BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037135
(124 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04135|KNAP2_MALDO Homeobox protein knotted-1-like 2 OS=Malus domestica PE=2 SV=1
Length = 397
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 94/118 (79%), Positives = 106/118 (89%), Gaps = 5/118 (4%)
Query: 6 SSETEAIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDS 65
S+E EAIKAKII+HPQYS+LLEAY+DCQ+VGAP +VVARL+ ARQEFE+RQRSS SR+
Sbjct: 126 SNEVEAIKAKIIAHPQYSNLLEAYMDCQRVGAPSDVVARLSVARQEFEARQRSSGTSRE- 184
Query: 66 TNKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNG----PVRIF 119
T+KDPELDQFMEAYYDMLVKYREELTRPIQEAMDF+RRIETQLNML N P+RIF
Sbjct: 185 TSKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMLGNNNNAPPLRIF 242
>sp|Q41330|KN1_SOLLC Homeotic protein knotted-1 OS=Solanum lycopersicum GN=KN1 PE=2 SV=1
Length = 355
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 88/112 (78%), Positives = 101/112 (90%), Gaps = 1/112 (0%)
Query: 10 EAIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDSTNKD 69
EA+KAKII+HPQ S+LL+AY+DCQKVGAPPEV ARL+A RQEFE+RQR SL RD +KD
Sbjct: 92 EALKAKIIAHPQCSNLLDAYMDCQKVGAPPEVAARLSAVRQEFEARQRRSLTDRD-VSKD 150
Query: 70 PELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGPVRIFNS 121
PELDQFMEAYYDMLVKYREELTRP+QEAM+F+++IE QLNML N PVRIFNS
Sbjct: 151 PELDQFMEAYYDMLVKYREELTRPLQEAMEFMQKIEAQLNMLGNAPVRIFNS 202
>sp|O04134|KNAP1_MALDO Homeobox protein knotted-1-like 1 OS=Malus domestica PE=2 SV=1
Length = 398
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 107/121 (88%), Gaps = 5/121 (4%)
Query: 6 SSETEAIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDS 65
S+E EAIKAKII+HPQYS+L+EAY+DCQ+VGAP +VV RL+ ARQEFE+RQRSS SR+
Sbjct: 127 SNEVEAIKAKIIAHPQYSNLVEAYMDCQRVGAPSDVVPRLSVARQEFEARQRSSGTSRE- 185
Query: 66 TNKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNG----PVRIFNS 121
T+KDPELDQFMEAYYDMLVKYREELTRPIQEAMDF+RRIETQLNML N P+RIF+
Sbjct: 186 TSKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMLGNNNNAPPLRIFSP 245
Query: 122 T 122
+
Sbjct: 246 S 246
>sp|P46639|KNAT1_ARATH Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana GN=KNAT1
PE=1 SV=1
Length = 398
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 79/115 (68%), Positives = 100/115 (86%)
Query: 7 SETEAIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDST 66
S+ EA+KAKII+HP YS+LL+AY+DCQK+GAPP+VV R+ AARQ+FE+RQ+ S S ++
Sbjct: 129 SDVEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSAS 188
Query: 67 NKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGPVRIFNS 121
++DPELDQFMEAY DMLVKYREELTRPIQEAM+FIRRIE+QL+ML P+ I N+
Sbjct: 189 SRDPELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQSPIHILNN 243
>sp|Q43484|KNOX3_HORVU Homeobox protein KNOX3 OS=Hordeum vulgare GN=KNOX3 PE=1 SV=1
Length = 364
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 76/107 (71%), Positives = 90/107 (84%), Gaps = 1/107 (0%)
Query: 6 SSETEAIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDS 65
+++ EAIKAKIISHP YSSLL AY+DCQKVGAPPEV ARL A Q+ E RQR++L
Sbjct: 102 AADVEAIKAKIISHPHYSSLLAAYLDCQKVGAPPEVSARLTAVAQDLELRQRTALGGL-G 160
Query: 66 TNKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLS 112
