BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037121
(683 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 555 bits (1429), Expect = e-157, Method: Compositional matrix adjust.
Identities = 293/694 (42%), Positives = 446/694 (64%), Gaps = 19/694 (2%)
Query: 1 MIKKTNQSDRRVLSFPAVHPCEAISPATLLNSLITLANGVCSNNSKFFATQRRNAREAIR 60
MI S RR+L+FPAV+PCE+IS TL++SL+ LA + S K F+T +R+ +E +R
Sbjct: 1 MIHTPTGSSRRILTFPAVNPCESISLTTLVDSLLQLAGEILSFKPKHFSTNKRSVKETLR 60
Query: 61 QIGILLIFFEEIRDR----GLNLSDLVVLCFSELHLTFQKVQFLMEDCTREGAKLWVLMK 116
+ L+IFFEE+R + + V+L SELH+ FQK++FL++DCTR+GAKL++LM
Sbjct: 61 HVQTLVIFFEELRIQIRVGSIPAGRSVILSLSELHVIFQKLKFLLDDCTRDGAKLYMLMN 120
Query: 117 SQFIATQFRVLIRAIATALDVFPLDTVDICGEVKELVDLVAKQARKAKFELDKEDERAMK 176
S ++ FR L R+I+T+LD FP+ +VD+ GEV EL+ LV +Q RK++ D++D+RA+
Sbjct: 121 SGQVSAHFRDLTRSISTSLDTFPVRSVDLPGEVNELIYLVMRQTRKSEARPDRDDKRAID 180
Query: 177 RVLSILNYFEKGIEPDSGFMTWVLDYLEIKSWSDCNSEIKFLEELVALECSDSEEREVPF 236
V N FE I P+S + VLD++ ++ W DC EI FL E +++ E+
Sbjct: 181 SVYWFFNLFENRINPNSDEILRVLDHIGVRKWRDCVKEIDFLREEISV--GKKSNIEIEL 238
Query: 237 LSSLVGFMSYCRVVIFETLDYRSSDQIDVRCNMETLSCLNPEDFRCPISLELMTDPVTVS 296
LS+L+GF+ YCR VI +D ++ ++ + LN +D RCPISLE+M+DPV +
Sbjct: 239 LSNLMGFICYCRCVILRGIDVDDEEKDKEEDDLMMVRSLNVDDLRCPISLEIMSDPVVLE 298
Query: 297 TGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLKKLIHQFCADNGISLAKSGRK 356
+G TYDRSSI KW +GN+ CPKTG+ L +T L+ N ++K++I + NG+ + + G+K
Sbjct: 299 SGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVIQSYSKQNGVVMGQKGKK 358
Query: 357 SRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIV 416
D+ ++ AA EA KL + FLA L G EE KA EIR+L K++ F RSC+V
Sbjct: 359 KVDVAESL-----AAEEAGKLTAEFLAGELIKGDEEEMVKALVEIRILTKTSTFYRSCLV 413
Query: 417 ESGAIPPLLNLLSSPDQCVQENAVAALLKLSKHTSGKKVIV--ESGGLKVILKVLKSGLS 474
E+G + L+ +L S D +QENA+A ++ LSK +GK IV + GGL++I++VL G
Sbjct: 414 EAGVVESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTRIVGEDGGGLRLIVEVLNDGAR 473
Query: 475 LEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIE--EGTDCGKKNAVVAIFGLLL 532
E+RQ AAA LFYL+S+ Y +LIGE AIP LV++++ + D K+NA++AI LL+
Sbjct: 474 RESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCDYGDSAKRNALIAIRSLLM 533
Query: 533 SQ-GNHQKVLDAGTVPLLADILASSNRTELIT-DSLAVLANLAEDIQGTSTILKTSALPV 590
+Q NH ++L AG VP+L D++ S ++ +T DS+A+LA +AE G ++L+ L +
Sbjct: 534 NQPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAILAKMAEYPDGMISVLRRGGLKL 593
Query: 591 IIGLL-QTLTSRAGKEYCVSILLSLCSNAREEVTASLAKDPSLMNSLYSLTTDGTSQARK 649
+ +L + S A K++CV++LL+LC N +V SLAK+PS+M SLY+ +++G K
Sbjct: 594 AVKILGSSEVSPATKQHCVALLLNLCHNGGSDVVGSLAKNPSIMGSLYTASSNGELGGGK 653
Query: 650 KARSLIKILHKFIETCSSGVEGSAVPHERPFHVW 683
KA +LIK++H+F E +G + ER H W
Sbjct: 654 KASALIKMIHEFQER-KTGPGEPVLERERFVHAW 686
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 516 bits (1328), Expect = e-145, Method: Compositional matrix adjust.
Identities = 288/700 (41%), Positives = 430/700 (61%), Gaps = 20/700 (2%)
Query: 1 MIKKTNQSDRRVLSFPAVHPCEAISPATLLNSLITLANGVCSNNSKFFATQRRNAREAIR 60
MI S RR+L+FP V P E+IS TLL+SLI LA + + SK F+T +++ RE +R
Sbjct: 1 MIHTKTGSGRRILTFPTVEPSESISIVTLLDSLIQLAGDILTFKSKHFSTNKQSFRETLR 60
Query: 61 QIGILLIFFEEIRDRGLNL-----SDLVVLCFSELHLTFQKVQFLMEDCTREGAKLWVLM 115
+I LL+ FEEIR R N E+H+ FQK++FL+EDCTR+GA+L ++M
Sbjct: 61 RIQNLLVVFEEIRIRIRNSRRYFHDSAAASSLKEIHVGFQKLKFLLEDCTRDGARLCMMM 120
Query: 116 KSQFIATQFRVLIRAIATALDVFPLDTVDICGEVKELVDLVAKQARKAKFELDKEDERAM 175
S ++ RVL R+I+T+L FP+ +VD+ EV EL+DLV +QARK + + D+RA+
Sbjct: 121 NSDQVSDHLRVLTRSISTSLSAFPVASVDLTTEVNELIDLVVRQARKYGVQPETNDKRAV 180
Query: 176 KRVLSILNYFEKGIEPDSGFMTWVLDYLEIKSWSDCNSEIKFLEELVALECSDSEER--- 232
+ IL F + PD + +LD++ I+ W DC EI FL E + E D +++
Sbjct: 181 SSINRILALFVNRVVPDPDEINRILDHVGIRKWGDCVKEINFLGEEIDAERLDEKKKKSS 240
Query: 233 -EVPFLSSLVGFMSYCRVVIF---ETLDYRSSDQIDVRCNMETLSCLNPEDFRCPISLEL 288
+V LSSL+GF+ YCR +I E D+ + + ++ + + + L ED CPISLE+
Sbjct: 241 DQVELLSSLMGFICYCRCIILGRIERDDHHNHHEDGIKKDHDLIRGLKVEDLLCPISLEI 300
Query: 289 MTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLKKLIHQFCADNGI 348
MTDPV + TG TYDRSSI KW +GN+ CP TG+ LT+TEL+ N +++++I + C NGI
Sbjct: 301 MTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRKHCKTNGI 360
Query: 349 SLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSN 408
LA R+ R ++P S AA A KL+++FL L G E +A EIR+ K++
Sbjct: 361 VLAGISRR-RKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIYRAVREIRVQTKTS 419
Query: 409 IFNRSCIVESGAIPPLLNLLSSPDQCVQENAVAALLKLSKHTSGKKVIVESGGLKVILKV 468
FNRSC+V++GA+ PLL LLSS D +QENA+A +L LSKH +GK I GLK+++++
Sbjct: 420 SFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSKHVTGKSKIAGE-GLKILVEI 478
Query: 469 LKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLI--EEGTDCGKKNAVVA 526
L G E R +A+ LFYL+SV+ Y +LIGE P AIP L+ ++ ++ D K++A++A
Sbjct: 479 LNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLA 538
Query: 527 IFGLLLSQGNHQKVLDAGTVPLLADILASSNRT-ELITDSLAVLANLAEDIQGTSTILKT 585
+ GLL+ NH +VL AG VP+L D+L S + L D LA LA LAE GT +++
Sbjct: 539 VMGLLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTADCLATLAKLAEYPDGTIGVIRR 598
Query: 586 SALPVIIGLLQTLTSR--AGKEYCVSILLSLCSNAREEVTASLAKDPSLMNSLYSLTTDG 643
L + + +L + A K++CV ++L+LC N +V L K+ +M SLY++ ++G
Sbjct: 599 GGLKLAVKILSSSEDSPVAVKQHCVGLILNLCLNGGRDVVGVLVKNSLVMGSLYTVLSNG 658
Query: 644 TSQARKKARSLIKILHKFIETCSSGVEGSAVPHERPFHVW 683
KKA +LI+++H+F E + VE + + R H W
Sbjct: 659 EYGGSKKASALIRMIHEFQERKTGSVEPN-LQRGRFVHAW 697
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 226/669 (33%), Positives = 364/669 (54%), Gaps = 40/669 (5%)
Query: 24 ISPATLLNSLITLANGVCS-NNSKFFATQRRNAREAIRQIGILLIFFEEIRDRGLNLSDL 82
+S L+ +L ++++ V S S F+ QR+NAR IR+I I ++ FE + D +
Sbjct: 27 LSGVALVQTLASISSEVVSCFTSVRFSFQRKNARSLIRKIEIFVVLFEFLVDSNWGSTTT 86
Query: 83 ----------------VVLCFSELHLTFQKVQFLMEDCTREGAKLWVLMKSQFIATQFRV 126
+LC EL+L + + L++ C + +KLW+L+++ I+ F
Sbjct: 87 RTRARRRSKSSVSESTALLCLKELYLLLYRSKILVDYCA-QSSKLWLLLQNPSISGYFHD 145
Query: 127 LIRAIATALDVFPLDTVDICGEVKELVDLVAKQARKAKFELDKEDERAMKRVLSILNYFE 186
L + I+T LDV P++ + + +++E ++L+ +Q+RKA+ +DK DE + S L+ FE
Sbjct: 146 LNQEISTLLDVLPVNDLGLSDDIREQIELLQRQSRKARLYIDKNDESLRESFYSFLDGFE 205
Query: 187 KGIEPDS-GFMTWVLDYLEIKSWSDCNSEIKFLEELVALECSDSEEREVPFLSSLVGFMS 245
G P S + ++ L I+ C SEI+FLEE + D E P S + GF++
Sbjct: 206 NGKIPSSVDLRMFFVEKLGIRDSKSCRSEIEFLEEQIVNHDGDLE----PTGSVINGFVA 261
Query: 246 ---YCRVVIF----ETLDY------RSSDQIDVRCNMETLSCLNPEDFRCPISLELMTDP 292
YCR ++F + +++ + + V + P+DF CPISL+LMTDP
Sbjct: 262 ITRYCRFLLFGFEEDGMEWWIENNPKKPRKGFVAQEIGDTFITVPKDFVCPISLDLMTDP 321
Query: 293 VTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLKKLIHQFCADNGISLAK 352
V +STGQTYDR+SI +W++ G+ CPKTG+ L ++ ++PN LK LI Q+C +GIS
Sbjct: 322 VIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRALKNLIVQWCTASGISYES 381
Query: 353 SGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNR 412
S + + + AA EA K L + L G+ + AA EIRLLAK+ NR
Sbjct: 382 EFTDSPNESFASALPTKAAVEANKATVSILIKYLADGSQAAQTVAAREIRLLAKTGKENR 441
Query: 413 SCIVESGAIPPLLNLLSSPDQCVQENAVAALLKLSKHTSGKKVIVESGG-LKVILKVLKS 471
+ I E+GAIP L LL+S + QEN+V A+L LS + K I+E G L+ I+ VL S
Sbjct: 442 AYIAEAGAIPHLCRLLTSENAIAQENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVS 501
Query: 472 GLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLL 531
GL++EA++ AAATLF L++V Y+K I + + AL L++ GT GKK+AV A++ L
Sbjct: 502 GLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLS 561
Query: 532 LSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLAEDIQGTSTILKTSALPVI 591
N ++++ G V L L N + A+ + + + + + SA+ +
Sbjct: 562 THPDNCSRMIEGGGVSSLVGAL--KNEGVAEEAAGALALLVRQSLGAEAIGKEDSAVAGL 619
Query: 592 IGLLQTLTSRAGKEYCVSILLSLCSNAREEVTASLAKDPSLMNSLYSLTTDGTSQARKKA 651
+G+++ T R GKE V+ LL LC + V + + P++ L +L GT +AR+KA
Sbjct: 620 MGMMRCGTPR-GKENAVAALLELCRSGGAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKA 678
Query: 652 RSLIKILHK 660
SL ++ +
Sbjct: 679 ASLARVFQR 687
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 7/173 (4%)
Query: 505 IPALVKLIEEGTDCGKKNAVVAIFGLLLSQG--NHQKVLDAGTVPLLADILASSNRTELI 562
+ L+K + +G+ + A I LL G N + +AG +P L +L S N
Sbjct: 408 VSILIKYLADGSQAAQTVAAREI-RLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQ- 465
Query: 563 TDSLAVLANLAEDIQGTSTILKTS-ALPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREE 621
+S+ + NL+ + S I++ L I+ +L + + +E + L SL +A E
Sbjct: 466 ENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSL--SAVHE 523
Query: 622 VTASLAKDPSLMNSLYSLTTDGTSQARKKARSLIKILHKFIETCSSGVEGSAV 674
+A + +L L +GT + +K A + + L + CS +EG V
Sbjct: 524 YKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGV 576
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 213/566 (37%), Positives = 322/566 (56%), Gaps = 25/566 (4%)
Query: 105 TREGAKLWVLMKSQFIATQFRVLIRAIATALDVFPLDTVDICGEVKELVDLVAKQARKAK 164
TR+G+K+ M+ +F + R I ALD P +T + EV+E V LV Q ++A
Sbjct: 66 TRDGSKIDQAMRGDAFLDEFAGVNRQIHLALDALPYNTFHMPQEVQEQVALVHSQFQRAS 125
Query: 165 FELDKEDERAMKRVLSI-LNYFEKGIEPDSGFMTWVLDYLEIKSWSDCNSEIKFLEELVA 223
D D + LS+ L + D +T + L++ + +D +E L +V
Sbjct: 126 TRTDPPDTQ-----LSMDLAWALTDNPSDPALLTRISHKLQLHTMADMKNESIALHNMV- 179
Query: 224 LECSDSEEREVPFLSSLVGFMSYCRVVIFETLDYRSSDQIDVR-CNMETLSCLNPEDFRC 282
+ + + V +SSL+ + C V T D+ ++D + R +++ S + P++FRC
Sbjct: 180 ISTAGEPDGCVDQMSSLLKKLKDCVV----TEDH-ANDALTTRSASIKHRSPIIPDEFRC 234
Query: 283 PISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLKKLIHQF 342
PISLELM DPV VS+GQTY+RS IQKWL +G+ CPKT + L++T L PN LK LI Q+
Sbjct: 235 PISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVLKSLISQW 294
Query: 343 CADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIR 402
C NGI L K+ + SRD + + L+S L RL G +E+ AA EIR
Sbjct: 295 CEANGIELPKNKQNSRDKKA----AKSSDYDHAGLVS--LMNRLRSGNQDEQRAAAGEIR 348
Query: 403 LLAKSNIFNRSCIVESGAIPPLLNLLSSPDQCVQENAVAALLKLSKHTSGKKVIVESGGL 462
LLAK N+ NR CI E+GAIP L+NLLSS D QE+AV ALL LS H + K IV+S +
Sbjct: 349 LLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASIVDSHAI 408
Query: 463 KVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKN 522
I++VLK+G S+E R+ AAATLF L+ V + IG AIP L+ L+ +G+ GKK+
Sbjct: 409 PKIVEVLKTG-SMETRENAAATLFSLSVVDENKVTIGAA-GAIPPLINLLCDGSPRGKKD 466
Query: 523 AVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLAEDIQGTSTI 582
A AIF L + QGN + + AG V L + L +I ++L++L+ LA + +G I
Sbjct: 467 AATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPT-GGMIDEALSLLSILAGNPEGKIVI 525
