Query 037134
Match_columns 282
No_of_seqs 141 out of 1611
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 15:06:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037134.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037134hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lck_A Mitochondrial uncouplin 100.0 5.4E-49 1.8E-53 339.1 7.8 266 5-276 4-288 (303)
2 1okc_A ADP, ATP carrier protei 100.0 2.3E-47 8E-52 328.1 9.4 263 3-274 8-297 (297)
3 2lck_A Mitochondrial uncouplin 100.0 1.3E-33 4.5E-38 243.0 7.1 175 4-183 106-288 (303)
4 1okc_A ADP, ATP carrier protei 100.0 4.5E-32 1.6E-36 232.8 9.5 171 4-180 114-296 (297)
5 3tgu_G UQCRQ, mitochondrial ub 42.4 27 0.00091 22.8 3.4 36 241-276 33-68 (81)
6 1pp9_G Ubiquinol-cytochrome C 33.9 49 0.0017 21.5 3.6 37 240-276 32-68 (81)
7 3f2e_A SIRV coat protein; four 20.9 31 0.001 22.1 0.8 52 131-182 6-64 (100)
8 2acm_A Mucin-1; auto-catalytic 16.1 37 0.0013 20.5 0.3 20 134-153 40-59 (66)
9 2bnk_A Early protein GP16.7; D 14.0 1.3E+02 0.0044 18.0 2.3 48 110-157 19-66 (67)
10 1y9i_A Low temperature require 13.0 2.1E+02 0.007 21.6 3.8 47 66-112 111-159 (178)
No 1
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=100.00 E-value=5.4e-49 Score=339.11 Aligned_cols=266 Identities=18% Similarity=0.183 Sum_probs=216.1
Q ss_pred hhhhccccccccccccccchhhhhhhcccce-----------eeccc---hhhHhhhcchhhcccchHHHhhchHHHHHH
Q 037134 5 AVEEEESVSVSGQELDIQADIEWQMLDKWKF-----------FLCEI---GVSVARHEGFRALYRGFGTSLMGTIPARAV 70 (282)
Q Consensus 5 ~~~~~~~~~~~~~~i~~p~d~~k~~~q~~~~-----------~~~~~---~~~i~~~~G~~gly~G~~~~l~~~~~~~~~ 70 (282)
.+.+|..+++.+.++.+|+|++|+|+|.... ...+. .++|+++||++|||||+.+++++.++..++
T Consensus 4 ~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i 83 (303)
T 2lck_A 4 KFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASV 83 (303)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHH
Confidence 4678889999999999999999999996432 11222 779999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccC--CCCCcCcHHHHHHHHHHhhc
Q 037134 71 YIAALKVTKSKVGSFAVSDLGFTAAVASAVGGLSAAMVAQLVWTLVNVVTQRLMVANG--ADARYVNGVDMFRKIVRNDG 148 (282)
Q Consensus 71 ~f~~y~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~i~~P~~~ik~r~q~~~~--~~~~~~~~~~~~~~i~~~~G 148 (282)
+|.+||.+++.+.+..+. .+....+++|++||+++.++++|+|+||+|+|++.. ....|++.++++++|+++||
T Consensus 84 ~f~~ye~~k~~~~~~~~~----~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG 159 (303)
T 2lck_A 84 RIGLYDSVKQFYTKGSEH----AGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEG 159 (303)
T ss_dssp TTTHHHHHHHHHSCCCSS----CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCcC----CcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcC
Confidence 999999999988754222 567889999999999999999999999999999764 23578999999999999999
Q ss_pred cccccccchhhhhhhcccchhHHHHHHHHHHHHhcCCCCccccccCCccccccccCCCc---ceeeeeeeeccCCCCCCC
Q 037134 149 VRGLYRGFGISILTNAPSNAVWWPSYSVAQRLVWGGVGCFLRRKYGDREGDMMMIRPDS---KTVMAFQGVLDGDENGKR 225 (282)
Q Consensus 149 ~~~ly~G~~~~~lr~~~~~~~~~~~ye~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~q~~~q~~~~~~~ 225 (282)
+++||||+.++++|++|..+++|.+||.+|+.+.+......... ...+++.++..... .+..+++..+|.+. ...
