BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037127
(307 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 286 bits (732), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 148/304 (48%), Positives = 203/304 (66%), Gaps = 10/304 (3%)
Query: 4 IDGDHDTELLEAQAHVWNHIFNFINSMSLKCAVELSIPDIINKHGKPTTLNDLVSALTIN 63
I+G +E+ +AQA ++ HI+ FI+SMSLK AVE++IP+II HGKP +L++LVS L +
Sbjct: 5 INGRKPSEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVP 64
Query: 64 PSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLTNASKLLLKDSPLSVTPLLQ 123
SK V RLMR L H+GFF T EE+ Y LT AS+LL++ S L + P+++
Sbjct: 65 SSKIGNVRRLMRYLAHNGFFEIIT--------KEEESYALTVASELLVRGSDLCLAPMVE 116
Query: 124 AVLDPILLSPWLKLSTWFQSDDPAPFDMVHGKSFWEYAGDEPKINNFFNEAMASDARLAT 183
VLDP L + +L W +D F + G FW++ P+ N FN+AMASD++L
Sbjct: 117 CVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKL-I 175
Query: 184 RVVIHKCKNVFEGLNSLVDVGGATGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLK 243
+ + C VF+GL S+VDVGG TGT AK I + FP L+C FD P VV L S NL
Sbjct: 176 NLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENL-SGSNNLT 234
Query: 244 YVGGDMFEAIPPADAVVLKWILHDWNDEECVKILKKCKEAITSNSKIGKVIIIDMMRENK 303
YVGGDMF +IP ADAV+LK+ILH+W D++C++ILKKCKEA+T++ K GKV IIDM+ + K
Sbjct: 235 YVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKK 294
Query: 304 KGDD 307
K ++
Sbjct: 295 KDEN 298
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 271 bits (694), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 140/304 (46%), Positives = 198/304 (65%), Gaps = 5/304 (1%)
Query: 4 IDGDHDTELLEAQAHVWNHIFNFINSMSLKCAVELSIPDIINKHGKPTTLNDLVSALTIN 63
I+ +E+ +AQA ++ +++ F++SMSLK ++E++IP+II+ HGKP TL++LVS L I
Sbjct: 5 INNRKPSEIFKAQALLYKNMYAFVDSMSLKWSIEMNIPNIIHNHGKPITLSNLVSILQIP 64
Query: 64 PSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLTNASKLLLKDSPLSVTPLLQ 123
+K V RLMR L H+GFF T N EE+ Y LT AS+LL+K + L + P+++
Sbjct: 65 STKVDNVQRLMRYLAHNGFFEIITNQELEN---EEEAYALTVASELLVKGTELCLAPMVE 121
Query: 124 AVLDPILLSPWLKLSTWFQSDDPAPFDMVHGKSFWEYAGDEPKINNFFNEAMASDARLAT 183
VLDP L + + L W +D F + G WE+ P+ N +N+A+ASD+++
Sbjct: 122 CVLDPTLSTSFHNLKKWVYEEDLTLFAVNLGCDLWEFLNKNPEYNTLYNDALASDSKM-I 180
Query: 184 RVVIHKCKNVFEGLNSLVDVGGATGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLK 243
+ + C VFEGL S+VDVGG GT K I + FP L C FD P VV L NL
Sbjct: 181 NLAMKDCNLVFEGLESIVDVGGGNGTTGKIICETFPKLTCVVFDRPKVVENLCGS-NNLT 239
Query: 244 YVGGDMFEAIPPADAVVLKWILHDWNDEECVKILKKCKEAITSNSKIGKVIIIDMMRENK 303
YVGGDMF ++P ADAV+LK +LHDW D++C+KILKKCKEA+TS+ K GKVI+IDM+ K
Sbjct: 240 YVGGDMFISVPKADAVLLKAVLHDWTDKDCIKILKKCKEAVTSDGKRGKVIVIDMVINEK 299
Query: 304 KGDD 307
K ++
Sbjct: 300 KDEN 303
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 271 bits (692), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 143/304 (47%), Positives = 196/304 (64%), Gaps = 10/304 (3%)
Query: 4 IDGDHDTELLEAQAHVWNHIFNFINSMSLKCAVELSIPDIINKHGKPTTLNDLVSALTIN 63
I+G +E+ +AQA ++ HI+ FI+S SLK AVE +IP+II HGKP +L++LVS L +
Sbjct: 5 INGRKPSEIFKAQALLYKHIYAFIDSXSLKWAVEXNIPNIIQNHGKPISLSNLVSILQVP 64
