BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037124
(110 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LDH3|PT112_ARATH Probable sugar phosphate/phosphate translocator At1g12500
OS=Arabidopsis thaliana GN=At1g12500 PE=2 SV=1
Length = 361
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/120 (62%), Positives = 85/120 (70%), Gaps = 13/120 (10%)
Query: 1 MNLLVYMALMAASIFLPFTLYIEG-------------IFIVYLLLGNATIAYLVILTKFF 47
MNLL+YMA MAA I LPFTLYIEG I++LL GNAT+AYLV LT F
Sbjct: 238 MNLLLYMAPMAACILLPFTLYIEGNVLRVLIEKARTDPLIIFLLAGNATVAYLVNLTNFL 297
Query: 48 VKKHTCTLTLQVLGNAKAALAAVVLVLIFKNPVTVMGMTEFAVTTMIVVLYSKVKKRFKI 107
V KHT LTLQVLGN KAA+AA V VLIF+NPVTVMG+ F VT M VVLYS+ +KR K+
Sbjct: 298 VTKHTSALTLQVLGNGKAAVAAGVSVLIFRNPVTVMGIAGFGVTIMGVVLYSEARKRSKL 357
>sp|Q6DBP3|PT505_ARATH Probable sugar phosphate/phosphate translocator At5g05820
OS=Arabidopsis thaliana GN=At5g05820 PE=2 SV=1
Length = 309
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/119 (52%), Positives = 78/119 (65%), Gaps = 13/119 (10%)
Query: 1 MNLLVYMALMAASIFLPFTLYIE----GI---------FIVYLLLGNATIAYLVILTKFF 47
MNLL+YMA +A + LP TL +E GI IV+ LL N+ +AYLV LT F
Sbjct: 190 MNLLLYMAPIAVVLLLPATLIMEKNVVGITIALARDDFRIVWYLLFNSALAYLVNLTNFL 249
Query: 48 VKKHTCTLTLQVLGNAKAALAAVVLVLIFKNPVTVMGMTEFAVTTMIVVLYSKVKKRFK 106
V HT LTLQVLGNAK A+A VV +LIFKNPV+V GM +++T V+LYS+ KKR K
Sbjct: 250 VTNHTSALTLQVLGNAKGAVAVVVSILIFKNPVSVTGMLGYSLTVCGVILYSEAKKRNK 308
>sp|Q5XF09|PT311_ARATH Probable sugar phosphate/phosphate translocator At3g11320
OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1
Length = 308
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 77/119 (64%), Gaps = 13/119 (10%)
Query: 1 MNLLVYMALMAASIFLPFTLYIE----GI---------FIVYLLLGNATIAYLVILTKFF 47
MNLL+YMA +A LP TL +E GI IV+ LL N+ +AY V LT F
Sbjct: 190 MNLLLYMAPIAVVFLLPATLIMEKNVVGITIALARDDFRIVWYLLFNSALAYFVNLTNFL 249
Query: 48 VKKHTCTLTLQVLGNAKAALAAVVLVLIFKNPVTVMGMTEFAVTTMIVVLYSKVKKRFK 106
V KHT LTLQVLGNAK A+A VV +LIF+NPV+V GM +++T V+LYS+ KKR K
Sbjct: 250 VTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVCGVILYSEAKKRSK 308
>sp|Q9FYE5|PT504_ARATH Probable sugar phosphate/phosphate translocator At5g04160
OS=Arabidopsis thaliana GN=At5g04160 PE=2 SV=1
Length = 309
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 75/119 (63%), Gaps = 13/119 (10%)
Query: 1 MNLLVYMALMAASIFLPFTLYIEGI-------------FIVYLLLGNATIAYLVILTKFF 47
MNL++YM+ +A LP TL++E ++ LLL N+ +AY L F
Sbjct: 191 MNLMLYMSPIAVIALLPVTLFMEPDVISVTLTLAKQHQYMWILLLVNSVMAYSANLLNFL 250
Query: 48 VKKHTCTLTLQVLGNAKAALAAVVLVLIFKNPVTVMGMTEFAVTTMIVVLYSKVKKRFK 106
V KHT LTLQVLGNAK A+A V+ +LIF+NPVTVMG+ +++T + VV Y + K+RF+
Sbjct: 251 VTKHTSALTLQVLGNAKGAVAVVISILIFQNPVTVMGIGGYSITVLGVVAYGETKRRFR 309
>sp|Q9SS40|PT310_ARATH Probable sugar phosphate/phosphate translocator At3g10290
OS=Arabidopsis thaliana GN=At3g10290 PE=3 SV=1
Length = 355
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 75/119 (63%), Gaps = 13/119 (10%)
Query: 1 MNLLVYMALMAASIFLPFTLYIE-GIFIVYLLLG------------NATIAYLVILTKFF 47
MNL++YM+ +A LP T+++E + V L LG N+ +AY L F
Sbjct: 237 MNLMLYMSPIAVIALLPVTIFMEPDVMSVTLTLGRQHKYMYILLLVNSVMAYSANLLNFL 296
