred EECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEe
Confidence 0011
Q ss_pred ------------------cceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcce
Q 037120 329 ------------------QEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPS 390 (489)
Q Consensus 329 ------------------~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (489)
..+.+++|+|+++++++++.|+. ..++++..+....... ......+..++
T Consensus 431 ~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~-v~lwd~~~~~~~~~~~-----------~~h~~~v~~v~ 498 (611)
T 1nr0_A 431 YKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSK-VHVYKLSGASVSEVKT-----------IVHPAEITSVA 498 (611)
T ss_dssp SSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSE-EEEEEEETTEEEEEEE-----------EECSSCEEEEE
T ss_pred CceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCe-EEEEEccCCceeeeec-----------cCCCCceEEEE
Confidence 12445666666666666555443 1233332221100000 00011234467
Q ss_pred eecCCcEEEEeecCCCcEEEEeccC-CCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCc
Q 037120 391 WLSTNSIYAVGSSSDHGIHLLDFFP-GSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKN 469 (489)
Q Consensus 391 ~~~~~~~~l~sgs~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~d 469 (489)
|+|+ +.++++++.|++|++||+.+ + +...... +.+|.+.|++++|+|++.+||+|+.|
T Consensus 499 fspd-g~~las~s~d~~v~~w~~~~~~----------~~~~~~~----------~~~H~~~V~~v~fspdg~~lasgs~D 557 (611)
T 1nr0_A 499 FSNN-GAFLVATDQSRKVIPYSVANNF----------ELAHTNS----------WTFHTAKVACVSWSPDNVRLATGSLD 557 (611)
T ss_dssp ECTT-SSEEEEEETTSCEEEEEGGGTT----------EESCCCC----------CCCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ECCC-CCEEEEEcCCCCEEEEEcCCCC----------ceeeeee----------eeecccceeEEEECCCCCEEEEEECC
Confidence 7777 45778899999999999987 4 3322200 11599999999999999999999999
Q ss_pred ceeEEEeccc
Q 037120 470 SSLLVVSQKQ 479 (489)
Q Consensus 470 g~i~v~~~~~ 479 (489)
++|+||..+.
T Consensus 558 ~~v~lW~~~~ 567 (611)
T 1nr0_A 558 NSVIVWNMNK 567 (611)
T ss_dssp SCEEEEETTC
T ss_pred CcEEEEECCC
Confidence 9999998764
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=300.34 Aligned_cols=287 Identities=14% Similarity=0.109 Sum_probs=220.2
Q ss_pred cccCCCceeEEEECCC----CcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCC
Q 037120 92 RSFGKPGISALDFDCK----GIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLAN 167 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~----g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~ 167 (489)
...|...|.+++|+|+ +.+||+|+.|++|+||++...... ....+.+|... |.+++|++++
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~------------~~~~l~gh~~~---v~~~~~~~~~ 92 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLD------------LQWSLEGHQLG---VVSVDISHTL 92 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEE------------EEEEECCCSSC---EEEEEECSSS
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCee------------eeeeeccCCCC---EEEEEECCCC
Confidence 4567788999999985 679999999999999998763221 11223567766 9999999998
Q ss_pred CCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcC
Q 037120 168 QDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLP 247 (489)
Q Consensus 168 ~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~ 247 (489)
. ++++++.| ++|++||+..+ ..+ . .+..|...+.+++|+|+++ +|++++.||.|++||+++++
T Consensus 93 ~-~l~s~s~D-~~i~lWd~~~~-----~~~---~----~~~~~~~~~~~~~~spdg~-~l~~g~~dg~v~i~~~~~~~-- 155 (321)
T 3ow8_A 93 P-IAASSSLD-AHIRLWDLENG-----KQI---K----SIDAGPVDAWTLAFSPDSQ-YLATGTHVGKVNIFGVESGK-- 155 (321)
T ss_dssp S-EEEEEETT-SEEEEEETTTT-----EEE---E----EEECCTTCCCCEEECTTSS-EEEEECTTSEEEEEETTTCS--
T ss_pred C-EEEEEeCC-CcEEEEECCCC-----CEE---E----EEeCCCccEEEEEECCCCC-EEEEEcCCCcEEEEEcCCCc--
Confidence 5 88899988 99999999432 211 1 1255778899999999999 99999999999999999876
Q ss_pred ceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceee
Q 037120 248 SLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIV 327 (489)
Q Consensus 248 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~ 327 (489)
....+..|...|.+++|+|++++|++|+.||.|++||+++++.+..+.+|... |++++|+|++..+++....
T Consensus 156 ~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~----v~~l~~spd~~~l~s~s~d---- 227 (321)
T 3ow8_A 156 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMP----IRSLTFSPDSQLLVTASDD---- 227 (321)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC----CCEEEECTTSCEEEEECTT----
T ss_pred eeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCc----eeEEEEcCCCCEEEEEcCC----
Confidence 44456678889999999999999999999999999999999999999988866 8999888888776542211
Q ss_pred ccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCc
Q 037120 328 SQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHG 407 (489)
Q Consensus 328 ~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~ 407 (489)
+. +..+..... .....+.+|...+ ..++|+|+ +.++++|+.|+.
T Consensus 228 ------------g~-i~iwd~~~~--~~~~~~~~h~~~v--------------------~~~~~sp~-~~~l~s~s~D~~ 271 (321)
T 3ow8_A 228 ------------GY-IKIYDVQHA--NLAGTLSGHASWV--------------------LNVAFCPD-DTHFVSSSSDKS 271 (321)
T ss_dssp ------------SC-EEEEETTTC--CEEEEECCCSSCE--------------------EEEEECTT-SSEEEEEETTSC
T ss_pred ------------Ce-EEEEECCCc--ceeEEEcCCCCce--------------------EEEEECCC-CCEEEEEeCCCc
Confidence 11 111111100 1122222332222 22455555 457888999999
Q ss_pred EEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEe
Q 037120 408 IHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVS 476 (489)
Q Consensus 408 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~ 476 (489)
|+|||+.++ +.+..+. +|.+.|.+++|+|++..|++++.||.|+||.
T Consensus 272 v~iwd~~~~----------~~~~~~~------------~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 272 VKVWDVGTR----------TCVHTFF------------DHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp EEEEETTTT----------EEEEEEC------------CCSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred EEEEeCCCC----------EEEEEEc------------CCCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 999999988 7777777 8999999999999999999999999999996
No 9
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2e-37 Score=291.90 Aligned_cols=282 Identities=15% Similarity=0.237 Sum_probs=218.4
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
+..|...|++++|+|+|++||+|+.||.|+||++.+..... .+.+|... |.+++|+|++. +|
T Consensus 19 ~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~--------------~~~~h~~~---v~~~~~~~~~~-~l 80 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK--------------TISGHKLG---ISDVAWSSDSN-LL 80 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE--------------EECCCSSC---EEEEEECTTSS-EE
T ss_pred EcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccch--------------hhccCCCc---eEEEEEcCCCC-EE
Confidence 55677889999999999999999999999999998743332 12445555 99999999985 88
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceee
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLEL 251 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 251 (489)
++++.| +.|++||+... .. ...+.+|...|.+++|+|+++ +|++++.|+.|++||+++++ ++..
T Consensus 81 ~s~~~d-~~i~vwd~~~~-----~~-------~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~--~~~~ 144 (312)
T 4ery_A 81 VSASDD-KTLKIWDVSSG-----KC-------LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGK--CLKT 144 (312)
T ss_dssp EEEETT-SEEEEEETTTC-----CE-------EEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCC--EEEE
T ss_pred EEECCC-CEEEEEECCCC-----cE-------EEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCE--EEEE
Confidence 888888 99999999432 11 122367999999999999999 99999999999999999876 6667
Q ss_pred ccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeec-CCccCCCCeeEEEeCCCCcceeeccccceeeccc
Q 037120 252 STGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHN-HKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQE 330 (489)
Q Consensus 252 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~ 330 (489)
+..|...|.+++|+|+++++++++.||.|++||+++++.+..+.. +... +..++|+|++..++
T Consensus 145 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~------------ 208 (312)
T 4ery_A 145 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP----VSFVKFSPNGKYIL------------ 208 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCC----EEEEEECTTSSEEE------------
T ss_pred ecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCc----eEEEEECCCCCEEE------------
Confidence 778999999999999999999999999999999999877665542 2323 66666666665544
Q ss_pred eeEEEeCCCCCeEEEEEecCCceEEEEe--------eccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEee
Q 037120 331 IHSIDLDPSCSYQLAFHLDDGWSGVLDV--------YNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGS 402 (489)
Q Consensus 331 i~~~~~~p~~~~~~~~~~~~~w~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg 402 (489)
+++.++. ..++++ +.++.....+. ...+.+.++.++++|
T Consensus 209 --------------~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~l~sg 255 (312)
T 4ery_A 209 --------------AATLDNT-LKLWDYSKGKCLKTYTGHKNEKYCI------------------FANFSVTGGKWIVSG 255 (312)
T ss_dssp --------------EEETTTE-EEEEETTTTEEEEEECSSCCSSSCC------------------CEEEECSSSCEEEEC
T ss_pred --------------EEcCCCe-EEEEECCCCcEEEEEEecCCceEEE------------------EEEEEeCCCcEEEEE
Confidence 3222221 112222 22222221111 123444558899999
Q ss_pred cCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEecc--CcceeEEEecc
Q 037120 403 SSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGT--KNSSLLVVSQK 478 (489)
Q Consensus 403 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs--~dg~i~v~~~~ 478 (489)
+.|+.|++||+.++ +.+..+. +|.+.|.+++|||+++.+++++ .||.|+||..+
T Consensus 256 ~~dg~i~vwd~~~~----------~~~~~~~------------~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 256 SEDNLVYIWNLQTK----------EIVQKLQ------------GHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CTTSCEEEEETTTC----------CEEEEEC------------CCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CCCCEEEEEECCCc----------hhhhhhh------------ccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 99999999999988 7777777 9999999999999999999986 69999999754
No 10
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.2e-38 Score=305.85 Aligned_cols=309 Identities=17% Similarity=0.220 Sum_probs=225.1
Q ss_pred ccccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 91 RRSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 91 ~~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
.+..|...|++++|+|+|++||+|+.||+|+|||+.+..... .+.+|... |.+++|+|++. .
T Consensus 61 ~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~--------------~~~~h~~~---v~~~~~s~~g~-~ 122 (380)
T 3iz6_a 61 TLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTH--------------AIKLHCPW---VMECAFAPNGQ-S 122 (380)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEE--------------EEECCCTT---CCCCEECTTSS-E
T ss_pred cccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccce--------------EEecCCCC---EEEEEECCCCC-E
Confidence 366678889999999999999999999999999998744333 12445555 88899999986 8
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCcee
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLE 250 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 250 (489)
|++++.| +.|++||+....... .... ....+.+|...|.++.|.|++...|++|+.|++|++||+++++ ++.
T Consensus 123 las~~~d-~~v~iw~~~~~~~~~-~~~~----~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~--~~~ 194 (380)
T 3iz6_a 123 VACGGLD-SACSIFNLSSQADRD-GNMP----VSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ--RIS 194 (380)
T ss_dssp EEECCSS-SCCEEEECCCCSSCC-CSST----TCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC--EEE
T ss_pred EEEeeCC-CcEEEEECCCCcccc-CCcc----ceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc--EEE
Confidence 8888888 999999995432111 1111 1122488999999999999876689999999999999999876 343
Q ss_pred ec-----cCCCCceeEEEEee-cCCEEEEEeCCCeEEEEEcCC-CcccceeecCCccCCCCeeEEEeCCCCcceeecccc
Q 037120 251 LS-----TGSHGTLNSIQLHA-ENQIIFAAGKHGSIYLWDLRG-GRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQ 323 (489)
Q Consensus 251 ~~-----~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~lwd~~~-~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~ 323 (489)
.+ .+|...|.+++|+| ++.++++|+.||+|++||++. .+.+..+.+|... |++++|+|++..+++
T Consensus 195 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~----v~~v~~~p~~~~l~s---- 266 (380)
T 3iz6_a 195 IFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGD----INSVKFFPDGQRFGT---- 266 (380)
T ss_dssp EECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSC----CCEEEECTTSSEEEE----
T ss_pred EeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCC----eEEEEEecCCCeEEE----
Confidence 33 57899999999987 788999999999999999984 4667888888877 888888877766553
Q ss_pred ceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeec
Q 037120 324 SKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSS 403 (489)
Q Consensus 324 ~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs 403 (489)
++.|+. .++++...+.....+......... ....+..++|+|+| .++++|+
T Consensus 267 ----------------------~s~D~~-i~lwd~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~s~~g-~~l~~g~ 317 (380)
T 3iz6_a 267 ----------------------GSDDGT-CRLFDMRTGHQLQVYNREPDRNDN-----ELPIVTSVAFSISG-RLLFAGY 317 (380)
T ss_dssp ----------------------ECSSSC-EEEEETTTTEEEEEECCCCSSSCC-----SSCSCSEEEECSSS-SEEEEEC
T ss_pred ----------------------EcCCCe-EEEEECCCCcEEEEeccccccccc-----ccCceEEEEECCCC-CEEEEEE
Confidence 222221 123444333333222111000000 00113446777774 5677789
Q ss_pred CCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEecccc
Q 037120 404 SDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 404 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~~~~ 480 (489)
.|+.|++||+..+ +.+..+. ....+|.+.|++++|+|++.+|++||.||.|+||..+..
T Consensus 318 ~dg~i~vwd~~~~----------~~~~~~~--------~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 318 SNGDCYVWDTLLA----------EMVLNLG--------TLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp TTSCEEEEETTTC----------CEEEEEC--------CSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred CCCCEEEEECCCC----------ceEEEEe--------cccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 9999999999877 5544431 001279999999999999999999999999999986643
No 11
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.7e-38 Score=292.91 Aligned_cols=281 Identities=12% Similarity=0.144 Sum_probs=211.1
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
|..|...|.+++|+|+|++||+|+.||+|+|||+.+..... .+..|... |.+++|+|++. +|
T Consensus 9 ~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~--------------~~~~~~~~---v~~~~~~~~~~-~l 70 (304)
T 2ynn_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVR--------------SIQVTETP---VRAGKFIARKN-WI 70 (304)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE--------------EEECCSSC---EEEEEEEGGGT-EE
T ss_pred ecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeE--------------EeeccCCc---EEEEEEeCCCC-EE
Confidence 56677889999999999999999999999999998854433 12345444 99999999985 88
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceee
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLEL 251 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 251 (489)
++++.| ++|++||+..+ .. ...+.+|...|++++|+|+++ +|++|+.|++|++||++++.. +...
T Consensus 71 ~s~s~d-~~i~vwd~~~~-----~~-------~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~-~~~~ 135 (304)
T 2ynn_A 71 IVGSDD-FRIRVFNYNTG-----EK-------VVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWA-LEQT 135 (304)
T ss_dssp EEEETT-SEEEEEETTTC-----CE-------EEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTE-EEEE
T ss_pred EEECCC-CEEEEEECCCC-----cE-------EEEEeCCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcc-hhhh
Confidence 888888 99999999432 11 222378999999999999999 999999999999999987632 3456
Q ss_pred ccCCCCceeEEEEee-cCCEEEEEeCCCeEEEEEcCCCcccceee-cCCccCCCCeeEEEeCCCCcceeeccccceeecc
Q 037120 252 STGSHGTLNSIQLHA-ENQIIFAAGKHGSIYLWDLRGGRTSAPFH-NHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQ 329 (489)
Q Consensus 252 ~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~lwd~~~~~~~~~~~-~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~ 329 (489)
+.+|...|.+++|+| ++..+++|+.|++|++||++++.....+. .|... +..+.|+|.
T Consensus 136 ~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~----v~~~~~~~~---------------- 195 (304)
T 2ynn_A 136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERG----VNYVDYYPL---------------- 195 (304)
T ss_dssp ECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTC----EEEEEECCS----------------
T ss_pred hcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCc----EEEEEEEEc----------------
Confidence 779999999999999 57899999999999999999877655554 33334 666666552
Q ss_pred ceeEEEeCCCCCeEEEEEecCC---ce----EEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEee
Q 037120 330 EIHSIDLDPSCSYQLAFHLDDG---WS----GVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGS 402 (489)
Q Consensus 330 ~i~~~~~~p~~~~~~~~~~~~~---w~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg 402 (489)
+++.++++++.|+. |. ..+..+.+|...+ ..++|+|+ +.++++|
T Consensus 196 --------~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v--------------------~~~~~~p~-~~~l~s~ 246 (304)
T 2ynn_A 196 --------PDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV--------------------SFAVFHPT-LPIIISG 246 (304)
T ss_dssp --------TTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE--------------------EEEEECSS-SSEEEEE
T ss_pred --------CCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCE--------------------EEEEECCC-CCEEEEE
Confidence 23334444443332 21 2222333333222 22345555 4578899
Q ss_pred cCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCC--eEEeccCcceeEEEe
Q 037120 403 SSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNN--TIVAGTKNSSLLVVS 476 (489)
Q Consensus 403 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~--~i~sgs~dg~i~v~~ 476 (489)
+.|+.|+|||+.+. +.+..+. .|.+.|.+++|+|++. ++|+|+.||.+.+--
T Consensus 247 s~Dg~i~iWd~~~~----------~~~~~~~------------~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~ 300 (304)
T 2ynn_A 247 SEDGTLKIWNSSTY----------KVEKTLN------------VGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300 (304)
T ss_dssp ETTSCEEEEETTTC----------CEEEEEC------------CSSSSEEEEEECTTCGGGCEEEEETTEEEEEEC
T ss_pred cCCCeEEEEECCCC----------ceeeecc------------CCCccEEEEEECCCCCceEEEEecCCceEEEEe
Confidence 99999999999998 7777777 8999999999999885 588888877665543
No 12
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.6e-36 Score=312.24 Aligned_cols=326 Identities=13% Similarity=0.195 Sum_probs=235.6
Q ss_pred cccCCCceeEEEECCCCc-EEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 92 RSFGKPGISALDFDCKGI-YLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~-~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
+..|...|++++|+|++. .|++|+.|++|++||..+.++.. .+.+|... |.+++|+|++. +
T Consensus 143 l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~--------------~l~~H~~~---V~~v~fspdg~-~ 204 (611)
T 1nr0_A 143 LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKS--------------TFGEHTKF---VHSVRYNPDGS-L 204 (611)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEE--------------EECCCSSC---EEEEEECTTSS-E
T ss_pred ecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEee--------------eeccccCc---eEEEEECCCCC-E
Confidence 456777899999999987 69999999999999987744332 23456665 99999999986 8
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcC---
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLP--- 247 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~--- 247 (489)
|++++.| ++|++||+..+. .+...........+|...|.+++|+|++. +|++++.|++|++||+++++..
T Consensus 205 las~s~D-~~i~lwd~~~g~-----~~~~~~~~~~~~~~h~~~V~~v~~spdg~-~l~s~s~D~~v~lWd~~~~~~~~~~ 277 (611)
T 1nr0_A 205 FASTGGD-GTIVLYNGVDGT-----KTGVFEDDSLKNVAHSGSVFGLTWSPDGT-KIASASADKTIKIWNVATLKVEKTI 277 (611)
T ss_dssp EEEEETT-SCEEEEETTTCC-----EEEECBCTTSSSCSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEEECC-CcEEEEECCCCc-----EeeeeccccccccccCCCEEEEEECCCCC-EEEEEeCCCeEEEEeCCCCceeeee
Confidence 8889888 999999984331 11111000000137999999999999999 9999999999999999875411
Q ss_pred --------------------------------------ceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCc
Q 037120 248 --------------------------------------SLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGR 289 (489)
Q Consensus 248 --------------------------------------~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~ 289 (489)
+...+.+|...|++++|+|++++|++++.|++|++||+.+++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 278 PVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI 357 (611)
T ss_dssp ECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred cCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc
Confidence 112334899999999999999999999999999999998765
Q ss_pred cccee-ecCCcc--------------------------------------------------------------------
Q 037120 290 TSAPF-HNHKEV-------------------------------------------------------------------- 300 (489)
Q Consensus 290 ~~~~~-~~~~~~-------------------------------------------------------------------- 300 (489)
....+ ..|...
T Consensus 358 ~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~ 437 (611)
T 1nr0_A 358 SNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIY 437 (611)
T ss_dssp EEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEE
T ss_pred eeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEE
Confidence 42221 011000
Q ss_pred ---------CCCCeeEEEeCCCCcceeeccc-----------------cceeeccceeEEEeCCCCCeEEEEEecCCceE
Q 037120 301 ---------CHLPLTSLKLASMLEKIGTLKA-----------------QSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSG 354 (489)
Q Consensus 301 ---------~~~~v~~l~~~~~~~~i~~~~~-----------------~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~ 354 (489)
....+.+++|+|+|+.+++... ....+...|.+++|+|++.++++.+.++.. .
T Consensus 438 ~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v-~ 516 (611)
T 1nr0_A 438 SHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKV-I 516 (611)
T ss_dssp ETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCE-E
T ss_pred eCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCE-E
Confidence 0022678899999988743211 112356789999999999999988877652 3
Q ss_pred EEEeec-cceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCc-cc-ch
Q 037120 355 VLDVYN-SRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNE-DI-ES 431 (489)
Q Consensus 355 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~-~~-~~ 431 (489)
+++... +...... .+. .+...+..++|+|++ .+|++|+.|++|+|||+..+ . .. ..
T Consensus 517 ~w~~~~~~~~~~~~----~~~------~H~~~V~~v~fspdg-~~lasgs~D~~v~lW~~~~~----------~~~~~~~ 575 (611)
T 1nr0_A 517 PYSVANNFELAHTN----SWT------FHTAKVACVSWSPDN-VRLATGSLDNSVIVWNMNKP----------SDHPIII 575 (611)
T ss_dssp EEEGGGTTEESCCC----CCC------CCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTCT----------TSCCEEE
T ss_pred EEEcCCCCceeeee----eee------ecccceeEEEECCCC-CEEEEEECCCcEEEEECCCc----------ccccchh
Confidence 444443 2211100 000 011234557788874 57888999999999999876 3 22 34
Q ss_pred hhHhhhhcccCCcccC-CCceEEEEeeCCCCeEEeccCcceeEEEec
Q 037120 432 LSERTKLKKENRFVPL-SEGVTACVTHPLNNTIVAGTKNSSLLVVSQ 477 (489)
Q Consensus 432 ~~~~~~~~~~~~~~~h-~~~V~~va~~p~~~~i~sgs~dg~i~v~~~ 477 (489)
+. +| .+.|++++|+|++. |++|+.||+|++|..
T Consensus 576 ~~------------~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 576 KG------------AHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp TT------------SSTTSCEEEEEEEETTE-EEEEETTSCEEEEEC
T ss_pred hc------------cCcccCeeEEEEcCCCE-EEEecCCCCEEEEec
Confidence 45 89 89999999999998 999999999999975
No 13
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.5e-36 Score=307.94 Aligned_cols=305 Identities=14% Similarity=0.209 Sum_probs=236.6
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
+..+...|.+++|+|+|++|++++.|+.|++||...... ..+.+|... |.+++|+|++. .+
T Consensus 258 ~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~---------------~~~~~h~~~---v~~~~~~~~~~-~l 318 (577)
T 2ymu_A 258 LTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLL---------------QTLTGHSSS---VWGVAFSPDGQ-TI 318 (577)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEE---------------EEECCCSSC---EEEEEECTTSS-EE
T ss_pred EecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEE---------------EEEecCCCC---eEEEEECCCCC-EE
Confidence 445667799999999999999999999999999765211 112456655 99999999986 78
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceee
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLEL 251 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 251 (489)
++++.| ++|++||+... . ...+.+|...|.+++|+|++. .|++++.|+.|++||.. ++ .+..
T Consensus 319 ~t~~~d-~~i~~w~~~~~-----~--------~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~v~~~~~~-~~--~~~~ 380 (577)
T 2ymu_A 319 ASASDD-KTVKLWNRNGQ-----H--------LQTLTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWNRN-GQ--LLQT 380 (577)
T ss_dssp EEEETT-SCEEEEETTSC-----E--------EEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETT-CC--EEEE
T ss_pred EEEeCC-CeEEEEeCCCC-----e--------eEEEeCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEcCC-CC--EEEE
Confidence 888887 99999998321 1 112377899999999999999 99999999999999964 34 5666
Q ss_pred ccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccc---------
Q 037120 252 STGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKA--------- 322 (489)
Q Consensus 252 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~--------- 322 (489)
+.+|...|.+++|+|++++|++++.|+.|++||. +++.+..+.+|... |++++|+|+++.+++...
T Consensus 381 ~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~----v~~~~~s~d~~~l~~~~~d~~v~~w~~ 455 (577)
T 2ymu_A 381 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS----VWGVAFSPDDQTIASASDDKTVKLWNR 455 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSC----EEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCC----eEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 7799999999999999999999999999999995 56778888899877 999999999988854221
Q ss_pred ------cceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCc
Q 037120 323 ------QSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNS 396 (489)
Q Consensus 323 ------~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (489)
....+...|.+++|+|++.++++++.++. ..+++. ++....... .. ...+..++|+|+ +
T Consensus 456 ~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~-i~iw~~-~~~~~~~~~------~h------~~~v~~l~~s~d-g 520 (577)
T 2ymu_A 456 NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT-VKLWNR-NGQLLQTLT------GH------SSSVRGVAFSPD-G 520 (577)
T ss_dssp TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSE-EEEEET-TSCEEEEEE------CC------SSCEEEEEECTT-S
T ss_pred CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE-EEEEcC-CCCEEEEEe------CC------CCCEEEEEEcCC-C
Confidence 12234678999999999999888776654 223331 121111100 00 012234566666 4
Q ss_pred EEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEe
Q 037120 397 IYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVS 476 (489)
Q Consensus 397 ~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~ 476 (489)
.+|++|+.|+.|+|||. ++ +.+..+. +|.+.|++++|+|++++|+|+|.||+|+||.
T Consensus 521 ~~l~s~~~dg~v~lwd~-~~----------~~~~~~~------------~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 521 QTIASASDDKTVKLWNR-NG----------QLLQTLT------------GHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SCEEEEETTSEEEEECT-TS----------CEEEEEE------------CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CEEEEEECcCEEEEEeC-CC----------CEEEEEc------------CCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 57888999999999996 45 5666677 9999999999999999999999999999995
No 14
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.6e-35 Score=276.83 Aligned_cols=260 Identities=10% Similarity=0.063 Sum_probs=198.5
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCC-CCCE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLA-NQDE 170 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~-~~~~ 170 (489)
+..|...|.+++|+|+|++||+|+.|++|+|||+.... ......+.+|... |.+++|+++ ...+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~------------~~~~~~l~gH~~~---V~~v~~s~~~~g~~ 69 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET------------HKLIDTLTGHEGP---VWRVDWAHPKFGTI 69 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC------------BCCCEEECCCSSC---EEEEEECCGGGCSE
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC------------cEEEEEEccccCC---eEEEEecCCCcCCE
Confidence 45677789999999999999999999999999997521 1111234567766 999999864 2358
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecC--CCcEEEEEeCCCcEEEEECCCCCcCc
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAV--NTSRLIASDTHGVVNIWDRRVGVLPS 248 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~s~dg~i~iwd~~~~~~~~ 248 (489)
|++++.| ++|++||+..+... ... .+.+|...|++++|+|+ +. +|++++.|+.|++||++.+....
T Consensus 70 l~s~s~D-~~v~iWd~~~~~~~------~~~----~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~ 137 (297)
T 2pm7_B 70 LASCSYD-GKVMIWKEENGRWS------QIA----VHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTS 137 (297)
T ss_dssp EEEEETT-TEEEEEEBSSSCBC------CCE----EECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBC
T ss_pred EEEEcCC-CEEEEEEcCCCceE------EEE----EeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCcee
Confidence 9999988 99999999533211 111 23679999999999998 66 99999999999999998764222
Q ss_pred eeeccCCCCceeEEEEeec-------------CCEEEEEeCCCeEEEEEcCCCc----ccceeecCCccCCCCeeEEEeC
Q 037120 249 LELSTGSHGTLNSIQLHAE-------------NQIIFAAGKHGSIYLWDLRGGR----TSAPFHNHKEVCHLPLTSLKLA 311 (489)
Q Consensus 249 ~~~~~~h~~~v~~~~~~p~-------------~~~l~~~~~dg~i~lwd~~~~~----~~~~~~~~~~~~~~~v~~l~~~ 311 (489)
...+.+|...|.+++|+|+ +++|++|+.|++|++||+++++ ....+.+|... |.+++|+
T Consensus 138 ~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~----V~~v~~s 213 (297)
T 2pm7_B 138 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW----VRDVAWS 213 (297)
T ss_dssp CEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC----EEEEEEC
T ss_pred eeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCc----eEEEEEC
Confidence 3355689999999999997 5789999999999999998865 34566677655 6666666
Q ss_pred CCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCccee
Q 037120 312 SMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSW 391 (489)
Q Consensus 312 ~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (489)
|++. .
T Consensus 214 p~~~------------------------------------------------------------~--------------- 218 (297)
T 2pm7_B 214 PTVL------------------------------------------------------------L--------------- 218 (297)
T ss_dssp CCCS------------------------------------------------------------S---------------
T ss_pred CCCC------------------------------------------------------------C---------------
Confidence 5420 0
Q ss_pred ecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcce
Q 037120 392 LSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSS 471 (489)
Q Consensus 392 ~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~ 471 (489)
+.++++|+.|++|+|||+...... .....+. ..+|.+.|.+++|+|++++||+|+.||.
T Consensus 219 ----~~~las~s~D~~v~iWd~~~~~~~-------~~~~~~~----------~~~~~~~v~~~~~s~~g~~las~~~D~~ 277 (297)
T 2pm7_B 219 ----RSYMASVSQDRTCIIWTQDNEQGP-------WKKTLLK----------EEKFPDVLWRASWSLSGNVLALSGGDNK 277 (297)
T ss_dssp ----SEEEEEEETTSCEEEEEESSTTSC-------CEEEESS----------SSCCSSCEEEEEECSSSCCEEEEETTSC
T ss_pred ----ceEEEEEECCCcEEEEEeCCCCCc-------cceeeee----------cccCCCcEEEEEECCCCCEEEEEcCCCc
Confidence 467889999999999999765100 0001110 0168899999999999999999999999
Q ss_pred eEEEecc
Q 037120 472 LLVVSQK 478 (489)
Q Consensus 472 i~v~~~~ 478 (489)
|+||...
T Consensus 278 v~lw~~~ 284 (297)
T 2pm7_B 278 VTLWKEN 284 (297)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999765
No 15
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-36 Score=283.45 Aligned_cols=304 Identities=12% Similarity=0.123 Sum_probs=202.3
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
+..|...|.+++|+|+ +||+|+.|++|+|||+....... .......+|... |.+++|+|++. +|
T Consensus 10 ~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~----------~~~~~~~~h~~~---v~~v~~sp~~~-~l 73 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTL----------IDVLDETAHKKA---IRSVAWRPHTS-LL 73 (330)
T ss_dssp EECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEE----------EEEECTTCCCSC---EEEEEECTTSS-EE
T ss_pred eccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEE----------EEEEecCCccCC---EEEEEECCCCC-EE
Confidence 5567788999999988 99999999999999998632111 000001126555 99999999985 88
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCc--Cce
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVL--PSL 249 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~--~~~ 249 (489)
++++.| ++|+|||+....... . .......+.+|...|++++|+|++. +|++|+.|++|++||++.... .++
T Consensus 74 as~s~D-~~v~iw~~~~~~~~~-~----~~~~~~~~~~h~~~V~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~~~~~~ 146 (330)
T 2hes_X 74 AAGSFD-STVSIWAKEESADRT-F----EMDLLAIIEGHENEVKGVAWSNDGY-YLATCSRDKSVWIWETDESGEEYECI 146 (330)
T ss_dssp EEEETT-SCEEEEEC--------C----CCEEEEEEC----CEEEEEECTTSC-EEEEEETTSCEEEEECCTTCCCCEEE
T ss_pred EEEeCC-CcEEEEEcccCcCcc-c----cceeEEEEcCCCCcEEEEEECCCCC-EEEEEeCCCEEEEEeccCCCCCeEEE
Confidence 889888 999999984321100 0 0112333488999999999999999 999999999999999964321 255
Q ss_pred eeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCC--cccceeecCCccCCCCeeEEEeCCC--Ccceeeccccce
Q 037120 250 ELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGG--RTSAPFHNHKEVCHLPLTSLKLASM--LEKIGTLKAQSK 325 (489)
Q Consensus 250 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~--~~~~~~~~~~~~~~~~v~~l~~~~~--~~~i~~~~~~~~ 325 (489)
..+.+|...|.+++|+|++.+|++++.|++|++||++++ +++..+.+|... |.+++|+|+ +..+++
T Consensus 147 ~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~----v~~~~~~~~~~~~~l~s------ 216 (330)
T 2hes_X 147 SVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGT----VWSSDFDKTEGVFRLCS------ 216 (330)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC----EEEEEECCSSSSCEEEE------
T ss_pred EEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCc----EEEEEecCCCCeeEEEE------
Confidence 667799999999999999999999999999999999876 457788888877 899888887 333332
Q ss_pred eeccceeEEEeCCCCCeEEEEEecCCceEEEEeecccee---eecCCCCCCcCCCCccccccCCCcceeecCCcEEEEee
Q 037120 326 IVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVS---HVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGS 402 (489)
Q Consensus 326 ~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg 402 (489)
++.|+. .++++...+... ...+. ..+.. .....+..++|++. + ++++|
T Consensus 217 --------------------~s~D~~-v~iw~~~~~~~~~~~~~~~~-~~~~~-----~h~~~v~~v~~s~~-~-~l~s~ 267 (330)
T 2hes_X 217 --------------------GSDDST-VRVWKYMGDDEDDQQEWVCE-AILPD-----VHKRQVYNVAWGFN-G-LIASV 267 (330)
T ss_dssp --------------------EETTSC-EEEEEEEEECTTSCEEEEEE-EECCS-----CCSSCEEEEEECTT-S-CEEEE
T ss_pred --------------------EeCCCe-EEEEEecCCCccccceeEEe-eeccc-----ccccceEEEEEcCC-C-EEEEE
Confidence 111111 111221111000 00000 00000 00011233455533 3 78889
Q ss_pred cCCCcEEEEeccCCCCCCeeeccCcc--c-chhhHhhhhcccCCcccCCC-ceEEEEeeC--CCCeEEeccCcceeEEEe
Q 037120 403 SSDHGIHLLDFFPGSSSPSHVDYNED--I-ESLSERTKLKKENRFVPLSE-GVTACVTHP--LNNTIVAGTKNSSLLVVS 476 (489)
Q Consensus 403 s~d~~i~vwd~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~h~~-~V~~va~~p--~~~~i~sgs~dg~i~v~~ 476 (489)
+.|+.|+|||..++ +. . .... +|.. .|++++|+| ++.+||+|+.||.|+||.
T Consensus 268 ~~dg~v~iw~~~~~----------~~~~~~~~~~------------~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~ 325 (330)
T 2hes_X 268 GADGVLAVYEEVDG----------EWKVFAKRAL------------CHGVYEINVVKWLELNGKTILATGGDDGIVNFWS 325 (330)
T ss_dssp ETTSCEEEEEEETT----------EEEEEEEESC------------TTTTSCEEEEEEC-----CCEEEEETTSEEEEEE
T ss_pred eCCCEEEEEEcCCC----------ceEEEecccc------------ccccceEEEEEEecCCCceEEEEecCCCcEEEEE
Confidence 99999999998765 21 1 1122 6877 899999999 678999999999999998
Q ss_pred ccc
Q 037120 477 QKQ 479 (489)
Q Consensus 477 ~~~ 479 (489)
.++
T Consensus 326 ~~~ 328 (330)
T 2hes_X 326 LEK 328 (330)
T ss_dssp C--
T ss_pred ecc
Confidence 653
No 16
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.9e-35 Score=299.44 Aligned_cols=309 Identities=14% Similarity=0.211 Sum_probs=237.8
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
+..+...|.+++|+|+|.+|++|+.|+.|++||..... .. .+.+|... |.+++|+|++. .+
T Consensus 217 ~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~~~-~~--------------~~~~~~~~---v~~v~~~~d~~-~l 277 (577)
T 2ymu_A 217 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQL-LQ--------------TLTGHSSS---VNGVAFRPDGQ-TI 277 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE-EE--------------EECCCSSC---EEEEEECTTSS-EE
T ss_pred EecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCCE-EE--------------EEecCCCC---EEEEEEcCCCC-EE
Confidence 34566779999999999999999999999999975421 11 12445555 99999999986 77
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceee
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLEL 251 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 251 (489)
++++.| +.|++||... .. ...+.+|...|.+++|+|++. .|++++.|+.|++||+... .+..
T Consensus 278 ~~~~~d-~~i~~w~~~~------~~-------~~~~~~h~~~v~~~~~~~~~~-~l~t~~~d~~i~~w~~~~~---~~~~ 339 (577)
T 2ymu_A 278 ASASDD-KTVKLWNRNG------QL-------LQTLTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWNRNGQ---HLQT 339 (577)
T ss_dssp EEEETT-SCEEEEETTS------CE-------EEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTSC---EEEE
T ss_pred EEEeCC-CEEEEEeCCC------cE-------EEEEecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEeCCCC---eeEE
Confidence 888877 9999999721 11 122378999999999999999 9999999999999998654 3446
Q ss_pred ccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccc---------
Q 037120 252 STGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKA--------- 322 (489)
Q Consensus 252 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~--------- 322 (489)
+.+|...|.+++|+|+++++++++.||.|++||. +++.+..+..|... |++++|+|+++.+++...
T Consensus 340 ~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~----v~~~~~s~dg~~l~~~~~d~~v~~~~~ 414 (577)
T 2ymu_A 340 LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS----VRGVAFSPDGQTIASASDDKTVKLWNR 414 (577)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSC----EEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred EeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCC----eEEEEECCCCCEEEEEeCCCEEEEEeC
Confidence 6789999999999999999999999999999995 56778888898877 999999999998854221
Q ss_pred ------cceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCc
Q 037120 323 ------QSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNS 396 (489)
Q Consensus 323 ------~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (489)
....+...|..++|+|++.++++++.++. ..+++. .+....... .. ...+..++|+|+ +
T Consensus 415 ~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~-v~~w~~-~~~~~~~~~------~~------~~~v~~~~~spd-~ 479 (577)
T 2ymu_A 415 NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKT-VKLWNR-NGQLLQTLT------GH------SSSVRGVAFSPD-G 479 (577)
T ss_dssp TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-EEEEET-TSCEEEEEE------CC------SSCEEEEEECTT-S
T ss_pred CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCE-EEEEEC-CCCEEEEEc------CC------CCCEEEEEEcCC-C
Confidence 12235678999999999999888776654 123332 111111000 00 011233566665 5
Q ss_pred EEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEe
Q 037120 397 IYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVS 476 (489)
Q Consensus 397 ~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~ 476 (489)
.++++++.|+.|+|||. ++ +.+..+. +|...|++++|+|++.+||+|+.||.|+||.
T Consensus 480 ~~las~~~d~~i~iw~~-~~----------~~~~~~~------------~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 480 QTIASASDDKTVKLWNR-NG----------QLLQTLT------------GHSSSVRGVAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp CEEEEEETTSEEEEEET-TS----------CEEEEEE------------CCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CEEEEEeCCCEEEEEcC-CC----------CEEEEEe------------CCCCCEEEEEEcCCCCEEEEEECcCEEEEEe
Confidence 67888899999999996 45 5666677 9999999999999999999999999999998
Q ss_pred cccc
Q 037120 477 QKQQ 480 (489)
Q Consensus 477 ~~~~ 480 (489)
...+
T Consensus 537 ~~~~ 540 (577)
T 2ymu_A 537 RNGQ 540 (577)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 5443
No 17
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-35 Score=286.97 Aligned_cols=314 Identities=13% Similarity=0.166 Sum_probs=210.0
Q ss_pred cCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCccccc-ccccCCCCCCceeEEEeeCCCCCEEE
Q 037120 94 FGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQS-KHLLHIPLPQQLDAVRWNLANQDEVA 172 (489)
Q Consensus 94 ~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~-~~~~h~~~~~~V~~v~~~~~~~~~l~ 172 (489)
.|...|.|++|+|+|++||+|+ ++.++||++.++...............+.. ...........|.+++|+|++. +|+
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~-~l~ 139 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK-FLA 139 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSS-EEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC-EEE
Confidence 3667799999999999999987 689999999876544321000000000000 0000001112389999999986 788
Q ss_pred EEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeec
Q 037120 173 CASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELS 252 (489)
Q Consensus 173 s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 252 (489)
+++.| ++|++||+... . ....+.+|...|++++|+|++. +|++++.|++|++||+++++ +...+
T Consensus 140 s~~~d-~~i~iwd~~~~-----~-------~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~v~iwd~~~~~--~~~~~ 203 (393)
T 1erj_A 140 TGAED-RLIRIWDIENR-----K-------IVMILQGHEQDIYSLDYFPSGD-KLVSGSGDRTVRIWDLRTGQ--CSLTL 203 (393)
T ss_dssp EEETT-SCEEEEETTTT-----E-------EEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTE--EEEEE
T ss_pred EEcCC-CeEEEEECCCC-----c-------EEEEEccCCCCEEEEEEcCCCC-EEEEecCCCcEEEEECCCCe--eEEEE
Confidence 88888 99999999422 1 1223478999999999999999 99999999999999999876 44333
Q ss_pred cCCCCceeEEEEee-cCCEEEEEeCCCeEEEEEcCCCccccee-------ecCCccCCCCeeEEEeCCCCcceeeccccc
Q 037120 253 TGSHGTLNSIQLHA-ENQIIFAAGKHGSIYLWDLRGGRTSAPF-------HNHKEVCHLPLTSLKLASMLEKIGTLKAQS 324 (489)
Q Consensus 253 ~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~lwd~~~~~~~~~~-------~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~ 324 (489)
.+...+.+++|+| ++.++++|+.||.|++||+++++.+..+ .+|... |.+++|+|++..+++.....
T Consensus 204 -~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~----v~~v~~~~~g~~l~s~s~d~ 278 (393)
T 1erj_A 204 -SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS----VYSVVFTRDGQSVVSGSLDR 278 (393)
T ss_dssp -ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSC----EEEEEECTTSSEEEEEETTS
T ss_pred -EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCC----EEEEEECCCCCEEEEEeCCC
Confidence 4567899999999 8999999999999999999998876655 345544 77777777776665422111
Q ss_pred eeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecC
Q 037120 325 KIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSS 404 (489)
Q Consensus 325 ~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~ 404 (489)
.+. ++.+. .... ........ -......+.+|...+ ..++|.++ +.++++|+.
T Consensus 279 ~v~---~wd~~--~~~~-~~~~~~~~-~~~~~~~~~~h~~~v--------------------~~~~~~~~-~~~l~sgs~ 330 (393)
T 1erj_A 279 SVK---LWNLQ--NANN-KSDSKTPN-SGTCEVTYIGHKDFV--------------------LSVATTQN-DEYILSGSK 330 (393)
T ss_dssp EEE---EEEC-------------------CEEEEEECCSSCE--------------------EEEEECGG-GCEEEEEET
T ss_pred EEE---EEECC--CCCC-cccccCCC-CCcceEEEecccCcE--------------------EEEEECCC-CCEEEEEeC
Confidence 111 11100 0000 00000000 000111112222211 22344444 568889999
Q ss_pred CCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeC------CCCeEEeccCcceeEEEecc
Q 037120 405 DHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHP------LNNTIVAGTKNSSLLVVSQK 478 (489)
Q Consensus 405 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p------~~~~i~sgs~dg~i~v~~~~ 478 (489)
|+.|++||+.++ +.+..+. +|.+.|.+++|+| ++++||+|+.||+|+||..+
T Consensus 331 D~~v~iwd~~~~----------~~~~~l~------------~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 331 DRGVLFWDKKSG----------NPLLMLQ------------GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp TSEEEEEETTTC----------CEEEEEE------------CCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred CCeEEEEECCCC----------eEEEEEC------------CCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 999999999988 7777777 9999999999886 67899999999999999876
Q ss_pred cc
Q 037120 479 QQ 480 (489)
Q Consensus 479 ~~ 480 (489)
+.
T Consensus 389 ~~ 390 (393)
T 1erj_A 389 KI 390 (393)
T ss_dssp EC
T ss_pred cc
Confidence 53
No 18
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.3e-34 Score=276.44 Aligned_cols=305 Identities=11% Similarity=0.112 Sum_probs=210.8
Q ss_pred ccccCCCceeEEEE-----CC-CCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEee
Q 037120 91 RRSFGKPGISALDF-----DC-KGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWN 164 (489)
Q Consensus 91 ~~~~~~~~V~~~~f-----s~-~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~ 164 (489)
.+..|...|++++| ++ ++++||+|+.|++|+|||+........ .......+.+|... |.+++|+
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~-------~~~~~~~l~~h~~~---V~~~~~~ 85 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGY-------FGIPHKALTGHNHF---VSDLALS 85 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSB-------SEEEEEEECCCSSC---EEEEEEC
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccc-------cccccchhccCCCc---eEEEEEC
Confidence 35667788999999 76 899999999999999999976322110 01222334567777 9999999
Q ss_pred CCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCC
Q 037120 165 LANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVG 244 (489)
Q Consensus 165 ~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~ 244 (489)
|++. ++++++.| ++|++||++.+ .. ...+.+|...|.+++|+|++. +|++++.|++|++||+...
T Consensus 86 ~~~~-~l~s~s~D-~~v~lwd~~~~-----~~-------~~~~~~h~~~v~~v~~sp~~~-~l~s~~~d~~i~~wd~~~~ 150 (343)
T 2xzm_R 86 QENC-FAISSSWD-KTLRLWDLRTG-----TT-------YKRFVGHQSEVYSVAFSPDNR-QILSAGAEREIKLWNILGE 150 (343)
T ss_dssp SSTT-EEEEEETT-SEEEEEETTSS-----CE-------EEEEECCCSCEEEEEECSSTT-EEEEEETTSCEEEEESSSC
T ss_pred CCCC-EEEEEcCC-CcEEEEECCCC-----cE-------EEEEcCCCCcEEEEEECCCCC-EEEEEcCCCEEEEEeccCC
Confidence 9985 88888888 99999999432 11 222378999999999999999 9999999999999999843
Q ss_pred CcCceeeccCCCCceeEEEEeecC----------CEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCC
Q 037120 245 VLPSLELSTGSHGTLNSIQLHAEN----------QIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASML 314 (489)
Q Consensus 245 ~~~~~~~~~~h~~~v~~~~~~p~~----------~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 314 (489)
..........|...|.+++|+|++ .++++++.||.|++||. .++....+.+|... |++++|+|++
T Consensus 151 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~----v~~~~~s~~g 225 (343)
T 2xzm_R 151 CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESN----VNHLSISPNG 225 (343)
T ss_dssp EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSC----EEEEEECTTS
T ss_pred ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCcccc----ceEEEECCCC
Confidence 211111223788999999999987 78999999999999994 45556777788766 8888888777
Q ss_pred cceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeecc-ceeeecCCCCCCcCCCCccccccCCCcceeec
Q 037120 315 EKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNS-RVSHVHCPPPAWLSDSNNSADQLHLRKPSWLS 393 (489)
Q Consensus 315 ~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (489)
.++++. +.|+. ..++++... ..... +... ..+..++|+|
T Consensus 226 ~~l~sg--------------------------s~dg~-v~iwd~~~~~~~~~~------~~~~-------~~v~~v~~sp 265 (343)
T 2xzm_R 226 KYIATG--------------------------GKDKK-LLIWDILNLTYPQRE------FDAG-------STINQIAFNP 265 (343)
T ss_dssp SEEEEE--------------------------ETTCE-EEEEESSCCSSCSEE------EECS-------SCEEEEEECS
T ss_pred CEEEEE--------------------------cCCCe-EEEEECCCCccccee------ecCC-------CcEEEEEECC
Confidence 666542 22211 112222110 00000 0000 1123466777
Q ss_pred CCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccc--hhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcce
Q 037120 394 TNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIE--SLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSS 471 (489)
Q Consensus 394 ~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~ 471 (489)
++. ++++ +.|+.|++||+.+. +... .+... .........+|...|++++|+|+++.|++|+.||.
T Consensus 266 ~~~-~la~-~~d~~v~iw~~~~~----------~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~ 332 (343)
T 2xzm_R 266 KLQ-WVAV-GTDQGVKIFNLMTQ----------SKAPVCTIEAE-PITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGV 332 (343)
T ss_dssp SSC-EEEE-EESSCEEEEESSSC----------CSCSEEECCCC-SGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSE
T ss_pred CCC-EEEE-ECCCCEEEEEeCCC----------CCCceEEeecC-cchhhhhhcCCCCceEEEEECCCCCeEEEecCCce
Confidence 754 4444 46888999999876 2211 11000 00001112378899999999999999999999999
Q ss_pred eEEEecc
Q 037120 472 LLVVSQK 478 (489)
Q Consensus 472 i~v~~~~ 478 (489)
|++|..+
T Consensus 333 v~~w~~~ 339 (343)
T 2xzm_R 333 IRTFSFE 339 (343)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999765
No 19
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.1e-34 Score=273.93 Aligned_cols=298 Identities=11% Similarity=0.106 Sum_probs=214.2
Q ss_pred ccccCCCceeEEEECCCC-cEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCC
Q 037120 91 RRSFGKPGISALDFDCKG-IYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQD 169 (489)
Q Consensus 91 ~~~~~~~~V~~~~fs~~g-~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~ 169 (489)
++..|...|.+++|+|++ ++|++|+.|++|++|++....... ..+...+.+|... |.+++|+|++.
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~---------~~~~~~~~~h~~~---v~~~~~s~dg~- 78 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKF---------GVPVRSFKGHSHI---VQDCTLTADGA- 78 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEE---------EEEEEEEECCSSC---EEEEEECTTSS-
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccc---------cccceEEeCCccc---EEEEEECCCCC-
Confidence 466788889999999965 899999999999999987522111 1122234567776 99999999986
Q ss_pred EEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCce
Q 037120 170 EVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSL 249 (489)
Q Consensus 170 ~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 249 (489)
+|++++.| ++|++||+..+ .. ...+.+|...|.+++|+|++. +|++++.|++|++||++. . ++
T Consensus 79 ~l~s~s~D-~~v~~wd~~~~-----~~-------~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~~-~--~~ 141 (319)
T 3frx_A 79 YALSASWD-KTLRLWDVATG-----ET-------YQRFVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIKG-Q--CL 141 (319)
T ss_dssp EEEEEETT-SEEEEEETTTT-----EE-------EEEEECCSSCEEEEEECTTSC-EEEEEETTSCEEEEETTS-C--EE
T ss_pred EEEEEeCC-CEEEEEECCCC-----Ce-------eEEEccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCC-C--eE
Confidence 88888888 99999999432 11 222378999999999999999 999999999999999974 3 45
Q ss_pred eeccCCCCceeEEEEeec------CCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeecccc
Q 037120 250 ELSTGSHGTLNSIQLHAE------NQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQ 323 (489)
Q Consensus 250 ~~~~~h~~~v~~~~~~p~------~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~ 323 (489)
..+.+|...|.+++|+|. +..+++++.|+.|++||+++++....+.+|... |.+++|+|++.++++..
T Consensus 142 ~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~----v~~~~~sp~g~~l~s~~-- 215 (319)
T 3frx_A 142 ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSN----INTLTASPDGTLIASAG-- 215 (319)
T ss_dssp EEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSC----EEEEEECTTSSEEEEEE--
T ss_pred EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCc----EEEEEEcCCCCEEEEEe--
Confidence 667799999999999985 448999999999999999998888888888877 88888888877665422
Q ss_pred ceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeec
Q 037120 324 SKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSS 403 (489)
Q Consensus 324 ~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs 403 (489)
.|+. ..+++...+........ . ..+..++|+|++. ++++++
T Consensus 216 ------------------------~dg~-i~iwd~~~~~~~~~~~~------~-------~~v~~~~~sp~~~-~la~~~ 256 (319)
T 3frx_A 216 ------------------------KDGE-IMLWNLAAKKAMYTLSA------Q-------DEVFSLAFSPNRY-WLAAAT 256 (319)
T ss_dssp ------------------------TTCE-EEEEETTTTEEEEEEEC------C-------SCEEEEEECSSSS-EEEEEE
T ss_pred ------------------------CCCe-EEEEECCCCcEEEEecC------C-------CcEEEEEEcCCCC-EEEEEc
Confidence 1111 11222222211111000 0 1123356777654 444444
Q ss_pred CCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEecc
Q 037120 404 SDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQK 478 (489)
Q Consensus 404 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~~ 478 (489)
+..+++|++... ..+..+. .........|...|.+++|+|++.+|++|+.||.|+||...
T Consensus 257 -~~~i~v~~~~~~----------~~~~~~~----~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 257 -ATGIKVFSLDPQ----------YLVDDLR----PEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp -TTEEEEEEETTE----------EEEEEEC----CCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred -CCCcEEEEeCcC----------eeeeccC----ccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 456999999876 3332221 00000112567889999999999999999999999999754
No 20
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.5e-35 Score=277.06 Aligned_cols=260 Identities=11% Similarity=0.067 Sum_probs=195.6
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCC-CCCE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLA-NQDE 170 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~-~~~~ 170 (489)
+..|...|++++|+|+|++||+|+.|++|+|||+.+.... ....+.+|... |.+++|+++ ...+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~------------~~~~l~gH~~~---V~~v~~~~~~~~~~ 73 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI------------LIADLRGHEGP---VWQVAWAHPMYGNI 73 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEE------------EEEEEECCSSC---EEEEEECCGGGSSC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcE------------EEEEEcCCCcc---EEEEEeCCCCCCCE
Confidence 4567788999999999999999999999999999763211 11223567776 999999864 2358
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecC--CCcEEEEEeCCCcEEEEECCCCCcC-
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAV--NTSRLIASDTHGVVNIWDRRVGVLP- 247 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~s~dg~i~iwd~~~~~~~- 247 (489)
|++++.| ++|++||++..... ....+.+|...|++++|+|+ +. +|++++.|+.|++||++.+...
T Consensus 74 l~s~s~D-~~v~iWd~~~~~~~----------~~~~~~~h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~~ 141 (316)
T 3bg1_A 74 LASCSYD-RKVIIWREENGTWE----------KSHEHAGHDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQWE 141 (316)
T ss_dssp EEEEETT-SCEEEECCSSSCCC----------EEEEECCCSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCEE
T ss_pred EEEEECC-CEEEEEECCCCcce----------EEEEccCCCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCcc
Confidence 8899988 99999999532111 11223789999999999998 55 8999999999999999875321
Q ss_pred ceeeccCCCCceeEEEEeec-----------------CCEEEEEeCCCeEEEEEcCCC---cccceeecCCccCCCCeeE
Q 037120 248 SLELSTGSHGTLNSIQLHAE-----------------NQIIFAAGKHGSIYLWDLRGG---RTSAPFHNHKEVCHLPLTS 307 (489)
Q Consensus 248 ~~~~~~~h~~~v~~~~~~p~-----------------~~~l~~~~~dg~i~lwd~~~~---~~~~~~~~~~~~~~~~v~~ 307 (489)
....+.+|...|.+++|+|+ +.+|++|+.|++|++||++.. +.+..+.+|... |.+
T Consensus 142 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~----V~~ 217 (316)
T 3bg1_A 142 VKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDW----VRD 217 (316)
T ss_dssp ECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSC----EEE
T ss_pred eeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCc----eEE
Confidence 23455689999999999997 468999999999999999865 345667777766 777
Q ss_pred EEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCC
Q 037120 308 LKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLR 387 (489)
Q Consensus 308 l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (489)
++|+|++.. .
T Consensus 218 v~~sp~~~~-----------------------------------------------------------~----------- 227 (316)
T 3bg1_A 218 VAWAPSIGL-----------------------------------------------------------P----------- 227 (316)
T ss_dssp EECCCCSSC-----------------------------------------------------------S-----------
T ss_pred EEecCCCCC-----------------------------------------------------------C-----------
Confidence 776664310 0
Q ss_pred cceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEecc
Q 037120 388 KPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGT 467 (489)
Q Consensus 388 ~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs 467 (489)
+.++++|+.|++|+|||+....... .....+. +|.+.|.+++|+|++.+||+|+
T Consensus 228 --------~~~las~s~D~~v~iw~~~~~~~~~------~~~~~~~------------~~~~~v~~v~~sp~g~~las~~ 281 (316)
T 3bg1_A 228 --------TSTIASCSQDGRVFIWTCDDASSNT------WSPKLLH------------KFNDVVWHVSWSITANILAVSG 281 (316)
T ss_dssp --------CCEEEEEETTCEEEEEECSSTTCCC------CBCCEEE------------ECSSCEEEEEECTTTCCEEEEE
T ss_pred --------CceEEEEcCCCeEEEEEccCccccc------hhhhhhh------------cCCCcEEEEEEcCCCCEEEEEc
Confidence 3578899999999999997630000 0112233 6889999999999999999999
Q ss_pred CcceeEEEecc
Q 037120 468 KNSSLLVVSQK 478 (489)
Q Consensus 468 ~dg~i~v~~~~ 478 (489)
.||.|+||...
T Consensus 282 ~D~~v~lw~~~ 292 (316)
T 3bg1_A 282 GDNKVTLWKES 292 (316)
T ss_dssp SSSCEEEEEEC
T ss_pred CCCeEEEEEEC
Confidence 99999999764
No 21
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.2e-34 Score=282.07 Aligned_cols=298 Identities=15% Similarity=0.161 Sum_probs=200.3
Q ss_pred ccCCCceeEEEECC-CCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 93 SFGKPGISALDFDC-KGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 93 ~~~~~~V~~~~fs~-~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
.++...|+||+|+| ++++||+|+.||.|+|||+.+.... ....+.+|... |++|+|+|.+..+|
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~------------~~~~~~gH~~~---V~~l~f~p~~~~~l 180 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP------------TFIKGIGAGGS---ITGLKFNPLNTNQF 180 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC------------EEECCCSSSCC---CCEEEECSSCTTEE
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce------------eEEEccCCCCC---EEEEEEeCCCCCEE
Confidence 34566799999999 5679999999999999999873221 12223567777 99999999665699
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceee
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLEL 251 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 251 (489)
++++.| |+|++||++.. .+.... ....+...+.+++|+|++. +|++|+.||.|++||++.. .+..
T Consensus 181 ~s~s~D-~~v~iwd~~~~------~~~~~~----~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~~---~~~~ 245 (435)
T 4e54_B 181 YASSME-GTTRLQDFKGN------ILRVFA----SSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMDGK---ELWN 245 (435)
T ss_dssp EEECSS-SCEEEEETTSC------EEEEEE----CCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESSSC---BCCC
T ss_pred EEEeCC-CEEEEeeccCC------ceeEEe----ccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccCcc---eeEE
Confidence 999988 99999999421 111111 1144556788999999999 9999999999999999753 3446
Q ss_pred ccCCCCceeEEEEeecCC-EEEEEeCCCeEEEEEcCCCccccee---ecCCccCCCCeeEEEeCCCCcceeeccccceee
Q 037120 252 STGSHGTLNSIQLHAENQ-IIFAAGKHGSIYLWDLRGGRTSAPF---HNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIV 327 (489)
Q Consensus 252 ~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~lwd~~~~~~~~~~---~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~ 327 (489)
+.+|...|++++|+|+++ ++++++.|++|++||+++++....+ .+|... |++++|+|+|.+++
T Consensus 246 ~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~----v~~~~~spdg~~l~--------- 312 (435)
T 4e54_B 246 LRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHP----VNAACFSPDGARLL--------- 312 (435)
T ss_dssp SBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSC----EEECCBCTTSSEEE---------
T ss_pred EecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeecccc----ccceeECCCCCeeE---------
Confidence 679999999999999987 5667788999999999987653333 345544 77776666665554
Q ss_pred ccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcE----------
Q 037120 328 SQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSI---------- 397 (489)
Q Consensus 328 ~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 397 (489)
+++.|+. ..+++...+............. ..........|.+.+..
T Consensus 313 -----------------s~~~D~~-i~iwd~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~d~~ 368 (435)
T 4e54_B 313 -----------------TTDQKSE-IRVYSASQWDCPLGLIPHPHRH------FQHLTPIKAAWHPRYNLIVVGRYPDPN 368 (435)
T ss_dssp -----------------EEESSSC-EEEEESSSSSSEEEECCCCCCC------CSSSCCCBCEECSSSSCEEEECCCCTT
T ss_pred -----------------EEcCCCE-EEEEECCCCccceEEecccccc------cccceeEEEEEcCCCCEEEEEEcCCCC
Confidence 3333322 1122222221111000000000 00000112234444333
Q ss_pred -EEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEE-EeeCCCCeEEeccCcceeEEE
Q 037120 398 -YAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTAC-VTHPLNNTIVAGTKNSSLLVV 475 (489)
Q Consensus 398 -~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v-a~~p~~~~i~sgs~dg~i~v~ 475 (489)
+++++..++.|++||..++ +.+..+. .+|...|.++ +|||++.+||+|+ |+.|+||
T Consensus 369 ~~~~~~~~~~~i~iwd~~~g----------~~~~~l~-----------~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW 426 (435)
T 4e54_B 369 FKSCTPYELRTIDVFDGNSG----------KMMCQLY-----------DPESSGISSLNEFNPMGDTLASAM-GYHILIW 426 (435)
T ss_dssp SCCSSTTCCCCEEEECSSSC----------CEEEEEC-----------CSSCCCCCCEEEECTTSSCEEEEC-SSEEEEC
T ss_pred eEEEEecCCCEEEEEECCCC----------cEEEEEe-----------CCCCCcEEEEEEECCCCCEEEEEc-CCcEEEE
Confidence 3344445678999999988 6655432 1688889887 6999999999887 7899999
Q ss_pred eccc
Q 037120 476 SQKQ 479 (489)
Q Consensus 476 ~~~~ 479 (489)
..+.
T Consensus 427 ~~~~ 430 (435)
T 4e54_B 427 SQQE 430 (435)
T ss_dssp CCC-
T ss_pred ECCc
Confidence 8664
No 22
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-34 Score=283.02 Aligned_cols=341 Identities=13% Similarity=0.114 Sum_probs=234.9
Q ss_pred CceeEEEECCCCc-EEEEE----------ecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeC
Q 037120 97 PGISALDFDCKGI-YLVSA----------TRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNL 165 (489)
Q Consensus 97 ~~V~~~~fs~~g~-~la~g----------~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~ 165 (489)
..|.+++|+|+|+ +||+| +.||.|+|||+.+...... .....|... |.+++|+|
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~------------~~~~~~~~~---v~~~~~s~ 77 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKP------------IASLQVDSK---FNDLDWSH 77 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSC------------SCCCCCSSC---EEEEEECS
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcE------------EEEEecCCc---eEEEEECC
Confidence 3588999999997 99999 8899999999988442211 001224444 99999999
Q ss_pred CCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCC
Q 037120 166 ANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGV 245 (489)
Q Consensus 166 ~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~ 245 (489)
++. +|++++.| |.|++||+....... .....+.+|...|++++|+|++..+|++++.|+.|++||+++++
T Consensus 78 ~~~-~l~~~~~d-g~v~vw~~~~~~~~~--------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 147 (416)
T 2pm9_A 78 NNK-IIAGALDN-GSLELYSTNEANNAI--------NSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCT 147 (416)
T ss_dssp SSS-CEEEEESS-SCEEEECCSSTTSCC--------CEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTS
T ss_pred CCC-eEEEEccC-CeEEEeecccccccc--------cchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCc
Confidence 986 77778777 999999995421110 12233478999999999999943399999999999999999875
Q ss_pred ------cC-ceeeccCCCCceeEEEEeec-CCEEEEEeCCCeEEEEEcCCCcccceeecC------CccCCCCeeEEEeC
Q 037120 246 ------LP-SLELSTGSHGTLNSIQLHAE-NQIIFAAGKHGSIYLWDLRGGRTSAPFHNH------KEVCHLPLTSLKLA 311 (489)
Q Consensus 246 ------~~-~~~~~~~h~~~v~~~~~~p~-~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~------~~~~~~~v~~l~~~ 311 (489)
.. .......|...|.+++|+|+ +.++++++.||.|++||+++++.+..+..+ ... |.+++|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~----v~~~~~~ 223 (416)
T 2pm9_A 148 ESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQ----LSVVEWH 223 (416)
T ss_dssp SCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCC----EEEEEEC
T ss_pred cccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCc----eEEEEEC
Confidence 22 22234578999999999999 788899999999999999999888777765 444 9999999
Q ss_pred CCCc-ceeecc--------------------ccce-eeccceeEEEeCC-CCCeEEEEEecCCceEEEEeeccceeeecC
Q 037120 312 SMLE-KIGTLK--------------------AQSK-IVSQEIHSIDLDP-SCSYQLAFHLDDGWSGVLDVYNSRVSHVHC 368 (489)
Q Consensus 312 ~~~~-~i~~~~--------------------~~~~-~~~~~i~~~~~~p-~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 368 (489)
|++. .+++.. .... .+...|.++.|+| ++.++++++.++. ..+++...+.......
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~-v~~wd~~~~~~~~~~~ 302 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNT-VLLWNPESAEQLSQFP 302 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSE-EEEECSSSCCEEEEEE
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCC-EEEeeCCCCccceeec
Confidence 9984 442211 1112 3567899999999 7777777766554 2344444333222111
Q ss_pred CCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeec--cCccc-ch--hhHhh---hhcc
Q 037120 369 PPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVD--YNEDI-ES--LSERT---KLKK 440 (489)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~--~~~~~-~~--~~~~~---~~~~ 440 (489)
. ....+..++|+|++..++++++.|+.|+|||+........... ..... .. +.... ....
T Consensus 303 ~------------~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (416)
T 2pm9_A 303 A------------RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEK 370 (416)
T ss_dssp C------------SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSC
T ss_pred C------------CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccc
Confidence 1 0012345788888878999999999999999987721110000 00000 00 00000 0000
Q ss_pred -----cCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEeccc
Q 037120 441 -----ENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQKQ 479 (489)
Q Consensus 441 -----~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~~~ 479 (489)
......|...|.+++|+|++.+|++|+.||.|.||....
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 371 PSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp CCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred cccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 001113778899999999999999999999999997653
No 23
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.2e-33 Score=272.19 Aligned_cols=295 Identities=12% Similarity=0.150 Sum_probs=206.4
Q ss_pred cccCCCceeEEEECCCC-cEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 92 RSFGKPGISALDFDCKG-IYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g-~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
+..+...|.+++|+|+| ++||+|+.||.|+|||+.+..... .....+|... |.+++|+|++...
T Consensus 69 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~------------~~~~~~h~~~---v~~~~~~~~~~~~ 133 (383)
T 3ei3_B 69 ASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTS------------FIQGMGPGDA---ITGMKFNQFNTNQ 133 (383)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEE------------EECCCSTTCB---EEEEEEETTEEEE
T ss_pred ccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccce------------eeecCCcCCc---eeEEEeCCCCCCE
Confidence 45567889999999999 999999999999999998743332 1111345555 9999999955568
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCcee
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLE 250 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 250 (489)
|++++.| +.|++||+.. ..+.... ...+|...|.+++|+|++. +|++++.|+.|++||++ ++ .+.
T Consensus 134 l~s~~~d-~~i~iwd~~~------~~~~~~~----~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~-~~--~~~ 198 (383)
T 3ei3_B 134 LFVSSIR-GATTLRDFSG------SVIQVFA----KTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLD-GH--EIF 198 (383)
T ss_dssp EEEEETT-TEEEEEETTS------CEEEEEE----CCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETT-SC--EEE
T ss_pred EEEEeCC-CEEEEEECCC------CceEEEe----ccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECC-CC--EEE
Confidence 8888888 9999999942 1111111 1245668999999999999 99999999999999995 33 556
Q ss_pred eccCCCCceeEEEEeecCC-EEEEEeCCCeEEEEEcCCC----cccceeecCCccCCCCeeEEEeCC-CCcceeeccccc
Q 037120 251 LSTGSHGTLNSIQLHAENQ-IIFAAGKHGSIYLWDLRGG----RTSAPFHNHKEVCHLPLTSLKLAS-MLEKIGTLKAQS 324 (489)
Q Consensus 251 ~~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~lwd~~~~----~~~~~~~~~~~~~~~~v~~l~~~~-~~~~i~~~~~~~ 324 (489)
.+..|...|.+++|+|+++ ++++++.|+.|++||++++ ..+..+ .|... |++++|+| ++..+++
T Consensus 199 ~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~----v~~~~~s~~~~~~l~~----- 268 (383)
T 3ei3_B 199 KEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKP----VNAAYFNPTDSTKLLT----- 268 (383)
T ss_dssp EEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSC----EEEEEECTTTSCEEEE-----
T ss_pred EeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCc----eEEEEEcCCCCCEEEE-----
Confidence 6778999999999999999 8999999999999999984 334444 45555 77777777 6665543
Q ss_pred eeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeee------------cCCCCCCcCCCCccccccCCCcceee
Q 037120 325 KIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHV------------HCPPPAWLSDSNNSADQLHLRKPSWL 392 (489)
Q Consensus 325 ~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (489)
++.++. ..+++...+..... ..+...|.+.. ..-..+|+
T Consensus 269 ---------------------~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~~s 319 (383)
T 3ei3_B 269 ---------------------TDQRNE-IRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMY-------DLIVAGRY 319 (383)
T ss_dssp ---------------------EESSSE-EEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSS-------SEEEEECB
T ss_pred ---------------------EcCCCc-EEEEECCCCccccccccccccccccccceEEeccCCC-------CceEEEec
Confidence 222111 11222221111000 00001111110 01113344
Q ss_pred cCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCccee
Q 037120 393 STNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSL 472 (489)
Q Consensus 393 ~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i 472 (489)
|++.. +|+.|+.|+|||+.++ +.+..+... .|.+.+.+++|+|++.+|++|+ ||.|
T Consensus 320 ~dg~~---s~s~d~~i~iwd~~~~----------~~~~~l~~~----------~~~~~~~~~~~s~~g~~l~s~s-d~~i 375 (383)
T 3ei3_B 320 PDDQL---LLNDKRTIDIYDANSG----------GLVHQLRDP----------NAAGIISLNKFSPTGDVLASGM-GFNI 375 (383)
T ss_dssp CCTTT---CTTCCCCEEEEETTTC----------CEEEEECBT----------TBCSCCCEEEECTTSSEEEEEE-TTEE
T ss_pred CCccc---ccCCCCeEEEEecCCC----------ceeeeecCC----------CCCceEEEEEEecCccEEEEec-CCcE
Confidence 44433 6789999999999988 777666510 2567788889999999999997 9999
Q ss_pred EEEeccc
Q 037120 473 LVVSQKQ 479 (489)
Q Consensus 473 ~v~~~~~ 479 (489)
.||..+.
T Consensus 376 ~iw~~~~ 382 (383)
T 3ei3_B 376 LIWNRED 382 (383)
T ss_dssp EEEECC-
T ss_pred EEEecCC
Confidence 9998654
No 24
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-33 Score=278.71 Aligned_cols=327 Identities=11% Similarity=0.114 Sum_probs=210.9
Q ss_pred ccCCCceeEEEECC-CCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 93 SFGKPGISALDFDC-KGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 93 ~~~~~~V~~~~fs~-~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
..|...|++++|+| ++++||+|+.||+|+|||+.+...... ...... ..|... |.+++|+|++. .|
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~--------~~~~~~-~~h~~~---v~~~~~~~~~~-~l 126 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEV--------YSSSLT-YDCSST---VTQITMIPNFD-AF 126 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCC--------CSCSEE-EECSSC---EEEEEECTTSS-EE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcc--------cceeee-ccCCCC---EEEEEEeCCCC-EE
Confidence 44667899999999 999999999999999999876211110 000111 135555 99999999875 88
Q ss_pred EEEecCCCEEEEEEeccCC-CCCceeeeeceeeeeecCC--cccCeeEEE--EecCCCcEEEEEeCCCcEEEEECCCCCc
Q 037120 172 ACASTRSNVVSIYDIGYIS-DEPVEVLKTRRSVTVVGSD--VQKGLSDLA--FSAVNTSRLIASDTHGVVNIWDRRVGVL 246 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~--h~~~v~~~~--~~~~~~~~l~s~s~dg~i~iwd~~~~~~ 246 (489)
++++.| |+|++||+.... ................+.. +...+.++. +++++. +|++++.|+.|++||+++++
T Consensus 127 ~s~s~d-g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~- 203 (437)
T 3gre_A 127 AVSSKD-GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS-LLVALTNLSRVIIFDIRTLE- 203 (437)
T ss_dssp EEEETT-SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE-EEEEEETTSEEEEEETTTCC-
T ss_pred EEEeCC-CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCe-
Confidence 888888 999999994211 1111111111111111222 667788888 557787 99999999999999999877
Q ss_pred CceeeccC--CCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceee-cCCccCCCCeeEEEeCCCCcceeecccc
Q 037120 247 PSLELSTG--SHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFH-NHKEVCHLPLTSLKLASMLEKIGTLKAQ 323 (489)
Q Consensus 247 ~~~~~~~~--h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~-~~~~~~~~~v~~l~~~~~~~~i~~~~~~ 323 (489)
++..+.. |...|++++|+|++.++++|+.||.|++||+++++.+..+. .|... |++++|+|.
T Consensus 204 -~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~----v~~~~~~~~---------- 268 (437)
T 3gre_A 204 -RLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAP----ITHVEVCQF---------- 268 (437)
T ss_dssp -EEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEE----EEEEEECTT----------
T ss_pred -eeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCc----eEEEEeccc----------
Confidence 5656666 88999999999999999999999999999999988888776 56655 999977653
Q ss_pred ceeeccceeEEEeCCCCCeEEEEEecCC---ce----EEEEeeccceeeecCCCCCCcCCCC--------ccccccCCCc
Q 037120 324 SKIVSQEIHSIDLDPSCSYQLAFHLDDG---WS----GVLDVYNSRVSHVHCPPPAWLSDSN--------NSADQLHLRK 388 (489)
Q Consensus 324 ~~~~~~~i~~~~~~p~~~~~~~~~~~~~---w~----~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 388 (489)
|+|++.++++++.++. |. ..+..+.++...+... .|.+... .......+..
T Consensus 269 ------------~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~v~~ 334 (437)
T 3gre_A 269 ------------YGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSME--HFLPIEKGLEELNFCGIRSLNALST 334 (437)
T ss_dssp ------------TCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGG--GGSCBCSSGGGCCCCCCCSGGGGCC
T ss_pred ------------cCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccc--eecccccccccceecccccCCceEE
Confidence 1222323332222221 10 1222222222111111 1221110 0001123455
Q ss_pred ceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHh-------------------------hhhcccCC
Q 037120 389 PSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSER-------------------------TKLKKENR 443 (489)
Q Consensus 389 ~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~ 443 (489)
++|. ++.++++|+.|+.|++||+.++ +....+... ........
T Consensus 335 l~~~--~~~~l~s~~~d~~i~~wd~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (437)
T 3gre_A 335 ISVS--NDKILLTDEATSSIVMFSLNEL----------SSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDD 402 (437)
T ss_dssp EEEE--TTEEEEEEGGGTEEEEEETTCG----------GGCEEEECC--CCCEEEEEEEETTEEEEEEECC---------
T ss_pred EEEC--CceEEEecCCCCeEEEEECCCc----------ccceEEecccccCceEEEEEeecceEEEEEecccccccccCc
Confidence 6777 3589999999999999999887 222221100 00000111
Q ss_pred cccCCCceEEEEeeCC--CCeEEeccCcceeEEEe
Q 037120 444 FVPLSEGVTACVTHPL--NNTIVAGTKNSSLLVVS 476 (489)
Q Consensus 444 ~~~h~~~V~~va~~p~--~~~i~sgs~dg~i~v~~ 476 (489)
+..|.+.|++++|+++ +.+|++|+.||.|.||.
T Consensus 403 ~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 403 SLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ----CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 2359999999999998 77999999999999994
No 25
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.5e-34 Score=278.30 Aligned_cols=327 Identities=9% Similarity=0.028 Sum_probs=226.4
Q ss_pred CCCceeEEEECCCCc-EEEEEecCCeEEEEeC----CCccc------ccCCCCCCCCCcccccccccCCCCCCceeEEEe
Q 037120 95 GKPGISALDFDCKGI-YLVSATRSGCLTVHDF----ESLYY------QCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRW 163 (489)
Q Consensus 95 ~~~~V~~~~fs~~g~-~la~g~~dg~i~vwd~----~~~~~------~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~ 163 (489)
+...|.+++|+|+|+ +||+|+.||.|+|||+ .+... ..... .....+....+|... |++++|
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~---v~~~~~ 116 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELR----HPFALSASSGKTTNQ---VTCLAW 116 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEE----CCCCCC------CBC---EEEEEE
T ss_pred ccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccc----ccccccccccCCCCc---eEEEEE
Confidence 446799999999999 9999999999999999 66441 11000 001111111224444 999999
Q ss_pred eCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCC
Q 037120 164 NLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRV 243 (489)
Q Consensus 164 ~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~ 243 (489)
+|++. +|++++.| |.|++||.. + . ....+.+|...|.+++|+|++. +|++++.|+.|++||+++
T Consensus 117 s~~~~-~l~~~~~d-g~i~i~~~~-~-----~-------~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~ 180 (425)
T 1r5m_A 117 SHDGN-SIVTGVEN-GELRLWNKT-G-----A-------LLNVLNFHRAPIVSVKWNKDGT-HIISMDVENVTILWNVIS 180 (425)
T ss_dssp CTTSS-EEEEEETT-SCEEEEETT-S-----C-------EEEEECCCCSCEEEEEECTTSS-EEEEEETTCCEEEEETTT
T ss_pred cCCCC-EEEEEeCC-CeEEEEeCC-C-----C-------eeeeccCCCccEEEEEECCCCC-EEEEEecCCeEEEEECCC
Confidence 99985 78888877 999999941 1 1 1122367999999999999999 999999999999999998
Q ss_pred CCcCceeeccCCCCc---------------eeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEE
Q 037120 244 GVLPSLELSTGSHGT---------------LNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSL 308 (489)
Q Consensus 244 ~~~~~~~~~~~h~~~---------------v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l 308 (489)
++ .+..+..+... +.+++|+|++ .+++++.||.|++||+++++.+..+..|... |.++
T Consensus 181 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~----i~~~ 253 (425)
T 1r5m_A 181 GT--VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGP----ISVL 253 (425)
T ss_dssp TE--EEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSC----EEEE
T ss_pred Cc--EEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCc----eEEE
Confidence 76 45555555555 9999999985 5788889999999999999888888888877 9999
Q ss_pred EeCCCCcceeecc----------------ccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCC
Q 037120 309 KLASMLEKIGTLK----------------AQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPA 372 (489)
Q Consensus 309 ~~~~~~~~i~~~~----------------~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~ 372 (489)
+|+|++..+++.. .....+...|..+.|+|++ .+++++.++ ...+++...+........
T Consensus 254 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~-~i~i~d~~~~~~~~~~~~--- 328 (425)
T 1r5m_A 254 EFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDG-SVRLWSLKQNTLLALSIV--- 328 (425)
T ss_dssp EEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTS-EEEEEETTTTEEEEEEEC---
T ss_pred EECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCC-cEEEEECCCCcEeEeccc---
Confidence 9999998774321 1112346689999999999 666555444 334455444333222111
Q ss_pred CcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeec----------cCcccchhhHhhhhcccC
Q 037120 373 WLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVD----------YNEDIESLSERTKLKKEN 442 (489)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 442 (489)
. ...+..++|+|++ .++++|+.|+.|++||+.+......... ..+.+..+.
T Consensus 329 ---~------~~~i~~~~~s~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 389 (425)
T 1r5m_A 329 ---D------GVPIFAGRISQDG-QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQ--------- 389 (425)
T ss_dssp ---T------TCCEEEEEECTTS-SEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEEC---------
T ss_pred ---C------CccEEEEEEcCCC-CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhc---------
Confidence 0 0123345677764 5677788999999999987610000000 000233333
Q ss_pred CcccCCC--ceEEEEeeCCCCeEEeccCcceeEEEecc
Q 037120 443 RFVPLSE--GVTACVTHPLNNTIVAGTKNSSLLVVSQK 478 (489)
Q Consensus 443 ~~~~h~~--~V~~va~~p~~~~i~sgs~dg~i~v~~~~ 478 (489)
+|.. .|++++|+|++.+|++|+.||.|.||.-+
T Consensus 390 ---~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 390 ---SSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ---CTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred ---CcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 7866 99999999999999999999999999754
No 26
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.3e-33 Score=268.26 Aligned_cols=311 Identities=15% Similarity=0.154 Sum_probs=233.2
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
..|.+++|+|+|++++++..++.+.+|+...... ......|... |++++|+|++. ++++++
T Consensus 10 ~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~h~~~---v~~~~~~~~~~-~l~~~~- 70 (337)
T 1gxr_A 10 KPAYSFHVTADGQMQPVPFPPDALIGPGIPRHAR--------------QINTLNHGEV---VCAVTISNPTR-HVYTGG- 70 (337)
T ss_dssp EECCEEEECSSSCEEECCCCTTSSSSTTCCSEEE--------------EEEEECCSSC---CCEEEECSSSS-EEEEEC-
T ss_pred CceeEEEECCCCCEEEeecCCCcEeccccCCccc--------------cceeccCCCc---eEEEEEecCCc-EEEEcC-
Confidence 4589999999999999998877766665443111 1112346555 99999999986 777777
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCC
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSH 256 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~ 256 (489)
| |.|++||+...... .. ... ....+|...|.+++|+|+++ +|++++.|+.|++||+++++......+..|.
T Consensus 71 d-g~i~iw~~~~~~~~--~~---~~~--~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~ 141 (337)
T 1gxr_A 71 K-GCVKVWDISHPGNK--SP---VSQ--LDCLNRDNYIRSCKLLPDGC-TLIVGGEASTLSIWDLAAPTPRIKAELTSSA 141 (337)
T ss_dssp B-SEEEEEETTSTTCC--SC---SEE--EECSCTTSBEEEEEECTTSS-EEEEEESSSEEEEEECCCC--EEEEEEECSS
T ss_pred C-CeEEEEECCCCCce--ee---eec--ccccCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCCcceeeecccCC
Confidence 6 99999999543221 11 111 11247889999999999998 9999999999999999987644455566889
Q ss_pred CceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeecccc-------------
Q 037120 257 GTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQ------------- 323 (489)
Q Consensus 257 ~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~------------- 323 (489)
..|.+++|+|+++++++++.||.|++||+++++.+..+..|... |.+++|+|++..+.+....
T Consensus 142 ~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~----i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 217 (337)
T 1gxr_A 142 PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDG----ASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ 217 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCc----eEEEEECCCCCEEEEEecCCcEEEEECCCCce
Confidence 99999999999999999999999999999999988899888877 9999999999877432111
Q ss_pred --ceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEe
Q 037120 324 --SKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVG 401 (489)
Q Consensus 324 --~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 401 (489)
...+...+..+.|+|++.++++.+.++. ..+++...+........ ...+..+.|+|++. ++++
T Consensus 218 ~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~-i~~~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~-~l~~ 282 (337)
T 1gxr_A 218 LQQHDFTSQIFSLGYCPTGEWLAVGMESSN-VEVLHVNKPDKYQLHLH-------------ESCVLSLKFAYCGK-WFVS 282 (337)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSC-EEEEETTSSCEEEECCC-------------SSCEEEEEECTTSS-EEEE
T ss_pred EeeecCCCceEEEEECCCCCEEEEEcCCCc-EEEEECCCCCeEEEcCC-------------ccceeEEEECCCCC-EEEE
Confidence 1123567899999999998888776554 23444433332221110 02234567777655 6778
Q ss_pred ecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEec
Q 037120 402 SSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQ 477 (489)
Q Consensus 402 gs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~ 477 (489)
++.|+.|++||+.++ +.+.. . .|...|++++|+|++..|++++.||.|.+|.-
T Consensus 283 ~~~dg~i~~~~~~~~----------~~~~~-~------------~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 283 TGKDNLLNAWRTPYG----------ASIFQ-S------------KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EETTSEEEEEETTTC----------CEEEE-E------------ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred ecCCCcEEEEECCCC----------eEEEE-e------------cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 889999999999988 55432 2 58899999999999999999999999999963
No 27
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.2e-33 Score=264.60 Aligned_cols=302 Identities=11% Similarity=0.072 Sum_probs=211.8
Q ss_pred ccccCCCceeEEEECCC-CcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCC
Q 037120 91 RRSFGKPGISALDFDCK-GIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQD 169 (489)
Q Consensus 91 ~~~~~~~~V~~~~fs~~-g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~ 169 (489)
++..|...|++|+|+|+ +++||+|+.||+|+|||+.+..... ..+...+.+|... |.+++|+|++.
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~---------~~~~~~l~~h~~~---V~~~~~s~dg~- 99 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNY---------GIPQRALRGHSHF---VSDVVISSDGQ- 99 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCS---------EEEEEEECCCSSC---EEEEEECTTSS-
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc---------ceeeEEEeCCCCC---EEEEEECCCCC-
Confidence 46778888999999998 6899999999999999998733221 1122234567766 99999999986
Q ss_pred EEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCce
Q 037120 170 EVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSL 249 (489)
Q Consensus 170 ~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 249 (489)
+|++++.| +.|++|+.... ... . ....+...+..+.+++++. .|++++.|+.+++||+...... .
T Consensus 100 ~l~s~~~d-~~i~~~~~~~~-----~~~---~----~~~~~~~~~~~~~~~~~~~-~l~s~s~d~~~~~~d~~~~~~~-~ 164 (340)
T 4aow_A 100 FALSGSWD-GTLRLWDLTTG-----TTT---R----RFVGHTKDVLSVAFSSDNR-QIVSGSRDKTIKLWNTLGVCKY-T 164 (340)
T ss_dssp EEEEEETT-SEEEEEETTTT-----EEE---E----EEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEE-E
T ss_pred EEEEEccc-ccceEEeeccc-----cee---e----eecCCCCceeEEEEeecCc-cceeecCCCeEEEEEeCCCceE-E
Confidence 78888888 99999999322 111 1 1144667888999999998 9999999999999999865422 3
Q ss_pred eeccCCCCceeEEEEeecC--CEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceee
Q 037120 250 ELSTGSHGTLNSIQLHAEN--QIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIV 327 (489)
Q Consensus 250 ~~~~~h~~~v~~~~~~p~~--~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~ 327 (489)
....+|...+.+++|++++ .++++++.|+.|++||+++++.+..+.+|... |++++|+|++.++++......
T Consensus 165 ~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~----v~~~~~s~~~~~l~s~s~Dg~-- 238 (340)
T 4aow_A 165 VQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY----LNTVTVSPDGSLCASGGKDGQ-- 238 (340)
T ss_dssp ECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTSSEEEEEETTCE--
T ss_pred EEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCc----EEEEEECCCCCEEEEEeCCCe--
Confidence 3455889999999998865 46788888999999999999988888888877 999998888877654221111
Q ss_pred ccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCc
Q 037120 328 SQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHG 407 (489)
Q Consensus 328 ~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~ 407 (489)
+ .+++............ . ..+..++|.|++ ++++++.|+.
T Consensus 239 ---------------i----------~iwd~~~~~~~~~~~~------~-------~~v~~~~~~~~~--~~~~~~~d~~ 278 (340)
T 4aow_A 239 ---------------A----------MLWDLNEGKHLYTLDG------G-------DIINALCFSPNR--YWLCAATGPS 278 (340)
T ss_dssp ---------------E----------EEEETTTTEEEEEEEC------S-------SCEEEEEECSSS--SEEEEEETTE
T ss_pred ---------------E----------EEEEeccCceeeeecC------C-------ceEEeeecCCCC--ceeeccCCCE
Confidence 1 1111111111110000 0 001223444443 3445668999
Q ss_pred EEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEeccc
Q 037120 408 IHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQKQ 479 (489)
Q Consensus 408 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~~~ 479 (489)
|+|||+... ..+..+.. ........+|...|++++|+|++++|++|+.||.|+||.-+.
T Consensus 279 i~iwd~~~~----------~~~~~~~~---~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 279 IKIWDLEGK----------IIVDELKQ---EVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp EEEEETTTT----------EEEEEECC---C-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred EEEEECCCC----------eEEEeccc---cceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 999999876 33332220 000011237999999999999999999999999999997553
No 28
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.4e-33 Score=288.66 Aligned_cols=304 Identities=13% Similarity=0.105 Sum_probs=211.3
Q ss_pred cccCCCceeEEEECCCC-cEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 92 RSFGKPGISALDFDCKG-IYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g-~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
+..|...|++++|+|++ ++|++|+.||+|+|||+....... ......+.+|... |.+++|+|++. +
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~---------~~~~~~~~~h~~~---v~~v~~s~~g~-~ 444 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY---------GVAQRRLTGHSHF---VEDVVLSSDGQ-F 444 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS---------CEEEEEEECCSSC---EEEEEECTTSS-E
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc---------ccccceecCCCCc---EEEEEECCCCC-E
Confidence 56788889999999875 799999999999999997632111 1112234567777 99999999985 8
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcC-ce
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLP-SL 249 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~ 249 (489)
|++++.| |+|+|||+... .. ...+.+|...|.+++|+|++. +|++++.|++|++||+...... ..
T Consensus 445 l~sgs~D-g~v~vwd~~~~-----~~-------~~~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~ 510 (694)
T 3dm0_A 445 ALSGSWD-GELRLWDLAAG-----VS-------TRRFVGHTKDVLSVAFSLDNR-QIVSASRDRTIKLWNTLGECKYTIS 510 (694)
T ss_dssp EEEEETT-SEEEEEETTTT-----EE-------EEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEEC
T ss_pred EEEEeCC-CcEEEEECCCC-----cc-------eeEEeCCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEECCCCcceeec
Confidence 8888888 99999999432 11 122378999999999999999 9999999999999998754311 11
Q ss_pred eeccCCCCceeEEEEeecC--CEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceee
Q 037120 250 ELSTGSHGTLNSIQLHAEN--QIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIV 327 (489)
Q Consensus 250 ~~~~~h~~~v~~~~~~p~~--~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~ 327 (489)
....+|...|.+++|+|++ ..+++++.|++|++||+++++....+.+|... |++++|+|++..+++
T Consensus 511 ~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~----v~~v~~spdg~~l~s-------- 578 (694)
T 3dm0_A 511 EGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGY----VSTVAVSPDGSLCAS-------- 578 (694)
T ss_dssp SSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSC----EEEEEECTTSSEEEE--------
T ss_pred cCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCC----EEEEEEeCCCCEEEE--------
Confidence 1224788999999999987 57999999999999999999888888888877 888888887766654
Q ss_pred ccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCc
Q 037120 328 SQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHG 407 (489)
Q Consensus 328 ~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~ 407 (489)
++.|+. ..++++..+....... .. ..+..++|+|++. +++++ .|+.
T Consensus 579 ------------------g~~Dg~-i~iwd~~~~~~~~~~~------~~-------~~v~~~~~sp~~~-~l~~~-~~~~ 624 (694)
T 3dm0_A 579 ------------------GGKDGV-VLLWDLAEGKKLYSLE------AN-------SVIHALCFSPNRY-WLCAA-TEHG 624 (694)
T ss_dssp ------------------EETTSB-CEEEETTTTEEEECCB------CS-------SCEEEEEECSSSS-EEEEE-ETTE
T ss_pred ------------------EeCCCe-EEEEECCCCceEEEec------CC-------CcEEEEEEcCCCc-EEEEE-cCCC
Confidence 222211 1233333332211100 00 1123456777644 44444 5677
Q ss_pred EEEEeccCCCCCCeeeccCcccchhhHhhhh-------cccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEecc
Q 037120 408 IHLLDFFPGSSSPSHVDYNEDIESLSERTKL-------KKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQK 478 (489)
Q Consensus 408 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~~ 478 (489)
|+|||+.++ +.+..+...... ........+...|++++|+|++.+|++|+.||.|+||.-.
T Consensus 625 i~iwd~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 625 IKIWDLESK----------SIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEEETTTT----------EEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEEECCCC----------CChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 999999887 443332200000 0000001233358999999999999999999999999754
No 29
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-32 Score=260.30 Aligned_cols=290 Identities=11% Similarity=0.109 Sum_probs=214.0
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
+..|...|++++|+|+|++||+|+.||.|+|||+.+..... .+.+|... |.+++|+|++. .|
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~--------------~~~~h~~~---v~~~~~~~~~~-~l 89 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLG--------------TLDGHTGT---IWSIDVDCFTK-YC 89 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEE--------------EECCCSSC---EEEEEECTTSS-EE
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhh--------------hhhhcCCc---EEEEEEcCCCC-EE
Confidence 55677889999999999999999999999999998744433 22445555 99999999875 77
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCC-----CcEEEEECCCCCc
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTH-----GVVNIWDRRVGVL 246 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~d-----g~i~iwd~~~~~~ 246 (489)
++++.| |.|++||+... ..+. .+ . |...|.+++|+|++. .|++++.+ +.|++||++....
T Consensus 90 ~s~~~d-g~i~iwd~~~~-----~~~~---~~----~-~~~~v~~~~~~~~~~-~l~~~~~~~~~~~g~i~~~d~~~~~~ 154 (369)
T 3zwl_B 90 VTGSAD-YSIKLWDVSNG-----QCVA---TW----K-SPVPVKRVEFSPCGN-YFLAILDNVMKNPGSINIYEIERDSA 154 (369)
T ss_dssp EEEETT-TEEEEEETTTC-----CEEE---EE----E-CSSCEEEEEECTTSS-EEEEEECCBTTBCCEEEEEEEEECTT
T ss_pred EEEeCC-CeEEEEECCCC-----cEEE---Ee----e-cCCCeEEEEEccCCC-EEEEecCCccCCCCEEEEEEecCCcc
Confidence 888887 99999999432 1111 11 2 667999999999999 99999988 9999999987642
Q ss_pred C---------ceeeccCCCC--ceeEEEEeecCCEEEEEeCCCeEEEEEcCC-CcccceeecCCccCCCCeeEEEeCCCC
Q 037120 247 P---------SLELSTGSHG--TLNSIQLHAENQIIFAAGKHGSIYLWDLRG-GRTSAPFHNHKEVCHLPLTSLKLASML 314 (489)
Q Consensus 247 ~---------~~~~~~~h~~--~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~-~~~~~~~~~~~~~~~~~v~~l~~~~~~ 314 (489)
. .......|.. .+.+++|+|+++++++++.||.|++||+++ ++.+..+..|... |.+++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~----v~~~~~~~~~ 230 (369)
T 3zwl_B 155 THELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKS----ISDMQFSPDL 230 (369)
T ss_dssp TCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSC----EEEEEECTTS
T ss_pred ceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCc----eeEEEECCCC
Confidence 1 1223335555 899999999999999999999999999998 6668888888766 8888888888
Q ss_pred cceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecC
Q 037120 315 EKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLST 394 (489)
Q Consensus 315 ~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (489)
..+++..... .+ .+++...+........ . .....++|.|+
T Consensus 231 ~~l~~~~~d~-----------------~i----------~v~d~~~~~~~~~~~~------~-------~~~~~~~~~~~ 270 (369)
T 3zwl_B 231 TYFITSSRDT-----------------NS----------FLVDVSTLQVLKKYET------D-------CPLNTAVITPL 270 (369)
T ss_dssp SEEEEEETTS-----------------EE----------EEEETTTCCEEEEEEC------S-------SCEEEEEECSS
T ss_pred CEEEEecCCc-----------------eE----------EEEECCCCceeeeecC------C-------CCceeEEecCC
Confidence 7665421111 11 1122221111111000 0 11223455565
Q ss_pred CcEEEEeecCCC--------------cEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCC
Q 037120 395 NSIYAVGSSSDH--------------GIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLN 460 (489)
Q Consensus 395 ~~~~l~sgs~d~--------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~ 460 (489)
+..+++ ++.++ .+++||+.++ +.+..+. +|.+.|++++|+|++
T Consensus 271 ~~~l~~-~~~~~~~~~~~~~~~~~~~~i~~~d~~~~----------~~~~~~~------------~~~~~v~~~~~s~~~ 327 (369)
T 3zwl_B 271 KEFIIL-GGGQEAKDVTTTSANEGKFEARFYHKIFE----------EEIGRVQ------------GHFGPLNTVAISPQG 327 (369)
T ss_dssp SSEEEE-EECCC-------------CEEEEEETTTC----------CEEEEEE------------CCSSCEEEEEECTTS
T ss_pred CceEEE-eecCCCceEEEEecCCCcceeEEEecCCC----------cchhhee------------cccCcEEEEEECCCC
Confidence 554444 44454 8999999988 7777777 899999999999999
Q ss_pred CeEEeccCcceeEEEeccccc
Q 037120 461 NTIVAGTKNSSLLVVSQKQQC 481 (489)
Q Consensus 461 ~~i~sgs~dg~i~v~~~~~~~ 481 (489)
.+|++|+.||.|.||..+...
T Consensus 328 ~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 328 TSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp SEEEEEETTSEEEEEEECHHH
T ss_pred CEEEEEcCCCeEEEEECcccc
Confidence 999999999999999877643
No 30
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.4e-33 Score=274.15 Aligned_cols=306 Identities=14% Similarity=0.113 Sum_probs=230.9
Q ss_pred ceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecC
Q 037120 98 GISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTR 177 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d 177 (489)
.+++++|+|+|++|++|+.||.|++||+.+...... .. .| . .+....|++++. +|++++.|
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~--------~~------~~--~--~~~~~~~~~~~~-~l~~~~~d 118 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKM--------LK------RA--D--YTAVDTAKLQMR-RFILGTTE 118 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTT--------SC------SC--C--EEEEEEECSSSC-EEEEEETT
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeE--------Ee------cC--C--ceEEEEEecCCC-EEEEEECC
Confidence 366899999999999999999999999988544331 11 11 1 144557788875 78888888
Q ss_pred CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCC
Q 037120 178 SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHG 257 (489)
Q Consensus 178 ~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~ 257 (489)
|.|++||+... . ....+.+|...|++++|+|++. +|++++.|+.|++||+++++ .+..+.+|..
T Consensus 119 -g~i~iwd~~~~-----~-------~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~--~~~~~~~h~~ 182 (420)
T 3vl1_A 119 -GDIKVLDSNFN-----L-------QREIDQAHVSEITKLKFFPSGE-ALISSSQDMQLKIWSVKDGS--NPRTLIGHRA 182 (420)
T ss_dssp -SCEEEECTTSC-----E-------EEEETTSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCC--CCEEEECCSS
T ss_pred -CCEEEEeCCCc-----c-------eeeecccccCccEEEEECCCCC-EEEEEeCCCeEEEEeCCCCc--CceEEcCCCC
Confidence 99999998321 1 1222468999999999999999 99999999999999999877 5566779999
Q ss_pred ceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeC
Q 037120 258 TLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLD 337 (489)
Q Consensus 258 ~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~ 337 (489)
.|.+++|+|+++++++++.||.|++||+++++.+..+..+... ..+|.+++|.+.+.... .......+..+.|+
T Consensus 183 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~-----~~~~~~~v~~~~~s 256 (420)
T 3vl1_A 183 TVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENP-HDGVNSIALFVGTDRQL-----HEISTSKKNNLEFG 256 (420)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBT-TCCEEEEEEEECCCSSC-----GGGCCCCCCTTCSS
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCC-CCCccEEEEecCCccee-----eecccCcccceEEc
Confidence 9999999999999999999999999999999988888754321 23499999988765432 12345677889999
Q ss_pred CCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCC
Q 037120 338 PSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGS 417 (489)
Q Consensus 338 p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~ 417 (489)
|++.++++++.++. ..+++...+........ . ....+..++|+|++..++++|+.|+.|++||+.++
T Consensus 257 ~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~--~---------~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~- 323 (420)
T 3vl1_A 257 TYGKYVIAGHVSGV-ITVHNVFSKEQTIQLPS--K---------FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSP- 323 (420)
T ss_dssp CTTEEEEEEETTSC-EEEEETTTCCEEEEECC--T---------TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT-
T ss_pred CCCCEEEEEcCCCe-EEEEECCCCceeEEccc--c---------cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCC-
Confidence 99999888776654 33555444332221110 0 00123457888888778999999999999999876
Q ss_pred CCCeeeccCcc-cchhhHhhhhcccCCccc-CCCceEEEEeeCCCCeEEeccCcceeEEEeccc
Q 037120 418 SSPSHVDYNED-IESLSERTKLKKENRFVP-LSEGVTACVTHPLNNTIVAGTKNSSLLVVSQKQ 479 (489)
Q Consensus 418 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~~~ 479 (489)
+. +..+. + |...|.++.+ |++.+|++|+.||.|.||....
T Consensus 324 ---------~~~~~~~~------------~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 324 ---------ECPVGEFL------------INEGTPINNVYF-AAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp ---------TSCSEEEE------------ESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECC
T ss_pred ---------cCchhhhh------------ccCCCCceEEEe-CCCCEEEEecCCccEEEEeccC
Confidence 33 34444 4 6777888855 5778999999999999998655
No 31
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.7e-32 Score=271.33 Aligned_cols=349 Identities=14% Similarity=0.186 Sum_probs=205.2
Q ss_pred CCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCC------------CCCCceeEEEe
Q 037120 96 KPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHI------------PLPQQLDAVRW 163 (489)
Q Consensus 96 ~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~------------~~~~~V~~v~~ 163 (489)
...|.+++|+|+|++||+|+.||.|+|||+.+........ .+.......+.+|. .. |.+++|
T Consensus 28 ~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~---~~~~~~~~~~~~h~~~~~~~~~~~~~~~---V~~l~~ 101 (447)
T 3dw8_B 28 ADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHS---RGEYNVYSTFQSHEPEFDYLKSLEIEEK---INKIRW 101 (447)
T ss_dssp GGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCC---CCCEEEEEEEECCCCEEEGGGTEEECCC---CCEEEE
T ss_pred cCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCccc---ccceeEecccccccccccccccccccCc---eEEEEE
Confidence 3569999999999999999999999999998744211000 00112223345565 44 999999
Q ss_pred eCCCC-CEEEEEecCCCEEEEEEeccCCCCC----------------------ceeeee------ceeeeeecCCcccCe
Q 037120 164 NLANQ-DEVACASTRSNVVSIYDIGYISDEP----------------------VEVLKT------RRSVTVVGSDVQKGL 214 (489)
Q Consensus 164 ~~~~~-~~l~s~~~d~g~i~vwd~~~~~~~~----------------------~~~~~~------~~~~~~~~~~h~~~v 214 (489)
+|++. ..|++++.| ++|++||+....... ...+.+ .........+|...|
T Consensus 102 ~~~~~~~~l~s~s~d-~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 180 (447)
T 3dw8_B 102 LPQKNAAQFLLSTND-KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHI 180 (447)
T ss_dssp CCCCSSSEEEEEECS-SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCC
T ss_pred cCCCCcceEEEeCCC-CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcce
Confidence 99973 477788877 999999995421100 000000 000001136799999
Q ss_pred eEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCcee-------eccCCCCceeEEEEeecC-CEEEEEeCCCeEEEEEcC
Q 037120 215 SDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLE-------LSTGSHGTLNSIQLHAEN-QIIFAAGKHGSIYLWDLR 286 (489)
Q Consensus 215 ~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-------~~~~h~~~v~~~~~~p~~-~~l~~~~~dg~i~lwd~~ 286 (489)
++++|+|++. +|++| .|+.|++||+++... ++. .+.+|...|++++|+|++ .++++++.||.|++||++
T Consensus 181 ~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 181 NSISINSDYE-TYLSA-DDLRINLWHLEITDR-SFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR 257 (447)
T ss_dssp CEEEECTTSS-EEEEE-CSSEEEEEETTEEEE-EEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred EEEEEcCCCC-EEEEe-CCCeEEEEECCCCCc-eeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECc
Confidence 9999999998 89998 799999999985332 232 255899999999999998 999999999999999999
Q ss_pred CCcc----cceeecCCccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeec-c
Q 037120 287 GGRT----SAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYN-S 361 (489)
Q Consensus 287 ~~~~----~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~-~ 361 (489)
+++. +..+..|.... .......+...|.+++|+|++.++++++. +-..++++.. +
T Consensus 258 ~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~ 317 (447)
T 3dw8_B 258 ASALCDRHSKLFEEPEDPS------------------NRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNMEN 317 (447)
T ss_dssp TCSSSCTTCEEECCC-----------------------CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTCCS
T ss_pred CCccccceeeEeccCCCcc------------------ccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCCCc
Confidence 9876 56666665310 00001112234444555555554444333 2123333332 2
Q ss_pred ceeeecCCCCCCcCCCC---ccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccch----hh-
Q 037120 362 RVSHVHCPPPAWLSDSN---NSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIES----LS- 433 (489)
Q Consensus 362 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~----~~- 433 (489)
................. ..........++|+|++. ++++|+.|+.|+|||+.++.. ..+...+.... ..
T Consensus 318 ~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~-~l~s~s~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~ 394 (447)
T 3dw8_B 318 RPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDS-VVMTGSYNNFFRMFDRNTKRD--ITLEASRENNKPRTVLKP 394 (447)
T ss_dssp SCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSS-EEEEECSTTEEEEEETTTCCE--EEEECCSTTCCTTCBCCC
T ss_pred cccceeeccccccccccccccccccccceEEEECCCCC-EEEEeccCCEEEEEEcCCCcc--eeeeecccccccccccCC
Confidence 11111100000000000 000000112367888755 568899999999999987721 00000000000 00
Q ss_pred ----Hhhh---hcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEecc
Q 037120 434 ----ERTK---LKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQK 478 (489)
Q Consensus 434 ----~~~~---~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~~ 478 (489)
.... .......+.+...|.+++|||++++||+++.++ +.+|+.|
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 395 RKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred ccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 0000 000001235678899999999999999999876 7777665
No 32
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=8.8e-33 Score=259.13 Aligned_cols=248 Identities=12% Similarity=0.168 Sum_probs=186.6
Q ss_pred cccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEE
Q 037120 148 HLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRL 227 (489)
Q Consensus 148 ~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 227 (489)
+.+|... |.+++|+|+++ +|++++.| |+|++||+... .. ...+..|...|.+++|+|+++ +|
T Consensus 9 ~~~h~~~---V~~~~fsp~~~-~l~s~~~d-g~v~lWd~~~~-----~~-------~~~~~~~~~~v~~~~~~~~~~-~l 70 (304)
T 2ynn_A 9 FSNRSDR---VKGIDFHPTEP-WVLTTLYS-GRVELWNYETQ-----VE-------VRSIQVTETPVRAGKFIARKN-WI 70 (304)
T ss_dssp EEEECSC---EEEEEECSSSS-EEEEEETT-SEEEEEETTTT-----EE-------EEEEECCSSCEEEEEEEGGGT-EE
T ss_pred ecCCCCc---eEEEEECCCCC-EEEEEcCC-CcEEEEECCCC-----ce-------eEEeeccCCcEEEEEEeCCCC-EE
Confidence 4567776 99999999986 78888888 99999999322 11 122367888999999999999 99
Q ss_pred EEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcc-cceeecCCccCCCCee
Q 037120 228 IASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRT-SAPFHNHKEVCHLPLT 306 (489)
Q Consensus 228 ~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~-~~~~~~~~~~~~~~v~ 306 (489)
++|+.|++|++||+++++ ++..+.+|...|.+++|+|+++++++|+.||+|++||++++.. ...+.+|... |.
T Consensus 71 ~s~s~d~~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~----v~ 144 (304)
T 2ynn_A 71 IVGSDDFRIRVFNYNTGE--KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHF----VM 144 (304)
T ss_dssp EEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSC----EE
T ss_pred EEECCCCEEEEEECCCCc--EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCc----EE
Confidence 999999999999999887 6667789999999999999999999999999999999998744 5667788766 88
Q ss_pred EEEeCCC-CcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccC
Q 037120 307 SLKLASM-LEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLH 385 (489)
Q Consensus 307 ~l~~~~~-~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (489)
+++|+|+ +..+++ ++.|+. ..++++..+........ . ....
T Consensus 145 ~v~~~p~~~~~l~s--------------------------gs~D~~-v~iwd~~~~~~~~~~~~------~-----~~~~ 186 (304)
T 2ynn_A 145 CVAFNPKDPSTFAS--------------------------GCLDRT-VKVWSLGQSTPNFTLTT------G-----QERG 186 (304)
T ss_dssp EEEECTTCTTEEEE--------------------------EETTSE-EEEEETTCSSCSEEEEC------C-----CTTC
T ss_pred EEEECCCCCCEEEE--------------------------EeCCCe-EEEEECCCCCccceecc------C-----CcCc
Confidence 8888873 444443 221111 11222211110000000 0 0001
Q ss_pred CCcceeecC-CcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEE
Q 037120 386 LRKPSWLST-NSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIV 464 (489)
Q Consensus 386 ~~~~~~~~~-~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~ 464 (489)
+....|.|. ++.++++|+.|+.|+|||+.++ +.+..+. +|...|.+++|+|+++.|+
T Consensus 187 v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~----------~~~~~~~------------~h~~~v~~~~~~p~~~~l~ 244 (304)
T 2ynn_A 187 VNYVDYYPLPDKPYMITASDDLTIKIWDYQTK----------SCVATLE------------GHMSNVSFAVFHPTLPIII 244 (304)
T ss_dssp EEEEEECCSTTCCEEEEEETTSEEEEEETTTT----------EEEEEEE------------CCSSCEEEEEECSSSSEEE
T ss_pred EEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC----------ccceeeC------------CCCCCEEEEEECCCCCEEE
Confidence 112233332 3678999999999999999988 7777777 9999999999999999999
Q ss_pred eccCcceeEEEeccc
Q 037120 465 AGTKNSSLLVVSQKQ 479 (489)
Q Consensus 465 sgs~dg~i~v~~~~~ 479 (489)
+|+.||+|+||..+.
T Consensus 245 s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 245 SGSEDGTLKIWNSST 259 (304)
T ss_dssp EEETTSCEEEEETTT
T ss_pred EEcCCCeEEEEECCC
Confidence 999999999998654
No 33
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.8e-32 Score=260.42 Aligned_cols=322 Identities=9% Similarity=0.048 Sum_probs=214.0
Q ss_pred cCCCceeEEEECCC----CcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCC-
Q 037120 94 FGKPGISALDFDCK----GIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQ- 168 (489)
Q Consensus 94 ~~~~~V~~~~fs~~----g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~- 168 (489)
.|...|.+++|+|+ ...+++++.++.|+|||+.+...... +..+. ...|... |.+++|+|++.
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~--------~~~~~-~~~~~~~---v~~~~~~~~~~~ 83 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRL--------LQSYV-DADADEN---FYTCAWTYDSNT 83 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEE--------EEEEE-CSCTTCC---EEEEEEEECTTT
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEe--------eeecc-ccCCCCc---EEEEEeccCCCC
Confidence 46678999999984 45666777777999999987544331 11111 0113344 99999999843
Q ss_pred --CEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEec-CCCcEEEEEeCCCcEEEEECCCCC
Q 037120 169 --DEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSA-VNTSRLIASDTHGVVNIWDRRVGV 245 (489)
Q Consensus 169 --~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~s~dg~i~iwd~~~~~ 245 (489)
.+|++++.| |.|++||+... .. ...+.+|...|++++|+| ++. +|++++.||.|++||+++++
T Consensus 84 ~~~~l~~~~~d-g~i~v~d~~~~-----~~-------~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~ 149 (366)
T 3k26_A 84 SHPLLAVAGSR-GIIRIINPITM-----QC-------IKHYVGHGNAINELKFHPRDPN-LLLSVSKDHALRLWNIQTDT 149 (366)
T ss_dssp CCEEEEEEETT-CEEEEECTTTC-----CE-------EEEEESCCSCEEEEEECSSCTT-EEEEEETTSCEEEEETTTTE
T ss_pred CCCEEEEecCC-CEEEEEEchhc-----eE-------eeeecCCCCcEEEEEECCCCCC-EEEEEeCCCeEEEEEeecCe
Confidence 378888888 99999999432 11 122367999999999999 666 99999999999999999876
Q ss_pred cCceeec---cCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceee---
Q 037120 246 LPSLELS---TGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGT--- 319 (489)
Q Consensus 246 ~~~~~~~---~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~--- 319 (489)
.+..+ ..|...|.+++|+|+++++++++.||.|++||+++++.+..+..+ +.|+|++..+..
T Consensus 150 --~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 217 (366)
T 3k26_A 150 --LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKES----------YDYNPNKTNRPFISQ 217 (366)
T ss_dssp --EEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHH----------HTCCGGGCSSCCCCE
T ss_pred --EEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCcccccccee----------EEecCCCCcccccce
Confidence 44444 589999999999999999999999999999999987765544321 112222221110
Q ss_pred -----ccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCC--cCCCCccccccCCCcceee
Q 037120 320 -----LKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAW--LSDSNNSADQLHLRKPSWL 392 (489)
Q Consensus 320 -----~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 392 (489)
.......+...|.++.|+ +.++++++.++. ..+++...+............ ............+..++|+
T Consensus 218 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 294 (366)
T 3k26_A 218 KIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENA-IVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFS 294 (366)
T ss_dssp EECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSE-EEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCE
T ss_pred eeccCccccccCCcceEEEEEEc--CCEEEEEecCCE-EEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEc
Confidence 001112255667777776 445555544332 334444333210000000000 0000000011234456777
Q ss_pred cCC-cEEEEeecCCCcEEEEeccCCCCCCeeeccCcccc----hhhHhhhhcccCCcccC--CCceEEEEeeCCCCeEEe
Q 037120 393 STN-SIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIE----SLSERTKLKKENRFVPL--SEGVTACVTHPLNNTIVA 465 (489)
Q Consensus 393 ~~~-~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~h--~~~V~~va~~p~~~~i~s 465 (489)
|+. +.++++|+.|+.|++||+.++ +... .+. +| ...|++++|+|++.+|++
T Consensus 295 ~~~~~~~l~~~~~dg~i~vwd~~~~----------~~~~~~~~~~~------------~~~~~~~v~~~~~s~~~~~l~s 352 (366)
T 3k26_A 295 MDFWQKMLALGNQVGKLYVWDLEVE----------DPHKAKCTTLT------------HHKCGAAIRQTSFSRDSSILIA 352 (366)
T ss_dssp ECTTSSEEEEECTTSCEEEEECCSS----------SGGGCEEEEEC------------CTTCCSCEEEEEECTTSSEEEE
T ss_pred CCCCCcEEEEEecCCcEEEEECCCC----------CCccccceEEc------------ccccCCceEEEEeCCCCCeEEE
Confidence 772 667888899999999999887 4332 333 55 799999999999999999
Q ss_pred ccCcceeEEEecc
Q 037120 466 GTKNSSLLVVSQK 478 (489)
Q Consensus 466 gs~dg~i~v~~~~ 478 (489)
|+.||.|.||...
T Consensus 353 ~~~dg~i~iwd~~ 365 (366)
T 3k26_A 353 VCDDASIWRWDRL 365 (366)
T ss_dssp EETTSEEEEEEC-
T ss_pred EeCCCEEEEEEec
Confidence 9999999999754
No 34
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.9e-31 Score=257.98 Aligned_cols=324 Identities=15% Similarity=0.190 Sum_probs=221.6
Q ss_pred cccCCCceeEEEECC-CCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 92 RSFGKPGISALDFDC-KGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~-~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
+..|...|.+++|+| ++++||+|+.||.|+|||+.+............ .........+|... |.+++|+|++..+
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---v~~~~~~~~~~~~ 114 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAV-CSIGRDHPDVHRYS---VETVQWYPHDTGM 114 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEE-EEECTTCTTCCSSC---EEEEEECTTCTTC
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecccc-ccccccccccCCCc---EEEEEEccCCCcE
Confidence 445677899999999 999999999999999999998543331000000 00000001235555 9999999966668
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCC--cEEEEEeCCCcEEEEECCCCCcCc
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNT--SRLIASDTHGVVNIWDRRVGVLPS 248 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~~l~s~s~dg~i~iwd~~~~~~~~ 248 (489)
+++++.| |.|++||+... ..... ..+...+.++.|++.+. .++++++.|+.|++||+++++ .
T Consensus 115 l~s~~~d-~~i~iwd~~~~-----~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--~ 178 (408)
T 4a11_B 115 FTSSSFD-KTLKVWDTNTL-----QTADV--------FNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS--C 178 (408)
T ss_dssp EEEEETT-SEEEEEETTTT-----EEEEE--------EECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC--C
T ss_pred EEEEeCC-CeEEEeeCCCC-----cccee--------ccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc--e
Confidence 8888888 99999999432 22111 22566899999998543 289999999999999999876 5
Q ss_pred eeeccCCCCceeEEEEeecCCE-EEEEeCCCeEEEEEcCCCcc-cceeecCCccCCCCeeEEEeCCCCcceeecccccee
Q 037120 249 LELSTGSHGTLNSIQLHAENQI-IFAAGKHGSIYLWDLRGGRT-SAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKI 326 (489)
Q Consensus 249 ~~~~~~h~~~v~~~~~~p~~~~-l~~~~~dg~i~lwd~~~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~ 326 (489)
+..+..|...|.+++|+|++++ +++++.||.|++||++++.. +..+..+... ...........
T Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 243 (408)
T 4a11_B 179 SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGK---------------KSQAVESANTA 243 (408)
T ss_dssp CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTC---------------SCCCTTTSSCS
T ss_pred eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccc---------------cceeecccccc
Confidence 6667789999999999999995 78888999999999998763 4444333211 00011122234
Q ss_pred eccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCC
Q 037120 327 VSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDH 406 (489)
Q Consensus 327 ~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~ 406 (489)
+...|..++|+|++.++++++.++. ..+++...+...........-.. .......+.......++.++.|+
T Consensus 244 ~~~~v~~~~~~~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 314 (408)
T 4a11_B 244 HNGKVNGLCFTSDGLHLLTVGTDNR-MRLWNSSNGENTLVNYGKVCNNS--------KKGLKFTVSCGCSSEFVFVPYGS 314 (408)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCCBCCCCCCCCCCCC--------SSCCCCEECCSSSSCEEEEEETT
T ss_pred ccCceeEEEEcCCCCEEEEecCCCe-EEEEECCCCccceeccccccccc--------cccceeEEecCCCceEEEEecCC
Confidence 5566777888888877777665554 33555544433221111000000 00011222233344555667899
Q ss_pred cEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEeccccc
Q 037120 407 GIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQKQQC 481 (489)
Q Consensus 407 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~~~~~ 481 (489)
.|++||+.++ +.+..+. +|.+.|++++|+|++.+|++|+.||.|.||..+...
T Consensus 315 ~i~v~d~~~~----------~~~~~~~------------~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 315 TIAVYTVYSG----------EQITMLK------------GHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp EEEEEETTTC----------CEEEEEC------------CCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--
T ss_pred EEEEEECcCC----------cceeeec------------cCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC
Confidence 9999999998 7777777 999999999999999999999999999999876543
No 35
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3e-32 Score=259.47 Aligned_cols=248 Identities=14% Similarity=0.158 Sum_probs=179.2
Q ss_pred CCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEE
Q 037120 95 GKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACA 174 (489)
Q Consensus 95 ~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~ 174 (489)
++.+|.+++|+|++ .|++|+.||+|+|||+.+.+.... ......+|... |++++|+|++. +|+++
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~----------~~~~~~~H~~~---V~~v~~spdg~-~l~sg 145 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVASDSGAVELWELDENETLIV----------SKFCKYEHDDI---VSTVSVLSSGT-QAVSG 145 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEE----------EEEEEECCSSC---EEEEEECTTSS-EEEEE
T ss_pred cCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeE----------eeccccCCCCC---EEEEEECCCCC-EEEEE
Confidence 34579999999996 688999999999999988443321 11122457776 99999999986 88888
Q ss_pred ecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeec--
Q 037120 175 STRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELS-- 252 (489)
Q Consensus 175 ~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-- 252 (489)
+.| ++|++||+..+ . ...++.+|...|++++|+|++..+|++++.|++|++||+++++ +...+
T Consensus 146 s~d-~~i~iwd~~~~-----~-------~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~--~~~~~~~ 210 (344)
T 4gqb_B 146 SKD-ICIKVWDLAQQ-----V-------VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK--PASQIGC 210 (344)
T ss_dssp ETT-SCEEEEETTTT-----E-------EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS--CEEECC-
T ss_pred eCC-CeEEEEECCCC-----c-------EEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccc--eeeeeec
Confidence 888 99999999432 1 2233488999999999999997689999999999999999876 33333
Q ss_pred cCCCCceeEEEEeec-CCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCc-ceeeccccceeeccc
Q 037120 253 TGSHGTLNSIQLHAE-NQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLE-KIGTLKAQSKIVSQE 330 (489)
Q Consensus 253 ~~h~~~v~~~~~~p~-~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~i~~~~~~~~~~~~~ 330 (489)
..|...+.+++|+|+ +.++++|+.||+|++||+++++++..+.+|... |++++|+|++. ++++..
T Consensus 211 ~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~----v~~v~fsp~g~~~lasgs--------- 277 (344)
T 4gqb_B 211 SAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQC----VTGLVFSPHSVPFLASLS--------- 277 (344)
T ss_dssp ---CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSC----EEEEEECSSSSCCEEEEE---------
T ss_pred ceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCC----EEEEEEccCCCeEEEEEe---------
Confidence 355667999999995 456778888999999999999999999999877 99999988874 444321
Q ss_pred eeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEE
Q 037120 331 IHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHL 410 (489)
Q Consensus 331 i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~v 410 (489)
.|+. ..+++...+....... +...+..++|+|++..++++||.|++|++
T Consensus 278 -----------------~D~~-i~vwd~~~~~~~~~~~-------------H~~~V~~v~~sp~~~~llas~s~D~~v~~ 326 (344)
T 4gqb_B 278 -----------------EDCS-LAVLDSSLSELFRSQA-------------HRDFVRDATWSPLNHSLLTTVGWDHQVVH 326 (344)
T ss_dssp -----------------TTSC-EEEECTTCCEEEEECC-------------CSSCEEEEEECSSSTTEEEEEETTSCEEE
T ss_pred -----------------CCCe-EEEEECCCCcEEEEcC-------------CCCCEEEEEEeCCCCeEEEEEcCCCeEEE
Confidence 1111 1112211111111000 00123446788888889999999999999
Q ss_pred EeccCC
Q 037120 411 LDFFPG 416 (489)
Q Consensus 411 wd~~~~ 416 (489)
|++.+.
T Consensus 327 w~v~~~ 332 (344)
T 4gqb_B 327 HVVPTE 332 (344)
T ss_dssp EECCC-
T ss_pred EECCCC
Confidence 999876
No 36
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.8e-32 Score=260.67 Aligned_cols=314 Identities=10% Similarity=0.049 Sum_probs=206.5
Q ss_pred ccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEE
Q 037120 93 SFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVA 172 (489)
Q Consensus 93 ~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~ 172 (489)
..+...|.+++|+|+|++||+|+.||.|+|||+.+... .....+.+|... |.+++|+|++. +|+
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~------------~~~~~~~~h~~~---v~~~~~~~~~~-~l~ 68 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW------------VQVHELKEHNGQ---VTGVDWAPDSN-RIV 68 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE------------EEEEEEECCSSC---EEEEEEETTTT-EEE
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcE------------EeeeeecCCCCc---ccEEEEeCCCC-EEE
Confidence 34667899999999999999999999999999987431 111223456655 99999999875 778
Q ss_pred EEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcC--cee
Q 037120 173 CASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLP--SLE 250 (489)
Q Consensus 173 s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~--~~~ 250 (489)
+++.| |.|++||+... .... ...+.+|...|.+++|+|++. +|++++.|+.|++||++..+.. ...
T Consensus 69 ~~~~d-g~i~vwd~~~~-----~~~~-----~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~ 136 (372)
T 1k8k_C 69 TCGTD-RNAYVWTLKGR-----TWKP-----TLVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKH 136 (372)
T ss_dssp EEETT-SCEEEEEEETT-----EEEE-----EEECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEE
T ss_pred EEcCC-CeEEEEECCCC-----eeee-----eEEeecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeee
Confidence 88877 99999999432 1111 112366889999999999998 9999999999999999986532 222
Q ss_pred eccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCC------------------CcccceeecCCccCCCCeeEEEeCC
Q 037120 251 LSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRG------------------GRTSAPFHNHKEVCHLPLTSLKLAS 312 (489)
Q Consensus 251 ~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~------------------~~~~~~~~~~~~~~~~~v~~l~~~~ 312 (489)
....|...|.+++|+|+++++++++.||.|++||++. ++.+..+..|... |.+++|+
T Consensus 137 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----v~~~~~~- 211 (372)
T 1k8k_C 137 IKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW----VHGVCFS- 211 (372)
T ss_dssp ECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC----EEEEEEC-
T ss_pred eecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCe----EEEEEEC-
Confidence 3357899999999999999999999999999999753 3334444444433 5555554
Q ss_pred CCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceee
Q 037120 313 MLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWL 392 (489)
Q Consensus 313 ~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (489)
|++.++++++.++. ..+++...+........ . ...+..++|+
T Consensus 212 -------------------------~~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~------~------~~~v~~~~~~ 253 (372)
T 1k8k_C 212 -------------------------ANGSRVAWVSHDST-VCLADADKKMAVATLAS------E------TLPLLAVTFI 253 (372)
T ss_dssp -------------------------SSSSEEEEEETTTE-EEEEEGGGTTEEEEEEC------S------SCCEEEEEEE
T ss_pred -------------------------CCCCEEEEEeCCCE-EEEEECCCCceeEEEcc------C------CCCeEEEEEe
Confidence 44444444443322 23344433332221111 0 0122345677
Q ss_pred cCCcEEEEeecCCCcEEEEeccC--CCCC-CeeeccC--------cccchhhHhhh-hccc------CCc-ccCCCceEE
Q 037120 393 STNSIYAVGSSSDHGIHLLDFFP--GSSS-PSHVDYN--------EDIESLSERTK-LKKE------NRF-VPLSEGVTA 453 (489)
Q Consensus 393 ~~~~~~l~sgs~d~~i~vwd~~~--~~~~-~~~~~~~--------~~~~~~~~~~~-~~~~------~~~-~~h~~~V~~ 453 (489)
|++ .++++| .|+.|++||+.. +.-. ....+.. ..+..+..... .... ..+ .+|.+.|++
T Consensus 254 ~~~-~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 331 (372)
T 1k8k_C 254 TES-SLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQ 331 (372)
T ss_dssp ETT-EEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEE
T ss_pred cCC-CEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcce
Confidence 765 466666 899999999987 3000 0000000 00001100000 0000 122 389999999
Q ss_pred EEee-CCC---CeEEeccCcceeEEEeccc
Q 037120 454 CVTH-PLN---NTIVAGTKNSSLLVVSQKQ 479 (489)
Q Consensus 454 va~~-p~~---~~i~sgs~dg~i~v~~~~~ 479 (489)
++|+ +++ .+|+||+.||.|+||..+.
T Consensus 332 ~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 332 ISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp EEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred eEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 9977 555 8999999999999997654
No 37
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.4e-32 Score=301.89 Aligned_cols=328 Identities=12% Similarity=0.102 Sum_probs=233.9
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
+..|...|.+++|+|+|++||+|+.||+|+|||+.+..... .+.+|... |.+++|+|++. .+
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~--------------~~~~h~~~---v~~~~~s~~~~-~l 672 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLL--------------DIKAHEDE---VLCCAFSSDDS-YI 672 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE--------------EECCCSSC---EEEEEECTTSS-EE
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEE--------------EeccCCCC---EEEEEEecCCC-EE
Confidence 45677789999999999999999999999999998854433 12456555 99999999986 78
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCC-cEEEEEeCCCcEEEEECCCCCcCcee
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNT-SRLIASDTHGVVNIWDRRVGVLPSLE 250 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~ 250 (489)
++++.| |+|++||+..+ . ....+.+|...|.+++|+|++. .++++++.|+.|++||+++++ +..
T Consensus 673 ~s~~~d-~~v~vwd~~~~-----~-------~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~--~~~ 737 (1249)
T 3sfz_A 673 ATCSAD-KKVKIWDSATG-----K-------LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE--CRN 737 (1249)
T ss_dssp EEEETT-SEEEEEETTTC-----C-------EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS--EEE
T ss_pred EEEeCC-CeEEEEECCCC-----c-------eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc--hhh
Confidence 888877 99999999432 1 1222367999999999999532 388999999999999999877 677
Q ss_pred eccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceee-----------------------------------
Q 037120 251 LSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFH----------------------------------- 295 (489)
Q Consensus 251 ~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~----------------------------------- 295 (489)
.+.+|...|++++|+|+++++++++.||.|++||+++++....+.