Query: 64 PSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLTNASKLLLKDSPLSVTPLLQ 123
SK V RL R L H+GFF T EE+ Y LT AS+LL++ S L + P ++
Sbjct: 65 SSKIGNVRRLXRYLAHNGFFEIIT--------KEEESYALTVASELLVRGSDLCLAPXVE 116
Query: 124 AVLDPILLSPWLKLSTWFQSDDPAPFDMVHGKSFWEYAGDEPKINNFFNEAMASDARLAT 183
VLDP L + +L W +D F + G FW++ P+ N FN+A ASD++L
Sbjct: 117 CVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAXASDSKL-I 175
Query: 184 RVVIHKCKNVFEGLNSLVDVGGATGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLK 243
+ + C VF+GL S+VDVGG TGT AK I + FP L+C FD P VV L S NL
Sbjct: 176 NLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENL-SGSNNLT 234
Query: 244 YVGGDMFEAIPPADAVVLKWILHDWNDEECVKILKKCKEAITSNSKIGKVIIIDMMRENK 303
YVGGD F +IP ADAV+LK+ILH+W D++C++ILKKCKEA+T++ K GKV IID + + K
Sbjct: 235 YVGGDXFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDXVIDKK 294
Query: 304 KGDD 307
K ++
Sbjct: 295 KDEN 298
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 256 bits (653), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/296 (46%), Positives = 196/296 (66%), Gaps = 5/296 (1%)
Query: 6 GDHDTELLEAQAHVWNHIFNFINSMSLKCAVELSIPDIINKHGKPTTLNDLVSALTINPS 65
G ++EL AQ H++ H++NF++SM+LK A+EL I D I+ HGKP TL++L S+L ++PS
Sbjct: 1 GSEESELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPS 60
Query: 66 KTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLTNASKLLLKDSPLSVTPLLQAV 125
K ++R +R+L H+GFFA+ + + +EE Y LT SKLL+ P ++ +++
Sbjct: 61 KVNILHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGA 120
Query: 126 LDPILLSPWLKLSTWFQSD-DPAPFDMVHGKSFWEYAG--DEPKINNFFNEAMASDARLA 182
L P L W WF D + F+ G+SFW++ E + F +AMASD+R+
Sbjct: 121 LHPSSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMF 180
Query: 183 TRVVIHKCKNVFEGLNSLVDVGGATGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANL 242
++V+ + K VFEGL SLVDVGG TG V K I + FP+L+CT FD P VV L + NL
Sbjct: 181 -KLVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGN-ENL 238
Query: 243 KYVGGDMFEAIPPADAVVLKWILHDWNDEECVKILKKCKEAITSNSKIGKVIIIDM 298
+VGGDMF++IP ADAV+LKW+LHDWNDE+ +KILK KEAI+ K GKVIIID+
Sbjct: 239 NFVGGDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 294
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 254 bits (648), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 138/293 (47%), Positives = 195/293 (66%), Gaps = 5/293 (1%)
Query: 9 DTELLEAQAHVWNHIFNFINSMSLKCAVELSIPDIINKHGKPTTLNDLVSALTINPSKTR 68
++EL AQ H++ H++NF++SM+LK A+EL I D I+ HGKP TL++L S+L ++PSK
Sbjct: 3 ESELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVN 62
Query: 69 CVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLTNASKLLLKDSPLSVTPLLQAVLDP 128
++R +R+L H+GFFA+ + + +EE Y LT SKLL+ P ++ +++ L P
Sbjct: 63 ILHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHP 122
Query: 129 ILLSPWLKLSTWFQSD-DPAPFDMVHGKSFWEYAG--DEPKINNFFNEAMASDARLATRV 185
L W WF D + F+ G+SFW++ E + F +AMASD+R+ ++
Sbjct: 123 SSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMF-KL 181