Query: 583 LKTSALPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREEVTASLAKDPSLMNSLYSLTTD 642
++ +P ++ +++T + R +E +IL LCS E+ A AK + ++L L+
Sbjct: 526 ARSEPIPPLVEVIKTGSPR-NRENAAAILWLLCSADTEQTLA--AKAAGVEDALKELSET 582
Query: 643 GTSQARKKARSLIKILHKFIETCSSG 668
GT +A++KA S+++++H+ E G
Sbjct: 583 GTDRAKRKASSILELMHQANEDSLKG 608
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 306 bits (785), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 215/648 (33%), Positives = 349/648 (53%), Gaps = 32/648 (4%)
Query: 27 ATLLNSLITLANGVCSNNSKFFATQRRNAREAIRQIGILLIFFEEIRDRGLNLSDLVVLC 86
A+ SLI + N + + S + T ++ R++ +L+ FEEIR+ +S+ +
Sbjct: 6 ASAAQSLIDVVNEIAAI-SDYRITVKKLCYNLARRLKLLVPMFEEIRESNEPISEDTLKT 64
Query: 87 FSELHLTFQKVQFLMEDCTREGAKLWVLMKSQFIATQFRVLIRAIATALDVFPLDTVDIC 146
L + ++ C+ +G+K++++M+ + + ++ + + +L P + +DI
Sbjct: 65 LMNLKEAMCSAKDYLKFCS-QGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEELDIS 123
Query: 147 GEVKELVDLVAKQARKAKFELDKEDERAMKRVLSILNYFEKGIEPDSGFMTWVLDYLEIK 206
EV+E V+LV Q R+AK +D D+ + + S+ N ++ + V L +
Sbjct: 124 DEVREQVELVLSQFRRAKGRVDVSDDELYEDLQSLCNK-SSDVDAYQPVLERVAKKLHLM 182
Query: 207 SWSDCNSEIKFLEELVALECSDSEEREVPFLSSLVGFMSYCRVVIFETLDYRSSDQ---I 263
D E L E+VA D E + + + + + +T D +Q +
Sbjct: 183 EIPDLAQESVALHEMVASSGGDVGEN----IEEMAMVLKMIKDFV-QTEDDNGEEQKVGV 237
Query: 264 DVRCNMETLSCLN------PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLC 317
+ R N +T + + P+DFRCPISLE+M DPV VS+GQTY+R+ I+KW++ G+ C
Sbjct: 238 NSRSNGQTSTAASQKIPVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTC 297
Query: 318 PKTGEKLTNTELLPNTTLKKLIHQFCADNGISLAK--SGRKSRDITRTIIPGSPAAAEAM 375
PKT + LT+T L PN L+ LI Q+C N I K S + R ++ P AEA
Sbjct: 298 PKTQQALTSTTLTPNYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSP-----AEAN 352
Query: 376 KLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLSSPDQCV 435
K+ L RL +G E++ AA EIRLLAK N NR I E+GAIP L+ LLS+PD +
Sbjct: 353 KIED--LMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRI 410
Query: 436 QENAVAALLKLSKHTSGKKVIVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYR 495
QE++V ALL LS + K IV +G + I++VLK G S+EAR+ AAATLF L+ + +
Sbjct: 411 QEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKG-SMEARENAAATLFSLSVIDENK 469
Query: 496 KLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILAS 555
IG AIP LV L+ EGT GKK+A A+F L + QGN K + AG +P L +L
Sbjct: 470 VTIGAL-GAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTE 528
Query: 556 SNRTELITDSLAVLANLAEDIQGTSTILKTSALPVIIGLLQTLTSRAGKEYCVSILLSLC 615
+ ++ ++LA+LA L+ +G + I + A+P ++ ++T + R +E ++L+ LC
Sbjct: 529 PG-SGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPR-NRENAAAVLVHLC 586
Query: 616 SNAREEVTASLAKDPSLMNSLYSLTTDGTSQARKKARSLIKILHKFIE 663
S + + A+ LM L L +GT + ++KA L++ + + E
Sbjct: 587 SGDPQHLVE--AQKLGLMGPLIDLAGNGTDRGKRKAAQLLERISRLAE 632
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 306 bits (784), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 216/657 (32%), Positives = 344/657 (52%), Gaps = 31/657 (4%)
Query: 23 AISPATLLNSLITLANGVCSNNSKFFATQRRNAREAIRQIGILLIFFEEI---RDRGLNL 79
++ ATLL ++ +LA + + +QRRN R++ +L E I
Sbjct: 36 GLAGATLLRAVASLAASLVAGARP--PSQRRNVDALARRLALLSAILESILLDTAAAGAF 93
Query: 80 SDLVVLCFSELHLTFQKVQFLMEDCTREGAKLWVLMKSQFIATQFRVLIRAIATALDVFP 139
SD LCF EL++ + + L+ G + W L++S +A FR L +A LDV P
Sbjct: 94 SDAANLCFRELYVVLFRAELLVSYVASAG-RAWALLRSPHLAASFRDLDAELAVVLDVLP 152
Query: 140 LDTVDICGEVKELVDLVAKQAR-KAKFELDKEDERAMK-RVLSILNYFEKGIEPDSGFMT 197
++ + + L+DL+ R +A + DE A++ R++ L F+ G PD +
Sbjct: 153 AASLRLSHDATGLLDLLRAHCRCRAPAQYHDPDEAALRERLMDALRQFDLGQPPDHPSLQ 212
Query: 198 WVLDYLEIKSWSDCNSEIKFLEELVALECSDSEEREVPFLSSLVGFMSYCRVVIFETLDY 257
+L + I + + C +EI +LEE + S E+ ++P + S++ + YC +F+ +
Sbjct: 213 SLLADMGISTAASCRAEIDYLEEQI---LSQEEDTDLPLVGSVLALLRYCLFAVFDPSNA 269
Query: 258 RSSDQIDVRCNMETLSCLN---------PEDFRCPISLELMTDPVTVSTGQTYDRSSIQK 308
++ + N + L + P++F CPISL+LM DPV STGQTYDR SI +
Sbjct: 270 KALRDWPLSGNRQRLLSIGGGDDTSFSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQ 329
Query: 309 WLKAGNMLCPKTGEKLTNTELLPNTTLKKLIHQFCADNGISLAKSGRKSRDITRTIIP-- 366
W++ G+ CP +G+ L + L+PN L+ LI Q+C G+ S + + +
Sbjct: 330 WIEEGHSTCPNSGQTLADHRLVPNRALRSLISQWCGVYGLQY-DSPESNEGMAECVAASC 388
Query: 367 GSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIVESGAIPPLLN 426
S AA EA K +R L R L G+ K AA EIRLLAK+ NR+ I + GAIP L
Sbjct: 389 SSRAAMEANKATARILVRMLEDGSENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCR 448
Query: 427 LLSSPDQCVQENAVAALLKLSKHTSGKKVIVESGG-LKVILKVLKSGLSLEARQIAAATL 485
LL S D QENAV ALL LS K I+E G L++I+ VL++G + EA++ AAATL
Sbjct: 449 LLLSNDWMAQENAVTALLNLSIFEPNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATL 508
Query: 486 FYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVLDAGT 545
F L+ V ++KLI P A+ L ++ +GT GKK+AV+A+F L + ++L++
Sbjct: 509 FSLSVVHNFKKLIMNEPGAVEELASMLTKGTSRGKKDAVMALFNLSTHPESSARMLESCA 568
Query: 546 VPLLADILASSNRTELITDSLAVLANLAEDIQ--GTSTILKTSALPVIIGLLQTLTSRAG 603
V L L + +E +LA+L + G+S + TS ++GL++ T + G
Sbjct: 569 VVALIQSLRNDTVSEEAAGALALLMKQPSIVHLVGSSETVITS----LVGLMRRGTPK-G 623
Query: 604 KEYCVSILLSLCSNAREEVTASLAKDPSLMNSLYSLTTDGTSQARKKARSLIKILHK 660
KE VS L +C + +AK P L + ++T +GT +A+KKA ++K+ +
Sbjct: 624 KENAVSALYEICRRGGSALVQRVAKIPGLNTVIQTITLNGTKRAKKKASLIVKMCQR 680
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 298 bits (764), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 219/620 (35%), Positives = 334/620 (53%), Gaps = 31/620 (5%)
Query: 59 IRQIGILLIFFEEIRDRGLNLSDLVVLCFSELHLTFQKVQFLMEDCTREGAKLWVLMKSQ 118
+R+I +L FFEE+ D + L + F + + L G+KL+ L
Sbjct: 41 VRRITLLSPFFEELIDVNVELKKDQITGFEAMRIALDSSLELFRSVNG-GSKLFQLFDRD 99
Query: 119 FIATQFRVLIRAIATALDVFPLDTVDICGEVKELVDLVAKQARKAKFELDKEDERAMKRV 178
+ +FR + I AL P + +++ EV+E V L+ Q ++AK ++ D ++
Sbjct: 100 SLVEKFRDMTVEIEAALSQIPYEKIEVSEEVREQVQLLHFQFKRAKERWEESD----LQL 155
Query: 179 LSILNYFEKGIEPDSGFMTWVLDYLEIKSWSDCNSEIKFLEELVALECSDSE---EREVP 235
L E ++PD + + L++ + + E + E D + ER
Sbjct: 156 SHDLAMAENVMDPDPIILKRLSQELQLTTIDELKKESHAIHEYFLSYDGDPDDCFERMSS 215
Query: 236 FLSSLVGFMSYCRVVIFETLDYRSSDQIDVRCNMETLSCLNPEDFRCPISLELMTDPVTV 295
L +LV F V E+ D S R S + PE FRCPISLELM DPV V
Sbjct: 216 LLKNLVDF------VTMESSDPDPS--TGSRIVSRHRSPVIPEYFRCPISLELMKDPVIV 267
Query: 296 STGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLKKLIHQFCADNGISLAKSGR 355
STGQTY+RSSIQKWL AG+ CPK+ E L + L PN LK LI +C NGI L
Sbjct: 268 STGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCESNGIELP---- 323
Query: 356 KSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCI 415
+++ RT G ++++ + L +L GT E++ AA E+RLLAK N+ NR CI
Sbjct: 324 QNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCI 383
Query: 416 VESGAIPPLLNLLSSPDQCVQENAVAALLKLSKHTSGKKVIVESGGLKVILKVLKSGLSL 475
E+GAIP L+ LLSSPD QE++V ALL LS + K IV++G + I++VLK+G S+
Sbjct: 384 AEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKNG-SM 442
Query: 476 EARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQG 535
EAR+ AAATLF L SV K+ AI AL+ L+EEGT GKK+A AIF L + QG
Sbjct: 443 EARENAAATLFSL-SVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQG 501
Query: 536 NHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLAEDIQGTSTILKTSALPVIIGLL 595
N + + G V L +L + ++ ++LA+LA L+ + +G + I + ++PV++ ++
Sbjct: 502 NKSRAVKGGIVDPLTRLLKDAGGG-MVDEALAILAILSTNQEGKTAIAEAESIPVLVEII 560
Query: 596 QTLTSRAGKEYCVSILLSLCSNAREEVTASLAKDPSLMNSLYSLTTDGTSQARKKARSLI 655
+T + R +E +IL LC E + ++A++ +L LT +GT +A++KA SL+
Sbjct: 561 RTGSPR-NRENAAAILWYLCIGNIERL--NVAREVGADVALKELTENGTDRAKRKAASLL 617
Query: 656 KILHKFIETCSSGVEGSAVP 675
+++ + + GV + VP
Sbjct: 618 ELIQQ-----TEGVAVTTVP 632
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 192/619 (31%), Positives = 322/619 (52%), Gaps = 36/619 (5%)
Query: 52 RRNAREAIRQIGILLIFFEEI---RDRGLNLSDLVVLCFSELHLTFQKVQFLMEDCTREG 108
RRN+ IR++ IL F+E+ R + + S LCF E+ + Q+++ L++DC+R
Sbjct: 55 RRNSLSLIRKVKILASVFDELLLPRSQLVVYSQSAHLCFEEMQIVMQRIKSLIDDCSRV- 113
Query: 109 AKLWVLMKSQFIATQFRVLIRAIATALDVFPLDTVDICGEVKELVDLVAKQARKAKFELD 168
+KLW+L++ +A F L+ ++T LD+ PL D+ + ++L+ L+ KQ + +D
Sbjct: 114 SKLWLLLQIDIVAFNFHELVTDLSTVLDILPLHDFDLSDDAQDLISLLTKQCSDSVQFVD 173
Query: 169 KEDERAMKRVLSILNYFEKGIEPDSGFMTWVLDYLEIKSWSDCNSEIKFLEELVALECSD 228
D ++V + + I PD + + + L + + EI+ LE+ + + D
Sbjct: 174 ARDVALRRKVTDTIAGIKHQISPDHSTLIKIFNDLGLSDSASLTDEIQRLEDEIQDQIDD 233
Query: 229 SEEREVPFLSSLVGFMSYCRVVIFETLDYRSSDQIDVRCNMETLSCLN-PEDFRCPISLE 287
R +SL+G + Y + V++ S+ D R ++LS N P DFRCPI+LE
Sbjct: 234 ---RSKSAAASLIGLVRYSKCVLYGP----STPAPDFR-RHQSLSDANIPADFRCPITLE 285
Query: 288 LMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLKKLIHQFCADNG 347
LM DPV V+TGQTYDR SI W+++G+ CPKTG+ L +T L+PN LK LI +C D
Sbjct: 286 LMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRALKNLIVLWCRDQK 345
Query: 348 ISLAKSGRKSRDITRTIIPGSPA----AAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRL 403
I G G PA A E K+M FL +L + N +E+R
Sbjct: 346 IPFELYGDGG---------GEPAPCKEAVEFTKMMVSFLIEKLSVA---DSNGVVFELRA 393
Query: 404 LAKSNIFNRSCIVESGAIPPLLNLLSSPDQCVQENAVAALLKLSKHTSGKKVIVES-GGL 462
LAKS+ R+CI E+GAIP L+ L++ +Q NAV +L LS K I+E+ G L
Sbjct: 394 LAKSDTVARACIAEAGAIPKLVRYLATECPSLQINAVTTILNLSILEQNKTRIMETDGAL 453
Query: 463 KVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKN 522
+++VL+SG + EA+ AAATLF L V YR+ +G + + LV L ++G K++
Sbjct: 454 NGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSKRD 513
Query: 523 AVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLAEDIQGTSTI 582
A+VAI L+ + N + ++AG + A+ + + + + + G +
Sbjct: 514 ALVAILNLVAERENVGRFVEAGVMG------AAGDAFQELPEEAVAVVEAVVRRGGLMAV 567
Query: 583 LKTSALPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREEVTASLAKDPSLMNSLYSLTTD 642
+L ++G + + +E + L+++C E+ A +A P + ++ +
Sbjct: 568 SAAFSLIRLLGEVMREGADTTRESAAATLVTMCRKGGSELVAEMAAIPGIERVIWEMIGA 627
Query: 643 GTSQARKKARSLIKILHKF 661
GT++ +KA SL++ L ++
Sbjct: 628 GTARGGRKAASLMRYLRRW 646
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 291 bits (744), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 313/563 (55%), Gaps = 25/563 (4%)
Query: 106 REGAKLWVLMKSQFIATQFRVLIRAIATALDVFPLDTVDICGEVKELVDLVAKQARKAKF 165
REG+++ ++++ + +F+ +I + AL P + +DI EV+E V+LV Q ++AK
Sbjct: 105 REGSRISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKE 164
Query: 166 ELDKEDERAMKRVLSILNYFEKGIEPDS--GFMTWVLDYLEIKSWSDCNSEIKFLEELVA 223
+D D+ +LS+ ++K +P + + + + L + + +D E L E+VA
