Query 037129
Match_columns 227
No_of_seqs 149 out of 2535
Neff 11.2
Searched_HMMs 29240
Date Mon Mar 25 15:04:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037129.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037129hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 1.7E-37 6E-42 216.3 16.3 160 26-210 6-165 (169)
2 1yyh_A HN1;, notch 1, ankyrin 100.0 2.2E-37 7.4E-42 230.0 17.3 181 22-226 55-235 (253)
3 2f8y_A Notch homolog 1, transl 100.0 1.1E-36 3.7E-41 222.0 18.5 181 22-226 23-203 (223)
4 1oy3_D Transcription factor in 100.0 3.7E-37 1.3E-41 231.8 16.5 198 23-226 8-237 (282)
5 3aji_A 26S proteasome non-ATPa 100.0 2.3E-37 7.9E-42 226.7 14.7 179 23-226 39-217 (231)
6 2rfa_A Transient receptor pote 100.0 2.7E-36 9.1E-41 221.2 19.0 195 24-226 3-209 (232)
7 3ljn_A Hypothetical protein; a 100.0 7.5E-37 2.6E-41 238.4 15.7 212 6-226 3-256 (364)
8 2xai_A ASB-9, ankyrin repeat a 100.0 2.5E-36 8.4E-41 225.3 17.6 192 25-225 4-210 (261)
9 4b93_B Ankyrin repeat domain-c 100.0 3.1E-37 1E-41 230.8 11.8 178 24-226 52-230 (269)
10 3hra_A Ankyrin repeat family p 100.0 1.2E-35 4.1E-40 213.1 18.3 180 23-226 4-190 (201)
11 1k1a_A B-cell lymphoma 3-encod 100.0 2.3E-36 7.9E-41 222.6 14.6 193 27-226 12-228 (241)
12 3b7b_A Euchromatic histone-lys 100.0 1.3E-35 4.3E-40 218.3 18.0 196 24-226 11-222 (237)
13 1k1a_A B-cell lymphoma 3-encod 100.0 2.8E-35 9.6E-40 216.8 19.5 173 52-226 4-195 (241)
14 1yyh_A HN1;, notch 1, ankyrin 100.0 3.6E-36 1.2E-40 223.4 14.7 185 16-226 3-202 (253)
15 3b7b_A Euchromatic histone-lys 100.0 7.5E-36 2.6E-40 219.5 16.2 173 24-202 44-231 (237)
16 3d9h_A CDNA FLJ77766, highly s 100.0 3E-35 1E-39 222.0 19.0 194 22-224 57-265 (285)
17 2dzn_A Probable 26S proteasome 100.0 2.7E-35 9.3E-40 215.2 18.2 179 24-224 36-218 (228)
18 1s70_B 130 kDa myosin-binding 100.0 6.5E-36 2.2E-40 227.0 15.1 195 23-224 39-275 (299)
19 2etb_A Transient receptor pote 100.0 1.4E-35 4.9E-40 220.5 15.9 195 24-226 2-233 (256)
20 1oy3_D Transcription factor in 100.0 1.1E-35 3.9E-40 223.7 15.5 181 23-224 44-268 (282)
21 3aji_A 26S proteasome non-ATPa 100.0 6.2E-35 2.1E-39 213.8 18.4 178 24-226 6-184 (231)
22 2xai_A ASB-9, ankyrin repeat a 100.0 1.7E-35 5.9E-40 220.7 15.0 192 24-225 36-249 (261)
23 3kea_A K1L; tropism, ANK repea 100.0 1.5E-35 5E-40 223.8 14.3 175 24-226 31-207 (285)
24 2dzn_A Probable 26S proteasome 100.0 2.4E-35 8.1E-40 215.5 14.5 179 25-226 3-186 (228)
25 2fo1_E LIN-12 protein; beta-ba 100.0 1E-34 3.6E-39 226.9 17.3 202 18-226 119-358 (373)
26 1ikn_D Protein (I-kappa-B-alph 100.0 6.2E-36 2.1E-40 219.9 9.4 185 23-226 7-196 (236)
27 3utm_A Tankyrase-1; tankyrase, 100.0 1.2E-34 4.1E-39 224.4 16.9 96 24-125 58-153 (351)
28 3jxi_A Vanilloid receptor-rela 100.0 9.8E-35 3.3E-39 216.4 15.7 196 24-226 5-237 (260)
29 3d9h_A CDNA FLJ77766, highly s 100.0 8.5E-35 2.9E-39 219.6 15.1 176 24-209 92-282 (285)
30 4b93_B Ankyrin repeat domain-c 100.0 1E-34 3.5E-39 217.1 14.7 177 25-226 12-197 (269)
31 2pnn_A Transient receptor pote 100.0 1.4E-34 4.8E-39 217.1 15.2 198 22-226 11-245 (273)
32 1wdy_A 2-5A-dependent ribonucl 100.0 9.1E-34 3.1E-38 213.4 19.1 199 21-226 36-265 (285)
33 1n11_A Ankyrin; clathrin, BAND 100.0 7.6E-34 2.6E-38 226.4 19.5 201 18-226 9-224 (437)
34 1n11_A Ankyrin; clathrin, BAND 100.0 5.4E-34 1.9E-38 227.2 18.2 196 24-226 179-389 (437)
35 1ihb_A P18-INK4C(INK6), cyclin 100.0 4.1E-34 1.4E-38 198.4 14.7 159 23-206 4-162 (162)
36 3utm_A Tankyrase-1; tankyrase, 100.0 1.9E-33 6.4E-38 217.7 18.6 197 23-226 23-292 (351)
37 4g8k_A 2-5A-dependent ribonucl 100.0 1.4E-33 4.8E-38 217.7 17.4 194 22-226 23-285 (337)
38 1wdy_A 2-5A-dependent ribonucl 100.0 6.2E-33 2.1E-37 208.8 19.3 196 24-226 5-231 (285)
39 1sw6_A Regulatory protein SWI6 100.0 5.3E-34 1.8E-38 219.2 13.5 190 22-225 129-327 (327)
40 3v30_A DNA-binding protein rfx 100.0 6.7E-34 2.3E-38 199.3 12.6 168 25-217 3-171 (172)
41 4gpm_A Engineered protein OR26 100.0 3.8E-33 1.3E-37 194.4 15.8 143 59-226 6-148 (169)
42 3eu9_A Huntingtin-interacting 100.0 7.3E-33 2.5E-37 203.6 17.0 176 27-226 45-222 (240)
43 2f8y_A Notch homolog 1, transl 100.0 4.6E-33 1.6E-37 202.8 14.4 169 34-226 1-170 (223)
44 4hbd_A KN motif and ankyrin re 100.0 1.3E-33 4.3E-38 212.2 11.4 176 26-226 78-262 (276)
45 2rfm_A Putative ankyrin repeat 100.0 3.1E-32 1.1E-36 194.1 17.8 150 52-226 30-179 (192)
46 2y1l_E Darpin-8.4; hydrolase-i 100.0 2E-32 6.9E-37 191.2 16.1 158 22-204 12-169 (169)
47 3eu9_A Huntingtin-interacting 100.0 3.9E-32 1.3E-36 199.7 16.4 176 26-226 11-189 (240)
48 1ikn_D Protein (I-kappa-B-alph 100.0 1.3E-32 4.3E-37 202.2 13.4 178 24-222 45-227 (236)
49 2rfm_A Putative ankyrin repeat 100.0 1.9E-32 6.5E-37 195.2 14.0 157 23-204 34-190 (192)
50 3v31_A Ankyrin repeat family A 100.0 2.1E-32 7.1E-37 190.7 13.5 160 24-208 3-162 (167)
51 2fo1_E LIN-12 protein; beta-ba 100.0 2.9E-32 9.8E-37 213.1 14.5 214 7-226 78-325 (373)
52 4g8k_A 2-5A-dependent ribonucl 100.0 1.7E-31 5.9E-36 206.0 18.0 201 18-226 53-313 (337)
53 3v31_A Ankyrin repeat family A 100.0 3.1E-31 1.1E-35 184.8 16.3 146 56-226 2-147 (167)
54 3f6q_A Integrin-linked protein 100.0 7.3E-32 2.5E-36 190.1 12.8 165 25-214 6-171 (179)
55 2rfa_A Transient receptor pote 100.0 2.8E-31 9.7E-36 194.5 14.8 165 24-212 37-228 (232)
56 3hra_A Ankyrin repeat family p 100.0 7.6E-31 2.6E-35 188.1 16.3 157 24-204 39-201 (201)
57 1awc_B Protein (GA binding pro 100.0 6.4E-31 2.2E-35 180.6 14.6 150 25-200 3-152 (153)
58 3ljn_A Hypothetical protein; a 100.0 6.8E-32 2.3E-36 210.4 10.3 153 53-225 134-300 (364)
59 2pnn_A Transient receptor pote 100.0 2.1E-31 7.2E-36 199.8 12.1 173 22-218 52-271 (273)
60 3kea_A K1L; tropism, ANK repea 100.0 1.8E-31 6.1E-36 201.4 11.4 164 23-212 61-226 (285)
61 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.4E-30 4.9E-35 181.8 14.6 148 54-226 11-158 (169)
62 3twr_A Tankyrase-2; ankyrin re 100.0 6.9E-31 2.4E-35 182.7 12.6 156 24-205 8-164 (165)
63 1awc_B Protein (GA binding pro 100.0 1.7E-30 5.8E-35 178.5 14.3 144 57-226 2-145 (153)
64 3v30_A DNA-binding protein rfx 100.0 3.8E-30 1.3E-34 180.1 16.1 146 57-226 2-147 (172)
65 2vge_A RELA-associated inhibit 100.0 2.9E-34 9.9E-39 209.9 -5.4 177 22-226 19-200 (229)
66 4hbd_A KN motif and ankyrin re 100.0 6.1E-30 2.1E-34 192.1 15.9 157 23-204 110-273 (276)
67 1ycs_B 53BP2, P53BP2; ankyrin 100.0 3.8E-32 1.3E-36 200.1 3.5 177 23-225 4-192 (239)
68 2etb_A Transient receptor pote 100.0 1.4E-30 5E-35 193.5 11.6 164 22-209 41-249 (256)
69 1bd8_A P19INK4D CDK4/6 inhibit 100.0 2.9E-29 9.8E-34 172.9 15.8 152 25-203 3-155 (156)
70 1ihb_A P18-INK4C(INK6), cyclin 100.0 4.5E-30 1.5E-34 178.0 11.4 145 56-226 4-149 (162)
71 1s70_B 130 kDa myosin-binding 100.0 1.4E-29 4.7E-34 192.2 15.1 173 30-226 4-244 (299)
72 3f6q_A Integrin-linked protein 100.0 8E-30 2.7E-34 179.6 12.2 148 55-226 3-150 (179)
73 3twr_A Tankyrase-2; ankyrin re 100.0 3.7E-30 1.3E-34 179.0 9.6 147 53-223 4-150 (165)
74 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.7E-29 5.9E-34 174.0 12.8 144 57-226 2-145 (156)
75 3jxi_A Vanilloid receptor-rela 100.0 6.1E-30 2.1E-34 190.5 11.2 164 22-209 44-253 (260)
76 1d9s_A Cyclin-dependent kinase 100.0 5.8E-29 2E-33 167.5 10.1 133 48-206 3-136 (136)
77 2vge_A RELA-associated inhibit 100.0 6.5E-30 2.2E-34 186.8 5.1 158 40-221 1-163 (229)
78 1bi7_B P16INK4A, MTS1, multipl 100.0 3.5E-29 1.2E-33 172.5 8.1 144 52-221 7-151 (156)
79 1sw6_A Regulatory protein SWI6 100.0 5.5E-29 1.9E-33 191.3 9.6 167 28-226 101-295 (327)
80 3t8k_A Uncharacterized protein 100.0 1.6E-29 5.3E-34 178.9 5.4 159 26-211 8-184 (186)
81 1ycs_B 53BP2, P53BP2; ankyrin 100.0 3.5E-28 1.2E-32 178.9 9.7 146 55-226 3-151 (239)
82 1bi7_B P16INK4A, MTS1, multipl 99.9 1.3E-27 4.4E-32 164.6 10.2 142 21-188 9-151 (156)
83 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.6E-26 5.3E-31 153.3 13.8 126 56-206 1-126 (126)
84 1d9s_A Cyclin-dependent kinase 99.9 4.8E-27 1.6E-31 158.1 11.2 125 23-172 11-136 (136)
85 3t8k_A Uncharacterized protein 99.9 1.5E-27 5.1E-32 168.7 7.8 143 57-226 6-166 (186)
86 2jab_A H10-2-G3; HER2, darpin, 99.9 1.8E-26 6.1E-31 155.3 10.9 124 56-204 13-136 (136)
87 2jab_A H10-2-G3; HER2, darpin, 99.9 1.3E-26 4.5E-31 155.9 10.1 127 20-170 10-136 (136)
88 3c5r_A BARD-1, BRCA1-associate 99.9 2.6E-26 8.9E-31 154.7 9.9 126 52-202 5-130 (137)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.2E-25 3.9E-30 149.1 11.7 125 24-172 2-126 (126)
90 3c5r_A BARD-1, BRCA1-associate 99.9 1.1E-26 3.9E-31 156.4 6.3 116 91-225 5-120 (137)
91 3aaa_C Myotrophin, protein V-1 99.9 3.2E-25 1.1E-29 146.6 10.7 114 93-225 4-117 (123)
92 2b0o_E UPLC1; arfgap, structur 99.9 1.4E-25 4.8E-30 170.1 9.1 139 57-226 151-298 (301)
93 2b0o_E UPLC1; arfgap, structur 99.9 1.5E-25 5.3E-30 169.9 8.9 139 25-194 152-299 (301)
94 3deo_A Signal recognition part 99.9 5.5E-25 1.9E-29 155.4 10.4 139 22-203 42-181 (183)
95 2aja_A Ankyrin repeat family p 99.9 2.1E-28 7.1E-33 190.4 -8.1 156 25-211 93-255 (376)
96 3ui2_A Signal recognition part 99.9 6.6E-25 2.3E-29 161.8 10.6 141 22-205 43-184 (244)
97 2aja_A Ankyrin repeat family p 99.9 1.2E-26 4.2E-31 180.4 -1.1 168 27-227 68-238 (376)
98 3deo_A Signal recognition part 99.9 1.7E-24 5.7E-29 152.9 9.6 115 93-226 41-155 (183)
99 3ehr_A Osteoclast-stimulating 99.9 3E-25 1E-29 161.4 6.0 136 54-214 70-206 (222)
100 3ehr_A Osteoclast-stimulating 99.9 2.4E-24 8.2E-29 156.6 9.4 117 91-226 68-185 (222)
101 3ui2_A Signal recognition part 99.9 4E-25 1.4E-29 163.0 4.9 109 56-190 44-153 (244)
102 3aaa_C Myotrophin, protein V-1 99.9 3.4E-24 1.2E-28 141.6 7.1 109 56-189 6-114 (123)
103 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.1E-22 3.9E-27 127.5 11.5 93 95-206 1-93 (93)
104 3lvq_E ARF-GAP with SH3 domain 99.9 3.6E-23 1.2E-27 167.2 11.6 127 26-174 134-267 (497)
105 2l6b_A NR1C; ankyrin, consensu 99.9 3.3E-23 1.1E-27 135.2 8.7 109 91-218 4-112 (115)
106 3lvq_E ARF-GAP with SH3 domain 99.9 8.9E-23 3E-27 164.9 12.6 131 57-212 132-271 (497)
107 3jue_A Arfgap with coiled-coil 99.9 5.4E-23 1.8E-27 159.4 10.5 141 26-190 201-346 (368)
108 3jue_A Arfgap with coiled-coil 99.9 9.4E-23 3.2E-27 158.1 11.2 144 54-222 196-345 (368)
109 1dcq_A PYK2-associated protein 99.9 3.2E-22 1.1E-26 150.1 12.0 123 26-172 132-263 (278)
110 1dcq_A PYK2-associated protein 99.9 1.2E-21 4.1E-26 146.9 12.8 129 58-207 131-264 (278)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.1E-21 3.9E-26 122.9 9.1 91 57-171 2-92 (93)
112 2l6b_A NR1C; ankyrin, consensu 99.8 3.5E-21 1.2E-25 125.5 5.4 108 52-184 4-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 6.5E-19 2.2E-23 113.7 9.1 91 91-200 19-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 2E-18 6.9E-23 111.4 9.2 84 142-226 19-102 (110)
115 1gp8_A Protein (scaffolding pr 74.5 1.2 3.9E-05 21.6 0.9 24 22-45 11-34 (40)
116 4g26_A Pentatricopeptide repea 46.4 11 0.00038 30.3 2.4 91 20-117 104-199 (501)
117 4g26_A Pentatricopeptide repea 45.5 11 0.00037 30.4 2.2 72 38-116 91-163 (501)
118 3zrh_A Ubiquitin thioesterase 37.4 1E+02 0.0036 24.1 6.3 65 30-119 28-92 (454)
119 3zrh_A Ubiquitin thioesterase 26.0 2.1E+02 0.0073 22.5 6.3 48 155-202 30-90 (454)
120 3mkq_B Coatomer subunit alpha; 21.5 1.9E+02 0.0067 19.5 6.2 134 25-206 9-144 (177)
121 3gvo_A Pumilio 2, pumilio homo 20.1 70 0.0024 24.2 2.8 100 7-110 20-123 (351)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.7e-37 Score=216.30 Aligned_cols=160 Identities=23% Similarity=0.335 Sum_probs=145.5
Q ss_pred HHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHH
Q 037129 26 PIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAK 105 (227)
Q Consensus 26 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~ 105 (227)
..|+.||..|+.++|+.|++.|.|++..|..|.||||+| +..++.+++++|++. +.+++.++..|+||||+|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a--~~~~~~~~~~~ll~~----gad~~~~d~~g~TpLh~A~~ 79 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHA--AENGHKEVVKLLISK----GADVNAKDSDGRTPLHHAAE 79 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHhc----ccchhhhccCCCCHHHHHHH
Confidence 469999999999999999999999999999999999999 999999999999985 77889999999999999999
Q ss_pred cCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHH
Q 037129 106 FGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPL 185 (227)
Q Consensus 106 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l 185 (227)
.|+.+++++|+++|++++. ++..|+||||+|+..|+.+++++|++.|+++ +.++..|.|||
T Consensus 80 ~g~~~~v~~Ll~~gadvn~------------------~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL 140 (169)
T 4gpm_A 80 NGHKEVVKLLISKGADVNA------------------KDSDGRTPLHHAAENGHKEVVKLLISKGADV-NTSDSDGRTPL 140 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred cCCHHHHHHHHHCcCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHH
Confidence 9999999999999998765 7899999999999999999999999999995 48899999999
Q ss_pred HHHHHcCcHHHHHHHHhcCCCCccc
Q 037129 186 YMAAESRSSNMVLALLENRTSVSHE 210 (227)
Q Consensus 186 ~~A~~~~~~~~v~~Ll~~g~~~~~~ 210 (227)
++|+..++.+++++|+++|++++..
T Consensus 141 ~~A~~~g~~~iv~~Ll~~GA~ie~~ 165 (169)
T 4gpm_A 141 DLAREHGNEEVVKLLEKQGGWLEHH 165 (169)
T ss_dssp HHHHHTTCHHHHHHHHTC-------
T ss_pred HHHHHcCCHHHHHHHHHCCCCcCCC
Confidence 9999999999999999999998753
No 2
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.2e-37 Score=230.02 Aligned_cols=181 Identities=19% Similarity=0.165 Sum_probs=168.6
Q ss_pred ccCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHH
Q 037129 22 QQMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLH 101 (227)
Q Consensus 22 ~~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~ 101 (227)
..+.+|||+|+..|+.++|++|++.|.+++..+..|.||||+| +..++.+++++|++.. ...++..+..|.||||
T Consensus 55 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~~---~~~~~~~~~~g~t~L~ 129 (253)
T 1yyh_A 55 RTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA--VSADAQGVFQILIRNR---ATDLDARMHDGTTPLI 129 (253)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHHTCHHHHHHHHHST---TSCTTCCCTTCCCHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHHcC---CCCccccCCCCCcHHH
Confidence 3456789999999999999999999999999999999999999 9999999999999852 3367888999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCC
Q 037129 102 VAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYG 181 (227)
Q Consensus 102 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~ 181 (227)
+|+..|+.+++++|++.|...+. .+..|.||||+|+..|+.+++++|++.|+++. ..+..|
T Consensus 130 ~A~~~~~~~~v~~Ll~~g~~~~~------------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g 190 (253)
T 1yyh_A 130 LAARLAVEGMLEDLINSHADVNA------------------VDDLGKSALHWAAAVNNVDAAVVLLKNGANKD-MQNNRE 190 (253)
T ss_dssp HHHHHTCSSHHHHHHHTTCCTTC------------------BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTS
T ss_pred HHHHcChHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCC
Confidence 99999999999999999988664 78899999999999999999999999999954 789999
Q ss_pred CCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 182 KTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 182 ~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
.||||+|+..++.+++++|+++|++++.+|..|.||+++|+.+|+
T Consensus 191 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~ 235 (253)
T 1yyh_A 191 ETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 235 (253)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCC
Confidence 999999999999999999999999999999999999999999987
No 3
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.1e-36 Score=222.01 Aligned_cols=181 Identities=19% Similarity=0.165 Sum_probs=168.0
Q ss_pred ccCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHH
Q 037129 22 QQMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLH 101 (227)
Q Consensus 22 ~~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~ 101 (227)
..+.+|||.|+..|+.++|++|++.|.+++..+..|.||||+| +..++.+++++|++. .+..++..+..|.||||
T Consensus 23 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~---~~~~~~~~~~~g~t~L~ 97 (223)
T 2f8y_A 23 RTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAA--VSADAQGVFQILIRN---RATDLDARMHDGTTPLI 97 (223)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHB---TTSCTTCCCTTCCCHHH
T ss_pred CCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHHc---CCCCcccCCCCCCcHHH
Confidence 4456779999999999999999999999999999999999999 999999999999984 23467888999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCC
Q 037129 102 VAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYG 181 (227)
Q Consensus 102 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~ 181 (227)
+|+..++.+++++|+++|...+. .+..|.||||+|+..++.+++++|++.|+++. ..+..|
T Consensus 98 ~A~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g 158 (223)
T 2f8y_A 98 LAARLAVEGMLEDLINSHADVNA------------------VDDLGKSALHWAAAVNNVDAAVVLLKNGANKD-MQNNRE 158 (223)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTC------------------BCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTC
T ss_pred HHHHhCcHHHHHHHHHcCCCCcC------------------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCC
Confidence 99999999999999999988654 68889999999999999999999999999854 788999
Q ss_pred CCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 182 KTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 182 ~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
.||||+|+..++.+++++|+++|++++.++..|.||+++|+.+|+
T Consensus 159 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 203 (223)
T 2f8y_A 159 ETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 203 (223)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999886
No 4
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3.7e-37 Score=231.85 Aligned_cols=198 Identities=19% Similarity=0.211 Sum_probs=163.5
Q ss_pred cCCHHHHHHHhcCCchHHHhhHhhhhc---cccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCH
Q 037129 23 QMDPIFFNAAAAGNSEPFKDMAGEEIK---SLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTP 99 (227)
Q Consensus 23 ~~~~~l~~a~~~g~~~~v~~ll~~~~~---~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tp 99 (227)
.+.+|||.|+..|+.++|++|++.|.+ ++..+..|.||||+| +..|+.+++++|++. +.+++.++..|+||
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~----ga~~~~~~~~g~tp 81 (282)
T 1oy3_D 8 DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLA--AILGEASTVEKLYAA----GAGVLVAERGGHTA 81 (282)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCSSCCCTTSCCH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCCCCCCCCCH
Confidence 345579999999999999999998887 668888999999999 999999999999986 77888999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcccccchhhhhh-------------HHHH----------------HHHHHhccCCCCcH
Q 037129 100 LHVAAKFGHSDIVRFLVERAKLTQHENEELESR-------------VGAA----------------WQIIRMTNKEKNTA 150 (227)
Q Consensus 100 l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~-------------~~~~----------------~~~~~~~~~~~~t~ 150 (227)
||+|+..|+.+++++|+++|............. .... ...++..+..|.||
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~ 161 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP 161 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCH
T ss_pred HHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCH
Confidence 999999999999999999886643221110000 0000 00134467789999
Q ss_pred HHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 151 LHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 151 l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
||+|+..|+.+++++|++.|+++....+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+.+|+
T Consensus 162 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~ 237 (282)
T 1oy3_D 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPN 237 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCC
Confidence 9999999999999999999999664444569999999999999999999999999999999999999999998876
No 5
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.3e-37 Score=226.72 Aligned_cols=179 Identities=22% Similarity=0.189 Sum_probs=161.0
Q ss_pred cCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHH
Q 037129 23 QMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHV 102 (227)
Q Consensus 23 ~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~ 102 (227)
.+.+|||.|+..|+.++|++|++.|.+++..+..|.||||+| +..++.+++++|++. +.+++.++..|.||||+
T Consensus 39 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~ 112 (231)
T 3aji_A 39 DSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIA--ASAGXDEIVKALLVK----GAHVNAVNQNGCTPLHY 112 (231)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHH--HHcCHHHHHHHHHHc----CCCCCCCCCCCCCHHHH
Confidence 455679999999999999999999988888888899999999 999999999998885 66778888889999999
Q ss_pred HHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCC
Q 037129 103 AAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGK 182 (227)
Q Consensus 103 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 182 (227)
|+..++.+++++|+++|...+. .+..|.||||+|+..|+.+++++|++.|+++. ..+..|.
T Consensus 113 A~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~ 173 (231)
T 3aji_A 113 AASKNRHEIAVMLLEGGANPDA------------------KDHYDATAMHRAAAKGNLKMVHILLFYKASTN-IQDTEGN 173 (231)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTSC
T ss_pred HHHcCCHHHHHHHHHcCCCCCC------------------cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcc-ccCCCCC
Confidence 9999999999999998887654 67889999999999999999999999999854 7889999
Q ss_pred CHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 183 TPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 183 t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
||||+|+..++.+++++|+++|++++.++..|.||+++|+.+++
T Consensus 174 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 174 TPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHH
Confidence 99999999999999999999999999999999999999987653
No 6
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.7e-36 Score=221.24 Aligned_cols=195 Identities=15% Similarity=0.103 Sum_probs=164.6
Q ss_pred CCHHHHHHHhcCCchHHHhhHhh-hhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhC-CcccccccCCCCCHHH
Q 037129 24 MDPIFFNAAAAGNSEPFKDMAGE-EIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKC-PLLLLQVNAKDDTPLH 101 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~g~tpl~ 101 (227)
+.+|||.|+..|+.++|++|++. |.+++..+..|.||||+| +..|+.+++++|++..... ....+..+..|+||||
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIA--ALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHH--HHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 45689999999999999999997 999999999999999999 9999999999999973321 1112566778999999
Q ss_pred HHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCC
Q 037129 102 VAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYG 181 (227)
Q Consensus 102 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~ 181 (227)
+|+..|+.+++++|+++|...+.......... .....+..|.||||+|+..|+.+++++|++.|+++. ..+..|
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g 154 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASVSARATGSVFHY-----RPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR-AQDSLG 154 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSC-----CTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTS
T ss_pred HHHHcCCHHHHHHHHhCCCCCCcccCCcceee-----cccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCC
Confidence 99999999999999999988765321100000 011124579999999999999999999999999954 889999
Q ss_pred CCHHHHHHHcCcHHHH----HHHHhcCCCC------cccCCCCCCHHHHHHHhcC
Q 037129 182 KTPLYMAAESRSSNMV----LALLENRTSV------SHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 182 ~t~l~~A~~~~~~~~v----~~Ll~~g~~~------~~~~~~g~t~l~~a~~~~~ 226 (227)
.||||+|+..++.+++ ++|+++|+++ +.+|..|.||||+|+.+|+
T Consensus 155 ~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~ 209 (232)
T 2rfa_A 155 NTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGN 209 (232)
T ss_dssp CCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTC
T ss_pred CCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCC
Confidence 9999999999999988 9999999998 5899999999999999886
No 7
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=7.5e-37 Score=238.38 Aligned_cols=212 Identities=16% Similarity=0.199 Sum_probs=157.6
Q ss_pred CCcccccccccchhhhccCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhC
Q 037129 6 IEIEEAPLLDSNREIKQQMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKC 85 (227)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~ 85 (227)
+.+..++.+..+..|..+. ++||+|+..|+.++|++|++.|.+++..+..|.||||+| +..|+.+++++|++..
T Consensus 3 g~~~~~~~~~~~~~d~~g~-t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~g--- 76 (364)
T 3ljn_A 3 GSMTDFPKLNRIKSDDENM-EKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLA--CKFGCVDTAKYLASVG--- 76 (364)
T ss_dssp -------------CCHHHH-HHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH--HHHCCHHHHHHHHHHC---
T ss_pred CchhhccCCCccccCCCCC-CHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHH--HHcCCHHHHHHHHHCC---
Confidence 5566777777776666655 459999999999999999999999999999999999999 9999999999999873
Q ss_pred CcccccccCCCCCHHHHHHHcCCHHHHHHHHHh----hhcccc-----------------cchhhhhhH-----------
Q 037129 86 PLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVER----AKLTQH-----------------ENEELESRV----------- 133 (227)
Q Consensus 86 ~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~----~~~~~~-----------------~~~~~~~~~----------- 133 (227)
.. ..+..|+||||+|+..|+.+++++|++. |...+. .+....+++
T Consensus 77 -~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~ 153 (364)
T 3ljn_A 77 -EV--HSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYL 153 (364)
T ss_dssp -CC--CCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGH
T ss_pred -CC--ccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchH
Confidence 22 2334677777777777777777777777 332221 111111111
Q ss_pred HHHHHH------HHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCC----CcccccCCCCHHHHHHHcCcHHHHHHHHhc
Q 037129 134 GAAWQI------IRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDY----PYSANNYGKTPLYMAAESRSSNMVLALLEN 203 (227)
Q Consensus 134 ~~~~~~------~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~----~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~ 203 (227)
.....+ ++..+..|.||||+|+..|+.+++++|++.|++. .+..+..|.||||+|+..|+.+++++|+++
T Consensus 154 ~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 233 (364)
T 3ljn_A 154 EMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEM 233 (364)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 111111 2346778999999999999999999999998872 337788999999999999999999999999
Q ss_pred CCCCcccCCCCCCHHHHHHHhcC
Q 037129 204 RTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 204 g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
|++++.+|..|.||||+|+.+|+
T Consensus 234 gad~~~~d~~g~tpL~~A~~~g~ 256 (364)
T 3ljn_A 234 GIDVNMEDNEHTVPLYLSVRAAM 256 (364)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTCC
T ss_pred CCCCCCCCCCCCCHHHHHHHhCh
Confidence 99999999999999999999886
No 8
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=225.30 Aligned_cols=192 Identities=19% Similarity=0.174 Sum_probs=138.2
Q ss_pred CHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHH
Q 037129 25 DPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAA 104 (227)
Q Consensus 25 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~ 104 (227)
.+|||.|+..|+.++|++|++.|.+++..+..|.||||+| +..|+.+++++|++. +.+++..+..|+||||+|+
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~ 77 (261)
T 2xai_A 4 WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEA--CLGGHLSCVKILLKH----GAQVNGVTADWHTPLFNAC 77 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHHC----CCCCCCCCCCCCCHHHHHH
Confidence 4557777777777777777777777777777777777777 777777777777764 5566666777777777777
Q ss_pred HcCCHHHHHHHHHhhhcccccchhhhhhHHHH---------HHH------HHhccCCCCcHHHHHHhcCCHHHHHHHHhc
Q 037129 105 KFGHSDIVRFLVERAKLTQHENEELESRVGAA---------WQI------IRMTNKEKNTALHEAVCHQNVDVVEILTKE 169 (227)
Q Consensus 105 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------~~~------~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~ 169 (227)
..|+.+++++|+++|...+.... ..+++... ..+ ++..+..|.||||+|+..++.+++++|++.