Query: 186 VIHKCKNVFEGLNSLVDVGGATGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLKYV 245
V+ + K VFEGL SLVDVGG TG V K I + FP+L+CT FD P VV L + NL +V
Sbjct: 182 VLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGN-ENLNFV 240
Query: 246 GGDMFEAIPPADAVVLKWILHDWNDEECVKILKKCKEAITSNSKIGKVIIIDM 298
GGDMF++IP ADAV+LKW+LHDWNDE+ +KILK KEAI+ K GKVIIID+
Sbjct: 241 GGDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 293
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 253 bits (646), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 138/292 (47%), Positives = 194/292 (66%), Gaps = 5/292 (1%)
Query: 10 TELLEAQAHVWNHIFNFINSMSLKCAVELSIPDIINKHGKPTTLNDLVSALTINPSKTRC 69
+EL AQ H++ H++NF++SM+LK A+EL I D I+ HGKP TL++L S+L ++PSK
Sbjct: 1 SELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNI 60
Query: 70 VYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLTNASKLLLKDSPLSVTPLLQAVLDPI 129
++R +R+L H+GFFA+ + + +EE Y LT SKLL+ P ++ +++ L P
Sbjct: 61 LHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPS 120
Query: 130 LLSPWLKLSTWFQSD-DPAPFDMVHGKSFWEYAG--DEPKINNFFNEAMASDARLATRVV 186
L W WF D + F+ G+SFW++ E + F +AMASD+R+ ++V
Sbjct: 121 SLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMF-KLV 179
Query: 187 IHKCKNVFEGLNSLVDVGGATGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLKYVG 246
+ + K VFEGL SLVDVGG TG V K I + FP+L+CT FD P VV L + NL +VG
Sbjct: 180 LQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGN-ENLNFVG 238
Query: 247 GDMFEAIPPADAVVLKWILHDWNDEECVKILKKCKEAITSNSKIGKVIIIDM 298
GDMF++IP ADAV+LKW+LHDWNDE+ +KILK KEAI+ K GKVIIID+
Sbjct: 239 GDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 290
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 150/272 (55%), Gaps = 12/272 (4%)
Query: 30 MSLKCAVELSIPDIINKHGKPTTLN--DLVSAL-TINPSKTRCVYRLMRILIHSGFFAQQ 86
M LK A+EL + +II K G ++ ++ S L T NP + R++R+L + +
Sbjct: 34 MILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLL--ACYIILT 91
Query: 87 TLNSSRNNNDEEQGYVLTNASKLLLK-DSPLSVTPLLQAVLDPILLSPWLKLSTWFQSDD 145
++ + ++ Y L +K L+K + +S++ L D +L+ W L D
Sbjct: 92 CSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVL-DG 150
Query: 146 PAPFDMVHGKSFWEYAGDEPKINNFFNEAMASDARLATRVVIHKCKNVFEGLNSLVDVGG 205
PF+ +G + +EY G +P+ N FN+ M+ + + + ++ FEGL SLVDVGG
Sbjct: 151 GIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTG-FEGLKSLVDVGG 209
Query: 206 ATGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLKYVGGDMFEAIPPADAVVLKWIL 265
TG V I +P ++ +FDLPHV+ S +++VGGDMF +IP ADAV +KWI
Sbjct: 210 GTGAVINTIVSKYPTIKGINFDLPHVIEDAPS-YPGVEHVGGDMFVSIPKADAVFMKWIC 268
Query: 266 HDWNDEECVKILKKCKEAITSNSKIGKVIIID 297
HDW+DE C+K LK C EA+ N GKVI+ +
Sbjct: 269 HDWSDEHCLKFLKNCYEALPDN---GKVIVAE 297
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 156/277 (56%), Gaps = 17/277 (6%)
Query: 30 MSLKCAVELSIPDIINKHGKPT---TLNDLVSAL-TINPSKTRCVYRLMRILIHSGF--F 83
M+LK A+EL + +I+ K P+ + ++ + L T NP + R++R+L +
Sbjct: 36 MALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTY 95