T Consensus 160 ~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~~~~~~~-~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~-~~~ 237 (303)
T 2lck_A 160 IRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLP-CHFTSAFGAGFCTTVIASPVDVVKTRYMNSA-LGQ 237 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSCCSCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-SSS
T ss_pred hhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHhcc-ccc
Confidence 99999999999999999999999999999998875432211111 11112221111111 22223333355542 236
Q ss_pred CCCHHHHHHHHHHhhcHhHHhcchhHHHHHHhhhhhHHHHHHHHHhhhhcc
Q 037134 226 GPTVGQAVKSLVKEGGWMACYRGLGPRWASMSISATTMITTYEFLKRTSAK 276 (282)
Q Consensus 226 ~~~~~~~~~~i~~~eG~~~~yrG~~~~~~~~~~~~~i~~~~ye~~~~~~~~ 276 (282)
|.++++|+++|+++||++|||||+.|+++|.+|.++++|.+||.+|+.+.+
T Consensus 238 y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~ 288 (303)
T 2lck_A 238 YHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMA 288 (303)
T ss_dssp CCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred cCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998875
No 2
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=100.00 E-value=2.3e-47 Score=328.09 Aligned_cols=263 Identities=14% Similarity=0.150 Sum_probs=205.0
Q ss_pred chhhhhccccccccccccccchhhhhhhcccce--------eeccc---hhhHhhhcchhhcccchHHHhhchHHHHHHH
Q 037134 3 MRAVEEEESVSVSGQELDIQADIEWQMLDKWKF--------FLCEI---GVSVARHEGFRALYRGFGTSLMGTIPARAVY 71 (282)
Q Consensus 3 ~~~~~~~~~~~~~~~~i~~p~d~~k~~~q~~~~--------~~~~~---~~~i~~~~G~~gly~G~~~~l~~~~~~~~~~ 71 (282)
++.+.+|..+++.+..+.+|+|++|+|+|.... ...+. .++++++||++|||||+.+++++.++.++++
T Consensus 8 ~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~ 87 (297)
T 1okc_A 8 LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALN 87 (297)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHHHHHH
Confidence 356788999999999999999999999996532 11222 7799999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccccCCC-chhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCC---CCCcCcHHHHHHHHHHhh
Q 037134 72 IAALKVTKSKVGSFAVSDLG-FTAAVASAVGGLSAAMVAQLVWTLVNVVTQRLMVANGA---DARYVNGVDMFRKIVRND 147 (282)
Q Consensus 72 f~~y~~~~~~~~~~~~~~~~-~~~~~~~~~ag~~ag~~~~~i~~P~~~ik~r~q~~~~~---~~~~~~~~~~~~~i~~~~ 147 (282)
|.+||.+++.+....+.+.+ ..+....+++|++||+++.++++|+|+||+|+|++... ...|++.++++++|+++|
T Consensus 88 f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i~~~e 167 (297)
T 1okc_A 88 FAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSD 167 (297)
T ss_dssp HHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHHHHhc
Confidence 99999999964332221111 13457789999999999999999999999999997532 357899999999999999
Q ss_pred ccccccccchhhhhhhcccchhHHHHHHHHHHHHhcCCCCccccccCCc--------cccccccCCCcceeeeeeeeccC
Q 037134 148 GVRGLYRGFGISILTNAPSNAVWWPSYSVAQRLVWGGVGCFLRRKYGDR--------EGDMMMIRPDSKTVMAFQGVLDG 219 (282)
Q Consensus 148 G~~~ly~G~~~~~lr~~~~~~~~~~~ye~~k~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~q~~~q~ 219 (282)
|+++||||+.++++|++|.++++|.+||.+|+.+.+.... +..... ++.+++.|.++ ++..+|.