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 156 (261)
T 2xai_A 78 VSGSWDCVNLLLQHGASVQPESD-LASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLES 156 (261)
T ss_dssp HHTCHHHHHHHHHTTCCSSCSCT-TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCC-CCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 77777777777777666543211 11111110 011 133667788888888888888888888888
Q ss_pred CCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhc
Q 037129 170 DPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRS 225 (227)
Q Consensus 170 ~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 225 (227)
|+++. .+..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+.++
T Consensus 157 g~~~~--~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~ 210 (261)
T 2xai_A 157 GADVN--QGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPES 210 (261)
T ss_dssp TCCTT--CCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTC
T ss_pred CCCCC--CCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccccc
Confidence 88865 3778888999888888888888888888888888888889988887654
No 9
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-37 Score=230.84 Aligned_cols=178 Identities=19% Similarity=0.206 Sum_probs=147.4
Q ss_pred CCHHHHHHHhcCCch-HHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHH
Q 037129 24 MDPIFFNAAAAGNSE-PFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHV 102 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~-~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~ 102 (227)
+.+||+.|+..++.+ +++.|++.|++++..|..|.||||+| +..|+.+++++|++. +.+++..+..|.||+++
T Consensus 52 ~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A--~~~g~~~~v~~Ll~~----~a~~~~~~~~g~t~l~~ 125 (269)
T 4b93_B 52 FCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVA--ALHGRADLIPLLLKH----GANAGARNADQAVPLHL 125 (269)
T ss_dssp -----------------------CCCCTTCCCTTSCCHHHHH--HHTTCTTHHHHHHHT----TCCTTCCCTTCCCHHHH
T ss_pred CCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHH--HHcCcHHHHHHHHhc----CCCcCccCCCCCCcccc
Confidence 445799999888764 78999999999999999999999999 999999999999986 67788899999999999
Q ss_pred HHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCC
Q 037129 103 AAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGK 182 (227)
Q Consensus 103 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 182 (227)
|+..++.+++++|++.|..++. ++..|.||||+|+..|+.+++++|++.|++++ ..+..|.
T Consensus 126 a~~~~~~~~~~~Ll~~g~~~n~------------------~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn-~~~~~g~ 186 (269)
T 4b93_B 126 ACQQGHFQVVKCLLDSNAKPNK------------------KDLSGNTPLIYACSGGHHELVALLLQHGASIN-ASNNKGN 186 (269)
T ss_dssp HHHHTCHHHHHHHHHTTCCSCC------------------CCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTT-CBCTTSC
T ss_pred ccccChHHHHHHHHHCCCCCCC------------------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC-ccccCCC
Confidence 9999999999999999988765 78999999999999999999999999999954 8899999
Q ss_pred CHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 183 TPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 183 t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|.
T Consensus 187 t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 187 TALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence 99999999999999999999999999999999999999987763
No 10
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.2e-35 Score=213.15 Aligned_cols=180 Identities=21% Similarity=0.250 Sum_probs=163.2
Q ss_pred cCCHHHHHHHhcCCchHHHhhHhhhh-ccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHH
Q 037129 23 QMDPIFFNAAAAGNSEPFKDMAGEEI-KSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLH 101 (227)
Q Consensus 23 ~~~~~l~~a~~~g~~~~v~~ll~~~~-~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~ 101 (227)
...++|+.|+..|+.+.|+.|+..+. +++..+..|.||||+| +..|+.+++++|++. +.+++.++..|+||||
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~l~ 77 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIA--VHNNDIEIAKALIDR----GADINLQNSISDSPYL 77 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHH
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCCCCCCCCCHHH
Confidence 34567999999999999999999665 8888999999999999 999999999999986 7788899999999999
Q ss_pred HHHHcCCHHHHHHHHHhhh-cccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccC
Q 037129 102 VAAKFGHSDIVRFLVERAK-LTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNY 180 (227)
Q Consensus 102 ~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~ 180 (227)
+|+..|+.+++++|++.+. ..+ ..+..|.||||+|+..++.+++++|++.|....+..+..
T Consensus 78 ~A~~~~~~~~~~~Ll~~~~~~~~------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 139 (201)
T 3hra_A 78 YAGAQGRTEILAYMLKHATPDLN------------------KHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDF 139 (201)
T ss_dssp HHHHTTCHHHHHHHHHHSCCCTT------------------CCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTT
T ss_pred HHHHcCCHHHHHHHHhccCcccc------------------cccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCC
Confidence 9999999999999996654 332 367889999999999999999999999994335688999
Q ss_pred CCCHHHHHHHcCc-----HHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 181 GKTPLYMAAESRS-----SNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 181 ~~t~l~~A~~~~~-----~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
|.||||.|+..++ .+++++|+++|++++.+|..|.|||++|+.+|+
T Consensus 140 g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 190 (201)
T 3hra_A 140 GYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGY 190 (201)
T ss_dssp SCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCC
Confidence 9999999999998 999999999999999999999999999999886
No 11
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.3e-36 Score=222.64 Aligned_cols=193 Identities=16% Similarity=0.157 Sum_probs=109.7
Q ss_pred HHHHHHhcCCchHHHhhHh----hhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHH
Q 037129 27 IFFNAAAAGNSEPFKDMAG----EEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHV 102 (227)
Q Consensus 27 ~l~~a~~~g~~~~v~~ll~----~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~ 102 (227)
+||.|+..|+.++|++|++ .+.+++..+..|.||||+| +..|+.+++++|++. +.+++..+..|+||||+
T Consensus 12 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~l~~ 85 (241)
T 1k1a_A 12 PLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLA--VITTLPSVVRLLVTA----GASPMALDRHGQTAAHL 85 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHH--HHcCCHHHHHHHHHc----CCCccccCCCCCCHHHH
Confidence 3555555555555555554 3444444454555555555 555555555555543 34444445555555555
Q ss_pred HHHcCCHHHHHHHHHhhh----cccccchhhhhhHHHH---------HHH------HHhcc-CCCCcHHHHHHhcCCHHH
Q 037129 103 AAKFGHSDIVRFLVERAK----LTQHENEELESRVGAA---------WQI------IRMTN-KEKNTALHEAVCHQNVDV 162 (227)
Q Consensus 103 A~~~~~~~~v~~Ll~~~~----~~~~~~~~~~~~~~~~---------~~~------~~~~~-~~~~t~l~~A~~~~~~~~ 162 (227)
|+..|+.+++++|++.+. ..+..+....+++... ..+ .+..+ ..|.||||+|+..++.++
T Consensus 86 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (241)
T 1k1a_A 86 ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSM 165 (241)
T ss_dssp HHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred HHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHH
Confidence 555555555555555544 2111111111111000 000 01133 567777777777777777
Q ss_pred HHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 163 VEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 163 ~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
+++|++.|+++. ..+..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+.+|+
T Consensus 166 v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 228 (241)
T 1k1a_A 166 VQLLLQHGANVN-AQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRV 228 (241)
T ss_dssp HHHHHHTTCCTT-CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHH
T ss_pred HHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCc
Confidence 777777777743 667777777777777777777777777777777777777777777776654
No 12
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.3e-35 Score=218.30 Aligned_cols=196 Identities=23% Similarity=0.282 Sum_probs=140.4
Q ss_pred CCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHH
Q 037129 24 MDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVA 103 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A 103 (227)
+.+|||.|+..|+.+++++|++.|.+++..+..|.||||+| +..|+.+++++|++. +..++..+..|.||||+|
T Consensus 11 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A 84 (237)
T 3b7b_A 11 KRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEA--AENNHLEAVKYLIKA----GALVDPKDAEGSTCLHLA 84 (237)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH--HHTTCHHHHHHHHTT----TCCCCCCCTTSCCHHHHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHH--HHhCCHHHHHHHHhC----CCCCCCCCCCCCcHHHHH
Confidence 34457777777777777777777777666666777777777 777777777777654 555666666677777777
Q ss_pred HHcCCHHHHHHHHHhh-hcccccchhhhhhHHHH---------HHH------HHhccCCCCcHHHHHHhcCCHHHHHHHH
Q 037129 104 AKFGHSDIVRFLVERA-KLTQHENEELESRVGAA---------WQI------IRMTNKEKNTALHEAVCHQNVDVVEILT 167 (227)
Q Consensus 104 ~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~---------~~~------~~~~~~~~~t~l~~A~~~~~~~~~~~ll 167 (227)
+..|+.+++++|++.| ...+..+....+++... ..+ ++.++..|.||||+|+..|+.+++++|+
T Consensus 85 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 164 (237)
T 3b7b_A 85 AKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILL 164 (237)
T ss_dssp HHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 7777777777777766 33332222222221111 011 1235677889999999999999999999
Q ss_pred hcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 168 KEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 168 ~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
+.|+++. ..+..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+.+|+
T Consensus 165 ~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 165 AAKCDLH-AVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp TTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCH
T ss_pred HcCCCCC-CcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHH
Confidence 9988854 778889999999999999999999999999999999999999999988764
No 13
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.8e-35 Score=216.82 Aligned_cols=173 Identities=25% Similarity=0.275 Sum_probs=148.0
Q ss_pred cccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhh
Q 037129 52 LTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELES 131 (227)
Q Consensus 52 ~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 131 (227)
..|..|.||||+| +..|+.+++++|++.+...+..++.++..|+||||+|+..|+.+++++|+++|...+..+....+
T Consensus 4 ~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 81 (241)
T 1k1a_A 4 RADEDGDTPLHIA--VVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQT 81 (241)
T ss_dssp ---CTTCCHHHHH--HHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred ccCCCCCcHHHHH--HHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence 5678999999999 99999999999999888888999999999999999999999999999999999887765554444
Q ss_pred hHHHH---------HHH----------HHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcC
Q 037129 132 RVGAA---------WQI----------IRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESR 192 (227)
Q Consensus 132 ~~~~~---------~~~----------~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~ 192 (227)
++... ..+ .+..+..|.||||+|+..++.+++++|++.|+++....+..|.||||+|+..+
T Consensus 82 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~ 161 (241)
T 1k1a_A 82 AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENN 161 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcC
Confidence 33322 111 12345678999999999999999999999999966443378999999999999
Q ss_pred cHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 193 SSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 193 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
+.+++++|+++|++++.++..|.||||+|+.+|+
T Consensus 162 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 195 (241)
T 1k1a_A 162 SLSMVQLLLQHGANVNAQMYSGSSALHSASGRGL 195 (241)
T ss_dssp CHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTC
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 9999999999999999999999999999999876
No 14
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.6e-36 Score=223.42 Aligned_cols=185 Identities=19% Similarity=0.161 Sum_probs=139.3
Q ss_pred cchhhhccCCHHHHHHHhcC-------------CchHHHhhHhhhhccc-cccCCCCchhhhhhhhcccccccHHHHHHH
Q 037129 16 SNREIKQQMDPIFFNAAAAG-------------NSEPFKDMAGEEIKSL-LTAKTENTILHINIISQERENVSTKFVAEI 81 (227)
Q Consensus 16 ~~~~~~~~~~~~l~~a~~~g-------------~~~~v~~ll~~~~~~~-~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~ 81 (227)
.+..+.. +.+|||.|+..| +.+++++|++.|.+++ ..+..|.||||+| +..|+.+++++|++.
T Consensus 3 vn~~d~~-g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~ 79 (253)
T 1yyh_A 3 VNVRGPD-GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLA--ARYSRSDAAKRLLEA 79 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHH--HHTTCHHHHHHHHHT
T ss_pred CCCCCCC-CCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHH--HHcCCHHHHHHHHHc
Confidence 3445554 455699999987 8999999999999986 4588999999999 999999999999986
Q ss_pred HHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhh-cccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCH
Q 037129 82 LEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAK-LTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNV 160 (227)
Q Consensus 82 ~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~ 160 (227)
+.+++..+..|+||||+|+..|+.+++++|++.+. ..+ ..+..|.||||+|+..++.
T Consensus 80 ----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~------------------~~~~~g~t~L~~A~~~~~~ 137 (253)
T 1yyh_A 80 ----SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD------------------ARMHDGTTPLILAARLAVE 137 (253)
T ss_dssp ----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTT------------------CCCTTCCCHHHHHHHHTCS
T ss_pred ----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc------------------ccCCCCCcHHHHHHHcChH
Confidence 77888999999999999999999999999999987 333 3678999999999999999
Q ss_pred HHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 161 DVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 161 ~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
+++++|++.|+++. ..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+.+|+
T Consensus 138 ~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~ 202 (253)
T 1yyh_A 138 GMLEDLINSHADVN-AVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGS 202 (253)
T ss_dssp SHHHHHHHTTCCTT-CBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCC
Confidence 99999999999954 788999999999999999999999999999999999999999999999886
No 15
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=7.5e-36 Score=219.50 Aligned_cols=173 Identities=18% Similarity=0.178 Sum_probs=142.7
Q ss_pred CCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHH
Q 037129 24 MDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVA 103 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A 103 (227)
+.+||+.|+..|+.+++++|++.|.+++..+..|.||||+| +..++.+++++|++.. +..++..+..|+||||+|
T Consensus 44 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~~~~Ll~~~---~~~~~~~~~~g~t~L~~A 118 (237)
T 3b7b_A 44 QRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLA--AKKGHYEVVQYLLSNG---QMDVNCQDDGGWTPMIWA 118 (237)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHH--HHTTCHHHHHHHHTTT---CCCTTCCCTTSCCHHHHH
T ss_pred CCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH--HHcCCHHHHHHHHhCC---CCCcccCCCCCCCHHHHH
Confidence 45679999999999999999999998888888999999999 9999999999998852 356778888899999999
Q ss_pred HHcCCHHHHHHHHHhhhcccccchhhhhhHHHHH---------HH------HHhccCCCCcHHHHHHhcCCHHHHHHHHh
Q 037129 104 AKFGHSDIVRFLVERAKLTQHENEELESRVGAAW---------QI------IRMTNKEKNTALHEAVCHQNVDVVEILTK 168 (227)
Q Consensus 104 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~---------~~------~~~~~~~~~t~l~~A~~~~~~~~~~~ll~ 168 (227)
+..++.+++++|+++|...+..+....+++.... .+ ++..+..|.||||+|+..++.+++++|++
T Consensus 119 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 198 (237)
T 3b7b_A 119 TEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLS 198 (237)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHH
Confidence 9999999999999998887665554444433221 11 13466789999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHh
Q 037129 169 EDPDYPYSANNYGKTPLYMAAESRSSNMVLALLE 202 (227)
Q Consensus 169 ~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~ 202 (227)
.|+++ +.++..|.||||+|+..++...+..|++
T Consensus 199 ~gad~-~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 199 RDSDV-TLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp TTCCT-TCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred cCCCC-CccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99995 4889999999999999999876665553
No 16
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3e-35 Score=222.05 Aligned_cols=194 Identities=18% Similarity=0.157 Sum_probs=160.1
Q ss_pred ccCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHH
Q 037129 22 QQMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLH 101 (227)
Q Consensus 22 ~~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~ 101 (227)
..+.++||.|+..|+.++|++|++.|.+++..+..|.||||+| +..|+.+++++|++. +.+++.++..|+||||
T Consensus 57 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~----ga~~~~~~~~g~t~L~ 130 (285)
T 3d9h_A 57 VSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEA--CLGGHLSCVKILLKH----GAQVNGVTADWHTPLF 130 (285)
T ss_dssp CCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCSSCCCTTCCCHHH
T ss_pred ccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH--HHCCcHHHHHHHHHC----CCCCCCCCCCCCCHHH
Confidence 3455679999999999999999999999999999999999999 999999999999986 7788899999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHH---------HHH------HHhccCCCCcHHHHHHhcCCHHHHHHH
Q 037129 102 VAAKFGHSDIVRFLVERAKLTQHENEELESRVGAA---------WQI------IRMTNKEKNTALHEAVCHQNVDVVEIL 166 (227)
Q Consensus 102 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------~~~------~~~~~~~~~t~l~~A~~~~~~~~~~~l 166 (227)
+|+..|+.+++++|+++|........ ..+++... ..+ ++.++..|.||||+|+..++.+++++|
T Consensus 131 ~A~~~~~~~~v~~Ll~~g~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~L 209 (285)
T 3d9h_A 131 NACVSGSWDCVNLLLQHGASVQPESD-LASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKL 209 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCSCT-TSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCHHHHHHHHHHCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence 99999999999999999987654322 22222111 111 134667788888888888888888888
Q ss_pred HhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHh
Q 037129 167 TKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMR 224 (227)
Q Consensus 167 l~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~ 224 (227)
++.|+++. .+..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+.+
T Consensus 210 l~~ga~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~ 265 (285)
T 3d9h_A 210 LESGADVN--QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPE 265 (285)
T ss_dssp HHTTCCTT--CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT
T ss_pred HHCCCCCC--CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcCc
Confidence 88888864 377788888888888888888888888888888888888888888743
No 17
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.7e-35 Score=215.24 Aligned_cols=179 Identities=16% Similarity=0.093 Sum_probs=132.1
Q ss_pred CCHHHHHHHhcCCchHHHhhHhhh--hcccc-ccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHH
Q 037129 24 MDPIFFNAAAAGNSEPFKDMAGEE--IKSLL-TAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPL 100 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v~~ll~~~--~~~~~-~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl 100 (227)
+.+|||+|+..|+.+++++|++.| ++++. .+..|.||||+| +..++.+++++|++.. .+.+++..+..|.|||
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~~~~Ll~~g--~~~~~~~~~~~g~t~L 111 (228)
T 2dzn_A 36 GRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIA--CSVGNLEVVKSLYDRP--LKPDLNKITNQGVTCL 111 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHH--HHHCCHHHHHHHHSSS--SCCCTTCCCTTCCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHH--HHcCCHHHHHHHHhCC--CCcccccCCcCCCCHH
Confidence 345677777777777777777766 55444 666777777777 7777777777777641 1255666677777777
Q ss_pred HHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccC
Q 037129 101 HVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNY 180 (227)
Q Consensus 101 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~ 180 (227)
|+|+..|+.+++++|+++|...+. ++..|.||||+|+..|+.+++++|++.|....+..+..
T Consensus 112 ~~A~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~ 173 (228)
T 2dzn_A 112 HLAVGKKWFEVSQFLIENGASVRI------------------KDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQ 173 (228)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSCC------------------CCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTT
T ss_pred HHHHHcCCHhHHHHHHHcCCCccc------------------cCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCC
Confidence 777777777777777777766543 56778888888888888888888888883334577788
Q ss_pred CCCHHHHHHHcCcHHHHHHHH-hcCCCCcccCCCCCCHHHHHHHh
Q 037129 181 GKTPLYMAAESRSSNMVLALL-ENRTSVSHEGPNGKTALHAAAMR 224 (227)
Q Consensus 181 ~~t~l~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~a~~~ 224 (227)
|.||||+|+..++.+++++|+ ++|++++.+|..|.||+++|+..
T Consensus 174 g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 174 GWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH
Confidence 888888888888888888888 77888888888888888887654
No 18
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=6.5e-36 Score=227.04 Aligned_cols=195 Identities=23% Similarity=0.239 Sum_probs=169.3
Q ss_pred cCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHH
Q 037129 23 QMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHV 102 (227)
Q Consensus 23 ~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~ 102 (227)
...++|+.||..|+.++|++|++.|.+++..+..|.||||+| +..|+.+++++|++. +.+++..+..|+||||+
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~----ga~~~~~~~~g~tpL~~ 112 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQA--CIDDNVDMVKFLVEN----GANINQPDNEGWIPLHA 112 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH--HHcCCHHHHHHHHHC----CCCCCCCCCCCCcHHHH
Confidence 446789999999999999999999999999999999999999 999999999999985 77888999999999999
Q ss_pred HHHcCCHHHHHHHHHhhhcccccchhhhhhHHHH---------HHHH--------------------------H------
Q 037129 103 AAKFGHSDIVRFLVERAKLTQHENEELESRVGAA---------WQII--------------------------R------ 141 (227)
Q Consensus 103 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~---------~~~~--------------------------~------ 141 (227)
|+..|+.+++++|+++|...+..+....+++... ..++ .
T Consensus 113 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 192 (299)
T 1s70_B 113 AASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHIND 192 (299)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcch
Confidence 9999999999999999988765544333322110 0000 0
Q ss_pred -hccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHH
Q 037129 142 -MTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHA 220 (227)
Q Consensus 142 -~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 220 (227)
..+..|.||||+|+..|+.+++++|++.|+++. ..+..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++
T Consensus 193 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~ 271 (299)
T 1s70_B 193 VRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVN-IKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDV 271 (299)
T ss_dssp CCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTS
T ss_pred hhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 134679999999999999999999999999954 889999999999999999999999999999999999999999999
Q ss_pred HHHh
Q 037129 221 AAMR 224 (227)
Q Consensus 221 a~~~ 224 (227)
|+..
T Consensus 272 A~~~ 275 (299)
T 1s70_B 272 ADED 275 (299)
T ss_dssp CCSG
T ss_pred HHHH
Confidence 8654
No 19
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.4e-35 Score=220.51 Aligned_cols=195 Identities=17% Similarity=0.091 Sum_probs=158.9
Q ss_pred CCHHHHHHHhcCCchHH----HhhHhhhhcccc----ccCCCCchhhhhhhhcc---cccccHHHHHHHHHhCCcc---c
Q 037129 24 MDPIFFNAAAAGNSEPF----KDMAGEEIKSLL----TAKTENTILHINIISQE---RENVSTKFVAEILEKCPLL---L 89 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v----~~ll~~~~~~~~----~~~~g~t~L~~a~~~~~---~~~~~~~~l~~~~~~~~~~---~ 89 (227)
+.++||.|+..|+.+.| ++|++.|.+++. .+..|.||||+| +.. |+.+++++|++........ +
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A--~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 79 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKA--VLNLQDGVNACIMPLLQIDKDSGNPKPLV 79 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHH--HHTCBTTBCTTHHHHHHHHHHTTCSSCGG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHH--HHccccchHHHHHHHHhcCCcccchhhhc
Confidence 45789999999999855 555558999887 789999999999 988 9999999999986654211 1
Q ss_pred c----cccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHH
Q 037129 90 L----QVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEI 165 (227)
Q Consensus 90 ~----~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ 165 (227)
+ ..+..|+||||+|+..|+.+++++|+++|+..+..+........ ....+..|.||||+|+..|+.+++++
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~-----~~~~~~~g~tpL~~A~~~~~~~~v~~ 154 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKH-----QGTCFYFGELPLSLAACTKQWDVVTY 154 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCC-----SSSCCCSCSSHHHHHHHTTCHHHHHH
T ss_pred ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccccccccc-----ccccccCCCCHHHHHHHcCCHHHHHH
Confidence 1 23467999999999999999999999999887652111000000 00011239999999999999999999
Q ss_pred HHh---cCCCCCcccccCCCCHHHHHHH--cCcHH-------HHHHHHhcCCCC-------cccCCCCCCHHHHHHHhcC
Q 037129 166 LTK---EDPDYPYSANNYGKTPLYMAAE--SRSSN-------MVLALLENRTSV-------SHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 166 ll~---~~~~~~~~~~~~~~t~l~~A~~--~~~~~-------~v~~Ll~~g~~~-------~~~~~~g~t~l~~a~~~~~ 226 (227)
|++ .|+++. ..+..|.||||+|+. .++.+ ++++|+++|+++ +.+|..|.||||+|+.+|+
T Consensus 155 Ll~~~~~ga~~n-~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 233 (256)
T 2etb_A 155 LLENPHQPASLE-ATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGK 233 (256)
T ss_dssp HHHCSSCCCCTT-CCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HHhccccCCCcC-ccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCC
Confidence 999 899854 889999999999998 88888 999999999999 9999999999999999986
No 20
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.1e-35 Score=223.75 Aligned_cols=181 Identities=21% Similarity=0.215 Sum_probs=151.3
Q ss_pred cCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHh------------------
Q 037129 23 QMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEK------------------ 84 (227)
Q Consensus 23 ~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~------------------ 84 (227)
.+.+|||+|+..|+.++|++|++.|.+++..+..|.||||+| +..++.+++++|++....
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A--~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 121 (282)
T 1oy3_D 44 LGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLA--CRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTP 121 (282)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHH--TTTTCHHHHHHHSSSCCSSCCCC-------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH--HHcCCcchhHhhhccCCCCchhhHHHHhhcccccCc
Confidence 345679999999999999999999999999999999999999 999999999999874211
Q ss_pred -------------------------CCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHH
Q 037129 85 -------------------------CPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQI 139 (227)
Q Consensus 85 -------------------------~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 139 (227)
.+..++..+..|.||||+|+..|+.+++++|+++|...+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--------------- 186 (282)
T 1oy3_D 122 DTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNK--------------- 186 (282)
T ss_dssp ----------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC---------------
T ss_pred chhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCC---------------
Confidence 1223667788999999999999999999999999988764
Q ss_pred HHhcc-CCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHH
Q 037129 140 IRMTN-KEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTAL 218 (227)
Q Consensus 140 ~~~~~-~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 218 (227)
.+ ..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..++.+++++|+++|++++.++..|.||+
T Consensus 187 ---~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl 262 (282)
T 1oy3_D 187 ---PEPTCGRTPLHLAVEAQAASVLELLLKAGADP-TARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPC 262 (282)
T ss_dssp ---CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC-------
T ss_pred ---CCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-cccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccc
Confidence 44 45999999999999999999999999995 48899999999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 037129 219 HAAAMR 224 (227)
Q Consensus 219 ~~a~~~ 224 (227)
++|...
T Consensus 263 ~~a~~~ 268 (282)
T 1oy3_D 263 SSSGSD 268 (282)
T ss_dssp ------
T ss_pred cccCCc
Confidence 998764
No 21
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=6.2e-35 Score=213.79 Aligned_cols=178 Identities=21% Similarity=0.277 Sum_probs=164.2
Q ss_pred CCHHHHHHHhcCCchHHHhhHhhhhc-cccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHH
Q 037129 24 MDPIFFNAAAAGNSEPFKDMAGEEIK-SLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHV 102 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v~~ll~~~~~-~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~ 102 (227)
.+++|+.|+..|+++.+++|++.+.+ .+..+..|.||||+| +..|+.+++++|++. +.+++.++..|+||||+
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~ 79 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWA--CSAGHTEIVEFLLQL----GVPVNDKDDAGWSPLHI 79 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCSCCCCTTSCCHHHH
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHH--HHcCcHHHHHHHHHh----CCCCCCcCCCCCCHHHH
Confidence 46679999999999999999986544 457788999999999 999999999999986 67788899999999999
Q ss_pred HHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCC
Q 037129 103 AAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGK 182 (227)
Q Consensus 103 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 182 (227)
|+..|+.+++++|+++|...+. .+..|.||||+|+..++.+++++|++.|.++. ..+..|.
T Consensus 80 A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~ 140 (231)
T 3aji_A 80 AASAGXDEIVKALLVKGAHVNA------------------VNQNGCTPLHYAASKNRHEIAVMLLEGGANPD-AKDHYDA 140 (231)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSC
T ss_pred HHHcCHHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCC
Confidence 9999999999999999988654 68899999999999999999999999999854 7888999
Q ss_pred CHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 183 TPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 183 t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
||||.|+..++.+++++|+++|++++.+|..|.||||+|+.+|+
T Consensus 141 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 184 (231)
T 3aji_A 141 TAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEER 184 (231)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC
T ss_pred cHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCC
Confidence 99999999999999999999999999999999999999999876
No 22
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=220.71 Aligned_cols=192 Identities=15% Similarity=0.129 Sum_probs=154.4
Q ss_pred CCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHH
Q 037129 24 MDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVA 103 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A 103 (227)
+.+|||.|+..|+.+++++|++.|.+++..+..|.||||+| +..|+.+++++|++. +.+++. +..|.||||+|
T Consensus 36 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~-~~~g~t~L~~A 108 (261)
T 2xai_A 36 HVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNA--CVSGSWDCVNLLLQH----GASVQP-ESDLASPIHEA 108 (261)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCSSC-SCTTCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHHC----CCCCCC-CCCCCCHHHHH
Confidence 45579999999999999999999999888888999999999 999999999999886 444443 44588888888
Q ss_pred HHcCCHHHHHHHHHhhhcccccchhhhhhHHHHH---------HHHH-----hccCCCCcHHHHHHhcCCHHHHHHHHhc
Q 037129 104 AKFGHSDIVRFLVERAKLTQHENEELESRVGAAW---------QIIR-----MTNKEKNTALHEAVCHQNVDVVEILTKE 169 (227)
Q Consensus 104 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~---------~~~~-----~~~~~~~t~l~~A~~~~~~~~~~~ll~~ 169 (227)
+..|+.+++++|+++|...+..+....+++.... .++. ..+..|.||||+|+..++.+++++|++.
T Consensus 109 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~ 188 (261)
T 2xai_A 109 ARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMDF 188 (261)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHcCCHHHHHHHHHc
Confidence 8888888888888888877765555444443221 1111 1367899999999999999999999999
Q ss_pred CCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCC--------CcccCCCCCCHHHHHHHhc
Q 037129 170 DPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTS--------VSHEGPNGKTALHAAAMRS 225 (227)
Q Consensus 170 ~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~--------~~~~~~~g~t~l~~a~~~~ 225 (227)
|+++ +.++..|.|||++|+..+ +++++|++++.. +..++..|.||+|.|.+..
T Consensus 189 gad~-~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~ 249 (261)
T 2xai_A 189 GADT-QAKNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLV 249 (261)
T ss_dssp TCCT-TCCCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSS
T ss_pred CCCC-CCcCCCCCChhhhccccc--cHHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccC
Confidence 9995 489999999999999654 589999998764 4578999999999987654
No 23
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.5e-35 Score=223.77 Aligned_cols=175 Identities=17% Similarity=0.089 Sum_probs=160.2
Q ss_pred CCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHH
Q 037129 24 MDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVA 103 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A 103 (227)
+.+|||+|+..|+.++|++|++.|.+++.. +|.||||+| +..|+.+++++|++. +.+++.++..|+||||+|
T Consensus 31 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A--~~~g~~~~v~~Ll~~----ga~~~~~d~~g~t~L~~A 102 (285)
T 3kea_A 31 GHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQA--ATLEDTKIVKILLFS----GLDDSQFDDKGNTALYYA 102 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHH--TTSSSCHHHHHHHHT----TCCTTCCCTTSCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHH--HHcCCHHHHHHHHHC----CCCCCCcCCCCCcHHHHH
Confidence 455799999999999999999999997766 589999999 999999999999986 778889999999999999
Q ss_pred HHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCC-CcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCC
Q 037129 104 AKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEK-NTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGK 182 (227)
Q Consensus 104 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 182 (227)
+..|+.+++++|+++|+..+. .+..| .||||+|+..|+.+++++|++.|++... ...|.