Query: 84 AQQTLNSSRNNNDEEQGYVLTNASKLLLK-DSPLSVTPLLQAVLDPILLSPWLKLSTWFQ 142
+ L S + E+ Y L K L K + +S+ P L D +LL PW L
Sbjct: 96 TLRELPSGK----VERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWFYLKDAIL 151
Query: 143 SDDPAPFDMVHGKSFWEYAGDEPKINNFFNEAMASDARLATRVVIHKCKNVFEGLNSLVD 202
+ PF+ +G + ++Y G + +IN FN+ M+S++ + + ++ + N FEGL ++VD
Sbjct: 152 -EGGIPFNKAYGMNIFDYHGTDHRINKVFNKGMSSNSTITMKKIL-EMYNGFEGLTTIVD 209
Query: 203 VGGATGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLKYVGGDMFEAIPPADAVVLK 262
VGG TG VA I +P++ +FDLPHV+ + + ++++GGDMF+ +P DA+ +K
Sbjct: 210 VGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPA-FSGVEHLGGDMFDGVPKGDAIFIK 268
Query: 263 WILHDWNDEECVKILKKCKEAITSNSKIGKVIIIDMM 299
WI HDW+DE C+K+LK C A+ + GKVI+ + +
Sbjct: 269 WICHDWSDEHCLKLLKNCYAALPDH---GKVIVAEYI 302
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 144/272 (52%), Gaps = 12/272 (4%)
Query: 30 MSLKCAVELSIPDI-INKHGKPTTLNDLVSAL--TINPSKTRCVYRLMRILIHSGFFAQQ 86
M+LK A+EL + +I + GK T ++ + L NP V R++R+L + +
Sbjct: 35 MTLKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILRLL--ASYNVVT 92
Query: 87 TLNSSRNNNDEEQGYVLTNASKLLL-KDSPLSVTPLLQAVLDPILLSPWLKLSTWFQSDD 145
L + + Y K L + +S+ L D +L+ W L D
Sbjct: 93 CLVEEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVL-DG 151
Query: 146 PAPFDMVHGKSFWEYAGDEPKINNFFNEAMASDARLATRVVIHKCKNVFEGLNSLVDVGG 205
PF+ +G S +EY G +P+ N FNE M + + + T+ ++ + + FEGL +LVDVGG
Sbjct: 152 GIPFNKAYGMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLL-ELYHGFEGLGTLVDVGG 210
Query: 206 ATGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLKYVGGDMFEAIPPADAVVLKWIL 265
G AIA +P ++ +FDLPHV++ + +VGGDMF+ +P D +++KWIL
Sbjct: 211 GVGATVAAIAAHYPTIKGVNFDLPHVIS-EAPQFPGVTHVGGDMFKEVPSGDTILMKWIL 269
Query: 266 HDWNDEECVKILKKCKEAITSNSKIGKVIIID 297
HDW+D+ C +LK C +A+ ++ GKV+++
Sbjct: 270 HDWSDQHCATLLKNCYDALPAH---GKVVLVQ 298
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 144/280 (51%), Gaps = 10/280 (3%)
Query: 25 NFINSMSLKCAVELSIPDIINKHGKPTTL---NDLVSALTINPSKTRCVYRLMRIL-IHS 80
N + L A++L++ +II K P +++ S L + + RL R+L + +
Sbjct: 34 NLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLA 93
Query: 81 GFFAQQTLNSSRNNNDEEQGYVLTNASKLLLKDSPLSVTPLLQAVL-DPILLSPWLKLST 139
+ + + + E+ Y L+ K L+ D L P LL W+
Sbjct: 94 SYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKE 153
Query: 140 WFQSDDPAPFDMVHGKSFWEYAGDEPKINNFFNEAMASDARLATRVVIHKCKNVFEGLNS 199
+D F VHG + +E+ G + K+N FN++M + ++ + FEG+++
Sbjct: 154 AVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRML-EIYTGFEGIST 212
Query: 200 LVDVGGATGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLKYVGGDMFEAIPPADAV 259
LVDVGG +G + I +P ++ +FDLP V+ L+ +++VGGDMF ++P DA+
Sbjct: 213 LVDVGGGSGRNLELIISKYPLIKGINFDLPQVIEN-APPLSGIEHVGGDMFASVPQGDAM 271
Query: 260 VLKWILHDWNDEECVKILKKCKEAITSNSKIGKVIIIDMM 299
+LK + H+W+DE+C++ L C +A++ N GKVII++ +
Sbjct: 272 ILKAVCHNWSDEKCIEFLSNCHKALSPN---GKVIIVEFI 308
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 6/203 (2%)
Query: 98 EQGYVLTNASKLLLKDSPLSVTPLLQAVL-DPILLSPWLKLSTWFQSDDPAPFDMVHGKS 156