Query: 48 VKKHTCTLTLQVLGNAKAALAAVVLVLIFKNPVTVMGMTEFAVTTMIVVLYSKVKKRFK 106
V KHT LTLQVLGNAK A+A V+ +L+F+NPVTVMG+ +++T + VV Y + K+RF+
Sbjct: 297 VTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTVMGIGGYSITVLGVVAYGETKRRFR 355
>sp|Q9C521|UGAL1_ARATH UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1
PE=2 SV=1
Length = 336
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 30 LLLGNATIAYLVILTKFFVKKHTCTLTLQVLGNAKAALAAVVLVLIFKNPVTVMGMTEFA 89
++L + +A+ + + F+V T +T V GN K A+A +V LIF+NP++ M
Sbjct: 228 IILSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVMVSWLIFRNPISYMNAVGCG 287
Query: 90 VTTMIVVLYSKVK 102
+T + Y V+
Sbjct: 288 ITLVGCTFYGYVR 300
>sp|Q9SFE9|GONS5_ARATH GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5
PE=2 SV=1
Length = 341
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 30 LLLGNATIAYLVILTKFFVKKHTCTLTLQVLGNAKAALAAVVLVLIFKNPVTVMGMTEFA 89
+L + +A+ + + F+V + T +T V GN K A+A V +IF+NP++ M
Sbjct: 234 ILFNSGVLAFCLNFSIFYVIQSTTAVTFNVAGNLKVAVAVFVSWMIFRNPISPMNAVGCG 293
Query: 90 VTTMIVVLYSKVK 102
+T + Y V+
Sbjct: 294 ITLVGCTFYGYVR 306
>sp|Q550W6|FUCT1_DICDI GDP-fucose transporter 1 OS=Dictyostelium discoideum GN=slc35c1
PE=3 SV=1
Length = 368
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 11 AASIFLPFTLYIEGIFIVYLLLGNATIAYLVILTKFFVKKHTCTLTLQVLGNAKAALAAV 70
A+ L L G F Y+ + + YL+ ++ F KHT LT + G KA + +
Sbjct: 272 EANTILDEPLLYSGTFWFYMTVA-GLMGYLISISVFMQIKHTSPLTNTISGTVKACVQTI 330
Query: 71 VLVLIFKNPVTVMGMTEFAVTTMIVV 96
+ V+ + NP++ T+ AV ++V+
Sbjct: 331 LAVVFWGNPIS----TQNAVGILLVI 352
>sp|P0CK96|S352B_HUMAN Solute carrier family 35 member E2B OS=Homo sapiens GN=SLC35E2B
PE=2 SV=1
Length = 405
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%)
Query: 27 IVYLLLGNATIAYLVILTKFFVKKHTCTLTLQVLGNAKAALAAVVLVLIFKNPVTVMGMT 86
+V LLL + + +L +T + + +T V K AL+ + V++F N +T +
Sbjct: 296 VVLLLLTDGVLFHLQSVTAYALMGKISPVTFSVASTVKHALSIWLSVIVFGNKITSLSAV 355
Query: 87 EFAVTTMIVVLYSKVKK 103
A+ T+ V+LY+K ++
Sbjct: 356 GTALVTVGVLLYNKARQ 372
>sp|Q6PGC7|S35E3_MOUSE Solute carrier family 35 member E3 OS=Mus musculus GN=Slc35e3 PE=2
SV=1
Length = 313
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 52/94 (55%), Gaps = 12/94 (12%)
Query: 1 MNLLVYMALMAASIFL---PF--TLYIEG-IFIVY------LLLGNATIAYLVILTKFFV 48
M LL Y A M++++ L PF ++ EG IF + ++L + IA++V L+ +++
Sbjct: 185 MQLLYYQAPMSSAMLLVAVPFFEPVFAEGGIFGPWSVSALLMVLLSGIIAFMVNLSIYWI 244
Query: 49 KKHTCTLTLQVLGNAKAALAAVVLVLIFKNPVTV 82
+T +T + G+ K + ++FK+P++V
Sbjct: 245 IGNTSPVTYNMFGHFKFCITLCGGYILFKDPLSV 278
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.334 0.142 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,839,224
Number of Sequences: 539616
Number of extensions: 901694
Number of successful extensions: 4635
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 4605
Number of HSP's gapped (non-prelim): 38
length of query: 110
length of database: 191,569,459
effective HSP length: 78
effective length of query: 32
effective length of database: 149,479,411
effective search space: 4783341152
effective search space used: 4783341152
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 55 (25.8 bits)