T Consensus 103 ~~~g~~~~v~~Ll~~ga~~~~------------------~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~ 162 (285)
T 3kea_A 103 VDSGNMQTVKLFVKKNWRLMF------------------YGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--LAILL 162 (285)
T ss_dssp HHTTCHHHHHHHHHHCGGGGG------------------CSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC--CSTHH
T ss_pred HHcCCHHHHHHHHhcCCCCCc------------------cCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc--ccCCc
Confidence 999999999999999988654 67888 7999999999999999999999987521 22889
Q ss_pred CHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCH-HHHHHHhcC
Q 037129 183 TPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTA-LHAAAMRSY 226 (227)
Q Consensus 183 t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~-l~~a~~~~~ 226 (227)
||||+|+..++.+++++|+++|++++.++..|.|| ||+|+.+|+
T Consensus 163 t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~ 207 (285)
T 3kea_A 163 SCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKD 207 (285)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTC
T ss_pred cHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCC
Confidence 99999999999999999999999999999999998 999999886
No 24
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.4e-35 Score=215.55 Aligned_cols=179 Identities=19% Similarity=0.205 Sum_probs=162.1
Q ss_pred CHHHHHHHhcCCchHHHhhHhhhhccc-cccCCCCchhhhhhhhcccccccHHHHHHHHHhCCccccc-ccCCCCCHHHH
Q 037129 25 DPIFFNAAAAGNSEPFKDMAGEEIKSL-LTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQ-VNAKDDTPLHV 102 (227)
Q Consensus 25 ~~~l~~a~~~g~~~~v~~ll~~~~~~~-~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~g~tpl~~ 102 (227)
.+|||.|+..|+.++|++|++.+.+.. ..+..|.||||+| +..|+.+++++|++.+. ..+++. .+..|+||||+
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~~~--~~~~~~~~~~~g~t~L~~ 78 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWS--VSFQAHEITSFLLSKME--NVNLDDYPDDSGWTPFHI 78 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHTCT--TCCGGGCCCTTSCCHHHH
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHH--HHcCCHHHHHHHHhccc--cccccccCCCCCCCHHHH
Confidence 568999999999999999999888866 4888999999999 99999999999999632 244555 78899999999
Q ss_pred HHHcCCHHHHHHHHHhh--hcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccC
Q 037129 103 AAKFGHSDIVRFLVERA--KLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNY 180 (227)
Q Consensus 103 A~~~~~~~~v~~Ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~ 180 (227)
|+..|+.+++++|+++| ...+ ..+..|.||||+|+..++.+++++|++.|+++ +..+..
T Consensus 79 A~~~~~~~~~~~Ll~~g~~~~~~------------------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~ 139 (228)
T 2dzn_A 79 ACSVGNLEVVKSLYDRPLKPDLN------------------KITNQGVTCLHLAVGKKWFEVSQFLIENGASV-RIKDKF 139 (228)
T ss_dssp HHHHCCHHHHHHHHSSSSCCCTT------------------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTT
T ss_pred HHHcCCHHHHHHHHhCCCCcccc------------------cCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCc-cccCCC
Confidence 99999999999999998 4433 36788999999999999999999999999995 488899
Q ss_pred CCCHHHHHHHcCcHHHHHHHHhcC-CCCcccCCCCCCHHHHHHHhcC
Q 037129 181 GKTPLYMAAESRSSNMVLALLENR-TSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 181 ~~t~l~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
|.||||+|+..++.+++++|+++| ++++.+|..|.||||+|+.+|+
T Consensus 140 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~ 186 (228)
T 2dzn_A 140 NQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGH 186 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCC
Confidence 999999999999999999999999 9999999999999999999886
No 25
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1e-34 Score=226.92 Aligned_cols=202 Identities=18% Similarity=0.164 Sum_probs=158.9
Q ss_pred hhhhccCCHHHHHHHhcCCchHHHhhH--------hhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCccc
Q 037129 18 REIKQQMDPIFFNAAAAGNSEPFKDMA--------GEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLL 89 (227)
Q Consensus 18 ~~~~~~~~~~l~~a~~~g~~~~v~~ll--------~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~ 89 (227)
..+...+.+|||+|+..|+.+++++|+ +.|.+++..|..|.||||+| +..|+.+++++|++. +.++
T Consensus 119 ~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A--~~~g~~~iv~~Ll~~----ga~~ 192 (373)
T 2fo1_E 119 IIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLA--VLARRRRLVAYLMKA----GADP 192 (373)
T ss_dssp TCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCS
T ss_pred ccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHH--HHcChHHHHHHHHHC----CCCC
Confidence 334344566788888888888887776 56778888888888888888 888888888888875 6667
Q ss_pred ccccCCCCCHHHHHHHcCCHHHHHHHHHhh---hcccccchhhhhhHHH------------HHHHHH-------------
Q 037129 90 LQVNAKDDTPLHVAAKFGHSDIVRFLVERA---KLTQHENEELESRVGA------------AWQIIR------------- 141 (227)
Q Consensus 90 ~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~---~~~~~~~~~~~~~~~~------------~~~~~~------------- 141 (227)
+..+..|.||||+|+..|+.+++++|++++ ...+..+....+++.. ...++.
T Consensus 193 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 272 (373)
T 2fo1_E 193 TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 272 (373)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGT
T ss_pred cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccccccccc
Confidence 778888888888888888888888888876 3443333322222211 111111
Q ss_pred -hccCCCCcHHHHHHhcCCHHHHHHHHhcC-CCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHH
Q 037129 142 -MTNKEKNTALHEAVCHQNVDVVEILTKED-PDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALH 219 (227)
Q Consensus 142 -~~~~~~~t~l~~A~~~~~~~~~~~ll~~~-~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 219 (227)
..+..|.||||+|+..|+.+++++|++.+ .+ .+..+..|.||||+|+..|+.+++++|+++|++++.+|..|.|||+
T Consensus 273 ~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~-~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~ 351 (373)
T 2fo1_E 273 DSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN-KDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQ 351 (373)
T ss_dssp SSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHH
T ss_pred CcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC-ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHH
Confidence 13557899999999999999999999887 55 5588999999999999999999999999999999999999999999
Q ss_pred HHHHhcC
Q 037129 220 AAAMRSY 226 (227)
Q Consensus 220 ~a~~~~~ 226 (227)
+|+.+|+
T Consensus 352 ~A~~~g~ 358 (373)
T 2fo1_E 352 LAQANNH 358 (373)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 9999886
No 26
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=6.2e-36 Score=219.90 Aligned_cols=185 Identities=18% Similarity=0.176 Sum_probs=146.4
Q ss_pred cCCHHHHHHHhcCCchHHHhhHhhhh----ccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCC
Q 037129 23 QMDPIFFNAAAAGNSEPFKDMAGEEI----KSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDT 98 (227)
Q Consensus 23 ~~~~~l~~a~~~g~~~~v~~ll~~~~----~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t 98 (227)
.+.+|||.|+..|+.+++++|++.+. +++..+..|.||||+| +..|+.+++++|++. +.+++.++..|+|
T Consensus 7 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t 80 (236)
T 1ikn_D 7 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLA--VITNQPEIAEALLGA----GCDPELRDFRGNT 80 (236)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHH--HHTTCHHHHHCCCSC----CCCSCCCCTTCCC
T ss_pred CCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCCcCCCCCC
Confidence 34456888888888888888888554 5667888888999988 888888888888874 6777888888888
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccc
Q 037129 99 PLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSAN 178 (227)
Q Consensus 99 pl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~ 178 (227)
|||+|+..|+.+++++|++.|........ ++..+..|.||||+|+..|+.+++++|++.|+++. ..+
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~ 147 (236)
T 1ikn_D 81 PLHLACEQGCLASVGVLTQSCTTPHLHSI------------LKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN-AQE 147 (236)
T ss_dssp HHHHHHHHTCHHHHHHHHHSTTTTSSSCG------------GGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCC
T ss_pred HHHHHHHcCCHHHHHHHHhcccchhHHHH------------hhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCC
Confidence 99999888888888888888764321100 12356778889999888888888888888888855 555
Q ss_pred c-CCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 179 N-YGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 179 ~-~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
. .|.||||+|+..++.+++++|+++|++++.++..|.|||++|+.+|+
T Consensus 148 ~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 196 (236)
T 1ikn_D 148 PCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPS 196 (236)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCc
Confidence 4 88889999888888889998888888888888888889888887765
No 27
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.2e-34 Score=224.37 Aligned_cols=96 Identities=14% Similarity=0.024 Sum_probs=89.1
Q ss_pred CCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHH
Q 037129 24 MDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVA 103 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A 103 (227)
+.+|||.|+..|+.++|++|++.|.+++..+..|.||||+| +..|+.+++++|++. +.+++..+..|+||||+|
T Consensus 58 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~g~~~iv~~Ll~~----g~~~~~~~~~g~t~L~~A 131 (351)
T 3utm_A 58 KSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNA--CSYGHYEVTELLLKH----GACVNAMDLWQFTPLHEA 131 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHH--HHCCCHHHHHHHHHC----CCCCCCCCCCCCCHHHHH
Confidence 45679999999999999999999999999999999999999 999999999999986 777888999999999999
Q ss_pred HHcCCHHHHHHHHHhhhccccc
Q 037129 104 AKFGHSDIVRFLVERAKLTQHE 125 (227)
Q Consensus 104 ~~~~~~~~v~~Ll~~~~~~~~~ 125 (227)
+..|+.+++++|+++|......
T Consensus 132 ~~~~~~~~v~~Ll~~g~~~~~~ 153 (351)
T 3utm_A 132 ASKNRVEVCSLLLSHGADPTLV 153 (351)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHcCCHHHHHHHHHcCCCCccc
Confidence 9999999999999999876643
No 28
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=9.8e-35 Score=216.44 Aligned_cols=196 Identities=19% Similarity=0.167 Sum_probs=158.9
Q ss_pred CCHHHHHHHhcCCchHHHhhHh----hhhcccccc----CCCCchhhhhhhh---cccccccHHHHHHHHHhCC------
Q 037129 24 MDPIFFNAAAAGNSEPFKDMAG----EEIKSLLTA----KTENTILHINIIS---QERENVSTKFVAEILEKCP------ 86 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v~~ll~----~~~~~~~~~----~~g~t~L~~a~~~---~~~~~~~~~~l~~~~~~~~------ 86 (227)
..++||.|+..|+.+.|+.|++ .+.+++..+ ..|.||||+| + ..|+.+++++|++.....+
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A--~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 82 (260)
T 3jxi_A 5 NRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKA--LLNLSAGRNDTIPILLDIAEKTGNMREFI 82 (260)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHH--HTSCBTTBCTHHHHHHHHHHHTTCHHHHH
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHH--HHHhhcCCHHHHHHHHHhcccccchHhhh
Confidence 3468999999999997777776 788877555 5699999999 7 7899999999999876432
Q ss_pred -cccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHH
Q 037129 87 -LLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEI 165 (227)
Q Consensus 87 -~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ 165 (227)
..++..+..|+||||+|+..|+.+++++|+++|+..+........... .....+..|.||||+|+..|+.+++++
T Consensus 83 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~----~~~~~~~~g~tpL~~A~~~g~~~~v~~ 158 (260)
T 3jxi_A 83 NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPK----DEGGYFYFGELPLSLAACTNQPHIVHY 158 (260)
T ss_dssp TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSS----CCCCSCCSCSSHHHHHHHTTCHHHHHH
T ss_pred cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcc----cccccccCCCCHHHHHHHcCCHHHHHH
Confidence 334455668999999999999999999999999887652100000000 000001579999999999999999999
Q ss_pred HHh---cCCCCCcccccCCCCHHHHHHHcCc---------HHHHHHHHhcCCCC-------cccCCCCCCHHHHHHHhcC
Q 037129 166 LTK---EDPDYPYSANNYGKTPLYMAAESRS---------SNMVLALLENRTSV-------SHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 166 ll~---~~~~~~~~~~~~~~t~l~~A~~~~~---------~~~v~~Ll~~g~~~-------~~~~~~g~t~l~~a~~~~~ 226 (227)
|++ .|+++. .++..|.||||+|+..++ .+++++|+++|+++ +.+|..|.||||+|+.+|+
T Consensus 159 Ll~~~~~ga~~~-~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 237 (260)
T 3jxi_A 159 LTENGHKQADLR-RQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGK 237 (260)
T ss_dssp HHHCSSCCCCTT-CCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HHhccccCCCCc-ccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCC
Confidence 999 888854 889999999999998887 79999999999999 7799999999999999986
No 29
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.5e-35 Score=219.59 Aligned_cols=176 Identities=17% Similarity=0.168 Sum_probs=139.6
Q ss_pred CCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHH
Q 037129 24 MDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVA 103 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A 103 (227)
+.+|||+|+..|+.++|++|++.|.+++..+..|.||||+| +..++.+++++|++. +..++. +..|.||||+|
T Consensus 92 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~-~~~g~t~L~~A 164 (285)
T 3d9h_A 92 HVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNA--CVSGSWDCVNLLLQH----GASVQP-ESDLASPIHEA 164 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHH--HHHTCHHHHHHHHHT----TCCSSC-SCTTSCHHHHH
T ss_pred CCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH--HHcCHHHHHHHHHHC----CCCCCC-CCCCCCHHHHH
Confidence 45679999999999999999999999998999999999999 999999999999986 444443 34588999999
Q ss_pred HHcCCHHHHHHHHHhhhcccccchhhhhhHHHHH---------HHHH-----hccCCCCcHHHHHHhcCCHHHHHHHHhc
Q 037129 104 AKFGHSDIVRFLVERAKLTQHENEELESRVGAAW---------QIIR-----MTNKEKNTALHEAVCHQNVDVVEILTKE 169 (227)
Q Consensus 104 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~---------~~~~-----~~~~~~~t~l~~A~~~~~~~~~~~ll~~ 169 (227)
+..|+.+++++|+++|...+..+....+++.... .++. ..+..|.||||+|+..++.+++++|++.
T Consensus 165 ~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 244 (285)
T 3d9h_A 165 ARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLLMDF 244 (285)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 9999999999999988877765555444443221 1111 1367899999999999999999999999
Q ss_pred CCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhc-CCCCcc
Q 037129 170 DPDYPYSANNYGKTPLYMAAESRSSNMVLALLEN-RTSVSH 209 (227)
Q Consensus 170 ~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~-g~~~~~ 209 (227)
|+++ +.++..|.|||++|+ ++.+++++|+++ |+++..
T Consensus 245 gad~-~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~~ 282 (285)
T 3d9h_A 245 GADT-QAKNAEGKRPVELVP--PESPLAQLFLEREGASLPK 282 (285)
T ss_dssp TCCT-TCCCTTSCCGGGGSC--TTSHHHHHHHHHC------
T ss_pred CCCC-CCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCCC
Confidence 9995 489999999999998 557999999997 777754
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=217.13 Aligned_cols=177 Identities=21% Similarity=0.232 Sum_probs=137.1
Q ss_pred CHHHHHHHhcCCchHHHhhHhhhhc--------cccccCCCCchhhhhhhhcccccc-cHHHHHHHHHhCCcccccccCC
Q 037129 25 DPIFFNAAAAGNSEPFKDMAGEEIK--------SLLTAKTENTILHINIISQERENV-STKFVAEILEKCPLLLLQVNAK 95 (227)
Q Consensus 25 ~~~l~~a~~~g~~~~v~~ll~~~~~--------~~~~~~~g~t~L~~a~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~ 95 (227)
.++|+.||..|++++|++|++.+.+ ++..+..|.|||+.| +..+..+ +++.|++. +.++|.++..
T Consensus 12 ~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a--~~~~~~~~~v~~Ll~~----Gadvn~~d~~ 85 (269)
T 4b93_B 12 VEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQC--PKCAPAQKRLAKVPAS----GLGVNVTSQD 85 (269)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTCC------------------------------------------C----CCCTTCCCTT
T ss_pred hhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHH--HHhCCHHHHHHHHHHC----CCCCCCcCCC
Confidence 3579999999999999999986654 235667889999999 8776643 56666653 8889999999
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCc
Q 037129 96 DDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPY 175 (227)
Q Consensus 96 g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~ 175 (227)
|+||||+|+..|+.+++++|++.|+.... .+..|.||+++|+..++.+++++|++.|+++ +
T Consensus 86 G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~------------------~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n 146 (269)
T 4b93_B 86 GSSPLHVAALHGRADLIPLLLKHGANAGA------------------RNADQAVPLHLACQQGHFQVVKCLLDSNAKP-N 146 (269)
T ss_dssp SCCHHHHHHHTTCTTHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-C
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCCcCc------------------cCCCCCCccccccccChHHHHHHHHHCCCCC-C
Confidence 99999999999999999999999988664 6889999999999999999999999999995 4
Q ss_pred ccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 176 SANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 176 ~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.+|+
T Consensus 147 ~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~ 197 (269)
T 4b93_B 147 KKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKH 197 (269)
T ss_dssp CCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCC
Confidence 889999999999999999999999999999999999999999999999986
No 31
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.4e-34 Score=217.12 Aligned_cols=198 Identities=19% Similarity=0.138 Sum_probs=158.5
Q ss_pred ccCCHHHHHHHhcCCchHHHhhHhhh----hccc----cccCCCCchhhhhhhhcc---cccccHHHHHHHHHhCCc---
Q 037129 22 QQMDPIFFNAAAAGNSEPFKDMAGEE----IKSL----LTAKTENTILHINIISQE---RENVSTKFVAEILEKCPL--- 87 (227)
Q Consensus 22 ~~~~~~l~~a~~~g~~~~v~~ll~~~----~~~~----~~~~~g~t~L~~a~~~~~---~~~~~~~~l~~~~~~~~~--- 87 (227)
....++||.|+..|+.++|+.|++.+ .+++ ..+..|.||||+| +.. |+.+++++|++.+...+.
T Consensus 11 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A--~~~~~~g~~~~v~~Ll~~ga~~~~~~~ 88 (273)
T 2pnn_A 11 LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKA--MLNLHNGQNDTIALLLDVARKTDSLKQ 88 (273)
T ss_dssp CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHH--HHSCBTTBCHHHHHHHHHHHHTTCHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHH--HHHHhcCChHHHHHHHHhhccccchhH
Confidence 44567899999999999999999843 3332 3477999999999 765 999999999998754321
Q ss_pred ----ccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHH
Q 037129 88 ----LLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVV 163 (227)
Q Consensus 88 ----~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~ 163 (227)
.+...+..|+||||+|+..|+.+++++|+++|+..+........... .....+..|.||||+|+..|+.+++
T Consensus 89 ~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~----~~~~~~~~g~tpL~~A~~~g~~~~v 164 (273)
T 2pnn_A 89 FVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKT----KGRPGFYFGELPLSLAACTNQLAIV 164 (273)
T ss_dssp HHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSC----SSSCCCCSCBSHHHHHHHTTCHHHH
T ss_pred HhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccc----cccccccCCCCHHHHHHHcCCHHHH
Confidence 12235678999999999999999999999999887652210000000 0000113799999999999999999
Q ss_pred HHHHh---cCCCCCcccccCCCCHHHHHHHcCc---------HHHHHHHHhcCCCCc-------ccCCCCCCHHHHHHHh
Q 037129 164 EILTK---EDPDYPYSANNYGKTPLYMAAESRS---------SNMVLALLENRTSVS-------HEGPNGKTALHAAAMR 224 (227)
Q Consensus 164 ~~ll~---~~~~~~~~~~~~~~t~l~~A~~~~~---------~~~v~~Ll~~g~~~~-------~~~~~g~t~l~~a~~~ 224 (227)
++|++ .|+++. .++..|.||||+|+..++ .+++++|+++|++++ .+|..|.||||+|+.+
T Consensus 165 ~~Ll~~~~~gad~~-~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~ 243 (273)
T 2pnn_A 165 KFLLQNSWQPADIS-ARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASS 243 (273)
T ss_dssp HHHHHCSSCCCCTT-CCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred HHHHhcccCCCCce-eeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHh
Confidence 99999 888854 889999999999999988 899999999999996 5899999999999998
Q ss_pred cC
Q 037129 225 SY 226 (227)
Q Consensus 225 ~~ 226 (227)
|+
T Consensus 244 g~ 245 (273)
T 2pnn_A 244 GK 245 (273)
T ss_dssp TC
T ss_pred Ch
Confidence 86
No 32
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=9.1e-34 Score=213.38 Aligned_cols=199 Identities=18% Similarity=0.174 Sum_probs=163.6
Q ss_pred hccCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHH
Q 037129 21 KQQMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPL 100 (227)
Q Consensus 21 ~~~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl 100 (227)
...+.+|||.|+..|+.+++++|++.|.+++..+..|.||||+| +..|+.+++++|++. +.+++..+..|+|||
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L 109 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLA--AIAGSVKLLKLFLSK----GADVNECDFYGFTAF 109 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCBCTTCCBHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCccCcccCCHH
Confidence 34456789999999999999999999999999999999999999 999999999999986 677888899999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhcccccc----------hhhhhhHHH---------HHHHH-------HhccCCCCcHHHHH
Q 037129 101 HVAAKFGHSDIVRFLVERAKLTQHEN----------EELESRVGA---------AWQII-------RMTNKEKNTALHEA 154 (227)
Q Consensus 101 ~~A~~~~~~~~v~~Ll~~~~~~~~~~----------~~~~~~~~~---------~~~~~-------~~~~~~~~t~l~~A 154 (227)
|+|+..|+.+++++|+++|...+... ....+++.. ...++ +..+..|.||||+|
T Consensus 110 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a 189 (285)
T 1wdy_A 110 MEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHA 189 (285)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHH
T ss_pred HHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHH
Confidence 99999999999999999998776431 111111111 11112 23456788888888
Q ss_pred HhcCC----HHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHh-cCCCCcccCCCCCCHHHHHHHhcC
Q 037129 155 VCHQN----VDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLE-NRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 155 ~~~~~----~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
+..++ .+++++|++.|+++. ..+..|.||||+|+..++.+++++|++ .|++++.+|..|.||||+|+.+|+
T Consensus 190 ~~~~~~~~~~~i~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~ 265 (285)
T 1wdy_A 190 LLSSDDSDVEAITHLLLDHGADVN-VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKL 265 (285)
T ss_dssp HHCSCTTTHHHHHHHHHHTTCCSS-CCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHccccchHHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCc
Confidence 88888 888888888888844 778888999999999999999999998 789999999999999999988775
No 33
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.6e-34 Score=226.38 Aligned_cols=201 Identities=23% Similarity=0.248 Sum_probs=160.7
Q ss_pred hhhhccCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCC
Q 037129 18 REIKQQMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDD 97 (227)
Q Consensus 18 ~~~~~~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~ 97 (227)
..+.. +.+|||.|+..|+.++|++|++.|.+++..+..|.||||+| +..|+.+++++|++. +.+++.++..|+
T Consensus 9 ~~~~~-g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~ 81 (437)
T 1n11_A 9 GGGES-GLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMA--ARAGHTEVAKYLLQN----KAKVNAKAKDDQ 81 (437)
T ss_dssp -------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHH--HHHTCHHHHHHHHHH----TCCSSCCCTTSC
T ss_pred ccCCC-CCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHhC----CCCCCCCCCCCC
Confidence 33444 44569999999999999999999999998898999999999 999999999999987 677888999999
Q ss_pred CHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHH---------HHH------HhccCCCCcHHHHHHhcCCHHH
Q 037129 98 TPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAW---------QII------RMTNKEKNTALHEAVCHQNVDV 162 (227)
Q Consensus 98 tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~---------~~~------~~~~~~~~t~l~~A~~~~~~~~ 162 (227)
||||+|+..|+.+++++|+++|+.++.......+++.... .++ ...+..|.||||+|+..|+.++
T Consensus 82 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~ 161 (437)
T 1n11_A 82 TPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRV 161 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHH
T ss_pred CHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHH
Confidence 9999999999999999999999887665444333332221 111 1235567888888888888888
Q ss_pred HHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 163 VEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 163 ~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
+++|++.|+++ +..+..|.||||.|+..++.+++++|+++|++++..+..|.||||+|+.+|+
T Consensus 162 v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 224 (437)
T 1n11_A 162 AELLLERDAHP-NAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQ 224 (437)
T ss_dssp HHHHHHTTCCT-TCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHhCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCC
Confidence 88888888874 3677788888888888888888888888888888888888888888888765
No 34
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.4e-34 Score=227.24 Aligned_cols=196 Identities=22% Similarity=0.216 Sum_probs=153.3
Q ss_pred CCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHH
Q 037129 24 MDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVA 103 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A 103 (227)
..+||+.|+..|+.+++++|++.|.+++..+..|.||||+| +..++.+++++|++. +..++..+..|.||||+|
T Consensus 179 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~~~~Ll~~----g~~~~~~~~~g~t~L~~A 252 (437)
T 1n11_A 179 GLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIA--AKQNQVEVARSLLQY----GGSANAESVQGVTPLHLA 252 (437)
T ss_dssp CCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCCCCCCCCCHHHHH
Confidence 34567777887887888877777777777777777777777 777777777777764 555666777777777777
Q ss_pred HHcCCHHHHHHHHHhhhcccccchhhhhhHHHHH---------HH------HHhccCCCCcHHHHHHhcCCHHHHHHHHh
Q 037129 104 AKFGHSDIVRFLVERAKLTQHENEELESRVGAAW---------QI------IRMTNKEKNTALHEAVCHQNVDVVEILTK 168 (227)
Q Consensus 104 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~---------~~------~~~~~~~~~t~l~~A~~~~~~~~~~~ll~ 168 (227)
+..|+.+++++|+++|...+..+....+++.... .+ ++.++..|.||||+|+..|+.+++++|++
T Consensus 253 ~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 332 (437)
T 1n11_A 253 AQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQ 332 (437)
T ss_dssp HHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHH
T ss_pred HHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 7777777777777777665544433333322111 11 13467889999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 169 EDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 169 ~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
.|+++. .++..|.||||+|+..++.+++++|+++|++++..|.+|.|||++|+.+||
T Consensus 333 ~gad~n-~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~ 389 (437)
T 1n11_A 333 HQADVN-AKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGY 389 (437)
T ss_dssp TTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTC
T ss_pred cCCCCC-CCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCc
Confidence 999954 788999999999999999999999999999999999999999999999886
No 35
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=4.1e-34 Score=198.37 Aligned_cols=159 Identities=19% Similarity=0.119 Sum_probs=147.0
Q ss_pred cCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHH
Q 037129 23 QMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHV 102 (227)
Q Consensus 23 ~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~ 102 (227)
...++|+.|+..|+.+++++|++.|.+++..+..|.||||+| +. ++.+++++|++. +.+++.++..|+||||+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A--~~-~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~ 76 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVM--KL-GNPEIARRLLLR----GANPDLKDRTGFAVIHD 76 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHC--CS-SCHHHHHHHHHT----TCCTTCCCTTSCCHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHH--Hc-CcHHHHHHHHHc----CCCCCCCCCCCCCHHHH
Confidence 456789999999999999999999999999999999999999 88 999999999986 77788899999999999
Q ss_pred HHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCC
Q 037129 103 AAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGK 182 (227)
Q Consensus 103 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 182 (227)
|+..|+.+++++|+++|...+. ++..|.||||+|+..++.+++++|++.|++..+..+..|.
T Consensus 77 A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~ 138 (162)
T 1ihb_A 77 AARAGFLDTLQTLLEFQADVNI------------------EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGD 138 (162)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSC
T ss_pred HHHcCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCC
Confidence 9999999999999999987654 7889999999999999999999999999986668899999
Q ss_pred CHHHHHHHcCcHHHHHHHHhcCCC
Q 037129 183 TPLYMAAESRSSNMVLALLENRTS 206 (227)
Q Consensus 183 t~l~~A~~~~~~~~v~~Ll~~g~~ 206 (227)
||||+|+..++.+++++|+++|++
T Consensus 139 t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 139 TACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTC--
T ss_pred cHHHHHHHcCCHHHHHHHHHhCCC
Confidence 999999999999999999999986
No 36
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.9e-33 Score=217.68 Aligned_cols=197 Identities=20% Similarity=0.239 Sum_probs=157.3
Q ss_pred cCCHHHHHHHhcCCchHHHhhHh-hhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHH
Q 037129 23 QMDPIFFNAAAAGNSEPFKDMAG-EEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLH 101 (227)
Q Consensus 23 ~~~~~l~~a~~~g~~~~v~~ll~-~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~ 101 (227)
...++|+.|+..|+.+.|+.|+. .+.+++..|..|.||||+| +..|+.+++++|++. +.+++.++..|+||||
T Consensus 23 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~ 96 (351)
T 3utm_A 23 YKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLA--AGYNRVRIVQLLLQH----GADVHAKDKGGLVPLH 96 (351)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCCHHH
T ss_pred ccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCccCCCCCcHHH
Confidence 34567999999999999999998 4888888999999999999 999999999999986 7788899999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHH---------HHHH-------------------------------
Q 037129 102 VAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAW---------QIIR------------------------------- 141 (227)
Q Consensus 102 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~---------~~~~------------------------------- 141 (227)
+|+..|+.+++++|+++|...+..+....+++.... .++.
T Consensus 97 ~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~ 176 (351)
T 3utm_A 97 NACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYE 176 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhh
Confidence 999999999999999999887765444333332211 1111
Q ss_pred -----------------------------hccCCCCcHHHHHHhc---CCHHHHHHHHhcCCCCCcccccCCCCHHHHHH
Q 037129 142 -----------------------------MTNKEKNTALHEAVCH---QNVDVVEILTKEDPDYPYSANNYGKTPLYMAA 189 (227)
Q Consensus 142 -----------------------------~~~~~~~t~l~~A~~~---~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~ 189 (227)
..+..+.||||+|+.. +..+++++|++.|.++. ..+..|.||||+|+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~ 255 (351)
T 3utm_A 177 FKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVN-EKNKDFMTPLHVAA 255 (351)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTT-CCCTTCCCHHHHHH
T ss_pred hcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcC-CcCCCCCCHHHHHH
Confidence 1224566777777777 44677777777777743 66778888888888
Q ss_pred HcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 190 ESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 190 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
..++.+++++|+++|++++.+|..|.||||+|+.+|+
T Consensus 256 ~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~ 292 (351)
T 3utm_A 256 ERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGH 292 (351)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 8888888888888888888888888888888888775
No 37
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.4e-33 Score=217.70 Aligned_cols=194 Identities=21% Similarity=0.212 Sum_probs=136.2
Q ss_pred ccCCHHHHHHHhcCCchHHHhhHhhhhccccccC-CCCchhhhhhhhcccccccHHHHHHHHH-----------------
Q 037129 22 QQMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAK-TENTILHINIISQERENVSTKFVAEILE----------------- 83 (227)
Q Consensus 22 ~~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~-~g~t~L~~a~~~~~~~~~~~~~l~~~~~----------------- 83 (227)
...+++|+.|+..|++++|++|++.|++++..+. .|.||||+| +..|+.+++++|++.+.