Sbjct: 165 RIDMPDDEFYNDLLSV---YDKNYDPSAELAILGRLSEKLHLMTITDLTQESLALHEMVA 221
Query: 224 ----LECSDSEEREVPFLSSLVGFMSYCRVVIFETLDYRSSDQIDVRCNMETLSCLNPED 279
+ + ER L + F+ + + R D N ++ P++
Sbjct: 222 SGGGQDPGEHIERMSMLLKKIKDFVQTQNPDMGPPMASRVLD-----SNGDSRPITIPDE 276
Query: 280 FRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLKKLI 339
FRCPISLELM DPV VSTGQTY+R+ I+KW+ +G+ CP T +K++ + L PN L+ LI
Sbjct: 277 FRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLI 336
Query: 340 HQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAY 399
Q+C NG+ K + T PA + + + L +L EE+ AA
Sbjct: 337 SQWCETNGMEPPKRSTQPNKPT-------PACSSSERANIDALLSKLCSPDTEEQRSAAA 389
Query: 400 EIRLLAKSNIFNRSCIVESGAIPPLLNLLSSPDQCVQENAVAALLKLSKHTSGKKVIVES 459
E+RLLAK N NR CI E+GAIP LL+LLSS D QE+AV ALL LS H K I+ S
Sbjct: 390 ELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISS 449
Query: 460 GGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCG 519
G + I+ VLK+G S+EAR+ AAATLF L+ + Y+ IG AIPALV L+ EG+ G
Sbjct: 450 GAVPSIVHVLKNG-SMEARENAAATLFSLSVIDEYKVTIGGM-GAIPALVVLLGEGSQRG 507
Query: 520 KKNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLAEDIQGT 579
KK+A A+F L + QGN + + AG VPL+ ++ + L+ +++A+L+ L+ +G
Sbjct: 508 KKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGA-LMDEAMAILSILSSHPEGK 566
Query: 580 STILKTSALPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREEVTASLAKDPSLMNSLYSL 639
+ I +PV++ ++ + T R +E +++L LCS V + A++ +M L L
Sbjct: 567 AAIGAAEPVPVLVEMIGSGTPR-NRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLREL 625
Query: 640 TTDGTSQARKKARSLIKILHKFI 662
+GT + ++KA L++ + +F+
Sbjct: 626 ALNGTDRGKRKAVQLLERMSRFL 648
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 291 bits (744), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 313/563 (55%), Gaps = 25/563 (4%)
Query: 106 REGAKLWVLMKSQFIATQFRVLIRAIATALDVFPLDTVDICGEVKELVDLVAKQARKAKF 165
REG+++ ++++ + +F+ +I + AL P + +DI EV+E V+LV Q ++AK
Sbjct: 105 REGSRISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKE 164
Query: 166 ELDKEDERAMKRVLSILNYFEKGIEPDS--GFMTWVLDYLEIKSWSDCNSEIKFLEELVA 223
+D D+ +LS+ ++K +P + + + + L + + +D E L E+VA
Sbjct: 165 RIDMPDDEFYNDLLSV---YDKNYDPSAELAILGRLSEKLHLMTITDLTQESLALHEMVA 221
Query: 224 ----LECSDSEEREVPFLSSLVGFMSYCRVVIFETLDYRSSDQIDVRCNMETLSCLNPED 279
+ + ER L + F+ + + R D N ++ P++
Sbjct: 222 SGGGQDPGEHIERMSMLLKKIKDFVQTQNPDMGPPMASRVLD-----SNGDSRPITIPDE 276
Query: 280 FRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLKKLI 339
FRCPISLELM DPV VSTGQTY+R+ I+KW+ +G+ CP T +K++ + L PN L+ LI
Sbjct: 277 FRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLI 336
Query: 340 HQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAY 399
Q+C NG+ K + T PA + + + L +L EE+ AA
Sbjct: 337 SQWCETNGMEPPKRSTQPNKPT-------PACSSSERANIDALLSKLCSPDTEEQRSAAA 389
Query: 400 EIRLLAKSNIFNRSCIVESGAIPPLLNLLSSPDQCVQENAVAALLKLSKHTSGKKVIVES 459
E+RLLAK N NR CI E+GAIP LL+LLSS D QE+AV ALL LS H K I+ S
Sbjct: 390 ELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISS 449
Query: 460 GGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCG 519
G + I+ VLK+G S+EAR+ AAATLF L+ + Y+ IG AIPALV L+ EG+ G
Sbjct: 450 GAVPSIVHVLKNG-SMEARENAAATLFSLSVIDEYKVTIGGM-GAIPALVVLLGEGSQRG 507
Query: 520 KKNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLAEDIQGT 579
KK+A A+F L + QGN + + AG VPL+ ++ + L+ +++A+L+ L+ +G
Sbjct: 508 KKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGA-LMDEAMAILSILSSHPEGK 566
Query: 580 STILKTSALPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREEVTASLAKDPSLMNSLYSL 639
+ I +PV++ ++ + T R +E +++L LCS V + A++ +M L L
Sbjct: 567 AAIGAAEPVPVLVEMIGSGTPR-NRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLREL 625
Query: 640 TTDGTSQARKKARSLIKILHKFI 662
+GT + ++KA L++ + +F+
Sbjct: 626 ALNGTDRGKRKAVQLLERMSRFL 648
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 273 bits (697), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 219/659 (33%), Positives = 337/659 (51%), Gaps = 77/659 (11%)
Query: 24 ISPATLLNSLITLANGVCSNNSKFFATQRRNAREAIRQIGILLIFFEEIRD--------- 74
+SPA+LL+ LI + N F +++ + R++ +L EEIRD
Sbjct: 6 VSPASLLD-LIADIVEIPLNTGMF----KKDCADLTRRVCLLTHLLEEIRDSTPIDSAAS 60
Query: 75 ---RGLNLSDLVVLCFSELHLTFQKVQFLMEDCTREGAKLWVLMKSQFIATQFRVLIRAI 131
SDLVV + L +F D + AK I+ QF+ + +
Sbjct: 61 SSSENDWWSDLVVGLQAAKRL-LSTARFQARDSSDGAAK--------RISFQFQCVTWKL 111
Query: 132 ATALDVFPLDTVDICGEVKELVDLVAKQARKAKFELDKEDERAMKRVLSI-LNYFEKGI- 189
AL P D DI EV E V+L Q R RAM+R S+ N F +
Sbjct: 112 EKALSNLPYDLYDISDEVGEQVELARSQLR-----------RAMQRYGSLNSNKFSSALS 160
Query: 190 EP--DSGFMTWVLDYLEIKSWSDCNSEIKFLEELVALECSDSEEREVPFLSSLVGFMSYC 247
EP GF + ++IK+ E K L + EE++ +S
Sbjct: 161 EPMERDGFS----NVIKIKA------EEKLESVSETLHFGEEEEKQSSPPLRRSSSISLA 210
Query: 248 RVVIFETLDYRSSDQIDVRCNMETLSCLN------PEDFRCPISLELMTDPVTVSTGQTY 301
+ + +D++D N T P DF CP+SLELM DPV V+TGQTY
Sbjct: 211 YYLSKDA----DTDRLDKMVNKNTDESKKSDKLTIPVDFLCPVSLELMKDPVIVATGQTY 266
Query: 302 DRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLKKLIHQFCADNGISLAKSGRKSRDIT 361
+R+ IQ+W+ GN+ CPKT +KL N L PN L+ LI ++CA++ I
Sbjct: 267 ERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVLRSLISRWCAEHNIEQPAG-------- 318
Query: 362 RTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIVESGAI 421
I G + M ++ R L +RL + E++ A EIR L+K + NR I E+GAI
Sbjct: 319 --YINGRTKNSGDMSVI-RALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAI 375
Query: 422 PPLLNLLSSPDQCVQENAVAALLKLSKHTSGKKVIVESGGLKVILKVLKSGLSLEARQIA 481
P L+NLL+S D QENA+ +L LS + + K++I+ +G + I++VL++G ++EAR+ A
Sbjct: 376 PVLVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAG-TMEARENA 434
Query: 482 AATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVL 541
AATLF L+ + +IG + AIPALV L+E GT GKK+A A+F L + GN + +
Sbjct: 435 AATLFSLSLADENKIIIGGS-GAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAV 493
Query: 542 DAGTVPLLADILASSNRTELITDSLAVLANLAEDIQGTSTILKTSALPVIIGLLQTLTSR 601
AG V L +L+ S R ++ ++L +L+ LA + S I+K + LP +IG+LQT +R
Sbjct: 494 RAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIGILQTDQTR 553
Query: 602 AGKEYCVSILLSLCSNAREEVTASLAKDPSLMNSLYSLTTDGTSQARKKARSLIKILHK 660
+E +ILLSLC E++ ++ + +++ L L+ +GT + ++KA SL+++L K
Sbjct: 554 -NRENAAAILLSLCKRDTEKLI-TIGRLGAVV-PLMDLSKNGTERGKRKAISLLELLRK 609
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 266 bits (679), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 205/603 (33%), Positives = 323/603 (53%), Gaps = 23/603 (3%)
Query: 68 FFEEIRDRGLNLSDLVVLCFSELHLTFQKVQFLMEDCTREGAKLWVLMKSQFIATQFRVL 127
EEIRD + S++V S L +K++++++ + +F+ +
Sbjct: 47 MLEEIRDNQESSSEVVNALLSVKQSLLHAKDLL--SFVSHVSKIYLVLERDQVMVKFQKV 104
Query: 128 IRAIATALDVFPLDTVDICGEVKELVDLVAKQARKA--KFELDKEDERAMKRVLSILNYF 185
+ AL + P + ++I E+KE V+LV Q R++ K D D+ K VLS+ Y
Sbjct: 105 TSLLEQALSIIPYENLEISDELKEQVELVLVQLRRSLGKRGGDVYDDELYKDVLSL--YS 162
Query: 186 EKGIEPDSGFMTWVLDYLEIKSWSDCNSEIKFLEELVALECSD----SEEREVPFLSSLV 241
+G +S + V + L++ + +D E L ++V+ D S E+ L +
Sbjct: 163 GRGSVMESDMVRRVAEKLQLMTITDLTQESLALLDMVSSSGGDDPGESFEKMSMVLKKIK 222
Query: 242 GFM-SYCRVVIFETLDYRSSDQIDVRCNMETLSCLNPEDFRCPISLELMTDPVTVSTGQT 300
F+ +Y + L +SS + + L + PE+FRCPISLELMTDPV VS+GQT
Sbjct: 223 DFVQTYNPNLDDAPLRLKSSLPKSRDDDRDML--IPPEEFRCPISLELMTDPVIVSSGQT 280
Query: 301 YDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLKKLIHQFCADNGISLAKSGRKSRDI 360
Y+R I+KWL+ G++ CPKT E LT+ + PN L+ LI Q+C NGI K S+
Sbjct: 281 YERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLRSLIAQWCESNGIEPPKRPNISQPS 340
Query: 361 TRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIVESGA 420
++ S E K+ L +L E++ AA EIRLLAK N NR I SGA
Sbjct: 341 SKASSSSSAPDDEHNKIEELLL--KLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGA 398
Query: 421 IPPLLNLLS-SPDQCVQENAVAALLKLSKHTSGK-KVIVESGGLKVILKVLKSGLSLEAR 478
IP L+NLL+ S D QE+AV ++L LS K K++ SG + I+ VL+ G S+EAR
Sbjct: 399 IPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQKG-SMEAR 457
Query: 479 QIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQ 538
+ AAATLF L+ + + IG AIP LV L+ EG+ GKK+A A+F L + QGN
Sbjct: 458 ENAAATLFSLSVIDENKVTIG-AAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKG 516
Query: 539 KVLDAGTVPLLADILASSNRTELITDSLAVLANLAEDIQGTSTILKTSALPVIIGLLQTL 598
K + AG VP+L +L + + ++ +SL++LA L+ G S + A+PV++ +++
Sbjct: 517 KAVRAGLVPVLMRLL-TEPESGMVDESLSILAILSSHPDGKSEVGAADAVPVLVDFIRSG 575
Query: 599 TSRAGKEYCVSILLSLCSNAREEVTASLAKDPSLMNSLYSLTTDGTSQARKKARSLIKIL 658
+ R KE ++L+ LCS ++ + A+ +M+ L + +GT + ++KA L+
Sbjct: 576 SPR-NKENSAAVLVHLCSWNQQHLIE--AQKLGIMDLLIEMAENGTDRGKRKAAQLLNRF 632
Query: 659 HKF 661
+F
Sbjct: 633 SRF 635
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 256 bits (653), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 223/673 (33%), Positives = 341/673 (50%), Gaps = 92/673 (13%)
Query: 23 AISPATLLNSLITLANGVCSNNSKFFATQRRNAREAIRQIGILLIFFEEIRDRG------ 76
AI+P +L+ LI N + N F +++ + R++G+L EEIRD
Sbjct: 5 AITPDSLIG-LIAEINEIPGN----FGLFKKDCSDLARRVGLLTHLIEEIRDSSPPSESD 59
Query: 77 --LNLSDLVVLCFSELHLTFQKVQFLMEDCTREGAKLWVLMKSQFIATQFRVLIRAIATA 134
+L+ +S+L + Q + L+ T A+ ++ I+ QF+ + + A
Sbjct: 60 ASSSLNSHECDWWSDLVVGLQAAKRLLSSATSFQARESSDGAAKRISFQFQCVTWKLEKA 119
Query: 135 LDVFPLDTVDICGEVKELVDLVAKQARKAKFELDKEDERAMKRVLSILNY-FEKGI---- 189
L D DI EV+E V+L Q R RAM+R S+ + F G+
Sbjct: 120 LGDLTYDRYDISDEVREQVELARLQLR-----------RAMQRYGSLNSKKFSSGLSEPM 168
Query: 190 EPDSGFMTWVLDYLE-----IKSWSDCNSEIKFLEELVALECSDSEEREVPFLSSLVGFM 244
E D+ V++ LE + S SD E KF E P+ SS V
Sbjct: 169 EKDASSNRKVIEKLESIPETVHSLSD---EKKF-------------ESPPPWKSSSVSLA 212
Query: 245 SYC----------RVVIFETLDYRSSDQIDVRCNMETLSCLNPEDFRCPISLELMTDPVT 294
+ + V + D + SD + + PEDF CPISLELM DP
Sbjct: 213 FFLSKDGDDERLEKAVTENSDDSQKSDNLTI-----------PEDFLCPISLELMKDPAI 261
Query: 295 VSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLKKLIHQFCADNGISLAK-- 352
VSTGQTY+RS IQ+W+ GN+ CPKT +KL N L PN L+ LI Q+C + I
Sbjct: 262 VSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLRSLISQWCTKHNIEQPGGY 321
Query: 353 -SGR-KSRDITRTIIPGSPAAAEAM--KLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSN 408
+GR K+ D + + G +A A+ KL S+ + E++ A EIR L+K +
Sbjct: 322 MNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSI---------EDRRTAVSEIRSLSKRS 372
Query: 409 IFNRSCIVESGAIPPLLNLLSSP-DQCVQENAVAALLKLSKHTSGKKVIVESGGLKVILK 467
NR I E+GAIP L+ LL+S D QENAV +L LS + K++I+ +G + I+
Sbjct: 373 TDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVL 432