T Consensus 168 G~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~~~---~~~~~~~~g~~ag~~a~~~t~P~dv-----vktr~q~ 239 (297)
T 1okc_A 168 GLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNV---HIIVSWMIAQTVTAVAGLVSYPFDT-----VRRRMMM 239 (297)
T ss_dssp CHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGGCS---CHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHT
T ss_pred cHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccCCCc---cHHHHHHHHHHHHHHHHHhcChHHH-----HHHHHhh
Confidence 9999999999999999999999999999999976432211 111111 12222333333 2222343
Q ss_pred CC----CCCCCCCHHHHHHHHHHhhcHhHHhcchhHHHHHHhhhhhHHHHHHHHHhhhh
Q 037134 220 DE----NGKRGPTVGQAVKSLVKEGGWMACYRGLGPRWASMSISATTMITTYEFLKRTS 274 (282)
Q Consensus 220 ~~----~~~~~~~~~~~~~~i~~~eG~~~~yrG~~~~~~~~~~~~~i~~~~ye~~~~~~ 274 (282)
+. ....|.++++|+++|+++||++|||||+.|+++|. +.++++|.+||.+|+++
T Consensus 240 ~~~~~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~-~~~~~~f~~ye~~k~~l 297 (297)
T 1okc_A 240 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRG-MGGAFVLVLYDEIKKFV 297 (297)
T ss_dssp TTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHH-HHHHHHHHHHHTC----
T ss_pred cCCCCCCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHHhh-ccceeeehHHHHHHhhC
Confidence 21 12369999999999999999999999999999995 57889999999998764
No 3
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=99.98 E-value=1.3e-33 Score=243.00 Aligned_cols=175 Identities=16% Similarity=0.209 Sum_probs=153.7
Q ss_pred hhhhhccccccccccccccchhhhhhhcccce-----eeccc---hhhHhhhcchhhcccchHHHhhchHHHHHHHHHHH
Q 037134 4 RAVEEEESVSVSGQELDIQADIEWQMLDKWKF-----FLCEI---GVSVARHEGFRALYRGFGTSLMGTIPARAVYIAAL 75 (282)
Q Consensus 4 ~~~~~~~~~~~~~~~i~~p~d~~k~~~q~~~~-----~~~~~---~~~i~~~~G~~gly~G~~~~l~~~~~~~~~~f~~y 75 (282)
..+.+|..+++.+.++++|+|++|+|+|.... ...+. .++|+++||++|||||+.+++++.++..+++|.+|
T Consensus 106 ~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~y 185 (303)
T 2lck_A 106 SRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTY 185 (303)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHH
Confidence 34677888899999999999999999996432 11222 77999999999999999999999999999999999
Q ss_pred HHHHHhhccccccCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHhhcccccccc
Q 037134 76 KVTKSKVGSFAVSDLGFTAAVASAVGGLSAAMVAQLVWTLVNVVTQRLMVANGADARYVNGVDMFRKIVRNDGVRGLYRG 155 (282)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~i~~P~~~ik~r~q~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G 155 (282)
|.+++.+.+.... ..+....+++|++||++++++++|+|+||+|+|++.. ..|++.++++++|+++||++|||||
T Consensus 186 e~~k~~l~~~~~~---~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~--~~y~~~~~~~~~i~~~eG~~glyrG 260 (303)
T 2lck_A 186 DLIKDTLLKANLM---TDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL--GQYHSAGHCALTMLRKEGPRAFYKG 260 (303)
T ss_dssp HHHHHTTTTTTSC---CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS--SSCCSHHHHHHHHHHSSCTHHHHSC
T ss_pred HHHHHHHHhccCC---CCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccc--cccCCHHHHHHHHHHHcChHHhhcc
Confidence 9999988764322 1456778999999999999999999999999998754 4689999999999999999999999
Q ss_pred chhhhhhhcccchhHHHHHHHHHHHHhc
Q 037134 156 FGISILTNAPSNAVWWPSYSVAQRLVWG 183 (282)
Q Consensus 156 ~~~~~lr~~~~~~~~~~~ye~~k~~~~~ 183 (282)
+.|+++|.+|..+++|.+||.+|+.+.+
T Consensus 261 ~~~~~~r~~p~~~i~f~~ye~~k~~l~~ 288 (303)
T 2lck_A 261 FMPSFLRLGSWNVVMFVTYEQLKRALMA 288 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987654
No 4
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=99.97 E-value=4.5e-32 Score=232.79 Aligned_cols=171 Identities=21% Similarity=0.299 Sum_probs=145.6
Q ss_pred hhhhhccccccccccccccchhhhhhhcccce------eeccc---hhhHhhhcchhhcccchHHHhhchHHHHHHHHHH
Q 037134 4 RAVEEEESVSVSGQELDIQADIEWQMLDKWKF------FLCEI---GVSVARHEGFRALYRGFGTSLMGTIPARAVYIAA 74 (282)
Q Consensus 4 ~~~~~~~~~~~~~~~i~~p~d~~k~~~q~~~~------~~~~~---~~~i~~~~G~~gly~G~~~~l~~~~~~~~~~f~~ 74 (282)
..+.+|..+++.+.++.+|+|++|+|+|.... ...+. .++|+++||++|||||+.+++++.++.++++|.+
T Consensus 114 ~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ 193 (297)
T 1okc_A 114 GNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGV 193 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHHHHhccHHHhcCCchHHHHHHHHHHHHHHHH
Confidence 34677888999999999999999999996421 11222 7799999999999999999999999999999999
Q ss_pred HHHHHHhhccccccCCCchhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccCC---CCCcCcHHHHHHHHHHhhcccc
Q 037134 75 LKVTKSKVGSFAVSDLGFTAAVASAVGGLSAAMVAQLVWTLVNVVTQRLMVANGA---DARYVNGVDMFRKIVRNDGVRG 151 (282)
Q Consensus 75 y~~~~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~i~~P~~~ik~r~q~~~~~---~~~~~~~~~~~~~i~~~~G~~~ 151 (282)
||.+++.+.+... .+....+++|++||+++.++++|+|+||+|+|++... ...|++.++++++|+++||++|
T Consensus 194 ye~~k~~~~~~~~-----~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~g 268 (297)
T 1okc_A 194 YDTAKGMLPDPKN-----VHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKA 268 (297)
T ss_dssp HHHHHHSSCGGGC-----SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHhccCCC-----ccHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHcCcCe
Confidence 9999997754321 4467789999999999999999999999999987532 2468999999999999999999
Q ss_pred ccccchhhhhhhcccchhHHHHHHHHHHH
Q 037134 152 LYRGFGISILTNAPSNAVWWPSYSVAQRL 180 (282)
Q Consensus 152 ly~G~~~~~lr~~~~~~~~~~~ye~~k~~ 180 (282)
||||+.|+++|. +..++.|.+||.+|+.