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A--~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~ 100 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNA--VQMSREDIVELLLRHGADPVLRKKNGATPFILAA 100 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHH--HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHH--HHcCCHHHHHHHHHcCCchhhhccCCCchhHHHH
Confidence 3456789999999999999999999999996654 599999999 99999999999998632
Q ss_pred ------------hCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHH
Q 037129 84 ------------KCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTAL 151 (227)
Q Consensus 84 ------------~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l 151 (227)
..+.+++..+..|+||||+|+..|+.+++++|+++|+..+........ ....+..|.|||
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~--------~~~~~~~g~T~L 172 (337)
T 4g8k_A 101 IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKED--------QERLRKGGATAL 172 (337)
T ss_dssp HHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-------------CTTCSCCHH
T ss_pred hcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccc--------cccccCCCCcHH
Confidence 223456778889999999999999999999999999876542221100 111233344444
Q ss_pred HHHHhcCCHHHHHHHH--------------------------------------hcCCCCCcccccCCCCHHHHHHHcCc
Q 037129 152 HEAVCHQNVDVVEILT--------------------------------------KEDPDYPYSANNYGKTPLYMAAESRS 193 (227)
Q Consensus 152 ~~A~~~~~~~~~~~ll--------------------------------------~~~~~~~~~~~~~~~t~l~~A~~~~~ 193 (227)
|+|+..|+.+++++|+ +.|+++ +.++..|.||||+|+..++
T Consensus 173 ~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~-n~~d~~g~t~L~~a~~~~~ 251 (337)
T 4g8k_A 173 MDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRGERGKTPLILAVEKKH 251 (337)
T ss_dssp HHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCT-TCCCGGGCCHHHHHHHTTC
T ss_pred HHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHhhh
Confidence 4444444444444444 333332 2445566677777777777
Q ss_pred HHHHHHHHhc-CCCCcccCCCCCCHHHHHHHhcC
Q 037129 194 SNMVLALLEN-RTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 194 ~~~v~~Ll~~-g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
.+++++|++. |++++.+|..|.||||+|+.+|+
T Consensus 252 ~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~ 285 (337)
T 4g8k_A 252 LGLVQRLLEQEHIEINDTDSDGKTALLLAVELKL 285 (337)
T ss_dssp HHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred hHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCC
Confidence 7777777653 66777777777777777776665
No 38
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.2e-33 Score=208.81 Aligned_cols=196 Identities=18% Similarity=0.176 Sum_probs=164.9
Q ss_pred CCHHHHHHHhcCCchHHHhhHhhhhccccc-cCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHH
Q 037129 24 MDPIFFNAAAAGNSEPFKDMAGEEIKSLLT-AKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHV 102 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~-~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~ 102 (227)
+.++|+.|+..|++++|++|++.|.+++.. +..|.||||+| +..|+.+++++|++. +.+++.++..|.||||+
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~ 78 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNA--VQMSREDIVELLLRH----GADPVLRKKNGATPFLL 78 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCCHHHH
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHH--HHcCCHHHHHHHHHc----CCCCcccCCCCCCHHHH
Confidence 356899999999999999999999998866 77899999999 999999999999986 67788899999999999
Q ss_pred HHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHH---------HHHH----------------hccCCCCcHHHHHHhc
Q 037129 103 AAKFGHSDIVRFLVERAKLTQHENEELESRVGAAW---------QIIR----------------MTNKEKNTALHEAVCH 157 (227)
Q Consensus 103 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~---------~~~~----------------~~~~~~~t~l~~A~~~ 157 (227)
|+..|+.+++++|+++|...+..+....+++.... .++. ..+..|.||||+|+..
T Consensus 79 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 158 (285)
T 1wdy_A 79 AAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 158 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHc
Confidence 99999999999999999887765544443333221 1111 1156688999999999
Q ss_pred CCHHHHHHHHhc-CCCCCcccccCCCCHHHHHHHcCc----HHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 158 QNVDVVEILTKE-DPDYPYSANNYGKTPLYMAAESRS----SNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 158 ~~~~~~~~ll~~-~~~~~~~~~~~~~t~l~~A~~~~~----~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
|+.+++++|++. +.++ +..+..|.||||.|+..++ .+++++|+++|++++.++..|.||||+|+.+|+
T Consensus 159 ~~~~~v~~Ll~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 231 (285)
T 1wdy_A 159 GHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKH 231 (285)
T ss_dssp TCHHHHHHHHHTSCCCT-TCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHHHhcCCCC-CccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 999999999987 7764 4778889999999999888 889999999999999999999999999998876
No 39
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=5.3e-34 Score=219.19 Aligned_cols=190 Identities=14% Similarity=0.089 Sum_probs=148.3
Q ss_pred ccCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccc---cccHHHHHHHHHhCCcccccccCCCCC
Q 037129 22 QQMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERE---NVSTKFVAEILEKCPLLLLQVNAKDDT 98 (227)
Q Consensus 22 ~~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~g~t 98 (227)
..+.+|||+|+..|+.++|++|++.|.+++..+..|.||||+| +..|+ .++++.|++.+. ..++.++..|+|
T Consensus 129 ~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A--~~~g~~~~~~~~~~ll~~~~---~~~~~~d~~g~t 203 (327)
T 1sw6_A 129 EHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKA--VKSVNNYDSGTFEALLDYLY---PCLILEDSMNRT 203 (327)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHH--HHSSHHHHTTCHHHHHHHHG---GGGGEECTTCCC
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH--HHhcccccHHHHHHHHHhhh---ccccCCCCCCCC
Confidence 3455679999999999999999999999999999999999999 99988 899999999863 458889999999
Q ss_pred HHHHHHH----cCCHHHHHHHHHhhhcccccchh--hhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCC
Q 037129 99 PLHVAAK----FGHSDIVRFLVERAKLTQHENEE--LESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPD 172 (227)
Q Consensus 99 pl~~A~~----~~~~~~v~~Ll~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~ 172 (227)
|||+|+. .|+.+++++|++.+......... ............+.++..|.||||.|+. +++|++.+
T Consensus 204 pLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~~-- 275 (327)
T 1sw6_A 204 ILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIANM-- 275 (327)
T ss_dssp HHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHHT--
T ss_pred HHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHhC--
Confidence 9999999 99999999999986532110000 0000000011134578899999999995 88999885
Q ss_pred CCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhc
Q 037129 173 YPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRS 225 (227)
Q Consensus 173 ~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 225 (227)
.+.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|
T Consensus 276 -~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 276 -LNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp -TTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred -CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 3378899999999999999999999999999999999999999999999875
No 40
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=6.7e-34 Score=199.25 Aligned_cols=168 Identities=19% Similarity=0.125 Sum_probs=149.5
Q ss_pred CHHHHHHHhcCCchHHHhhHhhhhc-cccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHH
Q 037129 25 DPIFFNAAAAGNSEPFKDMAGEEIK-SLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVA 103 (227)
Q Consensus 25 ~~~l~~a~~~g~~~~v~~ll~~~~~-~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A 103 (227)
.++||.|+..|+.+.+++|++.+.+ ++..+..|.||||+| +..++.+++++|++. +.+++..+..|.||||+|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A 76 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWA--SAFGEIETVRFLLEW----GADPHILAKERESALSLA 76 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHH--HHTTCHHHHHHHHHH----TCCTTCCCTTCCCHHHHH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCchhhcccCCCHHHHH
Confidence 4579999999999999999998766 668888999999999 999999999999987 677888999999999999
Q ss_pred HHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCC
Q 037129 104 AKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKT 183 (227)
Q Consensus 104 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t 183 (227)
+..|+.+++++|+++|...+. .+..|.||||+|+..++.+++++|++.|+++ +..+..|.|
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t 137 (172)
T 3v30_A 77 STGGYTDIVGLLLERDVDINI------------------YDWNGGTPLLYAVRGNHVKCVEALLARGADL-TTEADSGYT 137 (172)
T ss_dssp HHTTCHHHHHHHHTTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCC
T ss_pred HHCCCHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCC
Confidence 999999999999999988654 7889999999999999999999999999995 478899999
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCH
Q 037129 184 PLYMAAESRSSNMVLALLENRTSVSHEGPNGKTA 217 (227)
Q Consensus 184 ~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 217 (227)
||++|+..++.+++++|+++|+++...+..|.||
T Consensus 138 ~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 138 PMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 9999999999999999999999999988888876
No 41
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=3.8e-33 Score=194.35 Aligned_cols=143 Identities=24% Similarity=0.341 Sum_probs=135.6
Q ss_pred chhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHH
Q 037129 59 TILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQ 138 (227)
Q Consensus 59 t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~ 138 (227)
+.|+.| +..|+.++|+.|++. +.+++.+|..|+||||+|+..++.+++++|++.|..++.
T Consensus 6 ~~L~~A--a~~G~~~~v~~Ll~~----Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~-------------- 65 (169)
T 4gpm_A 6 KRLIEA--AENGNKDRVKDLIEN----GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNA-------------- 65 (169)
T ss_dssp HHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC--------------
T ss_pred HHHHHH--HHcCCHHHHHHHHHC----CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhh--------------
Confidence 579999 999999999999986 788999999999999999999999999999999998765
Q ss_pred HHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHH
Q 037129 139 IIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTAL 218 (227)
Q Consensus 139 ~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 218 (227)
++..|.||||+|+..|+.+++++|++.|++++ .++..|+||||+|+..|+.+++++|+++|++++.+|..|.|||
T Consensus 66 ----~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn-~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL 140 (169)
T 4gpm_A 66 ----KDSDGRTPLHHAAENGHKEVVKLLISKGADVN-AKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPL 140 (169)
T ss_dssp ----CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred ----hccCCCCHHHHHHHcCCHHHHHHHHHCcCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 78999999999999999999999999999954 8899999999999999999999999999999999999999999
Q ss_pred HHHHHhcC
Q 037129 219 HAAAMRSY 226 (227)
Q Consensus 219 ~~a~~~~~ 226 (227)
++|+.+|+
T Consensus 141 ~~A~~~g~ 148 (169)
T 4gpm_A 141 DLAREHGN 148 (169)
T ss_dssp HHHHHTTC
T ss_pred HHHHHcCC
Confidence 99999886
No 42
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.3e-33 Score=203.56 Aligned_cols=176 Identities=20% Similarity=0.210 Sum_probs=114.1
Q ss_pred HHHHHHhcCCchHHHhhHhhhhccc-cccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHH
Q 037129 27 IFFNAAAAGNSEPFKDMAGEEIKSL-LTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAK 105 (227)
Q Consensus 27 ~l~~a~~~g~~~~v~~ll~~~~~~~-~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~ 105 (227)
+|+.|+..|+.++|++|++.+.+++ ..+..|.||||+| +..++.+++++|++. +.+++.++..|.||||+|+.
T Consensus 45 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~l~~A~~ 118 (240)
T 3eu9_A 45 LLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWA--TRQGHLSMVVQLMKY----GADPSLIDGEGCSCIHLAAQ 118 (240)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHH--HHcCCHHHHHHHHHc----CCCCcccCCCCCCHHHHHHH
Confidence 3444444444444444444444433 2222244444444 444444444444442 33344444444444444444
Q ss_pred cCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCC-HHHHHHHHhcCCCCCcccccCCCCH
Q 037129 106 FGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQN-VDVVEILTKEDPDYPYSANNYGKTP 184 (227)
Q Consensus 106 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~-~~~~~~ll~~~~~~~~~~~~~~~t~ 184 (227)
.|+.+++++|+++|...+ ..+..|.||||+|+..+. .+++++|++.++++.......|.||
T Consensus 119 ~~~~~~~~~Ll~~~~~~~------------------~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~ 180 (240)
T 3eu9_A 119 FGHTSIVAYLIAKGQDVD------------------MMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTA 180 (240)
T ss_dssp TTCHHHHHHHHHTTCCTT------------------CCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCH
T ss_pred cCHHHHHHHHHhcCCCcc------------------ccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcH
Confidence 444444444444444332 366788899999986655 7888888888888653333489999
Q ss_pred HHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 185 LYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 185 l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
||.|+..++.+++++|+++|++++.++..|.|||++|+.+|+
T Consensus 181 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 222 (240)
T 3eu9_A 181 LHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKN 222 (240)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCc
Confidence 999999999999999999999999999999999999999886
No 43
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=4.6e-33 Score=202.78 Aligned_cols=169 Identities=19% Similarity=0.178 Sum_probs=151.8
Q ss_pred cCCchHHHhhHhhhhcccc-ccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHH
Q 037129 34 AGNSEPFKDMAGEEIKSLL-TAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIV 112 (227)
Q Consensus 34 ~g~~~~v~~ll~~~~~~~~-~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v 112 (227)
.|+.+++++|++.|.+++. .+..|.||||+| +..|+.+++++|++. +.+++..+..|+||||+|+..|+.+++
T Consensus 1 gg~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~~~~~v 74 (223)
T 2f8y_A 1 GDAPAVISDFIYQGASLHNQTDRTGETALHLA--ARYSRSDAAKRLLEA----SADANIQDNMGRTPLHAAVSADAQGVF 74 (223)
T ss_dssp ----CCEETTEETTCCTTCCCTTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCcHHHHHHHHHcCCCcccccCCCCCchHHHH--HHcCCHHHHHHHHHc----CCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 3788999999999999874 478999999999 999999999999986 677888999999999999999999999
Q ss_pred HHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcC
Q 037129 113 RFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESR 192 (227)
Q Consensus 113 ~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~ 192 (227)
++|++.+.... +..+..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+..+
T Consensus 75 ~~Ll~~~~~~~-----------------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~ 136 (223)
T 2f8y_A 75 QILIRNRATDL-----------------DARMHDGTTPLILAARLAVEGMLEDLINSHADVN-AVDDLGKSALHWAAAVN 136 (223)
T ss_dssp HHHHHBTTSCT-----------------TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTSCBHHHHHHHTT
T ss_pred HHHHHcCCCCc-----------------ccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCc-CcCCCCCcHHHHHHHcC
Confidence 99999987322 2367889999999999999999999999999854 78889999999999999
Q ss_pred cHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 193 SSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 193 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
+.+++++|+++|++++.++..|.||||+|+.+|+
T Consensus 137 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 170 (223)
T 2f8y_A 137 NVDAAVVLLKNGANKDMQNNREETPLFLAAREGS 170 (223)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCC
Confidence 9999999999999999999999999999999876
No 44
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=212.20 Aligned_cols=176 Identities=20% Similarity=0.202 Sum_probs=160.2
Q ss_pred HHHHHHHhcCCchHHHhhHhhhhc--cccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCc-ccccccCCCCCHHHH
Q 037129 26 PIFFNAAAAGNSEPFKDMAGEEIK--SLLTAKTENTILHINIISQERENVSTKFVAEILEKCPL-LLLQVNAKDDTPLHV 102 (227)
Q Consensus 26 ~~l~~a~~~g~~~~v~~ll~~~~~--~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~g~tpl~~ 102 (227)
+++|.|+..|+++.++.+++.+.+ ++..|..|.||||+| +..|+.+++++|++. +. +++..+..|+||||+
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~~g~tpL~~ 151 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYS--VSHANFPVVQQLLDS----GVCKVDKQNRAGYSPIML 151 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----SCCCTTCCCTTSCCHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHH--HHCCCHHHHHHHHHC----CCCcCCCCCCCCCCHHHH
Confidence 346788999999999999986555 668999999999999 999999999999986 44 788899999999999
Q ss_pred HH-----HcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCccc
Q 037129 103 AA-----KFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSA 177 (227)
Q Consensus 103 A~-----~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~ 177 (227)
|+ ..++.+++++|++.|..... .+..|.||||+|+..|+.+++++|++.|+++. ..
T Consensus 152 a~~~~~~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n-~~ 212 (276)
T 4hbd_A 152 TALATLKTQDDIETVLQLFRLGNINAK------------------ASQAGQTALMLAVSHGRVDVVKALLACEADVN-VQ 212 (276)
T ss_dssp GGGCCCCSHHHHHHHHHHHHHSCTTCC------------------CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CC
T ss_pred HHHHHhhhhhhHHHHHHHHHcCCCccc------------------cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CC
Confidence 99 66889999999999976554 67889999999999999999999999999954 88
Q ss_pred ccCCCCHHHHHHHcCcHHHHHHHHh-cCCCCcccCCCCCCHHHHHHHhcC
Q 037129 178 NNYGKTPLYMAAESRSSNMVLALLE-NRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 178 ~~~~~t~l~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
+..|.||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+.+|+
T Consensus 213 d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~ 262 (276)
T 4hbd_A 213 DDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQ 262 (276)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCC
Confidence 9999999999999999999999999 899999999999999999999886
No 45
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=3.1e-32 Score=194.09 Aligned_cols=150 Identities=19% Similarity=0.125 Sum_probs=89.8
Q ss_pred cccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhh
Q 037129 52 LTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELES 131 (227)
Q Consensus 52 ~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 131 (227)
..|..|.||||+| +..|+.+++++|++. +.+++..+..|+||||+|+..|+.+++++|+++|...+.
T Consensus 30 ~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------- 96 (192)
T 2rfm_A 30 YRDSYNRTPLMVA--CMLGMENAIDKLVEN----FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT------- 96 (192)
T ss_dssp CCCTTCCCHHHHH--HHHTCGGGHHHHHHH----HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-------
T ss_pred CcCCCCCCHHHHH--HHcCCHHHHHHHHHh----ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCC-------
Confidence 4555666666666 666666666666654 334455555666666666666666666666666555432
Q ss_pred hHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccC
Q 037129 132 RVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEG 211 (227)
Q Consensus 132 ~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~ 211 (227)
.+..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+..++.+++++|+++|++++.+|
T Consensus 97 -----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 164 (192)
T 2rfm_A 97 -----------KDFSGKTPLMWSIIFGYSEMSYFLLEHGANVN-DRNLEGETPLIVASKYGRSEIVKKLLELGADISARD 164 (192)
T ss_dssp -----------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBC
T ss_pred -----------CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 45556666666666666666666666665532 555566666666666666666666666666666666
Q ss_pred CCCCCHHHHHHHhcC
Q 037129 212 PNGKTALHAAAMRSY 226 (227)
Q Consensus 212 ~~g~t~l~~a~~~~~ 226 (227)
..|.|||++|+.+|+
T Consensus 165 ~~g~t~l~~A~~~~~ 179 (192)
T 2rfm_A 165 LTGLTAEASARIFGR 179 (192)
T ss_dssp TTSCBHHHHHHHTTC
T ss_pred CCCCCHHHHHHHhCc
Confidence 666666666665554
No 46
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=2e-32 Score=191.22 Aligned_cols=158 Identities=21% Similarity=0.291 Sum_probs=145.2
Q ss_pred ccCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHH
Q 037129 22 QQMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLH 101 (227)
Q Consensus 22 ~~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~ 101 (227)
....++|+.|+..|+.++|++|++.|.+++..+..|.||||+| +..++.+++++|++. +.+++..+..|+||||
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~ 85 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLA--AFNGHLEIVEVLLKN----GADVNAVDHAGMTPLR 85 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHHH
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCccCCCCCCHHH
Confidence 3446689999999999999999999999999999999999999 999999999999986 6778889999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCC
Q 037129 102 VAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYG 181 (227)
Q Consensus 102 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~ 181 (227)
+|+..|+.+++++|+++|...+. .+..|.||||+|+..++.+++++|++.|+++ +..+..|
T Consensus 86 ~A~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g 146 (169)
T 2y1l_E 86 LAALFGHLEIVEVLLKNGADVNA------------------NDMEGHTPLHLAAMFGHLEIVEVLLKNGADV-NAQDKFG 146 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTS
T ss_pred HHHHcCCHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCC
Confidence 99999999999999999988654 6889999999999999999999999999995 4788999
Q ss_pred CCHHHHHHHcCcHHHHHHHHhcC
Q 037129 182 KTPLYMAAESRSSNMVLALLENR 204 (227)
Q Consensus 182 ~t~l~~A~~~~~~~~v~~Ll~~g 204 (227)
.|||++|+..++.+++++|++.|
T Consensus 147 ~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 147 KTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCHHHHHHHhCCHHHHHHHHHcC
Confidence 99999999999999999999876
No 47
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.9e-32 Score=199.68 Aligned_cols=176 Identities=22% Similarity=0.189 Sum_probs=159.3
Q ss_pred HHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccc-cccCCCCCHHHHHH
Q 037129 26 PIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLL-QVNAKDDTPLHVAA 104 (227)
Q Consensus 26 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~g~tpl~~A~ 104 (227)
++|+.|+..|+.+++++|++.|.+++..+..|.||||+| +..|+.+++++|++. +..++ ..+..|.||||+|+
T Consensus 11 ~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----~~~~~~~~~~~~~t~L~~A~ 84 (240)
T 3eu9_A 11 WDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWA--AINNRIDLVKYYISK----GAIVDQLGGDLNSTPLHWAT 84 (240)
T ss_dssp CCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCBTTTTBCHHHHHH
T ss_pred hHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHH--HHhCCHHHHHHHHHc----CCcchhhcCCcCCChhHHHH
Confidence 459999999999999999999999999999999999999 999999999999986 44444 34455999999999
Q ss_pred HcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCH
Q 037129 105 KFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTP 184 (227)
Q Consensus 105 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~ 184 (227)
..|+.+++++|++.|...+. .+..|.||||+|+..++.+++++|++.|+++. ..+..|.||
T Consensus 85 ~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~-~~~~~g~t~ 145 (240)
T 3eu9_A 85 RQGHLSMVVQLMKYGADPSL------------------IDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD-MMDQNGMTP 145 (240)
T ss_dssp HHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCH
T ss_pred HcCCHHHHHHHHHcCCCCcc------------------cCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc-ccCCCCCcH
Confidence 99999999999999988654 67889999999999999999999999999854 788899999
Q ss_pred HHHHHHcCc-HHHHHHHHhcCCCCcccCC-CCCCHHHHHHHhcC
Q 037129 185 LYMAAESRS-SNMVLALLENRTSVSHEGP-NGKTALHAAAMRSY 226 (227)
Q Consensus 185 l~~A~~~~~-~~~v~~Ll~~g~~~~~~~~-~g~t~l~~a~~~~~ 226 (227)
||.|+..+. .+++++|++.|++++..+. .|.||||+|+.+|+
T Consensus 146 l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~ 189 (240)
T 3eu9_A 146 LMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGN 189 (240)
T ss_dssp HHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTC
T ss_pred HHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCC
Confidence 999997665 8999999999999999997 89999999999876
No 48
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.3e-32 Score=202.24 Aligned_cols=178 Identities=21% Similarity=0.165 Sum_probs=157.8
Q ss_pred CCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhC--CcccccccCCCCCHHH
Q 037129 24 MDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKC--PLLLLQVNAKDDTPLH 101 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~g~tpl~ 101 (227)
+.+|||.|+..|+.++|++|++.|.+++..+..|.||||+| +..++.+++++|++..... ...++..+..|+||||
T Consensus 45 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~ 122 (236)
T 1ikn_D 45 QQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLA--CEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLH 122 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHH--HHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHH
Confidence 45679999999999999999999999999999999999999 9999999999999864321 2336778889999999
Q ss_pred HHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccC-CCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccC
Q 037129 102 VAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNK-EKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNY 180 (227)
Q Consensus 102 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~ 180 (227)
+|+..|+.+++++|+++|...+. .+. .|.||||+|+..|+.+++++|++.|+++ +..+..
T Consensus 123 ~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~ 183 (236)
T 1ikn_D 123 LASIHGYLGIVELLVSLGADVNA------------------QEPCNGRTALHLAVDLQNPDLVSLLLKCGADV-NRVTYQ 183 (236)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTC------------------CCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCS-CCCCTT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCC------------------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcccCC
Confidence 99999999999999999988765 565 8999999999999999999999999995 488999
Q ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCCCc--ccCCCCCCHHHHHH
Q 037129 181 GKTPLYMAAESRSSNMVLALLENRTSVS--HEGPNGKTALHAAA 222 (227)
Q Consensus 181 ~~t~l~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~g~t~l~~a~ 222 (227)
|.|||++|+..++.+++++|+++|++.. ..+..|.||.+.+.
T Consensus 184 g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 227 (236)
T 1ikn_D 184 GYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTES 227 (236)
T ss_dssp CCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC-
T ss_pred CCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhc
Confidence 9999999999999999999999999876 67778888765443
No 49
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=1.9e-32 Score=195.18 Aligned_cols=157 Identities=17% Similarity=0.075 Sum_probs=146.4
Q ss_pred cCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHH
Q 037129 23 QMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHV 102 (227)
Q Consensus 23 ~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~ 102 (227)
.+.+|||.|+..|+.+++++|++.+.+++..+..|.||||+| +..++.+++++|++. +.+++.++..|+||||+
T Consensus 34 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~ 107 (192)
T 2rfm_A 34 YNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWA--VKNNRLGIAEKLLSK----GSNVNTKDFSGKTPLMW 107 (192)
T ss_dssp TCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHH----TCCTTCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHH--HHcCCHHHHHHHHHC----CCCCCCCCCCCCcHHHH
Confidence 345679999999999999999999999999999999999999 999999999999997 67788899999999999
Q ss_pred HHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCC
Q 037129 103 AAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGK 182 (227)
Q Consensus 103 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 182 (227)
|+..|+.+++++|+++|...+. ++..|.||||+|+..++.+++++|++.|+++. ..+..|.
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~ 168 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANVND------------------RNLEGETPLIVASKYGRSEIVKKLLELGADIS-ARDLTGL 168 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSC------------------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTSC
T ss_pred HHHcCCHHHHHHHHHCCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCC
Confidence 9999999999999999988765 78899999999999999999999999999954 8899999
Q ss_pred CHHHHHHHcCcHHHHHHHHhcC
Q 037129 183 TPLYMAAESRSSNMVLALLENR 204 (227)
Q Consensus 183 t~l~~A~~~~~~~~v~~Ll~~g 204 (227)
|||++|+..++.+++++|+++|
T Consensus 169 t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 169 TAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp BHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999999999999875
No 50
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=2.1e-32 Score=190.74 Aligned_cols=160 Identities=16% Similarity=0.086 Sum_probs=144.8
Q ss_pred CCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHH
Q 037129 24 MDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVA 103 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A 103 (227)
..+|||.|+..|+.+++++|++.+.+++..+..|.||||+| +..++.+++++|++. +.+++..+..|.||||+|
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A 76 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWA--AAHGQIAVVEFLLQN----GADPQLLGKGRESALSLA 76 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCCHHHHH
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHH--HHCCCHHHHHHHHHc----CCCCCCcCCCCCcHHHHH
Confidence 45679999999999999999999998888999999999999 999999999999986 677888899999999999
Q ss_pred HHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCC
Q 037129 104 AKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKT 183 (227)
Q Consensus 104 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t 183 (227)
+..|+.+++++|+++|...+. .+..|.||||+|+..++.+++++|++.|+++ +..+..|.|
T Consensus 77 ~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t 137 (167)
T 3v31_A 77 CSKGYTDIVKMLLDCGVDVNE------------------YDWNGGTPLLYAVHGNHVKCVKMLLESGADP-TIETDSGYN 137 (167)
T ss_dssp HHHTCHHHHHHHHHHTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCC
T ss_pred HHcCCHHHHHHHHHCCCCCCc------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCC
Confidence 999999999999999988654 6888999999999999999999999999985 478899999
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCCCc
Q 037129 184 PLYMAAESRSSNMVLALLENRTSVS 208 (227)
Q Consensus 184 ~l~~A~~~~~~~~v~~Ll~~g~~~~ 208 (227)
||++|+..++.+++++|++++.++.
T Consensus 138 ~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 138 SMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999876543
No 51
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.9e-32 Score=213.12 Aligned_cols=214 Identities=17% Similarity=0.182 Sum_probs=164.5
Q ss_pred CcccccccccchhhhccCCHHHHHHHhcCCchHHHhhHhhhhcccccc-CCCCchhhhhhhhcccccccHHHHHHH----
Q 037129 7 EIEEAPLLDSNREIKQQMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTA-KTENTILHINIISQERENVSTKFVAEI---- 81 (227)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~-~~g~t~L~~a~~~~~~~~~~~~~l~~~---- 81 (227)
+++..+......++..+ .++||.|+..| .++++.|+..+++ ..+ ..|.||||+| +..|+.+++++|+..
T Consensus 78 ~~~~~~~~~~~~~~~~g-~t~L~~Aa~~~-~~~~~~L~~~~~n--~~d~~~g~t~Lh~A--a~~g~~~~v~~Ll~~~~~~ 151 (373)
T 2fo1_E 78 DFNHTNLQIPTEPEPES-PIKLHTEAAGS-YAITEPITRESVN--IIDPRHNRTVLHWI--ASNSSAEKSEDLIVHEAKE 151 (373)
T ss_dssp ----------------C-CCHHHHHHHSS-SCCCSCCSTTTTT--TCCCSSCCCHHHHH--HCTTCCSCCTTHHHHHHHH
T ss_pred cccccccccccCCCCCC-ccHHHHHhcCC-chHHHHhcccccc--ccCCcCCCCHHHHH--HHCCCHHHHHHHHHHHHHH
Confidence 33444444444444444 55699999955 5888888765444 666 7899999999 999999999998742
Q ss_pred HHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHH------------------HHHHhc
Q 037129 82 LEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAW------------------QIIRMT 143 (227)
Q Consensus 82 ~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~ 143 (227)
+...+.+++.+|..|+||||+|+..|+.+++++|+++|+..+..+....+++.... ..++..
T Consensus 152 ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~ 231 (373)
T 2fo1_E 152 CIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEEL 231 (373)
T ss_dssp HHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCC
T ss_pred HHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhc
Confidence 33568889999999999999999999999999999999988765554444433221 122345
Q ss_pred cCCCCcHHHHHHhcC---CHHHHHHHHhcCCCCCc-------ccccCCCCHHHHHHHcCcHHHHHHHHhcC-CCCcccCC
Q 037129 144 NKEKNTALHEAVCHQ---NVDVVEILTKEDPDYPY-------SANNYGKTPLYMAAESRSSNMVLALLENR-TSVSHEGP 212 (227)
Q Consensus 144 ~~~~~t~l~~A~~~~---~~~~~~~ll~~~~~~~~-------~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g-~~~~~~~~ 212 (227)
+..|.||||+|+..+ +.+++++|++.|+++.. ..+..|.||||+|+..++.+++++|+++| ++++.+|.
T Consensus 232 d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~ 311 (373)
T 2fo1_E 232 DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDE 311 (373)
T ss_dssp CTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCT
T ss_pred CCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCC
Confidence 788999999999988 89999999999988642 25668999999999999999999999876 99999999
Q ss_pred CCCCHHHHHHHhcC
Q 037129 213 NGKTALHAAAMRSY 226 (227)
Q Consensus 213 ~g~t~l~~a~~~~~ 226 (227)
.|.||||+|+.+|+
T Consensus 312 ~g~TpL~~A~~~g~ 325 (373)
T 2fo1_E 312 DGKTPIMLAAQEGR 325 (373)
T ss_dssp TCCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCC
Confidence 99999999999886
No 52
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.98 E-value=1.7e-31 Score=206.02 Aligned_cols=201 Identities=13% Similarity=0.069 Sum_probs=157.2
Q ss_pred hhhhccCCHHHHHHHhcCCchHHHhhHhhhhccc---------------------------------cccCCCCchhhhh
Q 037129 18 REIKQQMDPIFFNAAAAGNSEPFKDMAGEEIKSL---------------------------------LTAKTENTILHIN 64 (227)
Q Consensus 18 ~~~~~~~~~~l~~a~~~g~~~~v~~ll~~~~~~~---------------------------------~~~~~g~t~L~~a 64 (227)
..+...+.+|||+|+..|+.++|++|++.|.+++ ..+..|.||||+|
T Consensus 53 ~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A 132 (337)
T 4g8k_A 53 FQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEA 132 (337)
T ss_dssp CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHH
T ss_pred ccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHH
Confidence 3444556678999999999999999999776543 4567889999999
Q ss_pred hhhcccccccHHHHHHHHHhCC------cccccccCCCCCHHHHHHHcCCHHHHHHHHHh-hhcccccchhhhhhHHH--
Q 037129 65 IISQERENVSTKFVAEILEKCP------LLLLQVNAKDDTPLHVAAKFGHSDIVRFLVER-AKLTQHENEELESRVGA-- 135 (227)
Q Consensus 65 ~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~-- 135 (227)
+..++.++++++++.+.... ......+..|.||||+|+..|+.+++++|+++ |..++..+.........