Query: 468 VLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAI 527
VL++G S+EAR+ AAATLF L+ + +IG + AI ALV L++ G+ GKK+A A+
Sbjct: 433 VLRAG-SMEARENAAATLFSLSLADENKIIIGAS-GAIMALVDLLQYGSVRGKKDAATAL 490
Query: 528 FGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLAEDIQGTSTILKTSA 587
F L + QGN + + AG V L +L S+ + ++L +L+ LA + + IL+ +A
Sbjct: 491 FNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILRANA 550
Query: 588 LPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREEVTASLAKDPSLMNSLYSLTTDGTSQA 647
+P +I LQ R +E +ILL LC E++ S+ + +++ L L+ DGT +A
Sbjct: 551 IPPLIDCLQKDQPR-NRENAAAILLCLCKRDTEKLI-SIGRLGAVV-PLMELSRDGTERA 607
Query: 648 RKKARSLIKILHK 660
++KA SL+++L K
Sbjct: 608 KRKANSLLELLRK 620
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 241 bits (615), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 193/617 (31%), Positives = 321/617 (52%), Gaps = 33/617 (5%)
Query: 47 FFATQRRNAREAIRQIGILLIFFEEIRDRGLNLSDLVVLCFSELHLTFQKVQFLMEDCTR 106
+ TQ++ +R++ IL+ F +EIR G S + L F + L+E C+
Sbjct: 70 YRRTQQKECFNLVRRLKILIPFLDEIR--GFE-SPSCKHFLNRLRKVFLAAKKLLETCSN 126
Query: 107 EGAKLWVLMKSQFIATQFRVLIRAIATALDVFPLDTVDICGEVKELVDLVAKQARKAKFE 166
G+K+++ + + + T+F + + L P D + I G+ K+ +D + KQ +KAK
Sbjct: 127 -GSKIYMALDGETMMTRFHSIYEKLNRVLVKAPFDELMISGDAKDEIDSLCKQLKKAKRR 185
Query: 167 LDKEDERAMKRVLSILNYFEKGIEP---DSGFMTWVLDYLEIKSWSDCNSEIKFLEELVA 223
D +D ++ + ++ F K +P DS + + LE+++ D +E ++ L+
Sbjct: 186 TDTQD---IELAVDMMVVFSK-TDPRNADSAIIERLAKKLELQTIDDLKTETIAIQSLIQ 241
Query: 224 LECSDSEEREVPFLSSLVGFMSYCRVVIFETLDYRSSDQIDVRCNMETLSCLNPEDFRCP 283
+ + E + + L F ++ E D I+ + ++ S + P +F CP
Sbjct: 242 DKGGLNIETKQHIIELLNKFK---KLQGLEATDILYQPVIN-KAITKSTSLILPHEFLCP 297
Query: 284 ISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLKKLIHQFC 343
I+LE+M DPV ++TGQTY++ SIQKW AG+ CPKT ++L + L PN LK LI Q+C
Sbjct: 298 ITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIMQWC 357
Query: 344 ADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRL 403
N + + SP + K L L EE+ ++ ++RL
Sbjct: 358 EKNNFKIPEK------------EVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRL 405
Query: 404 LAKSNIFNRSCIVESGAIPPLLNLLSSPDQCVQENAVAALLKLSKHTSGKKVIVESGGLK 463
LA+ N NR I +GAIP L+ LLS PD +QENAV LL LS KK+I G +
Sbjct: 406 LARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIP 465
Query: 464 VILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNA 523
I+++L++G + EAR+ +AA LF L+ + + IG IP LV L++ GT GKK+A
Sbjct: 466 NIIEILENG-NREARENSAAALFSLSMLDENKVTIG-LSNGIPPLVDLLQHGTLRGKKDA 523
Query: 524 VVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLAEDIQGTSTIL 583
+ A+F L L+ N + +DAG V L ++L N +I ++L++L LA +G I
Sbjct: 524 LTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLG-MIDEALSILLLLASHPEGRQAIG 582
Query: 584 KTSALPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREEVTASLAKDPSLMNSLYSLTTDG 643
+ S + ++ ++ T + KE S+LL L SN + A+L + L +TT G
Sbjct: 583 QLSFIETLVEFIRQGTPK-NKECATSVLLELGSNNSSFILAALQF--GVYEYLVEITTSG 639
Query: 644 TSQARKKARSLIKILHK 660
T++A++KA +LI+++ K
Sbjct: 640 TNRAQRKANALIQLISK 656
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 213/399 (53%), Gaps = 22/399 (5%)
Query: 269 METLSCLNPEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTE 328
+ET+SC PE+FRCP+S ELM DPV +++GQTYD+ IQKWL +GN CPKT + L +T
Sbjct: 69 LETVSC--PEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTA 126
Query: 329 LLPNTTLKKLIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFF 388
L PN ++++I ++C NG+ KS+ + ++ + L +
Sbjct: 127 LTPNLLIREMISKWCKKNGLET-----KSQYHPNLVNEDETVTRSDREIFNSLLCKVSSS 181
Query: 389 GTNEEKNKAAYEIRLLAKSNIFNRSCIVES-GAIPPLLNLL---SSPDQCVQENAVAALL 444
++K+ AA E+RLL + R+ ES I L+N L S+PD+ +QE+ V LL
Sbjct: 182 NLQDQKS-AAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLL 240
Query: 445 KLSKH-TSGKKVIVESGG-LKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETP 502
+S H S KK++ E+ + +++ L+ G ++ R AAA +F L+++ + LIG++
Sbjct: 241 NISIHDDSNKKLVCENPNVIPLLIDALRRG-TVATRSNAAAAIFTLSALDSNKVLIGKSG 299
Query: 503 KAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELI 562
P L+ L+EEG K+ AIF L ++ N + + G V +L +++ L
Sbjct: 300 ILKP-LIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNG----LY 354
Query: 563 TDS-LAVLANLAEDIQGTSTILKTSALPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREE 621
D LA+LA L + + + + ++ + + + KE + IL ++C + R +
Sbjct: 355 VDELLAILAMLVTHWKAVEELGELGGVSWLLKITRESECKRNKENAIVILHTICFSDRTK 414
Query: 622 VTASLAKDPSLMNSLYSLTTDGTSQARKKARSLIKILHK 660
+ ++ + ++ L+ +GTS+A++KA ++ L K
Sbjct: 415 W-KEIKEEENAHGTITKLSREGTSRAQRKANGILDRLRK 452
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 230/477 (48%), Gaps = 95/477 (19%)
Query: 262 QIDVRCNMETLSCLNPEDFRCPISLELMTDPVTVSTGQTYD------------------- 302
Q +RC + P DFRC +SLELMTDPV V++GQT++
Sbjct: 231 QAQLRCPVRV-----PSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTR 285
Query: 303 --------------RSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLKKLIHQFCADNGI 348
R+ + W + N+ P E + ++E P L + + ++NG
Sbjct: 286 QALSHTTLTPNFIVRAFLASWCETNNVYPPDPLELIHSSEPFP--LLVESVRASSSENGH 343
Query: 349 S-------------------------LAKSGRKS-----RDITRT--------------- 363
S + K+ R + R +TR+
Sbjct: 344 SESLDAEELRQVFSRSASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFPEERHWRHP 403
Query: 364 -IIPGS---PAAAEAMKLMSRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIVESG 419
IIP + ++ +++ + L L + + + +A IR+LA+++ NR I
Sbjct: 404 GIIPATVRETGSSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCE 463
Query: 420 AIPPLLNLLSSPDQCVQENAVAALLKLSKHTSGKKVIVESGGLKVILKVLKSGLSLEARQ 479
AIP L++LL S D+ +Q +AV LL LS + + K +I ESG + ++ VLK+G EA+
Sbjct: 464 AIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKA 523
Query: 480 IAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQK 539
+AATLF L+ ++ Y+ IGE AI LV L+ G+ GKK+A A+F L + N K
Sbjct: 524 NSAATLFSLSVIEEYKTEIGEA-GAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTK 582
Query: 540 VLDAGTVPLLADILASSNRTELITDSLAVLANLAEDIQGTSTILKTSALPVIIGLLQTLT 599
V++AG V L +++ + ++ ++ VLANLA +G I + +PV++ +++ L
Sbjct: 583 VIEAGAVRYLVELMDPA--FGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVE-LG 639
Query: 600 SRAGKEYCVSILLSLCSNAREEVTASLAKDPSLMNSLYSLTTDGTSQARKKARSLIK 656
S GKE + LL LC+++ + + + ++ L +LT GT++ ++KA++L+K
Sbjct: 640 SARGKENATAALLQLCTHSPKFCNNVIRE--GVIPPLVALTKSGTARGKEKAQNLLK 694
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 163/274 (59%), Gaps = 6/274 (2%)
Query: 382 LARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLSSPDQCVQENAVA 441
L L G+N+ K AA EIR L ++I NR I GAI PLL+LL S ++ QE+AV
Sbjct: 477 LVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVT 536
Query: 442 ALLKLSKHTSGKKVIVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGET 501
ALL LS K +IVE G ++ ++ VL +G + A++ +AA+LF L+ ++ R+ IG++
Sbjct: 537 ALLNLSISELNKAMIVEVGAIEPLVHVLNTG-NDRAKENSAASLFSLSVLQVNRERIGQS 595
Query: 502 PKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTEL 561
AI ALV L+ +GT GKK+A A+F L ++ N +++ A V L ++L E+
Sbjct: 596 NAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPD--LEM 653
Query: 562 ITDSLAVLANLAEDIQGTSTILKTSALPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREE 621
+ ++A+LANL+ +G I++ +P+++ + L S+ GKE S+LL LC N+ +
Sbjct: 654 VDKAVALLANLSAVGEGRQAIVREGGIPLLVETVD-LGSQRGKENAASVLLQLCLNSPKF 712
Query: 622 VTASLAKDPSLMNSLYSLTTDGTSQARKKARSLI 655
T L + + L +L+ GT +A++KA+ L+
Sbjct: 713 CTLVLQE--GAIPPLVALSQSGTQRAKEKAQQLL 744
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 55/75 (73%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLK 336
P FRCP+S ELM DPV V++GQT+DR+SI+KWL G +CP+T + LT+ EL+PN T+K
Sbjct: 239 PPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTVK 298
Query: 337 KLIHQFCADNGISLA 351
+I + N I+LA
Sbjct: 299 AMIASWLEANRINLA 313
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 157/262 (59%), Gaps = 7/262 (2%)
Query: 394 KNKAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLSSPDQCVQENAVAALLKLSKHTSGK 453
+ +A E+RLLAK N+ NR I SGAI L+ LL S D QENAV ALL LS + + K
Sbjct: 558 QRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNK 617
Query: 454 KVIVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIE 513
K I ++G ++ ++ VL++G S EA++ +AATLF L+ ++ + IG++ AI LV L+
Sbjct: 618 KAIADAGAIEPLIHVLENG-SSEAKENSAATLFSLSVIEENKIKIGQS-GAIGPLVDLLG 675
Query: 514 EGTDCGKKNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLA 573
GT GKK+A A+F L + Q N ++ +G V L D++ + ++ ++AVLANLA
Sbjct: 676 NGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPA--AGMVDKAVAVLANLA 733
Query: 574 EDIQGTSTILKTSALPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREEVTASLAKDPSLM 633
+G + I + +P+++ +++ L S GKE + LL L +N+ L + +
Sbjct: 734 TIPEGRNAIGQEGGIPLLVEVVE-LGSARGKENAAAALLQLSTNSGRFCNMVLQE--GAV 790
Query: 634 NSLYSLTTDGTSQARKKARSLI 655
L +L+ GT +AR+KA++L+
Sbjct: 791 PPLVALSQSGTPRAREKAQALL 812
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 54/72 (75%)
Query: 279 DFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLKKL 338
DF CP+SLE+MTDPV VS+GQTY+++ I++W+ G +CPKT + LT+T L+PN T+K L
Sbjct: 233 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKAL 292
Query: 339 IHQFCADNGISL 350
I +C N + L
Sbjct: 293 IANWCETNDVKL 304
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 412 RSCIVESGAIPPLLNLLSSPDQCVQENAVAALLKLSKHTSGK--KVIVESGGLKVILKVL 469
R+ I + G IP L+ ++ +ENA AALL+LS + SG+ ++++ G + ++ +
Sbjct: 739 RNAIGQEGGIPLLVEVVELGSARGKENAAAALLQLSTN-SGRFCNMVLQEGAVPPLVALS 797
Query: 470 KSGLSLEARQIAAATLFYL 488
+SG + AR+ A A L Y
Sbjct: 798 QSG-TPRAREKAQALLSYF 815
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 197/384 (51%), Gaps = 24/384 (6%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTE-LLPNTTL 335
P DFRCPISLE+M+DPV + +G T+DR SIQ+W+ +GN CP T L+ T L+PN L
Sbjct: 6 PNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHAL 65
Query: 336 KKLIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKN 395
+ LI F +SL +S R RT S + ++A L+S +++ +N K
Sbjct: 66 RSLILNFAH---VSLKESSRP-----RTQQEHSHSQSQA--LISTLVSQS---SSNASKL 112
Query: 396 KAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLSSPDQCVQENAVAALLKLSKHTSGKKV 455
++ + L K + R + ESGA+ L+ + S +Q +QE +++ LL LS K
Sbjct: 113 ESLTRLVRLTKRDSSIRRKVTESGAVRAALDCVDSCNQVLQEKSLSLLLNLSLEDDNKVG 172
Query: 456 IVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEG 515
+V G ++ I+ VL+ G S + + IAA L L V+ + IG P AI ALV L+ G