T Consensus 269 lyrG~~~~~~r~-~~~~~~f~~ye~~k~~ 296 (297)
T 1okc_A 269 FFKGAWSNVLRG-MGGAFVLVLYDEIKKF 296 (297)
T ss_dssp GGTTHHHHHHHH-HHHHHHHHHHHTC---
T ss_pred EecchHHHHHhh-ccceeeehHHHHHHhh
Confidence 999999999996 5789999999998875
No 5
>3tgu_G UQCRQ, mitochondrial ubiquinol-cytochrome C reductase UB binding protein QP-C; cytochrome BC1, membrane protein, heme protein, rieske iron protein; HET: HEM WF3 UQ CDL PEE HEC BOG; 2.70A {Gallus gallus} PDB: 3cwb_G* 3h1i_G* 3h1h_G* 3h1k_G* 3h1l_G* 3h1j_G* 3l71_G* 3l72_G* 3l73_G* 3l74_G* 3l75_G* 3l70_G*
Probab=42.37 E-value=27 Score=22.79 Aligned_cols=36 Identities=6% Similarity=0.047 Sum_probs=26.7
Q ss_pred cHhHHhcchhHHHHHHhhhhhHHHHHHHHHhhhhcc
Q 037134 241 GWMACYRGLGPRWASMSISATTMITTYEFLKRTSAK 276 (282)
Q Consensus 241 G~~~~yrG~~~~~~~~~~~~~i~~~~ye~~~~~~~~ 276 (282)
|+...+|-+.-.++.++|..++.+.+|+..++....
T Consensus 33 ~i~N~~RR~~~q~l~v~pPfi~~Y~i~~Wa~~~ne~ 68 (81)
T 3tgu_G 33 ALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFER 68 (81)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHHH
Confidence 334444445677899999999999999888776543
No 6
>1pp9_G Ubiquinol-cytochrome C reductase complex ubiquino protein QP-C; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: f.23.13.1 PDB: 1bgy_G* 1be3_G* 1l0n_G* 1ntk_G* 1ntm_G* 1ntz_G* 1nu1_G* 1l0l_G* 1ppj_G* 1sqb_G* 1sqp_G* 1sqq_G* 1sqv_G* 1sqx_G* 2a06_G* 2fyu_G* 2ybb_G* 1bcc_G* 2bcc_G* 3bcc_G* ...
Probab=33.91 E-value=49 Score=21.52 Aligned_cols=37 Identities=11% Similarity=0.043 Sum_probs=30.6
Q ss_pred hcHhHHhcchhHHHHHHhhhhhHHHHHHHHHhhhhcc
Q 037134 240 GGWMACYRGLGPRWASMSISATTMITTYEFLKRTSAK 276 (282)
Q Consensus 240 eG~~~~yrG~~~~~~~~~~~~~i~~~~ye~~~~~~~~ 276 (282)
.|+...+|-+.-.++.++|..++++.+|+..++....
T Consensus 32 ~~i~n~~RR~~~~~l~v~pPfv~~Y~i~~Wa~~~~e~ 68 (81)
T 1pp9_G 32 KGIPNVLRRTRACILRVAPPFVAFYLVYTWGTQEFEK 68 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHhcceeeehhHHHHHHHHHHHHHHHHH
Confidence 5667777888889999999999999999888776643
No 7
>3f2e_A SIRV coat protein; four helix bundle, virus coat protein, viral protein; HET: CIT; 1.67A {Sulfolobus islandicus rudivirus 1 variorganism_taxid}
Probab=20.94 E-value=31 Score=22.09 Aligned_cols=52 Identities=10% Similarity=0.272 Sum_probs=30.8
Q ss_pred CCcCcHHHHHHHHHHhhccc----cccccchhhhhhhcc---cchhHHHHHHHHHHHHh
Q 037134 131 ARYVNGVDMFRKIVRNDGVR----GLYRGFGISILTNAP---SNAVWWPSYSVAQRLVW 182 (282)
Q Consensus 131 ~~~~~~~~~~~~i~~~~G~~----~ly~G~~~~~lr~~~---~~~~~~~~ye~~k~~~~ 182 (282)
+++.+..+-...++.+.|+. ..|+|+...+.|..- ..-..--+-.-+|.+..