T Consensus 133 --~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~ 210 (337)
T 4g8k_A 133 --AVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL 210 (337)
T ss_dssp --HHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHH
T ss_pred --HHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHH
Confidence 99999999999998632111 11223456789999999999999999999965 77666544433222211
Q ss_pred ----------HHHH-------HHhccCCCCcHHHHHHhcCCHHHHHHHHhc-CCCCCcccccCCCCHHHHHHHcCcHHHH
Q 037129 136 ----------AWQI-------IRMTNKEKNTALHEAVCHQNVDVVEILTKE-DPDYPYSANNYGKTPLYMAAESRSSNMV 197 (227)
Q Consensus 136 ----------~~~~-------~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~-~~~~~~~~~~~~~t~l~~A~~~~~~~~v 197 (227)
...+ ++.++..|.||||+|+..++.++++.|++. +.+ .+.++..|.||||+|+..|+.+++
T Consensus 211 ~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~-vn~~d~~G~TpL~~A~~~g~~~iv 289 (337)
T 4g8k_A 211 LSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE-INDTDSDGKTALLLAVELKLKKIA 289 (337)
T ss_dssp HHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCC-TTCBCTTSCBHHHHHHHTTCHHHH
T ss_pred HHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCc-ccCcCCCCCCHHHHHHHcCCHHHH
Confidence 1111 234677899999999999999999999986 566 458899999999999999999999
Q ss_pred HHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 198 LALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 198 ~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
++|+++|++++.+ +||++|+.+|+
T Consensus 290 ~~Ll~~GAd~n~~-----~~L~~A~~~~~ 313 (337)
T 4g8k_A 290 ELLCKRGASTDCG-----DLVMTARRNYD 313 (337)
T ss_dssp HHHHTTSCSSTTC-----CHHHHHHHTTC
T ss_pred HHHHHCCCCCCCC-----CHHHHHHHcCC
Confidence 9999999999764 69999999886
No 53
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.98 E-value=3.1e-31 Score=184.77 Aligned_cols=146 Identities=23% Similarity=0.254 Sum_probs=137.4
Q ss_pred CCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHH
Q 037129 56 TENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGA 135 (227)
Q Consensus 56 ~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 135 (227)
.|.||||.| +..|+.+++++|++. +..++.++..|+||||+|+..|+.+++++|+++|...+.
T Consensus 2 ~~~t~L~~A--~~~g~~~~v~~ll~~----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----------- 64 (167)
T 3v31_A 2 ANSLSVHQL--AAQGEMLYLATRIEQ----ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL----------- 64 (167)
T ss_dssp TTCCCHHHH--HHTTCHHHHHHHHHH----SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-----------
T ss_pred CCcchHHHH--HHCCCHHHHHHHHHc----CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-----------
Confidence 578999999 999999999999987 677889999999999999999999999999999988654
Q ss_pred HHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCC
Q 037129 136 AWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGK 215 (227)
Q Consensus 136 ~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 215 (227)
.+..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+..++.+++++|+++|++++.++..|.
T Consensus 65 -------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 136 (167)
T 3v31_A 65 -------LGKGRESALSLACSKGYTDIVKMLLDCGVDVN-EYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGY 136 (167)
T ss_dssp -------CCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred -------cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 67899999999999999999999999999954 7889999999999999999999999999999999999999
Q ss_pred CHHHHHHHhcC
Q 037129 216 TALHAAAMRSY 226 (227)
Q Consensus 216 t~l~~a~~~~~ 226 (227)
|||++|+.+|+
T Consensus 137 t~l~~A~~~~~ 147 (167)
T 3v31_A 137 NSMDLAVALGY 147 (167)
T ss_dssp CHHHHHHHHTC
T ss_pred CHHHHHHHcCc
Confidence 99999999886
No 54
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.98 E-value=7.3e-32 Score=190.10 Aligned_cols=165 Identities=21% Similarity=0.183 Sum_probs=152.0
Q ss_pred CHHHHHHHhcCCchHHHhhHhh-hhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHH
Q 037129 25 DPIFFNAAAAGNSEPFKDMAGE-EIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVA 103 (227)
Q Consensus 25 ~~~l~~a~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A 103 (227)
.++|+.|+..|+.+.|++|++. +.+++..+..|.||||+| +..++.+++++|++. +.+++..+..|+||||+|
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A 79 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWA--CREGRSAVVEMLIMR----GARINVMNRGDDTPLHLA 79 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCCHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHH--HHcCcHHHHHHHHHc----CCCCCCcCCCCCCHHHHH
Confidence 3459999999999999999996 667778999999999999 999999999999986 778889999999999999
Q ss_pred HHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCC
Q 037129 104 AKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKT 183 (227)
Q Consensus 104 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t 183 (227)
+..|+.+++++|+++|...+. .+..|.||||+|+..++.+++++|++.|+++ +..+..|.|
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~------------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t 140 (179)
T 3f6q_A 80 ASHGHRDIVQKLLQYKADINA------------------VNEHGNVPLHYACFWGQDQVAEDLVANGALV-SICNKYGEM 140 (179)
T ss_dssp HHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-SBCCTTSCC
T ss_pred HHcCCHHHHHHHHHcCCCCCc------------------cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-chhccCCCC
Confidence 999999999999999988664 7889999999999999999999999999995 488999999
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCCCcccCCCC
Q 037129 184 PLYMAAESRSSNMVLALLENRTSVSHEGPNG 214 (227)
Q Consensus 184 ~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 214 (227)
||++|+..++.+++++|+++|++++..+..+
T Consensus 141 pl~~A~~~~~~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 141 PVDKAKAPLRELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp GGGGSCHHHHHHHHHHHHHTTCCCSCBCCCC
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCcccCCccc
Confidence 9999999999999999999999999877655
No 55
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=2.8e-31 Score=194.46 Aligned_cols=165 Identities=21% Similarity=0.184 Sum_probs=143.7
Q ss_pred CCHHHHHHHhcCCchHHHhhHhhhhcc-----ccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccC----
Q 037129 24 MDPIFFNAAAAGNSEPFKDMAGEEIKS-----LLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNA---- 94 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v~~ll~~~~~~-----~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---- 94 (227)
+.+|||.|+..|+.+++++|++.|.++ +..+..|.||||+| +..|+.+++++|++. +.+++..+.
T Consensus 37 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~~~~ 110 (232)
T 2rfa_A 37 GETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA--VINQNVNLVRALLAR----GASVSARATGSVF 110 (232)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCCSGGG
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHH--HHcCCHHHHHHHHhC----CCCCCcccCCcce
Confidence 455799999999999999999988876 45677899999999 999999999999986 555665544
Q ss_pred ---------CCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHH--
Q 037129 95 ---------KDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVV-- 163 (227)
Q Consensus 95 ---------~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~-- 163 (227)
.|+||||+|+..|+.+++++|+++|+..+. ++..|.||||+|+..++.+++
T Consensus 111 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------------------~d~~g~t~L~~A~~~~~~~~~~~ 172 (232)
T 2rfa_A 111 HYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA------------------QDSLGNTVLHILILQPNKTFACQ 172 (232)
T ss_dssp SCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHTCSCHHHHHH
T ss_pred eecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------------------CCCCCCCHHHHHHHcCChHHHHH
Confidence 799999999999999999999999988665 789999999999999999988
Q ss_pred --HHHHhcCCCCC-----cccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCC
Q 037129 164 --EILTKEDPDYP-----YSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGP 212 (227)
Q Consensus 164 --~~ll~~~~~~~-----~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 212 (227)
++|++.|++.. +..+..|.||||+|+..|+.+++++|+++|........
T Consensus 173 i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~~~ 228 (232)
T 2rfa_A 173 MYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAAHH 228 (232)
T ss_dssp HHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC-----
T ss_pred HHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchhhhc
Confidence 99999998754 57889999999999999999999999999977765443
No 56
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=7.6e-31 Score=188.09 Aligned_cols=157 Identities=20% Similarity=0.161 Sum_probs=144.6
Q ss_pred CCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHH
Q 037129 24 MDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVA 103 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A 103 (227)
+.+|||.|+..|+.++|++|++.|.+++..+..|.||||+| +..++.+++++|++. .+.+++..+..|.||||+|
T Consensus 39 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A--~~~~~~~~~~~Ll~~---~~~~~~~~~~~g~t~L~~A 113 (201)
T 3hra_A 39 GNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYA--GAQGRTEILAYMLKH---ATPDLNKHNRYGGNALIPA 113 (201)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHH---SCCCTTCCCTTSCCSHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHhc---cCcccccccCCCCcHHHHH
Confidence 45679999999999999999999999999999999999999 999999999999964 3667888999999999999
Q ss_pred HHcCCHHHHHHHHHhh-hcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCC-----HHHHHHHHhcCCCCCccc
Q 037129 104 AKFGHSDIVRFLVERA-KLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQN-----VDVVEILTKEDPDYPYSA 177 (227)
Q Consensus 104 ~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~-----~~~~~~ll~~~~~~~~~~ 177 (227)
+..|+.+++++|+++| ...+. ++..|.||||+|+..+. .+++++|++.|+++ +..
T Consensus 114 ~~~~~~~~v~~Ll~~g~~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~-~~~ 174 (201)
T 3hra_A 114 AEKGHIDNVKLLLEDGREDIDF------------------QNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQ-SIK 174 (201)
T ss_dssp HHTTCHHHHHHHHHHCCCCTTC------------------CCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCT-TCC
T ss_pred HHcCCHHHHHHHHHcCCCCcCC------------------CCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCC-Ccc
Confidence 9999999999999999 55443 78899999999999988 99999999999995 488
Q ss_pred ccCCCCHHHHHHHcCcHHHHHHHHhcC
Q 037129 178 NNYGKTPLYMAAESRSSNMVLALLENR 204 (227)
Q Consensus 178 ~~~~~t~l~~A~~~~~~~~v~~Ll~~g 204 (227)
+..|.||||+|+..++.+++++|+++|
T Consensus 175 ~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 175 DNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 999999999999999999999999987
No 57
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=6.4e-31 Score=180.64 Aligned_cols=150 Identities=25% Similarity=0.290 Sum_probs=113.0
Q ss_pred CHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHH
Q 037129 25 DPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAA 104 (227)
Q Consensus 25 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~ 104 (227)
.++|+.|+..|+.++|++|++.|.+++ .+..|.||||+| +..|+.+++++|++. +.+++.++..|+||||+|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~ 75 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLA--AQYGHFSTTEVLLRA----GVSRDARTKVDRTPLHMAA 75 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHH--HHHTCHHHHHHHHTT----TCCTTCCCTTCCCHHHHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCCCCCCCCCHHHHHH
Confidence 356788888888888888888777654 455777888888 777888877777764 5666777777888888888
Q ss_pred HcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCH
Q 037129 105 KFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTP 184 (227)
Q Consensus 105 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~ 184 (227)
..|+.+++++|+++|...+. ++..|.||||+|+..++.+++++|++.|+++. ..+..|.||
T Consensus 76 ~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~ 136 (153)
T 1awc_B 76 SEGHANIVEVLLKHGADVNA------------------KDMLKMTALHWATEHNHQEVVELLIKYGADVH-TQSKFCKTA 136 (153)
T ss_dssp HHTCHHHHHHHHTTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCH
T ss_pred HcChHHHHHHHHHcCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCH
Confidence 88888888888877776543 56777788888888788888888887777743 667777788
Q ss_pred HHHHHHcCcHHHHHHH
Q 037129 185 LYMAAESRSSNMVLAL 200 (227)
Q Consensus 185 l~~A~~~~~~~~v~~L 200 (227)
|++|+..++.+++++|
T Consensus 137 l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 137 FDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 8888888887777765
No 58
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=6.8e-32 Score=210.37 Aligned_cols=153 Identities=18% Similarity=0.147 Sum_probs=112.0
Q ss_pred ccCCCCchhhhhhhhccc--ccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhh
Q 037129 53 TAKTENTILHINIISQER--ENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELE 130 (227)
Q Consensus 53 ~~~~g~t~L~~a~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 130 (227)
.+..|.||||+| +..| +.+++++|++. +.+++..+..|+||||+|+..|+.+++++|+++|.......
T Consensus 134 ~~~~g~t~L~~A--~~~g~~~~~~v~~Ll~~----ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~---- 203 (364)
T 3ljn_A 134 KHCKGQTALHWC--VGLGPEYLEMIKILVQL----GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLR---- 203 (364)
T ss_dssp EEESCCCHHHHH--HHSCGGGHHHHHHHHHH----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCC----
T ss_pred CCCCCCCHHHHH--HHcCCchHHHHHHHHHc----CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccccc----
Confidence 555666666666 6666 66666666665 45556666666666666666666666666666665511000
Q ss_pred hhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcc-
Q 037129 131 SRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSH- 209 (227)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~- 209 (227)
++..+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..++.+++++|+++|++++.
T Consensus 204 ---------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~ 273 (364)
T 3ljn_A 204 ---------LDYANKQGNSHLHWAILINWEDVAMRFVEMGIDV-NMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQ 273 (364)
T ss_dssp ---------TTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHH
T ss_pred ---------ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhh
Confidence 1236788999999999999999999999999995 48899999999999999999999999999877644
Q ss_pred -----------cCCCCCCHHHHHHHhc
Q 037129 210 -----------EGPNGKTALHAAAMRS 225 (227)
Q Consensus 210 -----------~~~~g~t~l~~a~~~~ 225 (227)
.+..+.||++.|+..|
T Consensus 274 ~~~~~~~~~~~~~~~~~~~l~~aa~~~ 300 (364)
T 3ljn_A 274 ACPYHNGTTVLPDRVVWLDFVPAAADP 300 (364)
T ss_dssp TCTTBSSSSBCGGGCCCCTTSCSSCCH
T ss_pred cCcccCcccccccccccccchhhhhcc
Confidence 3445677776665544
No 59
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=2.1e-31 Score=199.81 Aligned_cols=173 Identities=18% Similarity=0.163 Sum_probs=141.9
Q ss_pred ccCCHHHHHHHhc---CCchHHHhhHhhhhcc-------c----cccCCCCchhhhhhhhcccccccHHHHHHHHHhCCc
Q 037129 22 QQMDPIFFNAAAA---GNSEPFKDMAGEEIKS-------L----LTAKTENTILHINIISQERENVSTKFVAEILEKCPL 87 (227)
Q Consensus 22 ~~~~~~l~~a~~~---g~~~~v~~ll~~~~~~-------~----~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~ 87 (227)
..+.+|||+|+.. |+.++|++|++.|.++ + ..+..|.||||+| +..|+.+++++|++. +.
T Consensus 52 ~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A--~~~g~~~~v~~Ll~~----ga 125 (273)
T 2pnn_A 52 ETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIA--IERRNMTLVTLLVEN----GA 125 (273)
T ss_dssp TTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHH--HHTTCHHHHHHHHHT----TC
T ss_pred cCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHH--HHcCCHHHHHHHHHC----CC
Confidence 4566789999987 9999999999987542 2 2556899999999 999999999999986 67
Q ss_pred ccccccC--------------CCCCHHHHHHHcCCHHHHHHHHH---hhhcccccchhhhhhHHHHHHHHHhccCCCCcH
Q 037129 88 LLLQVNA--------------KDDTPLHVAAKFGHSDIVRFLVE---RAKLTQHENEELESRVGAAWQIIRMTNKEKNTA 150 (227)
Q Consensus 88 ~~~~~~~--------------~g~tpl~~A~~~~~~~~v~~Ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 150 (227)
+++..+. .|+||||+|+..|+.+++++|++ .|...+. ++..|.||
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~------------------~d~~g~tp 187 (273)
T 2pnn_A 126 DVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISA------------------RDSVGNTV 187 (273)
T ss_dssp CTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC------------------CCTTSCCH
T ss_pred CcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCcee------------------eCCCCCcH
Confidence 7787776 79999999999999999999999 8887654 78999999
Q ss_pred HHHHHhcCC---------HHHHHHHHhcCCCCC------cccccCCCCHHHHHHHcCcHHHHHHHHhcCC-CCcccCCCC
Q 037129 151 LHEAVCHQN---------VDVVEILTKEDPDYP------YSANNYGKTPLYMAAESRSSNMVLALLENRT-SVSHEGPNG 214 (227)
Q Consensus 151 l~~A~~~~~---------~~~~~~ll~~~~~~~------~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g 214 (227)
||+|+..++ .+++++|++.|+++. ...+..|.||||+|+..|+.+++++|+++|+ ++......+
T Consensus 188 Lh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~ 267 (273)
T 2pnn_A 188 LHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAA 267 (273)
T ss_dssp HHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC---------
T ss_pred HHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhh
Confidence 999999888 799999999998864 2588999999999999999999999999998 888777766
Q ss_pred CCHH
Q 037129 215 KTAL 218 (227)
Q Consensus 215 ~t~l 218 (227)
.+|-
T Consensus 268 ~~~~ 271 (273)
T 2pnn_A 268 HHHH 271 (273)
T ss_dssp ----
T ss_pred hhcc
Confidence 6654
No 60
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=1.8e-31 Score=201.39 Aligned_cols=164 Identities=14% Similarity=0.118 Sum_probs=151.0
Q ss_pred cCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCC-CCHHH
Q 037129 23 QMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKD-DTPLH 101 (227)
Q Consensus 23 ~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g-~tpl~ 101 (227)
.+.+|||.|+..|+.++|++|++.|.+++..+..|.||||+| +..|+.+++++|++. +.+++.++..| .||||
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~----ga~~~~~~~~g~~t~L~ 134 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYA--VDSGNMQTVKLFVKK----NWRLMFYGKTGWKTSFY 134 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHH----CGGGGGCSSSGGGSHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHH--HHcCCHHHHHHHHhc----CCCCCccCCCCCCCHHH
Confidence 357789999999999999999999999999999999999999 999999999999997 77888999999 79999
Q ss_pred HHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCC
Q 037129 102 VAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYG 181 (227)
Q Consensus 102 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~ 181 (227)
+|+..|+.+++++|+++|..... ...|.||||+|+..|+.+++++|++.|+++. ..+..|
T Consensus 135 ~A~~~~~~~~v~~Ll~~g~~~~~-------------------~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n-~~~~~g 194 (285)
T 3kea_A 135 HAVMLNDVSIVSYFLSEIPSTFD-------------------LAILLSCIHITIKNGHVDMMILLLDYMTSTN-TNNSLL 194 (285)
T ss_dssp HHHHTTCHHHHHHHHTTSCTTCC-------------------CSTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-TTCCCB
T ss_pred HHHHcCCHHHHHHHHhCCCcccc-------------------ccCCccHHHHHHHcChHHHHHHHHHcCCCCC-cccCCC
Confidence 99999999999999999876521 2388999999999999999999999999854 788899
Q ss_pred CCH-HHHHHHcCcHHHHHHHHhcCCCCcccCC
Q 037129 182 KTP-LYMAAESRSSNMVLALLENRTSVSHEGP 212 (227)
Q Consensus 182 ~t~-l~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 212 (227)
.|| ||+|+..++.+++++|+++|++++..+.
T Consensus 195 ~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~ 226 (285)
T 3kea_A 195 FIPDIKLAIDNKDIEMLQALFKYDINIYSANL 226 (285)
T ss_dssp CCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG
T ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh
Confidence 997 9999999999999999999999999874
No 61
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=1.4e-30 Score=181.79 Aligned_cols=148 Identities=24% Similarity=0.259 Sum_probs=136.9
Q ss_pred cCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhH
Q 037129 54 AKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRV 133 (227)
Q Consensus 54 ~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 133 (227)
...+.++|+.| +..|+.+++++|++. +.+++.++..|+||||+|+..|+.+++++|+++|...+.
T Consensus 11 ~~~~~~~l~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--------- 75 (169)
T 2y1l_E 11 GSDLGKKLLEA--ARAGRDDEVRILMAN----GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNA--------- 75 (169)
T ss_dssp --CHHHHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC---------
T ss_pred CCcccchHHHH--HHcCCHHHHHHHHHC----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc---------
Confidence 34567999999 999999999999986 677888999999999999999999999999999987654
Q ss_pred HHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCC
Q 037129 134 GAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPN 213 (227)
Q Consensus 134 ~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 213 (227)
.+..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+..++.+++++|+++|++++.+|..
T Consensus 76 ---------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 145 (169)
T 2y1l_E 76 ---------VDHAGMTPLRLAALFGHLEIVEVLLKNGADVN-ANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKF 145 (169)
T ss_dssp ---------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred ---------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 68899999999999999999999999999954 78889999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhcC
Q 037129 214 GKTALHAAAMRSY 226 (227)
Q Consensus 214 g~t~l~~a~~~~~ 226 (227)
|.|||++|+.+|+
T Consensus 146 g~t~l~~A~~~~~ 158 (169)
T 2y1l_E 146 GKTAFDISIDNGN 158 (169)
T ss_dssp SCCHHHHHHHTTC
T ss_pred CCCHHHHHHHhCC
Confidence 9999999999886
No 62
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=6.9e-31 Score=182.66 Aligned_cols=156 Identities=21% Similarity=0.298 Sum_probs=139.3
Q ss_pred CCHHHHHHHhcCCchHHHhhHh-hhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHH
Q 037129 24 MDPIFFNAAAAGNSEPFKDMAG-EEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHV 102 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v~~ll~-~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~ 102 (227)
..++|+.|+..|+.+.|++|++ .+.+++..+..|.||||+| +..++.+++++|++. +.+++.++..|+||||+
T Consensus 8 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~ 81 (165)
T 3twr_A 8 ADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFA--AGYNRVSVVEYLLQH----GADVHAKDKGGLVPLHN 81 (165)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHH
T ss_pred hhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHH--HHcChHHHHHHHHhc----CCCCCccCCCCCCHHHH
Confidence 4567999999999999999998 5666667788899999999 999999999999986 77788899999999999
Q ss_pred HHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCC
Q 037129 103 AAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGK 182 (227)
Q Consensus 103 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 182 (227)
|+..|+.+++++|+++|...+. .+..|.||||+|+..++.+++++|++.|+++ +..+..|.
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~ 142 (165)
T 3twr_A 82 ACSYGHYEVAELLVKHGAVVNV------------------ADLWKFTPLHEAAAKGKYEICKLLLQHGADP-TKKNRDGN 142 (165)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSC
T ss_pred HHHcCcHHHHHHHHhCCCCCCC------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCC
Confidence 9999999999999999988654 6889999999999999999999999999984 48899999
Q ss_pred CHHHHHHHcCcHHHHHHHHhcCC
Q 037129 183 TPLYMAAESRSSNMVLALLENRT 205 (227)
Q Consensus 183 t~l~~A~~~~~~~~v~~Ll~~g~ 205 (227)
|||++|.. ++.+++++|+++|+
T Consensus 143 t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 143 TPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CTGGGSCT-TCHHHHHHHHTC--
T ss_pred ChhHhHhc-CChHHHHHHhhccc
Confidence 99999776 89999999999885
No 63
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=1.7e-30 Score=178.53 Aligned_cols=144 Identities=20% Similarity=0.234 Sum_probs=132.3
Q ss_pred CCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHH
Q 037129 57 ENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAA 136 (227)
Q Consensus 57 g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 136 (227)
..++|+.| +..|+.+++++|++. +.+++ .+..|.||||+|+..|+.+++++|++.|...+.
T Consensus 2 ~~~~L~~A--~~~g~~~~v~~Ll~~----g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------ 62 (153)
T 1awc_B 2 LGKKLLEA--ARAGQDDEVRILMAN----GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA------------ 62 (153)
T ss_dssp HHHHHHHH--HHHTCHHHHHHHHHH----TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC------------
T ss_pred ccHHHHHH--HHcCCHHHHHHHHHc----CCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------------
Confidence 35899999 999999999999997 33444 578899999999999999999999999987654
Q ss_pred HHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCC
Q 037129 137 WQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKT 216 (227)
Q Consensus 137 ~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 216 (227)
.+..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+..++.+++++|+++|++++.++..|.|
T Consensus 63 ------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t 135 (153)
T 1awc_B 63 ------RTKVDRTPLHMAASEGHANIVEVLLKHGADVN-AKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKT 135 (153)
T ss_dssp ------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred ------CCCCCCCHHHHHHHcChHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence 68889999999999999999999999999954 78899999999999999999999999999999999999999
Q ss_pred HHHHHHHhcC
Q 037129 217 ALHAAAMRSY 226 (227)
Q Consensus 217 ~l~~a~~~~~ 226 (227)
||++|+.+|+
T Consensus 136 ~l~~A~~~~~ 145 (153)
T 1awc_B 136 AFDISIDNGN 145 (153)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 9999999886
No 64
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=3.8e-30 Score=180.09 Aligned_cols=146 Identities=27% Similarity=0.285 Sum_probs=134.0
Q ss_pred CCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHH
Q 037129 57 ENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAA 136 (227)
Q Consensus 57 g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 136 (227)
+.+|||.| +..|+.++++.+++. .+..++.++..|+||||+|+..|+.+++++|+++|...+.
T Consensus 2 ~~~~L~~A--~~~g~~~~v~~ll~~---~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------ 64 (172)
T 3v30_A 2 DSLSIHQL--AAQGELDQLKEHLRK---GDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI------------ 64 (172)
T ss_dssp --CCHHHH--HHTTCHHHHHHHHTT---CSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC------------
T ss_pred chhhHHHH--HHcCCHHHHHHHHHc---CcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchh------------
Confidence 46899999 999999999999985 3444788899999999999999999999999999988654
Q ss_pred HHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCC
Q 037129 137 WQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKT 216 (227)
Q Consensus 137 ~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 216 (227)
.+..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+..++.+++++|+++|++++.++..|.|
T Consensus 65 ------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t 137 (172)
T 3v30_A 65 ------LAKERESALSLASTGGYTDIVGLLLERDVDIN-IYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYT 137 (172)
T ss_dssp ------CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred ------hcccCCCHHHHHHHCCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCC
Confidence 68899999999999999999999999999954 78899999999999999999999999999999999999999
Q ss_pred HHHHHHHhcC
Q 037129 217 ALHAAAMRSY 226 (227)
Q Consensus 217 ~l~~a~~~~~ 226 (227)
||++|+.+|+
T Consensus 138 ~l~~A~~~~~ 147 (172)
T 3v30_A 138 PMDLAVALGY 147 (172)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHhCc
Confidence 9999999886
No 65
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=2.9e-34 Score=209.90 Aligned_cols=177 Identities=17% Similarity=0.078 Sum_probs=157.0
Q ss_pred ccCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHH
Q 037129 22 QQMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLH 101 (227)
Q Consensus 22 ~~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~ 101 (227)
....++|+.|+..|+.++|++|++.|.+++..|..|.||||+| +..|+.+++++|++. +.+++.+|..|+||||
T Consensus 19 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A--~~~g~~~~v~~Ll~~----ga~~n~~d~~g~tpLh 92 (229)
T 2vge_A 19 LNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNA--ICGANYSIVDFLITA----GANVNSPDSHGWTPLH 92 (229)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCCHHH
T ss_pred cchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH--HHcCCHHHHHHHHHC----CCCCCCCCCCCCCHHH
Confidence 3445689999999999999999999999999999999999999 999999999999986 7788999999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhcc-CCCCcHHHHH--HhcCCHHHHHHHHhcCCCCCcccc
Q 037129 102 VAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTN-KEKNTALHEA--VCHQNVDVVEILTKEDPDYPYSAN 178 (227)
Q Consensus 102 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~l~~A--~~~~~~~~~~~ll~~~~~~~~~~~ 178 (227)
+|+..|+.+++++|+++|+..+. .+ ..|.||||+| +..++.+++++|++.|+++. ..+
T Consensus 93 ~A~~~g~~~~v~~Ll~~ga~~~~------------------~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~-~~~ 153 (229)
T 2vge_A 93 CAASCNDTVICMALVQHGAAIFA------------------TTLSDGATAFEKCDPYREGYADCATYLADVEQSMG-LMN 153 (229)
T ss_dssp HHHHTTCHHHHHHHHTTTCCTTC------------------CCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTT-TSG
T ss_pred HHHHcCCHHHHHHHHHcCCCccc------------------ccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcc-ccc
Confidence 99999999999999999988764 44 6899999999 99999999999999999854 778
Q ss_pred cCCCCHHHHHHHcCcHHHHHHHHhcCCC--CcccCCCCCCHHHHHHHhcC
Q 037129 179 NYGKTPLYMAAESRSSNMVLALLENRTS--VSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 179 ~~~~t~l~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~l~~a~~~~~ 226 (227)
..+.+|++.++... ..++|++.|++ ++.+|..|.||||+|+.+|+
T Consensus 154 ~~~~~~l~~~~~~~---~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~ 200 (229)
T 2vge_A 154 SGAVYALWDYSAEF---GDELSFREGESVTVLRRDGPEETDWWWAALHGQ 200 (229)
T ss_dssp GGEEEESSCBCCSS---TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTE
T ss_pred CCchHHHHHHhhcc---ccccCccccccccccccCCCcccHHHHHHHcCC
Confidence 88889998655443 33678889988 77889999999999999886
No 66
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=6.1e-30 Score=192.11 Aligned_cols=157 Identities=14% Similarity=0.162 Sum_probs=143.4
Q ss_pred cCCHHHHHHHhcCCchHHHhhHhhhh-ccccccCCCCchhhhhhhh-----cccccccHHHHHHHHHhCCcccccccCCC
Q 037129 23 QMDPIFFNAAAAGNSEPFKDMAGEEI-KSLLTAKTENTILHINIIS-----QERENVSTKFVAEILEKCPLLLLQVNAKD 96 (227)
Q Consensus 23 ~~~~~l~~a~~~g~~~~v~~ll~~~~-~~~~~~~~g~t~L~~a~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~g 96 (227)
.+.+|||+|+..|+.++|++|++.|. +++..+..|.||||+| + ..++.++++.|++. +...+..+..|
T Consensus 110 ~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a--~~~~~~~~~~~~~v~~Ll~~----g~~~~~~~~~g 183 (276)
T 4hbd_A 110 NGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLT--ALATLKTQDDIETVLQLFRL----GNINAKASQAG 183 (276)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHG--GGCCCCSHHHHHHHHHHHHH----SCTTCCCTTTC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHH--HHHHhhhhhhHHHHHHHHHc----CCCccccCCCC
Confidence 34567999999999999999999997 8889999999999999 7 67889999999987 56667788899
Q ss_pred CCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHh-cCCCCCc
Q 037129 97 DTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTK-EDPDYPY 175 (227)
Q Consensus 97 ~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~-~~~~~~~ 175 (227)
+||||+|+..|+.+++++|+++|++++. ++..|.||||+|+..|+.+++++|++ .|+++ +
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~gad~n~------------------~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~-~ 244 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACEADVNV------------------QDDDGSTALMCACEHGHKEIAGLLLAVPSCDI-S 244 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCT-T
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCC------------------CCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC-c
Confidence 9999999999999999999999998765 78999999999999999999999999 78884 4
Q ss_pred ccccCCCCHHHHHHHcCcHHHHHHHHhcC
Q 037129 176 SANNYGKTPLYMAAESRSSNMVLALLENR 204 (227)
Q Consensus 176 ~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g 204 (227)
..+..|.||||+|+..|+.+++++|++++
T Consensus 245 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 245 LTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 88999999999999999999999999874
No 67
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=3.8e-32 Score=200.07 Aligned_cols=177 Identities=15% Similarity=0.036 Sum_probs=127.6
Q ss_pred cCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHH
Q 037129 23 QMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHV 102 (227)
Q Consensus 23 ~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~ 102 (227)
.+.+||+.|+..|+.+.++.|++.|.+++.. ..|.||||.| +..|+.+++++|++. +.+++.++..|+||||+
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~d~~g~t~L~~ 76 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDS--SLEGEFDLVQRIIYE----VDDPSLPNDEGITALHN 76 (239)
T ss_dssp ----------------------------------CHHHHHHH--HHHTCHHHHHHHTST----TSSCCCCCTTSCCHHHH
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHH--HHcCCHHHHHHHHHc----CCCCCCcCCCCCCHHHH
Confidence 4577899999999999999999999998866 4889999999 999999999999975 66888999999999999
Q ss_pred HHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCC
Q 037129 103 AAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGK 182 (227)
Q Consensus 103 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~ 182 (227)
|+..|+.+++++|+++|+..+. ++..|.||||+|+..|+.+++++|++.|+++. ..+..|.
