BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037130
(252 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 44/71 (61%)
Query: 76 KYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFSVISFAPYG 135
KYGPI+++++G K ++V + ++AKE K F+ RP+ +++ N I+FA G
Sbjct: 41 KYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSG 100
Query: 136 NYWRQSRKIAI 146
+W+ R++A+
Sbjct: 101 AHWQLHRRLAM 111
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 75 DKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFSVISFAPY 134
+KYG +FT+ LG + +++ E +E +AF+ R K ++ + VI FA
Sbjct: 41 EKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVI-FA-N 98
Query: 135 GNYWRQSRKIAIIELLSSHRLEKLKHVRESEVKASIQRLYKSCIXXXXXRKVVLVDMIHW 194
GN W+ R+ ++ + + + + V+ IQ + I K L+D
Sbjct: 99 GNRWKVLRRFSVTTM-------RDFGMGKRSVEERIQEEAQCLIEELRKSKGALMDPTFL 151
Query: 195 LEGTVLDVVLRIIAGKRHNSQSQE----VNDWQRQITKFTALTGQ 235
+ +++ I+ GKR + Q QE +N + + + +++ GQ
Sbjct: 152 FQSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQ 196
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 26/190 (13%)
Query: 70 LGDMADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFSVI 129
L M+ +YG + +++G +V+S + ++ F RP L+ N +
Sbjct: 36 LSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLYTFTLIS-NGQSM 94
Query: 130 SFAP-YGNYWRQSRKIAIIELLS-----------SHRLEKLKHV-RESEVKAS-IQRLYK 175
SF+P G W R++A L S S LE +HV +E+EV S +Q L
Sbjct: 95 SFSPDSGPVWAARRRLAQNGLKSFSIASDPASSTSCYLE--EHVSKEAEVLISTLQELMA 152
Query: 176 SCIXXXXXRKVVLVDMIHWLEGTVLDVVLRIIAGKRHNSQSQEVNDWQRQITKFTALTGQ 235
R VV+ +V +V+ I G+R++ QE+ F + G
Sbjct: 153 GPGHFNPYRYVVV---------SVTNVICAICFGRRYDHNHQELLSLVNLNNNFGEVVGS 203
Query: 236 FVVSDALPVF 245
+D +P+
Sbjct: 204 GNPADFIPIL 213
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 73 MADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELL--GYNFSVIS 130
++++YGP+FT+ LG ++ +V+ + KE + F+ R + + L GY ++
Sbjct: 39 ISERYGPVFTIHLGPRRVVVLCGHDAVKEALVDQAEEFSGRGEQATFDWLFKGYG---VA 95
Query: 131 FAPYGNYWRQSRKIAIIELLSSHRLEKLKHVRESEVKASIQRLYKSCIXXXXXRKVVLVD 190
F+ G +Q R+ +I L V + ++ IQ I +D
Sbjct: 96 FS-NGERAKQLRRFSIATLRGF-------GVGKRGIEERIQEEAGFLIDALRGTHGANID 147
Query: 191 MIHWLEGTVLDVVLRIIAGKRHNSQSQEVNDWQRQIT---KFTAL-TGQ 235
+L TV +V+ I+ G R + + +E R + +FTA TGQ
Sbjct: 148 PTFFLSRTVSNVISSIVFGDRFDYEDKEFLSLLRMMLGSFQFTATSTGQ 196
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 68 RVLGDMADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFS 127
+ L +++ YGP+FT+ G+++ +V+ +E+ KE + F+ R E F
Sbjct: 35 KSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALIDLGEEFSGRGHFPLAERANRGFG 94
Query: 128 VISFAPYGNYWRQSRKIAIIELLSSHRLEKLKHVR-ESEVKASIQRLYKSCIXXXXXRKV 186
++ F+ G W++ R+ +++ L + ++ R + E + ++ L K+ K
Sbjct: 95 IV-FS-NGKRWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKT--------KA 144
Query: 187 VLVDMIHWLEGTVLDVVLRIIAGKRHNSQSQE 218
D L +V+ II KR + + Q+
Sbjct: 145 SPCDPTFILGCAPCNVICSIIFQKRFDYKDQQ 176
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 77 YGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKT---MAMELLGYNFSVISFAP 133
YG IF++ LG +V++ +++ KEC + FA RP M M +G + +
Sbjct: 47 YGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLN----SR 102
Query: 134 YGNYWRQSRKIAI 146
YG W R++A+
Sbjct: 103 YGRGWVDHRRLAV 115
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 77 YGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKT---MAMELLGYNFSVISFAP 133
YG IF++ LG +V++ +++ KEC + FA RP M M +G + +
Sbjct: 47 YGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLN----SR 102