Sbjct: 173 LVADGVIRRIVTVLRVG-SPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVG 231
Query: 516 TDCGKKNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLAED 575
D +K + A++ L N ++V+D G+VP+L + S + ++ VL L +
Sbjct: 232 NDRERKESATALYALCSFPDNRKRVVDCGSVPILVEAADSG-----LERAVEVLGLLVKC 286
Query: 576 IQGTSTILKTSA-LPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREEVTASLAKDPSLMN 634
G + K S + V++ +L+ + G +Y + IL LC + E V K ++
Sbjct: 287 RGGREEMSKVSGFVEVLVNVLRN-GNLKGIQYSLFILNCLCCCSGEIVDE--VKREGVVE 343
Query: 635 SLYSLTTDGTSQARKKARSLIKIL 658
+ + + + R+ A L+ L
Sbjct: 344 ICFGFEDNESEKIRRNATILVHTL 367
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 115 bits (289), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 195/402 (48%), Gaps = 38/402 (9%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLK 336
P F CPISLE M DPVT+ TGQTY+RS+I KW G+ CP T ++L + + PN TL
Sbjct: 61 PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTLH 120
Query: 337 KLIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNK 396
+LI+ + + + + K +S D+ A++++ + + K
Sbjct: 121 QLIYTWFSQKYVLMKK---RSEDVQ----------GRAIEILGTLRKAK-----GKAKVH 162
Query: 397 AAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLSS-PDQCVQENAVAALLKLSKHTSGKKV 455
A E++ + ++ + +V+ G + + +LLS V A+A L+ L + K
Sbjct: 163 ALSELKQVVMAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGSEAIAILVNLELDSDSKAG 222
Query: 456 IVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEG 515
+++ + +++ +L G S+E + A + L KG+R + + + L++L++
Sbjct: 223 LMQPARVSLMVDMLNDG-SIETKINCARLIGRLVEEKGFRAELVSSHSLLVGLMRLVK-- 279
Query: 516 TDCGKKNAVVAIFGLLLSQGNHQKV----LDAGTVPLLADILASSNRTELITDSLAVLAN 571
D ++N V LL S H++V + G VP L D+L + E + +L VL +
Sbjct: 280 -DRRRRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLPCLD-VECLESALFVLDS 337
Query: 572 LAEDIQGTSTILKT-SALPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREEVTASLAKDP 630
L + +G + + + +P + LL ++ + Y +SIL S+C A EE + SLA +
Sbjct: 338 LCLESEGRIALKDSVNTIPHTVRLLMKVSEKC-TNYAISILWSVCKLASEECS-SLAVEV 395
Query: 631 SLMNSLYSLTTDGTSQA-RKKARSLIKI--LH----KFIETC 665
L L + G A ++++ L+K+ LH FI C
Sbjct: 396 GLAAKLLLVIQSGCDPALKQRSAELLKLCSLHYSDSMFISKC 437
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 190/403 (47%), Gaps = 40/403 (9%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLK 336
P F CPISLE M DPVT+ TGQTY+R +I KW G++ CP T ++L + + PN TL
Sbjct: 65 PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTLH 124
Query: 337 KLIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNK 396
LI+ + + + + K +S D+ A++++ + + +
Sbjct: 125 HLIYTWFSQKYVLMKK---RSEDVQ----------GRAIEILGTLKKAK-----GQARVH 166
Query: 397 AAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLSS-PDQCVQENAVAALLKLSKHTSGKKV 455
A E++ + +++ R +VE G + + +LL V VA L+ L + K
Sbjct: 167 ALSELKQIVIAHLMARKTVVEEGGVSVISSLLGPFTSHAVGSEVVAILVSLDLDSDSKSG 226
Query: 456 IVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEG 515
+++ + +I+ +L G S E + A + L KG+R + + + L++L++
Sbjct: 227 LMQPAKVSLIVDMLNDG-SNETKINCARLIRGLVEEKGFRAELVSSHSLLVGLMRLVK-- 283
Query: 516 TDCGKKNAVVAIFGLLLSQGNHQKV----LDAGTVPLLADILASSNRTELITDSLAVLAN 571
D +N V LL H++V + G VP L DIL S + E + +L VL
Sbjct: 284 -DKRHRNGVSPALRLLKPISVHKQVRSLMVSIGAVPQLVDILPSLD-PECLELALFVLDA 341
Query: 572 LAEDIQGTSTILKTSA--LPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREEVTASLAKD 629
L D++G + K SA +P + +L ++ Y +SIL S+C A EE + LA +
Sbjct: 342 LCTDVEGRVAV-KDSANTIPYTVRVLMRVSENC-TNYALSILWSVCKLAPEECSP-LAVE 398
Query: 630 PSLMNSLYSLTTDGTSQA-RKKARSLIKI--LH----KFIETC 665
L L + G A ++++ L+K+ LH FI C
Sbjct: 399 VGLAAKLLLVIQSGCDAALKQRSAELLKLCSLHYSDTMFISKC 441
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 185/395 (46%), Gaps = 24/395 (6%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLK 336
P FRCPISL+LM+DPVT+STGQTYDR+SI W+ GN CP T L++ L+PN TL+
Sbjct: 15 PYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNHTLR 74
Query: 337 KLIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMK-LMSRFLARRLFFGTNEEKN 395
+LI ++C N +S + R P PA +++ L+S+ A + +
Sbjct: 75 RLIQEWCVAN---------RSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRA 125
Query: 396 KAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLL-----SSPDQCVQENAVAALLKLSKHT 450
A +R LA+ + NR I A L+ +L ++ + ALL L T
Sbjct: 126 AAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLHMT 185
Query: 451 SGKKVIVESGGLKV-ILKVLKSGLSLEARQIAAATL-FYLTSVKGY--RKLIGETPKAIP 506
+ V S +V + L S+E R AAA + LT K + +I +
Sbjct: 186 ETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFE 245
Query: 507 ALVKLIEEGTDCGK--KNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITD 564
++ L++ + K + AIF L L + + AG +L D LA+
Sbjct: 246 GVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTER 305
Query: 565 SLAVLANLAEDIQGTSTILKTS-ALPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREEVT 623
LA + L +G + + + +P+++ + ++ RA EY LL+LC+ A E
Sbjct: 306 GLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRA-TEYAAGALLALCT-AEERCR 363
Query: 624 ASLAKDPSLMNSLYSLTTDGTSQARKKARSLIKIL 658
A + L + +D T +A++KA+ L+K+L
Sbjct: 364 DEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLL 398
>sp|Q3E9F7|PUB46_ARATH Putative U-box domain-containing protein 46 OS=Arabidopsis thaliana
GN=PUB46 PE=3 SV=1
Length = 458
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 193/400 (48%), Gaps = 36/400 (9%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLK 336
P++F C +S +M +PV +++GQTY++ I +WLK CPKT + L++ +PN +
Sbjct: 73 PKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLK-HERTCPKTKQVLSHRLWIPNHLIS 131
Query: 337 KLIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTN-EEKN 395
LI Q+C N K P AE L +R+ ++ ++
Sbjct: 132 DLITQWCLVNKYDHQK-------------PSDELVAELFTSDIEALLQRVSSSSSVADQI 178
Query: 396 KAAYEIRLLAKS----NIFNRSCIVESGAIPPLLNLLSSPDQCV------QENAVAALLK 445
+AA E+R K +F + I +S I LL+ LS+ D+ V QEN V AL
Sbjct: 179 EAAKELRHQTKKFPNVRVFFVAGIHDS--ITRLLSPLSTLDEAVDSSLELQENIVTALFN 236
Query: 446 LSKHTSGKKVIVESG-GLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKA 504
LS S K VI E+ + ++ K LK G E R+ AAATL L+++ + +IG + +A
Sbjct: 237 LSILESNKTVIAENCLVIPLLTKSLKQGTD-ETRRNAAATLSSLSAIDSNKIIIGNS-EA 294
Query: 505 IPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVLDAGTV-PLLADILASSNRTELIT 563
+ AL+ LIEEG K A +F L + N KV+ AG + I A SN EL
Sbjct: 295 VKALIDLIEEGDLLATKEATSTVFNLCIVLENKGKVVSAGLIHAATKKIKAGSNVDEL-- 352
Query: 564 DSLAVLANLAEDIQGTSTILKTSALPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREEVT 623
L++LA ++ + + K + + +L+ +S E V I+ ++ R+
Sbjct: 353 --LSLLALISTHNRAVEEMDKLGFIYDLFSILRKPSSLLTGENAVVIVFNMYDRNRDRSR 410
Query: 624 ASLAKDPSLMNSLYS-LTTDGTSQARKKARSLIKILHKFI 662
+ + + ++ L G+ +A +KA+ +++ + +F+
Sbjct: 411 LKVVGEEENQHGTFTKLAKQGSVRAARKAQGILQWIKRFV 450
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 162/698 (23%), Positives = 294/698 (42%), Gaps = 125/698 (17%)
Query: 64 ILLIF--FEEIRDRGLNLSDLVVLCFSELHLTFQKVQFLMEDCTREGAKLWVLMKSQFIA 121
+L IF EE R R + S + LC LH+ +K + +++ C+ E +KL++ + +
Sbjct: 33 VLSIFPSLEEARPR--SKSGIQTLC--SLHIALEKAKNILQHCS-ECSKLYLAITGDAVL 87
Query: 122 TQFR----VLIRAIATALDVFPL----DTVDICGEVKELVDLVAKQARKAKFELDKEDER 173
+F LI ++ D+ P +DI GE++ KF LD ++
Sbjct: 88 LKFEKAKSALIDSLRRVEDIVPSSIGSQILDIVGELEH-----------TKFLLDPSEKE 136
Query: 174 AMKRVLSILNYFEKGIEPDSGFMTWVLDY-------LEIKSWSDCNSEIKFLEELVALEC 226
R++++L ++G + D+G + L+ L I S +E + L++++
Sbjct: 137 VGDRIIALL---QQGKKFDNGSDSTELEIFHQAATRLSITSSRSALAERRALKKVIDRAR 193
Query: 227 SDSEEREVPFLSSLVGFM-SYCRVVIFETLDYRSS---------------DQIDV----- 265
+ ++R+ ++ L+ M Y ++ E +D S D+++
Sbjct: 194 VEEDKRKESIVAYLLHLMRKYSKLFRSEMMDENDSPCSTPCSPTGQGPNEDRVNAFGRQL 253
Query: 266 ----RCNMETLSC-------LNPEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGN 314
N + ++ + PE+ RCPISL+LM DPV +++GQTY+R I+KW G+
Sbjct: 254 SKFGSINYKPMNSRKSGQMPIPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGH 313
Query: 315 MLCPKTGEKLTNTELLPNTTLKKLIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEA 374
CPKT ++L + L PN +K LI +C NGI++ +S D+ + S + +
Sbjct: 314 NSCPKTQQQLPHLSLTPNYCVKGLIASWCEQNGITVPTGPPESLDLNYWRLAMSDSESPN 373
Query: 375 MKLMSRF---LARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLSSP 431
K + + + EE + E + K+N + E + ++L+
Sbjct: 374 SKSVDSVGLCTPKDIRVVPLEESSTIESERQQKEKNNAPDE-VDSEINVLEGYQDILAIV 432
Query: 432 D-------QCVQENAVAALLKLSKHTSGKKVIVESGGLKVILKVLKSGL---SLEARQIA 481
D +C V LLK + + ++ +G ++ L+ L+S + + A++
Sbjct: 433 DKEEDLAKKCKVVENVRILLK--DNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETG 490
Query: 482 AATLFYLTSVKGYRKLIGETPKAIPALVKLI----EEGT--------DC--------GKK 521
A LF L K + T IP L K+I +G C G
Sbjct: 491 AMALFNLAVNNNRNKELMLTSGVIPLLEKMISCSQSQGPATALYLNLSCLEKAKPVIGSS 550
Query: 522 NAVVAIFGLLLSQGNHQKVLDA-----------GTVPLL--------ADILASSNRTELI 562
AV LLL Q LDA +P L +LAS+ I
Sbjct: 551 QAVSFFVNLLLQDTKTQCKLDALHALYNLSTYSPNIPTLLSSNIIKSLQVLASTGNHLWI 610
Query: 563 TDSLAVLANLAEDIQGTSTILKTSALPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREEV 622
SLAVL NLA +G ++ T + + + +E VS L+ LC+ + +
Sbjct: 611 EKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGSESCI 670
Query: 623 TASLAKDPSLMNSLYSLTTDGTSQARKKARSLIKILHK 660
L + ++ SL S++ +G+ + R K++ L+ + +
Sbjct: 671 QMVLQE--GVIPSLVSISVNGSPRGRDKSQKLLMLFRE 706
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 165/352 (46%), Gaps = 23/352 (6%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAG-NMLCPKTGEKLTNTELLPNTTL 335
P FRCPISLELM DPVTV TGQTYDR+SI+ W+ G N CP T L++ L+PN TL
Sbjct: 15 PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHTL 74
Query: 336 KKLIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMK-LMSRFLARRLFFGTNEEK 394
++LI ++C N +S + R P PA +++ L+S+ A + +
Sbjct: 75 RRLIQEWCVAN---------RSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSR 125
Query: 395 NKAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLL---SSPDQCVQEN-AVAALLKLSKHT 450
A +R A+ + NR I A L+ +L ++ + V E+ A+ +L +++
Sbjct: 126 AAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPN 185
Query: 451 SGKKVIVESGGLKVILKVLKSGLSLEARQIAAATLFYL---TSVKGYRKLIGETPKAIPA 507
+ + G ++ + ++L S+E R AAA + + T + I +
Sbjct: 186 QFVSISSDPGRVEFLTRLLFDS-SIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEG 244
Query: 508 LVKLIEEGTDCGK--KNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDS 565
++ L+ + K + +F L + + AG +L D LA+ +
Sbjct: 245 VLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERA 304