E+ Y L+ K L+ D L P LL W +D F VHG +
Sbjct: 111 ERVYGLSXVGKYLVPDESRGYLASFTTFLCYPALLQVWXNFKEAVVDEDIDLFKNVHGVT 170
Query: 157 FWEYAGDEPKINNFFNEAMASDARLATRVVIHKCKNVFEGLNSLVDVGGATGTVAKAIAK 216
+E+ G + K N FN++ + + + FEG+++LVDVGG +G + I
Sbjct: 171 KYEFXGKDKKXNQIFNKSXVDVCATEXKRXL-EIYTGFEGISTLVDVGGGSGRNLELIIS 229
Query: 217 AFPNLECTDFDLPHVVNGLESDLANLKYVGGDMFEAIPPADAVVLKWILHDWNDEECVKI 276
+P ++ +FDLP V+ L+ +++VGGD F ++P DA +LK + H+W+DE+C++
Sbjct: 230 KYPLIKGINFDLPQVIEN-APPLSGIEHVGGDXFASVPQGDAXILKAVCHNWSDEKCIEF 288
Query: 277 LKKCKEAITSNSKIGKVIIIDMM 299
L C +A++ N GKVII++ +
Sbjct: 289 LSNCHKALSPN---GKVIIVEFI 308
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 129/296 (43%), Gaps = 53/296 (17%)
Query: 28 NSMSLKCAVELSIPDIINKHGKPTTLNDLVSALTINPSKTR------CVYRLMRILIHSG 81
+ ++ AVEL +P+++ + P T L A + R + L H
Sbjct: 51 KARAIHVAVELGVPELLQE--GPRTATALAEATGAHEQTLRRLLRLLATVGVFDDLGHDD 108
Query: 82 FFAQQTLNSSRNNNDEEQGYVLTNASKLLLKD--SPLSVTPLLQAVLDPILLSPWLKLST 139
FAQ L S +LL D SP++ QA P W +L+
Sbjct: 109 LFAQNAL------------------SAVLLPDPASPVATDARFQAA--PWHWRAWEQLTH 148
Query: 140 WFQSDDPAPFDMVHGKSFWEYAGDEPKINNFFNEAMASDARLATRVVIHKCKNV-----F 194
++ + A FD+ +G SFW+ ++PK FN A S V + + V F
Sbjct: 149 SVRTGE-ASFDVANGTSFWQLTHEDPKARELFNRAXGS-------VSLTEAGQVAAAYDF 200
Query: 195 EGLNSLVDVGGATGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLAN------LKYVGGD 248
G + VD+GG G++ A+ AFP L T + P V L + + GD
Sbjct: 201 SGAATAVDIGGGRGSLXAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGD 260
Query: 249 MFEAIP-PADAVVLKWILHDWNDEECVKILKKCKEAITSNSKIGKVIIIDMMRENK 303
FE IP AD ++K +LHDW+D++ V+IL++ A +S++ ++ID + + +
Sbjct: 261 FFETIPDGADVYLIKHVLHDWDDDDVVRILRRIATAXKPDSRL---LVIDNLIDER 313
>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
Length = 348
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 101 YVLTNASKLLLKDSPLSVTPLLQAVLDPILLSPWLKLSTWFQSDDPAPFDMVHGKSFWEY 160
+ LT+ L DSP+ + D + ++++ + PA F + G S Y
Sbjct: 92 FALTDKGAALRSDSPVPARAGILXFTDTXFWTXSHRVASALGPERPA-FADIFGSSLDAY 150
Query: 161 AGDEPKINNFFNEAMASDARLATRVVIHKCKNVFEGLNSLVDVGGATGTVAKAIAKAFPN 220
+ ++ + E + A +++ + + F ++ DVGG G + + P
Sbjct: 151 FDGDAEVEALYYEGXET-VSAAEHLILARAGD-FPATGTVADVGGGRGGFLLTVLREHPG 208
Query: 221 LECTDFDLPHVVNGLESDLANL----KYVGGDMFEAIPPADAVVLKWILHDWNDEECVKI 276
L+ D VV D ++ K V GD +P AD VLK ILH+W DE+ V+I
Sbjct: 209 LQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRILHNWGDEDSVRI 268
Query: 277 LKKCKEAITSNSKIGKVIIIDMM 299
L C+ ++ G+V++ID +
Sbjct: 269 LTNCRRVXPAH---GRVLVIDAV 288
>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
Length = 334
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 113/264 (42%), Gaps = 44/264 (16%)
Query: 66 KTRCVYRLMRI----LIHSGFFAQQTLNSSRNNN-------------------DEEQGYV 102
K+RCVY R+ LI SG + +TL ++ ++ D GY
Sbjct: 21 KSRCVYVATRLGLADLIESGIDSDETLAAAVGSDAERIHRLMRLLVAFEIFQGDTRDGYA 80
Query: 103 LTNASKLLLKDSPLSVTPLLQAVLDPILLSPWLKLSTWFQSDDPAPFDMVHGKSFWEYAG 162
T S LL +D S ++ + + W S P F++ G+ F+ Y
Sbjct: 81 NTPTSHLL-RDVEGSFRDMVLFYGEE-FHAAWTPACEALLSGTPG-FELAFGEDFYSYLK 137