T Consensus 738 ~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~ 817 (1249)
T 3sfz_A 738 TMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA 817 (1249)
T ss_dssp EECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE
T ss_pred eecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc
Confidence 777999999999999999999999999999999998876533332
Q ss_pred --------------------cCCccCCCCeeEEEeCCCCcceeeccc----------------cceeeccceeEEEeCCC
Q 037120 296 --------------------NHKEVCHLPLTSLKLASMLEKIGTLKA----------------QSKIVSQEIHSIDLDPS 339 (489)
Q Consensus 296 --------------------~~~~~~~~~v~~l~~~~~~~~i~~~~~----------------~~~~~~~~i~~~~~~p~ 339 (489)
+|.. +|.+++|+|++..++.... ....+...|.++.|+|+
T Consensus 818 ~~~v~~~d~~~~~~~~~~~~~~~~----~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spd 893 (1249)
T 3sfz_A 818 KNKVLLFDIHTSGLLAEIHTGHHS----TIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPD 893 (1249)
T ss_dssp TTEEEEEETTTCCEEEEEECSSSS----CCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred CCcEEEEEecCCCceeEEcCCCCC----ceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCC
Confidence 2222 3666677776665532111 11234556777888887
Q ss_pred CCeEEEEEecCCceEEEEeeccceee------------------ec---CCCC--CCcCCCC--ccccccCCCcceeecC
Q 037120 340 CSYQLAFHLDDGWSGVLDVYNSRVSH------------------VH---CPPP--AWLSDSN--NSADQLHLRKPSWLST 394 (489)
Q Consensus 340 ~~~~~~~~~~~~w~~~~~~~~~~~~~------------------~~---~~~~--~~~~~~~--~~~~~~~~~~~~~~~~ 394 (489)
+.++++++.++. ..+++...+.... .. .... .+..... ...........+|+|+
T Consensus 894 g~~l~s~s~dg~-v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 972 (1249)
T 3sfz_A 894 GSSFLTASDDQT-IRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPH 972 (1249)
T ss_dssp SSEEEEEETTSC-EEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTT
T ss_pred CCEEEEEeCCCe-EEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCC
Confidence 777777666554 1122211100000 00 0000 0000000 0000112344567776
Q ss_pred CcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEE
Q 037120 395 NSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLV 474 (489)
Q Consensus 395 ~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v 474 (489)
+ .++++|+.||.|++||+.++ +....+. +|.+.|++++|+|++++|++|+.||.|.+
T Consensus 973 g-~~l~~g~~~g~i~i~d~~~~----------~~~~~~~------------~h~~~v~~l~~s~dg~~l~s~~~dg~i~v 1029 (1249)
T 3sfz_A 973 L-EYVAFGDEDGAIKIIELPNN----------RVFSSGV------------GHKKAVRHIQFTADGKTLISSSEDSVIQV 1029 (1249)
T ss_dssp S-SEEEEEETTSCCEEEETTTT----------SCEEECC------------CCSSCCCCEEECSSSSCEEEECSSSBEEE
T ss_pred C-CEEEEEcCCCCEEEEEcCCC----------ceeeecc------------cCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 5 46777889999999999988 6666666 89999999999999999999999999999
Q ss_pred Eecccc
Q 037120 475 VSQKQQ 480 (489)
Q Consensus 475 ~~~~~~ 480 (489)
|.....
T Consensus 1030 wd~~~~ 1035 (1249)
T 3sfz_A 1030 WNWQTG 1035 (1249)
T ss_dssp EETTTT
T ss_pred EECCCC
Confidence 986543
No 38
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.8e-32 Score=265.80 Aligned_cols=265 Identities=14% Similarity=0.200 Sum_probs=192.3
Q ss_pred cccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEE
Q 037120 148 HLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRL 227 (489)
Q Consensus 148 ~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 227 (489)
+.+|... |++++|+|++. ++++++.| |+|+|||+..+. ....+.+|...|++++|+|++. +|
T Consensus 104 l~gh~~~---V~~~~~~p~~~-~l~s~s~D-g~i~vwd~~~~~------------~~~~l~~h~~~V~~v~~~~~~~-~l 165 (410)
T 1vyh_C 104 LSGHRSP---VTRVIFHPVFS-VMVSASED-ATIKVWDYETGD------------FERTLKGHTDSVQDISFDHSGK-LL 165 (410)
T ss_dssp EECCSSC---EEEEEECSSSS-EEEEEESS-SCEEEEETTTCC------------CCEEECCCSSCEEEEEECTTSS-EE
T ss_pred ecccCCc---EEEEEEcCCCC-EEEEEeCC-CeEEEEECCCCc------------EEEEEeccCCcEEEEEEcCCCC-EE
Confidence 4567777 99999999985 88888888 999999994331 1122378999999999999999 99
Q ss_pred EEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeE
Q 037120 228 IASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTS 307 (489)
Q Consensus 228 ~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~ 307 (489)
++|+.|++|++||+++.+ ++..+.+|...|.+++|+|+++++++|+.|++|++||++++.++..+.+|... |.+
T Consensus 166 ~sgs~D~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~----v~~ 239 (410)
T 1vyh_C 166 ASCSADMTIKLWDFQGFE--CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW----VRM 239 (410)
T ss_dssp EEEETTSCCCEEETTSSC--EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC----EEE
T ss_pred EEEeCCCeEEEEeCCCCc--eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCcc----EEE
Confidence 999999999999998876 77778899999999999999999999999999999999999999999999877 999
Q ss_pred EEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCcc-ccccCC
Q 037120 308 LKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNS-ADQLHL 386 (489)
Q Consensus 308 l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 386 (489)
+.|+|++..+++......+. ++ .+ ..+. ....+.+|...+.++ .|.+..... ......
T Consensus 240 ~~~~~~g~~l~s~s~D~~v~---vw--d~-~~~~-------------~~~~~~~h~~~v~~~--~~~~~~~~~~~~~~~~ 298 (410)
T 1vyh_C 240 VRPNQDGTLIASCSNDQTVR---VW--VV-ATKE-------------CKAELREHRHVVECI--SWAPESSYSSISEATG 298 (410)
T ss_dssp EEECTTSSEEEEEETTSCEE---EE--ET-TTCC-------------EEEEECCCSSCEEEE--EECCSCGGGGGGGCCS
T ss_pred EEECCCCCEEEEEcCCCeEE---EE--EC-CCCc-------------eeeEecCCCceEEEE--EEcCcccccchhhhcc
Confidence 99998888775422111110 00 00 0000 111111121111111 111110000 000000
Q ss_pred CcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEec
Q 037120 387 RKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAG 466 (489)
Q Consensus 387 ~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sg 466 (489)
.........+.++++|+.|+.|++||+.++ +.+..+. +|.+.|++++|+|++.+|++|
T Consensus 299 ~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~----------~~~~~~~------------~h~~~v~~v~~~~~g~~l~s~ 356 (410)
T 1vyh_C 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTG----------MCLMTLV------------GHDNWVRGVLFHSGGKFILSC 356 (410)
T ss_dssp CC-------CCEEEEEETTSEEEEEETTTT----------EEEEEEE------------CCSSCEEEEEECSSSSCEEEE
T ss_pred ccccccCCCCCEEEEEeCCCeEEEEECCCC----------ceEEEEE------------CCCCcEEEEEEcCCCCEEEEE
Confidence 000001112678999999999999999988 7777777 999999999999999999999
Q ss_pred cCcceeEEEeccc
Q 037120 467 TKNSSLLVVSQKQ 479 (489)
Q Consensus 467 s~dg~i~v~~~~~ 479 (489)
+.||.|+||..+.
T Consensus 357 s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 357 ADDKTLRVWDYKN 369 (410)
T ss_dssp ETTTEEEEECCTT
T ss_pred eCCCeEEEEECCC
Confidence 9999999997654
No 39
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-31 Score=258.64 Aligned_cols=260 Identities=10% Similarity=0.085 Sum_probs=196.9
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCC-CCE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLAN-QDE 170 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~-~~~ 170 (489)
+..|...|.+++|+|+|++||+|+.||.|+|||+.... ......+.+|... |++++|+++. ..+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~------------~~~~~~~~~h~~~---v~~~~~~~~~~~~~ 71 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET------------HKLIDTLTGHEGP---VWRVDWAHPKFGTI 71 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE------------EEEEEEECCCSSC---EEEEEECCGGGCSE
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc------------ceeeeEecCCCCc---EEEEEeCCCCCCCE
Confidence 55677889999999999999999999999999997421 1111223456666 9999998761 348
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecC--CCcEEEEEeCCCcEEEEECCCCCcCc
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAV--NTSRLIASDTHGVVNIWDRRVGVLPS 248 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~s~dg~i~iwd~~~~~~~~ 248 (489)
|++++.| |.|++||+.... .. ....+.+|...|.+++|+|+ +. +|++++.|+.|++||++......
T Consensus 72 l~s~~~d-g~v~iwd~~~~~------~~----~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~ 139 (379)
T 3jrp_A 72 LASCSYD-GKVLIWKEENGR------WS----QIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTS 139 (379)
T ss_dssp EEEEETT-SCEEEEEEETTE------EE----EEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSCCC
T ss_pred EEEeccC-CEEEEEEcCCCc------ee----EeeeecCCCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCcee
Confidence 8888888 999999994321 11 12223778999999999999 77 99999999999999999875444
Q ss_pred eeeccCCCCceeEEEEee-------------cCCEEEEEeCCCeEEEEEcCCCcc----cceeecCCccCCCCeeEEEeC
Q 037120 249 LELSTGSHGTLNSIQLHA-------------ENQIIFAAGKHGSIYLWDLRGGRT----SAPFHNHKEVCHLPLTSLKLA 311 (489)
Q Consensus 249 ~~~~~~h~~~v~~~~~~p-------------~~~~l~~~~~dg~i~lwd~~~~~~----~~~~~~~~~~~~~~v~~l~~~ 311 (489)
...+..|...|.+++|+| ++.++++++.||.|++||++++.. +..+.+|... |.+++|+
T Consensus 140 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~----v~~~~~s 215 (379)
T 3jrp_A 140 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW----VRDVAWS 215 (379)
T ss_dssp EEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC----EEEEEEC
T ss_pred eEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCc----EeEEEEC
Confidence 445668999999999999 699999999999999999987653 2344445444 5555444
Q ss_pred CCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCccee
Q 037120 312 SMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSW 391 (489)
Q Consensus 312 ~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (489)
|++ . .
T Consensus 216 p~~--------------------------~----------------------------------~--------------- 220 (379)
T 3jrp_A 216 PTV--------------------------L----------------------------------L--------------- 220 (379)
T ss_dssp CCC--------------------------S----------------------------------S---------------
T ss_pred CCC--------------------------C----------------------------------C---------------
Confidence 431 0 0
Q ss_pred ecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcce
Q 037120 392 LSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSS 471 (489)
Q Consensus 392 ~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~ 471 (489)
+.++++++.|+.|+|||+..+..... ..+.... .|...|++++|+|++.+|++++.||.
T Consensus 221 ----~~~l~s~~~dg~i~iwd~~~~~~~~~-----~~~~~~~------------~~~~~v~~~~~s~~g~~l~~~~~dg~ 279 (379)
T 3jrp_A 221 ----RSYLASVSQDRTCIIWTQDNEQGPWK-----KTLLKEE------------KFPDVLWRASWSLSGNVLALSGGDNK 279 (379)
T ss_dssp ----SEEEEEEETTSCEEEEEESSTTSCCE-----EEESSSS------------CCSSCEEEEEECSSSCCEEEEESSSS
T ss_pred ----CCeEEEEeCCCEEEEEeCCCCCccce-----eeeeccc------------cCCCcEEEEEEcCCCCEEEEecCCCc
Confidence 45788889999999999987610000 0111112 58899999999999999999999999
Q ss_pred eEEEecc
Q 037120 472 LLVVSQK 478 (489)
Q Consensus 472 i~v~~~~ 478 (489)
|.||...
T Consensus 280 i~iw~~~ 286 (379)
T 3jrp_A 280 VTLWKEN 286 (379)
T ss_dssp EEEEEEE
T ss_pred EEEEeCC
Confidence 9999765
No 40
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.1e-31 Score=258.06 Aligned_cols=300 Identities=11% Similarity=0.029 Sum_probs=194.2
Q ss_pred ceeEEEECCCCcEEEEEecCC-------eEEEEeCCCcccccCCCCCCCCCcc--cccccccCCCCCCceeEEEeeCCCC
Q 037120 98 GISALDFDCKGIYLVSATRSG-------CLTVHDFESLYYQCNGTLPGVGLKE--DQSKHLLHIPLPQQLDAVRWNLANQ 168 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~dg-------~i~vwd~~~~~~~~~~~~~~~g~~~--~~~~~~~h~~~~~~V~~v~~~~~~~ 168 (489)
.|.|++|+|||++||+|+.|. .|+||++......... ... ....+..|... |.+++++.+
T Consensus 16 PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~------~~~~~~~~~l~~~~~~---v~s~~~~~~-- 84 (365)
T 4h5i_A 16 PAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKE------QFHILSEFALEDNDDS---PTAIDASKG-- 84 (365)
T ss_dssp CEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHH------HEEEEEEEECCTTSCC---CCEEEEETT--
T ss_pred CEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceee------eeeeeeEEEccCCCCc---eEEEEeCCC--
Confidence 499999999999999998643 5999998763221110 011 11122334444 778887654
Q ss_pred CEEEEEe-----------cCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEE--EeCCCc
Q 037120 169 DEVACAS-----------TRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIA--SDTHGV 235 (489)
Q Consensus 169 ~~l~s~~-----------~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s--~s~dg~ 235 (489)
.++++. .| +++++|++....... ..+.... ......+...+..++|+|||+ ++++ ++.|++
T Consensus 85 -~~~~g~~~~~~~l~s~~~d-~~~r~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~v~fSpDg~-~la~as~~~d~~ 158 (365)
T 4h5i_A 85 -IILVGCNENSTKITQGKGN-KHLRKFKYDKVNDQL-EFLTSVD--FDASTNADDYTKLVYISREGT-VAAIASSKVPAI 158 (365)
T ss_dssp -EEEEECCCCHHHHHHTSCC-CCEEEEEEETTTTEE-EEEEEEC--SSCCCCTTCCEEEEEECTTSS-CEEEEESCSSCE
T ss_pred -EEEEEECCCccEEEEecCC-CcEEEEEecCCCceE-EEeeeec--eeecCCcccCEEEEEEcCCCC-EEEEEECCCCCE
Confidence 455543 34 889999985432211 1111111 111244566789999999999 6554 447999
Q ss_pred EEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccc--eeecCCccCCCCeeEEEeCCC
Q 037120 236 VNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSA--PFHNHKEVCHLPLTSLKLASM 313 (489)
Q Consensus 236 i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~--~~~~~~~~~~~~v~~l~~~~~ 313 (489)
|+|||+++++ ++..+ .|...|.+++|+|+|+++++++. +.+++|+..+++.+. ....|... |++++|+|+
T Consensus 159 i~iwd~~~~~--~~~~~-~~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~----v~~v~fspd 230 (365)
T 4h5i_A 159 MRIIDPSDLT--EKFEI-ETRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWS----LSKINFIAD 230 (365)
T ss_dssp EEEEETTTTE--EEEEE-ECSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEE----EEEEEEEET
T ss_pred EEEeECCCCc--EEEEe-CCCCceEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCCCCCC----EEEEEEcCC
Confidence 9999999876 44344 57788999999999999888875 456777777776533 33456655 888888888
Q ss_pred CcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceE--EEEeeccceeeecCCCCCCcCCCCccccccCCCccee
Q 037120 314 LEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSG--VLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSW 391 (489)
Q Consensus 314 ~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (489)
+..+.+..... ...+ .+........... ......++...+. .++|
T Consensus 231 g~~l~~~s~d~---~~~~----------~i~~~~~~~~~~~~~~~~~~~~~~~~V~--------------------~~~~ 277 (365)
T 4h5i_A 231 DTVLIAASLKK---GKGI----------VLTKISIKSGNTSVLRSKQVTNRFKGIT--------------------SMDV 277 (365)
T ss_dssp TEEEEEEEESS---SCCE----------EEEEEEEETTEEEEEEEEEEESSCSCEE--------------------EEEE
T ss_pred CCEEEEEecCC---ccee----------EEeecccccceecceeeeeecCCCCCeE--------------------eEEE
Confidence 87665321100 0000 0111111111000 1111222222222 2345
Q ss_pred ecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccch-hhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcc
Q 037120 392 LSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIES-LSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNS 470 (489)
Q Consensus 392 ~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg 470 (489)
+|+ +.++++|+.|++|+|||+.++ +.+.. +. +|.+.|++|+|+|++.+|||||.|+
T Consensus 278 Spd-g~~lasgs~D~~V~iwd~~~~----------~~~~~~~~------------gH~~~V~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 278 DMK-GELAVLASNDNSIALVKLKDL----------SMSKIFKQ------------AHSFAITEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp CTT-SCEEEEEETTSCEEEEETTTT----------EEEEEETT------------SSSSCEEEEEECTTSCEEEEEETTS
T ss_pred CCC-CCceEEEcCCCEEEEEECCCC----------cEEEEecC------------cccCCEEEEEECCCCCEEEEEeCCC
Confidence 554 678889999999999999998 76665 45 8999999999999999999999999
Q ss_pred eeEEEecc
Q 037120 471 SLLVVSQK 478 (489)
Q Consensus 471 ~i~v~~~~ 478 (489)
+|+||.-.
T Consensus 335 tvrvw~ip 342 (365)
T 4h5i_A 335 TIHIIKLP 342 (365)
T ss_dssp EEEEEECC
T ss_pred eEEEEEcC
Confidence 99999864
No 41
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=9.4e-32 Score=261.76 Aligned_cols=323 Identities=15% Similarity=0.115 Sum_probs=211.7
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCC----C
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLA----N 167 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~----~ 167 (489)
+..|...|++++|+| ++|++|+.||.|+|||+.+..... .......+.+|... |.+++|+|+ +
T Consensus 12 ~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~--------~~~~~~~~~~h~~~---v~~~~~~~~~~~~g 78 (397)
T 1sq9_A 12 GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNEN--------PKDKSYSHFVHKSG---LHHVDVLQAIERDA 78 (397)
T ss_dssp SSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCC--------GGGGEEEEECCTTC---EEEEEEEEEEETTT
T ss_pred hhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCccccc--------CCCcceEEecCCCc---EEEEEEecccccCC
Confidence 566778899999999 799999999999999998844211 01122223456666 999999998 6
Q ss_pred ---CCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCc-----ccCeeEEEEe----cCCCcE-EEEEeCCC
Q 037120 168 ---QDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDV-----QKGLSDLAFS----AVNTSR-LIASDTHG 234 (489)
Q Consensus 168 ---~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~----~~~~~~-l~s~s~dg 234 (489)
. +|++++.| |.|++||+....... ......+..| ...|.+++|+ |++. . |++++.||
T Consensus 79 ~~~~-~l~s~~~d-g~i~iw~~~~~~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~l~~~~~dg 148 (397)
T 1sq9_A 79 FELC-LVATTSFS-GDLLFYRITREDETK-------KVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS-HRLVATDVKG 148 (397)
T ss_dssp EEEE-EEEEEETT-SCEEEEEEEECTTTC-------CEEEEEECCSCTTGGGSCEEEEEEECCC----C-EEEEEEETTS
T ss_pred cccc-EEEEEcCC-CCEEEEEccCCcccc-------cccceeecccccccCCCcEEEEEEeeccCCCCc-eEEEEEeCCC
Confidence 5 77888877 999999995443211 0011223556 5899999999 9999 8 99999999
Q ss_pred cEEEEECCC------CCcCcee-----ec-------cCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeec
Q 037120 235 VVNIWDRRV------GVLPSLE-----LS-------TGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHN 296 (489)
Q Consensus 235 ~i~iwd~~~------~~~~~~~-----~~-------~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~ 296 (489)
.|++||+++ ++ .+. .+ ..|...|.+++|+|++ ++++++.||.|++||+++++.+..+..
T Consensus 149 ~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~ 225 (397)
T 1sq9_A 149 TTYIWKFHPFADESNSL--TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFES 225 (397)
T ss_dssp CEEEEEEESSSSHHHHT--TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEEC
T ss_pred cEEEEeCCccccccccc--eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEec
Confidence 999999998 54 232 33 4588999999999999 999999999999999999988888887
Q ss_pred ---C---CccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCC
Q 037120 297 ---H---KEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPP 370 (489)
Q Consensus 297 ---~---~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 370 (489)
| ... |.+++|+|++..++........ ..| .+++...+........+
T Consensus 226 ~~~h~~~~~~----i~~i~~~~~~~~l~~~~~d~~~--g~i----------------------~i~d~~~~~~~~~~~~~ 277 (397)
T 1sq9_A 226 QHSMINNSNS----IRSVKFSPQGSLLAIAHDSNSF--GCI----------------------TLYETEFGERIGSLSVP 277 (397)
T ss_dssp CC---CCCCC----EEEEEECSSTTEEEEEEEETTE--EEE----------------------EEEETTTCCEEEEECBC
T ss_pred cccccccCCc----cceEEECCCCCEEEEEecCCCC--ceE----------------------EEEECCCCcccceeccC
Confidence 7 655 8888888887766542211000 001 11121111111100000
Q ss_pred CC-CcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhh---------hcc
Q 037120 371 PA-WLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTK---------LKK 440 (489)
Q Consensus 371 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 440 (489)
.. -............+..++|+|++ .++++|+.|+.|+|||+.++ +.+..+..... ...
T Consensus 278 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~----------~~~~~~~~~~~~~~~~~~~~~g~ 346 (397)
T 1sq9_A 278 THSSQASLGEFAHSSWVMSLSFNDSG-ETLCSAGWDGKLRFWDVKTK----------ERITTLNMHCDDIEIEEDILAVD 346 (397)
T ss_dssp --------CCBSBSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTT----------EEEEEEECCGGGCSSGGGCCCBC
T ss_pred cccccccccccccCCcEEEEEECCCC-CEEEEEeCCCeEEEEEcCCC----------ceeEEEecccCcccchhhhhccc
Confidence 00 00000000001123345676664 57788899999999999887 44443320000 000
Q ss_pred cCCcccCCCceEEEEeeCCC----------CeEEeccCcceeEEEeccc
Q 037120 441 ENRFVPLSEGVTACVTHPLN----------NTIVAGTKNSSLLVVSQKQ 479 (489)
Q Consensus 441 ~~~~~~h~~~V~~va~~p~~----------~~i~sgs~dg~i~v~~~~~ 479 (489)
.-....|...|++++|+|++ .+|++|+.||.|.||..+.
T Consensus 347 ~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 347 EHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp TTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred cccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 00011348999999999998 7999999999999997653
No 42
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.2e-31 Score=256.96 Aligned_cols=308 Identities=11% Similarity=0.112 Sum_probs=205.3
Q ss_pred cccCCCceeEEEECCCCc-EEEEEec---CCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCC
Q 037120 92 RSFGKPGISALDFDCKGI-YLVSATR---SGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLAN 167 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~-~la~g~~---dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~ 167 (489)
+..|...|.+++|+|++. ++++|+. ||.|+|||+.+...... ....|... |.+++|+|++
T Consensus 14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~-------------~~~~~~~~---v~~~~~~~~~ 77 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLL-------------REIEKAKP---IKCGTFGATS 77 (357)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEE-------------EEEEESSC---EEEEECTTCC
T ss_pred ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccce-------------eeecccCc---EEEEEEcCCC
Confidence 445777899999999995 5556766 99999999987443321 11245555 9999999984
Q ss_pred --CCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEE------ecCCCcEEEEEeCCCcEEEE
Q 037120 168 --QDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAF------SAVNTSRLIASDTHGVVNIW 239 (489)
Q Consensus 168 --~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~------~~~~~~~l~s~s~dg~i~iw 239 (489)
..+|++++.| |.|++||+..... .... +.+|...|.+++| +|+++ +|++++.||.|++|
T Consensus 78 ~~~~~l~~~~~d-g~i~iwd~~~~~~-------~~~~----~~~~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~vw 144 (357)
T 3i2n_A 78 LQQRYLATGDFG-GNLHIWNLEAPEM-------PVYS----VKGHKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVKVW 144 (357)
T ss_dssp TTTCCEEEEETT-SCEEEECTTSCSS-------CSEE----ECCCSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEEEE
T ss_pred CCCceEEEecCC-CeEEEEeCCCCCc-------cEEE----EEecccceEEEeeccccccCCCcc-EEEEEeCCCeEEEE
Confidence 3588888888 9999999954321 1222 3789999999965 57888 99999999999999
Q ss_pred ECCCCCcCceeeccCCC----CceeEEE----EeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeC
Q 037120 240 DRRVGVLPSLELSTGSH----GTLNSIQ----LHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLA 311 (489)
Q Consensus 240 d~~~~~~~~~~~~~~h~----~~v~~~~----~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~ 311 (489)
|+++++.+ +..+..|. ..+.+++ |+|+++++++++.||.|++||+++++.... ..|... |.+++|+
T Consensus 145 d~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~----v~~~~~~ 218 (357)
T 3i2n_A 145 DPRQKDDP-VANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNG----VCSLEFD 218 (357)
T ss_dssp CTTSCSSC-SEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSC----EEEEEES
T ss_pred eCCCCCCc-ceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCc----eEEEEcC
Confidence 99987533 23333333 3788998 788999999999999999999998875333 445544 7777777
Q ss_pred C---CCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCc
Q 037120 312 S---MLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRK 388 (489)
Q Consensus 312 ~---~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (489)
| ++..++ +++.++. ..+++...+......... .+.. ....+..
T Consensus 219 ~~~~~~~~l~--------------------------~~~~dg~-i~i~d~~~~~~~~~~~~~-~~~~------~~~~v~~ 264 (357)
T 3i2n_A 219 RKDISMNKLV--------------------------ATSLEGK-FHVFDMRTQHPTKGFASV-SEKA------HKSTVWQ 264 (357)
T ss_dssp CSSSSCCEEE--------------------------EEESTTE-EEEEEEEEEETTTEEEEE-EEEC------CSSCEEE
T ss_pred CCCCCCCEEE--------------------------EECCCCe-EEEEeCcCCCcccceeee-ccCC------CcCCEEE
Confidence 7 554443 3222221 112222221111100000 0000 0122344
Q ss_pred ceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeec---------cCcccchhhHhhhhcccCCcccCCCceEEEEeeCC
Q 037120 389 PSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVD---------YNEDIESLSERTKLKKENRFVPLSEGVTACVTHPL 459 (489)
Q Consensus 389 ~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~ 459 (489)
+.|+|++..++++|+.|+.|++||+........... ..+.+..+ .+|.+.|++++|+|+
T Consensus 265 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------------~~~~~~v~~~~~s~~ 332 (357)
T 3i2n_A 265 VRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNV------------TLSTQPISSLDWSPD 332 (357)
T ss_dssp EEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEE------------ECCSSCEEEEEECSS
T ss_pred EEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecc------------ccCCCCeeEEEEcCC
Confidence 678888777999999999999999987621100000 00112223 389999999999999
Q ss_pred CCeEE-eccCcceeEEEecccc
Q 037120 460 NNTIV-AGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 460 ~~~i~-sgs~dg~i~v~~~~~~ 480 (489)
+..|+ +|+.||.|.||..++.
T Consensus 333 ~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 333 KRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp STTEEEEEETTSEEEEEEECC-
T ss_pred CCeEEEEecCCCcEEEEECCCc
Confidence 99888 8999999999987654
No 43
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=8.2e-32 Score=265.24 Aligned_cols=284 Identities=14% Similarity=0.157 Sum_probs=206.1
Q ss_pred cccCCCceeEEEECCC-CcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 92 RSFGKPGISALDFDCK-GIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~-g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
...+...|++++|+|+ +.+||+|+.||.|+|||+......... .+.......+.+|... |.+++|+|++..+
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~----~~~~~~~~~~~~h~~~---v~~l~~~~~~~~~ 196 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEP----SGECQPDLRLRGHQKE---GYGLSWNPNLNGY 196 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCT----TCCCCCSEEEECCSSC---CCCEEECTTSTTE
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCc----cccCCCcEEecCCCCC---eEEEEeCCCCCCe
Confidence 3445677999999997 789999999999999999763211100 0112333344567777 7889999998778
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCc-Cce
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVL-PSL 249 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~-~~~ 249 (489)
|++++.| |+|++||+...... ...+..... +.+|...|.+++|+|++..+|++++.||.|++||++++.. ..+
T Consensus 197 l~s~~~d-g~i~vwd~~~~~~~-~~~~~~~~~----~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~ 270 (430)
T 2xyi_A 197 LLSASDD-HTICLWDINATPKE-HRVIDAKNI----FTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPS 270 (430)
T ss_dssp EEEECTT-SCEEEEETTSCCBG-GGEEECSEE----ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCS
T ss_pred EEEEeCC-CeEEEEeCCCCCCC-Cceecccee----ecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcce
Confidence 9999988 99999999643211 122222232 3789999999999996665999999999999999998631 244
Q ss_pred eeccCCCCceeEEEEeecCC-EEEEEeCCCeEEEEEcCCC-cccceeecCCccCCCCeeEEEeCCCCcceeeccccceee
Q 037120 250 ELSTGSHGTLNSIQLHAENQ-IIFAAGKHGSIYLWDLRGG-RTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIV 327 (489)
Q Consensus 250 ~~~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~lwd~~~~-~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~ 327 (489)
..+..|...|++++|+|+++ ++++|+.||.|++||+++. ..+..+..|... |++++|+|++
T Consensus 271 ~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~----v~~i~~sp~~------------- 333 (430)
T 2xyi_A 271 HTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE----IFQVQWSPHN------------- 333 (430)
T ss_dssp EEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSC----EEEEEECSSC-------------
T ss_pred eEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCC----EEEEEECCCC-------------
Confidence 45568999999999999998 5778888999999999984 446777777655 6666655542
Q ss_pred ccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCc
Q 037120 328 SQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHG 407 (489)
Q Consensus 328 ~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~ 407 (489)
..++++|+.|+.
T Consensus 334 --------------------------------------------------------------------~~~l~s~~~d~~ 345 (430)
T 2xyi_A 334 --------------------------------------------------------------------ETILASSGTDRR 345 (430)
T ss_dssp --------------------------------------------------------------------TTEEEEEETTSC
T ss_pred --------------------------------------------------------------------CCEEEEEeCCCc
Confidence 335667889999
Q ss_pred EEEEeccCCCCCCeeeccCcccchhhHhhhh--cccCCcccCCCceEEEEeeCCCC-eEEeccCcceeEEEeccccccc
Q 037120 408 IHLLDFFPGSSSPSHVDYNEDIESLSERTKL--KKENRFVPLSEGVTACVTHPLNN-TIVAGTKNSSLLVVSQKQQCTS 483 (489)
Q Consensus 408 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~V~~va~~p~~~-~i~sgs~dg~i~v~~~~~~~~~ 483 (489)
|+|||+... ............ .....+.+|.+.|++++|+|+++ +|++++.||.|.||........
T Consensus 346 i~iwd~~~~----------~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~~~ 414 (430)
T 2xyi_A 346 LHVWDLSKI----------GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYN 414 (430)
T ss_dssp CEEEEGGGT----------TCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHHHC
T ss_pred EEEEeCCCC----------ccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccccc
Confidence 999999874 111110000000 00111238999999999999999 9999999999999987665544
No 44
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.9e-31 Score=251.82 Aligned_cols=189 Identities=14% Similarity=0.175 Sum_probs=157.3
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
+..|...|.+++|+|+|++|++|+.|++|+|||+.+.+... .+.+|... |.+++|+|++. ++
T Consensus 61 ~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~--------------~~~~h~~~---v~~~~~~~~~~-~l 122 (319)
T 3frx_A 61 FKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQ--------------RFVGHKSD---VMSVDIDKKAS-MI 122 (319)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE--------------EEECCSSC---EEEEEECTTSC-EE
T ss_pred EeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeE--------------EEccCCCc---EEEEEEcCCCC-EE
Confidence 56677889999999999999999999999999998854433 23556666 99999999985 88
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCC-----cEEEEEeCCCcEEEEECCCCCc
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNT-----SRLIASDTHGVVNIWDRRVGVL 246 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-----~~l~s~s~dg~i~iwd~~~~~~ 246 (489)
++++.| ++|++||++. . ....+.+|...|.+++|.|... ..|++++.|+.|++||+++.+
T Consensus 123 ~s~s~D-~~i~vwd~~~------~-------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~- 187 (319)
T 3frx_A 123 ISGSRD-KTIKVWTIKG------Q-------CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ- 187 (319)
T ss_dssp EEEETT-SCEEEEETTS------C-------EEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE-
T ss_pred EEEeCC-CeEEEEECCC------C-------eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch-
Confidence 889888 9999999931 1 1223478999999999998532 279999999999999999865
Q ss_pred CceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceee
Q 037120 247 PSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGT 319 (489)
Q Consensus 247 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~ 319 (489)
....+.+|...|++++|+|++++|++++.||+|++||+++++.+..+..+ .. |.+++|+|++..++.
T Consensus 188 -~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~----v~~~~~sp~~~~la~ 254 (319)
T 3frx_A 188 -IEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DE----VFSLAFSPNRYWLAA 254 (319)
T ss_dssp -EEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SC----EEEEEECSSSSEEEE
T ss_pred -hheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-Cc----EEEEEEcCCCCEEEE
Confidence 55567799999999999999999999999999999999999888777753 34 889999998877754
No 45
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.2e-33 Score=267.85 Aligned_cols=264 Identities=12% Similarity=0.090 Sum_probs=184.0
Q ss_pred cCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEE
Q 037120 94 FGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVAC 173 (489)
Q Consensus 94 ~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s 173 (489)
.+...|++++|+|+|++||+|+.||.|+|||+.+... .....+.+|... |.+++|+|++. +|++
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~------------~~~~~~~~h~~~---v~~~~~s~~~~-~l~s 72 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGW------------KHARTFSDHDKI---VTCVDWAPKSN-RIVT 72 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEE------------EECCCBCCCSSC---EEEEEECTTTC-CEEE
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCce------------EEEEEEecCCce---EEEEEEeCCCC-EEEE
Confidence 3456799999999999999999999999999987421 111123456655 99999999985 7888
Q ss_pred EecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcC-ceeec
Q 037120 174 ASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLP-SLELS 252 (489)
Q Consensus 174 ~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~ 252 (489)
++.| ++|++||+.... .+.. ...+.+|...|++++|+|++. +|++++.|+.|++||+++++.. +.+.+
T Consensus 73 ~s~d-~~v~vwd~~~~~-----~~~~----~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 141 (377)
T 3dwl_C 73 CSQD-RNAYVYEKRPDG-----TWKQ----TLVLLRLNRAATFVRWSPNED-KFAVGSGARVISVCYFEQENDWWVSKHL 141 (377)
T ss_dssp EETT-SSEEEC-----------CCCC----EEECCCCSSCEEEEECCTTSS-CCEEEESSSCEEECCC-----CCCCEEE
T ss_pred EeCC-CeEEEEEcCCCC-----ceee----eeEecccCCceEEEEECCCCC-EEEEEecCCeEEEEEECCcccceeeeEe
Confidence 8888 999999995432 0111 122377999999999999998 9999999999999999987521 34445
Q ss_pred cC-CCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcce--eeccccceeecc
Q 037120 253 TG-SHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKI--GTLKAQSKIVSQ 329 (489)
Q Consensus 253 ~~-h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i--~~~~~~~~~~~~ 329 (489)
.. |...|.+++|+|+++++++++.||.|++||++........... +.+..+ ....... .+..
T Consensus 142 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~-~~~~ 206 (377)
T 3dwl_C 142 KRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEAS--------------VWGSRLPFNTVCAEY-PSGG 206 (377)
T ss_dssp CSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSC--------------SSCSCCCEEEEEECC-CCSS
T ss_pred ecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCcccc--------------ccccccchhhhhhcc-cCCc
Confidence 55 9999999999999999999999999999999865421111000 000000 0000000 2223
Q ss_pred ceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEE
Q 037120 330 EIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIH 409 (489)
Q Consensus 330 ~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~ 409 (489)
.|.+++|+|+ +.++++|+.|+.|+
T Consensus 207 ~v~~~~~sp~--------------------------------------------------------~~~l~~~~~d~~i~ 230 (377)
T 3dwl_C 207 WVHAVGFSPS--------------------------------------------------------GNALAYAGHDSSVT 230 (377)
T ss_dssp SEEEEEECTT--------------------------------------------------------SSCEEEEETTTEEC
T ss_pred eEEEEEECCC--------------------------------------------------------CCEEEEEeCCCcEE
Confidence 3344444333 44677788999999
Q ss_pred EEeccCCCCCCeeeccCcc----cchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEec
Q 037120 410 LLDFFPGSSSPSHVDYNED----IESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQ 477 (489)
Q Consensus 410 vwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~ 477 (489)
+||+.++ +. +..+. +|...|.+++|+|++.+|++|+.++.+.++..
T Consensus 231 iwd~~~~----------~~~~~~~~~~~------------~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 231 IAYPSAP----------EQPPRALITVK------------LSQLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp -CEECST----------TSCEEECCCEE------------CSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred EEECCCC----------CCcceeeEeec------------CCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 9999988 55 55566 89999999999999999999998887755443
No 46
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=7.5e-31 Score=257.60 Aligned_cols=281 Identities=11% Similarity=0.130 Sum_probs=206.1
Q ss_pred eeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCC
Q 037120 99 ISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRS 178 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~ 178 (489)
++.|+||++ ++||+|. |++|+|||..+++.... ....+|... |++|+|+|++. +|++|+.|
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~------------~~~~~~~~~---V~sv~fspdg~-~lasgs~D- 168 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQL------------LQMEQPGEY---ISSVAWIKEGN-YLAVGTSS- 168 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEE------------EECCSTTCC---EEEEEECTTSS-EEEEEETT-
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEE------------EEecCCCCc---EEEEEECCCCC-EEEEEECC-
Confidence 678999986 4777775 99999999998554431 112234444 99999999986 88888888
Q ss_pred CEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCc
Q 037120 179 NVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGT 258 (489)
Q Consensus 179 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~ 258 (489)
|+|+|||+... .. ...+.+|...+.+++|+ +. +|++|+.|+.+++||.+.... .+..+.+|...
T Consensus 169 g~v~iWd~~~~-----~~-------~~~~~~h~~~v~~~s~~--~~-~l~sgs~d~~i~~~d~~~~~~-~~~~~~~h~~~ 232 (420)
T 4gga_A 169 AEVQLWDVQQQ-----KR-------LRNMTSHSARVGSLSWN--SY-ILSSGSRSGHIHHHDVRVAEH-HVATLSGHSQE 232 (420)
T ss_dssp SCEEEEETTTT-----EE-------EEEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSSC-EEEEEECCSSC
T ss_pred CeEEEEEcCCC-----cE-------EEEEeCCCCceEEEeeC--CC-EEEEEeCCCceeEeeecccce-eeEEecccccc
Confidence 99999999432 21 22237899999998875 55 899999999999999987543 34566799999
Q ss_pred eeEEEEeecCCEEEEEeCCCeEEEEEcCCCcc----cceeecCCccCCCCeeEEEeCCCCcceeeccccceeeccceeEE
Q 037120 259 LNSIQLHAENQIIFAAGKHGSIYLWDLRGGRT----SAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSI 334 (489)
Q Consensus 259 v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~----~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~ 334 (489)
+..+.++|++.++++++.|+.|++||..+++. +.....|... |.+++|+|.+..+....
T Consensus 233 ~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~----V~~~~~~p~~~~~la~~------------- 295 (420)
T 4gga_A 233 VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGA----VKAVAWCPWQSNVLATG------------- 295 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSC----EEEEEECTTCTTEEEEE-------------
T ss_pred eeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCc----eeeeeeCCCcccEEEEE-------------
Confidence 99999999999999999999999999998764 3445556655 88888877664432110
Q ss_pred EeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEe-ecCCCcEEEEec
Q 037120 335 DLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVG-SSSDHGIHLLDF 413 (489)
Q Consensus 335 ~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-gs~d~~i~vwd~ 413 (489)
.+..++-..++++.++........ . ..+....|.+++..++++ |+.|+.|+|||+
T Consensus 296 -----------~gs~D~~I~iwd~~t~~~~~~~~~------~-------~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~ 351 (420)
T 4gga_A 296 -----------GGTSDRHIRIWNVCSGACLSAVDA------H-------SQVCSILWSPHYKELISGHGFAQNQLVIWKY 351 (420)
T ss_dssp -----------ECTTTCEEEEEETTTTEEEEEEEC------S-------SCEEEEEEETTTTEEEEEECTTTCCEEEEET
T ss_pred -----------eecCCCEEEEEeCCccccceeecc------c-------cceeeeeecCCCCeEEEEEecCCCEEEEEEC
Confidence 000111122333333332221111 0 112335677777776654 558999999999
Q ss_pred cCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEec
Q 037120 414 FPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQ 477 (489)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~ 477 (489)
.++ +.+..+. +|.+.|++++|+|++.+|||||.||+|+||.-
T Consensus 352 ~~~----------~~v~~l~------------gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 352 PTM----------AKVAELK------------GHTSRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp TTC----------CEEEEEC------------CCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred CCC----------cEEEEEc------------CCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 998 8888888 99999999999999999999999999999954
No 47
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.4e-31 Score=251.10 Aligned_cols=248 Identities=14% Similarity=0.183 Sum_probs=187.4
Q ss_pred ccCCCCCCceeEEEeeCCC---CCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCc
Q 037120 149 LLHIPLPQQLDAVRWNLAN---QDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTS 225 (489)
Q Consensus 149 ~~h~~~~~~V~~v~~~~~~---~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 225 (489)
.+|... |.+++|+|++ ..+|++|+.| ++|+|||+... .+. ....+.+|...|.+++|++++.
T Consensus 29 ~~H~~~---V~~v~~~~~~~~~~~~l~tgs~D-~~v~vW~~~~~------~~~----~~~~l~gh~~~v~~~~~~~~~~- 93 (321)
T 3ow8_A 29 QAHDDA---IWSVAWGTNKKENSETVVTGSLD-DLVKVWKWRDE------RLD----LQWSLEGHQLGVVSVDISHTLP- 93 (321)
T ss_dssp TSSSSC---EEEEEEC-------CEEEEEETT-SCEEEEEEETT------EEE----EEEEECCCSSCEEEEEECSSSS-
T ss_pred ccCCCc---EEEEEEecCCCCCCCEEEEEcCC-CCEEEEECCCC------Cee----eeeeeccCCCCEEEEEECCCCC-
Confidence 356666 9999999853 3489999998 99999999432 111 1223489999999999999999
Q ss_pred EEEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCe
Q 037120 226 RLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPL 305 (489)
Q Consensus 226 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v 305 (489)
++++++.|++|++||+++++ ++..+..|...+.+++|+|+++++++++.||.|++||+++++....+..+... |
T Consensus 94 ~l~s~s~D~~i~lWd~~~~~--~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~----v 167 (321)
T 3ow8_A 94 IAASSSLDAHIRLWDLENGK--QIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKF----I 167 (321)
T ss_dssp EEEEEETTSEEEEEETTTTE--EEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSC----E
T ss_pred EEEEEeCCCcEEEEECCCCC--EEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCce----E
Confidence 99999999999999999876 56667788889999999999999999999999999999999888778777766 8
Q ss_pred eEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccC
Q 037120 306 TSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLH 385 (489)
Q Consensus 306 ~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (489)
.+++|+|+++++++ ++.++. ..+++..++........ ....
T Consensus 168 ~~~~~spdg~~las--------------------------g~~dg~-i~iwd~~~~~~~~~~~~------------h~~~ 208 (321)
T 3ow8_A 168 LSIAYSPDGKYLAS--------------------------GAIDGI-INIFDIATGKLLHTLEG------------HAMP 208 (321)
T ss_dssp EEEEECTTSSEEEE--------------------------EETTSC-EEEEETTTTEEEEEECC------------CSSC
T ss_pred EEEEECCCCCEEEE--------------------------EcCCCe-EEEEECCCCcEEEEEcc------------cCCc
Confidence 88887777766653 222221 11222222221111000 0012
Q ss_pred CCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEe
Q 037120 386 LRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVA 465 (489)
Q Consensus 386 ~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~s 465 (489)
+..++|+|+ +.++++|+.|+.|+|||+... +....+. +|...|++++|+|++.+|++
T Consensus 209 v~~l~~spd-~~~l~s~s~dg~i~iwd~~~~----------~~~~~~~------------~h~~~v~~~~~sp~~~~l~s 265 (321)
T 3ow8_A 209 IRSLTFSPD-SQLLVTASDDGYIKIYDVQHA----------NLAGTLS------------GHASWVLNVAFCPDDTHFVS 265 (321)
T ss_dssp CCEEEECTT-SCEEEEECTTSCEEEEETTTC----------CEEEEEC------------CCSSCEEEEEECTTSSEEEE
T ss_pred eeEEEEcCC-CCEEEEEcCCCeEEEEECCCc----------ceeEEEc------------CCCCceEEEEECCCCCEEEE
Confidence 234566665 567889999999999999988 6676777 99999999999999999999
Q ss_pred ccCcceeEEEeccc
Q 037120 466 GTKNSSLLVVSQKQ 479 (489)
Q Consensus 466 gs~dg~i~v~~~~~ 479 (489)
|+.||+|+||..+.
T Consensus 266 ~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 266 SSSDKSVKVWDVGT 279 (321)
T ss_dssp EETTSCEEEEETTT
T ss_pred EeCCCcEEEEeCCC
Confidence 99999999998654
No 48
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.7e-30 Score=244.69 Aligned_cols=281 Identities=10% Similarity=0.124 Sum_probs=199.4
Q ss_pred eeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCC
Q 037120 99 ISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRS 178 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~ 178 (489)
.++|+||+++ +||+|. |++|+|||+.++++... .....|... |++++|+|+++ .+++|+.|
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~------------~~~~~~~~~---V~~v~~~~~~~-~l~sgs~D- 88 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQL------------LQMEQPGEY---ISSVAWIKEGN-YLAVGTSS- 88 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEE------------EECCSTTCC---EEEEEECTTSS-EEEEEETT-
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEE------------EEecCCCCe---EEEEEECCCCC-EEEEEECC-
Confidence 5789999987 777764 99999999998554431 112234444 99999999986 88888888
Q ss_pred CEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCc
Q 037120 179 NVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGT 258 (489)
Q Consensus 179 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~ 258 (489)
|+|++||+..+ +. ...+.+|...+.++.+ ++. .+++++.++.+++|+...... .+..+.+|...
T Consensus 89 g~v~iw~~~~~-----~~-------~~~~~~h~~~~~~~~~--~~~-~l~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 152 (318)
T 4ggc_A 89 AEVQLWDVQQQ-----KR-------LRNMTSHSARVGSLSW--NSY-ILSSGSRSGHIHHHDVRVAEH-HVATLSGHSQE 152 (318)
T ss_dssp SEEEEEETTTT-----EE-------EEEEECCSSCEEEEEE--ETT-EEEEEETTSEEEEEETTSSSC-EEEEEECCSSC
T ss_pred CcEEEeecCCc-----ee-------EEEecCccceEEEeec--CCC-EEEEEecCCceEeeecCCCce-eEEEEcCccCc
Confidence 99999999432 22 1223678888877655 456 899999999999999987643 34466799999
Q ss_pred eeEEEEeecCCEEEEEeCCCeEEEEEcCCCccc----ceeecCCccCCCCeeEEEeCCCCcceeeccccceeeccceeEE
Q 037120 259 LNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTS----APFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSI 334 (489)
Q Consensus 259 v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~----~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~ 334 (489)
+.++.++++++++++++.||+|++||+++++.. .....+... |.++.++|++..+......
T Consensus 153 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~~~~~~----------- 217 (318)
T 4ggc_A 153 VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGA----VKAVAWCPWQSNVLATGGG----------- 217 (318)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSC----EEEEEECTTSTTEEEEEEC-----------
T ss_pred eEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCc----eEEEEecCCCCcEEEEEec-----------
Confidence 999999999999999999999999999987652 223344444 7777777766544211000
Q ss_pred EeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEE-eecCCCcEEEEec
Q 037120 335 DLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAV-GSSSDHGIHLLDF 413 (489)
Q Consensus 335 ~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sgs~d~~i~vwd~ 413 (489)
.....+ .+++............ . .......|.+.+..+++ +|+.|+.|+|||+
T Consensus 218 ---~~~~~i----------~lwd~~~~~~~~~~~~------~-------~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~ 271 (318)
T 4ggc_A 218 ---TSDRHI----------RIWNVCSGACLSAVDA------H-------SQVCSILWSPHYKELISGHGFAQNQLVIWKY 271 (318)
T ss_dssp ---TTTCEE----------EEEETTTCCEEEEEEC------S-------SCEEEEEEETTTTEEEEEECTTTCCEEEEET
T ss_pred ---CCCCEE----------EEEecccccccccccc------e-------eeeeeeeecccccceEEEEEcCCCEEEEEEC
Confidence 000011 1222111111110000 0 11223456666666554 4668999999999
Q ss_pred cCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEec
Q 037120 414 FPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQ 477 (489)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~ 477 (489)
.++ +.+..+. +|.+.|++++|+|++.+|||||.||+|+||.-
T Consensus 272 ~~~----------~~~~~l~------------gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 272 PTM----------AKVAELK------------GHTSRVLSLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp TTC----------CEEEEEC------------CCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred CCC----------cEEEEEc------------CCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 999 8888888 99999999999999999999999999999964
No 49
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9e-31 Score=279.40 Aligned_cols=190 Identities=14% Similarity=0.085 Sum_probs=147.5
Q ss_pred cCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEE
Q 037120 94 FGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVAC 173 (489)
Q Consensus 94 ~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s 173 (489)
.+...|++++|+|+|++||+|+.||.|+||+....+.... ..|... |.+++|+| +. +|++
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~---------------~~~~~~---V~~l~fsp-g~-~L~S 74 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIK---------------LEDRSA---IKEMRFVK-GI-YLVV 74 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEE---------------CSSCCC---EEEEEEET-TT-EEEE
T ss_pred CCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEE---------------cCCCCC---EEEEEEcC-CC-EEEE
Confidence 4567799999999999999999999999999876433221 113333 99999999 65 8888
Q ss_pred EecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCce----
Q 037120 174 ASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSL---- 249 (489)
Q Consensus 174 ~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~---- 249 (489)
++.| ++|++||+... ..+.. + . |...|++++|+|++. +|++|+.||.|++||+++++....
T Consensus 75 ~s~D-~~v~lWd~~~~-----~~~~~---~----~-~~~~V~~v~~sp~g~-~l~sgs~dg~V~lwd~~~~~~~~~~i~~ 139 (902)
T 2oaj_A 75 INAK-DTVYVLSLYSQ-----KVLTT---V----F-VPGKITSIDTDASLD-WMLIGLQNGSMIVYDIDRDQLSSFKLDN 139 (902)
T ss_dssp EETT-CEEEEEETTTC-----SEEEE---E----E-CSSCEEEEECCTTCS-EEEEEETTSCEEEEETTTTEEEEEEECC
T ss_pred EECc-CeEEEEECCCC-----cEEEE---E----c-CCCCEEEEEECCCCC-EEEEEcCCCcEEEEECCCCccccceecc
Confidence 8888 99999999432 22111 1 2 557899999999999 999999999999999998652101
Q ss_pred -----eeccCCCCceeEEEEeec-CCEEEEEeCCCeEEEEEcCCCcccceeecCCc--------------cCCCCeeEEE
Q 037120 250 -----ELSTGSHGTLNSIQLHAE-NQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKE--------------VCHLPLTSLK 309 (489)
Q Consensus 250 -----~~~~~h~~~v~~~~~~p~-~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~--------------~~~~~v~~l~ 309 (489)
....+|.+.|.+++|+|+ +..+++|+.||.| +||+++++.+..+..|.. .+..+|++++
T Consensus 140 ~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~ 218 (902)
T 2oaj_A 140 LQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSL 218 (902)
T ss_dssp HHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEE
T ss_pred ccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEE
Confidence 234579999999999996 4688888889999 999999988777765510 0013499999
Q ss_pred eCCCCcceee
Q 037120 310 LASMLEKIGT 319 (489)
Q Consensus 310 ~~~~~~~i~~ 319 (489)
|+|+|..+++
T Consensus 219 fspdg~~las 228 (902)
T 2oaj_A 219 YHPNSLHIIT 228 (902)
T ss_dssp ECTTSSEEEE
T ss_pred EcCCCCEEEE
Confidence 9999988843
No 50
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-32 Score=270.33 Aligned_cols=301 Identities=9% Similarity=0.051 Sum_probs=193.5
Q ss_pred cCCCceeEEEECCC------CcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCC
Q 037120 94 FGKPGISALDFDCK------GIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLAN 167 (489)
Q Consensus 94 ~~~~~V~~~~fs~~------g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~ 167 (489)
.+...|.+++|+|+ +.+||+|+.||+|+|||+.......... .. ...+...+.+|... |++++|++++
T Consensus 205 ~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~-~~--~~~p~~~l~~h~~~---v~sv~~s~~~ 278 (524)
T 2j04_B 205 HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVF-KM--CEKPSLTLSLADSL---ITTFDFLSPT 278 (524)
T ss_dssp ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEE-EC--CCSCSEEECCTTTC---EEEEEESSSS
T ss_pred ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccc-ee--ecCceEEEEcCCCC---EEEEEecCCC
Confidence 34566999999997 5799999999999999998743221000 00 01122234556666 9999999863
Q ss_pred CCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEE--EEecCCCcEEEEEeCCCcEEEEECCCCC
Q 037120 168 QDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDL--AFSAVNTSRLIASDTHGVVNIWDRRVGV 245 (489)
Q Consensus 168 ~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~~~~l~s~s~dg~i~iwd~~~~~ 245 (489)
.|++|+.| |+|++||++.... +.. .+.+|...|++| +|+|++..+|+|++.|++|+|||+++++
T Consensus 279 --~lasgs~D-gtV~lWD~~~~~~-------~~~----~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~ 344 (524)
T 2j04_B 279 --TVVCGFKN-GFVAEFDLTDPEV-------PSF----YDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIA 344 (524)
T ss_dssp --EEEEEETT-SEEEEEETTBCSS-------CSE----EEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHH
T ss_pred --eEEEEeCC-CEEEEEECCCCCC-------ceE----EeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCC
Confidence 78999988 9999999953211 011 237799999999 5677772399999999999999999865
Q ss_pred cCceeeccCCCC--ceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeecccc
Q 037120 246 LPSLELSTGSHG--TLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQ 323 (489)
Q Consensus 246 ~~~~~~~~~h~~--~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~ 323 (489)
+...+.+|.. .|.+++|+|+++.+++++.|++|++||++++.++..+.+|... |++|+|+|++..+++....
T Consensus 345 --~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~----V~sva~Sp~g~~l~Sgs~D 418 (524)
T 2j04_B 345 --TTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETT----ITAIGVSRLHPMVLAGSAD 418 (524)
T ss_dssp --HHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSC----EEEEECCSSCCBCEEEETT
T ss_pred --cccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCc----eEEEEeCCCCCeEEEEECC
Confidence 4444445543 5889999999999999999999999999999888888888877 8888888887766542211
Q ss_pred ceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeec
Q 037120 324 SKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSS 403 (489)
Q Consensus 324 ~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs 403 (489)
..+. +++.... ....+.....+. ....+..++|+|+++.+.+ .
T Consensus 419 gtv~---------------------------lwd~~~~-~~~~~~~~~~~~-------~~~~v~~v~~sp~g~~~~~--~ 461 (524)
T 2j04_B 419 GSLI---------------------------ITNAARR-LLHGIKNSSATQ-------KSLRLWKWDYSIKDDKYRI--D 461 (524)
T ss_dssp TEEE---------------------------CCBSCSS-TTTCC------C-------CCCEEEECBCCSSSCEEEE--C
T ss_pred CEEE---------------------------EEechHh-hccccccCccce-------eeeEEEEeccCCCCCeEEc--c
Confidence 1111 1111000 000000000000 0001122445555553321 1
Q ss_pred CCCcEEEEecc-CCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCC---eEEeccCcceeEEEeccc
Q 037120 404 SDHGIHLLDFF-PGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNN---TIVAGTKNSSLLVVSQKQ 479 (489)
Q Consensus 404 ~d~~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~---~i~sgs~dg~i~v~~~~~ 479 (489)
. .+++|+.. ++ ..+..+. +|...|++|+|+|++. .+|+|+.||.|+||.-..
T Consensus 462 ~--~~~~~~~~~~g----------~~~~~l~------------gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 462 S--SYEVYPLTVND----------VSKAKID------------AHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp C--CCCCCC-----------------------------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred C--CceecccccCC----------cceeeec------------CCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 2 22333332 23 3445556 8999999999999965 999999999999998776
Q ss_pred cc
Q 037120 480 QC 481 (489)
Q Consensus 480 ~~ 481 (489)
+.
T Consensus 518 ~~ 519 (524)
T 2j04_B 518 EH 519 (524)
T ss_dssp C-
T ss_pred cc
Confidence 64
No 51
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=7.2e-31 Score=249.99 Aligned_cols=200 Identities=14% Similarity=0.128 Sum_probs=149.2
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCC-CCCE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLA-NQDE 170 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~-~~~~ 170 (489)
+..|...|++++|+|+|++||+|+.||.|+|||+.+.... ......+.+|... |.+++|+|. ...+
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~----------~~~~~~~~~~~~~---v~~~~~~~~~d~~~ 73 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN----------WELSDSWRAHDSS---IVAIDWASPEYGRI 73 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC----------EEEEEEEECCSSC---EEEEEECCGGGCSE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc----------ceecceeccCCCc---EEEEEEcCCCCCCE
Confidence 4557778999999999999999999999999999863211 1112223456666 999999994 2358
Q ss_pred EEEEecCCCEEEEEEeccCCCCC-ceeeeeceeeeeecCCcccCeeEEEEecC--CCcEEEEEeCCCcEEEEECCCCCcC
Q 037120 171 VACASTRSNVVSIYDIGYISDEP-VEVLKTRRSVTVVGSDVQKGLSDLAFSAV--NTSRLIASDTHGVVNIWDRRVGVLP 247 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~s~dg~i~iwd~~~~~~~ 247 (489)
|++++.| |+|++||+....... ..... ....+.+|...|.+++|+|+ +. +|++++.||.|++||+++++..
T Consensus 74 l~s~~~d-g~v~vwd~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~ 147 (351)
T 3f3f_A 74 IASASYD-KTVKLWEEDPDQEECSGRRWN----KLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDL 147 (351)
T ss_dssp EEEEETT-SCEEEEEECTTSCTTSSCSEE----EEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCT
T ss_pred EEEEcCC-CeEEEEecCCCcccccccCcc----eeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHh
Confidence 8888888 999999996543211 01111 22334789999999999999 87 9999999999999999987532
Q ss_pred -cee----------eccCCCCceeEEEEeec---CCEEEEEeCCCeEEEEEcCCCcc--cceeecCCccCCCCeeEEEeC
Q 037120 248 -SLE----------LSTGSHGTLNSIQLHAE---NQIIFAAGKHGSIYLWDLRGGRT--SAPFHNHKEVCHLPLTSLKLA 311 (489)
Q Consensus 248 -~~~----------~~~~h~~~v~~~~~~p~---~~~l~~~~~dg~i~lwd~~~~~~--~~~~~~~~~~~~~~v~~l~~~ 311 (489)
.+. ....|...+.+++|+|+ +..+++++.|+.+.+|+...++. +..+.+|... |++++|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~----i~~~~~~ 223 (351)
T 3f3f_A 148 RSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSL----IRSISWA 223 (351)
T ss_dssp TCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSC----EEEEEEC
T ss_pred ccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcc----eeEEEEC
Confidence 110 01267889999999997 99999999999998888877654 5566666655 7777766
Q ss_pred CCC
Q 037120 312 SML 314 (489)
Q Consensus 312 ~~~ 314 (489)
|++
T Consensus 224 p~~ 226 (351)
T 3f3f_A 224 PSI 226 (351)
T ss_dssp CCS
T ss_pred CCC
Confidence 654
No 52
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4e-31 Score=252.45 Aligned_cols=278 Identities=12% Similarity=0.100 Sum_probs=187.9
Q ss_pred ccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEE
Q 037120 93 SFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVA 172 (489)
Q Consensus 93 ~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~ 172 (489)
..|...|.+++|+|+|++||+|+.|++|+|||+..... .....+.+|... |.+++|+|++. +|+
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~------------~~~~~~~~h~~~---v~~v~~sp~~~-~l~ 121 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDF------------ECVTTLEGHENE---VKSVAWAPSGN-LLA 121 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-E------------EEEEEECCCSSC---EEEEEECTTSS-EEE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCe------------EEEEEccCCCCC---ceEEEEeCCCC-EEE
Confidence 34667799999999999999999999999999876321 112223556666 99999999985 888
Q ss_pred EEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeec
Q 037120 173 CASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELS 252 (489)
Q Consensus 173 s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 252 (489)
+++.| ++|++||+.... ... ....+.+|...|.+++|+|++. +|++++.|+.|++||.+.++..+...+
T Consensus 122 s~s~D-~~v~iwd~~~~~-----~~~----~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~~w~~~~~~~~~~~~~ 190 (345)
T 3fm0_A 122 TCSRD-KSVWVWEVDEED-----EYE----CVSVLNSHTQDVKHVVWHPSQE-LLASASYDDTVKLYREEEDDWVCCATL 190 (345)
T ss_dssp EEETT-SCEEEEEECTTS-----CEE----EEEEECCCCSCEEEEEECSSSS-CEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred EEECC-CeEEEEECCCCC-----CeE----EEEEecCcCCCeEEEEECCCCC-EEEEEeCCCcEEEEEecCCCEEEEEEe
Confidence 88888 999999995331 111 1223478999999999999999 999999999999999987654455567
Q ss_pred cCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceeecccee
Q 037120 253 TGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIH 332 (489)
Q Consensus 253 ~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~ 332 (489)
.+|...|.+++|+|++++|++++.|++|++||.........+... ...+....+.. ....+...|.
T Consensus 191 ~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~-----------~~~~~~~~~~~---~~~~h~~~v~ 256 (345)
T 3fm0_A 191 EGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACS-----------GSDPSWKCICT---LSGFHSRTIY 256 (345)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC--------------CEEEEEEE---ECSSCSSCEE
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceee-----------ccCCccceeEE---ecCCCCCcEE
Confidence 799999999999999999999999999999997543321111100 00000011111 1112445677
Q ss_pred EEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCC-CCccccccCCCcceeecCCcEEEEeecCCCcEEEE
Q 037120 333 SIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSD-SNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLL 411 (489)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vw 411 (489)
.++|+|++..+++.+.|+. .++++...+..... +.+... .....+...+..++|+|++..++++|+.|+.|++|
T Consensus 257 ~v~~~~~~~~l~s~~~d~~-i~vw~~~~~~~~~~----~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W 331 (345)
T 3fm0_A 257 DIAWCQLTGALATACGDDA-IRVFQEDPNSDPQQ----PTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFW 331 (345)
T ss_dssp EEEECTTTCCEEEEETTSC-EEEEEECTTSCTTS----CCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEE
T ss_pred EEEEecCCCEEEEEeCCCe-EEEEEeCCCCCcce----eeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEE
Confidence 7777777777776665544 22333221110000 000000 00000112345578888888899999999999999
Q ss_pred eccCC
Q 037120 412 DFFPG 416 (489)
Q Consensus 412 d~~~~ 416 (489)
++.+.
T Consensus 332 ~~~~~ 336 (345)
T 3fm0_A 332 KYQRP 336 (345)
T ss_dssp EECC-
T ss_pred EecCC
Confidence 99887
No 53
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-31 Score=245.65 Aligned_cols=284 Identities=12% Similarity=0.151 Sum_probs=207.4
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
+..|...|.+++| +++.+||+|+.||.|+|||+.+..... .+..|... |.+++|+|++. .+
T Consensus 14 l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~--------------~~~~~~~~---v~~~~~~~~~~-~l 74 (313)
T 3odt_A 14 LKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGT--------------VVYTGQGF---LNSVCYDSEKE-LL 74 (313)
T ss_dssp ECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEE--------------EEEECSSC---EEEEEEETTTT-EE
T ss_pred hhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEE--------------EeecCCcc---EEEEEECCCCC-EE
Confidence 5667788999999 999999999999999999997743332 12345444 99999999986 78
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceee
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLEL 251 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 251 (489)
++++.| |.|++|++...... . .. ..+.+|...|.+++| ++. ++++++.|+.|++|| .++ ....
T Consensus 75 ~~~~~d-g~i~~~~~~~~~~~--~---~~----~~~~~~~~~i~~~~~--~~~-~l~~~~~d~~i~~~d--~~~--~~~~ 137 (313)
T 3odt_A 75 LFGGKD-TMINGVPLFATSGE--D---PL----YTLIGHQGNVCSLSF--QDG-VVISGSWDKTAKVWK--EGS--LVYN 137 (313)
T ss_dssp EEEETT-SCEEEEETTCCTTS--C---C-----CEECCCSSCEEEEEE--ETT-EEEEEETTSEEEEEE--TTE--EEEE
T ss_pred EEecCC-CeEEEEEeeecCCC--C---cc----cchhhcccCEEEEEe--cCC-EEEEEeCCCCEEEEc--CCc--EEEe
Confidence 888888 99999999543211 1 11 223779999999999 456 899999999999999 222 4556
Q ss_pred ccCCCCceeEEEEee-cCCEEEEEeCCCeEEEEEcCCCcccceeec-CCccCCCCeeEEEeCCCCcceeeccccceeecc
Q 037120 252 STGSHGTLNSIQLHA-ENQIIFAAGKHGSIYLWDLRGGRTSAPFHN-HKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQ 329 (489)
Q Consensus 252 ~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~ 329 (489)
+..|...+.+++|+| ++.++++++.||.|++||. .+.+..+.. |... +.+++|+|++. +......
T Consensus 138 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~~~~~----i~~~~~~~~~~-~~~~~~d------ 204 (313)
T 3odt_A 138 LQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSGIHNDV----VRHLAVVDDGH-FISCSND------ 204 (313)
T ss_dssp EECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEEECSSCSSC----EEEEEEEETTE-EEEEETT------
T ss_pred cccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEEEeccCccc----EEEEEEcCCCe-EEEccCC------
Confidence 668999999999999 9999999999999999993 344556655 5655 88888888876 3221110
Q ss_pred ceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEE
Q 037120 330 EIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIH 409 (489)
Q Consensus 330 ~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~ 409 (489)
..+..+..... ..+..+.++.. .+..++|+|++ .+++|+.|+.|+
T Consensus 205 -----------g~i~i~d~~~~--~~~~~~~~~~~--------------------~i~~~~~~~~~--~l~~~~~dg~v~ 249 (313)
T 3odt_A 205 -----------GLIKLVDMHTG--DVLRTYEGHES--------------------FVYCIKLLPNG--DIVSCGEDRTVR 249 (313)
T ss_dssp -----------SEEEEEETTTC--CEEEEEECCSS--------------------CEEEEEECTTS--CEEEEETTSEEE
T ss_pred -----------CeEEEEECCch--hhhhhhhcCCc--------------------eEEEEEEecCC--CEEEEecCCEEE
Confidence 11111111110 01111111211 12335666766 477889999999
Q ss_pred EEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEecccccc
Q 037120 410 LLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQKQQCT 482 (489)
Q Consensus 410 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~~~~~~ 482 (489)
+||+.++ +.+..+. .|...|.+++|+|++. +++++.||.|.+|..+....
T Consensus 250 iwd~~~~----------~~~~~~~------------~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 250 IWSKENG----------SLKQVIT------------LPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp EECTTTC----------CEEEEEE------------CSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGC
T ss_pred EEECCCC----------ceeEEEe------------ccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCce
Confidence 9999988 7777777 8999999999999998 66799999999998776543
No 54
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9.2e-32 Score=257.95 Aligned_cols=282 Identities=11% Similarity=0.144 Sum_probs=179.3
Q ss_pred EEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecC----
Q 037120 102 LDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTR---- 177 (489)
Q Consensus 102 ~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d---- 177 (489)
+.+.+++.++.+ +.+.....|++... . ...|... |.+++|+|+|. +|++++.|
T Consensus 11 ~d~g~~~~~~~~-~g~~~~~~w~~p~~------------~------p~~H~~~---V~~v~fSpDG~-~las~s~d~~~~ 67 (357)
T 4g56_B 11 VDLGTENLYFQS-NGSSKGSAWGRPVT------------A------PACMEVQ---IGAVRYRRDGA-LLLAASSLSSRT 67 (357)
T ss_dssp ------------------------------------------------CCCSE---EEEEEECSSSC-EEEEEECSSSSS
T ss_pred CCCCccceEEec-CCCccccccCCCCC------------C------cccccCC---EEEEEECCCCC-EEEEEcCCCCcc
Confidence 345555545444 44667788987541 1 1345555 99999999996 88888863
Q ss_pred -CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCcee--eccC
Q 037120 178 -SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLE--LSTG 254 (489)
Q Consensus 178 -~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~--~~~~ 254 (489)
|++|++|+....... ..+ .....+|...|++++|+|++. +++++.||+|+|||+.+++..... ...+
T Consensus 68 wd~~v~~~~~~~~~~~--~~~------~~~~~~~~~~V~~~~~s~d~~--~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~ 137 (357)
T 4g56_B 68 WGGSIWVFKDPEGAPN--ESL------CTAGVQTEAGVTDVAWVSEKG--ILVASDSGAVELWEILEKESLLVNKFAKYE 137 (357)
T ss_dssp CCEEEEEESSCC---C--GGG------CSEEEECSSCEEEEEEETTTE--EEEEETTSCEEEC--------CCCCEEECC
T ss_pred ccCeEEEEECCCCCcc--eeE------ecccCCCCCCEEEEEEcCCCC--EEEEECCCEEEEeeccccceeEEEeeccCC
Confidence 278999987433211 111 111256888999999999875 667888999999999987633221 2338
Q ss_pred CCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCc-ceeeccccceeeccceeE
Q 037120 255 SHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLE-KIGTLKAQSKIVSQEIHS 333 (489)
Q Consensus 255 h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~i~~~~~~~~~~~~~i~~ 333 (489)
|...|++++|+|++++|++++.||+|++||+++++.+..+.+|... |++++|++++. .+.+
T Consensus 138 h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~----v~~v~~s~~~~~~~~s-------------- 199 (357)
T 4g56_B 138 HDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSE----VNCVAACPGKDTIFLS-------------- 199 (357)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTCSSCEEE--------------
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCC----EEEEEEccCCCceeee--------------
Confidence 9999999999999999999999999999999999999999998877 88888887764 2222
Q ss_pred EEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEec
Q 037120 334 IDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDF 413 (489)
Q Consensus 334 ~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~ 413 (489)
++.++ -..++++..+........ ... ......++|+|+++.++++|+.|+.|++||+
T Consensus 200 ------------~~~dg-~v~~wd~~~~~~~~~~~~----~~~------~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~ 256 (357)
T 4g56_B 200 ------------CGEDG-RILLWDTRKPKPATRIDF----CAS------DTIPTSVTWHPEKDDTFACGDETGNVSLVNI 256 (357)
T ss_dssp ------------EETTS-CEEECCTTSSSCBCBCCC----TTC------CSCEEEEEECTTSTTEEEEEESSSCEEEEES
T ss_pred ------------eccCC-ceEEEECCCCceeeeeee----ccc------cccccchhhhhcccceEEEeecccceeEEEC
Confidence 11111 112233322221111000 000 0123457888988999999999999999999
Q ss_pred cCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCC-CeEEeccCcceeEEEeccc
Q 037120 414 FPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLN-NTIVAGTKNSSLLVVSQKQ 479 (489)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~-~~i~sgs~dg~i~v~~~~~ 479 (489)
.++ +.+..+. +|...|++++|+|++ .+||+|+.||+|+||..+.
T Consensus 257 ~~~----------~~~~~~~------------~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~ 301 (357)
T 4g56_B 257 KNP----------DSAQTSA------------VHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF 301 (357)
T ss_dssp SCG----------GGCEEEC------------CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS
T ss_pred CCC----------cEeEEEe------------ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC
Confidence 988 7777777 899999999999998 5799999999999997654
No 55
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.4e-32 Score=269.00 Aligned_cols=261 Identities=11% Similarity=0.135 Sum_probs=185.2
Q ss_pred CCceeEEEECCCC---------cEEEE-------------------EecCCeEEEEeCCCcccccCCCCCCCCCcccccc
Q 037120 96 KPGISALDFDCKG---------IYLVS-------------------ATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSK 147 (489)
Q Consensus 96 ~~~V~~~~fs~~g---------~~la~-------------------g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~ 147 (489)
...|.+++|+|++ ++||+ |+.|++|+|||+.+..... .....
T Consensus 133 ~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~----------~~~~~ 202 (524)
T 2j04_B 133 GGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHC----------VKVQT 202 (524)
T ss_dssp CC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCE----------EEEEE
T ss_pred CCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCc----------eEEEE
Confidence 3458888888876 66666 4478899999987632211 00011
Q ss_pred cccCCCCCCceeEEEeeCCC-----CCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecC
Q 037120 148 HLLHIPLPQQLDAVRWNLAN-----QDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAV 222 (489)
Q Consensus 148 ~~~h~~~~~~V~~v~~~~~~-----~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 222 (489)
+.+|... |.+++|+|++ ..+|++++.| |+|+|||+..........+. .......+.+|...|++++|+++
T Consensus 203 l~~~~~~---V~~v~wsp~~~~~~~~~~LAs~s~D-gtvrlWd~~~~~~~~~~~~~-~~~p~~~l~~h~~~v~sv~~s~~ 277 (524)
T 2j04_B 203 IVHSFGE---VWDLKWHEGCHAPHLVGCLSFVSQE-GTINFLEIIDNATDVHVFKM-CEKPSLTLSLADSLITTFDFLSP 277 (524)
T ss_dssp EEECCCS---EEEEEECSSCCCSSSSCEEEEEETT-SCEEEEECCCCSSSSSEEEC-CCSCSEEECCTTTCEEEEEESSS
T ss_pred EEecCCc---EEEEEECCCCCCCCCCceEEEEecC-CeEEEEEcCCCcccccccee-ecCceEEEEcCCCCEEEEEecCC
Confidence 2335555 9999999972 2589999988 99999999543211100100 00111234789999999999985
Q ss_pred CCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEE--EEeecC-CEEEEEeCCCeEEEEEcCCCcccceeecCCc
Q 037120 223 NTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSI--QLHAEN-QIIFAAGKHGSIYLWDLRGGRTSAPFHNHKE 299 (489)
Q Consensus 223 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~--~~~p~~-~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~ 299 (489)
. .|++|+.||+|++||++++..+ ...+.+|...|.++ +|+|++ .+|++++.|++|+|||+++++++..+.+|..
T Consensus 278 -~-~lasgs~DgtV~lWD~~~~~~~-~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~ 354 (524)
T 2j04_B 278 -T-TVVCGFKNGFVAEFDLTDPEVP-SFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFR 354 (524)
T ss_dssp -S-EEEEEETTSEEEEEETTBCSSC-SEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECS
T ss_pred -C-eEEEEeCCCEEEEEECCCCCCc-eEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccc
Confidence 4 7999999999999999976433 33566899999999 578887 8899999999999999998776665554431
Q ss_pred cCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCc
Q 037120 300 VCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNN 379 (489)
Q Consensus 300 ~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (489)
. ..|.++ +|+|+
T Consensus 355 ~--~~v~~v--------------------------~fsp~---------------------------------------- 366 (524)
T 2j04_B 355 G--SNLVPV--------------------------VYCPQ---------------------------------------- 366 (524)
T ss_dssp C--CSCCCE--------------------------EEETT----------------------------------------
T ss_pred c--Ccccce--------------------------EeCCC----------------------------------------
Confidence 1 002222 22222
Q ss_pred cccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCC
Q 037120 380 SADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPL 459 (489)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~ 459 (489)
+..+++++.|++|++||+..+ ..+..+. +|.+.|++|+|+|+
T Consensus 367 ----------------~~~l~s~~~d~tv~lwd~~~~----------~~~~~l~------------gH~~~V~sva~Sp~ 408 (524)
T 2j04_B 367 ----------------IYSYIYSDGASSLRAVPSRAA----------FAVHPLV------------SRETTITAIGVSRL 408 (524)
T ss_dssp ----------------TTEEEEECSSSEEEEEETTCT----------TCCEEEE------------ECSSCEEEEECCSS
T ss_pred ----------------cCeEEEeCCCCcEEEEECccc----------ccceeee------------cCCCceEEEEeCCC
Confidence 223667788999999999988 6666666 89999999999999
Q ss_pred CCeEEeccCcceeEEEecccc
Q 037120 460 NNTIVAGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 460 ~~~i~sgs~dg~i~v~~~~~~ 480 (489)
++.|++|+.||+|+||....+
T Consensus 409 g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 409 HPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp CCBCEEEETTTEEECCBSCSS
T ss_pred CCeEEEEECCCEEEEEechHh
Confidence 999999999999999976554
No 56
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.4e-31 Score=260.21 Aligned_cols=263 Identities=13% Similarity=0.130 Sum_probs=177.0
Q ss_pred eeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeC--------CCCCE
Q 037120 99 ISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNL--------ANQDE 170 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~--------~~~~~ 170 (489)
+....+++++.+||+|+.|++|+|||......... .....+.+|... |.+|+|+| ++ .+
T Consensus 92 ~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~---------~~~~~~~gH~~~---v~~v~~~p~~~~~~~~d~-~~ 158 (393)
T 4gq1_A 92 GNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQ---------HVLGGKSGHHNF---VNDIDIADVYSADNRLAE-QV 158 (393)
T ss_dssp -----CCEEEEEEEEEETTSCEEEEEEETTEEEEE---------EEECTTTSCSSC---EEEEEEEEEECTTCSEEE-EE
T ss_pred cceeecCCCCCEEEEEeCCCcEEEEECCCCcccee---------eeecccCCCCCc---eEEEEEccccccccCCCC-CE
Confidence 55566777889999999999999999987543321 111223567777 99999998 44 48
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCce-
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSL- 249 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~- 249 (489)
|++++.| ++|+|||++.. .. ...+.+|...|.+++|+|++.++|++++.|++|++||+++++....
T Consensus 159 las~s~D-~tv~~Wd~~~~-----~~-------~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~ 225 (393)
T 4gq1_A 159 IASVGDD-CTLIIWRLTDE-----GP-------ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEEN 225 (393)
T ss_dssp EEEEETT-SEEEEEEEETT-----EE-------EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-----
T ss_pred EEEEECC-CeEEEEECCCC-----ce-------eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccc
Confidence 9999988 99999999432 11 1112568889999999999876899999999999999988642100
Q ss_pred ----------------------eeccCCCCceeEEEEe-ecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCee
Q 037120 250 ----------------------ELSTGSHGTLNSIQLH-AENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLT 306 (489)
Q Consensus 250 ----------------------~~~~~h~~~v~~~~~~-p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~ 306 (489)
....+|...+.++.|+ |++..+++++.|+++++||+..++....+..|... +.
T Consensus 226 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~----~~ 301 (393)
T 4gq1_A 226 SQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMK----LG 301 (393)
T ss_dssp -----CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------------
T ss_pred cccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCc----cc
Confidence 0123677889999997 79999999999999999999998877777776655 66
Q ss_pred EEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCC
Q 037120 307 SLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHL 386 (489)
Q Consensus 307 ~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (489)
.+.+.|++..+.... + .....+..
T Consensus 302 ~~~~~~~~~~~~~~~--------------------~-------------------------~~~~~~~~----------- 325 (393)
T 4gq1_A 302 PKNLLPNVQGISLFP--------------------S-------------------------LLGACPHP----------- 325 (393)
T ss_dssp --CCSCSEEEECSSC--------------------C-------------------------SSCCEECS-----------
T ss_pred cEEEccccccccccC--------------------c-------------------------ceeEEEcc-----------
Confidence 666665543322100 0 00001111
Q ss_pred CcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEec
Q 037120 387 RKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAG 466 (489)
Q Consensus 387 ~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sg 466 (489)
+.++.++++|+.|+.|+|||+.++ +....+. +|..+|.+++|||++++||++
T Consensus 326 ------~~~~~~~~sgs~Dg~V~lwd~~~~----------~~~~~~~------------~~~~~V~svafspdG~~LA~a 377 (393)
T 4gq1_A 326 ------RYMDYFATAHSQHGLIQLINTYEK----------DSNSIPI------------QLGMPIVDFCWHQDGSHLAIA 377 (393)
T ss_dssp ------SCTTEEEEEETTTTEEEEEETTCT----------TCCEEEE------------ECSSCEEEEEECTTSSEEEEE
T ss_pred ------CCCCEEEEEECCCCEEEEEECCCC----------cEEEEec------------CCCCcEEEEEEcCCCCEEEEE
Confidence 123788999999999999999988 6665555 799999999999999999999
Q ss_pred cCcceeEEE
Q 037120 467 TKNSSLLVV 475 (489)
Q Consensus 467 s~dg~i~v~ 475 (489)
+.+|.+.+.
T Consensus 378 s~~Gv~lvr 386 (393)
T 4gq1_A 378 TEGSVLLTR 386 (393)
T ss_dssp ESSEEEEEE
T ss_pred eCCCeEEEE
Confidence 998876653
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=1.5e-30 Score=253.95 Aligned_cols=283 Identities=11% Similarity=0.141 Sum_probs=205.2
Q ss_pred eeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCC
Q 037120 99 ISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRS 178 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~ 178 (489)
+.+++|++ ..+++++.||.|+|||+.+...... .. ..|... |.+++|+|++. +|++++.|
T Consensus 96 ~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~--------~~-----~~~~~~---v~~v~~s~~~~-~l~~~~~d- 155 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALERNVYVWNADSGSVSAL--------AE-----TDESTY---VASVKWSHDGS-FLSVGLGN- 155 (401)
T ss_dssp CBCEEECT--TSEEEEEETTEEEEEETTTCCEEEE--------EE-----CCTTCC---EEEEEECTTSS-EEEEEETT-
T ss_pred EEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEe--------ee-----cCCCCC---EEEEEECCCCC-EEEEECCC-
Confidence 56677776 4588888999999999988544331 10 114444 99999999875 78888877
Q ss_pred CEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCc
Q 037120 179 NVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGT 258 (489)
Q Consensus 179 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~ 258 (489)
|.|++||+... .. ...+.+|...|.+++|+ +. .|++++.||.|++||++.... ....+.+|...
T Consensus 156 g~i~iwd~~~~-----~~-------~~~~~~~~~~v~~~~~~--~~-~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~ 219 (401)
T 4aez_A 156 GLVDIYDVESQ-----TK-------LRTMAGHQARVGCLSWN--RH-VLSSGSRSGAIHHHDVRIANH-QIGTLQGHSSE 219 (401)
T ss_dssp SCEEEEETTTC-----CE-------EEEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSSC-EEEEEECCSSC
T ss_pred CeEEEEECcCC-----eE-------EEEecCCCCceEEEEEC--CC-EEEEEcCCCCEEEEecccCcc-eeeEEcCCCCC
Confidence 99999999432 11 12236799999999994 45 999999999999999996433 35566789999
Q ss_pred eeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCC
Q 037120 259 LNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDP 338 (489)
Q Consensus 259 v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p 338 (489)
|.+++|+|+++++++++.||.|++||+++++.+..+..|... |.+++|+|++..+...... .
T Consensus 220 v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~----v~~~~~~p~~~~ll~~~~g--------------s 281 (401)
T 4aez_A 220 VCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAA----VKAVAWCPWQSNLLATGGG--------------T 281 (401)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSC----CCEEEECTTSTTEEEEECC--------------T
T ss_pred eeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcce----EEEEEECCCCCCEEEEecC--------------C
Confidence 999999999999999999999999999998888888888766 8899888877544321000 0
Q ss_pred CCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEe-ecCCCcEEEEeccCCC
Q 037120 339 SCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVG-SSSDHGIHLLDFFPGS 417 (489)
Q Consensus 339 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-gs~d~~i~vwd~~~~~ 417 (489)
.+..+ .+++...+........ . ..+..++|+|++..++++ |+.|+.|+|||+.++
T Consensus 282 ~d~~i----------~i~d~~~~~~~~~~~~------~-------~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~- 337 (401)
T 4aez_A 282 MDKQI----------HFWNAATGARVNTVDA------G-------SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS- 337 (401)
T ss_dssp TTCEE----------EEEETTTCCEEEEEEC------S-------SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT-
T ss_pred CCCEE----------EEEECCCCCEEEEEeC------C-------CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc-
Confidence 01111 1222222221111100 0 113446777776666655 668999999999886
Q ss_pred CCCeeeccCcccch--hhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEecccc
Q 037120 418 SSPSHVDYNEDIES--LSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 418 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~~~~ 480 (489)
+.... +. +|.+.|++++|+|++.+|++|+.||.|.||..+..
T Consensus 338 ---------~~~~~~~~~------------~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 338 ---------GLTKQVDIP------------AHDTRVLYSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp ---------EEEEEEEEE------------CCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred ---------cceeEEEec------------CCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 33333 34 89999999999999999999999999999976543
No 58
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.98 E-value=7.8e-31 Score=248.82 Aligned_cols=173 Identities=14% Similarity=0.172 Sum_probs=132.7
Q ss_pred CCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEE
Q 037120 95 GKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACA 174 (489)
Q Consensus 95 ~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~ 174 (489)
|...|.+++|+|++++||+|+.|++|+|||+........ .......+.+|... |.+++|+|++. +|+++
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~-------~~~~~~~~~~h~~~---V~~v~~sp~g~-~las~ 125 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTF-------EMDLLAIIEGHENE---VKGVAWSNDGY-YLATC 125 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------C-------CCEEEEEEC----C---EEEEEECTTSC-EEEEE
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccc-------cceeEEEEcCCCCc---EEEEEECCCCC-EEEEE
Confidence 667799999999999999999999999999864211000 01112234567766 99999999985 88888
Q ss_pred ecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccC
Q 037120 175 STRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTG 254 (489)
Q Consensus 175 ~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 254 (489)
+.| ++|++||++..... .. ....+.+|...|++++|+|++. +|++++.|++|++||.+++...++..+.+
T Consensus 126 s~D-~~v~iwd~~~~~~~----~~----~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~~ 195 (330)
T 2hes_X 126 SRD-KSVWIWETDESGEE----YE----CISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDDWECVAVLNG 195 (330)
T ss_dssp ETT-SCEEEEECCTTCCC----CE----EEEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTEEEEEEEECC
T ss_pred eCC-CEEEEEeccCCCCC----eE----EEEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCCeeEEEEccC
Confidence 888 99999999432111 11 1223478999999999999998 99999999999999998764336667789
Q ss_pred CCCceeEEEEeec--CCEEEEEeCCCeEEEEEcCCC
Q 037120 255 SHGTLNSIQLHAE--NQIIFAAGKHGSIYLWDLRGG 288 (489)
Q Consensus 255 h~~~v~~~~~~p~--~~~l~~~~~dg~i~lwd~~~~ 288 (489)
|...|.+++|+|+ +..+++++.|++|++||++++
T Consensus 196 h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 196 HEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp CSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred CCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 9999999999998 678999999999999999764
No 59
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.98 E-value=6.2e-30 Score=263.37 Aligned_cols=317 Identities=14% Similarity=0.145 Sum_probs=222.4
Q ss_pred cccCCCceeEEEECCCCc-EEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCC-CCC
Q 037120 92 RSFGKPGISALDFDCKGI-YLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLA-NQD 169 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~-~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~-~~~ 169 (489)
+..+...|.+++|+|+++ +|++|+.||.|++||+.+.+... .+.+|......|.+++|+|+ +.
T Consensus 156 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~--------------~~~~~~~~~~~v~~~~~~~~~~~- 220 (615)
T 1pgu_A 156 VSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA--------------SDRTHHKQGSFVRDVEFSPDSGE- 220 (615)
T ss_dssp CCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEE--------------EECSSSCTTCCEEEEEECSTTCC-
T ss_pred eecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceee--------------eecccCCCCceEEEEEECCCCCC-
Confidence 445667799999999998 89999999999999988754433 12345551123999999999 64
Q ss_pred EEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecC---CcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCc
Q 037120 170 EVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGS---DVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVL 246 (489)
Q Consensus 170 ~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~ 246 (489)
.+++++.| |.|++||+... ..+.... . +|...|.+++|+ ++. +|++++.|+.|++||+++++
T Consensus 221 ~l~~~~~d-g~i~vwd~~~~-----~~~~~~~------~~~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~~wd~~~~~- 285 (615)
T 1pgu_A 221 FVITVGSD-RKISCFDGKSG-----EFLKYIE------DDQEPVQGGIFALSWL-DSQ-KFATVGADATIRVWDVTTSK- 285 (615)
T ss_dssp EEEEEETT-CCEEEEETTTC-----CEEEECC------BTTBCCCSCEEEEEES-SSS-EEEEEETTSEEEEEETTTTE-
T ss_pred EEEEEeCC-CeEEEEECCCC-----CEeEEec------ccccccCCceEEEEEc-CCC-EEEEEcCCCcEEEEECCCCc-
Confidence 88888888 99999999432 2211110 3 789999999999 888 99999999999999999876
Q ss_pred CceeeccCC----CCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCC---------
Q 037120 247 PSLELSTGS----HGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASM--------- 313 (489)
Q Consensus 247 ~~~~~~~~h----~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--------- 313 (489)
.+..+..+ ...+.++.|. ++.++++++.||.|++||+++++.+..+.+|... |++++| |+
T Consensus 286 -~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~----v~~~~~-~~l~~~~~dg~ 358 (615)
T 1pgu_A 286 -CVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKG----ITALTV-NPLISGSYDGR 358 (615)
T ss_dssp -EEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSC----EEEEET-TTTEEEETTSC
T ss_pred -EEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCC----EEEEEe-cCcEEECCCCe
Confidence 44444444 4678888885 8999999999999999999988777777766544 555544 32
Q ss_pred ------------------------Ccceeecc------------------------------------------------
Q 037120 314 ------------------------LEKIGTLK------------------------------------------------ 321 (489)
Q Consensus 314 ------------------------~~~i~~~~------------------------------------------------ 321 (489)
+..+.+..
T Consensus 359 i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 438 (615)
T 1pgu_A 359 IMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGD 438 (615)
T ss_dssp EEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCc
Confidence 22221100
Q ss_pred -------------------------------------------ccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEe
Q 037120 322 -------------------------------------------AQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDV 358 (489)
Q Consensus 322 -------------------------------------------~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~ 358 (489)
.....+...|..++|+|++.++++++.++. ..+++.
T Consensus 439 ~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~-i~iw~~ 517 (615)
T 1pgu_A 439 IIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGK-ILLYDL 517 (615)
T ss_dssp EEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSC-EEEEET
T ss_pred eeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCe-EEEeeC
Confidence 001112345666777777766666655443 223333
Q ss_pred eccceeeecCCCCCCcCCCCccccccCCCcceeecC---------CcEEEEeecCCCcEEEEeccCCCCCCeeeccCccc
Q 037120 359 YNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLST---------NSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDI 429 (489)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~ 429 (489)
..+........ .....+..++|+|. .+.++++|+.|+.|++||+.++. +.+
T Consensus 518 ~~~~~~~~~~~-----------~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---------~~~ 577 (615)
T 1pgu_A 518 QSREVKTSRWA-----------FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM---------KII 577 (615)
T ss_dssp TTTEEEECCSC-----------CCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT---------CCE
T ss_pred CCCcceeEeec-----------CCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc---------eec
Confidence 33322211000 01123445677772 46788899999999999998751 344
Q ss_pred chhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEeccc
Q 037120 430 ESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQKQ 479 (489)
Q Consensus 430 ~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~~~ 479 (489)
..+. +|.+.|++++|+|++. |++++.||.|.||.-+.
T Consensus 578 ~~~~------------~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 578 KALN------------AHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp EETT------------SSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred hhhh------------cCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 4555 8999999999999999 99999999999998653
No 60
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.98 E-value=1.4e-30 Score=248.23 Aligned_cols=193 Identities=13% Similarity=0.199 Sum_probs=151.9
Q ss_pred ccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEE
Q 037120 93 SFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVA 172 (489)
Q Consensus 93 ~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~ 172 (489)
..+...|.+++|+|+|++||+|+.|+.|++|++.+.... ......+.+|... |.++.|++++ .++
T Consensus 94 ~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~----------~~~~~~~~~h~~~---v~~~~~~~~~--~l~ 158 (340)
T 1got_B 94 PLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN----------VRVSRELAGHTGY---LSCCRFLDDN--QIV 158 (340)
T ss_dssp ECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBS----------CEEEEEEECCSSC---EEEEEEEETT--EEE
T ss_pred ecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCc----------ceeEEEecCCCcc---EEEEEECCCC--cEE
Confidence 445567999999999999999999999999999863211 1112233557666 9999999886 477
Q ss_pred EEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeec
Q 037120 173 CASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELS 252 (489)
Q Consensus 173 s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 252 (489)
+++.| ++|++||+... . ....+.+|...|.+++|+|++. +|++|+.|+.|++||++++. +...+
T Consensus 159 s~s~d-~~i~~wd~~~~-----~-------~~~~~~~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~--~~~~~ 222 (340)
T 1got_B 159 TSSGD-TTCALWDIETG-----Q-------QTTTFTGHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGM--CRQTF 222 (340)
T ss_dssp EEETT-SCEEEEETTTT-----E-------EEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCS--EEEEE
T ss_pred EEECC-CcEEEEECCCC-----c-------EEEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCe--eEEEE
Confidence 78877 99999999432 1 1223478999999999999998 99999999999999999876 67778
Q ss_pred cCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCccee
Q 037120 253 TGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIG 318 (489)
Q Consensus 253 ~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~ 318 (489)
.+|...|++++|+|+++++++|+.||+|++||+++++.+..+..+... ..|++++|+|++.+++
T Consensus 223 ~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~--~~v~~~~~s~~g~~l~ 286 (340)
T 1got_B 223 TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNII--CGITSVSFSKSGRLLL 286 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCC--SCEEEEEECTTSSEEE
T ss_pred cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcc--cceEEEEECCCCCEEE
Confidence 899999999999999999999999999999999988766555422211 2266666666665554
No 61
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.98 E-value=3.7e-30 Score=252.50 Aligned_cols=292 Identities=12% Similarity=0.122 Sum_probs=199.4
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
..+....|++++++||+|+.||.|+|||+.+..... .+.+|... |.+++|+|++. +|++++.
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--------------~~~~h~~~---v~~~~~~~~~~-~l~s~s~ 159 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQRE--------------IDQAHVSE---ITKLKFFPSGE-ALISSSQ 159 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEE--------------ETTSSSSC---EEEEEECTTSS-EEEEEET
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceee--------------ecccccCc---cEEEEECCCCC-EEEEEeC
Confidence 335666889999999999999999999998744433 12345555 99999999986 8888888
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeecc---
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELST--- 253 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--- 253 (489)
| ++|++||+.... . .. .+.+|...|.+++|+|++. +|++++.|+.|++||+++++ ++..+.
T Consensus 160 d-~~i~iwd~~~~~-----~---~~----~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~--~~~~~~~~~ 223 (420)
T 3vl1_A 160 D-MQLKIWSVKDGS-----N---PR----TLIGHRATVTDIAIIDRGR-NVLSASLDGTIRLWECGTGT--TIHTFNRKE 223 (420)
T ss_dssp T-SEEEEEETTTCC-----C---CE----EEECCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTTE--EEEEECBTT
T ss_pred C-CeEEEEeCCCCc-----C---ce----EEcCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEeECCCCc--eeEEeecCC
Confidence 8 999999995331 1 12 2367999999999999999 99999999999999999876 443443
Q ss_pred CCCCceeE---------------------EEEeecCCEEEEEeCCCeEEEEEcCCCcccceee-cCCccCCCCeeEEEeC
Q 037120 254 GSHGTLNS---------------------IQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFH-NHKEVCHLPLTSLKLA 311 (489)
Q Consensus 254 ~h~~~v~~---------------------~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~-~~~~~~~~~v~~l~~~ 311 (489)
.|...|.+ ++|+|+++++++++.||.|++||+++++.+..+. .|... |++++|+
T Consensus 224 ~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~----v~~~~~~ 299 (420)
T 3vl1_A 224 NPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCS----CNSLTVD 299 (420)
T ss_dssp BTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSC----EEEEEEC
T ss_pred CCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCC----ceeEEEe
Confidence 33444444 5557889999999999999999999988765554 35545 8888877
Q ss_pred CCCc-ceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccce-eeecCCCCCCcCCCCccccccCCCcc
Q 037120 312 SMLE-KIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRV-SHVHCPPPAWLSDSNNSADQLHLRKP 389 (489)
Q Consensus 312 ~~~~-~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (489)
|++. ++++. +. ++-..++++..+.. ... +.... ...+. .
T Consensus 300 ~~~~~~l~~g--------------------------~~-dg~i~vwd~~~~~~~~~~------~~~~~-----~~~v~-~ 340 (420)
T 3vl1_A 300 GNNANYIYAG--------------------------YE-NGMLAQWDLRSPECPVGE------FLINE-----GTPIN-N 340 (420)
T ss_dssp SSCTTEEEEE--------------------------ET-TSEEEEEETTCTTSCSEE------EEEST-----TSCEE-E
T ss_pred CCCCCEEEEE--------------------------eC-CCeEEEEEcCCCcCchhh------hhccC-----CCCce-E
Confidence 7765 44331 11 11112222222111 000 00000 00011 1
Q ss_pred eeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCC---eEEec
Q 037120 390 SWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNN---TIVAG 466 (489)
Q Consensus 390 ~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~---~i~sg 466 (489)
.+.++ +.++++|+.|+.|++||+... +....+. .......+.+|.+.|.+++|+|++. .+++.
T Consensus 341 ~~~~~-~~~l~s~~~d~~v~iw~~~~~----------~~~~~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~ 406 (420)
T 3vl1_A 341 VYFAA-GALFVSSGFDTSIKLDIISDP----------ESERPAI---EFETPTFLVSNDDAVSQFCYVSDDESNGEVLEV 406 (420)
T ss_dssp EEEET-TEEEEEETTTEEEEEEEECCT----------TCCSCEE---CTTSCEEECCSSCCCCEEEEECCSSSSCEEEEE
T ss_pred EEeCC-CCEEEEecCCccEEEEeccCC----------CCCccce---eccCccEEccCCcceEEEEEccCCCCcceEEEE
Confidence 23333 568899999999999999875 1111100 0000111247999999999999999 78888
Q ss_pred cCcceeEEEeccc
Q 037120 467 TKNSSLLVVSQKQ 479 (489)
Q Consensus 467 s~dg~i~v~~~~~ 479 (489)
|.+|.+.+|..+.
T Consensus 407 g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 407 GKNNFCALYNLSN 419 (420)
T ss_dssp ETTTEEEEEESCC
T ss_pred cCCceEEEEeccC
Confidence 8889999998764
No 62
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.98 E-value=3.6e-30 Score=286.51 Aligned_cols=316 Identities=14% Similarity=0.157 Sum_probs=239.2
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCC-CCE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLAN-QDE 170 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~-~~~ 170 (489)
+..+...|.+++|+|+|++||+|+.||.|+|||+.+..... .+.+|... |.+++|+|++ ..+
T Consensus 653 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~--------------~~~~~~~~---v~~~~~~~~~~~~~ 715 (1249)
T 3sfz_A 653 IKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVH--------------TYDEHSEQ---VNCCHFTNKSNHLL 715 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE--------------EEECCSSC---EEEEEECSSSSCCE
T ss_pred eccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEE--------------EEcCCCCc---EEEEEEecCCCceE
Confidence 45577789999999999999999999999999999854443 12345555 9999999963 347
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcC-c-
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLP-S- 248 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~- 248 (489)
+++++.| +.|++||+..+. ....+.+|...|++++|+|++. .|++++.||.|++||+++++.. .
T Consensus 716 l~sg~~d-~~v~vwd~~~~~------------~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~dg~v~vwd~~~~~~~~~~ 781 (1249)
T 3sfz_A 716 LATGSND-FFLKLWDLNQKE------------CRNTMFGHTNSVNHCRFSPDDE-LLASCSADGTLRLWDVRSANERKSI 781 (1249)
T ss_dssp EEEEETT-SCEEEEETTSSS------------EEEEECCCSSCEEEEEECSSTT-EEEEEESSSEEEEEEGGGTEEEEEE
T ss_pred EEEEeCC-CeEEEEECCCcc------------hhheecCCCCCEEEEEEecCCC-EEEEEECCCeEEEEeCCCCccccee
Confidence 7788887 999999994321 1222378999999999999999 9999999999999998765311 0
Q ss_pred ---------------------------------------------------eeeccCCCCceeEEEEeecCCEEEEEeCC
Q 037120 249 ---------------------------------------------------LELSTGSHGTLNSIQLHAENQIIFAAGKH 277 (489)
Q Consensus 249 ---------------------------------------------------~~~~~~h~~~v~~~~~~p~~~~l~~~~~d 277 (489)
.....+|...|.+++|+|+++++++++.|
T Consensus 782 ~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d 861 (1249)
T 3sfz_A 782 NVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQ 861 (1249)
T ss_dssp ECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSS
T ss_pred cccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCC
Confidence 00112678899999999999999999999
Q ss_pred CeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccce--------------------------------
Q 037120 278 GSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSK-------------------------------- 325 (489)
Q Consensus 278 g~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~-------------------------------- 325 (489)
|.|++||+.++..+..+.+|... |++++|+|++..+.+......
T Consensus 862 g~v~vwd~~~~~~~~~~~~h~~~----v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (1249)
T 3sfz_A 862 YCVELWNIDSRLKVADCRGHLSW----VHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMV 937 (1249)
T ss_dssp SCEEEEETTTTEEEEEECCCSSC----EEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEE
T ss_pred CeEEEEEcCCCceeeecCCCccc----eEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEE
Confidence 99999999999999999999877 999999999987744221110
Q ss_pred ---------------------eeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCcccccc
Q 037120 326 ---------------------IVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQL 384 (489)
Q Consensus 326 ---------------------~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (489)
.....+..++++|++.+++++..++. ..+++...+........ ...
T Consensus 938 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~-i~i~d~~~~~~~~~~~~------------h~~ 1004 (1249)
T 3sfz_A 938 LAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGA-IKIIELPNNRVFSSGVG------------HKK 1004 (1249)
T ss_dssp EEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSC-CEEEETTTTSCEEECCC------------CSS
T ss_pred EEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCC-EEEEEcCCCceeeeccc------------CCC
Confidence 11346888999999998888776654 23444444332221110 012
Q ss_pred CCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEE
Q 037120 385 HLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIV 464 (489)
Q Consensus 385 ~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~ 464 (489)
.+..++|+|++ .++++|+.|+.|++||+.++ +.. .+. +|...|.+++|+|++ .++
T Consensus 1005 ~v~~l~~s~dg-~~l~s~~~dg~i~vwd~~~~----------~~~-~~~------------~~~~~v~~~~~~~~~-~l~ 1059 (1249)
T 3sfz_A 1005 AVRHIQFTADG-KTLISSSEDSVIQVWNWQTG----------DYV-FLQ------------AHQETVKDFRLLQDS-RLL 1059 (1249)
T ss_dssp CCCCEEECSSS-SCEEEECSSSBEEEEETTTT----------EEE-CCB------------CCSSCEEEEEECSSS-EEE
T ss_pred ceEEEEECCCC-CEEEEEcCCCEEEEEECCCC----------ceE-EEe------------cCCCcEEEEEEcCCC-cEE
Confidence 23456777764 56778899999999999987 444 233 799999999999955 578
Q ss_pred eccCcceeEEEecccc
Q 037120 465 AGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 465 sgs~dg~i~v~~~~~~ 480 (489)
+++.||.|.+|.....
T Consensus 1060 ~~~~dg~v~vwd~~~~ 1075 (1249)
T 3sfz_A 1060 SWSFDGTVKVWNVITG 1075 (1249)
T ss_dssp EEESSSEEEEEETTTT
T ss_pred EEECCCcEEEEECCCC
Confidence 9999999999986543
No 63
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=9.7e-31 Score=279.15 Aligned_cols=168 Identities=11% Similarity=0.107 Sum_probs=131.7
Q ss_pred CCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEE
Q 037120 95 GKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACA 174 (489)
Q Consensus 95 ~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~ 174 (489)
+...|.+++|+| |++||+++.|++|+|||+.+.+... .+ .|... |++++|+|++. .+++|
T Consensus 57 ~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~--------~~-------~~~~~---V~~v~~sp~g~-~l~sg 116 (902)
T 2oaj_A 57 DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLT--------TV-------FVPGK---ITSIDTDASLD-WMLIG 116 (902)
T ss_dssp SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEE--------EE-------ECSSC---EEEEECCTTCS-EEEEE
T ss_pred CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEE--------EE-------cCCCC---EEEEEECCCCC-EEEEE
Confidence 456799999999 8899999999999999998854433 11 13333 99999999986 78888
Q ss_pred ecCCCEEEEEEeccCCCCCceeeeecee--ee---eecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCce
Q 037120 175 STRSNVVSIYDIGYISDEPVEVLKTRRS--VT---VVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSL 249 (489)
Q Consensus 175 ~~d~g~i~vwd~~~~~~~~~~~~~~~~~--~~---~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 249 (489)
+.| |+|++||+.... .. .... .. ..+.+|...|++++|+|++...|++|+.||.| +||+++++ ++
T Consensus 117 s~d-g~V~lwd~~~~~-----~~-~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~--~~ 186 (902)
T 2oaj_A 117 LQN-GSMIVYDIDRDQ-----LS-SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENE--IK 186 (902)
T ss_dssp ETT-SCEEEEETTTTE-----EE-EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTE--EE
T ss_pred cCC-CcEEEEECCCCc-----cc-cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCc--eE
Confidence 888 999999995331 11 0000 00 22478999999999999765489999999999 99999865 44
Q ss_pred eeccC------------------CCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccc
Q 037120 250 ELSTG------------------SHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSA 292 (489)
Q Consensus 250 ~~~~~------------------h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~ 292 (489)
+.+.. |...|++++|+|+|.+|++++.||+|++||+++++++.
T Consensus 187 ~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 187 QSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp EEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred EEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence 44433 35789999999999999999999999999999988754
No 64
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.98 E-value=3.6e-30 Score=251.29 Aligned_cols=300 Identities=13% Similarity=0.093 Sum_probs=207.3
Q ss_pred eeEEEECCCCcEE-EEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecC
Q 037120 99 ISALDFDCKGIYL-VSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTR 177 (489)
Q Consensus 99 V~~~~fs~~g~~l-a~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d 177 (489)
...++++|+...+ ++|+.||.|+||++....... .....+.+|... |++++|+|.+..+|++++.|
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~----------~~~~~~~~h~~~---V~~~~~~p~~~~~l~s~s~d 103 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVD----------KNVPLVCGHTAP---VLDIAWCPHNDNVIASGSED 103 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECC----------TTCCCBCCCSSC---EEEEEECTTCTTEEEEEETT
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCC----------CCCceEecCCCC---EEEEEeCCCCCCEEEEEeCC
Confidence 5568899987554 457889999999997632211 111223456666 99999999444589999988
Q ss_pred CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeec--cCC
Q 037120 178 SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELS--TGS 255 (489)
Q Consensus 178 ~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--~~h 255 (489)
|+|++||+....... ........+.+|...|++++|+|++.++|++++.|+.|++||+++++ ++..+ ..|
T Consensus 104 -g~v~vw~~~~~~~~~-----~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~ 175 (402)
T 2aq5_A 104 -CTVMVWEIPDGGLVL-----PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA--AVLTLGPDVH 175 (402)
T ss_dssp -SEEEEEECCTTCCSS-----CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE--EEEEECTTTC
T ss_pred -CeEEEEEccCCCCcc-----ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC--ccEEEecCCC
Confidence 999999995442110 01111223478999999999999985599999999999999999876 55555 689
Q ss_pred CCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCccccee-ecCCccCCCCeeEEEeCCCCcceeeccccceeeccceeEE
Q 037120 256 HGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPF-HNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSI 334 (489)
Q Consensus 256 ~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~ 334 (489)
...|.+++|+|+++++++++.||.|++||+++++.+..+ ..|... .+.++.|+|++..+...
T Consensus 176 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~g-------------- 238 (402)
T 2aq5_A 176 PDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGT---RPVHAVFVSEGKILTTG-------------- 238 (402)
T ss_dssp CSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSS---SCCEEEECSTTEEEEEE--------------
T ss_pred CCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCC---cceEEEEcCCCcEEEEe--------------
Confidence 999999999999999999999999999999999888777 565432 26777777776655431
Q ss_pred EeCCCCCeEEEEEecCCceEEEEeeccce-eeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEec
Q 037120 335 DLDPSCSYQLAFHLDDGWSGVLDVYNSRV-SHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDF 413 (489)
Q Consensus 335 ~~~p~~~~~~~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~ 413 (489)
++. ..++-..+++...+.. ...... ... ..+..++|.|++..++++|+.|+.|++||+
T Consensus 239 -~~~---------~~d~~i~iwd~~~~~~~~~~~~~----~~~-------~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~ 297 (402)
T 2aq5_A 239 -FSR---------MSERQVALWDTKHLEEPLSLQEL----DTS-------SGVLLPFFDPDTNIVYLCGKGDSSIRYFEI 297 (402)
T ss_dssp -ECT---------TCCEEEEEEETTBCSSCSEEEEC----CCC-------SSCEEEEEETTTTEEEEEETTCSCEEEEEE
T ss_pred -ccC---------CCCceEEEEcCccccCCceEEec----cCC-------CceeEEEEcCCCCEEEEEEcCCCeEEEEEe
Confidence 000 0011112233222211 000000 000 123456888888888889999999999999
Q ss_pred cCCCCCCeeeccCcc-cchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEeccc
Q 037120 414 FPGSSSPSHVDYNED-IESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQKQ 479 (489)
Q Consensus 414 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~~~ 479 (489)
.++ +. +..+.. ..|.+.|.+++|+|++..++++ ++.+++|.-..
T Consensus 298 ~~~----------~~~~~~l~~----------~~~~~~v~~~~~sp~~~~~~s~--~~~~~~~~l~~ 342 (402)
T 2aq5_A 298 TSE----------APFLHYLSM----------FSSKESQRGMGYMPKRGLEVNK--CEIARFYKLHE 342 (402)
T ss_dssp CSS----------TTCEEEEEE----------ECCSSCCSEEEECCGGGSCGGG--TEEEEEEEEET
T ss_pred cCC----------CcceEeecc----------cccCCcccceEEecccccceec--ceeEEEEEcCC
Confidence 887 42 333330 0356899999999999988764 55778876544
No 65
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-30 Score=272.70 Aligned_cols=260 Identities=10% Similarity=0.086 Sum_probs=196.8
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCC-CCE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLAN-QDE 170 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~-~~~ 170 (489)
+..|...|++++|+|+|++|++|+.||.|+|||+.... ......+.+|... |++++|+|+. ...
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~------------~~~~~~l~~h~~~---V~~l~~s~~~~~~~ 69 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET------------HKLIDTLTGHEGP---VWRVDWAHPKFGTI 69 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE------------EEEEEEECCCSSC---EEEEEECCTTSCSE
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC------------CccceeccCCcCc---eEEEEecCCCCCCE
Confidence 45677889999999999999999999999999987421 1111223456666 9999999872 348
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecC--CCcEEEEEeCCCcEEEEECCCCCcCc
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAV--NTSRLIASDTHGVVNIWDRRVGVLPS 248 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~s~dg~i~iwd~~~~~~~~ 248 (489)
+++++.| |+|++||+..+. .. ....+.+|...|++++|+|+ +. .+++|+.||.|++||++++....
T Consensus 70 l~s~s~D-g~I~vwd~~~~~------~~----~~~~~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~ 137 (753)
T 3jro_A 70 LASCSYD-GKVLIWKEENGR------WS----QIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTS 137 (753)
T ss_dssp EEEEETT-SCEEEEEEETTE------EE----EEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCC
T ss_pred EEEEeCC-CeEEEEECCCCc------cc----ccccccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcc
Confidence 8888888 999999994321 11 12223779999999999999 77 99999999999999999875443
Q ss_pred eeeccCCCCceeEEEEee-------------cCCEEEEEeCCCeEEEEEcCCCcc----cceeecCCccCCCCeeEEEeC
Q 037120 249 LELSTGSHGTLNSIQLHA-------------ENQIIFAAGKHGSIYLWDLRGGRT----SAPFHNHKEVCHLPLTSLKLA 311 (489)
Q Consensus 249 ~~~~~~h~~~v~~~~~~p-------------~~~~l~~~~~dg~i~lwd~~~~~~----~~~~~~~~~~~~~~v~~l~~~ 311 (489)
.....+|...|.+++|+| ++.++++|+.||.|++||++++.. +..+.+|... |++++|+
T Consensus 138 ~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~----V~~l~~s 213 (753)
T 3jro_A 138 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW----VRDVAWS 213 (753)
T ss_dssp CEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC----EEEEEEC
T ss_pred eeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc----EEEEEec
Confidence 445568999999999999 589999999999999999998642 3444555544 5555544
Q ss_pred CCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCccee
Q 037120 312 SMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSW 391 (489)
Q Consensus 312 ~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (489)
|++ . .
T Consensus 214 p~~--------------------------~----------------------------------~--------------- 218 (753)
T 3jro_A 214 PTV--------------------------L----------------------------------L--------------- 218 (753)
T ss_dssp CCC--------------------------S----------------------------------S---------------
T ss_pred cCC--------------------------C----------------------------------C---------------
Confidence 431 0 0
Q ss_pred ecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcce
Q 037120 392 LSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSS 471 (489)
Q Consensus 392 ~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~ 471 (489)
+.++++|+.|+.|++||+.++.... ........ +|.+.|++++|+|++.+|++|+.||.
T Consensus 219 ----~~~l~s~s~Dg~I~iwd~~~~~~~~-----~~~~~~~~------------~~~~~v~~l~~spdg~~l~s~s~Dg~ 277 (753)
T 3jro_A 219 ----RSYLASVSQDRTCIIWTQDNEQGPW-----KKTLLKEE------------KFPDVLWRASWSLSGNVLALSGGDNK 277 (753)
T ss_dssp ----SEEEEEEESSSCEEEEEESSSSSCC-----BCCBSSSS------------CCSSCCCCEEECTTTCCEEEECSSSC
T ss_pred ----CCEEEEEecCCEEEEecCCCCCCcc-----eeEEeccC------------CCCCceEEEEEcCCCCEEEEEcCCCE
Confidence 5578888999999999998761000 00122222 68999999999999999999999999
Q ss_pred eEEEecc
Q 037120 472 LLVVSQK 478 (489)
Q Consensus 472 i~v~~~~ 478 (489)
|.||...
T Consensus 278 I~vwd~~ 284 (753)
T 3jro_A 278 VTLWKEN 284 (753)
T ss_dssp EECCBCC
T ss_pred EEEEecC
Confidence 9999866
No 66
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=1.3e-30 Score=252.26 Aligned_cols=273 Identities=12% Similarity=0.118 Sum_probs=185.3
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
+..+...|.+++|+|+|++||+|+.|+.|+|||+........ .......+.+|... |.+++|+|++...|
T Consensus 104 ~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~-------~~~~~~~~~gh~~~---v~~~~~~~~~~~~l 173 (380)
T 3iz6_a 104 IKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDG-------NMPVSRVLTGHKGY---ASSCQYVPDQETRL 173 (380)
T ss_dssp EECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCC-------SSTTCCBCCCCSSC---CCCCBCCSSSSSCE
T ss_pred EecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccC-------CccceeeccCCCcc---eEEEEEecCCCCEE
Confidence 455667799999999999999999999999999976322111 11222234567776 77899999877789
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceee
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLEL 251 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 251 (489)
++++.| ++|++||+..+. .+.... .....+|...|.+++|++.+.++|++|+.|++|++||++.... ++..
T Consensus 174 ~s~s~D-~~i~~wd~~~~~-----~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~-~~~~ 244 (380)
T 3iz6_a 174 ITGSGD-QTCVLWDVTTGQ-----RISIFG--SEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR-AVRT 244 (380)
T ss_dssp EEECTT-SCEEEECTTTCC-----EEEEEC--CCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC-CCEE
T ss_pred EEECCC-CcEEEEEcCCCc-----EEEEee--cccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc-ceEE
Confidence 999988 999999995431 111110 0012679999999999884444999999999999999985432 4556
Q ss_pred ccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceeeccce
Q 037120 252 STGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEI 331 (489)
Q Consensus 252 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i 331 (489)
+.+|...|++++|+|+++++++|+.||+|++||+++++.+..+..+.... ......|
T Consensus 245 ~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~-----------------------~~~~~~v 301 (380)
T 3iz6_a 245 YHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRN-----------------------DNELPIV 301 (380)
T ss_dssp ECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSS-----------------------CCSSCSC
T ss_pred ECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccc-----------------------ccccCce
Confidence 77999999999999999999999999999999999988776665433210 0011124
Q ss_pred eEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEE
Q 037120 332 HSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLL 411 (489)
Q Consensus 332 ~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vw 411 (489)
.+++|+|++.+++++..++. ..+++...+........ ... .....+..++|+|+ +.++++|+.|+.|+||
T Consensus 302 ~~~~~s~~g~~l~~g~~dg~-i~vwd~~~~~~~~~~~~--~~~------~h~~~v~~l~~s~d-g~~l~sgs~D~~i~iW 371 (380)
T 3iz6_a 302 TSVAFSISGRLLFAGYSNGD-CYVWDTLLAEMVLNLGT--LQN------SHEGRISCLGLSSD-GSALCTGSWDKNLKIW 371 (380)
T ss_dssp SEEEECSSSSEEEEECTTSC-EEEEETTTCCEEEEECC--SCS------SCCCCCCEEEECSS-SSEEEEECTTSCEEEE
T ss_pred EEEEECCCCCEEEEEECCCC-EEEEECCCCceEEEEec--ccC------CCCCceEEEEECCC-CCEEEEeeCCCCEEEE
Confidence 45555565555555444332 22333332222111000 000 00012334566666 4578899999999999
Q ss_pred eccCC
Q 037120 412 DFFPG 416 (489)
Q Consensus 412 d~~~~ 416 (489)
++...
T Consensus 372 ~~~~~ 376 (380)
T 3iz6_a 372 AFSGH 376 (380)
T ss_dssp ECCSS
T ss_pred ecCCC
Confidence 99765
No 67
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=2.7e-29 Score=248.45 Aligned_cols=309 Identities=14% Similarity=0.135 Sum_probs=221.8
Q ss_pred cccCCCc-eeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 92 RSFGKPG-ISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 92 ~~~~~~~-V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
+..|... +.|+.+ +|++|++|+.||.|+|||+.+.+... .+.+|... |.+++|++ .+
T Consensus 114 l~~h~~~v~~~~~~--~g~~l~sg~~dg~i~vwd~~~~~~~~--------------~~~~h~~~---v~~~~~~~---~~ 171 (445)
T 2ovr_B 114 LKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLR--------------TLVGHTGG---VWSSQMRD---NI 171 (445)
T ss_dssp EECSTTSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEE--------------ECCCCSSC---EEEEEEET---TE
T ss_pred ecccCCCcEEEEEE--cCCEEEEEECCCcEEEEECCCCcEEE--------------EEcCCCCC---EEEEEecC---CE
Confidence 3445555 566554 68999999999999999998854443 12456655 99999984 38
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCcee
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLE 250 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 250 (489)
+++++.| |+|++||+..+ .. ...+.+|...|.+++|+ +. .+++++.||.|++||+++++ ++.
T Consensus 172 l~s~~~d-g~i~vwd~~~~-----~~-------~~~~~~h~~~v~~~~~~--~~-~l~s~s~dg~i~~wd~~~~~--~~~ 233 (445)
T 2ovr_B 172 IISGSTD-RTLKVWNAETG-----EC-------IHTLYGHTSTVRCMHLH--EK-RVVSGSRDATLRVWDIETGQ--CLH 233 (445)
T ss_dssp EEEEETT-SCEEEEETTTT-----EE-------EEEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEESSSCC--EEE
T ss_pred EEEEeCC-CeEEEEECCcC-----cE-------EEEECCCCCcEEEEEec--CC-EEEEEeCCCEEEEEECCCCc--EEE
Confidence 8888888 99999999432 11 22237899999999995 45 89999999999999999877 666
Q ss_pred eccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccc--------
Q 037120 251 LSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKA-------- 322 (489)
Q Consensus 251 ~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~-------- 322 (489)
.+.+|...|.+++| ++.++++++.||.|++||+++++.+..+.+|... |.++.| ++..+.+...
T Consensus 234 ~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----v~~~~~--~~~~l~~~~~d~~i~i~d 305 (445)
T 2ovr_B 234 VLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR----VYSLQF--DGIHVVSGSLDTSIRVWD 305 (445)
T ss_dssp EEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSC----EEEEEE--CSSEEEEEETTSCEEEEE
T ss_pred EEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCc----eEEEEE--CCCEEEEEeCCCeEEEEE
Confidence 77799999999999 7889999999999999999999999999988877 999999 5555532111
Q ss_pred --------cceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecC
Q 037120 323 --------QSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLST 394 (489)
Q Consensus 323 --------~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (489)
....+...+..+.+ ++.++++++.++. ..+++...+............ . ..+..+.|
T Consensus 306 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~--~-------~~v~~~~~--- 370 (445)
T 2ovr_B 306 VETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADST-VKIWDIKTGQCLQTLQGPNKH--Q-------SAVTCLQF--- 370 (445)
T ss_dssp TTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSC-EEEEETTTCCEEEEECSTTSC--S-------SCEEEEEE---
T ss_pred CCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCe-EEEEECCCCcEEEEEccCCCC--C-------CCEEEEEE---
Confidence 11123445556655 4556666655543 345555444333222110000 0 11122233
Q ss_pred CcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcce---
Q 037120 395 NSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSS--- 471 (489)
Q Consensus 395 ~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~--- 471 (489)
.+.++++|+.||.|++||+.++ +.+..+... ...+|.+.|++++|+|++..+|+|+.||+
T Consensus 371 ~~~~l~s~~~dg~v~iwd~~~~----------~~~~~~~~~-------~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~ 433 (445)
T 2ovr_B 371 NKNFVITSSDDGTVKLWDLKTG----------EFIRNLVTL-------ESGGSGGVVWRIRASNTKLVCAVGSRNGTEET 433 (445)
T ss_dssp CSSEEEEEETTSEEEEEETTTC----------CEEEEEEEC-------TTGGGTCEEEEEEECSSEEEEEEECSSSSSCC
T ss_pred CCCEEEEEeCCCeEEEEECCCC----------ceeeeeecc-------ccCCCCceEEEEEecCCEEEEEEcccCCCCcc
Confidence 2568999999999999999988 666554100 00168899999999999999999999998
Q ss_pred -eEEEecccc
Q 037120 472 -LLVVSQKQQ 480 (489)
Q Consensus 472 -i~v~~~~~~ 480 (489)
|.||..+.+
T Consensus 434 ~l~v~df~~~ 443 (445)
T 2ovr_B 434 KLLVLDFDVD 443 (445)
T ss_dssp EEEEEECCCC
T ss_pred EEEEEECCCC
Confidence 999887654
No 68
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=3.9e-29 Score=257.41 Aligned_cols=328 Identities=14% Similarity=0.120 Sum_probs=228.1
Q ss_pred cccCCCceeEEEECCCCcEEEEEecC----CeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCC
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRS----GCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLAN 167 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~d----g~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~ 167 (489)
+..+...|.+++|+|+|++|++++.+ +.|.+||... ... .+.+|... |.+++|+|++
T Consensus 112 ~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~--~~~--------------~~~~~~~~---v~~~~~~~~~ 172 (615)
T 1pgu_A 112 FQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN--SLG--------------EVSGHSQR---INACHLKQSR 172 (615)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC--EEE--------------ECCSCSSC---EEEEEECSSS
T ss_pred hhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCC--cce--------------eeecCCcc---EEEEEECCCC
Confidence 44566779999999999999999988 7888888432 111 12345555 9999999998
Q ss_pred CCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCccc---CeeEEEEecC-CCcEEEEEeCCCcEEEEECCC
Q 037120 168 QDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQK---GLSDLAFSAV-NTSRLIASDTHGVVNIWDRRV 243 (489)
Q Consensus 168 ~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~-~~~~l~s~s~dg~i~iwd~~~ 243 (489)
..++++++.| +.|++||+... .. ...+.+|.. .|++++|+|+ +. +|++++.|+.|++||+++
T Consensus 173 ~~~l~~~~~d-~~v~vwd~~~~-----~~-------~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~ 238 (615)
T 1pgu_A 173 PMRSMTVGDD-GSVVFYQGPPF-----KF-------SASDRTHHKQGSFVRDVEFSPDSGE-FVITVGSDRKISCFDGKS 238 (615)
T ss_dssp SCEEEEEETT-TEEEEEETTTB-----EE-------EEEECSSSCTTCCEEEEEECSTTCC-EEEEEETTCCEEEEETTT
T ss_pred CcEEEEEeCC-CcEEEEeCCCc-----ce-------eeeecccCCCCceEEEEEECCCCCC-EEEEEeCCCeEEEEECCC
Confidence 7789999988 99999998321 11 222377888 9999999999 88 999999999999999998
Q ss_pred CCcCceeec-c---CCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceee
Q 037120 244 GVLPSLELS-T---GSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGT 319 (489)
Q Consensus 244 ~~~~~~~~~-~---~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~ 319 (489)
++ .+..+ . .|...|.+++|+ ++.++++++.||.|++||+++++.+..+..+.......+.++.|. ++..+..
T Consensus 239 ~~--~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 314 (615)
T 1pgu_A 239 GE--FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIIS 314 (615)
T ss_dssp CC--EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEE
T ss_pred CC--EeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEE
Confidence 76 55555 5 899999999999 999999999999999999999998888876632111337888885 5554422
Q ss_pred cc----------------cccee---------------------------------eccceeEEEeCCCCCeEEEEEecC
Q 037120 320 LK----------------AQSKI---------------------------------VSQEIHSIDLDPSCSYQLAFHLDD 350 (489)
Q Consensus 320 ~~----------------~~~~~---------------------------------~~~~i~~~~~~p~~~~~~~~~~~~ 350 (489)
.. ..... +...|.++.+ +++..+++++.++
T Consensus 315 ~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~~d~ 393 (615)
T 1pgu_A 315 LSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSISWDD 393 (615)
T ss_dssp EETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEETTT
T ss_pred EECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEeCCC
Confidence 11 01111 2234455555 3355566555554
Q ss_pred C---ceEE------------------------------EEeeccceeeecC-------C-------------C---CCCc
Q 037120 351 G---WSGV------------------------------LDVYNSRVSHVHC-------P-------------P---PAWL 374 (489)
Q Consensus 351 ~---w~~~------------------------------~~~~~~~~~~~~~-------~-------------~---~~~~ 374 (489)
. |... ++...+....... . . ..|.
T Consensus 394 ~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~ 473 (615)
T 1pgu_A 394 TLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFK 473 (615)
T ss_dssp EEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEE
T ss_pred CEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEE
Confidence 3 3200 0000000000000 0 0 0000
Q ss_pred CCC------CccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCccc-C
Q 037120 375 SDS------NNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVP-L 447 (489)
Q Consensus 375 ~~~------~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h 447 (489)
... ........+..++|+|++ .++++|+.|+.|++||+.++ +.+..+. + |
T Consensus 474 ~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~i~iw~~~~~----------~~~~~~~------------~~h 530 (615)
T 1pgu_A 474 LSDLEVSFDLKTPLRAKPSYISISPSE-TYIAAGDVMGKILLYDLQSR----------EVKTSRW------------AFR 530 (615)
T ss_dssp TTEEEEEEECSSCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTT----------EEEECCS------------CCC
T ss_pred CCCccccccccCCccCceEEEEECCCC-CEEEEcCCCCeEEEeeCCCC----------cceeEee------------cCC
Confidence 000 000111233457788875 57788899999999999988 6766665 6 9
Q ss_pred CCceEEEEeeC----------CCCeEEeccCcceeEEEecccc
Q 037120 448 SEGVTACVTHP----------LNNTIVAGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 448 ~~~V~~va~~p----------~~~~i~sgs~dg~i~v~~~~~~ 480 (489)
...|++++|+| ++.+||+|+.||.|.||..+..
T Consensus 531 ~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 531 TSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP 573 (615)
T ss_dssp SSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCT
T ss_pred CCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCC
Confidence 99999999999 9999999999999999987663
No 69
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=5.6e-30 Score=272.68 Aligned_cols=286 Identities=10% Similarity=0.106 Sum_probs=209.1
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
+..|...|.+++|+|+|++||+|+.||.|+|||+.+..... .+.+|... |.+++|+|++. .|
T Consensus 9 ~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~--------------~~~~~~~~---v~~~~~s~~~~-~l 70 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVR--------------SIQVTETP---VRAGKFIARKN-WI 70 (814)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE--------------EEECCSSC---EEEEEEEGGGT-EE
T ss_pred eecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEE--------------EEecCCCc---EEEEEEeCCCC-EE
Confidence 55677789999999999999999999999999998854433 12345555 99999999986 77
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceee
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLEL 251 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 251 (489)
++++.| |.|++||+..+ . ....+.+|...|++++|+|+++ .|++++.||.|++||++++.. ....
T Consensus 71 ~~~~~d-g~i~vw~~~~~-----~-------~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~~~~-~~~~ 135 (814)
T 3mkq_A 71 IVGSDD-FRIRVFNYNTG-----E-------KVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWA-LEQT 135 (814)
T ss_dssp EEEETT-SEEEEEETTTC-----C-------EEEEEECCSSCEEEEEECSSSS-EEEEEETTSEEEEEEGGGTSE-EEEE
T ss_pred EEEeCC-CeEEEEECCCC-----c-------EEEEEecCCCCEEEEEEeCCCC-EEEEEcCCCEEEEEECCCCce-EEEE
Confidence 888877 99999999432 1 1122367999999999999999 999999999999999987632 4556
Q ss_pred ccCCCCceeEEEEee-cCCEEEEEeCCCeEEEEEcCCCcccceeecCC-ccCCCCeeEEEeCC--CCcceeeccccceee
Q 037120 252 STGSHGTLNSIQLHA-ENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHK-EVCHLPLTSLKLAS--MLEKIGTLKAQSKIV 327 (489)
Q Consensus 252 ~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~--~~~~i~~~~~~~~~~ 327 (489)
+.+|...|.+++|+| ++..+++++.||.|++||+++++....+..+. .. +..++|+| ++..+......
T Consensus 136 ~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~l~~~~~d---- 207 (814)
T 3mkq_A 136 FEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERG----VNYVDYYPLPDKPYMITASDD---- 207 (814)
T ss_dssp EECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTC----CCEEEECCSTTCCEEEEECTT----
T ss_pred EcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCC----EEEEEEEECCCCCEEEEEeCC----
Confidence 678999999999999 88999999999999999999887766666543 44 78888877 55555431111
Q ss_pred ccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCc
Q 037120 328 SQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHG 407 (489)
Q Consensus 328 ~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~ 407 (489)
..+..+..... .......++... +..++|+|++. ++++|+.|+.