T Consensus 77 A~~~g~~~~v~~Ll~~ga~~~~------------------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~~~ 137 (239)
T 1ycs_B 77 AVCAGHTEIVKFLVQFGVNVNA------------------ADSDGWTPLHCAASCNNVQVCKFLVESGAAVF-AMTYSDM 137 (239)
T ss_dssp HHHHTCHHHHHHHHHHTCCTTC------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCSSSC
T ss_pred HHHcCCHHHHHHHHHcCCCCCc------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-eecCCCC
Confidence 9999999999999999988665 78899999999999999999999999999966 5555555
Q ss_pred -CHHHHH--HHcCcHHHHHHHHhcCCCCccc---------CCCCCCHHHHHHHhc
Q 037129 183 -TPLYMA--AESRSSNMVLALLENRTSVSHE---------GPNGKTALHAAAMRS 225 (227)
Q Consensus 183 -t~l~~A--~~~~~~~~v~~Ll~~g~~~~~~---------~~~g~t~l~~a~~~~ 225 (227)
||||.| +..|+.+++++|+++|++++.. +..+.++++++...|
T Consensus 138 ~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G 192 (239)
T 1ycs_B 138 QTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEG 192 (239)
T ss_dssp CCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSS
T ss_pred cchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCC
Confidence 999999 7889999999999999888775 556777777666554
No 68
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1.4e-30 Score=193.47 Aligned_cols=164 Identities=20% Similarity=0.184 Sum_probs=144.9
Q ss_pred ccCCHHHHHHHhc---CCchHHHhhHhhhhccccc-----------cCCCCchhhhhhhhcccccccHHHHHHHHHhCCc
Q 037129 22 QQMDPIFFNAAAA---GNSEPFKDMAGEEIKSLLT-----------AKTENTILHINIISQERENVSTKFVAEILEKCPL 87 (227)
Q Consensus 22 ~~~~~~l~~a~~~---g~~~~v~~ll~~~~~~~~~-----------~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~ 87 (227)
..+.+|||.|+.. |+.++|++|++.|.+++.. +..|.||||+| +..|+.+++++|++. +.
T Consensus 41 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~----ga 114 (256)
T 2etb_A 41 STGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIA--IEKRSLQCVKLLVEN----GA 114 (256)
T ss_dssp TTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHH--HHTTCHHHHHHHHHT----TC
T ss_pred CCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHH--HHcCCHHHHHHHHHc----CC
Confidence 3455679999999 9999999999988876522 36799999999 999999999999986 67
Q ss_pred ccccccCC-------------CCCHHHHHHHcCCHHHHHHHHH---hhhcccccchhhhhhHHHHHHHHHhccCCCCcHH
Q 037129 88 LLLQVNAK-------------DDTPLHVAAKFGHSDIVRFLVE---RAKLTQHENEELESRVGAAWQIIRMTNKEKNTAL 151 (227)
Q Consensus 88 ~~~~~~~~-------------g~tpl~~A~~~~~~~~v~~Ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l 151 (227)
+++.++.. |+||||+|+..|+.+++++|++ +|+..+. ++..|.|||
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~------------------~d~~g~TpL 176 (256)
T 2etb_A 115 DVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEA------------------TDSLGNTVL 176 (256)
T ss_dssp CTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC------------------CCTTSCCHH
T ss_pred CCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCc------------------cCCCCCCHH
Confidence 77877775 9999999999999999999999 8888664 789999999
Q ss_pred HHHHh--cCCHH-------HHHHHHhcCCCCC------cccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcc
Q 037129 152 HEAVC--HQNVD-------VVEILTKEDPDYP------YSANNYGKTPLYMAAESRSSNMVLALLENRTSVSH 209 (227)
Q Consensus 152 ~~A~~--~~~~~-------~~~~ll~~~~~~~------~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~ 209 (227)
|+|+. .++.+ ++++|++.|+++. +..+..|.||||+|+..|+.+++++|+++|.+...
T Consensus 177 h~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~ 249 (256)
T 2etb_A 177 HALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGAA 249 (256)
T ss_dssp HHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCC
Confidence 99998 78888 9999999998852 57899999999999999999999999999876543
No 69
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=2.9e-29 Score=172.85 Aligned_cols=152 Identities=20% Similarity=0.192 Sum_probs=131.7
Q ss_pred CHHHHHHHhcCCchHHHhhHhh-hhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHH
Q 037129 25 DPIFFNAAAAGNSEPFKDMAGE-EIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVA 103 (227)
Q Consensus 25 ~~~l~~a~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A 103 (227)
.++|+.|+..|+.+.+++|++. +.+++..+..|.||||++ ..|+.+++++|++. +.+++.++..|+||||+|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~~---~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A 75 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVM---MFGSTAIALELLKQ----GASPNVQDTSGTSPVHDA 75 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHS---CTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHH
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHHH---HcCCHHHHHHHHHC----CCCCCCcCCCCCCHHHHH
Confidence 3679999999999999999986 447778888999999984 45888999998875 677888899999999999
Q ss_pred HHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCC
Q 037129 104 AKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKT 183 (227)
Q Consensus 104 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t 183 (227)
+..|+.+++++|+++|...+. ++..|.||||+|+..|+.+++++|++. ++ .+..+..|.|
T Consensus 76 ~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~-~~~~~~~g~t 135 (156)
T 1bd8_A 76 ARTGFLDTLKVLVEHGADVNV------------------PDGTGALPIHLAVQEGHTAVVSFLAAE-SD-LHRRDARGLT 135 (156)
T ss_dssp HHTTCHHHHHHHHHTTCCSCC------------------CCTTSCCHHHHHHHHTCHHHHHHHHTT-SC-TTCCCTTSCC
T ss_pred HHcCcHHHHHHHHHcCCCCCC------------------cCCCCCcHHHHHHHhChHHHHHHHHhc-cC-CCCcCCCCCC
Confidence 999999999999999887654 678899999999999999999999988 66 4478889999
Q ss_pred HHHHHHHcCcHHHHHHHHhc
Q 037129 184 PLYMAAESRSSNMVLALLEN 203 (227)
Q Consensus 184 ~l~~A~~~~~~~~v~~Ll~~ 203 (227)
||++|+..++.+++++|+++
T Consensus 136 ~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 136 PLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHHcCcHHHHHHHHhh
Confidence 99999999999999999874
No 70
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=4.5e-30 Score=177.96 Aligned_cols=145 Identities=21% Similarity=0.209 Sum_probs=134.1
Q ss_pred CCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHH
Q 037129 56 TENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGA 135 (227)
Q Consensus 56 ~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 135 (227)
...||||.| +..|+.+++++|++. +.+++.++..|+||||+|+. |+.+++++|+++|...+.
T Consensus 4 ~~~~~L~~A--~~~g~~~~v~~Ll~~----~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~----------- 65 (162)
T 1ihb_A 4 PWGNELASA--AARGDLEQLTSLLQN----NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDL----------- 65 (162)
T ss_dssp -CHHHHHHH--HHHTCHHHHHHHTTS----CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTC-----------
T ss_pred hHhhHHHHH--HHcCCHHHHHHHHhC----CCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCC-----------
Confidence 467999999 999999999999974 67788899999999999999 999999999999988654
Q ss_pred HHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCC-CcccCCCC
Q 037129 136 AWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTS-VSHEGPNG 214 (227)
Q Consensus 136 ~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g 214 (227)
++..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+..++.+++++|+++|++ ++.++..|
T Consensus 66 -------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g 137 (162)
T 1ihb_A 66 -------KDRTGFAVIHDAARAGFLDTLQTLLEFQADVN-IEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKG 137 (162)
T ss_dssp -------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTS
T ss_pred -------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCC
Confidence 68899999999999999999999999999854 7889999999999999999999999999998 69999999
Q ss_pred CCHHHHHHHhcC
Q 037129 215 KTALHAAAMRSY 226 (227)
Q Consensus 215 ~t~l~~a~~~~~ 226 (227)
.|||++|+.+|+
T Consensus 138 ~t~l~~A~~~~~ 149 (162)
T 1ihb_A 138 DTACDLARLYGR 149 (162)
T ss_dssp CCHHHHHHHTTC
T ss_pred CcHHHHHHHcCC
Confidence 999999999886
No 71
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=1.4e-29 Score=192.16 Aligned_cols=173 Identities=23% Similarity=0.214 Sum_probs=148.5
Q ss_pred HHHhcCCchHHHhhHhhhhccc---------cccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHH
Q 037129 30 NAAAAGNSEPFKDMAGEEIKSL---------LTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPL 100 (227)
Q Consensus 30 ~a~~~g~~~~v~~ll~~~~~~~---------~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl 100 (227)
.++..++.+.++.++....++. ..+..|.||||.| +..|+.+++++|++. +.+++..+..|+|||
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L 77 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAA--CSSGDTEEVLRLLER----GADINYANVDGLTAL 77 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHH--HHHTCHHHHHHHHHH----CCCTTCBCTTCCBHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHH--HHcCCHHHHHHHHHc----CCCCcccCCCCCCHH
Confidence 3677777888888887443322 1234677999999 999999999999987 677889999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcc----
Q 037129 101 HVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYS---- 176 (227)
Q Consensus 101 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~---- 176 (227)
|+|+..|+.+++++|+++|+..+. .+..|.||||+|+..|+.+++++|++.|+++...
T Consensus 78 ~~A~~~g~~~~v~~Ll~~ga~~~~------------------~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g 139 (299)
T 1s70_B 78 HQACIDDNVDMVKFLVENGANINQ------------------PDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEG 139 (299)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCC------------------CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCC
Confidence 999999999999999999988654 6788999999999999999999999998775311
Q ss_pred -------------------------------------------------------cccCCCCHHHHHHHcCcHHHHHHHH
Q 037129 177 -------------------------------------------------------ANNYGKTPLYMAAESRSSNMVLALL 201 (227)
Q Consensus 177 -------------------------------------------------------~~~~~~t~l~~A~~~~~~~~v~~Ll 201 (227)
.+..|.||||+|+..|+.+++++|+
T Consensus 140 ~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 219 (299)
T 1s70_B 140 DTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLI 219 (299)
T ss_dssp CCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred CCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHH
Confidence 2245889999999999999999999
Q ss_pred hcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 202 ENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 202 ~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
++|++++.+|..|.||||+|+.+|+
T Consensus 220 ~~g~d~~~~d~~g~tpL~~A~~~~~ 244 (299)
T 1s70_B 220 QARYDVNIKDYDGWTPLHAAAHWGK 244 (299)
T ss_dssp TTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HcCCCCCCcCCCCCcHHHHHHhcCC
Confidence 9999999999999999999999886
No 72
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=8e-30 Score=179.63 Aligned_cols=148 Identities=23% Similarity=0.231 Sum_probs=133.8
Q ss_pred CCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHH
Q 037129 55 KTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVG 134 (227)
Q Consensus 55 ~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 134 (227)
..+.++|+.| +..|+.++++.|++. .+.+++..+..|+||||+|+..|+.+++++|++.|...+.
T Consensus 3 ~~~~~~l~~A--~~~g~~~~v~~ll~~---~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---------- 67 (179)
T 3f6q_A 3 PEFMDDIFTQ--CREGNAVAVRLWLDN---TENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV---------- 67 (179)
T ss_dssp ----CCHHHH--HHHTCHHHHHHHHHC---TTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC----------
T ss_pred HHHHHHHHHH--HHcCCHHHHHHHHhc---CcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC----------
Confidence 3678999999 999999999999984 3566888999999999999999999999999999988664
Q ss_pred HHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCC
Q 037129 135 AAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNG 214 (227)
Q Consensus 135 ~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 214 (227)
.+..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+..++.+++++|+++|++++.++..|
T Consensus 68 --------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 138 (179)
T 3f6q_A 68 --------MNRGDDTPLHLAASHGHRDIVQKLLQYKADIN-AVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYG 138 (179)
T ss_dssp --------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTS
T ss_pred --------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCC
Confidence 68899999999999999999999999999954 788999999999999999999999999999999999999
Q ss_pred CCHHHHHHHhcC
Q 037129 215 KTALHAAAMRSY 226 (227)
Q Consensus 215 ~t~l~~a~~~~~ 226 (227)
.|||++|+..++
T Consensus 139 ~tpl~~A~~~~~ 150 (179)
T 3f6q_A 139 EMPVDKAKAPLR 150 (179)
T ss_dssp CCGGGGSCHHHH
T ss_pred CCcHHHHHHHHH
Confidence 999999987653
No 73
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=3.7e-30 Score=178.99 Aligned_cols=147 Identities=20% Similarity=0.267 Sum_probs=133.6
Q ss_pred ccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhh
Q 037129 53 TAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESR 132 (227)
Q Consensus 53 ~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 132 (227)
.+..|.++||.| +..|+.++++.|++. .+..++..+..|+||||+|+..|+.+++++|+++|...+.
T Consensus 4 ~~~~~~~~l~~A--~~~g~~~~v~~ll~~---~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------- 70 (165)
T 3twr_A 4 GNSEADRQLLEA--AKAGDVETVKKLCTV---QSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA-------- 70 (165)
T ss_dssp --CHHHHHHHHH--HHHTCHHHHHHHCCT---TTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC--------
T ss_pred CcchhhHHHHHH--HHhCCHHHHHHHHHc---CCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCc--------
Confidence 456788999999 999999999999874 3556677888899999999999999999999999988654
Q ss_pred HHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCC
Q 037129 133 VGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGP 212 (227)
Q Consensus 133 ~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 212 (227)
.+..|.||||+|+..++.+++++|++.|+++. ..+..|.||||+|+..++.+++++|+++|++++.+|.
T Consensus 71 ----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 139 (165)
T 3twr_A 71 ----------KDKGGLVPLHNACSYGHYEVAELLVKHGAVVN-VADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR 139 (165)
T ss_dssp ----------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred ----------cCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 78899999999999999999999999999954 7889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHH
Q 037129 213 NGKTALHAAAM 223 (227)
Q Consensus 213 ~g~t~l~~a~~ 223 (227)
.|.|||++|+.
T Consensus 140 ~g~t~l~~a~~ 150 (165)
T 3twr_A 140 DGNTPLDLVKD 150 (165)
T ss_dssp TSCCTGGGSCT
T ss_pred CCCChhHhHhc
Confidence 99999999765
No 74
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=1.7e-29 Score=173.98 Aligned_cols=144 Identities=17% Similarity=0.202 Sum_probs=133.4
Q ss_pred CCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHH
Q 037129 57 ENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAA 136 (227)
Q Consensus 57 g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 136 (227)
+.|+||.| +..|+.++++.|++. .+.+++..+..|+||||+ +..|+.+++++|+++|...+.
T Consensus 2 ~~~~L~~A--~~~g~~~~v~~ll~~---~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~------------ 63 (156)
T 1bd8_A 2 AGDRLSGA--AARGDVQEVRRLLHR---ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNV------------ 63 (156)
T ss_dssp HHHHHHHH--HHHTCHHHHHHHHHT---TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTC------------
T ss_pred cchHHHHH--HHhCCHHHHHHHHHh---hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCC------------
Confidence 46899999 999999999999985 355788899999999999 999999999999999988654
Q ss_pred HHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCC
Q 037129 137 WQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKT 216 (227)
Q Consensus 137 ~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 216 (227)
++..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..++.+++++|+++ ++++.+|..|.|
T Consensus 64 ------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t 135 (156)
T 1bd8_A 64 ------QDTSGTSPVHDAARTGFLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLT 135 (156)
T ss_dssp ------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCC
T ss_pred ------cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCC
Confidence 7889999999999999999999999999984 47888999999999999999999999999 999999999999
Q ss_pred HHHHHHHhcC
Q 037129 217 ALHAAAMRSY 226 (227)
Q Consensus 217 ~l~~a~~~~~ 226 (227)
||++|+.+|+
T Consensus 136 ~l~~A~~~~~ 145 (156)
T 1bd8_A 136 PLELALQRGA 145 (156)
T ss_dssp HHHHHHHSCC
T ss_pred HHHHHHHcCc
Confidence 9999999886
No 75
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=6.1e-30 Score=190.48 Aligned_cols=164 Identities=20% Similarity=0.184 Sum_probs=143.0
Q ss_pred ccCCHHHHHHH---hcCCchHHHhhHhhhhc-----------cccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCc
Q 037129 22 QQMDPIFFNAA---AAGNSEPFKDMAGEEIK-----------SLLTAKTENTILHINIISQERENVSTKFVAEILEKCPL 87 (227)
Q Consensus 22 ~~~~~~l~~a~---~~g~~~~v~~ll~~~~~-----------~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~ 87 (227)
..+.+|||.|+ ..|+.++|++|++.|.+ ....+..|.||||+| +..|+.+++++|++. +.
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~----ga 117 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIA--IERRCKHYVELLVEK----GA 117 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHH--HHTTCHHHHHHHHHT----TC
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHH--HHcCCHHHHHHHHhC----CC
Confidence 34667899999 77999999999997744 224455899999999 999999999999996 67
Q ss_pred cccccc--------------CCCCCHHHHHHHcCCHHHHHHHHH---hhhcccccchhhhhhHHHHHHHHHhccCCCCcH
Q 037129 88 LLLQVN--------------AKDDTPLHVAAKFGHSDIVRFLVE---RAKLTQHENEELESRVGAAWQIIRMTNKEKNTA 150 (227)
Q Consensus 88 ~~~~~~--------------~~g~tpl~~A~~~~~~~~v~~Ll~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 150 (227)
+++..+ ..|+||||+|+..|+.+++++|++ .|...+. ++..|+||
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~------------------~d~~g~Tp 179 (260)
T 3jxi_A 118 DVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRR------------------QDSRGNTV 179 (260)
T ss_dssp CTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC------------------CCTTSCCH
T ss_pred CcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcc------------------cCCCCCcH
Confidence 778777 589999999999999999999999 8887654 78999999
Q ss_pred HHHHHhcCC---------HHHHHHHHhcCCCCC------cccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcc
Q 037129 151 LHEAVCHQN---------VDVVEILTKEDPDYP------YSANNYGKTPLYMAAESRSSNMVLALLENRTSVSH 209 (227)
Q Consensus 151 l~~A~~~~~---------~~~~~~ll~~~~~~~------~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~ 209 (227)
||+|+..++ .+++++|++.|+++. +..+..|.||||+|+..|+.+++++|+++|.+...
T Consensus 180 Lh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 180 LHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAA 253 (260)
T ss_dssp HHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCccc
Confidence 999998877 799999999988753 46899999999999999999999999999876544
No 76
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=5.8e-29 Score=167.50 Aligned_cols=133 Identities=12% Similarity=0.163 Sum_probs=110.9
Q ss_pred hccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccch
Q 037129 48 IKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENE 127 (227)
Q Consensus 48 ~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~ 127 (227)
.+++..+..|.||||+| +..++.+++++|++. +.+++.++..|+||||+|+. ++.+++++|+++|...+.
T Consensus 3 ~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~--- 72 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATA--AARGQVETVRQLLEA----GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC--- 72 (136)
T ss_dssp CCCSCCCCCCSCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC---
T ss_pred CCccCCCCCCccHHHHH--HHcCCHHHHHHHHHc----CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC---
Confidence 45567777888888888 888888888888875 66777888888888888888 888888888888887654
Q ss_pred hhhhhHHHHHHHHHhccCC-CCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCC
Q 037129 128 ELESRVGAAWQIIRMTNKE-KNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTS 206 (227)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~-~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~ 206 (227)
++.. |.||||+|+..++.+++++|++.|+++ +..+..|.||||+|+..++.+++++|+++|+|
T Consensus 73 ---------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 73 ---------------ADPATLTRPVHDAAREGFLDTLVVLHRAGARL-DVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp ---------------CBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCC-CCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred ---------------cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 5677 888999888888888888888888884 47788888999999988899999999888875
No 77
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=6.5e-30 Score=186.81 Aligned_cols=158 Identities=15% Similarity=0.025 Sum_probs=133.9
Q ss_pred HHhhHhhhhcccc---ccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHH
Q 037129 40 FKDMAGEEIKSLL---TAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLV 116 (227)
Q Consensus 40 v~~ll~~~~~~~~---~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll 116 (227)
|+.|+++|.+++. .+..|.||||+| +..|+.+++++|++. +.+++.++..|+||||+|+..|+.+++++|+
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll 74 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDA--ALTGELEVVQQAVKE----MNDPSQPNEEGITALHNAICGANYSIVDFLI 74 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHH--HHHTCHHHHHHHHHH----SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CeehhccCCCCccccccccchhHHHHHH--HHcCCHHHHHHHHhc----CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4678888888774 344567889999 999999999999986 6778899999999999999999999999999
Q ss_pred HhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHH--HHcCcH
Q 037129 117 ERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMA--AESRSS 194 (227)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A--~~~~~~ 194 (227)
+.|+..+. .+..|.||||+|+..|+.+++++|++.|+++....+..|.||||+| +..++.
T Consensus 75 ~~ga~~n~------------------~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~ 136 (229)
T 2vge_A 75 TAGANVNS------------------PDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYA 136 (229)
T ss_dssp HTTCCTTC------------------CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHH
T ss_pred HCCCCCCC------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChH
Confidence 99988665 7889999999999999999999999999997644457999999999 999999
Q ss_pred HHHHHHHhcCCCCcccCCCCCCHHHHH
Q 037129 195 NMVLALLENRTSVSHEGPNGKTALHAA 221 (227)
Q Consensus 195 ~~v~~Ll~~g~~~~~~~~~g~t~l~~a 221 (227)
+++++|+++|++++.++..|.||++.+
T Consensus 137 ~~v~~Ll~~ga~~~~~~~~~~~~l~~~ 163 (229)
T 2vge_A 137 DCATYLADVEQSMGLMNSGAVYALWDY 163 (229)
T ss_dssp HHHHHHHHHHHHTTTSGGGEEEESSCB
T ss_pred HHHHHHHHcCCCcccccCCchHHHHHH
Confidence 999999999999999998888887743
No 78
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=3.5e-29 Score=172.50 Aligned_cols=144 Identities=13% Similarity=0.150 Sum_probs=91.6
Q ss_pred cccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhh
Q 037129 52 LTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELES 131 (227)
Q Consensus 52 ~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 131 (227)
..+..|.||||+| +..|+.+++++|++. +.+++..+..|+||||+|+ .|+.+++++|+++|...+.
T Consensus 7 ~~~~~~~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~------- 72 (156)
T 1bi7_B 7 SSMEPSADWLATA--AARGRVEEVRALLEA----GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC------- 72 (156)
T ss_dssp ---CCSTTHHHHH--HHHTCHHHHHHHHTT----TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC-------
T ss_pred CCCccchHHHHHH--HHcCCHHHHHHHHHc----CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC-------
Confidence 3445667777777 777777777777764 5566667777777777764 6777777777777766544
Q ss_pred hHHHHHHHHHhccCCCCc-HHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCccc
Q 037129 132 RVGAAWQIIRMTNKEKNT-ALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHE 210 (227)
Q Consensus 132 ~~~~~~~~~~~~~~~~~t-~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~ 210 (227)
++..|.| |||+|+..|+.+++++|++.|+++. ..+..|.||||+|+..++.+++++|+++|++++.+
T Consensus 73 -----------~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~ 140 (156)
T 1bi7_B 73 -----------ADPATLTRPVHDAAREGFLDTLVVLHRAGARLD-VRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGS 140 (156)
T ss_dssp -----------CCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSS-CCCTTCCCHHHHHHHHTCHHHHHHHSSCC------
T ss_pred -----------cCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCcc
Confidence 5667777 7777777777777777777777743 66777888888888888888888888888888888
Q ss_pred CCCCCCHHHHH
Q 037129 211 GPNGKTALHAA 221 (227)
Q Consensus 211 ~~~g~t~l~~a 221 (227)
+..|.||.+.+
T Consensus 141 ~~~g~t~~~~~ 151 (156)
T 1bi7_B 141 NHARIDAAEGP 151 (156)
T ss_dssp -----------
T ss_pred CcCcCcccccC
Confidence 88888777643
No 79
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=5.5e-29 Score=191.27 Aligned_cols=167 Identities=15% Similarity=0.088 Sum_probs=137.1
Q ss_pred HHHHHhcCCchHHHhhHhhhhcccc-ccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHc
Q 037129 28 FFNAAAAGNSEPFKDMAGEEIKSLL-TAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKF 106 (227)
Q Consensus 28 l~~a~~~g~~~~v~~ll~~~~~~~~-~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~ 106 (227)
++.|+..+..++++.|++.|++++. .+..|.||||+| +..|+.+++++|++. +.+++.++..|+||||+|+..
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~A--a~~g~~~~v~~Ll~~----Gad~n~~d~~g~TpLh~A~~~ 174 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWL--TSIANLELVKHLVKH----GSNRLYGDNMGESCLVKAVKS 174 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTBCCTTCCCHHHHHHHS
T ss_pred hHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHH--HHcCCHHHHHHHHHc----CCCCCCcCCCCCCHHHHHHHh
Confidence 4667777778889999999999998 899999999999 999999999999986 788999999999999999999
Q ss_pred CC---HHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHh----cCCHHHHHHHHhc----------
Q 037129 107 GH---SDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVC----HQNVDVVEILTKE---------- 169 (227)
Q Consensus 107 ~~---~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~----~~~~~~~~~ll~~---------- 169 (227)
|+ .++++.|++.+... ++.++..|+||||+|+. .|+.+++++|++.
T Consensus 175 g~~~~~~~~~~ll~~~~~~-----------------~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~ 237 (327)
T 1sw6_A 175 VNNYDSGTFEALLDYLYPC-----------------LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQN 237 (327)
T ss_dssp SHHHHTTCHHHHHHHHGGG-----------------GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGG
T ss_pred cccccHHHHHHHHHhhhcc-----------------ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccc
Confidence 99 78899999987432 22478999999999999 8999999999987
Q ss_pred ----------CCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 170 ----------DPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 170 ----------~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
|.+ .+..+..|.||||.|+. +++|+++ +++.+|..|.||||+|+.+|+
T Consensus 238 ~~i~~~~~~~g~~-~~~~~~~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~ 295 (327)
T 1sw6_A 238 RPIQSGTNEKESK-PNDKNGERKDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGN 295 (327)
T ss_dssp CCEEEC-----------------CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCC
T ss_pred hHHHhhhhcccCC-cccccccCCChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCC
Confidence 666 44788899999999985 8999998 688999999999999999886
No 80
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=1.6e-29 Score=178.85 Aligned_cols=159 Identities=9% Similarity=0.074 Sum_probs=137.1
Q ss_pred HHHHHHHhcCCchHHHhhHhhhhcccccc-CCCCchhhhhhhhcccccc----cHHHHHHHHHhCCcccccccCCCCCHH
Q 037129 26 PIFFNAAAAGNSEPFKDMAGEEIKSLLTA-KTENTILHINIISQERENV----STKFVAEILEKCPLLLLQVNAKDDTPL 100 (227)
Q Consensus 26 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~~-~~g~t~L~~a~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~g~tpl 100 (227)
++|+.|+..|+++.++.++..+++ ..+ ..|.||||+| +..++.+ ++++|++. +.+++.++..|+|||
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~~--~~~~~~g~T~Lh~A--~~~~~~~~~~~iv~~Ll~~----Gadvn~~d~~g~TpL 79 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGYE--DKESVLKSNILYDV--LRNNNDEARYKISMFLINK----GADIKSRTKEGTTLF 79 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSSS--CHHHHHTTTHHHHH--TTCSCHHHHHHHHHHHHHT----TCCSSCCCTTCCCTH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCcc--cccccCCCCHHHHH--HHcCCcchHHHHHHHHHHC----CCCCCCCCCCCCcHH
Confidence 359999999999999999987765 444 6899999999 9988754 77777775 889999999999999
Q ss_pred HHHHHcCC------HHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCC-cHHHHHHhcC-----CHHHHHHHHh
Q 037129 101 HVAAKFGH------SDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKN-TALHEAVCHQ-----NVDVVEILTK 168 (227)
Q Consensus 101 ~~A~~~~~------~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-t~l~~A~~~~-----~~~~~~~ll~ 168 (227)
|+|+..++ .+++++|+++|++++. ++..|. ||||+|+..+ ..+++++|++
T Consensus 80 h~a~~~~~~~~~~~~~iv~~Ll~~Gadin~------------------~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~ 141 (186)
T 3t8k_A 80 FPLFQGGGNDITGTTELCKIFLEKGADITA------------------LYKPYKIVVFKNIFNYFVDENEMIPLYKLIFS 141 (186)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCCSSS------------------CBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHT
T ss_pred HHHHHcCCcchhhHHHHHHHHHHCCCCCCc------------------cCCCcCchHHHHHHHcCCChhhHHHHHHHHHH
Confidence 99999987 5789999999999776 788999 9999999854 3569999999
Q ss_pred -cCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccC
Q 037129 169 -EDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEG 211 (227)
Q Consensus 169 -~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~ 211 (227)
.|+++ +.++..|.||||+|+..++.+++++|.+...+.+.++
T Consensus 142 ~~gad~-~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 142 QSGLQL-LIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp STTCCT-TCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred hcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 99995 4899999999999999999999999998765555544
No 81
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=3.5e-28 Score=178.87 Aligned_cols=146 Identities=21% Similarity=0.164 Sum_probs=104.3
Q ss_pred CCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHH
Q 037129 55 KTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVG 134 (227)
Q Consensus 55 ~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 134 (227)
..|.||||.| +..++.+.++.+++. +.+++. +..|.||||.|+..|+.+++++|++.|...+.
T Consensus 3 ~~g~t~L~~a--~~~~~~~~~~~ll~~----g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---------- 65 (239)
T 1ycs_B 3 ITGQVSLPPG--KRTNLRKTGSERIAH----GMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSL---------- 65 (239)
T ss_dssp -----------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCC----------
T ss_pred ccccccCchh--hhhhhHHHHHHHhcc----CCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCC----------
Confidence 4689999999 999999999999997 444444 46789999999999999999999999987655
Q ss_pred HHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCC
Q 037129 135 AAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNG 214 (227)
Q Consensus 135 ~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 214 (227)
++..|.||||+|+..|+.+++++|++.|+++. ..+..|.||||+|+..++.+++++|+++|++++..+..|
T Consensus 66 --------~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~ 136 (239)
T 1ycs_B 66 --------PNDEGITALHNAVCAGHTEIVKFLVQFGVNVN-AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSD 136 (239)
T ss_dssp --------CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSS
T ss_pred --------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCC
Confidence 78899999999999999999999999999954 888999999999999999999999999999999999888
Q ss_pred C-CHHHHH--HHhcC
Q 037129 215 K-TALHAA--AMRSY 226 (227)
Q Consensus 215 ~-t~l~~a--~~~~~ 226 (227)
. ||||+| +.+|+
T Consensus 137 ~~t~l~~a~~~~~g~ 151 (239)
T 1ycs_B 137 MQTAADKCEEMEEGY 151 (239)
T ss_dssp CCCHHHHCCSSSTTC
T ss_pred CcchHHHHHHhhhcc
Confidence 7 999998 65655
No 82
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=1.3e-27 Score=164.64 Aligned_cols=142 Identities=13% Similarity=0.005 Sum_probs=115.6
Q ss_pred hccCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCC-H
Q 037129 21 KQQMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDT-P 99 (227)
Q Consensus 21 ~~~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t-p 99 (227)
.....++||.|+..|+.++|++|++.|.+++..+..|.||||+| + .++.+++++|++. +.+++.++..|+| |
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~-~~~~~~v~~Ll~~----g~~~~~~d~~g~ttp 81 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVM--M-MGSARVAELLLLH----GAEPNCADPATLTRP 81 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSS--C-TTCHHHHHHHHTT----TCCCCCCCTTTCCCH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH--H-cCCHHHHHHHHHc----CCCCCCcCCCCCcHH
Confidence 34456679999999999999999999999999999999999999 7 8999999999985 7788999999999 9
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCccccc
Q 037129 100 LHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANN 179 (227)
Q Consensus 100 l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~ 179 (227)
||+|+..|+.+++++|+++|+..+. ++..|.||||+|+..++.+++++|+++|+++. ..+.