Query: 163 DEPKINNFFNEAMASDARLATRVVIHKCKNV--FEGLNSLVDVGGATGTVAKAIAKAFPN 220
P F AM A+ + H+ + F G S VDVGG +G + KAI +A P+
Sbjct: 138 RCPDAGRRFLLAMK-----ASNLAFHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPS 191
Query: 221 LECTDFDLPHVVNGLESDLANL------KYVGGDMFEAIPP-ADAVVLKWILHDWNDEEC 273
D + +L++L VGGDM + +P D +L I+ D ++
Sbjct: 192 ARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLDEAAS 251
Query: 274 VKILKKCKEAITSNSKIGKVIIID 297
+++L C+EA+ + G+V++I+
Sbjct: 252 LRLLGNCREAMAGD---GRVVVIE 272
>pdb|1X19|A Chain A, Crystal Structure Of Bchu Involved In Bacteriochlorophyll
C Biosynthesis
pdb|1X1A|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Methionine
pdb|1X1B|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine
pdb|1X1C|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn2+
pdb|1X1D|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn-Bacteriopheophorbide D
Length = 359
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 80/139 (57%), Gaps = 12/139 (8%)
Query: 168 NNFFNEAMASDARLATRVVIHKCKNVFEGLNSLVDVGGATGTVAKAIAKAFPNLECTDFD 227
N +F E S+A+ A ++++ + K +G+ ++DVGG G ++ A+ K FP L+ T +
Sbjct: 164 NLYFEEIHRSNAKFAIQLLLEEAK--LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILN 221
Query: 228 LPHVV-----NGLESDLAN-LKYVGGDMF-EAIPPADAVVLKWILHDWNDEECVKILKKC 280
LP + N E +A+ ++ + D++ E+ P ADAV+ IL+ N++ + KK
Sbjct: 222 LPGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRILYSANEQLSTIMCKKA 281
Query: 281 KEAITSNSKIGKVIIIDMM 299
+A+ S G+++I+DM+
Sbjct: 282 FDAMRSG---GRLLILDMV 297
>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
Length = 360
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 29/238 (12%)
Query: 65 SKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLTNASKLLLKDSPLSVTP---L 121
++ + RL+R L+ G D +V T +LL D P + L
Sbjct: 64 TRPEALLRLIRHLVAIGLL----------EEDAPGEFVPTEVGELLADDHPAAQRAWHDL 113
Query: 122 LQAVLDPILLSPWLKLSTWFQSDDPAPFDMVHGKSFWEYAGDEPKINNFFNEAMASDARL 181
QAV + + +L ++ P ++ ++GK F+E P + F+ +A D +
Sbjct: 114 TQAVARADI--SFTRLPDAIRTGRPT-YESIYGKPFYEDLAGRPDLRASFDSLLACDQDV 170
Query: 182 A--TRVVIHKCKNVFEGLNSLVDVGGATGTVAKAIAKAFPNLECTDFDLPHVVNGLESDL 239
A + NV ++DVGG G A AIA+ P++ T ++ V+ S L
Sbjct: 171 AFDAPAAAYDWTNV----RHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYL 226
Query: 240 AN------LKYVGGDMFEAIP-PADAVVLKWILHDWNDEECVKILKKCKEAITSNSKI 290
+ + V GD FE +P ADA++L ++L +W D + V+IL +C EA+ +I
Sbjct: 227 KDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRI 284
>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Methionine (Sam)
pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Homocystein (Sah)
Length = 374
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 153 HGKSFWEYAGDEPKINNFFNEAMASDARLATRVVIHKCKNVFEGLNSLVDVGGATGTVAK 212
+G+ FWE + + + F+ M+ D LA + + ++DVGG G +
Sbjct: 141 YGRPFWEDLSADVALADSFDALMSCDEDLAYEAPADAYD--WSAVRHVLDVGGGNGGMLA 198
Query: 213 AIAKAFPNLECTDFDLPHVVNGLESDLAN------LKYVGGDMFEAIP-PADAVVLKWIL 265
AIA P+L T +L A+ + GD F+ +P AD V+L ++L