Query: 134 YGNYWRQSRKIAI 146
YG W R++A+
Sbjct: 103 YGRGWVDHRRLAV 115
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 62/141 (43%), Gaps = 9/141 (6%)
Query: 73 MADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFSVISFA 132
+ +KYG +FT+ LG + +V+ + +E +AF+ R K ++ + + VI FA
Sbjct: 39 LREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVI-FA 97
Query: 133 PYGNYWRQSRKIAIIELLSSHRLEKLKHVRESEVKASIQRLYKSCIXXXXXRKVVLVDMI 192
G WR R+ ++ + + + + V+ IQ + + K L+D
Sbjct: 98 -NGERWRALRRFSLATM-------RDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 193 HWLEGTVLDVVLRIIAGKRHN 213
+++ I+ GKR +
Sbjct: 150 LLFHSITSNIICSIVFGKRFD 170
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 62/141 (43%), Gaps = 9/141 (6%)
Query: 73 MADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFSVISFA 132
+ +KYG +FT+ LG + +V+ + +E +AF+ R K ++ + + VI FA
Sbjct: 39 LREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVI-FA 97
Query: 133 PYGNYWRQSRKIAIIELLSSHRLEKLKHVRESEVKASIQRLYKSCIXXXXXRKVVLVDMI 192
G WR R+ ++ + + + + V+ IQ + + K L+D
Sbjct: 98 -NGERWRALRRFSLATM-------RDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 193 HWLEGTVLDVVLRIIAGKRHN 213
+++ I+ GKR +
Sbjct: 150 LLFHSITSNIICSIVFGKRFD 170
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 68 RVLGDMADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFS 127
+ L ++ YGP+FT+ LG+K +V+ +E KE + FA R +E +
Sbjct: 34 KSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALVDLGEEFAGRGSVPILEKVSKGLG 93
Query: 128 VISFAPYGNYWRQSRKIAIIEL 149
I+F+ W++ R+ +++ L
Sbjct: 94 -IAFS-NAKTWKEMRRFSLMTL 113
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 62/141 (43%), Gaps = 9/141 (6%)
Query: 73 MADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFSVISFA 132
+ +KYG +FT+ LG + +V+ + +E +AF+ R K ++ + + VI FA
Sbjct: 39 LREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVI-FA 97
Query: 133 PYGNYWRQSRKIAIIELLSSHRLEKLKHVRESEVKASIQRLYKSCIXXXXXRKVVLVDMI 192
G WR R+ ++ + + + + V+ IQ + + K L+D
Sbjct: 98 -NGERWRALRRFSLATM-------RDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 193 HWLEGTVLDVVLRIIAGKRHN 213
+++ I+ GKR +
Sbjct: 150 LLFHSITSNIICSIVFGKRFD 170
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 62/141 (43%), Gaps = 9/141 (6%)
Query: 73 MADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFSVISFA 132
+ +KYG +FT+ LG + +V+ + +E +AF+ R K ++ + + VI FA
Sbjct: 39 LREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVI-FA 97
Query: 133 PYGNYWRQSRKIAIIELLSSHRLEKLKHVRESEVKASIQRLYKSCIXXXXXRKVVLVDMI 192
G WR R+ ++ + + + + V+ IQ + + K L+D
Sbjct: 98 -NGERWRALRRFSLATM-------RDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 193 HWLEGTVLDVVLRIIAGKRHN 213
+++ I+ GKR +
Sbjct: 150 LLFHSITSNIICSIVFGKRFD 170
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 62/141 (43%), Gaps = 9/141 (6%)
Query: 73 MADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFSVISFA 132
+ +KYG +FT+ LG + +V+ + +E +AF+ R K ++ + + VI FA
Sbjct: 39 LREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVI-FA 97
Query: 133 PYGNYWRQSRKIAIIELLSSHRLEKLKHVRESEVKASIQRLYKSCIXXXXXRKVVLVDMI 192
G WR R+ ++ + + + + V+ IQ + + K L+D
Sbjct: 98 -NGERWRALRRFSLATM-------RDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNT 149
Query: 193 HWLEGTVLDVVLRIIAGKRHN 213
+++ I+ GKR +
Sbjct: 150 LLFHSITSNIICSIVFGKRFD 170
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 41/85 (48%)
Query: 70 LGDMADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFSVI 129
L + K GP++ ++LG+++ +V+++ +E FA RP+ + +L+ I