T Consensus 208 -------------g~i~~~d~~~~--~~~~~~~~~~~~--------------------v~~~~~~~~~~-~l~~~~~dg~ 251 (814)
T 3mkq_A 208 -------------LTIKIWDYQTK--SCVATLEGHMSN--------------------VSFAVFHPTLP-IIISGSEDGT 251 (814)
T ss_dssp -------------SEEEEEETTTT--EEEEEEECCSSC--------------------EEEEEECSSSS-EEEEEETTSC
T ss_pred -------------CEEEEEECCCC--cEEEEEcCCCCC--------------------EEEEEEcCCCC-EEEEEeCCCe
Confidence 01111111100 111122222111 22345666544 7788899999
Q ss_pred EEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCC--eEEeccCcceeEEEec
Q 037120 408 IHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNN--TIVAGTKNSSLLVVSQ 477 (489)
Q Consensus 408 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~--~i~sgs~dg~i~v~~~ 477 (489)
|++||+.++ +.+..+. .|...|.+++|+|++. .+++++ ++.+.+|..
T Consensus 252 v~vwd~~~~----------~~~~~~~------------~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 300 (814)
T 3mkq_A 252 LKIWNSSTY----------KVEKTLN------------VGLERSWCIATHPTGRKNYIASGF-DNGFTVLSL 300 (814)
T ss_dssp EEEEETTTC----------SEEEEEC------------CSSSSEEEEEECTTCGGGEEEEEE-TTEEEEEEC
T ss_pred EEEEECCCC----------cEEEEee------------cCCCcEEEEEEccCCCceEEEEEe-CCCEEEEEc
Confidence 999999988 7777776 8889999999999987 355555 455555543
No 70
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=1.6e-29 Score=242.18 Aligned_cols=194 Identities=12% Similarity=0.165 Sum_probs=149.2
Q ss_pred cCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEE
Q 037120 94 FGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVAC 173 (489)
Q Consensus 94 ~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s 173 (489)
.+...|.+++|+|+|.+||+|+.|+.+++|++....... .......+.+|... |.+++|+|++. .|++
T Consensus 104 ~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~--------~~~~~~~~~~h~~~---v~~~~~~~~~~-~l~t 171 (354)
T 2pbi_B 104 MPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNEN--------MAAKKKSVAMHTNY---LSACSFTNSDM-QILT 171 (354)
T ss_dssp CSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCC--------SGGGCEEEEECSSC---EEEEEECSSSS-EEEE
T ss_pred cCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccccc--------ccccceeeeccCCc---EEEEEEeCCCC-EEEE
Confidence 344569999999999999999999999999987532111 11222233457776 99999999975 7778
Q ss_pred EecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecC--CCcEEEEEeCCCcEEEEECCCCCcCceee
Q 037120 174 ASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAV--NTSRLIASDTHGVVNIWDRRVGVLPSLEL 251 (489)
Q Consensus 174 ~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 251 (489)
++.| ++|++||+... . ....+.+|...|.+++|+|+ +. +|++|+.||.|++||+++++ ++..
T Consensus 172 ~s~D-~~v~lwd~~~~-----~-------~~~~~~~h~~~v~~~~~~~~~~g~-~l~sgs~Dg~v~~wd~~~~~--~~~~ 235 (354)
T 2pbi_B 172 ASGD-GTCALWDVESG-----Q-------LLQSFHGHGADVLCLDLAPSETGN-TFVSGGCDKKAMVWDMRSGQ--CVQA 235 (354)
T ss_dssp EETT-SEEEEEETTTC-----C-------EEEEEECCSSCEEEEEECCCSSCC-EEEEEETTSCEEEEETTTCC--EEEE
T ss_pred EeCC-CcEEEEeCCCC-----e-------EEEEEcCCCCCeEEEEEEeCCCCC-EEEEEeCCCeEEEEECCCCc--EEEE
Confidence 8888 99999999432 1 12233789999999999885 45 99999999999999999987 7777
Q ss_pred ccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcce
Q 037120 252 STGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKI 317 (489)
Q Consensus 252 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i 317 (489)
+.+|...|++++|+|++.++++++.|++|++||+++++.+..+..+... ..+++++|+|++..+
T Consensus 236 ~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~--~~~~~~~~s~~g~~l 299 (354)
T 2pbi_B 236 FETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESII--FGASSVDFSLSGRLL 299 (354)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCC--SCEEEEEECTTSSEE
T ss_pred ecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcc--cceeEEEEeCCCCEE
Confidence 8899999999999999999999999999999999987765555432211 125555555555444
No 71
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=5.1e-29 Score=236.44 Aligned_cols=273 Identities=13% Similarity=0.135 Sum_probs=201.9
Q ss_pred cCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEE
Q 037120 94 FGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVAC 173 (489)
Q Consensus 94 ~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s 173 (489)
.|...|.+++|+|++++|++++ ||.|+|||+.+...... ........|... |.+++|+|++. .+++
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~---------~~~~~~~~~~~~---v~~~~~~~~~~-~l~~ 114 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSP---------VSQLDCLNRDNY---IRSCKLLPDGC-TLIV 114 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSC---------SEEEECSCTTSB---EEEEEECTTSS-EEEE
T ss_pred cCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceee---------eecccccCCCCc---EEEEEEcCCCC-EEEE
Confidence 4667799999999999999999 99999999987432221 111111134444 99999999985 7777
Q ss_pred EecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeecc
Q 037120 174 ASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELST 253 (489)
Q Consensus 174 ~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 253 (489)
++.| |.|++||+..... . ....+.+|...|.+++|+|+++ +|++++.||.|++||+++++ ....+.
T Consensus 115 ~~~d-~~i~~~d~~~~~~------~----~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~~~d~~~~~--~~~~~~ 180 (337)
T 1gxr_A 115 GGEA-STLSIWDLAAPTP------R----IKAELTSSAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQT--LVRQFQ 180 (337)
T ss_dssp EESS-SEEEEEECCCC--------E----EEEEEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTE--EEEEEC
T ss_pred EcCC-CcEEEEECCCCCc------c----eeeecccCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCc--eeeeee
Confidence 8777 9999999943311 0 1122367888999999999998 99999999999999999876 566677
Q ss_pred CCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccc-----------
Q 037120 254 GSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKA----------- 322 (489)
Q Consensus 254 ~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~----------- 322 (489)
.|...|.+++|+|+++++++++.||.|++||+++++.+..+. +... +.+++|+|++..++....
T Consensus 181 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~----v~~~~~s~~~~~l~~~~~~~~i~~~~~~~ 255 (337)
T 1gxr_A 181 GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQ----IFSLGYCPTGEWLAVGMESSNVEVLHVNK 255 (337)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSC----EEEEEECTTSSEEEEEETTSCEEEEETTS
T ss_pred cccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCc----eEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 899999999999999999999999999999999988776664 4545 999999999988743211
Q ss_pred ----cceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEE
Q 037120 323 ----QSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIY 398 (489)
Q Consensus 323 ----~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (489)
....+...|..+.|+|++.++++.+.++. ..+++...+........ ...+..++|+|++ .+
T Consensus 256 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~~~~~~~~~~~~~~~~-------------~~~v~~~~~s~~~-~~ 320 (337)
T 1gxr_A 256 PDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL-LNAWRTPYGASIFQSKE-------------SSSVLSCDISVDD-KY 320 (337)
T ss_dssp SCEEEECCCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEEC-------------SSCEEEEEECTTS-CE
T ss_pred CCeEEEcCCccceeEEEECCCCCEEEEecCCCc-EEEEECCCCeEEEEecC-------------CCcEEEEEECCCC-CE
Confidence 12234667999999999998887776543 23444443332211100 0122345677764 56
Q ss_pred EEeecCCCcEEEEecc
Q 037120 399 AVGSSSDHGIHLLDFF 414 (489)
Q Consensus 399 l~sgs~d~~i~vwd~~ 414 (489)
+++++.|+.|++||+.
T Consensus 321 l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 321 IVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEEETTSCEEEEEEE
T ss_pred EEEecCCCeEEEEEEe
Confidence 7778899999999974
No 72
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=5e-30 Score=247.86 Aligned_cols=197 Identities=14% Similarity=0.050 Sum_probs=148.9
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
+..+...|.+++|+|++++|++|+.||.|+|||+.+... ......+..|... |.+++|+|++. .|
T Consensus 51 ~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~-----------~~~~~~~~~~~~~---v~~~~~~~~~~-~l 115 (377)
T 3dwl_C 51 FSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT-----------WKQTLVLLRLNRA---ATFVRWSPNED-KF 115 (377)
T ss_dssp BCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C-----------CCCEEECCCCSSC---EEEEECCTTSS-CC
T ss_pred EecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc-----------eeeeeEecccCCc---eEEEEECCCCC-EE
Confidence 556777899999999999999999999999999988440 1112223445555 99999999986 77
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCC-cccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCC-----
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSD-VQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGV----- 245 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~----- 245 (489)
++++.| +.|++||+..... ...... +.+ |...|++++|+|++. +|++++.|+.|++||++..+
T Consensus 116 ~~~~~d-~~i~iwd~~~~~~-----~~~~~~----~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~ 184 (377)
T 3dwl_C 116 AVGSGA-RVISVCYFEQEND-----WWVSKH----LKRPLRSTILSLDWHPNNV-LLAAGCADRKAYVLSAYVRDVDAKP 184 (377)
T ss_dssp EEEESS-SCEEECCC----------CCCCEE----ECSSCCSCEEEEEECTTSS-EEEEEESSSCEEEEEECCSSCC-CC
T ss_pred EEEecC-CeEEEEEECCccc-----ceeeeE----eecccCCCeEEEEEcCCCC-EEEEEeCCCEEEEEEEEecccCCCc
Confidence 777777 9999999954321 001111 244 899999999999998 99999999999999986322
Q ss_pred -----------cCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcc----cceeecCCccCCCCeeEEEe
Q 037120 246 -----------LPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRT----SAPFHNHKEVCHLPLTSLKL 310 (489)
Q Consensus 246 -----------~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~----~~~~~~~~~~~~~~v~~l~~ 310 (489)
..++..+ +|...|.+++|+|++++|++++.||.|++||+++++. +..+..|... |.+++|
T Consensus 185 ~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~----v~~~~~ 259 (377)
T 3dwl_C 185 EASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLP----LRSLLW 259 (377)
T ss_dssp CSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSC----EEEEEE
T ss_pred cccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCc----eEEEEE
Confidence 1134444 8999999999999999999999999999999999987 7888888866 888888
Q ss_pred CCCCcceee
Q 037120 311 ASMLEKIGT 319 (489)
Q Consensus 311 ~~~~~~i~~ 319 (489)
+|++.++++
T Consensus 260 s~~~~~l~~ 268 (377)
T 3dwl_C 260 ANESAIVAA 268 (377)
T ss_dssp EETTEEEEE
T ss_pred cCCCCEEEE
Confidence 888766653
No 73
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=4.7e-29 Score=237.96 Aligned_cols=254 Identities=15% Similarity=0.211 Sum_probs=181.3
Q ss_pred cccCCCCCCceeEEEe-----eC-CCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEec
Q 037120 148 HLLHIPLPQQLDAVRW-----NL-ANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSA 221 (489)
Q Consensus 148 ~~~h~~~~~~V~~v~~-----~~-~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 221 (489)
+.+|... |++++| ++ ++ .+|++|+.| ++|++||+....... . .......+.+|...|++++|+|
T Consensus 17 l~gH~~~---V~~~~~~~s~~~~~d~-~~l~sgs~D-~~v~iWd~~~~~~~~--~---~~~~~~~l~~h~~~V~~~~~~~ 86 (343)
T 2xzm_R 17 LEGHSDW---VTSIVAGFSQKENEDS-PVLISGSRD-KTVMIWKLYEEEQNG--Y---FGIPHKALTGHNHFVSDLALSQ 86 (343)
T ss_dssp EECCSSC---EEEEEECCCSSTTCCC-CEEEEEETT-SCEEEEEECSSCCSS--B---SEEEEEEECCCSSCEEEEEECS
T ss_pred eccchhh---hhheeeEEEeecCCCC-CEEEEEcCC-CEEEEEECCcCCccc--c---cccccchhccCCCceEEEEECC
Confidence 4567776 999999 66 54 589999988 999999995432110 0 1112233588999999999999
Q ss_pred CCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCccc--ceeecCCc
Q 037120 222 VNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTS--APFHNHKE 299 (489)
Q Consensus 222 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~--~~~~~~~~ 299 (489)
++. ++++++.|++|++||+++++ ++..+.+|...|.+++|+|+++++++++.|++|++||++..... .....|..
T Consensus 87 ~~~-~l~s~s~D~~v~lwd~~~~~--~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 163 (343)
T 2xzm_R 87 ENC-FAISSSWDKTLRLWDLRTGT--TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSD 163 (343)
T ss_dssp STT-EEEEEETTSEEEEEETTSSC--EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSS
T ss_pred CCC-EEEEEcCCCcEEEEECCCCc--EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCc
Confidence 999 99999999999999999877 66677899999999999999999999999999999999843221 11225665
Q ss_pred cCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEE-------eeccceeeecCCCCC
Q 037120 300 VCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLD-------VYNSRVSHVHCPPPA 372 (489)
Q Consensus 300 ~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~-------~~~~~~~~~~~~~~~ 372 (489)
. |.+++|+|++.... .+.|.+.++++++.++. ..+++ .+.+|...
T Consensus 164 ~----v~~~~~~~~~~~~~----------------~~~~~~~~l~s~~~d~~-i~iwd~~~~~~~~~~~h~~~------- 215 (343)
T 2xzm_R 164 W----VSCVRYSPIMKSAN----------------KVQPFAPYFASVGWDGR-LKVWNTNFQIRYTFKAHESN------- 215 (343)
T ss_dssp C----EEEEEECCCCCSCS----------------CCCSSCCEEEEEETTSE-EEEEETTTEEEEEEECCSSC-------
T ss_pred e----eeeeeecccccccc----------------ccCCCCCEEEEEcCCCE-EEEEcCCCceeEEEcCcccc-------
Confidence 5 99999999875322 12355556666655543 12232 12222211
Q ss_pred CcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceE
Q 037120 373 WLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVT 452 (489)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 452 (489)
+..++|+|+ +.++++|+.|+.|+|||+.... .....+ .+...|.
T Consensus 216 -------------v~~~~~s~~-g~~l~sgs~dg~v~iwd~~~~~---------~~~~~~-------------~~~~~v~ 259 (343)
T 2xzm_R 216 -------------VNHLSISPN-GKYIATGGKDKKLLIWDILNLT---------YPQREF-------------DAGSTIN 259 (343)
T ss_dssp -------------EEEEEECTT-SSEEEEEETTCEEEEEESSCCS---------SCSEEE-------------ECSSCEE
T ss_pred -------------ceEEEECCC-CCEEEEEcCCCeEEEEECCCCc---------ccceee-------------cCCCcEE
Confidence 233556665 5678899999999999995440 222222 3556799
Q ss_pred EEEeeCCCCeEEeccCcceeEEEeccc
Q 037120 453 ACVTHPLNNTIVAGTKNSSLLVVSQKQ 479 (489)
Q Consensus 453 ~va~~p~~~~i~sgs~dg~i~v~~~~~ 479 (489)
+++|+|++.++++ +.|+.|.+|....
T Consensus 260 ~v~~sp~~~~la~-~~d~~v~iw~~~~ 285 (343)
T 2xzm_R 260 QIAFNPKLQWVAV-GTDQGVKIFNLMT 285 (343)
T ss_dssp EEEECSSSCEEEE-EESSCEEEEESSS
T ss_pred EEEECCCCCEEEE-ECCCCEEEEEeCC
Confidence 9999999987765 5678899997543
No 74
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=1.9e-28 Score=243.69 Aligned_cols=303 Identities=10% Similarity=0.100 Sum_probs=221.1
Q ss_pred cccCCCc-eeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 92 RSFGKPG-ISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 92 ~~~~~~~-V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
+..|... +.|+.| ++++|++|+.||.|++||+.+.+... .+.+|... |.+++|+|++ .
T Consensus 117 l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~--------------~~~~h~~~---V~~l~~~~~~--~ 175 (464)
T 3v7d_B 117 LRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLL--------------QLSGHDGG---VWALKYAHGG--I 175 (464)
T ss_dssp EECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEE--------------EECCCSSC---EEEEEECSTT--E
T ss_pred EcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEE--------------EEeCCCcC---EEEEEEcCCC--E
Confidence 4455556 577776 56799999999999999998854443 22456666 9999999986 8
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEec--CCCcEEEEEeCCCcEEEEECCCCCcC-
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSA--VNTSRLIASDTHGVVNIWDRRVGVLP- 247 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~l~s~s~dg~i~iwd~~~~~~~- 247 (489)
+++++.| |+|++||+..+ . ....+.+|...|.+++|++ ++. +|++++.|+.|++||++++...
T Consensus 176 l~s~s~d-g~i~vwd~~~~-----~-------~~~~~~~h~~~v~~l~~~~~~~~~-~l~s~s~d~~i~vwd~~~~~~~~ 241 (464)
T 3v7d_B 176 LVSGSTD-RTVRVWDIKKG-----C-------CTHVFEGHNSTVRCLDIVEYKNIK-YIVTGSRDNTLHVWKLPKESSVP 241 (464)
T ss_dssp EEEEETT-SCEEEEETTTT-----E-------EEEEECCCSSCEEEEEEEESSSCE-EEEEEETTSCEEEEECCCCCCC-
T ss_pred EEEEeCC-CCEEEEECCCC-----c-------EEEEECCCCCccEEEEEecCCCCC-EEEEEcCCCcEEEeeCCCCcccc
Confidence 8888888 99999999432 1 1223378999999999995 555 9999999999999999976422
Q ss_pred --------------------ceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeE
Q 037120 248 --------------------SLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTS 307 (489)
Q Consensus 248 --------------------~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~ 307 (489)
......+|...|.++ +++++++++++.||.|++||+++++.+..+.+|... |.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~----v~~ 315 (464)
T 3v7d_B 242 DHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDR----IYS 315 (464)
T ss_dssp -----CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEE
T ss_pred cccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCC----EEE
Confidence 133455788888776 688999999999999999999999999999999877 999
Q ss_pred EEeCCCCcceeecc----------------ccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCC
Q 037120 308 LKLASMLEKIGTLK----------------AQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPP 371 (489)
Q Consensus 308 l~~~~~~~~i~~~~----------------~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 371 (489)
++|+|++..+++.. .....+...|..+.++ +.++++++.|+. ..+++...+........
T Consensus 316 ~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~-v~vwd~~~~~~~~~~~~-- 390 (464)
T 3v7d_B 316 TIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGS-IRGWDANDYSRKFSYHH-- 390 (464)
T ss_dssp EEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSE-EEEEETTTCCEEEEEEC--
T ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCc-EEEEECCCCceeeeecC--
Confidence 99999998874322 1122346678888886 456666665543 33444443322211100
Q ss_pred CCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccch-hhHhhhhcccCCcccCCCc
Q 037120 372 AWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIES-LSERTKLKKENRFVPLSEG 450 (489)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~h~~~ 450 (489)
. ......+|.+++. ++++|+ |+.|++||+.++ +.+.. +. +|.+.
T Consensus 391 ----~-------~~~~~~~~~~~~~-~l~~~~-dg~i~iwd~~~g----------~~~~~~~~------------~~~~~ 435 (464)
T 3v7d_B 391 ----T-------NLSAITTFYVSDN-ILVSGS-ENQFNIYNLRSG----------KLVHANIL------------KDADQ 435 (464)
T ss_dssp ----T-------TCCCEEEEEECSS-EEEEEE-TTEEEEEETTTC----------CEEESCTT------------TTCSE
T ss_pred ----C-------CCccEEEEEeCCC-EEEEec-CCeEEEEECCCC----------cEEehhhc------------cCCCc
Confidence 0 1122345666654 666666 899999999998 77654 44 78999
Q ss_pred eEEEEeeCCCCeEEeccCcceeEEEe
Q 037120 451 VTACVTHPLNNTIVAGTKNSSLLVVS 476 (489)
Q Consensus 451 V~~va~~p~~~~i~sgs~dg~i~v~~ 476 (489)
|.+++|+ ....+++++.||.+.++.
T Consensus 436 v~~v~~~-~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 436 IWSVNFK-GKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred EEEEEec-CCEEEEEEEeCCeEEEEE
Confidence 9999998 445677777888877764
No 75
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=5e-29 Score=265.36 Aligned_cols=224 Identities=13% Similarity=0.151 Sum_probs=176.1
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
+..+...|.+++|+|+|++||+|+.||.|+|||+.+..... .+.+|... |++++|+|+++ .|
T Consensus 51 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~--------------~~~~~~~~---v~~~~~s~~~~-~l 112 (814)
T 3mkq_A 51 IQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV--------------DFEAHPDY---IRSIAVHPTKP-YV 112 (814)
T ss_dssp EECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE--------------EEECCSSC---EEEEEECSSSS-EE
T ss_pred EecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE--------------EEecCCCC---EEEEEEeCCCC-EE
Confidence 44566779999999999999999999999999998854433 12345555 99999999986 77
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEec-CCCcEEEEEeCCCcEEEEECCCCCcCcee
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSA-VNTSRLIASDTHGVVNIWDRRVGVLPSLE 250 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 250 (489)
++++.| |+|++||+.... .....+.+|...|.+++|+| ++. .|++++.||.|++||++++... ..
T Consensus 113 ~~~~~d-g~i~vw~~~~~~-----------~~~~~~~~~~~~v~~~~~~p~~~~-~l~~~~~dg~v~vwd~~~~~~~-~~ 178 (814)
T 3mkq_A 113 LSGSDD-LTVKLWNWENNW-----------ALEQTFEGHEHFVMCVAFNPKDPS-TFASGCLDRTVKVWSLGQSTPN-FT 178 (814)
T ss_dssp EEEETT-SEEEEEEGGGTS-----------EEEEEEECCSSCEEEEEEETTEEE-EEEEEETTSEEEEEETTCSSCS-EE
T ss_pred EEEcCC-CEEEEEECCCCc-----------eEEEEEcCCCCcEEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcce-eE
Confidence 788877 999999994321 11122367899999999999 666 9999999999999999876532 22
Q ss_pred eccCCCCceeEEEEee--cCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeecccc-----
Q 037120 251 LSTGSHGTLNSIQLHA--ENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQ----- 323 (489)
Q Consensus 251 ~~~~h~~~v~~~~~~p--~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~----- 323 (489)
....+...+.+++|+| ++.++++++.||.|++||+++++.+..+.+|... |++++|+|++..+++....
T Consensus 179 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~dg~v~v 254 (814)
T 3mkq_A 179 LTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSN----VSFAVFHPTLPIIISGSEDGTLKI 254 (814)
T ss_dssp EECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSC----EEEEEECSSSSEEEEEETTSCEEE
T ss_pred EecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCC----EEEEEEcCCCCEEEEEeCCCeEEE
Confidence 3334558999999999 9999999999999999999999999999988877 9999999999877442211
Q ss_pred -----------ceeeccceeEEEeCCCCCeE-EEEEecCC
Q 037120 324 -----------SKIVSQEIHSIDLDPSCSYQ-LAFHLDDG 351 (489)
Q Consensus 324 -----------~~~~~~~i~~~~~~p~~~~~-~~~~~~~~ 351 (489)
...+...+..++++|++..+ ++.+.+++
T Consensus 255 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 294 (814)
T 3mkq_A 255 WNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG 294 (814)
T ss_dssp EETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTE
T ss_pred EECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCC
Confidence 11234678999999999764 55555544
No 76
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=2.3e-29 Score=241.80 Aligned_cols=285 Identities=11% Similarity=0.120 Sum_probs=182.5
Q ss_pred cccCCCceeEEEECCC---CcEEEEEecCCeEEEEeCCC-cccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCC
Q 037120 92 RSFGKPGISALDFDCK---GIYLVSATRSGCLTVHDFES-LYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLAN 167 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~---g~~la~g~~dg~i~vwd~~~-~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~ 167 (489)
+..|...|++++|+|+ |++||+|+.||.|+|||+.+ ..... ..+.+|... |.+++|+|++
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~-------------~~~~~h~~~---v~~~~~~~~~ 98 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIP-------------KAQQMHTGP---VLDVCWSDDG 98 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEE-------------EEEEECSSC---EEEEEECTTS
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeE-------------EEeccccCC---EEEEEECcCC
Confidence 5567788999999999 69999999999999999986 22211 123456666 9999999987
Q ss_pred CCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEE--ecCCCcEEEEEeCCCcEEEEECCCCC
Q 037120 168 QDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAF--SAVNTSRLIASDTHGVVNIWDRRVGV 245 (489)
Q Consensus 168 ~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~l~s~s~dg~i~iwd~~~~~ 245 (489)
. .|++++.| |.|++||+... ..+. ..+|...|++++| +|++. +|++++.||.|++||+++++
T Consensus 99 ~-~l~s~~~d-g~v~iwd~~~~-----~~~~--------~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 99 S-KVFTASCD-KTAKMWDLSSN-----QAIQ--------IAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp S-EEEEEETT-SEEEEEETTTT-----EEEE--------EEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCSS
T ss_pred C-EEEEEcCC-CcEEEEEcCCC-----Ccee--------eccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCCc
Confidence 5 77888888 99999999432 2211 1558899999999 88887 99999999999999999876
Q ss_pred cCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcc---------------cceeecCCccCCCCeeEEEe
Q 037120 246 LPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRT---------------SAPFHNHKEVCHLPLTSLKL 310 (489)
Q Consensus 246 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~---------------~~~~~~~~~~~~~~v~~l~~ 310 (489)
.+..+..| ..+.++.+ ....+++++.++.+++||++.... +......... -..+..
T Consensus 163 --~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 233 (368)
T 3mmy_A 163 --PMMVLQLP-ERCYCADV--IYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNK----PTGFAL 233 (368)
T ss_dssp --CSEEEECS-SCEEEEEE--ETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSC----EEEEEE
T ss_pred --EEEEEecC-CCceEEEe--cCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCC----CCeEEE
Confidence 44444444 34444444 455777888888888888876432 0011111111 111222
Q ss_pred -CCCCcce-eeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCc
Q 037120 311 -ASMLEKI-GTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRK 388 (489)
Q Consensus 311 -~~~~~~i-~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (489)
+.++... -.+.... ....+..+....... ......++. ..+..
T Consensus 234 ~~~dg~i~i~~~~~~~--~~~~~~~~~~~~~~~-------------~~~~~~~~~--------------------~~v~~ 278 (368)
T 3mmy_A 234 GSIEGRVAIHYINPPN--PAKDNFTFKCHRSNG-------------TNTSAPQDI--------------------YAVNG 278 (368)
T ss_dssp EETTSEEEEEESSCSC--HHHHSEEEECSEEC-----------------CCCEEE--------------------CCEEE
T ss_pred ecCCCcEEEEecCCCC--ccccceeeeeeeccc-------------ccccccccc--------------------cceEE
Confidence 2233211 1111000 000000000000000 000000000 01122
Q ss_pred ceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccC
Q 037120 389 PSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTK 468 (489)
Q Consensus 389 ~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~ 468 (489)
++|+|+ +.++++|+.|+.|+|||+.++ +.+..+. +|...|++++|+|++.+|++|+.
T Consensus 279 ~~~sp~-~~~l~s~~~dg~i~iwd~~~~----------~~~~~~~------------~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 279 IAFHPV-HGTLATVGSDGRFSFWDKDAR----------TKLKTSE------------QLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp EEECTT-TCCEEEEETTSCEEEEETTTT----------EEEEECC------------CCSSCEEEEEECTTSSCEEEEEC
T ss_pred EEEecC-CCEEEEEccCCeEEEEECCCC----------cEEEEec------------CCCCCceEEEECCCCCeEEEEec
Confidence 334443 457788899999999999988 7777777 89999999999999999999998
Q ss_pred cceeEEE
Q 037120 469 NSSLLVV 475 (489)
Q Consensus 469 dg~i~v~ 475 (489)
|+....|
T Consensus 336 d~~~~~~ 342 (368)
T 3mmy_A 336 YDWSKGH 342 (368)
T ss_dssp CCSTTCG
T ss_pred ccccccc
Confidence 8755543
No 77
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=9.8e-29 Score=240.27 Aligned_cols=157 Identities=18% Similarity=0.299 Sum_probs=126.2
Q ss_pred ceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecC
Q 037120 98 GISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTR 177 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d 177 (489)
.|++++|+|+|++||+|+.||.|+|||+.+.+... .+.+|... |.+++|+|++. .|++++.|
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~--------------~~~~h~~~---v~~~~~~p~~~-~l~s~s~d 186 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVM--------------ILQGHEQD---IYSLDYFPSGD-KLVSGSGD 186 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE--------------EECCCSSC---EEEEEECTTSS-EEEEEETT
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE--------------EEccCCCC---EEEEEEcCCCC-EEEEecCC
Confidence 49999999999999999999999999998844433 12456665 99999999986 77888888
Q ss_pred CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEec-CCCcEEEEEeCCCcEEEEECCCCCcCceeec----
Q 037120 178 SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSA-VNTSRLIASDTHGVVNIWDRRVGVLPSLELS---- 252 (489)
Q Consensus 178 ~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---- 252 (489)
++|++||++.. ..... ..|...+.+++|+| ++. +|++++.|+.|++||++++. ++..+
T Consensus 187 -~~v~iwd~~~~-----~~~~~--------~~~~~~v~~~~~~~~~~~-~l~~~s~d~~v~iwd~~~~~--~~~~~~~~~ 249 (393)
T 1erj_A 187 -RTVRIWDLRTG-----QCSLT--------LSIEDGVTTVAVSPGDGK-YIAAGSLDRAVRVWDSETGF--LVERLDSEN 249 (393)
T ss_dssp -SEEEEEETTTT-----EEEEE--------EECSSCEEEEEECSTTCC-EEEEEETTSCEEEEETTTCC--EEEEEC---
T ss_pred -CcEEEEECCCC-----eeEEE--------EEcCCCcEEEEEECCCCC-EEEEEcCCCcEEEEECCCCc--EEEeecccc
Confidence 99999999432 11111 12456899999999 666 99999999999999999876 33333
Q ss_pred ---cCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCc
Q 037120 253 ---TGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGR 289 (489)
Q Consensus 253 ---~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~ 289 (489)
.+|...|.+++|+|++++|++++.||+|++||+++..
T Consensus 250 ~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 250 ESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNAN 289 (393)
T ss_dssp ---CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----
T ss_pred cCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCC
Confidence 4789999999999999999999999999999998753
No 78
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.5e-30 Score=251.43 Aligned_cols=275 Identities=13% Similarity=0.216 Sum_probs=205.0
Q ss_pred eeEEEeeCCCCCEEEEE----------ecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEE
Q 037120 158 LDAVRWNLANQDEVACA----------STRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRL 227 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~----------~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 227 (489)
|.+++|+|++..+++++ +.| +.|++||+...... ..... ..|...|++++|+|++. +|
T Consensus 15 v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d-~~v~iw~~~~~~~~-----~~~~~-----~~~~~~v~~~~~s~~~~-~l 82 (416)
T 2pm9_A 15 TATFAWSHDKIPLLVSGTVSGTVDANFSTD-SSLELWSLLAADSE-----KPIAS-----LQVDSKFNDLDWSHNNK-II 82 (416)
T ss_dssp SCBCCBCSSSSCEEEEBCBSSCCCSSCCCC-CCCEEEESSSGGGC-----SCSCC-----CCCSSCEEEEEECSSSS-CE
T ss_pred cceEeeCCCCCCEEEEEecCcccccccCCC-CeEEEEEccCCCCC-----cEEEE-----EecCCceEEEEECCCCC-eE
Confidence 88899999987788888 677 99999999543211 11111 35788999999999999 99
Q ss_pred EEEeCCCcEEEEECCCCC--cCceeeccCCCCceeEEEEeec-CCEEEEEeCCCeEEEEEcCCCc------ccc---eee
Q 037120 228 IASDTHGVVNIWDRRVGV--LPSLELSTGSHGTLNSIQLHAE-NQIIFAAGKHGSIYLWDLRGGR------TSA---PFH 295 (489)
Q Consensus 228 ~s~s~dg~i~iwd~~~~~--~~~~~~~~~h~~~v~~~~~~p~-~~~l~~~~~dg~i~lwd~~~~~------~~~---~~~ 295 (489)
++++.||.|++||+.... ...+..+.+|...|.+++|+|+ +.++++++.||.|++||+++++ ... .+.
T Consensus 83 ~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 162 (416)
T 2pm9_A 83 AGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSM 162 (416)
T ss_dssp EEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSC
T ss_pred EEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccccccc
Confidence 999999999999998721 1145567789999999999998 8999999999999999999886 322 235
Q ss_pred cCCccCCCCeeEEEeCCC-Ccceeeccc----------------cceee------ccceeEEEeCCCCCeEEEEEecCC-
Q 037120 296 NHKEVCHLPLTSLKLASM-LEKIGTLKA----------------QSKIV------SQEIHSIDLDPSCSYQLAFHLDDG- 351 (489)
Q Consensus 296 ~~~~~~~~~v~~l~~~~~-~~~i~~~~~----------------~~~~~------~~~i~~~~~~p~~~~~~~~~~~~~- 351 (489)
.|... |.+++|+|+ +..+++... ....+ ...|.++.|+|++..+++.+.+++
T Consensus 163 ~~~~~----v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 238 (416)
T 2pm9_A 163 SSVDE----VISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN 238 (416)
T ss_dssp CSSCC----CCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS
T ss_pred CCCCC----eeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC
Confidence 66656 999999999 455533110 01111 567999999999864444444443
Q ss_pred --ceEEEEeeccc-eeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcc
Q 037120 352 --WSGVLDVYNSR-VSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNED 428 (489)
Q Consensus 352 --w~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~ 428 (489)
-..+++...+. ... .+.. .....+..++|+|.++.++++|+.|+.|++||+.++ +.
T Consensus 239 ~~~i~~~d~~~~~~~~~------~~~~-----~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~----------~~ 297 (416)
T 2pm9_A 239 DPSILIWDLRNANTPLQ------TLNQ-----GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA----------EQ 297 (416)
T ss_dssp SCCCCEEETTSTTSCSB------CCCS-----CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC----------CE
T ss_pred CceEEEEeCCCCCCCcE------Eeec-----CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC----------cc
Confidence 33455554431 111 1110 011234567888867888999999999999999988 77
Q ss_pred cchhhHhhhhcccCCcccCCCceEEEEeeCCC-CeEEeccCcceeEEEeccccc
Q 037120 429 IESLSERTKLKKENRFVPLSEGVTACVTHPLN-NTIVAGTKNSSLLVVSQKQQC 481 (489)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~-~~i~sgs~dg~i~v~~~~~~~ 481 (489)
+..+. +|.+.|++++|+|++ .+|++++.||.|.||..+...
T Consensus 298 ~~~~~------------~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 298 LSQFP------------ARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp EEEEE------------CSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred ceeec------------CCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 77777 899999999999999 799999999999999876543
No 79
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=1.5e-29 Score=240.85 Aligned_cols=286 Identities=12% Similarity=0.126 Sum_probs=200.2
Q ss_pred ccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEE
Q 037120 93 SFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVA 172 (489)
Q Consensus 93 ~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~ 172 (489)
..|...|.+++|+|++++|++|+.||.|+|||+....... .......|... |.+++|+|++...|+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~-----------~~~~~~~~~~~---v~~~~~~~~~~~~l~ 73 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNV-----------DLLQSLRYKHP---LLCCNFIDNTDLQIY 73 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEE-----------EEEEEEECSSC---EEEEEEEESSSEEEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccc-----------cceeeeecCCc---eEEEEECCCCCcEEE
Confidence 3566779999999999999999999999999998733110 01112356555 999999999642677
Q ss_pred EEecCCCEEEEEEe-ccCCCCCceeeeeceeeeeecCC--cccCeeEEEEecCCCcEEEEEeCCCcEEEEECCC------
Q 037120 173 CASTRSNVVSIYDI-GYISDEPVEVLKTRRSVTVVGSD--VQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRV------ 243 (489)
Q Consensus 173 s~~~d~g~i~vwd~-~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~------ 243 (489)
+++.| |.|++||+ .... . ..+.+ |...|.+++|+| +. .|++++.|+.|++||+++
T Consensus 74 ~~~~d-g~i~~wd~~~~~~---------~----~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~ 137 (342)
T 1yfq_A 74 VGTVQ-GEILKVDLIGSPS---------F----QALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVI 137 (342)
T ss_dssp EEETT-SCEEEECSSSSSS---------E----EECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCE
T ss_pred EEcCC-CeEEEEEeccCCc---------e----EeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccc
Confidence 77777 99999998 5431 1 12366 999999999999 77 999999999999999986
Q ss_pred ---CCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCC-Cccc--ceeecCCccCCCCeeEEEeCC-CCcc
Q 037120 244 ---GVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRG-GRTS--APFHNHKEVCHLPLTSLKLAS-MLEK 316 (489)
Q Consensus 244 ---~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~-~~~~--~~~~~~~~~~~~~v~~l~~~~-~~~~ 316 (489)
++ ++..+ .|...|.+++|+|++ +++++.|+.|++||+++ +... .....|... |.+++|+| ++..
T Consensus 138 ~~~~~--~~~~~-~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~----i~~i~~~~~~~~~ 208 (342)
T 1yfq_A 138 AVKNL--NSNNT-KVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQ----IRDVALLPKEQEG 208 (342)
T ss_dssp EEEES--CSSSS-SSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSC----EEEEEECSGGGCE
T ss_pred cccCC--eeeEE-eeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCc----eeEEEECCCCCCE
Confidence 44 34344 388999999999987 88999999999999998 6542 222344544 88888888 8776
Q ss_pred eeeccccceeeccceeEEEeCCC-----CCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCccee
Q 037120 317 IGTLKAQSKIVSQEIHSIDLDPS-----CSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSW 391 (489)
Q Consensus 317 i~~~~~~~~~~~~~i~~~~~~p~-----~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (489)
++...... .|.-..+... ..... .+.++.... . .......+..++|
T Consensus 209 l~~~~~dg-----~i~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~--------~---~~~~~~~i~~~~~ 259 (342)
T 1yfq_A 209 YACSSIDG-----RVAVEFFDDQGDDYNSSKRF-------------AFRCHRLNL--------K---DTNLAYPVNSIEF 259 (342)
T ss_dssp EEEEETTS-----EEEEEECCTTCCSTTCTTCE-------------EEECCCCCT--------T---CCSSCCCEEEEEE
T ss_pred EEEEecCC-----cEEEEEEcCCCcccccccce-------------eeecccccc--------c---ccccceeEEEEEE
Confidence 65422111 1111112111 01100 011110000 0 0000012334566
Q ss_pred ecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccC-CCceEEEEeeCCCCeEEeccCcc
Q 037120 392 LSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPL-SEGVTACVTHPLNNTIVAGTKNS 470 (489)
Q Consensus 392 ~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~va~~p~~~~i~sgs~dg 470 (489)
+|+ +.++++|+.|+.|++||+.++ +.+..+. +| .+.|++++ |++.+|++|+.||
T Consensus 260 s~~-~~~l~~~~~dg~i~vwd~~~~----------~~~~~~~------------~~h~~~v~~~~--~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 260 SPR-HKFLYTAGSDGIISCWNLQTR----------KKIKNFA------------KFNEDSVVKIA--CSDNILCLATSDD 314 (342)
T ss_dssp CTT-TCCEEEEETTSCEEEEETTTT----------EEEEECC------------CCSSSEEEEEE--ECSSEEEEEEECT
T ss_pred cCC-CCEEEEecCCceEEEEcCccH----------hHhhhhh------------cccCCCceEec--CCCCeEEEEecCC
Confidence 665 456788899999999999988 7777776 88 99999999 9999999999999
Q ss_pred e
Q 037120 471 S 471 (489)
Q Consensus 471 ~ 471 (489)
.
T Consensus 315 ~ 315 (342)
T 1yfq_A 315 T 315 (342)
T ss_dssp H
T ss_pred c
Confidence 8
No 80
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=7.6e-29 Score=244.50 Aligned_cols=277 Identities=14% Similarity=0.194 Sum_probs=197.0
Q ss_pred cCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEE
Q 037120 94 FGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVAC 173 (489)
Q Consensus 94 ~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s 173 (489)
.+..+|.|++| ++++|++|+.||.|+|||+.+.+... .+.+|... |.+++| ++ .++++
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~--------------~~~~h~~~---v~~l~~--~~-~~l~s 188 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKR--------------ILTGHTGS---VLCLQY--DE-RVIIT 188 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEE--------------EECCCSSC---EEEEEC--CS-SEEEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEE--------------EEcCCCCc---EEEEEE--CC-CEEEE
Confidence 34566999887 78999999999999999998844433 22456655 999999 33 48888
Q ss_pred EecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcC-ceeec
Q 037120 174 ASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLP-SLELS 252 (489)
Q Consensus 174 ~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~ 252 (489)
|+.| |+|++||+..+ . ....+.+|...|.+++|+ +. .+++|+.||.|++||+++++.. .....
T Consensus 189 g~~d-g~i~vwd~~~~-----~-------~~~~~~~h~~~v~~l~~~--~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 252 (435)
T 1p22_A 189 GSSD-STVRVWDVNTG-----E-------MLNTLIHHCEAVLHLRFN--NG-MMVTCSKDRSIAVWDMASPTDITLRRVL 252 (435)
T ss_dssp EETT-SCEEEEESSSC-----C-------EEEEECCCCSCEEEEECC--TT-EEEEEETTSCEEEEECSSSSCCEEEEEE
T ss_pred EcCC-CeEEEEECCCC-----c-------EEEEEcCCCCcEEEEEEc--CC-EEEEeeCCCcEEEEeCCCCCCceeeeEe
Confidence 9888 99999999432 1 122237799999999996 34 8999999999999999987633 22456
Q ss_pred cCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceeecccee
Q 037120 253 TGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIH 332 (489)
Q Consensus 253 ~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~ 332 (489)
.+|...|.+++| +++++++|+.||.|++||+++++.+..+.+|... |.++.|+ +..++
T Consensus 253 ~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~----v~~~~~~--~~~l~-------------- 310 (435)
T 1p22_A 253 VGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG----IACLQYR--DRLVV-------------- 310 (435)
T ss_dssp CCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSC----EEEEEEE--TTEEE--------------
T ss_pred cCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCc----EEEEEeC--CCEEE--------------
Confidence 689999999999 7889999999999999999999999999988877 8888773 23332
Q ss_pred EEEeCCCCCeEEEEEecCCceEEEEe--------eccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecC
Q 037120 333 SIDLDPSCSYQLAFHLDDGWSGVLDV--------YNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSS 404 (489)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~w~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~ 404 (489)
+++.++. ..+++. +.+|...+.+. .| .+.++++|+.
T Consensus 311 ------------~g~~dg~-i~iwd~~~~~~~~~~~~h~~~v~~~--------------------~~---~~~~l~sg~~ 354 (435)
T 1p22_A 311 ------------SGSSDNT-IRLWDIECGACLRVLEGHEELVRCI--------------------RF---DNKRIVSGAY 354 (435)
T ss_dssp ------------EEETTSC-EEEEETTTCCEEEEECCCSSCEEEE--------------------EC---CSSEEEEEET
T ss_pred ------------EEeCCCe-EEEEECCCCCEEEEEeCCcCcEEEE--------------------Ee---cCCEEEEEeC
Confidence 2222221 112222 22222222221 12 2668999999
Q ss_pred CCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEeccccc
Q 037120 405 DHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQKQQC 481 (489)
Q Consensus 405 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~~~~~ 481 (489)
||.|++||+........ ......+..+. +|.+.|++++| ++..|++|+.||.|.||..+...
T Consensus 355 dg~i~vwd~~~~~~~~~-~~~~~~~~~~~------------~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 355 DGKIKVWDLVAALDPRA-PAGTLCLRTLV------------EHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp TSCEEEEEHHHHTSTTS-CTTTTEEEEEC------------CCSSCCCCEEE--CSSCEEECCSSSEEEEEC-----
T ss_pred CCcEEEEECCCCCCccc-cccchheeecc------------CCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCC
Confidence 99999999976510000 00000233344 89999999999 67899999999999999876554
No 81
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=1.4e-28 Score=229.72 Aligned_cols=220 Identities=13% Similarity=0.168 Sum_probs=169.5
Q ss_pred ccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecC--CCcE
Q 037120 149 LLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAV--NTSR 226 (489)
Q Consensus 149 ~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~ 226 (489)
.+|... |.+++|+|++. .|++++.| ++|+|||+...... ...++.+|...|++++|+++ +. +
T Consensus 6 ~~h~~~---V~~~~~s~~g~-~las~s~D-~~v~iw~~~~~~~~----------~~~~l~gH~~~V~~v~~s~~~~g~-~ 69 (297)
T 2pm7_B 6 NAHNEM---IHDAVMDYYGK-RMATCSSD-KTIKIFEVEGETHK----------LIDTLTGHEGPVWRVDWAHPKFGT-I 69 (297)
T ss_dssp CSCSSC---EEEEEECTTSS-EEEEEETT-SCEEEEEBCSSCBC----------CCEEECCCSSCEEEEEECCGGGCS-E
T ss_pred cCCcCc---eEEEEECCCCC-EEEEEeCC-CEEEEEecCCCCcE----------EEEEEccccCCeEEEEecCCCcCC-E
Confidence 456665 99999999986 88888888 99999999432111 12234889999999999864 66 9
Q ss_pred EEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeec--CCEEEEEeCCCeEEEEEcCCCcc--cceeecCCccCC
Q 037120 227 LIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAE--NQIIFAAGKHGSIYLWDLRGGRT--SAPFHNHKEVCH 302 (489)
Q Consensus 227 l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~l~~~~~dg~i~lwd~~~~~~--~~~~~~~~~~~~ 302 (489)
|++|+.|++|++||+++++...+..+..|...|.+++|+|+ +.+|++++.||+|++||++++.. ...+.+|...
T Consensus 70 l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~-- 147 (297)
T 2pm7_B 70 LASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG-- 147 (297)
T ss_dssp EEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSC--
T ss_pred EEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCc--
Confidence 99999999999999998753344456689999999999998 88999999999999999987643 3456677766
Q ss_pred CCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCcccc
Q 037120 303 LPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSAD 382 (489)
Q Consensus 303 ~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (489)
|.+++|+|++..-. +. + .....
T Consensus 148 --v~~~~~~p~~~~~~---------------------~~-------------------~----------~~~~~------ 169 (297)
T 2pm7_B 148 --VNSASWAPATIEED---------------------GE-------------------H----------NGTKE------ 169 (297)
T ss_dssp --EEEEEECCCC--------------------------------------------------------------------
T ss_pred --cceEeecCCccccc---------------------cc-------------------C----------CCCCC------
Confidence 88888887642100 00 0 00001
Q ss_pred ccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCc----ccchhhHhhhhcccCCcccCCCceEEEEeeC
Q 037120 383 QLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNE----DIESLSERTKLKKENRFVPLSEGVTACVTHP 458 (489)
Q Consensus 383 ~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p 458 (489)
+.++++|+.|+.|+|||+.++ + ....+. +|.+.|.+++|+|
T Consensus 170 -------------~~~l~sgs~D~~v~lwd~~~~----------~~~~~~~~~l~------------~H~~~V~~v~~sp 214 (297)
T 2pm7_B 170 -------------SRKFVTGGADNLVKIWKYNSD----------AQTYVLESTLE------------GHSDWVRDVAWSP 214 (297)
T ss_dssp -------------CCEEEEEETTSCEEEEEEETT----------TTEEEEEEEEC------------CCSSCEEEEEECC
T ss_pred -------------cceEEEEcCCCcEEEEEEcCC----------CceEEEEEEec------------CCCCceEEEEECC
Confidence 568999999999999999876 3 233455 8999999999999
Q ss_pred CC---CeEEeccCcceeEEEeccc
Q 037120 459 LN---NTIVAGTKNSSLLVVSQKQ 479 (489)
Q Consensus 459 ~~---~~i~sgs~dg~i~v~~~~~ 479 (489)
++ .+||+|+.||+|+||..+.
T Consensus 215 ~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 215 TVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp CCSSSEEEEEEETTSCEEEEEESS
T ss_pred CCCCceEEEEEECCCcEEEEEeCC
Confidence 85 7999999999999997654
No 82
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=2.5e-29 Score=247.88 Aligned_cols=267 Identities=11% Similarity=0.050 Sum_probs=178.9
Q ss_pred cccCCCceeEEEECC-CCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 92 RSFGKPGISALDFDC-KGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~-~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
+..|...|++|+|+| ++.+|++|+.||+|+|||+++...... ..+......+.+++|+|++. +
T Consensus 160 ~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~-~ 223 (435)
T 4e54_B 160 GIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVF---------------ASSDTINIWFCSLDVSASSR-M 223 (435)
T ss_dssp CCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEE---------------ECCSSCSCCCCCEEEETTTT-E
T ss_pred ccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEE---------------eccCCCCccEEEEEECCCCC-E
Confidence 345677799999998 689999999999999999987332211 11111112278899999985 8
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcC-ce
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLP-SL 249 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~ 249 (489)
|++|+.| |.|++||++.. ....+.+|...|++++|+|+++.+|++++.|+.|++||+++.+.. .+
T Consensus 224 l~~g~~d-g~i~~wd~~~~-------------~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~ 289 (435)
T 4e54_B 224 VVTGDNV-GNVILLNMDGK-------------ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASF 289 (435)
T ss_dssp EEEECSS-SBEEEEESSSC-------------BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCC
T ss_pred EEEEeCC-CcEeeeccCcc-------------eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceE
Confidence 8888888 99999998321 112247899999999999999878999999999999999986533 23
Q ss_pred eeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccC--CCCeeEEEeCCCCcceeeccccceee
Q 037120 250 ELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVC--HLPLTSLKLASMLEKIGTLKAQSKIV 327 (489)
Q Consensus 250 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~--~~~v~~l~~~~~~~~i~~~~~~~~~~ 327 (489)
....+|...|++++|+|++.+|++++.||.|+|||+++++....+..|.... ...+....|+|++..+.
T Consensus 290 ~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 360 (435)
T 4e54_B 290 LYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIV--------- 360 (435)
T ss_dssp SBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEE---------
T ss_pred EEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEE---------
Confidence 3345899999999999999999999999999999999998876666554321 11133455666655443
Q ss_pred ccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcc-eeecCCcEEEEeecCCC
Q 037120 328 SQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKP-SWLSTNSIYAVGSSSDH 406 (489)
Q Consensus 328 ~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~sgs~d~ 406 (489)
+.+++++..++....++....+++..++........ ... ..+..+ .|+|+| .+|++|+ |+
T Consensus 361 ------~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~-----~~~------~~v~s~~~fspdg-~~lasg~-d~ 421 (435)
T 4e54_B 361 ------VGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYD-----PES------SGISSLNEFNPMG-DTLASAM-GY 421 (435)
T ss_dssp ------EECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECC-----SSC------CCCCCEEEECTTS-SCEEEEC-SS
T ss_pred ------EEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeC-----CCC------CcEEEEEEECCCC-CEEEEEc-CC
Confidence 233344443333222222223344333333221110 000 011122 466665 4666765 78
Q ss_pred cEEEEeccCC
Q 037120 407 GIHLLDFFPG 416 (489)
Q Consensus 407 ~i~vwd~~~~ 416 (489)
.|+|||+.++
T Consensus 422 ~i~iW~~~~g 431 (435)
T 4e54_B 422 HILIWSQQEA 431 (435)
T ss_dssp EEEECCCC--
T ss_pred cEEEEECCcC
Confidence 9999999877
No 83
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3e-28 Score=238.71 Aligned_cols=280 Identities=11% Similarity=0.097 Sum_probs=203.8
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEe----ccCCCCCceeeeeceeeeeecC------CcccCeeEEEEecCCCcEE
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDI----GYISDEPVEVLKTRRSVTVVGS------DVQKGLSDLAFSAVNTSRL 227 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~----~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~l 227 (489)
|.+++|+|++..+|++++.| |.|++||+ ..+... ..+.....+...+. +|...|++++|+|++. +|
T Consensus 48 v~~~~~s~~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l 123 (425)
T 1r5m_A 48 IVSSTWNPLDESILAYGEKN-SVARLARIVETDQEGKKY--WKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN-SI 123 (425)
T ss_dssp CSEEEECSSCTTEEEEEETB-TEEEEEEEEEC------C--EEEEEEEEEECCCCCC------CBCEEEEEECTTSS-EE
T ss_pred eEEEEECCCCCcEEEEecCC-ceEEEEEEecccCCcccc--ccccccccccccccccccccCCCCceEEEEEcCCCC-EE
Confidence 99999999987588888888 99999999 443210 01111111212222 3688999999999998 99
Q ss_pred EEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccC------
Q 037120 228 IASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVC------ 301 (489)
Q Consensus 228 ~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~------ 301 (489)
++++.||.|++|| .+++ .+..+..|...|.+++|+|+++++++++.||.|++||+++++.+..+..+....
T Consensus 124 ~~~~~dg~i~i~~-~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 200 (425)
T 1r5m_A 124 VTGVENGELRLWN-KTGA--LLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAE 200 (425)
T ss_dssp EEEETTSCEEEEE-TTSC--EEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC----------
T ss_pred EEEeCCCeEEEEe-CCCC--eeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeec
Confidence 9999999999999 3434 566677899999999999999999999999999999999998877776554220
Q ss_pred -----CCCeeEEEeCCCCcceeecc---------------ccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeecc
Q 037120 302 -----HLPLTSLKLASMLEKIGTLK---------------AQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNS 361 (489)
Q Consensus 302 -----~~~v~~l~~~~~~~~i~~~~---------------~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~ 361 (489)
...+.++.|++++..+.... .....+...|..+.|+|++.++++++.++. ..+++...+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~-i~i~d~~~~ 279 (425)
T 1r5m_A 201 NHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGT-LRIWHGGNG 279 (425)
T ss_dssp -----CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSC-EEEECSSSB
T ss_pred cccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCE-EEEEECCCC
Confidence 01178888988876552211 112235678999999999998887776554 234444333
Q ss_pred ceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhccc
Q 037120 362 RVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKE 441 (489)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (489)
........ . ...+..++|+|++ ++++++.|+.|++||+.++ +.+..+.
T Consensus 280 ~~~~~~~~------~------~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~----------~~~~~~~-------- 327 (425)
T 1r5m_A 280 NSQNCFYG------H------SQSIVSASWVGDD--KVISCSMDGSVRLWSLKQN----------TLLALSI-------- 327 (425)
T ss_dssp SCSEEECC------C------SSCEEEEEEETTT--EEEEEETTSEEEEEETTTT----------EEEEEEE--------
T ss_pred ccceEecC------C------CccEEEEEECCCC--EEEEEeCCCcEEEEECCCC----------cEeEecc--------
Confidence 32221110 0 1223457888887 8888999999999999988 7777766
Q ss_pred CCcccCCCceEEEEeeCCCCeEEeccCcceeEEEeccccc
Q 037120 442 NRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQKQQC 481 (489)
Q Consensus 442 ~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~~~~~ 481 (489)
.|...|.+++|+|++.+|++|+.||.|.||..+...
T Consensus 328 ----~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 328 ----VDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp ----CTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred ----cCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 899999999999999999999999999999876543
No 84
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=2.8e-28 Score=229.33 Aligned_cols=250 Identities=14% Similarity=0.226 Sum_probs=183.6
Q ss_pred ccccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcE
Q 037120 147 KHLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSR 226 (489)
Q Consensus 147 ~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 226 (489)
.+.+|... |++++|+|++. +|++++.| |.|++||+... . ....+.+|...|.+++|+|+++ +
T Consensus 18 ~~~gh~~~---v~~~~~s~~~~-~l~s~~~d-g~i~iw~~~~~-----~-------~~~~~~~h~~~v~~~~~~~~~~-~ 79 (312)
T 4ery_A 18 TLAGHTKA---VSSVKFSPNGE-WLASSSAD-KLIKIWGAYDG-----K-------FEKTISGHKLGISDVAWSSDSN-L 79 (312)
T ss_dssp EECCCSSC---EEEEEECTTSS-EEEEEETT-SCEEEEETTTC-----C-------EEEEECCCSSCEEEEEECTTSS-E
T ss_pred EEcccCCc---EEEEEECCCCC-EEEEeeCC-CeEEEEeCCCc-----c-------cchhhccCCCceEEEEEcCCCC-E
Confidence 34567777 99999999986 78888888 99999998432 1 1122378999999999999998 9
Q ss_pred EEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCee
Q 037120 227 LIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLT 306 (489)
Q Consensus 227 l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~ 306 (489)
|++++.|+.|++||+++++ ++..+.+|...|.+++|+|+++++++++.||.|++||+++++.+..+..|... |.
T Consensus 80 l~s~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~----v~ 153 (312)
T 4ery_A 80 LVSASDDKTLKIWDVSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP----VS 153 (312)
T ss_dssp EEEEETTSEEEEEETTTCC--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC----EE
T ss_pred EEEECCCCEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCc----EE
Confidence 9999999999999999877 67777899999999999999999999999999999999999888888888766 88
Q ss_pred EEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCC
Q 037120 307 SLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHL 386 (489)
Q Consensus 307 ~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (489)
+++|+|++..+++. +.++. ..+++...+........ .. ....
T Consensus 154 ~~~~~~~~~~l~~~--------------------------~~d~~-i~~wd~~~~~~~~~~~~------~~-----~~~~ 195 (312)
T 4ery_A 154 AVHFNRDGSLIVSS--------------------------SYDGL-CRIWDTASGQCLKTLID------DD-----NPPV 195 (312)
T ss_dssp EEEECTTSSEEEEE--------------------------ETTSC-EEEEETTTCCEEEEECC------SS-----CCCE
T ss_pred EEEEcCCCCEEEEE--------------------------eCCCc-EEEEECCCCceeeEEec------cC-----CCce
Confidence 88888877665432 11111 11222222211110000 00 0111
Q ss_pred CcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceE--EEEe-eCCCCeE
Q 037120 387 RKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVT--ACVT-HPLNNTI 463 (489)
Q Consensus 387 ~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~--~va~-~p~~~~i 463 (489)
..++|.|+ +.++++++.|+.|++||+.++ +.+..+. +|...+. ...+ .+++.+|
T Consensus 196 ~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~----------~~~~~~~------------~~~~~~~~~~~~~~~~~~~~l 252 (312)
T 4ery_A 196 SFVKFSPN-GKYILAATLDNTLKLWDYSKG----------KCLKTYT------------GHKNEKYCIFANFSVTGGKWI 252 (312)
T ss_dssp EEEEECTT-SSEEEEEETTTEEEEEETTTT----------EEEEEEC------------SSCCSSSCCCEEEECSSSCEE
T ss_pred EEEEECCC-CCEEEEEcCCCeEEEEECCCC----------cEEEEEE------------ecCCceEEEEEEEEeCCCcEE
Confidence 23455565 456778899999999999988 6666655 6655432 2334 4677899
Q ss_pred EeccCcceeEEEeccccc
Q 037120 464 VAGTKNSSLLVVSQKQQC 481 (489)
Q Consensus 464 ~sgs~dg~i~v~~~~~~~ 481 (489)
++|+.||.|.||..+...
T Consensus 253 ~sg~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 253 VSGSEDNLVYIWNLQTKE 270 (312)
T ss_dssp EECCTTSCEEEEETTTCC
T ss_pred EEECCCCEEEEEECCCch
Confidence 999999999999876543
No 85
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=2.8e-28 Score=254.81 Aligned_cols=193 Identities=15% Similarity=0.238 Sum_probs=157.4
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
+..|...|.+++|+|+|++|++|+.||+|+|||+.+..... .+.+|... |.+++|+|++. .|
T Consensus 426 ~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~--------------~~~~h~~~---v~~~~~s~~~~-~l 487 (694)
T 3dm0_A 426 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTR--------------RFVGHTKD---VLSVAFSLDNR-QI 487 (694)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE--------------EEECCSSC---EEEEEECTTSS-CE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCccee--------------EEeCCCCC---EEEEEEeCCCC-EE
Confidence 45677789999999999999999999999999998844333 23557666 99999999986 77
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCC-cEEEEEeCCCcEEEEECCCCCcCcee
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNT-SRLIASDTHGVVNIWDRRVGVLPSLE 250 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~ 250 (489)
++++.| ++|++||+... .... ......+|...|.+++|+|++. ..|++++.|++|++||+++.+ +..
T Consensus 488 ~s~s~D-~~i~iwd~~~~-----~~~~----~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~--~~~ 555 (694)
T 3dm0_A 488 VSASRD-RTIKLWNTLGE-----CKYT----ISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK--LRS 555 (694)
T ss_dssp EEEETT-SCEEEECTTSC-----EEEE----ECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC--EEE
T ss_pred EEEeCC-CEEEEEECCCC-----ccee----eccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc--EEE
Confidence 888888 99999998321 1111 1112367999999999999873 389999999999999999876 666
Q ss_pred eccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceee
Q 037120 251 LSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGT 319 (489)
Q Consensus 251 ~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~ 319 (489)
.+.+|.+.|++++|+|++++|++++.||+|++||+++++.+..+.. ... |.+++|+|++..+..
T Consensus 556 ~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~----v~~~~~sp~~~~l~~ 619 (694)
T 3dm0_A 556 TLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSV----IHALCFSPNRYWLCA 619 (694)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSC----EEEEEECSSSSEEEE
T ss_pred EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCc----EEEEEEcCCCcEEEE
Confidence 7789999999999999999999999999999999999988776654 234 888999988876643
No 86
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=8.3e-28 Score=231.52 Aligned_cols=198 Identities=14% Similarity=0.097 Sum_probs=158.5
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
+..+...|.+++|+|++++|++|+.||.|++||+.+..... ......|... |.+++|+|++. .|
T Consensus 48 ~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~------------~~~~~~~~~~---v~~~~~~~~~~-~l 111 (372)
T 1k8k_C 48 LKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP------------TLVILRINRA---ARCVRWAPNEK-KF 111 (372)
T ss_dssp EECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEE------------EEECCCCSSC---EEEEEECTTSS-EE
T ss_pred ecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeee------------eEEeecCCCc---eeEEEECCCCC-EE
Confidence 44566789999999999999999999999999997743222 1112334444 99999999985 78
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCC-------
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVG------- 244 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~------- 244 (489)
++++.| +.|++||+...... .... ....+|...|.+++|+|++. +|++++.||.|++||++..
T Consensus 112 ~~~~~d-~~v~i~d~~~~~~~--~~~~------~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~ 181 (372)
T 1k8k_C 112 AVGSGS-RVISICYFEQENDW--WVCK------HIKKPIRSTVLSLDWHPNSV-LLAAGSCDFKCRIFSAYIKEVEERPA 181 (372)
T ss_dssp EEEETT-SSEEEEEEETTTTE--EEEE------EECTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEECCCTTTSCCCC
T ss_pred EEEeCC-CEEEEEEecCCCcc--eeee------eeecccCCCeeEEEEcCCCC-EEEEEcCCCCEEEEEccccccccccc
Confidence 888877 99999999543210 1111 11267889999999999998 9999999999999997521
Q ss_pred ---------CcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCc
Q 037120 245 ---------VLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLE 315 (489)
Q Consensus 245 ---------~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 315 (489)
...++..+..|...|.+++|+|+++++++++.||.|++||+++++.+..+..|... |.+++|+|++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----v~~~~~~~~~~ 257 (372)
T 1k8k_C 182 PTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLP----LLAVTFITESS 257 (372)
T ss_dssp CBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCC----EEEEEEEETTE
T ss_pred ccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCC----eEEEEEecCCC
Confidence 11256666689999999999999999999999999999999999999999988766 99999999988
Q ss_pred ceee
Q 037120 316 KIGT 319 (489)
Q Consensus 316 ~i~~ 319 (489)
+++.
T Consensus 258 ~l~~ 261 (372)
T 1k8k_C 258 LVAA 261 (372)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7754
No 87
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4e-28 Score=237.22 Aligned_cols=264 Identities=11% Similarity=0.020 Sum_probs=183.1
Q ss_pred CCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEe
Q 037120 96 KPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAS 175 (489)
Q Consensus 96 ~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~ 175 (489)
..+|.+++|+|||+++|+++.|++|+ |..... .. .+|... |.+++|+|++
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~-----------~l------~gh~~~---v~~V~FsPdg-------- 64 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK-----------DI------NCNSKN---LFHVKEFPLE-------- 64 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCCS-----------CC------SSBGGG---TEEEEEECCC--------
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--cccccc-----------ee------cCCCcc---EEEEEECCCC--------
Confidence 36799999999999999999999999 644311 11 345555 8899999997
Q ss_pred cCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCC
Q 037120 176 TRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGS 255 (489)
Q Consensus 176 ~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h 255 (489)
.+ +.+.+|+.... .. .. ..|...|.+++|+|+|. .|++++.||.|++||... ++..+. |
T Consensus 65 ~~-~~~~~~~~~~~-----~~---~~------~~~~~~V~~vawSPdG~-~LAs~s~dg~V~iwd~~~----~l~~l~-~ 123 (588)
T 2j04_A 65 FE-NKLDFELAQQN-----GL---LN------SQPVCYPRVCKPSPIDD-WMAVLSNNGNVSVFKDNK----MLTNLD-S 123 (588)
T ss_dssp CC-CTTTTSCCCSS-----CS---ST------TSCSCCEEEEEECSSSS-CEEEEETTSCEEEEETTE----EEEECC-C
T ss_pred Cc-ceEEEEeCCCc-----eE---ee------cCCCCcEEEEEECCCCC-EEEEEeCCCcEEEEeCCc----eeeecc-C
Confidence 34 77777775211 10 11 24577999999999999 999999999999999543 455555 5
Q ss_pred CC-----ceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcc-------ccee----ecCCccCCCCeeEEEeCCCCcceee
Q 037120 256 HG-----TLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRT-------SAPF----HNHKEVCHLPLTSLKLASMLEKIGT 319 (489)
Q Consensus 256 ~~-----~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~-------~~~~----~~~~~~~~~~v~~l~~~~~~~~i~~ 319 (489)
.. .|.+++|+|+|++|++|+.||+|+|||+.+++. +.++ .+|... |.+++|+|+| .+
T Consensus 124 ~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~----V~sVawSPdg-La-- 196 (588)
T 2j04_A 124 KGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDW----VTHIVWYEDV-LV-- 196 (588)
T ss_dssp SSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCC----EEEEEEETTE-EE--
T ss_pred CCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccccccccc----EEEEEEcCCc-EE--
Confidence 54 599999999999999999999999999998753 4555 334444 7777777666 22
Q ss_pred ccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEE
Q 037120 320 LKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYA 399 (489)
Q Consensus 320 ~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 399 (489)
+++.|+. .++++...+....+.. .+.. .....+..++|+ | .++
T Consensus 197 -------------------------ass~D~t-VrlWd~~~~~~~~~~~---tL~~-----~h~~~V~svaFs--g-~~L 239 (588)
T 2j04_A 197 -------------------------AALSNNS-VFSMTVSASSHQPVSR---MIQN-----ASRRKITDLKIV--D-YKV 239 (588)
T ss_dssp -------------------------EEETTCC-EEEECCCSSSSCCCEE---EEEC-----CCSSCCCCEEEE--T-TEE
T ss_pred -------------------------EEeCCCe-EEEEECCCCcccccee---eecc-----cccCcEEEEEEE--C-CEE
Confidence 2222221 1233333222100000 0000 001223456777 3 466
Q ss_pred EeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEe--eCCCCeEEeccCcceeEEEec
Q 037120 400 VGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVT--HPLNNTIVAGTKNSSLLVVSQ 477 (489)
Q Consensus 400 ~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~--~p~~~~i~sgs~dg~i~v~~~ 477 (489)
++++ |+.|++||+..+ +...... +|.+.|.+++| +|++..|+++++||. +||..
T Consensus 240 ASa~-~~tIkLWd~~~~----------~~~~~~~------------gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 240 VLTC-PGYVHKIDLKNY----------SISSLKT------------GSLENFHIIPLNHEKESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp EEEC-SSEEEEEETTTT----------EEEEEEC------------SCCSCCCEEEETTCSSCEEEEECSSCEE-EEEES
T ss_pred EEEe-CCeEEEEECCCC----------eEEEEEc------------CCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEee
Confidence 6665 699999999987 4433333 79999999999 999999999999999 88875
Q ss_pred c
Q 037120 478 K 478 (489)
Q Consensus 478 ~ 478 (489)
.
T Consensus 296 d 296 (588)
T 2j04_A 296 D 296 (588)
T ss_dssp S
T ss_pred c
Confidence 4
No 88
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.6e-28 Score=231.06 Aligned_cols=237 Identities=11% Similarity=0.085 Sum_probs=171.6
Q ss_pred EECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEE
Q 037120 103 DFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVS 182 (489)
Q Consensus 103 ~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~ 182 (489)
.+.+++.+|++|+.||.|+|||+.+.+.... +. ... |.++.|+|. +++++.| ++|+
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~--------~~--------~~~---v~~~~~~~~----~~s~s~D-~~i~ 98 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITT--------IT--------TPN---PRTGGEHPA----IISRGPC-NRLL 98 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEE--------EE--------EEC---CCTTCCCCS----EEEECST-TEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEE--------Ee--------cCC---ceeeeeCCc----eEEecCC-CeEE
Confidence 3557889999999999999999988544331 11 112 666888887 7888888 9999
Q ss_pred EEEeccCC----CCCceeeeeceeeeeecCCcccCeeEEEEec--CCCcEEEEEeCCCcEEEEECCCCCcCceeec-cCC
Q 037120 183 IYDIGYIS----DEPVEVLKTRRSVTVVGSDVQKGLSDLAFSA--VNTSRLIASDTHGVVNIWDRRVGVLPSLELS-TGS 255 (489)
Q Consensus 183 vwd~~~~~----~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-~~h 255 (489)
+|+..... ......+... ..+|...|.+++|+| ++. +|++++.||+|++||+++++ ++... ..|
T Consensus 99 ~w~~~~~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~~--~~~~~~~~~ 169 (343)
T 3lrv_A 99 LLYPGNQITILDSKTNKVLREI------EVDSANEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDDS--QYIVHSAKS 169 (343)
T ss_dssp EEETTTEEEEEETTTCCEEEEE------ECCCSSCEEEEECCC---CC-EEEEEETTCCEEEEESSSSC--EEEEECCCS
T ss_pred EEEccCceEEeecCCcceeEEe------ecCCCCCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCCc--EEEEEecCC
Confidence 99884210 0011111111 146778999999999 898 99999999999999999877 44333 355
Q ss_pred CCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCccc-ceeec-CCccCCCCeeEEEeCCCCcceeeccccceeeccceeE
Q 037120 256 HGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTS-APFHN-HKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHS 333 (489)
Q Consensus 256 ~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~-~~~~~-~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~ 333 (489)
...|.+++|+|++.++++|+.||.|++||+++++.+ ..+.. |... |++++|+|+
T Consensus 170 ~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~----v~~l~fs~~-------------------- 225 (343)
T 3lrv_A 170 DVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAK----IKEVKFADN-------------------- 225 (343)
T ss_dssp SCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSC----EEEEEECTT--------------------
T ss_pred CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCC----EEEEEEeCC--------------------
Confidence 668999999999999999999999999999998876 67776 6655 766666554
Q ss_pred EEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEec
Q 037120 334 IDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDF 413 (489)
Q Consensus 334 ~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~ 413 (489)
+.++++|+ |+.|++||+
T Consensus 226 --------------------------------------------------------------g~~l~s~~-~~~v~iwd~ 242 (343)
T 3lrv_A 226 --------------------------------------------------------------GYWMVVEC-DQTVVCFDL 242 (343)
T ss_dssp --------------------------------------------------------------SSEEEEEE-SSBEEEEET
T ss_pred --------------------------------------------------------------CCEEEEEe-CCeEEEEEc
Confidence 33455666 449999999
Q ss_pred cCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCce--EEEEeeCCCCeEEeccC-cceeEEEecc
Q 037120 414 FPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGV--TACVTHPLNNTIVAGTK-NSSLLVVSQK 478 (489)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V--~~va~~p~~~~i~sgs~-dg~i~v~~~~ 478 (489)
.+. +.+..+. .+..|...+ .+++|+|++.+|++|+. |+.+.||.-+
T Consensus 243 ~~~----------~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 243 RKD----------VGTLAYP---------TYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp TSS----------TTCBSSC---------CCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCC----------Ccceeec---------ccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEc
Confidence 887 4443333 000233334 46999999999999988 9999999653
No 89
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.7e-27 Score=231.60 Aligned_cols=324 Identities=13% Similarity=0.109 Sum_probs=199.4
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcc---cccCCCCCC--------------CCCcc----------------
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLY---YQCNGTLPG--------------VGLKE---------------- 143 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~---~~~~~~~~~--------------~g~~~---------------- 143 (489)
..+.+++|+++|++|+++ .++.|++||+.+++ ....-.... .....
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 358899999999976665 57899999988765 221100000 00000
Q ss_pred ----------cccccccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccC
Q 037120 144 ----------DQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKG 213 (489)
Q Consensus 144 ----------~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 213 (489)
+......|... |.+++|+|++..++++++.| |+|++||+..........+.. ..|...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~---v~~~~~s~d~~~l~~~~~~d-g~v~iwd~~~~~~~~~~~~~~--------~~~~~~ 151 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSY---IRNLRLTSDESRLIACADSD-KSLLVFDVDKTSKNVLKLRKR--------FCFSKR 151 (450)
T ss_dssp ----------------CCCCC---EEEEEECTTSSEEEEEEGGG-TEEEEEEECSSSSSCEEEEEE--------EECSSC
T ss_pred ccccCccccCCCCCCCccCCc---eEEEEEcCCCCEEEEEECCC-CeEEEEECcCCCCceeeeeec--------ccCCCC
Confidence 00001123333 99999999998556888888 999999995211121111110 246789
Q ss_pred eeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcC--ceeeccCCCCceeEEEEeec---CCEEEEEeCCCeEEEEEcCCC
Q 037120 214 LSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLP--SLELSTGSHGTLNSIQLHAE---NQIIFAAGKHGSIYLWDLRGG 288 (489)
Q Consensus 214 v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~--~~~~~~~h~~~v~~~~~~p~---~~~l~~~~~dg~i~lwd~~~~ 288 (489)
|++++|+|++. +|++++.||.|++||+.+++.. +...+.+|...|++++|+|+ +++|++++.|+.|++||++++
T Consensus 152 v~~~~~sp~~~-~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~ 230 (450)
T 2vdu_B 152 PNAISIAEDDT-TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC 230 (450)
T ss_dssp EEEEEECTTSS-EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT
T ss_pred ceEEEEcCCCC-EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC
Confidence 99999999999 9999999999999999887532 23356689999999999999 999999999999999999998
Q ss_pred cccce-eecCCccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeecc-ceeee
Q 037120 289 RTSAP-FHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNS-RVSHV 366 (489)
Q Consensus 289 ~~~~~-~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~-~~~~~ 366 (489)
+.+.. +.+|... |++++|+ ++.++++..... .+..+....+ ..+..+.. +....
T Consensus 231 ~~~~~~~~~h~~~----v~~~~~s-d~~~l~s~~~d~-----------------~v~vwd~~~~--~~~~~~~~~~~~~~ 286 (450)
T 2vdu_B 231 FIVDKWLFGHKHF----VSSICCG-KDYLLLSAGGDD-----------------KIFAWDWKTG--KNLSTFDYNSLIKP 286 (450)
T ss_dssp TCEEEECCCCSSC----EEEEEEC-STTEEEEEESSS-----------------EEEEEETTTC--CEEEEEECHHHHGG
T ss_pred ceeeeeecCCCCc----eEEEEEC-CCCEEEEEeCCC-----------------eEEEEECCCC--cEeeeecchhhhhh
Confidence 88776 4577766 8999888 877776432111 1111111111 01111110 00000
Q ss_pred cCC-----CCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEec--cCCCCCCeeeccCcccchhhHhhhhc
Q 037120 367 HCP-----PPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDF--FPGSSSPSHVDYNEDIESLSERTKLK 439 (489)
Q Consensus 367 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (489)
.+. +..+.... .......+..+.|.|++..+++++..|+.|+|||+ ..+. . -+.+..+.
T Consensus 287 ~~~~~~~~~~~~~~~~-~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~--~-----l~~~~~~~------ 352 (450)
T 2vdu_B 287 YLNDQHLAPPRFQNEN-NDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKG--D-----LALKQIIT------ 352 (450)
T ss_dssp GCCTTSBC-----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTT--C-----EEEEEEEE------
T ss_pred hhhhcccccccccccc-cccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCC--c-----eeeccEec------
Confidence 000 00000000 00111234557888877766666658999999999 3320 0 02223334
Q ss_pred ccCCcccCCCceEEEEeeCCCCeEEeccC------cceeEEEeccc
Q 037120 440 KENRFVPLSEGVTACVTHPLNNTIVAGTK------NSSLLVVSQKQ 479 (489)
Q Consensus 440 ~~~~~~~h~~~V~~va~~p~~~~i~sgs~------dg~i~v~~~~~ 479 (489)
+| +.|.+++|+|++-++++++. +..|.||..+.
T Consensus 353 ------~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 353 ------FP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp ------CS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred ------cC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 56 88999999995545554444 44578876443
No 90
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=4e-28 Score=228.65 Aligned_cols=227 Identities=14% Similarity=0.139 Sum_probs=166.5
Q ss_pred ccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecC--CCcE
Q 037120 149 LLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAV--NTSR 226 (489)
Q Consensus 149 ~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~ 226 (489)
.+|... |++++|+|++. +|++++.| ++|+|||+.... ......+.+|...|++++|++. +. +
T Consensus 10 ~~H~~~---V~~v~~s~~g~-~lasgs~D-~~v~lwd~~~~~----------~~~~~~l~gH~~~V~~v~~~~~~~~~-~ 73 (316)
T 3bg1_A 10 TSHEDM---IHDAQMDYYGT-RLATCSSD-RSVKIFDVRNGG----------QILIADLRGHEGPVWQVAWAHPMYGN-I 73 (316)
T ss_dssp ----CC---EEEEEECGGGC-EEEEEETT-TEEEEEEEETTE----------EEEEEEEECCSSCEEEEEECCGGGSS-C
T ss_pred ccccCe---EEEeeEcCCCC-EEEEEeCC-CeEEEEEecCCC----------cEEEEEEcCCCccEEEEEeCCCCCCC-E
Confidence 456666 99999999986 88888888 999999994321 0122334789999999999763 66 9
Q ss_pred EEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeec--CCEEEEEeCCCeEEEEEcCCCcc---cceeecCCccC
Q 037120 227 LIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAE--NQIIFAAGKHGSIYLWDLRGGRT---SAPFHNHKEVC 301 (489)
Q Consensus 227 l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~l~~~~~dg~i~lwd~~~~~~---~~~~~~~~~~~ 301 (489)
|++|+.|++|++||+++++......+.+|...|++++|+|+ +.+|++++.||+|++||++.+.. ...+.+|...
T Consensus 74 l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~- 152 (316)
T 3bg1_A 74 LASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIG- 152 (316)
T ss_dssp EEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSC-
T ss_pred EEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCC-
Confidence 99999999999999998653345556789999999999998 78999999999999999987632 3445566655
Q ss_pred CCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccc
Q 037120 302 HLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSA 381 (489)
Q Consensus 302 ~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (489)
|.+++|+|+...- . ++....+ ..
T Consensus 153 ---v~~~~~~~~~~~~-~-----------------------------------~~~~~~~----------~~-------- 175 (316)
T 3bg1_A 153 ---CNAVSWAPAVVPG-S-----------------------------------LIDHPSG----------QK-------- 175 (316)
T ss_dssp ---BCCCEECCCCCC------------------------------------------CCS----------CC--------
T ss_pred ---cceEEEccccCCc-c-----------------------------------ccccccc----------cC--------
Confidence 7778877764210 0 0000000 00
Q ss_pred cccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCC-
Q 037120 382 DQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLN- 460 (489)
Q Consensus 382 ~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~- 460 (489)
+..+.++++|+.|+.|+|||+..... .+.+..+. +|.+.|.+++|+|++
T Consensus 176 -----------~~~~~~l~sgs~D~~v~lWd~~~~~~-------~~~~~~l~------------~h~~~V~~v~~sp~~~ 225 (316)
T 3bg1_A 176 -----------PNYIKRFASGGCDNLIKLWKEEEDGQ-------WKEEQKLE------------AHSDWVRDVAWAPSIG 225 (316)
T ss_dssp -----------CCCCCBEECCBTTSBCCEEEECTTSC-------EEEEECCB------------CCSSCEEEEECCCCSS
T ss_pred -----------ccccceEEEecCCCeEEEEEeCCCCc-------cceeeecc------------cCCCceEEEEecCCCC
Confidence 01156899999999999999964400 01233455 899999999999987
Q ss_pred ---CeEEeccCcceeEEEeccc
Q 037120 461 ---NTIVAGTKNSSLLVVSQKQ 479 (489)
Q Consensus 461 ---~~i~sgs~dg~i~v~~~~~ 479 (489)
..||+|+.||+|+||..+.
T Consensus 226 ~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 226 LPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CSCCEEEEEETTCEEEEEECSS
T ss_pred CCCceEEEEcCCCeEEEEEccC
Confidence 7899999999999997554
No 91
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=1.1e-27 Score=230.24 Aligned_cols=182 Identities=16% Similarity=0.135 Sum_probs=140.0
Q ss_pred CCceeEEEECCCCcEEEEEe--cCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEE
Q 037120 96 KPGISALDFDCKGIYLVSAT--RSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVAC 173 (489)
Q Consensus 96 ~~~V~~~~fs~~g~~la~g~--~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s 173 (489)
...+++++|||||++||+++ .|++|+|||+.+...... ..|... |.+|+|+|++. ++++
T Consensus 133 ~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~---------------~~~~~~---V~~v~fspdg~-~l~s 193 (365)
T 4h5i_A 133 DDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE---------------IETRGE---VKDLHFSTDGK-VVAY 193 (365)
T ss_dssp TCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE---------------EECSSC---CCEEEECTTSS-EEEE
T ss_pred ccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE---------------eCCCCc---eEEEEEccCCc-eEEe
Confidence 34589999999999987654 689999999998544431 124444 88999999986 7778
Q ss_pred EecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCC----cEEEEECCCCCcCc-
Q 037120 174 ASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHG----VVNIWDRRVGVLPS- 248 (489)
Q Consensus 174 ~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg----~i~iwd~~~~~~~~- 248 (489)
++. +.+.+|+...+. ... .....+|...|.+++|+|++. .+++++.|+ .+++||+.......
T Consensus 194 ~s~--~~~~~~~~~~~~----~~~------~~~~~~~~~~v~~v~fspdg~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~ 260 (365)
T 4h5i_A 194 ITG--SSLEVISTVTGS----CIA------RKTDFDKNWSLSKINFIADDT-VLIAASLKKGKGIVLTKISIKSGNTSVL 260 (365)
T ss_dssp ECS--SCEEEEETTTCC----EEE------EECCCCTTEEEEEEEEEETTE-EEEEEEESSSCCEEEEEEEEETTEEEEE
T ss_pred ccc--eeEEEEEeccCc----cee------eeecCCCCCCEEEEEEcCCCC-EEEEEecCCcceeEEeecccccceecce
Confidence 873 567777763221 111 112367888999999999999 899998777 68889987754322
Q ss_pred -eeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCccccee-ecCCccCCCCeeEEEeCCC
Q 037120 249 -LELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPF-HNHKEVCHLPLTSLKLASM 313 (489)
Q Consensus 249 -~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~-~~~~~~~~~~v~~l~~~~~ 313 (489)
...+.+|...|++++|+|+|++|++|+.|++|+|||+++++++..+ .+|... |++|+|+||
T Consensus 261 ~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~----V~~v~fSpd 323 (365)
T 4h5i_A 261 RSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFA----ITEVTISPD 323 (365)
T ss_dssp EEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSC----EEEEEECTT
T ss_pred eeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCC----EEEEEECCC
Confidence 2345589999999999999999999999999999999999988775 678866 888777765
No 92
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.2e-26 Score=226.15 Aligned_cols=184 Identities=16% Similarity=0.238 Sum_probs=147.2
Q ss_pred CCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEE
Q 037120 95 GKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACA 174 (489)
Q Consensus 95 ~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~ 174 (489)
+...|.+++|+|+|++|++|+.||.|+|||+.+..... .+.+|... |.+++|++ ..++++
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~--------------~~~~~~~~---v~~~~~~~---~~l~~~ 192 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLR--------------TMAGHQAR---VGCLSWNR---HVLSSG 192 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE--------------EECCCSSC---EEEEEEET---TEEEEE
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEE--------------EecCCCCc---eEEEEECC---CEEEEE
Confidence 45669999999999999999999999999998744333 12345555 99999964 388888
Q ss_pred ecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccC
Q 037120 175 STRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTG 254 (489)
Q Consensus 175 ~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 254 (489)
+.| |.|++||++... . ....+.+|...|.+++|+|++. +|++++.|+.|++||+++++ ....+..
T Consensus 193 ~~d-g~i~i~d~~~~~----~-------~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~~--~~~~~~~ 257 (401)
T 4aez_A 193 SRS-GAIHHHDVRIAN----H-------QIGTLQGHSSEVCGLAWRSDGL-QLASGGNDNVVQIWDARSSI--PKFTKTN 257 (401)
T ss_dssp ETT-SEEEEEETTSSS----C-------EEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTCSS--EEEEECC
T ss_pred cCC-CCEEEEecccCc----c-------eeeEEcCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEccCCCCC--ccEEecC
Confidence 888 999999995321 1 1122367999999999999998 99999999999999999866 5656678
Q ss_pred CCCceeEEEEeecCCEEEEEe---CCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCccee
Q 037120 255 SHGTLNSIQLHAENQIIFAAG---KHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIG 318 (489)
Q Consensus 255 h~~~v~~~~~~p~~~~l~~~~---~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~ 318 (489)
|...|.+++|+|++..+++.+ .|+.|++||+++++.+..+.. ... |.+++|+|++..++
T Consensus 258 ~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~-~~~----v~~~~~s~~~~~l~ 319 (401)
T 4aez_A 258 HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA-GSQ----VTSLIWSPHSKEIM 319 (401)
T ss_dssp CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC-SSC----EEEEEECSSSSEEE
T ss_pred CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC-CCc----EEEEEECCCCCeEE
Confidence 999999999999876555543 599999999999888777753 344 88888888877665
No 93
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=4.6e-27 Score=225.12 Aligned_cols=266 Identities=12% Similarity=0.081 Sum_probs=172.8
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
...+...|++++|+|||++||+|+.+| ++|||++....... .+... +..++|.+.+..++
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~----------------~~~~~---~~~~~~~~~~~~~~ 74 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMS----------------QEMRH---LSKVRMLHRTNYVA 74 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEE----------------EECSC---CCEEEECTTSSEEE
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeee----------------eecCC---eEEEEEcCCCCEEE
Confidence 355677899999999999999999776 78999887433221 11112 67788888876565
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCC----------------------------
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVN---------------------------- 223 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---------------------------- 223 (489)
++++.| ++|++||+..+ ..+... .|...|.+++|+++.
T Consensus 75 ~~~~~d-~~v~iWd~~~~-----~~~~~~--------~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~ 140 (355)
T 3vu4_A 75 FVTGVK-EVVHIWDDVKK-----QDVSRI--------KVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFG 140 (355)
T ss_dssp EECSST-TEEEEEETTTT-----EEEEEE--------ECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEE
T ss_pred EEECCc-cEEEEEECCCC-----cEEEEE--------ECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCC
Confidence 677766 89999998433 111111 123355555554421
Q ss_pred -------CcEEEE--EeCCCcEEEEECCCCC--------------cCceeeccCCCCceeEEEEeecCCEEEEEeCCCe-
Q 037120 224 -------TSRLIA--SDTHGVVNIWDRRVGV--------------LPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGS- 279 (489)
Q Consensus 224 -------~~~l~s--~s~dg~i~iwd~~~~~--------------~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~- 279 (489)
. .++. |+.||.|++||+++++ .+++..+.+|...|++++|+|++++|++++.||+
T Consensus 141 ~~~~~s~~-~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~ 219 (355)
T 3vu4_A 141 GVCEFSNG-LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTI 219 (355)
T ss_dssp EEEEEETT-EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSE
T ss_pred ceEEEEcc-EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCE
Confidence 2 4444 5789999999998754 1115567799999999999999999999999998
Q ss_pred EEEEEcCCCcccceee-c-CCccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEE
Q 037120 280 IYLWDLRGGRTSAPFH-N-HKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLD 357 (489)
Q Consensus 280 i~lwd~~~~~~~~~~~-~-~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~ 357 (489)
|++||+++++++..+. + |... |.+++|+|+
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~----v~~~~~s~~-------------------------------------------- 251 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRAD----VVDMKWSTD-------------------------------------------- 251 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSC----EEEEEECTT--------------------------------------------
T ss_pred EEEEECCCCcEEEEEEcCCCCCc----EEEEEECCC--------------------------------------------
Confidence 9999999999888887 4 6655 766666654
Q ss_pred eeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhh
Q 037120 358 VYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTK 437 (489)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (489)
+.++++|+.|++|+|||+......+.+.-......... ...
T Consensus 252 --------------------------------------~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~-~~~ 292 (355)
T 3vu4_A 252 --------------------------------------GSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYF-QSE 292 (355)
T ss_dssp --------------------------------------SCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCC-CCS
T ss_pred --------------------------------------CCEEEEEECCCEEEEEEccCCCCcccccccceeecccc-ccc
Confidence 33566778899999999876521111000000000000 000
Q ss_pred hcc--cCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEeccc
Q 037120 438 LKK--ENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQKQ 479 (489)
Q Consensus 438 ~~~--~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~~~ 479 (489)
+.. .....+.......++|+|++..|++++.||.+.+|....
T Consensus 293 ~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 293 WSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp SCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred cceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 000 000012233457799999999999999999999986443
No 94
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=3.8e-27 Score=228.22 Aligned_cols=260 Identities=12% Similarity=0.091 Sum_probs=182.2
Q ss_pred cCCCceeEEEECC-CCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEE
Q 037120 94 FGKPGISALDFDC-KGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVA 172 (489)
Q Consensus 94 ~~~~~V~~~~fs~-~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~ 172 (489)
.+...|.+++|+| ++.+|++|+.||.|++||+....... +..|......|.+++|+|++. .|+
T Consensus 116 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~---------------~~~~~~~~~~v~~~~~~~~~~-~l~ 179 (383)
T 3ei3_B 116 GPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQV---------------FAKTDSWDYWYCCVDVSVSRQ-MLA 179 (383)
T ss_dssp STTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEE---------------EECCCCSSCCEEEEEEETTTT-EEE
T ss_pred CcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEE---------------EeccCCCCCCeEEEEECCCCC-EEE
Confidence 4667799999999 78999999999999999998622211 111221122299999999986 888
Q ss_pred EEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcC--cee
Q 037120 173 CASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLP--SLE 250 (489)
Q Consensus 173 s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~--~~~ 250 (489)
+++.| +.|++||++. . ....+.+|...|.+++|+|+++.+|++++.|+.|++||+++.+.. ++.
T Consensus 180 ~~~~d-~~i~i~d~~~------~-------~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 245 (383)
T 3ei3_B 180 TGDST-GRLLLLGLDG------H-------EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIA 245 (383)
T ss_dssp EEETT-SEEEEEETTS------C-------EEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEE
T ss_pred EECCC-CCEEEEECCC------C-------EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEE
Confidence 88888 9999999921 1 122236799999999999999878999999999999999984321 444
Q ss_pred eccCCCCceeEEEEee-cCCEEEEEeCCCeEEEEEcCCCcccceeecCCccC---CCCeeEEEeCCCCcceeecccccee
Q 037120 251 LSTGSHGTLNSIQLHA-ENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVC---HLPLTSLKLASMLEKIGTLKAQSKI 326 (489)
Q Consensus 251 ~~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~---~~~v~~l~~~~~~~~i~~~~~~~~~ 326 (489)
.+ +|...|.+++|+| ++.++++++.|+.|++||+++++.+..+..|.... ..++. +.|+|++..+
T Consensus 246 ~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~--------- 314 (383)
T 3ei3_B 246 EM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIK-ATWHPMYDLI--------- 314 (383)
T ss_dssp EE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCC-CEECSSSSEE---------
T ss_pred Ee-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceE-EeccCCCCce---------
Confidence 44 7999999999999 99999999999999999999998877777654220 12244 4677765443
Q ss_pred eccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCC
Q 037120 327 VSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDH 406 (489)
Q Consensus 327 ~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~ 406 (489)
.+.++|++.+ +++ .++-..+++..++.......... .. .....++|+|++. ++++|+ |+
T Consensus 315 ------~~~~s~dg~~--s~s-~d~~i~iwd~~~~~~~~~l~~~~---~~-------~~~~~~~~s~~g~-~l~s~s-d~ 373 (383)
T 3ei3_B 315 ------VAGRYPDDQL--LLN-DKRTIDIYDANSGGLVHQLRDPN---AA-------GIISLNKFSPTGD-VLASGM-GF 373 (383)
T ss_dssp ------EEECBCCTTT--CTT-CCCCEEEEETTTCCEEEEECBTT---BC-------SCCCEEEECTTSS-EEEEEE-TT
T ss_pred ------EEEecCCccc--ccC-CCCeEEEEecCCCceeeeecCCC---CC-------ceEEEEEEecCcc-EEEEec-CC
Confidence 3567777766 222 23333455555444333221100 00 1122346777755 556666 99
Q ss_pred cEEEEeccC
Q 037120 407 GIHLLDFFP 415 (489)
Q Consensus 407 ~i~vwd~~~ 415 (489)
.|+|||+.+
T Consensus 374 ~i~iw~~~~ 382 (383)
T 3ei3_B 374 NILIWNRED 382 (383)
T ss_dssp EEEEEECC-
T ss_pred cEEEEecCC
Confidence 999999864
No 95
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.95 E-value=1.2e-26 Score=227.74 Aligned_cols=247 Identities=13% Similarity=0.154 Sum_probs=176.7
Q ss_pred cCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEE
Q 037120 94 FGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVAC 173 (489)
Q Consensus 94 ~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s 173 (489)
.+...|+||+|+|+|++||+|+.||.|+|||+.+.+... . +.+|... |.+++|++. ++++
T Consensus 145 ~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~--------~------~~~h~~~---v~~~s~~~~---~l~s 204 (420)
T 4gga_A 145 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR--------N------MTSHSAR---VGSLSWNSY---ILSS 204 (420)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE--------E------ECCCSSC---EEEEEEETT---EEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE--------E------EeCCCCc---eEEEeeCCC---EEEE
Confidence 344569999999999999999999999999999855544 1 2445555 888988753 8889
Q ss_pred EecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcC--ceee
Q 037120 174 ASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLP--SLEL 251 (489)
Q Consensus 174 ~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~--~~~~ 251 (489)
++.| +.+++||..... .....+.+|...+..+.|+|++. ++++++.|+.|++||..+++.. .+..
T Consensus 205 gs~d-~~i~~~d~~~~~-----------~~~~~~~~h~~~~~~~~~~~~g~-~l~s~~~D~~v~i~~~~~~~~~~~~~~~ 271 (420)
T 4gga_A 205 GSRS-GHIHHHDVRVAE-----------HHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQT 271 (420)
T ss_dssp EETT-SEEEEEETTSSS-----------CEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCCSSCSCCSEE
T ss_pred EeCC-CceeEeeecccc-----------eeeEEecccccceeeeeecCCCC-eeeeeeccccceEEeeccccccceeeee
Confidence 9988 999999984321 11223478999999999999999 9999999999999999886533 3445
Q ss_pred ccCCCCceeEEEEeecCCEEE-EE--eCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceeec
Q 037120 252 STGSHGTLNSIQLHAENQIIF-AA--GKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVS 328 (489)
Q Consensus 252 ~~~h~~~v~~~~~~p~~~~l~-~~--~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~ 328 (489)
...|...|.+++|+|++..++ ++ +.|++|++||+++++++..+..+. . +.++.|++++..+....
T Consensus 272 ~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~-~----v~~~~~~~~~~~lv~~s------- 339 (420)
T 4gga_A 272 FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-Q----VCSILWSPHYKELISGH------- 339 (420)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS-C----EEEEEEETTTTEEEEEE-------
T ss_pred ecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc-c----eeeeeecCCCCeEEEEE-------
Confidence 668999999999999776554 33 349999999999998877776543 3 77788887776554211
Q ss_pred cceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcE
Q 037120 329 QEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGI 408 (489)
Q Consensus 329 ~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i 408 (489)
-..++ .+..+..... ..+..+.+|...+.+ ++|+|+ +.+|++|+.|++|
T Consensus 340 -------g~~d~-~I~iwd~~~~--~~v~~l~gH~~~V~~--------------------l~~spd-g~~l~S~s~D~tv 388 (420)
T 4gga_A 340 -------GFAQN-QLVIWKYPTM--AKVAELKGHTSRVLS--------------------LTMSPD-GATVASAAADETL 388 (420)
T ss_dssp -------CTTTC-CEEEEETTTC--CEEEEECCCSSCEEE--------------------EEECTT-SSCEEEEETTTEE
T ss_pred -------ecCCC-EEEEEECCCC--cEEEEEcCCCCCEEE--------------------EEEcCC-CCEEEEEecCCeE
Confidence 00111 1111111110 123334444444333 345555 5678899999999
Q ss_pred EEEeccCC
Q 037120 409 HLLDFFPG 416 (489)
Q Consensus 409 ~vwd~~~~ 416 (489)
+|||+...
T Consensus 389 riWdv~~~ 396 (420)
T 4gga_A 389 RLWRCFEL 396 (420)
T ss_dssp EEECCSCS
T ss_pred EEEECCCC
Confidence 99999765
No 96
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.95 E-value=2.5e-26 Score=218.26 Aligned_cols=251 Identities=12% Similarity=0.122 Sum_probs=178.9
Q ss_pred cccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEE
Q 037120 148 HLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRL 227 (489)
Q Consensus 148 ~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 227 (489)
+.+|... |++|+|+|++..+|++|+.| ++|+|||+....... ......+.+|...|.+++|+|++. +|
T Consensus 34 L~GH~~~---V~~v~~sp~~~~~l~S~s~D-~~i~vWd~~~~~~~~-------~~~~~~l~~h~~~V~~~~~s~dg~-~l 101 (340)
T 4aow_A 34 LKGHNGW---VTQIATTPQFPDMILSASRD-KTIIMWKLTRDETNY-------GIPQRALRGHSHFVSDVVISSDGQ-FA 101 (340)
T ss_dssp ECCCSSC---EEEEEECTTCTTEEEEEETT-SCEEEEEECCSSSCS-------EEEEEEECCCSSCEEEEEECTTSS-EE
T ss_pred ECCccCC---EEEEEEeCCCCCEEEEEcCC-CeEEEEECCCCCccc-------ceeeEEEeCCCCCEEEEEECCCCC-EE
Confidence 4678877 99999999976799999998 999999996443221 112233488999999999999999 99
Q ss_pred EEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcc-cceeecCCccCCCCee
Q 037120 228 IASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRT-SAPFHNHKEVCHLPLT 306 (489)
Q Consensus 228 ~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~-~~~~~~~~~~~~~~v~ 306 (489)
++++.|+.|++|+..... .......+...+..+.+++++.++++++.|+.+++||+..... ...+.+|... +.
T Consensus 102 ~s~~~d~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~----v~ 175 (340)
T 4aow_A 102 LSGSWDGTLRLWDLTTGT--TTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEW----VS 175 (340)
T ss_dssp EEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSC----EE
T ss_pred EEEcccccceEEeecccc--eeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCc----cc
Confidence 999999999999998765 4444557788899999999999999999999999999987554 3344566655 88
Q ss_pred EEEeCCCCcce--eeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCcccccc
Q 037120 307 SLKLASMLEKI--GTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQL 384 (489)
Q Consensus 307 ~l~~~~~~~~i--~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (489)
.++|++++... ++.. .++ .+........ .....+.+|...+
T Consensus 176 ~~~~~~~~~~~~~~s~~----------------~d~-~i~i~d~~~~--~~~~~~~~h~~~v------------------ 218 (340)
T 4aow_A 176 CVRFSPNSSNPIIVSCG----------------WDK-LVKVWNLANC--KLKTNHIGHTGYL------------------ 218 (340)
T ss_dssp EEEECSCSSSCEEEEEE----------------TTS-CEEEEETTTT--EEEEEECCCSSCE------------------
T ss_pred ceEEccCCCCcEEEEEc----------------CCC-EEEEEECCCC--ceeeEecCCCCcE------------------
Confidence 88887765321 1100 011 0111111100 1222223332222
Q ss_pred CCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEE
Q 037120 385 HLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIV 464 (489)
Q Consensus 385 ~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~ 464 (489)
..++|+|+ +.++++|+.|+.|++||+.+. +.+..+. +...|.+++|+|++. ++
T Consensus 219 --~~~~~s~~-~~~l~s~s~Dg~i~iwd~~~~----------~~~~~~~-------------~~~~v~~~~~~~~~~-~~ 271 (340)
T 4aow_A 219 --NTVTVSPD-GSLCASGGKDGQAMLWDLNEG----------KHLYTLD-------------GGDIINALCFSPNRY-WL 271 (340)
T ss_dssp --EEEEECTT-SSEEEEEETTCEEEEEETTTT----------EEEEEEE-------------CSSCEEEEEECSSSS-EE
T ss_pred --EEEEECCC-CCEEEEEeCCCeEEEEEeccC----------ceeeeec-------------CCceEEeeecCCCCc-ee
Confidence 22345554 567888999999999999988 6665554 557899999999875 55
Q ss_pred eccCcceeEEEecccc
Q 037120 465 AGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 465 sgs~dg~i~v~~~~~~ 480 (489)
+++.|+.|.||..+..
T Consensus 272 ~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 272 CAATGPSIKIWDLEGK 287 (340)
T ss_dssp EEEETTEEEEEETTTT
T ss_pred eccCCCEEEEEECCCC
Confidence 6677999999976543
No 97
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.7e-27 Score=232.86 Aligned_cols=193 Identities=9% Similarity=0.045 Sum_probs=139.8
Q ss_pred CCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCC--CCCceeEEEeeCCCCCEEEE
Q 037120 96 KPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIP--LPQQLDAVRWNLANQDEVAC 173 (489)
Q Consensus 96 ~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~--~~~~V~~v~~~~~~~~~l~s 173 (489)
...|.+++|||+|.+||+++.||.|+|||.+. ... .. . |.. ....|.+++|+|+++ .|++
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~--------~l------~-~~~~~~~~sv~svafSPDG~-~LAs 146 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLT--------NL------D-SKGNLSSRTYHCFEWNPIES-SIVV 146 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEE--------EC------C-CSSCSTTTCEEEEEECSSSS-CEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eee--------ec------c-CCCccccccEEEEEEcCCCC-EEEE
Confidence 56699999999999999999999999999654 111 01 1 111 012399999999986 8888
Q ss_pred EecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcC-ceeec
Q 037120 174 ASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLP-SLELS 252 (489)
Q Consensus 174 ~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~ 252 (489)
|+.| |+|+|||+..+.... ..+-....+.....+|...|.+++|+|++ +++++.|++|++||+..+... ..+.+
T Consensus 147 gs~D-GtVkIWd~~~~~l~~-~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL 221 (588)
T 2j04_A 147 GNED-GELQFFSIRKNSENT-PEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMI 221 (588)
T ss_dssp EETT-SEEEEEECCCCTTTC-CCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEE
T ss_pred EcCC-CEEEEEECCCCcccc-ccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeee
Confidence 8888 999999995432100 00000111111126788999999999988 788889999999999876522 12334
Q ss_pred -cCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEe--CCCCccee
Q 037120 253 -TGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKL--ASMLEKIG 318 (489)
Q Consensus 253 -~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~~~i~ 318 (489)
.+|...|.+++|+ |+.+++++ +++|++||+.+++......+|... |.+++| +|++..++
T Consensus 222 ~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~----V~~va~~~s~d~~~La 283 (588)
T 2j04_A 222 QNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLEN----FHIIPLNHEKESTILL 283 (588)
T ss_dssp ECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSC----CCEEEETTCSSCEEEE
T ss_pred cccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCce----EEEEEeeeCCCCCEEE
Confidence 4788999999999 68888887 699999999987753333367766 888888 77776554
No 98
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.95 E-value=7.9e-26 Score=217.10 Aligned_cols=200 Identities=13% Similarity=0.097 Sum_probs=153.5
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
+..+...|.+++|+|++++|++++.||.|++||+.+...... . .|... |.+++|+|++..++
T Consensus 70 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~--------~-------~~~~~---v~~~~~~~~~~~l~ 131 (369)
T 3zwl_B 70 LDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVAT--------W-------KSPVP---VKRVEFSPCGNYFL 131 (369)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEE--------E-------ECSSC---EEEEEECTTSSEEE
T ss_pred hhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE--------e-------ecCCC---eEEEEEccCCCEEE
Confidence 455677899999999999999999999999999988544431 1 13333 99999999987444
Q ss_pred EEEecCC-----CEEEEEEeccCCCCCceeeeeceeeeeecCCccc--CeeEEEEecCCCcEEEEEeCCCcEEEEECCCC
Q 037120 172 ACASTRS-----NVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQK--GLSDLAFSAVNTSRLIASDTHGVVNIWDRRVG 244 (489)
Q Consensus 172 ~s~~~d~-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~ 244 (489)
+++. + +.|++||+.......... .........+..|.. .+.+++|+|++. .|++++.||.|++||+++.
T Consensus 132 ~~~~--~~~~~~g~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~ 207 (369)
T 3zwl_B 132 AILD--NVMKNPGSINIYEIERDSATHELT-KVSEEPIHKIITHEGLDAATVAGWSTKGK-YIIAGHKDGKISKYDVSNN 207 (369)
T ss_dssp EEEC--CBTTBCCEEEEEEEEECTTTCCEE-EECSSCSEEEECCTTCCCEEEEEECGGGC-EEEEEETTSEEEEEETTTT
T ss_pred EecC--CccCCCCEEEEEEecCCccceeec-ccccceeeeccCCcCccceeEEEEcCCCC-EEEEEcCCCEEEEEECCCC
Confidence 4444 4 899999996543221111 111111112244555 999999999999 9999999999999999983
Q ss_pred CcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceee
Q 037120 245 VLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGT 319 (489)
Q Consensus 245 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~ 319 (489)
.. .+..+..|...|.+++|+|++++|++++.||.|++||+++++.+..+. +... +..++|+|++..++.
T Consensus 208 ~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~----~~~~~~~~~~~~l~~ 276 (369)
T 3zwl_B 208 YE-YVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCP----LNTAVITPLKEFIIL 276 (369)
T ss_dssp TE-EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSC----EEEEEECSSSSEEEE
T ss_pred cE-eEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCC----ceeEEecCCCceEEE
Confidence 22 455667899999999999999999999999999999999998877776 4444 899999999887754
No 99
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.95 E-value=1.4e-26 Score=222.14 Aligned_cols=271 Identities=14% Similarity=0.169 Sum_probs=180.7
Q ss_pred cCCCCCCceeEEEeeCC---CCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecC----
Q 037120 150 LHIPLPQQLDAVRWNLA---NQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAV---- 222 (489)
Q Consensus 150 ~h~~~~~~V~~v~~~~~---~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---- 222 (489)
+|... |.+++|+|+ +...+++++.+ +.|++||+... ..+.....+ ....|...|++++|+|+
T Consensus 16 ~h~~~---v~~i~~~p~~~~~~~~~~~~~~~-~~v~vw~~~~~-----~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~ 84 (366)
T 3k26_A 16 DHNQP---LFGVQFNWHSKEGDPLVFATVGS-NRVTLYECHSQ-----GEIRLLQSY--VDADADENFYTCAWTYDSNTS 84 (366)
T ss_dssp TTCSC---EEEEEECTTCCTTSCEEEEEEET-TEEEEEEECGG-----GCEEEEEEE--ECSCTTCCEEEEEEEECTTTC
T ss_pred CCCCc---eEEEEEecccCCCCceEEEECCC-CEEEEEEcCCC-----cEEEeeeec--cccCCCCcEEEEEeccCCCCC
Confidence 46666 999999984 44456666656 89999999533 222222211 12447789999999999
Q ss_pred CCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEee-cCCEEEEEeCCCeEEEEEcCCCccccee---ecCC
Q 037120 223 NTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHA-ENQIIFAAGKHGSIYLWDLRGGRTSAPF---HNHK 298 (489)
Q Consensus 223 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~lwd~~~~~~~~~~---~~~~ 298 (489)
+. +|++++.||.|++||+.+++ .+..+.+|...|.+++|+| ++.++++++.||.|++||+++++.+..+ ..|.
T Consensus 85 ~~-~l~~~~~dg~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 161 (366)
T 3k26_A 85 HP-LLAVAGSRGIIRIINPITMQ--CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHR 161 (366)
T ss_dssp CE-EEEEEETTCEEEEECTTTCC--EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCS
T ss_pred CC-EEEEecCCCEEEEEEchhce--EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccccc
Confidence 55 89999999999999999876 6667778999999999999 8999999999999999999998887776 5666
Q ss_pred ccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCC
Q 037120 299 EVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSN 378 (489)
Q Consensus 299 ~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (489)
.. |.+++|+|++..+++.. .++. ..+++...+...........+.++..
T Consensus 162 ~~----v~~~~~~~~~~~l~~~~--------------------------~dg~-i~i~d~~~~~~~~~~~~~~~~~~~~~ 210 (366)
T 3k26_A 162 DE----VLSADYDLLGEKIMSCG--------------------------MDHS-LKLWRINSKRMMNAIKESYDYNPNKT 210 (366)
T ss_dssp SC----EEEEEECTTSSEEEEEE--------------------------TTSC-EEEEESCSHHHHHHHHHHHTCCGGGC
T ss_pred Cc----eeEEEECCCCCEEEEec--------------------------CCCC-EEEEECCCCccccccceeEEecCCCC
Confidence 66 88888888776664322 1111 11222221111000000000000000
Q ss_pred ----------------ccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeec----cCcccchhhHhhhh
Q 037120 379 ----------------NSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVD----YNEDIESLSERTKL 438 (489)
Q Consensus 379 ----------------~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~ 438 (489)
.......+..+.|. +.++++++.|+.|++||+.+......... ....+..+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~------ 281 (366)
T 3k26_A 211 NRPFISQKIHFPDFSTRDIHRNYVDCVRWL---GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRF------ 281 (366)
T ss_dssp SSCCCCEEECCCSEEECSSCSSCCCEEEEE---TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEE------
T ss_pred cccccceeeccCccccccCCcceEEEEEEc---CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccc------
Confidence 00011223445565 45888999999999999987621100000 00112222
Q ss_pred cccCCcccCCCceEEEEeeCC--CCeEEeccCcceeEEEecccc
Q 037120 439 KKENRFVPLSEGVTACVTHPL--NNTIVAGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 439 ~~~~~~~~h~~~V~~va~~p~--~~~i~sgs~dg~i~v~~~~~~ 480 (489)
.+|...|++++|+|+ +.+|++|+.||.|.||..+..
T Consensus 282 ------~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 282 ------DYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp ------ECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSS
T ss_pred ------cccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCC
Confidence 379999999999999 999999999999999987654
No 100
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.4e-27 Score=233.79 Aligned_cols=288 Identities=13% Similarity=0.150 Sum_probs=196.7
Q ss_pred cCCCceeEEEECCCCcEEEEEecCCeEEEEeCC---CcccccCCCCCCCCCccccc--ccccCCC-CCCceeEEE--eeC
Q 037120 94 FGKPGISALDFDCKGIYLVSATRSGCLTVHDFE---SLYYQCNGTLPGVGLKEDQS--KHLLHIP-LPQQLDAVR--WNL 165 (489)
Q Consensus 94 ~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~---~~~~~~~~~~~~~g~~~~~~--~~~~h~~-~~~~V~~v~--~~~ 165 (489)
.+...|.+++|+|++++|++|+.||.|+|||++ ....... ...+. .+..+.. ....+.++. +++
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 180 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKF--------LNCECIRKINLKNFGKNEYAVRMRAFVNE 180 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEE--------EEEEEEEEEEGGGGSSCCCEEEEEEEECS
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeec--------cccceeEEEEccCcccccCceEEEEEEcC
Confidence 356779999999999999999999999999995 2222110 01010 0011100 112266676 456
Q ss_pred CCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCC--cccCeeEEEEecCCCcEEEEEeCCCcEEEEECCC
Q 037120 166 ANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSD--VQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRV 243 (489)
Q Consensus 166 ~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~ 243 (489)
++. ++++++.| +.|++||++.. ..+. .+.+ |...|++++|+|++. +|++|+.||.|++||+++
T Consensus 181 ~~~-~l~~~~~d-~~i~iwd~~~~-----~~~~-------~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~ 245 (437)
T 3gre_A 181 EKS-LLVALTNL-SRVIIFDIRTL-----ERLQ-------IIENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRF 245 (437)
T ss_dssp SCE-EEEEEETT-SEEEEEETTTC-----CEEE-------EEECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTT
T ss_pred CCC-EEEEEeCC-CeEEEEeCCCC-----eeeE-------EEccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCC
Confidence 664 88888888 99999999432 1111 1233 888999999999998 999999999999999998
Q ss_pred CCcCceeecc-CCCCceeEEEEee----cCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCccee
Q 037120 244 GVLPSLELST-GSHGTLNSIQLHA----ENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIG 318 (489)
Q Consensus 244 ~~~~~~~~~~-~h~~~v~~~~~~p----~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~ 318 (489)
++ ++..+. .|...|.+++|+| ++.++++++.||.|++||+++++++..+.+|... +..+.|+|++..+.
T Consensus 246 ~~--~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~ 319 (437)
T 3gre_A 246 NV--LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQ----PSMEHFLPIEKGLE 319 (437)
T ss_dssp TE--EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSC----CCGGGGSCBCSSGG
T ss_pred cc--EEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCC----Cccceecccccccc
Confidence 65 555443 7788999996664 6779999999999999999999999999998877 88889999987774
Q ss_pred eccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCC----CCc----------------CC--
Q 037120 319 TLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPP----AWL----------------SD-- 376 (489)
Q Consensus 319 ~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~----~~~----------------~~-- 376 (489)
........+...|.+++|+ ++.++++++.|+. ..++++..+.......... .+. ..
T Consensus 320 ~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (437)
T 3gre_A 320 ELNFCGIRSLNALSTISVS-NDKILLTDEATSS-IVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTST 397 (437)
T ss_dssp GCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTE-EEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC----
T ss_pred cceecccccCCceEEEEEC-CceEEEecCCCCe-EEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccc
Confidence 4333333467789999999 6666666665554 2344444333222111000 000 00
Q ss_pred ---CCccccccCCCcceeecC-CcEEEEeecCCCcEEEEe
Q 037120 377 ---SNNSADQLHLRKPSWLST-NSIYAVGSSSDHGIHLLD 412 (489)
Q Consensus 377 ---~~~~~~~~~~~~~~~~~~-~~~~l~sgs~d~~i~vwd 412 (489)
.......-.+..++|.++ +..++++|+.||.|+||+
T Consensus 398 ~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 398 HSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ---------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 000012223445678877 578999999999999995
No 101
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=1.3e-25 Score=218.89 Aligned_cols=291 Identities=13% Similarity=0.082 Sum_probs=167.6
Q ss_pred cCCCceeEEEECC-CCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCC--CE
Q 037120 94 FGKPGISALDFDC-KGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQ--DE 170 (489)
Q Consensus 94 ~~~~~V~~~~fs~-~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~--~~ 170 (489)
.+...|.+++|+| ++.+|++|+.||.|++||+.+...... ..+... +.+++|++.+. .+
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~---------------~~~~~~---~~~~~~~~~~~~~~~ 158 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADV---------------FNFEET---VYSHHMSPVSTKHCL 158 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEE---------------EECSSC---EEEEEECSSCSSCCE
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcccee---------------ccCCCc---eeeeEeecCCCCCcE
Confidence 3667799999999 788999999999999999998544431 112233 88899998643 27
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCce-
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSL- 249 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~- 249 (489)
+++++.| |.|++||+.... . .. .+.+|...|.+++|+|++..+|++++.||.|++||++++.....
T Consensus 159 ~~~~~~~-~~v~~~d~~~~~-----~---~~----~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~ 225 (408)
T 4a11_B 159 VAVGTRG-PKVQLCDLKSGS-----C---SH----ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLIT 225 (408)
T ss_dssp EEEEESS-SSEEEEESSSSC-----C---CE----EECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEE
T ss_pred EEEEcCC-CeEEEEeCCCcc-----e---ee----eecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccc
Confidence 8888887 999999995331 1 11 23678999999999999986699999999999999987642211
Q ss_pred -------------eeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcc
Q 037120 250 -------------ELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEK 316 (489)
Q Consensus 250 -------------~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 316 (489)
.....|...|.+++|+|+++++++++.||.|++||+++++....+..+.... ....+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~------- 296 (408)
T 4a11_B 226 LDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNN--SKKGLK------- 296 (408)
T ss_dssp CCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCC--CSSCCC-------
T ss_pred ccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceecccccccc--ccccce-------
Confidence 1124788999999999999999999999999999999987655444322110 000000
Q ss_pred eeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCc
Q 037120 317 IGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNS 396 (489)
Q Consensus 317 i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (489)
..+ ....+..++....+ +-..+++...+........ . ...+..++|+|++
T Consensus 297 ---------------~~~-~~~~~~~~~~~~~~-~~i~v~d~~~~~~~~~~~~------~------~~~v~~~~~s~~~- 346 (408)
T 4a11_B 297 ---------------FTV-SCGCSSEFVFVPYG-STIAVYTVYSGEQITMLKG------H------YKTVDCCVFQSNF- 346 (408)
T ss_dssp ---------------CEE-CCSSSSCEEEEEET-TEEEEEETTTCCEEEEECC------C------SSCEEEEEEETTT-
T ss_pred ---------------eEE-ecCCCceEEEEecC-CEEEEEECcCCcceeeecc------C------CCeEEEEEEcCCC-
Confidence 000 01111222222222 2222333333322221110 0 0112335666664
Q ss_pred EEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeC-CCCeEEeccCcceeEEE
Q 037120 397 IYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHP-LNNTIVAGTKNSSLLVV 475 (489)
Q Consensus 397 ~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p-~~~~i~sgs~dg~i~v~ 475 (489)
.++++|+.||.|++||+.+. +.+.... .+ -....+.| ......+++.++.+.+|
T Consensus 347 ~~l~s~~~dg~i~iw~~~~~----------~~~~~~~------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~W 401 (408)
T 4a11_B 347 QELYSGSRDCNILAWVPSLY----------EPVPDDD------------ET---TTKSQLNPAFEDAWSSSDEEGGTSAW 401 (408)
T ss_dssp TEEEEEETTSCEEEEEECC-------------------------------------------------------------
T ss_pred CEEEEECCCCeEEEEeCCCC----------CccCCCC------------ce---EeccccccccceeecccCccCceeec
Confidence 56788899999999999988 5444332 11 12223344 33466778889999999
Q ss_pred eccc
Q 037120 476 SQKQ 479 (489)
Q Consensus 476 ~~~~ 479 (489)
+.++
T Consensus 402 ~~~~ 405 (408)
T 4a11_B 402 SHPQ 405 (408)
T ss_dssp ----
T ss_pred CCcc
Confidence 8664
No 102
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=7.3e-26 Score=220.09 Aligned_cols=269 Identities=13% Similarity=0.055 Sum_probs=174.6
Q ss_pred ccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecC----C-
Q 037120 149 LLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAV----N- 223 (489)
Q Consensus 149 ~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~- 223 (489)
.+|... |++++|+| .+|++++.| |+|++||+....... ... ....+.+|...|++++|+|+ +
T Consensus 13 ~~h~~~---i~~~~~~~---~~l~s~~~d-g~i~iw~~~~~~~~~--~~~----~~~~~~~h~~~v~~~~~~~~~~~~g~ 79 (397)
T 1sq9_A 13 KAHDAD---IFSVSACN---SFTVSCSGD-GYLKVWDNKLLDNEN--PKD----KSYSHFVHKSGLHHVDVLQAIERDAF 79 (397)
T ss_dssp SCSSSC---EEEEEECS---SEEEEEETT-SEEEEEESBCCTTCC--GGG----GEEEEECCTTCEEEEEEEEEEETTTE
T ss_pred hhhhcC---eEEEEecC---CeEEEEcCC-CEEEEEECCCccccc--CCC----cceEEecCCCcEEEEEEecccccCCc
Confidence 456666 99999998 488888888 999999995443111 111 12223679999999999999 8
Q ss_pred --CcEEEEEeCCCcEEEEECCCCCcC---ceeeccCC-----CCceeEEEEe----ecCCE-EEEEeCCCeEEEEEcCC-
Q 037120 224 --TSRLIASDTHGVVNIWDRRVGVLP---SLELSTGS-----HGTLNSIQLH----AENQI-IFAAGKHGSIYLWDLRG- 287 (489)
Q Consensus 224 --~~~l~s~s~dg~i~iwd~~~~~~~---~~~~~~~h-----~~~v~~~~~~----p~~~~-l~~~~~dg~i~lwd~~~- 287 (489)
. +|++++.||.|++||+.+++.+ .+..+..| ...|.+++|+ |++++ +++++.||.|++||+++
T Consensus 80 ~~~-~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 158 (397)
T 1sq9_A 80 ELC-LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPF 158 (397)
T ss_dssp EEE-EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESS
T ss_pred ccc-EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcc
Confidence 7 9999999999999999987621 15566677 5899999999 99999 99999999999999998
Q ss_pred -----Ccccc-----eeec-------CCccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecC
Q 037120 288 -----GRTSA-----PFHN-------HKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDD 350 (489)
Q Consensus 288 -----~~~~~-----~~~~-------~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~ 350 (489)
++.+. .+.+ |... |.+++|+|++ .++. ++.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~~~~~~~~-~l~~--------------------------~~~d- 206 (397)
T 1sq9_A 159 ADESNSLTLNWSPTLELQGTVESPMTPSQF----ATSVDISERG-LIAT--------------------------GFNN- 206 (397)
T ss_dssp SSHHHHTTTCCCCEEEEEEEECCSSSSCCC----CCEEEECTTS-EEEE--------------------------ECTT-
T ss_pred ccccccceeeccCcceeeeeeccccCCCCC----ceEEEECCCc-eEEE--------------------------EeCC-
Confidence 65555 4432 3333 5666665555 4332 2211
Q ss_pred CceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCC---CcEEEEeccCCCCCCeeeccCc
Q 037120 351 GWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSD---HGIHLLDFFPGSSSPSHVDYNE 427 (489)
Q Consensus 351 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d---~~i~vwd~~~~~~~~~~~~~~~ 427 (489)
+-..+++...+............... ...+..++|+|+ +.++++|+.| +.|++||+.++ +
T Consensus 207 g~i~i~d~~~~~~~~~~~~~~~h~~~------~~~i~~i~~~~~-~~~l~~~~~d~~~g~i~i~d~~~~----------~ 269 (397)
T 1sq9_A 207 GTVQISELSTLRPLYNFESQHSMINN------SNSIRSVKFSPQ-GSLLAIAHDSNSFGCITLYETEFG----------E 269 (397)
T ss_dssp SEEEEEETTTTEEEEEEECCC---CC------CCCEEEEEECSS-TTEEEEEEEETTEEEEEEEETTTC----------C
T ss_pred CcEEEEECCCCceeEEEecccccccc------CCccceEEECCC-CCEEEEEecCCCCceEEEEECCCC----------c
Confidence 11122222222111110000000000 012234566666 4567778889 99999999988 6
Q ss_pred ccchhhHhhhhcc-cCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEecccc
Q 037120 428 DIESLSERTKLKK-ENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 428 ~~~~~~~~~~~~~-~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~~~~ 480 (489)
.+..+..+..... ......|...|.+++|+|++.+|++|+.||.|.||..+..
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 270 RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 6655550000000 0000119999999999999999999999999999986543
No 103
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.95 E-value=1.3e-25 Score=214.87 Aligned_cols=263 Identities=14% Similarity=0.145 Sum_probs=175.4
Q ss_pred cCCCceeEEEECCC---CcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEe------e
Q 037120 94 FGKPGISALDFDCK---GIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRW------N 164 (489)
Q Consensus 94 ~~~~~V~~~~fs~~---g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~------~ 164 (489)
.+...|.+++|+|+ |.+|++|+.||.|++||+.+... ....+.+|... |.+++| +
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-------------~~~~~~~~~~~---v~~~~~~~~~~~s 126 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEM-------------PVYSVKGHKEI---INAIDGIGGLGIG 126 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSS-------------CSEEECCCSSC---EEEEEEESGGGCC
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCc-------------cEEEEEecccc---eEEEeeccccccC
Confidence 45667999999999 79999999999999999987431 11223456666 888965 5
Q ss_pred CCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEE----EecCCCcEEEEEeCCCcEEEEE
Q 037120 165 LANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLA----FSAVNTSRLIASDTHGVVNIWD 240 (489)
Q Consensus 165 ~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~----~~~~~~~~l~s~s~dg~i~iwd 240 (489)
|++. .|++++.| |.|++||+...... ...+.... ..+...|.+++ |+|++. +|++++.||.|++||
T Consensus 127 ~~~~-~l~~~~~d-~~i~vwd~~~~~~~-~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d 196 (357)
T 3i2n_A 127 EGAP-EIVTGSRD-GTVKVWDPRQKDDP-VANMEPVQ------GENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFD 196 (357)
T ss_dssp -CCC-EEEEEETT-SCEEEECTTSCSSC-SEEECCCT------TSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEE
T ss_pred CCcc-EEEEEeCC-CeEEEEeCCCCCCc-ceeccccC------CCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEE
Confidence 6665 78888888 99999999543211 11111100 22244899998 678888 999999999999999
Q ss_pred CCCCCcCceeeccCCCCceeEEEEee---cCCEEEEEeCCCeEEEEEcCCCcccceee-----cCCccCCCCeeEEEeCC
Q 037120 241 RRVGVLPSLELSTGSHGTLNSIQLHA---ENQIIFAAGKHGSIYLWDLRGGRTSAPFH-----NHKEVCHLPLTSLKLAS 312 (489)
Q Consensus 241 ~~~~~~~~~~~~~~h~~~v~~~~~~p---~~~~l~~~~~dg~i~lwd~~~~~~~~~~~-----~~~~~~~~~v~~l~~~~ 312 (489)
+++++ .. ....|...|.+++|+| ++.++++++.||.|++||+++++.+..+. .|... |++++|+|
T Consensus 197 ~~~~~--~~-~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~----v~~~~~~~ 269 (357)
T 3i2n_A 197 LRNMA--LR-WETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKST----VWQVRHLP 269 (357)
T ss_dssp TTTTE--EE-EEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSC----EEEEEEET
T ss_pred CccCc--ee-eecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCC----EEEEEECC
Confidence 99876 33 3457889999999999 99999999999999999999887766655 77766 88888888
Q ss_pred CCc-ceeeccccceeeccceeEEEeC-------CCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCcccccc
Q 037120 313 MLE-KIGTLKAQSKIVSQEIHSIDLD-------PSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQL 384 (489)
Q Consensus 313 ~~~-~i~~~~~~~~~~~~~i~~~~~~-------p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (489)
++. ++++......+. ++.+... +++.... ..+.+ ..+....+|. .
T Consensus 270 ~~~~~l~~~~~dg~i~---iwd~~~~~~~~~~~~~g~~~~---~~~~~-~~~~~~~~~~--------------------~ 322 (357)
T 3i2n_A 270 QNRELFLTAGGAGGLH---LWKYEYPIQRSKKDSEGIEMG---VAGSV-SLLQNVTLST--------------------Q 322 (357)
T ss_dssp TEEEEEEEEETTSEEE---EEEEECCSCC--CCTTSCCCC---CCCEE-EEEEEEECCS--------------------S
T ss_pred CCCcEEEEEeCCCcEE---EeecCCCcccccccCCCCccc---ccccc-ceeeccccCC--------------------C
Confidence 876 454322111111 1111100 0000000 00000 1111222221 1
Q ss_pred CCCcceeecCCcEEEEeecCCCcEEEEeccCC
Q 037120 385 HLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPG 416 (489)
Q Consensus 385 ~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~ 416 (489)
.+..++|+|++..++++|+.|+.|+|||+.+.
T Consensus 323 ~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 323 PISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp CEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred CeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 23446788887777779999999999999865
No 104
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=2.2e-25 Score=219.42 Aligned_cols=286 Identities=10% Similarity=0.041 Sum_probs=194.3
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
..+.+++|+|++.++++++.|+.|++||+.+.+.... .....+.+|... |.+++|++++. ++++++.
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~---------~~~~~~~~~~~~---v~~~~~~~~~~-~~~s~~~ 189 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRL---------SPPEKYKKKLGF---VETISIPEHNE-LWVSQMQ 189 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEE---------CCCHHHHTTCCE---EEEEEEGGGTE-EEEEEGG
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeee---------cCcccccccCCc---eeEEEEcCCCE-EEEEECC
Confidence 4477999999888888888999999999988554431 111122345555 99999998874 8888887
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCC
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSH 256 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~ 256 (489)
| +.|++||+... .. .. .+..|...+.+++|+|++..++++++.|+.|++||+++++ .+..+.. .
T Consensus 190 d-~~v~~~d~~~~-----~~---~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~--~~~~~~~-~ 253 (433)
T 3bws_A 190 A-NAVHVFDLKTL-----AY---KA----TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL--EIRKTDK-I 253 (433)
T ss_dssp G-TEEEEEETTTC-----CE---EE----EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE--EEEECCC-C
T ss_pred C-CEEEEEECCCc-----eE---EE----EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc--EEEEecC-C
Confidence 7 99999999432 11 11 1245778999999999999344566689999999999875 4444433 4
Q ss_pred CceeEEEEeecCCEEEEEe--------CCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceeec
Q 037120 257 GTLNSIQLHAENQIIFAAG--------KHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVS 328 (489)
Q Consensus 257 ~~v~~~~~~p~~~~l~~~~--------~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~ 328 (489)
..+.+++|+|+++++++++ .||.|++||+++++.+..+. +... +.+++|+|+++.+
T Consensus 254 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~----~~~~~~~~~g~~l----------- 317 (433)
T 3bws_A 254 GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGN----KRHIVSGNTENKI----------- 317 (433)
T ss_dssp SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEEC----EEEEEECSSTTEE-----------
T ss_pred CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCC----cceEEECCCCCEE-----------
Confidence 5699999999999999988 48899999999887655442 2333 6677777766533
Q ss_pred cceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecC----
Q 037120 329 QEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSS---- 404 (489)
Q Consensus 329 ~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~---- 404 (489)
++....++-..+++...+........ . .....++|+|++..+++++..