Sbjct: 199 AIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVL 258
Query: 266 HDWNDEECVKILKKCKEAITSNSKIGKVIIIDMMRENKKGD 306
+W+DE+ + IL+ C A+ G+++++D R + +GD
Sbjct: 259 LNWSDEDALTILRGCVRALEPG---GRLLVLD--RADVEGD 294
>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam
pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam And
N-Acetylserotonin
Length = 353
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 200 LVDVGGATGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLA-----NLKYVGGDMF-EAI 253
+ D+GG G +AK +P + T FD+P VV + + + + GD F + +
Sbjct: 183 MCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL 242
Query: 254 PPADAVVLKWILHDWNDEECVKILKKCKEAITSNSKIGKVIIIDMMRENKKG 305
P AD +L +LHDW D +C +L++ T G ++I ++ E+++G
Sbjct: 243 PEADLYILARVLHDWADGKCSHLLERIYH--TCKPGGGILVIESLLDEDRRG 292
>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDS|B Chain B, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDU|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With Sinefungin (Sfg)
Length = 374
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 153 HGKSFWEYAGDEPKINNFFNEAMASDARLATRVVIHKCKNVFEGLNSLVDVGGATGTVAK 212
+G+ FWE + + + F+ + D LA + + ++DVGG G
Sbjct: 141 YGRPFWEDLSADVALADSFDALXSCDEDLAYEAPADAYD--WSAVRHVLDVGGGNGGXLA 198
Query: 213 AIAKAFPNLECTDFDLPHVVNGLESDLAN------LKYVGGDMFEAIP-PADAVVLKWIL 265
AIA P+L T +L A+ + GD F+ +P AD V+L ++L
Sbjct: 199 AIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVL 258
Query: 266 HDWNDEECVKILKKCKEAITSNSKIGKVIIIDMMRENKKGD 306
+W+DE+ + IL+ C A+ G+++++D R + +GD
Sbjct: 259 LNWSDEDALTILRGCVRALEPG---GRLLVLD--RADVEGD 294
>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
Length = 332
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 13/171 (7%)
Query: 134 WLKLSTWFQSDDPAPFDMVHGKSFWEYAGDEPKINNFFNEAMASDARLATRVVIHKCKNV 193
+++L+ ++ PA + + +G SFWE G +P ++ F+ M+ L + K
Sbjct: 110 FVELAHSIRTGQPA-YPVRYGTSFWEDLGSDPVLSASFDTLMSHHLELDYTGI--AAKYD 166
Query: 194 FEGLNSLVDVGGATGTVAKAIAKAFPNLECTDFDLPHVVNG-----LESDLAN-LKYVGG 247
+ L +VDVGG +G + A+ A +L T DL + L++ L+ + V G
Sbjct: 167 WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVG 226
Query: 248 DMFEAIPP-ADAVVLKWILHDWNDEECVKILKKCKEAITSNSKIGKVIIID 297
F+ +P A VL +LHDW+D V IL++C EA S G V++I+
Sbjct: 227 SFFDPLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSG---GVVLVIE 274
>pdb|3DP7|A Chain A, Crystal Structure Of Sam-Dependent Methyltransferase From
Bacteroides Vulgatus Atcc 8482
pdb|3DP7|B Chain B, Crystal Structure Of Sam-Dependent Methyltransferase From
Bacteroides Vulgatus Atcc 8482
Length = 363
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 200 LVDVGGATGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLKYV------GGDMFEAI 253
L+D+GG TG A + +E T DLP + + A L G ++ +
Sbjct: 183 LLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRD 242
Query: 254 PP----ADAVVLKWILHDWNDEECVKILKKCKEAITSNSKI 290
P DAV + L +++EE + IL + ++I +SK+
Sbjct: 243 VPFPTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKV 283