Sbjct: 49 LLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDI 108
Query: 130 SFAPYGNYWRQSRKIAIIELLSSHR 154
S Y W+ +K+ LL R
Sbjct: 109 SLGDYSLLWKAHKKLTRSALLLGTR 133
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 68 RVLGDMADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFS 127
+ L +++ YGP+FT+ G+K +V+ +E KE + F+ R E F
Sbjct: 35 KSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFG 94
Query: 128 VISFAPYGNYWRQSRKIAIIELLSSHRLEKLKHVR-ESEVKASIQRLYKSCIXXXXXRKV 186
++ F+ G W++ R+ +++ L + ++ R + E + ++ L K+ K
Sbjct: 95 IV-FS-NGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKT--------KA 144
Query: 187 VLVDMIHWLEGTVLDVVLRIIAGKRHNSQSQEVNDWQRQITK 228
D L +V+ II KR + + Q+ + ++ +
Sbjct: 145 SPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNE 186
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 68 RVLGDMADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFS 127
+ L +++ YGP+FT+ G+K +V+ +E KE + F+ R E F
Sbjct: 33 KSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFG 92
Query: 128 VISFAPYGNYWRQSRKIAIIELLSSHRLEKLKHVR-ESEVKASIQRLYKSCIXXXXXRKV 186
++ F+ G W++ R+ +++ L + ++ R + E + ++ L K+ K
Sbjct: 93 IV-FS-NGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKT--------KA 142
Query: 187 VLVDMIHWLEGTVLDVVLRIIAGKRHNSQSQEVNDWQRQITK 228
D L +V+ II KR + + Q+ + ++ +
Sbjct: 143 SPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNE 184
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 77 YGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFSVISFAPYGN 136
YGP+FT+ G+ +V +E KE N + F+ R + + + +IS G
Sbjct: 43 YGPVFTVYFGMNPIVVFHGYEAVKEALIDNGEEFSGRGNSPISQRITKGLGIISSN--GK 100
Query: 137 YWRQSRKIAIIEL 149
W++ R+ ++ L
Sbjct: 101 RWKEIRRFSLTTL 113
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 76 KYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYN--FSVISFAP 133
++G +F+++L +V++ +E T+ + A RP ++LG+ + A
Sbjct: 42 RFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLAR 101
Query: 134 YGNYWRQSRKIAIIEL 149
YG WR+ R+ ++ L
Sbjct: 102 YGPAWREQRRFSVSTL 117
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 76 KYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYN--FSVISFAP 133
++G +F+++L +V++ +E T+ + A RP ++LG+ + A
Sbjct: 42 RFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLAR 101
Query: 134 YGNYWRQSRKIAIIEL 149
YG WR+ R+ ++ L
Sbjct: 102 YGPAWREQRRFSVSTL 117
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 73 MADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFSVISFA 132
++++YGP+FT+ LG ++ +V+ + +E + F+ R + + + + V+ F+
Sbjct: 39 ISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYGVV-FS 97
Query: 133 PYGNYWRQSRKIAIIELLSSHRLEKLKHVRESEVKASIQRLYKSCIXXXXXRKVVLVDMI 192
G +Q R+ +I L + V + ++ IQ I +D
Sbjct: 98 -NGERAKQLRRFSIATL-------RDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPT 149
Query: 193 HWLEGTVLDVVLRIIAGKRHNSQSQEVNDWQRQ---ITKFTAL-TGQ 235
+L TV +V+ I+ G R + + +E R I +FT+ TGQ
Sbjct: 150 FFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQ 196
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 73 MADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFSVISFA 132
++++YGP+FT+ LG ++ +V+ + +E + F+ R + + + + V+ F+
Sbjct: 39 ISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYGVV-FS 97
Query: 133 PYGNYWRQSRKIAIIELLSSHRLEKLKHVRESEVKASIQRLYKSCIXXXXXRKVVLVDMI 192
G +Q R+ +I L + V + ++ IQ I +D
Sbjct: 98 -NGERAKQLRRFSIATL-------RDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPT 149
Query: 193 HWLEGTVLDVVLRIIAGKRHNSQSQEVNDWQRQ---ITKFTAL-TGQ 235