T Consensus 318 ---------------~~~~~~~~~v~v~d~~~~~~~~~~~~------~-------~~~~~~~~s~dg~~l~~~~~~~~~~ 369 (433)
T 3bws_A 318 ---------------YVSDMCCSKIEVYDLKEKKVQKSIPV------F-------DKPNTIALSPDGKYLYVSCRGPNHP 369 (433)
T ss_dssp ---------------EEEETTTTEEEEEETTTTEEEEEEEC------S-------SSEEEEEECTTSSEEEEEECCCCCT
T ss_pred ---------------EEEecCCCEEEEEECCCCcEEEEecC------C-------CCCCeEEEcCCCCEEEEEecCCCcc
Confidence 22211111111222222211111000 0 012335677776655555443
Q ss_pred ----------CCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEecc-CcceeE
Q 037120 405 ----------DHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGT-KNSSLL 473 (489)
Q Consensus 405 ----------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs-~dg~i~ 473 (489)
||.|++||+.++ +.+..+. . ...+.+++|+|+++.|++++ .|+.|.
T Consensus 370 ~~~~~~~g~~dg~v~~~d~~~~----------~~~~~~~------------~-~~~~~~~~~s~dg~~l~~~~~~d~~i~ 426 (433)
T 3bws_A 370 TEGYLKKGLVLGKVYVIDTTTD----------TVKEFWE------------A-GNQPTGLDVSPDNRYLVISDFLDHQIR 426 (433)
T ss_dssp TTCTTSCCSSCCEEEEEETTTT----------EEEEEEE------------C-SSSEEEEEECTTSCEEEEEETTTTEEE
T ss_pred ccccccccccceEEEEEECCCC----------cEEEEec------------C-CCCCceEEEcCCCCEEEEEECCCCeEE
Confidence 679999999888 6665554 3 45789999999999888776 599999
Q ss_pred EEecc
Q 037120 474 VVSQK 478 (489)
Q Consensus 474 v~~~~ 478 (489)
+|..+
T Consensus 427 v~~~~ 431 (433)
T 3bws_A 427 VYRRD 431 (433)
T ss_dssp EEEET
T ss_pred EEEec
Confidence 99754
No 105
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.94 E-value=1.3e-25 Score=206.40 Aligned_cols=302 Identities=13% Similarity=0.051 Sum_probs=179.5
Q ss_pred eeEEEECCCCc---EEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEe
Q 037120 99 ISALDFDCKGI---YLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAS 175 (489)
Q Consensus 99 V~~~~fs~~g~---~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~ 175 (489)
+.++.|-..|- .+++++. ..|++|+..+.. ..+....+.+|... |..+.|.|+..+++..+-
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~-----------~~~~~~~~~~~~~~---v~~~~~~~~~~~~~~~~~ 106 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAW-----------QWEKLYTWHFAEVP---VLQIVPVPDVYNLVCVAL 106 (356)
T ss_dssp EEEEEEC----CEEEEEEEES-SEEEEEEESSSS-----------BEEEEEEEECCSSC---EEEECCCTTCCSCEEEEE
T ss_pred EeeeeeccCCCCccEEEEecc-ceEEEcccCCCc-----------cceeeEEEeccCce---eEEEEEcCcccceeeeee
Confidence 66777766553 5666665 589999998841 12223334555555 888999998877776665
Q ss_pred cCCCEEEEEEeccCCCCCc-eeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe--CCCcEEEEECCC-CCcCceee
Q 037120 176 TRSNVVSIYDIGYISDEPV-EVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD--THGVVNIWDRRV-GVLPSLEL 251 (489)
Q Consensus 176 ~d~g~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s--~dg~i~iwd~~~-~~~~~~~~ 251 (489)
|.+.+=+++.-...+. ..+...... .+|...|.++ ++++ ++.+++ .|+.|++|++.. ++ .+..
T Consensus 107 ---~~~~~~~v~sla~spd~~~~~~~l~s----~g~~~~v~~l---~~g~-lv~ss~~g~d~~V~~~~~s~dG~--~~~s 173 (356)
T 2w18_A 107 ---GNLEIREIRALFCSSDDESEKQVLLK----SGNIKAVLGL---TKRR-LVSSSGTLSDQQVEVMTFAEDGG--GKEN 173 (356)
T ss_dssp ---CSSSEEEEEEECC------CCEEEEE----EEEEEEEEEE---TTTE-EEEEESSSTTCEEEEEEECTTSC--EEEE
T ss_pred ---ccccccceEEEEECCCccccccEEEe----CCCeEEEEec---CCCc-EEEecccCCCCcEEEEEECCCCc--eeee
Confidence 3333222221110110 000000000 3355556554 4554 555543 599999999955 44 4555
Q ss_pred ccCCCCceeEEEEee---cCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceeec
Q 037120 252 STGSHGTLNSIQLHA---ENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVS 328 (489)
Q Consensus 252 ~~~h~~~v~~~~~~p---~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~ 328 (489)
...|...++.++|+| ++.+|++++.|++|+|||++++++++++.+|... ...+.+++|+|+|..+.....
T Consensus 174 ~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~-v~~v~~vafSpdG~~lvs~s~------ 246 (356)
T 2w18_A 174 QFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSY-QASVCHKAYSEMGLLFIVLSH------ 246 (356)
T ss_dssp EEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC----CCCEEEEEEETTEEEEEEC-------
T ss_pred eccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcc-eeeeEEEEECCCCCEEEEecc------
Confidence 668999999999999 7899999999999999999999999999865421 123778899999887754221
Q ss_pred cceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcE
Q 037120 329 QEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGI 408 (489)
Q Consensus 329 ~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i 408 (489)
+.+...++.+..+.-.++++..++....+... .+ ++... ....+... .+.++++|+.|++|
T Consensus 247 ---------~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~--~~-p~Gh~------~~~lsg~~-sg~~lASgS~DgTI 307 (356)
T 2w18_A 247 ---------PCAKESESLRSPVFQLIVINPKTTLSVGVMLY--CL-PPGQA------GRFLEGDV-KDHCAAAILTSGTI 307 (356)
T ss_dssp --------------------CCEEEEEEETTTTEEEEEEEE--CC-CTTCC------CCEEEEEE-ETTEEEEEETTSCE
T ss_pred ---------CCCcceeeccCCCcEEEEEECCCCEEEEEEEe--ec-cCCCc------ceeEcccc-CCCEEEEEcCCCcE
Confidence 00001111111111112223222222111100 00 00000 00000000 04478999999999
Q ss_pred EEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceE-EEEeeCCCCeEEeccCcceeEEEe
Q 037120 409 HLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVT-ACVTHPLNNTIVAGTKNSSLLVVS 476 (489)
Q Consensus 409 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~-~va~~p~~~~i~sgs~dg~i~v~~ 476 (489)
+|||+.++ +.+..+. +|.+.|. +++|+|++++|+||+.|++|+||.
T Consensus 308 kIWDl~tG----------k~l~tL~------------gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 308 AIWDLLLG----------QCTALLP------------PVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp EEEETTTC----------SEEEEEC------------CC--CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred EEEECCCC----------cEEEEec------------CCCCCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 99999999 8888888 8988765 589999999999999999999996
No 106
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.94 E-value=3e-25 Score=216.41 Aligned_cols=196 Identities=13% Similarity=0.102 Sum_probs=150.6
Q ss_pred cccCCCceeEEEECC-CCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 92 RSFGKPGISALDFDC-KGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~-~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
+..|...|.+++|+| ++++||+|+.||.|+|||+.+...... .......+.+|... |.+++|+|++..+
T Consensus 77 ~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~-------~~~~~~~~~~h~~~---v~~~~~~p~~~~~ 146 (402)
T 2aq5_A 77 VCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLP-------LREPVITLEGHTKR---VGIVAWHPTAQNV 146 (402)
T ss_dssp BCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSC-------BCSCSEEEECCSSC---EEEEEECSSBTTE
T ss_pred EecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccc-------cCCceEEecCCCCe---EEEEEECcCCCCE
Confidence 455777899999999 999999999999999999988432211 01222334567766 9999999998779
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeec--CCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCc
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVG--SDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPS 248 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 248 (489)
|++++.| |+|++||+... .. ...+ .+|...|.+++|+|++. +|++++.|+.|++||+++++ .
T Consensus 147 l~s~~~d-g~i~iwd~~~~-----~~-------~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~--~ 210 (402)
T 2aq5_A 147 LLSAGCD-NVILVWDVGTG-----AA-------VLTLGPDVHPDTIYSVDWSRDGA-LICTSCRDKRVRVIEPRKGT--V 210 (402)
T ss_dssp EEEEETT-SCEEEEETTTT-----EE-------EEEECTTTCCSCEEEEEECTTSS-CEEEEETTSEEEEEETTTTE--E
T ss_pred EEEEcCC-CEEEEEECCCC-----Cc-------cEEEecCCCCCceEEEEECCCCC-EEEEEecCCcEEEEeCCCCc--e
Confidence 9999988 99999999432 11 1223 56899999999999998 99999999999999999876 4
Q ss_pred eeec-cCCCCc-eeEEEEeecCCEEEEE---eCCCeEEEEEcCCCcc-cceee-cCCccCCCCeeEEEeCCCCcce
Q 037120 249 LELS-TGSHGT-LNSIQLHAENQIIFAA---GKHGSIYLWDLRGGRT-SAPFH-NHKEVCHLPLTSLKLASMLEKI 317 (489)
Q Consensus 249 ~~~~-~~h~~~-v~~~~~~p~~~~l~~~---~~dg~i~lwd~~~~~~-~~~~~-~~~~~~~~~v~~l~~~~~~~~i 317 (489)
+..+ ..|.+. +.+++|+|++.++++| +.|+.|++||+++++. +.... .+... +.+++|+|++..+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l 282 (402)
T 2aq5_A 211 VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSG----VLLPFFDPDTNIV 282 (402)
T ss_dssp EEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSS----CEEEEEETTTTEE
T ss_pred eeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCc----eeEEEEcCCCCEE
Confidence 5555 577766 8999999999999888 6799999999998765 22222 23333 6666666665544
No 107
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.6e-25 Score=214.46 Aligned_cols=225 Identities=14% Similarity=0.175 Sum_probs=170.3
Q ss_pred ccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecC--CCcE
Q 037120 149 LLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAV--NTSR 226 (489)
Q Consensus 149 ~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~ 226 (489)
.+|... |++++|+|++. +|++++.| |.|+|||+... ... ....+.+|...|++++|+++ +. +
T Consensus 8 ~~h~~~---v~~~~~s~~~~-~l~~~~~d-g~i~iw~~~~~------~~~----~~~~~~~h~~~v~~~~~~~~~~~~-~ 71 (379)
T 3jrp_A 8 NAHNEL---IHDAVLDYYGK-RLATCSSD-KTIKIFEVEGE------THK----LIDTLTGHEGPVWRVDWAHPKFGT-I 71 (379)
T ss_dssp EECCCC---EEEEEECSSSS-EEEEEETT-SCEEEEEEETT------EEE----EEEEECCCSSCEEEEEECCGGGCS-E
T ss_pred cCCccc---EEEEEEcCCCC-EEEEEECC-CcEEEEecCCC------cce----eeeEecCCCCcEEEEEeCCCCCCC-E
Confidence 557666 99999999986 78888877 99999999421 111 22234789999999999877 77 9
Q ss_pred EEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeec--CCEEEEEeCCCeEEEEEcCCCcc--cceeecCCccCC
Q 037120 227 LIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAE--NQIIFAAGKHGSIYLWDLRGGRT--SAPFHNHKEVCH 302 (489)
Q Consensus 227 l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~l~~~~~dg~i~lwd~~~~~~--~~~~~~~~~~~~ 302 (489)
|++++.||.|++||+++++......+..|...|.+++|+|+ +.++++++.||.|++||++++.. ...+..|...
T Consensus 72 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~-- 149 (379)
T 3jrp_A 72 LASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG-- 149 (379)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTC--
T ss_pred EEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCc--
Confidence 99999999999999998753345566689999999999999 99999999999999999998754 3345566655
Q ss_pred CCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCcccc
Q 037120 303 LPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSAD 382 (489)
Q Consensus 303 ~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (489)
|.+++|+|........ . ....+
T Consensus 150 --v~~~~~~~~~~~~~~~--------------------------~------------------------~~~~~------ 171 (379)
T 3jrp_A 150 --VNSASWAPATIEEDGE--------------------------H------------------------NGTKE------ 171 (379)
T ss_dssp --EEEEEECCCC------------------------------------------------------------CT------
T ss_pred --eEEEEEcCcccccccc--------------------------c------------------------cCCCC------
Confidence 7777777653211100 0 00111
Q ss_pred ccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCC---
Q 037120 383 QLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPL--- 459 (489)
Q Consensus 383 ~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~--- 459 (489)
+.++++|+.|+.|++||+...... ......+. +|...|++++|+|+
T Consensus 172 -------------~~~l~~~~~dg~i~i~d~~~~~~~------~~~~~~~~------------~h~~~v~~~~~sp~~~~ 220 (379)
T 3jrp_A 172 -------------SRKFVTGGADNLVKIWKYNSDAQT------YVLESTLE------------GHSDWVRDVAWSPTVLL 220 (379)
T ss_dssp -------------TCEEEEEETTSCEEEEEEETTTTE------EEEEEEEC------------CCSSCEEEEEECCCCSS
T ss_pred -------------CCEEEEEeCCCeEEEEEecCCCcc------eeeEEEEe------------cccCcEeEEEECCCCCC
Confidence 678889999999999999876100 01222334 89999999999999
Q ss_pred CCeEEeccCcceeEEEecccc
Q 037120 460 NNTIVAGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 460 ~~~i~sgs~dg~i~v~~~~~~ 480 (489)
+.+|++|+.||.|.||..+..
T Consensus 221 ~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 221 RSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp SEEEEEEETTSCEEEEEESST
T ss_pred CCeEEEEeCCCEEEEEeCCCC
Confidence 899999999999999987653
No 108
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1e-24 Score=204.47 Aligned_cols=242 Identities=15% Similarity=0.129 Sum_probs=176.3
Q ss_pred ccccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcE
Q 037120 147 KHLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSR 226 (489)
Q Consensus 147 ~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 226 (489)
.+.+|... |.+++| |++. .|++++.| |.|++||+... ... ..+..|...|.+++|+|++. +
T Consensus 13 ~l~~h~~~---v~~~~~-~~~~-~l~s~~~d-g~v~vw~~~~~-----~~~-------~~~~~~~~~v~~~~~~~~~~-~ 73 (313)
T 3odt_A 13 TLKGHDQD---VRDVVA-VDDS-KVASVSRD-GTVRLWSKDDQ-----WLG-------TVVYTGQGFLNSVCYDSEKE-L 73 (313)
T ss_dssp EECCCSSC---EEEEEE-EETT-EEEEEETT-SEEEEEEESSS-----EEE-------EEEEECSSCEEEEEEETTTT-E
T ss_pred HhhCCCCC---cEEEEe-cCCC-EEEEEEcC-CcEEEEECCCC-----EEE-------EEeecCCccEEEEEECCCCC-E
Confidence 34567776 999999 7765 78888888 99999999321 111 11256888999999999999 9
Q ss_pred EEEEeCCCcEEEEECCCCCcC-ceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCe
Q 037120 227 LIASDTHGVVNIWDRRVGVLP-SLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPL 305 (489)
Q Consensus 227 l~s~s~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v 305 (489)
|++++.||.|++||+...... .+..+.+|...|.+++| ++.++++++.||.|++|| .++.+..+..|... +
T Consensus 74 l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~----v 145 (313)
T 3odt_A 74 LLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNAS----V 145 (313)
T ss_dssp EEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSC----E
T ss_pred EEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCc----e
Confidence 999999999999999875422 45566789999999999 678999999999999999 55667777777766 8
Q ss_pred eEEEeCC-CCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCcccccc
Q 037120 306 TSLKLAS-MLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQL 384 (489)
Q Consensus 306 ~~l~~~~-~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (489)
.++.|.| ++..+.+ ++.++. ..+++ .+........ . ...
T Consensus 146 ~~~~~~~~~~~~l~~--------------------------~~~d~~-i~i~d--~~~~~~~~~~------~-----~~~ 185 (313)
T 3odt_A 146 WDAKVVSFSENKFLT--------------------------ASADKT-IKLWQ--NDKVIKTFSG------I-----HND 185 (313)
T ss_dssp EEEEEEETTTTEEEE--------------------------EETTSC-EEEEE--TTEEEEEECS------S-----CSS
T ss_pred eEEEEccCCCCEEEE--------------------------EECCCC-EEEEe--cCceEEEEec------c-----Ccc
Confidence 8888776 5444432 222221 01111 0000000000 0 001
Q ss_pred CCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEE
Q 037120 385 HLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIV 464 (489)
Q Consensus 385 ~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~ 464 (489)
.+..++|+|++. +++|+.|+.|++||+.++ +.+..+. +|.+.|++++|+|++ .|+
T Consensus 186 ~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~----------~~~~~~~------------~~~~~i~~~~~~~~~-~l~ 240 (313)
T 3odt_A 186 VVRHLAVVDDGH--FISCSNDGLIKLVDMHTG----------DVLRTYE------------GHESFVYCIKLLPNG-DIV 240 (313)
T ss_dssp CEEEEEEEETTE--EEEEETTSEEEEEETTTC----------CEEEEEE------------CCSSCEEEEEECTTS-CEE
T ss_pred cEEEEEEcCCCe--EEEccCCCeEEEEECCch----------hhhhhhh------------cCCceEEEEEEecCC-CEE
Confidence 123456667655 778899999999999988 7777777 899999999999999 699
Q ss_pred eccCcceeEEEecccc
Q 037120 465 AGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 465 sgs~dg~i~v~~~~~~ 480 (489)
+|+.||.|.+|..+..
T Consensus 241 ~~~~dg~v~iwd~~~~ 256 (313)
T 3odt_A 241 SCGEDRTVRIWSKENG 256 (313)
T ss_dssp EEETTSEEEEECTTTC
T ss_pred EEecCCEEEEEECCCC
Confidence 9999999999986544
No 109
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.6e-25 Score=213.43 Aligned_cols=174 Identities=7% Similarity=0.001 Sum_probs=126.3
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeC--CCCCEEEEE
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNL--ANQDEVACA 174 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~--~~~~~l~s~ 174 (489)
..|.++.|+|+ +++|+.|++|++|+........... . +... ......|... |.+++|+| ++. +++++
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~-~--~~~~-~~~~~~~~~~---v~~~~~~~~~~~~-~l~s~ 145 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSK-T--NKVL-REIEVDSANE---IIYMYGHNEVNTE-YFIWA 145 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETT-T--CCEE-EEEECCCSSC---EEEEECCC---CC-EEEEE
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecC-C--ccee-EEeecCCCCC---EEEEEcCCCCCCC-EEEEE
Confidence 45778889988 9999999999999887532111100 0 0000 0001134344 99999999 775 88888
Q ss_pred ecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccC
Q 037120 175 STRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTG 254 (489)
Q Consensus 175 ~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 254 (489)
+.| |+|++||++... .+... ...|...|++++|+|++. +|++|+.||.|++||+++++... ..+..
T Consensus 146 s~d-g~i~~wd~~~~~-----~~~~~------~~~~~~~i~~~~~~pdg~-~lasg~~dg~i~iwd~~~~~~~~-~~~~~ 211 (343)
T 3lrv_A 146 DNR-GTIGFQSYEDDS-----QYIVH------SAKSDVEYSSGVLHKDSL-LLALYSPDGILDVYNLSSPDQAS-SRFPV 211 (343)
T ss_dssp ETT-CCEEEEESSSSC-----EEEEE------CCCSSCCCCEEEECTTSC-EEEEECTTSCEEEEESSCTTSCC-EECCC
T ss_pred eCC-CcEEEEECCCCc-----EEEEE------ecCCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCCCCc-cEEec
Confidence 888 999999995331 11111 134566899999999999 99999999999999999876321 34555
Q ss_pred -CCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeec
Q 037120 255 -SHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHN 296 (489)
Q Consensus 255 -h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~ 296 (489)
|...|++++|+|++.+|++++ |+.|++||+++++.+..+..
T Consensus 212 ~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~ 253 (343)
T 3lrv_A 212 DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPT 253 (343)
T ss_dssp CTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCC
T ss_pred cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecc
Confidence 999999999999999999999 55999999999876555443
No 110
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.94 E-value=9.2e-25 Score=215.24 Aligned_cols=176 Identities=13% Similarity=0.302 Sum_probs=144.0
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
+..+...|.+++| ++++|++|+.||.|+|||+.+.+... .+.+|... |.+++|+++ .+
T Consensus 169 ~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~--------------~~~~h~~~---v~~l~~~~~---~l 226 (435)
T 1p22_A 169 LTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLN--------------TLIHHCEA---VLHLRFNNG---MM 226 (435)
T ss_dssp ECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEE--------------EECCCCSC---EEEEECCTT---EE
T ss_pred EcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEE--------------EEcCCCCc---EEEEEEcCC---EE
Confidence 4557778999999 78899999999999999998854433 12345555 999999753 88
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceee
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLEL 251 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 251 (489)
++++.| |.|++||+..... ..... .+.+|...|.+++| +++ +|++++.||.|++||+++++ ++..
T Consensus 227 ~s~s~d-g~i~vwd~~~~~~-----~~~~~----~~~~~~~~v~~~~~--~~~-~l~s~~~dg~i~vwd~~~~~--~~~~ 291 (435)
T 1p22_A 227 VTCSKD-RSIAVWDMASPTD-----ITLRR----VLVGHRAAVNVVDF--DDK-YIVSASGDRTIKVWNTSTCE--FVRT 291 (435)
T ss_dssp EEEETT-SCEEEEECSSSSC-----CEEEE----EECCCSSCEEEEEE--ETT-EEEEEETTSEEEEEETTTCC--EEEE
T ss_pred EEeeCC-CcEEEEeCCCCCC-----ceeee----EecCCCCcEEEEEe--CCC-EEEEEeCCCeEEEEECCcCc--EEEE
Confidence 888888 9999999954321 11112 23789999999999 566 99999999999999999877 6777
Q ss_pred ccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEe
Q 037120 252 STGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKL 310 (489)
Q Consensus 252 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 310 (489)
+.+|...|.++++ ++.++++|+.||.|++||+++++.+..+.+|... |.+++|
T Consensus 292 ~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~----v~~~~~ 344 (435)
T 1p22_A 292 LNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL----VRCIRF 344 (435)
T ss_dssp EECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSC----EEEEEC
T ss_pred EcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCc----EEEEEe
Confidence 7799999999998 4789999999999999999999999999988877 888877
No 111
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.94 E-value=1.1e-25 Score=222.38 Aligned_cols=265 Identities=12% Similarity=0.143 Sum_probs=166.0
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcc------------cCeeEEEEecCCC-
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQ------------KGLSDLAFSAVNT- 224 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~------------~~v~~~~~~~~~~- 224 (489)
|++++|+|++. +|++|+.| |.|+|||+.......... .........+.+|. ..|++++|+|++.
T Consensus 31 V~~v~~s~~g~-~la~g~~d-g~v~iw~~~~~~~~~~~~-~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~ 107 (447)
T 3dw8_B 31 ISTVEFNHSGE-LLATGDKG-GRVVIFQQEQENKIQSHS-RGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNA 107 (447)
T ss_dssp EEEEEECSSSS-EEEEEETT-SEEEEEEECC-----CCC-CCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSS
T ss_pred EEEEEECCCCC-EEEEEcCC-CeEEEEEecCCCCCCccc-ccceeEecccccccccccccccccccCceEEEEEcCCCCc
Confidence 99999999985 88888888 999999995432100000 00111233347787 8899999999982
Q ss_pred cEEEEEeCCCcEEEEECCCCCcC-------------------------------------ce-eeccCCCCceeEEEEee
Q 037120 225 SRLIASDTHGVVNIWDRRVGVLP-------------------------------------SL-ELSTGSHGTLNSIQLHA 266 (489)
Q Consensus 225 ~~l~s~s~dg~i~iwd~~~~~~~-------------------------------------~~-~~~~~h~~~v~~~~~~p 266 (489)
..|++++.|+.|++||+.++... +. ....+|...|.+++|+|
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 28999999999999998763210 00 12358999999999999
Q ss_pred cCCEEEEEeCCCeEEEEEcCCC-cccc-------eeecCCccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCC
Q 037120 267 ENQIIFAAGKHGSIYLWDLRGG-RTSA-------PFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDP 338 (489)
Q Consensus 267 ~~~~l~~~~~dg~i~lwd~~~~-~~~~-------~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p 338 (489)
+++++++| .||.|++||+++. +.+. .+..|... |++++|+|++.
T Consensus 188 ~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~----v~~~~~~p~~~----------------------- 239 (447)
T 3dw8_B 188 DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEV----ITAAEFHPNSC----------------------- 239 (447)
T ss_dssp TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCC----EEEEEECSSCT-----------------------
T ss_pred CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcc----eEEEEECCCCC-----------------------
Confidence 99999998 8999999999943 3333 23344444 55555555540
Q ss_pred CCCeEEEEEecCCceEEEEeeccce----eeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEecc
Q 037120 339 SCSYQLAFHLDDGWSGVLDVYNSRV----SHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFF 414 (489)
Q Consensus 339 ~~~~~~~~~~~~~w~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~ 414 (489)
..+++++.++ ...++++..+.. ......................+..++|+|++ .++++++. +.|+|||+.
T Consensus 240 --~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~-~~v~iwd~~ 314 (447)
T 3dw8_B 240 --NTFVYSSSKG-TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG-RYMMTRDY-LSVKVWDLN 314 (447)
T ss_dssp --TEEEEEETTS-CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTS-SEEEEEES-SEEEEEETT
T ss_pred --cEEEEEeCCC-eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCC-CEEEEeeC-CeEEEEeCC
Confidence 3333333222 223444433322 11111000000000000000134456777765 45667777 999999998
Q ss_pred C-CCCCCeeeccCcccchhhHhhhhcccCCcccCCC---------------ceEEEEeeCCCCeEEeccCcceeEEEecc
Q 037120 415 P-GSSSPSHVDYNEDIESLSERTKLKKENRFVPLSE---------------GVTACVTHPLNNTIVAGTKNSSLLVVSQK 478 (489)
Q Consensus 415 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---------------~V~~va~~p~~~~i~sgs~dg~i~v~~~~ 478 (489)
. + +.+..+. +|.. .+..++|+|++.+|++|+.||.|.||..+
T Consensus 315 ~~~----------~~~~~~~------------~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~ 372 (447)
T 3dw8_B 315 MEN----------RPVETYQ------------VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRN 372 (447)
T ss_dssp CCS----------SCSCCEE------------SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETT
T ss_pred CCc----------cccceee------------ccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcC
Confidence 6 5 4444444 4432 13459999999999999999999999876
Q ss_pred cc
Q 037120 479 QQ 480 (489)
Q Consensus 479 ~~ 480 (489)
..
T Consensus 373 ~~ 374 (447)
T 3dw8_B 373 TK 374 (447)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 112
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=3.8e-24 Score=207.61 Aligned_cols=269 Identities=10% Similarity=0.013 Sum_probs=182.9
Q ss_pred cEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEecc
Q 037120 109 IYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGY 188 (489)
Q Consensus 109 ~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~ 188 (489)
.++++++.|+.|++||+.+.+.... +..|. . +.+++|+|++..++++++.| ++|++||+..
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~--------------~~~~~-~---~~~~~~s~dg~~l~~~~~~d-~~i~v~d~~~ 63 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTAT--------------IPVGS-N---PMGAVISPDGTKVYVANAHS-NDVSIIDTAT 63 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEE--------------EECSS-S---EEEEEECTTSSEEEEEEGGG-TEEEEEETTT
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEE--------------eecCC-C---cceEEECCCCCEEEEECCCC-CeEEEEECCC
Confidence 4688899999999999988544431 11222 2 88999999998666788777 9999999943
Q ss_pred CCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecC
Q 037120 189 ISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAEN 268 (489)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 268 (489)
+ +.+... . +...+.+++|+|+++.++++++.|+.|++||+.+++ .+..+.. ...+.+++|+|++
T Consensus 64 ~-----~~~~~~-------~-~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~--~~~~~~~-~~~~~~~~~s~dg 127 (391)
T 1l0q_A 64 N-----NVIATV-------P-AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT--VAGTVKT-GKSPLGLALSPDG 127 (391)
T ss_dssp T-----EEEEEE-------E-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE--EEEEEEC-SSSEEEEEECTTS
T ss_pred C-----eEEEEE-------E-CCCCccceEECCCCCEEEEEECCCCEEEEEECCCCe--EEEEEeC-CCCcceEEECCCC
Confidence 2 222211 2 223899999999999344566678999999999876 4444433 4578999999999
Q ss_pred CEE-EEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEE
Q 037120 269 QII-FAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFH 347 (489)
Q Consensus 269 ~~l-~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~ 347 (489)
+.+ ++++.|+.|++||+++++.+..+..+ .. +.+++|+|++..+. +..
T Consensus 128 ~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~----~~~~~~~~dg~~l~--------------------------~~~ 176 (391)
T 1l0q_A 128 KKLYVTNNGDKTVSVINTVTKAVINTVSVG-RS----PKGIAVTPDGTKVY--------------------------VAN 176 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEECC-SS----EEEEEECTTSSEEE--------------------------EEE
T ss_pred CEEEEEeCCCCEEEEEECCCCcEEEEEecC-CC----cceEEECCCCCEEE--------------------------EEe
Confidence 988 56666999999999998877776653 23 67777777776542 111
Q ss_pred ecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeec--CCCcEEEEeccCCCCCCeeecc
Q 037120 348 LDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSS--SDHGIHLLDFFPGSSSPSHVDY 425 (489)
Q Consensus 348 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs--~d~~i~vwd~~~~~~~~~~~~~ 425 (489)
..++...+++...+........ . .....++|+|++..+++++. .|+.|++||+.++
T Consensus 177 ~~~~~v~~~d~~~~~~~~~~~~------~-------~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~--------- 234 (391)
T 1l0q_A 177 FDSMSISVIDTVTNSVIDTVKV------E-------AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN--------- 234 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEEC------S-------SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT---------
T ss_pred CCCCEEEEEECCCCeEEEEEec------C-------CCccceEECCCCCEEEEEecCcCCCcEEEEECCCC---------
Confidence 1111111222222211111000 0 01123567777677666665 7899999999988
Q ss_pred CcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeE-EeccCcceeEEEeccc
Q 037120 426 NEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTI-VAGTKNSSLLVVSQKQ 479 (489)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i-~sgs~dg~i~v~~~~~ 479 (489)
+.+..+. .| ..+.+++|+|+++.| ++++.|+.|.+|..+.
T Consensus 235 -~~~~~~~------------~~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 235 -KITARIP------------VG-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp -EEEEEEE------------CC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred -eEEEEEe------------cC-CCccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 6665555 44 357999999999866 7889999999998664
No 113
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.94 E-value=7.5e-25 Score=215.47 Aligned_cols=176 Identities=16% Similarity=0.239 Sum_probs=137.6
Q ss_pred cccCCCceeEEEECCCCc-EEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 92 RSFGKPGISALDFDCKGI-YLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~-~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
+..+...|.+++|+|++. +|++|+.||.|+|||+........ .......+.+|... |.+++|+|++..+
T Consensus 177 ~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~-------~~~~~~~~~~h~~~---v~~v~~~p~~~~~ 246 (430)
T 2xyi_A 177 LRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHR-------VIDAKNIFTGHTAV---VEDVAWHLLHESL 246 (430)
T ss_dssp EECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGG-------EEECSEEECCCSSC---EEEEEECSSCTTE
T ss_pred ecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCc-------eeccceeecCCCCC---EeeeEEeCCCCCE
Confidence 345666799999999998 999999999999999987322110 11112233456666 9999999977779
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCcee
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLE 250 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 250 (489)
|++++.| |.|++||++..... ..... +..|...|++++|+|+++.+|++|+.||.|++||+++... .+.
T Consensus 247 l~s~~~d-g~i~i~d~~~~~~~-----~~~~~----~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~-~~~ 315 (430)
T 2xyi_A 247 FGSVADD-QKLMIWDTRNNNTS-----KPSHT----VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL-KLH 315 (430)
T ss_dssp EEEEETT-SEEEEEETTCSCSS-----SCSEE----EECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS-CSE
T ss_pred EEEEeCC-CeEEEEECCCCCCC-----cceeE----eecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC-CeE
Confidence 9999888 99999999643211 11111 2568899999999999987899999999999999998543 355
Q ss_pred eccCCCCceeEEEEeecCC-EEEEEeCCCeEEEEEcCCC
Q 037120 251 LSTGSHGTLNSIQLHAENQ-IIFAAGKHGSIYLWDLRGG 288 (489)
Q Consensus 251 ~~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~lwd~~~~ 288 (489)
.+..|...|.+++|+|+++ ++++++.||.|++||++..
T Consensus 316 ~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 316 SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp EEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGT
T ss_pred EeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCC
Confidence 6668999999999999996 5788888999999999873
No 114
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.93 E-value=7e-24 Score=210.72 Aligned_cols=276 Identities=14% Similarity=0.134 Sum_probs=196.9
Q ss_pred cccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCC-CCCE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLA-NQDE 170 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~-~~~~ 170 (489)
+..|...|.+++|++++ +|++|+.||+|+|||+.+..... .+.+|... |.+++|++. ....
T Consensus 158 ~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~--------------~~~~h~~~---v~~l~~~~~~~~~~ 219 (464)
T 3v7d_B 158 LSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTH--------------VFEGHNST---VRCLDIVEYKNIKY 219 (464)
T ss_dssp ECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEE--------------EECCCSSC---EEEEEEEESSSCEE
T ss_pred EeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEE--------------EECCCCCc---cEEEEEecCCCCCE
Confidence 45677889999999998 99999999999999999854443 12345555 999999953 2357
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeee-----------eceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEE
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLK-----------TRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIW 239 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~-----------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iw 239 (489)
+++++.| |+|++||+............ ....+...+.+|...|.++ ++++. ++++++.|+.|++|
T Consensus 220 l~s~s~d-~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~-~l~~~~~d~~i~vw 295 (464)
T 3v7d_B 220 IVTGSRD-NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGN-IVVSGSYDNTLIVW 295 (464)
T ss_dssp EEEEETT-SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETT-EEEEEETTSCEEEE
T ss_pred EEEEcCC-CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCC-EEEEEeCCCeEEEE
Confidence 8888888 99999999654322100000 0000133457899999887 56677 99999999999999
Q ss_pred ECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceee
Q 037120 240 DRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGT 319 (489)
Q Consensus 240 d~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~ 319 (489)
|+++++ ++..+.+|...|.+++|+|+++++++|+.||.|++||+++++.+..+.+|... |.+++|++ ..+++
T Consensus 296 d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~~--~~l~s 367 (464)
T 3v7d_B 296 DVAQMK--CLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL----VGLLRLSD--KFLVS 367 (464)
T ss_dssp ETTTTE--EEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEEEEECS--SEEEE
T ss_pred ECCCCc--EEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCc----EEEEEEcC--CEEEE
Confidence 999876 66677799999999999999999999999999999999999999999999877 99999984 44432
Q ss_pred cccc---------------ceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCcccccc
Q 037120 320 LKAQ---------------SKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQL 384 (489)
Q Consensus 320 ~~~~---------------~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (489)
.... ...+...+..+.+++++..+++++ + +-..+++..++......... .. .
T Consensus 368 ~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-d-g~i~iwd~~~g~~~~~~~~~-----~~------~ 434 (464)
T 3v7d_B 368 AAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-E-NQFNIYNLRSGKLVHANILK-----DA------D 434 (464)
T ss_dssp EETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-T-TEEEEEETTTCCEEESCTTT-----TC------S
T ss_pred EeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-C-CeEEEEECCCCcEEehhhcc-----CC------C
Confidence 1111 111234566778899998887766 4 33456666666554321110 00 1
Q ss_pred CCCcceeecCCcEEEEeecCCCcEEEEe
Q 037120 385 HLRKPSWLSTNSIYAVGSSSDHGIHLLD 412 (489)
Q Consensus 385 ~~~~~~~~~~~~~~l~sgs~d~~i~vwd 412 (489)
.+..++|. +..++++++.|+.+.+|-
T Consensus 435 ~v~~v~~~--~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 435 QIWSVNFK--GKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp EEEEEEEE--TTEEEEEEEETTEEEEEE
T ss_pred cEEEEEec--CCEEEEEEEeCCeEEEEE
Confidence 12334453 678888888888665543
No 115
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.93 E-value=1.4e-24 Score=206.46 Aligned_cols=261 Identities=10% Similarity=-0.018 Sum_probs=170.8
Q ss_pred cCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEE
Q 037120 150 LHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIA 229 (489)
Q Consensus 150 ~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 229 (489)
+|... |.+++|+|++. +|++++.| |.|++||+...... .. ... ..+|...|++++|+|++..+|++
T Consensus 9 ~h~~~---v~~~~~s~~~~-~l~~~~~d-~~v~iw~~~~~~~~--~~---~~~----~~~~~~~v~~~~~~~~~~~~l~~ 74 (342)
T 1yfq_A 9 APKDY---ISDIKIIPSKS-LLLITSWD-GSLTVYKFDIQAKN--VD---LLQ----SLRYKHPLLCCNFIDNTDLQIYV 74 (342)
T ss_dssp CCSSC---EEEEEEEGGGT-EEEEEETT-SEEEEEEEETTTTE--EE---EEE----EEECSSCEEEEEEEESSSEEEEE
T ss_pred CCCCc---EEEEEEcCCCC-EEEEEcCC-CeEEEEEeCCCCcc--cc---cee----eeecCCceEEEEECCCCCcEEEE
Confidence 35555 99999999976 77778877 99999999543211 11 111 24688999999999986436899
Q ss_pred EeCCCcEEEEEC-CCCCcCceeeccC--CCCceeEEEEeecCCEEEEEeCCCeEEEEEcCC---------CcccceeecC
Q 037120 230 SDTHGVVNIWDR-RVGVLPSLELSTG--SHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRG---------GRTSAPFHNH 297 (489)
Q Consensus 230 ~s~dg~i~iwd~-~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~---------~~~~~~~~~~ 297 (489)
++.||.|++||+ .+++ ...+.+ |...|.+++|+| +.++++++.|+.|++||+++ ++.+..+. |
T Consensus 75 ~~~dg~i~~wd~~~~~~---~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~ 149 (342)
T 1yfq_A 75 GTVQGEILKVDLIGSPS---FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-V 149 (342)
T ss_dssp EETTSCEEEECSSSSSS---EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-S
T ss_pred EcCCCeEEEEEeccCCc---eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-e
Confidence 999999999999 7765 245567 999999999999 99999999999999999997 66666665 5
Q ss_pred CccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeec-cceeeecCCCCCCcCC
Q 037120 298 KEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYN-SRVSHVHCPPPAWLSD 376 (489)
Q Consensus 298 ~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~-~~~~~~~~~~~~~~~~ 376 (489)
... |.+++|++++ +.. ++.+ +-..+++... +...... ....
T Consensus 150 ~~~----v~~~~~~~~~--l~~--------------------------~~~d-~~i~i~d~~~~~~~~~~~-----~~~~ 191 (342)
T 1yfq_A 150 KNK----IFTMDTNSSR--LIV--------------------------GMNN-SQVQWFRLPLCEDDNGTI-----EESG 191 (342)
T ss_dssp CCC----EEEEEECSSE--EEE--------------------------EEST-TEEEEEESSCCTTCCCEE-----EECS
T ss_pred CCc----eEEEEecCCc--EEE--------------------------EeCC-CeEEEEECCcccccccee-----eecC
Confidence 555 8888887765 221 1111 1111222221 1100000 0000
Q ss_pred CCccccccCCCcceeec-CCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEE
Q 037120 377 SNNSADQLHLRKPSWLS-TNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACV 455 (489)
Q Consensus 377 ~~~~~~~~~~~~~~~~~-~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va 455 (489)
....+..++|+| + +.++++|+.|+.|++||+....... ..+....+... . ....-.+|...|++++
T Consensus 192 -----~~~~i~~i~~~~~~-~~~l~~~~~dg~i~i~~~~~~~~~~----~~~~~~~~~~~--~-~~~~~~~~~~~i~~~~ 258 (342)
T 1yfq_A 192 -----LKYQIRDVALLPKE-QEGYACSSIDGRVAVEFFDDQGDDY----NSSKRFAFRCH--R-LNLKDTNLAYPVNSIE 258 (342)
T ss_dssp -----CSSCEEEEEECSGG-GCEEEEEETTSEEEEEECCTTCCST----TCTTCEEEECC--C-CCTTCCSSCCCEEEEE
T ss_pred -----CCCceeEEEECCCC-CCEEEEEecCCcEEEEEEcCCCccc----ccccceeeecc--c-ccccccccceeEEEEE
Confidence 001223456666 4 5677888899999999997640000 00112222200 0 0000013556999999
Q ss_pred eeCCCCeEEeccCcceeEEEecccc
Q 037120 456 THPLNNTIVAGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 456 ~~p~~~~i~sgs~dg~i~v~~~~~~ 480 (489)
|+|++.+|++|+.||.|.||..+..
T Consensus 259 ~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 259 FSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp ECTTTCCEEEEETTSCEEEEETTTT
T ss_pred EcCCCCEEEEecCCceEEEEcCccH
Confidence 9999999999999999999987643
No 116
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.93 E-value=3.5e-24 Score=205.47 Aligned_cols=262 Identities=8% Similarity=0.095 Sum_probs=168.2
Q ss_pred ccCCCCCCceeEEEeeCCC--CCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcE
Q 037120 149 LLHIPLPQQLDAVRWNLAN--QDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSR 226 (489)
Q Consensus 149 ~~h~~~~~~V~~v~~~~~~--~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 226 (489)
.+|... |++++|+|++ ..+|++++.| |.|++||+.... ..+ ...+.+|...|++++|+|++. +
T Consensus 36 ~~h~~~---v~~~~~~~~~~~g~~l~~~~~d-g~i~iw~~~~~~----~~~------~~~~~~h~~~v~~~~~~~~~~-~ 100 (368)
T 3mmy_A 36 SSPDDS---IGCLSFSPPTLPGNFLIAGSWA-NDVRCWEVQDSG----QTI------PKAQQMHTGPVLDVCWSDDGS-K 100 (368)
T ss_dssp SCCSSC---EEEEEECCTTSSSEEEEEEETT-SEEEEEEECTTS----CEE------EEEEEECSSCEEEEEECTTSS-E
T ss_pred cCCCCc---eEEEEEcCCCCCceEEEEECCC-CcEEEEEcCCCC----cee------EEEeccccCCEEEEEECcCCC-E
Confidence 456666 9999999995 3588888888 999999994311 111 122367999999999999999 9
Q ss_pred EEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEE--eecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCC
Q 037120 227 LIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQL--HAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLP 304 (489)
Q Consensus 227 l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~--~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~ 304 (489)
|++++.||.|++||+++++ +.. ...|...|.+++| +|++.++++++.||.|++||+++++.+..+..+. .
T Consensus 101 l~s~~~dg~v~iwd~~~~~--~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~---- 172 (368)
T 3mmy_A 101 VFTASCDKTAKMWDLSSNQ--AIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-R---- 172 (368)
T ss_dssp EEEEETTSEEEEEETTTTE--EEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-C----
T ss_pred EEEEcCCCcEEEEEcCCCC--cee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-C----
Confidence 9999999999999999876 443 4579999999999 8899999999999999999999998888877653 3
Q ss_pred eeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCcccccc
Q 037120 305 LTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQL 384 (489)
Q Consensus 305 v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (489)
+.++.+.++...++... + .+..+..+..-..............
T Consensus 173 ~~~~~~~~~~~~~~~~~------------------~-~i~~~~~~~~~~~~~~~~~~~~~~~------------------ 215 (368)
T 3mmy_A 173 CYCADVIYPMAVVATAE------------------R-GLIVYQLENQPSEFRRIESPLKHQH------------------ 215 (368)
T ss_dssp EEEEEEETTEEEEEEGG------------------G-CEEEEECSSSCEEEEECCCSCSSCE------------------
T ss_pred ceEEEecCCeeEEEeCC------------------C-cEEEEEeccccchhhhccccccCCC------------------
Confidence 55555554322211100 0 0111111100000000000000000
Q ss_pred CCCcceeecC---CcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCC
Q 037120 385 HLRKPSWLST---NSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNN 461 (489)
Q Consensus 385 ~~~~~~~~~~---~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~ 461 (489)
....+.+. ....+++|+.|+.|++||+...... ..+..+.............+|...|++++|+|++.
T Consensus 216 --~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 286 (368)
T 3mmy_A 216 --RCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPA-------KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHG 286 (368)
T ss_dssp --EEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHH-------HHSEEEECSEEC----CCCEEECCEEEEEECTTTC
T ss_pred --ceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcc-------ccceeeeeeecccccccccccccceEEEEEecCCC
Confidence 00111111 1344888999999999999876100 01111220000000000113444899999999999
Q ss_pred eEEeccCcceeEEEeccc
Q 037120 462 TIVAGTKNSSLLVVSQKQ 479 (489)
Q Consensus 462 ~i~sgs~dg~i~v~~~~~ 479 (489)
+|++|+.||.|.||..+.
T Consensus 287 ~l~s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 287 TLATVGSDGRFSFWDKDA 304 (368)
T ss_dssp CEEEEETTSCEEEEETTT
T ss_pred EEEEEccCCeEEEEECCC
Confidence 999999999999998764
No 117
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.93 E-value=3e-24 Score=204.09 Aligned_cols=226 Identities=13% Similarity=0.147 Sum_probs=166.2
Q ss_pred ccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEec--CCCcE
Q 037120 149 LLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSA--VNTSR 226 (489)
Q Consensus 149 ~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~ 226 (489)
.+|... |++++|+|++. +|++++.| |.|++||+...... . .....+.+|...|++++|+| ++. +
T Consensus 8 ~gH~~~---v~~~~~~~~~~-~l~~~~~d-g~i~iw~~~~~~~~----~----~~~~~~~~~~~~v~~~~~~~~~d~~-~ 73 (351)
T 3f3f_A 8 SGHDDL---VHDVVYDFYGR-HVATCSSD-QHIKVFKLDKDTSN----W----ELSDSWRAHDSSIVAIDWASPEYGR-I 73 (351)
T ss_dssp CCCSSC---EEEEEECSSSS-EEEEEETT-SEEEEEEECSSSCC----E----EEEEEEECCSSCEEEEEECCGGGCS-E
T ss_pred cccccc---eeEEEEcCCCC-EEEEeeCC-CeEEEEECCCCCCc----c----eecceeccCCCcEEEEEEcCCCCCC-E
Confidence 457666 99999999986 78888888 99999999543211 1 12233478999999999999 477 9
Q ss_pred EEEEeCCCcEEEEECCCCCc-------CceeeccCCCCceeEEEEeec--CCEEEEEeCCCeEEEEEcCCCcccceeecC
Q 037120 227 LIASDTHGVVNIWDRRVGVL-------PSLELSTGSHGTLNSIQLHAE--NQIIFAAGKHGSIYLWDLRGGRTSAPFHNH 297 (489)
Q Consensus 227 l~s~s~dg~i~iwd~~~~~~-------~~~~~~~~h~~~v~~~~~~p~--~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~ 297 (489)
|++++.||.|++||+++++. ..+..+..|...|.+++|+|+ +.++++++.||.|++||+++++.+..+...
T Consensus 74 l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 153 (351)
T 3f3f_A 74 IASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLT 153 (351)
T ss_dssp EEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEE
T ss_pred EEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccc
Confidence 99999999999999998642 135566689999999999999 999999999999999999998765554421
Q ss_pred CccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCC
Q 037120 298 KEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDS 377 (489)
Q Consensus 298 ~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (489)
. . +..+.+.+ ..+...+..+.++|+..
T Consensus 154 ~-~----~~~~~~~~------------~~~~~~~~~~~~~p~~~------------------------------------ 180 (351)
T 3f3f_A 154 S-E----MKVLSIPP------------ANHLQSDFCLSWCPSRF------------------------------------ 180 (351)
T ss_dssp E-E----EESCSCCC------------SSCSCCCEEEEECCCSS------------------------------------
T ss_pred c-c----cccccccc------------CCcccceeEEEeccCCC------------------------------------
Confidence 1 0 11111111 11222334444443310
Q ss_pred CccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcc--cchhhHhhhhcccCCcccCCCceEEEE
Q 037120 378 NNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNED--IESLSERTKLKKENRFVPLSEGVTACV 455 (489)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~h~~~V~~va 455 (489)
.+.++++++.|+.+.+|+...+ +. +..+. +|...|++++
T Consensus 181 -----------------~~~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~------------~h~~~i~~~~ 221 (351)
T 3f3f_A 181 -----------------SPEKLAVSALEQAIIYQRGKDG----------KLHVAAKLP------------GHKSLIRSIS 221 (351)
T ss_dssp -----------------SCCEEEEEETTEEEEEEECTTS----------CEEEEEECC------------CCCSCEEEEE
T ss_pred -----------------CCcEEEEecCCCcEEEEccCCC----------ceeeeeecC------------CCCcceeEEE
Confidence 1456777889999988877665 32 33444 8999999999
Q ss_pred eeCCC----CeEEeccCcceeEEEecccc
Q 037120 456 THPLN----NTIVAGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 456 ~~p~~----~~i~sgs~dg~i~v~~~~~~ 480 (489)
|+|++ .+|++|+.||.|.||..+..
T Consensus 222 ~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 222 WAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp ECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred ECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 99998 89999999999999987654
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=1.6e-25 Score=217.41 Aligned_cols=118 Identities=13% Similarity=0.134 Sum_probs=90.1
Q ss_pred CCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEec--------CCCcEEEEEeCCCcEEEE
Q 037120 168 QDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSA--------VNTSRLIASDTHGVVNIW 239 (489)
Q Consensus 168 ~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--------~~~~~l~s~s~dg~i~iw 239 (489)
..++++++.| ++|+|||+.... .. .......+.+|.+.|++++|+| +++ +|++++.|++|+||
T Consensus 101 ~~~las~~~d-~~v~lw~~~~~~-----~~--~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~-~las~s~D~tv~~W 171 (393)
T 4gq1_A 101 SLFLACVCQD-NTVRLIITKNET-----II--TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ-VIASVGDDCTLIIW 171 (393)
T ss_dssp EEEEEEEETT-SCEEEEEEETTE-----EE--EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE-EEEEEETTSEEEEE
T ss_pred CCEEEEEeCC-CcEEEEECCCCc-----cc--eeeeecccCCCCCceEEEEEccccccccCCCCC-EEEEEECCCeEEEE
Confidence 3478899988 999999994331 11 1112344689999999999998 677 99999999999999
Q ss_pred ECCCCCcCceeeccCCCCceeEEEEeecCC-EEEEEeCCCeEEEEEcCCCcccceeec
Q 037120 240 DRRVGVLPSLELSTGSHGTLNSIQLHAENQ-IIFAAGKHGSIYLWDLRGGRTSAPFHN 296 (489)
Q Consensus 240 d~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~lwd~~~~~~~~~~~~ 296 (489)
|++++. .......|...|.+++|+|++. +|++++.||+|++||+++++.......
T Consensus 172 d~~~~~--~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~ 227 (393)
T 4gq1_A 172 RLTDEG--PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQ 227 (393)
T ss_dssp EEETTE--EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-------
T ss_pred ECCCCc--eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccc
Confidence 998765 4445568889999999999875 788888999999999999876544443
No 119
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.93 E-value=8.9e-24 Score=198.64 Aligned_cols=248 Identities=13% Similarity=0.155 Sum_probs=169.4
Q ss_pred ccCCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEE
Q 037120 93 SFGKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVA 172 (489)
Q Consensus 93 ~~~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~ 172 (489)
..+...|++++|+|+|++||+|+.||+|+|||+++.+.... +.+|... +.++.+.+ .+++
T Consensus 64 ~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~--------------~~~h~~~---~~~~~~~~---~~l~ 123 (318)
T 4ggc_A 64 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN--------------MTSHSAR---VGSLSWNS---YILS 123 (318)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE--------------EECCSSC---EEEEEEET---TEEE
T ss_pred cCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE--------------ecCccce---EEEeecCC---CEEE
Confidence 34556699999999999999999999999999998655441 2345544 66666654 3888
Q ss_pred EEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcC--cee
Q 037120 173 CASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLP--SLE 250 (489)
Q Consensus 173 s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~--~~~ 250 (489)
+++.+ +.+++|+...... ....+.+|...+..+.|.+++. +|++++.|+.|++||+++++.. ...
T Consensus 124 s~~~~-~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~ 190 (318)
T 4ggc_A 124 SGSRS-GHIHHHDVRVAEH-----------HVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQ 190 (318)
T ss_dssp EEETT-SEEEEEETTSSSC-----------EEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEESSCBTTBSCCSE
T ss_pred EEecC-CceEeeecCCCce-----------eEEEEcCccCceEEEEEcCCCC-EEEEEecCcceeEEECCCCccccccee
Confidence 88888 9999999843211 1222377999999999999999 9999999999999999986533 233
Q ss_pred eccCCCCceeEEEEeecCCEEE---EEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceee
Q 037120 251 LSTGSHGTLNSIQLHAENQIIF---AAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIV 327 (489)
Q Consensus 251 ~~~~h~~~v~~~~~~p~~~~l~---~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~ 327 (489)
....|.+.|.+++++|++..++ +++.+++|++||.+......... +... +..+.|++++..+....
T Consensus 191 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~----v~~~~~~~~~~~~~~~s------ 259 (318)
T 4ggc_A 191 TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQ----VCSILWSPHYKELISGH------ 259 (318)
T ss_dssp EECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSC----EEEEEEETTTTEEEEEE------
T ss_pred eecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceee----eeeeeecccccceEEEE------
Confidence 4457788999999999877544 33459999999999876544433 3333 77777777665543210
Q ss_pred ccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCc
Q 037120 328 SQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHG 407 (489)
Q Consensus 328 ~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~ 407 (489)
-+.++ .+..+..... ..+..+.+|...+.+ ++|+|+ +.+|++||.|++
T Consensus 260 --------g~~d~-~i~iwd~~~~--~~~~~l~gH~~~V~~--------------------l~~spd-g~~l~S~s~D~~ 307 (318)
T 4ggc_A 260 --------GFAQN-QLVIWKYPTM--AKVAELKGHTSRVLS--------------------LTMSPD-GATVASAAADET 307 (318)
T ss_dssp --------CTTTC-CEEEEETTTC--CEEEEECCCSSCEEE--------------------EEECTT-SSCEEEEETTTE
T ss_pred --------EcCCC-EEEEEECCCC--cEEEEEcCCCCCEEE--------------------EEEcCC-CCEEEEEecCCe
Confidence 00011 1111111110 123333444433333 455555 567889999999
Q ss_pred EEEEeccCC
Q 037120 408 IHLLDFFPG 416 (489)
Q Consensus 408 i~vwd~~~~ 416 (489)
|+|||+...
T Consensus 308 v~iWd~~~~ 316 (318)
T 4ggc_A 308 LRLWRCFEL 316 (318)
T ss_dssp EEEECCSCC
T ss_pred EEEEECCCC
Confidence 999999754
No 120
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.8e-23 Score=206.95 Aligned_cols=277 Identities=14% Similarity=0.109 Sum_probs=180.8
Q ss_pred cccCCCceeEEEECCCCcEE-EEEecCCeEEEEeCC--CcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCC
Q 037120 92 RSFGKPGISALDFDCKGIYL-VSATRSGCLTVHDFE--SLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQ 168 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~l-a~g~~dg~i~vwd~~--~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~ 168 (489)
...+...|.+++|+|+|++| |+|+.||.|+|||+. +..... .+. ...|... |.+++|+|++.
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~--------~~~----~~~~~~~---v~~~~~sp~~~ 162 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLK--------LRK----RFCFSKR---PNAISIAEDDT 162 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEE--------EEE----EEECSSC---EEEEEECTTSS
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceee--------eee----cccCCCC---ceEEEEcCCCC
Confidence 44556679999999999996 899999999999998 533322 111 0123334 99999999986
Q ss_pred CEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecC---CCcEEEEEeCCCcEEEEECCCCC
Q 037120 169 DEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAV---NTSRLIASDTHGVVNIWDRRVGV 245 (489)
Q Consensus 169 ~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~~l~s~s~dg~i~iwd~~~~~ 245 (489)
.|++++.+ |.|++|++...... . .....+.+|...|++++|+|+ +. +|++++.|+.|++||+++++
T Consensus 163 -~l~~~~~~-g~v~~~~~~~~~~~-----~---~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~~~ 231 (450)
T 2vdu_B 163 -TVIIADKF-GDVYSIDINSIPEE-----K---FTQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQCF 231 (450)
T ss_dssp -EEEEEETT-SEEEEEETTSCCCS-----S---CCCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESCTT
T ss_pred -EEEEEeCC-CcEEEEecCCcccc-----c---ccceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCCCc
Confidence 77788877 99999999543211 0 011123678999999999999 77 99999999999999999876
Q ss_pred cCceee-ccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCC--Ccceeeccc
Q 037120 246 LPSLEL-STGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASM--LEKIGTLKA 322 (489)
Q Consensus 246 ~~~~~~-~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~i~~~~~ 322 (489)
++.. ..+|...|.+++|+ ++.+|++++.|+.|++||+++++.+..+..+.. +..+.+... ...+ ...
T Consensus 232 --~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~ 301 (450)
T 2vdu_B 232 --IVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSL-----IKPYLNDQHLAPPRF--QNE 301 (450)
T ss_dssp --CEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHH-----HGGGCCTTSBC---------
T ss_pred --eeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhh-----hhhhhhhcccccccc--ccc
Confidence 4444 55899999999999 999999999999999999999988777654321 110000000 0000 001
Q ss_pred cceeeccceeEEEeCCCCCeEEEEEecCCceEEEEe--eccc-eeeecCCCCCCcCCCCccccccCCCcceeecCCcEEE
Q 037120 323 QSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDV--YNSR-VSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYA 399 (489)
Q Consensus 323 ~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 399 (489)
........|..+.++|++.++++.+..++-..++++ ..+. ...+.... .. ..+..++|.| ++.++
T Consensus 302 ~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~----~~-------~~v~~~~~~~-~~~~v 369 (450)
T 2vdu_B 302 NNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIIT----FP-------YNVISLSAHN-DEFQV 369 (450)
T ss_dssp ---CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEE----CS-------SCEEEEEEET-TEEEE
T ss_pred ccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEec----cC-------CceEEEEecC-CcEEE
Confidence 111223456778888888877777644443445555 2221 11110000 00 1124467777 45666
Q ss_pred EeecC------CCcEEEEeccCC
Q 037120 400 VGSSS------DHGIHLLDFFPG 416 (489)
Q Consensus 400 ~sgs~------d~~i~vwd~~~~ 416 (489)
+.++. ++.|.+|.+...
T Consensus 370 ~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 370 TLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EECCTTCCSSCCCSEEEEEEETT
T ss_pred EEecccCCCCCCcceEEEEEEcC
Confidence 65553 556899988654
No 121
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.93 E-value=2e-23 Score=206.25 Aligned_cols=264 Identities=12% Similarity=0.183 Sum_probs=190.6
Q ss_pred ccccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcE
Q 037120 147 KHLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSR 226 (489)
Q Consensus 147 ~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 226 (489)
.+.+|.... +.++.++ + ..+++++.| |+|++||+..+ . ....+.+|...|.+++|+ +. .
T Consensus 113 ~l~~h~~~v--~~~~~~~--g-~~l~sg~~d-g~i~vwd~~~~-----~-------~~~~~~~h~~~v~~~~~~--~~-~ 171 (445)
T 2ovr_B 113 VLKGHDDHV--ITCLQFC--G-NRIVSGSDD-NTLKVWSAVTG-----K-------CLRTLVGHTGGVWSSQMR--DN-I 171 (445)
T ss_dssp EEECSTTSC--EEEEEEE--T-TEEEEEETT-SCEEEEETTTC-----C-------EEEECCCCSSCEEEEEEE--TT-E
T ss_pred EecccCCCc--EEEEEEc--C-CEEEEEECC-CcEEEEECCCC-----c-------EEEEEcCCCCCEEEEEec--CC-E
Confidence 345676642 4666665 4 388888888 99999999432 1 122347899999999997 45 8
Q ss_pred EEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCee
Q 037120 227 LIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLT 306 (489)
Q Consensus 227 l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~ 306 (489)
+++++.||.|++||+.+++ ++..+.+|...|.+++|+ +..+++++.||.|++||+++++.+..+.+|... |.
T Consensus 172 l~s~~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~----v~ 243 (445)
T 2ovr_B 172 IISGSTDRTLKVWNAETGE--CIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAA----VR 243 (445)
T ss_dssp EEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSC----EE
T ss_pred EEEEeCCCeEEEEECCcCc--EEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCccc----EE
Confidence 9999999999999999876 666777999999999995 678999999999999999999999999998877 99
Q ss_pred EEEeCCCCcceeecc----------------ccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCC
Q 037120 307 SLKLASMLEKIGTLK----------------AQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPP 370 (489)
Q Consensus 307 ~l~~~~~~~~i~~~~----------------~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 370 (489)
+++| ++..+++.. .....+...|.++.+ ++.++++++.++. ..+++...+.........
T Consensus 244 ~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~~ 318 (445)
T 2ovr_B 244 CVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS-IRVWDVETGNCIHTLTGH 318 (445)
T ss_dssp EEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSC-EEEEETTTCCEEEEECCC
T ss_pred EEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCe-EEEEECCCCCEEEEEcCC
Confidence 9999 455553211 112234567888888 6777777776654 234444444332221110
Q ss_pred CCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCc
Q 037120 371 PAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEG 450 (489)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 450 (489)
.. ...++.++ +.++++|+.|+.|++||+.++ +.+..+.. ...|...
T Consensus 319 ~~--------------~v~~~~~~-~~~l~~~~~dg~i~vwd~~~~----------~~~~~~~~---------~~~~~~~ 364 (445)
T 2ovr_B 319 QS--------------LTSGMELK-DNILVSGNADSTVKIWDIKTG----------QCLQTLQG---------PNKHQSA 364 (445)
T ss_dssp CS--------------CEEEEEEE-TTEEEEEETTSCEEEEETTTC----------CEEEEECS---------TTSCSSC
T ss_pred cc--------------cEEEEEEe-CCEEEEEeCCCeEEEEECCCC----------cEEEEEcc---------CCCCCCC
Confidence 00 00111222 558889999999999999888 66655540 0138899
Q ss_pred eEEEEeeCCCCeEEeccCcceeEEEecccc
Q 037120 451 VTACVTHPLNNTIVAGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 451 V~~va~~p~~~~i~sgs~dg~i~v~~~~~~ 480 (489)
|++++|+ +.+|++|+.||.|.||..+..
T Consensus 365 v~~~~~~--~~~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 365 VTCLQFN--KNFVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp EEEEEEC--SSEEEEEETTSEEEEEETTTC
T ss_pred EEEEEEC--CCEEEEEeCCCeEEEEECCCC
Confidence 9999996 579999999999999986543
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.92 E-value=7.5e-23 Score=198.43 Aligned_cols=242 Identities=10% Similarity=0.010 Sum_probs=164.3
Q ss_pred CCceeEEEECCCCcEE-EEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEE
Q 037120 96 KPGISALDFDCKGIYL-VSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACA 174 (489)
Q Consensus 96 ~~~V~~~~fs~~g~~l-a~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~ 174 (489)
...+.+++|+|+|++| ++++.|+.|++||+.+.+.... . ..+. .|.+++|+|++..+++++
T Consensus 31 ~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~--------~------~~~~----~v~~~~~spdg~~l~~~~ 92 (391)
T 1l0q_A 31 GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIAT--------V------PAGS----SPQGVAVSPDGKQVYVTN 92 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEE--------E------ECSS----SEEEEEECTTSSEEEEEE
T ss_pred CCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEE--------E------ECCC----CccceEECCCCCEEEEEE
Confidence 3458999999999977 6777899999999988554431 1 1111 289999999998666777
Q ss_pred ecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccC
Q 037120 175 STRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTG 254 (489)
Q Consensus 175 ~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 254 (489)
+.+ +.|++||+... +.+... . +...+.+++|+|+++.++++++.|+.|++||+++++ ....+..
T Consensus 93 ~~~-~~v~v~d~~~~-----~~~~~~-------~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~--~~~~~~~ 156 (391)
T 1l0q_A 93 MAS-STLSVIDTTSN-----TVAGTV-------K-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA--VINTVSV 156 (391)
T ss_dssp TTT-TEEEEEETTTT-----EEEEEE-------E-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE--EEEEEEC
T ss_pred CCC-CEEEEEECCCC-----eEEEEE-------e-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc--EEEEEec
Confidence 666 99999999432 222111 1 334789999999998344788899999999999876 4444444
Q ss_pred CCCceeEEEEeecCCEEE-EEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceeeccceeE
Q 037120 255 SHGTLNSIQLHAENQIIF-AAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHS 333 (489)
Q Consensus 255 h~~~v~~~~~~p~~~~l~-~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~ 333 (489)
+ ..+.+++|+|++++++ +++.|+.|++||+++++.+..+.. ... +.+++|+|++..+..
T Consensus 157 ~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~----~~~~~~~~~g~~l~~-------------- 216 (391)
T 1l0q_A 157 G-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV-EAA----PSGIAVNPEGTKAYV-------------- 216 (391)
T ss_dssp C-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSE----EEEEEECTTSSEEEE--------------
T ss_pred C-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec-CCC----ccceEECCCCCEEEE--------------
Confidence 4 5679999999999885 555699999999999876655553 333 667777776655532
Q ss_pred EEeCCCCCeEEEEEe--cCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEE
Q 037120 334 IDLDPSCSYQLAFHL--DDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLL 411 (489)
Q Consensus 334 ~~~~p~~~~~~~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vw 411 (489)
... .++-..+++...+........ . .....+.|+|++..++++++.|+.|++|
T Consensus 217 ------------~~~~~~~~~v~~~d~~~~~~~~~~~~------~-------~~~~~~~~s~dg~~l~~s~~~d~~v~v~ 271 (391)
T 1l0q_A 217 ------------TNVDKYFNTVSMIDTGTNKITARIPV------G-------PDPAGIAVTPDGKKVYVALSFXNTVSVI 271 (391)
T ss_dssp ------------EEECSSCCEEEEEETTTTEEEEEEEC------C-------SSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ------------EecCcCCCcEEEEECCCCeEEEEEec------C-------CCccEEEEccCCCEEEEEcCCCCEEEEE
Confidence 221 111111222222221111100 0 0112357788878888899999999999
Q ss_pred eccCC
Q 037120 412 DFFPG 416 (489)
Q Consensus 412 d~~~~ 416 (489)
|+.++
T Consensus 272 d~~~~ 276 (391)
T 1l0q_A 272 DTATN 276 (391)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 99987
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.92 E-value=7.7e-24 Score=194.69 Aligned_cols=171 Identities=16% Similarity=0.167 Sum_probs=111.3
Q ss_pred ceeEEEECCC----CcEEEEEec--------------------CCeEEEEeCCC-cccccCCCCCCCCCcccccccccCC
Q 037120 98 GISALDFDCK----GIYLVSATR--------------------SGCLTVHDFES-LYYQCNGTLPGVGLKEDQSKHLLHI 152 (489)
Q Consensus 98 ~V~~~~fs~~----g~~la~g~~--------------------dg~i~vwd~~~-~~~~~~~~~~~~g~~~~~~~~~~h~ 152 (489)
.|++++|+|+ ++++++++. |+.|++|++.. ++. .....+|.
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~--------------~~s~~~~~ 178 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGG--------------KENQFLMP 178 (356)
T ss_dssp EEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCE--------------EEEEEECC
T ss_pred ceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCce--------------eeeeccCC
Confidence 5889999999 899988774 55555555532 111 11224566
Q ss_pred CCCCceeEEEeeC--CCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEE---
Q 037120 153 PLPQQLDAVRWNL--ANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRL--- 227 (489)
Q Consensus 153 ~~~~~V~~v~~~~--~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l--- 227 (489)
.. ++.++|++ +...+|++++.| ++|+|||+..+ +.+..... ...|...+.+++|+|++. ++
T Consensus 179 ~~---v~~l~fs~~~g~~~~LaSgS~D-~TIkIWDl~TG-----k~l~tL~g----~~~~v~~v~~vafSpdG~-~lvs~ 244 (356)
T 2w18_A 179 PE---ETILTFAEVQGMQEALLGTTIM-NNIVIWNLKTG-----QLLKKMHI----DDSYQASVCHKAYSEMGL-LFIVL 244 (356)
T ss_dssp CS---SCEEEEEEEETSTTEEEEEETT-SEEEEEETTTC-----CEEEEEEC----CC---CCCEEEEEEETTE-EEEEE
T ss_pred Cc---eeeEEeeccCCCCceEEEecCC-CcEEEEECCCC-----cEEEEEcC----CCcceeeeEEEEECCCCC-EEEEe
Confidence 66 67788887 223588999988 99999999433 22222110 011335788889999998 55
Q ss_pred ---------EEEeCCCcEEEEECCCCCcCceeec-----cCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccce
Q 037120 228 ---------IASDTHGVVNIWDRRVGVLPSLELS-----TGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAP 293 (489)
Q Consensus 228 ---------~s~s~dg~i~iwd~~~~~~~~~~~~-----~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~ 293 (489)
++|+.|++|++||..+++ ++..+ .+|...+.+. +.++.++++++.|++|+|||+.+++++.+
T Consensus 245 s~~~~~w~laSGs~D~tIklWd~~tgk--~l~v~~~~~p~Gh~~~~lsg--~~sg~~lASgS~DgTIkIWDl~tGk~l~t 320 (356)
T 2w18_A 245 SHPCAKESESLRSPVFQLIVINPKTTL--SVGVMLYCLPPGQAGRFLEG--DVKDHCAAAILTSGTIAIWDLLLGQCTAL 320 (356)
T ss_dssp C------------CCEEEEEEETTTTE--EEEEEEECCCTTCCCCEEEE--EEETTEEEEEETTSCEEEEETTTCSEEEE
T ss_pred ccCCCcceeeccCCCcEEEEEECCCCE--EEEEEEeeccCCCcceeEcc--ccCCCEEEEEcCCCcEEEEECCCCcEEEE
Confidence 678899999999999876 33322 3666655444 44488999999999999999999999999
Q ss_pred eecCCcc
Q 037120 294 FHNHKEV 300 (489)
Q Consensus 294 ~~~~~~~ 300 (489)
+.+|...
T Consensus 321 L~gH~~~ 327 (356)
T 2w18_A 321 LPPVSDQ 327 (356)
T ss_dssp ECCC--C
T ss_pred ecCCCCC
Confidence 9887654
No 124
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=7.1e-24 Score=222.96 Aligned_cols=225 Identities=13% Similarity=0.166 Sum_probs=169.3
Q ss_pred ccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecC--CCcE
Q 037120 149 LLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAV--NTSR 226 (489)
Q Consensus 149 ~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~ 226 (489)
.+|... |++++|+|++. .+++++.| |+|+|||+... ... ....+.+|...|++++|+|+ +. +
T Consensus 6 ~gH~~~---V~~l~~s~dg~-~latg~~d-g~I~vwd~~~~------~~~----~~~~l~~h~~~V~~l~~s~~~~~~-~ 69 (753)
T 3jro_A 6 NAHNEL---IHDAVLDYYGK-RLATCSSD-KTIKIFEVEGE------THK----LIDTLTGHEGPVWRVDWAHPKFGT-I 69 (753)
T ss_dssp --CCCC---EEEECCCSSSC-CEEEEETT-TEEEEEEEETT------EEE----EEEEECCCSSCEEEEEECCTTSCS-E
T ss_pred ccCcce---eEEEEECCCCC-eEEEEECC-CcEEEEecCCC------CCc----cceeccCCcCceEEEEecCCCCCC-E
Confidence 456666 99999999986 77788877 99999999421 111 22334889999999999988 77 9
Q ss_pred EEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeec--CCEEEEEeCCCeEEEEEcCCCcc--cceeecCCccCC
Q 037120 227 LIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAE--NQIIFAAGKHGSIYLWDLRGGRT--SAPFHNHKEVCH 302 (489)
Q Consensus 227 l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~l~~~~~dg~i~lwd~~~~~~--~~~~~~~~~~~~ 302 (489)
|++|+.||.|++||+++++........+|...|++++|+|+ +..+++|+.||.|++||++++.. ...+..|...
T Consensus 70 l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~-- 147 (753)
T 3jro_A 70 LASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG-- 147 (753)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSC--
T ss_pred EEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCc--
Confidence 99999999999999998754345566789999999999999 99999999999999999998744 3445566655
Q ss_pred CCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCcccc
Q 037120 303 LPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSAD 382 (489)
Q Consensus 303 ~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (489)
|.+++|+|...... +.. ....+
T Consensus 148 --v~~l~~~p~~~~~~---------------------~~~-----------------------------~~~~d------ 169 (753)
T 3jro_A 148 --VNSASWAPATIEED---------------------GEH-----------------------------NGTKE------ 169 (753)
T ss_dssp --EEEEEECCCC-----------------------------------------------------------CGG------
T ss_pred --eEEEEecCcccccc---------------------ccc-----------------------------ccCCC------
Confidence 77777776421100 000 00111
Q ss_pred ccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCC---
Q 037120 383 QLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPL--- 459 (489)
Q Consensus 383 ~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~--- 459 (489)
+.++++|+.||.|++||+.++... ......+. +|.+.|++++|+|+
T Consensus 170 -------------~~~l~sgs~dg~I~iwd~~~~~~~------~~~~~~~~------------~h~~~V~~l~~sp~~~~ 218 (753)
T 3jro_A 170 -------------SRKFVTGGADNLVKIWKYNSDAQT------YVLESTLE------------GHSDWVRDVAWSPTVLL 218 (753)
T ss_dssp -------------GCCEEEEETTSCEEEEEEETTTTE------EEEEEEEC------------CCSSCEEEEEECCCCSS
T ss_pred -------------CCEEEEEECCCeEEEEeccCCccc------ceeeeeec------------CCCCcEEEEEeccCCCC
Confidence 667889999999999999876100 01122334 89999999999999
Q ss_pred CCeEEeccCcceeEEEecccc
Q 037120 460 NNTIVAGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 460 ~~~i~sgs~dg~i~v~~~~~~ 480 (489)
+..|++|+.||.|.||.....
T Consensus 219 ~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 219 RSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp SEEEEEEESSSCEEEEEESSS
T ss_pred CCEEEEEecCCEEEEecCCCC
Confidence 899999999999999987654
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.90 E-value=3e-22 Score=197.00 Aligned_cols=250 Identities=9% Similarity=0.021 Sum_probs=171.1
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEE
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVN 237 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~ 237 (489)
+.+++|+| +..++++++.+ +.|++||+..+ ....... ...+.+|...|.+++|++++. ++++++.|+.|+
T Consensus 125 ~~~~~~s~-~~~~~~~~~~~-~~i~~~d~~~g-----~~~~~~~--~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~v~ 194 (433)
T 3bws_A 125 PKSVRFID-NTRLAIPLLED-EGMDVLDINSG-----QTVRLSP--PEKYKKKLGFVETISIPEHNE-LWVSQMQANAVH 194 (433)
T ss_dssp BCCCEESS-SSEEEEEBTTS-SSEEEEETTTC-----CEEEECC--CHHHHTTCCEEEEEEEGGGTE-EEEEEGGGTEEE
T ss_pred ceEEEEeC-CCeEEEEeCCC-CeEEEEECCCC-----eEeeecC--cccccccCCceeEEEEcCCCE-EEEEECCCCEEE
Confidence 56799999 44577777766 89999999433 1111111 002257889999999999988 999999999999
Q ss_pred EEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEe-CCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcc
Q 037120 238 IWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAG-KHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEK 316 (489)
Q Consensus 238 iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 316 (489)
+||+++++ .+..+..|...+.+++|+|+++.+++++ .|+.|++||+++++.+..+..+ .. +.+++|+|++..
T Consensus 195 ~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~----~~~~~~~~~g~~ 267 (433)
T 3bws_A 195 VFDLKTLA--YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GL----PRGLLLSKDGKE 267 (433)
T ss_dssp EEETTTCC--EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SE----EEEEEECTTSSE
T ss_pred EEECCCce--EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CC----ceEEEEcCCCCE
Confidence 99999876 5556668889999999999999987666 5999999999998876666543 23 778888887766
Q ss_pred eeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCc
Q 037120 317 IGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNS 396 (489)
Q Consensus 317 i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (489)
+........ .+. . .+..+. +++..++........ . .....++|.|++.
T Consensus 268 l~~~~~~~~----~~~----~-~dg~i~----------~~d~~~~~~~~~~~~------~-------~~~~~~~~~~~g~ 315 (433)
T 3bws_A 268 LYIAQFSAS----NQE----S-GGGRLG----------IYSMDKEKLIDTIGP------P-------GNKRHIVSGNTEN 315 (433)
T ss_dssp EEEEEEESC----TTC----S-CCEEEE----------EEETTTTEEEEEEEE------E-------ECEEEEEECSSTT
T ss_pred EEEEECCCC----ccc----c-CCCeEE----------EEECCCCcEEeeccC------C-------CCcceEEECCCCC
Confidence 543111000 000 0 000111 122111111110000 0 0113356777778
Q ss_pred EEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccC--------
Q 037120 397 IYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTK-------- 468 (489)
Q Consensus 397 ~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~-------- 468 (489)
.++++++.|+.|++||+.++ +.+..+ .+...+.+++|+|++..+++++.
T Consensus 316 ~l~~~~~~~~~v~v~d~~~~----------~~~~~~-------------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 372 (433)
T 3bws_A 316 KIYVSDMCCSKIEVYDLKEK----------KVQKSI-------------PVFDKPNTIALSPDGKYLYVSCRGPNHPTEG 372 (433)
T ss_dssp EEEEEETTTTEEEEEETTTT----------EEEEEE-------------ECSSSEEEEEECTTSSEEEEEECCCCCTTTC
T ss_pred EEEEEecCCCEEEEEECCCC----------cEEEEe-------------cCCCCCCeEEEcCCCCEEEEEecCCCccccc
Confidence 88899999999999999987 555443 36678999999999998877766
Q ss_pred -------cceeEEEeccc
Q 037120 469 -------NSSLLVVSQKQ 479 (489)
Q Consensus 469 -------dg~i~v~~~~~ 479 (489)
||.|.+|..+.
T Consensus 373 ~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 373 YLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp TTSCCSSCCEEEEEETTT
T ss_pred cccccccceEEEEEECCC
Confidence 57999997654
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=2.9e-22 Score=195.76 Aligned_cols=290 Identities=12% Similarity=0.058 Sum_probs=194.7
Q ss_pred ceeEEEECCCC-cEEEEEe----cCC----eEEEEeC--CCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeC-
Q 037120 98 GISALDFDCKG-IYLVSAT----RSG----CLTVHDF--ESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNL- 165 (489)
Q Consensus 98 ~V~~~~fs~~g-~~la~g~----~dg----~i~vwd~--~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~- 165 (489)
.|...+|++.| +++++|+ .|| .|+|||+ .+.+.... ..+.+|... +..+++++
T Consensus 64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~------------~~~~~~~~~---~~~~~~~~~ 128 (415)
T 2hqs_A 64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ------------NSYKVNKQW---LRYAGHTAS 128 (415)
T ss_dssp GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEE------------EEEEECGGG---HHHHHHHHH
T ss_pred CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEee------------eEEEcChhH---HHHHHHHHH
Confidence 46666788877 4666876 467 8999999 77443321 112334333 44455543
Q ss_pred -------------CCCCEEEEEecC-C---CEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEE
Q 037120 166 -------------ANQDEVACASTR-S---NVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLI 228 (489)
Q Consensus 166 -------------~~~~~l~s~~~d-~---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 228 (489)
.+..+++++..+ + +.|++||+... . ... +.+|...|.+++|+|+++ .|+
T Consensus 129 d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~--~-------~~~----l~~~~~~v~~~~~Spdg~-~la 194 (415)
T 2hqs_A 129 DEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGY--N-------QFV----VHRSPQPLMSPAWSPDGS-KLA 194 (415)
T ss_dssp HHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSC--S-------CEE----EEEESSCEEEEEECTTSS-EEE
T ss_pred HHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCC--C-------CEE----EeCCCCcceeeEEcCCCC-EEE
Confidence 133344444321 1 69999999421 1 111 255778999999999999 899
Q ss_pred EEeCCC---cEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEE-EEeCCC--eEEEEEcCCCcccceeecCCccCC
Q 037120 229 ASDTHG---VVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIF-AAGKHG--SIYLWDLRGGRTSAPFHNHKEVCH 302 (489)
Q Consensus 229 s~s~dg---~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-~~~~dg--~i~lwd~~~~~~~~~~~~~~~~~~ 302 (489)
+++.|+ .|++||+++++ +. .+..|...+.+++|+|+|+.|+ +++.|+ .|++||+++++. ..+..|...
T Consensus 195 ~~s~~~~~~~i~~~d~~tg~--~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~-- 268 (415)
T 2hqs_A 195 YVTFESGRSALVIQTLANGA--VR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSN-- 268 (415)
T ss_dssp EEECTTSSCEEEEEETTTCC--EE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSC--
T ss_pred EEEecCCCcEEEEEECCCCc--EE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCc--
Confidence 998775 99999999876 33 3456788999999999999888 555455 599999998765 556666666
Q ss_pred CCeeEEEeCCCCcceeeccc-----c-------------ceeeccceeEEEeCCCCCeEEEEEecCCc--eEEEEeeccc
Q 037120 303 LPLTSLKLASMLEKIGTLKA-----Q-------------SKIVSQEIHSIDLDPSCSYQLAFHLDDGW--SGVLDVYNSR 362 (489)
Q Consensus 303 ~~v~~l~~~~~~~~i~~~~~-----~-------------~~~~~~~i~~~~~~p~~~~~~~~~~~~~w--~~~~~~~~~~ 362 (489)
+.+++|+|+|+.++.... . ...+...+..+.|+|++++++....+++. ..+++..++.
T Consensus 269 --~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 269 --NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp --EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred --ccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 999999999987632110 0 00123457789999999999888876542 2445554444
Q ss_pred eeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCC--cEEEEeccCCCCCCeeeccCcccchhhHhhhhcc
Q 037120 363 VSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDH--GIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKK 440 (489)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (489)
...+... .....++|+|+|..+++++..++ .|++||+..+ ....+.
T Consensus 347 ~~~l~~~--------------~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~-----------~~~~l~------- 394 (415)
T 2hqs_A 347 VQVLSST--------------FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR-----------FKARLP------- 394 (415)
T ss_dssp EEECCCS--------------SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC-----------CEEECC-------
T ss_pred EEEecCC--------------CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC-----------cEEEee-------
Confidence 4322111 02345789999877666655444 7999998754 455666
Q ss_pred cCCcccCCCceEEEEeeCCCC
Q 037120 441 ENRFVPLSEGVTACVTHPLNN 461 (489)
Q Consensus 441 ~~~~~~h~~~V~~va~~p~~~ 461 (489)
+|.+.|.+++|+|...
T Consensus 395 -----~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 395 -----ATDGQVKFPAWSPYLH 410 (415)
T ss_dssp -----CSSSEEEEEEECCCCC
T ss_pred -----CCCCCCcCCccccccc
Confidence 8999999999999764
No 127
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=4e-21 Score=202.29 Aligned_cols=318 Identities=10% Similarity=0.013 Sum_probs=201.4
Q ss_pred CceeEEEECCCCcEEEEEec-CC-----eEEEEeCCCcccccCCCCCCCCCccccc----------c-c--ccCCCCCCc
Q 037120 97 PGISALDFDCKGIYLVSATR-SG-----CLTVHDFESLYYQCNGTLPGVGLKEDQS----------K-H--LLHIPLPQQ 157 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~-dg-----~i~vwd~~~~~~~~~~~~~~~g~~~~~~----------~-~--~~h~~~~~~ 157 (489)
..|.+++|+|||++|++++. |+ .|++||+.+.+...... ..... . . ..+......
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVD------SKVVLPGTETLSDEEKARRERQRIAAMTG 110 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEEC------GGGTC--------------------CCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccc------hhhcccccccccchhhhhhhhhhhccccC
Confidence 45899999999999999998 88 99999998854332100 00000 0 0 000000022
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEE
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVN 237 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~ 237 (489)
|.+++|+|+++ .|++++ .+.|.+||+..+... . .. .+..|...+..++|+|||+ .|+.++ ++.|+
T Consensus 111 v~~~~~SpDg~-~l~~~~--~~~i~~~d~~~~~~~---~---~~----~l~~~~~~~~~~~~SPDG~-~la~~~-~~~i~ 175 (741)
T 2ecf_A 111 IVDYQWSPDAQ-RLLFPL--GGELYLYDLKQEGKA---A---VR----QLTHGEGFATDAKLSPKGG-FVSFIR-GRNLW 175 (741)
T ss_dssp SCCCEECTTSS-EEEEEE--TTEEEEEESSSCSTT---S---CC----BCCCSSSCEEEEEECTTSS-EEEEEE-TTEEE
T ss_pred cceeEECCCCC-EEEEEe--CCcEEEEECCCCCcc---e---EE----EcccCCcccccccCCCCCC-EEEEEe-CCcEE
Confidence 67799999997 566666 389999999543100 0 11 1255677899999999999 888887 56999
Q ss_pred EEECCCCCcCceeeccCCCCc----------------eeEEEEeecCCEEEEEeCCC-----------------------
Q 037120 238 IWDRRVGVLPSLELSTGSHGT----------------LNSIQLHAENQIIFAAGKHG----------------------- 278 (489)
Q Consensus 238 iwd~~~~~~~~~~~~~~h~~~----------------v~~~~~~p~~~~l~~~~~dg----------------------- 278 (489)
+||+.+++ ..+....+... +.+++|+|||++|++++.|+
T Consensus 176 ~~d~~~g~--~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~ 253 (741)
T 2ecf_A 176 VIDLASGR--QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRY 253 (741)
T ss_dssp EEETTTTE--EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEEC
T ss_pred EEecCCCC--EEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeec
Confidence 99998865 33333333322 47899999999999987765
Q ss_pred ----------eEEEEEcCC-Ccccceee--cCCccCCCCeeEEEeCCCCcceeeccc---------------------cc
Q 037120 279 ----------SIYLWDLRG-GRTSAPFH--NHKEVCHLPLTSLKLASMLEKIGTLKA---------------------QS 324 (489)
Q Consensus 279 ----------~i~lwd~~~-~~~~~~~~--~~~~~~~~~v~~l~~~~~~~~i~~~~~---------------------~~ 324 (489)
.|++||+.+ ++...... .|... +..++| |||+.++.... ..
T Consensus 254 ~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~----~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~ 328 (741)
T 2ecf_A 254 PAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIY----LARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLA 328 (741)
T ss_dssp CBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEE----EEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEE
T ss_pred CCCCCCCCeeEEEEEECCCCCceEEecCCCCcceE----EEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEE
Confidence 899999988 77533322 35555 999999 99987752110 00
Q ss_pred eeecc----ceeEEEeCCCCCeEEEEEecCCceEEEEee-ccceeeecCCCCCCcCCCCccccccCCCcc-eeecCCcEE
Q 037120 325 KIVSQ----EIHSIDLDPSCSYQLAFHLDDGWSGVLDVY-NSRVSHVHCPPPAWLSDSNNSADQLHLRKP-SWLSTNSIY 398 (489)
Q Consensus 325 ~~~~~----~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 398 (489)
..... .+..+.|+|+++.+++ ...+++..++... .+....+... . ..+..+ .|+|++..+
T Consensus 329 ~~~~~~~~~~~~~~~~spdg~~~~~-~~~~g~~~l~~~~~~~~~~~l~~~--~-----------~~v~~~~~~s~dg~~l 394 (741)
T 2ecf_A 329 HETSPTWVPLHNSLRFLDDGSILWS-SERTGFQHLYRIDSKGKAAALTHG--N-----------WSVDELLAVDEKAGLA 394 (741)
T ss_dssp EEECSSCCCCCSCCEECTTSCEEEE-ECTTSSCEEEEECSSSCEEESCCS--S-----------SCEEEEEEEETTTTEE
T ss_pred EcCCCCcCCcCCceEECCCCeEEEE-ecCCCccEEEEEcCCCCeeeeeec--c-----------eEEEeEeEEeCCCCEE
Confidence 01111 3457899999994444 4444443344332 2221111100 0 111223 588998888
Q ss_pred EEeecCCC--cEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCc----cee
Q 037120 399 AVGSSSDH--GIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKN----SSL 472 (489)
Q Consensus 399 l~sgs~d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~d----g~i 472 (489)
+++++.|+ .++||++.... .....+. + ...+.+++|+|+++.|+....+ +.+
T Consensus 395 ~~~~~~~~~~~~~l~~~~~~g---------~~~~~l~------------~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~ 452 (741)
T 2ecf_A 395 YFRAGIESARESQIYAVPLQG---------GQPQRLS------------K-APGMHSASFARNASVYVDSWSNNSTPPQI 452 (741)
T ss_dssp EEEECSSCTTCBEEEEEETTC---------CCCEECC------------C-SCSEEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred EEEEeCCCCceEEEEEEEcCC---------CCeeecc------------c-CCCceEEEECCCCCEEEEEecCCCCCCeE
Confidence 88888877 89999987530 3333343 3 5668899999999977765443 567
Q ss_pred EEEecc
Q 037120 473 LVVSQK 478 (489)
Q Consensus 473 ~v~~~~ 478 (489)
.++..+
T Consensus 453 ~l~~~~ 458 (741)
T 2ecf_A 453 ELFRAN 458 (741)
T ss_dssp EEEETT
T ss_pred EEEEcC
Confidence 777543
No 128
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.89 E-value=1.3e-21 Score=187.13 Aligned_cols=229 Identities=10% Similarity=0.062 Sum_probs=153.5
Q ss_pred ccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEE
Q 037120 149 LLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLI 228 (489)
Q Consensus 149 ~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 228 (489)
..|... |.+++|+|++. +|++|+. ..++|||+... ..... .+...+..+++.++++.+++
T Consensus 16 ~~h~~~---V~~v~fs~dg~-~la~g~~--~~~~iw~~~~~-----~~~~~---------~~~~~~~~~~~~~~~~~~~~ 75 (355)
T 3vu4_A 16 NHVSNP---VTDYEFNQDQS-CLILSTL--KSFEIYNVHPV-----AHIMS---------QEMRHLSKVRMLHRTNYVAF 75 (355)
T ss_dssp ---CCC---CCEEEECTTSS-EEEEECS--SEEEEEEETTE-----EEEEE---------EECSCCCEEEECTTSSEEEE
T ss_pred ccCCCc---eEEEEECCCCC-EEEEEcC--CEEEEEecCCc-----ceeee---------eecCCeEEEEEcCCCCEEEE
Confidence 345555 99999999986 7888874 46899998321 11111 11225788899998884446
Q ss_pred EEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCC-cccceeecCCccCCCCeeE
Q 037120 229 ASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGG-RTSAPFHNHKEVCHLPLTS 307 (489)
Q Consensus 229 s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~-~~~~~~~~~~~~~~~~v~~ 307 (489)
+++.|++|++||+++++ ++..+ .|...|.+++|+++. +++ +.|+.|++||+.++ +.+..+.. . ...
T Consensus 76 ~~~~d~~v~iWd~~~~~--~~~~~-~~~~~v~~v~~~~~~--~~~-~~~~~i~i~d~~~~~~~~~~~~~---~----~~~ 142 (355)
T 3vu4_A 76 VTGVKEVVHIWDDVKKQ--DVSRI-KVDAPVKDLFLSREF--IVV-SYGDVISVFKFGNPWKRITDDIR---F----GGV 142 (355)
T ss_dssp ECSSTTEEEEEETTTTE--EEEEE-ECSSCEEEEEECSSE--EEE-EETTEEEEEESSTTCCBSSCCEE---E----EEE
T ss_pred EECCccEEEEEECCCCc--EEEEE-ECCCceEEEEEcCCE--EEE-EEcCEEEEEECCCCceeeEEecc---C----Cce
Confidence 77889999999999876 44444 366799999998764 333 35889999999987 66655554 2 333
Q ss_pred EEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEE-EecCCceEEEEee------------------------ccc
Q 037120 308 LKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAF-HLDDGWSGVLDVY------------------------NSR 362 (489)
Q Consensus 308 l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~-~~~~~w~~~~~~~------------------------~~~ 362 (489)
+++++ ..+ +.. +..++-..+++.. .+|
T Consensus 143 ~~~s~--~~l--------------------------a~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h 194 (355)
T 3vu4_A 143 CEFSN--GLL--------------------------VYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH 194 (355)
T ss_dssp EEEET--TEE--------------------------EEEESSCTTCEEEEECCC------------------CCEEECCC
T ss_pred EEEEc--cEE--------------------------EEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEcc
Confidence 33333 111 111 1111111222222 222
Q ss_pred eeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCc-EEEEeccCCCCCCeeeccCcccchhhHhhhhccc
Q 037120 363 VSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHG-IHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKE 441 (489)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (489)
... +..++|+|+ +.++++|+.|++ |+|||+.++ +.+..+.
T Consensus 195 ~~~--------------------v~~~~~s~~-g~~l~s~s~d~~~v~iwd~~~~----------~~~~~~~-------- 235 (355)
T 3vu4_A 195 TNP--------------------IKMVRLNRK-SDMVATCSQDGTIIRVFKTEDG----------VLVREFR-------- 235 (355)
T ss_dssp SSC--------------------EEEEEECTT-SSEEEEEETTCSEEEEEETTTC----------CEEEEEE--------
T ss_pred CCc--------------------eEEEEECCC-CCEEEEEeCCCCEEEEEECCCC----------cEEEEEE--------
Confidence 222 234566665 578899999998 999999988 6666554
Q ss_pred CCccc-CCCceEEEEeeCCCCeEEeccCcceeEEEecccc
Q 037120 442 NRFVP-LSEGVTACVTHPLNNTIVAGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 442 ~~~~~-h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~~~~ 480 (489)
.+ |.+.|++++|+|++.+|++|+.||+|.||.-+..
T Consensus 236 ---~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 236 ---RGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp ---CTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred ---cCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 03 9999999999999999999999999999986543
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.88 E-value=3.5e-20 Score=186.69 Aligned_cols=289 Identities=15% Similarity=0.099 Sum_probs=188.4
Q ss_pred EECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEE
Q 037120 103 DFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVS 182 (489)
Q Consensus 103 ~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~ 182 (489)
+|+|++.++++++.|++|.+||..+.+.... +. .++ .+..++|+|++. .|++++.| ++|.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~--------i~-----~g~-----~~~~v~~spdg~-~l~v~~~d-~~V~ 203 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKV--------ID-----TGY-----AVHISRMSASGR-YLLVIGRD-ARID 203 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEE--------EE-----CST-----TEEEEEECTTSC-EEEEEETT-SEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEE--------Ee-----cCc-----ccceEEECCCCC-EEEEECCC-CeEE
Confidence 4899999999999999999999988554431 11 011 167799999997 66667777 9999
Q ss_pred EEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEec----CCCcEEEEEe-CCCcEEEEECCCCCcCceeeccC---
Q 037120 183 IYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSA----VNTSRLIASD-THGVVNIWDRRVGVLPSLELSTG--- 254 (489)
Q Consensus 183 vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~--- 254 (489)
+||+... ....+... . +...+..++|+| +++ ++++++ .+++|.+||..+.+ +++.+..
T Consensus 204 v~D~~~~---t~~~~~~i-------~-~g~~p~~va~sp~~~~dg~-~l~v~~~~~~~v~v~D~~t~~--~~~~i~~~g~ 269 (543)
T 1nir_A 204 MIDLWAK---EPTKVAEI-------K-IGIEARSVESSKFKGYEDR-YTIAGAYWPPQFAIMDGETLE--PKQIVSTRGM 269 (543)
T ss_dssp EEETTSS---SCEEEEEE-------E-CCSEEEEEEECCSTTCTTT-EEEEEEEESSEEEEEETTTCC--EEEEEECCEE
T ss_pred EEECcCC---CCcEEEEE-------e-cCCCcceEEeCCCcCCCCC-EEEEEEccCCeEEEEeccccc--cceeecccCc
Confidence 9999311 11222211 2 234679999999 999 777777 58999999998876 4544432
Q ss_pred -------C-CCceeEEEEeecCCEEEEEeC-CCeEEEEEcCCCcccc--eeecCCccCCCCeeEEEeCCCCcceeecccc
Q 037120 255 -------S-HGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRGGRTSA--PFHNHKEVCHLPLTSLKLASMLEKIGTLKAQ 323 (489)
Q Consensus 255 -------h-~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~~~~~--~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~ 323 (489)
| ...+.++.++|++..+++... ++.|.+||+.+++.+. .+. +... +..+
T Consensus 270 ~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~----~~~~--------------- 329 (543)
T 1nir_A 270 TVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPF----LHDG--------------- 329 (543)
T ss_dssp CSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSS----CCCE---------------
T ss_pred ccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcC----ccCc---------------
Confidence 2 236889999998877666654 9999999998866433 222 1222 3344
Q ss_pred ceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCccee-ecCCcEEEEee
Q 037120 324 SKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSW-LSTNSIYAVGS 402 (489)
Q Consensus 324 ~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~sg 402 (489)
.|+|+++++++....++-..+++..++........ ...+.. -+...| .|+++.+++++
T Consensus 330 -----------~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~--g~~ph~--------g~g~~~~~p~~g~~~~s~ 388 (543)
T 1nir_A 330 -----------GWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDV--GKTPHP--------GRGANFVHPKYGPVWSTS 388 (543)
T ss_dssp -----------EECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC--SSSBCC--------TTCEEEEETTTEEEEEEE
T ss_pred -----------eECCCCCEEEEEecCCCeEEEEECCCCeEEEeecc--CCCCCC--------CCCcccCCCCCccEEEec
Confidence 45555555554443333223444444433322111 000000 011233 46667777877
Q ss_pred c-CCCcEEEEeccCCCCCCeeecc-CcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEecc-------CcceeE
Q 037120 403 S-SDHGIHLLDFFPGSSSPSHVDY-NEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGT-------KNSSLL 473 (489)
Q Consensus 403 s-~d~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs-------~dg~i~ 473 (489)
+ .|++|.|||+.+.... +. -+.++.+. +|.+.+..+++||+++.|.+++ .+++|.
T Consensus 389 ~~~d~~V~v~d~~~~~~~----~~~~~~v~~l~------------~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~ 452 (543)
T 1nir_A 389 HLGDGSISLIGTDPKNHP----QYAWKKVAELQ------------GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVA 452 (543)
T ss_dssp BSSSSEEEEEECCTTTCT----TTBTSEEEEEE------------CSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEE
T ss_pred cCCCceEEEEEeCCCCCc----hhcCeEEEEEE------------cCCCCceEEEcCCCCCcEEEecCCCCCcccCceEE
Confidence 5 6899999999872000 00 05666777 8888999999999999999987 378999
Q ss_pred EEecccccc
Q 037120 474 VVSQKQQCT 482 (489)
Q Consensus 474 v~~~~~~~~ 482 (489)
||..+....
T Consensus 453 v~d~~~~~~ 461 (543)
T 1nir_A 453 VFDLKNLDA 461 (543)
T ss_dssp EEETTCTTS
T ss_pred EEECCCCCC
Confidence 998875543
No 130
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.87 E-value=1.5e-19 Score=172.42 Aligned_cols=283 Identities=11% Similarity=-0.010 Sum_probs=181.7
Q ss_pred CceeEEEECCCCcEEEEEec-------CCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCC
Q 037120 97 PGISALDFDCKGIYLVSATR-------SGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQD 169 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~-------dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~ 169 (489)
.++..++|+|+|++|++++. ++.|.+||..+.+.... .. .... +..++|+|++..
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~--------~~-------~~~~---~~~~~~s~dg~~ 102 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQA--------IH-------NDLK---PFGATINNTTQT 102 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEE--------EE-------ESSC---CCSEEEETTTTE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEE--------Ee-------cCCC---cceEEECCCCCE
Confidence 45789999999998888774 56899999988544331 10 1112 455999999976
Q ss_pred EEEEEecCCCEEEEEEeccCCCCCceeeeeceee--eeecCCcccCeeEEEEecCCCcEEEEEe--CCCcEEEEECCCCC
Q 037120 170 EVACASTRSNVVSIYDIGYISDEPVEVLKTRRSV--TVVGSDVQKGLSDLAFSAVNTSRLIASD--THGVVNIWDRRVGV 245 (489)
Q Consensus 170 ~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~l~s~s--~dg~i~iwd~~~~~ 245 (489)
++++...+ +.|.+||+... +.+.....- ..........+.+++|+|+++ .++.++ .++.|.+||..+++
T Consensus 103 l~v~~~~~-~~v~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~i~~~d~~~~~ 175 (353)
T 3vgz_A 103 LWFGNTVN-SAVTAIDAKTG-----EVKGRLVLDDRKRTEEVRPLQPRELVADDATN-TVYISGIGKESVIWVVDGGNIK 175 (353)
T ss_dssp EEEEETTT-TEEEEEETTTC-----CEEEEEESCCCCCCSSCCCCEEEEEEEETTTT-EEEEEEESSSCEEEEEETTTTE
T ss_pred EEEEecCC-CEEEEEeCCCC-----eeEEEEecCCCccccccCCCCCceEEECCCCC-EEEEEecCCCceEEEEcCCCCc
Confidence 66766666 99999999433 221111100 000000011268899999999 555554 58899999999876
Q ss_pred cCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccce
Q 037120 246 LPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSK 325 (489)
Q Consensus 246 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~ 325 (489)
....+..+...+.+++|+|+++++++++.++.|.+||+.+++.+..+..........+..++|+|+++.+.
T Consensus 176 --~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~------- 246 (353)
T 3vgz_A 176 --LKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAF------- 246 (353)
T ss_dssp --EEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEE-------
T ss_pred --eEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEE-------
Confidence 44444435566889999999999999999999999999998876665531111011255666666665442
Q ss_pred eeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCC
Q 037120 326 IVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSD 405 (489)
Q Consensus 326 ~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d 405 (489)
+...+++...+++..++......... ....+.|+|++..++++...+
T Consensus 247 -------------------~~~~~~~~v~~~d~~~~~~~~~~~~~--------------~~~~~~~s~dg~~l~v~~~~~ 293 (353)
T 3vgz_A 247 -------------------ITDSKAAEVLVVDTRNGNILAKVAAP--------------ESLAVLFNPARNEAYVTHRQA 293 (353)
T ss_dssp -------------------EEESSSSEEEEEETTTCCEEEEEECS--------------SCCCEEEETTTTEEEEEETTT
T ss_pred -------------------EEeCCCCEEEEEECCCCcEEEEEEcC--------------CCceEEECCCCCEEEEEECCC
Confidence 22222121122232222222111110 012367888888888888889
Q ss_pred CcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCc
Q 037120 406 HGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKN 469 (489)
Q Consensus 406 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~d 469 (489)
+.|.+||..++ +.+..+. ....+.+++|+|+++.|..+..+
T Consensus 294 ~~v~~~d~~~~----------~~~~~~~-------------~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 294 GKVSVIDAKSY----------KVVKTFD-------------TPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp TEEEEEETTTT----------EEEEEEE-------------CCSEEEEEEECTTSCEEEEEEEC
T ss_pred CeEEEEECCCC----------eEEEEEe-------------cCCCCCeEEEcCCCCEEEEEEcc
Confidence 99999999888 6665544 33468999999999966655554
No 131
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=1.8e-20 Score=196.69 Aligned_cols=307 Identities=7% Similarity=-0.066 Sum_probs=192.7
Q ss_pred eeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecC-
Q 037120 99 ISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTR- 177 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d- 177 (489)
+.+++|+|||+++++ +.||+|++||+.+.+.... . ..|......|.+++|+|+++ .|++++.+
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~--------~------~~~~~~~~~v~~~~~SpDg~-~l~~~~~~~ 82 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVL--------I------EGKKIESLRAIRYEISPDRE-YALFSYNVE 82 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEE--------E------CTTTTTTTTCSEEEECTTSS-EEEEEESCC
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEE--------e------ccccccccccceEEECCCCC-EEEEEecCc
Confidence 677899999998776 7899999999988443321 1 11222112388899999997 55555532
Q ss_pred -------CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCcee
Q 037120 178 -------SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLE 250 (489)
Q Consensus 178 -------~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 250 (489)
++.|.+||+..+.. .. . ....+|...+..++|+|||+ .|+.++. +.|++||+.+++ ..+
T Consensus 83 ~~~~~~~~~~i~~~d~~~~~~---~~---l----~~~~~~~~~~~~~~~SPdG~-~la~~~~-~~i~~~~~~~g~--~~~ 148 (723)
T 1xfd_A 83 PIYQHSYTGYYVLSKIPHGDP---QS---L----DPPEVSNAKLQYAGWGPKGQ-QLIFIFE-NNIYYCAHVGKQ--AIR 148 (723)
T ss_dssp CCSSSCCCSEEEEEESSSCCC---EE---C----CCTTCCSCCCSBCCBCSSTT-CEEEEET-TEEEEESSSSSC--CEE
T ss_pred cceeecceeeEEEEECCCCce---Ee---c----cCCccccccccccEECCCCC-EEEEEEC-CeEEEEECCCCc--eEE
Confidence 17899999954321 11 1 11245666789999999999 8888875 899999999876 333
Q ss_pred eccCCCCc------------------eeEEEEeecCCEEEEEeCCC----------------------------------
Q 037120 251 LSTGSHGT------------------LNSIQLHAENQIIFAAGKHG---------------------------------- 278 (489)
Q Consensus 251 ~~~~h~~~------------------v~~~~~~p~~~~l~~~~~dg---------------------------------- 278 (489)
....+... +.+++|+|||+.|++++.|+
T Consensus 149 ~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 228 (723)
T 1xfd_A 149 VVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSI 228 (723)
T ss_dssp EECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEE
T ss_pred EecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCee
Confidence 33333332 37899999999999887543
Q ss_pred eEEEEEcCCCcccceeecC------CccCCCCeeEEEeCCCCcceeecc-c-----cc-----------e---ee-ccce
Q 037120 279 SIYLWDLRGGRTSAPFHNH------KEVCHLPLTSLKLASMLEKIGTLK-A-----QS-----------K---IV-SQEI 331 (489)
Q Consensus 279 ~i~lwd~~~~~~~~~~~~~------~~~~~~~v~~l~~~~~~~~i~~~~-~-----~~-----------~---~~-~~~i 331 (489)
.|++||+.+++....+..+ ... +.+++|+|||+.++... . .. . .. ...+
T Consensus 229 ~l~~~d~~~~~~~~~l~~~~~~~~~~~~----~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 304 (723)
T 1xfd_A 229 SLHVIGLNGPTHDLEMMPPDDPRMREYY----ITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWL 304 (723)
T ss_dssp EEEEEESSSSCCCEECCCCCCGGGSSEE----EEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCC
T ss_pred EEEEEECCCCceeEEeeCCccCCCccce----eEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEE
Confidence 8999999988765555543 334 89999999998773211 0 00 0 00 1112
Q ss_pred ----eEEEeCCCCCeEEEE-EecCC----ceEEEEee--cccee-eecCCCCCCcCCCCccccccCC-CcceeecCCcEE
Q 037120 332 ----HSIDLDPSCSYQLAF-HLDDG----WSGVLDVY--NSRVS-HVHCPPPAWLSDSNNSADQLHL-RKPSWLSTNSIY 398 (489)
Q Consensus 332 ----~~~~~~p~~~~~~~~-~~~~~----w~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 398 (489)
..+.|+|+++.++.. ...++ +..++... .+... ... ..... . ... ..+.|+|+|..+
T Consensus 305 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~----~l~~~-~-----~~~~~~~~~spdg~~l 374 (723)
T 1xfd_A 305 HRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQ----SITSG-D-----WDVTKILAYDEKGNKI 374 (723)
T ss_dssp CCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCC----BSCCS-S-----SCEEEEEEEETTTTEE
T ss_pred eccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcccee----EeecC-C-----eEEEeeeEEcCCCCEE
Confidence 267899999988765 44443 33332221 11110 000 00000 0 011 125799999888
Q ss_pred EEeecCC--CcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEec
Q 037120 399 AVGSSSD--HGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAG 466 (489)
Q Consensus 399 l~sgs~d--~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sg 466 (489)
++++..+ +.++||++..... .....+. ....|...+..++|+|+++.|+..
T Consensus 375 ~~~~~~~~~~~~~l~~~~~~~~--------~~~~~l~---------~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 375 YFLSTEDLPRRRQLYSANTVGN--------FNRQCLS---------CDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp EEEESSSCTTCCEEEEECSSTT--------CCCBCSS---------TTSSSSCCCCEEEECTTSSEEEEE
T ss_pred EEEEcCCCCcceEEEEEeCCCC--------CCcceec---------ccccCCCCeEEEEECCCCCEEEEE
Confidence 8777777 8899999875400 0111222 000266778999999999876653
No 132
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=4e-20 Score=181.29 Aligned_cols=187 Identities=12% Similarity=0.074 Sum_probs=129.1
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCccc-ccc-cccCCCCCCceeEEEeeCCCCCEEE--
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKED-QSK-HLLHIPLPQQLDAVRWNLANQDEVA-- 172 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~-~~~-~~~h~~~~~~V~~v~~~~~~~~~l~-- 172 (489)
..++.+++++++.+|++|+.|+ ++||+........... ........ ... ...+.. .|.+++|+|++..+++
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~v~~l~~spdg~~lav~~ 111 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPG-DDPNKIVDKVQGLLVPMKF---PIHHLALSCDNLTLSACM 111 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTT-CCTTCEEECCCCEEECCSS---CEEEEEECTTSCEEEEEE
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccc-cCcccccccCccccccCCC---cccEEEEcCCCCEEEEEE
Confidence 4589999999999999999998 8998765421111000 00000000 000 011222 3999999999874443
Q ss_pred -EEecCCCEEEEEEeccCCCC---CceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCc
Q 037120 173 -CASTRSNVVSIYDIGYISDE---PVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPS 248 (489)
Q Consensus 173 -s~~~d~g~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 248 (489)
+++.| ++|+|||+...... ....+.. ...+.+|...|++++|+|++.++|++++.||+|++||++++. .
T Consensus 112 ~sgs~d-~~v~iwd~~~~~~~~~~~~~~~~~----~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~--~ 184 (434)
T 2oit_A 112 MSSEYG-SIIAFFDVRTFSNEAKQQKRPFAY----HKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV--K 184 (434)
T ss_dssp EETTTE-EEEEEEEHHHHHCTTCSSCCCSEE----EECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE--E
T ss_pred eccCCC-ceEEEEEccccccCCcCCcceeee----eeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc--c
Confidence 67777 99999999543110 0011111 223478999999999999854499999999999999999874 3
Q ss_pred eeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeec
Q 037120 249 LELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHN 296 (489)
Q Consensus 249 ~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~ 296 (489)
.....+|...|.+++|+|+|++|++|+.||+|++||++ ++....+..
T Consensus 185 ~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~ 231 (434)
T 2oit_A 185 VCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPC 231 (434)
T ss_dssp EEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECC
T ss_pred eeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccC
Confidence 33445788999999999999999999999999999998 554444443
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.86 E-value=1.1e-18 Score=175.86 Aligned_cols=310 Identities=12% Similarity=0.044 Sum_probs=184.1
Q ss_pred eeEEEECCCCcEEEEEecCCeEEEEeC--CCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeC----CCCCEEE
Q 037120 99 ISALDFDCKGIYLVSATRSGCLTVHDF--ESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNL----ANQDEVA 172 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~dg~i~vwd~--~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~----~~~~~l~ 172 (489)
+.+++|+|+|++|++++.|+.|++||+ .+.+.... + . + +..+..++|+| +++.+++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~--------i------~-~---g~~p~~va~sp~~~~dg~~l~v 242 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE--------I------K-I---GIEARSVESSKFKGYEDRYTIA 242 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEE--------E------E-C---CSEEEEEEECCSTTCTTTEEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEE--------E------e-c---CCCcceEEeCCCcCCCCCEEEE
Confidence 889999999999999999999999999 55433321 1 1 1 12278899999 9874444
Q ss_pred EEecCCCEEEEEEeccCCCCCceeeeeceeeeeecC---Ccc-cCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCc
Q 037120 173 CASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGS---DVQ-KGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPS 248 (489)
Q Consensus 173 s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~---~h~-~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 248 (489)
+...+ ++|.+||.... +.+......-.... -|. ..+.++.++|++..++++...++.|.+||+.+.+...
T Consensus 243 ~~~~~-~~v~v~D~~t~-----~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~ 316 (543)
T 1nir_A 243 GAYWP-PQFAIMDGETL-----EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT 316 (543)
T ss_dssp EEEES-SEEEEEETTTC-----CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE
T ss_pred EEccC-CeEEEEecccc-----ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce
Confidence 44345 99999998432 22221111000000 133 3789999999988677888899999999998865322
Q ss_pred eeeccCCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCC-Ccceeecccccee
Q 037120 249 LELSTGSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASM-LEKIGTLKAQSKI 326 (489)
Q Consensus 249 ~~~~~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~i~~~~~~~~~ 326 (489)
+..+ .+...+..++|+|+|+++++++. +++|.+||+.+++++..+......+......+ ++|+ +..+++...
T Consensus 317 ~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~---- 390 (543)
T 1nir_A 317 VTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHL---- 390 (543)
T ss_dssp EEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBS----
T ss_pred eEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccC----
Confidence 2122 45567889999999998887765 89999999999998777764221100002222 3555 333332100
Q ss_pred eccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEee--c-
Q 037120 327 VSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGS--S- 403 (489)
Q Consensus 327 ~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg--s- 403 (489)
....|.-+...+.+. .+..|. ++....++... ...+.++|++..+.++. .
T Consensus 391 ~d~~V~v~d~~~~~~------~~~~~~-~v~~l~~~g~~--------------------~~~v~~~pdg~~l~v~~~~~~ 443 (543)
T 1nir_A 391 GDGSISLIGTDPKNH------PQYAWK-KVAELQGQGGG--------------------SLFIKTHPKSSHLYVDTTFNP 443 (543)
T ss_dssp SSSEEEEEECCTTTC------TTTBTS-EEEEEECSCSC--------------------CCCEECCTTCCEEEECCTTCS
T ss_pred CCceEEEEEeCCCCC------chhcCe-EEEEEEcCCCC--------------------ceEEEcCCCCCcEEEecCCCC
Confidence 001112222211100 000132 11111111111 12244556655555442 1
Q ss_pred ---CCCcEEEEeccCCCCCCeeeccCccc-chhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEec-----cCcceeEE
Q 037120 404 ---SDHGIHLLDFFPGSSSPSHVDYNEDI-ESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAG-----TKNSSLLV 474 (489)
Q Consensus 404 ---~d~~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sg-----s~dg~i~v 474 (489)
.+++|.|||+.+. +.. ..+... .+.. .-.+...|..++|+|++..+..+ +.++.|.|
T Consensus 444 ~~~~~~~v~v~d~~~~----------~~~~~~~~v~-~~~~---~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v 509 (543)
T 1nir_A 444 DARISQSVAVFDLKNL----------DAKYQVLPIA-EWAD---LGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVV 509 (543)
T ss_dssp SHHHHTCEEEEETTCT----------TSCCEEECHH-HHHC---CCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEE
T ss_pred CcccCceEEEEECCCC----------CCCeEEeech-hhcc---cCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEE
Confidence 2679999999988 443 222110 0000 00456789999999999977755 35899999
Q ss_pred Eeccc
Q 037120 475 VSQKQ 479 (489)
Q Consensus 475 ~~~~~ 479 (489)
|..+.
T Consensus 510 ~D~~t 514 (543)
T 1nir_A 510 VDDKT 514 (543)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 98765
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.85 E-value=2.5e-19 Score=170.01 Aligned_cols=288 Identities=8% Similarity=0.018 Sum_probs=165.6
Q ss_pred cEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEecc
Q 037120 109 IYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGY 188 (489)
Q Consensus 109 ~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~ 188 (489)
.++++++.|+.|++||+.... .... .....|... +.+++|+|++..+++++..+ +.|.+|++..
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~-----------~~~~-~~~~~~~~~---~~~~~~spdg~~l~~~~~~~-~~v~~~~~~~ 69 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEG-----------ALTL-TQVVDVPGQ---VQPMVVSPDKRYLYVGVRPE-FRVLAYRIAP 69 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTS-----------CEEE-EEEEECSSC---CCCEEECTTSSEEEEEETTT-TEEEEEEECT
T ss_pred EEEEeCCCCCeEEEEEECCCC-----------cEEE-eeeEecCCC---CceEEECCCCCEEEEeecCC-CeEEEEEecC
Confidence 344555789999999996311 0000 001123333 67799999987555555533 8999999952
Q ss_pred CCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe-CCCcEEEEECCCCCc-CceeeccCCCCceeEEEEee
Q 037120 189 ISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD-THGVVNIWDRRVGVL-PSLELSTGSHGTLNSIQLHA 266 (489)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~-~~~~~~~~h~~~v~~~~~~p 266 (489)
.... +.....+ ..+. .+..++|+|+++ .|++++ .++.|.+||+..+.. ....... ....+.+++|+|
T Consensus 70 ~~~~----~~~~~~~----~~~~-~~~~~~~s~dg~-~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~ 138 (343)
T 1ri6_A 70 DDGA----LTFAAES----ALPG-SLTHISTDHQGQ-FVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISP 138 (343)
T ss_dssp TTCC----EEEEEEE----ECSS-CCSEEEECTTSS-EEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECT
T ss_pred CCCc----eeecccc----ccCC-CCcEEEEcCCCC-EEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECC
Confidence 2111 1111111 2222 788999999999 665555 588999999953221 1333332 334688999999
Q ss_pred cCCEEEEEe-CCCeEEEEEcCC-Ccccc----eeecCCccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCC
Q 037120 267 ENQIIFAAG-KHGSIYLWDLRG-GRTSA----PFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSC 340 (489)
Q Consensus 267 ~~~~l~~~~-~dg~i~lwd~~~-~~~~~----~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~ 340 (489)
+++++++++ .++.|++||+.+ ++... .+..+.+ ..+..++|+|+++.+.
T Consensus 139 dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~pdg~~l~---------------------- 193 (343)
T 1ri6_A 139 DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEG---AGPRHMVFHPNEQYAY---------------------- 193 (343)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTT---CCEEEEEECTTSSEEE----------------------
T ss_pred CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCC---CCcceEEECCCCCEEE----------------------
Confidence 999988888 699999999987 54321 2222111 1255666666665442
Q ss_pred CeEEEEEecCCceEEEEee--cccee---eecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccC
Q 037120 341 SYQLAFHLDDGWSGVLDVY--NSRVS---HVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFP 415 (489)
Q Consensus 341 ~~~~~~~~~~~w~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~ 415 (489)
+....++-..+++.. .+... .....+..+... .....++|+|++..+++++..|+.|++||+..
T Consensus 194 ----~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~ 262 (343)
T 1ri6_A 194 ----CVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDT-------RWAADIHITPDGRHLYACDRTASLITVFSVSE 262 (343)
T ss_dssp ----EEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSC-------CCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred ----EEeCCCCEEEEEEecCCCCcEEEEeeccccCcccccc-------CCccceEECCCCCEEEEEecCCCEEEEEEEcC
Confidence 222111111122211 01000 000010011000 11124678888888888888999999999983
Q ss_pred CCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEecc-CcceeEEEecc
Q 037120 416 GSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGT-KNSSLLVVSQK 478 (489)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs-~dg~i~v~~~~ 478 (489)
..... +.+..+. .+. .+.+++|+|+++.|++++ .++.+.||...
T Consensus 263 ~~~~~------~~~~~~~------------~~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 263 DGSVL------SKEGFQP------------TET-QPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp TSCCE------EEEEEEE------------CSS-SCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCCce------EEeeeec------------CCC-ccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 20000 2222222 233 388999999999777666 68999999543
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.84 E-value=1.3e-19 Score=167.86 Aligned_cols=174 Identities=12% Similarity=0.072 Sum_probs=115.5
Q ss_pred CCCceeEEEECCCCcEEEEEecCCeEEEEeCCC-cccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEE
Q 037120 95 GKPGISALDFDCKGIYLVSATRSGCLTVHDFES-LYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVAC 173 (489)
Q Consensus 95 ~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~-~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s 173 (489)
+...|.+++|+|+|++|++++ ++.|.+||+.+ ...... . ..|. ...|.+++|+|++..++++
T Consensus 40 ~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~--------~------~~~~--~~~~~~~~~spdg~~l~~~ 102 (297)
T 2ojh_A 40 TPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKV--------D------TGFA--TICNNDHGISPDGALYAIS 102 (297)
T ss_dssp ESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEEC--------C------CTTC--CCBCSCCEECTTSSEEEEE
T ss_pred CCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEe--------c------cccc--cccccceEECCCCCEEEEE
Confidence 456699999999999999987 78999999987 544331 1 1111 1127789999999744444
Q ss_pred EecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeecc
Q 037120 174 ASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELST 253 (489)
Q Consensus 174 ~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 253 (489)
....++.+.||.+....... .. +. +...+..++|+|+++.++++++.|+.++||++..... ....+.
T Consensus 103 ~~~~~~~~~l~~~~~~~~~~-------~~----~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~-~~~~~~ 169 (297)
T 2ojh_A 103 DKVEFGKSAIYLLPSTGGTP-------RL----MT-KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG-VETRLT 169 (297)
T ss_dssp ECTTTSSCEEEEEETTCCCC-------EE----CC-SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC-CEEECC
T ss_pred EeCCCCcceEEEEECCCCce-------EE----ee-cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCC-cceEcc
Confidence 42212456666653222111 11 12 2224888999999993444788899999998654222 233455
Q ss_pred CCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcC-CCcccceeecCC
Q 037120 254 GSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLR-GGRTSAPFHNHK 298 (489)
Q Consensus 254 ~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~-~~~~~~~~~~~~ 298 (489)
.|...+.+++|+|+++++++++. ++.+++|++. .+..+..+..+.
T Consensus 170 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 216 (297)
T 2ojh_A 170 HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSA 216 (297)
T ss_dssp CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCS
T ss_pred cCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCC
Confidence 67788999999999998887775 9999999986 344444444443
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.84 E-value=7.5e-19 Score=166.12 Aligned_cols=292 Identities=8% Similarity=0.029 Sum_probs=172.4
Q ss_pred EECCCCc-EEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCCCEE
Q 037120 103 DFDCKGI-YLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRSNVV 181 (489)
Q Consensus 103 ~fs~~g~-~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i 181 (489)
.|++++. .+++++.++.|.+||..+.+.... . ..+... + +++|+|++..+++++..+ +.|
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~--------~------~~~~~~---~-~~~~s~dg~~l~~~~~~~-~~i 64 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQ--------I------TLGYDF---V-DTAITSDCSNVVVTSDFC-QTL 64 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEE--------E------ECCCCE---E-EEEECSSSCEEEEEESTT-CEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeee--------E------EccCCc---c-eEEEcCCCCEEEEEeCCC-CeE
Confidence 3566554 477888899999999988544331 1 111122 5 799999997555555556 899
Q ss_pred EEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCC---cEEEEECCCCCcCceeeccCCCCc
Q 037120 182 SIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHG---VVNIWDRRVGVLPSLELSTGSHGT 258 (489)
Q Consensus 182 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~h~~~ 258 (489)
.+||+..... .... +..+.....+++|+|+++ +++++..++ .|.+||+.+++ .+..+.. ...
T Consensus 65 ~~~d~~~~~~----~~~~-------~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~i~v~d~~~~~--~~~~~~~-~~~ 129 (331)
T 3u4y_A 65 VQIETQLEPP----KVVA-------IQEGQSSMADVDITPDDQ-FAVTVTGLNHPFNMQSYSFLKNK--FISTIPI-PYD 129 (331)
T ss_dssp EEEECSSSSC----EEEE-------EEECSSCCCCEEECTTSS-EEEECCCSSSSCEEEEEETTTTE--EEEEEEC-CTT
T ss_pred EEEECCCCce----eEEe-------cccCCCCccceEECCCCC-EEEEecCCCCcccEEEEECCCCC--eEEEEEC-CCC
Confidence 9999953321 0111 122444555599999999 777555443 89999998876 4444433 345
Q ss_pred eeEEEEeecCCEEEEEeC-CCe-EEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEe
Q 037120 259 LNSIQLHAENQIIFAAGK-HGS-IYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDL 336 (489)
Q Consensus 259 v~~~~~~p~~~~l~~~~~-dg~-i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~ 336 (489)
..+++|+|+|+++++++. ++. |.+|++.....+..... . . + ........+.|
T Consensus 130 ~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~-~-~----------------~--------~~~~~~~~~~~ 183 (331)
T 3u4y_A 130 AVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQ-E-F----------------I--------SGGTRPFNITF 183 (331)
T ss_dssp EEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEE-E-E----------------E--------CSSSSEEEEEE
T ss_pred ccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCC-c-c----------------c--------cCCCCccceEE
Confidence 689999999997776654 677 99999986433211110 0 0 0 00112244556
Q ss_pred CCCCCeEEEEEecCCceEEEEeeccce---eeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEec
Q 037120 337 DPSCSYQLAFHLDDGWSGVLDVYNSRV---SHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDF 413 (489)
Q Consensus 337 ~p~~~~~~~~~~~~~w~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~ 413 (489)
+|+++++++....++...+++...+.. ...... . .....++|+|+|..++++...++.|.+||.
T Consensus 184 spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~------~-------~~~~~~~~spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 184 TPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT------N-------NLPGTIVVSRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp CTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC------S-------SCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred CCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC------C-------CCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence 666655555444333333444443332 111100 0 122457888998878788778889999999
Q ss_pred cCCCCCCeeeccCcc--cchhhHhhhhcccCCcccCCCceEEEEeeCCCCeE-EeccCcceeEEEecccccc
Q 037120 414 FPGSSSPSHVDYNED--IESLSERTKLKKENRFVPLSEGVTACVTHPLNNTI-VAGTKNSSLLVVSQKQQCT 482 (489)
Q Consensus 414 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i-~sgs~dg~i~v~~~~~~~~ 482 (489)
.++ +. +..+. ....... .....+.+++|+|++..| +++..++.|.||..+.+.+
T Consensus 251 ~~~----------~~~~~~~~~--~~~~~~~---~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 251 LSG----------TLSFVKSFG--HGLLIDP---RPLFGANQMALNKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp TTT----------EEEEEEEEE--CCCCCCC---GGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred CCC----------ceeeecccc--cccccCC---CCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 887 33 11111 0000000 111123679999999976 4556678999998766543
No 137
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.83 E-value=4e-19 Score=193.72 Aligned_cols=325 Identities=11% Similarity=0.006 Sum_probs=206.5
Q ss_pred cccCCCceeEEEECCCCcEEEEEecC------CeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCC----CceeEE
Q 037120 92 RSFGKPGISALDFDCKGIYLVSATRS------GCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLP----QQLDAV 161 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~~la~g~~d------g~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~----~~V~~v 161 (489)
+..+...|.+++|||||++||.++.+ ..|.+||+.+..... + ..|.... ..+.++
T Consensus 48 lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~---------l------t~~~~~~~~~~~~~~~~ 112 (1045)
T 1k32_A 48 IVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKR---------I------TYFSGKSTGRRMFTDVA 112 (1045)
T ss_dssp EECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEE---------C------CCCCEEEETTEECSEEE
T ss_pred eeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEE---------c------ccCCCcccccccccccc
Confidence 34455669999999999999988654 479999998744222 1 2222220 013889
Q ss_pred EeeCCCCCEEEEEecC-----CCEEEEEEeccCCCCC-----ce-------------------------------ee-ee
Q 037120 162 RWNLANQDEVACASTR-----SNVVSIYDIGYISDEP-----VE-------------------------------VL-KT 199 (489)
Q Consensus 162 ~~~~~~~~~l~s~~~d-----~g~i~vwd~~~~~~~~-----~~-------------------------------~~-~~ 199 (489)
+|+|+++ ++++++.+ ...|.+||+..+.... .. +. ..
T Consensus 113 ~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~ 191 (1045)
T 1k32_A 113 GFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEV 191 (1045)
T ss_dssp EECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEE
T ss_pred cCCCCCE-EEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEEC
Confidence 9999997 77777632 1468888874321100 00 00 00
Q ss_pred ceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCe
Q 037120 200 RRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGS 279 (489)
Q Consensus 200 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~ 279 (489)
.......+.+|...+.++.|+++ . ++++++.|+.+.||++..... ..+.+..|. .+...+|+|+|+.++.+ .++.
T Consensus 192 ~~~~~~~l~~~~~~v~~~~~s~d-~-l~~~~~~dg~~~l~~~~~~g~-~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~ 266 (1045)
T 1k32_A 192 NSGAFKKIVDMSTHVSSPVIVGH-R-IYFITDIDGFGQIYSTDLDGK-DLRKHTSFT-DYYPRHLNTDGRRILFS-KGGS 266 (1045)
T ss_dssp ETTEEEEEECCSSCCEEEEEETT-E-EEEEECTTSSCEEEEEETTSC-SCEECCCCC-SSCEEEEEESSSCEEEE-ETTE
T ss_pred CCCCeEECcCCCCcccceEEeCC-E-EEEEEeccCceEEEEEeCCCC-cceEecCCC-CcceeeEcCCCCEEEEE-eCCE
Confidence 00011223678889999999987 4 778888899999998764221 223333444 46778999999988877 5899
Q ss_pred EEEEEcCCCcccceeecC-----------CccCCCCeeEEEeC-CCCcceeecccc--------------ceeecc-cee
Q 037120 280 IYLWDLRGGRTSAPFHNH-----------KEVCHLPLTSLKLA-SMLEKIGTLKAQ--------------SKIVSQ-EIH 332 (489)
Q Consensus 280 i~lwd~~~~~~~~~~~~~-----------~~~~~~~v~~l~~~-~~~~~i~~~~~~--------------~~~~~~-~i~ 332 (489)
|++||+.. ..+..+..+ ... +.+++|+ |+|+.++..... ...+.. .+.