Query: 566 LAVLANLAEDIQGTSTILKTS-ALPVIIGLLQTLTSRAGKEYCVSILLSLCS 616
LA + L +G + + + +P+++ + ++ RA EY LL+LC+
Sbjct: 305 LATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRA-TEYAAGALLALCT 355
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 200/433 (46%), Gaps = 55/433 (12%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLK 336
PE+ RCPISL+LM DPV +++GQTY+R I+KW G+ CPKT ++L++ L PN +K
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVK 339
Query: 337 KLIHQFCADNGISLAKSGRKSRDI--------------TRT-------------IIP--- 366
LI +C NG+ + +S D+ TR+ ++P
Sbjct: 340 ALISSWCEQNGVQVPDGPPESLDLNYWRLALSVSESTDTRSAKRVGSCKLKDVKVVPLEE 399
Query: 367 ---------GSPAAAEAMKLMSR---FLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSC 414
S + + L+ R L T +K + +IR+L K + R
Sbjct: 400 SGTIKEEACESEYQEDQVTLVERCTELLTTLTDVDTLRKKCRVVEQIRVLLKDDEEARIL 459
Query: 415 IVESGAIPPLLNLLSSP----DQCVQENAVAALLKLS-KHTSGKKVIVESGGLKVILKVL 469
+ E+G + LL L S + Q+ AL L+ + K++++ SG + ++ ++L
Sbjct: 460 MGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEML 519
Query: 470 KSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCG-KKNAVVAIF 528
+ + A L+ ++ + +IG + A+P +V L+ T+ K +A+ ++F
Sbjct: 520 ---CNPHSHGSVTAIYLNLSCLEEAKPVIGSS-LAVPFMVNLLWTETEVQCKVDALHSLF 575
Query: 529 GLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLAEDIQGTSTILKTSAL 588
L N +L A V L L S+ SLAVL NL + G ++ +L
Sbjct: 576 HLSTYPPNIPCLLSADLVNALQS-LTISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPSL 634
Query: 589 PVIIGLLQTLTSRAGKEYCVSILLSLCSNAREEVTASLAKDPSLMNSLYSLTTDGTSQAR 648
+ + +E VS+LL LC+++ E+ + + ++ SL S++ +GT + R
Sbjct: 635 VSNLCTILDTGEPNEQEQAVSLLLILCNHS--EICSEMVLQEGVIPSLVSISVNGTQRGR 692
Query: 649 KKARSLIKILHKF 661
++A+ L+ + +
Sbjct: 693 ERAQKLLTLFREL 705
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 148/664 (22%), Positives = 283/664 (42%), Gaps = 88/664 (13%)
Query: 64 ILLIFFEEIRDRGLNLSDLVVLCFSELHLTFQKVQFLMEDCTREGAKLWVLMKSQFIATQ 123
+L IF R + S + LC LH+ +K + +++ C+ E +KL++ + + +
Sbjct: 33 VLSIFPSLEGARPRSKSGIQALC--SLHIALEKAKNILQHCS-ECSKLYLAITGDAVLLK 89
Query: 124 FR----VLIRAIATALDVFPLDTVDICGEVKELVDLVAKQARKAKFELDKEDERAMKRVL 179
F LI + D+ P I ++ E+V + +F LD ++ +++
Sbjct: 90 FEKAKIALIDGLKRVEDIVP---SSIGSQILEIVG----ELENTRFMLDPSEKEVGDQII 142
Query: 180 SILNYFEKGIEPDSGFMTWVLDY----LEIKSWSDCNSEIKFLEELVALECSDSEEREVP 235
++L +K + + L I S +E + L++L+ ++ ++R+
Sbjct: 143 ALLQQGKKFDNCNDNTELEIFHRAATRLSITSSRVALAERRALKKLIDRARAEEDKRKES 202
Query: 236 FLSSLVGFMSYC-RVVIFETLDYRSS----------DQIDVR-----------CNMETLS 273
++ L+ M C ++ E LD S D V N + ++
Sbjct: 203 IVAYLLHLMRKCSKLFRSEILDENDSPGSYPCSPNEDHGSVHGFGRQLSRFGSLNDKPMN 262
Query: 274 CLN-------PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTN 326
+N PE+ RCPISL+LM DPV +++GQTY+R I+KW G+ CPKT ++L +
Sbjct: 263 SINSGQMPVPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPH 322
Query: 327 TELLPNTTLKKLIHQFCADNGISLAKSGRKSRDIT--RTIIPGSPAA-AEAMKLMSRFLA 383
L PN +K LI +C NG + +S+D+ R + S + ++++ + +
Sbjct: 323 ISLTPNNCVKGLIASWCEQNGTQIPSGPPESQDLDYWRLALSDSESTKSQSVNSIGSYKL 382
Query: 384 RRLFFGTNEEKNKAAYEIRLLAKS-------------NIFNRSCIVESGAIPPLLNLLSS 430
+ + EE E + +S N+ R LL +L+
Sbjct: 383 KGVKIVPLEENGTTVVERQNTEESFVSDDDDEEDSDINVLER--------YQDLLAVLNE 434
Query: 431 PDQCVQENAVAALLK-LSKHTSGKKVIVESGG-LKVILKVLKSGL---SLEARQIAAATL 485
+ ++ V ++ L K ++ + + G ++ +L+ L S + + A+ A L
Sbjct: 435 EEGLEKKCKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMAL 494
Query: 486 FYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQK--VLDA 543
F L K + T I L K+I G A+ L LS + K + +
Sbjct: 495 FNLAVNNNRNKELMLTSGVIRLLEKMISSAESHGSATALY----LNLSCLDEAKSVIGSS 550
Query: 544 GTVPLLADILASSNRTELITDSLAVLANLAEDIQGTSTILKTSALPVIIGLLQTLTSRAG 603
VP L +L T+ D+L L NL+ +L ++ + + GLL +
Sbjct: 551 QAVPFLVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENLW 610
Query: 604 KEYCVSILLSLCSN--AREEVTASLAKDPSLMNSLYSLTTDGTSQARKKARSLIKILHKF 661
E +++LL+L S+ ++E +S +++SL ++ G + +++A S + IL
Sbjct: 611 IEKSLAVLLNLASSQEGKDEAVSSQG----MISSLATVLDMGDTTEQEQAVSCLLILCNG 666
Query: 662 IETC 665
E+C
Sbjct: 667 RESC 670
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 139/276 (50%), Gaps = 14/276 (5%)
Query: 392 EEKNKAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLSSP----DQCVQENAVAALLKLS 447
E+K K +IRLL K + R + +G + LL L S + Q++ AL L+
Sbjct: 439 EKKCKVVEKIRLLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLA 498
Query: 448 -KHTSGKKVIVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIP 506
+ K++++ SG ++++ K++ S E+ A A L+ + + +IG + +A+P
Sbjct: 499 VNNNRNKELMLTSGVIRLLEKMISSA---ESHGSATALYLNLSCLDEAKSVIGSS-QAVP 554
Query: 507 ALVKLIEEG--TDCGKKNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITD 564
LV+L+++ T C K +A+ A++ L N +L + + L +LAS+ I
Sbjct: 555 FLVQLLQKEIETQC-KLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENLWIEK 613
Query: 565 SLAVLANLAEDIQGTSTILKTSALPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREEVTA 624
SLAVL NLA +G + + + + + + +E VS LL LC N RE
Sbjct: 614 SLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVSCLLILC-NGRESCIQ 672
Query: 625 SLAKDPSLMNSLYSLTTDGTSQARKKARSLIKILHK 660
+ ++ ++ SL S++ +GT + R+K++ L+ + +
Sbjct: 673 MVLQE-GVIPSLVSISVNGTPRGREKSQKLLMLFRE 707
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 158/353 (44%), Gaps = 34/353 (9%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNM-LCPKTGEKLTNTELLPNTTL 335
P F CPISLE+M DPV VSTG TYDR SI+KWL AG CP T + +T+ +L PN TL
Sbjct: 13 PPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNHTL 72
Query: 336 KKLIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKN 395
++LI +C N S + R P P ++ + R A ++E +
Sbjct: 73 RRLIQSWCTLNA---------SYGVERIPTPRPPICKSEIEKLIRDSA-----SSHENQV 118
Query: 396 KAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLSSPDQCVQENA--VAALLKLSKHTSGK 453
K +R + N N+ C+ E+ +P L + S D EN L L H
Sbjct: 119 KCLKRLRQIVSENATNKRCL-EAAGVPEFLANIVSND---SENGSLTDEALNLLYHLETS 174
Query: 454 KVIVESGG--------LKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAI 505
+ ++++ +K + K+++ G+ E+R A L + V + + P+
Sbjct: 175 ETVLKNLLNNKKDNNIVKSLTKIMQRGM-YESRVYATLLLKNILEVADPMQSMTLKPEVF 233
Query: 506 PALVKLIEEGTDCGKKNAVVAIFGLLLSQG-NHQKVLDAGTVPLLADILASSNRTELITD 564
+V+++++ A + I + G N K ++AG + ++ ++L + T
Sbjct: 234 TEVVQILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRG 293
Query: 565 ---SLAVLANLAEDIQGTSTILKTSALPVIIGLLQTLTSRAGKEYCVSILLSL 614
++ VL L + +G + L A ++ S+ + V +LLS+
Sbjct: 294 PEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSV 346
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 183/404 (45%), Gaps = 22/404 (5%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLK 336
P +F+CPIS++LM DPV +STG TYDR SI+ W+ +GN CP T LT + +PN T++
Sbjct: 32 PPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNHTIR 91
Query: 337 KLIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNK 396
K+I +C + G L I R P P + +SR L+ G E+
Sbjct: 92 KMIQGWCVEKGSPL---------IQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGV 142
Query: 397 AAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLS--SPDQ--CVQENAVAALLK--LSKHT 450
+I+ L + NR C+ E+ L + S D+ N + +LL
Sbjct: 143 IIEKIKKLGDESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEILSLLTWMFPIGL 202
Query: 451 SGKKVIVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIP-ALV 509
G + + + + +LKS RQ AA + + S+ R + ALV
Sbjct: 203 EGISKLASATSFRCVAGLLKST-DDSVRQNAAFIMKEILSLDETRVHSFAVENGVAEALV 261
Query: 510 KLIEE-GTDCGKKNAVVAIFGLLLSQGN-HQKVLDAGTVPLLADILASSNRTELITDSLA 567
KLI + + K++++AI+ ++L + + L+ G V + +++ + + + +LA
Sbjct: 262 KLIRDSVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENS-VCEKALA 320
Query: 568 VLANLAEDIQGTSTILKTS-ALPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREEVTASL 626
VL + E G + K + +P+++ + ++ A + +S++L L
Sbjct: 321 VLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRS-SMSMILKLWKTGNTVAVEDA 379
Query: 627 AKDPSLMNSLYSLTTDGTSQARKKARSLIKILHKFIETCSSGVE 670
+ + L L + ++KA L+K+++ ++ S V+
Sbjct: 380 VRLGAFQKVLLVLQVGYGEETKEKATELLKMMNTQMKLMSDCVD 423
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 175/399 (43%), Gaps = 35/399 (8%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLK 336
P F+CPIS ELM DPV +++G TYDR +I+KW ++G CP T LT+ E +PN T++
Sbjct: 34 PSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNHTIR 93
Query: 337 KLIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNK 396
++I +C G SL I R P P + + + L+ G +
Sbjct: 94 RMIQGWC---GSSLGGG------IERIPTPRVPVTSHQVSEICERLSAATRRGDYAACME 144
Query: 397 AAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLSSPDQCVQENAVAALL----------KL 446
++ L K + NR C+ E+GA L + ENA A+LL L
Sbjct: 145 MVTKMTRLGKESERNRKCVKENGAGLVLCVCFDA----FSENANASLLLEETVSVLTWML 200
Query: 447 SKHTSGKKVIVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIP 506
G+ + + ++++L++G A I +T V K+ G
Sbjct: 201 PIGLEGQSKLTTTSSFNRLVELLRNGDQNAAFLIKELLELNVTHVHALTKING----VQE 256
Query: 507 ALVKLIEEGTDCGKKNAVVAIFGLLLS-QGNHQKVLDAGTVPLLADILASSNRTELITDS 565
A +K I + C N++++I ++L+ Q + L+ V + ++L S + + +
Sbjct: 257 AFMKSINRDSTC--VNSLISIHHMILTNQETVSRFLELDLVNITVEMLVDSENS-VCEKA 313
Query: 566 LAVLANLAEDIQGTSTILKTS-ALPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREEVTA 624
L VL + E +G + + +P+ L++ + + K+ VS++ +C +
Sbjct: 314 LTVLNVICETKEGREKVRRNKLVIPI---LVKKILKISEKKDLVSVMWKVCKSGDGSEVE 370
Query: 625 SLAKDPSLMNSLYSLTTDGTSQARKKARSLIKILHKFIE 663
+ + + L ++K L+K+++K ++
Sbjct: 371 EALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMNKVMK 409
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 195/425 (45%), Gaps = 43/425 (10%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLK 336
P F+CPISL++M PV++ TG TYDR+SIQ+WL GN CP T + L + +PN TL+
Sbjct: 13 PSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQ 72
Query: 337 KLIHQFCADNGISLAKSGRKSRDITRTIIPGS----PAAAEAMKLMSRFLARRLFFGTNE 392
+LI+ + +D+ GR+ + + P S P E L+ R ++
Sbjct: 73 RLINIW-SDS------IGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMSL-------- 117
Query: 393 EKNKAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLSSPDQCVQENAVAAL-----LKLS 447
+ +I K + NR + + P+L + + E + A+ +K+
Sbjct: 118 ---ENLMKIVRFVKDSDSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILDSIKVD 174
Query: 448 KHTSGKKVIVESGG--LKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAI 505
+ ++ GG L IL ++ G +LE++ + L +++ + +I E +
Sbjct: 175 RERLSNLMLANDGGDCLTAILLAIQRG-NLESKIESVRVLDWISFDAKSKLMIAERDGVL 233