>pdb|2R3S|A Chain A, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
pdb|2R3S|B Chain B, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
Length = 335
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
Query: 200 LVDVGGATGTVAKAIAKAFPNLECTDFDLPHVVN------GLESDLANLKYVGGDMFEAI 253
++D+ + G A+A+ PN E D V+ ++ + + G FE
Sbjct: 169 VLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVD 228
Query: 254 PP--ADAVVLKWILHDWNDEECVKILKKCKEAITSNSKIGKVIIIDMM 299
D V+L LH ++ C ++L+K K A+ GKVI+ D +
Sbjct: 229 YGNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVE---GKVIVFDFI 273
>pdb|1XTP|A Chain A, Structural Analysis Of Leishmania Major Lmaj004091aaa, A
Sam-dependent Methyltransferase Of The Duf858/pfam05891
Family
Length = 254
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 10/103 (9%)
Query: 196 GLNSLVDVGGATGTVAKAIAKAFPNLECTDFDLP--HVVNGLESDLANL---KYVGGDMF 250
G + +D G G + K + TD P H + + +LA K++
Sbjct: 93 GTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHXLEEAKRELAGXPVGKFILASXE 150
Query: 251 EA-IPP--ADAVVLKWILHDWNDEECVKILKKCKEAITSNSKI 290
A +PP D +V++W D + VK K C++A+T N I
Sbjct: 151 TATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYI 193
>pdb|4GF0|A Chain A, Crystal Structure Of Glutahtione Transferase Homolog From
Sulfitobacter, Target Efi-501084, With Bound Glutathione
pdb|4GF0|B Chain B, Crystal Structure Of Glutahtione Transferase Homolog From
Sulfitobacter, Target Efi-501084, With Bound Glutathione
Length = 215
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 8/80 (10%)
Query: 223 CTDFDLPHVVNGLESDLANLKYVGGDMFEAIPPADAVVLKWILHDWNDEECVKILKKCKE 282
C DF +ESD+ YV G+ F P VV W+ D D + +
Sbjct: 140 CADF--------VESDILRGPYVLGEDFSLADPYLFVVCNWLDGDGVDTAAYPKITTFMQ 191
Query: 283 AITSNSKIGKVIIIDMMREN 302
+T+ + + V M+ EN
Sbjct: 192 QMTARASVAAVKDKGMLAEN 211
>pdb|3I9F|A Chain A, Crystal Structure Of A Putative Type 11 Methyltransferase
From Sulfolobus Solfataricus
pdb|3I9F|B Chain B, Crystal Structure Of A Putative Type 11 Methyltransferase
From Sulfolobus Solfataricus
Length = 170
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 192 NVFEGLNS-LVDVGGATGTVAKAIAKAFPNLECTDFD---LPHVVNGLES--DLANLKYV 245
N+FEG +VD G G K + + L C D + L V +S L++ K +
Sbjct: 12 NIFEGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKFDSVITLSDPKEI 71
Query: 246 GGDMFEAIPPADAVVLKWILHDWNDEECVKILKKCKEAITSNSKIGKVIIIDMMREN 302
+ + I A++ HD +D++ ++ + K + + G+VIIID +EN
Sbjct: 72 PDNSVDFILFANS------FHDMDDKQ--HVISEVKRILKDD---GRVIIIDWRKEN 117
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,182,608
Number of Sequences: 62578
Number of extensions: 366099
Number of successful extensions: 828
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 770
Number of HSP's gapped (non-prelim): 28
length of query: 307
length of database: 14,973,337
effective HSP length: 99
effective length of query: 208
effective length of database: 8,778,115
effective search space: 1825847920
effective search space used: 1825847920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)