T Consensus 267 i~~~d~~~-~~l~~l~~~~~~~~~~~~~~~~~----v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 341 (1045)
T 1k32_A 267 IYIFNPDT-EKIEKIEIGDLESPEDRIISIPS----KFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYV 341 (1045)
T ss_dssp EEEECTTT-CCEEECCCCCCCBCCSEEEECGG----GGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEE
T ss_pred EEEecCCc-eEeeeeccCcccccccccccccc----cceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEE
Confidence 99999944 334344432 223 8999999 999877532210 111223 677
Q ss_pred EEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEe
Q 037120 333 SIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLD 412 (489)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd 412 (489)
.+.|+ ++..++....+...-.+++...+....+. . . ......++|+|+|.. ++.++.++.|++||
T Consensus 342 ~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~-~------~------~~~~~~~~~SpDG~~-la~~~~~~~v~~~d 406 (1045)
T 1k32_A 342 RRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFE-E------N------LGNVFAMGVDRNGKF-AVVANDRFEIMTVD 406 (1045)
T ss_dssp EECSS-SEEEEEEEETTEEEEEEEETTTCCEEECC-C------C------CCSEEEEEECTTSSE-EEEEETTSEEEEEE
T ss_pred eeeEc-CCCeEEEEECCCceEEEEECCCCCceEec-C------C------ccceeeeEECCCCCE-EEEECCCCeEEEEE
Confidence 88898 88777765542110002232222222211 0 0 012345788888654 55667899999999
Q ss_pred ccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcc----------eeEEEeccc
Q 037120 413 FFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNS----------SLLVVSQKQ 479 (489)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg----------~i~v~~~~~ 479 (489)
+.++ +....+. +|.+.|.+++|+|++++|++++.++ .|.+|..+.
T Consensus 407 ~~tg----------~~~~~~~------------~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 407 LETG----------KPTVIER------------SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp TTTC----------CEEEEEE------------CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred CCCC----------ceEEecc------------CCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 9988 6655555 7888999999999999999887654 899997654
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.82 E-value=3.2e-18 Score=179.10 Aligned_cols=293 Identities=14% Similarity=0.095 Sum_probs=173.5
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
..|.+++|+|| ..++.+. ++.|++||+.+.+... ...+... +.+++|+|+++ .|+.+.
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~---------------l~~~~~~---~~~~~~SpdG~-~la~~~- 139 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTY---------------LFDTNEE---TASLDFSPVGD-RVAYVR- 139 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEE---------------EECCTTC---CTTCEECTTSS-EEEEEE-
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEE---------------ccCCccc---ccCCcCCCCCC-EEEEEE-
Confidence 45999999999 5555553 5999999998743322 1112223 66699999997 555554
Q ss_pred CCCEEEEEEecc-----CCCCCceeeeeceeeee----ecCCcccCeeEEEEecCCCcEEEEEe----------------
Q 037120 177 RSNVVSIYDIGY-----ISDEPVEVLKTRRSVTV----VGSDVQKGLSDLAFSAVNTSRLIASD---------------- 231 (489)
Q Consensus 177 d~g~i~vwd~~~-----~~~~~~~~~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~~l~s~s---------------- 231 (489)
+ +.|.+||+.. +. ............. ....+...+.+++|+|||+ .|++++
T Consensus 140 ~-~~i~v~~~~~~~~~~g~--~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~-~la~~~~d~~~~~~~~~~~~~~ 215 (706)
T 2z3z_A 140 N-HNLYIARGGKLGEGMSR--AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS-CLAFYRMDQSMVKPTPIVDYHP 215 (706)
T ss_dssp T-TEEEEEECBCTTSCCCC--CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS-EEEEEEEECTTSCCEEEEECCS
T ss_pred C-CeEEEEecCcccccCCC--cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC-EEEEEEECCCCCceEEeeccCC
Confidence 4 9999999954 21 1111100000000 0011122358899999999 888877
Q ss_pred -----------------CCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCC-----eEEEEEcCCCc
Q 037120 232 -----------------THGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHG-----SIYLWDLRGGR 289 (489)
Q Consensus 232 -----------------~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg-----~i~lwd~~~~~ 289 (489)
.+..|++||+.+++...+.....|...+.+++|+|+|+.|++++.++ .|++||+.+++
T Consensus 216 ~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~ 295 (706)
T 2z3z_A 216 LEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR 295 (706)
T ss_dssp SSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC
T ss_pred CCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc
Confidence 44689999998875222211225677899999999999999887765 99999999884
Q ss_pred ccceee-c-CCccCCCCeeEEEeCC--CCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEee-cccee
Q 037120 290 TSAPFH-N-HKEVCHLPLTSLKLAS--MLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVY-NSRVS 364 (489)
Q Consensus 290 ~~~~~~-~-~~~~~~~~v~~l~~~~--~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~-~~~~~ 364 (489)
....+. . +... ..++.++.|+| +|+++. +.. .+++..++... .+...
T Consensus 296 ~~~~~~~~~~~~~-~~~~~~~~~sp~~dg~~l~--------------------------~~~-~~g~~~l~~~~~~~~~~ 347 (706)
T 2z3z_A 296 FVRTLFVETDKHY-VEPLHPLTFLPGSNNQFIW--------------------------QSR-RDGWNHLYLYDTTGRLI 347 (706)
T ss_dssp EEEEEEEEECSSC-CCCCSCCEECTTCSSEEEE--------------------------EEC-TTSSCEEEEEETTSCEE
T ss_pred eeeEEEEccCCCe-ECccCCceeecCCCCEEEE--------------------------EEc-cCCccEEEEEECCCCEE
Confidence 333322 1 1111 01134455555 554332 211 11222222221 11111
Q ss_pred eecCCCCCCcCCCCccccccCCCc-ceeecCCcEEEEeecCCC----cEEEEeccCCCCCCeeeccCcccchhhHhhhhc
Q 037120 365 HVHCPPPAWLSDSNNSADQLHLRK-PSWLSTNSIYAVGSSSDH----GIHLLDFFPGSSSPSHVDYNEDIESLSERTKLK 439 (489)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~sgs~d~----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (489)
..... .. ..+.. +.|+|++..++++++.++ .|+.||+.++ + ...+
T Consensus 348 ~~l~~-~~-----------~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~----------~-~~~l------- 397 (706)
T 2z3z_A 348 RQVTK-GE-----------WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG----------K-TKDL------- 397 (706)
T ss_dssp EECCC-SS-----------SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC----------C-CEES-------
T ss_pred EecCC-CC-----------eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC----------C-ceec-------
Confidence 10000 00 01111 578888888888887776 6677776665 3 2222
Q ss_pred ccCCcccCCCceEEEEeeCCCCeEEeccCc----ceeEEEeccc
Q 037120 440 KENRFVPLSEGVTACVTHPLNNTIVAGTKN----SSLLVVSQKQ 479 (489)
Q Consensus 440 ~~~~~~~h~~~V~~va~~p~~~~i~sgs~d----g~i~v~~~~~ 479 (489)
.|...+.+++|+|+++.|+....+ +.|.+|..+.
T Consensus 398 ------~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 398 ------TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp ------CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSS
T ss_pred ------cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCC
Confidence 366779999999999988766433 5688886544
No 139
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.82 E-value=6.8e-18 Score=160.73 Aligned_cols=168 Identities=13% Similarity=0.079 Sum_probs=108.5
Q ss_pred CceeEEEECCCCcEEEEEec---CCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEE
Q 037120 97 PGISALDFDCKGIYLVSATR---SGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVAC 173 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~---dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s 173 (489)
..+..++|+|+|+ |++++. ++.|.+|++.+..... ......+... +..++|+|+++.++++
T Consensus 40 ~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~------------~~~~~~~~~~---p~~~a~spdg~~l~~~ 103 (347)
T 3hfq_A 40 QNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHK------------LNTVVAPGTP---PAYVAVDEARQLVYSA 103 (347)
T ss_dssp SCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEE------------EEEEEEESCC---CSEEEEETTTTEEEEE
T ss_pred CCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEE------------eeeeecCCCC---CEEEEECCCCCEEEEE
Confidence 4577899999999 554443 6899999996533211 0111122333 6779999999745544
Q ss_pred EecCCCEEEEEEeccCCCCCceeeeeceeeeeecC-----CcccCeeEEEEecCCCcEEEEEeCCCcEEEEECC-CCCcC
Q 037120 174 ASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGS-----DVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRR-VGVLP 247 (489)
Q Consensus 174 ~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~-~~~~~ 247 (489)
...+ +.|.+||+.... ....+.... .... .+...+.+++|+|+++ ++++...++.|.+||+. .++..
T Consensus 104 ~~~~-~~v~v~~~~~~g--~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~ 176 (347)
T 3hfq_A 104 NYHK-GTAEVMKIAADG--ALTLTDTVQ---HSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLS 176 (347)
T ss_dssp ETTT-TEEEEEEECTTS--CEEEEEEEE---CCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEE
T ss_pred eCCC-CEEEEEEeCCCC--Ceeecceee---cCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEE
Confidence 4355 999999994321 111111111 0000 1234588999999999 88888889999999998 33321
Q ss_pred ceeecc-CCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCC
Q 037120 248 SLELST-GSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRG 287 (489)
Q Consensus 248 ~~~~~~-~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~ 287 (489)
...... .....+..++|+|+|+++++++. ++.|++||+..
T Consensus 177 ~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 177 EQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 111111 22346788999999997777655 89999999874
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.81 E-value=1.8e-17 Score=156.55 Aligned_cols=254 Identities=8% Similarity=0.022 Sum_probs=152.5
Q ss_pred CceeEEEECCCCcEEEEEec-CCeEEEEeCCCccc-ccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEE
Q 037120 97 PGISALDFDCKGIYLVSATR-SGCLTVHDFESLYY-QCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACA 174 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~-dg~i~vwd~~~~~~-~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~ 174 (489)
..+ +++|+|+|++|++++. ++.|.+||..+... .. ....+... +.+++|+|++..++ ++
T Consensus 41 ~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~--------------~~~~~~~~---~~~~~~s~dg~~l~-~~ 101 (331)
T 3u4y_A 41 DFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVV--------------AIQEGQSS---MADVDITPDDQFAV-TV 101 (331)
T ss_dssp CEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEE--------------EEEECSSC---CCCEEECTTSSEEE-EC
T ss_pred Ccc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEE--------------ecccCCCC---ccceEECCCCCEEE-Ee
Confidence 346 9999999997766665 89999999987443 11 11122222 33499999987444 44
Q ss_pred ecCCC--EEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCc-EEEEECCCCCcCc-e-
Q 037120 175 STRSN--VVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGV-VNIWDRRVGVLPS-L- 249 (489)
Q Consensus 175 ~~d~g--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~-i~iwd~~~~~~~~-~- 249 (489)
..+++ .|.+||+... ..+... . +.....+++|+|+++.++++...++. |.+|++....... .
T Consensus 102 ~~~~~~~~i~v~d~~~~-----~~~~~~-------~-~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~ 168 (331)
T 3u4y_A 102 TGLNHPFNMQSYSFLKN-----KFISTI-------P-IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG 168 (331)
T ss_dssp CCSSSSCEEEEEETTTT-----EEEEEE-------E-CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE
T ss_pred cCCCCcccEEEEECCCC-----CeEEEE-------E-CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC
Confidence 43313 9999999432 222211 1 22356899999999855566667788 9999998643210 0
Q ss_pred eeccCCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCCCcc---cceeecCCccCCCCeeEEEeCCCCcceeeccccce
Q 037120 250 ELSTGSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRGGRT---SAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSK 325 (489)
Q Consensus 250 ~~~~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~~~---~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~ 325 (489)
............++|+|+|+++++++. ++.|++||+.+++. +..+... .. +..++|+|+|+.+......
T Consensus 169 ~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~----~~~~~~spdg~~l~v~~~~-- 241 (331)
T 3u4y_A 169 QEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NL----PGTIVVSRDGSTVYVLTES-- 241 (331)
T ss_dssp EEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SC----CCCEEECTTSSEEEEECSS--
T ss_pred CccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CC----CceEEECCCCCEEEEEEcC--
Confidence 111133456789999999997777665 89999999999887 5555542 23 6677788877754321100
Q ss_pred eeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCC
Q 037120 326 IVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSD 405 (489)
Q Consensus 326 ~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d 405 (489)
...|. +++..++....+......+..... .......++|+|++..+++++..+
T Consensus 242 --~~~i~----------------------~~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~spdg~~l~v~~~~~ 294 (331)
T 3u4y_A 242 --TVDVF----------------------NFNQLSGTLSFVKSFGHGLLIDPR---PLFGANQMALNKTETKLFISANIS 294 (331)
T ss_dssp --EEEEE----------------------EEETTTTEEEEEEEEECCCCCCCG---GGTTCCCEEECTTSSEEEEEETTT
T ss_pred --CCEEE----------------------EEECCCCceeeecccccccccCCC---CcccccceEECCCCCEEEEecCCC
Confidence 00011 111111111000000000000000 000012368899988888888888
Q ss_pred CcEEEEeccCC
Q 037120 406 HGIHLLDFFPG 416 (489)
Q Consensus 406 ~~i~vwd~~~~ 416 (489)
+.|.|||+...
T Consensus 295 ~~v~v~d~~~~ 305 (331)
T 3u4y_A 295 RELKVFTISGK 305 (331)
T ss_dssp TEEEEEETTSC
T ss_pred CcEEEEEecCC
Confidence 99999999876
No 141
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.81 E-value=1.5e-18 Score=164.20 Aligned_cols=296 Identities=9% Similarity=-0.023 Sum_probs=174.9
Q ss_pred cEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCC-CCCceeEEEeeCCCCCEEEEEecCCCEEEEEEec
Q 037120 109 IYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIP-LPQQLDAVRWNLANQDEVACASTRSNVVSIYDIG 187 (489)
Q Consensus 109 ~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~-~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~ 187 (489)
++|++++.++.|.+||..+.+.... .. ..+.. . +..++|+|++..+++++..+ +.|.+||+.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~--------~~-----~~~~~~~---~~~~~~s~dg~~l~v~~~~~-~~v~~~d~~ 64 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKV--------IT-----IADAGPT---PMVPMVAPGGRIAYATVNKS-ESLVKIDLV 64 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEE--------EE-----CTTCTTC---CCCEEECTTSSEEEEEETTT-TEEEEEETT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEE--------EE-----cCCCCCC---ccceEEcCCCCEEEEEeCCC-CeEEEEECC
Confidence 5789999999999999988544331 00 01100 1 55699999997666777666 999999994
Q ss_pred cCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe------------CCCcEEEEECCCCCcCceeeccCC
Q 037120 188 YISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD------------THGVVNIWDRRVGVLPSLELSTGS 255 (489)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s------------~dg~i~iwd~~~~~~~~~~~~~~h 255 (489)
.. ..+...... ....|...+..++|+|+++ .+++++ .++.|.+||+.+++ ....+..
T Consensus 65 ~~-----~~~~~~~~~--~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~--~~~~~~~- 133 (337)
T 1pby_B 65 TG-----ETLGRIDLS--TPEERVKSLFGAALSPDGK-TLAIYESPVRLELTHFEVQPTRVALYDAETLS--RRKAFEA- 133 (337)
T ss_dssp TC-----CEEEEEECC--BTTEEEECTTCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEETTTTE--EEEEEEC-
T ss_pred CC-----CeEeeEEcC--CcccccccccceEECCCCC-EEEEEecccccccccccccCceEEEEECCCCc--EEEEEeC-
Confidence 32 221111100 0011233677899999998 777775 57999999998765 3333322
Q ss_pred CCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceeeccceeEEE
Q 037120 256 HGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSID 335 (489)
Q Consensus 256 ~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~ 335 (489)
...+.+++|+|++++++++ ++.|++||+.+++.+..+..+... . .+.|+|++..+.......... ..+....
T Consensus 134 ~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~--~---~~~~s~dg~~l~~~~~~~~~~-~~~~~~~ 205 (337)
T 1pby_B 134 PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWE--A---ETYAQPDVLAVWNQHESSGVM-ATPFYTA 205 (337)
T ss_dssp CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTT--T---TTBCCCBCCCCCCCCTTTTEE-EEEEEEE
T ss_pred CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccC--C---CceeCCCccEEeeeccCCCce-eeeeecc
Confidence 4567889999999988888 689999999998877666543311 1 226788887653211000000 0001111
Q ss_pred eCCCCCeEEEEEecCCce-EEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEecc
Q 037120 336 LDPSCSYQLAFHLDDGWS-GVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFF 414 (489)
Q Consensus 336 ~~p~~~~~~~~~~~~~w~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~ 414 (489)
...++..... ...+. .+++...+...... +.... .....++|+|++..++++ ++.|++||+.
T Consensus 206 ~~~~~~~~~~---~~~~~v~~~d~~~~~~~~~~-----~~~~~------~~~~~~~~s~dg~~l~~~---~~~v~~~d~~ 268 (337)
T 1pby_B 206 RKDIDPADPT---AYRTGLLTMDLETGEMAMRE-----VRIMD------VFYFSTAVNPAKTRAFGA---YNVLESFDLE 268 (337)
T ss_dssp BTTSCTTSGG---GEEEEEEEEETTTCCEEEEE-----EEECS------SCEEEEEECTTSSEEEEE---ESEEEEEETT
T ss_pred cccccccccc---ccccceEEEeCCCCCceEee-----cCCCC------CceeeEEECCCCCEEEEe---CCeEEEEECC
Confidence 1111000000 00000 12222222111000 00000 011235677776665555 7999999998
Q ss_pred CCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEecccc
Q 037120 415 PGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~~~~ 480 (489)
++ +.+..+. ....+.+++|+|+++.|++++.++.|.+|..+..
T Consensus 269 ~~----------~~~~~~~-------------~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 269 KN----------ASIKRVP-------------LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp TT----------EEEEEEE-------------CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred CC----------cCcceec-------------CCCceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 87 5554443 3346789999999998888899999999986543
No 142
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.81 E-value=4.3e-18 Score=166.15 Aligned_cols=186 Identities=11% Similarity=0.005 Sum_probs=138.7
Q ss_pred ccCCCceeEEEECCCCcEEEEEecCC---eEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCC
Q 037120 93 SFGKPGISALDFDCKGIYLVSATRSG---CLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQD 169 (489)
Q Consensus 93 ~~~~~~V~~~~fs~~g~~la~g~~dg---~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~ 169 (489)
..+...|.+++|+|+|++||+++.++ .|++||+.+.+... +..|... +.+++|+|+++.
T Consensus 175 ~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~---------------l~~~~~~---~~~~~~spdg~~ 236 (415)
T 2hqs_A 175 HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ---------------VASFPRH---NGAPAFSPDGSK 236 (415)
T ss_dssp EEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE---------------EECCSSC---EEEEEECTTSSE
T ss_pred eCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE---------------eecCCCc---ccCEEEcCCCCE
Confidence 34556799999999999999999885 99999998744322 1223333 889999999986
Q ss_pred EEEEEecC-CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeC-CC--cEEEEECCCCC
Q 037120 170 EVACASTR-SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDT-HG--VVNIWDRRVGV 245 (489)
Q Consensus 170 ~l~s~~~d-~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~-dg--~i~iwd~~~~~ 245 (489)
++++++.+ +..|.+||+... .. ..+..|...+.+++|+|+++ .|++++. ++ .|++||+.+++
T Consensus 237 la~~~~~~g~~~i~~~d~~~~-----~~--------~~l~~~~~~~~~~~~spdg~-~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 237 LAFALSKTGSLNLYVMDLASG-----QI--------RQVTDGRSNNTEPTWFPDSQ-NLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp EEEEECTTSSCEEEEEETTTC-----CE--------EECCCCSSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTSSC
T ss_pred EEEEEecCCCceEEEEECCCC-----CE--------EeCcCCCCcccceEECCCCC-EEEEEECCCCCcEEEEEECCCCC
Confidence 66577654 145999998432 11 12356778999999999999 7777775 45 67788988765
Q ss_pred cCceeeccCCCCceeEEEEeecCCEEEEEeCC---CeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceee
Q 037120 246 LPSLELSTGSHGTLNSIQLHAENQIIFAAGKH---GSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGT 319 (489)
Q Consensus 246 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d---g~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~ 319 (489)
.. .+..+...+.+++|+|+|++|++++.+ ..|++||+.+++. ..+..+. . +.+++|+|+|+.+..
T Consensus 303 --~~-~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~----~~~~~~spdg~~l~~ 370 (415)
T 2hqs_A 303 --PQ-RITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-L----DETPSLAPNGTMVIY 370 (415)
T ss_dssp --CE-ECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-S----CEEEEECTTSSEEEE
T ss_pred --EE-EEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-C----cCCeEEcCCCCEEEE
Confidence 22 344567789999999999999988764 6899999998775 3444433 4 899999999987754
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.81 E-value=1.9e-17 Score=156.86 Aligned_cols=165 Identities=13% Similarity=0.090 Sum_probs=112.3
Q ss_pred CCCceeEEEECCCCcEEEEEecC-CeEEEEeCC--CcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 95 GKPGISALDFDCKGIYLVSATRS-GCLTVHDFE--SLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 95 ~~~~V~~~~fs~~g~~la~g~~d-g~i~vwd~~--~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
+...+.+++|+|+|++|++++.+ +.|.+|++. +..... ......+. . +..++|+|++..++
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~------------~~~~~~~~-~---~~~~~~s~dg~~l~ 99 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTF------------AAESALPG-S---LTHISTDHQGQFVF 99 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE------------EEEEECSS-C---CSEEEECTTSSEEE
T ss_pred cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceee------------ccccccCC-C---CcEEEEcCCCCEEE
Confidence 34468899999999999988886 999999997 321111 00111111 2 77899999997555
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe-CCCcEEEEECCC-CCcCce
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD-THGVVNIWDRRV-GVLPSL 249 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s-~dg~i~iwd~~~-~~~~~~ 249 (489)
+++..+ +.|.+||+..+ ......... . ....+.+++|+|+++ .+++++ .++.|++||+.+ ++....
T Consensus 100 ~~~~~~-~~i~~~d~~~~-----~~~~~~~~~----~-~~~~~~~~~~s~dg~-~l~~~~~~~~~v~~~d~~~~~~~~~~ 167 (343)
T 1ri6_A 100 VGSYNA-GNVSVTRLEDG-----LPVGVVDVV----E-GLDGCHSANISPDNR-TLWVPALKQDRICLFTVSDDGHLVAQ 167 (343)
T ss_dssp EEETTT-TEEEEEEEETT-----EEEEEEEEE----C-CCTTBCCCEECTTSS-EEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred EEecCC-CeEEEEECCCC-----ccccccccc----c-CCCCceEEEECCCCC-EEEEecCCCCEEEEEEecCCCceeee
Confidence 555555 99999999411 111111111 2 223588999999998 666666 899999999987 442111
Q ss_pred ---eeccCCCCceeEEEEeecCCEEEEEe-CCCeEEEEEcCC
Q 037120 250 ---ELSTGSHGTLNSIQLHAENQIIFAAG-KHGSIYLWDLRG 287 (489)
Q Consensus 250 ---~~~~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~lwd~~~ 287 (489)
.........+..++|+|+++++++++ .++.|++||+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 168 DPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp EEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred cccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 11222345788999999999887776 599999999964
No 144
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.80 E-value=3.4e-18 Score=186.44 Aligned_cols=180 Identities=9% Similarity=0.032 Sum_probs=138.9
Q ss_pred ceeEEEEC-CCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 98 GISALDFD-CKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 98 ~V~~~~fs-~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
.|.+++|+ |+|++||+++ ++.|.+|+........ ...|.. ..+..++|+ ++. .++.++.
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~---------------~~~~~~--~~~~~~~~s-dg~-~l~~~s~ 356 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK---------------VPEPLR--IRYVRRGGD-TKV-AFIHGTR 356 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE---------------CSCCSC--EEEEEECSS-SEE-EEEEEET
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE---------------ccCCCc--ceEEeeeEc-CCC-eEEEEEC
Confidence 58999999 9999999988 8899999988743222 112222 028889999 876 5555565
Q ss_pred CCCEEE-EEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCC
Q 037120 177 RSNVVS-IYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGS 255 (489)
Q Consensus 177 d~g~i~-vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h 255 (489)
+ +.+. +||+... . .. .+.+|...+..++|+|+++ .|++++.++.|++||+.+++ .......|
T Consensus 357 ~-~~l~~~~d~~~~--~-------~~----~l~~~~~~~~~~~~SpDG~-~la~~~~~~~v~~~d~~tg~--~~~~~~~~ 419 (1045)
T 1k32_A 357 E-GDFLGIYDYRTG--K-------AE----KFEENLGNVFAMGVDRNGK-FAVVANDRFEIMTVDLETGK--PTVIERSR 419 (1045)
T ss_dssp T-EEEEEEEETTTC--C-------EE----ECCCCCCSEEEEEECTTSS-EEEEEETTSEEEEEETTTCC--EEEEEECS
T ss_pred C-CceEEEEECCCC--C-------ce----EecCCccceeeeEECCCCC-EEEEECCCCeEEEEECCCCc--eEEeccCC
Confidence 5 7888 8888322 1 11 1235777899999999999 99999999999999999877 44445578
Q ss_pred CCceeEEEEeecCCEEEEEeCC----------CeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceee
Q 037120 256 HGTLNSIQLHAENQIIFAAGKH----------GSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGT 319 (489)
Q Consensus 256 ~~~v~~~~~~p~~~~l~~~~~d----------g~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~ 319 (489)
...+.+++|+|+|++|++++.+ +.|++||+.+++ +..+..|... +..++|+|+|+.+..
T Consensus 420 ~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~----~~~~~~spdG~~l~~ 488 (1045)
T 1k32_A 420 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSH----DYAPAFDADSKNLYY 488 (1045)
T ss_dssp SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSB----EEEEEECTTSCEEEE
T ss_pred CCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcc----cCCceEcCCCCEEEE
Confidence 8899999999999999888764 499999999877 6666666666 889999999987753
No 145
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.80 E-value=1.2e-17 Score=158.70 Aligned_cols=292 Identities=10% Similarity=0.003 Sum_probs=169.1
Q ss_pred EEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCC-CCCCceeEEEeeCCCCCEEEEEecCCC
Q 037120 101 ALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHI-PLPQQLDAVRWNLANQDEVACASTRSN 179 (489)
Q Consensus 101 ~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~-~~~~~V~~v~~~~~~~~~l~s~~~d~g 179 (489)
.+++++++.++++++.++.|++||..+.+.... . ..+. .. +..++|+|++..++++...+ +
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~--------~------~~~~~~~---~~~~~~s~dg~~~~v~~~~~-~ 65 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKS--------C------VMPDKFG---PGTAMMAPDNRTAYVLNNHY-G 65 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEE--------E------ECSSCCS---SCEEEECTTSSEEEEEETTT-T
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEE--------E------ecCCCCC---CceeEECCCCCEEEEEeCCC-C
Confidence 346889999999999999999999988544331 1 1111 12 56799999987566666656 9
Q ss_pred EEEEEEeccCCCCCceeeeeceeeeeecCCc-----ccCeeEEEEecCCCcEEEEEeCC------------CcEEEEECC
Q 037120 180 VVSIYDIGYISDEPVEVLKTRRSVTVVGSDV-----QKGLSDLAFSAVNTSRLIASDTH------------GVVNIWDRR 242 (489)
Q Consensus 180 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~l~s~s~d------------g~i~iwd~~ 242 (489)
.|.+||+... ....... .++ ...+..++|+|+++ ++++++.+ +.|.+||+.
T Consensus 66 ~i~~~d~~t~-----~~~~~~~------~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~~~~~~~~i~~~d~~ 133 (349)
T 1jmx_B 66 DIYGIDLDTC-----KNTFHAN------LSSVPGEVGRSMYSFAISPDGK-EVYATVNPTQRLNDHYVVKPPRLEVFSTA 133 (349)
T ss_dssp EEEEEETTTT-----EEEEEEE------SCCSTTEEEECSSCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEEGG
T ss_pred cEEEEeCCCC-----cEEEEEE------cccccccccccccceEECCCCC-EEEEEcccccccccccccCCCeEEEEECC
Confidence 9999999432 2221111 111 23478899999999 77777755 899999998
Q ss_pred CCCcC-ceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeecc
Q 037120 243 VGVLP-SLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLK 321 (489)
Q Consensus 243 ~~~~~-~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~ 321 (489)
+++.. .+... .+...+.+++|+|+|+ +++++. .|++||+.+++.+..+..+... .+. .+.++...+-...
T Consensus 134 ~~~~~~~~~~~-~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~ 204 (349)
T 1jmx_B 134 DGLEAKPVRTF-PMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWN--RKG---YSAPDVLYFWPHQ 204 (349)
T ss_dssp GGGGBCCSEEE-ECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCC--CTT---BCCCBCCCCCCCC
T ss_pred Cccccceeeec-cCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccC--Ccc---ccCccceeeecCC
Confidence 75421 22222 2334688999999999 666544 4999999998876665532210 000 0001100000000
Q ss_pred ccceeeccceeEEEeCCCCCeE----------EEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCccee
Q 037120 322 AQSKIVSQEIHSIDLDPSCSYQ----------LAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSW 391 (489)
Q Consensus 322 ~~~~~~~~~i~~~~~~p~~~~~----------~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (489)
... ........+.+++++... +......+-...++... . . .....+++
T Consensus 205 ~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------~-------~~~~~~~~ 262 (349)
T 1jmx_B 205 SPR-HEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD-L-------------T-------ELYFTGLR 262 (349)
T ss_dssp CTT-CEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEE-C-------------S-------SCEEEEEE
T ss_pred Ccc-eeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccccc-C-------------C-------CcceeeEe
Confidence 000 000011233444333111 00111111111111100 0 0 01123456
Q ss_pred ec-CCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcc
Q 037120 392 LS-TNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNS 470 (489)
Q Consensus 392 ~~-~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg 470 (489)
+| ++..++++ ++.|++||+.++ +.+..+. ....+.+++|+|+++.|++++.++
T Consensus 263 sp~dg~~l~~~---~~~v~~~d~~~~----------~~~~~~~-------------~~~~~~~~~~s~dg~~l~~~~~~~ 316 (349)
T 1jmx_B 263 SPKDPNQIYGV---LNRLAKYDLKQR----------KLIKAAN-------------LDHTYYCVAFDKKGDKLYLGGTFN 316 (349)
T ss_dssp CSSCTTEEEEE---ESEEEEEETTTT----------EEEEEEE-------------CSSCCCEEEECSSSSCEEEESBSS
T ss_pred cCCCCCEEEEE---cCeEEEEECccC----------eEEEEEc-------------CCCCccceEECCCCCEEEEecCCC
Confidence 67 65555444 889999999888 5554443 234578999999999888888899
Q ss_pred eeEEEeccc
Q 037120 471 SLLVVSQKQ 479 (489)
Q Consensus 471 ~i~v~~~~~ 479 (489)
.|.+|..+.
T Consensus 317 ~v~v~d~~~ 325 (349)
T 1jmx_B 317 DLAVFNPDT 325 (349)
T ss_dssp EEEEEETTT
T ss_pred eEEEEeccc
Confidence 999998754
No 146
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.79 E-value=3.5e-18 Score=174.67 Aligned_cols=232 Identities=13% Similarity=0.085 Sum_probs=155.3
Q ss_pred ceeEEEECCCCcEEEEEec-CCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 98 GISALDFDCKGIYLVSATR-SGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~-dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
.|.+++|+|||++||.++. ||+++||++++..... +..|. ...|.+++|+|+ .+++++..
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~---------------lt~~~--~~~~~~~~~spd--~~l~~~~~ 83 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK---------------LNREP--INSVLDPHYGVG--RVILVRDV 83 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE---------------CCSSC--CSEECEECTTCS--EEEEEEEC
T ss_pred chheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe---------------eeccc--ccccccccCCCC--eEEEEecc
Confidence 4899999999999999887 9999999986533222 11121 112888999998 47776664
Q ss_pred ---CCCEEEEEEecc--CCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceee
Q 037120 177 ---RSNVVSIYDIGY--ISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLEL 251 (489)
Q Consensus 177 ---d~g~i~vwd~~~--~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 251 (489)
+ ....+|.+.. .... ..+ . ....+...+|+|+++..+++.+.++.+.+||+.+++ ..+.
T Consensus 84 ~~g~-~~~~l~~~~~~~~g~~--~~l----------~-~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~--~~~l 147 (582)
T 3o4h_A 84 SKGA-EQHALFKVNTSRPGEE--QRL----------E-AVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGG--LREL 147 (582)
T ss_dssp STTS-CCEEEEEEETTSTTCC--EEC----------T-TSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTE--EEEE
T ss_pred CCCC-cceEEEEEeccCCCcc--ccc----------c-CCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCc--EEEe
Confidence 3 5677877743 2111 111 1 111344668899987555555555566699998875 3322
Q ss_pred ccCCCCceeEEEEeecCCEEEEEeCC----CeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceee
Q 037120 252 STGSHGTLNSIQLHAENQIIFAAGKH----GSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIV 327 (489)
Q Consensus 252 ~~~h~~~v~~~~~~p~~~~l~~~~~d----g~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~ 327 (489)
.. +.. .+++|+|||+++++++.| +.|++||+.+++. ..+..+... +..++|+|||+
T Consensus 148 ~~-~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~-~~l~~~~~~----~~~~~~SpDG~------------ 207 (582)
T 3o4h_A 148 AR-LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL-RVFDSGEGS----FSSASISPGMK------------ 207 (582)
T ss_dssp EE-ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC-EEECCSSCE----EEEEEECTTSC------------
T ss_pred ec-CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc-eEeecCCCc----cccceECCCCC------------
Confidence 22 222 889999999999988776 7899999988764 344554444 44444444433
Q ss_pred ccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCC-
Q 037120 328 SQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDH- 406 (489)
Q Consensus 328 ~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~- 406 (489)
.++ ++..++
T Consensus 208 --------------~l~--------------------------------------------------------~~~~~~~ 217 (582)
T 3o4h_A 208 --------------VTA--------------------------------------------------------GLETARE 217 (582)
T ss_dssp --------------EEE--------------------------------------------------------EEECSSC
T ss_pred --------------EEE--------------------------------------------------------EccCCCe
Confidence 222 223444
Q ss_pred -cEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEE--------eeCCCCeEEeccCcceeEEEec
Q 037120 407 -GIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACV--------THPLNNTIVAGTKNSSLLVVSQ 477 (489)
Q Consensus 407 -~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va--------~~p~~~~i~sgs~dg~i~v~~~ 477 (489)
.|++||+.++ +.. .+. +|...|.+++ |+|++..+++++.||.+.||..
T Consensus 218 ~~i~~~d~~~~----------~~~-~~~------------~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 218 ARLVTVDPRDG----------SVE-DLE------------LPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEEECTTTC----------CEE-ECC------------CSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred eEEEEEcCCCC----------cEE-Ecc------------CCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 7889999877 444 444 5666666666 9999998999999999999986
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.79 E-value=1.6e-17 Score=173.73 Aligned_cols=288 Identities=14% Similarity=0.059 Sum_probs=166.2
Q ss_pred eeEEEECCCCcEEEEEecCCeEEEEeCCCcccc-cCCCCCCCCCcccccccc--------cCCCCCCceeEEEeeCCCCC
Q 037120 99 ISALDFDCKGIYLVSATRSGCLTVHDFESLYYQ-CNGTLPGVGLKEDQSKHL--------LHIPLPQQLDAVRWNLANQD 169 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~-~~~~~~~~g~~~~~~~~~--------~h~~~~~~V~~v~~~~~~~~ 169 (489)
+..+.|. |..+++++.|+ | +||+.+++.. .. +..+.... ........|.+++|+|+ .
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~--------l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~- 93 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTT--------RFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-G- 93 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CE--------EEEHHHHHTTC-----------CCCEEEEETTT-T-
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEE--------eechhHhhhhccchhccccccccCceeEEECCC-C-
Confidence 5566787 66777778888 8 9999885541 10 11110000 00001123899999999 5
Q ss_pred EEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCC-----C
Q 037120 170 EVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRV-----G 244 (489)
Q Consensus 170 ~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~-----~ 244 (489)
.++.+. ++.|++||+..+ .... +..+...+.+++|+|+|+ .|+++ .|+.|++||+.+ +
T Consensus 94 ~~~~~~--~~~i~~~d~~~~-----~~~~--------l~~~~~~~~~~~~SpdG~-~la~~-~~~~i~v~~~~~~~~~~g 156 (706)
T 2z3z_A 94 LVVLFT--QGGLVGFDMLAR-----KVTY--------LFDTNEETASLDFSPVGD-RVAYV-RNHNLYIARGGKLGEGMS 156 (706)
T ss_dssp EEEEEE--TTEEEEEETTTT-----EEEE--------EECCTTCCTTCEECTTSS-EEEEE-ETTEEEEEECBCTTSCCC
T ss_pred eEEEEE--CCEEEEEECCCC-----ceEE--------ccCCcccccCCcCCCCCC-EEEEE-ECCeEEEEecCcccccCC
Confidence 444444 499999999432 1111 133456788899999999 77775 589999999988 6
Q ss_pred CcCceeeccCCCCc--------------eeEEEEeecCCEEEEEe---------------------------------CC
Q 037120 245 VLPSLELSTGSHGT--------------LNSIQLHAENQIIFAAG---------------------------------KH 277 (489)
Q Consensus 245 ~~~~~~~~~~h~~~--------------v~~~~~~p~~~~l~~~~---------------------------------~d 277 (489)
+ ..+....+... +.+++|+|||++|++++ .+
T Consensus 157 ~--~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~ 234 (706)
T 2z3z_A 157 R--AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH 234 (706)
T ss_dssp C--CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred C--cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence 5 33333333332 48999999999999987 35
Q ss_pred CeEEEEEcCCCcccceee--cCCccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEE
Q 037120 278 GSIYLWDLRGGRTSAPFH--NHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGV 355 (489)
Q Consensus 278 g~i~lwd~~~~~~~~~~~--~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~ 355 (489)
..|++||+.+++...... .+... +.+++|+|||+.++............| .+
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~~~~~~~~~~~~~v----------------------~~ 288 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKF----LTNLSWSPDENILYVAEVNRAQNECKV----------------------NA 288 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCE----EEEEEECTTSSEEEEEEECTTSCEEEE----------------------EE
T ss_pred eEEEEEECCCCceEeeccCCCCcee----EeeEEEECCCCEEEEEEeCCCCCeeEE----------------------EE
Confidence 789999998876533222 33434 788888888876653111000000011 11
Q ss_pred EEeecc-ceeeecC-CCCCCcCCCCccccccCCCcceeec--CCcEEEEeecCCCcEEEEecc-CCCCCCeeeccCcccc
Q 037120 356 LDVYNS-RVSHVHC-PPPAWLSDSNNSADQLHLRKPSWLS--TNSIYAVGSSSDHGIHLLDFF-PGSSSPSHVDYNEDIE 430 (489)
Q Consensus 356 ~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~sgs~d~~i~vwd~~-~~~~~~~~~~~~~~~~ 430 (489)
++..++ ....+.. ....|.. ....+.|+| +| .++++++.|+.++||++. .+ ..+.
T Consensus 289 ~d~~~g~~~~~~~~~~~~~~~~---------~~~~~~~sp~~dg-~~l~~~~~~g~~~l~~~~~~~----------~~~~ 348 (706)
T 2z3z_A 289 YDAETGRFVRTLFVETDKHYVE---------PLHPLTFLPGSNN-QFIWQSRRDGWNHLYLYDTTG----------RLIR 348 (706)
T ss_dssp EETTTCCEEEEEEEEECSSCCC---------CCSCCEECTTCSS-EEEEEECTTSSCEEEEEETTS----------CEEE
T ss_pred EECCCCceeeEEEEccCCCeEC---------ccCCceeecCCCC-EEEEEEccCCccEEEEEECCC----------CEEE
Confidence 121111 1100000 0001110 012357777 65 477888889999999886 44 3444
Q ss_pred hhhHhhhhcccCCcccCCCceEE-EEeeCCCCeEEec-cCcc----eeEEEec
Q 037120 431 SLSERTKLKKENRFVPLSEGVTA-CVTHPLNNTIVAG-TKNS----SLLVVSQ 477 (489)
Q Consensus 431 ~~~~~~~~~~~~~~~~h~~~V~~-va~~p~~~~i~sg-s~dg----~i~v~~~ 477 (489)
.+. +|...|.+ ++|+|+++.|+.+ +.++ .|..|..
T Consensus 349 ~l~------------~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 349 QVT------------KGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp ECC------------CSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred ecC------------CCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 454 67777876 8999999876554 4444 4555543
No 148
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.78 E-value=5.9e-17 Score=170.45 Aligned_cols=272 Identities=13% Similarity=0.078 Sum_probs=176.2
Q ss_pred eeEEEeeCCCCCEEEEEec-CCC-----EEEEEEeccCCCCCceeeeeceeeeeecCCcc--------------------
Q 037120 158 LDAVRWNLANQDEVACAST-RSN-----VVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQ-------------------- 211 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~-d~g-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~-------------------- 211 (489)
|.+++|+|+++ .|++++. | + .|++||+..+. ....+.. ..+.
T Consensus 39 ~~~~~~SpdG~-~la~~~~~d-~~~~~~~i~~~d~~~g~--~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 106 (741)
T 2ecf_A 39 LMKPKVAPDGS-RVTFLRGKD-SDRNQLDLWSYDIGSGQ--TRLLVDS--------KVVLPGTETLSDEEKARRERQRIA 106 (741)
T ss_dssp CEEEEECTTSS-EEEEEECCS-SCTTEEEEEEEETTTCC--EEEEECG--------GGTC--------------------
T ss_pred CCCceEecCCC-EEEEEeccC-CCCcccEEEEEECCCCc--eeEccch--------hhcccccccccchhhhhhhhhhhc
Confidence 88999999997 6666665 6 7 99999995432 1111110 1111
Q ss_pred --cCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCc
Q 037120 212 --KGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGR 289 (489)
Q Consensus 212 --~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~ 289 (489)
..|.+++|+|||+ .|++++. +.|++||+.++..+....+..|...+.+++|+|||++|+.++ ++.|++||+.+++
T Consensus 107 ~~~~v~~~~~SpDg~-~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~ 183 (741)
T 2ecf_A 107 AMTGIVDYQWSPDAQ-RLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGR 183 (741)
T ss_dssp CCEESCCCEECTTSS-EEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTE
T ss_pred cccCcceeEECCCCC-EEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCC
Confidence 3478999999999 8888885 999999999872111223456778899999999999988876 5699999999877
Q ss_pred ccceeecCCccC------------CCCeeEEEeCCCCcceeeccccc---------------------------------
Q 037120 290 TSAPFHNHKEVC------------HLPLTSLKLASMLEKIGTLKAQS--------------------------------- 324 (489)
Q Consensus 290 ~~~~~~~~~~~~------------~~~v~~l~~~~~~~~i~~~~~~~--------------------------------- 324 (489)
.......+.... ...+.+++|+|||+.++......
T Consensus 184 ~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~ 263 (741)
T 2ecf_A 184 QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQV 263 (741)
T ss_dssp EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEE
T ss_pred EEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCee
Confidence 644333322210 00147899999998774421100
Q ss_pred e-------------------eeccceeEEEeCCCCCeEEEEEecCC---ce-EEEEeeccceeeecCCC-CCCcCCCCcc
Q 037120 325 K-------------------IVSQEIHSIDLDPSCSYQLAFHLDDG---WS-GVLDVYNSRVSHVHCPP-PAWLSDSNNS 380 (489)
Q Consensus 325 ~-------------------~~~~~i~~~~~~p~~~~~~~~~~~~~---w~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 380 (489)
. .+...+..+.| |++++++....+.. +. .+++..++....+.... ..|..
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~----- 337 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVP----- 337 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCC-----
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCC-----
Confidence 0 01234678889 99998887765332 11 34444444433222110 01110
Q ss_pred ccccCCCcceeecCCcEEEEeecCCCcEEEEeccC-CCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEE-EeeC
Q 037120 381 ADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFP-GSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTAC-VTHP 458 (489)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v-a~~p 458 (489)
....+.|+|+|. ++++++.|+.++||.+.. + . ...+. .|...|..+ +|+|
T Consensus 338 ----~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~----------~-~~~l~------------~~~~~v~~~~~~s~ 389 (741)
T 2ecf_A 338 ----LHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKG----------K-AAALT------------HGNWSVDELLAVDE 389 (741)
T ss_dssp ----CCSCCEECTTSC-EEEEECTTSSCEEEEECSSS----------C-EEESC------------CSSSCEEEEEEEET
T ss_pred ----cCCceEECCCCe-EEEEecCCCccEEEEEcCCC----------C-eeeee------------ecceEEEeEeEEeC
Confidence 123578999877 777888899888888763 3 3 44444 677788887 5999
Q ss_pred CCCeEE-eccCcc--eeEEEecc
Q 037120 459 LNNTIV-AGTKNS--SLLVVSQK 478 (489)
Q Consensus 459 ~~~~i~-sgs~dg--~i~v~~~~ 478 (489)
+++.|+ +++.++ .+.||...
T Consensus 390 dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 390 KAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp TTTEEEEEECSSCTTCBEEEEEE
T ss_pred CCCEEEEEEeCCCCceEEEEEEE
Confidence 998664 555565 78888653
No 149
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.77 E-value=3.8e-18 Score=167.23 Aligned_cols=170 Identities=10% Similarity=0.069 Sum_probs=121.5
Q ss_pred CCceeEEEECCCCcEEE----EEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 96 KPGISALDFDCKGIYLV----SATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 96 ~~~V~~~~fs~~g~~la----~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
...|.+++|+|+|++|| +|+.|+.|+|||+.+......... ........+.+|... |.+++|+|+...+|
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~---~~~~~~~~~~~h~~~---V~~v~~~p~~~~~l 165 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQK---RPFAYHKLLKDAGGM---VIDMKWNPTVPSMV 165 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSC---CCSEEEECCCSGGGS---EEEEEECSSCTTEE
T ss_pred CCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCc---ceeeeeeccCCCCCc---eEEEEECCCCCCEE
Confidence 34699999999999999 788899999999876311000000 000111122345555 99999999866799
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceee
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLEL 251 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 251 (489)
++++.| |+|++||++.. .. .. ...+|...|++++|+|++. +|++|+.||.|++||++ ++ ....
T Consensus 166 as~s~D-g~v~iwD~~~~-----~~---~~----~~~~~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~-~~--~~~~ 228 (434)
T 2oit_A 166 AVCLAD-GSIAVLQVTET-----VK---VC----ATLPSTVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPT-LQ--EKKV 228 (434)
T ss_dssp EEEETT-SCEEEEEESSS-----EE---EE----EEECGGGCEEEEEECTTSS-CEEEEETTSCEEEECTT-CC--EEEE
T ss_pred EEEECC-CeEEEEEcCCC-----cc---ee----eccCCCCceeEEEEcCCCC-EEEEEcCCCcEEEEccC-Cc--cccc
Confidence 999988 99999999432 11 11 1255888999999999998 99999999999999998 33 1222
Q ss_pred cc-------CCCCceeEEEEeecCCEEEEEeC-CC------eEEEEEcCCC
Q 037120 252 ST-------GSHGTLNSIQLHAENQIIFAAGK-HG------SIYLWDLRGG 288 (489)
Q Consensus 252 ~~-------~h~~~v~~~~~~p~~~~l~~~~~-dg------~i~lwd~~~~ 288 (489)
+. .|...|.+++|++++.++++.+. || .+++||+++.
T Consensus 229 ~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 229 IPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp ECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 21 23448999999998887766543 53 3899999875
No 150
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.77 E-value=9.3e-17 Score=148.47 Aligned_cols=135 Identities=12% Similarity=0.107 Sum_probs=92.3
Q ss_pred EecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEecc-CCCC
Q 037120 114 ATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGY-ISDE 192 (489)
Q Consensus 114 g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~-~~~~ 192 (489)
++.|+.|++||+.+.+... +..|... |.+++|+|++. .|++++ ++.|.+||+.. ..
T Consensus 18 ~~~~~~i~~~d~~~~~~~~---------------~~~~~~~---v~~~~~spdg~-~l~~~~--~~~i~~~d~~~~~~-- 74 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRV---------------VWQTPEL---FEAPNWSPDGK-YLLLNS--EGLLYRLSLAGDPS-- 74 (297)
T ss_dssp CCCCEEEEEEETTTTEEEE---------------EEEESSC---CEEEEECTTSS-EEEEEE--TTEEEEEESSSCCS--
T ss_pred CCcceeEEEEeCCCCceee---------------eccCCcc---eEeeEECCCCC-EEEEEc--CCeEEEEeCCCCCC--
Confidence 4578999999998744332 1224333 89999999987 666666 48999999944 21
Q ss_pred CceeeeeceeeeeecCCc-ccCeeEEEEecCCCcEEEEEe--CCCcEEEEE--CCCCCcCceeeccCCCCceeEEEEeec
Q 037120 193 PVEVLKTRRSVTVVGSDV-QKGLSDLAFSAVNTSRLIASD--THGVVNIWD--RRVGVLPSLELSTGSHGTLNSIQLHAE 267 (489)
Q Consensus 193 ~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~s--~dg~i~iwd--~~~~~~~~~~~~~~h~~~v~~~~~~p~ 267 (489)
.... ..+| ...+.+++|+|+++ .|++++ .++.+.||. +.++. .. .+.. ...+.+++|+|+
T Consensus 75 ~~~~----------~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~l~~~~~~~~~--~~-~~~~-~~~~~~~~~spd 139 (297)
T 2ojh_A 75 PEKV----------DTGFATICNNDHGISPDGA-LYAISDKVEFGKSAIYLLPSTGGT--PR-LMTK-NLPSYWHGWSPD 139 (297)
T ss_dssp CEEC----------CCTTCCCBCSCCEECTTSS-EEEEEECTTTSSCEEEEEETTCCC--CE-ECCS-SSSEEEEEECTT
T ss_pred ceEe----------ccccccccccceEECCCCC-EEEEEEeCCCCcceEEEEECCCCc--eE-Eeec-CCCccceEECCC
Confidence 1010 1223 46789999999999 888888 334555554 44433 22 2323 335889999999
Q ss_pred CCEEE-EEeCCCeEEEEEcC
Q 037120 268 NQIIF-AAGKHGSIYLWDLR 286 (489)
Q Consensus 268 ~~~l~-~~~~dg~i~lwd~~ 286 (489)
++.++ +++.|+.++||+++
T Consensus 140 g~~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 140 GKSFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp SSEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEEECCCCceEEEEEE
Confidence 99887 56679999999865
No 151
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.76 E-value=6.5e-17 Score=169.55 Aligned_cols=143 Identities=11% Similarity=0.093 Sum_probs=95.7
Q ss_pred EEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec----
Q 037120 101 ALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST---- 176 (489)
Q Consensus 101 ~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~---- 176 (489)
+++|+|+|++++++ .|+.|++||+.+...... .. .|......|.+++|+|+++ .|+.++.
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~--------~~------~~~~~~~~~~~~~~SpDg~-~la~~~~~~~~ 83 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTI--------LS------NRTMKSVNASNYGLSPDRQ-FVYLESDYSKL 83 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEE--------EC------HHHHHTTTCSEEEECTTSS-EEEEEEEEEEC
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEE--------Ec------cccccccceeeEEECCCCC-eEEEEecCcee
Confidence 66899999766554 699999999988544331 11 1111011277899999997 5555543
Q ss_pred -----CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceee
Q 037120 177 -----RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLEL 251 (489)
Q Consensus 177 -----d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 251 (489)
+ +.|++||+..+. .+.... ....+..++|+|||+ .|+.+. |+.|++||+.+++ ..+.
T Consensus 84 ~~~s~~-~~i~~~d~~~g~-----~~~~~~--------l~~~~~~~~~SPDG~-~la~~~-~~~i~~~~~~~g~--~~~l 145 (719)
T 1z68_A 84 WRYSYT-ATYYIYDLSNGE-----FVRGNE--------LPRPIQYLCWSPVGS-KLAYVY-QNNIYLKQRPGDP--PFQI 145 (719)
T ss_dssp SSSCEE-EEEEEEETTTTE-----ECCSSC--------CCSSBCCEEECSSTT-CEEEEE-TTEEEEESSTTSC--CEEC
T ss_pred EEeecc-eEEEEEECCCCc-----ccccee--------cCcccccceECCCCC-EEEEEE-CCeEEEEeCCCCC--cEEE
Confidence 4 899999994332 110011 113688899999999 788776 7899999998876 2222
Q ss_pred c-cCCCCce-----------------eEEEEeecCCEEEEEeCC
Q 037120 252 S-TGSHGTL-----------------NSIQLHAENQIIFAAGKH 277 (489)
Q Consensus 252 ~-~~h~~~v-----------------~~~~~~p~~~~l~~~~~d 277 (489)
. .++...| .+++|+|||+.|++++.|
T Consensus 146 ~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 146 TFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp CCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred ecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 2 2322222 489999999999998764
No 152
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.76 E-value=3.4e-17 Score=171.80 Aligned_cols=274 Identities=12% Similarity=0.043 Sum_probs=170.6
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCccc---CeeEEEEecCCCcEEEEEeCC-
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQK---GLSDLAFSAVNTSRLIASDTH- 233 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~l~s~s~d- 233 (489)
+.+++|+|+++ ++++ +.| |+|++||+..+... .. +.+|.. .|.+++|+|||+ .|++++.+
T Consensus 19 ~~~~~~spdg~-~~~~-~~d-g~i~~~d~~~g~~~--~~----------~~~~~~~~~~v~~~~~SpDg~-~l~~~~~~~ 82 (723)
T 1xfd_A 19 DPEAKWISDTE-FIYR-EQK-GTVRLWNVETNTST--VL----------IEGKKIESLRAIRYEISPDRE-YALFSYNVE 82 (723)
T ss_dssp CCCCCBSSSSC-BCCC-CSS-SCEEEBCGGGCCCE--EE----------ECTTTTTTTTCSEEEECTTSS-EEEEEESCC
T ss_pred ccccEEcCCCc-EEEE-eCC-CCEEEEECCCCcEE--EE----------eccccccccccceEEECCCCC-EEEEEecCc
Confidence 56699999997 5555 555 99999999543211 11 133433 499999999999 88888764
Q ss_pred --------CcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccC----
Q 037120 234 --------GVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVC---- 301 (489)
Q Consensus 234 --------g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~---- 301 (489)
+.|++||+.+++...+.....|...+..++|+|||+.|+.++. +.|++||+.+++.......+....
T Consensus 83 ~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g 161 (723)
T 1xfd_A 83 PIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNG 161 (723)
T ss_dssp CCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEE
T ss_pred cceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECc
Confidence 7888999998763223223345556899999999999988875 799999999887654444332220
Q ss_pred ----------CCCeeEEEeCCCCcceeecccc------------------------------------ce----------
Q 037120 302 ----------HLPLTSLKLASMLEKIGTLKAQ------------------------------------SK---------- 325 (489)
Q Consensus 302 ----------~~~v~~l~~~~~~~~i~~~~~~------------------------------------~~---------- 325 (489)
...+.+++|+|||+.++..... ..
T Consensus 162 ~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~ 241 (723)
T 1xfd_A 162 LSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHD 241 (723)
T ss_dssp ECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCC
T ss_pred ccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCcee
Confidence 0013789999999877432110 00
Q ss_pred --e--e------ccceeEEEeCCCCCeEEEEEecCCc---eEEEEeeccceeeecCC-CCCCcCCCCccccccCCCccee
Q 037120 326 --I--V------SQEIHSIDLDPSCSYQLAFHLDDGW---SGVLDVYNSRVSHVHCP-PPAWLSDSNNSADQLHLRKPSW 391 (489)
Q Consensus 326 --~--~------~~~i~~~~~~p~~~~~~~~~~~~~w---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 391 (489)
. . ...+..+.|+|+++.++.....+.. ..+++..++....+... ...|... ....+.|
T Consensus 242 ~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~--------~~~~~~~ 313 (723)
T 1xfd_A 242 LEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHR--------QNEEPVF 313 (723)
T ss_dssp EECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCC--------CCCCCEE
T ss_pred EEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEec--------cCCCceE
Confidence 0 0 2246678999999877665544321 23444444443332110 0011110 0124789
Q ss_pred ecCCcEEEEe-ecCCC------cEEEEec-cCCCCCCeeeccCcc--cchhhHhhhhcccCCcccCCCceE-EEEeeCCC
Q 037120 392 LSTNSIYAVG-SSSDH------GIHLLDF-FPGSSSPSHVDYNED--IESLSERTKLKKENRFVPLSEGVT-ACVTHPLN 460 (489)
Q Consensus 392 ~~~~~~~l~s-gs~d~------~i~vwd~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~h~~~V~-~va~~p~~ 460 (489)
+|+|..+++. +..|+ .|++||+ ..+ +. ...+. .+...+. .++|+|++
T Consensus 314 spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~----------~~~~~~~l~------------~~~~~~~~~~~~spdg 371 (723)
T 1xfd_A 314 SKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNS----------SNDNIQSIT------------SGDWDVTKILAYDEKG 371 (723)
T ss_dssp CTTSCSEEEEEEECCSSSSCEEEEEEECSSCCS----------SSCCCCBSC------------CSSSCEEEEEEEETTT
T ss_pred cCCCCeEEEEEecccCCCcceeEEEEEeccCCC----------CccceeEee------------cCCeEEEeeeEEcCCC
Confidence 9998877765 56676 5777773 433 20 22232 2333444 47999999
Q ss_pred CeEEeccCc---ceeEEEecc
Q 037120 461 NTIVAGTKN---SSLLVVSQK 478 (489)
Q Consensus 461 ~~i~sgs~d---g~i~v~~~~ 478 (489)
+.|+..+.+ +.+.||...
T Consensus 372 ~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 372 NKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp TEEEEEESSSCTTCCEEEEEC
T ss_pred CEEEEEEcCCCCcceEEEEEe
Confidence 988765544 788888753
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.73 E-value=2.7e-16 Score=164.85 Aligned_cols=191 Identities=7% Similarity=0.007 Sum_probs=123.1
Q ss_pred ceeEEEECCCCcEEEEEec---------CCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCC
Q 037120 98 GISALDFDCKGIYLVSATR---------SGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQ 168 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~---------dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~ 168 (489)
.|.+++|||||++||.++. ++.|++||+.+.+..... .+ . .. +.+++|+|+++
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~------~l---~------~~---~~~~~~SPDG~ 122 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGN------EL---P------RP---IQYLCWSPVGS 122 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS------CC---C------SS---BCCEEECSSTT
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccce------ec---C------cc---cccceECCCCC
Confidence 4889999999999999887 789999999885542100 01 0 11 77799999997
Q ss_pred CEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccC---------eeEEEEecCCCcEEEEEeCCC-----
Q 037120 169 DEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKG---------LSDLAFSAVNTSRLIASDTHG----- 234 (489)
Q Consensus 169 ~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~---------v~~~~~~~~~~~~l~s~s~dg----- 234 (489)
.|+.+. ++.|++||+..+.. ..+..... ....+.+|... ..+++|+|||+ .|++++.|.
T Consensus 123 -~la~~~--~~~i~~~~~~~g~~--~~l~~~~~-~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~-~la~~~~d~~~~~~ 195 (719)
T 1z68_A 123 -KLAYVY--QNNIYLKQRPGDPP--FQITFNGR-ENKIFNGIPDWVYEEEMLATKYALWWSPNGK-FLAYAEFNDTDIPV 195 (719)
T ss_dssp -CEEEEE--TTEEEEESSTTSCC--EECCCCCB-TTTEEESSCCHHHHHHTTCSSCCEEECTTSS-EEEEEEEECTTSCE
T ss_pred -EEEEEE--CCeEEEEeCCCCCc--EEEecCCC-cCCeEcccccceeeeecccCcccEEECCCCC-EEEEEEECCCCCce
Confidence 555555 48999999954321 11110000 00000223222 25899999999 888877552
Q ss_pred -----------------------------cEEEEECCCCCcC---ce---eeccCCCCceeEEEEeecCCEEEEEeCC--
Q 037120 235 -----------------------------VVNIWDRRVGVLP---SL---ELSTGSHGTLNSIQLHAENQIIFAAGKH-- 277 (489)
Q Consensus 235 -----------------------------~i~iwd~~~~~~~---~~---~~~~~h~~~v~~~~~~p~~~~l~~~~~d-- 277 (489)
.|++||+.+++.. .+ ..+.+|...+.+++|+||++++++....
T Consensus 196 ~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~ 275 (719)
T 1z68_A 196 IAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQ 275 (719)
T ss_dssp EEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESST
T ss_pred EEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEecccc
Confidence 7889999876520 01 1233678889999999998877764432
Q ss_pred --CeEEEEE----cCCCccccee----ecCCccCCCCee-----EEEeCCCCcce
Q 037120 278 --GSIYLWD----LRGGRTSAPF----HNHKEVCHLPLT-----SLKLASMLEKI 317 (489)
Q Consensus 278 --g~i~lwd----~~~~~~~~~~----~~~~~~~~~~v~-----~l~~~~~~~~i 317 (489)
..|.+|| +.+++....+ ..|... +. .+.|+|||+.+
T Consensus 276 ~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~spdg~~l 326 (719)
T 1z68_A 276 NVSVLSICDFREDWQTWDCPKTQEHIEESRTGW----AGGFFVSTPVFSYDAISY 326 (719)
T ss_dssp TEEEEEEEEECSSSSSEECCGGGEEEEECSSSC----SSSSSCCCCEECTTSSCE
T ss_pred CeEEEEEEcccCCCCCCceEEEEecccccCCce----EccccCCccEECCCCCeE
Confidence 3588999 8777765555 344444 43 55666666543
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.73 E-value=3.7e-15 Score=142.59 Aligned_cols=173 Identities=7% Similarity=0.038 Sum_probs=108.1
Q ss_pred CCceeEEEECCCCcEEEEEecC----CeEEEEeCCCc--ccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCC
Q 037120 96 KPGISALDFDCKGIYLVSATRS----GCLTVHDFESL--YYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQD 169 (489)
Q Consensus 96 ~~~V~~~~fs~~g~~la~g~~d----g~i~vwd~~~~--~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~ 169 (489)
...+..++|+|+|++|++++.+ +.|.+|++... .... ......+... ...+++ ++..
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~------------~~~~~~~~~~---p~~~~~--dg~~ 111 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHL------------LNTQKTMGAD---PCYLTT--NGKN 111 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEE------------EEEEECSSSC---EEEEEE--CSSE
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEE------------eeEeccCCCC---cEEEEE--CCCE
Confidence 3457789999999999999886 89999988752 1111 0000111112 566777 6654
Q ss_pred EEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeee------cCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCC
Q 037120 170 EVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVV------GSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRV 243 (489)
Q Consensus 170 ~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~------~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~ 243 (489)
++++...+ +.|.+|++...... ..+ ....... ...+...+.+++|+|+++.++++...++.|.+|++..
T Consensus 112 l~~~~~~~-~~v~~~~~~~~g~~--~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~ 186 (361)
T 3scy_A 112 IVTANYSG-GSITVFPIGQDGAL--LPA--SDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINP 186 (361)
T ss_dssp EEEEETTT-TEEEEEEBCTTSCB--CSC--SEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEEEECCC-CEEEEEEeCCCCcC--ccc--ceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcC
Confidence 44444444 99999999532111 000 0000000 0112345688999999993444444689999999876
Q ss_pred CCc----C-c------eeeccCCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCCCcc
Q 037120 244 GVL----P-S------LELSTGSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRGGRT 290 (489)
Q Consensus 244 ~~~----~-~------~~~~~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~~~ 290 (489)
... . . ......+......++|+|+|+++++++. ++.|.+||+.+++.
T Consensus 187 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~ 245 (361)
T 3scy_A 187 NANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGML 245 (361)
T ss_dssp TCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEE
T ss_pred CCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCce
Confidence 442 1 0 1112244556789999999999888874 99999999987643
No 155
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.71 E-value=4.7e-15 Score=143.19 Aligned_cols=286 Identities=9% Similarity=-0.033 Sum_probs=161.8
Q ss_pred EEECCCCcEEEEEec-CCe--EEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCC
Q 037120 102 LDFDCKGIYLVSATR-SGC--LTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRS 178 (489)
Q Consensus 102 ~~fs~~g~~la~g~~-dg~--i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~ 178 (489)
.+|+|||++||.++. +|. |.+||+.+.+.... . .++... +..++|+|+++ .|+.++.+
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~l--------t------~~~~~~---~~~~~~spdg~-~l~~~~~~- 101 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQL--------T------EGRGDN---TFGGFLSPDDD-ALFYVKDG- 101 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEEC--------C------CSSCBC---SSSCEECTTSS-EEEEEETT-
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEe--------e------eCCCCC---ccceEEcCCCC-EEEEEeCC-
Confidence 789999999999988 674 77888877444331 1 112222 33478999997 55555555
Q ss_pred CEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEE--EecCCCcEEEEE----------------------eCCC
Q 037120 179 NVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLA--FSAVNTSRLIAS----------------------DTHG 234 (489)
Q Consensus 179 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~--~~~~~~~~l~s~----------------------s~dg 234 (489)
+.|.+||+..+... .+. ..+...+.... ++|++. +++.. ..+.
T Consensus 102 ~~l~~~d~~~g~~~--~~~----------~~~~~~~~~~~~~~~~dg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
T 3pe7_A 102 RNLMRVDLATLEEN--VVY----------QVPAEWVGYGTWVANSDCT-KLVGIEIRREDWVPLTDWKKFHEFYFTKPCC 168 (388)
T ss_dssp TEEEEEETTTCCEE--EEE----------ECCTTEEEEEEEEECTTSS-EEEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred CeEEEEECCCCcce--eee----------echhhcccccceeECCCCC-eeccccccCcccccccccchhhhhhccCCcc
Confidence 89999999543111 111 11223333333 478888 66532 2447
Q ss_pred cEEEEECCCCCcCceeeccCCCCceeEEEEee-cCCEEEEEeCC------CeEEEEEcCCCcccceeecCCccCCCCeeE
Q 037120 235 VVNIWDRRVGVLPSLELSTGSHGTLNSIQLHA-ENQIIFAAGKH------GSIYLWDLRGGRTSAPFHNHKEVCHLPLTS 307 (489)
Q Consensus 235 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~~~~~d------g~i~lwd~~~~~~~~~~~~~~~~~~~~v~~ 307 (489)
.|.+||+.+++. . .+..+...+..++|+| +|+.|+.+..+ ..|.++|+..++. ..+..+... ..+..
T Consensus 169 ~l~~~d~~~g~~--~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~--~~~~~ 242 (388)
T 3pe7_A 169 RLMRVDLKTGES--T-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEG--ESCTH 242 (388)
T ss_dssp EEEEEETTTCCE--E-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTT--EEEEE
T ss_pred eEEEEECCCCce--E-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCC--ccccc
Confidence 899999998762 2 3334566789999999 99988877653 3788888776543 333332210 12677
Q ss_pred EEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCC
Q 037120 308 LKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLR 387 (489)
Q Consensus 308 l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (489)
+.|+|||+.++....... ... ..+.....+.+-...+....+.... .+ ...
T Consensus 243 ~~~spdg~~l~~~~~~~~--~~~----------~~l~~~d~~~g~~~~l~~~~~~~~~------~~-----------~~~ 293 (388)
T 3pe7_A 243 EFWVPDGSALVYVSYLKG--SPD----------RFIYSADPETLENRQLTSMPACSHL------MS-----------NYD 293 (388)
T ss_dssp EEECTTSSCEEEEEEETT--CCC----------EEEEEECTTTCCEEEEEEECCEEEE------EE-----------CTT
T ss_pred ceECCCCCEEEEEecCCC--CCc----------ceEEEEecCCCceEEEEcCCCceee------ee-----------cCC
Confidence 888888876643211000 000 0011111111100011111110000 00 011
Q ss_pred cceeecCCcEEEEee--------cCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCC----------
Q 037120 388 KPSWLSTNSIYAVGS--------SSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSE---------- 449 (489)
Q Consensus 388 ~~~~~~~~~~~l~sg--------s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---------- 449 (489)
...|+|+|..++++. ..+..|++||+.++ +. ..+. .|..
T Consensus 294 ~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~----------~~-~~l~------------~~~~~~~~~~~~~~ 350 (388)
T 3pe7_A 294 GSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNG----------TQ-HRVA------------RHDTSWKVFEGDRQ 350 (388)
T ss_dssp SSEEEEEECCC------------CCCCEEEEEETTTT----------EE-EEEE------------ECCCCCCCBTTBSS
T ss_pred CCeEccCCCcceeEeeeccccccCCCCEEEEEeccCC----------ce-EEec------------cccCcccccccccc
Confidence 236788877666543 45679999999877 33 2222 2333
Q ss_pred -ceEEEEeeCCCCeEEecc-CcceeEEEec
Q 037120 450 -GVTACVTHPLNNTIVAGT-KNSSLLVVSQ 477 (489)
Q Consensus 450 -~V~~va~~p~~~~i~sgs-~dg~i~v~~~ 477 (489)
.+.+++|+|+++.|+..+ .+|...||.-
T Consensus 351 ~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 351 VTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp TTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred cCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 578899999998777554 5787777754
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.71 E-value=8e-15 Score=140.24 Aligned_cols=290 Identities=7% Similarity=0.046 Sum_probs=157.1
Q ss_pred CCCcEEEEEe----cCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecC---C
Q 037120 106 CKGIYLVSAT----RSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTR---S 178 (489)
Q Consensus 106 ~~g~~la~g~----~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d---~ 178 (489)
+...++..|+ .++.|.+|+++... |.+...... +... +..++|+|+++ .|++++.+ +
T Consensus 11 ~~~~~~~vg~y~~~~~~~i~~~~~d~~~----------g~~~~~~~~--~~~~---p~~l~~spdg~-~l~~~~~~~~~~ 74 (361)
T 3scy_A 11 DSELTMLVGTYTSGNSKGIYTFRFNEET----------GESLPLSDA--EVAN---PSYLIPSADGK-FVYSVNEFSKDQ 74 (361)
T ss_dssp GGEEEEEEEECCSSSCCEEEEEEEETTT----------CCEEEEEEE--ECSC---CCSEEECTTSS-EEEEEECCSSTT
T ss_pred CCceEEEEEeccCCCCCCEEEEEEeCCC----------CCEEEeecc--cCCC---CceEEECCCCC-EEEEEEccCCCC
Confidence 3444566664 35689999875411 011111111 3333 55699999987 45555532 2
Q ss_pred CEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe-CCCcEEEEECCCCCcC-ce-eec--c
Q 037120 179 NVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD-THGVVNIWDRRVGVLP-SL-ELS--T 253 (489)
Q Consensus 179 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~-~~-~~~--~ 253 (489)
+.|.+|++...... +...... ..+......+++ +++ .|++++ .++.|.+||+...... .+ ... .
T Consensus 75 ~~v~~~~~~~~~g~----~~~~~~~----~~~~~~p~~~~~--dg~-~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~ 143 (361)
T 3scy_A 75 AAVSAFAFDKEKGT----LHLLNTQ----KTMGADPCYLTT--NGK-NIVTANYSGGSITVFPIGQDGALLPASDVIEFK 143 (361)
T ss_dssp CEEEEEEEETTTTE----EEEEEEE----ECSSSCEEEEEE--CSS-EEEEEETTTTEEEEEEBCTTSCBCSCSEEEECC
T ss_pred CcEEEEEEeCCCCc----EEEeeEe----ccCCCCcEEEEE--CCC-EEEEEECCCCEEEEEEeCCCCcCcccceeEEcc
Confidence 79999999532111 1111111 223446677777 777 555555 7899999999754321 11 100 0
Q ss_pred --------CCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCCCcc------cc------eee-cCCccCCCCeeEEEeC
Q 037120 254 --------GSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRGGRT------SA------PFH-NHKEVCHLPLTSLKLA 311 (489)
Q Consensus 254 --------~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~~~------~~------~~~-~~~~~~~~~v~~l~~~ 311 (489)
.+...+.+++|+|+|+++++++. ++.|++|++..... +. .+. ..... ...++|+
T Consensus 144 g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~s 219 (361)
T 3scy_A 144 GSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSG----PRHLIFN 219 (361)
T ss_dssp CCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCC----EEEEEEC
T ss_pred CCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCC----CeEEEEc
Confidence 11234578999999998877765 89999999876431 11 111 11111 4445555
Q ss_pred CCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCccee
Q 037120 312 SMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSW 391 (489)
Q Consensus 312 ~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (489)
|+| +++++....++-..+++...+....+.... ...... .....++|
T Consensus 220 pdg--------------------------~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~-~~~~~~------~~~~~i~~ 266 (361)
T 3scy_A 220 SDG--------------------------KFAYLINEIGGTVIAFRYADGMLDEIQTVA-ADTVNA------QGSGDIHL 266 (361)
T ss_dssp TTS--------------------------SEEEEEETTTCEEEEEEEETTEEEEEEEEE-SCSSCC------CCEEEEEE
T ss_pred CCC--------------------------CEEEEEcCCCCeEEEEEecCCceEEeEEEe-cCCCCC------CCcccEEE
Confidence 554 444433322222223333332221111100 000000 01134678
Q ss_pred ecCCcEEEEeecC-CCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEecc-Cc
Q 037120 392 LSTNSIYAVGSSS-DHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGT-KN 469 (489)
Q Consensus 392 ~~~~~~~l~sgs~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs-~d 469 (489)
+|+|..++++... ++.|.+|++....... +.+..+. . ...+.+++|+|++++|++++ .+
T Consensus 267 spdg~~l~v~~~~~~~~i~v~~~~~~~g~~------~~~~~~~------------~-g~~~~~~~~spdg~~l~~~~~~~ 327 (361)
T 3scy_A 267 SPDGKYLYASNRLKADGVAIFKVDETNGTL------TKVGYQL------------T-GIHPRNFIITPNGKYLLVACRDT 327 (361)
T ss_dssp CTTSSEEEEEECSSSCEEEEEEECTTTCCE------EEEEEEE------------C-SSCCCEEEECTTSCEEEEEETTT
T ss_pred CCCCCEEEEECCCCCCEEEEEEEcCCCCcE------EEeeEec------------C-CCCCceEEECCCCCEEEEEECCC
Confidence 8888877777776 7899999996320000 1122222 2 34678999999999777776 67
Q ss_pred ceeEEEecc
Q 037120 470 SSLLVVSQK 478 (489)
Q Consensus 470 g~i~v~~~~ 478 (489)
+.|.+|...
T Consensus 328 ~~v~v~~~d 336 (361)
T 3scy_A 328 NVIQIFERD 336 (361)
T ss_dssp TEEEEEEEC
T ss_pred CCEEEEEEE
Confidence 999997543
No 157
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.70 E-value=3.3e-15 Score=142.18 Aligned_cols=243 Identities=13% Similarity=0.097 Sum_probs=155.6
Q ss_pred eeEEEeeCCCCCEEEEEec------CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe
Q 037120 158 LDAVRWNLANQDEVACAST------RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD 231 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~------d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s 231 (489)
+..++|+|++..++++... + +.|.+||.... +.+.... ....+..++|+|+++.++++..
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~~~~~~~-~~v~~~d~~~~-----~~~~~~~--------~~~~~~~~~~s~dg~~l~v~~~ 108 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQSRKLDKG-GVVYRLDPVTL-----EVTQAIH--------NDLKPFGATINNTTQTLWFGNT 108 (353)
T ss_dssp EEEEEEETTTTEEEEEECCCTTTEES-EEEEEECTTTC-----CEEEEEE--------ESSCCCSEEEETTTTEEEEEET
T ss_pred ccceEECCCCCEEEEEcCCCcCCCCC-ccEEEEcCCCC-----eEEEEEe--------cCCCcceEEECCCCCEEEEEec
Confidence 7789999998756555533 4 79999998432 2222111 1234678999999984555666
Q ss_pred CCCcEEEEECCCCCcCceeeccCCCC---------ceeEEEEeecCCEEEEEe--CCCeEEEEEcCCCcccceeecCCcc
Q 037120 232 THGVVNIWDRRVGVLPSLELSTGSHG---------TLNSIQLHAENQIIFAAG--KHGSIYLWDLRGGRTSAPFHNHKEV 300 (489)
Q Consensus 232 ~dg~i~iwd~~~~~~~~~~~~~~h~~---------~v~~~~~~p~~~~l~~~~--~dg~i~lwd~~~~~~~~~~~~~~~~ 300 (489)
.++.|.+||..+++ .+..+..+.. .+.+++|+|+++++++++ .++.|.+||+.+++.+..+..+...
T Consensus 109 ~~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 186 (353)
T 3vgz_A 109 VNSAVTAIDAKTGE--VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKM 186 (353)
T ss_dssp TTTEEEEEETTTCC--EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTT
T ss_pred CCCEEEEEeCCCCe--eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCc
Confidence 78999999999876 4333333221 268899999999888876 3889999999998877777644433
Q ss_pred CCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCcc
Q 037120 301 CHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNS 380 (489)
Q Consensus 301 ~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (489)
+..++|+|+++.+..... + ..+. +++..++........... ...
T Consensus 187 ----~~~~~~s~dg~~l~~~~~----------------~-~~i~----------~~d~~~~~~~~~~~~~~~-~~~---- 230 (353)
T 3vgz_A 187 ----STGLALDSEGKRLYTTNA----------------D-GELI----------TIDTADNKILSRKKLLDD-GKE---- 230 (353)
T ss_dssp ----CCCCEEETTTTEEEEECT----------------T-SEEE----------EEETTTTEEEEEEECCCS-SSC----
T ss_pred ----cceEEECCCCCEEEEEcC----------------C-CeEE----------EEECCCCeEEEEEEcCCC-CCC----
Confidence 667777777765542110 0 0111 122212211111100000 000
Q ss_pred ccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCC
Q 037120 381 ADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLN 460 (489)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~ 460 (489)
.....++|.|++..++++...++.|++||..++ +.+..+. ... ..+++|+|++
T Consensus 231 ---~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~----------~~~~~~~------------~~~--~~~~~~s~dg 283 (353)
T 3vgz_A 231 ---HFFINISLDTARQRAFITDSKAAEVLVVDTRNG----------NILAKVA------------APE--SLAVLFNPAR 283 (353)
T ss_dssp ---CCEEEEEEETTTTEEEEEESSSSEEEEEETTTC----------CEEEEEE------------CSS--CCCEEEETTT
T ss_pred ---cccceEEECCCCCEEEEEeCCCCEEEEEECCCC----------cEEEEEE------------cCC--CceEEECCCC
Confidence 011236788888888888878899999999888 5555444 111 2569999999
Q ss_pred C-eEEeccCcceeEEEeccc
Q 037120 461 N-TIVAGTKNSSLLVVSQKQ 479 (489)
Q Consensus 461 ~-~i~sgs~dg~i~v~~~~~ 479 (489)
+ .++++..++.|.+|..+.
T Consensus 284 ~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 284 NEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp TEEEEEETTTTEEEEEETTT
T ss_pred CEEEEEECCCCeEEEEECCC
Confidence 8 556666799999998654
No 158
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.70 E-value=7.2e-15 Score=154.30 Aligned_cols=181 Identities=10% Similarity=0.007 Sum_probs=121.9
Q ss_pred eeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCce--eEEEeeCCCCCEEEEEec
Q 037120 99 ISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQL--DAVRWNLANQDEVACAST 176 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V--~~v~~~~~~~~~l~s~~~ 176 (489)
..+++|+|||++|+++ ||.|++||+.++.+... +.+|......+ ..++|+|+++.+ +.++.
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~Spdg~~l-~~~~~ 81 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVF--------------LENSTFDEFGHSINDYSISPDGQFI-LLEYN 81 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEE--------------ECTTTTTTCCSCCCEEEECTTSSEE-EEEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCceEEE--------------EechhhhhhcccccceEECCCCCEE-EEEEC
Confidence 5578999999999987 99999999988554321 12222222222 448999999744 44443
Q ss_pred C--------CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCc
Q 037120 177 R--------SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPS 248 (489)
Q Consensus 177 d--------~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 248 (489)
+ .+.+.+||+..+. . ..+..|...+...+|+|||+ .|+.+. |+.|++||+.+++ .
T Consensus 82 ~~~~~r~~~~~~~~~~d~~~~~-----~--------~~l~~~~~~~~~~~~SPdG~-~la~~~-~~~i~~~~~~~~~--~ 144 (740)
T 4a5s_A 82 YVKQWRHSYTASYDIYDLNKRQ-----L--------ITEERIPNNTQWVTWSPVGH-KLAYVW-NNDIYVKIEPNLP--S 144 (740)
T ss_dssp EEECSSSCEEEEEEEEETTTTE-----E--------CCSSCCCTTEEEEEECSSTT-CEEEEE-TTEEEEESSTTSC--C
T ss_pred CeeeEEEccceEEEEEECCCCc-----E--------EEcccCCCcceeeEECCCCC-EEEEEE-CCeEEEEECCCCc--e
Confidence 2 0456799994331 1 11255667899999999999 777775 7899999998876 2
Q ss_pred eee-ccCCCCce-----------------eEEEEeecCCEEEEEeCC-C-------------------------------
Q 037120 249 LEL-STGSHGTL-----------------NSIQLHAENQIIFAAGKH-G------------------------------- 278 (489)
Q Consensus 249 ~~~-~~~h~~~v-----------------~~~~~~p~~~~l~~~~~d-g------------------------------- 278 (489)
.+. ..++...+ ..+.|+|||+.|+.++.| +
T Consensus 145 ~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~ 224 (740)
T 4a5s_A 145 YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAV 224 (740)
T ss_dssp EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSC
T ss_pred EEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCc
Confidence 222 12332222 358999999999887532 1
Q ss_pred ----eEEEEEcCC---Ccc--cceee------cCCccCCCCeeEEEeCCCCcce
Q 037120 279 ----SIYLWDLRG---GRT--SAPFH------NHKEVCHLPLTSLKLASMLEKI 317 (489)
Q Consensus 279 ----~i~lwd~~~---~~~--~~~~~------~~~~~~~~~v~~l~~~~~~~~i 317 (489)
.|++||+.+ ++. ...+. ++... +..++|+|||+.+
T Consensus 225 ~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~wspdg~~~ 274 (740)
T 4a5s_A 225 NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHY----LCDVTWATQERIS 274 (740)
T ss_dssp CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEE----EEEEEEEETTEEE
T ss_pred CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeE----EEEEEEeCCCeEE
Confidence 588899988 732 22332 25555 9999999999854
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.69 E-value=3e-15 Score=143.46 Aligned_cols=164 Identities=12% Similarity=0.112 Sum_probs=109.0
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCC-CcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE-EEEE
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFE-SLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE-VACA 174 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~-~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~-l~s~ 174 (489)
..+..++|+|+|++|++++.+ .|.+|++. +++.... .. ...+ .. +.+++|+|++..+ ++++
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~---------~~---~~~~-g~---~~~~~~spdg~~l~~~~~ 102 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHE---------AS---HPIG-GH---PRANDADTNTRAIFLLAA 102 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEE---------EE---EECC-SS---GGGGCTTSCCEEEEEEEC
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEe---------eE---eecC-CC---CccEEECCCCCEEEEEEe
Confidence 357889999999999999988 99999986 4322110 00 0000 11 3448899998642 3344
Q ss_pred e-------------cCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe-CCCcEEEEE
Q 037120 175 S-------------TRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD-THGVVNIWD 240 (489)
Q Consensus 175 ~-------------~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s-~dg~i~iwd 240 (489)
. .+ |++.+|++.... ........+ ...+...+.+++|+|+|+ ++++++ .++.|++||
T Consensus 103 ~~~~~~~~~~~~~~~~-g~v~v~~~~~~g----~~~~~~~~~---~~~~~~~~~~~~~spdG~-~l~~~~~~~~~v~~~~ 173 (365)
T 1jof_A 103 KQPPYAVYANPFYKFA-GYGNVFSVSETG----KLEKNVQNY---EYQENTGIHGMVFDPTET-YLYSADLTANKLWTHR 173 (365)
T ss_dssp SSTTCCEEEEEESSSC-CEEEEEEECTTC----CEEEEEEEE---ECCTTCCEEEEEECTTSS-EEEEEETTTTEEEEEE
T ss_pred cCCcceeccceeecCC-ceEEEEccCCCC----cCcceEeeE---EeCCCCcceEEEECCCCC-EEEEEcCCCCEEEEEE
Confidence 2 45 999999994211 111111111 012456789999999998 676665 468999999
Q ss_pred CC-CCCcCceeecc--CCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcC
Q 037120 241 RR-VGVLPSLELST--GSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLR 286 (489)
Q Consensus 241 ~~-~~~~~~~~~~~--~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~ 286 (489)
+. +++...+.... .|...+..++|+|+|+++++++. ++.|.+|++.
T Consensus 174 ~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 174 KLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp ECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred ECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEe
Confidence 98 66522222222 24567899999999999988876 7899999876
No 160
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.68 E-value=1.7e-14 Score=136.15 Aligned_cols=263 Identities=10% Similarity=0.060 Sum_probs=168.4
Q ss_pred CceeEEEECCCCcEEEEEecC------------------------CeEEEEeCCCcccccCCCCCCCCCcccccccccCC
Q 037120 97 PGISALDFDCKGIYLVSATRS------------------------GCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHI 152 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~d------------------------g~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~ 152 (489)
..+.+++|+|+|+++++...+ +.|.+||..++...... . ..+.
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~-------~------~~~~ 90 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSS-------G------KNLF 90 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEE-------C------TTTC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEecc-------C------CCcc
Confidence 459999999999999988877 47999998764433210 0 1122
Q ss_pred CCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEec-CCCcEEEEEe
Q 037120 153 PLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSA-VNTSRLIASD 231 (489)
Q Consensus 153 ~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~s 231 (489)
.. ...+++++++. ++++...+ +.|++||..... .....+...... ....++......|+++| ++. ++++.+
T Consensus 91 ~~---p~gia~d~~g~-l~v~d~~~-~~v~~~~~~g~~-~~~~~~~~~~~~-g~~~~~~~~P~~ia~~~~~g~-lyv~d~ 162 (329)
T 3fvz_A 91 YL---PHGLSIDTDGN-YWVTDVAL-HQVFKLDPHSKE-GPLLILGRSMQP-GSDQNHFCQPTDVAVEPSTGA-VFVSDG 162 (329)
T ss_dssp SS---EEEEEECTTSC-EEEEETTT-TEEEEECTTCSS-CCSEEESBTTBC-CCSTTCCSSEEEEEECTTTCC-EEEEEC
T ss_pred CC---ceEEEECCCCC-EEEEECCC-CEEEEEeCCCCe-EEEEEecccCCC-CCCccccCCCcEEEEeCCCCe-EEEEeC
Confidence 22 67799999986 77777766 899999973221 011111100000 00023455789999999 666 778776
Q ss_pred -CCCcEEEEECCCCCcCceeecc----------CCCCceeEEEEeec-CCEEEEEeCCCeEEEEEcCCCcccceeecCCc
Q 037120 232 -THGVVNIWDRRVGVLPSLELST----------GSHGTLNSIQLHAE-NQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKE 299 (489)
Q Consensus 232 -~dg~i~iwd~~~~~~~~~~~~~----------~h~~~v~~~~~~p~-~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~ 299 (489)
.++.|++||. .++ .+..+. ++-.....++++|+ +.++++...++.|++||..+++.+..+.....
T Consensus 163 ~~~~~I~~~~~-~g~--~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~ 239 (329)
T 3fvz_A 163 YCNSRIVQFSP-SGK--FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASF 239 (329)
T ss_dssp SSCCEEEEECT-TSC--EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTT
T ss_pred CCCCeEEEEcC-CCC--EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecccc
Confidence 6999999994 444 333332 12234789999999 55555556699999999998877666643211
Q ss_pred cCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCc
Q 037120 300 VCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNN 379 (489)
Q Consensus 300 ~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (489)
. ..+.+++|+| + .++.. +
T Consensus 240 ~--~~~~~~~~~p-g---------------------------~~~~~--~------------------------------ 257 (329)
T 3fvz_A 240 G--RNVFAISYIP-G---------------------------FLFAV--N------------------------------ 257 (329)
T ss_dssp T--TCEEEEEEET-T---------------------------EEEEE--E------------------------------
T ss_pred C--CCcceeeecC-C---------------------------EEEEe--C------------------------------
Confidence 1 1144444443 1 11100 0
Q ss_pred cccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCC
Q 037120 380 SADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPL 459 (489)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~ 459 (489)
+...++.+.+..|++||..++ +.+..+.. ..++...+.+++++|+
T Consensus 258 ----------------g~~~v~~~~~~~v~~~~~~~g----------~~~~~~~~---------~~~~~~~p~~ia~~~d 302 (329)
T 3fvz_A 258 ----------------GKPYFGDQEPVQGFVMNFSSG----------EIIDVFKP---------VRKHFDMPHDIVASED 302 (329)
T ss_dssp ----------------CCCCTTCSCCCCEEEEETTTC----------CEEEEECC---------SSSCCSSEEEEEECTT
T ss_pred ----------------CCEEeccCCCcEEEEEEcCCC----------eEEEEEcC---------CCCccCCeeEEEECCC
Confidence 122333446778999999888 55554420 0156677899999999
Q ss_pred CCeEEeccCcceeEEEecccc
Q 037120 460 NNTIVAGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 460 ~~~i~sgs~dg~i~v~~~~~~ 480 (489)
+..+++...++.|.+|..+.+
T Consensus 303 G~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 303 GTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp SEEEEEESSSCCEEEEEEEEC
T ss_pred CCEEEEECCCCEEEEEeCCcc
Confidence 999999999999999987654
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.64 E-value=8.9e-15 Score=149.36 Aligned_cols=161 Identities=6% Similarity=0.000 Sum_probs=108.9
Q ss_pred CceeEEEECCCCcEEEEEec---CCeEEEEeCCC--cccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 97 PGISALDFDCKGIYLVSATR---SGCLTVHDFES--LYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~---dg~i~vwd~~~--~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
..|.+++|+|| +++++++. +...+||.+.. ..... .+. .... +...+|+|++..++
T Consensus 65 ~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~--------------~l~-~~~~---~~~~~~s~dg~~~~ 125 (582)
T 3o4h_A 65 NSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ--------------RLE-AVKP---MRILSGVDTGEAVV 125 (582)
T ss_dssp SEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE--------------ECT-TSCS---BEEEEEEECSSCEE
T ss_pred cccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc--------------ccc-CCCC---ceeeeeCCCCCeEE
Confidence 46999999999 78887775 45566765533 11000 000 0111 44578899887766
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCC----CcEEEEECCCCCcC
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTH----GVVNIWDRRVGVLP 247 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~d----g~i~iwd~~~~~~~ 247 (489)
++...+ +.+.+||+..+ .. ... ..+.. .+++|+|||+ .|++++.| +.|++||+.+++
T Consensus 126 ~~s~~~-~~~~l~d~~~g-----~~-~~l-------~~~~~--~~~~~spDG~-~la~~~~~~~~~~~i~~~d~~~g~-- 186 (582)
T 3o4h_A 126 FTGATE-DRVALYALDGG-----GL-REL-------ARLPG--FGFVSDIRGD-LIAGLGFFGGGRVSLFTSNLSSGG-- 186 (582)
T ss_dssp EEEECS-SCEEEEEEETT-----EE-EEE-------EEESS--CEEEEEEETT-EEEEEEEEETTEEEEEEEETTTCC--
T ss_pred EEecCC-CCceEEEccCC-----cE-EEe-------ecCCC--ceEEECCCCC-EEEEEEEcCCCCeEEEEEcCCCCC--
Confidence 655555 45559999432 11 101 11122 7899999999 88877766 789999999876
Q ss_pred ceeeccCCCCceeEEEEeecCCEEEEEeCCC--eEEEEEcCCCcccceeecC
Q 037120 248 SLELSTGSHGTLNSIQLHAENQIIFAAGKHG--SIYLWDLRGGRTSAPFHNH 297 (489)
Q Consensus 248 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg--~i~lwd~~~~~~~~~~~~~ 297 (489)
.. .+..|...+..++|+|||+.|+++..++ .|++||+.+++.. .+..+
T Consensus 187 ~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~ 236 (582)
T 3o4h_A 187 LR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELP 236 (582)
T ss_dssp CE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCS
T ss_pred ce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCC
Confidence 33 4557888899999999999999777788 8999999887654 44433
No 162
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.61 E-value=5.1e-14 Score=133.77 Aligned_cols=200 Identities=11% Similarity=0.112 Sum_probs=120.7
Q ss_pred CCceeEEEECCCCcEEEEEe-cCCeEEEEeCCCc---ccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEE
Q 037120 96 KPGISALDFDCKGIYLVSAT-RSGCLTVHDFESL---YYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEV 171 (489)
Q Consensus 96 ~~~V~~~~fs~~g~~la~g~-~dg~i~vwd~~~~---~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l 171 (489)
...+..++|+|+|++|++++ .++.|.+|++... .........+ . .+. .. .....+.+++|+|++. ++
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~--~-~p~--~~---~~~~~~~~~~~spdg~-l~ 155 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSG--H-GPR--PE---QDGSHIHYTDLTPDNR-LA 155 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCC--C-CSS--TT---CSSCCEEEEEECTTSC-EE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCC--C-CCC--cc---ccCCCceEEEECCCCc-EE
Confidence 44588999999999998888 6899999999631 1111000000 0 000 00 0112278899999998 77
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCC--CCcCce
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRV--GVLPSL 249 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~--~~~~~~ 249 (489)
++...+ +.|.+||+... ..+....... .........++|+|+|+.+++++..++.|.+||+.. ++...+
T Consensus 156 v~~~~~-~~v~~~~~~~~-----g~~~~~~~~~---~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~ 226 (347)
T 3hfq_A 156 VIDLGS-DKVYVYNVSDA-----GQLSEQSVLT---MEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQL 226 (347)
T ss_dssp EEETTT-TEEEEEEECTT-----SCEEEEEEEE---CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEE
T ss_pred EEeCCC-CEEEEEEECCC-----CcEEEeeeEE---cCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEe
Confidence 777666 89999999521 1111111110 112236778999999984444556789999999875 321112
Q ss_pred eeccCCC------CceeEEEEeecCCEEEEEe-CCCeEEEEEcCCC---cccceeecCCccCCCCeeEEEeCCCCcce
Q 037120 250 ELSTGSH------GTLNSIQLHAENQIIFAAG-KHGSIYLWDLRGG---RTSAPFHNHKEVCHLPLTSLKLASMLEKI 317 (489)
Q Consensus 250 ~~~~~h~------~~v~~~~~~p~~~~l~~~~-~dg~i~lwd~~~~---~~~~~~~~~~~~~~~~v~~l~~~~~~~~i 317 (489)
....... ..+..++|+|+|++|++++ .++.|.+||+... +.+..+..+... +..++|+|+|+.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~----~~~~~~spdg~~l 300 (347)
T 3hfq_A 227 GIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDF----PRDFDLDPTEAFV 300 (347)
T ss_dssp EEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSC----CCEEEECTTSSEE
T ss_pred eeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCC----cCeEEECCCCCEE
Confidence 2222111 4588999999999886654 4899999999732 223333333323 4555555555443
No 163
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.61 E-value=1.2e-12 Score=120.70 Aligned_cols=160 Identities=10% Similarity=0.092 Sum_probs=108.0
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEee-CCCCCEEEEEe
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWN-LANQDEVACAS 175 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~-~~~~~~l~s~~ 175 (489)
..+.+++++++|+++++...++.|.+||.+...... ........+|... +..+++. +++ .++++..
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~---------~~~~~~~~~~~~~---p~~i~~~~~~g-~l~v~~~ 96 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQ---------FGECGKRDSQLLY---PNRVAVVRNSG-DIIVTER 96 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEE---------ECCBSSSTTCBSS---EEEEEEETTTT-EEEEEEC
T ss_pred CCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEE---------ecccCCCcccccC---ceEEEEEcCCC-eEEEEcC
Confidence 458899999999999998899999999987422111 0000000112222 7789995 554 4666654
Q ss_pred c-CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeecc-
Q 037120 176 T-RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELST- 253 (489)
Q Consensus 176 ~-d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~- 253 (489)
. + +.|.+||.. + ..+.... ..+...+.++++.+++. ++++...++.|.+||... + .+..+.
T Consensus 97 ~~~-~~i~~~d~~-g-----~~~~~~~------~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g-~--~~~~~~~ 159 (286)
T 1q7f_A 97 SPT-HQIQIYNQY-G-----QFVRKFG------ATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNG-N--VLHKFGC 159 (286)
T ss_dssp GGG-CEEEEECTT-S-----CEEEEEC------TTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTS-C--EEEEEEC
T ss_pred CCC-CEEEEECCC-C-----cEEEEec------CccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCC-C--EEEEeCC
Confidence 3 5 899999952 1 1111111 23445789999999998 888888889999999653 3 232222
Q ss_pred -CCCCceeEEEEeecCCEEEEEeCCCeEEEEEcC
Q 037120 254 -GSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLR 286 (489)
Q Consensus 254 -~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~ 286 (489)
.+...+..++++|+|+++++...++.|++||..
T Consensus 160 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 193 (286)
T 1q7f_A 160 SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE 193 (286)
T ss_dssp TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT
T ss_pred CCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC
Confidence 344568999999999877766779999999974
No 164
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.59 E-value=1.3e-13 Score=130.06 Aligned_cols=130 Identities=12% Similarity=0.022 Sum_probs=91.0
Q ss_pred EEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCccc-CeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCc
Q 037120 170 EVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQK-GLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPS 248 (489)
Q Consensus 170 ~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 248 (489)
++++++.+ +.|.+||+... +.+.... .++.. .+..++|+|+++.++++++.++.|.+||+.+++ .
T Consensus 3 ~~v~~~~~-~~v~~~d~~~~-----~~~~~~~------~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--~ 68 (337)
T 1pby_B 3 YILAPARP-DKLVVIDTEKM-----AVDKVIT------IADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE--T 68 (337)
T ss_dssp EEEEEETT-TEEEEEETTTT-----EEEEEEE------CTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC--E
T ss_pred EEEEcCCC-CeEEEEECCCC-----cEEEEEE------cCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC--e
Confidence 67777777 99999999432 2222211 22222 378899999998455667778999999998876 3
Q ss_pred eeecc-CC----CCceeEEEEeecCCEEEEEe------------CCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeC
Q 037120 249 LELST-GS----HGTLNSIQLHAENQIIFAAG------------KHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLA 311 (489)
Q Consensus 249 ~~~~~-~h----~~~v~~~~~~p~~~~l~~~~------------~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~ 311 (489)
+..+. .+ ...+.+++|+|+|+++++++ .++.|.+||+.+++.+..+.. ... +.+++|+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~----~~~~~~s 143 (337)
T 1pby_B 69 LGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQ----ITMLAWA 143 (337)
T ss_dssp EEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSS----CCCEEEC
T ss_pred EeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCC----cceeEEC
Confidence 33222 22 22677899999999998886 579999999998877666654 223 6677788
Q ss_pred CCCccee
Q 037120 312 SMLEKIG 318 (489)
Q Consensus 312 ~~~~~i~ 318 (489)
|+++.+.
T Consensus 144 ~dg~~l~ 150 (337)
T 1pby_B 144 RDGSKLY 150 (337)
T ss_dssp TTSSCEE
T ss_pred CCCCEEE
Confidence 8777554
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.58 E-value=5.5e-13 Score=138.25 Aligned_cols=200 Identities=7% Similarity=-0.071 Sum_probs=120.5
Q ss_pred ccCCCceeEEEECCCCcEEEEE--ecCCeEEEEeCCCcccccCCCCCCCCCcccccc---cccCCCCCCceeEEEee--C
Q 037120 93 SFGKPGISALDFDCKGIYLVSA--TRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSK---HLLHIPLPQQLDAVRWN--L 165 (489)
Q Consensus 93 ~~~~~~V~~~~fs~~g~~la~g--~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~---~~~h~~~~~~V~~v~~~--~ 165 (489)
..+...|..++|++++.+++.. +.++...||.......... +..+.. ...|...+. ...|+ |
T Consensus 20 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--------l~~~~~~~~~~~~~~~~~---~~~~~~SP 88 (662)
T 3azo_A 20 ASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEES--------ALPAPWNVRNRVFEYSGF---PWAGVPRP 88 (662)
T ss_dssp HHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEE--------SSCTTCCBCCCGGGTCCC---CEEEECCS
T ss_pred hhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcce--------eCCCCccccccccccCCc---cceeeeec
Confidence 3355679999999988777877 5688999998633111110 111000 011111111 36666 9
Q ss_pred CCCCEEEEEecCCCEEEEEEeccCC-CCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCC----------C
Q 037120 166 ANQDEVACASTRSNVVSIYDIGYIS-DEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTH----------G 234 (489)
Q Consensus 166 ~~~~~l~s~~~d~g~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~d----------g 234 (489)
+++.+|+.++..+..|.+|++.... ... ..+.... ...|...+.+++|+|||+ .|++++.| .
T Consensus 89 Dg~~~la~~~~~~~~l~~~~~~~~g~~~~-~~l~~~~-----~~~~~~~~~~~~~spDg~-~l~~~~~~~~~~~~~~~~~ 161 (662)
T 3azo_A 89 AGGPLLVFTHFGDQRLYAFEPDAPGGAVP-RPLTPVS-----AVGGGLRWADPVLLPERG-EVWCMAEEFTGEGPSDVRR 161 (662)
T ss_dssp SSSCEEEEEBTTTCCEEEECTTSTTCCCC-EECSCCC-----CSTTCEEEEEEEEETTTT-EEEEEEEEECSSSTTCEEE
T ss_pred CCCeEEEEEECCCCeEEEEcCCCCCCCCC-EeccCCc-----cCCCCccccCcEECCCCC-EEEEEEecccCCCCCCcee
Confidence 9876244444222566666552001 111 1111100 011566789999999999 88888766 5
Q ss_pred cEEEEECCC------CCcCceeecc-CCCCceeEEEEeecCCEEEEEeCC--------CeEEEEEcC-CC---cccceee
Q 037120 235 VVNIWDRRV------GVLPSLELST-GSHGTLNSIQLHAENQIIFAAGKH--------GSIYLWDLR-GG---RTSAPFH 295 (489)
Q Consensus 235 ~i~iwd~~~------~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~~~~~d--------g~i~lwd~~-~~---~~~~~~~ 295 (489)
.|++||+.+ ++ .. .+. .+...+..++|+|||++|+.++.+ ..|++||+. ++ +......
T Consensus 162 ~i~~~~~~~~~~~~~~~--~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 162 FLAAVPLDGSAAADRSA--VR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp EEEEEETTSTTTTCGGG--SE-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred EEEEEECCCCccccCCc--ee-EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 899999987 43 22 333 455678889999999999888754 489999999 56 3222333
Q ss_pred cCCccCCCCeeEEEeCCCCcce
Q 037120 296 NHKEVCHLPLTSLKLASMLEKI 317 (489)
Q Consensus 296 ~~~~~~~~~v~~l~~~~~~~~i 317 (489)
.+... +..+.|+|||+.+
T Consensus 239 ~~~~~----~~~~~~spdg~l~ 256 (662)
T 3azo_A 239 GPEEA----IAQAEWAPDGSLI 256 (662)
T ss_dssp ETTBC----EEEEEECTTSCEE
T ss_pred CCCce----EcceEECCCCeEE
Confidence 34445 7778888877733
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.57 E-value=1.2e-13 Score=145.13 Aligned_cols=146 Identities=9% Similarity=0.092 Sum_probs=96.5
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCC----
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTH---- 233 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~d---- 233 (489)
..+++|+|+++ +++++ | ++|++||+..+... ..+. ... +..+.....+++|+|||+ .|+.++.+
T Consensus 19 ~~~~~w~~dg~-~~~~~--~-~~i~~~~~~~~~~~--~~~~-~~~----~~~~~~~~~~~~~Spdg~-~l~~~~~~~~~~ 86 (740)
T 4a5s_A 19 LYSLRWISDHE-YLYKQ--E-NNILVFNAEYGNSS--VFLE-NST----FDEFGHSINDYSISPDGQ-FILLEYNYVKQW 86 (740)
T ss_dssp CCCEEECSSSE-EEEEE--T-TEEEEEETTTCCEE--EEEC-TTT----TTTCCSCCCEEEECTTSS-EEEEEEEEEECS
T ss_pred ccccEECCCCc-EEEEc--C-CcEEEEECCCCceE--EEEe-chh----hhhhcccccceEECCCCC-EEEEEECCeeeE
Confidence 44599999985 55554 6 99999999544211 1111 000 011222345689999999 88888865
Q ss_pred -----CcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccc-eeecCCccC------
Q 037120 234 -----GVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSA-PFHNHKEVC------ 301 (489)
Q Consensus 234 -----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~-~~~~~~~~~------ 301 (489)
+.+.+||+.+++ +. .+..|...+...+|+|||+.|+.+ .|+.|++||+.+++... +..++....
T Consensus 87 r~~~~~~~~~~d~~~~~--~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~ 162 (740)
T 4a5s_A 87 RHSYTASYDIYDLNKRQ--LI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITD 162 (740)
T ss_dssp SSCEEEEEEEEETTTTE--EC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCC
T ss_pred EEccceEEEEEECCCCc--EE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCccc
Confidence 567799999876 33 345667789999999999998877 57899999998876532 122222110
Q ss_pred -------CCCeeEEEeCCCCcceee
Q 037120 302 -------HLPLTSLKLASMLEKIGT 319 (489)
Q Consensus 302 -------~~~v~~l~~~~~~~~i~~ 319 (489)
.....++.|+|||+.|+.
T Consensus 163 ~v~~ee~~~~~~~~~wSpDg~~la~ 187 (740)
T 4a5s_A 163 WVYEEEVFSAYSALWWSPNGTFLAY 187 (740)
T ss_dssp HHHHHHTSSSSBCEEECTTSSEEEE
T ss_pred ccccchhcCCCcceEECCCCCEEEE
Confidence 001235889999988865
No 167
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.51 E-value=1.4e-11 Score=112.39 Aligned_cols=156 Identities=11% Similarity=-0.011 Sum_probs=103.0
Q ss_pred ceeEEEECCCCcEEE-EEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 98 GISALDFDCKGIYLV-SATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 98 ~V~~~~fs~~g~~la-~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
...+++++++|++++ +.+.++.|.+||..+...... . ..+... +.++++.+++. ++++..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~--------~------~~~~~~---p~~i~~~~~g~-l~v~~~- 85 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL--------P------FNGLYQ---PQGLAVDGAGT-VYVTDF- 85 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EEC--------C------CCSCCS---CCCEEECTTCC-EEEEET-
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceE--------e------eCCcCC---cceeEECCCCC-EEEEcC-
Confidence 578899999999777 557789999998765322110 0 011122 56699999875 666666
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCC
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSH 256 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~ 256 (489)
+ +.|.+||..... ..... ......+..+++.+++. ++++...++.|.+||..+.. .........
T Consensus 86 ~-~~i~~~d~~~~~------~~~~~------~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~--~~~~~~~~~ 149 (270)
T 1rwi_B 86 N-NRVVTLAAGSNN------QTVLP------FDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKT--QTVLPFTGL 149 (270)
T ss_dssp T-TEEEEECTTCSC------CEECC------CCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCS--CEECCCCSC
T ss_pred C-CEEEEEeCCCce------Eeeee------cCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCce--eEeeccccC
Confidence 5 899999973221 11000 12224688999999988 88877778999999866543 221122223
Q ss_pred CceeEEEEeecCCEEEEEeCCCeEEEEEcCCC
Q 037120 257 GTLNSIQLHAENQIIFAAGKHGSIYLWDLRGG 288 (489)
Q Consensus 257 ~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~ 288 (489)
..+..++++|+|++.++...++.|.+||....
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 181 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN 181 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCC
Confidence 46788999999986666666889999998754
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.50 E-value=4.2e-13 Score=129.66 Aligned_cols=182 Identities=8% Similarity=-0.086 Sum_probs=108.4
Q ss_pred eeEEEECCCCcEEEEEecC---CeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEe
Q 037120 99 ISALDFDCKGIYLVSATRS---GCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAS 175 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~d---g~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~ 175 (489)
+.+++|+|||++||..... ..|.+||+.+.+..... ..+... ...+.|+|+++ .|+.++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~--------------~~~~~~---~~~~~~spdg~-~l~~~~ 99 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLT--------------EGKGDN---TFGGFISTDER-AFFYVK 99 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECC--------------CSSCBC---TTTCEECTTSS-EEEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEee--------------cCCCCc---cccceECCCCC-EEEEEE
Confidence 6778999999998877653 36888888774432210 011111 22378999997 555555
Q ss_pred cCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeE-------------------EEEecCCCcEEEEE-----e
Q 037120 176 TRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSD-------------------LAFSAVNTSRLIAS-----D 231 (489)
Q Consensus 176 ~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~-------------------~~~~~~~~~~l~s~-----s 231 (489)
.+ +.|.+||+..+. ...+.. .+...... +.|+|+++ .++.. .
T Consensus 100 ~~-~~l~~~d~~~~~--~~~~~~----------~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~~~~ 165 (396)
T 3c5m_A 100 NE-LNLMKVDLETLE--EQVIYT----------VDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTS-WEKFAEFYHTN 165 (396)
T ss_dssp TT-TEEEEEETTTCC--EEEEEE----------CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS-HHHHHHHHHTC
T ss_pred cC-CcEEEEECCCCC--cEEEEe----------cccccCCCCCEEEeccCCccccccccccccCCCCc-ceeeeeeccCC
Confidence 55 799999984331 111111 01111111 34677777 44433 4
Q ss_pred CCCcEEEEECCCCCcCceeeccCCCCceeEEEEee-cCCEEEEEeCC------CeEEEEEcCCCcccceeecCCccCCCC
Q 037120 232 THGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHA-ENQIIFAAGKH------GSIYLWDLRGGRTSAPFHNHKEVCHLP 304 (489)
Q Consensus 232 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~~~~~d------g~i~lwd~~~~~~~~~~~~~~~~~~~~ 304 (489)
.+..|++||+.+++. .. ...+...+..+.|+| ++..++..+.+ ..|.+||+.+++. ..+..+... ..
T Consensus 166 ~~~~l~~~d~~~g~~--~~-~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~--~~ 239 (396)
T 3c5m_A 166 PTCRLIKVDIETGEL--EV-IHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEG--ES 239 (396)
T ss_dssp CCEEEEEEETTTCCE--EE-EEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTT--EE
T ss_pred CcceEEEEECCCCcE--Ee-eccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCC--cc
Confidence 567899999988762 22 224567789999999 78877666542 4688899876543 222222100 11
Q ss_pred eeEEEeCCCCccee
Q 037120 305 LTSLKLASMLEKIG 318 (489)
Q Consensus 305 v~~l~~~~~~~~i~ 318 (489)
+..+.|+|+|+.++
T Consensus 240 ~~~~~~spdg~~l~ 253 (396)
T 3c5m_A 240 CTHEFWIPDGSAMA 253 (396)
T ss_dssp EEEEEECTTSSCEE
T ss_pred ccceEECCCCCEEE
Confidence 66677777776654
No 169
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.50 E-value=1.4e-12 Score=123.66 Aligned_cols=122 Identities=7% Similarity=-0.039 Sum_probs=76.6
Q ss_pred ceeEEEECCCCcEEE-EEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 98 GISALDFDCKGIYLV-SATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 98 ~V~~~~fs~~g~~la-~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
.+..++|+|+|++++ ++..++.|.+||+.+.+..... ..... ...+... +.+++|+|+++.++++...
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~-------~~~~~-~~~~~~~---~~~~~~spdg~~l~~~~~~ 112 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA-------NLSSV-PGEVGRS---MYSFAISPDGKEVYATVNP 112 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-------ESCCS-TTEEEEC---SSCEEECTTSSEEEEEEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE-------Ecccc-ccccccc---ccceEECCCCCEEEEEccc
Confidence 477899999998664 5556899999999875443210 00000 0000111 5669999999755555542
Q ss_pred -----------CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCC
Q 037120 177 -----------RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGV 245 (489)
Q Consensus 177 -----------d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~ 245 (489)
+ +.|.+||+.... .......+ . +...+.+++|+|+++ +++ ++ +.|.+||+.+++
T Consensus 113 ~~~~~~~~~~~~-~~i~~~d~~~~~-----~~~~~~~~----~-~~~~~~~~~~s~dg~-l~~-~~--~~i~~~d~~~~~ 177 (349)
T 1jmx_B 113 TQRLNDHYVVKP-PRLEVFSTADGL-----EAKPVRTF----P-MPRQVYLMRAADDGS-LYV-AG--PDIYKMDVKTGK 177 (349)
T ss_dssp EEECSSCEEECC-CEEEEEEGGGGG-----GBCCSEEE----E-CCSSCCCEEECTTSC-EEE-ES--SSEEEECTTTCC
T ss_pred ccccccccccCC-CeEEEEECCCcc-----ccceeeec----c-CCCcccceeECCCCc-EEE-cc--CcEEEEeCCCCc
Confidence 3 899999995421 11111111 1 233688999999998 555 43 349999998876
No 170
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.49 E-value=1.1e-11 Score=129.60 Aligned_cols=161 Identities=11% Similarity=0.059 Sum_probs=106.1
Q ss_pred ceeEEEECCCCcEEEEEecCC-----eEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEE
Q 037120 98 GISALDFDCKGIYLVSATRSG-----CLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVA 172 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~dg-----~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~ 172 (489)
.+..++|||||++||.+..++ .|+|||+.+++.... . ..+ .. +..++|+|+++.+++
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~--------~------~~~-~~---~~~~~wspDg~~l~~ 187 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD--------V------LER-VK---FSCMAWTHDGKGMFY 187 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE--------E------EEE-EC---SCCEEECTTSSEEEE
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc--------c------ccC-cc---cceEEEEeCCCEEEE
Confidence 488999999999999877644 899999998554331 0 001 11 455999999975555
Q ss_pred EEecCCCE----------------EEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeC----
Q 037120 173 CASTRSNV----------------VSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDT---- 232 (489)
Q Consensus 173 s~~~d~g~----------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~---- 232 (489)
+.. + +. |++|++....... . .+.....|...+..+.|+|+|+ .|+.++.
T Consensus 188 ~~~-~-~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~--~------~v~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~ 256 (710)
T 2xdw_A 188 NAY-P-QQDGKSDGTETSTNLHQKLYYHVLGTDQSED--I------LCAEFPDEPKWMGGAELSDDGR-YVLLSIREGCD 256 (710)
T ss_dssp EEC-C-CCSSCCSSSCCCCCCCCEEEEEETTSCGGGC--E------EEECCTTCTTCEEEEEECTTSC-EEEEEEECSSS
T ss_pred EEE-C-CccccccccccccCCCCEEEEEECCCCcccc--e------EEeccCCCCeEEEEEEEcCCCC-EEEEEEEccCC
Confidence 544 3 33 9999994432111 1 1111233556688999999999 6665553
Q ss_pred -CCcEEEEECCC------CCcCceeeccCCCCceeEEEEeecCCEEEEEeC----CCeEEEEEcCCCc
Q 037120 233 -HGVVNIWDRRV------GVLPSLELSTGSHGTLNSIQLHAENQIIFAAGK----HGSIYLWDLRGGR 289 (489)
Q Consensus 233 -dg~i~iwd~~~------~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~----dg~i~lwd~~~~~ 289 (489)
+..|++||+.+ +... .+.+..+...+.. .|+|+|..++..+. .+.|.+||+.++.
T Consensus 257 ~~~~l~~~d~~~~~~~~~~~~~-~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 257 PVNRLWYCDLQQESNGITGILK-WVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPE 322 (710)
T ss_dssp SCCEEEEEEGGGSSSSSCSSCC-CEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred CccEEEEEECcccccccCCccc-eEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 57899999986 4211 2234455555554 58899998877765 3369999988753
No 171
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.47 E-value=8.4e-12 Score=115.59 Aligned_cols=156 Identities=8% Similarity=-0.018 Sum_probs=104.8
Q ss_pred CceeEEEECCCCc-EEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEe
Q 037120 97 PGISALDFDCKGI-YLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAS 175 (489)
Q Consensus 97 ~~V~~~~fs~~g~-~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~ 175 (489)
....+++|+|+|+ +++++..++.|.+||..+. ... + ..+... +.+++|++++. ++++..
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~---------~------~~~~~~---~~~l~~~~dg~-l~v~~~ 87 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSP---------E------MHPSHH---QNGHCLNKQGH-LIACSH 87 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEE---------E------ESSCSS---EEEEEECTTCC-EEEEET
T ss_pred ccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEE---------E------ECCCCC---cceeeECCCCc-EEEEec
Confidence 3467899999998 7888889999999999874 111 1 112222 78899999986 666666
Q ss_pred cCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeC-----------------CCcEEE
Q 037120 176 TRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDT-----------------HGVVNI 238 (489)
Q Consensus 176 ~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~-----------------dg~i~i 238 (489)
.+ +.|.+||...+.. ..+... . .......++++++.|+|. ++++.+. .+.|..
T Consensus 88 ~~-~~i~~~d~~~g~~---~~~~~~--~---~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~ 157 (296)
T 3e5z_A 88 GL-RRLERQREPGGEW---ESIADS--F---EGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFR 157 (296)
T ss_dssp TT-TEEEEECSTTCCE---EEEECE--E---TTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEE
T ss_pred CC-CeEEEEcCCCCcE---EEEeec--c---CCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEE
Confidence 55 8999999843311 111100 0 011223577899999998 7776321 345666
Q ss_pred EECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcC
Q 037120 239 WDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLR 286 (489)
Q Consensus 239 wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~ 286 (489)
+|.. ++ +.....+....+.++|+|+++.+++.+.++.|++||+.
T Consensus 158 ~~~~-g~---~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 158 LAPD-GT---LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp ECTT-SC---EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred ECCC-CC---EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEEC
Confidence 6654 33 22334555677899999999998666668999999987
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.44 E-value=7.1e-12 Score=129.90 Aligned_cols=164 Identities=11% Similarity=-0.027 Sum_probs=101.1
Q ss_pred EEEEC--CCCcE-EEEEec-CCeEEEEeCC--C-cccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEE
Q 037120 101 ALDFD--CKGIY-LVSATR-SGCLTVHDFE--S-LYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVAC 173 (489)
Q Consensus 101 ~~~fs--~~g~~-la~g~~-dg~i~vwd~~--~-~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s 173 (489)
...|+ |||+. ||.++. +..|.++++. . ..... +.... ...|... +.+++|+|+++.++++
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~---------l~~~~-~~~~~~~---~~~~~~spDg~~l~~~ 147 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRP---------LTPVS-AVGGGLR---WADPVLLPERGEVWCM 147 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEE---------CSCCC-CSTTCEE---EEEEEEETTTTEEEEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEe---------ccCCc-cCCCCcc---ccCcEECCCCCEEEEE
Confidence 44454 99998 776654 5566666665 1 22111 11100 0002222 7889999999755544
Q ss_pred EecCC---------CEEEEEEeccCC----CCCceeeeeceeeeeecC-CcccCeeEEEEecCCCcEEEEEeCC------
Q 037120 174 ASTRS---------NVVSIYDIGYIS----DEPVEVLKTRRSVTVVGS-DVQKGLSDLAFSAVNTSRLIASDTH------ 233 (489)
Q Consensus 174 ~~~d~---------g~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~s~d------ 233 (489)
.. +. ..|.+||+.... ... .. +. .+...+..++|+|||+ .|+.++.+
T Consensus 148 ~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------~~----l~~~~~~~~~~~~~SpDG~-~la~~~~~~~~~~~ 214 (662)
T 3azo_A 148 AE-EFTGEGPSDVRRFLAAVPLDGSAAADRSAV-------RE----LSDDAHRFVTGPRLSPDGR-QAVWLAWDHPRMPW 214 (662)
T ss_dssp EE-EECSSSTTCEEEEEEEEETTSTTTTCGGGS-------EE----SSCSCSSEECCCEECTTSS-EEEEEEECTTCCTT
T ss_pred Ee-cccCCCCCCceeEEEEEECCCCccccCCce-------eE----EEecCCCcccCceECCCCC-EEEEEECCCCCCCC
Confidence 43 20 478999984310 111 11 13 3445788899999999 77777644
Q ss_pred --CcEEEEECC-CCCc-CceeeccCCCCceeEEEEeecCCEEEEEeCCC--eEEEEEcCCCcc
Q 037120 234 --GVVNIWDRR-VGVL-PSLELSTGSHGTLNSIQLHAENQIIFAAGKHG--SIYLWDLRGGRT 290 (489)
Q Consensus 234 --g~i~iwd~~-~~~~-~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg--~i~lwd~~~~~~ 290 (489)
..|++||+. ++.. ........|...+..++|+|+|++++++..++ .|.+||+.+++.
T Consensus 215 ~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~ 277 (662)
T 3azo_A 215 EGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAA 277 (662)
T ss_dssp TCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCE
T ss_pred CCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCce
Confidence 379999998 4521 13333345578899999999999777776688 677777766654
No 173
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.43 E-value=1e-11 Score=129.28 Aligned_cols=159 Identities=11% Similarity=0.055 Sum_probs=100.3
Q ss_pred ceeEEEECCCCcEEE-----EEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEE
Q 037120 98 GISALDFDCKGIYLV-----SATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVA 172 (489)
Q Consensus 98 ~V~~~~fs~~g~~la-----~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~ 172 (489)
.+.+++|||||++|| .|+.+..|++||+.+++.... . +.... ....++|+|+++ .|+
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~----------~------~~~~~-~~~~~~wspDg~-~l~ 183 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV----------D------VIEGG-KYATPKWTPDSK-GFY 183 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS----------C------CBSCC-TTCCCEECTTSS-EEE
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC----------c------ccCcc-cccceEEecCCC-EEE
Confidence 488999999999999 444457899999998544310 0 00010 014589999997 455
Q ss_pred EEecCCCE-------------EEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCC----c
Q 037120 173 CASTRSNV-------------VSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHG----V 235 (489)
Q Consensus 173 s~~~d~g~-------------i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg----~ 235 (489)
.++.| .. |++|++....... ..+....+|...+..+.|+|+|+ .|+.++.++ .
T Consensus 184 ~~~~d-~~~~~~~~~~~~~~~v~~~~l~t~~~~~--------~lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~ 253 (695)
T 2bkl_A 184 YEWLP-TDPSIKVDERPGYTTIRYHTLGTEPSKD--------TVVHERTGDPTTFLQSDLSRDGK-YLFVYILRGWSEND 253 (695)
T ss_dssp EEECC-CCTTSCGGGGGGGCEEEEEETTSCGGGC--------EEEECCCCCTTCEEEEEECTTSC-CEEEEEEETTTEEE
T ss_pred EEEec-CCCCCccccCCCCCEEEEEECCCCchhc--------eEEEecCCCCEEEEEEEECCCCC-EEEEEEeCCCCceE
Confidence 55544 44 9999995432211 11122244666889999999999 666555454 6
Q ss_pred EEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeC----CCeEEEEEcCCCc
Q 037120 236 VNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGK----HGSIYLWDLRGGR 289 (489)
Q Consensus 236 i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~----dg~i~lwd~~~~~ 289 (489)
|++||..+++ .. .+..+...+....+ ++|. ++..+. ++.|.+||+.+++
T Consensus 254 l~~~~~~~~~--~~-~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 254 VYWKRPGEKD--FR-LLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp EEEECTTCSS--CE-EEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCS
T ss_pred EEEEcCCCCc--eE-EeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCC
Confidence 7777665443 22 33344555666666 6666 555443 5889999987654
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.43 E-value=1.7e-11 Score=115.54 Aligned_cols=180 Identities=9% Similarity=0.024 Sum_probs=116.2
Q ss_pred ceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecC
Q 037120 98 GISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTR 177 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d 177 (489)
.|.+++|++++..++..+.++.+++|.-.. .. .+. .+... +.+++|++++. +++++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------~~~------~~~~~---~~~~~~~~~g~-l~~~~~~~ 65 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTITAEP---WL--------EIS------KKGLQ---LEGLNFDRQGQ-LFLLDVFE 65 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEEECEE---EE--------EEE------SSCCC---EEEEEECTTSC-EEEEETTT
T ss_pred ccceeeecCCccceeEEeecccCcccccce---eE--------EEe------ccCcc---ccCcEECCCCC-EEEEECCC
Confidence 477888999988888778888899993221 11 011 11122 77899999886 77777766
Q ss_pred CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCC----CcEEEEECCCCCcCceeecc
Q 037120 178 SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTH----GVVNIWDRRVGVLPSLELST 253 (489)
Q Consensus 178 ~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~ 253 (489)
+.|.+||..... . . .+. ..+...+.+++|++++. ++++...+ +.|.+||..++....+....
T Consensus 66 -~~i~~~d~~~~~-----~-~---~~~---~~~~~~~~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~ 131 (333)
T 2dg1_A 66 -GNIFKINPETKE-----I-K---RPF---VSHKANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATENGDNLQDIIEDL 131 (333)
T ss_dssp -CEEEEECTTTCC-----E-E---EEE---ECSSSSEEEEEECTTSC-EEEEECTTSSSCCEEEEECTTSCSCEEEECSS
T ss_pred -CEEEEEeCCCCc-----E-E---EEe---eCCCCCcceEEECCCCc-EEEEeCCCCCCCceEEEEeCCCCEEEEEEccC
Confidence 899999984221 1 1 010 12446799999999998 77777666 68999998876522111111
Q ss_pred CCCCceeEEEEeecCCEEEEEeC------CCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcce
Q 037120 254 GSHGTLNSIQLHAENQIIFAAGK------HGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKI 317 (489)
Q Consensus 254 ~h~~~v~~~~~~p~~~~l~~~~~------dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i 317 (489)
.+...+..++++|+|+++++... .+.|..||..+++. ..+...... +..++|+|+++.+
T Consensus 132 ~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~----~~~i~~~~dg~~l 196 (333)
T 2dg1_A 132 STAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-TPIIQNISV----ANGIALSTDEKVL 196 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE-EEEEEEESS----EEEEEECTTSSEE
T ss_pred ccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEE-EEeecCCCc----ccceEECCCCCEE
Confidence 23467899999999987776653 35677777665443 222222223 6778888887644
No 175
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.42 E-value=1.7e-11 Score=116.91 Aligned_cols=161 Identities=12% Similarity=0.093 Sum_probs=100.4
Q ss_pred EEEECCCCcEEEEEe----------cCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 101 ALDFDCKGIYLVSAT----------RSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 101 ~~~fs~~g~~la~g~----------~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
.++|+|||++|.+++ .++.|.+||..+.+.... .........+... ...++|+|+++.+
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~--------i~~~~~~~~~g~~---p~~i~~spdg~~l 122 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKE--------ISLPPKRVQGLNY---DGLFRQTTDGKFI 122 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEE--------EEECTTBCCBCCC---GGGEEECTTSSEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEE--------EEcCccccccCCC---cceEEECCCCCEE
Confidence 889999999998886 367899999987544431 1000000001112 4459999999855
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeee-ceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCce
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKT-RRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSL 249 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 249 (489)
+++....+++|.+||+... +.+.. ... .....+.+.|++...+++.+.||.+.+|++..... ..
T Consensus 123 ~v~n~~~~~~v~v~d~~~~-----~~~~~~i~~---------~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~-~~ 187 (361)
T 2oiz_A 123 VLQNASPATSIGIVDVAKG-----DYVEDVTAA---------AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGK-VA 187 (361)
T ss_dssp EEEEESSSEEEEEEETTTT-----EEEEEEGGG---------TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSS-EE
T ss_pred EEECCCCCCeEEEEECCCC-----cEEEEEecC---------CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCc-Ee
Confidence 5554431389999999432 33322 211 12233567888755888999999999999875321 11
Q ss_pred ------eeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCC
Q 037120 250 ------ELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGG 288 (489)
Q Consensus 250 ------~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~ 288 (489)
..+..+..++ .+.+.|++..++..+.++.|.++|+...
T Consensus 188 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~ 231 (361)
T 2oiz_A 188 SQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGD 231 (361)
T ss_dssp EEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSS
T ss_pred eeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCC
Confidence 1112222222 3344678888888888999999998754
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.41 E-value=2.4e-11 Score=115.11 Aligned_cols=136 Identities=10% Similarity=0.102 Sum_probs=86.4
Q ss_pred ceeEEEECCCCcEEEEEe---------cCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCC
Q 037120 98 GISALDFDCKGIYLVSAT---------RSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQ 168 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~---------~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~ 168 (489)
.+...++ ||+.+|... .++.|.+||+.+..... + .. +..++|+|+++
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~---------l----------~~---~~~~~~SpDg~ 71 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF---------I----------EN---ATMPRISPDGK 71 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE---------E----------ES---CEEEEECTTSS
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE---------c----------cc---CCCeEECCCCC
Confidence 4677778 888887653 26678999988733211 1 11 77899999997
Q ss_pred CEEEEEecC-CC--EEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeC-------------
Q 037120 169 DEVACASTR-SN--VVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDT------------- 232 (489)
Q Consensus 169 ~~l~s~~~d-~g--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~------------- 232 (489)
.++++...+ ++ .|.+||+..+ .... . ..+.. +..++|+|+++ .|+.++.
T Consensus 72 ~la~~~~~~~~~~~~l~~~~~~~g-----~~~~----l----~~~~~-~~~~~wspdg~-~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 72 KIAFMRANEEKKVSEIWVADLETL-----SSKK----I----LEAKN-IRSLEWNEDSR-KLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTT-----EEEE----E----EEESE-EEEEEECTTSS-EEEEEEECCCC---------
T ss_pred EEEEEEeccCCCcceEEEEECCCC-----ceEE----E----EcCCC-ccceeECCCCC-EEEEEEccCCCcCCcEEEcc
Confidence 555444321 03 4667776321 1111 1 11223 88999999999 6766653
Q ss_pred --------------CCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCC
Q 037120 233 --------------HGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKH 277 (489)
Q Consensus 233 --------------dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d 277 (489)
...|++||+.+++ .++.+.. . .+..++|+|+| +++++..+
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~--~~~~l~~-~-~~~~~~~spdg-~~~~~~~~ 190 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEE--VIEEFEK-P-RFSSGIWHRDK-IVVNVPHR 190 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTE--EEEEEEE-E-TTCEEEEETTE-EEEEEECC
T ss_pred cceeecCcccccCccceEEEEECCCCe--EEeeecC-C-CcccccCCCCe-EEEEEecc
Confidence 2579999998876 3122222 3 78899999999 77777553
No 177
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.40 E-value=4.6e-11 Score=115.03 Aligned_cols=156 Identities=8% Similarity=-0.077 Sum_probs=101.3
Q ss_pred eeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEE--eeCCCCCEEEEE--
Q 037120 99 ISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVR--WNLANQDEVACA-- 174 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~--~~~~~~~~l~s~-- 174 (489)
+..++|+|||+.|+.++.++.|++||+.+.+.... . ..+... +.... ++|++. +++..