Query: 506 PALVKLIEEGTDCGKKNAVVAIFGLLL----SQGNHQKVLDAGTVPLLADILASSNRTEL 561
++K I T+ + + A L+ S+ K++ A + + DIL + T +
Sbjct: 234 TEMMKSI-SITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNV 292
Query: 562 -ITD-SLAVLANLAEDIQGTSTILKTSALPVIIGLLQTL--TSRAGKEYCVSILLSLCSN 617
+T+ SL +L L+ +G I + G+++ L S E+ V+IL LC
Sbjct: 293 AVTEKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYV 352
Query: 618 AREEVTA--SLAKDPSLMNSLYSLTTDGTSQARKKARSLIKILHKFIETCSSGVEGSAVP 675
RE+ T ++ + + L + ++ ++ R+ A+ LIK+L KF + + E +
Sbjct: 353 FREDKTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVL-KFNSSALAAYE-TKTT 410
Query: 676 HERPF 680
H PF
Sbjct: 411 HIMPF 415
>sp|Q9FJP6|PUB38_ARATH U-box domain-containing protein 38 OS=Arabidopsis thaliana GN=PUB38
PE=1 SV=1
Length = 556
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 138/271 (50%), Gaps = 15/271 (5%)
Query: 401 IRLLAKSNIFNRSCIVESGAIPPLLNLLSSPDQCVQENAVAALLKLSKHTSGKKVIVESG 460
+R + ++N R + + L N++ S VQ NA+A+L+ LS K IV G
Sbjct: 248 MRKMTRTNDEARVSLCSPRILSLLKNMIVSRYSLVQTNALASLVNLSLDKKNKLTIVRLG 307
Query: 461 GLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGK 520
+ +++ VLKSG S EA++ AA T+F L+ + IG P L L +D +
Sbjct: 308 FVPILIDVLKSG-SREAQEHAAGTIFSLSLEDDNKMPIGVLGALQPLLHALRAAESDRTR 366
Query: 521 KNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLAEDIQGTS 580
++ +A++ L L+Q N K++ G VP L ++ S E + +L V+ NLA +G S
Sbjct: 367 HDSALALYHLTLNQTNRSKLVRLGAVPALFSMVRSG---ESASRALLVICNLACCSEGRS 423
Query: 581 TILKTSALPVIIGLL---------QTLTSRAGKEYCVSILLSLCSNAREEVTASLAKDPS 631
+L +A+ +++G L + +S + +E CV+ L +L + LAK+
Sbjct: 424 AMLDANAVAILVGKLREEWTEEPTEARSSSSARENCVAALFALSHESLR--FKGLAKEAR 481
Query: 632 LMNSLYSLTTDGTSQARKKARSLIKILHKFI 662
+ L + GT +AR+KA+ +++++ + +
Sbjct: 482 AVEVLKEVEERGTERAREKAKKILQLMRERV 512
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 165/382 (43%), Gaps = 63/382 (16%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNM-LCPKTGEKLTNTELLPNTTL 335
P F CPISL++M DPV VSTG TYDR SI+KWL +G CP T + +T T+L PN TL
Sbjct: 8 PSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHTL 67
Query: 336 KKLIHQFCADNGISLAKSGRKSRDITRTIIPGSP-AAAEAMKLMSRFLARRLFFGTNEEK 394
++LI +C N S I R P P +E KL+ + L +
Sbjct: 68 RRLIQSWCTLNA---------SYGIERIPTPKPPICKSEIEKLIKESSSSHL------NQ 112
Query: 395 NKAAYEIRLLAKSNIFNRSCIVESGAIPPLL-NLLSSP-----------------DQC-- 434
K +R + N N+ C+ E+ +P L N++S+ D C
Sbjct: 113 VKCLKRLRQIVSENTTNKRCL-EAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQS 171
Query: 435 ------------VQENAVAALLKL-SKHTSGKKVIVESGG---LKVILKVLKSGLSLEAR 478
+ + A++ L L + T+ K ++ G +K + K+++ G+ E+R
Sbjct: 172 NMLENRFDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGI-YESR 230
Query: 479 QIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQG-NH 537
AA L L V ++I + +++++ + + + I + G N
Sbjct: 231 AYAALLLKKLLEVADPMQIILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNR 290
Query: 538 QKVLDAGTVP-----LLADILASSNRTELITDSLAVLANLAEDIQGTSTILKTSALPVII 592
K ++ GT+ L+ D +S R + ++ VL L + +G + L A ++
Sbjct: 291 HKAVEGGTISMIIELLMDDTFSSERRNSEM--AMVVLDMLCQCAEGRAEFLNHGAAIAVV 348
Query: 593 GLLQTLTSRAGKEYCVSILLSL 614
S+ E V +LLS+
Sbjct: 349 SKKILRVSQITSERAVRVLLSV 370
>sp|Q0WUF6|PUB41_ARATH U-box domain-containing protein 41 OS=Arabidopsis thaliana GN=PUB41
PE=2 SV=1
Length = 559
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 120/236 (50%), Gaps = 11/236 (4%)
Query: 424 LLNLLSSPDQCVQENAVAALLKLSKHTSGKKVIVESGGLKVILKVLKSGLSLEARQIAAA 483
L +LL S VQ NA A+++ LS K IV SG + +++ VLKSG + EA++ A
Sbjct: 281 LRSLLVSRYNLVQTNAAASVVNLSLEKQNKVKIVRSGFVPLLIDVLKSGTT-EAQEHVAG 339
Query: 484 TLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVLDA 543
LF L + +IG P L L ++ +++A +A++ L L N +++ A
Sbjct: 340 ALFSLALEDENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRA 399
Query: 544 GTVPLLADILASSNRTELITDSLAVLANLAEDIQGTSTILKTSALPVIIGLLQTL---TS 600
G VP L ++ S + T I L VL NLA G +L +A+ +++G L+ + S
Sbjct: 400 GAVPTLLSMVRSGDSTSRI---LLVLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDS 456
Query: 601 RAGKEYCVSILLSLC-SNAREEVTASLAKDPSLMNSLYSLTTDGTSQARKKARSLI 655
A +E CV++LL+LC N R LA + L + +G + ++KA ++
Sbjct: 457 EAARENCVAVLLTLCQGNLR---FRGLASEAGAEEVLMEVEENGNERVKEKASKIL 509
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLK 336
P +F CPI+ LM+DPV VS+GQT++R S+Q G + G + + ++PN +K
Sbjct: 32 PPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLSTVIPNLAMK 91
Query: 337 KLIHQFC 343
I +C
Sbjct: 92 STIFSWC 98
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLK 336
P FRCPISL++M PV++ TG TYDR+SIQ+WL GN CP T + L N + +PN TL+
Sbjct: 11 PTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQ 70
Query: 337 KLIH 340
+LI
Sbjct: 71 RLIE 74
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLK 336
P F+CPISL++M PV++STG TYDR SIQ+WL GN CP T + L N E +PN TL
Sbjct: 12 PCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLH 71
Query: 337 KLIHQF 342
+LI +
Sbjct: 72 RLIDHW 77
>sp|Q3E9F6|PUB47_ARATH Putative U-box domain-containing protein 47 OS=Arabidopsis thaliana
GN=PUB47 PE=3 SV=1
Length = 445
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 165/353 (46%), Gaps = 32/353 (9%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLK 336
P++F C +S ++M +P+ +++GQT+++S I +WLK CP+T + L + ++PN +
Sbjct: 66 PKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKHERT-CPRTKQVLYHRFMIPNHLIN 124
Query: 337 KLIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEKNK 396
++I ++C + K+ + D + G + L R + E++ +
Sbjct: 125 EVIKEWCLIHNFDRPKTSDEVID----LFTGD---------LESLLQRISSPSSVEDQTE 171
Query: 397 AAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLSSPDQCVQ-------ENAVAALLKLSKH 449
AA E+ L AK F+ C+ IP + L +P + EN V AL S
Sbjct: 172 AAKELALKAKR--FSSVCVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIFSTS 229
Query: 450 TSGKKVIVESG-GLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPAL 508
K ++ E+ L ++ K +K G L R +AAT+ L+ + +IG + + + AL
Sbjct: 230 EKNKTLVAENPLVLPLLAKYMKQGTVL-TRIHSAATVNSLSYTDSNKIIIGNS-EVLKAL 287
Query: 509 VKLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVLDAGTV-PLLADILASSNRTELITDSLA 567
+ +IEEG A A+ L + +K + G + + I A SN + L L+
Sbjct: 288 IHVIEEGDSLATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGSNVSML----LS 343
Query: 568 VLANLA-EDIQGTSTILKTSALPVIIGLLQTLTSRAGKEYCVSILLSLCSNAR 619
+LA ++ ++ Q T + + + +L+ S E V I+ ++C + +
Sbjct: 344 LLAFVSTQNHQTTEEMDNLGLIYDLFSILRNSNSLVNDENAVVIVYNICKSYK 396
>sp|Q3E9F5|PUB48_ARATH U-box domain-containing protein 48 OS=Arabidopsis thaliana GN=PUB48
PE=2 SV=1
Length = 456
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 188/404 (46%), Gaps = 44/404 (10%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLK 336
P++F+C +S +M DPV + +GQTY++ I +WL ++ CP + L L PN +
Sbjct: 75 PKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLN-HDLTCPTAKQVLYRVCLTPNHLIN 133
Query: 337 KLIHQFCADNGISLAKSGRKSRDI---TRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEE 393
+LI ++C N + K DI T G + + + S +A +
Sbjct: 134 ELITRWCLANKYD--RPAPKPSDIDYVTELFTDGIESLLQRISSPSSSVA---------D 182
Query: 394 KNKAAYEIRLLAKSNIFNRSCIVES--GAIPPLLNLL--------SSPDQCVQENAVAAL 443
+ +AA E+ L + + R ++ +I LL L S+P+ +QEN V AL
Sbjct: 183 QTEAAKELALQTEKFVNVRDFFIKELPDSITRLLTPLSVLGDEVDSNPE--LQENIVTAL 240
Query: 444 LKLSKHTSGKKVIVESGG-LKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETP 502
+S K V+ E+ + ++ K +K G S+ R+ A TL L+ + + +IG +
Sbjct: 241 FNMSTFEKNKTVLAENHQVIPLLAKSMKQG-SVVTRRNATLTLASLSDIDSNKIIIGNSV 299
Query: 503 KAIPALVKLIEEGTD-CGKKNAVVAIFGLLLSQ-GNHQKVLDAGTVP-LLADILASSNRT 559
A+ AL+ LI E D +A+ A+ L + N +K + G P + +I A N
Sbjct: 300 -ALKALIDLIGELDDLSATHDALCAVIDLCCDERENWKKAISLGLAPAAIKNIKARRN-- 356
Query: 560 ELITDSLAVLANLAEDIQGTSTILKTSALPVIIGLLQTLTSRAGKEYC---VSILLSLCS 616
+ +SLA LA ++ I + + L VI LL L + C V I+ ++ +
Sbjct: 357 --LFESLAALALIS---PHERVIQEVANLGVIYDLLSILRKTSCMVTCENAVVIVGNMYA 411
Query: 617 NAREE-VTASLAKDPSLMNSLYSLTTDGTSQARKKARSLIKILH 659
+RE + LA++ + + + T G+ A KA+ +++ ++
Sbjct: 412 KSRERSIKKILAEEENQHKTFTKIATQGSVVAVMKAQGILQCIN 455
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLK 336
PE F+C +S +M DPV +S+G T++R IQKW GN CP + KL + L PN LK
Sbjct: 220 PEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELK 279
Query: 337 KLIHQFCADNGISLAKSGRKSRDITRTI 364
I ++CA NG+ + RK + +I
Sbjct: 280 SQISEWCAKNGLDVQDPARKHVKASNSI 307
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 161/365 (44%), Gaps = 65/365 (17%)
Query: 271 TLSCLNPEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELL 330
T+ P+DF CPI+ ++ +DPVT+ TGQTY+R +IQ+WL GN CP T + L+ +L
Sbjct: 508 TIGSKPPKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTGNTTCPITRQALS-ANIL 566
Query: 331 P--NTTLKKLIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFF 388
P N LK+LI + N +++ + + P + + + K ++ + +
Sbjct: 567 PKTNYVLKRLIVSWKEQN-------PELAQEFSNSNTPRGSSCSPSAKDITMVSSIQRTT 619
Query: 389 GTNEEKNKAAYEIRLLAKSNIFNR-------SCIVESGAIPPLLNLLSS--PDQCVQEN- 438
+ +K K Y + ++N F R + ++ A+ ++N L+ C EN
Sbjct: 620 DSPSQKYKDDY---IRQRNNRFTRVSVGASPTSVLSQAAVETIINSLTPYITSLCTSENL 676
Query: 439 --------AVAALLKLSK-----HTSGKKVIVESGGLKVILKVLKSGLSLEARQIAAATL 485
+A L K SK H+ K V SG ++++L + L+ R++ ++
Sbjct: 677 QDCEQAVLEIARLWKDSKTDPQIHSYLSKPTVVSG----LVEILSASLN---REVLRRSI 729
Query: 486 FYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVLDAGT 545
+ L+ + + +GET + ++ DC +LL G + L
Sbjct: 730 YILSELIFSDERVGET-------LNSVDSDFDC---------LAMLLKNGLAEAAL---L 770
Query: 546 VPLLADILASSNRTELITDSLAVLANLAEDIQGTSTILKTSALPVIIGLLQTLTSRAGKE 605
+ L + A + ELI + V+ N +EDI + A + I L Q L G E
Sbjct: 771 IYQLRPVFAQLSEHELIPSLIQVIQNKSEDIDDFQLAIDPKAAAIAI-LEQILI--GGDE 827
Query: 606 YCVSI 610
Y S+
Sbjct: 828 YNRSV 832
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 166/377 (44%), Gaps = 68/377 (18%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLP--NTT 334
P+DF CPI+ ++ DPVT+ TGQTY+R +IQ+WL+ GN CP T + L+ +LP N
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLS-ASILPKTNYV 570
Query: 335 LKKLIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEK 394
LK+LI + N +++ + P + + + K + R+ + K
Sbjct: 571 LKRLITSWKEQN-------PELAQEFSNVNTPRGSSCSPSAKDIPMLSTRQRTTDSPNHK 623
Query: 395 NKAAYEIRLLAKSNIFNRSCIVES-------GAIPPLLNLLSS--PDQCVQEN------- 438
NK R SN F + I S A+ ++N L C EN
Sbjct: 624 NKDYARQR----SNRFMPAAITTSPTSVLSQAAVETIVNSLKPYISSLCTSENLPECEEA 679
Query: 439 --AVAALLKLSK-----HTSGKKVIVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSV 491