T Consensus 6 pkftsvne~vsavltqygvtgpnraiyqgfglkvaralnr~g~gpalvnminglkayyi 64 (100)
T 3f2e_A 6 PKFTAVAEQVSAVLSQYGITGPNRAIYQGFGLKVARALNRLGGGPALVNMINGLKAYYI 64 (100)
T ss_dssp --CHHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHhcCCCccHHHHhhhhHHHHHHHHhcCCchHHHHHHhhhhHhhh
Confidence 56667777777788887764 578899887766542 22222334445555554
No 8
>2acm_A Mucin-1; auto-catalytic proteolysis, structural protein; NMR {Homo sapiens}
Probab=16.08 E-value=37 Score=20.55 Aligned_cols=20 Identities=30% Similarity=0.461 Sum_probs=16.3
Q ss_pred CcHHHHHHHHHHhhcccccc
Q 037134 134 VNGVDMFRKIVRNDGVRGLY 153 (282)
Q Consensus 134 ~~~~~~~~~i~~~~G~~~ly 153 (282)
+++.+.+.+|++++++.||+
T Consensus 40 r~is~L~lqIykq~~FLgl~ 59 (66)
T 2acm_A 40 RDISEMFLQIYKQGGFLGLS 59 (66)
T ss_dssp HHHHHHHHHHCTTTTEEEEE
T ss_pred HHHHHHHHHHHccCCeeeee
Confidence 45778888999999988875
No 9
>2bnk_A Early protein GP16.7; DNA-binding protein; 2.9A {Bacillus phage PHI29} SCOP: a.251.1.1 PDB: 2c5r_A 1zae_A
Probab=13.98 E-value=1.3e+02 Score=18.04 Aligned_cols=48 Identities=13% Similarity=0.160 Sum_probs=28.9
Q ss_pred HHHHhHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHhhccccccccch
Q 037134 110 QLVWTLVNVVTQRLMVANGADARYVNGVDMFRKIVRNDGVRGLYRGFG 157 (282)
Q Consensus 110 ~~i~~P~~~ik~r~q~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~ 157 (282)
+-|-.|+|+|--...-.-.......+....-|.-++-|.-+.+|+|..
T Consensus 19 SnIrIP~DIIEdl~~~~L~te~EVmnYiEnqR~~WKLEN~KKly~g~l 66 (67)
T 2bnk_A 19 SNIRIPSDIIEDLVNQRLQSEQEVLNYIETQRTYWKLENQKKLYRGSL 66 (67)
T ss_dssp TTCCCCHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHTTSCCCCSCC
T ss_pred cCCcCcHHHHHHHHHHhhhhHHHHHHHHHhhHhHHhhhhhHHHHhccc
Confidence 345678888866552221122333445566666777788889999863
No 10
>1y9i_A Low temperature requirement C protein; structural genomics, protein structure initiative, PSI; 1.80A {Listeria monocytogenes} SCOP: a.195.1.1
Probab=13.02 E-value=2.1e+02 Score=21.64 Aligned_cols=47 Identities=13% Similarity=0.129 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHhhcccccc--CCCchhHHHHHHHHHHHHHHHHHH
Q 037134 66 PARAVYIAALKVTKSKVGSFAVS--DLGFTAAVASAVGGLSAAMVAQLV 112 (282)
Q Consensus 66 ~~~~~~f~~y~~~~~~~~~~~~~--~~~~~~~~~~~~ag~~ag~~~~~i 112 (282)
...++.|..||..|-.....-+. ........-.++||+.|++++.++
T Consensus 111 ~~gf~~Fr~fDi~KPgpI~~ld~~~~gg~gimlDDivAgi~A~~~~~l~ 159 (178)
T 1y9i_A 111 SIGFTNYGYIDKVKPGILAKLNEHDGIAVHTFLDDIVGAIAAAAASRLA 159 (178)
T ss_dssp GGGHHHHHHHHHHCCTHHHHTTCCCSSCCCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccchhHHhhhcccCCCCcchHHHHHHHHHHHHHHHHH
Confidence 46677888888888654332211 123366788899999998765433
Done!