T Consensus 83 ~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~--------~------~~~~~~---~~~~~~~~~~dg~-~l~~~~~ 144 (388)
T 3pe7_A 83 TFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVV--------Y------QVPAEW---VGYGTWVANSDCT-KLVGIEI 144 (388)
T ss_dssp SSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEE--------E------ECCTTE---EEEEEEEECTTSS-EEEEEEE
T ss_pred ccceEEcCCCCEEEEEeCCCeEEEEECCCCcceee--------e------echhhc---ccccceeECCCCC-eeccccc
Confidence 44678999999999999999999999988543321 0 111111 33333 478876 44422
Q ss_pred --------------------ecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEec-CCCcEEEEEeCC
Q 037120 175 --------------------STRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSA-VNTSRLIASDTH 233 (489)
Q Consensus 175 --------------------~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~s~d 233 (489)
..+ ..|.+||+..+ +. .. . ..+...+..++|+| ++. .|+.+..+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~d~~~g--~~-~~------l----~~~~~~~~~~~~sp~dg~-~l~~~~~~ 209 (388)
T 3pe7_A 145 RREDWVPLTDWKKFHEFYFTKPC-CRLMRVDLKTG--ES-TV------I----LQENQWLGHPIYRPYDDS-TVAFCHEG 209 (388)
T ss_dssp EGGGCCCCCSHHHHHHHGGGCCC-EEEEEEETTTC--CE-EE------E----EEESSCEEEEEEETTEEE-EEEEEECS
T ss_pred cCcccccccccchhhhhhccCCc-ceEEEEECCCC--ce-EE------e----ecCCccccccEECCCCCC-EEEEEEec
Confidence 122 68999998433 11 11 1 22445788999999 998 77766643
Q ss_pred ------CcEEEEECCCCCcCceeeccCCC--CceeEEEEeecCCEEEEEeC-CC----eEEEEEcCCCcc
Q 037120 234 ------GVVNIWDRRVGVLPSLELSTGSH--GTLNSIQLHAENQIIFAAGK-HG----SIYLWDLRGGRT 290 (489)
Q Consensus 234 ------g~i~iwd~~~~~~~~~~~~~~h~--~~v~~~~~~p~~~~l~~~~~-dg----~i~lwd~~~~~~ 290 (489)
..|.++|...++ .. .+..+. ..+..++|+|+|+.|+..+. ++ .|++||+.+++.
T Consensus 210 ~~~~~~~~l~~~d~~~~~--~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 210 PHDLVDARMWLINEDGTN--MR-KVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN 276 (388)
T ss_dssp CTTTSSCSEEEEETTSCC--CE-ESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE
T ss_pred CCCCCcceEEEEeCCCCc--eE-EeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce
Confidence 378888887654 22 222333 35778999999998766544 22 499999998864
No 178
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.36 E-value=6.4e-09 Score=95.84 Aligned_cols=185 Identities=7% Similarity=-0.036 Sum_probs=120.4
Q ss_pred CCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEE
Q 037120 95 GKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACA 174 (489)
Q Consensus 95 ~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~ 174 (489)
....+.+++++++|+++++...++.|.+||.. ....... .. .+.. .+.++++.+++. ++++.
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~-------~~------~~~~---~~~~i~~~~~g~-l~v~~ 74 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYP-------LP------TPDA---KVMCLTISSDGE-VWFTE 74 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEE-------CS------STTC---CEEEEEECTTSC-EEEEE
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEec-------CC------cccC---ceeeEEECCCCC-EEEeC
Confidence 34569999999999988877768899999987 3222100 00 0111 288899999875 66665
Q ss_pred ecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccC
Q 037120 175 STRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTG 254 (489)
Q Consensus 175 ~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~ 254 (489)
..+ +.|..||.. + . +. .+. +......+.++++.+++. ++++...++.|..||. +++.... ....
T Consensus 75 ~~~-~~i~~~~~~-g--~----~~---~~~--~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~~~~-~~~~ 138 (299)
T 2z2n_A 75 NAA-NKIGRITKK-G--I----IK---EYT--LPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGKIREY-ELPN 138 (299)
T ss_dssp TTT-TEEEEECTT-S--C----EE---EEE--CSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEEEE-ECSS
T ss_pred CCC-CeEEEECCC-C--c----EE---EEe--CCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCCEEEe-cCCC
Confidence 545 899999873 1 1 11 110 122345788999999887 7777777889999998 5442211 1122
Q ss_pred CCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccce-eecCCccCCCCeeEEEeCCCCccee
Q 037120 255 SHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAP-FHNHKEVCHLPLTSLKLASMLEKIG 318 (489)
Q Consensus 255 h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~~i~ 318 (489)
+...+..++++++|...++...++.|..||. +++.... +...... +.+++++++|....
T Consensus 139 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~----~~~i~~~~~g~l~v 198 (299)
T 2z2n_A 139 KGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASG----PVGITKGNDDALWF 198 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCC----EEEEEECTTSSEEE
T ss_pred CCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCc----ceeEEECCCCCEEE
Confidence 3456889999999987776666889999998 6553221 1222222 66777777766443
No 179
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.36 E-value=1.6e-09 Score=108.85 Aligned_cols=290 Identities=13% Similarity=0.092 Sum_probs=163.1
Q ss_pred ECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEE
Q 037120 104 FDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSI 183 (489)
Q Consensus 104 fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~v 183 (489)
.++.+.++++...++.|.|+|..+.+.... +. .+..+..+.|+|++..++ +++.| +.|.+
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~~v~~~--------i~----------~g~~p~~v~~SpDGr~ly-v~~~d-g~V~v 222 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTYEIKTV--------LD----------TGYAVHISRLSASGRYLF-VIGRD-GKVNM 222 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTCCEEEE--------EE----------CSSCEEEEEECTTSCEEE-EEETT-SEEEE
T ss_pred cCCCceEEEEeCCCCeEEEEECCCCeEEEE--------Ee----------CCCCccceEECCCCCEEE-EEcCC-CeEEE
Confidence 445566777788899999999998544431 10 011156799999997544 45556 99999
Q ss_pred EEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEe----cCCCcEEEEEeCCCcEEEEECCCCCcCceeeccC-----
Q 037120 184 YDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFS----AVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTG----- 254 (489)
Q Consensus 184 wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~----- 254 (489)
||+..... ..+.... .+ .....++|+ |+|+..+++...+++|.++|..+.+ .++.+..
T Consensus 223 iD~~~~t~---~~v~~i~------~G--~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~--~~~~i~~~~~~~ 289 (567)
T 1qks_A 223 IDLWMKEP---TTVAEIK------IG--SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE--PKKIQSTRGMTY 289 (567)
T ss_dssp EETTSSSC---CEEEEEE------CC--SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC--EEEEEECCEECT
T ss_pred EECCCCCC---cEeEEEe------cC--CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc--EEEEEecccccc
Confidence 99841111 2222211 11 135689999 6999444444577999999988866 4433321
Q ss_pred -----C-CCceeEEEEeecCCEEEEEeC-CCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceee
Q 037120 255 -----S-HGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIV 327 (489)
Q Consensus 255 -----h-~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~ 327 (489)
| ...+..+..++++..++..-. +|.|.++|....+.+.. +.+. .
T Consensus 290 ~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v------------~~i~-----------------~ 340 (567)
T 1qks_A 290 DEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKT------------TEIS-----------------A 340 (567)
T ss_dssp TTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEE------------EEEE-----------------C
T ss_pred ccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcccee------------eeee-----------------c
Confidence 1 125778888888776555544 89999999876542111 1110 0
Q ss_pred ccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCC-CCCCcCCCCccccccCCCccee-ecCCcEEEEeec-C
Q 037120 328 SQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCP-PPAWLSDSNNSADQLHLRKPSW-LSTNSIYAVGSS-S 404 (489)
Q Consensus 328 ~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~sgs-~ 404 (489)
......+.|+|+++++++.....+-..+++..++.+...... .....+ -+...| .|+++.+.+++. .
T Consensus 341 ~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Php----------g~g~~~~~p~~g~v~~t~~~g 410 (567)
T 1qks_A 341 ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHP----------GRGANFVHPTFGPVWATSHMG 410 (567)
T ss_dssp CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCC----------TTCEEEEETTTEEEEEEEBSS
T ss_pred cccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCC----------ccceeeECCCCCcEEEeCCCC
Confidence 011234456666666655554433223444444433221111 000000 022333 456566665543 5
Q ss_pred CCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccC-------cceeEEEec
Q 037120 405 DHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTK-------NSSLLVVSQ 477 (489)
Q Consensus 405 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~-------dg~i~v~~~ 477 (489)
++.|.|+|..+....... -+.++.+. .....-..+.+||+++.+.+... ..+|.||..
T Consensus 411 ~~~Vsvid~~~~~~~~~~---~kvv~~i~------------~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~ 475 (567)
T 1qks_A 411 DDSVALIGTDPEGHPDNA---WKILDSFP------------ALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDI 475 (567)
T ss_dssp SSEEEEEECCTTTCTTTB---TSEEEEEE------------CSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEG
T ss_pred CCeEEEecCCCCCCcccc---CEEEEEEe------------cCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEEC
Confidence 689999998873100000 02333333 22233355789999986666442 468999887
Q ss_pred ccc
Q 037120 478 KQQ 480 (489)
Q Consensus 478 ~~~ 480 (489)
+..
T Consensus 476 ~~~ 478 (567)
T 1qks_A 476 KAM 478 (567)
T ss_dssp GGC
T ss_pred Ccc
Confidence 654
No 180
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.34 E-value=3.6e-11 Score=114.99 Aligned_cols=178 Identities=16% Similarity=0.078 Sum_probs=109.9
Q ss_pred CCceeEEEECCCCcEEEEEec-CCeEEEEeCC-CcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEE
Q 037120 96 KPGISALDFDCKGIYLVSATR-SGCLTVHDFE-SLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVAC 173 (489)
Q Consensus 96 ~~~V~~~~fs~~g~~la~g~~-dg~i~vwd~~-~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s 173 (489)
...+.+++|+|+|++|+++.. ++.|++|++. +++... ........ .+..+..++|+|+++.++++
T Consensus 144 ~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~------------~~~~~~~~-~g~~p~~~~~spdg~~l~v~ 210 (365)
T 1jof_A 144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVEL------------VGSVDAPD-PGDHPRWVAMHPTGNYLYAL 210 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEE------------EEEEECSS-TTCCEEEEEECTTSSEEEEE
T ss_pred CCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEE------------eeeEecCC-CCCCCCEeEECCCCCEEEEE
Confidence 345899999999998887764 6899999997 432211 00011000 01227889999999745444
Q ss_pred EecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCccc------CeeEEE-EecCCCcEEEEEeC-CC-----cEEEEE
Q 037120 174 ASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQK------GLSDLA-FSAVNTSRLIASDT-HG-----VVNIWD 240 (489)
Q Consensus 174 ~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~------~v~~~~-~~~~~~~~l~s~s~-dg-----~i~iwd 240 (489)
...+ +.|.+|++....................+.+|.. .+..++ |+|+|+ +|+++.. +. .|.+||
T Consensus 211 ~~~~-~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~-~l~v~~~~~~~~~~~~i~v~~ 288 (365)
T 1jof_A 211 MEAG-NRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK-YMFASSRANKFELQGYIAGFK 288 (365)
T ss_dssp ETTT-TEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSS-EEEEEEEESSTTSCCEEEEEE
T ss_pred ECCC-CeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCC-EEEEECCCCCCCCCCeEEEEE
Confidence 4444 8999999843211110000111100000123333 588999 999999 6665553 23 899999
Q ss_pred CC-CCCcCcee-eccCCCCceeEEEEee---cCCEEEEEeC-CCeEEEEEcCCC
Q 037120 241 RR-VGVLPSLE-LSTGSHGTLNSIQLHA---ENQIIFAAGK-HGSIYLWDLRGG 288 (489)
Q Consensus 241 ~~-~~~~~~~~-~~~~h~~~v~~~~~~p---~~~~l~~~~~-dg~i~lwd~~~~ 288 (489)
+. +++...+. ....+...+..++|+| +|++|++++. ++.|++|++...
T Consensus 289 ~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 289 LRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 96 44411111 1223445677899999 8999999987 599999998764
No 181
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.34 E-value=4.8e-10 Score=104.46 Aligned_cols=160 Identities=14% Similarity=0.133 Sum_probs=100.5
Q ss_pred CceeEEEECCCCcEEEE-------EecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCC-CC
Q 037120 97 PGISALDFDCKGIYLVS-------ATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLA-NQ 168 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~-------g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~-~~ 168 (489)
....+++|+++|.++++ ++.++.|.+||..+.+.... ..+ ...++... +.+++++++ +
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~--------~~~--~~~~~~~~---~~~i~~~~~~g- 83 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVI--------CKP--EVNGYGGI---PAGCQCDRDAN- 83 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEE--------ECC--EETTEECC---EEEEEECSSSS-
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEE--------Eec--ccCCCCCC---CceEEEecCCC-
Confidence 34678999999998888 67789999999876433221 000 00011122 788999998 5
Q ss_pred CEEEEEecCCCEEEEEEeccCCCCCceee-eeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCC--------------
Q 037120 169 DEVACASTRSNVVSIYDIGYISDEPVEVL-KTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTH-------------- 233 (489)
Q Consensus 169 ~~l~s~~~d~g~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~d-------------- 233 (489)
.++++.. . +.|.+||.. + .. ..+ .... .......++++++.+++. ++++...+
T Consensus 84 ~l~v~~~-~-~~l~~~d~~-g--~~-~~~~~~~~-----~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~ 151 (314)
T 1pjx_A 84 QLFVADM-R-LGLLVVQTD-G--TF-EEIAKKDS-----EGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEK 151 (314)
T ss_dssp EEEEEET-T-TEEEEEETT-S--CE-EECCSBCT-----TSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSS
T ss_pred cEEEEEC-C-CCEEEEeCC-C--CE-EEEEeccC-----CCccccCCcCEEECCCCC-EEEEecCcccccccccccccCC
Confidence 3555555 3 589999984 2 11 111 0000 011234688999999998 77766554
Q ss_pred -CcEEEEECCCCCcCceeeccCCCCceeEEEEe----ecCCEEEEEe-CCCeEEEEEcC
Q 037120 234 -GVVNIWDRRVGVLPSLELSTGSHGTLNSIQLH----AENQIIFAAG-KHGSIYLWDLR 286 (489)
Q Consensus 234 -g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~----p~~~~l~~~~-~dg~i~lwd~~ 286 (489)
+.|..||.. ++ .. ....+......++|+ |+++.++++. .++.|.+||+.
T Consensus 152 ~~~l~~~~~~-g~--~~-~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 152 FGSIYCFTTD-GQ--MI-QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp CEEEEEECTT-SC--EE-EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred CCeEEEECCC-CC--EE-EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 567777765 43 22 222233456889999 9997776665 48899999976
No 182
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.33 E-value=2.3e-11 Score=115.29 Aligned_cols=183 Identities=16% Similarity=0.149 Sum_probs=125.3
Q ss_pred ceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecC
Q 037120 98 GISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTR 177 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d 177 (489)
.++.+++++...+|++|+.++ +.||+++.......+.. +..++. ....... |+.|+| ++. .|+.+ .+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~---~~~~~~--~~~~lp~---V~~l~f--d~~-~L~v~-~~ 105 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDS---TPLTFK--WEKEIPD---VIFVCF--HGD-QVLVS-TR 105 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSS---CCCCCS--EEEECTT---EEEEEE--ETT-EEEEE-ES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhcccc---ccccce--EEeeCCC---eeEEEE--CCC-EEEEE-cC
Confidence 589999999999999999985 66699876441110000 011110 0111111 889999 654 66666 55
Q ss_pred CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCC
Q 037120 178 SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHG 257 (489)
Q Consensus 178 ~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~ 257 (489)
+.|++||+...... . .. ..|...+.++.+.+ + .++.++.||.|.+||+..+. ... +..
T Consensus 106 -~~l~v~dv~sl~~~--~------~~----~~~~~~v~~i~~~~--p-~~av~~~dG~L~v~dl~~~~--~~~----~~~ 163 (388)
T 1xip_A 106 -NALYSLDLEELSEF--R------TV----TSFEKPVFQLKNVN--N-TLVILNSVNDLSALDLRTKS--TKQ----LAQ 163 (388)
T ss_dssp -SEEEEEESSSTTCE--E------EE----EECSSCEEEEEECS--S-EEEEEETTSEEEEEETTTCC--EEE----EEE
T ss_pred -CcEEEEEchhhhcc--C------cc----ceeecceeeEEecC--C-CEEEEECCCCEEEEEccCCc--ccc----ccC
Confidence 99999999543211 1 11 23455788877664 3 38888999999999999765 332 346
Q ss_pred ceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcc--ccee------e---cCCccCCCCeeEEEeCCCCcceeecc
Q 037120 258 TLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRT--SAPF------H---NHKEVCHLPLTSLKLASMLEKIGTLK 321 (489)
Q Consensus 258 ~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~--~~~~------~---~~~~~~~~~v~~l~~~~~~~~i~~~~ 321 (489)
.|+|++|+|+| ++.|..||+|++|+...+.. ..++ . +|... |.++.|.+++.++....
T Consensus 164 ~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~----V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 164 NVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYS----PLSVTILSPQDFLAVFG 232 (388)
T ss_dssp SEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSE----EEEEEESSSSEEEEEEE
T ss_pred CceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCee----EEEEEEecCCeEEEEEc
Confidence 89999999999 67888899999999887764 4455 2 24444 99999999998886543
No 183
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.33 E-value=3.8e-09 Score=106.10 Aligned_cols=174 Identities=12% Similarity=0.066 Sum_probs=117.9
Q ss_pred ceeEEEECCCCcEEEEEecCCeEEEEeCC--CcccccCCCCCCCCCcccccccccCCCCCCceeEEEee----CCCCCEE
Q 037120 98 GISALDFDCKGIYLVSATRSGCLTVHDFE--SLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWN----LANQDEV 171 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~dg~i~vwd~~--~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~----~~~~~~l 171 (489)
.+..++|+|||++|.+++.|+.|.+||+. +.+.... . . .+.....++|+ |+++.++
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~--------i------~----~G~~P~~ia~s~~~~pDGk~l~ 259 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAE--------I------K----IGSEARSIETSKMEGWEDKYAI 259 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEE--------E------E----CCSEEEEEEECCSTTCTTTEEE
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEE--------E------e----cCCCCceeEEccccCCCCCEEE
Confidence 46789999999999999999999999995 4322221 0 0 01115569999 6988666
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecC---Cccc-CeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcC
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGS---DVQK-GLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLP 247 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~---~h~~-~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~ 247 (489)
++...+ ++|.|+|.... +.+........... .|.. .+..+..+++++..+++...+|.|.++|....+..
T Consensus 260 v~n~~~-~~v~ViD~~t~-----~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~ 333 (567)
T 1qks_A 260 AGAYWP-PQYVIMDGETL-----EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNL 333 (567)
T ss_dssp EEEEET-TEEEEEETTTC-----CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEE
T ss_pred EEEccC-CeEEEEECCCC-----cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccc
Confidence 666655 99999997332 22222111000001 1222 67889999988856666678899999999875422
Q ss_pred ceeeccCCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCCCcccceeec
Q 037120 248 SLELSTGSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRGGRTSAPFHN 296 (489)
Q Consensus 248 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~~~~~~~~~ 296 (489)
.+..+ ........+.|+|++++++++.. ++.|.++|+.+++.+..+..
T Consensus 334 ~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 334 KTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp EEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred eeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence 22222 22345668899999999988875 88999999999887665543
No 184
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.29 E-value=4.5e-10 Score=117.77 Aligned_cols=161 Identities=9% Similarity=0.049 Sum_probs=101.3
Q ss_pred ceeEEEECCCCcEEEEEecC-----CeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEE
Q 037120 98 GISALDFDCKGIYLVSATRS-----GCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVA 172 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~d-----g~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~ 172 (489)
.+..++|||||++||.++.+ ..|++||+.+++.... ..+... +..++|+|+ +.+++
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~---------------~~~~~~---~~~~~wspD-~~l~~ 224 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD---------------ELKWVK---FSGLAWLGN-DALLY 224 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE---------------EEEEEE---SCCCEESTT-SEEEE
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc---------------cCCCce---eccEEEECC-CEEEE
Confidence 48899999999999988764 4699999998544321 000000 245899999 75555
Q ss_pred EEecCCC-------------EEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCC-----C
Q 037120 173 CASTRSN-------------VVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTH-----G 234 (489)
Q Consensus 173 s~~~d~g-------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~d-----g 234 (489)
+.. +.. .|.+|++....... . .+.....|...+..+.|+|+|+ .|+..+.+ .
T Consensus 225 ~~~-~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~--~------lv~~~~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~~~ 294 (741)
T 1yr2_A 225 SRF-AEPKEGQAFQALNYNQTVWLHRLGTPQSAD--Q------PVFATPELPKRGHGASVSSDGR-WVVITSSEGTDPVN 294 (741)
T ss_dssp EEC-CCC--------CCCCCEEEEEETTSCGGGC--E------EEECCTTCTTCEEEEEECTTSC-EEEEEEECTTCSCC
T ss_pred EEe-cCcccccccccCCCCCEEEEEECCCCchhC--E------EEeccCCCCeEEEEEEECCCCC-EEEEEEEccCCCcc
Confidence 543 312 48899984332111 1 1111233444688999999999 66666543 3
Q ss_pred cEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeC----CCeEEEEEcCCC
Q 037120 235 VVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGK----HGSIYLWDLRGG 288 (489)
Q Consensus 235 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~----dg~i~lwd~~~~ 288 (489)
.|++||+.++...+...+..+...+... ++|+|+.|+..+. ++.|.+||+.++
T Consensus 295 ~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 295 TVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp EEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred eEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 8999999876211122333444444444 3589998888776 345888998764
No 185
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.27 E-value=3.8e-10 Score=106.17 Aligned_cols=198 Identities=10% Similarity=-0.000 Sum_probs=121.8
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcc-cccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEe
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLY-YQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAS 175 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~-~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~ 175 (489)
.....++|+++|+++++...++.|++||..... ..... +.......-..+... ...++++|++..++++.+
T Consensus 91 ~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~-----~~~~~~g~~~~~~~~---P~~ia~~~~~g~lyv~d~ 162 (329)
T 3fvz_A 91 YLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLIL-----GRSMQPGSDQNHFCQ---PTDVAVEPSTGAVFVSDG 162 (329)
T ss_dssp SSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEE-----SBTTBCCCSTTCCSS---EEEEEECTTTCCEEEEEC
T ss_pred CCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEe-----cccCCCCCCccccCC---CcEEEEeCCCCeEEEEeC
Confidence 458899999999999999999999999987531 11100 000000000112222 778999994345777775
Q ss_pred -cCCCEEEEEEeccCCCCCceeeeeceeeee---ecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceee
Q 037120 176 -TRSNVVSIYDIGYISDEPVEVLKTRRSVTV---VGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLEL 251 (489)
Q Consensus 176 -~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~---~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 251 (489)
.+ +.|++||.. + ..+......-. ...++......|++.|++..++++...++.|++||..+++ .+..
T Consensus 163 ~~~-~~I~~~~~~-g-----~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~--~~~~ 233 (329)
T 3fvz_A 163 YCN-SRIVQFSPS-G-----KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE--FVRE 233 (329)
T ss_dssp SSC-CEEEEECTT-S-----CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC--EEEE
T ss_pred CCC-CeEEEEcCC-C-----CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc--EEEE
Confidence 46 899999952 1 11111110000 0012334588999999944377888889999999998766 4444
Q ss_pred c--cCCCCceeEEEEee------cCCEEEEEeCCCeEEEEEcCCCcccceee---cCCccCCCCeeEEEeCCCCc
Q 037120 252 S--TGSHGTLNSIQLHA------ENQIIFAAGKHGSIYLWDLRGGRTSAPFH---NHKEVCHLPLTSLKLASMLE 315 (489)
Q Consensus 252 ~--~~h~~~v~~~~~~p------~~~~l~~~~~dg~i~lwd~~~~~~~~~~~---~~~~~~~~~v~~l~~~~~~~ 315 (489)
+ ..+...+..++|+| +++..++...+..|++||+.+++.+..+. .+... ...|+++|+|.
T Consensus 234 ~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~----p~~ia~~~dG~ 304 (329)
T 3fvz_A 234 IKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDM----PHDIVASEDGT 304 (329)
T ss_dssp ECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSS----EEEEEECTTSE
T ss_pred EeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCC----eeEEEECCCCC
Confidence 3 24556788999999 33333333335689999999988776663 22222 55555555553
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.26 E-value=1.9e-10 Score=110.89 Aligned_cols=193 Identities=8% Similarity=-0.082 Sum_probs=110.5
Q ss_pred eEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCc----eeEEEeeCCCCCEEEEE-
Q 037120 100 SALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQ----LDAVRWNLANQDEVACA- 174 (489)
Q Consensus 100 ~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~----V~~v~~~~~~~~~l~s~- 174 (489)
..+.|+|||++|+.++.++.|.+||+.+.+.......+. ...+......-...... ...++|+|++..+++..
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~--~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 161 (396)
T 3c5m_A 84 FGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDE--EWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEF 161 (396)
T ss_dssp TTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCT--TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred ccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEeccc--ccCCCCCEEEeccCCccccccccccccCCCCcceeeeee
Confidence 347899999999999999999999998754322100000 00000000000000000 00035678776444332
Q ss_pred ---ecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEec-CCCcEEEEEeCC------CcEEEEECCCC
Q 037120 175 ---STRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSA-VNTSRLIASDTH------GVVNIWDRRVG 244 (489)
Q Consensus 175 ---~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~s~d------g~i~iwd~~~~ 244 (489)
..+ ..|.+||+..+ +. .. . ..+...+..+.|+| ++. .|+..+.+ ..|.+||+..+
T Consensus 162 ~~~~~~-~~l~~~d~~~g--~~-~~------~----~~~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (396)
T 3c5m_A 162 YHTNPT-CRLIKVDIETG--EL-EV------I----HQDTAWLGHPIYRPFDDS-TVGFCHEGPHDLVDARMWLVNEDGS 226 (396)
T ss_dssp HHTCCC-EEEEEEETTTC--CE-EE------E----EEESSCEEEEEEETTEEE-EEEEEECSCSSSCSCCCEEEETTSC
T ss_pred ccCCCc-ceEEEEECCCC--cE-Ee------e----ccCCcccccceECCCCCC-EEEEEecCCCCCCCceEEEEECCCC
Confidence 333 78999998432 11 11 1 12445788999999 676 66665543 46888998765
Q ss_pred CcCceeeccCC-CCceeEEEEeecCCEEEEEeCC-----CeEEEEEcCCCcccceeecCCccCCCCeeEEEeCC-CCcce
Q 037120 245 VLPSLELSTGS-HGTLNSIQLHAENQIIFAAGKH-----GSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLAS-MLEKI 317 (489)
Q Consensus 245 ~~~~~~~~~~h-~~~v~~~~~~p~~~~l~~~~~d-----g~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~i 317 (489)
+ ........ ...+..++|+|+|+.|+.++.+ +.|++||+.+++... +.... . .. +.|+| +|+.+
T Consensus 227 ~--~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~-~----~~-~~~s~~dg~~l 297 (396)
T 3c5m_A 227 N--VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEE-VMVMP-P----CS-HLMSNFDGSLM 297 (396)
T ss_dssp C--CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEE-EEECC-S----EE-EEEECSSSSEE
T ss_pred c--eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEE-eeeCC-C----CC-CCccCCCCceE
Confidence 4 22222211 2357889999999988777553 559999998876422 22111 1 33 77777 77755
Q ss_pred e
Q 037120 318 G 318 (489)
Q Consensus 318 ~ 318 (489)
+
T Consensus 298 ~ 298 (396)
T 3c5m_A 298 V 298 (396)
T ss_dssp E
T ss_pred E
Confidence 4
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.25 E-value=3.1e-09 Score=99.78 Aligned_cols=278 Identities=8% Similarity=-0.056 Sum_probs=155.2
Q ss_pred cCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCce
Q 037120 116 RSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVE 195 (489)
Q Consensus 116 ~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~ 195 (489)
.+++|.++|.++.+.... ...... +. .-+.....+.+.. ..++++...+ +.|.+||.... +
T Consensus 15 ~~~~l~~~d~~t~~~~~~--------i~~~~n--~~-~lg~~~~~i~~~~--~~lyv~~~~~-~~v~viD~~t~-----~ 75 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENE--------VFYRAN--GF-KLGDVAQSMVIRD--GIGWIVVNNS-HVIFAIDINTF-----K 75 (328)
T ss_dssp CCBEEEEEETTTTEEECS--------HHHHHH--SS-CCBSCEEEEEEET--TEEEEEEGGG-TEEEEEETTTC-----C
T ss_pred CCceEEEEECCCCEEhhh--------hHhhhc--Cc-ccCccceEEEEEC--CEEEEEEcCC-CEEEEEECccc-----E
Confidence 488999999998654431 100000 00 0001145577753 3466666655 99999999433 2
Q ss_pred eeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCC-----CceeEEEEeecCCE
Q 037120 196 VLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSH-----GTLNSIQLHAENQI 270 (489)
Q Consensus 196 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~-----~~v~~~~~~p~~~~ 270 (489)
.+.... .......+++++++. ++++...++.|.+||..+++ ....+.... .....+++ ++..
T Consensus 76 ~~~~i~--------~~~~p~~i~~~~~g~-lyv~~~~~~~v~~iD~~t~~--~~~~i~~g~~~~~~~~p~~i~~--~~~~ 142 (328)
T 3dsm_A 76 EVGRIT--------GFTSPRYIHFLSDEK-AYVTQIWDYRIFIINPKTYE--ITGYIECPDMDMESGSTEQMVQ--YGKY 142 (328)
T ss_dssp EEEEEE--------CCSSEEEEEEEETTE-EEEEEBSCSEEEEEETTTTE--EEEEEECTTCCTTTCBCCCEEE--ETTE
T ss_pred EEEEcC--------CCCCCcEEEEeCCCe-EEEEECCCCeEEEEECCCCe--EEEEEEcCCccccCCCcceEEE--ECCE
Confidence 222111 124678899988885 66666589999999999875 332222111 14556777 4555
Q ss_pred EEEEe--CCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEe
Q 037120 271 IFAAG--KHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHL 348 (489)
Q Consensus 271 l~~~~--~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~ 348 (489)
++++. .++.|.+||+.+++.+..+... .. ...+.++++|+.+........... +..+...+..
T Consensus 143 lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~----p~~i~~~~dG~l~v~~~~~~~~~~-------~~~~~~~v~~--- 207 (328)
T 3dsm_A 143 VYVNCWSYQNRILKIDTETDKVVDELTIG-IQ----PTSLVMDKYNKMWTITDGGYEGSP-------YGYEAPSLYR--- 207 (328)
T ss_dssp EEEEECTTCCEEEEEETTTTEEEEEEECS-SC----BCCCEECTTSEEEEEBCCBCTTCS-------SCBCCCEEEE---
T ss_pred EEEEcCCCCCEEEEEECCCCeEEEEEEcC-CC----ccceEEcCCCCEEEEECCCccCCc-------cccCCceEEE---
Confidence 55554 4899999999998877666542 22 456777777765543111000000 0000111111
Q ss_pred cCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcc
Q 037120 349 DDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNED 428 (489)
Q Consensus 349 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~ 428 (489)
++..++.+......+. . .....+++.|++..+.++.+ .|++||..++ +.
T Consensus 208 -------id~~t~~v~~~~~~~~----g-------~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~----------~~ 256 (328)
T 3dsm_A 208 -------IDAETFTVEKQFKFKL----G-------DWPSEVQLNGTRDTLYWINN---DIWRMPVEAD----------RV 256 (328)
T ss_dssp -------EETTTTEEEEEEECCT----T-------CCCEEEEECTTSCEEEEESS---SEEEEETTCS----------SC
T ss_pred -------EECCCCeEEEEEecCC----C-------CCceeEEEecCCCEEEEEcc---EEEEEECCCC----------ce
Confidence 1111111111110000 0 01234667777777666533 8999999877 33
Q ss_pred cchhhHhhhhcccCCccc-CCCceEEEEeeC-CCCeEEec----cCcceeEEEecccccc
Q 037120 429 IESLSERTKLKKENRFVP-LSEGVTACVTHP-LNNTIVAG----TKNSSLLVVSQKQQCT 482 (489)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~-h~~~V~~va~~p-~~~~i~sg----s~dg~i~v~~~~~~~~ 482 (489)
... . ++. ......+++++| .+..+++. ..++.|.+|..+.+-+
T Consensus 257 ~~~-~----------~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~ 305 (328)
T 3dsm_A 257 PVR-P----------FLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLI 305 (328)
T ss_dssp CSS-C----------SBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEE
T ss_pred eee-e----------eecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEE
Confidence 211 0 001 245688999999 55677776 7899999998775544
No 188
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.25 E-value=8.8e-10 Score=104.98 Aligned_cols=90 Identities=7% Similarity=0.161 Sum_probs=70.1
Q ss_pred EEEecCCCcEEEEEe----------CCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcC
Q 037120 217 LAFSAVNTSRLIASD----------THGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLR 286 (489)
Q Consensus 217 ~~~~~~~~~~l~s~s----------~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~ 286 (489)
++|+|++...+++.. .++.|.+||+.+.+ .+..+..+. +.+++|+|+|++|++++. +.|.+||..
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDIS 333 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECC
Confidence 789999883444433 13589999999876 566665555 899999999999998886 999999999
Q ss_pred CC--cccceeecCCccCCCCeeEEEeCCCCc
Q 037120 287 GG--RTSAPFHNHKEVCHLPLTSLKLASMLE 315 (489)
Q Consensus 287 ~~--~~~~~~~~~~~~~~~~v~~l~~~~~~~ 315 (489)
++ +.+..+...... ...+.++|+|.
T Consensus 334 t~~l~~~~~i~~~G~~----P~~~~~~p~G~ 360 (361)
T 2oiz_A 334 QPEPKLLRTIEGAAEA----SLQVQFHPVGG 360 (361)
T ss_dssp SSSCEEEEEETTSCSS----EEEEEECCCSC
T ss_pred CCcceeeEEeccCCCC----cEEEEecCCCC
Confidence 99 878777544444 77888888875
No 189
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.24 E-value=7.6e-10 Score=104.72 Aligned_cols=129 Identities=9% Similarity=0.087 Sum_probs=87.0
Q ss_pred eeEEEeeCCCCCEEEEEe--------cCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEE
Q 037120 158 LDAVRWNLANQDEVACAS--------TRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIA 229 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~--------~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 229 (489)
+..+++ ++..++++.. .+ +.|.+||+..+ .. ..+ ..+..++|+|+|+ .|+.
T Consensus 17 ~~~~~~--dG~~i~~~~~~~~~~~~~~~-~~l~~~d~~~~--~~-~~l--------------~~~~~~~~SpDg~-~la~ 75 (347)
T 2gop_A 17 LSDPRT--KGELVAYVLTKANLKDNKYE-NTIVIENLKNN--AR-RFI--------------ENATMPRISPDGK-KIAF 75 (347)
T ss_dssp EEEEEE--ETTEEEEEEEEEETTTTEEE-EEEEEEETTTC--CE-EEE--------------ESCEEEEECTTSS-EEEE
T ss_pred cccceE--CCcEEEEEEeecCcccCCcc-ceEEEEeCCCC--ce-EEc--------------ccCCCeEECCCCC-EEEE
Confidence 677788 7765555432 13 68899998432 11 111 2678899999999 7776
Q ss_pred EeCC---C--cEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCC---------------------------
Q 037120 230 SDTH---G--VVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKH--------------------------- 277 (489)
Q Consensus 230 ~s~d---g--~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d--------------------------- 277 (489)
++.+ + .|.+||+.+++ ...... +.. +..++|+|+|+.|+.++.+
T Consensus 76 ~~~~~~~~~~~l~~~~~~~g~--~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 151 (347)
T 2gop_A 76 MRANEEKKVSEIWVADLETLS--SKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEK 151 (347)
T ss_dssp EEEETTTTEEEEEEEETTTTE--EEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CE
T ss_pred EEeccCCCcceEEEEECCCCc--eEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCcc
Confidence 6643 3 48888888765 232222 233 8999999999988888642
Q ss_pred CeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCccee
Q 037120 278 GSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIG 318 (489)
Q Consensus 278 g~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~ 318 (489)
..|++||+.+++.+..+.. . . +..+.|+|+| .+.
T Consensus 152 ~~l~~~d~~~~~~~~~l~~-~-~----~~~~~~spdg-~~~ 185 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFEK-P-R----FSSGIWHRDK-IVV 185 (347)
T ss_dssp EEEEEEETTTTEEEEEEEE-E-T----TCEEEEETTE-EEE
T ss_pred ceEEEEECCCCeEEeeecC-C-C----cccccCCCCe-EEE
Confidence 5799999988775344544 2 4 7888899988 443
No 190
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.23 E-value=2.1e-09 Score=98.72 Aligned_cols=183 Identities=9% Similarity=0.058 Sum_probs=118.4
Q ss_pred CceeEEEE-CCCCcEEEEEec-CCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEE
Q 037120 97 PGISALDF-DCKGIYLVSATR-SGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACA 174 (489)
Q Consensus 97 ~~V~~~~f-s~~g~~la~g~~-dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~ 174 (489)
..+.++++ +++|.++++... ++.|.+||... ..... .. ..+... +.++++++++. ++++.
T Consensus 77 ~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g-~~~~~--------~~-----~~~~~~---~~~i~~~~~g~-l~v~~ 138 (286)
T 1q7f_A 77 LYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYG-QFVRK--------FG-----ATILQH---PRGVTVDNKGR-IIVVE 138 (286)
T ss_dssp SSEEEEEEETTTTEEEEEECGGGCEEEEECTTS-CEEEE--------EC-----TTTCSC---EEEEEECTTSC-EEEEE
T ss_pred cCceEEEEEcCCCeEEEEcCCCCCEEEEECCCC-cEEEE--------ec-----CccCCC---ceEEEEeCCCC-EEEEE
Confidence 35889999 578887777754 88999999543 22110 00 011122 78899999985 77776
Q ss_pred ecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeecc-
Q 037120 175 STRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELST- 253 (489)
Q Consensus 175 ~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~- 253 (489)
..+ +.|.+||... ..+.... ..++...+..+++.+++. ++++...++.|++||... + .+..+.
T Consensus 139 ~~~-~~i~~~~~~g------~~~~~~~-----~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g-~--~~~~~~~ 202 (286)
T 1q7f_A 139 CKV-MRVIIFDQNG------NVLHKFG-----CSKHLEFPNGVVVNDKQE-IFISDNRAHCVKVFNYEG-Q--YLRQIGG 202 (286)
T ss_dssp TTT-TEEEEECTTS------CEEEEEE-----CTTTCSSEEEEEECSSSE-EEEEEGGGTEEEEEETTC-C--EEEEESC
T ss_pred CCC-CEEEEEcCCC------CEEEEeC-----CCCccCCcEEEEECCCCC-EEEEECCCCEEEEEcCCC-C--EEEEEcc
Confidence 656 8999999621 1111111 123445789999999988 888878899999999753 3 233332
Q ss_pred -CCCCceeEEEEeecCCEEEEEeCCC-eEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcc
Q 037120 254 -GSHGTLNSIQLHAENQIIFAAGKHG-SIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEK 316 (489)
Q Consensus 254 -~h~~~v~~~~~~p~~~~l~~~~~dg-~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 316 (489)
++...+..++++|+|+++++...++ .|++||. +++.+..+..+... ..+.+++++|+|..
T Consensus 203 ~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~--~~~~~i~~~~~g~l 264 (286)
T 1q7f_A 203 EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKH--AQCFDVALMDDGSV 264 (286)
T ss_dssp TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCC--SCEEEEEEETTTEE
T ss_pred CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCC--CcceeEEECCCCcE
Confidence 2235788999999998877777776 9999995 45555555433211 11445555555543
No 191
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.21 E-value=3e-09 Score=100.01 Aligned_cols=187 Identities=13% Similarity=0.093 Sum_probs=119.3
Q ss_pred CCCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEE
Q 037120 95 GKPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACA 174 (489)
Q Consensus 95 ~~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~ 174 (489)
....+.+++|+++|++++++..++.|.+||..+.+.... . ..+... +.+++|++++. ++++.
T Consensus 43 ~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~--------~------~~~~~~---~~~i~~~~dg~-l~v~~ 104 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRP--------F------VSHKAN---PAAIKIHKDGR-LFVCY 104 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEE--------E------ECSSSS---EEEEEECTTSC-EEEEE
T ss_pred cCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEE--------e------eCCCCC---cceEEECCCCc-EEEEe
Confidence 344578999999999888899999999999887433220 0 011122 88999999985 65555
Q ss_pred ecC---CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeC------CCcEEEEECCCCC
Q 037120 175 STR---SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDT------HGVVNIWDRRVGV 245 (489)
Q Consensus 175 ~~d---~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~------dg~i~iwd~~~~~ 245 (489)
..+ .+.|.+||....... ..+. ...+...++++++.|++. ++++... .+.|..+|..+++
T Consensus 105 ~~~~~~~~~i~~~d~~~~~~~--~~~~--------~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~ 173 (333)
T 2dg1_A 105 LGDFKSTGGIFAATENGDNLQ--DIIE--------DLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRT 173 (333)
T ss_dssp CTTSSSCCEEEEECTTSCSCE--EEEC--------SSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCC
T ss_pred CCCCCCCceEEEEeCCCCEEE--EEEc--------cCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCE
Confidence 421 048999998432110 0111 012345789999999998 7666553 3566667765543
Q ss_pred cCceeeccCCCCceeEEEEeecCCEEEEEe-CCCeEEEEEcCC-Cccccee--------ecCCccCCCCeeEEEeCCCCc
Q 037120 246 LPSLELSTGSHGTLNSIQLHAENQIIFAAG-KHGSIYLWDLRG-GRTSAPF--------HNHKEVCHLPLTSLKLASMLE 315 (489)
Q Consensus 246 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~lwd~~~-~~~~~~~--------~~~~~~~~~~v~~l~~~~~~~ 315 (489)
.. .+..+...+..++|+|+++.++.+. .++.|++||+.+ +..+..+ .++ .. +..++++++|.
T Consensus 174 --~~-~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~----~~~i~~d~~G~ 245 (333)
T 2dg1_A 174 --VT-PIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EG----PDSCCIDSDDN 245 (333)
T ss_dssp --EE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SE----EEEEEEBTTCC
T ss_pred --EE-EeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CC----CCceEECCCCC
Confidence 22 2222234578999999999766654 488999999974 3333221 111 23 77899999887
Q ss_pred cee
Q 037120 316 KIG 318 (489)
Q Consensus 316 ~i~ 318 (489)
.+.
T Consensus 246 l~v 248 (333)
T 2dg1_A 246 LYV 248 (333)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 192
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.21 E-value=8.7e-10 Score=115.10 Aligned_cols=202 Identities=9% Similarity=0.003 Sum_probs=118.9
Q ss_pred CCcccCeeEEEEecCCCcEEEEEeCC-C----cEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCe---
Q 037120 208 SDVQKGLSDLAFSAVNTSRLIASDTH-G----VVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGS--- 279 (489)
Q Consensus 208 ~~h~~~v~~~~~~~~~~~~l~s~s~d-g----~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~--- 279 (489)
.+|...+..++|+|||+ +|+.++.+ | .|++||+.+++ ....... ...+..++|+|||+.|+.++.++.
T Consensus 121 ~~~~~~~~~~~~SPDg~-~la~~~~~~G~~~~~i~v~d~~tg~--~~~~~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~ 196 (710)
T 2xdw_A 121 DDGTVALRGYAFSEDGE-YFAYGLSASGSDWVTIKFMKVDGAK--ELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGK 196 (710)
T ss_dssp TTSCEEEEEEEECTTSS-EEEEEEEETTCSCEEEEEEETTTTE--EEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSC
T ss_pred cCCCEEEEEEEECCCCC-EEEEEEcCCCCceEEEEEEECCCCC--CCccccc-CcccceEEEEeCCCEEEEEEECCcccc
Confidence 34555788999999999 77665533 3 89999999876 3322211 223678999999999999988665
Q ss_pred -------------EEEEEcCCCccc--ceeec--CCccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCe
Q 037120 280 -------------IYLWDLRGGRTS--APFHN--HKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSY 342 (489)
Q Consensus 280 -------------i~lwd~~~~~~~--~~~~~--~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~ 342 (489)
|++|++.+++.. ..+.. +... +..+.|+|||+.+.......... ...
T Consensus 197 ~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~----~~~~~~SpDg~~l~~~~~~~~~~------------~~~ 260 (710)
T 2xdw_A 197 SDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKW----MGGAELSDDGRYVLLSIREGCDP------------VNR 260 (710)
T ss_dssp CSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTC----EEEEEECTTSCEEEEEEECSSSS------------CCE
T ss_pred ccccccccCCCCEEEEEECCCCcccceEEeccCCCCeE----EEEEEEcCCCCEEEEEEEccCCC------------ccE
Confidence 999999887632 11222 2223 56777777776654311100000 011
Q ss_pred EEEEEecCCceEEEEeec------c--ceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCC---CcEEEE
Q 037120 343 QLAFHLDDGWSGVLDVYN------S--RVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSD---HGIHLL 411 (489)
Q Consensus 343 ~~~~~~~~~w~~~~~~~~------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d---~~i~vw 411 (489)
+ .+++... + ....+.. ... .....|.++|+.+++.+..+ ..|++|
T Consensus 261 l----------~~~d~~~~~~~~~~~~~~~~l~~---~~~-----------~~~~~~s~dg~~l~~~s~~~~~~~~l~~~ 316 (710)
T 2xdw_A 261 L----------WYCDLQQESNGITGILKWVKLID---NFE-----------GEYDYVTNEGTVFTFKTNRHSPNYRLINI 316 (710)
T ss_dssp E----------EEEEGGGSSSSSCSSCCCEEEEC---SSS-----------SCEEEEEEETTEEEEEECTTCTTCEEEEE
T ss_pred E----------EEEECcccccccCCccceEEeeC---CCC-----------cEEEEEeccCCEEEEEECCCCCCCEEEEE
Confidence 1 1122211 1 0111100 000 01124677777777765544 379999
Q ss_pred eccCCCCCCeeeccCcc--cchhhHhhhhcccCCcccCCC--ceEEEEeeCCCCeEEeccCcceeEEE
Q 037120 412 DFFPGSSSPSHVDYNED--IESLSERTKLKKENRFVPLSE--GVTACVTHPLNNTIVAGTKNSSLLVV 475 (489)
Q Consensus 412 d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~h~~--~V~~va~~p~~~~i~sgs~dg~i~v~ 475 (489)
|+.++ .. ...+. +|.. .|.+++|++.+..+++...||...||
T Consensus 317 d~~~~----------~~~~~~~l~------------~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~ 362 (710)
T 2xdw_A 317 DFTDP----------EESKWKVLV------------PEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQ 362 (710)
T ss_dssp ETTSC----------CGGGCEEEE------------CCCSSCEEEEEEEETTTEEEEEEEETTEEEEE
T ss_pred eCCCC----------Ccccceecc------------CCCCCCeEEEEEEEcCCEEEEEEEECCEEEEE
Confidence 98766 21 22222 4443 68889999888888999889865554
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.20 E-value=4e-09 Score=96.23 Aligned_cols=153 Identities=8% Similarity=-0.031 Sum_probs=102.5
Q ss_pred CCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEe
Q 037120 107 KGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDI 186 (489)
Q Consensus 107 ~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~ 186 (489)
.+++|++++.|+.|.+||.++++..-. +. .+. ...+.++.+.|++. ++++ . + +.|..||.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~--------~~------~~~--~~~~~~~~~~pdG~-ilvs-~-~-~~V~~~d~ 63 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWE--------YP------LEK--GWECNSVAATKAGE-ILFS-Y-S-KGAKMITR 63 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEE--------EE------CCT--TCCCCEEEECTTSC-EEEE-C-B-SEEEEECT
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEE--------eC------CCc--cCCCcCeEECCCCC-EEEe-C-C-CCEEEECC
Confidence 467899999999999999977555432 11 111 01267799999985 6663 3 3 78999987
Q ss_pred ccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeC-CCcEEEEECCCCCcCceeecc------CCCCce
Q 037120 187 GYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDT-HGVVNIWDRRVGVLPSLELST------GSHGTL 259 (489)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~------~h~~~v 259 (489)
.+ +.+-... .+....+.++.+.++|+ ++++.+. ++.|..+|. .++ .+..+. .+....
T Consensus 64 -~G-----~~~W~~~------~~~~~~~~~~~~~~dG~-~lv~~~~~~~~v~~vd~-~Gk--~l~~~~~~~~~~~~~~~~ 127 (276)
T 3no2_A 64 -DG-----RELWNIA------APAGCEMQTARILPDGN-ALVAWCGHPSTILEVNM-KGE--VLSKTEFETGIERPHAQF 127 (276)
T ss_dssp -TS-----CEEEEEE------CCTTCEEEEEEECTTSC-EEEEEESTTEEEEEECT-TSC--EEEEEEECCSCSSGGGSC
T ss_pred -CC-----CEEEEEc------CCCCccccccEECCCCC-EEEEecCCCCEEEEEeC-CCC--EEEEEeccCCCCcccccc
Confidence 22 2221111 11224678899999999 8888776 777877875 444 221211 122345
Q ss_pred eEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeec
Q 037120 260 NSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHN 296 (489)
Q Consensus 260 ~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~ 296 (489)
..+++.++|+++++...++.|..||.. |+.+..+..
T Consensus 128 ~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~ 163 (276)
T 3no2_A 128 RQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKL 163 (276)
T ss_dssp SCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEEC
T ss_pred cCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEEC
Confidence 567789999999998889999999987 877666554
No 194
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.18 E-value=1.4e-09 Score=113.27 Aligned_cols=104 Identities=11% Similarity=0.060 Sum_probs=71.8
Q ss_pred CCcccCeeEEEEecCCCcEEE-----EEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCe---
Q 037120 208 SDVQKGLSDLAFSAVNTSRLI-----ASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGS--- 279 (489)
Q Consensus 208 ~~h~~~v~~~~~~~~~~~~l~-----s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~--- 279 (489)
.+|...+.+++|+|||+ +|+ .|+.+..|++||+.+++........ ......++|+|||+.|+.++.|..
T Consensus 117 ~~~~~~~~~~~~SPDG~-~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~~~~~~~~wspDg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 117 KDGTVSLGTWAVSWDGK-KVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIE--GGKYATPKWTPDSKGFYYEWLPTDPSI 193 (695)
T ss_dssp SSSCEEEEEEEECTTSS-EEEEEEEETTCSCCEEEEEETTTCCBCSSCCBS--CCTTCCCEECTTSSEEEEEECCCCTTS
T ss_pred cCCCEEEEEEEECCCCC-EEEEEECCCCCceEEEEEEECCCCCCcCCcccC--cccccceEEecCCCEEEEEEecCCCCC
Confidence 45666899999999999 666 3334568999999987622010111 111268999999999999988766
Q ss_pred ----------EEEEEcCCCcc----cceeecCCccCCCCeeEEEeCCCCccee
Q 037120 280 ----------IYLWDLRGGRT----SAPFHNHKEVCHLPLTSLKLASMLEKIG 318 (489)
Q Consensus 280 ----------i~lwd~~~~~~----~~~~~~~~~~~~~~v~~l~~~~~~~~i~ 318 (489)
|++|++.++.. +.....+... +.++.|+|||+.++
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~----~~~~~~SpDG~~l~ 242 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTT----FLQSDLSRDGKYLF 242 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTC----EEEEEECTTSCCEE
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecCCCCEE----EEEEEECCCCCEEE
Confidence 99999998763 2222233334 77788888887664
No 195
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.16 E-value=1.8e-07 Score=85.98 Aligned_cols=183 Identities=7% Similarity=-0.066 Sum_probs=118.4
Q ss_pred CCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEe
Q 037120 96 KPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAS 175 (489)
Q Consensus 96 ~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~ 175 (489)
...+.+++++++|+++++...++.|.+||.. ....... . ..+... +.++++.+++. ++++..
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~-------~------~~~~~~---~~~i~~~~~g~-l~v~~~ 80 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFE-------V------PTPDAK---VMCLIVSSLGD-IWFTEN 80 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE-------C------SSTTCC---EEEEEECTTSC-EEEEET
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEE-------C------CCCCCc---ceeEEECCCCC-EEEEec
Confidence 4568899999999988887788999999987 2222100 0 001112 78899998875 666655
Q ss_pred cCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCC
Q 037120 176 TRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGS 255 (489)
Q Consensus 176 ~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h 255 (489)
.+ +.|..||.. + .. . .+ ........+.++++.+++. ++++...++.|..||.. ++.... .....
T Consensus 81 ~~-~~v~~~d~~-g-----~~-~---~~--~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~-~~~~~ 144 (300)
T 2qc5_A 81 GA-NKIGKLSKK-G-----GF-T---EY--PLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTIYEY-DLPNK 144 (300)
T ss_dssp TT-TEEEEECTT-S-----CE-E---EE--ECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCEEEE-ECSST
T ss_pred CC-CeEEEECCC-C-----Ce-E---Ee--cCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCEEEc-cCCCC
Confidence 45 899999873 1 11 1 01 0122335788999999888 77777778899999987 542211 12223
Q ss_pred CCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceee--cCCccCCCCeeEEEeCCCCccee
Q 037120 256 HGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFH--NHKEVCHLPLTSLKLASMLEKIG 318 (489)
Q Consensus 256 ~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~--~~~~~~~~~v~~l~~~~~~~~i~ 318 (489)
...+..+++++++++.++...++.|..||. +++.. .+. ..... +..++++++|....
T Consensus 145 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~----~~~i~~d~~g~l~v 203 (300)
T 2qc5_A 145 GSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE-EYPLPTNAAA----PVGITSGNDGALWF 203 (300)
T ss_dssp TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSSTTCC----EEEEEECTTSSEEE
T ss_pred CCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE-EeeCCCCCCC----cceEEECCCCCEEE
Confidence 456889999999996666555889999998 54432 222 12222 66777777765443
No 196
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.14 E-value=1.1e-08 Score=95.95 Aligned_cols=183 Identities=8% Similarity=-0.043 Sum_probs=112.5
Q ss_pred eeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCC
Q 037120 99 ISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRS 178 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~ 178 (489)
...+.++ ++.++++...++.|.+||..+.+.... + + .... ...+++++++ .++++...+
T Consensus 46 ~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~--------i-~------~~~~---p~~i~~~~~g-~lyv~~~~~- 104 (328)
T 3dsm_A 46 AQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGR--------I-T------GFTS---PRYIHFLSDE-KAYVTQIWD- 104 (328)
T ss_dssp EEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEE--------E-E------CCSS---EEEEEEEETT-EEEEEEBSC-
T ss_pred ceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEE--------c-C------CCCC---CcEEEEeCCC-eEEEEECCC-
Confidence 5667774 456666677789999999998554331 1 0 1112 6779998887 466666455
Q ss_pred CEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe-CCCcEEEEECCCCCcCceeeccCCCC
Q 037120 179 NVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD-THGVVNIWDRRVGVLPSLELSTGSHG 257 (489)
Q Consensus 179 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~h~~ 257 (489)
+.|.+||.... ........- ...++......+++ .++. ++++.. .++.|.++|..+++ ....+.. ..
T Consensus 105 ~~v~~iD~~t~-----~~~~~i~~g--~~~~~~~~p~~i~~-~~~~-lyv~~~~~~~~v~viD~~t~~--~~~~i~~-g~ 172 (328)
T 3dsm_A 105 YRIFIINPKTY-----EITGYIECP--DMDMESGSTEQMVQ-YGKY-VYVNCWSYQNRILKIDTETDK--VVDELTI-GI 172 (328)
T ss_dssp SEEEEEETTTT-----EEEEEEECT--TCCTTTCBCCCEEE-ETTE-EEEEECTTCCEEEEEETTTTE--EEEEEEC-SS
T ss_pred CeEEEEECCCC-----eEEEEEEcC--CccccCCCcceEEE-ECCE-EEEEcCCCCCEEEEEECCCCe--EEEEEEc-CC
Confidence 99999998432 222211100 00111224556777 3333 455443 48999999999876 3333322 23
Q ss_pred ceeEEEEeecCCEEEEEeCC----------CeEEEEEcCCCcccceeecCC-ccCCCCeeEEEeCCCCccee
Q 037120 258 TLNSIQLHAENQIIFAAGKH----------GSIYLWDLRGGRTSAPFHNHK-EVCHLPLTSLKLASMLEKIG 318 (489)
Q Consensus 258 ~v~~~~~~p~~~~l~~~~~d----------g~i~lwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~i~ 318 (489)
....++++|+|++++++..+ +.|.+||..+++....+.... .. ...++|+|+++.+.
T Consensus 173 ~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~----p~~la~~~d~~~ly 240 (328)
T 3dsm_A 173 QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDW----PSEVQLNGTRDTLY 240 (328)
T ss_dssp CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCC----CEEEEECTTSCEEE
T ss_pred CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCC----ceeEEEecCCCEEE
Confidence 45688999999876666544 799999999887665554221 12 56777777665543
No 197
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.14 E-value=4.7e-09 Score=96.94 Aligned_cols=138 Identities=8% Similarity=-0.014 Sum_probs=89.5
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEE
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVN 237 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~ 237 (489)
..+++|+|++..+++++..+ +.|..||.... . ..+ ..+...+.++++++++. ++++...++.|.
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~-~~i~~~~~~~~-------~---~~~----~~~~~~~~~l~~~~dg~-l~v~~~~~~~i~ 93 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQ-NRTWAWSDDGQ-------L---SPE----MHPSHHQNGHCLNKQGH-LIACSHGLRRLE 93 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGG-TEEEEEETTSC-------E---EEE----ESSCSSEEEEEECTTCC-EEEEETTTTEEE
T ss_pred ccCCeEeCCCCEEEEEeCCC-CEEEEEECCCC-------e---EEE----ECCCCCcceeeECCCCc-EEEEecCCCeEE
Confidence 67799999986678888777 99999998321 1 111 23456789999999998 777777778999
Q ss_pred EEECCCCCcCceee-cc-CCCCceeEEEEeecCCEEEEEeC-----------------CCeEEEEEcCCCcccceeecCC
Q 037120 238 IWDRRVGVLPSLEL-ST-GSHGTLNSIQLHAENQIIFAAGK-----------------HGSIYLWDLRGGRTSAPFHNHK 298 (489)
Q Consensus 238 iwd~~~~~~~~~~~-~~-~h~~~v~~~~~~p~~~~l~~~~~-----------------dg~i~lwd~~~~~~~~~~~~~~ 298 (489)
+||..+++...+.. .. .....++.++++|+|+++++.+. .+.|..+|.. ++ +..+..+.
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~ 171 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDR 171 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCC
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCC
Confidence 99998776221110 01 11234678999999998776321 2455555554 33 33333333
Q ss_pred ccCCCCeeEEEeCCCCcce
Q 037120 299 EVCHLPLTSLKLASMLEKI 317 (489)
Q Consensus 299 ~~~~~~v~~l~~~~~~~~i 317 (489)
.. ...++|+|+++.+
T Consensus 172 ~~----~~gi~~s~dg~~l 186 (296)
T 3e5z_A 172 VK----PNGLAFLPSGNLL 186 (296)
T ss_dssp SS----EEEEEECTTSCEE
T ss_pred CC----CccEEECCCCCEE
Confidence 33 5667777776654
No 198
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.12 E-value=4.5e-08 Score=94.65 Aligned_cols=162 Identities=10% Similarity=0.024 Sum_probs=100.6
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
.....|+|+++|+++++...++.|++||..+...... ... .. ... ++|++++. .|+.+..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~---------~~~-------~~--~~~-ia~~~~g~-~l~~~d~ 190 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTV---------HPG-------FK--GGK-PAVTKDKQ-RVYSIGW 190 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEE---------EET-------CC--BCB-CEECTTSS-EEEEEBS
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEe---------ecc-------CC--CCc-eeEecCCC-cEEEEec
Confidence 3578999999999888888889999999987433321 000 11 033 89999986 5555554
Q ss_pred CCC-EEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceee--cc
Q 037120 177 RSN-VVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLEL--ST 253 (489)
Q Consensus 177 d~g-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~ 253 (489)
+.+ .|.+||...... ...+.. . .......+.+++++|++. .|+.+..++.|+.||..++....+.. ..
T Consensus 191 ~~~~~I~~~d~~~~~~--~~~~g~---~---~~~~~~~p~~iav~p~~g-~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~ 261 (409)
T 3hrp_A 191 EGTHTVYVYMKASGWA--PTRIGQ---L---GSTFSGKIGAVALDETEE-WLYFVDSNKNFGRFNVKTQEVTLIKQLELS 261 (409)
T ss_dssp STTCEEEEEEGGGTTC--EEEEEE---C---CTTSCSCCCBCEECTTSS-EEEEECTTCEEEEEETTTCCEEEEEECCCC
T ss_pred CCCceEEEEEcCCCce--eEEeee---c---cchhcCCcEEEEEeCCCC-eEEEEECCCcEEEEECCCCCEEEEeccccc
Confidence 413 888888743211 011100 0 011335678899999655 45557778899999998765221100 11
Q ss_pred CCCCce--eEEEEeecCCEEEEE-eCCCeEEEEEcCC
Q 037120 254 GSHGTL--NSIQLHAENQIIFAA-GKHGSIYLWDLRG 287 (489)
Q Consensus 254 ~h~~~v--~~~~~~p~~~~l~~~-~~dg~i~lwd~~~ 287 (489)
++...- +.++|+|++..|+.+ ..++.|+.||...
T Consensus 262 g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g 298 (409)
T 3hrp_A 262 GSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG 298 (409)
T ss_dssp SCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred CCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC
Confidence 222222 389999965555555 4488999998764
No 199
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.12 E-value=7.4e-09 Score=98.14 Aligned_cols=115 Identities=11% Similarity=0.117 Sum_probs=79.6
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCC----CCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCC
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYIS----DEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTH 233 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~d 233 (489)
+..+++++... ++++|+.+ .+.+|++.... ... ..+.+... ..+.. |+.++| ++. .|+.+ .+
T Consensus 40 ~nlLais~~~g-ll~a~~~~--~l~v~~~~~l~~~~~~~~-~~~~~~~~-----~~lp~-V~~l~f--d~~-~L~v~-~~ 105 (388)
T 1xip_A 40 LQNLDISNSKS-LFVAASGS--KAVVGELQLLRDHITSDS-TPLTFKWE-----KEIPD-VIFVCF--HGD-QVLVS-TR 105 (388)
T ss_dssp CBCEEEETTTT-EEEEEETT--EEEEEEHHHHHHHHHSSS-CCCCCSEE-----EECTT-EEEEEE--ETT-EEEEE-ES
T ss_pred ccEEEEcCCCC-EEEEeCCC--EEEEEEhhHhhhhhcccc-ccccceEE-----eeCCC-eeEEEE--CCC-EEEEE-cC
Confidence 77799999875 78888844 77789984221 000 00111111 23455 999999 777 78877 88
Q ss_pred CcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcc
Q 037120 234 GVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRT 290 (489)
Q Consensus 234 g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~ 290 (489)
+.|++||+++.. .......|+..+.++.+.+. .+++++.||.|.+||+.++..
T Consensus 106 ~~l~v~dv~sl~--~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~ 158 (388)
T 1xip_A 106 NALYSLDLEELS--EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST 158 (388)
T ss_dssp SEEEEEESSSTT--CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE
T ss_pred CcEEEEEchhhh--ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcc
Confidence 999999998765 23334466777887776554 388888999999999997654
No 200
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.08 E-value=1.4e-08 Score=92.22 Aligned_cols=158 Identities=8% Similarity=-0.035 Sum_probs=106.8
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
..+.+++++++|+++++.. ++.|.+||.......... ..... .+..+++.+++. ++++...
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~--------------~~~~~---~p~~i~~~~~g~-l~v~~~~ 127 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP--------------FDGLN---YPEGLAVDTQGA-VYVADRG 127 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC--------------CCSCS---SEEEEEECTTCC-EEEEEGG
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee--------------cCCcC---CCcceEECCCCC-EEEEECC
Confidence 3578899999999777666 889999998763222100 00111 277899999875 7776665
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCC
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSH 256 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~ 256 (489)
+ +.|.+|+.... . .... .......+.++++.+++. ++++...++.|.+||..... .......+.
T Consensus 128 ~-~~i~~~~~~~~--~--~~~~--------~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~--~~~~~~~~~ 191 (270)
T 1rwi_B 128 N-NRVVKLAAGSK--T--QTVL--------PFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNN--QVVLPFTDI 191 (270)
T ss_dssp G-TEEEEECTTCC--S--CEEC--------CCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECTTTCC--EEECCCSSC
T ss_pred C-CEEEEEECCCc--e--eEee--------ccccCCCceeEEEeCCCC-EEEEECCCCEEEEEecCCCc--eEeecccCC
Confidence 5 89999975221 1 1100 012233678899999998 88877778999999987654 222222333
Q ss_pred CceeEEEEeecCCEEEEEeCCCeEEEEEcCCCc
Q 037120 257 GTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGR 289 (489)
Q Consensus 257 ~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~ 289 (489)
..+..++++++|.+.++...++.|.+||.....
T Consensus 192 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 192 TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp CSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred CCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 668899999999766666668899999987543
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.08 E-value=3.9e-08 Score=90.80 Aligned_cols=154 Identities=10% Similarity=-0.038 Sum_probs=93.7
Q ss_pred eeEEEECCC-CcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecC
Q 037120 99 ISALDFDCK-GIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTR 177 (489)
Q Consensus 99 V~~~~fs~~-g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d 177 (489)
--+..|+++ +.++++...++.|..||..+...... ..... +.++++++++. ++++ . +
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~----------------~~~~~---~~~i~~~~dG~-l~v~-~-~ 72 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV----------------TMDAP---VSSVALRQSGG-YVAT-I-G 72 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE----------------ECSSC---EEEEEEBTTSS-EEEE-E-T
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE----------------eCCCc---eEEEEECCCCC-EEEE-E-C
Confidence 457789985 56677777789999999987332110 01112 88899999986 5554 3 3
Q ss_pred CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCC---------CcEEEEECCCCCcCc
Q 037120 178 SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTH---------GVVNIWDRRVGVLPS 248 (489)
Q Consensus 178 ~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~d---------g~i~iwd~~~~~~~~ 248 (489)
+.|.+||...+.. ..+.... .......++++++.|+|. ++++...+ ..-.||.+..... .
T Consensus 73 -~~l~~~d~~~g~~---~~~~~~~-----~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~ 141 (297)
T 3g4e_A 73 -TKFCALNWKEQSA---VVLATVD-----NDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH-V 141 (297)
T ss_dssp -TEEEEEETTTTEE---EEEEECC-----TTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC-E
T ss_pred -CeEEEEECCCCcE---EEEEecC-----CCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC-E
Confidence 6899999843210 1111100 011234588999999998 66654321 2334554443221 1
Q ss_pred eeeccCCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcC
Q 037120 249 LELSTGSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLR 286 (489)
Q Consensus 249 ~~~~~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~ 286 (489)
. ....+....+.++|+|+++.++.+.. ++.|.+||+.
T Consensus 142 ~-~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d 179 (297)
T 3g4e_A 142 K-KYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYD 179 (297)
T ss_dssp E-EEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEEC
T ss_pred E-EEeeccccccceEEcCCCCEEEEecCCCCcEEEEecc
Confidence 1 22223345678999999998766654 8899999974
No 202
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.06 E-value=1.5e-08 Score=105.28 Aligned_cols=164 Identities=12% Similarity=0.099 Sum_probs=101.3
Q ss_pred ceeEEEECCCCcEEEEEe-----cCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEE
Q 037120 98 GISALDFDCKGIYLVSAT-----RSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVA 172 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~-----~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~ 172 (489)
.+..++|||||++||-+. ....|+|||+.+++.... .... .. ...++|+ |++.+++
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-----------~~~~----~k---~~~~~Ws-Dg~~l~y 190 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-----------PLKD----VK---FSGISWL-GNEGFFY 190 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-----------EEEE----EE---SCCCEEE-TTTEEEE
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-----------ccCC----ce---eccEEEe-CCCEEEE
Confidence 488999999999998543 335799999998543321 0111 00 1348999 9876665
Q ss_pred EEecC-----------CCEEEEEEeccCCCCCceeeeeceeeeeecCC-cccCeeEEEEecCCCcEEEEEeC---CCcEE
Q 037120 173 CASTR-----------SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSD-VQKGLSDLAFSAVNTSRLIASDT---HGVVN 237 (489)
Q Consensus 173 s~~~d-----------~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~s~---dg~i~ 237 (489)
+...+ ...|++|++......... +..... |...+.++.|+|+++.++++.+. +..|+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~--------v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~ 262 (693)
T 3iuj_A 191 SSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRL--------VFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLY 262 (693)
T ss_dssp EESSCCC-------CCCCEEEEEETTSCGGGCEE--------EESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEE
T ss_pred EEecCcccccccccCCCcEEEEEECCCCcccceE--------EEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEE
Confidence 55421 135999998543222111 111133 45567889999999944455542 35899
Q ss_pred EEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeC-C---CeEEEEEcCCCcc
Q 037120 238 IWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGK-H---GSIYLWDLRGGRT 290 (489)
Q Consensus 238 iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~-d---g~i~lwd~~~~~~ 290 (489)
++|+.++..... .+..+....... ++++|..++..+. + +.|..+|+.++..
T Consensus 263 ~~d~~~~~~~~~-~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~ 317 (693)
T 3iuj_A 263 VKDLSQENAPLL-TVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP 317 (693)
T ss_dssp EEETTSTTCCCE-EEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred EEECCCCCCceE-EEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence 999987642222 334455555554 6777776665554 3 6799999887643
No 203
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.04 E-value=1.8e-07 Score=89.15 Aligned_cols=261 Identities=13% Similarity=-0.000 Sum_probs=148.9
Q ss_pred EEEECCCCcEEEEEe----------cCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 101 ALDFDCKGIYLVSAT----------RSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 101 ~~~fs~~g~~la~g~----------~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
.++|+|||++|.++. .++.|.+||..+.+.....+ ........ +... -..++|+|+++.+
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~------~~~~~~~~-~g~~---p~~~~~spDG~~l 139 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIE------LPDAPRFD-VGPY---SWMNANTPNNADL 139 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEE------CCCccccc-cCCC---ccceEECCCCCEE
Confidence 889999999998886 36789999998754443210 00000000 0011 2349999999866
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeee-ceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCce
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKT-RRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSL 249 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 249 (489)
+++....++.|.++| .... .+.. ... . .++.+.|+++..+++.+.||.+.++|. +++. .
T Consensus 140 ~v~n~~~~~~v~viD-~t~~-----~~~~~i~~-----~------~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~--~ 199 (373)
T 2mad_H 140 LFFQFAAGPAVGLVV-QGGS-----SDDQLLSS-----P------TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGA--A 199 (373)
T ss_pred EEEecCCCCeEEEEE-CCCC-----EEeEEcCC-----C------ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcE--E
Confidence 665533237899999 6442 2211 110 1 124566777667788889999999999 6652 2
Q ss_pred eecc-----CCCCc-eeEEEEeecCCEEEEEeCCCeEEEEEcCCCcc--cceeecCCccCCCCeeEEEeCCCCcceeecc
Q 037120 250 ELST-----GSHGT-LNSIQLHAENQIIFAAGKHGSIYLWDLRGGRT--SAPFHNHKEVCHLPLTSLKLASMLEKIGTLK 321 (489)
Q Consensus 250 ~~~~-----~h~~~-v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~--~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~ 321 (489)
.... ....+ .....+.+++..++..+..+.+.+.|+.+... +..+...... .....|.|.+.
T Consensus 200 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~----~~~~~~~p~g~------ 269 (373)
T 2mad_H 200 GAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGG----RKADTWRPGGW------ 269 (373)
T ss_pred EEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCc----ccccceecCce------
Confidence 1110 11112 12355677766656556788999999976432 2222211111 11222333321
Q ss_pred ccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEe
Q 037120 322 AQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVG 401 (489)
Q Consensus 322 ~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 401 (489)
..+.++|++.++++...... .+..
T Consensus 270 ----------~~~~~s~d~~~lyV~~~~~~--------------------~~~~-------------------------- 293 (373)
T 2mad_H 270 ----------QQVAYLKSSDGIYLLTSEQS--------------------AWKL-------------------------- 293 (373)
T ss_pred ----------EeEEECCCCCEEEEEeccCC--------------------cccc--------------------------
Confidence 22345555554433221100 0000
Q ss_pred ecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCC-eEEecc-CcceeEEEeccc
Q 037120 402 SSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNN-TIVAGT-KNSSLLVVSQKQ 479 (489)
Q Consensus 402 gs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~-~i~sgs-~dg~i~v~~~~~ 479 (489)
...++.|.++|..+. +.+..+. ......+++|+|+++ .++++. .++.|.||..+.
T Consensus 294 ~~~~~~V~VID~~t~----------~vv~~i~-------------~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 294 HAAAKEVTSVTGLVG----------QTSSQIS-------------LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred cCCCCeEEEEECCCC----------EEEEEEE-------------CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 002457999999888 6666554 233578999999998 777776 589999997654
Q ss_pred c
Q 037120 480 Q 480 (489)
Q Consensus 480 ~ 480 (489)
.
T Consensus 351 ~ 351 (373)
T 2mad_H 351 G 351 (373)
T ss_pred C
Confidence 3
No 204
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.04 E-value=2.4e-08 Score=91.07 Aligned_cols=186 Identities=10% Similarity=0.053 Sum_probs=126.1
Q ss_pred EEEEEeCCCcEEEEECCCCCcCceeeccCCC-CceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCC-ccCCC
Q 037120 226 RLIASDTHGVVNIWDRRVGVLPSLELSTGSH-GTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHK-EVCHL 303 (489)
Q Consensus 226 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~-~~~~~ 303 (489)
+|++++.|+.|.+||..+++ .+-.+..+. ..+.++.+.|+|++++ +.++.|+.||. +++.+..+.... ..
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~--~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~--- 78 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKE--IVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCE--- 78 (276)
T ss_dssp EEEECTTCSEEEEEETTTTE--EEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCE---
T ss_pred EEEeeCCCCEEEEEECCCCe--EEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcc---
Confidence 89999999999999998887 443444443 4688999999999887 45788999999 888888887642 23
Q ss_pred CeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccc
Q 037120 304 PLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQ 383 (489)
Q Consensus 304 ~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (489)
+.++.+.++|..+..... ....-+.++++++.+-.+..+.. ....+
T Consensus 79 -~~~~~~~~dG~~lv~~~~------~~~~v~~vd~~Gk~l~~~~~~~~-----------~~~~~---------------- 124 (276)
T 3no2_A 79 -MQTARILPDGNALVAWCG------HPSTILEVNMKGEVLSKTEFETG-----------IERPH---------------- 124 (276)
T ss_dssp -EEEEEECTTSCEEEEEES------TTEEEEEECTTSCEEEEEEECCS-----------CSSGG----------------
T ss_pred -ccccEECCCCCEEEEecC------CCCEEEEEeCCCCEEEEEeccCC-----------CCccc----------------
Confidence 888899999988764211 01123456677665433322110 00000
Q ss_pred cCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeE
Q 037120 384 LHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTI 463 (489)
Q Consensus 384 ~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i 463 (489)
...+.++..++ +.++++.+.++.|.+||.. + +.+..+. . ...+.++.+.|+++.+
T Consensus 125 ~~~~~v~~~~~-G~~lv~~~~~~~v~~~d~~-G----------~~~w~~~------------~-~~~~~~~~~~~~g~~~ 179 (276)
T 3no2_A 125 AQFRQINKNKK-GNYLVPLFATSEVREIAPN-G----------QLLNSVK------------L-SGTPFSSAFLDNGDCL 179 (276)
T ss_dssp GSCSCCEECTT-SCEEEEETTTTEEEEECTT-S----------CEEEEEE------------C-SSCCCEEEECTTSCEE
T ss_pred ccccCceECCC-CCEEEEecCCCEEEEECCC-C----------CEEEEEE------------C-CCCccceeEcCCCCEE
Confidence 00112233333 5677888899999999988 7 6665554 2 2345678888999999
Q ss_pred EeccCcceeEEEecc
Q 037120 464 VAGTKNSSLLVVSQK 478 (489)
Q Consensus 464 ~sgs~dg~i~v~~~~ 478 (489)
++++.++.|..+..+
T Consensus 180 v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 180 VACGDAHCFVQLNLE 194 (276)
T ss_dssp EECBTTSEEEEECTT
T ss_pred EEeCCCCeEEEEeCc
Confidence 999988888887665
No 205
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.00 E-value=1.3e-07 Score=88.59 Aligned_cols=151 Identities=11% Similarity=-0.067 Sum_probs=93.6
Q ss_pred eeEEEECCC-CcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecC
Q 037120 99 ISALDFDCK-GIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTR 177 (489)
Q Consensus 99 V~~~~fs~~-g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d 177 (489)
..+.+|+|+ +.+++++..++.|.+||..+..... . .... .+.+++|++++. ++++ ..
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~---------~-------~~~~---~v~~i~~~~dg~-l~v~-~~- 108 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTV---------H-------ALPF---MGSALAKISDSK-QLIA-SD- 108 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE---------E-------ECSS---CEEEEEEEETTE-EEEE-ET-
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE---------E-------ECCC---cceEEEEeCCCe-EEEE-EC-
Confidence 457789997 5566777778999999988733221 0 0111 288899999975 5544 32
Q ss_pred CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeC------CCcEEEEECCCCCcCceee
Q 037120 178 SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDT------HGVVNIWDRRVGVLPSLEL 251 (489)
Q Consensus 178 ~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~ 251 (489)
..|.+||...+. . ..+.... .......++++++.|+|. ++++... .+.|..+| +++ +..
T Consensus 109 -~gl~~~d~~~g~--~-~~~~~~~-----~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~---~~~ 173 (326)
T 2ghs_A 109 -DGLFLRDTATGV--L-TLHAELE-----SDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGK---VTK 173 (326)
T ss_dssp -TEEEEEETTTCC--E-EEEECSS-----TTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTE---EEE
T ss_pred -CCEEEEECCCCc--E-EEEeeCC-----CCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCc---EEE
Confidence 459999974321 0 1111100 011124688999999998 6655432 24566666 333 212
Q ss_pred ccCCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcC
Q 037120 252 STGSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLR 286 (489)
Q Consensus 252 ~~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~ 286 (489)
+..+....+.++|+|+++.++.+.. ++.|.+||+.
T Consensus 174 ~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 174 LFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred eeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 2222345678999999998766654 7899999986
No 206
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.95 E-value=1.2e-07 Score=89.45 Aligned_cols=278 Identities=6% Similarity=-0.041 Sum_probs=152.6
Q ss_pred eeEEEeeCCCCCEEEEEec-CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeC----
Q 037120 158 LDAVRWNLANQDEVACAST-RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDT---- 232 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~-d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~---- 232 (489)
...+++++++. ++++... +++.++||.+.. . . +.+.........+|...+..+++.+++. ++++-..
T Consensus 19 p~~va~~~~g~-~~v~~~~~~~~~~~l~~~~~---g--~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~ 90 (343)
T 2qe8_A 19 PGNITLTPDGR-LFLSLHQFYQPEMQVAELTQ---D--G-LIPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSK 90 (343)
T ss_dssp EEEEEECTTSC-EEEEECGGGCCSCSEEEEET---T--E-EEESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHT
T ss_pred cceEEECCCCC-EEEEeCCCCCCceEEEEECC---C--C-eecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcC
Confidence 77899999985 6766531 114377777741 1 1 1111100011245667899999999987 5554433
Q ss_pred -CCcEEEEECCCCCcCceeecc------CCCCceeEEEEeecCCEEEEE-e---CCCeEEEEEcCCCcccceeecCCccC
Q 037120 233 -HGVVNIWDRRVGVLPSLELST------GSHGTLNSIQLHAENQIIFAA-G---KHGSIYLWDLRGGRTSAPFHNHKEVC 301 (489)
Q Consensus 233 -dg~i~iwd~~~~~~~~~~~~~------~h~~~v~~~~~~p~~~~l~~~-~---~dg~i~lwd~~~~~~~~~~~~~~~~~ 301 (489)
++.|.+||+.+++ .++.+. .+...+..++++|++..++.+ . .++.|.+||+.+++....+..|....
T Consensus 91 ~~~~i~~~d~~tg~--~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~ 168 (343)
T 2qe8_A 91 SVPKLVAWDTLNNQ--LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIA 168 (343)
T ss_dssp SCCEEEEEETTTTE--EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTS
T ss_pred CCCeEEEEECCCCe--EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccc
Confidence 5789999998876 222221 223456899999876555544 4 57899999999887655554432220
Q ss_pred CCCeeEEEeCCCCcceeecccccee--eccceeEEEeCCCCCeEEEEEecCCceEEEEee---cccee--eecCCCCCCc
Q 037120 302 HLPLTSLKLASMLEKIGTLKAQSKI--VSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVY---NSRVS--HVHCPPPAWL 374 (489)
Q Consensus 302 ~~~v~~l~~~~~~~~i~~~~~~~~~--~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~---~~~~~--~~~~~~~~~~ 374 (489)
..+ ..+.++|..+......... ....+..++++|+++.++.....+...-.++.. .+... .+.. .+.
T Consensus 169 ~~~---~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~ 242 (343)
T 2qe8_A 169 PED---IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGS---KIE 242 (343)
T ss_dssp CCS---CCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHT---TCE
T ss_pred ccc---cceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhc---ceE
Confidence 001 2233344333211111000 112457899999998888776655411111110 00000 0000 000
Q ss_pred CCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEE
Q 037120 375 SDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTAC 454 (489)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v 454 (489)
.. ...-....+++.++ +.+.++...++.|.+||..++ +...... .++...+.++
T Consensus 243 ~~----g~~g~pdgia~d~~-G~l~va~~~~~~V~~~d~~~G----------~~~~~~~-----------~~~~~~p~~v 296 (343)
T 2qe8_A 243 RY----SEKPICDGISIDKD-HNIYVGDLAHSAIGVITSADR----------AYKLLVT-----------DEKLSWTDSF 296 (343)
T ss_dssp EE----EECCSCSCEEECTT-CCEEEEEGGGTEEEEEETTTT----------EEEEEEE-----------CGGGSCEEEE
T ss_pred ec----ccCCCCceEEECCC-CCEEEEccCCCeEEEEECCCC----------CEEEEEE-----------CCceecCCee
Confidence 00 00001233556666 456667788899999998445 2211111 0223458999
Q ss_pred EeeCCCCeEEeccCcceeEEEec
Q 037120 455 VTHPLNNTIVAGTKNSSLLVVSQ 477 (489)
Q Consensus 455 a~~p~~~~i~sgs~dg~i~v~~~ 477 (489)
+|.|++..+++.+..+.+.+|..
T Consensus 297 a~~~~g~l~v~~~~~~~~~~f~~ 319 (343)
T 2qe8_A 297 NFGSDGYLYFDCNQLHHSAPLNA 319 (343)
T ss_dssp EECTTSCEEEEECCGGGSGGGBT
T ss_pred EECCCCcEEEEeCcccccccccc
Confidence 99999988888877776655543
No 207
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.92 E-value=3.8e-06 Score=77.01 Aligned_cols=237 Identities=9% Similarity=-0.009 Sum_probs=138.4
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEE
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVN 237 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~ 237 (489)
+.++++.+++. ++++...+ +.|.+||.. . . . . .+. ...+...+.++++.+++. ++++...++.|.
T Consensus 17 ~~~i~~d~~g~-l~v~~~~~-~~v~~~d~~-~--~---~-~---~~~--~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~ 81 (299)
T 2z2n_A 17 PYGITVSDKGK-VWITQHKA-NMISCINLD-G--K---I-T---EYP--LPTPDAKVMCLTISSDGE-VWFTENAANKIG 81 (299)
T ss_dssp EEEEEECTTSC-EEEEETTT-TEEEEECTT-C--C---E-E---EEE--CSSTTCCEEEEEECTTSC-EEEEETTTTEEE
T ss_pred ccceEECCCCC-EEEEecCC-CcEEEEcCC-C--C---e-E---Eec--CCcccCceeeEEECCCCC-EEEeCCCCCeEE
Confidence 88899999985 66655545 899999983 1 1 1 1 110 122345789999999988 777777788999
Q ss_pred EEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccc-eeecCCccCCCCeeEEEeCCCCcc
Q 037120 238 IWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSA-PFHNHKEVCHLPLTSLKLASMLEK 316 (489)
Q Consensus 238 iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~ 316 (489)
.||.. ++...+ ........+..+++++++.+.++...++.|..||. +++... ........ +..+++.++|..
T Consensus 82 ~~~~~-g~~~~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~----~~~i~~~~~g~l 154 (299)
T 2z2n_A 82 RITKK-GIIKEY-TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSY----PSFITLGSDNAL 154 (299)
T ss_dssp EECTT-SCEEEE-ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCC----EEEEEECTTSCE
T ss_pred EECCC-CcEEEE-eCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCC----CceEEEcCCCCE
Confidence 99976 331111 11123457889999999987777767889999998 544321 11112222 677777777654
Q ss_pred eeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCc
Q 037120 317 IGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNS 396 (489)
Q Consensus 317 i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (489)
...... ...|. .+++++.. ...... ... .....+++.+++.
T Consensus 155 ~v~~~~-----~~~i~--~~~~~g~~---------------------~~~~~~-~~~----------~~~~~i~~~~~g~ 195 (299)
T 2z2n_A 155 WFTENQ-----NNAIG--RITESGDI---------------------TEFKIP-TPA----------SGPVGITKGNDDA 195 (299)
T ss_dssp EEEETT-----TTEEE--EECTTCCE---------------------EEEECS-STT----------CCEEEEEECTTSS
T ss_pred EEEeCC-----CCEEE--EEcCCCcE---------------------EEeeCC-CCC----------CcceeEEECCCCC
Confidence 432100 00111 12222111 100000 000 0011234444544
Q ss_pred EEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEEe
Q 037120 397 IYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVS 476 (489)
Q Consensus 397 ~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~ 476 (489)
+.++...++.|.+||. ++ +.. .+..+ .+...+.+++++|++...++...++.|.+|.
T Consensus 196 -l~v~~~~~~~i~~~~~-~g----------~~~-~~~~~----------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d 252 (299)
T 2z2n_A 196 -LWFVEIIGNKIGRITT-SG----------EIT-EFKIP----------TPNARPHAITAGAGIDLWFTEWGANKIGRLT 252 (299)
T ss_dssp -EEEEETTTTEEEEECT-TC----------CEE-EEECS----------STTCCEEEEEECSTTCEEEEETTTTEEEEEE
T ss_pred -EEEEccCCceEEEECC-CC----------cEE-EEECC----------CCCCCceeEEECCCCCEEEeccCCceEEEEC
Confidence 4555556788999998 55 221 11100 3446789999999999777776778888887
Q ss_pred cc
Q 037120 477 QK 478 (489)
Q Consensus 477 ~~ 478 (489)
.+
T Consensus 253 ~~ 254 (299)
T 2z2n_A 253 SN 254 (299)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 208
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.90 E-value=2.1e-07 Score=85.87 Aligned_cols=189 Identities=11% Similarity=0.062 Sum_probs=119.0
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
..+.+++++++|+++++ . ++.|.+||.++....... .... ......+..++++|++. ++++...
T Consensus 54 ~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~------~~~~-------~~~~~~~~di~~d~dG~-l~~~~~~ 117 (297)
T 3g4e_A 54 APVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLA------TVDN-------DKKNNRFNDGKVDPAGR-YFAGTMA 117 (297)
T ss_dssp SCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEE------ECCT-------TCSSEEEEEEEECTTSC-EEEEEEE
T ss_pred CceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEE------ecCC-------CCCCCCCCCEEECCCCC-EEEecCC
Confidence 45899999999996555 3 567999998874332210 0000 00112277899999986 5554432
Q ss_pred C--------CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECC--CCCc
Q 037120 177 R--------SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRR--VGVL 246 (489)
Q Consensus 177 d--------~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~--~~~~ 246 (489)
. ...-.||.+.... .. ..+ ..+....+.++|+|+++.++++.+.++.|.+||+. ++..
T Consensus 118 ~~~~~~~~~~~~~~l~~~d~~g-~~-~~~----------~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 118 EETAPAVLERHQGALYSLFPDH-HV-KKY----------FDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQI 185 (297)
T ss_dssp CCSBTTBCCTTCEEEEEECTTS-CE-EEE----------EEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCE
T ss_pred cccccccccCCCcEEEEEECCC-CE-EEE----------eeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcc
Confidence 1 0234566653221 10 111 11123567899999998455666678999999973 4431
Q ss_pred C---ceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeC-CCCcce
Q 037120 247 P---SLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLA-SMLEKI 317 (489)
Q Consensus 247 ~---~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~~i 317 (489)
. .+..+..+......++++++|.+.++....+.|..||..+++.+..+..+... +++++|. |+++.+
T Consensus 186 ~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~----~t~~~f~g~d~~~L 256 (297)
T 3g4e_A 186 SNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDK----TTSCCFGGKNYSEM 256 (297)
T ss_dssp EEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSB----EEEEEEESGGGCEE
T ss_pred cCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCC----ceEEEEeCCCCCEE
Confidence 1 11122223456789999999987777777889999999988888777765545 8888887 666544
No 209
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.87 E-value=5.3e-08 Score=102.07 Aligned_cols=141 Identities=10% Similarity=-0.039 Sum_probs=79.8
Q ss_pred eCCCCCEEEEEecCCC--EEEEEEeccC---CCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCC-----
Q 037120 164 NLANQDEVACASTRSN--VVSIYDIGYI---SDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTH----- 233 (489)
Q Consensus 164 ~~~~~~~l~s~~~d~g--~i~vwd~~~~---~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~d----- 233 (489)
.|++..++.+.... + .-.+|-.... .......+.... + -.+|...+..++|+|||+ +|+.++.+
T Consensus 115 ~pdG~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~lld~~~-l---~~~~~~~~~~~~~SPDG~-~la~~~~~~G~e~ 188 (741)
T 1yr2_A 115 QRRGASVFYSWNSG-LMNQSQLLVRPADAPVGTKGRVLLDPNT-W---AKDGATALDAWAASDDGR-LLAYSVQDGGSDW 188 (741)
T ss_dssp EEETTEEEEEEECS-SCSSCEEEEEETTSCTTCCCEEEECGGG-C---C----EEEEEEEECTTSS-EEEEEEEETTCSE
T ss_pred EEECCEEEEEEEcC-CCeEEEEEEEcCCccCCCCCEEEECHHH-h---ccCCCEEEEeEEECCCCC-EEEEEEcCCCCce
Confidence 47887555555433 3 3556655322 222212222111 1 033445788999999999 66665533
Q ss_pred CcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCe--------------EEEEEcCCCccc--ceeec-
Q 037120 234 GVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGS--------------IYLWDLRGGRTS--APFHN- 296 (489)
Q Consensus 234 g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~--------------i~lwd~~~~~~~--~~~~~- 296 (489)
..|++||+.+++ .+.. ..+...+..++|+|| +.|+.++.|+. |++|++.++... ..+..
T Consensus 189 ~~i~v~dl~tg~--~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~ 264 (741)
T 1yr2_A 189 RTVKFVGVADGK--PLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATP 264 (741)
T ss_dssp EEEEEEETTTCC--EEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCT
T ss_pred EEEEEEECCCCC--CCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccC
Confidence 359999999987 3322 111222367899999 98888877543 889998876531 12221
Q ss_pred -CCccCCCCeeEEEeCCCCccee
Q 037120 297 -HKEVCHLPLTSLKLASMLEKIG 318 (489)
Q Consensus 297 -~~~~~~~~v~~l~~~~~~~~i~ 318 (489)
+... +..+.|+|||+.+.
T Consensus 265 ~~~~~----~~~~~~SpDG~~l~ 283 (741)
T 1yr2_A 265 ELPKR----GHGASVSSDGRWVV 283 (741)
T ss_dssp TCTTC----EEEEEECTTSCEEE
T ss_pred CCCeE----EEEEEECCCCCEEE
Confidence 1112 56666666666554
No 210
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.86 E-value=4.3e-07 Score=84.09 Aligned_cols=155 Identities=12% Similarity=0.067 Sum_probs=99.6
Q ss_pred eeEEEECCCCc-EEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecC
Q 037120 99 ISALDFDCKGI-YLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTR 177 (489)
Q Consensus 99 V~~~~fs~~g~-~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d 177 (489)
.....|+|+|+ +++++..++.|..|+.... ... + ..+... +..+++++++. ++++...+
T Consensus 47 ~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~-~~~---------~------~~~~~~---~~gl~~d~dG~-l~v~~~~~ 106 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVGRRVLGWREDGT-VDV---------L------LDATAF---TNGNAVDAQQR-LVHCEHGR 106 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSC-EEE---------E------EESCSC---EEEEEECTTSC-EEEEETTT
T ss_pred ccCCeEeCCCCEEEEEECCCCEEEEEeCCCC-EEE---------E------eCCCCc---cceeeECCCCC-EEEEECCC
Confidence 56788999998 6677778899999987431 111 1 111222 77899999985 66665544
Q ss_pred CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEE----EeC-------------CCcEEEEE
Q 037120 178 SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIA----SDT-------------HGVVNIWD 240 (489)
Q Consensus 178 ~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s----~s~-------------dg~i~iwd 240 (489)
+.|.+||.. + . ...+... . .......++++++.++|. +++| |.. .+.|..||
T Consensus 107 -~~v~~~~~~-g--~-~~~~~~~--~---~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d 175 (305)
T 3dr2_A 107 -RAITRSDAD-G--Q-AHLLVGR--Y---AGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLP 175 (305)
T ss_dssp -TEEEEECTT-S--C-EEEEECE--E---TTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEEC
T ss_pred -CEEEEECCC-C--C-EEEEEec--c---CCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEc
Confidence 789999873 1 1 1111110 0 011123578899999998 7775 331 25688888
Q ss_pred CCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCC------CeEEEEEcCCC
Q 037120 241 RRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKH------GSIYLWDLRGG 288 (489)
Q Consensus 241 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d------g~i~lwd~~~~ 288 (489)
..+++...+ . .....+.++|+|+++.|+.+... +.|++||+..+
T Consensus 176 ~~~g~~~~~--~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 176 PDGSPLQRM--A--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp SSSCCCEEE--E--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred CCCCcEEEE--e--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 766652222 1 23456789999999988887664 68888887653
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.85 E-value=1.3e-06 Score=82.40 Aligned_cols=154 Identities=8% Similarity=-0.109 Sum_probs=97.1
Q ss_pred EEECCCCcEEEEEec-----CCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEe-
Q 037120 102 LDFDCKGIYLVSATR-----SGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAS- 175 (489)
Q Consensus 102 ~~fs~~g~~la~g~~-----dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~- 175 (489)
....|+++.+.+... ++.|.+.|..+.+.... ...... - .++++|+++.++++..
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~----------------I~vG~~--P-~va~spDG~~lyVan~~ 98 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGM----------------IDGGFL--P-NPVVADDGSFIAHASTV 98 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEE----------------EEECSS--C-EEEECTTSSCEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEE----------------EECCCC--C-cEEECCCCCEEEEEccc
Confidence 456799988877765 68999999998554431 111111 1 2999999987777652
Q ss_pred --------cCCCEEEEEEeccCCCCCceeeeeceeeeeecCC----cccCeeEEEEecCCCcEEEEEe--CCCcEEEEEC
Q 037120 176 --------TRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSD----VQKGLSDLAFSAVNTSRLIASD--THGVVNIWDR 241 (489)
Q Consensus 176 --------~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~l~s~s--~dg~i~iwd~ 241 (489)
.+ +.|.+||.... +.+...... .+ ....-..++|+|||+ +++.+. .++.|.++|+
T Consensus 99 ~~r~~~G~~~-~~VsviD~~t~-----~v~~~I~v~----~g~r~~~g~~P~~~a~spDGk-~lyVan~~~~~~VsVID~ 167 (386)
T 3sjl_D 99 FSRIARGERT-DYVEVFDPVTL-----LPTADIELP----DAPRFLVGTYPWMTSLTPDGK-TLLFYQFSPAPAVGVVDL 167 (386)
T ss_dssp EEETTEEEEE-EEEEEECTTTC-----CEEEEEEET----TCCCCCBSCCGGGEEECTTSS-EEEEEECSSSCEEEEEET
T ss_pred ccccccCCCC-CEEEEEECCCC-----eEEEEEECC----CccccccCCCCceEEEcCCCC-EEEEEEcCCCCeEEEEEC
Confidence 23 78999999432 222222110 00 012345689999999 666555 3689999999
Q ss_pred CCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCC-Ccc
Q 037120 242 RVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRG-GRT 290 (489)
Q Consensus 242 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~-~~~ 290 (489)
.+.+ .+..+.-. + . ...+....+.+++.+.||.+.+.++.+ ++.
T Consensus 168 ~t~~--vv~tI~v~-g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 168 EGKA--FKRMLDVP-D-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp TTTE--EEEEEECC-S-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred CCCc--EEEEEECC-C-c-ceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 9876 44444211 1 1 223333455667778899999999976 543
No 212
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.80 E-value=2.7e-07 Score=85.64 Aligned_cols=161 Identities=11% Similarity=0.178 Sum_probs=106.8
Q ss_pred ceeEEEECCCCcEEEEEecC---------------CeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEE
Q 037120 98 GISALDFDCKGIYLVSATRS---------------GCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVR 162 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~d---------------g~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~ 162 (489)
.+.+++++++|+++++...+ +.|..||... .... ... +... ...++
T Consensus 118 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-~~~~---------~~~------~~~~---~~~i~ 178 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG-QMIQ---------VDT------AFQF---PNGIA 178 (314)
T ss_dssp CCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS-CEEE---------EEE------EESS---EEEEE
T ss_pred CCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCC-CEEE---------ecc------CCCC---cceEE
Confidence 48899999999988877655 4566666542 1111 111 1111 56789
Q ss_pred ee----CCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcc-cCeeEEEEecCCCcEEEEEeCCCcEE
Q 037120 163 WN----LANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQ-KGLSDLAFSAVNTSRLIASDTHGVVN 237 (489)
Q Consensus 163 ~~----~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~s~s~dg~i~ 237 (489)
|+ |++..++++...+ +.|.+||+... ..+.... ....+.++. .....+++.++|. ++++...++.|.
T Consensus 179 ~~~~~d~dg~~l~v~~~~~-~~i~~~~~~~~-----g~~~~~~-~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~ 250 (314)
T 1pjx_A 179 VRHMNDGRPYQLIVAETPT-KKLWSYDIKGP-----AKIENKK-VWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIE 250 (314)
T ss_dssp EEECTTSCEEEEEEEETTT-TEEEEEEEEET-----TEEEEEE-EEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEE
T ss_pred EecccCCCCCEEEEEECCC-CeEEEEECCCC-----Cccccce-EEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEE
Confidence 99 9876566666555 89999998411 0111111 111223343 5678899999998 777777789999
Q ss_pred EEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCC
Q 037120 238 IWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRG 287 (489)
Q Consensus 238 iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~ 287 (489)
+||..+++ .+..+..+...+.+++|+|+++.|++++. ++.|..||+..
T Consensus 251 ~~d~~~g~--~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 251 VFGPDGGQ--PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EECTTCBS--CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEcCCCCc--EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 99988655 33344455577899999999996666654 78999999875
No 213
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.73 E-value=1.8e-06 Score=81.46 Aligned_cols=162 Identities=12% Similarity=0.060 Sum_probs=94.0
Q ss_pred EEEECCCCcEEEEEe----------cCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 101 ALDFDCKGIYLVSAT----------RSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 101 ~~~fs~~g~~la~g~----------~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
.++++|||++|.+++ .++.|.+||..+.+...... .+.......-.. -..++|+|+++.+
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~-------v~~g~r~~~g~~---P~~~a~spDGk~l 151 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIE-------LPDAPRFLVGTY---PWMTSLTPDGKTL 151 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEE-------ETTCCCCCBSCC---GGGEEECTTSSEE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEE-------CCCccccccCCC---CceEEEcCCCCEE
Confidence 389999999887765 36789999999865544210 000000000012 2339999999866
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCC-CCcCce
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRV-GVLPSL 249 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~-~~~~~~ 249 (489)
+++....++.|.++|+... +++..... .+ . ....|.+...+++.+.||.+.+.++.. ++....
T Consensus 152 yVan~~~~~~VsVID~~t~-----~vv~tI~v-----~g----~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~ 215 (386)
T 3sjl_D 152 LFYQFSPAPAVGVVDLEGK-----AFKRMLDV-----PD----C--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEIT 215 (386)
T ss_dssp EEEECSSSCEEEEEETTTT-----EEEEEEEC-----CS----E--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEE
T ss_pred EEEEcCCCCeEEEEECCCC-----cEEEEEEC-----CC----c--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEe
Confidence 6665432389999999332 34333321 11 1 122355544777888899999999876 332100
Q ss_pred --eeccCCCCcee-EEEEe-ecCCEEEEEeCCCeEEEEEcCCCc
Q 037120 250 --ELSTGSHGTLN-SIQLH-AENQIIFAAGKHGSIYLWDLRGGR 289 (489)
Q Consensus 250 --~~~~~h~~~v~-~~~~~-p~~~~l~~~~~dg~i~lwd~~~~~ 289 (489)
..+..-..++. ...|. ++|++++ .+.+|.|++.|+.+..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 216 HTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGD 258 (386)
T ss_dssp ECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSS
T ss_pred ecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCc
Confidence 01111112222 24664 6776655 5568999999997654
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.73 E-value=1.8e-05 Score=72.46 Aligned_cols=236 Identities=10% Similarity=-0.025 Sum_probs=137.4
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEE
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVN 237 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~ 237 (489)
+.++++.+++. ++++...+ +.|.+||.. . . . .. + .+..+...+.++++.+++. ++++...++.|.
T Consensus 22 p~~i~~d~~g~-l~v~~~~~-~~v~~~~~~-~--~---~-~~---~--~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~v~ 86 (300)
T 2qc5_A 22 PYGITSSEDGK-VWFTQHKA-NKISSLDQS-G--R---I-KE---F--EVPTPDAKVMCLIVSSLGD-IWFTENGANKIG 86 (300)
T ss_dssp EEEEEECTTSC-EEEEETTT-TEEEEECTT-S--C---E-EE---E--ECSSTTCCEEEEEECTTSC-EEEEETTTTEEE
T ss_pred cceeeECCCCC-EEEEcCCC-CeEEEECCC-C--c---e-EE---E--ECCCCCCcceeEEECCCCC-EEEEecCCCeEE
Confidence 78899999875 66666555 899999973 1 1 1 10 1 0122345789999999888 777766688999
Q ss_pred EEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccc-eeecCCccCCCCeeEEEeCCCCcc
Q 037120 238 IWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSA-PFHNHKEVCHLPLTSLKLASMLEK 316 (489)
Q Consensus 238 iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~-~~~~~~~~~~~~v~~l~~~~~~~~ 316 (489)
.||.. ++.... ........+.++++++++.+.++...++.|..||.. ++... .+...... +..+++.+++..
T Consensus 87 ~~d~~-g~~~~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~----~~~i~~d~~g~l 159 (300)
T 2qc5_A 87 KLSKK-GGFTEY-PLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSY----PAFITLGSDNAL 159 (300)
T ss_dssp EECTT-SCEEEE-ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCC----EEEEEECTTSSE
T ss_pred EECCC-CCeEEe-cCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCC----ceeEEECCCCCE
Confidence 99987 542211 111234678899999999877776668899999987 54321 12212223 677777777764
Q ss_pred eeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCc
Q 037120 317 IGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNS 396 (489)
Q Consensus 317 i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (489)
...... ...|. .+++++.... .... . .. .....+++.+++
T Consensus 160 ~v~~~~-----~~~i~--~~~~~g~~~~-~~~~-----------~----------~~----------~~~~~i~~d~~g- 199 (300)
T 2qc5_A 160 WFTENQ-----NNSIG--RITNTGKLEE-YPLP-----------T----------NA----------AAPVGITSGNDG- 199 (300)
T ss_dssp EEEETT-----TTEEE--EECTTCCEEE-EECS-----------S----------TT----------CCEEEEEECTTS-
T ss_pred EEEecC-----CCeEE--EECCCCcEEE-eeCC-----------C----------CC----------CCcceEEECCCC-
Confidence 432110 01111 1222221110 0000 0 00 001123334444
Q ss_pred EEEEeecCCCcEEEEeccCCCCCCeeeccCcccch-hhHhhhhcccCCcccCCCceEEEEeeCCCCeEEeccCcceeEEE
Q 037120 397 IYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIES-LSERTKLKKENRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVV 475 (489)
Q Consensus 397 ~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~ 475 (489)
.+.++....+.|.+||. .+ +.... +. .+...+.+++++|++...++...++.|..|
T Consensus 200 ~l~v~~~~~~~i~~~~~-~g----------~~~~~~~~------------~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 256 (300)
T 2qc5_A 200 ALWFVEIMGNKIGRITT-TG----------EISEYDIP------------TPNARPHAITAGKNSEIWFTEWGANQIGRI 256 (300)
T ss_dssp SEEEEETTTTEEEEECT-TC----------CEEEEECS------------STTCCEEEEEECSTTCEEEEETTTTEEEEE
T ss_pred CEEEEccCCCEEEEEcC-CC----------cEEEEECC------------CCCCCceEEEECCCCCEEEeccCCCeEEEE
Confidence 44455455678999987 33 22111 11 234568899999999877777777888888
Q ss_pred ecc
Q 037120 476 SQK 478 (489)
Q Consensus 476 ~~~ 478 (489)
..+
T Consensus 257 ~~~ 259 (300)
T 2qc5_A 257 TND 259 (300)
T ss_dssp CTT
T ss_pred CCC
Confidence 753
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.70 E-value=2.9e-06 Score=79.27 Aligned_cols=186 Identities=16% Similarity=0.038 Sum_probs=111.4
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
..+.+++|+++|+++++. .+ .|.+||..+....... ... .......+.+++++|++. ++++...
T Consensus 90 ~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~------~~~-------~~~~~~~~~~i~~d~~G~-l~v~~~~ 153 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHA------ELE-------SDLPGNRSNDGRMHPSGA-LWIGTMG 153 (326)
T ss_dssp SCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEE------CSS-------TTCTTEEEEEEEECTTSC-EEEEEEE
T ss_pred CcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEe------eCC-------CCCCCCCCCCEEECCCCC-EEEEeCC
Confidence 468999999999877754 44 4899998764332110 000 000111278899999986 5554432
Q ss_pred C---CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECC--CC-CcC---
Q 037120 177 R---SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRR--VG-VLP--- 247 (489)
Q Consensus 177 d---~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~--~~-~~~--- 247 (489)
+ .+...||.+..+ .. ..+ ..+....+.++|+|+++.++++.+.++.|.+||+. ++ +..
T Consensus 154 ~~~~~~~~~l~~~~~g--~~-~~~----------~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~ 220 (326)
T 2ghs_A 154 RKAETGAGSIYHVAKG--KV-TKL----------FADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAE 220 (326)
T ss_dssp TTCCTTCEEEEEEETT--EE-EEE----------EEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCE
T ss_pred CcCCCCceEEEEEeCC--cE-EEe----------eCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCce
Confidence 1 023445554311 10 111 11123567899999998344555567899999986 44 211
Q ss_pred ceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeC-CCCcc
Q 037120 248 SLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLA-SMLEK 316 (489)
Q Consensus 248 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~~ 316 (489)
.+..+.........++++++|.+.++...++.|.+||. +++.+..+..+... +++++|. +++..
T Consensus 221 ~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~----~~~~af~g~d~~~ 285 (326)
T 2ghs_A 221 VFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQ----TTCPAFIGPDASR 285 (326)
T ss_dssp EEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSB----EEEEEEESTTSCE
T ss_pred EEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCC----cEEEEEecCCCCE
Confidence 12122223456778999999987777666789999998 56655566544434 7777776 55543
No 216
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.69 E-value=4.3e-06 Score=80.33 Aligned_cols=258 Identities=9% Similarity=-0.039 Sum_probs=147.7
Q ss_pred CEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe---------CCCcEEEEECCCCCcCce
Q 037120 179 NVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD---------THGVVNIWDRRVGVLPSL 249 (489)
Q Consensus 179 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s---------~dg~i~iwd~~~~~~~~~ 249 (489)
+.|.++|.. ..+++..... +. .+ .++++||++.++++.. .++.|.++|..+.+ .+
T Consensus 99 ~~VsVID~~-----t~~vv~~I~v------G~-~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~--vv 162 (426)
T 3c75_H 99 TQQFVIDGS-----TGRILGMTDG------GF-LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL--PI 162 (426)
T ss_dssp EEEEEEETT-----TTEEEEEEEE------CS-SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--EE
T ss_pred CeEEEEECC-----CCEEEEEEEC------CC-CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc--EE
Confidence 699999993 2244433331 11 23 7999999994444432 46799999999876 33
Q ss_pred eecc-C------CCCceeEEEEeecCCEEEEEeC--CCeEEEEEcCCCcccceeecCCccC---CCCeeEEEeCCCCcce
Q 037120 250 ELST-G------SHGTLNSIQLHAENQIIFAAGK--HGSIYLWDLRGGRTSAPFHNHKEVC---HLPLTSLKLASMLEKI 317 (489)
Q Consensus 250 ~~~~-~------h~~~v~~~~~~p~~~~l~~~~~--dg~i~lwd~~~~~~~~~~~~~~~~~---~~~v~~l~~~~~~~~i 317 (489)
..+. + .......++|+|+|++++++.. ++.|.+.|+.+++.+..+....... ...-..+.++++|+.+
T Consensus 163 ~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~ 242 (426)
T 3c75_H 163 ADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLA 242 (426)
T ss_dssp EEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEE
T ss_pred EEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEE
Confidence 3322 1 0123457899999999999874 6899999999998877776421100 0001235677888655
Q ss_pred e-eccccceee----------ccc-eeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccc----
Q 037120 318 G-TLKAQSKIV----------SQE-IHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSA---- 381 (489)
Q Consensus 318 ~-~~~~~~~~~----------~~~-i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 381 (489)
. .+ ...+.. ..+ ...+.+.+++..++..... +...+++.......-.. .|........
T Consensus 243 ~V~~-~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~-g~V~ViD~~~~~~~v~~----~~~~~~~~~i~~g~ 316 (426)
T 3c75_H 243 RVDF-ADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYT-GKIFQADLTAEGATFRA----PIEALTEAERADDW 316 (426)
T ss_dssp EEEC-CTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTT-SEEEEEEECSSCEEECC----CEESSCTTTGGGTE
T ss_pred EEEC-CCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCC-CcEEEEeccCCceEEee----eeeecccccccccc
Confidence 2 22 111110 001 1123457777666555433 22234444322211100 1110000000
Q ss_pred cccCCCcceeecCCcEEEEeec---------CCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcccCCcccCCCceE
Q 037120 382 DQLHLRKPSWLSTNSIYAVGSS---------SDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKENRFVPLSEGVT 452 (489)
Q Consensus 382 ~~~~~~~~~~~~~~~~~l~sgs---------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 452 (489)
.-.....+.+.+++..+.++.. .++.|.++|..+. +.+..+. -.....
T Consensus 317 ~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~----------kvv~~I~-------------vg~~P~ 373 (426)
T 3c75_H 317 RPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG----------ERINKIE-------------LGHEID 373 (426)
T ss_dssp EECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC----------CEEEEEE-------------EEEEEC
T ss_pred ccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC----------eEEEEEE-------------CCCCcC
Confidence 0001123567777777666542 1357999999998 7776665 223588
Q ss_pred EEEeeCCCC-eEEecc-CcceeEEEeccccc
Q 037120 453 ACVTHPLNN-TIVAGT-KNSSLLVVSQKQQC 481 (489)
Q Consensus 453 ~va~~p~~~-~i~sgs-~dg~i~v~~~~~~~ 481 (489)
+++|+|+++ .+++.. .++.|.|+.-+...
T Consensus 374 gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 374 SINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp EEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred eEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 999999998 777766 59999998765443
No 217
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.60 E-value=5.2e-06 Score=80.11 Aligned_cols=113 Identities=12% Similarity=0.121 Sum_probs=76.3
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCC--c
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHG--V 235 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg--~ 235 (489)
...|+|++++. ++++...+ +.|++||.... .+..... . ..... ++|++++. .|+.+..++ .
T Consensus 133 P~~la~d~~g~-lyv~d~~~-~~I~~id~~~g-----~~~~~~~------~--~~~~~-ia~~~~g~-~l~~~d~~~~~~ 195 (409)
T 3hrp_A 133 MWGIAAVGNNT-VLAYQRDD-PRVRLISVDDN-----KVTTVHP------G--FKGGK-PAVTKDKQ-RVYSIGWEGTHT 195 (409)
T ss_dssp EEEEEECSTTE-EEEEETTT-TEEEEEETTTT-----EEEEEEE------T--CCBCB-CEECTTSS-EEEEEBSSTTCE
T ss_pred ceEEEEeCCCC-EEEEecCC-CcEEEEECCCC-----EEEEeec------c--CCCCc-eeEecCCC-cEEEEecCCCce
Confidence 67899999875 66666655 89999998322 1111111 1 11233 89999998 788777665 7
Q ss_pred EEEEECCCCCcCceeec----cCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCc
Q 037120 236 VNIWDRRVGVLPSLELS----TGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGR 289 (489)
Q Consensus 236 i~iwd~~~~~~~~~~~~----~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~ 289 (489)
|.+||...+.. .... ......+.+++++|++..|+++..++.|+.||..++.
T Consensus 196 I~~~d~~~~~~--~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~ 251 (409)
T 3hrp_A 196 VYVYMKASGWA--PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE 251 (409)
T ss_dssp EEEEEGGGTTC--EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC
T ss_pred EEEEEcCCCce--eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC
Confidence 99999876542 1122 1144667899999965566666668899999988654
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.59 E-value=2.6e-06 Score=80.22 Aligned_cols=204 Identities=11% Similarity=0.000 Sum_probs=113.3
Q ss_pred CCceeEEEECCCCcEEEEEec-----CCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 96 KPGISALDFDCKGIYLVSATR-----SGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 96 ~~~V~~~~fs~~g~~la~g~~-----dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
...+.+++|+++|+++++-.. ++.|.+||+.+.+.... +........+... +..+++++++..+
T Consensus 66 ~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~--------~~~~~~~~~~~~~---~~~v~vd~~~g~~ 134 (343)
T 2qe8_A 66 FDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRV--------IYLPPPITLSNSF---VNDLAVDLIHNFV 134 (343)
T ss_dssp CSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEE--------EECCTTTSCTTCC---CCEEEEETTTTEE
T ss_pred eeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEE--------EECChhhcccccc---cceEEEecCCCEE
Confidence 346999999999988777654 57899999987553321 0000000011112 5679999875556
Q ss_pred EEEEe---cCCCEEEEEEeccCCCCCceeeee--c-----eeeee---ec-----CC----cccCeeEEEEecCCCcEEE
Q 037120 171 VACAS---TRSNVVSIYDIGYISDEPVEVLKT--R-----RSVTV---VG-----SD----VQKGLSDLAFSAVNTSRLI 228 (489)
Q Consensus 171 l~s~~---~d~g~i~vwd~~~~~~~~~~~~~~--~-----~~~~~---~~-----~~----h~~~v~~~~~~~~~~~~l~ 228 (489)
+++.. .+ +.|.+||+..+.. ...+.. . ..+.. .+ .+ -...++.|+|+|++. .|+
T Consensus 135 yvtd~~~~~~-~~i~v~d~~~g~~--~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~-~ly 210 (343)
T 2qe8_A 135 YISDPAPDDK-AALIRVDLQTGLA--ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENE-WLY 210 (343)
T ss_dssp EEEECCSGGG-CEEEEEETTTCCE--EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSC-EEE
T ss_pred EEEcCccCCC-CeEEEEECCCCCE--EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCC-EEE
Confidence 66655 45 8999999853311 011100 0 00000 00 00 013478999999998 677
Q ss_pred EEeCCC-cEEEEECC---CCCcC---cee--eccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCc
Q 037120 229 ASDTHG-VVNIWDRR---VGVLP---SLE--LSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKE 299 (489)
Q Consensus 229 s~s~dg-~i~iwd~~---~~~~~---~~~--~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~ 299 (489)
.+..++ .+..+|.. .+... ... ...++......++++++|.+.++...++.|.+||..+++. ..+.....
T Consensus 211 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~-~~~~~~~~ 289 (343)
T 2qe8_A 211 LSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAY-KLLVTDEK 289 (343)
T ss_dssp EEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEE-EEEEECGG
T ss_pred EEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCE-EEEEECCc
Confidence 666555 55555532 11100 000 0112344567899999998877777799999999855543 22211110
Q ss_pred cCCCCeeEEEeCCCCcce
Q 037120 300 VCHLPLTSLKLASMLEKI 317 (489)
Q Consensus 300 ~~~~~v~~l~~~~~~~~i 317 (489)
. ...++++|.+++..+
T Consensus 290 ~--~~p~~va~~~~g~l~ 305 (343)
T 2qe8_A 290 L--SWTDSFNFGSDGYLY 305 (343)
T ss_dssp G--SCEEEEEECTTSCEE
T ss_pred e--ecCCeeEECCCCcEE
Confidence 1 115666666665443
No 219
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.56 E-value=6.8e-06 Score=78.96 Aligned_cols=163 Identities=12% Similarity=0.033 Sum_probs=98.1
Q ss_pred EEEECCCCcEEEEEe----------cCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 101 ALDFDCKGIYLVSAT----------RSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 101 ~~~fs~~g~~la~g~----------~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
.++++|||++|.++. .++.|.++|..+.+...... ......+ ..... -..+.|+|+++.+
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~------v~g~~r~-~~g~~---P~~~~~spDGk~l 191 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIE------LPDAPRF-LVGTY---QWMNALTPDNKNL 191 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEE------ETTCCCC-CBSCC---GGGSEECTTSSEE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEE------CCCcccc-ccCCC---cceEEEcCCCCEE
Confidence 789999999887776 46799999999865543210 0000000 00112 2238999999866
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCce-
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSL- 249 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~- 249 (489)
+++...+++.|.+.|+... +++..... . . +....|++...+++.+.||.+.+.|..+++....
T Consensus 192 yV~n~~~~~~VsVID~~t~-----kvv~~I~v-----~----g--~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~ 255 (426)
T 3c75_H 192 LFYQFSPAPAVGVVDLEGK-----TFDRMLDV-----P----D--CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTN 255 (426)
T ss_dssp EEEECSSSCEEEEEETTTT-----EEEEEEEC-----C----S--EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEE
T ss_pred EEEecCCCCeEEEEECCCC-----eEEEEEEc-----C----C--ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEe
Confidence 6665432389999999332 33333221 1 1 1334566655777788889888888854431100
Q ss_pred -eeccCCCCce-eEEEEeecCCEEEEEeCCCeEEEEEcCCCc
Q 037120 250 -ELSTGSHGTL-NSIQLHAENQIIFAAGKHGSIYLWDLRGGR 289 (489)
Q Consensus 250 -~~~~~h~~~v-~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~ 289 (489)
..+.....++ ..+.+.+++..++.....+.|.+.|+....
T Consensus 256 ~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~ 297 (426)
T 3c75_H 256 TEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEG 297 (426)
T ss_dssp CCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSC
T ss_pred eeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCc
Confidence 0111111121 245788999888888888999999997643
No 220
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.56 E-value=2.2e-05 Score=74.64 Aligned_cols=182 Identities=8% Similarity=-0.103 Sum_probs=107.0
Q ss_pred eeEEEECCCCcEEEEEec--CCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 99 ISALDFDCKGIYLVSATR--SGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~--dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
-..++|+|||++|+++.. ++.|.++| .+.+.... . ... -.++.+.|.+...+++.+.
T Consensus 127 p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~--------~---i~~---------~~~~~~~~~~~~~~~~~~~ 185 (373)
T 2mad_H 127 SWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQ--------L---LSS---------PTCYHIHPGAPSTFYLLCA 185 (373)
T ss_pred ccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeE--------E---cCC---------CceEEEEeCCCceEEEEcC
Confidence 457899999999998874 57899999 87543321 0 000 0124556666666777776
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccC--
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTG-- 254 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-- 254 (489)
| |.+.++|. .+... ........+ .+.........+.+++. .++..+.++.+.+.|+.......+..+.-
T Consensus 186 d-g~~~~vd~-~g~~~--~~~~~~~~~----~~~~p~~~~~~~~~~~~-~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~ 256 (373)
T 2mad_H 186 Q-GGLAKTDH-AGGAA--GAGLVGAML----TAAQNLLTQPAQANKSG-RIVWPVYSGKILQADISAAGATNKAPIDALS 256 (373)
T ss_pred C-CCEEEEEC-CCcEE--EEEeccccc----cCCcceeecceeEecCC-EEEEEcCCceEEEEeccCCcceEeeeeeecC
Confidence 6 99999998 43211 111100000 11111123345677766 44444468899999997653222221110
Q ss_pred --------CCCceeEEEEeecCCEEEEEeC----------CCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCc
Q 037120 255 --------SHGTLNSIQLHAENQIIFAAGK----------HGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLE 315 (489)
Q Consensus 255 --------h~~~v~~~~~~p~~~~l~~~~~----------dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 315 (489)
.......+.++|+++.++++.. .+.|.++|+.+++.+..+... .. ...+.|+|||+
T Consensus 257 ~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-~~----p~~i~~s~Dg~ 330 (373)
T 2mad_H 257 GGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-HD----VDAISVAQDGG 330 (373)
T ss_pred CcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-CC----cCeEEECCCCC
Confidence 1123445789999998888753 357999999998877777532 12 45555555554
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.46 E-value=8e-08 Score=91.62 Aligned_cols=145 Identities=9% Similarity=0.014 Sum_probs=70.7
Q ss_pred CCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEEEEEe
Q 037120 107 KGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVSIYDI 186 (489)
Q Consensus 107 ~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~vwd~ 186 (489)
++..+++++.||.|+.||..+++..-. ... .. +.+..+..++. ++++++.| |.|..||.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~--------~~~--------~~---~~s~p~~~~g~-~~v~~s~d-g~l~a~d~ 66 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWT--------LKE--------DP---VLQVPTHVEEP-AFLPDPND-GSLYTLGS 66 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEE--------EEC--------CC---SCCCC-----C-CEEECTTT-CCEEEC--
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEE--------ecC--------CC---ceecceEcCCC-EEEEeCCC-CEEEEEEC
Confidence 567899999999999999988554431 110 11 22233344443 66666666 99999998
Q ss_pred ccCCCCCceeeeeceeeeeecCCcc-cCee-EEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEE
Q 037120 187 GYISDEPVEVLKTRRSVTVVGSDVQ-KGLS-DLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQL 264 (489)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~-~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~ 264 (489)
..+... ..+ ..+. ..+. +..+. .+. .+++++.|+.|+.||.++++. +..+..+. ...+
T Consensus 67 ~tG~~~--w~~----------~~~~~~~~~~sp~~~-~~~-~v~~g~~dg~v~a~D~~tG~~--~w~~~~~~----~~~~ 126 (369)
T 2hz6_A 67 KNNEGL--TKL----------PFTIPELVQASPCRS-SDG-ILYMGKKQDIWYVIDLLTGEK--QQTLSSAF----ADSL 126 (369)
T ss_dssp ---CCS--EEC----------SCCHHHHHTTCSCC-------CCCCEEEEEEEEECCC----------------------
T ss_pred CCCcee--eee----------eccCccccccCceEe-cCC-EEEEEeCCCEEEEEECCCCcE--EEEecCCC----cccc
Confidence 543211 111 0000 0000 00111 234 677788899999999999873 32222222 2455
Q ss_pred eecCCEEEEEeCCCeEEEEEcCCCcccc
Q 037120 265 HAENQIIFAAGKHGSIYLWDLRGGRTSA 292 (489)
Q Consensus 265 ~p~~~~l~~~~~dg~i~lwd~~~~~~~~ 292 (489)
+|++..+++++.|+.|+.||.++|+.+.
T Consensus 127 ~p~~~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 127 SPSTSLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp ------EEEEEEEEEEECCCSSSSSCCC
T ss_pred cccCCEEEEEecCCEEEEEECCCCCEEE
Confidence 6788899999999999999999887543
No 222
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.45 E-value=1e-05 Score=83.87 Aligned_cols=185 Identities=8% Similarity=-0.040 Sum_probs=113.8
Q ss_pred eEEEECCCCcEEEEEecCCe-------------EEEEeCCCcccccCCCCCCCCCccc-ccccccCCCCCCceeEEEeeC
Q 037120 100 SALDFDCKGIYLVSATRSGC-------------LTVHDFESLYYQCNGTLPGVGLKED-QSKHLLHIPLPQQLDAVRWNL 165 (489)
Q Consensus 100 ~~~~fs~~g~~la~g~~dg~-------------i~vwd~~~~~~~~~~~~~~~g~~~~-~~~~~~h~~~~~~V~~v~~~~ 165 (489)
..++|+ ||+.|+.++.+.. |++|++.+........ -.... +..+ +..+.|+|
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v----~~~~~~~~~~---------~~~~~~Sp 243 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLV----FGAIPAQHHR---------YVGATVTE 243 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEE----ESCSGGGCCS---------EEEEEECT
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEE----EecCCCCCeE---------EEEEEEcC
Confidence 577899 9999999988743 8999987743211100 00011 1112 67799999
Q ss_pred CCCCEEEEEecC--CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCC---CcEEEEE
Q 037120 166 ANQDEVACASTR--SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTH---GVVNIWD 240 (489)
Q Consensus 166 ~~~~~l~s~~~d--~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~d---g~i~iwd 240 (489)
+++.++++.+.+ .+.|.++|+....... ..+ ..+....... |.+++..+++....+ +.|..+|
T Consensus 244 Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~-~~l----------~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d 311 (693)
T 3iuj_A 244 DDRFLLISAANSTSGNRLYVKDLSQENAPL-LTV----------QGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVD 311 (693)
T ss_dssp TSCEEEEEEESSSSCCEEEEEETTSTTCCC-EEE----------ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEE
T ss_pred CCCEEEEEEccCCCCcEEEEEECCCCCCce-EEE----------eCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEe
Confidence 998776665522 1589999985432221 111 2233344444 666777355555443 6799999
Q ss_pred CCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeC-CC--eEEEEEcCCCcccceeec-CCccCCCCeeEEEeCCCCcc
Q 037120 241 RRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGK-HG--SIYLWDLRGGRTSAPFHN-HKEVCHLPLTSLKLASMLEK 316 (489)
Q Consensus 241 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~-dg--~i~lwd~~~~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~ 316 (489)
+.++....++.+..|...+. .|+++++.|+.... ++ .|++||+..+. ...+.. .... +..+.+++++..
T Consensus 312 ~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~----~~~~~~~~d~~~ 384 (693)
T 3iuj_A 312 AANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VREVALPGLGS----VSGFNGKHDDPA 384 (693)
T ss_dssp TTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-EEEECCSSSSE----EEECCCCTTCSC
T ss_pred CCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-eEEeecCCCce----EEeeecCCCCCE
Confidence 98875322334455666555 89999998888766 54 68999987543 333332 2233 667777777765
Q ss_pred e
Q 037120 317 I 317 (489)
Q Consensus 317 i 317 (489)
+
T Consensus 385 l 385 (693)
T 3iuj_A 385 L 385 (693)
T ss_dssp E
T ss_pred E
Confidence 5
No 223
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.42 E-value=4.7e-06 Score=78.68 Aligned_cols=256 Identities=9% Similarity=-0.012 Sum_probs=136.4
Q ss_pred EEEECCCCcEEEEEe----------cCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 101 ALDFDCKGIYLVSAT----------RSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 101 ~~~fs~~g~~la~g~----------~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
.++|+|||+++.++. .++.|.+||..+.+...... ......+. ....... ++++|+++.+
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~------v~~~~~~~-~g~~P~~---ia~SpDGk~l 138 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIE------LPDAPRFS-VGPRVHI---IGNCASSACL 138 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEE------ETTSCSCC-BSCCTTS---EEECTTSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEE------CCCccccc-cCCCcce---EEEcCCCCEE
Confidence 689999999888886 37899999999966554210 00000000 0012223 9999999877
Q ss_pred EEEEecCCCEEEE--EEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCC-----
Q 037120 171 VACASTRSNVVSI--YDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRV----- 243 (489)
Q Consensus 171 l~s~~~d~g~i~v--wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~----- 243 (489)
+++...+++.|.+ +|+.. +.... ..+ . ..+.|++...+++.+.||.+.+.|+.+
T Consensus 139 yVan~~~~~~v~V~~iD~~t--------v~~i~-----v~~---~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~ 199 (368)
T 1mda_H 139 LFFLFGSSAAAGLSVPGASD--------DQLTK-----SAS---C---FHIHPGAAATHYLGSCPASLAASDLAAAPAAA 199 (368)
T ss_dssp EEEECSSSCEEEEEETTTEE--------EEEEE-----CSS---C---CCCEEEETTEEECCCCTTSCEEEECCSSCCCC
T ss_pred EEEccCCCCeEEEEEEchhh--------ceEEE-----CCC---c---eEEccCCCeEEEEEcCCCCEEEEECccccccC
Confidence 7765433368888 88832 11111 011 1 123466665677777899988889876
Q ss_pred CCcCce--eeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcc--cceeecCCccCCCCeeEEEeCCCCcceee
Q 037120 244 GVLPSL--ELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRT--SAPFHNHKEVCHLPLTSLKLASMLEKIGT 319 (489)
Q Consensus 244 ~~~~~~--~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~--~~~~~~~~~~~~~~v~~l~~~~~~~~i~~ 319 (489)
++.... ..+.-...+. . .+++..++..+. +.|.+.|+.+... +..+...... ..