+A LLK SK H+ K + +G ++++L + + R++ +++ L+ +
Sbjct: 680 VLKIARLLKDSKTNPQIHSYLSKPTIING----LVEILSASRN---REVLRTSIYILSEL 732
Query: 492 KGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGL--LLSQGNHQKVLDAGTVPLL 549
+ ET ++ + + G A + I+ L + +Q + ++ +P L
Sbjct: 733 IFTDDSVAETLNSVDSDFDCLATLLKNGLAEAALLIYQLRPVFAQLSAHEL-----IPSL 787
Query: 550 ADILASSNRT----ELITDSL-AVLANLAEDIQG---------TSTILKTSALPVIIGLL 595
D++ + N +L+ D A +A L + + G S+++ + +P ++ L
Sbjct: 788 VDVIQNKNEELDDFQLVIDPKDAAIAILEQTLMGGDEYSRSLNASSVISANGIPTLVKYL 847
Query: 596 QTLTSRAGKEYCVSILL 612
+ + G+ VS+LL
Sbjct: 848 ERM---EGRRSVVSVLL 861
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 167/377 (44%), Gaps = 68/377 (18%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLP--NTT 334
P+DF CPI+ ++ DPVT+ TGQTY+R +IQ+WL+ GN CP T + L+ + +LP N
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLSAS-ILPKTNYV 570
Query: 335 LKKLIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNEEK 394
LK+LI + N +++ + P + + + K + R+ + K
Sbjct: 571 LKRLITSWKEQN-------PELAQEFSNVNTPRGSSCSPSAKDIPMLSTRQRTTDSPNHK 623
Query: 395 NKAAYEIRLLAKSNIFNRSCIVES-------GAIPPLLNLLSS--PDQCVQEN------- 438
NK R SN F + I S A+ ++N L C EN
Sbjct: 624 NKDYARQR----SNRFMPAAITTSPTSVLSQAAVETIVNSLKPYISSLCTSENLPECEEA 679
Query: 439 --AVAALLKLSK-----HTSGKKVIVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSV 491
+A LLK SK H+ K + +G ++++L + + R++ +++ L+ +
Sbjct: 680 VLKIARLLKDSKTNPQIHSYLSKPTIING----LVEILSASRN---REVLRTSIYILSEL 732
Query: 492 KGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGL--LLSQGNHQKVLDAGTVPLL 549
+ ET ++ + + G A + I+ L + +Q + ++ +P L
Sbjct: 733 IFTDDSVAETLNSVDSDFDCLATLLKNGLAEAALLIYQLRPVFAQLSAHEL-----IPSL 787
Query: 550 ADILASSNRT----ELITDSL-AVLANLAEDIQG---------TSTILKTSALPVIIGLL 595
D++ + N +L+ D A +A L + + G S+++ + +P ++ L
Sbjct: 788 VDVIQNKNEELDDFQLVIDPKDAAIAILEQTLMGGDEYSRSLNASSVISANGIPTLVKYL 847
Query: 596 QTLTSRAGKEYCVSILL 612
+ + G+ VS+LL
Sbjct: 848 ERM---EGRRSVVSVLL 861
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24
PE=1 SV=1
Length = 456
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 15/110 (13%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLT-NTELLPNTTL 335
P F CPISLE+M DPVT +G TYDR +I KWL+ CP T + L +++L PN L
Sbjct: 11 PNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKVPS-CPVTKQPLPLDSDLTPNHML 69
Query: 336 KKLIHQFCADNGISLAKSGRKSRDITRT----IIPGSPAAAEAMKLMSRF 381
++LI +C +N ++R + R + PG E +K + +F
Sbjct: 70 RRLIQHWCVEN---------ETRGVVRISTPRVPPGKLNVVEEIKNLKKF 110
>sp|Q9LQ92|PUB54_ARATH U-box domain-containing protein 54 OS=Arabidopsis thaliana GN=PUB54
PE=2 SV=1
Length = 308
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%)
Query: 278 EDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLKK 337
EDF+CPIS+E+M DP + G TY+ +KWL++G PKT + L N L+PN TL+
Sbjct: 235 EDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRI 294
Query: 338 LIHQFCADN 346
+I + N
Sbjct: 295 IIKDWLEKN 303
>sp|Q9STT1|PUB39_ARATH U-box domain-containing protein 39 OS=Arabidopsis thaliana GN=PUB39
PE=2 SV=1
Length = 509
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 10/276 (3%)
Query: 400 EIRLLAKSNIFNRSCIVESGAIPPLLNLLSSPDQCVQENAVAALLKLSKHTSGKKVIVES 459
++R +SN R + + L +L+ S VQ NA A+++ LS K IV S
Sbjct: 206 QLRKTTRSNETTRISLCTDRILSLLRSLIVSRYNIVQTNAAASIVNLSLEKPNKLKIVRS 265
Query: 460 GGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCG 519
G + +++ VLKSG S EA++ LF L + + +IG P L L ++
Sbjct: 266 GFVPLLIDVLKSG-STEAQEHVIGALFSLAVEEENKMVIGVLGAVEPLLHALRSSESERA 324
Query: 520 KKNAVVAIFGLLLSQGNHQKVLDAGTVPLLADILASSNRTELITDSLAVLANLAEDIQGT 579
+++A +A++ L L N +++ AG VP++ ++ S I L LA +E G
Sbjct: 325 RQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIRSGESASRILLLLCNLAACSE---GK 381
Query: 580 STILKTSALPVIIGLLQ----TLTSRAGKEYCVSILLSL-CSNAREEVTASLAKDPSLMN 634
+L +A+ +++G L+ + A +E CV LL+L N R AS A ++
Sbjct: 382 GAMLDGNAVSILVGKLRESGGAESDAAARENCVGALLTLSVGNMRFRGLASEAGAEEILT 441
Query: 635 SLYSLTTDGTSQARKKARSLIKILHKFIETCSSGVE 670
+ + G+ + ++KA +++ L G E
Sbjct: 442 EIVE-SESGSGRLKEKASKILQTLRGGGSEFGEGAE 476
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 151/353 (42%), Gaps = 35/353 (9%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQ--KWLKAGNMLCPKTGEKLTNTELLPNTT 334
P +F CPI+ LM+DPV V++GQT++R S+Q + L L T L+ ++PN
Sbjct: 11 PTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDGTQPDLST--VIPNLA 68
Query: 335 LKKLIHQFCADNGISLAKSGRKS--RDITRT----IIPGS----------PAAAEAMKLM 378
+K I +C N + + + + RT + PGS P AE
Sbjct: 69 MKSTILSWCDRNKMEHPRPPDYAYVEGVVRTRMDSLPPGSGHRIAKSEILPPVAENSNSN 128
Query: 379 SRFLARRLFFGTNEEKNKAAYEIRLLAKSNIFNRSCIVE-------SGAIPPL------- 424
S + + + + ++ L ++ N S ++ + PP+
Sbjct: 129 SDYDSVMGAIRSRSRTSLSSTTSLPLHQTRPINHSTRIQSSFSTSDYSSFPPMSPEEEEI 188
Query: 425 LNLLSSPDQCVQENAVAALLKLSKHTSGKKVIVESGGLKVILKVLKSGLSLEARQIAAAT 484
N L+S D E + L K ++ ++ + + + +L+ L + AAA+
Sbjct: 189 YNKLTSVDTIDHEQGLIQLRKTTRSNETTRISLCTDRILSLLRSLIVSRYNIVQTNAAAS 248
Query: 485 LFYLTSVKGYRKLIGETPKAIPALVKLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVLDAG 544
+ L S++ KL +P L+ +++ G+ +++ + A+F L + + N + G
Sbjct: 249 IVNL-SLEKPNKLKIVRSGFVPLLIDVLKSGSTEAQEHVIGALFSLAVEEENKMVIGVLG 307
Query: 545 TVPLLADILASSNRTELITDSLAVLANLAEDIQGTSTILKTSALPVIIGLLQT 597
V L L SS D+ L +L+ S ++K A+P+++ ++++
Sbjct: 308 AVEPLLHALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIRS 360
>sp|Q9CAA7|PUB42_ARATH Putative U-box domain-containing protein 42 OS=Arabidopsis thaliana
GN=PUB42 PE=2 SV=1
Length = 1033
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 157/375 (41%), Gaps = 96/375 (25%)
Query: 280 FRCPISLELMTDPVTVSTGQTYDRSSIQKWLKA-GN---MLCPKTGEKLTNTELLPNTTL 335
F CP++ E+M DPVT TG T +R ++ +W + GN + CP TG+KLT TEL N L
Sbjct: 250 FICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKLT-TELSANVVL 308
Query: 336 KKLIHQFCADN--------GISLAKSGRKS------RDITRTIIPGSPAAAEAMKLMSR- 380
K +I ++ N +L+ G +S RD+ T E K+ R
Sbjct: 309 KTIIQEWKVRNEAARIKVAHAALSLGGSESMVIDALRDLQMTC-----EGKEYNKVQVRE 363
Query: 381 -----FLARRLFFGTNEEKNKAAYEIRLLAKSNIFN-RSCIVESGAIPPLLNLLSSPDQC 434
L R L + + + + + +R LA + + IV++ + ++ LL S Q
Sbjct: 364 AGIIQLLDRYLTYRSKDVRFELLKFLRTLADEETDDGKEMIVKTITMSCVIKLLGSSHQP 423
Query: 435 VQENAVAALLKLSK--HTSGK--------------------------------------- 453
V+ A A LL+LSK H K
Sbjct: 424 VRHAAQALLLELSKSQHACEKIGTARGAILMLVTAKYNRELDSFASETSDQILRNLEKCP 483
Query: 454 ---KVIVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVK-GYRKLIGETPKAIPALV 509
K + ESG L+ +L L G E Q+A A YL + G+ K KA PAL+
Sbjct: 484 ENIKQMAESGLLEPLLGHLAEG--SEETQVAMAA--YLVEIDIGHEKKTYVAEKACPALI 539
Query: 510 KLIEEGTDCGKKNAVVAIFGLLLSQGNHQKVLDAGTVPLL----------ADILASSNRT 559
L++ ++ A A+ + L N++ +++ G + ++ +D++ S N
Sbjct: 540 GLVQSENIDARRAAFKALAHISLYHPNNKILVEVGIIKIMVEEMFTKRVFSDLMNSRN-- 597
Query: 560 ELITDSLAVLANLAE 574
++ +LAN+ E
Sbjct: 598 ----EAATILANILE 608
>sp|Q9LM76|PUB44_ARATH U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44
PE=1 SV=1
Length = 801
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 113/242 (46%), Gaps = 38/242 (15%)
Query: 278 EDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLK-----AGNMLCPKTGEKLTNTELLPN 332
E F CP++ E+M DPVT+ G+T++R +I+KW K CP T ++LT+T++ +
Sbjct: 25 EAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSAS 84
Query: 333 TTLKKLIHQFCADNGISLAKSGRKSRDITRTIIPGSPAAAEAMKLMSRFLARRLFFGTNE 392
L+ I ++ +SR+ +A KL +AR+ F N
Sbjct: 85 IALRNTIEEW-------------RSRN-------------DAAKL---DIARQSLFLGNA 115
Query: 393 EKN--KAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLSSPDQCVQENAVAALLKLSKHT 450
E + +A +R + ++ NR + S I ++++L S V+ A+ L + +
Sbjct: 116 ETDILQALMHVRQICRTIRSNRHGVRNSQLIHMIIDMLKSTSHRVRYKALQTLQVVVEGD 175
Query: 451 SGKKVIVESGG-LKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALV 509
K IV G ++ ++K L S + R+ A + LF L+ + + IG A+ LV
Sbjct: 176 DESKAIVAEGDTVRTLVKFLSHEPS-KGREAAVSLLFELSKSEALCEKIGSIHGALILLV 234
Query: 510 KL 511
L
Sbjct: 235 GL 236
>sp|Q683D5|PUB37_ARATH U-box domain-containing protein 37 OS=Arabidopsis thaliana GN=PUB37
PE=2 SV=1
Length = 400
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 277 PEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLCPKTGEKLTNTELLPNTTLK 336
P+ F CPISLE+M DP + G TY+ +I WL+ G+ P T KL +T+L+PN L+
Sbjct: 326 PQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLALR 385
Query: 337 KLIHQF 342
I ++
Sbjct: 386 SAIQEW 391
>sp|Q9SLX0|IMA1B_ORYSJ Importin subunit alpha-1b OS=Oryza sativa subsp. japonica
GN=Os05g0155500 PE=1 SV=2
Length = 534
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 115/235 (48%), Gaps = 11/235 (4%)
Query: 396 KAAYEIRLLAKSNIFNRSCIVESGAIPPLLNLLSSPDQCVQENAVAALLKLSKHTSG-KK 454
+AA+ + +A N +VESGA+P + LLSSP + V+E AV AL ++ + +
Sbjct: 141 EAAWALTNIASGTSDNTKVVVESGAVPIFVKLLSSPSEDVREQAVWALGNVAGDSPKCRD 200
Query: 455 VIVESGGLKVILKVLKSGLSLEARQIAAATLFYLTSVKGYRKLIGETPKAIPALVKLIEE 514
+++ SGGL +L+ L L + A TL K P A+ AL +LI
Sbjct: 201 LVLASGGLYPLLQQLNEHAKLSMLRNATWTLSNFCRGKPQPNFEQVKP-ALSALQRLIHS 259
Query: 515 GTDCGKKNAVVAIFGLLLSQGNH---QKVLDAGTVPLLADILASSNRTELITDSLAVLAN 571
+ +A A+ LS G + Q V+++G P L ++L + + LI +L + N
Sbjct: 260 QDEEVLTDACWALS--YLSDGTNDKIQAVIESGVFPRLVELLMHPSASVLIP-ALRTVGN 316
Query: 572 L--AEDIQGTSTILKTSALPVIIGLLQTLTSRAGKEYCVSILLSLCSNAREEVTA 624
+ +D+Q T ++ ALP ++ LL ++ K+ + ++ + RE++ A
Sbjct: 317 IVTGDDMQ-TQCVIDHQALPCLLNLLTNNHKKSIKKEACWTISNITAGNREQIQA 370
>sp|Q5FVN8|WSDU1_RAT WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus
norvegicus GN=Wdsub1 PE=2 SV=1
Length = 476
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 258 RSSDQIDVRCNMETLSCLNPEDFRCPISLELMTDPVTVSTGQTYDRSSIQKWLKAGNMLC 317
RS D++ R ME+LS P++F CPI+ ELM DPV S G +Y+R +++ W+
Sbjct: 388 RSIDELRTR--MESLSSGIPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTS 445
Query: 318 PKTGEKLTNTELLPNTTLKKLIHQF 342
P T L + L PN TLK I+++
Sbjct: 446 PMTNLALPSLVLTPNRTLKMAINRW 470
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 230,047,278
Number of Sequences: 539616
Number of extensions: 8963070
Number of successful extensions: 26062
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 25124
Number of HSP's gapped (non-prelim): 576
length of query: 683
length of database: 191,569,459
effective HSP length: 124
effective length of query: 559
effective length of database: 124,657,075
effective search space: 69683304925
effective search space used: 69683304925
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)