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~------------------~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~-~~~~ 142 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVLHRAGARLDV------------------RDAWGRLPVDLAEELGHRDVARYLRAAAGGTR-GSNH 142 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCSSC------------------CCTTCCCHHHHHHHHTCHHHHHHHSSCC---------
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCcc------------------cCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCC-ccCc
Confidence 9999999999999999999988765 78899999999999999999999999999954 7888
Q ss_pred CCCCHHHHH
Q 037129 180 YGKTPLYMA 188 (227)
Q Consensus 180 ~~~t~l~~A 188 (227)
.|.||.+.+
T Consensus 143 ~g~t~~~~~ 151 (156)
T 1bi7_B 143 ARIDAAEGP 151 (156)
T ss_dssp ---------
T ss_pred CcCcccccC
Confidence 898887744
No 83
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=1.6e-26 Score=153.28 Aligned_cols=126 Identities=28% Similarity=0.388 Sum_probs=110.0
Q ss_pred CCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHH
Q 037129 56 TENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGA 135 (227)
Q Consensus 56 ~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 135 (227)
+|.||||+| +..|+.+++++|++. +.+++..+..|.||||+|+..++.+++++|++.|...+.
T Consensus 1 ~g~t~L~~A--~~~~~~~~v~~Ll~~----~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~----------- 63 (126)
T 1n0r_A 1 NGRTPLHLA--ARNGHLEVVKLLLEA----GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA----------- 63 (126)
T ss_dssp CCCCHHHHH--HHHTCHHHHHHHHHH----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-----------
T ss_pred CCccHHHHH--HHcCcHHHHHHHHHc----CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcc-----------
Confidence 478999999 999999999999886 666778888899999999999999999999998877654
Q ss_pred HHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCC
Q 037129 136 AWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTS 206 (227)
Q Consensus 136 ~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~ 206 (227)
++..|.||||+|+..++.+++++|++.|+++. ..+..|.|||++|+..++.+++++|+++|++
T Consensus 64 -------~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 64 -------KDKNGRTPLHLAARNGHLEVVKLLLEAGADVN-AKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp -------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred -------cCCCCCcHHHHHHHcChHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 67888999999999999999999999988844 7788899999999999999999999999875
No 84
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=4.8e-27 Score=158.10 Aligned_cols=125 Identities=14% Similarity=0.060 Sum_probs=116.1
Q ss_pred cCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCC-CCCHHH
Q 037129 23 QMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAK-DDTPLH 101 (227)
Q Consensus 23 ~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-g~tpl~ 101 (227)
...++||.|+..|+.+++++|++.|.+++..+..|.||||+| +. ++.+++++|++. +.+++.++.. |+||||
T Consensus 11 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~-~~~~~v~~Ll~~----g~~~~~~~~~~g~t~L~ 83 (136)
T 1d9s_A 11 SSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVM--MM-GSAQVAELLLLH----GAEPNCADPATLTRPVH 83 (136)
T ss_dssp CCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTS--TT-SCHHHHHHHHHH----TCCSSCCBTTTTBCHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHH--Hc-CCHHHHHHHHHC----CCCCCCcCCCCCCCHHH
Confidence 345579999999999999999999999999999999999999 88 999999999997 7778899999 999999
Q ss_pred HHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCC
Q 037129 102 VAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPD 172 (227)
Q Consensus 102 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~ 172 (227)
+|+..|+.+++++|+++|+..+. ++..|.||||+|+..++.+++++|+++|++
T Consensus 84 ~A~~~~~~~~v~~Ll~~ga~~~~------------------~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 84 DAAREGFLDTLVVLHRAGARLDV------------------CDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHTCHHHHHHHHHTCCCCCC------------------CSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCc------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999988765 788999999999999999999999998864
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=1.5e-27 Score=168.65 Aligned_cols=143 Identities=11% Similarity=0.002 Sum_probs=125.3
Q ss_pred CCchhhhhhhhcccccccHHHHHHHHHhCCccccccc-CCCCCHHHHHHHcCCH----HHHHHHHHhhhcccccchhhhh
Q 037129 57 ENTILHINIISQERENVSTKFVAEILEKCPLLLLQVN-AKDDTPLHVAAKFGHS----DIVRFLVERAKLTQHENEELES 131 (227)
Q Consensus 57 g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~g~tpl~~A~~~~~~----~~v~~Ll~~~~~~~~~~~~~~~ 131 (227)
+.++|+.| ++.|+.+.++.+++. + ++..+ ..|+||||+|+..++. +++++|+++|++++.
T Consensus 6 ~~~~l~~A--a~~g~~~~~~~l~~~----~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~------- 70 (186)
T 3t8k_A 6 EYRTVSAA--AMLGTYEDFLELFEK----G--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKS------- 70 (186)
T ss_dssp HCSSHHHH--HHHSCHHHHHHHHHH----S--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC-------
T ss_pred cccHHHHH--HHcCCHHHHHHHHhc----C--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC-------
Confidence 56899999 999999998887764 2 33445 7799999999999975 599999999999876
Q ss_pred hHHHHHHHHHhccCCCCcHHHHHHhcCC------HHHHHHHHhcCCCCCcccccCCC-CHHHHHHHcC-----cHHHHHH
Q 037129 132 RVGAAWQIIRMTNKEKNTALHEAVCHQN------VDVVEILTKEDPDYPYSANNYGK-TPLYMAAESR-----SSNMVLA 199 (227)
Q Consensus 132 ~~~~~~~~~~~~~~~~~t~l~~A~~~~~------~~~~~~ll~~~~~~~~~~~~~~~-t~l~~A~~~~-----~~~~v~~ 199 (227)
++..|+||||+|+..++ .+++++|++.|++++ .++..|. ||||+|+..+ ..+++++
T Consensus 71 -----------~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin-~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~ 138 (186)
T 3t8k_A 71 -----------RTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADIT-ALYKPYKIVVFKNIFNYFVDENEMIPLYKL 138 (186)
T ss_dssp -----------CCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSS-SCBGGGTBCTTGGGGGCCSCHHHHHHHHHH
T ss_pred -----------CCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCC-ccCCCcCchHHHHHHHcCCChhhHHHHHHH
Confidence 78999999999999886 588999999999955 8899999 9999999844 4579999
Q ss_pred HHh-cCCCCcccCCCCCCHHHHHHHhcC
Q 037129 200 LLE-NRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 200 Ll~-~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
|++ +|++++.+|..|.||||+|+..|+
T Consensus 139 Ll~~~gad~~~~d~~G~TpL~~A~~~~~ 166 (186)
T 3t8k_A 139 IFSQSGLQLLIKDKWGLTALEFVKRCQK 166 (186)
T ss_dssp HHTSTTCCTTCCCTTSCCHHHHHHTTTC
T ss_pred HHHhcCCCCcccCCCCCCHHHHHHHcCC
Confidence 999 999999999999999999999876
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=1.8e-26 Score=155.30 Aligned_cols=124 Identities=18% Similarity=0.218 Sum_probs=69.0
Q ss_pred CCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHH
Q 037129 56 TENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGA 135 (227)
Q Consensus 56 ~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 135 (227)
.+.||||+| +..|+.+++++|++. +.+++..+..|+||||+|+..|+.+++++|+++|...+.
T Consensus 13 ~~~t~l~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----------- 75 (136)
T 2jab_A 13 DLGKKLLEA--ARAGQDDEVRILMAN----GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA----------- 75 (136)
T ss_dssp HHHHHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-----------
T ss_pred cccHHHHHH--HHhCCHHHHHHHHHc----CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-----------
Confidence 344555555 555555555555553 444455555555555555555555555555555554332
Q ss_pred HHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcC
Q 037129 136 AWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENR 204 (227)
Q Consensus 136 ~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g 204 (227)
.+..|.||||+|+..++.+++++|++.|+++ +..+..|.||||+|+..++.+++++|+++|
T Consensus 76 -------~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 76 -------VDAIGFTPLHLAAFIGHLEIAEVLLKHGADV-NAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp -------CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred -------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-cCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 4455556666666666666666666555553 245555666666666666666666665544
No 87
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=1.3e-26 Score=155.94 Aligned_cols=127 Identities=21% Similarity=0.212 Sum_probs=115.7
Q ss_pred hhccCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCH
Q 037129 20 IKQQMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTP 99 (227)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tp 99 (227)
......++||+|+..|+.++|++|++.|.+++..|..|.||||+| +..++.+++++|++. +.+++.++..|+||
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~~~~d~~g~t~ 83 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLA--TAHGHLEIVEVLLKN----GADVNAVDAIGFTP 83 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTCCCH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCcCCCCCCCH
Confidence 344457789999999999999999999999999999999999999 999999999999986 77888999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcC
Q 037129 100 LHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKED 170 (227)
Q Consensus 100 l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~ 170 (227)
||+|+..|+.+++++|+++|...+. .+..|.|||++|+..++.+++++|++.|
T Consensus 84 L~~A~~~~~~~~v~~Ll~~g~~~~~------------------~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 84 LHLAAFIGHLEIAEVLLKHGADVNA------------------QDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcC------------------cCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999988654 7889999999999999999999999865
No 88
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=2.6e-26 Score=154.67 Aligned_cols=126 Identities=23% Similarity=0.332 Sum_probs=61.4
Q ss_pred cccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhh
Q 037129 52 LTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELES 131 (227)
Q Consensus 52 ~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 131 (227)
.++..|.||||+| +..|+.+++++|++. +.+++.++..|+||||+|+..|+.+++++|+++|...+.
T Consensus 5 ~~~~~g~t~L~~A--~~~~~~~~~~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------- 71 (137)
T 3c5r_A 5 FTNHRGETLLHIA--SIKGDIPSVEYLLQN----GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT------- 71 (137)
T ss_dssp CCCTTCCCHHHHH--HHHTCHHHHHHHHHT----TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------
T ss_pred CcCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC-------
Confidence 3444555555555 555555555555543 344444455555555555555555555555555444322
Q ss_pred hHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHh
Q 037129 132 RVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLE 202 (227)
Q Consensus 132 ~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~ 202 (227)
++..|.||||+|+..++.+++++|++.|+++ +..+..|.|||++|+..+..+++++|.+
T Consensus 72 -----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 72 -----------TGYQNDSPLHDAAKNGHVDIVKLLLSYGASR-NAVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp -----------CCGGGCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred -----------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 3444455555555555555555555555442 2444455555555554444444444443
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=1.2e-25 Score=149.05 Aligned_cols=125 Identities=24% Similarity=0.271 Sum_probs=116.2
Q ss_pred CCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHH
Q 037129 24 MDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVA 103 (227)
Q Consensus 24 ~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A 103 (227)
+.++|+.|+..|+.+++++|++.|.+++..+..|.||||+| +..++.+++++|++. +.+++.++..|.||||+|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A--~~~~~~~~~~~Ll~~----g~~~~~~~~~g~t~l~~A 75 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLA--ARNGHLEVVKLLLEA----GADVNAKDKNGRTPLHLA 75 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHH--HHcCcHHHHHHHHHc----CCCCcccCCCCCcHHHHH
Confidence 45689999999999999999999999999999999999999 999999999999985 677888999999999999
Q ss_pred HHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCC
Q 037129 104 AKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPD 172 (227)
Q Consensus 104 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~ 172 (227)
+..++.+++++|+++|...+. ++..|.|||++|+..++.+++++|+++|++
T Consensus 76 ~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 76 ARNGHLEVVKLLLEAGADVNA------------------KDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHcChHHHHHHHHHcCCCCcc------------------cCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999988654 688999999999999999999999999875
No 90
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=1.1e-26 Score=156.41 Aligned_cols=116 Identities=24% Similarity=0.261 Sum_probs=105.0
Q ss_pred cccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcC
Q 037129 91 QVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKED 170 (227)
Q Consensus 91 ~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~ 170 (227)
.++..|+||||+|+..|+.+++++|++.|...+. .+..|.||||+|+..++.+++++|++.|
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 66 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNV------------------KDHAGWTPLHEACNHGHLKVVELLLQHK 66 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------------------CCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 4688899999999999999999999999887654 6788999999999999999999999999
Q ss_pred CCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhc
Q 037129 171 PDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRS 225 (227)
Q Consensus 171 ~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 225 (227)
+++. ..+..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+..+
T Consensus 67 ~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 120 (137)
T 3c5r_A 67 ALVN-TTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDES 120 (137)
T ss_dssp CCTT-CCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHH
T ss_pred Cccc-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhcc
Confidence 8854 78889999999999999999999999999999999999999999987655
No 91
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=3.2e-25 Score=146.56 Aligned_cols=114 Identities=24% Similarity=0.255 Sum_probs=103.4
Q ss_pred cCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCC
Q 037129 93 NAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPD 172 (227)
Q Consensus 93 ~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~ 172 (227)
+..|.||||+|+..|+.+++++|++.|...+. .+..|.||||+|+..++.+++++|++.|++
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 65 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNR------------------TLEGGRKPLHYAADCGQLEILEFLLLKGAD 65 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTS------------------CCTTSSCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCc------------------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 55788999999999999999999999987654 688999999999999999999999999999
Q ss_pred CCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhc
Q 037129 173 YPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRS 225 (227)
Q Consensus 173 ~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 225 (227)
+. ..+..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|...+
T Consensus 66 ~~-~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 66 IN-APDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp TT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHH
T ss_pred CC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHH
Confidence 54 78899999999999999999999999999999999999999999986543
No 92
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=1.4e-25 Score=170.13 Aligned_cols=139 Identities=21% Similarity=0.166 Sum_probs=118.3
Q ss_pred CCchhhhhhhhcccccccHHHHHHHHHhCCccccc------ccCCCCCHHHHHHHc---CCHHHHHHHHHhhhcccccch
Q 037129 57 ENTILHINIISQERENVSTKFVAEILEKCPLLLLQ------VNAKDDTPLHVAAKF---GHSDIVRFLVERAKLTQHENE 127 (227)
Q Consensus 57 g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~------~~~~g~tpl~~A~~~---~~~~~v~~Ll~~~~~~~~~~~ 127 (227)
..++|+.| +..++.+.++.+++. +.+++. .+..|+||||+|+.. ++.+++++|+++|+.++.
T Consensus 151 ~~~~L~~A--~~~g~~~~v~~ll~~----g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~--- 221 (301)
T 2b0o_E 151 EPQRLWTA--ICNRDLLSVLEAFAN----GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA--- 221 (301)
T ss_dssp CHHHHHHH--HHTTCHHHHHHHHHT----TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTC---
T ss_pred hHHHHhhh--hhccCHHHHHHHHhc----CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCC---
Confidence 34679999 999999999988865 556665 588899999999997 899999999999988664
Q ss_pred hhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCC
Q 037129 128 ELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSV 207 (227)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~ 207 (227)
++..|.||||+|+..|+.+++++|++.|+++. ..+..|.|||++|+..++.+++++|+++|++
T Consensus 222 ---------------~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~- 284 (301)
T 2b0o_E 222 ---------------KAADGNTALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKECEELLEQAQAG- 284 (301)
T ss_dssp ---------------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCS-CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-
T ss_pred ---------------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-
Confidence 78999999999999999999999999999954 8899999999999999999999999999987
Q ss_pred cccCCCCCCHHHHHHHhcC
Q 037129 208 SHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 208 ~~~~~~g~t~l~~a~~~~~ 226 (227)
.|.||||+|+..||
T Consensus 285 -----~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 285 -----TFAFPLHVDYSWVI 298 (301)
T ss_dssp -----TTSSCCC-------
T ss_pred -----CCCChhHHHHhcCC
Confidence 47899999999886
No 93
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=1.5e-25 Score=169.87 Aligned_cols=139 Identities=18% Similarity=0.148 Sum_probs=120.3
Q ss_pred CHHHHHHHhcCCchHHHhhHhhhhcccc------ccCCCCchhhhhhhhcc---cccccHHHHHHHHHhCCcccccccCC
Q 037129 25 DPIFFNAAAAGNSEPFKDMAGEEIKSLL------TAKTENTILHINIISQE---RENVSTKFVAEILEKCPLLLLQVNAK 95 (227)
Q Consensus 25 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~------~~~~g~t~L~~a~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~ 95 (227)
..+|+.|+..|+++.|+.|++.|.+++. .+..|.||||+| +.. ++.+++++|++. +.+++.+|..
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A--~~~~~~~~~~iv~~Ll~~----gadvn~~d~~ 225 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLA--VKVANQASLPLVDFIIQN----GGHLDAKAAD 225 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHH--HHTCCTTTHHHHHHHHHH----SSCTTCCCTT
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHH--HHhcccCcHHHHHHHHhc----CCCCCCCCCC
Confidence 3569999999999999999999999886 688999999999 876 899999999997 7788999999
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCc
Q 037129 96 DDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPY 175 (227)
Q Consensus 96 g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~ 175 (227)
|+||||+|+..|+.+++++|+++|+.++. ++..|.|||++|+..++.+++++|++.|++
T Consensus 226 G~TpLh~A~~~g~~~~v~~Ll~~gad~~~------------------~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~--- 284 (301)
T 2b0o_E 226 GNTALHYAALYNQPDCLKLLLKGRALVGT------------------VNEAGETALDIARKKHHKECEELLEQAQAG--- 284 (301)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCCSC------------------CCTTSCCHHHHHHHHTCHHHHHHHHHHHHH---
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCCHHHHHHHHHhcCC---
Confidence 99999999999999999999999998765 789999999999999999999999998765
Q ss_pred ccccCCCCHHHHHHHcCcH
Q 037129 176 SANNYGKTPLYMAAESRSS 194 (227)
Q Consensus 176 ~~~~~~~t~l~~A~~~~~~ 194 (227)
.|.||||+|+..|+.
T Consensus 285 ----~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 285 ----TFAFPLHVDYSWVIS 299 (301)
T ss_dssp ----TTSSCCC--------
T ss_pred ----CCCChhHHHHhcCCc
Confidence 478999999988753
No 94
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=5.5e-25 Score=155.37 Aligned_cols=139 Identities=16% Similarity=0.138 Sum_probs=123.2
Q ss_pred ccCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCccccccc-CCCCCHH
Q 037129 22 QQMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVN-AKDDTPL 100 (227)
Q Consensus 22 ~~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~g~tpl 100 (227)
..+.+|||.|+..|+.++++.|++ +.+++..|..|.||||+| +..|+.+++++|++. +.+++.++ ..|+|||
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A--~~~~~~~~v~~Ll~~----ga~~~~~~~~~g~tpL 114 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFV--AGLGSDKCVRLLAEA----GADLDHRDMRGGLTAL 114 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCSSSSCCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCcCCCCCCCCHH
Confidence 345678999999999999999998 999999999999999999 999999999999986 77788787 8899999
Q ss_pred HHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccC
Q 037129 101 HVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNY 180 (227)
Q Consensus 101 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~ 180 (227)
|+|+..|+.+++++|+++|+..+. ++..|.||||+|+..++ ...
T Consensus 115 ~~A~~~~~~~~v~~Ll~~ga~~~~------------------~d~~g~tpl~~A~~~~~------------------~~~ 158 (183)
T 3deo_A 115 HMAAGYVRPEVVEALVELGADIEV------------------EDERGLTALELAREILK------------------TTP 158 (183)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTTC------------------CCTTSCCHHHHHHHHHH------------------TCC
T ss_pred HHHHhcCcHHHHHHHHHcCCCCcC------------------CCCCCCCHHHHHHHhcc------------------Ccc
Confidence 999999999999999999988654 78999999999986322 134
Q ss_pred CCCHHHHHHHcCcHHHHHHHHhc
Q 037129 181 GKTPLYMAAESRSSNMVLALLEN 203 (227)
Q Consensus 181 ~~t~l~~A~~~~~~~~v~~Ll~~ 203 (227)
+.++|++|+..+..+++++|.++
T Consensus 159 ~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 159 KGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHTC
T ss_pred cccHHHHHHHcCHHHHHHHHHHh
Confidence 67899999999999999999865
No 95
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.92 E-value=2.1e-28 Score=190.37 Aligned_cols=156 Identities=13% Similarity=0.073 Sum_probs=113.1
Q ss_pred CHHHHHHHhcCCchHHHhhHhhhhcc---ccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcc---cccccCCCCC
Q 037129 25 DPIFFNAAAAGNSEPFKDMAGEEIKS---LLTAKTENTILHINIISQERENVSTKFVAEILEKCPLL---LLQVNAKDDT 98 (227)
Q Consensus 25 ~~~l~~a~~~g~~~~v~~ll~~~~~~---~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~g~t 98 (227)
.+|||.|+..|+.++|++|++.|... ...+..|.||||+| +..|+.+++++|++. +.+ .+..+.. +|
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~A--a~~G~~eiv~~Ll~~----gad~~~~~i~~~~-~T 165 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLA--AENGHLHVLNRLCEL----APTEIMAMIQAEN-YH 165 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHH--HHTTCHHHHHHHHHS----CTTTHHHHHSHHH-HH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHH--HHcCCHHHHHHHHhC----CCCccccccCCCC-CC
Confidence 47888888888888888888876621 12334567888888 888888888888875 321 1222222 78
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHH-hcCCHHHHHHHHhcCCCCCccc
Q 037129 99 PLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAV-CHQNVDVVEILTKEDPDYPYSA 177 (227)
Q Consensus 99 pl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~-~~~~~~~~~~ll~~~~~~~~~~ 177 (227)
|||+|+..|+.+++++|+++|+.... ...+..|.||||+|+ ..|+.+++++|++.|+
T Consensus 166 pLh~Aa~~G~~eiv~~Ll~~ga~~~~----------------~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga------ 223 (376)
T 2aja_A 166 AFRLAAENGHLHVLNRLCELAPTEAT----------------AMIQAENYYAFRWAAVGRGHHNVINFLLDCPV------ 223 (376)
T ss_dssp HHHHHHHTTCHHHHHHHHHSCGGGHH----------------HHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH------
T ss_pred HHHHHHHCCCHHHHHHHHHcCCccch----------------hccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC------
Confidence 88888888888888888888876431 013455778888888 8888888888887542
Q ss_pred ccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccC
Q 037129 178 NNYGKTPLYMAAESRSSNMVLALLENRTSVSHEG 211 (227)
Q Consensus 178 ~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~ 211 (227)
.|.|||+.|+..|+.+++++|+++|++++..+
T Consensus 224 --~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~ 255 (376)
T 2aja_A 224 --MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH 255 (376)
T ss_dssp --HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHH
T ss_pred --ccchHHHHHHHCCCHHHHHHHHhcCccccccc
Confidence 26788888888888888888888887776554
No 96
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=6.6e-25 Score=161.83 Aligned_cols=141 Identities=16% Similarity=0.123 Sum_probs=125.7
Q ss_pred ccCCHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCccccccc-CCCCCHH
Q 037129 22 QQMDPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVN-AKDDTPL 100 (227)
Q Consensus 22 ~~~~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~g~tpl 100 (227)
..+.+|||.|+..|+.++|+.|++ +.+++..+..|.||||+| +..|+.+++++|++. +.+++.++ ..|+|||
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A--~~~g~~~~v~~Ll~~----ga~~~~~~~~~g~t~L 115 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFV--AGLGSDKCVRLLAEA----GADLDHRDMRGGLTAL 115 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCSSSCCCHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHH--HHCCCHHHHHHHHHc----CCCCCcCCCCCCCCHH
Confidence 445678999999999999999999 999999999999999999 999999999999986 77888888 7899999
Q ss_pred HHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccC
Q 037129 101 HVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNY 180 (227)
Q Consensus 101 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~ 180 (227)
|+|+..|+.+++++|+++|+..+. ++..|.||||+|+..+ ....
T Consensus 116 ~~A~~~g~~~~v~~Ll~~ga~~~~------------------~d~~g~t~l~~A~~~~------------------~~~~ 159 (244)
T 3ui2_A 116 HMAAGYVRPEVVEALVELGADIEV------------------EDERGLTALELAREIL------------------KTTP 159 (244)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHHH------------------TTCC
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCC------------------CCCCCCcHHHHHHHHH------------------hccC
Confidence 999999999999999999988664 7899999999998521 1245
Q ss_pred CCCHHHHHHHcCcHHHHHHHHhcCC
Q 037129 181 GKTPLYMAAESRSSNMVLALLENRT 205 (227)
Q Consensus 181 ~~t~l~~A~~~~~~~~v~~Ll~~g~ 205 (227)
+.|||++|+..|+.+++++|++++.
T Consensus 160 ~~~~l~~a~~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 160 KGNPMQFGRRIGLEKVINVLEGQVF 184 (244)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred CCCHHHHHHHcChHHHHHHHHHhcc
Confidence 7899999999999999999998643
No 97
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.91 E-value=1.2e-26 Score=180.44 Aligned_cols=168 Identities=15% Similarity=0.102 Sum_probs=132.0
Q ss_pred HHHHHHh-cCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHH
Q 037129 27 IFFNAAA-AGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAK 105 (227)
Q Consensus 27 ~l~~a~~-~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~ 105 (227)
.++.|.. .++.+.++++++.|.+. .||||+| +..|+.+++++|++.+.. ....+..+..|.||||+|+.
T Consensus 68 ~~~~a~~~~~~~~~~~~l~~~g~~~-------~T~Lh~A--a~~G~~e~v~~Ll~~ga~-~~~~~~~~~~~~tpL~~Aa~ 137 (376)
T 2aja_A 68 CLYYAHYNRNAKQLWSDAHKKGIKS-------EVICFVA--AITGCSSALDTLCLLLTS-DEIVKVIQAENYQAFRLAAE 137 (376)
T ss_dssp HHHHHHTTTTCTTHHHHHHHHTCCH-------HHHHHHH--HHHCCHHHHHHHTTC--C-CSSCC--CHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHcCCCc-------CCHHHHH--HHcCCHHHHHHHHHcCCc-HHHHHHhccCCCCHHHHHHH
Confidence 4555655 57889999999877663 4999999 999999999999986431 11122345567889999999
Q ss_pred cCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCc-ccccCCCCH
Q 037129 106 FGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPY-SANNYGKTP 184 (227)
Q Consensus 106 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~-~~~~~~~t~ 184 (227)
.|+.+++++|+++|+.... .+....+ .||||+|+..|+.+++++|++.|+++.. ..+..|.||
T Consensus 138 ~G~~eiv~~Ll~~gad~~~---------------~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~Tp 201 (376)
T 2aja_A 138 NGHLHVLNRLCELAPTEIM---------------AMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYA 201 (376)
T ss_dssp TTCHHHHHHHHHSCTTTHH---------------HHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCccc---------------cccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCH
Confidence 9999999999999964211 0111222 8999999999999999999999988442 277789999
Q ss_pred HHHHH-HcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcCC
Q 037129 185 LYMAA-ESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSYA 227 (227)
Q Consensus 185 l~~A~-~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~ 227 (227)
||+|+ ..|+.+++++|+++|++ |.|||++|+.+|+.
T Consensus 202 L~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~~ 238 (376)
T 2aja_A 202 FRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGEK 238 (376)
T ss_dssp HHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTTTTT
T ss_pred HHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHCCCH
Confidence 99999 99999999999998743 78999999998873
No 98
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=1.7e-24 Score=152.90 Aligned_cols=115 Identities=24% Similarity=0.193 Sum_probs=101.8
Q ss_pred cCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCC
Q 037129 93 NAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPD 172 (227)
Q Consensus 93 ~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~ 172 (227)
+..|.||||+|+..|+.+++++|++ |...+. .+..|.||||+|+..|+.+++++|++.|++
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~------------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 101 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDA------------------VDENGRTALLFVAGLGSDKCVRLLAEAGAD 101 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTC------------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCC------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 4567899999999999999999999 766544 688999999999999999999999999999
Q ss_pred CCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 173 YPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 173 ~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
+....+..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++
T Consensus 102 ~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 155 (183)
T 3deo_A 102 LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILK 155 (183)
T ss_dssp TTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHH
T ss_pred CCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhcc
Confidence 653434889999999999999999999999999999999999999999988653
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=3e-25 Score=161.42 Aligned_cols=136 Identities=19% Similarity=0.163 Sum_probs=94.8
Q ss_pred cCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHh-hhcccccchhhhhh
Q 037129 54 AKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVER-AKLTQHENEELESR 132 (227)
Q Consensus 54 ~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~ 132 (227)
+..|.||||+| +..|+.++++.|++. +.+++.++..|+||||+|+..|+.+++++|++. |...+.
T Consensus 70 ~~~g~t~L~~A--~~~g~~~~v~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~-------- 135 (222)
T 3ehr_A 70 AESIDNPLHEA--AKRGNLSWLRECLDN----RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ-------- 135 (222)
T ss_dssp EEEESCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC--------
T ss_pred ccccccccccc--cccCcHHHHHHHHhC----CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc--------
Confidence 44677888888 888888888888774 566777788888888888888888888888887 666544
Q ss_pred HHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCC
Q 037129 133 VGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGP 212 (227)
Q Consensus 133 ~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 212 (227)
++..|.||||+|+..|+.+++++|++.|+++ +..+..|.|||++|+..+..++++.|++.|+.....+.
T Consensus 136 ----------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~ 204 (222)
T 3ehr_A 136 ----------QNKLGDTALHAAAWKGYADIVQLLLAKGART-DLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNA 204 (222)
T ss_dssp ----------CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS-CCCCTTSCCHHHHCCSHHHHHHHC--------------
T ss_pred ----------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccch
Confidence 6777888888888888888888888888874 37777888888888888888888888888877776665
Q ss_pred CC
Q 037129 213 NG 214 (227)
Q Consensus 213 ~g 214 (227)
.|
T Consensus 205 ~~ 206 (222)
T 3ehr_A 205 ED 206 (222)
T ss_dssp --
T ss_pred hh
Confidence 44
No 100
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=2.4e-24 Score=156.63 Aligned_cols=117 Identities=26% Similarity=0.237 Sum_probs=108.0
Q ss_pred cccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhc-
Q 037129 91 QVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKE- 169 (227)
Q Consensus 91 ~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~- 169 (227)
..+..|.||||+|+..|+.+++++|++.|...+. ++..|.||||+|+..|+.+++++|++.
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 129 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNG------------------LDKAGSTALYWACHGGHKDIVEMLFTQP 129 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHTTST
T ss_pred ccccccccccccccccCcHHHHHHHHhCCCCccc------------------cCCCCCCHHHHHHHcCCHHHHHHHHcCC
Confidence 3577889999999999999999999999987654 688999999999999999999999998
Q ss_pred CCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHHHHhcC
Q 037129 170 DPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAAAMRSY 226 (227)
Q Consensus 170 ~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 226 (227)
|+++ +..+..|.||||+|+..|+.+++++|+++|++++.++..|.|||++|+..|+
T Consensus 130 g~~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 185 (222)
T 3ehr_A 130 NIEL-NQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAAC 185 (222)
T ss_dssp TCCC-CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHH
T ss_pred CCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhH
Confidence 7774 4889999999999999999999999999999999999999999999987764
No 101
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=4e-25 Score=162.97 Aligned_cols=109 Identities=25% Similarity=0.236 Sum_probs=55.5
Q ss_pred CCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHH
Q 037129 56 TENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGA 135 (227)
Q Consensus 56 ~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 135 (227)
.|.||||+| +..|+.++++.|++ +.+++.++..|+||||+|+..|+.+++++|+++|+..+.