T Consensus 200 ~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~---------------~~-- 257 (368)
T 1mda_H 200 GIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESG---------------RK-- 257 (368)
T ss_dssp EECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTH---------------HH--
T ss_pred CeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccc---------------cc--
Confidence 221000 0011112233 3 666777666666 9999999865321 2222110000 00
Q ss_pred ccccceeeccceeEEEeCCCCCeEEEEEe-c-C------CceEEEEeeccceeeecCCCCCCcCCCCccccccCCCccee
Q 037120 320 LKAQSKIVSQEIHSIDLDPSCSYQLAFHL-D-D------GWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSW 391 (489)
Q Consensus 320 ~~~~~~~~~~~i~~~~~~p~~~~~~~~~~-~-~------~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (489)
. ..........+.++|++.+++.... . + ....+++..+..+...... . .....+.+
T Consensus 258 --~-~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v------g-------~~p~gi~~ 321 (368)
T 1mda_H 258 --A-DNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN------G-------HDSDAIIA 321 (368)
T ss_dssp --H-TTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE------E-------EEECEEEE
T ss_pred --c-cccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC------C-------CCcceEEE
Confidence 0 0000001111345566655554332 1 1 1223555444433221100 0 01234677
Q ss_pred ecCCcEEEEeec-CCCcEEEEeccCCCCCCeeeccCcccchhh
Q 037120 392 LSTNSIYAVGSS-SDHGIHLLDFFPGSSSPSHVDYNEDIESLS 433 (489)
Q Consensus 392 ~~~~~~~l~sgs-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 433 (489)
.+++..++++.. .++.|.|+|+.+. +.+..+.
T Consensus 322 s~Dg~~l~va~~~~~~~VsVID~~t~----------kvv~~I~ 354 (368)
T 1mda_H 322 AQDGASDNYANSAGTEVLDIYDAASD----------QDQSSVE 354 (368)
T ss_dssp CCSSSCEEEEEETTTTEEEEEESSSC----------EEEEECC
T ss_pred CCCCCEEEEEccCCCCeEEEEECCCC----------cEEEEEE
Confidence 788777777777 6999999999999 7776654
No 224
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.40 E-value=1.9e-05 Score=69.69 Aligned_cols=158 Identities=15% Similarity=0.095 Sum_probs=97.1
Q ss_pred eeEEEECCCCcEEEEEecCC--eEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 99 ISALDFDCKGIYLVSATRSG--CLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~dg--~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
...+.|+ ++.++.+.+.+| .|+++|+.+++..... .+. ...+ --.++.. +..+.+....
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~------------~l~---~~~F-geGit~~--g~~ly~ltw~ 105 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQI------------ELG---KRYF-GEGISDW--KDKIVGLTWK 105 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEE------------ECC---TTCC-EEEEEEE--TTEEEEEESS
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEE------------ecC---Cccc-eeEEEEe--CCEEEEEEee
Confidence 6888998 778888888876 9999999996655431 000 0101 1113443 4446666655
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccC--
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTG-- 254 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-- 254 (489)
+ +.+.+||.... +.+..... .+ ....+++++. .|+.+..++.|.++|..+.+ .+..+.-
T Consensus 106 ~-~~v~v~D~~t~-----~~~~ti~~-----~~-----eG~glt~dg~-~L~~SdGs~~i~~iDp~T~~--v~~~I~V~~ 166 (262)
T 3nol_A 106 N-GLGFVWNIRNL-----RQVRSFNY-----DG-----EGWGLTHNDQ-YLIMSDGTPVLRFLDPESLT--PVRTITVTA 166 (262)
T ss_dssp S-SEEEEEETTTC-----CEEEEEEC-----SS-----CCCCEEECSS-CEEECCSSSEEEEECTTTCS--EEEEEECEE
T ss_pred C-CEEEEEECccC-----cEEEEEEC-----CC-----CceEEecCCC-EEEEECCCCeEEEEcCCCCe--EEEEEEecc
Confidence 5 99999999332 33322221 11 1123345777 55555557889999999866 3333221
Q ss_pred CC---CceeEEEEeecCCEEEEEeC-CCeEEEEEcCCCcccceeec
Q 037120 255 SH---GTLNSIQLHAENQIIFAAGK-HGSIYLWDLRGGRTSAPFHN 296 (489)
Q Consensus 255 h~---~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~~~~~~~~~ 296 (489)
.. ..++.+.|. +|. +++... ++.|.+.|.++++.+..+..
T Consensus 167 ~g~~~~~lNELe~~-~G~-lyan~w~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 167 HGEELPELNELEWV-DGE-IFANVWQTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp TTEECCCEEEEEEE-TTE-EEEEETTSSEEEEECTTTCBEEEEEEC
T ss_pred CCccccccceeEEE-CCE-EEEEEccCCeEEEEECCCCcEEEEEEC
Confidence 11 335567776 665 555554 88999999999998766653
No 225
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.39 E-value=0.00022 Score=67.96 Aligned_cols=270 Identities=11% Similarity=0.022 Sum_probs=137.8
Q ss_pred Eee--CCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeece--eeeeecCCcccCeeEEEEecCCCcEEEEEeCC----
Q 037120 162 RWN--LANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRR--SVTVVGSDVQKGLSDLAFSAVNTSRLIASDTH---- 233 (489)
Q Consensus 162 ~~~--~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~d---- 233 (489)
.++ ++...+++.+..+ +.|.|+|+......+ ++.+... .... -.+ ...-..+...|++ +++++..+
T Consensus 88 ~~~~~~~r~~l~v~~l~s-~~I~viD~~t~p~~p-~~~k~ie~~~~~~-~~g-~s~Ph~~~~~pdG--i~Vs~~g~~~g~ 161 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRS-SRIYIIDTKPNPREP-KIIKVIEPEEVKK-VSG-YSRLHTVHCGPDA--IYISALGNEEGE 161 (462)
T ss_dssp TCCTTCCSCEEEEEBTTT-CCEEEEECCSCTTSC-EEEEEECHHHHHH-HHC-EEEEEEEEECSSC--EEEEEEEETTSC
T ss_pred ccCCCccCCEEEEccCCC-CeEEEEECCCCCCCc-eeeeeechhhccc-ccC-CCcccceeECCCe--EEEEcCCCcCCC
Confidence 446 7777677767666 999999995443332 2222110 0000 001 0123457788988 56666655
Q ss_pred --CcEEEEECCCCCcCceeeccC--CC-CceeEEEEeecCCEEEEEe-------------------CCCeEEEEEcCCCc
Q 037120 234 --GVVNIWDRRVGVLPSLELSTG--SH-GTLNSIQLHAENQIIFAAG-------------------KHGSIYLWDLRGGR 289 (489)
Q Consensus 234 --g~i~iwd~~~~~~~~~~~~~~--h~-~~v~~~~~~p~~~~l~~~~-------------------~dg~i~lwd~~~~~ 289 (489)
|.|.++|..+.+ ++..... .. ..-..+-|+|+++.+++.. .+.+|.+||+.+++
T Consensus 162 ~~g~v~vlD~~T~~--v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k 239 (462)
T 2ece_A 162 GPGGILMLDHYSFE--PLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK 239 (462)
T ss_dssp SCCEEEEECTTTCC--EEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE
T ss_pred CCCeEEEEECCCCe--EEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc
Confidence 789999999877 4544431 11 1233588899999888874 37899999999987
Q ss_pred ccceeecCCccCCCCeeEEEe--CCCCcceeeccc-cceeeccceeEEEeCCCCCeEEEEEecCCce--EEEEeecccee
Q 037120 290 TSAPFHNHKEVCHLPLTSLKL--ASMLEKIGTLKA-QSKIVSQEIHSIDLDPSCSYQLAFHLDDGWS--GVLDVYNSRVS 364 (489)
Q Consensus 290 ~~~~~~~~~~~~~~~v~~l~~--~~~~~~i~~~~~-~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~--~~~~~~~~~~~ 364 (489)
.+.++...... .....+.| +|++++..-... ..+.....|..+.+. ++.|. .++++......
T Consensus 240 ~~~tI~vg~~g--~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d-----------~g~~~~~~vIdi~~~~v~ 306 (462)
T 2ece_A 240 RIHSLTLGEEN--RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYE-----------DGKWNAEKVIEIPAEPLE 306 (462)
T ss_dssp EEEEEESCTTE--EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEE-----------TTEEEEEEEEEECCEECC
T ss_pred EeeEEecCCCC--CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEec-----------CCceeEEEEEeCCCcccc
Confidence 77777642111 11344544 777765432110 000011222222221 11132 23332211111
Q ss_pred eecCCC---CCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhccc
Q 037120 365 HVHCPP---PAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKE 441 (489)
Q Consensus 365 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (489)
. .++ ..|.... .....+..+++|..+.++.-..+.|.++|+.... .+ +.+..+...+.....
T Consensus 307 ~--~lp~~~~~f~~~~------~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~-~~------~lv~~I~tGG~~~~~ 371 (462)
T 2ece_A 307 G--NLPEILKPFKAVP------PLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPF-KP------VLTGKVKLGGIFHRA 371 (462)
T ss_dssp S--SCCGGGGGGTEEC------CCCCCEEECTTSCEEEEEETTTTEEEEEECSSTT-SC------EEEEEEECBTTTTCB
T ss_pred c--cccccccccccCC------CceeEEEECCCCCEEEEEeCCCCEEEEEEecCCC-Cc------EEEEEEEeCCeeccc
Confidence 1 000 0000000 0123356778888888888888999999996330 11 122222100000000
Q ss_pred CCc--ccCCCceEEEEeeCCCCeEEecc
Q 037120 442 NRF--VPLSEGVTACVTHPLNNTIVAGT 467 (489)
Q Consensus 442 ~~~--~~h~~~V~~va~~p~~~~i~sgs 467 (489)
... ....+.-..++++|+++++.++.
T Consensus 372 ~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 372 DHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred cccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 000 00112357789999999777776
No 226
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.38 E-value=2.9e-05 Score=69.25 Aligned_cols=159 Identities=12% Similarity=0.029 Sum_probs=97.8
Q ss_pred eeEEEECCCCcEEEEEec--CCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 99 ISALDFDCKGIYLVSATR--SGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~--dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
...++|+++|.++++.+. ++.|+++|..+++..... ....+ .. ...+++. +..+.++...
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i------------~l~~~-~f---geGi~~~--g~~lyv~t~~ 84 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIH------------KMDDS-YF---GEGLTLL--NEKLYQVVWL 84 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEE------------ECCTT-CC---EEEEEEE--TTEEEEEETT
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEE------------ecCCC-cc---eEEEEEe--CCEEEEEEec
Confidence 678899999866666554 689999999986655421 00001 01 2235555 3345566555
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeecc-C-
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELST-G- 254 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~- 254 (489)
+ +.+.++|... .+++.... .+ ... ...++++++ .++.+..++.|.++|..+.+ ....+. +
T Consensus 85 ~-~~v~viD~~t-----~~v~~~i~------~g-~~~--g~glt~Dg~-~l~vs~gs~~l~viD~~t~~--v~~~I~Vg~ 146 (266)
T 2iwa_A 85 K-NIGFIYDRRT-----LSNIKNFT------HQ-MKD--GWGLATDGK-ILYGSDGTSILYEIDPHTFK--LIKKHNVKY 146 (266)
T ss_dssp C-SEEEEEETTT-----TEEEEEEE------CC-SSS--CCEEEECSS-SEEEECSSSEEEEECTTTCC--EEEEEECEE
T ss_pred C-CEEEEEECCC-----CcEEEEEE------CC-CCC--eEEEEECCC-EEEEECCCCeEEEEECCCCc--EEEEEEECC
Confidence 5 9999999832 23333222 11 011 133566888 45555578999999998865 332222 1
Q ss_pred CC---CceeEEEEeecCCEEEEEe-CCCeEEEEEcCCCcccceee
Q 037120 255 SH---GTLNSIQLHAENQIIFAAG-KHGSIYLWDLRGGRTSAPFH 295 (489)
Q Consensus 255 h~---~~v~~~~~~p~~~~l~~~~-~dg~i~lwd~~~~~~~~~~~ 295 (489)
+. ..++.+.|. ++ .+++.. .++.|.+.|..+++.+..+.
T Consensus 147 ~~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 147 NGHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKDGTLLGWIL 189 (266)
T ss_dssp TTEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTTCCEEEEEE
T ss_pred CCcccccceeEEEE-CC-EEEEecCCCCeEEEEECCCCcEEEEEE
Confidence 11 236678887 66 455555 48899999999998766665
No 227
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.35 E-value=1.2e-05 Score=74.28 Aligned_cols=184 Identities=9% Similarity=0.025 Sum_probs=105.8
Q ss_pred CCceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEE--
Q 037120 96 KPGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVAC-- 173 (489)
Q Consensus 96 ~~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s-- 173 (489)
...+..++++++|+++++...++.|.+|+.+. .... +..... ...... +..+++.+++. ++++
T Consensus 85 ~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g-~~~~---------~~~~~~-~~~~~~---~~~i~~d~dG~-l~~td~ 149 (305)
T 3dr2_A 85 TAFTNGNAVDAQQRLVHCEHGRRAITRSDADG-QAHL---------LVGRYA-GKRLNS---PNDLIVARDGA-IWFTDP 149 (305)
T ss_dssp CSCEEEEEECTTSCEEEEETTTTEEEEECTTS-CEEE---------EECEET-TEECSC---CCCEEECTTSC-EEEECC
T ss_pred CCccceeeECCCCCEEEEECCCCEEEEECCCC-CEEE---------EEeccC-CCccCC---CCCEEECCCCC-EEEeCc
Confidence 34588999999999777666678899998763 2111 000000 000112 56699999985 6665
Q ss_pred --EecC------------CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCC------
Q 037120 174 --ASTR------------SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTH------ 233 (489)
Q Consensus 174 --~~~d------------~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~d------ 233 (489)
+..+ .+.|..||...+ +. ..+. .....+.++|+|++. .|+.+...
T Consensus 150 ~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g--~~-~~~~-----------~~~~p~gl~~spdg~-~lyv~~~~~~~~~~ 214 (305)
T 3dr2_A 150 PFGLRKPSQGCPADPELAHHSVYRLPPDGS--PL-QRMA-----------DLDHPNGLAFSPDEQ-TLYVSQTPEQGHGS 214 (305)
T ss_dssp SGGGSCGGGSCCCCCSSSCEEEEEECSSSC--CC-EEEE-----------EESSEEEEEECTTSS-EEEEEECCC---CC
T ss_pred CCCccccccccccccccCCCeEEEEcCCCC--cE-EEEe-----------cCCCCcceEEcCCCC-EEEEEecCCcCCCC
Confidence 3211 145666665222 11 1111 112567899999998 66666544
Q ss_pred CcEEEEECCCCCcCceeec-cCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCC
Q 037120 234 GVVNIWDRRVGVLPSLELS-TGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLAS 312 (489)
Q Consensus 234 g~i~iwd~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 312 (489)
+.|.+||+..+.....+.+ .........++++++|++ .++..+ .|.+||. .++.+..+.... . +.+++|.+
T Consensus 215 ~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~l-wv~~~~-gv~~~~~-~g~~~~~~~~~~-~----~~~~~f~~ 286 (305)
T 3dr2_A 215 VEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWL-WSSSGT-GVCVFDS-DGQLLGHIPTPG-T----ASNCTFDQ 286 (305)
T ss_dssp CEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCE-EECCSS-EEEEECT-TSCEEEEEECSS-C----CCEEEECT
T ss_pred CEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCE-EEecCC-cEEEECC-CCCEEEEEECCC-c----eeEEEEeC
Confidence 7899999875431101111 112344567899999994 444444 4999998 455555554332 3 56666666
Q ss_pred CCcce
Q 037120 313 MLEKI 317 (489)
Q Consensus 313 ~~~~i 317 (489)
+++.+
T Consensus 287 d~~~L 291 (305)
T 3dr2_A 287 AQQRL 291 (305)
T ss_dssp TSCEE
T ss_pred CCCEE
Confidence 55433
No 228
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.35 E-value=3.1e-05 Score=73.05 Aligned_cols=258 Identities=8% Similarity=-0.095 Sum_probs=137.0
Q ss_pred EEEEEecCCC----EEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe----------CCCc
Q 037120 170 EVACASTRSN----VVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD----------THGV 235 (489)
Q Consensus 170 ~l~s~~~d~g----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s----------~dg~ 235 (489)
++++...+ + +|.++|... .+++.... .+.. + .+.++|+++ .++.+. .++.
T Consensus 34 ~yV~~~~~-~~~~d~vsvID~~t-----~~v~~~i~------vG~~-P--~i~~spDg~-~lyVan~~~~r~~~G~~~~~ 97 (368)
T 1mda_H 34 SHITLPAY-FAGTTENWVSCAGC-----GVTLGHSL------GAFL-S--LAVAGHSGS-DFALASTSFARSAKGKRTDY 97 (368)
T ss_dssp EEEEECTT-TCSSEEEEEEETTT-----TEEEEEEE------ECTT-C--EEEECTTSS-CEEEEEEEETTTTSSSEEEE
T ss_pred EEEECCcc-CCccceEEEEECCC-----CeEEEEEe------CCCC-C--ceEECCCCC-EEEEEcccccccccCCCCCE
Confidence 44444433 5 888999832 24444333 2222 3 699999999 555554 4789
Q ss_pred EEEEECCCCCcCceeeccCC-------CCceeEEEEeecCCEEEEEeC--CCeEEE--EEcCCCcccceeecCCccC---
Q 037120 236 VNIWDRRVGVLPSLELSTGS-------HGTLNSIQLHAENQIIFAAGK--HGSIYL--WDLRGGRTSAPFHNHKEVC--- 301 (489)
Q Consensus 236 i~iwd~~~~~~~~~~~~~~h-------~~~v~~~~~~p~~~~l~~~~~--dg~i~l--wd~~~~~~~~~~~~~~~~~--- 301 (489)
|.+||+.+.+ .+..+... ......++++|||++++++.. +..|.+ +|+.+ +..+.......
T Consensus 98 VsviD~~T~~--vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p 172 (368)
T 1mda_H 98 VEVFDPVTFL--PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHP 172 (368)
T ss_dssp EEEECTTTCC--EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEE
T ss_pred EEEEECCCCC--EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEcc
Confidence 9999999977 44443211 123457999999999999875 467888 99876 23332100000
Q ss_pred CCCeeEEEeCCCCccee-eccc----ccee----------eccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeee
Q 037120 302 HLPLTSLKLASMLEKIG-TLKA----QSKI----------VSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHV 366 (489)
Q Consensus 302 ~~~v~~l~~~~~~~~i~-~~~~----~~~~----------~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 366 (489)
...-.-+.++++++.+. .+.. ..+. ...+. . .+++..++..+. +. ..+++........+
T Consensus 173 ~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~-V~viD~~~~~~~v~ 246 (368)
T 1mda_H 173 GAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SS-ILQGDIPAAGATMK 246 (368)
T ss_dssp EETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SC-CEEEECCSSCCEEE
T ss_pred CCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CE-EEEEECCCCcceEE
Confidence 00011244555554432 1111 0000 01111 1 344444333333 21 12333322111000
Q ss_pred cCCCCCCcCCCCc----cccccCCCcceeecCCcEEEEeec---C-----CCcEEEEeccCCCCCCeeeccCcccchhhH
Q 037120 367 HCPPPAWLSDSNN----SADQLHLRKPSWLSTNSIYAVGSS---S-----DHGIHLLDFFPGSSSPSHVDYNEDIESLSE 434 (489)
Q Consensus 367 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~sgs---~-----d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 434 (489)
. .|...... ...-...+...+.+++..+.++.. . ++.+.++|+.+. +.+..+.
T Consensus 247 ~----~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~----------~vv~~i~- 311 (368)
T 1mda_H 247 A----AIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG----------QTSGPIS- 311 (368)
T ss_dssp C----CCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC----------CEEECCE-
T ss_pred E----EEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC----------eEEEEEE-
Confidence 0 01110000 000011122567888877777643 2 235669999998 7776665
Q ss_pred hhhhcccCCcccCCCceEEEEeeCCCC-eEEecc-CcceeEEEeccccc
Q 037120 435 RTKLKKENRFVPLSEGVTACVTHPLNN-TIVAGT-KNSSLLVVSQKQQC 481 (489)
Q Consensus 435 ~~~~~~~~~~~~h~~~V~~va~~p~~~-~i~sgs-~dg~i~v~~~~~~~ 481 (489)
-.....+++|+|+++ .+++.. .++.|.|+.-+...
T Consensus 312 ------------vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 312 ------------NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp ------------EEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred ------------CCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 223589999999997 566766 59999998765543
No 229
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.31 E-value=0.00062 Score=61.19 Aligned_cols=158 Identities=8% Similarity=-0.017 Sum_probs=97.4
Q ss_pred ceeEEEECCCCcE-EEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 98 GISALDFDCKGIY-LVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 98 ~V~~~~fs~~g~~-la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
.+.+++|++++.. +++-..++.|.+++........ .... .... ...+++.+++..++++-..
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~--------~~~~------~~~~---p~~ia~d~~~~~lyv~d~~ 99 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTT--------IIRQ------DLGS---PEGIALDHLGRTIFWTDSQ 99 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEE--------EECT------TCCC---EEEEEEETTTTEEEEEETT
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEE--------EEEC------CCCC---ccEEEEEecCCeEEEEECC
Confidence 4678999996554 4555557899999987632111 0000 0112 6779999976656666665
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeC--CCcEEEEECCCCCcCceeeccC
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDT--HGVVNIWDRRVGVLPSLELSTG 254 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~ 254 (489)
. +.|.++++.... ...+. .........+++.|++..++++... .+.|..+++.......+ ...
T Consensus 100 ~-~~I~~~~~~g~~---~~~~~---------~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~--~~~ 164 (267)
T 1npe_A 100 L-DRIEVAKMDGTQ---RRVLF---------DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL--AQD 164 (267)
T ss_dssp T-TEEEEEETTSCS---CEEEE---------CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE--ECT
T ss_pred C-CEEEEEEcCCCC---EEEEE---------ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE--EEC
Confidence 5 899999984211 11111 1111356889999976624444433 46888888764331111 112
Q ss_pred CCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCC
Q 037120 255 SHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRG 287 (489)
Q Consensus 255 h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~ 287 (489)
.-.....++++|++..|+.+.. .+.|.++|+..
T Consensus 165 ~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g 198 (267)
T 1npe_A 165 NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ 198 (267)
T ss_dssp TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE
T ss_pred CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC
Confidence 2245688999998887777765 78899998864
No 230
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.29 E-value=2.2e-05 Score=77.44 Aligned_cols=218 Identities=9% Similarity=-0.057 Sum_probs=122.3
Q ss_pred CCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEE-e-cCCCcEEEEEe------------
Q 037120 166 ANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAF-S-AVNTSRLIASD------------ 231 (489)
Q Consensus 166 ~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~-~~~~~~l~s~s------------ 231 (489)
|+..++++...+ +.|.+.|+... ++.+... .........+++ . |++. +++.++
T Consensus 100 DG~~lfVnd~~~-~rVavIdl~t~-----~~~~ii~------ip~g~~phg~~~~~~p~~~-~v~~~~~~~~p~~~dg~~ 166 (595)
T 1fwx_A 100 DGRFLFMNDKAN-TRVARVRCDVM-----KCDAILE------IPNAKGIHGLRPQKWPRSN-YVFCNGEDETPLVNDGTN 166 (595)
T ss_dssp EEEEEEEEETTT-TEEEEEETTTT-----EEEEEEE------CSSCCSEEEEEECCSSBCS-EEEEEECSCEESSCSSSS
T ss_pred CCCEEEEEcCCC-CEEEEEECCCc-----eEeeEEe------CCCCCCCcceeeeecCCCc-EEEEecccccccCCCCcc
Confidence 777677766655 89999999433 2222111 111235778887 4 8898 666663
Q ss_pred ------CCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCC---------------CeEEEEEcCCCcc
Q 037120 232 ------THGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKH---------------GSIYLWDLRGGRT 290 (489)
Q Consensus 232 ------~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d---------------g~i~lwd~~~~~~ 290 (489)
.++.+.+.|..+.+ ......- .+...-++++|+|+++++++.+ ..|.+.|......
T Consensus 167 l~~~~~~~~~vtvID~~t~~--v~~qI~V-gg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~ 243 (595)
T 1fwx_A 167 MEDVANYVNVFTAVDADKWE--VAWQVLV-SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK 243 (595)
T ss_dssp TTCGGGEEEEEEEEETTTTE--EEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH
T ss_pred cccccccCceEEEEECCCCe--EEEEEEe-CCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeE
Confidence 34689999999754 2222211 1134568899999999999874 3577777654322
Q ss_pred cceee-cCCccCCCCeeEEEeCCC-Ccc-eeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccce----
Q 037120 291 SAPFH-NHKEVCHLPLTSLKLASM-LEK-IGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRV---- 363 (489)
Q Consensus 291 ~~~~~-~~~~~~~~~v~~l~~~~~-~~~-i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~---- 363 (489)
... +.... ...|.-+..... +.. +.. .........+.++|||+++++......-..+++..+...
T Consensus 244 --~v~~Gk~~~-i~~V~VID~~~~~~~~~~~~-----Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~ 315 (595)
T 1fwx_A 244 --AIAAGDYQE-LNGVKVVDGRKEASSLFTRY-----IPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYE 315 (595)
T ss_dssp --HHHHTCSEE-ETTEEEEECSGGGCCSSEEE-----EEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHS
T ss_pred --eccCCCeeE-ECcEEEEeCcccCCceeEEE-----EecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccccccccc
Confidence 000 00000 000222221110 111 111 112345678999999999998877766545555543210
Q ss_pred --eeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccC
Q 037120 364 --SHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFP 415 (489)
Q Consensus 364 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~ 415 (489)
.....+....... ...+..+|.++| ...++.--|+.|-+||+..
T Consensus 316 ~l~~~~~v~~~v~vG-------~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 316 NADPRSAVVAEPELG-------LGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CCCGGGGEEECCBCC-------SCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred ccCcccceEEEcCCC-------CCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 0000000000011 234667889998 6667778999999999976
No 231
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.28 E-value=4.7e-05 Score=72.52 Aligned_cols=162 Identities=12% Similarity=0.144 Sum_probs=96.6
Q ss_pred eEEEECCCCcEEEEEecC------CeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEE
Q 037120 100 SALDFDCKGIYLVSATRS------GCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVAC 173 (489)
Q Consensus 100 ~~~~fs~~g~~la~g~~d------g~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s 173 (489)
..+...|+| +++++..+ |.|.++|..+.+....- ... ..-..-.++ +.|+|++. .+++
T Consensus 141 h~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~--------~~~---~~~~~~~Yd---~~~~p~~~-~mvs 204 (462)
T 2ece_A 141 HTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKW--------EID---RGDQYLAYD---FWWNLPNE-VLVS 204 (462)
T ss_dssp EEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEEC--------CSB---CTTCCCCCC---EEEETTTT-EEEE
T ss_pred cceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEE--------ccC---CCCccccce---EEECCCCC-EEEE
Confidence 345678999 66655555 78999999986655431 100 001112233 88899986 5555
Q ss_pred Ee------------------cCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEE--ecCCCcEEEEEe--
Q 037120 174 AS------------------TRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAF--SAVNTSRLIASD-- 231 (489)
Q Consensus 174 ~~------------------~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~l~s~s-- 231 (489)
.. ..+.+|.+||+... +.+.... +.........+.| +|+++..++++-
T Consensus 205 S~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~-----k~~~tI~-----vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~ 274 (462)
T 2ece_A 205 SEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR-----KRIHSLT-----LGEENRMALELRPLHDPTKLMGFINMVVS 274 (462)
T ss_dssp CBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT-----EEEEEEE-----SCTTEEEEEEEEECSSTTCCEEEEEEEEE
T ss_pred ccCcCccccccccchhhhhhccCCEEEEEECCCC-----cEeeEEe-----cCCCCCccceeEeeECCCCCEEEEEEeee
Confidence 53 12379999999432 2222221 1101123445656 999994455555
Q ss_pred ---CCCcEEEEECCCCCcCceeec--cC----------------CCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCC
Q 037120 232 ---THGVVNIWDRRVGVLPSLELS--TG----------------SHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRG 287 (489)
Q Consensus 232 ---~dg~i~iwd~~~~~~~~~~~~--~~----------------h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~ 287 (489)
.+++|.+|....++....+.+ .. -......|.++|||++|+++.. .+.|.+||+..
T Consensus 275 ~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 275 LKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp TTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred ccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 677887765543321111110 00 0234678999999999999977 88999999863
No 232
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.27 E-value=7.5e-05 Score=65.86 Aligned_cols=156 Identities=15% Similarity=0.068 Sum_probs=97.9
Q ss_pred eeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCC
Q 037120 99 ISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRS 178 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~ 178 (489)
...+.|+ ++.++.+.+.+|.|+++|+++++.... . +. ...+ --.+++ ++..+.+....+
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~--------~-----l~---~~~F-geGit~--~g~~Ly~ltw~~- 115 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWM--------E-----RL---GNIF-AEGLAS--DGERLYQLTWTE- 115 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEE--------E-----EC---TTCC-EEEEEE--CSSCEEEEESSS-
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeE--------E-----CC---CCcc-eeEEEE--eCCEEEEEEccC-
Confidence 6788887 467888888899999999998554441 1 10 0101 112444 344566666666
Q ss_pred CEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeecc--CCC
Q 037120 179 NVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELST--GSH 256 (489)
Q Consensus 179 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--~h~ 256 (489)
+.+.+||.... +.+..... .+ .=..++ ++++ .|+.+..++.|.++|..+.+ .+..+. .+.
T Consensus 116 ~~v~V~D~~Tl-----~~~~ti~~-----~~---eGwGLt--~Dg~-~L~vSdGs~~l~~iDp~T~~--v~~~I~V~~~g 177 (268)
T 3nok_A 116 GLLFTWSGMPP-----QRERTTRY-----SG---EGWGLC--YWNG-KLVRSDGGTMLTFHEPDGFA--LVGAVQVKLRG 177 (268)
T ss_dssp CEEEEEETTTT-----EEEEEEEC-----SS---CCCCEE--EETT-EEEEECSSSEEEEECTTTCC--EEEEEECEETT
T ss_pred CEEEEEECCcC-----cEEEEEeC-----CC---ceeEEe--cCCC-EEEEECCCCEEEEEcCCCCe--EEEEEEeCCCC
Confidence 99999999322 33333221 11 113343 5677 66666678999999999876 333322 111
Q ss_pred ---CceeEEEEeecCCEEEEEe-CCCeEEEEEcCCCcccceee
Q 037120 257 ---GTLNSIQLHAENQIIFAAG-KHGSIYLWDLRGGRTSAPFH 295 (489)
Q Consensus 257 ---~~v~~~~~~p~~~~l~~~~-~dg~i~lwd~~~~~~~~~~~ 295 (489)
..++.+.|. +|. +++.. .++.|.+.|.++++.+..+.
T Consensus 178 ~~v~~lNeLe~~-dG~-lyanvw~s~~I~vIDp~TG~V~~~Id 218 (268)
T 3nok_A 178 QPVELINELECA-NGV-IYANIWHSSDVLEIDPATGTVVGVID 218 (268)
T ss_dssp EECCCEEEEEEE-TTE-EEEEETTCSEEEEECTTTCBEEEEEE
T ss_pred cccccccccEEe-CCE-EEEEECCCCeEEEEeCCCCcEEEEEE
Confidence 235677776 665 55555 48899999999998766665
No 233
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.25 E-value=0.00013 Score=67.72 Aligned_cols=168 Identities=7% Similarity=-0.012 Sum_probs=94.6
Q ss_pred eeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCC
Q 037120 99 ISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRS 178 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~ 178 (489)
+.++.+.++|.+++ ++.+ |..+|. +....... .... .. ....... + ..+..++.+
T Consensus 62 ~~~~~~~~~g~l~v-~t~~--l~~~d~-~g~~~~~~--------~~~~------~~---~~~~~~~-~--~~l~v~t~~- 116 (330)
T 3hxj_A 62 ECRPSIGKDGTIYF-GSDK--VYAINP-DGTEKWRF--------DTKK------AI---VSDFTIF-E--DILYVTSMD- 116 (330)
T ss_dssp EECCEETTTTEECC-SSCE--EEEECC-CGGGGGGS--------CC--------------CCEEEE-T--TEEEEECTT-
T ss_pred ccceEEecCCcEEE-ecCc--EEEECC-CCcEEEEE--------ECCC------Cc---ccCceEE-C--CEEEEEecC-
Confidence 57778888886544 4444 888886 32222110 0000 00 1122333 3 355666666
Q ss_pred CEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCc
Q 037120 179 NVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGT 258 (489)
Q Consensus 179 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~ 258 (489)
+.|..+|.. + . .... . ..+...+.++...+++. ++.++.++.|..+|.. ++ ...........
T Consensus 117 ~~l~~~d~~-g--~--~~~~----~----~~~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d~~-g~--~~~~~~~~~~~ 178 (330)
T 3hxj_A 117 GHLYAINTD-G--T--EKWR----F----KTKKAIYATPIVSEDGT--IYVGSNDNYLYAINPD-GT--EKWRFKTNDAI 178 (330)
T ss_dssp SEEEEECTT-S--C--EEEE----E----ECSSCCCSCCEECTTSC--EEEECTTSEEEEECTT-SC--EEEEEECSSCC
T ss_pred CEEEEEcCC-C--C--EEEE----E----cCCCceeeeeEEcCCCE--EEEEcCCCEEEEECCC-CC--EeEEEecCCCc
Confidence 899999873 2 1 1111 1 11223456666666665 6667788999999988 55 22223333456
Q ss_pred eeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcce
Q 037120 259 LNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKI 317 (489)
Q Consensus 259 v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i 317 (489)
+.++.+.+++... +++ +.|..|| .+++.+..+...... +.++...++|...
T Consensus 179 ~~~~~~d~~g~l~-v~t--~~l~~~d-~~g~~~~~~~~~~~~----~~~~~~~~~g~l~ 229 (330)
T 3hxj_A 179 TSAASIGKDGTIY-FGS--DKVYAIN-PDGTEKWNFYAGYWT----VTRPAISEDGTIY 229 (330)
T ss_dssp CSCCEECTTCCEE-EES--SSEEEEC-TTSCEEEEECCSSCC----CSCCEECTTSCEE
T ss_pred eeeeEEcCCCEEE-EEe--CEEEEEC-CCCcEEEEEccCCcc----eeceEECCCCeEE
Confidence 7778887787754 444 8899999 676665554433333 6666677666544
No 234
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.19 E-value=0.00023 Score=62.22 Aligned_cols=157 Identities=14% Similarity=0.055 Sum_probs=95.1
Q ss_pred eeEEEECCCCcEEEEEecCC--eEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 99 ISALDFDCKGIYLVSATRSG--CLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~dg--~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
+..+.|+. +.++.+.+.+| .|+++|+.+++..... .+.. ..++ -.++.. +..+......
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~------------~l~~---~~fg-eGi~~~--~~~ly~ltw~ 83 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRA------------EVPP---PYFG-AGIVAW--RDRLIQLTWR 83 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEE------------ECCT---TCCE-EEEEEE--TTEEEEEESS
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEE------------eCCC---Ccce-eEEEEe--CCEEEEEEee
Confidence 77889987 67777777754 8999999996655421 0000 0011 113443 3446666666
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeecc--C
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELST--G 254 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--~ 254 (489)
+ +.+.+||.... +.+.... . .+ .=..+ .+++. .|+.+..++.|.++|..+.+ .+..+. .
T Consensus 84 ~-~~v~v~D~~tl-----~~~~ti~---~--~~---~Gwgl--t~dg~-~L~vSdgs~~l~~iDp~t~~--~~~~I~V~~ 144 (243)
T 3mbr_X 84 N-HEGFVYDLATL-----TPRARFR---Y--PG---EGWAL--TSDDS-HLYMSDGTAVIRKLDPDTLQ--QVGSIKVTA 144 (243)
T ss_dssp S-SEEEEEETTTT-----EEEEEEE---C--SS---CCCEE--EECSS-CEEEECSSSEEEEECTTTCC--EEEEEECEE
T ss_pred C-CEEEEEECCcC-----cEEEEEe---C--CC---CceEE--eeCCC-EEEEECCCCeEEEEeCCCCe--EEEEEEEcc
Confidence 6 99999999322 3333222 1 11 11344 45677 55555668999999999876 333322 1
Q ss_pred CC---CceeEEEEeecCCEEEEEe-CCCeEEEEEcCCCcccceee
Q 037120 255 SH---GTLNSIQLHAENQIIFAAG-KHGSIYLWDLRGGRTSAPFH 295 (489)
Q Consensus 255 h~---~~v~~~~~~p~~~~l~~~~-~dg~i~lwd~~~~~~~~~~~ 295 (489)
+. ..++.+.+. +|. +++.. .+..|.+.|.++++.+..+.
T Consensus 145 ~g~~~~~lNeLe~~-~G~-lyanvw~s~~I~vIDp~tG~V~~~id 187 (243)
T 3mbr_X 145 GGRPLDNLNELEWV-NGE-LLANVWLTSRIARIDPASGKVVAWID 187 (243)
T ss_dssp TTEECCCEEEEEEE-TTE-EEEEETTTTEEEEECTTTCBEEEEEE
T ss_pred CCcccccceeeEEe-CCE-EEEEECCCCeEEEEECCCCCEEEEEE
Confidence 11 245566665 555 55555 47899999999999866665
No 235
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.05 E-value=0.00065 Score=60.51 Aligned_cols=211 Identities=11% Similarity=0.045 Sum_probs=112.6
Q ss_pred CeeEEEEecCCCcEEEEEeC--CCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCCCc
Q 037120 213 GLSDLAFSAVNTSRLIASDT--HGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRGGR 289 (489)
Q Consensus 213 ~v~~~~~~~~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~~ 289 (489)
....++|++++. ++++.+. ++.|.++|+.+++ .+....- ........+..++..++.+.. ++.+.++|..+++
T Consensus 22 f~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~tg~--v~~~i~l-~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~ 97 (266)
T 2iwa_A 22 FTQGLVYAENDT-LFESTGLYGRSSVRQVALQTGK--VENIHKM-DDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLS 97 (266)
T ss_dssp CEEEEEECSTTE-EEEEECSTTTCEEEEEETTTCC--EEEEEEC-CTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTE
T ss_pred CcccEEEeCCCe-EEEECCCCCCCEEEEEECCCCC--EEEEEec-CCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCc
Confidence 457899999865 5565553 6899999999987 4443321 111222233345667777766 9999999999988
Q ss_pred ccceeecCCccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeeccceeeecCC
Q 037120 290 TSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVSHVHCP 369 (489)
Q Consensus 290 ~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 369 (489)
.+.++...... ...+++||+.+..... ...+.- ++|....+. ..+.+.... ..+
T Consensus 98 v~~~i~~g~~~------g~glt~Dg~~l~vs~g-----s~~l~v--iD~~t~~v~---------~~I~Vg~~~-~p~--- 151 (266)
T 2iwa_A 98 NIKNFTHQMKD------GWGLATDGKILYGSDG-----TSILYE--IDPHTFKLI---------KKHNVKYNG-HRV--- 151 (266)
T ss_dssp EEEEEECCSSS------CCEEEECSSSEEEECS-----SSEEEE--ECTTTCCEE---------EEEECEETT-EEC---
T ss_pred EEEEEECCCCC------eEEEEECCCEEEEECC-----CCeEEE--EECCCCcEE---------EEEEECCCC-ccc---
Confidence 87777632111 1123334433321000 111111 122211111 011111000 000
Q ss_pred CCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhcc--cCCcccC
Q 037120 370 PPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKK--ENRFVPL 447 (489)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~h 447 (489)
.....+.|. + +.+.+....++.|.+.|..++ +.+..+...+..+. ... .+-
T Consensus 152 --------------~~~nele~~-d-g~lyvn~~~~~~V~vID~~tg----------~V~~~I~~~g~~~~~~~~~-~~~ 204 (266)
T 2iwa_A 152 --------------IRLNELEYI-N-GEVWANIWQTDCIARISAKDG----------TLLGWILLPNLRKKLIDEG-FRD 204 (266)
T ss_dssp --------------CCEEEEEEE-T-TEEEEEETTSSEEEEEETTTC----------CEEEEEECHHHHHHHHHTT-CTT
T ss_pred --------------ccceeEEEE-C-CEEEEecCCCCeEEEEECCCC----------cEEEEEECCCccccccccc-ccc
Confidence 000112333 3 455566667889999999998 66655542211100 000 011
Q ss_pred CCceEEEEeeCCCC-eEEeccCcceeEEEecccc
Q 037120 448 SEGVTACVTHPLNN-TIVAGTKNSSLLVVSQKQQ 480 (489)
Q Consensus 448 ~~~V~~va~~p~~~-~i~sgs~dg~i~v~~~~~~ 480 (489)
....+.++|+|+++ .++++...+.|.++.-...
T Consensus 205 ~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 205 IDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp CCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred cCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 24679999999985 7888888888888755443
No 236
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.04 E-value=0.0016 Score=67.03 Aligned_cols=79 Identities=14% Similarity=0.245 Sum_probs=53.9
Q ss_pred eEEEEecCCCcEEEEEeCCC-------------------cEEEEECCCCCcCceeecc-CCC-------CceeEEEEeec
Q 037120 215 SDLAFSAVNTSRLIASDTHG-------------------VVNIWDRRVGVLPSLELST-GSH-------GTLNSIQLHAE 267 (489)
Q Consensus 215 ~~~~~~~~~~~~l~s~s~dg-------------------~i~iwd~~~~~~~~~~~~~-~h~-------~~v~~~~~~p~ 267 (489)
..+++.|++. +++.+..++ .|..+|.++++.. .+... .|. .....+....+
T Consensus 246 ~~~~~d~~~~-~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~-W~~~~~~~d~wd~~~~~~p~l~~~~~d 323 (677)
T 1kb0_A 246 DSMTFDAELN-TMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYK-WHYQETPGDNWDYTSTQPMILADIKIA 323 (677)
T ss_dssp SCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEE-EEEESSTTCCSCCCCCSCCEEEEEEET
T ss_pred cceeEcCCCC-EEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEE-EEEecCCCcccccccCCCcEEEecccC
Confidence 4678888888 777776554 5999999998743 21111 221 12233344457
Q ss_pred C---CEEEEEeCCCeEEEEEcCCCcccceee
Q 037120 268 N---QIIFAAGKHGSIYLWDLRGGRTSAPFH 295 (489)
Q Consensus 268 ~---~~l~~~~~dg~i~lwd~~~~~~~~~~~ 295 (489)
| ..++.++.+|.|+++|.++|+.+..+.
T Consensus 324 G~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 324 GKPRKVILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred CcEeeEEEEECCCCEEEEEECCCCCEecccc
Confidence 7 678888889999999999999866554
No 237
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.99 E-value=0.0079 Score=53.81 Aligned_cols=96 Identities=13% Similarity=0.070 Sum_probs=61.7
Q ss_pred CeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCCCccc
Q 037120 213 GLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRGGRTS 291 (489)
Q Consensus 213 ~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~~~~ 291 (489)
.+..++|.+++..++++-...+.|..+|...... .............++++|++..++.+.. .+.|.++|+.... .
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~--~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~ 113 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP--TTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-R 113 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC--EEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-C
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc--EEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-E
Confidence 5678999997774566666788999999976542 2222222246789999998777776655 7899999987432 2
Q ss_pred ceee-cCCccCCCCeeEEEeCCCCc
Q 037120 292 APFH-NHKEVCHLPLTSLKLASMLE 315 (489)
Q Consensus 292 ~~~~-~~~~~~~~~v~~l~~~~~~~ 315 (489)
..+. ..... ...++++|++.
T Consensus 114 ~~~~~~~~~~----P~~i~vd~~~g 134 (267)
T 1npe_A 114 RVLFDTGLVN----PRGIVTDPVRG 134 (267)
T ss_dssp EEEECSSCSS----EEEEEEETTTT
T ss_pred EEEEECCCCC----ccEEEEeeCCC
Confidence 2221 11122 56777777543
No 238
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.99 E-value=0.0019 Score=59.79 Aligned_cols=197 Identities=11% Similarity=-0.011 Sum_probs=106.7
Q ss_pred ceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCC---cccc--cccccCCCCCCceeEEEeeC-CCCCEE
Q 037120 98 GISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGL---KEDQ--SKHLLHIPLPQQLDAVRWNL-ANQDEV 171 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~---~~~~--~~~~~h~~~~~~V~~v~~~~-~~~~~l 171 (489)
...+++++++|+++.++..++.|..|+..+............+. .... ......... ...+++.+ ++ .++
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---p~gi~~~~~~g-~l~ 95 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGR---TYDISYNLQNN-QLY 95 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCC---EEEEEEETTTT-EEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCC---CceEEEcCCCC-cEE
Confidence 35678899999978888889999999887632211000000000 0000 000000112 67799997 54 355
Q ss_pred EEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCC-cccCeeEEEEec-CCCcEEEEEeC-----------------
Q 037120 172 ACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSD-VQKGLSDLAFSA-VNTSRLIASDT----------------- 232 (489)
Q Consensus 172 ~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~-~~~~~l~s~s~----------------- 232 (489)
++.. . +.|..+|..... ...+... ..+ .....+.+++.+ +|. ++++-..
T Consensus 96 v~d~-~-~~i~~~d~~~g~---~~~~~~~------~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~ 163 (322)
T 2fp8_A 96 IVDC-Y-YHLSVVGSEGGH---ATQLATS------VDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDK 163 (322)
T ss_dssp EEET-T-TEEEEECTTCEE---CEEEESE------ETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCC
T ss_pred EEEC-C-CCEEEEeCCCCE---EEEeccc------CCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCC
Confidence 5544 3 557778763111 0111100 011 123578899999 887 6665432
Q ss_pred CCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEe-CCCeEEEEEcCCCcc--cceeecCCccCCCCeeEEE
Q 037120 233 HGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAG-KHGSIYLWDLRGGRT--SAPFHNHKEVCHLPLTSLK 309 (489)
Q Consensus 233 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~lwd~~~~~~--~~~~~~~~~~~~~~v~~l~ 309 (489)
++.|..||..+++.. .....-...+.++++|+++.|+.+. ..+.|..||+..... ...+.. .. . ...++
T Consensus 164 ~g~v~~~d~~~~~~~---~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~---g-P~gi~ 235 (322)
T 2fp8_A 164 TGRLIKYDPSTKETT---LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IP---N-PGNIK 235 (322)
T ss_dssp CEEEEEEETTTTEEE---EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CS---S-EEEEE
T ss_pred CceEEEEeCCCCEEE---EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CC---C-CCCeE
Confidence 367889998765421 1111113456799999999777764 478999999875321 111111 11 1 45566
Q ss_pred eCCCCccee
Q 037120 310 LASMLEKIG 318 (489)
Q Consensus 310 ~~~~~~~i~ 318 (489)
+.++|....
T Consensus 236 ~d~~G~l~v 244 (322)
T 2fp8_A 236 RNADGHFWV 244 (322)
T ss_dssp ECTTSCEEE
T ss_pred ECCCCCEEE
Confidence 777765443
No 239
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.97 E-value=1.2e-06 Score=83.40 Aligned_cols=158 Identities=9% Similarity=0.016 Sum_probs=75.9
Q ss_pred eeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCC
Q 037120 99 ISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRS 178 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~ 178 (489)
+.+..+..++..+++++.||.|+.||..+++..-. ...+........ ..+..+ ..+++++.|
T Consensus 40 ~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~--------~~~~~~~~~~~s-------p~~~~~--~~v~~g~~d- 101 (369)
T 2hz6_A 40 VLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTK--------LPFTIPELVQAS-------PCRSSD--GILYMGKKQ- 101 (369)
T ss_dssp SCCCC-----CCEEECTTTCCEEEC-----CCSEE--------CSCCHHHHHTTC-------SCC-------CCCCEEE-
T ss_pred ceecceEcCCCEEEEeCCCCEEEEEECCCCceeee--------eeccCccccccC-------ceEecC--CEEEEEeCC-
Confidence 33444556777888888999999999987544321 100000000000 011112 245566666
Q ss_pred CEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCc
Q 037120 179 NVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGT 258 (489)
Q Consensus 179 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~ 258 (489)
+.|..||...+... ..+ ..+. ...++|++. .+++++.|+.|+.||.++++.. .+ +.. ..
T Consensus 102 g~v~a~D~~tG~~~--------w~~----~~~~----~~~~~p~~~-~v~~~~~dg~v~a~d~~tG~~~-W~-~~~--~~ 160 (369)
T 2hz6_A 102 DIWYVIDLLTGEKQ--------QTL----SSAF----ADSLSPSTS-LLYLGRTEYTITMYDTKTRELR-WN-ATY--FD 160 (369)
T ss_dssp EEEEEECCC---------------------------------------EEEEEEEEEEECCCSSSSSCC-CE-EEE--EE
T ss_pred CEEEEEECCCCcEE--------EEe----cCCC----cccccccCC-EEEEEecCCEEEEEECCCCCEE-Ee-Eec--cc
Confidence 89999999544211 111 1111 134566676 8888899999999999988632 21 111 11
Q ss_pred eeEEEEeecC---CEEEEEeCCCeEEEEEcCCCcccceee
Q 037120 259 LNSIQLHAEN---QIIFAAGKHGSIYLWDLRGGRTSAPFH 295 (489)
Q Consensus 259 v~~~~~~p~~---~~l~~~~~dg~i~lwd~~~~~~~~~~~ 295 (489)
....+++++. ..+++++.||.|+.||.++|+.+..+.
T Consensus 161 ~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 161 YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 2223333332 567888889999999999998766555
No 240
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.97 E-value=0.0031 Score=65.01 Aligned_cols=78 Identities=15% Similarity=0.196 Sum_probs=52.6
Q ss_pred eEEEEecCCCcEEEEEeCCCc-------------------EEEEECCCCCcCceeecc-CCC-------CceeEEEEeec
Q 037120 215 SDLAFSAVNTSRLIASDTHGV-------------------VNIWDRRVGVLPSLELST-GSH-------GTLNSIQLHAE 267 (489)
Q Consensus 215 ~~~~~~~~~~~~l~s~s~dg~-------------------i~iwd~~~~~~~~~~~~~-~h~-------~~v~~~~~~p~ 267 (489)
..+++.|++. +++.++.++. |..||.++++.. .+... .|. .++.......+
T Consensus 238 ~~~~~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~-W~~~~~~~d~wd~~~~~~~~l~d~~~~ 315 (689)
T 1yiq_A 238 DSFAYDPELN-LLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYV-WHYQTTPGDAWDYTATQHMILAELPID 315 (689)
T ss_dssp SCEEEETTTT-EEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEE-EEEESSTTCCSCCCCCSCEEEEEEEET
T ss_pred cceeEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCcee-EeeecCCcccccccCCCCcEEEeeccC
Confidence 3678888887 8888887763 999999998743 22211 221 12222233345
Q ss_pred CC---EEEEEeCCCeEEEEEcCCCccccee
Q 037120 268 NQ---IIFAAGKHGSIYLWDLRGGRTSAPF 294 (489)
Q Consensus 268 ~~---~l~~~~~dg~i~lwd~~~~~~~~~~ 294 (489)
|+ .++.++.+|.++++|.++|+.+...
T Consensus 316 G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 345 (689)
T 1yiq_A 316 GKPRKVLMQAPKNGFFYVIDRATGELLSAK 345 (689)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred CcEEEEEEEECCCCeEEEEECCCCCEeccc
Confidence 65 6788888999999999999886443
No 241
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.95 E-value=0.00012 Score=72.18 Aligned_cols=73 Identities=5% Similarity=-0.013 Sum_probs=53.3
Q ss_pred CeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCc----------CceeeccCCCCceeEEEEeecCCEEEEEeC-CCeEE
Q 037120 213 GLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVL----------PSLELSTGSHGTLNSIQLHAENQIIFAAGK-HGSIY 281 (489)
Q Consensus 213 ~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~----------~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~ 281 (489)
...++.++|||+..++++..+.+|.++|+.+.+. ...... .-......++|+|+| ++++... |++|.
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~gP~h~aF~~dG-~aY~t~~ldsqV~ 355 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLGPLHTAFDGRG-NAYTSLFLDSQVV 355 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSCEEEEEECTTS-EEEEEETTTTEEE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCCCCcceEEECCCC-eEEEEEecCCcEE
Confidence 4567899999995556666899999999985420 011111 223456789999999 7777766 99999
Q ss_pred EEEcCC
Q 037120 282 LWDLRG 287 (489)
Q Consensus 282 lwd~~~ 287 (489)
+||+.+
T Consensus 356 kwdi~~ 361 (595)
T 1fwx_A 356 KWNIED 361 (595)
T ss_dssp EEEHHH
T ss_pred EEEhhH
Confidence 999986
No 242
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.92 E-value=0.0097 Score=56.24 Aligned_cols=156 Identities=12% Similarity=0.055 Sum_probs=82.8
Q ss_pred CcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCce-eEEEeeCCCCCEEEEEecCCCEEEEEEe
Q 037120 108 GIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQL-DAVRWNLANQDEVACASTRSNVVSIYDI 186 (489)
Q Consensus 108 g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V-~~v~~~~~~~~~l~s~~~d~g~i~vwd~ 186 (489)
+..|.+++.++.|..+|..+++..-.. ........ .+.. ...+ ..+... + ..++.++.+ +.|..+|.
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~------~~~~~~~~-~~~~-~~~~~~~~~~~--~-~~v~v~~~~-g~l~a~d~ 120 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSV------SLAEKDGW-FSKE-PALLSGGVTVS--G-GHVYIGSEK-AQVYALNT 120 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEE------ECCC---C-CSCC-CCCEEEEEEEE--T-TEEEEEETT-SEEEEEET
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeee------cCcccccc-cccc-CcccccCceEe--C-CEEEEEcCC-CEEEEEEC
Confidence 557777888899999999875543210 00000000 0000 0112 222222 2 256666666 99999998
Q ss_pred ccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCce------e
Q 037120 187 GYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTL------N 260 (489)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v------~ 260 (489)
..+. .+-... +.+. ........ +. .++.++.++.|..+|.++++.. . ..... ..+ .
T Consensus 121 ~tG~-----~~W~~~-----~~~~--~~~~p~~~--~~-~v~v~~~~g~l~~~d~~tG~~~-W-~~~~~-~~~~~~~~~~ 182 (376)
T 3q7m_A 121 SDGT-----VAWQTK-----VAGE--ALSRPVVS--DG-LVLIHTSNGQLQALNEADGAVK-W-TVNLD-MPSLSLRGES 182 (376)
T ss_dssp TTCC-----EEEEEE-----CSSC--CCSCCEEE--TT-EEEEECTTSEEEEEETTTCCEE-E-EEECC-C-----CCCC
T ss_pred CCCC-----EEEEEe-----CCCc--eEcCCEEE--CC-EEEEEcCCCeEEEEECCCCcEE-E-EEeCC-CCceeecCCC
Confidence 4432 111111 1111 11111122 34 6778888999999999988632 1 22111 111 1
Q ss_pred EEEEeecCCEEEEEeCCCeEEEEEcCCCcccceee
Q 037120 261 SIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFH 295 (489)
Q Consensus 261 ~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~ 295 (489)
.... .+..+++++.++.|..+|..+++.+....
T Consensus 183 ~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~ 215 (376)
T 3q7m_A 183 APTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQR 215 (376)
T ss_dssp CCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEE
T ss_pred CcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEe
Confidence 2222 24567888889999999999998755544
No 243
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.90 E-value=0.001 Score=69.50 Aligned_cols=160 Identities=11% Similarity=0.060 Sum_probs=90.6
Q ss_pred ceeEEEEC-CCCcEEEEEec-CC----eEEEEeCCCc-ccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 98 GISALDFD-CKGIYLVSATR-SG----CLTVHDFESL-YYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 98 ~V~~~~fs-~~g~~la~g~~-dg----~i~vwd~~~~-~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
.+...+|| |||++||-+.. +| .|+++|+.++ +.... .+ ... ...++|+|+++.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-------~~---~~~---------~~~~~WspDg~~l 235 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-------KV---SGT---------NGEIVWGPDHTSL 235 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-------CE---EEE---------CSCCEECSSTTEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-------cc---cCc---------eeeEEEecCCCEE
Confidence 47889999 99999986654 23 5999999885 32110 00 001 2348999999866
Q ss_pred EEEEecCC---CEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe---CCCcEEEEECCCC
Q 037120 171 VACASTRS---NVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD---THGVVNIWDRRVG 244 (489)
Q Consensus 171 l~s~~~d~---g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s---~dg~i~iwd~~~~ 244 (489)
+++...+. ..|.++++.........+.. ..+......+.|+||++ .|+..+ ....|+++|+.++
T Consensus 236 ~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~---------~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 236 FYVTKDETLRENKVWRHVMGKLQSEDVCLYE---------EHNPLFSAFMYKAADTN-TLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEEECTTCCEEEEEEEETTSCGGGCEEEEE---------CCCTTCEEEEEECTTSS-EEEEEEECSSCEEEEEEESSSC
T ss_pred EEEEECCCCCCCEEEEEECCCCchhcEEEEe---------cCCCceEEEEEECCCCC-EEEEEecCCCCceEEEEECCCC
Confidence 66654221 25777777432111111111 11223456789999999 554443 3446888999875
Q ss_pred CcCc--eeeccCCCCceeEEEEeecCCEEEEEeC-C----CeEEEEEcCC
Q 037120 245 VLPS--LELSTGSHGTLNSIQLHAENQIIFAAGK-H----GSIYLWDLRG 287 (489)
Q Consensus 245 ~~~~--~~~~~~h~~~v~~~~~~p~~~~l~~~~~-d----g~i~lwd~~~ 287 (489)
.... ............++.|+. |..|+..+. + ..|..+|+.+
T Consensus 306 ~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 306 NAHNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TTCCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCCceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 3222 222223344455555544 555444443 3 3677778765
No 244
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.89 E-value=0.00037 Score=71.75 Aligned_cols=78 Identities=12% Similarity=0.124 Sum_probs=53.9
Q ss_pred CcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCC
Q 037120 234 GVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASM 313 (489)
Q Consensus 234 g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 313 (489)
|.|..||+.+++.. .+. .+..++....+...+..+++++.||.+++||.++++.+..+....... -.-+.|..+
T Consensus 457 g~l~A~D~~tG~~~-W~~--~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~---~~p~~y~~~ 530 (677)
T 1kb0_A 457 GRLLAWDPVAQKAA-WSV--EHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVV---AAPSTYMVD 530 (677)
T ss_dssp EEEEEEETTTTEEE-EEE--EESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC---SCCEEEEET
T ss_pred cEEEEEeCCCCcEE-eec--CCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcc---cCCEEEEeC
Confidence 78999999998632 222 233445556677888899999889999999999999988887433221 223445566
Q ss_pred Ccce
Q 037120 314 LEKI 317 (489)
Q Consensus 314 ~~~i 317 (489)
|+.+
T Consensus 531 G~~~ 534 (677)
T 1kb0_A 531 GRQY 534 (677)
T ss_dssp TEEE
T ss_pred CEEE
Confidence 6533
No 245
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.89 E-value=0.00026 Score=73.11 Aligned_cols=79 Identities=14% Similarity=0.157 Sum_probs=53.9
Q ss_pred CCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCC
Q 037120 233 HGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLAS 312 (489)
Q Consensus 233 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 312 (489)
+|.|..||+.+++.. .+ .. +..++....+...+.++++++.||.|+.||.++|+.+..++...... -.-+.|..
T Consensus 454 ~g~l~A~D~~tG~~~-W~-~~-~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~---~~p~ty~~ 527 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAA-WE-VP-YVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVM---AAPVTYSV 527 (689)
T ss_dssp EEEEEEEETTTTEEE-EE-EE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC---SCCEEEEE
T ss_pred ceeEEEEECCCCCeE-eE-cc-CCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcc---cCceEEEE
Confidence 378999999998632 22 21 22334444667788899999999999999999999988887543321 12345566
Q ss_pred CCcce
Q 037120 313 MLEKI 317 (489)
Q Consensus 313 ~~~~i 317 (489)
+|+..
T Consensus 528 ~G~qy 532 (689)
T 1yiq_A 528 DGEQY 532 (689)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 77543
No 246
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.86 E-value=0.0007 Score=62.70 Aligned_cols=168 Identities=8% Similarity=-0.007 Sum_probs=92.3
Q ss_pred EEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCCCE
Q 037120 101 ALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRSNV 180 (489)
Q Consensus 101 ~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~ 180 (489)
+..++.+|. |..|+.++.|..|| .+.+..-. ....... +.++...+++ .+..++ .+
T Consensus 24 ~~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~--------~~~~~~~---------~~~~~~~~~g--~l~v~t--~~- 79 (330)
T 3hxj_A 24 SPILAKNGT-IYLGSSNKNLYAIN-TDGSVKWF--------FKSGEII---------ECRPSIGKDG--TIYFGS--DK- 79 (330)
T ss_dssp CCEECTTSC-EECSSTTTTTEEEC-TTSCEEES--------SCGGGEE---------EECCEETTTT--EECCSS--CE-
T ss_pred CceEccCCe-EEEEcCCCEEEEEC-CCCcEEEE--------EecCCCc---------ccceEEecCC--cEEEec--Cc-
Confidence 345556664 55566788888899 65433221 1111111 4556666554 454454 35
Q ss_pred EEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCcee
Q 037120 181 VSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLN 260 (489)
Q Consensus 181 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~ 260 (489)
|..+|.. +. .+... ...........+. +. .+..++.++.|..+|.. ++. ......+...+.
T Consensus 80 l~~~d~~-g~-----~~~~~-------~~~~~~~~~~~~~--~~-~l~v~t~~~~l~~~d~~-g~~--~~~~~~~~~~~~ 140 (330)
T 3hxj_A 80 VYAINPD-GT-----EKWRF-------DTKKAIVSDFTIF--ED-ILYVTSMDGHLYAINTD-GTE--KWRFKTKKAIYA 140 (330)
T ss_dssp EEEECCC-GG-----GGGGS-------CC-----CCEEEE--TT-EEEEECTTSEEEEECTT-SCE--EEEEECSSCCCS
T ss_pred EEEECCC-Cc-----EEEEE-------ECCCCcccCceEE--CC-EEEEEecCCEEEEEcCC-CCE--EEEEcCCCceee
Confidence 7777751 11 11000 0011112223333 33 67778889999999988 552 222223344566
Q ss_pred EEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcce
Q 037120 261 SIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKI 317 (489)
Q Consensus 261 ~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i 317 (489)
++...+++. ++.++.++.|..||.. ++.+..+...... +.++...+++...
T Consensus 141 ~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~----~~~~~~d~~g~l~ 191 (330)
T 3hxj_A 141 TPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAI----TSAASIGKDGTIY 191 (330)
T ss_dssp CCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCC----CSCCEECTTCCEE
T ss_pred eeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCc----eeeeEEcCCCEEE
Confidence 777777776 5667778999999998 7665555433333 5556666665544
No 247
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.81 E-value=0.0035 Score=55.22 Aligned_cols=79 Identities=13% Similarity=0.117 Sum_probs=56.5
Q ss_pred CeeEEEEecCCCcEEEEEeCCC--cEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCCCc
Q 037120 213 GLSDLAFSAVNTSRLIASDTHG--VVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRGGR 289 (489)
Q Consensus 213 ~v~~~~~~~~~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~~ 289 (489)
-...+.|+ ++. ++.+.+.+| .|+++|+.+++ .+....- ........+.+++..|+.... ++.+.+||..+++
T Consensus 44 ftqGL~~~-~~~-LyestG~~g~S~v~~vD~~Tgk--v~~~~~l-~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 44 FTEGFFYR-NGY-FYESTGLNGRSSIRKVDIESGK--TLQQIEL-GKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEEEE-TTE-EEEEEEETTEEEEEEECTTTCC--EEEEEEC-CTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCC
T ss_pred ccceEEEE-CCE-EEEECCCCCCceEEEEECCCCc--EEEEEec-CCccceeEEEEeCCEEEEEEeeCCEEEEEECccCc
Confidence 34778888 565 777777766 89999999987 4433322 233444444456777777765 9999999999999
Q ss_pred ccceeec
Q 037120 290 TSAPFHN 296 (489)
Q Consensus 290 ~~~~~~~ 296 (489)
.+.++..
T Consensus 119 ~~~ti~~ 125 (262)
T 3nol_A 119 QVRSFNY 125 (262)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 8888774
No 248
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.77 E-value=0.0021 Score=56.70 Aligned_cols=78 Identities=9% Similarity=0.129 Sum_probs=54.7
Q ss_pred CeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCCCccc
Q 037120 213 GLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRGGRTS 291 (489)
Q Consensus 213 ~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~~~~ 291 (489)
-...+.|. ++. ++.+.+.+|.|+++|+.+++. ++... .......-..+++..|+.... ++.+.+||..+++.+
T Consensus 56 ftqGL~~~-~~~-Ly~stG~~g~v~~iD~~Tgkv--~~~~l--~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 56 FTQGLVFH-QGH-FFESTGHQGTLRQLSLESAQP--VWMER--LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp CEEEEEEE-TTE-EEEEETTTTEEEECCSSCSSC--SEEEE--CTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEE
T ss_pred ccceEEEE-CCE-EEEEcCCCCEEEEEECCCCcE--EeEEC--CCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEE
Confidence 44678887 344 788888999999999999873 33322 223333333445666666654 999999999999888
Q ss_pred ceeec
Q 037120 292 APFHN 296 (489)
Q Consensus 292 ~~~~~ 296 (489)
.++..
T Consensus 130 ~ti~~ 134 (268)
T 3nok_A 130 RTTRY 134 (268)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 77774
No 249
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.73 E-value=0.0013 Score=67.61 Aligned_cols=117 Identities=11% Similarity=0.003 Sum_probs=69.1
Q ss_pred EEEECC-CCcEEEEEecCC-----------eEEEEeCCCcccccCCCCCCCCCccccccc-ccCCCCCCceeEEEeeCCC
Q 037120 101 ALDFDC-KGIYLVSATRSG-----------CLTVHDFESLYYQCNGTLPGVGLKEDQSKH-LLHIPLPQQLDAVRWNLAN 167 (489)
Q Consensus 101 ~~~fs~-~g~~la~g~~dg-----------~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~-~~h~~~~~~V~~v~~~~~~ 167 (489)
++++.+ +|++++.|+.+. .+.+||..+..-... ... ..+... ..++++..++
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~------------~~~~~~~~~~---~~~~~~~~~g 254 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDR------------TVTVTKHDMF---CPGISMDGNG 254 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCC------------EEEECSCCCS---SCEEEECTTS
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeC------------cccCCCCCCc---cccccCCCCC
Confidence 556677 899999988643 578899887433221 000 011111 3346777777
Q ss_pred CCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe-CC-----CcEEEEEC
Q 037120 168 QDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD-TH-----GVVNIWDR 241 (489)
Q Consensus 168 ~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s-~d-----g~i~iwd~ 241 (489)
. +++.|+.++..+.+||..... ...... +.. ...-.+++..++++ +++.|+ .+ ..+.+||.
T Consensus 255 ~-lyv~GG~~~~~v~~yd~~t~~------W~~~~~----~~~-~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 255 Q-IVVTGGNDAKKTSLYDSSSDS------WIPGPD----MQV-ARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp C-EEEECSSSTTCEEEEEGGGTE------EEECCC----CSS-CCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEET
T ss_pred C-EEEeCCCCCCceEEecCcCCc------eeECCC----CCc-cccccceEEecCCe-EEEEeCcccCCcccccceEeCC
Confidence 5 777777554789999984321 111110 111 11223455667888 888888 44 57999999
Q ss_pred CCCC
Q 037120 242 RVGV 245 (489)
Q Consensus 242 ~~~~ 245 (489)
.+.+
T Consensus 322 ~t~~ 325 (656)
T 1k3i_A 322 SSKT 325 (656)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 8765
No 250
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.70 E-value=0.029 Score=51.29 Aligned_cols=157 Identities=11% Similarity=-0.023 Sum_probs=88.7
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
.....++|+++|+++++-..++.|..||........ . .. ......+++.+++. ++++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~---------~-~~---------~~~p~gia~~~dG~-l~vad~~ 91 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIH---------A-TV---------EGKVSGLAFTSNGD-LVATGWN 91 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEE---------E-EC---------SSEEEEEEECTTSC-EEEEEEC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEE---------E-eC---------CCCceeEEEcCCCc-EEEEecc
Confidence 346789999999988877788999999877521111 0 00 01277799999986 6655542
Q ss_pred CC-CEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCcee-----
Q 037120 177 RS-NVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLE----- 250 (489)
Q Consensus 177 d~-g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~----- 250 (489)
.+ ..|..+|...+ .. ..+... . .......++..+.+. .+++-..++.|..+|...+......
T Consensus 92 ~~~~~v~~~d~~~g--~~-~~~~~~-------~-~~~~~~g~~~~~~~~-~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~ 159 (306)
T 2p4o_A 92 ADSIPVVSLVKSDG--TV-ETLLTL-------P-DAIFLNGITPLSDTQ-YLTADSYRGAIWLIDVVQPSGSIWLEHPML 159 (306)
T ss_dssp TTSCEEEEEECTTS--CE-EEEEEC-------T-TCSCEEEEEESSSSE-EEEEETTTTEEEEEETTTTEEEEEEECGGG
T ss_pred CCcceEEEEcCCCC--eE-EEEEeC-------C-CccccCcccccCCCc-EEEEECCCCeEEEEeCCCCcEeEEEECCcc
Confidence 21 24666665322 11 111110 1 112234455444443 4555546889999998653211110
Q ss_pred ---eccCCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCC
Q 037120 251 ---LSTGSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRG 287 (489)
Q Consensus 251 ---~~~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~ 287 (489)
.....-...+.+ +|++.+|+.+.. .+.|..||+..
T Consensus 160 ~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 160 ARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp SCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCT
T ss_pred ccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCC
Confidence 000111233455 889888777765 78999999874
No 251
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.69 E-value=0.039 Score=52.39 Aligned_cols=182 Identities=12% Similarity=-0.051 Sum_probs=103.9
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
.+..|.+..+.+ +|+.+. ...|+..++....... ..... .. ...++|.+....++++-..
T Consensus 77 d~~~C~~~~~~~-~l~~~~-~~~I~~i~~~~~~~~~---------~~~~~------~~---~~gl~~d~~~~~ly~~D~~ 136 (386)
T 3v65_B 77 DRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTL---------LLNNL------EN---AIALDFHHRRELVFWSDVT 136 (386)
T ss_dssp TSSCEEECSSCC-EEEEEC-BSCEEEECTTSCCCEE---------EECSC------SC---EEEEEEETTTTEEEEEETT
T ss_pred CCCeECCccccc-eeEeec-CccceeeccCCCcEEE---------EecCC------Cc---cEEEEEecCCCeEEEEeCC
Confidence 345677766755 343333 3568888877632211 11111 11 6779999877666666655
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCC
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSH 256 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~ 256 (489)
. +.|..+++.... . ..+. .........+++.+.+.+++++-...+.|.+.++..... .......-
T Consensus 137 ~-~~I~r~~~~g~~--~-~~~~---------~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~--~~l~~~~l 201 (386)
T 3v65_B 137 L-DRILRANLNGSN--V-EEVV---------STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR--KVLLWQSL 201 (386)
T ss_dssp T-TEEEEEETTSCC--E-EEEE---------CSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC--EEEECSSC
T ss_pred C-CcEEEEecCCCC--c-EEEE---------eCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce--EEeecCCC
Confidence 5 899999984221 0 1110 111124567888887664666666778899998875431 11222223
Q ss_pred CceeEEEEeecCCEEEEEeC-C-CeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcce
Q 037120 257 GTLNSIQLHAENQIIFAAGK-H-GSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKI 317 (489)
Q Consensus 257 ~~v~~~~~~p~~~~l~~~~~-d-g~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i 317 (489)
.....++++|.+..|+.+.. . +.|..+++............-.. .+.|+|+|++..+
T Consensus 202 ~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~----PnGlavd~~~~~l 260 (386)
T 3v65_B 202 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFW----PNGLTIDYAGRRM 260 (386)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSC----EEEEEEEGGGTEE
T ss_pred CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCC----eeeEEEeCCCCEE
Confidence 55789999998877777654 4 78888888653221111111112 4666666655433
No 252
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.58 E-value=0.036 Score=48.94 Aligned_cols=174 Identities=11% Similarity=0.126 Sum_probs=100.4
Q ss_pred cccCCCceeEEEECCCCc-EEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCE
Q 037120 92 RSFGKPGISALDFDCKGI-YLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDE 170 (489)
Q Consensus 92 ~~~~~~~V~~~~fs~~g~-~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~ 170 (489)
+..-...+..++|+|++. ++++...++.|...|.. +...... .+.+. ...-.|++.+++. +
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i------------~l~g~----~D~EGIa~~~~g~-~ 83 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTI------------PLDFV----KDLETIEYIGDNQ-F 83 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEE------------ECSSC----SSEEEEEECSTTE-E
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEE------------ecCCC----CChHHeEEeCCCE-E
Confidence 444445699999999865 55557778888888887 3333311 11111 1155688887764 4
Q ss_pred EEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCC--CCcCc
Q 037120 171 VACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRV--GVLPS 248 (489)
Q Consensus 171 l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~--~~~~~ 248 (489)
+++...+ +.+.++++..... ...+.... +.............|+|.|.++ .|+++.......+|.+.. ... .
T Consensus 84 ~vs~E~~-~~l~~~~v~~~~~--i~~~~~~~-~~~~~~~~N~g~EGLA~d~~~~-~L~va~E~~p~~i~~~~g~~~~~-~ 157 (255)
T 3qqz_A 84 VISDERD-YAIYVISLTPNSE--VKILKKIK-IPLQESPTNCGFEGLAYSRQDH-TFWFFKEKNPIEVYKVNGLLSSN-E 157 (255)
T ss_dssp EEEETTT-TEEEEEEECTTCC--EEEEEEEE-CCCSSCCCSSCCEEEEEETTTT-EEEEEEESSSEEEEEEESTTCSS-C
T ss_pred EEEECCC-CcEEEEEcCCCCe--eeeeeeec-cccccccccCCcceEEEeCCCC-EEEEEECcCCceEEEEcccccCC-c
Confidence 4444444 8999999854321 11111111 0000123456789999999998 566566444444444431 110 1
Q ss_pred eeec-------cCCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCCCcc
Q 037120 249 LELS-------TGSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRGGRT 290 (489)
Q Consensus 249 ~~~~-------~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~~~ 290 (489)
+... ..+...+.+++++|....+++.+. ...|..+|.. ++.
T Consensus 158 l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~ 206 (255)
T 3qqz_A 158 LHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEV 206 (255)
T ss_dssp CEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCE
T ss_pred eeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCE
Confidence 1111 112345789999997776666666 8889999966 444
No 253
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.55 E-value=0.036 Score=48.31 Aligned_cols=118 Identities=8% Similarity=-0.013 Sum_probs=71.2
Q ss_pred eeEEEeeCCCCCEEEEEecC-CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcE
Q 037120 158 LDAVRWNLANQDEVACASTR-SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVV 236 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d-~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i 236 (489)
...+.|+. + .++.+.+.+ ...|+++|+..+ +++.... +.. ........+.+..++...-.++.+
T Consensus 23 tqGL~~~~-~-~LyestG~~g~S~v~~vD~~tg-----kv~~~~~-----l~~---~~fgeGi~~~~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 23 TEGLFYLR-G-HLYESTGETGRSSVRKVDLETG-----RILQRAE-----VPP---PYFGAGIVAWRDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEEEEET-T-EEEEEECCTTSCEEEEEETTTC-----CEEEEEE-----CCT---TCCEEEEEEETTEEEEEESSSSEE
T ss_pred cccEEEEC-C-EEEEECCCCCCceEEEEECCCC-----CEEEEEe-----CCC---CcceeEEEEeCCEEEEEEeeCCEE
Confidence 55689987 3 466666654 149999999443 3333222 111 222222223345355555588999
Q ss_pred EEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceee
Q 037120 237 NIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFH 295 (489)
Q Consensus 237 ~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~ 295 (489)
.+||..+.+ .+..+... .. ...+.+++..|+.+..++.|.++|..+.+.+..+.
T Consensus 88 ~v~D~~tl~--~~~ti~~~-~~--Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 88 FVYDLATLT--PRARFRYP-GE--GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp EEEETTTTE--EEEEEECS-SC--CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred EEEECCcCc--EEEEEeCC-CC--ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEE
Confidence 999999876 44444321 11 23344677777777668899999999877655554
No 254
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.53 E-value=0.058 Score=50.34 Aligned_cols=156 Identities=13% Similarity=-0.012 Sum_probs=94.5
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
.+..|.+..+++.+++ +. ...|+..++....... ... .... ...++|++....++.+-..
T Consensus 34 d~~~C~~~~~~~~ll~-~~-~~~I~~i~~~g~~~~~---------~~~------~~~~---~~~l~~d~~~~~ly~~D~~ 93 (349)
T 3v64_C 34 DRRSCKALGPEPVLLF-AN-RIDIRQVLPHRSEYTL---------LLN------NLEN---AIALDFHHRRELVFWSDVT 93 (349)
T ss_dssp TSSCEEESSSCCEEEE-EC-BSCEEEECTTSCCEEE---------EEC------SCSC---EEEEEEETTTTEEEEEETT
T ss_pred CCCcccccccCceeEe-ec-ccceEEEeCCCCeeEE---------eec------CCCc---eEEEEEeccccEEEEEecc
Confidence 4566777777554433 33 3457777776522211 001 1111 6779999877666666655
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCC
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSH 256 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~ 256 (489)
. +.|..+++.... ....+ .........+++.+.+.+++++-...+.|.+.++....... .....-
T Consensus 94 ~-~~I~r~~~~g~~--~~~~~----------~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~--l~~~~l 158 (349)
T 3v64_C 94 L-DRILRANLNGSN--VEEVV----------STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV--LLWQSL 158 (349)
T ss_dssp T-TEEEEEETTSCS--CEEEE----------CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE--EECTTC
T ss_pred C-CceEEEecCCCC--ceEEE----------eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE--EEeCCC
Confidence 5 899999984321 10111 11112457889988666466776678899999987543211 222223
Q ss_pred CceeEEEEeecCCEEEEEeC-C-CeEEEEEcCC
Q 037120 257 GTLNSIQLHAENQIIFAAGK-H-GSIYLWDLRG 287 (489)
Q Consensus 257 ~~v~~~~~~p~~~~l~~~~~-d-g~i~lwd~~~ 287 (489)
.....++++|.+..|+.+.. . +.|..+++..
T Consensus 159 ~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG 191 (349)
T 3v64_C 159 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 191 (349)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCcceEEEecCcCeEEEeccCCCCEEEEEeCCC
Confidence 45689999997777776654 4 7899888875
No 255
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.45 E-value=0.053 Score=50.64 Aligned_cols=159 Identities=9% Similarity=-0.011 Sum_probs=98.8
Q ss_pred CceeEEEECCCCc-EEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEe
Q 037120 97 PGISALDFDCKGI-YLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAS 175 (489)
Q Consensus 97 ~~V~~~~fs~~g~-~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~ 175 (489)
.....++|++.+. ++.+-...+.|..++.+....... .. ..... ...+++.+.+..++++-.
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~--------~~------~~~~~---p~glavd~~~g~ly~~d~ 135 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV--------VS------TGLES---PGGLAVDWVHDKLYWTDS 135 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE--------EC------SSCSC---CCEEEEETTTTEEEEEET
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEE--------Ee------CCCCC---ccEEEEecCCCeEEEEcC
Confidence 3478999997554 445555678899998876321110 00 00112 445888887666777766
Q ss_pred cCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCC-CcEEEEECCCCCcCceeeccC
Q 037120 176 TRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTH-GVVNIWDRRVGVLPSLELSTG 254 (489)
Q Consensus 176 ~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~d-g~i~iwd~~~~~~~~~~~~~~ 254 (489)
.. +.|.+.++.... ...+. ...-...+.+++.|.+..++++-... +.|...++....... ....
T Consensus 136 ~~-~~I~~~~~dG~~---~~~l~---------~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~--~~~~ 200 (349)
T 3v64_C 136 GT-SRIEVANLDGAH---RKVLL---------WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI--IADT 200 (349)
T ss_dssp TT-TEEEEEETTSCS---CEEEE---------CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE--SCCS
T ss_pred CC-CeEEEEcCCCCc---eEEEE---------eCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEE--EEEC
Confidence 66 899999984221 11111 11223568899999776455665555 789999887533111 1112
Q ss_pred CCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCC
Q 037120 255 SHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRG 287 (489)
Q Consensus 255 h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~ 287 (489)
.-...+.++++|++..|+.+.. .+.|..+|+..
T Consensus 201 ~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 201 HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 2345689999998887777755 78899999875
No 256
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.37 E-value=0.011 Score=61.70 Aligned_cols=72 Identities=10% Similarity=0.066 Sum_probs=49.3
Q ss_pred CeeEEEEe-cCCCcEEEE-EeCCC----cEEEEECCCC-CcCceeeccCCCCceeEEEEeecCCEEEEEeCC-----CeE
Q 037120 213 GLSDLAFS-AVNTSRLIA-SDTHG----VVNIWDRRVG-VLPSLELSTGSHGTLNSIQLHAENQIIFAAGKH-----GSI 280 (489)
Q Consensus 213 ~v~~~~~~-~~~~~~l~s-~s~dg----~i~iwd~~~~-~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----g~i 280 (489)
.+...+|+ |||+ +|+. .+.+| .|+++|+.++ +.. ...+ ......++|+|||+.|+....| ..|
T Consensus 175 ~~~~~~~S~PDG~-~lAy~~~~~G~~~~~l~v~dl~~g~~~l-~~~~---~~~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHD-LVAFSVDMSGNEVYTIEFKRISDPSQTI-ADKV---SGTNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTC-EEEEEEESSSSSCEEEEEEETTCTTCCC-CCCE---EEECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCC-EEEEEEeCCCCceEEEEEEECCCCCEeC-Cccc---cCceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 57788999 9999 5554 33333 4999999987 521 1111 1224578999999988887664 368
Q ss_pred EEEEcCCCc
Q 037120 281 YLWDLRGGR 289 (489)
Q Consensus 281 ~lwd~~~~~ 289 (489)
+++++.++.
T Consensus 250 ~~~~lgt~~ 258 (751)
T 2xe4_A 250 WRHVMGKLQ 258 (751)
T ss_dssp EEEETTSCG
T ss_pred EEEECCCCc
Confidence 888887764
No 257
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.35 E-value=0.21 Score=52.41 Aligned_cols=195 Identities=8% Similarity=0.056 Sum_probs=113.9
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
..|.++..+++|.+.+ |+.+ -|.+||..+........ .+......... .|.++...+++. +-.|+.
T Consensus 263 ~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~-------~~~~~~~l~~~---~i~~i~~D~~g~--lWigt~ 328 (795)
T 4a2l_A 263 NYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSS-------NPVENGSLSQR---SVRSIFMDSQGG--MWLGTY 328 (795)
T ss_dssp SBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECC-------CTTSTTSCSSS---CEEEEEECTTSC--EEEEES
T ss_pred CeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEec-------CCCCCCCCCCC---cEEEEEEeCCcC--EEEEEC
Confidence 4599999999987655 4555 58889887644332110 00000011112 288898888764 444554
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeecc---
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELST--- 253 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--- 253 (489)
+ +-|..|+.....- ..+..... ...-....|.++...++|. |..|+.++-|..||..++. ......
T Consensus 329 ~-~Gl~~~~~~~~~~---~~~~~~~~---~~~l~~~~V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~~~--~~~~~~~~~ 397 (795)
T 4a2l_A 329 F-GGLNYYHPIRNRF---KNIRNIPY---KNSLSDNVVSCIVEDKDKN--LWIGTNDGGLNLYNPITQR--FTSYTLQED 397 (795)
T ss_dssp S-SCEEEECGGGGSS---EEECCCTT---SSSCSCSSEEEEEECTTSC--EEEEESSSCEEEECTTTCC--EEEECCC--
T ss_pred C-CCeEEeCCCcccc---eEEcCCCC---CCCCCCCeeEEEEECCCCC--EEEEECCCCeEEEcCCCCc--EEEEecCCC
Confidence 4 6788888632210 01100000 0011235689998887776 6668878889999988754 221111
Q ss_pred -----CCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeec-CCccCCCCeeEEEeCCCCcce
Q 037120 254 -----GSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHN-HKEVCHLPLTSLKLASMLEKI 317 (489)
Q Consensus 254 -----~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~i 317 (489)
-....|.++...+++..|.+|+.++-|.+||..+++. ..+.. ........|.++...++|...
T Consensus 398 ~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~lw 466 (795)
T 4a2l_A 398 ESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV-ENFNQRNSQLVNENVYAILPDGEGNLW 466 (795)
T ss_dssp ----CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE-EEECTTTSCCSCSCEEEEEECSSSCEE
T ss_pred CcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE-EEeecCCCCcCCCeeEEEEECCCCCEE
Confidence 1235789999998888567777777799999987653 22221 000001238888888887654
No 258
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.34 E-value=0.039 Score=52.36 Aligned_cols=159 Identities=9% Similarity=-0.003 Sum_probs=97.7
Q ss_pred CceeEEEECCCC-cEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEe
Q 037120 97 PGISALDFDCKG-IYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAS 175 (489)
Q Consensus 97 ~~V~~~~fs~~g-~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~ 175 (489)
.....++|++.+ .++.+-...+.|..++.+....... . ...... ...+++.+.+..++++-.
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~--------~------~~~~~~---p~glavd~~~g~lY~~d~ 178 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV--------V------STGLES---PGGLAVDWVHDKLYWTDS 178 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE--------E------CSSCSC---CCCEEEETTTTEEEEEET
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE--------E------eCCCCC---ccEEEEEeCCCeEEEEcC
Confidence 447889999754 4555555678899998876321110 0 000112 334888877666777766
Q ss_pred cCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCC-CcEEEEECCCCCcCceeeccC
Q 037120 176 TRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTH-GVVNIWDRRVGVLPSLELSTG 254 (489)
Q Consensus 176 ~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~d-g~i~iwd~~~~~~~~~~~~~~ 254 (489)
.. +.|.+.++... . ...+. .........|++.|.+..++++-... +.|...++....... ....
T Consensus 179 ~~-~~I~~~~~dg~--~-~~~l~---------~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~--~~~~ 243 (386)
T 3v65_B 179 GT-SRIEVANLDGA--H-RKVLL---------WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI--IADT 243 (386)
T ss_dssp TT-TEEEECBTTSC--S-CEEEE---------CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE--EECS
T ss_pred CC-CeEEEEeCCCC--c-eEEee---------cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEE--EEEC
Confidence 55 78888887321 1 11111 11223568899999777455555555 788888887543211 2222
Q ss_pred CCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCC
Q 037120 255 SHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRG 287 (489)
Q Consensus 255 h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~ 287 (489)
.-...+.|+|+|++..|+.+.. .+.|..+|+..
T Consensus 244 ~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 244 HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 2344689999998887777755 78899999864
No 259
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.33 E-value=0.03 Score=57.39 Aligned_cols=79 Identities=15% Similarity=0.264 Sum_probs=53.3
Q ss_pred eEEEEecCCCcEEEEEeCCC-------------------cEEEEECCCCCcCceeecc-CCC-------CceeEEEEeec
Q 037120 215 SDLAFSAVNTSRLIASDTHG-------------------VVNIWDRRVGVLPSLELST-GSH-------GTLNSIQLHAE 267 (489)
Q Consensus 215 ~~~~~~~~~~~~l~s~s~dg-------------------~i~iwd~~~~~~~~~~~~~-~h~-------~~v~~~~~~p~ 267 (489)
..+++.|+.. +++.++.++ .|..+|.++++.. .+... .|. .+.....+..+
T Consensus 233 ~~~a~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~-W~~~~~~~~~wd~~~~~~~~~~d~~~~ 310 (668)
T 1kv9_A 233 DSMAYDPELD-LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLA-WHYQVTPGDSWDFTATQQITLAELNID 310 (668)
T ss_dssp SCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEE-EEEESSTTCCSCCCCCSCEEEEEEEET
T ss_pred cceEEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCcee-eEeecCCCccccccCCCCcEEEEeccC
Confidence 3578888877 777777665 3999999998743 22211 222 23333334446
Q ss_pred CC---EEEEEeCCCeEEEEEcCCCcccceee
Q 037120 268 NQ---IIFAAGKHGSIYLWDLRGGRTSAPFH 295 (489)
Q Consensus 268 ~~---~l~~~~~dg~i~lwd~~~~~~~~~~~ 295 (489)
|+ .++.++.+|.++++|..+|+.+..++
T Consensus 311 G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 311 GKPRKVLMQAPKNGFFYVLDRTNGKLISAEK 341 (668)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred CcEEEEEEEECCCCEEEEEECCCCCEecccc
Confidence 65 67888889999999999998765544
No 260
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.31 E-value=0.013 Score=56.50 Aligned_cols=158 Identities=15% Similarity=0.055 Sum_probs=92.9
Q ss_pred ceeEEEECC-CCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 98 GISALDFDC-KGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 98 ~V~~~~fs~-~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
....++++| ++..|..+...+.|+++|........ +.. .... ...++|++++..++++...
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~---------~~~------~~~~---P~~ia~d~~G~~lyvad~~ 199 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST---------VYS------GLSK---VRTICWTHEADSMIITNDQ 199 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE---------EEC------CCSC---EEEEEECTTSSEEEEEECC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE---------Eec------CCCC---cceEEEeCCCCEEEEEeCC
Confidence 467889998 34455555555889999987733222 111 1111 6679999998756665542
Q ss_pred CC--C-EEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEec-CCCcEEEEEeCCCcEEEEECCCCCcCceeec
Q 037120 177 RS--N-VVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSA-VNTSRLIASDTHGVVNIWDRRVGVLPSLELS 252 (489)
Q Consensus 177 d~--g-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 252 (489)
+. . .+.+.+. .+.......+. . ......+++.| ++. ++++-..++.|..+|...+....+...
T Consensus 200 ~~~~~~~v~~~~~-~g~~~~~~~l~-------~----~~~p~giavdp~~g~-lyv~d~~~~~V~~~~~~~~~~~~~~~~ 266 (430)
T 3tc9_A 200 NNNDRPNNYILTR-ESGFKVITELT-------K----GQNCNGAETHPINGE-LYFNSWNAGQVFRYDFTTQETTPLFTI 266 (430)
T ss_dssp SCTTSEEEEEEEG-GGTSCSEEEEE-------E----CSSCCCEEECTTTCC-EEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred CCcccceEEEEeC-CCceeeeeeec-------c----CCCceEEEEeCCCCE-EEEEECCCCEEEEEECCCCcEEEEEEc
Confidence 20 1 3333443 22111111111 1 12456788999 555 666666788999999886542111111
Q ss_pred cCCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCC
Q 037120 253 TGSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRG 287 (489)
Q Consensus 253 ~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~ 287 (489)
........++|+|++++|+.+.. .+.|..+|...
T Consensus 267 -~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 267 -QDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp -SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred -CCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 12234678999999996666654 88999988763
No 261
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.31 E-value=0.078 Score=46.76 Aligned_cols=225 Identities=12% Similarity=0.111 Sum_probs=117.1
Q ss_pred cCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeecc-CCCCceeEEEEeecCCEEEEEeCCCeEEEEEc
Q 037120 207 GSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELST-GSHGTLNSIQLHAENQIIFAAGKHGSIYLWDL 285 (489)
Q Consensus 207 ~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~ 285 (489)
+.+-...+..++|.|++..+++....++.|...|.. ++ .++.+. .-......|++.+++.++++.-.++.+.++++
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~--v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GD--LIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CC--EEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CC--EEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 355556799999999877355556688899999987 55 343332 22245778899988887666545889999998
Q ss_pred CCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCCCCCeEEEEEecCCceEEEEeecccee-
Q 037120 286 RGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDPSCSYQLAFHLDDGWSGVLDVYNSRVS- 364 (489)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~w~~~~~~~~~~~~- 364 (489)
.....+.... .+.+. + ...........++++|.+..+.+....+. ..++... +...
T Consensus 99 ~~~~~i~~~~-----------~~~~~--------~--~~~~~N~g~EGLA~d~~~~~L~va~E~~p-~~i~~~~-g~~~~ 155 (255)
T 3qqz_A 99 TPNSEVKILK-----------KIKIP--------L--QESPTNCGFEGLAYSRQDHTFWFFKEKNP-IEVYKVN-GLLSS 155 (255)
T ss_dssp CTTCCEEEEE-----------EEECC--------C--SSCCCSSCCEEEEEETTTTEEEEEEESSS-EEEEEEE-STTCS
T ss_pred CCCCeeeeee-----------eeccc--------c--ccccccCCcceEEEeCCCCEEEEEECcCC-ceEEEEc-ccccC
Confidence 7643211111 11000 0 00011223455566666555555433322 1122211 1000
Q ss_pred ---eecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCCCCCCeeeccCcccchhhHhhhhccc
Q 037120 365 ---HVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPGSSSPSHVDYNEDIESLSERTKLKKE 441 (489)
Q Consensus 365 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (489)
++... ..+.. .........+++.|..+.+++...+.+.|.++|.... .+..+.........
T Consensus 156 ~~l~i~~~-~~~~~----~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-----------~~~~~~L~~g~~~l 219 (255)
T 3qqz_A 156 NELHISKD-KALQR----QFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-----------VIGEMSLTKGSRGL 219 (255)
T ss_dssp SCCEEEEC-HHHHH----TCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-----------EEEEEECSTTGGGC
T ss_pred Cceeeecc-hhhcc----ccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-----------EEEEEEcCCccCCc
Confidence 00000 00000 0001123445666776788887788889999997643 22222211000000
Q ss_pred CCcccCCCceEEEEeeCCCCeEEeccCcceeEEEec
Q 037120 442 NRFVPLSEGVTACVTHPLNNTIVAGTKNSSLLVVSQ 477 (489)
Q Consensus 442 ~~~~~h~~~V~~va~~p~~~~i~sgs~dg~i~v~~~ 477 (489)
. .--..--.|+|.|+|+..++ ++-..+.+|..
T Consensus 220 ~---~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 220 S---HNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp S---SCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred c---cccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 0 00123478999999987666 55556666643
No 262
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.30 E-value=0.22 Score=51.75 Aligned_cols=145 Identities=10% Similarity=0.062 Sum_probs=87.7
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEE
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVN 237 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~ 237 (489)
+.+|+|.+....++++-... +.|+.+++....... .....+ .........|++.+.+.+++++-...+.|.
T Consensus 426 ~~gl~~d~~~~~lY~sD~~~-~~I~~~~l~g~~~~~-----~~~~vi---~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~ 496 (791)
T 3m0c_C 426 VVALDTEVASNRIYWSDLSQ-RMICSTQLDRAHGVS-----SYDTVI---SRDIQAPDGLAVDWIHSNIYWTDSVLGTVS 496 (791)
T ss_dssp EEEEEEETTTTEEEEEETTT-TEEEEEEC-------------CEEEE---CSSCSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred eEEEeecccCCeeEEeeccc-eeEEEEeccCCCCCc-----ceeEEE---ecCCCCcceeeeeecCCcEEEEecCCCeEE
Confidence 67899998766566666655 899999984321100 000010 112235678999988875777777889999
Q ss_pred EEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeC--CCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCc
Q 037120 238 IWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGK--HGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLE 315 (489)
Q Consensus 238 iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~--dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 315 (489)
+.++....... .....-.....|+++|.+.+|+.+.. .+.|...++........+...-.. .+.|++++.+.
T Consensus 497 v~~ldG~~~~~--l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~----P~GLavD~~~~ 570 (791)
T 3m0c_C 497 VADTKGVKRKT--LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW----PNGITLDLLSG 570 (791)
T ss_dssp EEETTSSSEEE--EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSC----EEEEEEETTTT
T ss_pred EEeCCCCeEEE--EEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCC----ceEEEEecCCC
Confidence 99997543211 22223345789999998777777653 378999988753322222222223 67777776554
Q ss_pred ce
Q 037120 316 KI 317 (489)
Q Consensus 316 ~i 317 (489)
.|
T Consensus 571 ~L 572 (791)
T 3m0c_C 571 RL 572 (791)
T ss_dssp EE
T ss_pred eE
Confidence 44
No 263
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.22 E-value=0.28 Score=51.40 Aligned_cols=184 Identities=11% Similarity=0.090 Sum_probs=103.1
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
..|.+|..+++|.+.+ |+.+| +..||..+....... .... ..... |.++...+++. +.+ ++.
T Consensus 88 n~I~~i~~d~~g~lWi-gT~~G-l~~yd~~~~~f~~~~---------~~~~--~~~~~---i~~i~~d~~g~-lwi-~t~ 149 (795)
T 4a2l_A 88 DISRIVKTDSQGRVWI-GTRDG-LSRYDEEKDIFQNFF---------YEKN--GKHLQ---VNGIEEISPEQ-LLI-STP 149 (795)
T ss_dssp SCEEEEEECTTSCEEE-EESSC-EEEEETTTTEEEEEC---------CEET--TEECC---CCEEEEEETTE-EEE-EET
T ss_pred cceeEEEECCCCCEEE-EeCCc-hheeCCCCCeEEecc---------cccc--CCCce---EEEEEECCCCC-EEE-EEC
Confidence 4599999999997665 55555 788998764332210 0000 00001 67787777763 444 442
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCc-ccC-eeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceee-cc
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDV-QKG-LSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLEL-ST 253 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h-~~~-v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~ 253 (489)
+-|..||.... .+.... .++ ... |.++...+++. +..++.++.|..||..+++. ... ..
T Consensus 150 --~gl~~~~~~~~------~~~~~~------~~~~~~~~i~~i~~d~~g~--lwigt~~~Gl~~~~~~~~~~--~~~~~~ 211 (795)
T 4a2l_A 150 --EGLIMFDIKES------KFIDDS------FSTAMHKTIASTLYRQGDQ--IYIGTSTDGLYTYSITQKTF--EKVIPI 211 (795)
T ss_dssp --TEEEEEETTTT------EEECSS------SCHHHHTCCEEEEEEETTE--EEEEESSSCEEEEETTTCCE--EECC--
T ss_pred --CceEEEECCCC------EEEecc------CCCCCCcceEEEEECCCCC--EEEEECCCCEEEEeCCCCeE--EEecCC
Confidence 46888987321 111110 011 123 88888877775 44466655689999877552 211 11
Q ss_pred CCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecC---CccCCCCeeEEEeCCCCcce
Q 037120 254 GSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNH---KEVCHLPLTSLKLASMLEKI 317 (489)
Q Consensus 254 ~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~---~~~~~~~v~~l~~~~~~~~i 317 (489)
.....|.++...+++.+.+ ++.++-|.+||..+++........ .......|.++...++|...
T Consensus 212 ~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW 277 (795)
T 4a2l_A 212 LGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLW 277 (795)
T ss_dssp --CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEE
T ss_pred CCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEE
Confidence 2346788999888877554 444444888998775432111110 00001338999988888655
No 264
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.20 E-value=0.15 Score=49.12 Aligned_cols=137 Identities=11% Similarity=0.125 Sum_probs=74.7
Q ss_pred eeEEEeeC-CCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeC-CC-
Q 037120 158 LDAVRWNL-ANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDT-HG- 234 (489)
Q Consensus 158 V~~v~~~~-~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~-dg- 234 (489)
...|+|+| +.. .|..+... +.|+.+|+... .+ .. + .........|+|.++++ .|+.+.. ++
T Consensus 139 P~~lavdp~~~g-~Lyv~d~~-~~I~~id~~~~-----~v-~~---~----~~~~~~P~~ia~d~~G~-~lyvad~~~~~ 202 (430)
T 3tc9_A 139 AVWLSFDPKNHN-HLYLVGEQ-HPTRLIDFEKE-----YV-ST---V----YSGLSKVRTICWTHEAD-SMIITNDQNNN 202 (430)
T ss_dssp CCEEEEETTEEE-EEEEEEBT-EEEEEEETTTT-----EE-EE---E----ECCCSCEEEEEECTTSS-EEEEEECCSCT
T ss_pred CCEEEECCCCCC-eEEEEeCC-CcEEEEECCCC-----EE-EE---E----ecCCCCcceEEEeCCCC-EEEEEeCCCCc
Confidence 45699998 343 45555544 78888988321 11 11 1 11223678899999998 5555543 22
Q ss_pred ---cEEEEECCCCCcCceeeccCCCCceeEEEEee-cCCEEEEEeCCCeEEEEEcCCCcccceeec-CCccCCCCeeEEE
Q 037120 235 ---VVNIWDRRVGVLPSLELSTGSHGTLNSIQLHA-ENQIIFAAGKHGSIYLWDLRGGRTSAPFHN-HKEVCHLPLTSLK 309 (489)
Q Consensus 235 ---~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~-~~~~~~~~v~~l~ 309 (489)
.+.+.+. .+.......+. .......++++| ++.++++-..++.|..+|..++........ .... -..++
T Consensus 203 ~~~~v~~~~~-~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~----P~gia 276 (430)
T 3tc9_A 203 DRPNNYILTR-ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGW----EFHIQ 276 (430)
T ss_dssp TSEEEEEEEG-GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSC----CEEEE
T ss_pred ccceEEEEeC-CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCc----ceeEE
Confidence 2333443 33211111111 123456788999 565554545588999999986543111111 1112 46777
Q ss_pred eCCCCcc
Q 037120 310 LASMLEK 316 (489)
Q Consensus 310 ~~~~~~~ 316 (489)
|+|+|..
T Consensus 277 ~~pdG~~ 283 (430)
T 3tc9_A 277 FHPSGNY 283 (430)
T ss_dssp ECTTSSE
T ss_pred EcCCCCE
Confidence 7777763
No 265
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.15 E-value=0.18 Score=47.91 Aligned_cols=143 Identities=10% Similarity=0.052 Sum_probs=87.2
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCC--CCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCc
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYIS--DEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGV 235 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~ 235 (489)
+..++|++....++.+-... +.|..+++.... .....++ .........+++.+.+.+++++-...+.
T Consensus 114 ~~~l~~d~~~~~lywsD~~~-~~I~~~~~~g~~~~~~~~~~~----------~~~~~~p~glavD~~~~~lY~~d~~~~~ 182 (400)
T 3p5b_L 114 VVALDTEVASNRIYWSDLSQ-RMICSTQLDRAHGVSSYDTVI----------SRDIQAPDGLAVDWIHSNIYWTDSVLGT 182 (400)
T ss_dssp EEEEEEETTTTEEEEEETTT-TEEEEEEC------CCCEEEE----------CSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred ceEEeeeeccCceEEEecCC-CeEEEEEcccCCCCCcceEEE----------eCCCCCcccEEEEecCCceEEEECCCCe
Confidence 77899998776566666555 899999984321 0110111 1122357789998866646666667889
Q ss_pred EEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeC--CCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCC
Q 037120 236 VNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGK--HGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASM 313 (489)
Q Consensus 236 i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~--dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 313 (489)
|.+.|+..... .......-.....|+++|.+.+|+.+.. .+.|...++........+...-.. .+.|+++++
T Consensus 183 I~~~~~~g~~~--~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~----P~glavd~~ 256 (400)
T 3p5b_L 183 VSVADTKGVKR--KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW----PNGITLDLL 256 (400)
T ss_dssp EEEECTTTCSE--EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSC----EEEEEEETT
T ss_pred EEEEeCCCCce--EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCc----eEEEEEEeC
Confidence 99999875432 1122222345789999998777777653 478888888753322222221223 677888876
Q ss_pred Ccce
Q 037120 314 LEKI 317 (489)
Q Consensus 314 ~~~i 317 (489)
+..+
T Consensus 257 ~~~l 260 (400)
T 3p5b_L 257 SGRL 260 (400)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 6544
No 266
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.13 E-value=0.037 Score=50.56 Aligned_cols=168 Identities=10% Similarity=0.003 Sum_probs=86.7
Q ss_pred ceeEEEECCCCcEEEEEecC-C-eEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEe
Q 037120 98 GISALDFDCKGIYLVSATRS-G-CLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAS 175 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~d-g-~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~ 175 (489)
....++++++|+++++.... + .|..+|..+....... .. +...+ ...++..+.+ .++++..
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~------~~-~~~~~---------~~g~~~~~~~-~~~v~d~ 135 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLL------TL-PDAIF---------LNGITPLSDT-QYLTADS 135 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEE------EC-TTCSC---------EEEEEESSSS-EEEEEET
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEE------eC-CCccc---------cCcccccCCC-cEEEEEC
Confidence 47899999999977665443 2 4666666553321100 00 00001 2234444443 3455444
Q ss_pred cCCCEEEEEEeccCCCCCceeeeeceeee-eecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCC-CCcCceeecc
Q 037120 176 TRSNVVSIYDIGYISDEPVEVLKTRRSVT-VVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRV-GVLPSLELST 253 (489)
Q Consensus 176 ~d~g~i~vwd~~~~~~~~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~~ 253 (489)
.+ +.|.++|...... .+........ ....+.-...+.| ++++..++++-...+.|..+|+.. ++....+.+.
T Consensus 136 ~~-g~i~~~d~~~~~~---~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~ 209 (306)
T 2p4o_A 136 YR-GAIWLIDVVQPSG---SIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV 209 (306)
T ss_dssp TT-TEEEEEETTTTEE---EEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE
T ss_pred CC-CeEEEEeCCCCcE---eEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe
Confidence 45 8888888732100 1110000000 0001111234555 788874556666788999999875 3211111111
Q ss_pred CCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcc
Q 037120 254 GSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRT 290 (489)
Q Consensus 254 ~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~ 290 (489)
. ......++++++|++.++....+.|.++|.. ++.
T Consensus 210 ~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 210 E-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RST 244 (306)
T ss_dssp E-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCE
T ss_pred c-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCE
Confidence 1 1345678999999865555557889999875 443
No 267
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.10 E-value=0.16 Score=46.48 Aligned_cols=143 Identities=10% Similarity=0.073 Sum_probs=85.5
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCC-CCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcE
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISD-EPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVV 236 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i 236 (489)
..+++|++.+..++++-..+ +.|..+++..... .....+ . ...-.....+++.+.+.+++++-...+.|
T Consensus 32 p~g~~~d~~~~~ly~~D~~~-~~I~~~~~~g~~~~~~~~~~-----~----~~~~~~p~glavd~~~~~ly~~d~~~~~I 101 (316)
T 1ijq_A 32 VVALDTEVASNRIYWSDLSQ-RMICSTQLDRAHGVSSYDTV-----I----SRDIQAPDGLAVDWIHSNIYWTDSVLGTV 101 (316)
T ss_dssp EEEEEEETTTTEEEEEETTT-TEEEEEEC--------CEEE-----E----CSSCSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred eEEEEEEeCCCEEEEEECCC-CcEEEEECCCCCCCcccEEE-----E----eCCCCCcCEEEEeecCCeEEEEECCCCEE
Confidence 67799998776677776655 8999999843100 000111 0 11112457889987666466666678899
Q ss_pred EEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeC-C-CeEEEEEcCCCcccceee-cCCccCCCCeeEEEeCCC
Q 037120 237 NIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGK-H-GSIYLWDLRGGRTSAPFH-NHKEVCHLPLTSLKLASM 313 (489)
Q Consensus 237 ~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~-d-g~i~lwd~~~~~~~~~~~-~~~~~~~~~v~~l~~~~~ 313 (489)
.+.|+..... .......-.....++++|.+..++.+.. . +.|..+++.. .....+. ..-.. ...|+++++
T Consensus 102 ~~~~~~g~~~--~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~----P~gla~d~~ 174 (316)
T 1ijq_A 102 SVADTKGVKR--KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQW----PNGITLDLL 174 (316)
T ss_dssp EEEETTSSSE--EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSC----EEEEEEETT
T ss_pred EEEeCCCCce--EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCC----ceEEEEecc
Confidence 9999875331 1122222346789999997777776654 3 7888888764 3322222 11122 567888876
Q ss_pred Ccce
Q 037120 314 LEKI 317 (489)
Q Consensus 314 ~~~i 317 (489)
+..+
T Consensus 175 ~~~l 178 (316)
T 1ijq_A 175 SGRL 178 (316)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 6544
No 268
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.08 E-value=0.14 Score=46.72 Aligned_cols=167 Identities=7% Similarity=0.061 Sum_probs=97.6
Q ss_pred eeEEEEecCCCcEEEEEe-CCCcEEEEECCCCCcCceeeccC----CC--CceeEEEE---eecCCEEEEEe--------
Q 037120 214 LSDLAFSAVNTSRLIASD-THGVVNIWDRRVGVLPSLELSTG----SH--GTLNSIQL---HAENQIIFAAG-------- 275 (489)
Q Consensus 214 v~~~~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~----h~--~~v~~~~~---~p~~~~l~~~~-------- 275 (489)
-.+++|++... .|+.++ ..++|..||...+....+ .+.. .. ..+..|.| .|+++++++..
T Consensus 15 PE~~~wd~~~g-~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 15 PEDTIYDRTRQ-VFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CSCEEEETTTT-EEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred CcCccCcCCCC-EEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 34689998777 666666 899999999875542222 1211 11 13579999 68887777543
Q ss_pred -----CCCeEEEEEcC---CCcccceee--cCC-c------cCCCCeeEEEeCCCCcceeeccccceeeccceeEEEeCC
Q 037120 276 -----KHGSIYLWDLR---GGRTSAPFH--NHK-E------VCHLPLTSLKLASMLEKIGTLKAQSKIVSQEIHSIDLDP 338 (489)
Q Consensus 276 -----~dg~i~lwd~~---~~~~~~~~~--~~~-~------~~~~~v~~l~~~~~~~~i~~~~~~~~~~~~~i~~~~~~p 338 (489)
.+..|..||+. +++.+.... ... + ........++..++|....+-.... .. -+.++|
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~----~~--I~rV~p 166 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM----PA--IARVSA 166 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS----CE--EEEECT
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC----Ce--EEEEeC
Confidence 26789999999 777643332 100 0 0001267888888886554311110 11 235667
Q ss_pred CCCeEEEEEecCCceEEEEeeccceeeecCCCCCCcCCCCccccccCCCcceeecCCcEEEEeecCCCcEEEEeccCC
Q 037120 339 SCSYQLAFHLDDGWSGVLDVYNSRVSHVHCPPPAWLSDSNNSADQLHLRKPSWLSTNSIYAVGSSSDHGIHLLDFFPG 416 (489)
Q Consensus 339 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~d~~i~vwd~~~~ 416 (489)
++..+..+..+.. +.. .......+.+.|++..+++..+ ++.|..+|+...
T Consensus 167 dG~~~~~~~~~~~---------------------~~~------~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~p 216 (334)
T 2p9w_A 167 DGKTVSTFAWESG---------------------NGG------QRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKP 216 (334)
T ss_dssp TSCCEEEEEECCC---------------------CSS------SCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSS
T ss_pred CCCEEeeeeecCC---------------------Ccc------cccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCC
Confidence 7764432221110 000 0122345788888888888877 999999998743
No 269
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.04 E-value=0.036 Score=51.03 Aligned_cols=155 Identities=12% Similarity=0.024 Sum_probs=90.2
Q ss_pred ceeEEEECC-CCcEEEEEec-----------------CCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCcee
Q 037120 98 GISALDFDC-KGIYLVSATR-----------------SGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLD 159 (489)
Q Consensus 98 ~V~~~~fs~-~g~~la~g~~-----------------dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~ 159 (489)
....+++++ +|++.++-.. +|.|..||..+..... ..... .. ..
T Consensus 127 ~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~---------~~~~~------~~---p~ 188 (322)
T 2fp8_A 127 WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL---------LLKEL------HV---PG 188 (322)
T ss_dssp CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE---------EEEEE------SC---CC
T ss_pred ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE---------eccCC------cc---Cc
Confidence 367899999 9987776432 3678888876532211 00101 11 34
Q ss_pred EEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeC-------
Q 037120 160 AVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDT------- 232 (489)
Q Consensus 160 ~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~------- 232 (489)
.++|+|++..++++-..+ +.|.+|++....... ...+. .+.+ ...+++.++|. +.++...
T Consensus 189 gia~~~dg~~lyv~d~~~-~~I~~~~~~~~~~~~------~~~~~-~~~g----P~gi~~d~~G~-l~va~~~~~~~~~~ 255 (322)
T 2fp8_A 189 GAEVSADSSFVLVAEFLS-HQIVKYWLEGPKKGT------AEVLV-KIPN----PGNIKRNADGH-FWVSSSEELDGNMH 255 (322)
T ss_dssp EEEECTTSSEEEEEEGGG-TEEEEEESSSTTTTC------EEEEE-ECSS----EEEEEECTTSC-EEEEEEEETTSSTT
T ss_pred ceEECCCCCEEEEEeCCC-CeEEEEECCCCcCCc------cceEE-eCCC----CCCeEECCCCC-EEEEecCccccccc
Confidence 599999987566665655 899999985321111 11111 1122 67789999998 6666544
Q ss_pred ---CCcEEEEECCCCCcCceeeccCC----CCceeEEEEeecCCEEEEEeCCCeEEEEEcCC
Q 037120 233 ---HGVVNIWDRRVGVLPSLELSTGS----HGTLNSIQLHAENQIIFAAGKHGSIYLWDLRG 287 (489)
Q Consensus 233 ---dg~i~iwd~~~~~~~~~~~~~~h----~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~ 287 (489)
.+.|..+|.. ++ .+..+... -..++++++ .++.+.++....+.|..+++..
T Consensus 256 ~~~~~~v~~~d~~-G~--~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 256 GRVDPKGIKFDEF-GN--ILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp SCEEEEEEEECTT-SC--EEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CCCccEEEEECCC-CC--EEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 4678888864 34 23333221 234666766 4555444444588999999864
No 270
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.04 E-value=0.19 Score=46.05 Aligned_cols=163 Identities=13% Similarity=0.004 Sum_probs=95.5
Q ss_pred CceeEEEECCCC-cEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEe
Q 037120 97 PGISALDFDCKG-IYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAS 175 (489)
Q Consensus 97 ~~V~~~~fs~~g-~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~ 175 (489)
....+++|++++ .++.+-...+.|..++........ .... ........ ...+++.+.+..++++-.
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~--------~~~~--~~~~~~~~---p~glavd~~~~~ly~~d~ 96 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS--------SYDT--VISRDIQA---PDGLAVDWIHSNIYWTDS 96 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC----------------CEE--EECSSCSC---CCEEEEETTTTEEEEEET
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCc--------ccEE--EEeCCCCC---cCEEEEeecCCeEEEEEC
Confidence 457899999865 455555567899999887511000 0000 00001112 455888876655766666
Q ss_pred cCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCC-CcEEEEECCCCCcCceeeccC
Q 037120 176 TRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTH-GVVNIWDRRVGVLPSLELSTG 254 (489)
Q Consensus 176 ~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~d-g~i~iwd~~~~~~~~~~~~~~ 254 (489)
.+ +.|.+.|+... . ...+. ...-.....+++.|.+..++++.... +.|...++....... ....
T Consensus 97 ~~-~~I~~~~~~g~--~-~~~~~---------~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~--~~~~ 161 (316)
T 1ijq_A 97 VL-GTVSVADTKGV--K-RKTLF---------RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS--LVTE 161 (316)
T ss_dssp TT-TEEEEEETTSS--S-EEEEE---------ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE--EECS
T ss_pred CC-CEEEEEeCCCC--c-eEEEE---------ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE--EEEC
Confidence 55 89999998321 1 11111 11123568899999777355554443 788888876432111 1112
Q ss_pred CCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCC
Q 037120 255 SHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRG 287 (489)
Q Consensus 255 h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~ 287 (489)
.-...+.++++|++..|+.+.. .+.|..+|+..
T Consensus 162 ~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 162 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 2345679999998888877755 78999999874
No 271
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.03 E-value=0.28 Score=47.76 Aligned_cols=117 Identities=14% Similarity=0.233 Sum_probs=66.3
Q ss_pred eeEEEeeCC-CCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEE-------ecCCCcEEEE
Q 037120 158 LDAVRWNLA-NQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAF-------SAVNTSRLIA 229 (489)
Q Consensus 158 V~~v~~~~~-~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-------~~~~~~~l~s 229 (489)
...|+|.|. ...++++.... +.|++.|+... .+..... ...........|+| .+++. .|+.
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~-~~i~~ID~~~~-----~v~~l~~----~~~~~~~~p~~ia~~~~~~~~d~~G~-~lyv 209 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGH-KAIQLIDLKNR-----MLSSPLN----INTIPTNRIRSIAFNKKIEGYADEAE-YMIV 209 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETE-EEEEEEETTTT-----EEEEEEC----CTTSSCSBEEEEEECCCBTTTBCTTC-EEEE
T ss_pred CCEEEEccCCCCEEEEEECCC-CeEEEEECCCC-----EEEEEEc----cCccccCCCcEEEEeecccccCCCCC-EEEE
Confidence 456999984 44466655543 67888887321 1111111 01112346889999 99998 5555
Q ss_pred EeCCC-------cEEEEECCC-CCcCc---eeeccCCCCceeEEEEeecCCEEEEEe-CCCeEEEEEcC
Q 037120 230 SDTHG-------VVNIWDRRV-GVLPS---LELSTGSHGTLNSIQLHAENQIIFAAG-KHGSIYLWDLR 286 (489)
Q Consensus 230 ~s~dg-------~i~iwd~~~-~~~~~---~~~~~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~lwd~~ 286 (489)
+...+ .|.+.+... +.... ...... -.....++++|++..|+.+. .++.|..+|+.
T Consensus 210 ad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 210 AIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred EeCCCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 55433 266776443 12110 011111 12345788999666666655 48899999997
No 272
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.02 E-value=0.22 Score=46.65 Aligned_cols=70 Identities=7% Similarity=0.110 Sum_probs=46.3
Q ss_pred CCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeec
Q 037120 222 VNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHN 296 (489)
Q Consensus 222 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~ 296 (489)
++. .++.++.++.|..+|..+++.. .+ ............. .+..+++++.++.|..+|.++|+.+..+..
T Consensus 102 ~~~-~v~v~~~~g~l~a~d~~tG~~~-W~-~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 102 SGG-HVYIGSEKAQVYALNTSDGTVA-WQ-TKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp ETT-EEEEEETTSEEEEEETTTCCEE-EE-EECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eCC-EEEEEcCCCEEEEEECCCCCEE-EE-EeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeC
Confidence 344 6788888999999999988732 21 1111111111222 245788888899999999999987655543
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.96 E-value=0.3 Score=47.02 Aligned_cols=155 Identities=16% Similarity=0.161 Sum_probs=89.1
Q ss_pred ceeEEEECCC---CcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEE
Q 037120 98 GISALDFDCK---GIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACA 174 (489)
Q Consensus 98 ~V~~~~fs~~---g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~ 174 (489)
....++|+|+ |.++++ ...+.|+.+|..+...... ... ... ...++|++++. ++++.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~-D~~~~I~~id~~~g~v~~~---------~~~------~~~---P~giavd~dG~-lyVad 199 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWV-GQRDAFRHVDFVNQYVDIK---------TTN------IGQ---CADVNFTLNGD-MVVVD 199 (433)
T ss_dssp CCCEEEECTTTTTCEEEEE-CBTSCEEEEETTTTEEEEE---------CCC------CSC---EEEEEECTTCC-EEEEE
T ss_pred CCceEEEccccCCCEEEEE-eCCCCEEEEECCCCEEEEe---------ecC------CCC---ccEEEECCCCC-EEEEc
Confidence 4678999985 555444 3338899999866433221 111 111 67799999987 66665
Q ss_pred ecC--CCE-EEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEec-CCCcEEEEEeCCCcEEEEECCCCCcCcee
Q 037120 175 STR--SNV-VSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSA-VNTSRLIASDTHGVVNIWDRRVGVLPSLE 250 (489)
Q Consensus 175 ~~d--~g~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 250 (489)
... ... +...+.... ......+. .-.....+++.| ++. ++++-..++.|+.+|..++... ..
T Consensus 200 ~~~~~~~~gv~~~~~~~~-~~~~~~~~-----------~~~~P~giavd~~~G~-lyv~d~~~~~V~~~d~~~g~~~-~~ 265 (433)
T 4hw6_A 200 DQSSDTNTGIYLFTRASG-FTERLSLC-----------NARGAKTCAVHPQNGK-IYYTRYHHAMISSYDPATGTLT-EE 265 (433)
T ss_dssp CCSCTTSEEEEEECGGGT-TCCEEEEE-----------ECSSBCCCEECTTTCC-EEECBTTCSEEEEECTTTCCEE-EE
T ss_pred CCCCcccceEEEEECCCC-eecccccc-----------ccCCCCEEEEeCCCCe-EEEEECCCCEEEEEECCCCeEE-EE
Confidence 411 012 333332111 01000111 112456688999 555 6666667789999998866520 11
Q ss_pred ecc-CCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcC
Q 037120 251 LST-GSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLR 286 (489)
Q Consensus 251 ~~~-~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~ 286 (489)
... +....-..++|+|+++.|+.+.. .+.|+.+|..
T Consensus 266 ~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 266 EVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 111 11222346999999997666655 7899998876
No 274
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.89 E-value=0.082 Score=49.82 Aligned_cols=122 Identities=7% Similarity=0.148 Sum_probs=79.0
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCce-----eeeeceeeeee-c-CCcccCeeEEEEecCCCc--EEE
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVE-----VLKTRRSVTVV-G-SDVQKGLSDLAFSAVNTS--RLI 228 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~-----~~~~~~~~~~~-~-~~h~~~v~~~~~~~~~~~--~l~ 228 (489)
|..+..||+|. +|+..+ +..|.|-.+......... .++. +.+... . .....+|..+.|||-+.+ .|+
T Consensus 68 i~qlvlSpsG~-lLAl~g--~~~V~Vv~LP~~~~~~~~~~~~~~~q~-~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LV 143 (452)
T 3pbp_A 68 TFHVISSTSGD-LLCLFN--DNEIFVMEVPWGYSNVEDVSIQDAFQI-FHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIV 143 (452)
T ss_dssp TCEEEECTTSS-EEEEEC--SSEEEEEECCTTCSCCCCHHHHHTTEE-EEEEGGGCC--CCCCEEEEEECTTBGGGCEEE
T ss_pred eeEEEECCCCC-EEEEec--CCeEEEEEecCccccCcccccccccce-eEEEcCCcccCCCCceeEEEeccccCCCCeEE
Confidence 67799999986 666666 479999999633211110 1111 111110 0 113568999999997753 899
Q ss_pred EEeCCCcEEEEECCCCC-cCc-eee------ccCCCCceeEEEEeecCCEEEEEe--CCCeEEEE
Q 037120 229 ASDTHGVVNIWDRRVGV-LPS-LEL------STGSHGTLNSIQLHAENQIIFAAG--KHGSIYLW 283 (489)
Q Consensus 229 s~s~dg~i~iwd~~~~~-~~~-~~~------~~~h~~~v~~~~~~p~~~~l~~~~--~dg~i~lw 283 (489)
+-..|+.|++||+.... .|. ++. .......|.+++|.+++-.|++.+ ..|.|+-.
T Consensus 144 VLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 144 VLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 99999999999998632 222 110 112236788999999888888866 67888754
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.89 E-value=0.34 Score=46.58 Aligned_cols=140 Identities=11% Similarity=0.062 Sum_probs=74.6
Q ss_pred eeEEEeeCC-CCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCC---
Q 037120 158 LDAVRWNLA-NQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTH--- 233 (489)
Q Consensus 158 V~~v~~~~~-~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~d--- 233 (489)
-..|+|+|+ ....|..+... +.|+.+|...+ .+.. + .........++|.+++. ++++....
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g-----~v~~----~----~~~~~~P~giavd~dG~-lyVad~~~~~~ 205 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQ-----YVDI----K----TTNIGQCADVNFTLNGD-MVVVDDQSSDT 205 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-SCEEEEETTTT-----EEEE----E----CCCCSCEEEEEECTTCC-EEEEECCSCTT
T ss_pred CceEEEccccCCCEEEEEeCC-CCEEEEECCCC-----EEEE----e----ecCCCCccEEEECCCCC-EEEEcCCCCcc
Confidence 456999985 22345555544 78888987322 1111 1 11223678999999998 66665422
Q ss_pred C-cEEEEECCCCCcCceeeccCCCCceeEEEEee-cCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeC
Q 037120 234 G-VVNIWDRRVGVLPSLELSTGSHGTLNSIQLHA-ENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLA 311 (489)
Q Consensus 234 g-~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~ 311 (489)
. .+...+...+... .... ..-.....++++| ++.+.++-..++.|+.+|..++.....+...... ..-..++|+
T Consensus 206 ~~gv~~~~~~~~~~~-~~~~-~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~--~~~~~ia~d 281 (433)
T 4hw6_A 206 NTGIYLFTRASGFTE-RLSL-CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTK--GSNFHIVWH 281 (433)
T ss_dssp SEEEEEECGGGTTCC-EEEE-EECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCC--SSCEEEEEC
T ss_pred cceEEEEECCCCeec-cccc-cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCC--CCcccEEEe
Confidence 1 2333333221110 0111 1123456788999 5555444445889999999876542222211111 112357788
Q ss_pred CCCcc
Q 037120 312 SMLEK 316 (489)
Q Consensus 312 ~~~~~ 316 (489)
|++..
T Consensus 282 pdG~~ 286 (433)
T 4hw6_A 282 PTGDW 286 (433)
T ss_dssp TTSSE
T ss_pred CCCCE
Confidence 87763
No 276
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.86 E-value=0.27 Score=45.04 Aligned_cols=159 Identities=13% Similarity=0.009 Sum_probs=96.6
Q ss_pred ceeEEEECCC-CcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 98 GISALDFDCK-GIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 98 ~V~~~~fs~~-g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
...+++|++. +.++.+-...+.|..++........ ......... ...+++.+.+..++++-..
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~-------------~~~~~~l~~---p~glavd~~~g~ly~~d~~ 99 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ-------------NVVVSGLLS---PDGLACDWLGEKLYWTDSE 99 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC-------------EEEEECCSC---CCEEEEETTTTEEEEEETT
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE-------------EEEcCCCCC---ccEEEEEcCCCeEEEEECC
Confidence 3668899985 5555665667889999887631100 000001112 4458888766667777665
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe-CCCcEEEEECCCCCcCceeeccCC
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD-THGVVNIWDRRVGVLPSLELSTGS 255 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~h 255 (489)
. +.|.++++... . ...+. .........+++.|.+..++++-. ..+.|...++....... .....
T Consensus 100 ~-~~I~~~~~dG~--~-~~~l~---------~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~--~~~~~ 164 (318)
T 3sov_A 100 T-NRIEVSNLDGS--L-RKVLF---------WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI--IINSE 164 (318)
T ss_dssp T-TEEEEEETTSC--S-CEEEE---------CSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE--EECSS
T ss_pred C-CEEEEEECCCC--c-EEEEE---------eCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE--EEECC
Confidence 5 89999998421 1 11111 112235688999987663444442 35788888876432111 11112
Q ss_pred CCceeEEEEeecCCEEEEEeC-CCeEEEEEcCC
Q 037120 256 HGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRG 287 (489)
Q Consensus 256 ~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~ 287 (489)
-..-+.++++|++..|+.+.. .+.|..+|+..
T Consensus 165 l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 165 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 234579999998887777755 78999999874
No 277
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.85 E-value=0.085 Score=48.11 Aligned_cols=172 Identities=10% Similarity=0.048 Sum_probs=97.0
Q ss_pred eEEEECCCCcEEEEEe-cCCeEEEEeCCCcccccCCCCCCCCCcccccccccC-CCCCCceeEEEe---eCCCCCEEEEE
Q 037120 100 SALDFDCKGIYLVSAT-RSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLH-IPLPQQLDAVRW---NLANQDEVACA 174 (489)
Q Consensus 100 ~~~~fs~~g~~la~g~-~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h-~~~~~~V~~v~~---~~~~~~~l~s~ 174 (489)
-+++|++....|..++ ..|+|..||.......... .. . ..| -.....+..|.| .|++. ++++.
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~-------~~-~---~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~ 83 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVV-------ID-G---ASSNGDGEQQMSGLSLLTHDNSKR-LFAVM 83 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEEC-------CT-T---TCCSSCCSEEEEEEEESSSSSCCE-EEEEE
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEe-------cC-C---ccccCCCcceeeEEEEeccCCCCc-EEEEE
Confidence 4678987555555555 6999999998753221110 00 0 000 001112567999 57753 55543
Q ss_pred ec-------------CCCEEEEEEec---cCCCCCceeeeeceeee--eecCC-cccCeeEEEEecCCCcEEEEEeCC-C
Q 037120 175 ST-------------RSNVVSIYDIG---YISDEPVEVLKTRRSVT--VVGSD-VQKGLSDLAFSAVNTSRLIASDTH-G 234 (489)
Q Consensus 175 ~~-------------d~g~i~vwd~~---~~~~~~~~~~~~~~~~~--~~~~~-h~~~v~~~~~~~~~~~~l~s~s~d-g 234 (489)
.. + +.|..||+. ++ +............ ....+ -....++++..++|+ ..++++.. +
T Consensus 84 ~~~~af~~~g~~~~g~-~~v~~~Dl~~~~tg--~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~ 159 (334)
T 2p9w_A 84 KNAKSFNFADQSSHGA-SSFHSFNLPLSENS--KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMP 159 (334)
T ss_dssp EETTTTCTTSCCSSSC-CEEEEEESSCCTTC--CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSC
T ss_pred cccccccccccccCCC-CEEEEEcCCcCCCC--CEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCC
Confidence 31 4 789999995 22 1111111000000 00000 112488999999999 78888877 7
Q ss_pred cEEEEECCCCCcCceee-c--cCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCC
Q 037120 235 VVNIWDRRVGVLPSLEL-S--TGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRG 287 (489)
Q Consensus 235 ~i~iwd~~~~~~~~~~~-~--~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~ 287 (489)
.|...|........+.. . .......+.|+++|+|..|++....|.|..+|+++
T Consensus 160 ~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 160 AIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred eEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 77666655321111100 0 11223467999999999999997799999999984
No 278
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.82 E-value=0.3 Score=46.39 Aligned_cols=168 Identities=8% Similarity=-0.019 Sum_probs=97.7
Q ss_pred ceeEEEECC-CCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 98 GISALDFDC-KGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 98 ~V~~~~fs~-~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
....+++++ .+++..+-...+.|.+.+++...... .... .... ...+++.|.+..++.+-..