+L TV +V+ I+ G R + + +E R I +FT+ TGQ
Sbjct: 150 FFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQ 196
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 73 MADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFSVISFA 132
++++YGP+FT+ LG ++ +V+ + +E + F+ R + + + + V+ F+
Sbjct: 39 ISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYGVV-FS 97
Query: 133 PYGNYWRQSRKIAIIELLSSHRLEKLKHVRESEVKASIQRLYKSCIXXXXXRKVVLVDMI 192
G +Q R+ +I L + V + ++ IQ I +D
Sbjct: 98 -NGERAKQLRRFSIATL-------RDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPT 149
Query: 193 HWLEGTVLDVVLRIIAGKRHNSQSQEVNDWQRQ---ITKFTAL-TGQ 235
+L TV +V+ I+ G R + + +E R I +FT+ TGQ
Sbjct: 150 FFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQ 196
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 73 MADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFSVISFA 132
++++YGP+FT+ LG ++ +V+ + +E + F+ R + + + + V+ F+
Sbjct: 39 ISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYGVV-FS 97
Query: 133 PYGNYWRQSRKIAIIELLSSHRLEKLKHVRESEVKASIQRLYKSCIXXXXXRKVVLVDMI 192
G +Q R+ +I L + V + ++ IQ I +D
Sbjct: 98 -NGERAKQLRRFSIATL-------RDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPT 149
Query: 193 HWLEGTVLDVVLRIIAGKRHNSQSQEVNDWQRQ---ITKFTAL-TGQ 235
+L TV +V+ I+ G R + + +E R I +FT+ TGQ
Sbjct: 150 FFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQ 196
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 73 MADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFSVISFA 132
++++YGP+FT+ LG ++ +V+ + +E + F+ R + + + + V+ F+
Sbjct: 39 ISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYGVV-FS 97
Query: 133 PYGNYWRQSRKIAIIELLSSHRLEKLKHVRESEVKASIQRLYKSCIXXXXXRKVVLVDMI 192
G +Q R+ +I L + V + ++ IQ I +D
Sbjct: 98 -NGERAKQLRRFSIATL-------RDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPT 149
Query: 193 HWLEGTVLDVVLRIIAGKRHNSQSQEVNDWQRQIT---KFTAL-TGQ 235
+L TV +V+ I+ G R + + +E R + +FT+ TGQ
Sbjct: 150 FFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGSFQFTSTSTGQ 196
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 73 MADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFSVISFA 132
+A +YG +F ++LG +V++ + AFA RP + ++ S ++F
Sbjct: 37 LARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRVVSGGRS-MAFG 95
Query: 133 PYGNYWRQSRKIA 145
Y +W+ R+ A
Sbjct: 96 HYSEHWKVQRRAA 108
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 31/76 (40%)
Query: 70 LGDMADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASRPKTMAMELLGYNFSVI 129
L M+ +YG + +++G LV+S + ++ F RP L+ S+
Sbjct: 41 LSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITDGQSLT 100
Query: 130 SFAPYGNYWRQSRKIA 145
G W R++A
Sbjct: 101 FSTDSGPVWAARRRLA 116
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 73 MADKYGPIFTMKLGVKQALVVSNWEIAKECFTTNDKAFASR 113
+A ++GP+FT+ +G ++ +V+ ++ KE F+ R
Sbjct: 39 LAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGR 79
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.132 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,756,432
Number of Sequences: 62578
Number of extensions: 185878
Number of successful extensions: 383
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 352
Number of HSP's gapped (non-prelim): 30
length of query: 252
length of database: 14,973,337
effective HSP length: 97
effective length of query: 155
effective length of database: 8,903,271
effective search space: 1380007005
effective search space used: 1380007005
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)