T Consensus 44 ~g~t~L~~A--~~~g~~~~v~~Ll~-----~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~----------- 105 (244)
T 3ui2_A 44 EYETPWWTA--ARKADEQALSQLLE-----DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH----------- 105 (244)
T ss_dssp HHHHHHHHH--HTTTCHHHHHHTTT-----TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC-----------
T ss_pred CCCCHHHHH--HHcCCHHHHHHHHc-----CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCc-----------
Confidence 445555555 55555555555544 334444555555555555555555555555555544432
Q ss_pred HHHHHHhcc-CCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHH
Q 037129 136 AWQIIRMTN-KEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAE 190 (227)
Q Consensus 136 ~~~~~~~~~-~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~ 190 (227)
.+ ..|.||||+|+..|+.+++++|++.|+++. ..+..|.||||+|+.
T Consensus 106 -------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 106 -------RDMRGGLTALHMAAGYVRPEVVEALVELGADIE-VEDERGLTALELARE 153 (244)
T ss_dssp -------CCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHH
T ss_pred -------CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHH
Confidence 22 445555555555555555555555555522 445555555555543
No 102
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=3.4e-24 Score=141.60 Aligned_cols=109 Identities=19% Similarity=0.156 Sum_probs=69.8
Q ss_pred CCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHH
Q 037129 56 TENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGA 135 (227)
Q Consensus 56 ~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 135 (227)
.|.||||+| +..|+.+++++|++. +.+++..+..|+||||+|+..++.+++++|+++|...+.
T Consensus 6 ~~~~~l~~A--~~~~~~~~v~~ll~~----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----------- 68 (123)
T 3aaa_C 6 MCDKEFMWA--LKNGDLDEVKDYVAK----GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA----------- 68 (123)
T ss_dssp -CHHHHHHH--HHTTCHHHHHHHHHT----TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC-----------
T ss_pred ccchHHHHH--HHcCCHHHHHHHHHc----CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc-----------
Confidence 455666666 666666666666653 445566666666666666666666666666666655443
Q ss_pred HHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHH
Q 037129 136 AWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAA 189 (227)
Q Consensus 136 ~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~ 189 (227)
++..|.||||+|+..++.+++++|++.|+++ +..+..|.|||++|.
T Consensus 69 -------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 69 -------PDKHHITPLLSAVYEGHVSCVKLLLSKGADK-TVKGPDGLTAFEATD 114 (123)
T ss_dssp -------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCC
T ss_pred -------CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHhC
Confidence 5566666777776666666777666666663 356666667776663
No 103
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=1.1e-22 Score=127.53 Aligned_cols=93 Identities=32% Similarity=0.490 Sum_probs=85.6
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCC
Q 037129 95 KDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYP 174 (227)
Q Consensus 95 ~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~ 174 (227)
+|+||||+|+..|+.+++++|++.|...+. ++..|.||||+|+..++.+++++|++.|+++.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~------------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 62 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNA------------------KDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 62 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcc------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 488999999999999999999999988664 78899999999999999999999999999954
Q ss_pred cccccCCCCHHHHHHHcCcHHHHHHHHhcCCC
Q 037129 175 YSANNYGKTPLYMAAESRSSNMVLALLENRTS 206 (227)
Q Consensus 175 ~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~ 206 (227)
.++..|.||||+|+..++.+++++|+++|++
T Consensus 63 -~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 63 -AKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp -CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred -ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 8899999999999999999999999999975
No 104
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=3.6e-23 Score=167.24 Aligned_cols=127 Identities=17% Similarity=0.179 Sum_probs=99.0
Q ss_pred HHHHHHHhcCCchHHHhhHhhhhccccc------cCCCCchhhhhhh-hcccccccHHHHHHHHHhCCcccccccCCCCC
Q 037129 26 PIFFNAAAAGNSEPFKDMAGEEIKSLLT------AKTENTILHINII-SQERENVSTKFVAEILEKCPLLLLQVNAKDDT 98 (227)
Q Consensus 26 ~~l~~a~~~g~~~~v~~ll~~~~~~~~~------~~~g~t~L~~a~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t 98 (227)
..|+.|+..|+++.|+.|++.|.+++.. +..|.||||+||. +..|+.+++++|++. +.+++.+|..|+|
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~----ga~vn~~d~~g~T 209 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN----GGHLDAKAADGNT 209 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH----SCCTTCCCSSSCC
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc----CCCCCccCCCCCc
Confidence 4588888888888888888888887755 6678888888843 337788888888876 6777888888888
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCC
Q 037129 99 PLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYP 174 (227)
Q Consensus 99 pl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~ 174 (227)
|||+|+..|+.+++++|+++|++.+. ++..|.||||+|+..|+.+++++|++.|++..
T Consensus 210 pLh~A~~~g~~~~v~~Ll~~ga~~~~------------------~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 267 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLKGRALVGT------------------VNEAGETALDIARKKHHKECEELLEQAQAGTF 267 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHHTCCCCSC------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTCC---
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCC
Confidence 88888888888888888888887654 67788888888888888888888888887743
No 105
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.89 E-value=3.3e-23 Score=135.18 Aligned_cols=109 Identities=25% Similarity=0.309 Sum_probs=99.1
Q ss_pred cccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcC
Q 037129 91 QVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKED 170 (227)
Q Consensus 91 ~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~ 170 (227)
.+|..|+||||+|+..|+.+++++|+++|...+. .+..|.||||+|+..++.+++++|++.|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------------------~d~~g~t~L~~A~~~~~~~~~~~Ll~~g 65 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNA------------------RSKDGNTPLHLAAKNGHAEIVKLLLAKG 65 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSC------------------CCSSSCCTTHHHHTTTCHHHHHHHTTTT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC------------------cCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 4688999999999999999999999999987654 6889999999999999999999999999
Q ss_pred CCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHH
Q 037129 171 PDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTAL 218 (227)
Q Consensus 171 ~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 218 (227)
+++. ..+..|.||||+|+..++.+++++|+++|++++.++..|.+|-
T Consensus 66 ~~~~-~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 66 ADVN-ARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp CCTT-CCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CCCc-ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 9854 7888999999999999999999999999999999999998874
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=8.9e-23 Score=164.94 Aligned_cols=131 Identities=21% Similarity=0.146 Sum_probs=113.9
Q ss_pred CCchhhhhhhhcccccccHHHHHHHHHhCCcccccc------cCCCCCHHHHHHH---cCCHHHHHHHHHhhhcccccch
Q 037129 57 ENTILHINIISQERENVSTKFVAEILEKCPLLLLQV------NAKDDTPLHVAAK---FGHSDIVRFLVERAKLTQHENE 127 (227)
Q Consensus 57 g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~g~tpl~~A~~---~~~~~~v~~Ll~~~~~~~~~~~ 127 (227)
..+.||.| +..|+.+.++.|++. +.+++.. +..|+||||+|+. .|+.+++++|+++|++.+.
T Consensus 132 ~~~~L~~A--~~~g~~~~v~~ll~~----g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~--- 202 (497)
T 3lvq_E 132 EPQRLWTA--ICNRDLLSVLEAFAN----GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA--- 202 (497)
T ss_dssp CHHHHHHH--HHHTCHHHHHHHHHT----TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTC---
T ss_pred cHHHHHHH--HhccCHHHHHHHHhh----cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCc---
Confidence 34779999 999999999999986 5666665 7889999999976 9999999999999998765
Q ss_pred hhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCC
Q 037129 128 ELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSV 207 (227)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~ 207 (227)
++..|.||||+|+..|+.+++++|++.|+++. ..+..|.||||+|+..++.+++++|+++|+++
T Consensus 203 ---------------~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 266 (497)
T 3lvq_E 203 ---------------KAADGNTALHYAALYNQPDCLKLLLKGRALVG-TVNEAGETALDIARKKHHKECEELLEQAQAGT 266 (497)
T ss_dssp ---------------CCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCS-CCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--
T ss_pred ---------------cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC
Confidence 78999999999999999999999999999954 88999999999999999999999999999999
Q ss_pred cccCC
Q 037129 208 SHEGP 212 (227)
Q Consensus 208 ~~~~~ 212 (227)
+....
T Consensus 267 ~~~~~ 271 (497)
T 3lvq_E 267 FAFPL 271 (497)
T ss_dssp -----
T ss_pred CCCcc
Confidence 87433
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.89 E-value=5.4e-23 Score=159.42 Aligned_cols=141 Identities=16% Similarity=0.186 Sum_probs=82.2
Q ss_pred HHHHHHHhc-CCchHHHhhHhhhhcccccc--CCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHH
Q 037129 26 PIFFNAAAA-GNSEPFKDMAGEEIKSLLTA--KTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHV 102 (227)
Q Consensus 26 ~~l~~a~~~-g~~~~v~~ll~~~~~~~~~~--~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~ 102 (227)
++||.|+.. |++++|+.|++.|.+++..+ ..|.||||+| +..++.+++++|++. +.+++..|..|+||||+
T Consensus 201 t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~A--a~~g~~~iv~~LL~~----Gadvn~~d~~G~TpLh~ 274 (368)
T 3jue_A 201 ALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQA--TAANSLLACEFLLQN----GANVNQADSAGRGPLHH 274 (368)
T ss_dssp HHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHH--HHTTCHHHHHHHHHT----TCCTTCCCTTSCCHHHH
T ss_pred cHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHH--HHCCCHHHHHHHHHc----CCCCCCCCCCCCCHHHH
Confidence 466777776 77777777777666666555 5666777777 667777777766664 55666666677777777
Q ss_pred HHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCC--CcccccC
Q 037129 103 AAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDY--PYSANNY 180 (227)
Q Consensus 103 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~--~~~~~~~ 180 (227)
|+..|+.+++++|+++|+..+. .+..|.||||+|+..++.+++++|+..+... ....+..
T Consensus 275 A~~~g~~~~v~~LL~~Gad~~~------------------~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~ 336 (368)
T 3jue_A 275 ATILGHTGLACLFLKRGADLGA------------------RDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAG 336 (368)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------
T ss_pred HHHcCcHHHHHHHHHCcCCCCC------------------cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCC
Confidence 7777777777777777666543 5666677777777777777777766554321 1123334
Q ss_pred CCCHHHHHHH
Q 037129 181 GKTPLYMAAE 190 (227)
Q Consensus 181 ~~t~l~~A~~ 190 (227)
+.|+++.+..
T Consensus 337 ~~t~l~i~~~ 346 (368)
T 3jue_A 337 DETYLDIFRD 346 (368)
T ss_dssp ----------
T ss_pred CCCHHHHHHH
Confidence 5555555443
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.89 E-value=9.4e-23 Score=158.08 Aligned_cols=144 Identities=17% Similarity=0.163 Sum_probs=114.4
Q ss_pred cCCCCchhhhhhhhcc-cccccHHHHHHHHHhCCccccccc--CCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhh
Q 037129 54 AKTENTILHINIISQE-RENVSTKFVAEILEKCPLLLLQVN--AKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELE 130 (227)
Q Consensus 54 ~~~g~t~L~~a~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~--~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 130 (227)
...+.++||.| +.. ++.++++.|++. +.+++..+ ..|.||||+|+..|+.+++++|+++|++.+.
T Consensus 196 ~~~~~t~L~~A--a~~~g~~~~v~~LL~~----Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~------ 263 (368)
T 3jue_A 196 SLHPGALLFRA--SGHPPSLPTMADALAH----GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ------ 263 (368)
T ss_dssp -CCHHHHHHHH--TSSSCCHHHHHHHHHT----TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------
T ss_pred cCCCCcHHHHH--HHccCCHHHHHHHHHc----CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC------
Confidence 33456899999 999 999999999986 77788887 8899999999999999999999999988765
Q ss_pred hhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcC---CCC
Q 037129 131 SRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENR---TSV 207 (227)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g---~~~ 207 (227)
.+..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..++.+++++|+..+ .+.
T Consensus 264 ------------~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~-~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~ 330 (368)
T 3jue_A 264 ------------ADSAGRGPLHHATILGHTGLACLFLKRGADL-GARDSEGRDPLTIAMETANADIVTLLRLAKMREAEA 330 (368)
T ss_dssp ------------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----
T ss_pred ------------CCCCCCCHHHHHHHcCcHHHHHHHHHCcCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccc
Confidence 7899999999999999999999999999995 488999999999999999999999999876 444
Q ss_pred cccCCCCCCHHHHHH
Q 037129 208 SHEGPNGKTALHAAA 222 (227)
Q Consensus 208 ~~~~~~g~t~l~~a~ 222 (227)
...+..+.|+++.+.
T Consensus 331 ~~~~~~~~t~l~i~~ 345 (368)
T 3jue_A 331 AQGQAGDETYLDIFR 345 (368)
T ss_dssp ---------------
T ss_pred cccCCCCCCHHHHHH
Confidence 455666778877654
No 109
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=3.2e-22 Score=150.07 Aligned_cols=123 Identities=15% Similarity=0.131 Sum_probs=107.8
Q ss_pred HHHHHHHhcCCchHHHhhHhhhhccc------cccCCCCchhhhhhhhcc---cccccHHHHHHHHHhCCcccccccCCC
Q 037129 26 PIFFNAAAAGNSEPFKDMAGEEIKSL------LTAKTENTILHINIISQE---RENVSTKFVAEILEKCPLLLLQVNAKD 96 (227)
Q Consensus 26 ~~l~~a~~~g~~~~v~~ll~~~~~~~------~~~~~g~t~L~~a~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~g 96 (227)
.+|+.|+..|+.+.++.+++.|.+++ ..+..|.||||+| +.. ++.+++++|++. +.+++.+|..|
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A--~~~~~~~~~~~v~~Ll~~----ga~in~~d~~g 205 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLA--VRSVDRTSLHIVDFLVQN----SGNLDKQTGKG 205 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHH--HHHCCTTTHHHHHHHHHH----CSCTTCCCTTC
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHH--HHhcccchHHHHHHHHHC----CCCccccCCCC
Confidence 46899999999999999999888854 3367899999999 888 889999999987 77888899999
Q ss_pred CCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCC
Q 037129 97 DTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPD 172 (227)
Q Consensus 97 ~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~ 172 (227)
+||||+|+..|+.+++++|+++|++.+. ++..|.||||+|+..|+.+++++|++.|++
T Consensus 206 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~------------------~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 206 STALHYCCLTDNAECLKLLLRGKASIEI------------------ANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC------------------CCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCC------------------ccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999988665 788899999999999999999999988775
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.87 E-value=1.2e-21 Score=146.94 Aligned_cols=129 Identities=21% Similarity=0.184 Sum_probs=108.8
Q ss_pred CchhhhhhhhcccccccHHHHHHHHHhCCcc--cccccCCCCCHHHHHHHc---CCHHHHHHHHHhhhcccccchhhhhh
Q 037129 58 NTILHINIISQERENVSTKFVAEILEKCPLL--LLQVNAKDDTPLHVAAKF---GHSDIVRFLVERAKLTQHENEELESR 132 (227)
Q Consensus 58 ~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~g~tpl~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~~~ 132 (227)
.++|+.| +..++.+.++.+++.+...... ++..+..|+||||+|+.. ++.+++++|+++|+.++.
T Consensus 131 l~~l~~a--~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~-------- 200 (278)
T 1dcq_A 131 LHSLCEA--VKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDK-------- 200 (278)
T ss_dssp HHHHHHH--HHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC--------
T ss_pred hhhhhhH--hhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccc--------
Confidence 4678899 9999998888887752211111 445578899999999999 899999999999988665
Q ss_pred HHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCC
Q 037129 133 VGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSV 207 (227)
Q Consensus 133 ~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~ 207 (227)
++..|.||||+|+..|+.+++++|++.|+++ +..+..|.||||+|+..++.+++++|+++|++.
T Consensus 201 ----------~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 201 ----------QTGKGSTALHYCCLTDNAECLKLLLRGKASI-EIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp ----------CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred ----------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 7889999999999999999999999999995 488999999999999999999999999998764
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=1.1e-21 Score=122.95 Aligned_cols=91 Identities=26% Similarity=0.376 Sum_probs=49.2
Q ss_pred CCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHH
Q 037129 57 ENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAA 136 (227)
Q Consensus 57 g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 136 (227)
|.||||+| +..++.+++++|++. +.+++.++..|+||||+|+..|+.+++++|+++|+..+.
T Consensus 2 g~t~L~~A--~~~~~~~~v~~Ll~~----g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------------ 63 (93)
T 1n0q_A 2 GRTPLHLA--ARNGHLEVVKLLLEA----GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA------------ 63 (93)
T ss_dssp -CCHHHHH--HHHTCHHHHHHHHHT----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------------
T ss_pred CCcHHHHH--HHcCCHHHHHHHHHc----CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------------
Confidence 45555555 555555555555543 444555555555555555555555555555555554332
Q ss_pred HHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCC
Q 037129 137 WQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDP 171 (227)
Q Consensus 137 ~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~ 171 (227)
++..|.||||+|+..++.+++++|++.|+
T Consensus 64 ------~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 64 ------KDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp ------CCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred ------cCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 44555555555555555555555555543
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=3.5e-21 Score=125.51 Aligned_cols=108 Identities=24% Similarity=0.275 Sum_probs=75.0
Q ss_pred cccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhh
Q 037129 52 LTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELES 131 (227)
Q Consensus 52 ~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 131 (227)
+.|..|.||||+| +..++.+++++|++. +.+++..+..|+||||+|+..++.+++++|+++|...+.
T Consensus 4 ~~d~~g~t~L~~A--~~~~~~~~~~~Ll~~----g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~------- 70 (115)
T 2l6b_A 4 WGSKDGNTPLHNA--AKNGHAEEVKKLLSK----GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA------- 70 (115)
T ss_dssp CCSCSSCCHHHHH--HHHTCHHHHHHHTTT----TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC-------
T ss_pred ccCCCCCCHHHHH--HHcCCHHHHHHHHHc----CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc-------
Confidence 4566777777777 777777777777764 555666777777777777777777777777777766543
Q ss_pred hHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCH
Q 037129 132 RVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTP 184 (227)
Q Consensus 132 ~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~ 184 (227)
++..|.||||+|+..++.+++++|++.|+++. ..+..|.+|
T Consensus 71 -----------~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n-~~~~~~~~~ 111 (115)
T 2l6b_A 71 -----------RSKDGNTPEHLAKKNGHHEIVKLLDAKGADVN-ARSWGSSHH 111 (115)
T ss_dssp -----------CCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHH-HHSCCCC--
T ss_pred -----------cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC-cCCcccccc
Confidence 56677777777777777777777777777743 555566555
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.79 E-value=6.5e-19 Score=113.75 Aligned_cols=91 Identities=23% Similarity=0.372 Sum_probs=64.7
Q ss_pred cccCCCCCHHHHHHHcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCHHHHHHHHhcC
Q 037129 91 QVNAKDDTPLHVAAKFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNVDVVEILTKED 170 (227)
Q Consensus 91 ~~~~~g~tpl~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~~~~~~ll~~~ 170 (227)
..+..|.||||+|+..|+.+++++|++.|...+. ++..|.||||+|+..++.+++++|++.|
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~------------------~d~~g~tpLh~A~~~~~~~~v~~Ll~~g 80 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAA------------------KDKNGSTPLHLAARNGHLEVVKLLLEAG 80 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTC------------------CCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCc------------------cCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 4566677777777777777777777777766543 5677777777777777777777777777
Q ss_pred CCCCcccccCCCCHHHHHHHcCcHHHHHHH
Q 037129 171 PDYPYSANNYGKTPLYMAAESRSSNMVLAL 200 (227)
Q Consensus 171 ~~~~~~~~~~~~t~l~~A~~~~~~~~v~~L 200 (227)
+++. ..+..|.||||+|+..++.+++++|
T Consensus 81 a~~~-~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 81 ADVX-AQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCTT-CCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CCcc-ccccCCCcHHHHHHHcCCHHHHHHh
Confidence 7743 6677777777777777777777765
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.77 E-value=2e-18 Score=111.42 Aligned_cols=84 Identities=27% Similarity=0.298 Sum_probs=77.4
Q ss_pred hccCCCCcHHHHHHhcCCHHHHHHHHhcCCCCCcccccCCCCHHHHHHHcCcHHHHHHHHhcCCCCcccCCCCCCHHHHH
Q 037129 142 MTNKEKNTALHEAVCHQNVDVVEILTKEDPDYPYSANNYGKTPLYMAAESRSSNMVLALLENRTSVSHEGPNGKTALHAA 221 (227)
Q Consensus 142 ~~~~~~~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~t~l~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a 221 (227)
..+.+|.|+||+|+..|+.+++++|++.|+++. ..+..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~-~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVA-AKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 467899999999999999999999999999854 7789999999999999999999999999999999999999999999
Q ss_pred HHhcC
Q 037129 222 AMRSY 226 (227)
Q Consensus 222 ~~~~~ 226 (227)
+..|+
T Consensus 98 ~~~~~ 102 (110)
T 2zgd_A 98 IDNGN 102 (110)
T ss_dssp HHHTC
T ss_pred HHcCC
Confidence 99886
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=74.53 E-value=1.2 Score=21.59 Aligned_cols=24 Identities=17% Similarity=0.354 Sum_probs=18.4
Q ss_pred ccCCHHHHHHHhcCCchHHHhhHh
Q 037129 22 QQMDPIFFNAAAAGNSEPFKDMAG 45 (227)
Q Consensus 22 ~~~~~~l~~a~~~g~~~~v~~ll~ 45 (227)
....-.++.||..|++++++.|-.
T Consensus 11 ~aiEQqiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 11 DAIRKQMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHH
Confidence 344456888999999999988865
No 116
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=46.37 E-value=11 Score=30.31 Aligned_cols=91 Identities=14% Similarity=0.010 Sum_probs=58.3
Q ss_pred hhccCCHHHHHHHhcCCchHHHhhHh----hhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCC
Q 037129 20 IKQQMDPIFFNAAAAGNSEPFKDMAG----EEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAK 95 (227)
Q Consensus 20 ~~~~~~~~l~~a~~~g~~~~v~~ll~----~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 95 (227)
|...++..+...+..|+++....+++ .|+.++... .++.|... ++.|+.+....+.+.+...+... |..
T Consensus 104 d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t--yn~lI~~~--~~~g~~~~A~~l~~~M~~~G~~P---d~~ 176 (501)
T 4g26_A 104 NEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS--YGPALFGF--CRKGDADKAYEVDAHMVESEVVP---EEP 176 (501)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH--HHHHHHHH--HHTTCHHHHHHHHHHHHHTTCCC---CHH
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce--ehHHHHHH--HHCCCHHHHHHHHHHHHhcCCCC---CHH
Confidence 45556777888899999887666665 566654433 23455556 88899888888888776655432 222
Q ss_pred CC-CHHHHHHHcCCHHHHHHHHH
Q 037129 96 DD-TPLHVAAKFGHSDIVRFLVE 117 (227)
Q Consensus 96 g~-tpl~~A~~~~~~~~v~~Ll~ 117 (227)
.+ +.+...++.|..+-+..+++
T Consensus 177 ty~~Li~~~~~~g~~d~A~~ll~ 199 (501)
T 4g26_A 177 ELAALLKVSMDTKNADKVYKTLQ 199 (501)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCHHHHHHHHH
Confidence 22 34445677888765555544
No 117
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=45.47 E-value=11 Score=30.37 Aligned_cols=72 Identities=8% Similarity=0.003 Sum_probs=43.7
Q ss_pred hHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCC-HHHHHHHcCCHHHHHHHH
Q 037129 38 EPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDT-PLHVAAKFGHSDIVRFLV 116 (227)
Q Consensus 38 ~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~t-pl~~A~~~~~~~~v~~Ll 116 (227)
++++.+...|+.++... .++.+... ++.|+.+....+++.+...+... +...++ .|...++.|..+-+..++
T Consensus 91 ~lf~~M~~~G~~Pd~~t--yn~lI~~~--~~~g~~~~A~~l~~~M~~~g~~P---d~~tyn~lI~~~~~~g~~~~A~~l~ 163 (501)
T 4g26_A 91 DIFKQMIVDKVVPNEAT--FTNGARLA--VAKDDPEMAFDMVKQMKAFGIQP---RLRSYGPALFGFCRKGDADKAYEVD 163 (501)
T ss_dssp HHHHHHHHTTCCCCHHH--HHHHHHHH--HHHTCHHHHHHHHHHHHHTTCCC---CHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCHHH--HHHHHHHH--HhcCCHHHHHHHHHHHHHcCCCC---ccceehHHHHHHHHCCCHHHHHHHH
Confidence 35666666777765443 23555666 88899988888888776655432 222233 444567788875444333
No 118
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=37.42 E-value=1e+02 Score=24.13 Aligned_cols=65 Identities=14% Similarity=0.125 Sum_probs=44.2
Q ss_pred HHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHHHcCCH
Q 037129 30 NAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAAKFGHS 109 (227)
Q Consensus 30 ~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~~~~~~ 109 (227)
..+..|+...|...+..|.|++.. .|.-..+ ..++. + ....|.|.+|+|+++.+.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~----lt~~e~~--lln~~------------------~-af~~g~tlvhlair~~r~ 82 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQ----LTADEVR--LLNRP------------------S-AFDVGYTLVHLAIRFQRQ 82 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCC----CCHHHHH--HHCCT------------------T-TCCTTCCHHHHHHHTTCH
T ss_pred HHHHcCChhHHHHHHhcCCchhcc----cCHHHHH--HhCCC------------------c-ccccCchhhhhhhhhhhh
Confidence 456788999999999888775422 2333333 11111 1 244688999999999999
Q ss_pred HHHHHHHHhh
Q 037129 110 DIVRFLVERA 119 (227)
Q Consensus 110 ~~v~~Ll~~~ 119 (227)
+++..|+..+
T Consensus 83 ~~l~~ll~~~ 92 (454)
T 3zrh_A 83 DMLAILLTEV 92 (454)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHhhhcc
Confidence 9999999744
No 119
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=26.00 E-value=2.1e+02 Score=22.48 Aligned_cols=48 Identities=21% Similarity=0.255 Sum_probs=36.3
Q ss_pred HhcCCHHHHHHHHhcCCCCCcc-------------cccCCCCHHHHHHHcCcHHHHHHHHh
Q 037129 155 VCHQNVDVVEILTKEDPDYPYS-------------ANNYGKTPLYMAAESRSSNMVLALLE 202 (227)
Q Consensus 155 ~~~~~~~~~~~ll~~~~~~~~~-------------~~~~~~t~l~~A~~~~~~~~v~~Ll~ 202 (227)
+.-|+...|+..+..|.+.... ...-|.|.+|.|++..+-+++..|+.
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 3457778888777776664322 23469999999999999999998886
No 120
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=21.51 E-value=1.9e+02 Score=19.48 Aligned_cols=134 Identities=13% Similarity=0.071 Sum_probs=74.6
Q ss_pred CHHHHHHHhcCCchHHHhhHhhhhccccccCCCCchhhhhhhhcccccccHHHHHHHHHhCCcccccccCCCCCHHHHHH
Q 037129 25 DPIFFNAAAAGNSEPFKDMAGEEIKSLLTAKTENTILHINIISQERENVSTKFVAEILEKCPLLLLQVNAKDDTPLHVAA 104 (227)
Q Consensus 25 ~~~l~~a~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~tpl~~A~ 104 (227)
..-|-.|+..|+++....+.+.--+ .. .....=..| ...|+.++++...... .|. ...+.+..
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l~~---~~-~Wk~Lg~~A--L~~gn~~lAe~cy~~~---------~D~--~~L~~Ly~ 71 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKLND---SI-TWERLIQEA--LAQGNASLAEMIYQTQ---------HSF--DKLSFLYL 71 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHCC---HH-HHHHHHHHH--HHTTCHHHHHHHHHHT---------TCH--HHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHhCC---HH-HHHHHHHHH--HHcCChHHHHHHHHHh---------CCH--HHHHHHHH
Confidence 3457788888888888777653211 10 112333456 7777777777666641 111 12345555
Q ss_pred HcCCHHHHHHHHHhhhcccccchhhhhhHHHHHHHHHhccCCCCcHHHHHHhcCCH-HHHHHHHhcCCCCCcccccCCCC
Q 037129 105 KFGHSDIVRFLVERAKLTQHENEELESRVGAAWQIIRMTNKEKNTALHEAVCHQNV-DVVEILTKEDPDYPYSANNYGKT 183 (227)
Q Consensus 105 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~~~~-~~~~~ll~~~~~~~~~~~~~~~t 183 (227)
..|+.+-++.+.+.-. ...+....++.+...|.+ ++++.|.+.|.- .-
T Consensus 72 ~tg~~e~L~kla~iA~----------------------~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~---------~e 120 (177)
T 3mkq_B 72 VTGDVNKLSKMQNIAQ----------------------TREDFGSMLLNTFYNNSTKERSSIFAEGGSL---------PL 120 (177)
T ss_dssp HHTCHHHHHHHHHHHH----------------------HTTCHHHHHHHHHHHTCHHHHHHHHHHTTCH---------HH
T ss_pred HhCCHHHHHHHHHHHH----------------------HCccHHHHHHHHHHcCCHHHHHHHHHHCCCh---------HH
Confidence 5666655555544321 123334456666666666 466666654322 12
Q ss_pred HHHHHHHcCcHHHHHHHHh-cCCC
Q 037129 184 PLYMAAESRSSNMVLALLE-NRTS 206 (227)
Q Consensus 184 ~l~~A~~~~~~~~v~~Ll~-~g~~ 206 (227)
+..+|.-+|..+..+-+++ .|.+
T Consensus 121 A~~~A~t~g~~~~a~~~~~~~~~~ 144 (177)
T 3mkq_B 121 AYAVAKANGDEAAASAFLEQAEVD 144 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCcHHHHHHHHHHhCCc
Confidence 4567777888888877764 4533
No 121
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=20.08 E-value=70 Score=24.16 Aligned_cols=100 Identities=10% Similarity=-0.068 Sum_probs=54.9
Q ss_pred CcccccccccchhhhccCCHHHHHHHhcCCchHHHhhHhh---hhccccccCCCCchhhhhhhhcccccccHHHHHHHHH
Q 037129 7 EIEEAPLLDSNREIKQQMDPIFFNAAAAGNSEPFKDMAGE---EIKSLLTAKTENTILHINIISQERENVSTKFVAEILE 83 (227)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~g~~~~v~~ll~~---~~~~~~~~~~g~t~L~~a~~~~~~~~~~~~~l~~~~~ 83 (227)
+++++..-...-.....+...+......++.+..+.+++. .+-....|..|+..+.-. ...+..+....+++.+.
T Consensus 20 ~l~~~~g~i~~la~dq~gsR~lQ~~l~~~~~~~~~~i~~ei~~~~~~L~~d~~gn~vvQkl--le~~~~~~~~~i~~~i~ 97 (351)
T 3gvo_A 20 QLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKF--FEFGSLDQKLALATRIR 97 (351)
T ss_dssp CGGGGTTCHHHHHTSHHHHHHHHHHHHHCCHHHHHHHHHHHGGGHHHHHTSTTHHHHHHHH--HHHCCHHHHHHHHHHHT
T ss_pred CHHHHHhHHHHHhcCCcchHHHHHHHhhCCHHHHHHHHHHHHHhHHHHHhChhhhHHHHHH--HhhCCHHHHHHHHHHHH
Confidence 3444433333333334445556667777777766666651 222226778888888887 77777777777766542
Q ss_pred hCCcccc-cccCCCCCHHHHHHHcCCHH
Q 037129 84 KCPLLLL-QVNAKDDTPLHVAAKFGHSD 110 (227)
Q Consensus 84 ~~~~~~~-~~~~~g~tpl~~A~~~~~~~ 110 (227)
+..+. ..+..|...+..+......+
T Consensus 98 --g~~~~l~~~~~G~rvvQk~le~~~~~ 123 (351)
T 3gvo_A 98 --GHVLPLALQMYGCRVIQKALESISSD 123 (351)
T ss_dssp --TCHHHHHTSTTHHHHHHHHHHHSCHH
T ss_pred --hhHHHHhhCHHhHHHHHHHHHhCCHH
Confidence 22211 23455555555555544443
Done!