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~--------l~~~------~~~~---P~~iavdp~~g~ly~td~~ 222 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT--------LFRE------NGSK---PRAIVVDPVHGFMYWTDWG 222 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEE--------EEEC------SSCC---EEEEEEETTTTEEEEEECS
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEE--------EEeC------CCCC---cceEEEecccCeEEEEeCC
Confidence 467889987 45555666667889988887632111 0000 1111 5679999976656666543
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCC
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSH 256 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~ 256 (489)
+.+.|...++... .. ..+. ...-...+.|++.+++..++++-...+.|..+|+.......+......-
T Consensus 223 ~~~~I~~~~~dG~--~~-~~~~---------~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l 290 (400)
T 3p5b_L 223 TPAKIKKGGLNGV--DI-YSLV---------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRL 290 (400)
T ss_dssp SSCCEEEEETTSC--SC-EEEE---------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTT
T ss_pred CCCEEEEEeCCCC--cc-EEEE---------ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCC
Confidence 2267888877321 11 1111 1112356889999888734555456788999998754322221111112
Q ss_pred CceeEEEEeecCCEEEEE-eCCCeEEEEEcCCCcccceeec
Q 037120 257 GTLNSIQLHAENQIIFAA-GKHGSIYLWDLRGGRTSAPFHN 296 (489)
Q Consensus 257 ~~v~~~~~~p~~~~l~~~-~~dg~i~lwd~~~~~~~~~~~~ 296 (489)
.....+++ ++..++.+ ...+.|..+|..+|+.+..+..
T Consensus 291 ~~P~gl~v--~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~ 329 (400)
T 3p5b_L 291 AHPFSLAV--FEDKVFWTDIINEAIFSANRLTGSDVNLLAE 329 (400)
T ss_dssp SSEEEEEE--ETTEEEEEESSSCSEEEEESSSCCCCEEEEC
T ss_pred CCCEEEEE--eCCEEEEecCCCCeEEEEEcCCCCceEEEec
Confidence 33456666 34455554 4478899999888877666653
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.73 E-value=0.25 Score=51.45 Aligned_cols=167 Identities=13% Similarity=0.018 Sum_probs=99.2
Q ss_pred CCceeEEEECCC-CcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEE
Q 037120 96 KPGISALDFDCK-GIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACA 174 (489)
Q Consensus 96 ~~~V~~~~fs~~-g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~ 174 (489)
...+.+|+|++. +.++.+-...+.|+.+++....... ... ......... ...|++.+.+..++++-
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~--------~~~--~vi~~~l~~---P~GLAvD~~~~~LY~tD 489 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS--------SYD--TVISRDIQA---PDGLAVDWIHSNIYWTD 489 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC----------------CE--EEECSSCSC---CCEEEEETTTTEEEEEE
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCc--------cee--EEEecCCCC---cceeeeeecCCcEEEEe
Confidence 345788999985 4555555567888888887521100 000 000001122 45588888876677777
Q ss_pred ecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCC-CcEEEEECCCCCcCceeecc
Q 037120 175 STRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTH-GVVNIWDRRVGVLPSLELST 253 (489)
Q Consensus 175 ~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~d-g~i~iwd~~~~~~~~~~~~~ 253 (489)
... +.|.+.++... . ..++. .........|++.|.+..++++-... +.|...++..... .....
T Consensus 490 ~~~-~~I~v~~ldG~--~-~~~l~---------~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~--~~lv~ 554 (791)
T 3m0c_C 490 SVL-GTVSVADTKGV--K-RKTLF---------RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--YSLVT 554 (791)
T ss_dssp TTT-TEEEEEETTSS--S-EEEEE---------ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE--EEEEC
T ss_pred cCC-CeEEEEeCCCC--e-EEEEE---------eCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce--EEEEe
Confidence 766 89999998422 1 11111 11223578999999866355544333 7888888875432 11222
Q ss_pred CCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCCCcc
Q 037120 254 GSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRGGRT 290 (489)
Q Consensus 254 ~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~~~ 290 (489)
..-...+.|++++.+..|+.+-. .+.|..+|+.....
T Consensus 555 ~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~ 592 (791)
T 3m0c_C 555 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 592 (791)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce
Confidence 22356789999988888887755 77899999875443
No 280
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.61 E-value=0.057 Score=55.38 Aligned_cols=62 Identities=15% Similarity=0.253 Sum_probs=45.2
Q ss_pred CCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecC
Q 037120 233 HGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNH 297 (489)
Q Consensus 233 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~ 297 (489)
+|.|..||+.+++.. .+.. +........+...+.++++++.||.|++||.++++.+..++..
T Consensus 437 ~g~l~A~D~~tG~~~-W~~~--~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~ 498 (668)
T 1kv9_A 437 SGALLAWDPVKQKAA-WKVP--YPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQ 498 (668)
T ss_dssp EEEEEEEETTTTEEE-EEEE--ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cceEEEEeCCCCcEE-EEcc--CCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCC
Confidence 478999999998632 2221 1233444455667889999988999999999999988777654
No 281
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.59 E-value=0.02 Score=58.93 Aligned_cols=117 Identities=12% Similarity=0.066 Sum_probs=67.9
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCC--CCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCc
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYIS--DEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGV 235 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~ 235 (489)
+..|+|.+....++++-... +.|+.+++.... ......+ .........|++.+.+.+++++-...+.
T Consensus 408 p~gla~d~~~~~Ly~sD~~~-~~I~~~~~~g~~~~~~~~~~i----------~~~~~~P~glavD~~~g~LY~tD~~~~~ 476 (699)
T 1n7d_A 408 VVALDTEVASNRIYWSDLSQ-RMICSTQLDRAHGVSSYDTVI----------SRDIQAPDGLAVDWIHSNIYWTDSVLGT 476 (699)
T ss_dssp CCCCEEETTTTEEEECCTTT-TSBEEEESCCCCC-CCCCCBC----------CSCC--CCCEECCCSSSBCEECCTTTSC
T ss_pred eEEEccccccCeEEEEecCC-CeEEEEecCCCCCCcceEEEE----------eCCCCCcceEEEEeeCCcEEEEeccCCe
Confidence 45589998766555555544 889999984310 0100110 0011134567887655546666567789
Q ss_pred EEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeC--CCeEEEEEcCC
Q 037120 236 VNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGK--HGSIYLWDLRG 287 (489)
Q Consensus 236 i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~--dg~i~lwd~~~ 287 (489)
|.++|+.... ..............++++|.+.+|+.+.. .+.|..+++..
T Consensus 477 I~v~d~dg~~--~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG 528 (699)
T 1n7d_A 477 VSVADTKGVK--RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 528 (699)
T ss_dssp EEEEBSSSCC--EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS
T ss_pred EEEEecCCCc--eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC
Confidence 9999987543 12122222244578899997766666543 36788777754
No 282
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.58 E-value=0.53 Score=47.11 Aligned_cols=77 Identities=9% Similarity=0.090 Sum_probs=46.5
Q ss_pred EEEecCCCcEEEEEeCC----------------CcEEEEECCCCCcCceeecc-CCCC----cee---EEEEeecCC---
Q 037120 217 LAFSAVNTSRLIASDTH----------------GVVNIWDRRVGVLPSLELST-GSHG----TLN---SIQLHAENQ--- 269 (489)
Q Consensus 217 ~~~~~~~~~~l~s~s~d----------------g~i~iwd~~~~~~~~~~~~~-~h~~----~v~---~~~~~p~~~--- 269 (489)
+++.+... .++.+..+ +.|..+|.++++.. .+... .|.. .+. -+...++|+
T Consensus 240 ~a~d~~~g-~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~-W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~ 317 (571)
T 2ad6_A 240 YAYDPKLN-LFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAK-WGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTP 317 (571)
T ss_dssp CEEETTTT-EEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEE-EEEESSTTCSSCCCCCCCCEEEEEEETTEEEE
T ss_pred EEEcCCCC-eEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEE-EEecCCCCcccccccCCCCEEEecccCCcEEE
Confidence 55666666 55555422 35999999998743 22211 2211 111 122334674
Q ss_pred EEEEEeCCCeEEEEEcCCCcccceee
Q 037120 270 IIFAAGKHGSIYLWDLRGGRTSAPFH 295 (489)
Q Consensus 270 ~l~~~~~dg~i~lwd~~~~~~~~~~~ 295 (489)
.++.++.+|.++++|..+|+.+..++
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeec
Confidence 56777789999999999998865554
No 283
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.52 E-value=0.38 Score=44.68 Aligned_cols=167 Identities=11% Similarity=0.126 Sum_probs=91.2
Q ss_pred ceeEEEECCCCcEEEEE------------ecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeC
Q 037120 98 GISALDFDCKGIYLVSA------------TRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNL 165 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g------------~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~ 165 (489)
+.-.++..|+|..++++ ..+|.|.++|..+........ ..... .+...... ...+.+.+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l-----~~~g~-~~~~~~f~---PhGi~~~~ 121 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSEL-----EIIGN-TLDISSFN---PHGISTFI 121 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEEC-----EEECS-SCCGGGCC---EEEEEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEE-----EccCC-CCCcCcee---eeeeEEEE
Confidence 45566778888665554 268999999987421111000 00000 00001112 34466655
Q ss_pred --CCC-CEEEEEec-CCCEEEEEEeccCCCCCceeeeeceeeeeecCC-cccCeeEEEEecCCCcEEEEEe---C-----
Q 037120 166 --ANQ-DEVACAST-RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSD-VQKGLSDLAFSAVNTSRLIASD---T----- 232 (489)
Q Consensus 166 --~~~-~~l~s~~~-d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~s---~----- 232 (489)
++. .++++-.. .+.+|.+|++..... .+.....+ .+ .-...+++.+.++|. ++++.. .
T Consensus 122 d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~----~~~~~~~~----~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~ 192 (355)
T 3sre_A 122 DDDNTVYLLVVNHPGSSSTVEVFKFQEEEK----SLLHLKTI----RHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLK 192 (355)
T ss_dssp CTTCCEEEEEEECSTTCCEEEEEEEETTTT----EEEEEEEE----CCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHH
T ss_pred CCCCcEEEEEEECCCCCCeEEEEEEECCCC----EEEEEecc----ccCCCCCCceEEEeCCCC-EEecCCcEeCCcccc
Confidence 343 24444332 137899999854321 11111111 21 234689999999997 666554 1
Q ss_pred ---------CCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCC
Q 037120 233 ---------HGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRG 287 (489)
Q Consensus 233 ---------dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~ 287 (489)
.|.|.-+|.. + +. .....-..-+.++|+|+++.++.+.. .+.|..||+..
T Consensus 193 ~~e~~~~~~~g~vyr~d~~--~--~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 193 SWEMHLGLAWSFVTYYSPN--D--VR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp HHHHHTTCCCEEEEEECTT--C--CE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cchhhccCCccEEEEEECC--e--EE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 2455556542 2 11 12112245689999999999888865 88999999874
No 284
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.33 E-value=0.58 Score=42.96 Aligned_cols=155 Identities=14% Similarity=0.133 Sum_probs=85.2
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
..+..+++.+++.+++.+...+..+-+|-... ...... .... ..+..+.+.+++. +++.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~------------tW~~~~--~~~~---~~~~~~~~~~~g~-~~~~~~- 223 (327)
T 2xbg_A 163 GVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQT------------AWEPHN--RTTS---RRLHNMGFTPDGR-LWMIVN- 223 (327)
T ss_dssp CCEEEEEECTTSCEEEEETTSSEEEEECTTCS------------SCEEEE--CCSS---SCEEEEEECTTSC-EEEEET-
T ss_pred cceEEEEEcCCCcEEEEECCCcEEEEeCCCCC------------ceeECC--CCCC---CccceeEECCCCC-EEEEeC-
Confidence 45889999999988887765544444443110 011100 0111 1277889988874 554444
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeecc---
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELST--- 253 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--- 253 (489)
+ |.+.+.+...+ ........ .-..+...+.++.+.+++. +++. +.++.| ++....++ ......
T Consensus 224 ~-G~~~~s~~D~G-----~tW~~~~~---~~~~~~~~~~~v~~~~~~~-~~~~-g~~g~i-~~S~DgG~--tW~~~~~~~ 289 (327)
T 2xbg_A 224 G-GKIAFSDPDNS-----ENWGELLS---PLRRNSVGFLDLAYRTPNE-VWLA-GGAGAL-LCSQDGGQ--TWQQDVDVK 289 (327)
T ss_dssp T-TEEEEEETTEE-----EEECCCBC---TTSSCCSCEEEEEESSSSC-EEEE-ESTTCE-EEESSTTS--SCEECGGGT
T ss_pred C-ceEEEecCCCC-----CeeEeccC---CcccCCcceEEEEecCCCE-EEEE-eCCCeE-EEeCCCCc--ccEEcCccC
Confidence 4 88877642101 11111110 0001223588899988766 5554 447777 34444443 232222
Q ss_pred CCCCceeEEEEeecCCEEEEEeCCCeEEEEEc
Q 037120 254 GSHGTLNSIQLHAENQIIFAAGKHGSIYLWDL 285 (489)
Q Consensus 254 ~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~ 285 (489)
.....+.++.|.+++ .+++++.+|.|.-++-
T Consensus 290 ~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 290 KVPSNFYKILFFSPD-QGFILGQKGILLRYVT 320 (327)
T ss_dssp TSSSCCCEEEEEETT-EEEEECSTTEEEEECC
T ss_pred CCCCCeEEEEEECCC-ceEEEcCCceEEEEcC
Confidence 234568889997554 5778888998877764
No 285
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.30 E-value=0.17 Score=49.15 Aligned_cols=164 Identities=10% Similarity=0.061 Sum_probs=93.3
Q ss_pred ceeEEEECCC--CcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEe-------eCCCC
Q 037120 98 GISALDFDCK--GIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRW-------NLANQ 168 (489)
Q Consensus 98 ~V~~~~fs~~--g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~-------~~~~~ 168 (489)
....|+|+|. ++++++-...+.|++.|.......... ... ..... ....++| ++++.
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~---------~~~--~~~~~---~p~~ia~~~~~~~~d~~G~ 205 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPL---------NIN--TIPTN---RIRSIAFNKKIEGYADEAE 205 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEE---------CCT--TSSCS---BEEEEEECCCBTTTBCTTC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEE---------ccC--ccccC---CCcEEEEeecccccCCCCC
Confidence 4678999983 555555555577888998874333210 000 00111 2677999 99987
Q ss_pred CEEEEEecCC-----CEEEEEEecc-CCCC--C-ceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEE
Q 037120 169 DEVACASTRS-----NVVSIYDIGY-ISDE--P-VEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIW 239 (489)
Q Consensus 169 ~~l~s~~~d~-----g~i~vwd~~~-~~~~--~-~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iw 239 (489)
.++++...+. ..|.+++... +.-. + ...+. .+. ....++++|++..++++-..++.|..+
T Consensus 206 ~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-------~~~----~p~giavdp~~g~LYvtd~~~g~V~r~ 274 (496)
T 3kya_A 206 YMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA-------AYK----QCNGATIHPINGELYFNSYEKGQVFRL 274 (496)
T ss_dssp EEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE-------EES----CCCCEEECTTTCCEEEEETTTTEEEEE
T ss_pred EEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec-------cCC----CceEEEEcCCCCeEEEEECCCCEEEEE
Confidence 5555544320 1355555322 0000 0 01111 112 345678899666467777788899999
Q ss_pred ECC-------CCCc--C---c----e-eec-cCCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcC
Q 037120 240 DRR-------VGVL--P---S----L-ELS-TGSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLR 286 (489)
Q Consensus 240 d~~-------~~~~--~---~----~-~~~-~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~ 286 (489)
|+. ++.. + . . +.. .+.......++|+|+|++|+.+.. ...|+.+|..
T Consensus 275 d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 275 DLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp CHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 997 5442 0 0 1 111 122344578999999997666644 7889987654
No 286
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.27 E-value=0.33 Score=48.67 Aligned_cols=62 Identities=19% Similarity=0.258 Sum_probs=43.0
Q ss_pred CCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecC
Q 037120 233 HGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNH 297 (489)
Q Consensus 233 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~ 297 (489)
+|.|..||+.+++.. .+... ..++..-.+...+.+++.++.||.++.||.++|+.+-.++..
T Consensus 465 ~G~l~A~D~~tG~~~-W~~~~--~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~ 526 (582)
T 1flg_A 465 VGSLRAMDPVSGKVV-WEHKE--HLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTG 526 (582)
T ss_dssp SEEEEEECTTTCCEE-EEEEE--SSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cceEEEEECCCCCEE-EEecC--CCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCC
Confidence 688999999998732 22211 122222223345778888988999999999999998777653
No 287
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.26 E-value=0.17 Score=50.73 Aligned_cols=61 Identities=15% Similarity=0.125 Sum_probs=42.6
Q ss_pred CCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeec
Q 037120 233 HGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHN 296 (489)
Q Consensus 233 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~ 296 (489)
+|.|..||+.+++.. .+.. +...+.+..+...+..+++++.||.|+.||.++|+.+..++.
T Consensus 443 ~g~l~a~D~~tG~~~-W~~~--~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAK-WTKW--EKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp CEEEEEECTTTCCEE-EEEE--ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCeEEEEECCCCCEE-EEec--CCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeC
Confidence 578999999988732 2221 122333333444577888888899999999999998777764
No 288
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.25 E-value=0.75 Score=42.75 Aligned_cols=107 Identities=8% Similarity=-0.023 Sum_probs=59.3
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecC---CCcEEEEEeCC-
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAV---NTSRLIASDTH- 233 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~~l~s~s~d- 233 (489)
-..++|.|++. ++++- .+ |.|.+++ . +. ...+.....+ ..-......|+|+|+ +..++++-...
T Consensus 33 P~~ia~~pdG~-l~V~e-~~-g~I~~i~-~-g~---~~~~~~~~v~----~~g~~~p~gia~~pdf~~~g~lYv~~~~~~ 100 (352)
T 2ism_A 33 PWALAFLPDGG-MLIAE-RP-GRIRLFR-E-GR---LSTYAELSVY----HRGESGLLGLALHPRFPQEPYVYAYRTVAE 100 (352)
T ss_dssp EEEEEECTTSC-EEEEE-TT-TEEEEEE-T-TE---EEEEEECCCC----CSTTCSEEEEEECTTTTTSCEEEEEEEECT
T ss_pred ceEEEEcCCCe-EEEEe-CC-CeEEEEE-C-CC---ccEeecceEe----ecCCCCceeEEECCCCCCCCEEEEEEecCC
Confidence 56699999985 55554 44 8999998 1 21 1111111111 222346889999998 45244444432
Q ss_pred ----CcEEEEECCCCCc----Cceeecc---CCCCceeEEEEeecCCEEEEEeC
Q 037120 234 ----GVVNIWDRRVGVL----PSLELST---GSHGTLNSIQLHAENQIIFAAGK 276 (489)
Q Consensus 234 ----g~i~iwd~~~~~~----~~~~~~~---~h~~~v~~~~~~p~~~~l~~~~~ 276 (489)
+.|..|+...+.. ..+..+. ........++|.|+|.+.++.+.
T Consensus 101 ~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~ 154 (352)
T 2ism_A 101 GGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGE 154 (352)
T ss_dssp TSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCC
T ss_pred CCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECC
Confidence 6788888764311 1121111 11122368999999976555443
No 289
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.24 E-value=0.69 Score=42.28 Aligned_cols=116 Identities=9% Similarity=-0.002 Sum_probs=74.9
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEE
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVN 237 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~ 237 (489)
..+++|.+....++.+-... +.|..+++...... ...+. ..-.....+++.+.+.+++++-...+.|.
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~-~~I~r~~~~g~~~~-~~~~~----------~~l~~p~glavd~~~g~ly~~d~~~~~I~ 104 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSE-EAIKRTEFNKTESV-QNVVV----------SGLLSPDGLACDWLGEKLYWTDSETNRIE 104 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTT-TEEEEEETTSSSCC-CEEEE----------ECCSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred cEEEEEEeCCCEEEEEECCC-CcEEEEEccCCCce-EEEEc----------CCCCCccEEEEEcCCCeEEEEECCCCEEE
Confidence 66799998766566666655 89999998433111 01111 01124667899876664666666788999
Q ss_pred EEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeC--CCeEEEEEcCC
Q 037120 238 IWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGK--HGSIYLWDLRG 287 (489)
Q Consensus 238 iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~--dg~i~lwd~~~ 287 (489)
++++....... ...........++++|.+..|+.+.. .+.|...++..
T Consensus 105 ~~~~dG~~~~~--l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 154 (318)
T 3sov_A 105 VSNLDGSLRKV--LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG 154 (318)
T ss_dssp EEETTSCSCEE--EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS
T ss_pred EEECCCCcEEE--EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC
Confidence 99987543111 22223355689999998777777653 57888888764
No 290
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.17 E-value=0.47 Score=47.69 Aligned_cols=76 Identities=9% Similarity=0.116 Sum_probs=47.7
Q ss_pred EEEecCCCcEEEEEeCC----------------CcEEEEECCCCCcCceeecc-CCC--------CceeEEEEe-ecC--
Q 037120 217 LAFSAVNTSRLIASDTH----------------GVVNIWDRRVGVLPSLELST-GSH--------GTLNSIQLH-AEN-- 268 (489)
Q Consensus 217 ~~~~~~~~~~l~s~s~d----------------g~i~iwd~~~~~~~~~~~~~-~h~--------~~v~~~~~~-p~~-- 268 (489)
+++.+... +++.+..+ +.|..+|.++++.. .+... .|. .++. +... .+|
T Consensus 246 ~a~d~~~g-~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~-W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~ 322 (599)
T 1w6s_A 246 YAYDPGTN-LIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAK-FGYQKTPHDEWDYAGVNVMML-SEQKDKDGKA 322 (599)
T ss_dssp CEEETTTT-EEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEE-EEEESSTTCSSCCCCCCCCEE-EEEECTTSCE
T ss_pred eeEeCCCC-EEEEeCCCCccccCcccCCCccccceEEEEeCCCCcee-eEeecCCCccccccCCCccEE-EeccccCCcE
Confidence 45566666 66666644 47999999998743 22222 221 1111 2222 467
Q ss_pred -CEEEEEeCCCeEEEEEcCCCcccceee
Q 037120 269 -QIIFAAGKHGSIYLWDLRGGRTSAPFH 295 (489)
Q Consensus 269 -~~l~~~~~dg~i~lwd~~~~~~~~~~~ 295 (489)
..++.++.+|.++++|.++|+.+....
T Consensus 323 ~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 323 RKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 456677889999999999998865554
No 291
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.10 E-value=0.16 Score=47.96 Aligned_cols=136 Identities=12% Similarity=0.074 Sum_probs=79.9
Q ss_pred ceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCccccccccc-CC--CCCCceeEEEeeCCCCC--EEE
Q 037120 98 GISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLL-HI--PLPQQLDAVRWNLANQD--EVA 172 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~-h~--~~~~~V~~v~~~~~~~~--~l~ 172 (489)
.|..+..||+|++||..+. ..|.|-.+........+..-. +.... ..+.. .. ....+|..+.|+|-+.. .|+
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~-~~~q~-~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LV 143 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQ-DAFQI-FHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIV 143 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHH-HTTEE-EEEEGGGCC--CCCCEEEEEECTTBGGGCEEE
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccc-cccce-eEEEcCCcccCCCCceeEEEeccccCCCCeEE
Confidence 4677899999999999875 479999887422111100000 00000 00111 00 01234999999997643 566
Q ss_pred EEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe--CCCcEEEEE
Q 037120 173 CASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD--THGVVNIWD 240 (489)
Q Consensus 173 s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s--~dg~i~iwd 240 (489)
+-..| ++|++||+.....+|. .+...... ..+......|.+++|.+++- .|...+ ..|.|+-.-
T Consensus 144 VLtsD-~~Ir~yDl~~s~~~P~-~L~k~~~~-fg~d~~~~ev~S~~Fg~~~l-TLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 144 VLKED-DTITMFDILNSQEKPI-VLNKPNNS-FGLDARVNDITDLEFSKDGL-TLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp EEETT-SCEEEEETTCTTSCCE-EESCCCSE-EESCSSCCCEEEEEECTTSS-CEEEEECTTSCEEEEES
T ss_pred EEecC-CEEEEEEcccCCCCCc-chhccccc-cCCCcccceEEEEEEcCCCc-EEEEEecCCCCCEEEEC
Confidence 66666 9999999976555554 44322111 12234447899999998665 555544 778887543
No 292
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.05 E-value=1.8 Score=45.19 Aligned_cols=194 Identities=7% Similarity=-0.020 Sum_probs=108.5
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
..|.++..+++|.+. .|+.++-|..++.......... ..+... ....-....|.++...+++. + -.|+.
T Consensus 313 ~~v~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~~~~~-------~~~~~~-~~~~l~~~~v~~i~~d~~g~-l-Wigt~ 381 (781)
T 3v9f_A 313 ASARYIFQDSFNNIW-IGTWGGGINFISNAPPTFHTWS-------YSPTQM-NESSLSNKVVSSVCDDGQGK-L-WIGTD 381 (781)
T ss_dssp SCEEEEEECSSCCEE-EEEBSSCEEEECSSCCSCEEEC-----------CC-CSSCCSSSCEEEEEECTTSC-E-EEEEB
T ss_pred CeEEEEEEeCCCCEE-EEecCCeEEEeCCCCCcceeec-------cCcccc-ccCCCCCcceEEEEEcCCCC-E-EEEeC
Confidence 459999999998754 5776777888887753322110 000000 00000112288888877764 4 44444
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeec--cC
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELS--TG 254 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~--~~ 254 (489)
+ +-|..||.... .+.... .........|.++...+++. |..|+.++-|..+|.++++ ..... ..
T Consensus 382 ~-~Gl~~~~~~~~------~~~~~~---~~~~~~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~--~~~~~~~~~ 447 (781)
T 3v9f_A 382 G-GGINVFENGKR------VAIYNK---ENRELLSNSVLCSLKDSEGN--LWFGTYLGNISYYNTRLKK--FQIIELEKN 447 (781)
T ss_dssp S-SCEEEEETTEE------EEECC--------CCCSBEEEEEECTTSC--EEEEETTEEEEEECSSSCE--EEECCSTTT
T ss_pred C-CcEEEEECCCC------eEEEcc---CCCCCCCcceEEEEECCCCC--EEEEeccCCEEEEcCCCCc--EEEeccCCC
Confidence 4 56888887321 111100 00012345788988877776 5557777789999987654 22111 11
Q ss_pred CCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCC-ccCCCCeeEEEeCCCCcce
Q 037120 255 SHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHK-EVCHLPLTSLKLASMLEKI 317 (489)
Q Consensus 255 h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~i 317 (489)
....|.++...+++.+.+ |+. +-|..||..+++......... ......|.++...++|...
T Consensus 448 ~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW 509 (781)
T 3v9f_A 448 ELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFW 509 (781)
T ss_dssp CCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEE
T ss_pred CCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEE
Confidence 346789999888887544 444 568899988765422111110 0001338899888888655
No 293
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.81 E-value=0.026 Score=58.15 Aligned_cols=166 Identities=8% Similarity=-0.026 Sum_probs=92.6
Q ss_pred eeEEEECCC-CcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecC
Q 037120 99 ISALDFDCK-GIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTR 177 (489)
Q Consensus 99 V~~~~fs~~-g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d 177 (489)
...|++++. +.++++-...+.|.++++........ .. ..... ...+++.|.+..++++-...
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l--------~~------~~~~~---P~giavDp~~g~ly~td~~~ 517 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL--------FR------EQGSK---PRAIVVDPVHGFMYWTDWGT 517 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEE--------CC------CSSCC---CCCEECCSSSSCCEECCCSS
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEE--------Ee------CCCCC---cceEEEccCCCcEEEcccCC
Confidence 567888854 45555555678899998876322110 00 00112 34488998766566655322
Q ss_pred CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCC
Q 037120 178 SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHG 257 (489)
Q Consensus 178 ~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~ 257 (489)
.+.|.++++... . ..++. ...-...+.|+|.|++..++++-+..+.|..+|+.......+........
T Consensus 518 ~~~I~~~~~dG~--~-~~~l~---------~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~ 585 (699)
T 1n7d_A 518 PAKIKKGGLNGV--D-IYSLV---------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLA 585 (699)
T ss_dssp SCCEEBCCSSSC--C-CCEES---------CSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCS
T ss_pred CCeEEEEeCCCC--C-eeEEE---------eCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCC
Confidence 257777776321 1 01111 01112456799999877466666677899999987533222211111112
Q ss_pred ceeEEEEeecCCEEEEEe-CCCeEEEEEcCCCcccceee
Q 037120 258 TLNSIQLHAENQIIFAAG-KHGSIYLWDLRGGRTSAPFH 295 (489)
Q Consensus 258 ~v~~~~~~p~~~~l~~~~-~dg~i~lwd~~~~~~~~~~~ 295 (489)
....|++.. ..|+.+. ..+.|..+|..+++.+..+.
T Consensus 586 ~P~glavd~--~~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 586 HPFSLAVFE--DKVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp SCCCCEEET--TEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred CceEeEEEC--CEEEEEeCCCCeEEEEEccCCCceEEee
Confidence 234555543 3555554 47899999988877655554
No 294
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.79 E-value=1.2 Score=41.31 Aligned_cols=111 Identities=11% Similarity=0.027 Sum_probs=57.1
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecC---CCcEEEEEeC--
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAV---NTSRLIASDT-- 232 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~~l~s~s~-- 232 (489)
-..++|.|++..++++- .. |.|++++...... ..+...... ..........|+|+|+ +..++++-+.
T Consensus 20 P~~i~~~pdG~~l~V~e-~~-G~i~~~~~~g~~~---~~~~~~~~v---~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~ 91 (353)
T 2g8s_A 20 PWALAFLPDNHGMLITL-RG-GELRHWQAGKGLS---APLSGVPDV---WAHGQGGLLDVVLAPDFAQSRRIWLSYSEVG 91 (353)
T ss_dssp EEEEEECSTTCCEEEEE-TT-TEEEEEETTTEEC---CCCBSCCCC---CCSTTCSEEEEEECTTHHHHCEEEEEEEEEC
T ss_pred cEEEEEcCCCCEEEEEe-CC-ceEEEEeCCCcee---eEecCCccc---ccCCCCCceeEEECCCCCCCCEEEEEEeCCC
Confidence 56799999985455544 45 8999998521100 111111000 0122346789999996 4424444332
Q ss_pred -----CCcEEEEECCCCCc-----C-ceeecc---CCCCceeEEEEeecCCEEEEEeC
Q 037120 233 -----HGVVNIWDRRVGVL-----P-SLELST---GSHGTLNSIQLHAENQIIFAAGK 276 (489)
Q Consensus 233 -----dg~i~iwd~~~~~~-----~-~~~~~~---~h~~~v~~~~~~p~~~~l~~~~~ 276 (489)
...|..|++..... . .+..+. .....-..++|.|+|.+.++.+.
T Consensus 92 ~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 92 DDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp SSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred CCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 23566666653310 0 111111 01112357999999966666544
No 295
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.52 E-value=2.8 Score=43.63 Aligned_cols=199 Identities=11% Similarity=0.009 Sum_probs=107.1
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
..|.++..+++|.+.+ |+.+ -+.+||..+........ .......... ..|.++...+++ .+..|..
T Consensus 211 ~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~~~~~~~~~-------~~~~~~~l~~---~~i~~i~~d~~g--~lWigt~ 276 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWI-GTSK-GLALFNANTETFTNFHN-------NPGNIHGALS---SYIFSIKQLKDN--KLWIATE 276 (781)
T ss_dssp SSEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEC------------------CC---CCEEEEEECTTS--EEEEEES
T ss_pred CceeEEEEcCCCCEEE-EeCC-cHheECCCCCcEEEEEc-------CCCccccccC---ceEEEEEECCCC--CEEEEeC
Confidence 4599999999987665 4445 58889987643332110 0000000011 128888887775 4555554
Q ss_pred CCCEEEEEEeccCCCCCceeeee--ce---eeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceee
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKT--RR---SVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLEL 251 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~--~~---~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 251 (489)
. +-|.++|.....-. .+.. .. .......-....|.++...++|. |..|+.++-|..++...........
T Consensus 277 ~-~Gl~~~~~~~~~~~---~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~--lWigt~~~Gl~~~~~~~~~~~~~~~ 350 (781)
T 3v9f_A 277 L-NGIMILDLQQNQFL---LPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN--IWIGTWGGGINFISNAPPTFHTWSY 350 (781)
T ss_dssp S-SCEEEEETTCC------------CEEECBCSSTTSBSSSCEEEEEECSSCC--EEEEEBSSCEEEECSSCCSCEEEC-
T ss_pred C-CCeEEECCCCCeee---eeeccccccccCCCCCCCCCCCeEEEEEEeCCCC--EEEEecCCeEEEeCCCCCcceeecc
Confidence 3 56788887432111 0000 00 00000012345789998887776 6677778889999987654211110
Q ss_pred -------ccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcce
Q 037120 252 -------STGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKI 317 (489)
Q Consensus 252 -------~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i 317 (489)
.......|.++...++|.+ ..|+.++-|..||..++... .+..........|.++...+++...
T Consensus 351 ~~~~~~~~~l~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g~lW 421 (781)
T 3v9f_A 351 SPTQMNESSLSNKVVSSVCDDGQGKL-WIGTDGGGINVFENGKRVAI-YNKENRELLSNSVLCSLKDSEGNLW 421 (781)
T ss_dssp ---CCCSSCCSSSCEEEEEECTTSCE-EEEEBSSCEEEEETTEEEEE-CC-----CCCSBEEEEEECTTSCEE
T ss_pred CccccccCCCCCcceEEEEEcCCCCE-EEEeCCCcEEEEECCCCeEE-EccCCCCCCCcceEEEEECCCCCEE
Confidence 0012356889998888775 55665666888998764321 1110000001238888888777654
No 296
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.50 E-value=0.77 Score=46.10 Aligned_cols=62 Identities=13% Similarity=0.113 Sum_probs=42.1
Q ss_pred CCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeec
Q 037120 232 THGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHN 296 (489)
Q Consensus 232 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~ 296 (489)
.+|.|..||+.+++.. .+... ..++..-.+...+.+++.++.||.|+.||.++|+.+-.++.
T Consensus 451 ~~G~l~A~D~~tG~~~-W~~~~--~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l 512 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYK-WEKME--RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKI 512 (599)
T ss_dssp CCEEEEEECTTTCCEE-EEEEE--SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CcCeEEEEECCCCCEE-eEecC--CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeC
Confidence 3478999999988632 22211 12222222334677888888899999999999998777764
No 297
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.30 E-value=2.8 Score=42.26 Aligned_cols=166 Identities=9% Similarity=-0.009 Sum_probs=95.5
Q ss_pred CceeEEEECCCC-cEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEe
Q 037120 97 PGISALDFDCKG-IYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAS 175 (489)
Q Consensus 97 ~~V~~~~fs~~g-~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~ 175 (489)
.....+++++.+ ++..+-...+.|.+.+++...... +. ...... -..|++.|.+..++++-.
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~---------l~-----~~~l~~---P~~Iavdp~~g~ly~tD~ 146 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV---------LF-----WQELDQ---PRAIALDPSSGFMYWTDW 146 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE---------EE-----CSSCSC---CCCEEEETTTTEEEEEEC
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEE---------EE-----eCCCCC---CceEEEecCCCeEEEecc
Confidence 357889999955 455555668899999988632211 00 011122 344999998665666654
Q ss_pred cCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCC
Q 037120 176 TRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGS 255 (489)
Q Consensus 176 ~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h 255 (489)
.+.+.|...++... .. ..+.. ..-...+.|++.+++..++++-...+.|...|+.......+ ..+.
T Consensus 147 g~~~~I~r~~~dG~--~~-~~l~~---------~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~--~~~~ 212 (619)
T 3s94_A 147 GEVPKIERAGMDGS--SR-FIIIN---------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV--VKGS 212 (619)
T ss_dssp SSSCEEEEEETTSC--SC-EEEEC---------SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC--------
T ss_pred CCCCEEEEEECCCC--ce-EEEEe---------CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEE--EeCC
Confidence 32257766666321 11 11111 11235688999998773555555778899999875432211 1111
Q ss_pred CCceeEEEEeecCCEEEEEeC-CCeEEEEEcCCCcccceee
Q 037120 256 HGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRGGRTSAPFH 295 (489)
Q Consensus 256 ~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~~~~~~~~ 295 (489)
......+++..+ .++.+.. .+.|...|..+++....+.
T Consensus 213 ~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~~~~~i~ 251 (619)
T 3s94_A 213 LPHPFALTLFED--ILYWTDWSTHSILACNKYTGEGLREIH 251 (619)
T ss_dssp ---CCCEEESSS--EEEEECTTTCSEEEEESSSCCCCEECC
T ss_pred CCCceEEEEeCC--EEEEecCCCCEEEEEECCCCcccEEEe
Confidence 122345666544 6666654 7889999998887655544
No 298
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.27 E-value=1.7 Score=39.51 Aligned_cols=123 Identities=12% Similarity=0.152 Sum_probs=77.3
Q ss_pred EECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEE
Q 037120 103 DFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVS 182 (489)
Q Consensus 103 ~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~ 182 (489)
-.+|..+.||.-. ..+++|||+++....... .+. . +|.--+|-.+. .|+-.. +..|.
T Consensus 73 IMnP~~~ViALra-g~~LQiFnletK~klks~------~~~---------e---~VvfWkWis~~--~L~lVT--~taVy 129 (365)
T 2xzh_A 73 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAH------TMT---------D---DVTFWKWISLN--TVALVT--DNAVY 129 (365)
T ss_dssp EECSSSSEEEEEE-TTEEEEEETTTTEEEEEE------ECS---------S---CEEEEEECSSS--EEEEEE--SSEEE
T ss_pred eeCCCccEEEEec-CCeEEEechHHhhhhcce------ecC---------C---ccEEEEecCCC--eEEEEc--CCcEE
Confidence 3688888888776 678999999985444321 010 1 17778887654 566666 47999
Q ss_pred EEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe-------CCCcEEEEECCCCCcCceeeccCC
Q 037120 183 IYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD-------THGVVNIWDRRVGVLPSLELSTGS 255 (489)
Q Consensus 183 vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s-------~dg~i~iwd~~~~~~~~~~~~~~h 255 (489)
-|++.. ...|.+.+.....+ . ...|..-..+++.+ .++-.+ -.|.+.+|..+.. .-+.+.+|
T Consensus 130 HWs~~~-~s~P~kvFdR~~~L----~--~~QIInY~~d~~~k-W~~l~GI~~~~~~v~G~mQLYS~er~---~sQ~ieGh 198 (365)
T 2xzh_A 130 HWSMEG-ESQPVKMFDRHSSL----A--GCQIINYRTDAKQK-WLLLTGISAQQNRVVGAMQLYSVDRK---VSQPIEGH 198 (365)
T ss_dssp EEESST-TCCCEEEEECCGGG----T--TCEEEEEEECTTSC-EEEEEEEEEETTEEEEEEEEEETTTT---EEEEECCS
T ss_pred EEcccC-CCCCceeeecchhc----c--cceEEEEEECCCCC-EEEEEeEeccCCccceeEEEEeeccc---ccceeeee
Confidence 999954 44555554433322 2 35666777788877 544433 2367888988764 34556677
Q ss_pred CCce
Q 037120 256 HGTL 259 (489)
Q Consensus 256 ~~~v 259 (489)
-+..
T Consensus 199 aa~F 202 (365)
T 2xzh_A 199 AASF 202 (365)
T ss_dssp EEEE
T ss_pred eeee
Confidence 5444
No 299
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.09 E-value=2.1 Score=39.68 Aligned_cols=107 Identities=7% Similarity=-0.050 Sum_probs=58.5
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecC---CCcEEEEEeC--
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAV---NTSRLIASDT-- 232 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~~l~s~s~-- 232 (489)
-..++|.|++. ++++ ..+ |.|+++|. .+ . ..+.....+ ..-......|+++|+ +..++++-+.
T Consensus 31 P~~ia~~pdG~-l~V~-e~~-g~I~~~d~-~G--~--~~~~~~~v~----~~g~~g~~gia~~pdf~~~g~lyv~~~~~~ 98 (354)
T 3a9g_A 31 PWSIAPLGGGR-YLVT-ERP-GRLVLISP-SG--K--KLVASFDVA----NVGEAGLLGLALHPEFPKKSWVYLYASYFA 98 (354)
T ss_dssp EEEEEEEETTE-EEEE-ETT-TEEEEECS-SC--E--EEEEECCCC----CSTTCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CeEEEEcCCCe-EEEE-eCC-CEEEEEeC-CC--c--eEeecccee----ecCCCceeeEEeCCCCCcCCEEEEEEeccC
Confidence 56799999975 5555 444 89998863 11 1 122111111 222346889999998 4424444432
Q ss_pred -C----CcEEEEECCCCC-----cC-ceeecc-CCCCceeEEEEeecCCEEEEEeC
Q 037120 233 -H----GVVNIWDRRVGV-----LP-SLELST-GSHGTLNSIQLHAENQIIFAAGK 276 (489)
Q Consensus 233 -d----g~i~iwd~~~~~-----~~-~~~~~~-~h~~~v~~~~~~p~~~~l~~~~~ 276 (489)
+ ..|..|+..... .. .+..+. ........++|.|+|.+.++.+.
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~ 154 (354)
T 3a9g_A 99 EGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGD 154 (354)
T ss_dssp GGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred CCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence 3 567778766431 11 111111 11123467999999986666543
No 300
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.01 E-value=2.4 Score=40.86 Aligned_cols=120 Identities=10% Similarity=-0.018 Sum_probs=60.7
Q ss_pred ceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCC---CCCEEEEE
Q 037120 98 GISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLA---NQDEVACA 174 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~---~~~~l~s~ 174 (489)
.-..|+|.|+|+++++-...+.|++++........ ...............++..|+|+|+ +..+.++-
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~---------~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKT---------VFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE---------EEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeE---------EecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 46799999999977765544578888764322111 0000000000011233778999996 54566665
Q ss_pred ec------C-----CCEEEEEEeccCCCCCceeeeeceeeeeec-CCcccCeeEEEEecCCCcEEEEEe
Q 037120 175 ST------R-----SNVVSIYDIGYISDEPVEVLKTRRSVTVVG-SDVQKGLSDLAFSAVNTSRLIASD 231 (489)
Q Consensus 175 ~~------d-----~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~s 231 (489)
+. + ...|.-|++..... .+...+.....+ .........|+|.|+|. ++++.+
T Consensus 99 s~~~~~~~~~~~~~~~~v~r~~~~~~~~----~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~G 162 (454)
T 1cru_A 99 TFKNPKSTDKELPNQTIIRRYTYNKSTD----TLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIG 162 (454)
T ss_dssp EEECTTC--CCSCEEEEEEEEEEETTTT----EEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEEC
T ss_pred eccccCCCccccccccEEEEEEECCCCC----CcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEEC
Confidence 43 1 03555555532110 111111111111 11122478999999998 666655
No 301
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.90 E-value=3.5 Score=41.23 Aligned_cols=62 Identities=16% Similarity=0.155 Sum_probs=39.8
Q ss_pred CcEEEEECCCCCcCceeec-cCCCC----ceeE-EEEe---ecCC---EEEEEeCCCeEEEEEcCCCcccceeec
Q 037120 234 GVVNIWDRRVGVLPSLELS-TGSHG----TLNS-IQLH---AENQ---IIFAAGKHGSIYLWDLRGGRTSAPFHN 296 (489)
Q Consensus 234 g~i~iwd~~~~~~~~~~~~-~~h~~----~v~~-~~~~---p~~~---~l~~~~~dg~i~lwd~~~~~~~~~~~~ 296 (489)
+.|..+|.++++.. .+.. ..|.. .+.. +.+. .+|+ .++.++.+|.++++|.++|+.+..+..
T Consensus 291 ~~v~AlD~~TG~~~-W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 291 SGQVGVDPSSGEVK-WFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp SEEEEECTTTCCEE-EEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred ceEEEEeCCCCCEE-EEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence 58999999998743 2221 12321 1111 2222 4674 677888899999999999998666553
No 302
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.87 E-value=2.3 Score=38.92 Aligned_cols=76 Identities=11% Similarity=0.137 Sum_probs=45.1
Q ss_pred cccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCc
Q 037120 210 VQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGR 289 (489)
Q Consensus 210 h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~ 289 (489)
+...+..+++.+++. +++.+...+..+-+|-.-.....+ .......+..+.+.+++..+ +++.+|.+++.+...++
T Consensus 161 ~~~~~~~~~~~~~~~-~~~~g~~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~ 236 (327)
T 2xbg_A 161 AIGVMRNLNRSPSGE-YVAVSSRGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSE 236 (327)
T ss_dssp CCCCEEEEEECTTSC-EEEEETTSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEE
T ss_pred CCcceEEEEEcCCCc-EEEEECCCcEEEEeCCCCCceeEC--CCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCC
Confidence 445788999999877 665554433334444311111122 12345678899999988754 55668888877533333
No 303
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.59 E-value=2.1 Score=39.47 Aligned_cols=116 Identities=13% Similarity=-0.042 Sum_probs=61.9
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCC---CCCEEEE
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLA---NQDEVAC 173 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~---~~~~l~s 173 (489)
..-..|+|.|+|.++++--..|.|++++........ ..... ........+...|+|+|+ +..+.++
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~---------v~~~~--~v~~~g~~GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTE---------LGEVP--GVSPSGEGGLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE---------EEECT--TCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEee---------ecccC--ceeecCCCCceeeEeccccccCCEEEEE
Confidence 346899999999987776658999999765422111 00000 000111223778999995 3335554
Q ss_pred Ee--cCCCEEEEEEeccCCC------CCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe
Q 037120 174 AS--TRSNVVSIYDIGYISD------EPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD 231 (489)
Q Consensus 174 ~~--~d~g~i~vwd~~~~~~------~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s 231 (489)
-+ .+ +.|.-|.+..... ....++.... ....| .-..|+|.|+|. ++++.+
T Consensus 101 yt~~~~-~~v~R~~~~~~~~~~~~~~~~~~i~~~~p----~~~~H--~g~~l~fgpDG~-Lyvt~G 158 (347)
T 3das_A 101 FTSASD-NRIVRMLYDEKKPSGEQLGAPDTVFRGIP----KGVIH--NGGRIAFGPDKM-LYAGTG 158 (347)
T ss_dssp EECSSS-EEEEEEEBCTTSCTTCCBCCCEEEEEEEC----CCSSC--CCCCEEECTTSC-EEEECB
T ss_pred EecCCC-CEEEEEEeCCCCcccccCCCcEEEEEcCC----CCCCc--cCccccCCCCCC-EEEEEC
Confidence 32 23 5666666643110 1111111111 01234 346799999998 666654
No 304
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.12 E-value=0.38 Score=49.14 Aligned_cols=118 Identities=8% Similarity=-0.009 Sum_probs=70.5
Q ss_pred EEEeeC-CCCCEEEEEecCC----------CEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEE
Q 037120 160 AVRWNL-ANQDEVACASTRS----------NVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLI 228 (489)
Q Consensus 160 ~v~~~~-~~~~~l~s~~~d~----------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 228 (489)
++++.+ ++ .+++.|+.+. ..+.+||.....-.....+. ..+.....++++..++. +++
T Consensus 190 ~~av~~~~g-~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~---------~~~~~~~~~~~~~~~g~-lyv 258 (656)
T 1k3i_A 190 AAAIEPTSG-RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTV---------TKHDMFCPGISMDGNGQ-IVV 258 (656)
T ss_dssp EEEEETTTT-EEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEE---------CSCCCSSCEEEECTTSC-EEE
T ss_pred eEEEEecCC-EEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccC---------CCCCCccccccCCCCCC-EEE
Confidence 466777 55 4666665431 16888988544322211111 12223344567778888 888
Q ss_pred EEe-CCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEe-CC-----CeEEEEEcCCCc
Q 037120 229 ASD-THGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAG-KH-----GSIYLWDLRGGR 289 (489)
Q Consensus 229 s~s-~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~-~d-----g~i~lwd~~~~~ 289 (489)
.|+ .+..+.+||..+.+...+..+... ..-.+++..++++.++.|| .+ ..+.+||..+.+
T Consensus 259 ~GG~~~~~v~~yd~~t~~W~~~~~~~~~-R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 259 TGGNDAKKTSLYDSSSDSWIPGPDMQVA-RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp ECSSSTTCEEEEEGGGTEEEECCCCSSC-CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred eCCCCCCceEEecCcCCceeECCCCCcc-ccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 888 556899999987653222111111 1123556667999999998 34 579999998754
No 305
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.00 E-value=3 Score=38.65 Aligned_cols=157 Identities=12% Similarity=-0.019 Sum_probs=78.0
Q ss_pred ceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCC---CCCEEEEE
Q 037120 98 GISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLA---NQDEVACA 174 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~---~~~~l~s~ 174 (489)
.-..|+|.|+|+.|.++...|.|++++........ ...... . ......+...++|+|+ +..+.++-
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~---------~~~~~~-v-~~~g~~g~~gia~~pdf~~~g~lYv~~ 87 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAP---------LSGVPD-V-WAHGQGGLLDVVLAPDFAQSRRIWLSY 87 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCC---------CBSCCC-C-CCSTTCSEEEEEECTTHHHHCEEEEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeE---------ecCCcc-c-ccCCCCCceeEEECCCCCCCCEEEEEE
Confidence 36789999999833445567999999854321100 000000 0 0011123677999996 44466654
Q ss_pred ecC------CCEEEEEEeccCCCCCceeeeeceeeeeec-----CCcccCeeEEEEecCCCcEEEEEeC-----------
Q 037120 175 STR------SNVVSIYDIGYISDEPVEVLKTRRSVTVVG-----SDVQKGLSDLAFSAVNTSRLIASDT----------- 232 (489)
Q Consensus 175 ~~d------~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~l~s~s~----------- 232 (489)
... ...|..|++..... .+...+.....+ ..|. -..|+|.|+|. ++++.+.
T Consensus 88 ~~~~~~g~~~~~v~r~~~~~~~~----~~~~~~~i~~~~p~~~~~~h~--~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~ 160 (353)
T 2g8s_A 88 SEVGDDGKAGTAVGYGRLSDDLS----KVTDFRTVFRQMPKLSTGNHF--GGRLVFDGKGY-LFIALGENNQRPTAQDLD 160 (353)
T ss_dssp EEECSSSCEEEEEEEEEECTTSS----BEEEEEEEEECSSCCBSSSCC--CCCEEECSSSE-EEEEECCTTCGGGGGCTT
T ss_pred eCCCCCCCceeEEEEEEECCCCC----CCCceEEEEEECCCCCCCccc--CccEEECCCCc-EEEEECCCCCCCccCCCC
Confidence 431 13566666632211 111111111111 1232 35799999997 6666543
Q ss_pred --CCcEEEEECCCCC------------cCceeeccCCCCceeEEEEeecCCEEEEE
Q 037120 233 --HGVVNIWDRRVGV------------LPSLELSTGSHGTLNSIQLHAENQIIFAA 274 (489)
Q Consensus 233 --dg~i~iwd~~~~~------------~~~~~~~~~h~~~v~~~~~~p~~~~l~~~ 274 (489)
.|.|.-+|....- ...+ ...+|. ....++|+|....|+++
T Consensus 161 ~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i-~a~G~r-np~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 161 KLQGKLVRLTDQGEIPDDNPFIKESGVRAEI-WSYGIR-NPQGMAMNPWSNALWLN 214 (353)
T ss_dssp SCTTEEEEEETTSCCCTTCTTTTSTTSCTTE-EEECCS-EEEEEEEETTTTEEEEE
T ss_pred CCCeEEEEECCCCCCCCCCCCcCCCCCCccE-EEEcCc-CccceEEECCCCCEEEE
Confidence 2456666665320 0111 112343 35678999943344444
No 306
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=93.96 E-value=1.9 Score=39.90 Aligned_cols=110 Identities=15% Similarity=-0.033 Sum_probs=59.0
Q ss_pred ceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCC---CCCEEEEE
Q 037120 98 GISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLA---NQDEVACA 174 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~---~~~~l~s~ 174 (489)
.-..++|.|+|+++++ ..+|.|.+++ .. .... ... .. . ..........|+|+|+ +..++++-
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~-~g-~~~~---------~~~-~~-v-~~~g~~~p~gia~~pdf~~~g~lYv~~ 96 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR-EG-RLST---------YAE-LS-V-YHRGESGLLGLALHPRFPQEPYVYAYR 96 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE-TT-EEEE---------EEE-CC-C-CCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE-CC-CccE---------eec-ce-E-eecCCCCceeEEECCCCCCCCEEEEEE
Confidence 4678999999986555 5679999998 32 1110 000 00 0 0011122677999998 54466655
Q ss_pred ecCC----CEEEEEEeccCCCCCceeeeeceeeeeec-----CCcccCeeEEEEecCCCcEEEEEe
Q 037120 175 STRS----NVVSIYDIGYISDEPVEVLKTRRSVTVVG-----SDVQKGLSDLAFSAVNTSRLIASD 231 (489)
Q Consensus 175 ~~d~----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~l~s~s 231 (489)
..+. +.|..|+.... . +...+.....+ ..|. ...++|.|+|. ++++.+
T Consensus 97 ~~~~~~~~~~v~r~~~~~~--~----~~~~~~l~~~~p~~~~~~h~--~~~l~~~pdG~-Lyv~~G 153 (352)
T 2ism_A 97 TVAEGGLRNQVVRLRHLGE--R----GVLDRVVLDGIPARPHGLHS--GGRIAFGPDGM-LYVTTG 153 (352)
T ss_dssp EECTTSSEEEEEEEEECSS--C----EEEEEEEEEEECCCTTCCCC--CCCEEECTTSC-EEEECC
T ss_pred ecCCCCCccEEEEEEeCCC--C----cCceEEEEEeCCCCCCCCcC--CceEEECCCCC-EEEEEC
Confidence 4210 46777777421 1 11111111111 1233 36899999997 666644
No 307
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.78 E-value=2.8 Score=35.67 Aligned_cols=158 Identities=11% Similarity=-0.043 Sum_probs=76.5
Q ss_pred ceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecC
Q 037120 98 GISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTR 177 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d 177 (489)
.+..++|+|+|.+.|+ .+|.+.-.+..+..... ........+...- ....++.|.|++. +.++ + |
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~---------W~~s~t~IG~~Gw-~~F~a~~fD~~G~-LYav-~-d 106 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDN---------WMGRAKKIGNGGW-NQFQFLFFDPNGY-LYAV-S-K 106 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCC---------HHHHCEEEECSCG-GGCSEEEECTTSC-EEEE-E-T
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCccc---------ccccccEeccccc-ccceEEEECCCCC-EEEe-C-C
Confidence 5779999999998777 67766555543311110 1111111111110 0136789999874 4444 4 4
Q ss_pred CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcC----ceeecc
Q 037120 178 SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLP----SLELST 253 (489)
Q Consensus 178 ~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~----~~~~~~ 253 (489)
|.|.-++-...... ..+...... . .+-=..+..|.|.|+|. + .+.. |+.++-+-.-+.... ....+.
T Consensus 107 -G~iyr~~pP~~~~~--~Wl~~a~~v-g--~~gw~~~~~lff~p~G~-L-yav~-dg~lyr~~~P~~~~~~wl~~~~~~g 177 (236)
T 1tl2_A 107 -DKLYKASPPQSDTD--NWIARATEV-G--SGGWSGFKFLFFHPNGY-L-YAVH-GQQFYKALPPVSNQDNWLARATKIG 177 (236)
T ss_dssp -TEEEEESCCCSTTC--CHHHHSEEE-E--CSSGGGEEEEEECTTSC-E-EEEE-TTEEEEECCCSSTTCCHHHHCEEEE
T ss_pred -CEEEEeCCCcCCCC--ceeccccEe-c--cCCCCceEEEEECCCce-E-EEEe-CCcEEecCCCCCCCcccccccceec
Confidence 88877765221111 111111110 0 11114678999999998 4 4444 777543322211100 000111
Q ss_pred -CCCCceeEEEEeecCCEEEEEeCCCeEE
Q 037120 254 -GSHGTLNSIQLHAENQIIFAAGKHGSIY 281 (489)
Q Consensus 254 -~h~~~v~~~~~~p~~~~l~~~~~dg~i~ 281 (489)
..-....-+.|.|++.+..+. +|.++
T Consensus 178 ~~g~~~yr~l~f~~~G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 178 QGGWDTFKFLFFSSVGTLFGVQ--GGKFY 204 (236)
T ss_dssp SSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred cCCcceEEEEEECCCCcEEEEe--CCeEE
Confidence 112233446678887765554 66443
No 308
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=93.76 E-value=4.7 Score=38.19 Aligned_cols=129 Identities=12% Similarity=0.154 Sum_probs=80.2
Q ss_pred EEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCCCEE
Q 037120 102 LDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRSNVV 181 (489)
Q Consensus 102 ~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i 181 (489)
.-.+|..+.||.-. ..++.|||+++....... .+. .. |.--.|-.+. .|+-.. +..|
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klks~------~~~---------e~---VvfWkWis~~--~l~lVT--~taV 127 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAH------TMT---------DD---VTFWKWISLN--TVALVT--DNAV 127 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEE------ECS---------SC---CCEEEEEETT--EEEEEC--SSEE
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhcce------ecC---------CC---ceEEEecCCC--eEEEEc--CCee
Confidence 34688888887775 779999999985444321 011 11 6668887653 566666 4799
Q ss_pred EEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe-------CCCcEEEEECCCCCcCceeeccC
Q 037120 182 SIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD-------THGVVNIWDRRVGVLPSLELSTG 254 (489)
Q Consensus 182 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s-------~dg~i~iwd~~~~~~~~~~~~~~ 254 (489)
.-|++.. ...|.+.+.....+ . ...|..-..+++.+ .++-.+ -.|.+.+|..+... -+.+.+
T Consensus 128 yHWsi~~-~s~P~kvFdR~~~L----~--~~QIInY~~d~~~k-W~~l~GI~~~~~~v~G~mQLYS~er~~---sQ~ieG 196 (494)
T 1bpo_A 128 YHWSMEG-ESQPVKMFDRHSSL----A--GCQIINYRTDAKQK-WLLLTGISAQQNRVVGAMQLYSVDRKV---SQPIEG 196 (494)
T ss_dssp EEEESSS-SCCCEEEEECCGGG----T--TCEEEEEEECTTSS-EEEEEEEEEETTEEEEEEEEEESTTCC---EEEECC
T ss_pred EEecccC-CCCchhheecchhc----c--cceEEEEEECCCCC-eEEEEeecccCCcccceEEEeeccccc---cchhee
Confidence 9999954 44555554433322 2 35677777788887 544333 24678899887643 456668
Q ss_pred CCCceeEEEE
Q 037120 255 SHGTLNSIQL 264 (489)
Q Consensus 255 h~~~v~~~~~ 264 (489)
|-+....+.+
T Consensus 197 haa~F~~~~~ 206 (494)
T 1bpo_A 197 HAASFAQFKM 206 (494)
T ss_dssp SEEEEEEEEC
T ss_pred eeeeeEEEec
Confidence 8655544433
No 309
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.41 E-value=7.2 Score=39.23 Aligned_cols=159 Identities=10% Similarity=0.011 Sum_probs=94.9
Q ss_pred ceeEEEECCCC-cEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 98 GISALDFDCKG-IYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 98 ~V~~~~fs~~g-~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
.+.+++|++.+ .++.+-...+.|..++.+...... .. ...... ...+++...+.+++.+-..
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~--------v~------~~~~~~---p~GlAvD~~~~~lY~tD~~ 412 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQF--------VV------TAQIAH---PDGIAVDWVARNLYWTDTG 412 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE--------EE------CSSCSC---CCEEEEETTTTEEEEEETT
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEE--------EE------ECCCCC---cCceEEecccCcEEEEeCC
Confidence 47789999854 444454557888888887521111 00 001112 4458888766667777666
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe-CCCcEEEEECCCCCcCceeeccCC
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD-THGVVNIWDRRVGVLPSLELSTGS 255 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~h 255 (489)
. +.|.+.++... ...++. ...-....+|++.|....++++-. ....|...++.-..... .....
T Consensus 413 ~-~~I~v~~~~G~---~~~~l~---------~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~--l~~~~ 477 (619)
T 3s94_A 413 T-DRIEVTRLNGT---MRKILI---------SEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVV--LVNTS 477 (619)
T ss_dssp T-TEEEEEETTSC---SCEEEE---------CTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE--EECSS
T ss_pred C-CcEEEEeCCCC---eEEEEE---------ECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEE--EEeCC
Confidence 6 89999988422 111211 112236789999997552555442 23667777765432111 12222
Q ss_pred CCceeEEEEeecCCEEEEEeC-CCeEEEEEcCCC
Q 037120 256 HGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRGG 288 (489)
Q Consensus 256 ~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~ 288 (489)
-...+.|++++++..|+.+-. .+.|..+|+...
T Consensus 478 l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~ 511 (619)
T 3s94_A 478 LGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGT 511 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEESSSC
T ss_pred CCCCeeeEEcccCCEEEEEECCCCEEEEEecCCC
Confidence 346778999998887777755 678999998643
No 310
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.34 E-value=4.3 Score=37.55 Aligned_cols=113 Identities=14% Similarity=-0.024 Sum_probs=59.5
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCC---CCCEEEE
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLA---NQDEVAC 173 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~---~~~~l~s 173 (489)
..-..++|.|+|+++++ ..+|.|++++... . .. ..... . ......+...|+|+|+ +..++++
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~G-~-~~---------~~~~~--v-~~~g~~g~~gia~~pdf~~~g~lyv~ 93 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLISPSG-K-KL---------VASFD--V-ANVGEAGLLGLALHPEFPKKSWVYLY 93 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEECSSC-E-EE---------EEECC--C-CCSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEeCCC-c-eE---------eeccc--e-eecCCCceeeEEeCCCCCcCCEEEEE
Confidence 34678999999985554 5569999997432 2 11 00000 0 0011122677999997 5456666
Q ss_pred Eec--CC----CEEEEEEeccCCCCCceeeeeceeee---eecCCcccCeeEEEEecCCCcEEEEEe
Q 037120 174 AST--RS----NVVSIYDIGYISDEPVEVLKTRRSVT---VVGSDVQKGLSDLAFSAVNTSRLIASD 231 (489)
Q Consensus 174 ~~~--d~----g~i~vwd~~~~~~~~~~~~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~~l~s~s 231 (489)
-+. .+ +.|..|+....... +...+... .....|. ...|+|.|+|. ++++.+
T Consensus 94 ~~~~~~~~~~~~~v~r~~~~~~~~~----~~~~~~l~~~~~~~~~h~--~~~l~~~pDG~-Lyvt~G 153 (354)
T 3a9g_A 94 ASYFAEGGHIRNRVIRGRLDGSTFK----LKEVKTLIDGIPGAYIHN--GGRIRFGPDGM-LYITTG 153 (354)
T ss_dssp EEEECGGGCEEEEEEEEEECSSSCC----EEEEEEEEEEEECCSSCC--CCCEEECTTSC-EEEECC
T ss_pred EeccCCCCCcceEEEEEEECCCCcC----cCccEEEEEcCCCCCCcC--CceEEECCCCc-EEEEEC
Confidence 552 11 46777776422111 11111110 1112233 46799999998 666644
No 311
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=93.16 E-value=5.1 Score=36.79 Aligned_cols=155 Identities=11% Similarity=0.167 Sum_probs=86.6
Q ss_pred CCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCC----CCC--EEEEEecC--C
Q 037120 107 KGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLA----NQD--EVACASTR--S 178 (489)
Q Consensus 107 ~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~----~~~--~l~s~~~d--~ 178 (489)
...+++.....+-+.|||+.. +.... +. ... +..|..-|. +.. ++++...+ +
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G-~~l~~--------~~--------~g~---~nnVD~r~~~~l~g~~~dla~as~R~~~~ 98 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDG-KMLHS--------YN--------TGK---LNNVDIRYDFPLNGKKVDIAAASNRSEGK 98 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTS-CEEEE--------EC--------CSC---EEEEEEEEEEEETTEEEEEEEEEECSTTC
T ss_pred CccEEEEEcCCCCEEEEcCCC-cEEEE--------cc--------CCC---cccEEEecccccCCceEeEEEEeCCCCCC
Confidence 445666666788999999954 22221 00 011 444554442 111 33444433 3
Q ss_pred CEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEE--ecC-CCcEEEEEeCCCcEEEEECCC---CCc--Ccee
Q 037120 179 NVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAF--SAV-NTSRLIASDTHGVVNIWDRRV---GVL--PSLE 250 (489)
Q Consensus 179 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~-~~~~l~s~s~dg~i~iwd~~~---~~~--~~~~ 250 (489)
++|.+|++..... .+............-...+..+++ +|. +..+++....+|.+..|++.. +.. ..++
T Consensus 99 n~l~vf~iDp~~~----~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR 174 (355)
T 3amr_A 99 NTIEIYAIDGKNG----TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVR 174 (355)
T ss_dssp CEEEEEEECTTTC----CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEE
T ss_pred CeEEEEEECCCCC----ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEE
Confidence 8999998832111 122211000000000135667777 664 433577777889999998843 211 1333
Q ss_pred eccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcC
Q 037120 251 LSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLR 286 (489)
Q Consensus 251 ~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~ 286 (489)
.+. ..+.+..+..++....|+.+-.+.-|..+|.+
T Consensus 175 ~f~-lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 175 AFK-MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EEE-CSSCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred Eec-CCCCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 332 34678899999999999999888767777755
No 312
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=93.06 E-value=8.2 Score=38.89 Aligned_cols=120 Identities=10% Similarity=-0.008 Sum_probs=72.5
Q ss_pred CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCC
Q 037120 178 SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHG 257 (489)
Q Consensus 178 ~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~ 257 (489)
...|+..|+.... . ....+ ...-..+..|+|.+.+..++++-..++.|..+++...... ........
T Consensus 14 ~~~I~~i~l~~~~--~-~~~~~--------~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~--~v~~~g~~ 80 (628)
T 4a0p_A 14 RADIRRISLETNN--N-NVAIP--------LTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALE--HVVEFGLD 80 (628)
T ss_dssp TTEEEEEESSCTT--C-EEECC--------CCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCS
T ss_pred CCcEEEEECCCCC--c-ceEEE--------cCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE--EEEeCCCC
Confidence 3799999994321 1 11111 1112357889999987745666667899999998754322 12221224
Q ss_pred ceeEEEEeecCCEEEEEeC-CCeEEEEEcCCCcccceee-cCCccCCCCeeEEEeCCCCc
Q 037120 258 TLNSIQLHAENQIIFAAGK-HGSIYLWDLRGGRTSAPFH-NHKEVCHLPLTSLKLASMLE 315 (489)
Q Consensus 258 ~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~~~~~~~~-~~~~~~~~~v~~l~~~~~~~ 315 (489)
....+++++.+..|+.+.. .+.|.+.++..... ..+. ..-.. ...|++.|...
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~~l~~~~l~~----P~~iavdp~~G 135 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-QVLVWKDLDS----PRALALDPAEG 135 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC-EEEECSSCCC----EEEEEEETTTT
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-EEEEeCCCCC----cccEEEccCCC
Confidence 5678999988777776655 78999999875432 2222 11222 56777777443
No 313
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.76 E-value=13 Score=40.45 Aligned_cols=35 Identities=9% Similarity=-0.023 Sum_probs=28.5
Q ss_pred CceeEEEECCC------CcEEEEEec-CCeEEEEeCCCcccc
Q 037120 97 PGISALDFDCK------GIYLVSATR-SGCLTVHDFESLYYQ 131 (489)
Q Consensus 97 ~~V~~~~fs~~------g~~la~g~~-dg~i~vwd~~~~~~~ 131 (489)
..|.|+++.|. ++++|.|.. |++|+|+++...+..
T Consensus 554 ~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~ 595 (1158)
T 3ei3_A 554 HEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELL 595 (1158)
T ss_dssp SCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEE
T ss_pred CceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeE
Confidence 45999999864 479999997 999999999874433
No 314
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=92.73 E-value=11 Score=41.42 Aligned_cols=151 Identities=14% Similarity=0.208 Sum_probs=85.9
Q ss_pred EECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecCCCEEE
Q 037120 103 DFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTRSNVVS 182 (489)
Q Consensus 103 ~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d~g~i~ 182 (489)
-.+|..+.||.-. ..++.|||+++....... .+.. +|.--.|-... .|+-.+ +..|.
T Consensus 72 IMnP~~~iiALra-g~~lQiFnl~~k~klks~------~~~e------------~VvfWkWis~~--~l~lVT--~~aVy 128 (1630)
T 1xi4_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAH------TMTD------------DVTFWKWISLN--TVALVT--DNAVY 128 (1630)
T ss_pred ccCCCcceEEEec-CCeEEEeehHHhhhhccc------ccCC------------CceEEEecCCC--eeEEEc--CCeEE
Confidence 3678887777765 779999999884444321 1111 16667886654 455555 46999
Q ss_pred EEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEe-------CCCcEEEEECCCCCcCceeeccCC
Q 037120 183 IYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASD-------THGVVNIWDRRVGVLPSLELSTGS 255 (489)
Q Consensus 183 vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s-------~dg~i~iwd~~~~~~~~~~~~~~h 255 (489)
.|++.. ...|.+++...... . ...|..-..+++.+ .++-.| -.|.+.+|..+... .+.+.+|
T Consensus 129 HW~~~~-~s~P~k~fdR~~~L----~--~~QIinY~~d~~~k-W~~l~gi~~~~~~v~G~mQLyS~er~~---sQ~iegh 197 (1630)
T 1xi4_A 129 HWSMEG-ESQPVKMFDRHSSL----A--GCQIINYRTDAKQK-WLLLTGISAQQNRVVGAMQLYSVDRKV---SQPIEGH 197 (1630)
T ss_pred EeccCC-CCccHHHHhcchhc----c--cCeeEEeeeCCCCC-eEEEEeeccCCCcccceeeeeeccccc---chhhhHh
Confidence 999943 34454444332222 2 34666667777777 544333 34788899887643 3345577
Q ss_pred CCceeEEEEe--ecCCEEEEEeC----CCeEEEEEcCC
Q 037120 256 HGTLNSIQLH--AENQIIFAAGK----HGSIYLWDLRG 287 (489)
Q Consensus 256 ~~~v~~~~~~--p~~~~l~~~~~----dg~i~lwd~~~ 287 (489)
-+....+.+. +....+++-.. .+.++|-++..
T Consensus 198 a~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~ 235 (1630)
T 1xi4_A 198 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGT 235 (1630)
T ss_pred HhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCC
Confidence 6555444432 22222333222 25666666643
No 315
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=92.52 E-value=6.3 Score=36.19 Aligned_cols=129 Identities=9% Similarity=0.106 Sum_probs=76.0
Q ss_pred eeEEEe--eCCCC-CEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCC
Q 037120 158 LDAVRW--NLANQ-DEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHG 234 (489)
Q Consensus 158 V~~v~~--~~~~~-~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg 234 (489)
+..++. +|... ..++....+ |.+..|++....... ..-+..+.+ . -...+..|...+... .|+.+-++.
T Consensus 130 pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~-~~~~lVR~f----~-lgsq~EgcvvDd~~g-~Lyv~eEd~ 201 (355)
T 3amr_A 130 VYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGY-ISGKKVRAF----K-MNSQTEGMAADDEYG-RLYIAEEDE 201 (355)
T ss_dssp CCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSC-EEEEEEEEE----E-CSSCEEEEEEETTTT-EEEEEETTT
T ss_pred eeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCc-ccceEEEEe----c-CCCCcceEEEcCCCC-eEEEecccc
Confidence 333777 67543 345555556 999999995322110 111112222 1 123788888888777 888899887
Q ss_pred cEEEEECCCCC--cC-ceeecc-CC-CCceeEEEE--eecCC-EEEEEeC-CCeEEEEEcC-CCccccee
Q 037120 235 VVNIWDRRVGV--LP-SLELST-GS-HGTLNSIQL--HAENQ-IIFAAGK-HGSIYLWDLR-GGRTSAPF 294 (489)
Q Consensus 235 ~i~iwd~~~~~--~~-~~~~~~-~h-~~~v~~~~~--~p~~~-~l~~~~~-dg~i~lwd~~-~~~~~~~~ 294 (489)
-|..+|.+... .. .+.... ++ ...+..|++ .++++ +|++++. +++..+||.. +.+.+..|
T Consensus 202 GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 202 AIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred eEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 77777755221 11 232221 22 246788888 45666 7888775 8899999996 44434444
No 316
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.43 E-value=6.7 Score=36.25 Aligned_cols=102 Identities=12% Similarity=0.148 Sum_probs=55.7
Q ss_pred CeeEEEEecCCCcEEEEEe------------CCCcEEEEECCCC--CcCceeeccC----CCCceeEEEEee--cCC-EE
Q 037120 213 GLSDLAFSAVNTSRLIASD------------THGVVNIWDRRVG--VLPSLELSTG----SHGTLNSIQLHA--ENQ-II 271 (489)
Q Consensus 213 ~v~~~~~~~~~~~~l~s~s------------~dg~i~iwd~~~~--~~~~~~~~~~----h~~~v~~~~~~p--~~~-~l 271 (489)
...+++..|+|. .+++++ .+|.|.++|..+. +...+..... .......+.+.+ ++. +|
T Consensus 51 G~EDi~~~~~G~-~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 51 GSEDLEILPNGL-AFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCCEEEECTTSE-EEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CcceeEEcCCCe-EEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 455677777765 444441 6899999999843 2112221111 123455677766 344 45
Q ss_pred EEEe-C--CCeEEEEEcCCCcc----cceeecCCccCCCCeeEEEeCCCCccee
Q 037120 272 FAAG-K--HGSIYLWDLRGGRT----SAPFHNHKEVCHLPLTSLKLASMLEKIG 318 (489)
Q Consensus 272 ~~~~-~--dg~i~lwd~~~~~~----~~~~~~~~~~~~~~v~~l~~~~~~~~i~ 318 (489)
+++. . +.+|.+|++..... +..+.+.. -...+.+.+.++|.+..
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~---~~~pND~~v~~~G~fyv 180 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKL---LPSVNDIVAVGPEHFYA 180 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTT---CSSEEEEEEEETTEEEE
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCC---CCCCceEEEeCCCCEEe
Confidence 5552 2 56788887765422 23333211 13367888888887544
No 317
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=92.03 E-value=6.9 Score=35.55 Aligned_cols=172 Identities=12% Similarity=0.095 Sum_probs=96.4
Q ss_pred CceeEEEECCCCcEEEEEec-------CCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEe--eCCC
Q 037120 97 PGISALDFDCKGIYLVSATR-------SGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRW--NLAN 167 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~-------dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~--~~~~ 167 (489)
..|..-.-+++.++++..+- .|.+.+|..+....+. +++|... ...+.. ++..
T Consensus 152 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~---------ieGhaa~---------F~~~~~~g~~~~ 213 (365)
T 2xzh_A 152 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP---------IEGHAAS---------FAQFKMEGNAEE 213 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEE---------ECCSEEE---------EEEECCTTCSSC
T ss_pred ceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccce---------eeeeeee---------eEEEecCCCCCC
Confidence 34777778888888776543 4788999998855444 2222221 111111 1111
Q ss_pred CCEEEEEec--CCCEEEEEEeccC-CCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCC
Q 037120 168 QDEVACAST--RSNVVSIYDIGYI-SDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVG 244 (489)
Q Consensus 168 ~~~l~s~~~--d~g~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~ 244 (489)
..+++-+.. ..++++|-++... ...+....+....+.. -..-.+---++..++... .++--+.-|.|++||++++
T Consensus 214 ~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fp-pea~~DFPVamqvs~kyg-viyviTK~G~ihlyDleTg 291 (365)
T 2xzh_A 214 STLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFP-PEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETG 291 (365)
T ss_dssp EEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCC-TTCTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTC
T ss_pred ceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCC-ccccCCceEEEEecccCC-EEEEEeCCcEEEEEEcccC
Confidence 223333331 1258999998543 1221111111111100 122344455778888777 8888899999999999998
Q ss_pred CcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcc
Q 037120 245 VLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRT 290 (489)
Q Consensus 245 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~ 290 (489)
. ++....--...|...+-+....-++.....|.|.--.+...+.
T Consensus 292 t--~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 292 T--CIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp C--EEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred c--EEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 8 5533333345666556555555566666777776666665443
No 318
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=91.62 E-value=12 Score=37.60 Aligned_cols=164 Identities=9% Similarity=-0.060 Sum_probs=98.4
Q ss_pred ceeEEEECCCCc-EEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 98 GISALDFDCKGI-YLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 98 ~V~~~~fs~~g~-~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
....+++++.+. +..+-...+.|.+.+++...... ... ..... -..+++.|....++.+-..
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~--------l~~------~~l~~---P~~iavdp~~G~lY~tD~g 143 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV--------LVW------KDLDS---PRALALDPAEGFMYWTEWG 143 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE--------EEC------SSCCC---EEEEEEETTTTEEEEEECS
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE--------EEe------CCCCC---cccEEEccCCCeEEEeCCC
Confidence 467888987654 44555567889999987622111 000 01112 5679999876556666533
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCC
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSH 256 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~ 256 (489)
+.+.|...++... .. ..+.. .-...+.|++.+++..++++-...+.|...|+...... .+...-
T Consensus 144 ~~~~I~r~~~dG~--~~-~~l~~----------~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~---v~~~~l 207 (628)
T 4a0p_A 144 GKPKIDRAAMDGS--ER-TTLVP----------NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNRE---VIADDL 207 (628)
T ss_dssp SSCEEEEEETTSC--SC-EEEEC----------SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE---EEEECC
T ss_pred CCCEEEEEeCCCC--ce-EEEEC----------CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceE---EeeccC
Confidence 2267887777322 11 11111 12367889999987745555557789999999764422 222222
Q ss_pred CceeEEEEeecCCEEEEEeC-CCeEEEEEcCCCcccceeec
Q 037120 257 GTLNSIQLHAENQIIFAAGK-HGSIYLWDLRGGRTSAPFHN 296 (489)
Q Consensus 257 ~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~~~~~~~~~ 296 (489)
.....+++.. ..++.+.. .+.|...|..+++....+..
T Consensus 208 ~~P~glav~~--~~ly~tD~~~~~I~~~dk~tg~~~~~l~~ 246 (628)
T 4a0p_A 208 PHPFGLTQYQ--DYIYWTDWSRRSIERANKTSGQNRTIIQG 246 (628)
T ss_dssp SCEEEEEEET--TEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CCceEEEEEC--CEEEEecCCCCEEEEEECCCCCceEEEec
Confidence 3345777754 45666654 88999999888876555543
No 319
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.75 E-value=5.1 Score=38.55 Aligned_cols=113 Identities=13% Similarity=0.137 Sum_probs=59.0
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecC---CCcEEEEEeC--
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAV---NTSRLIASDT-- 232 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~~l~s~s~-- 232 (489)
-..++|.|++. ++++-... +.|++++...+ .. ..+........ ..........|+|+|+ +..++++-+.
T Consensus 29 P~~~a~~pdG~-l~V~e~~g-g~I~~~~~~~g--~~-~~~~~~~~~~~-~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~ 102 (454)
T 1cru_A 29 PHALLWGPDNQ-IWLTERAT-GKILRVNPESG--SV-KTVFQVPEIVN-DADGQNGLLGFAFHPDFKNNPYIYISGTFKN 102 (454)
T ss_dssp EEEEEECTTSC-EEEEETTT-CEEEEECTTTC--CE-EEEEECTTCCC-CTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred ceEEEEcCCCc-EEEEEcCC-CEEEEEECCCC--cE-eEEecCCcccc-ccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence 56799999985 66665422 47888875321 11 11111110000 0012457789999995 4424444432
Q ss_pred ----------CCcEEEEECCCCC------cCceeecc-CCCCceeEEEEeecCCEEEEEeC
Q 037120 233 ----------HGVVNIWDRRVGV------LPSLELST-GSHGTLNSIQLHAENQIIFAAGK 276 (489)
Q Consensus 233 ----------dg~i~iwd~~~~~------~~~~~~~~-~h~~~v~~~~~~p~~~~l~~~~~ 276 (489)
...|.-|+..... ...+..+. ........|+|.|+|.+.++.+.
T Consensus 103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 2345556553321 01121111 11234689999999987777665
No 320
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=89.60 E-value=1.5 Score=42.90 Aligned_cols=85 Identities=11% Similarity=0.069 Sum_probs=56.3
Q ss_pred CceeEEEECCCCcEEEEEec-CCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEe
Q 037120 97 PGISALDFDCKGIYLVSATR-SGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAS 175 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~-dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~ 175 (489)
...-.+.++|||+++++++. +.++.|+|+++....-.. +.+.+.....+...-+.+-...+|.+++ +...+-.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~-----k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlf 396 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAG-----KLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLF 396 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTT-----CCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEET
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhc-----cccCcccceEeeccCCCcccEEEECCCC-ceEeeee
Confidence 34456789999999988776 899999999874332211 0112222222333344557779999987 4666666
Q ss_pred cCCCEEEEEEecc
Q 037120 176 TRSNVVSIYDIGY 188 (489)
Q Consensus 176 ~d~g~i~vwd~~~ 188 (489)
-| .+|..|++..
T Consensus 397 id-SqvvkWni~~ 408 (638)
T 3sbq_A 397 ID-SQVVKWNMEE 408 (638)
T ss_dssp TT-TEEEEEEHHH
T ss_pred ec-ceEEEEeccH
Confidence 77 8999999953
No 321
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=89.22 E-value=2.3 Score=36.19 Aligned_cols=67 Identities=6% Similarity=-0.064 Sum_probs=43.9
Q ss_pred CeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCc--------eeEEEEeecCCEEEEEeCCCeEEEEE
Q 037120 213 GLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGT--------LNSIQLHAENQIIFAAGKHGSIYLWD 284 (489)
Q Consensus 213 ~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~--------v~~~~~~p~~~~l~~~~~dg~i~lwd 284 (489)
.+..++|+|++. +.+. .+|.++-.+..+...... + +-... ..++.|+|+|.+.++ .||.|+-++
T Consensus 42 ~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~~~W--~-~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 42 NFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDNDNW--M-GRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKAS 113 (236)
T ss_dssp TCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTCCH--H-HHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEES
T ss_pred cceeEEECCCcc-EEEE--eCCeEEEECCCCCCcccc--c-ccccEecccccccceEEEECCCCCEEEe--CCCEEEEeC
Confidence 677999999887 5444 677777666654321111 0 00112 478999999987666 679998887
Q ss_pred cCC
Q 037120 285 LRG 287 (489)
Q Consensus 285 ~~~ 287 (489)
-.+
T Consensus 114 pP~ 116 (236)
T 1tl2_A 114 PPQ 116 (236)
T ss_dssp CCC
T ss_pred CCc
Confidence 644
No 322
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=88.62 E-value=8.5 Score=34.30 Aligned_cols=65 Identities=9% Similarity=0.129 Sum_probs=36.5
Q ss_pred CCCcEEEEEeCC-----CcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCC-----eEEEEEcCCCc
Q 037120 222 VNTSRLIASDTH-----GVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHG-----SIYLWDLRGGR 289 (489)
Q Consensus 222 ~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg-----~i~lwd~~~~~ 289 (489)
++. +++.|+.+ ..+.+||+.+.+...+............+ .-++.+++.||.++ .+.+||+.+.+
T Consensus 204 ~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 204 NNL-LYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC--AVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp TTE-EEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCE-EEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE--EECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 455 77777754 46889999886533222111111111122 23677777777643 47888887643
No 323
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=88.55 E-value=17 Score=34.50 Aligned_cols=172 Identities=12% Similarity=0.088 Sum_probs=97.6
Q ss_pred CceeEEEECCCCcEEEEEec-------CCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEee--CCC
Q 037120 97 PGISALDFDCKGIYLVSATR-------SGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWN--LAN 167 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~-------dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~--~~~ 167 (489)
..|..-.-+++.++++..+- .|.+.+|..+....+. +++|... ...+... +..
T Consensus 151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~---------ieGhaa~---------F~~~~~~g~~~~ 212 (494)
T 1bpo_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP---------IEGHAAS---------FAQFKMEGNAEE 212 (494)
T ss_dssp CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEE---------ECCSEEE---------EEEEECTTCSSE
T ss_pred ceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccch---------heeeeee---------eEEEecCCCCCC
Confidence 34777778899998875542 5788999998854443 2222221 1111111 111
Q ss_pred CCEEEEEecC--CCEEEEEEeccC-CCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCC
Q 037120 168 QDEVACASTR--SNVVSIYDIGYI-SDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVG 244 (489)
Q Consensus 168 ~~~l~s~~~d--~g~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~ 244 (489)
..+++-+... .+.++|-++... ...+....+....+.. -..-.+--.++..++... .++--+.-|.|++||+.++
T Consensus 213 ~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fp-pe~~~DFPvamqvs~kyg-viyviTK~G~i~lyDleTg 290 (494)
T 1bpo_A 213 STLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFP-PEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETG 290 (494)
T ss_dssp EEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCC-TTSTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTC
T ss_pred ceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCC-cccccCceeEEEecccCC-EEEEEecCceEEEEecccc
Confidence 1233333321 279999999543 1111111111111101 122234456778888888 8888899999999999998
Q ss_pred CcCceeeccCCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcc
Q 037120 245 VLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRT 290 (489)
Q Consensus 245 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~ 290 (489)
. ++....--...|...+-+....-++.....|.|.--.+.....
T Consensus 291 t--~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 291 T--CIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp C--EEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred e--eeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccc
Confidence 8 5533333355666666655555566666777777666665443
No 324
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=87.57 E-value=9.3 Score=34.04 Aligned_cols=64 Identities=8% Similarity=0.037 Sum_probs=33.4
Q ss_pred CCCcEEEEEeCC-------CcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCC-----CeEEEEEcCCC
Q 037120 222 VNTSRLIASDTH-------GVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKH-----GSIYLWDLRGG 288 (489)
Q Consensus 222 ~~~~~l~s~s~d-------g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----g~i~lwd~~~~ 288 (489)
++. +++.|+.+ ..+.+||+.+.+...+..+........++. -++.+++.||.+ ..+.+||+.+.
T Consensus 155 ~~~-iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 155 GGL-LYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp TTE-EEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred CCE-EEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCC
Confidence 455 66666632 358899998765332211111111112222 256667777654 35677777653
No 325
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=87.54 E-value=17 Score=33.26 Aligned_cols=97 Identities=7% Similarity=0.028 Sum_probs=45.6
Q ss_pred CEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecC-CcccCeeEEEEecCCCcEEEEEeC-C---------CcEE
Q 037120 169 DEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGS-DVQKGLSDLAFSAVNTSRLIASDT-H---------GVVN 237 (489)
Q Consensus 169 ~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~s~-d---------g~i~ 237 (489)
.+++.|+.+...+.+||+.... ......... . .....- +++.. ++. +++.|+. + ..+.
T Consensus 21 ~iyv~GG~~~~~~~~~d~~~~~----~~W~~~~~~----p~~~R~~~-~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~v~ 89 (357)
T 2uvk_A 21 TVYIGLGSAGTAWYKLDTQAKD----KKWTALAAF----PGGPRDQA-TSAFI-DGN-LYVFGGIGKNSEGLTQVFNDVH 89 (357)
T ss_dssp EEEEECGGGTTCEEEEETTSSS----CCEEECCCC----TTCCCBSC-EEEEE-TTE-EEEECCEEECTTSCEEECCCEE
T ss_pred EEEEEeCcCCCeEEEEccccCC----CCeeECCCC----CCCcCccc-eEEEE-CCE-EEEEcCCCCCCCccceeeccEE
Confidence 4667776555788888884211 111111110 1 001111 12222 455 6676665 2 4688
Q ss_pred EEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCC
Q 037120 238 IWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKH 277 (489)
Q Consensus 238 iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d 277 (489)
+||..+.+...+.... ........+...++.+++.||.+
T Consensus 90 ~yd~~~~~W~~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 90 KYNPKTNSWVKLMSHA-PMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp EEETTTTEEEECSCCC-SSCCSSEEEEEETTEEEEEECCC
T ss_pred EEeCCCCcEEECCCCC-CcccccceEEEECCEEEEEeCcC
Confidence 9999886533221111 01111121222577777788754
No 326
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=87.16 E-value=8.5 Score=34.26 Aligned_cols=64 Identities=11% Similarity=0.145 Sum_probs=35.0
Q ss_pred CCCcEEEEEeCC-----CcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCC-----CeEEEEEcCCC
Q 037120 222 VNTSRLIASDTH-----GVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKH-----GSIYLWDLRGG 288 (489)
Q Consensus 222 ~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----g~i~lwd~~~~ 288 (489)
++. +++.|+.+ ..+.+||+.+.+...+...........++. -++.+++.||.+ ..+.+||+.+.
T Consensus 159 ~~~-iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 159 SGV-IYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp TTE-EEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCE-EEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCC
Confidence 555 77777654 468899998865332211111111112222 256666777653 35777887764
No 327
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=86.15 E-value=20 Score=34.45 Aligned_cols=29 Identities=14% Similarity=0.066 Sum_probs=22.3
Q ss_pred ceeEEEECCCCc-EEEEEecCCeEEEEeCC
Q 037120 98 GISALDFDCKGI-YLVSATRSGCLTVHDFE 126 (489)
Q Consensus 98 ~V~~~~fs~~g~-~la~g~~dg~i~vwd~~ 126 (489)
.-..|+|.|+|. .|+++...|.|++++..
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 357899999996 45556778999999754
No 328
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=85.46 E-value=19 Score=31.86 Aligned_cols=65 Identities=12% Similarity=0.094 Sum_probs=36.9
Q ss_pred CCCcEEEEEeCC-----CcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCC-----CeEEEEEcCCCc
Q 037120 222 VNTSRLIASDTH-----GVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKH-----GSIYLWDLRGGR 289 (489)
Q Consensus 222 ~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----g~i~lwd~~~~~ 289 (489)
++. +++.|+.+ ..+.+||+.+.+...+...........++. -++.+++.||.+ ..|.+||+.+.+
T Consensus 206 ~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 206 NDH-IYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp TTE-EEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCE-EEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 455 77777754 468999998865332221111111112222 266777777664 467888887643
No 329
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=85.37 E-value=8.2 Score=34.71 Aligned_cols=64 Identities=8% Similarity=0.120 Sum_probs=35.4
Q ss_pred CCCcEEEEEeCCC-----cEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCC--------------CeEEE
Q 037120 222 VNTSRLIASDTHG-----VVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKH--------------GSIYL 282 (489)
Q Consensus 222 ~~~~~l~s~s~dg-----~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d--------------g~i~l 282 (489)
++. +++.|+.++ .+.+||+.+.+...+...........++. -++.+++.||.+ ..|.+
T Consensus 196 ~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~ 272 (315)
T 4asc_A 196 DGR-IIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS--LVGTLYAIGGFATLETESGELVPTELNDIWR 272 (315)
T ss_dssp TTE-EEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred CCE-EEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE--ECCEEEEECCccccCcCCccccccccCcEEE
Confidence 555 777777544 58889998865332221111111112222 366777777763 24677
Q ss_pred EEcCCC
Q 037120 283 WDLRGG 288 (489)
Q Consensus 283 wd~~~~ 288 (489)
||+.+.
T Consensus 273 yd~~~~ 278 (315)
T 4asc_A 273 YNEEEK 278 (315)
T ss_dssp EETTTT
T ss_pred ecCCCC
Confidence 887764
No 330
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=85.29 E-value=20 Score=31.89 Aligned_cols=65 Identities=11% Similarity=0.137 Sum_probs=37.0
Q ss_pred CCCcEEEEEeCC-----CcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCC-----CeEEEEEcCCCc
Q 037120 222 VNTSRLIASDTH-----GVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKH-----GSIYLWDLRGGR 289 (489)
Q Consensus 222 ~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----g~i~lwd~~~~~ 289 (489)
++. +++.|+.+ ..+.+||+.+.+...+..+........++.+ ++.+++.||.+ ..+.+||+.+.+
T Consensus 200 ~~~-i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 200 KDK-IFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp TTE-EEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred CCE-EEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 455 67776643 4688999988653322111111122223333 67777778753 568888887643
No 331
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=84.48 E-value=6.9 Score=35.08 Aligned_cols=64 Identities=11% Similarity=0.023 Sum_probs=34.8
Q ss_pred CCCcEEEEEeCC-----CcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCC-----CeEEEEEcCCC
Q 037120 222 VNTSRLIASDTH-----GVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKH-----GSIYLWDLRGG 288 (489)
Q Consensus 222 ~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----g~i~lwd~~~~ 288 (489)
++. +++.|+.+ ..+.+||+.+.+...+..+......-.++.+ ++.+++.||.+ ..+.+||+.+.
T Consensus 168 ~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 168 NRL-LYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp TTE-EEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCE-EEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 455 77777654 4688999987653322111111111122222 66666777654 45777887664
No 332
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=83.40 E-value=24 Score=31.32 Aligned_cols=65 Identities=15% Similarity=0.091 Sum_probs=37.1
Q ss_pred CCCcEEEEEeCC----CcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCC------CeEEEEEcCCCc
Q 037120 222 VNTSRLIASDTH----GVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKH------GSIYLWDLRGGR 289 (489)
Q Consensus 222 ~~~~~l~s~s~d----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d------g~i~lwd~~~~~ 289 (489)
++. +++.|+.+ ..+.+||..+.+...+..+........++. -++.+++.||.+ ..+.+||+.+.+
T Consensus 55 ~~~-lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 55 DNV-VYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp TTE-EEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred CCE-EEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 455 77777754 678899998865332211111111112222 266677777654 458888988754
No 333
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=82.48 E-value=30 Score=31.75 Aligned_cols=111 Identities=8% Similarity=-0.061 Sum_probs=60.0
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeec-eeeeeecCCcccCeeEEEEecC---CCcEEEEEe--
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTR-RSVTVVGSDVQKGLSDLAFSAV---NTSRLIASD-- 231 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~---~~~~l~s~s-- 231 (489)
-..++|.|++. ++++--.. |.|++++...+ .. ..+... ..+ .........|+++|+ +..++++-+
T Consensus 34 P~~ia~~pdG~-llVter~~-G~I~~v~~~~g--~~-~~v~~~~~v~----~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 34 PWGLAPLPGGD-LLVSSRDE-ATITRVDAKTG--RK-TELGEVPGVS----PSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EEEEEECTTSC-EEEEETTT-CEEEEECTTTC--CE-EEEEECTTCC----CBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred ceEEEEcCCCc-EEEEEecC-CEEEEEECCCC--cE-eeecccCcee----ecCCCCceeeEeccccccCCEEEEEEecC
Confidence 56799999985 66555435 89998875322 11 111111 111 223457899999996 331434322
Q ss_pred CCCcEEEEECCCCC--------cC-ceeecc-CCCCceeEEEEeecCCEEEEEeCC
Q 037120 232 THGVVNIWDRRVGV--------LP-SLELST-GSHGTLNSIQLHAENQIIFAAGKH 277 (489)
Q Consensus 232 ~dg~i~iwd~~~~~--------~~-~~~~~~-~h~~~v~~~~~~p~~~~l~~~~~d 277 (489)
.++.|.-|.+.... .. ++..+. .....-..|+|.|+|.+.++.+..
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~ 160 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGES 160 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCT
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCC
Confidence 45566666655411 11 111111 111234579999999877776653
No 334
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=80.49 E-value=51 Score=36.58 Aligned_cols=170 Identities=11% Similarity=0.079 Sum_probs=93.1
Q ss_pred eeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEecC-
Q 037120 99 ISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACASTR- 177 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~d- 177 (489)
|.--.|-.+ +.|+..+. ..|.-|++.......+ .+..+..+ .+.+|..-.-+++.+.++++|-..
T Consensus 108 VvfWkWis~-~~l~lVT~-~aVyHW~~~~~s~P~k-------~fdR~~~L-----~~~QIinY~~d~~~kW~~l~gi~~~ 173 (1630)
T 1xi4_A 108 VTFWKWISL-NTVALVTD-NAVYHWSMEGESQPVK-------MFDRHSSL-----AGCQIINYRTDAKQKWLLLTGISAQ 173 (1630)
T ss_pred ceEEEecCC-CeeEEEcC-CeEEEeccCCCCccHH-------HHhcchhc-----ccCeeEEeeeCCCCCeEEEEeeccC
Confidence 444444322 34555554 4688899965111110 11222222 234477778888888777776421
Q ss_pred ----CCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEe--cCCCcEEEEEeC---CCcEEEEECCCC--Cc
Q 037120 178 ----SNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFS--AVNTSRLIASDT---HGVVNIWDRRVG--VL 246 (489)
Q Consensus 178 ----~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~~l~s~s~---dg~i~iwd~~~~--~~ 246 (489)
.|.+.+|.+....+. .+.||......+... +....+|+.+.. .+.++|-++... ..
T Consensus 174 ~~~v~G~mQLyS~er~~sQ-------------~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~ 240 (1630)
T 1xi4_A 174 QNRVVGAMQLYSVDRKVSQ-------------PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN 240 (1630)
T ss_pred CCcccceeeeeecccccch-------------hhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCC
Confidence 278888888432211 125555444443332 111113333322 368999988653 11
Q ss_pred Cc-----eeeccC---CCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceee
Q 037120 247 PS-----LELSTG---SHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFH 295 (489)
Q Consensus 247 ~~-----~~~~~~---h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~ 295 (489)
+. +..+.. -.+--.++..++.-..++.-+.-|.|.+||+.++.++..-.
T Consensus 241 ~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 241 QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred CCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhcc
Confidence 11 111111 12334478888888888999999999999999998855433
No 335
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=79.68 E-value=9.4 Score=34.36 Aligned_cols=64 Identities=9% Similarity=0.133 Sum_probs=33.5
Q ss_pred CCCcEEEEEeCC-----CcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCC--------------CeEEE
Q 037120 222 VNTSRLIASDTH-----GVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKH--------------GSIYL 282 (489)
Q Consensus 222 ~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d--------------g~i~l 282 (489)
++. +++.|+.+ ..+.+||+.+.+...+............+ .-++.+++.||.+ ..+.+
T Consensus 206 ~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~ 282 (318)
T 2woz_A 206 KGK-IVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLV--SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWK 282 (318)
T ss_dssp TTE-EEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEE--EETTEEEEECCBCCBC----CCBCCBCCCEEE
T ss_pred CCE-EEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEE--EECCEEEEECCeeccCCCCceeccceeeeEEE
Confidence 455 77777643 35778999887543222111111111222 2356666776653 34667
Q ss_pred EEcCCC
Q 037120 283 WDLRGG 288 (489)
Q Consensus 283 wd~~~~ 288 (489)
||+.+.
T Consensus 283 yd~~~~ 288 (318)
T 2woz_A 283 YEDDKK 288 (318)
T ss_dssp EETTTT
T ss_pred EeCCCC
Confidence 777654
No 336
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=78.52 E-value=36 Score=30.24 Aligned_cols=64 Identities=14% Similarity=0.103 Sum_probs=35.7
Q ss_pred CCCcEEEEEeCC-----CcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCC-----CeEEEEEcCCC
Q 037120 222 VNTSRLIASDTH-----GVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKH-----GSIYLWDLRGG 288 (489)
Q Consensus 222 ~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----g~i~lwd~~~~ 288 (489)
++. +++.|+.+ ..+.+||+.+.+...+..+........++. -++.+++.||.+ ..+.+||+.+.
T Consensus 215 ~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 215 HNC-IYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp TTE-EEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCE-EEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 455 77777654 568999998865332211111111112222 266777777653 45778888764
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=76.76 E-value=65 Score=32.78 Aligned_cols=164 Identities=9% Similarity=0.021 Sum_probs=76.3
Q ss_pred eeEEEECCCCcEEEEEecCC------eEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEE
Q 037120 99 ISALDFDCKGIYLVSATRSG------CLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVA 172 (489)
Q Consensus 99 V~~~~fs~~g~~la~g~~dg------~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~ 172 (489)
-.++.+..++.+++.|+.++ .+.+||..+..-.... . .+... . -.+++...++ .+++
T Consensus 443 hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~------~-~p~~R-~--------~h~~~~~~~~-~iyv 505 (695)
T 2zwa_A 443 HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIK------S-LSHTR-F--------RHSACSLPDG-NVLI 505 (695)
T ss_dssp CEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECC------C-CSBCC-B--------SCEEEECTTS-CEEE
T ss_pred eEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECC------C-CCCCc-c--------cceEEEEcCC-EEEE
Confidence 34444433778888887643 4778888773322210 0 00000 0 1112222244 4677
Q ss_pred EEecCCC-EEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecC-CCcEEEEEeC--C-----CcEEEEECCC
Q 037120 173 CASTRSN-VVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAV-NTSRLIASDT--H-----GVVNIWDRRV 243 (489)
Q Consensus 173 s~~~d~g-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~s~s~--d-----g~i~iwd~~~ 243 (489)
.|+.+.. .+.+||.....-. .+...... .........+.+..+ +. +++.|+. + ..+.+||+.+
T Consensus 506 ~GG~~~~~~v~~yd~~t~~W~---~~~~~g~~----p~~r~~~~a~v~~~~~~~-iyv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 506 LGGVTEGPAMLLYNVTEEIFK---DVTPKDEF----FQNSLVSAGLEFDPVSKQ-GIILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp ECCBCSSCSEEEEETTTTEEE---ECCCSSGG----GGSCCBSCEEEEETTTTE-EEEECCBCTTSSCBCCEEEEEEECT
T ss_pred ECCCCCCCCEEEEECCCCceE---EccCCCCC----CCcccceeEEEEeCCCCE-EEEECCcCCCCCeeeCcEEEEEccC
Confidence 6665422 6888888432111 00000000 001112233445555 44 6777764 2 4588999988
Q ss_pred CCc------Cceeec-cCCCCceeEEEEeecCCEEEEEeCC--------CeEEEEEcCCC
Q 037120 244 GVL------PSLELS-TGSHGTLNSIQLHAENQIIFAAGKH--------GSIYLWDLRGG 288 (489)
Q Consensus 244 ~~~------~~~~~~-~~h~~~v~~~~~~p~~~~l~~~~~d--------g~i~lwd~~~~ 288 (489)
... ..+... ...... .+++...++.+++.||.+ ..|.+||+.+.
T Consensus 578 ~~w~~~~~W~~~~~~p~~~R~~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 578 ENATEPITVIKKLQHPLFQRYG-SQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp TCSSCCEEEEEEEECGGGCCBS-CEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred CccccceEEEEcCCCCCCCccc-ceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 762 111110 000111 123333336777777742 34777777764
No 338
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=75.34 E-value=48 Score=31.75 Aligned_cols=117 Identities=12% Similarity=-0.036 Sum_probs=59.3
Q ss_pred eeEEEeeCCCC-CEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeec-CCcccCeeEEEEecC----CCcEEEEEe
Q 037120 158 LDAVRWNLANQ-DEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVG-SDVQKGLSDLAFSAV----NTSRLIASD 231 (489)
Q Consensus 158 V~~v~~~~~~~-~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~----~~~~l~s~s 231 (489)
-..|+|.|++. .++++- .. |.|++++..... ....++.....+.... .........|+|+|+ +. ++++-+
T Consensus 16 P~~~a~~pdG~~rl~V~e-r~-G~i~~~~~~g~~-~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~-lYv~yt 91 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILE-KE-GYVKILTPEGEI-FKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGK-LYVSYT 91 (463)
T ss_dssp EEEEECCSSSSCCEEEEE-TT-TEEEEECTTSCB-CSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCE-EEEEEE
T ss_pred ceEEEECCCCCeEEEEEe-CC-ceEEEEeCCCCe-eeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCE-EEEEEe
Confidence 55699999985 355554 45 999999752111 1111111111110000 012457889999996 33 444433
Q ss_pred C--C----------CcEEEEECCCC--C-------cCceeec-cCCCCceeEEEEeecCCEEEEEeCCC
Q 037120 232 T--H----------GVVNIWDRRVG--V-------LPSLELS-TGSHGTLNSIQLHAENQIIFAAGKHG 278 (489)
Q Consensus 232 ~--d----------g~i~iwd~~~~--~-------~~~~~~~-~~h~~~v~~~~~~p~~~~l~~~~~dg 278 (489)
. + ..|.-|.+..+ . +.++... .........|+|.|||.+.++.|..+
T Consensus 92 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 92 TNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp ECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 2 1 13444655431 1 1112211 11122357899999998777777643
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=75.21 E-value=30 Score=31.49 Aligned_cols=55 Identities=11% Similarity=0.149 Sum_probs=28.6
Q ss_pred cEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCC------eEEEEEcCCCccc
Q 037120 235 VVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHG------SIYLWDLRGGRTS 291 (489)
Q Consensus 235 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg------~i~lwd~~~~~~~ 291 (489)
.+.+||+.+.+...+..+...... ..+..-++++++.||.++ .|.++++++.+.+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAY--GVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBS--SEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCE
T ss_pred eEEEEecCCCceeeCCCCCCCccc--ceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeE
Confidence 578999988764433222211111 222334778888888632 4666688877653
No 340
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=74.18 E-value=48 Score=29.52 Aligned_cols=64 Identities=16% Similarity=0.249 Sum_probs=34.1
Q ss_pred CCCcEEEEEeC------CCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCC-----CeEEEEEcCCC
Q 037120 222 VNTSRLIASDT------HGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKH-----GSIYLWDLRGG 288 (489)
Q Consensus 222 ~~~~~l~s~s~------dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----g~i~lwd~~~~ 288 (489)
++. +++.|+. -..+.+||..+.+...+.......... +++. -++.+++.||.+ ..+.+||+.+.
T Consensus 158 ~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 158 NGM-IYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMF-GVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp TTE-EEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred CCE-EEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccc-eEEE-ECCEEEEEcCcCCCCccceEEEEECCCC
Confidence 555 6666663 235899999886533221111111111 2222 366777777652 34667887764
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=73.32 E-value=25 Score=35.93 Aligned_cols=68 Identities=7% Similarity=0.090 Sum_probs=39.0
Q ss_pred cCCCcEEEEEeCCC--cEEEEECCCCCcCceee---ccCCCCceeEEEEeec-CCEEEEEeC--C-----CeEEEEEcCC
Q 037120 221 AVNTSRLIASDTHG--VVNIWDRRVGVLPSLEL---STGSHGTLNSIQLHAE-NQIIFAAGK--H-----GSIYLWDLRG 287 (489)
Q Consensus 221 ~~~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~---~~~h~~~v~~~~~~p~-~~~l~~~~~--d-----g~i~lwd~~~ 287 (489)
.++. +++.|+.++ .+.+||..+.....+.. .......-.++.++.+ +..++.||. + +.+.+||+.+
T Consensus 499 ~~~~-iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 499 PDGN-VLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp TTSC-EEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT
T ss_pred cCCE-EEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC
Confidence 3666 778887544 79999998865432211 1111122234555555 566666665 2 3577778776
Q ss_pred Cc
Q 037120 288 GR 289 (489)
Q Consensus 288 ~~ 289 (489)
..
T Consensus 578 ~~ 579 (695)
T 2zwa_A 578 EN 579 (695)
T ss_dssp TC
T ss_pred Cc
Confidence 44
No 342
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=72.35 E-value=26 Score=34.44 Aligned_cols=74 Identities=7% Similarity=-0.030 Sum_probs=50.0
Q ss_pred CeeEEEEecCCCcEEEEEeCCCcEEEEECCCC------Cc--C--ceeeccCCCCceeEEEEeecCCEEEEEeC-CCeEE
Q 037120 213 GLSDLAFSAVNTSRLIASDTHGVVNIWDRRVG------VL--P--SLELSTGSHGTLNSIQLHAENQIIFAAGK-HGSIY 281 (489)
Q Consensus 213 ~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~------~~--~--~~~~~~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~ 281 (489)
....+..+|||++.++++-.+.++.++|++.- +. + ++.....-.-.....+|+++| +.++.-. |..|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeeeeecceEE
Confidence 44568899999955566668999999998842 10 0 110111112345678999999 6666665 99999
Q ss_pred EEEcCC
Q 037120 282 LWDLRG 287 (489)
Q Consensus 282 lwd~~~ 287 (489)
-|++..
T Consensus 403 kWni~~ 408 (638)
T 3sbq_A 403 KWNMEE 408 (638)
T ss_dssp EEEHHH
T ss_pred EEeccH
Confidence 999974
No 343
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=69.84 E-value=61 Score=28.90 Aligned_cols=64 Identities=8% Similarity=0.001 Sum_probs=40.4
Q ss_pred EEecCCCcEEEEEe----CCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeC-CCeEEEEEcCCCc
Q 037120 218 AFSAVNTSRLIASD----THGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGK-HGSIYLWDLRGGR 289 (489)
Q Consensus 218 ~~~~~~~~~l~s~s----~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~-dg~i~lwd~~~~~ 289 (489)
.|+++++ .|+-.. ....|...++..... . .+..+.. .+++|+++.|+-.+. ...|..-++..+.
T Consensus 110 ~~s~~g~-~Iy~~~~~~~~~~~Iy~~~~dGs~~--~-~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~ 178 (302)
T 3s25_A 110 YASLIGN-YIYYLHYDTQTATSLYRIRIDGEEK--K-KIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQS 178 (302)
T ss_dssp EEEEETT-EEEEEEESSSSCEEEEEEETTSCCC--E-EEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTE
T ss_pred EEEEeCC-EEEEEeecCCCCceEEEEECCCCCe--E-EEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCC
Confidence 6778888 555444 345566667764332 2 2222222 457889999887766 6788888887654
No 344
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=68.88 E-value=44 Score=35.51 Aligned_cols=33 Identities=9% Similarity=0.110 Sum_probs=28.1
Q ss_pred cCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCC
Q 037120 212 KGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGV 245 (489)
Q Consensus 212 ~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~ 245 (489)
..+.+++..++.. ++++-+.|+++|+|++.+++
T Consensus 236 ~~~~~~~~~~~~~-~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 236 NTIISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp TCEEEEEEETTTT-EEEEEETTCEEEEEETTTTE
T ss_pred ceEEEEeecCCCc-EEEEEECCCEEEEEECCCCC
Confidence 3567777777777 99999999999999999876
No 345
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=68.52 E-value=64 Score=28.62 Aligned_cols=64 Identities=13% Similarity=0.192 Sum_probs=35.3
Q ss_pred CCCcEEEEEeC-C-----CcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCCC-----eEEEEEcCCC
Q 037120 222 VNTSRLIASDT-H-----GVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKHG-----SIYLWDLRGG 288 (489)
Q Consensus 222 ~~~~~l~s~s~-d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg-----~i~lwd~~~~ 288 (489)
++. +++.|+. + ..+.+||..+.+...+.........-.++. -++.+++.||.++ .+.+||+.+.
T Consensus 148 ~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 148 MDL-VYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TTE-EEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCE-EEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCC
Confidence 455 7777775 2 468899998765332211111111112222 2677777777643 5777887764
No 346
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=59.79 E-value=11 Score=40.20 Aligned_cols=38 Identities=11% Similarity=0.140 Sum_probs=32.5
Q ss_pred CceeEEEEeecCCEEEEEeCCCeEEEEEcCCCccccee
Q 037120 257 GTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPF 294 (489)
Q Consensus 257 ~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~ 294 (489)
..+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 35677888888899999999999999999999886554
No 347
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=58.18 E-value=2.1e+02 Score=31.11 Aligned_cols=112 Identities=14% Similarity=0.129 Sum_probs=64.6
Q ss_pred eeEEEeeCCCCCEEEEEecCCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCC-----CcEEEEEeC
Q 037120 158 LDAVRWNLANQDEVACASTRSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVN-----TSRLIASDT 232 (489)
Q Consensus 158 V~~v~~~~~~~~~l~s~~~d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-----~~~l~s~s~ 232 (489)
|.+.+.+.. .++.+. + +.+.++++..+ . +..... .. -...|.++++.|.. ..+++.|..
T Consensus 516 I~~As~n~~---~vvva~-g-~~l~~fel~~~-----~-L~~~~~--~~---l~~evscl~i~~~~~~~~~s~~~aVg~~ 579 (1158)
T 3ei3_A 516 ISVASCNSS---QVVVAV-G-RALYYLQIHPQ-----E-LRQISH--TE---MEHEVACLDITPLGDSNGLSPLCAIGLW 579 (1158)
T ss_dssp CCEEEECSS---EEEEEE-T-TEEEEEEEETT-----E-EEEEEE--EE---CSSCEEEEECCCCSSSTTCCSEEEEEET
T ss_pred EEEEEeCCC---EEEEEE-C-CEEEEEEeeCC-----c-eeeecc--cC---CCCceEEEEeecCCCCcccccEEEEEEC
Confidence 666665542 444445 3 88988888431 1 111111 11 23479999987643 137888885
Q ss_pred -CCcEEEEECCCCCcCceeeccCCCCceeEEEEee--cCCEEEEEeCCCeEEEEEcC
Q 037120 233 -HGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHA--ENQIIFAAGKHGSIYLWDLR 286 (489)
Q Consensus 233 -dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p--~~~~l~~~~~dg~i~lwd~~ 286 (489)
|++|+|+++..-+....+.+ +-+....++.+.. ...+|++|-.||.+.-+.+.
T Consensus 580 ~d~tv~I~sL~~l~~~~~~~L-~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 580 TDISARILKLPSFELLHKEML-GGEIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp TTTEEEEEETTTCCEEEEEEC-CSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred CCCEEEEEECCCCCeEEEEEC-CCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 99999999986442111112 1123445555543 33578888889987655543
No 348
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=57.61 E-value=1.2e+02 Score=28.09 Aligned_cols=84 Identities=8% Similarity=0.081 Sum_probs=47.2
Q ss_pred CCceeEEEEe---ec----CCEEEEEeC-CCeEEEEEcCCCcccceeecCCccCCCCeeEEEeCCCCcceeeccccceee
Q 037120 256 HGTLNSIQLH---AE----NQIIFAAGK-HGSIYLWDLRGGRTSAPFHNHKEVCHLPLTSLKLASMLEKIGTLKAQSKIV 327 (489)
Q Consensus 256 ~~~v~~~~~~---p~----~~~l~~~~~-dg~i~lwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~~~~~~~~ 327 (489)
...+..+.++ |. +.+++.+.. .+-|.++|+.+++.-+.+. ... .|-....|.-+|..+ ..
T Consensus 151 ~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~--~~~--~pd~~~~~~i~G~~~--------~~ 218 (381)
T 3q6k_A 151 PTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTH--PTF--KAERPTKFDYGGKEY--------EF 218 (381)
T ss_dssp GGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEEC--GGG--SCCSCEEEEETTEEE--------EE
T ss_pred CCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEcc--CCC--ccccCcceEECCEEe--------Ee
Confidence 3567888888 22 456666644 7889999999988654442 111 000011111122211 23
Q ss_pred ccceeEEEeCCC----CCeEEEEEecCC
Q 037120 328 SQEIHSIDLDPS----CSYQLAFHLDDG 351 (489)
Q Consensus 328 ~~~i~~~~~~p~----~~~~~~~~~~~~ 351 (489)
...+..|+++|+ ++.+....+.+.
T Consensus 219 ~~Gi~gIaLsp~~~~~~~~LYf~plss~ 246 (381)
T 3q6k_A 219 KAGIFGITLGDRDSEGNRPAYYLAGSAI 246 (381)
T ss_dssp CCCEEEEEECCCCTTSCCEEEEEESSCS
T ss_pred ccCceEEEecCCcCCCCeEEEEEECCCC
Confidence 457889999998 566655555543
No 349
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=55.90 E-value=16 Score=33.36 Aligned_cols=65 Identities=17% Similarity=0.282 Sum_probs=40.3
Q ss_pred eCCCcEEEEECCCCCcCceeecc---CCCCceeE----EEEee----cCCEEEEEeCCCeEEEEEcCCCcccceeec
Q 037120 231 DTHGVVNIWDRRVGVLPSLELST---GSHGTLNS----IQLHA----ENQIIFAAGKHGSIYLWDLRGGRTSAPFHN 296 (489)
Q Consensus 231 s~dg~i~iwd~~~~~~~~~~~~~---~h~~~v~~----~~~~p----~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~ 296 (489)
+.||.|..+|..++... +.... -...++.. +...+ .+..+++|+.+|.+...|+++|+.+..+..
T Consensus 64 ~~dG~l~a~~~~~G~~~-~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 64 FGDGNIYYFNAHQGLQK-LPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp STTTEEEEEETTTEEEE-EEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred CCCCEEEEEECCCCcEE-eeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 57999999998876422 11111 01111111 00001 456788999999999999999998777763
No 350
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=55.87 E-value=1.1e+02 Score=27.16 Aligned_cols=67 Identities=4% Similarity=0.035 Sum_probs=40.0
Q ss_pred EEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccCCCCceeEEEEeecCCEEEEEeCC--CeEEEEEcCCCc
Q 037120 217 LAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTGSHGTLNSIQLHAENQIIFAAGKH--GSIYLWDLRGGR 289 (489)
Q Consensus 217 ~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d--g~i~lwd~~~~~ 289 (489)
.+|.++++.++.+......|..-++..+.... ... +... ..+.|++.+|+-.... ..|..-++....
T Consensus 150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~--l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 150 FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL--FYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN 218 (302)
T ss_dssp CCSEEETTEEEEECTTTCCEEEEETTTTEEEE--EEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC
T ss_pred eEeeEECCEEEEEeCCCceEEEEECCCCCEEE--EeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC
Confidence 34577888444444446788888887654222 222 2222 3467999998877553 367666766543
No 351
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=55.51 E-value=29 Score=31.69 Aligned_cols=61 Identities=10% Similarity=0.126 Sum_probs=35.4
Q ss_pred EEEEEeCCCcEEEEECCCCCcCceeecc-CCC-Cc-----eeEEEEe-----ecCCEEEEEeCCCeEEEEEcCCCc
Q 037120 226 RLIASDTHGVVNIWDRRVGVLPSLELST-GSH-GT-----LNSIQLH-----AENQIIFAAGKHGSIYLWDLRGGR 289 (489)
Q Consensus 226 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~-~h~-~~-----v~~~~~~-----p~~~~l~~~~~dg~i~lwd~~~~~ 289 (489)
.+++++.+|.+...|+++|+. +-.+. +.. .. ..|.... -.+..++.+..+..+.+.+ ++|+
T Consensus 113 ~Vy~Gs~~g~l~ald~~tG~~--~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~ 185 (339)
T 2be1_A 113 KVYTGSMRTIMYTINMLNGEI--ISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGA 185 (339)
T ss_dssp EEEECEEEEEEEEEETTTCCE--EEEESTTCBCC--------------------CCEEEEEEEEEECEECC-TTSC
T ss_pred EEEEEecCCEEEEEECCCCcE--EEEEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC-CCCC
Confidence 789999999999999999873 32222 110 10 1112111 1245677877787888777 5553
No 352
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=50.34 E-value=11 Score=41.07 Aligned_cols=38 Identities=11% Similarity=0.140 Sum_probs=31.2
Q ss_pred ceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceee
Q 037120 258 TLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFH 295 (489)
Q Consensus 258 ~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~ 295 (489)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44566677888999999999999999999998865543
No 353
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=50.24 E-value=2.2e+02 Score=28.97 Aligned_cols=180 Identities=13% Similarity=0.115 Sum_probs=94.2
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
..|.++..+.+|. |-.|+.+| +..||..+....... . ... ..|.++... ++ .|-.++.
T Consensus 63 ~~i~~i~~d~~g~-lWigT~~G-l~~yd~~~~~f~~~~--------~------~~~---~~i~~i~~~-~g--~lWigt~ 120 (758)
T 3ott_A 63 TRIYCGVIIDNTY-LYMGTDNG-ILVYNYRADRYEQPE--------T------DFP---TDVRTMALQ-GD--TLWLGAL 120 (758)
T ss_dssp SCEEEEEEETTTE-EEEEETTE-EEEEETTTTEECCCS--------C------CCC---SCEEEEEEE-TT--EEEEEET
T ss_pred ceEEEEEEcCCCc-EEEEeCCC-eEEEeCCCCEEECcc--------c------CCC---ceEEEEEec-CC--cEEEEcC
Confidence 4589988888875 44566665 678998774322100 0 001 116666543 33 4444552
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeeccC--
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELSTG-- 254 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-- 254 (489)
+-|..+|..... ...+.... . .-....|.++....++. + ..++.+ -|..+|..+.+.........
T Consensus 121 --~Gl~~~~~~~~~---~~~~~~~~---~--~l~~~~i~~i~~d~~g~-l-Wigt~~-Gl~~~~~~~~~~~~~~~~~~~~ 187 (758)
T 3ott_A 121 --NGLYTYQLQSRK---LTSFDTRR---N--GLPNNTIYSIIRTKDNQ-I-YVGTYN-GLCRYIPSNGKFEGIPLPVHSS 187 (758)
T ss_dssp --TEEEEEETTTCC---EEEECHHH---H--CCSCSCEEEEEECTTCC-E-EEEETT-EEEEEETTTTEEEEECCCCCTT
T ss_pred --CcceeEeCCCCe---EEEeccCC---C--CcCCCeEEEEEEcCCCC-E-EEEeCC-CHhhCccCCCceEEecCCCccc
Confidence 467788873211 01110000 0 11124688887777776 4 445544 57788877643111111000
Q ss_pred -CCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceee-cCCccCCCCeeEEEeCCCCcce
Q 037120 255 -SHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFH-NHKEVCHLPLTSLKLASMLEKI 317 (489)
Q Consensus 255 -h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~-~~~~~~~~~v~~l~~~~~~~~i 317 (489)
....|.++...+++..|..|+. +-+..+|..+++. ..+. ..... |.++....+|...
T Consensus 188 ~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~-~~~~~l~~~~----i~~i~~d~~g~lW 246 (758)
T 3ott_A 188 QSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQI-KQTEAFHNNS----IKSLALDGNGDLL 246 (758)
T ss_dssp CSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEE-EEEEEEEEEE----EEEEEECTTCCEE
T ss_pred cccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeE-EeccCCCCCe----EEEEEEcCCCCEE
Confidence 1234888888877776666654 4688899876543 1111 11222 7777777666544
No 354
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=45.88 E-value=23 Score=35.85 Aligned_cols=37 Identities=8% Similarity=0.243 Sum_probs=28.9
Q ss_pred ceeEEEEeecCCEEEEEeCCCeEEEEEcCCCcccceeec
Q 037120 258 TLNSIQLHAENQIIFAAGKHGSIYLWDLRGGRTSAPFHN 296 (489)
Q Consensus 258 ~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~~~~~~~~ 296 (489)
.|.++.+ +..++++-+.|.++|+||+++++++.+..-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3554444 578999999999999999999988665543
No 355
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=41.97 E-value=2.9e+02 Score=28.02 Aligned_cols=172 Identities=8% Similarity=0.017 Sum_probs=88.0
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccCCCCCCCCCcccccccccCCCCCCceeEEEeeCCCCCEEEEEec
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCNGTLPGVGLKEDQSKHLLHIPLPQQLDAVRWNLANQDEVACAST 176 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~~~~~~~g~~~~~~~~~~h~~~~~~V~~v~~~~~~~~~l~s~~~ 176 (489)
..|.++.-+.+|++.+ |+ ++-|..||..+....... ...... ... ...|.++....++ .|-.|+.
T Consensus 373 ~~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~~~~------~~~~~~--~~~---~~~v~~i~~d~~g--~lWigT~ 437 (758)
T 3ott_A 373 NRIRHIYEDKEQQLWI-AT-DGSINRYDYATRQFIHYN------IVDNTG--TYN---TNWTYYIFEDTAG--QLWISTC 437 (758)
T ss_dssp SCEEEEEECTTSCEEE-EE-TTEEEEEETTTTEEEEEE------EECCC----CB---SSSEEEEEECTTS--EEEEEES
T ss_pred CceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcEEEee------cCCCcC--CCC---CceEEEEEEcCCC--CEEEEEC
Confidence 3489999898887665 44 456888998774332210 000000 000 1127777766654 4444554
Q ss_pred CCCEEEEEEeccCCCCCceeeeeceeeeeecCCcccCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceeecc---
Q 037120 177 RSNVVSIYDIGYISDEPVEVLKTRRSVTVVGSDVQKGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLELST--- 253 (489)
Q Consensus 177 d~g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~--- 253 (489)
. +-|.++|...........+.....+.....-....|.++...++|. +-+.++..+-|..+|..+++ ......
T Consensus 438 ~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWi~~~t~~Gl~~~d~~~~~--~~~~~~~~~ 513 (758)
T 3ott_A 438 L-GGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGN-VWVLLYNNKGIDKINPRTRE--VTKLFADEL 513 (758)
T ss_dssp S-SCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSC-EEEEETTCSSEEEEETTTTE--EEEECTTTS
T ss_pred C-CceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCC-EEEEccCCCCcEEEeCCCCc--eEEecCCCc
Confidence 3 5677888632100000001000000000001123588888888777 55434444568889987654 221111
Q ss_pred CCCCceeEEEEeecCCEEEEEeCCCeEEEEEcCCCc
Q 037120 254 GSHGTLNSIQLHAENQIIFAAGKHGSIYLWDLRGGR 289 (489)
Q Consensus 254 ~h~~~v~~~~~~p~~~~l~~~~~dg~i~lwd~~~~~ 289 (489)
.....+.++....+|.+-+. +..| |..||..+.+
T Consensus 514 ~~~~~~~~i~~d~~g~lWig-t~~G-l~~~~~~~~~ 547 (758)
T 3ott_A 514 TGEKSPNYLLCDEDGLLWVG-FHGG-VMRINPKDES 547 (758)
T ss_dssp CGGGCEEEEEECTTSCEEEE-ETTE-EEEECC--CC
T ss_pred CCCcccceEEECCCCCEEEE-ecCc-eEEEecCCCc
Confidence 11246788888888876654 4454 7888877654
No 356
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=40.04 E-value=2.2e+02 Score=26.03 Aligned_cols=72 Identities=14% Similarity=0.137 Sum_probs=35.9
Q ss_pred cCeeEEEEecCCCcEEEEEeCCCcEEEEECCCCCcCceee-cc-CC--------CCceeEEEEeec-CCEEEEEeCCCeE
Q 037120 212 KGLSDLAFSAVNTSRLIASDTHGVVNIWDRRVGVLPSLEL-ST-GS--------HGTLNSIQLHAE-NQIIFAAGKHGSI 280 (489)
Q Consensus 212 ~~v~~~~~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-~~-~h--------~~~v~~~~~~p~-~~~l~~~~~dg~i 280 (489)
..|.+|.+.|..+..++.+..++.|...+-.......+.. .. .+ ...+.++.++|. ...++++...+ |
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l 255 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-I 255 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-E
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-E
Confidence 3578899988543345555444544443222111111100 00 00 124889999986 35666665544 5
Q ss_pred EEEE
Q 037120 281 YLWD 284 (489)
Q Consensus 281 ~lwd 284 (489)
...+
T Consensus 256 ~~s~ 259 (394)
T 3b7f_A 256 YRMD 259 (394)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 4444
No 357
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=37.80 E-value=86 Score=31.09 Aligned_cols=58 Identities=14% Similarity=0.175 Sum_probs=38.8
Q ss_pred eeEEEEecCCCcEEEEEeCC------------CcEEEEECCCCCcCceeecc-CCCCceeEEEEeecCCEEEEE
Q 037120 214 LSDLAFSAVNTSRLIASDTH------------GVVNIWDRRVGVLPSLELST-GSHGTLNSIQLHAENQIIFAA 274 (489)
Q Consensus 214 v~~~~~~~~~~~~l~s~s~d------------g~i~iwd~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~~~ 274 (489)
.-.|+|.|.|. +++.-..+ +.+.+.+..+++ ..+.+. .-..+++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~--~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGE--IRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTTCC--EEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCCCe--EEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 35689999998 65554432 235555666655 333333 335789999999999998876
No 358
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=37.13 E-value=48 Score=33.61 Aligned_cols=35 Identities=26% Similarity=0.282 Sum_probs=28.5
Q ss_pred CceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccC
Q 037120 97 PGISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCN 133 (489)
Q Consensus 97 ~~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~ 133 (489)
..|.|+.+. ..+|++-+.|+++|+|++.++.+...
T Consensus 222 ~~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 222 SVISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp CEEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred ceEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEe
Confidence 347777664 67999999999999999999876554
No 359
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=36.12 E-value=1.3e+02 Score=29.62 Aligned_cols=61 Identities=15% Similarity=0.198 Sum_probs=40.8
Q ss_pred cCeeEEEEecCCCcEEEEEeC------------CCcEEEEECCCCCcCceeeccC-CCCceeEEEEeecCCEEEEEe
Q 037120 212 KGLSDLAFSAVNTSRLIASDT------------HGVVNIWDRRVGVLPSLELSTG-SHGTLNSIQLHAENQIIFAAG 275 (489)
Q Consensus 212 ~~v~~~~~~~~~~~~l~s~s~------------dg~i~iwd~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~~~~ 275 (489)
.....|.|.++|. +.+.... .+.|..+|..+++ +...... ....++.++|+||++.|++.-
T Consensus 476 nsPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGe--l~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGE--IRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTTCC--EEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCCCe--EEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4567899999998 5553321 1256677776666 3323322 245789999999999988874
No 360
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=30.09 E-value=32 Score=37.45 Aligned_cols=36 Identities=19% Similarity=-0.006 Sum_probs=30.4
Q ss_pred ceeEEEECCCCcEEEEEecCCeEEEEeCCCcccccC
Q 037120 98 GISALDFDCKGIYLVSATRSGCLTVHDFESLYYQCN 133 (489)
Q Consensus 98 ~V~~~~fs~~g~~la~g~~dg~i~vwd~~~~~~~~~ 133 (489)
.+.+++..++..++++-+.|+++|||++.++.++..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 356677778889999999999999999999877654
No 361
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=23.93 E-value=1.5e+02 Score=29.41 Aligned_cols=15 Identities=0% Similarity=0.217 Sum_probs=11.5
Q ss_pred eEEEEeecCCEEEEE
Q 037120 260 NSIQLHAENQIIFAA 274 (489)
Q Consensus 260 ~~~~~~p~~~~l~~~ 274 (489)
--|+|+|.|.++++.
T Consensus 479 DNL~fd~~G~LwI~e 493 (592)
T 3zwu_A 479 DGLGFDKAGRLWILT 493 (592)
T ss_dssp EEEEECTTCCEEEEE
T ss_pred cceEECCCCCEEEEe
Confidence 468899999866655
Done!