T +PELDQFMEAY++MLVKYREELTRP+QEAM+F+RR+ETQLN LS
Sbjct: 161 TATEPELDQFMEAYHEMLVKYREELTRPLQEAMEFLRRVETQLNSLS 207
>sp|P46609|KNOS6_ORYSJ Homeobox protein knotted-1-like 6 OS=Oryza sativa subsp. japonica
GN=OSH1 PE=2 SV=2
Length = 361
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/105 (71%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
Query: 8 ETEAIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDSTN 67
+ EAIKAKIISHP YSSLL AY+DCQKVGAPPEV ARL A Q+ E RQR++L +
Sbjct: 100 DVEAIKAKIISHPHYSSLLAAYLDCQKVGAPPEVAARLTAVAQDLELRQRTALGVLGAAT 159
Query: 68 KDPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLS 112
+PELDQFMEAY++MLVKYREELTRP+QEAM+F+RR+ETQLN LS
Sbjct: 160 -EPELDQFMEAYHEMLVKYREELTRPLQEAMEFLRRVETQLNTLS 203
>sp|P24345|KN1_MAIZE Homeotic protein knotted-1 OS=Zea mays GN=KN-1 PE=2 SV=1
Length = 359
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 70/107 (65%), Positives = 87/107 (81%), Gaps = 1/107 (0%)
Query: 6 SSETEAIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDS 65
+ + EAIKAKIISHP Y SLL AY++C KVGAPPEV ARL QE E+RQR++L +
Sbjct: 98 AGDVEAIKAKIISHPHYYSLLTAYLECNKVGAPPEVSARLTEIAQEVEARQRTALGGLAA 157
Query: 66 TNKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLS 112
+PELDQFMEAY++MLVK+REELTRP+QEAM+F+RR+E+QLN LS
Sbjct: 158 AT-EPELDQFMEAYHEMLVKFREELTRPLQEAMEFMRRVESQLNSLS 203
>sp|O80416|KNOSC_ORYSJ Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica
GN=OSH15 PE=2 SV=1
Length = 355
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 84/106 (79%), Gaps = 5/106 (4%)
Query: 6 SSETEAIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDS 65
++E E+IKAKI++HPQYS+LL AY+DCQKVGAPPEV+ RL A + ++R ++RD
Sbjct: 85 AAEAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAKLDARPPGRHDARD- 143
Query: 66 TNKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNML 111
PELDQFMEAY +ML KYREELTRPI EAM+F++R+E+QL+ +
Sbjct: 144 ----PELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQLDTI 185
>sp|O65034|KNOSC_ORYSI Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica
GN=OSH15 PE=2 SV=2
Length = 355
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 84/106 (79%), Gaps = 5/106 (4%)
Query: 6 SSETEAIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDS 65
++E E+IKAKI++HPQYS+LL AY+DCQKVGAPPEV+ RL A + ++R ++RD
Sbjct: 85 AAEAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAKLDARPPGRHDARD- 143
Query: 66 TNKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNML 111
PELDQFMEAY +ML KYREELTRPI EAM+F++R+E+QL+ +
Sbjct: 144 ----PELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQLDTI 185
>sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica
GN=OSH10 PE=2 SV=1
Length = 337
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 76/105 (72%), Gaps = 2/105 (1%)
Query: 8 ETEAIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDSTN 67
ET+AIKAKI+SHP Y +LL A++DCQKVGAPPEVV RL+A E +SR S+
Sbjct: 58 ETDAIKAKIMSHPLYPALLRAFIDCQKVGAPPEVVGRLSALAGELDSRAEDRYLQGQSS- 116
Query: 68 KDPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLS 112
DPELD+FME Y DMLV YR+ELTRPIQEA F R +E Q++ +
Sbjct: 117 -DPELDEFMETYIDMLVSYRQELTRPIQEADQFFRNMEAQIDSFT 160
>sp|Q41853|RSH1_MAIZE Homeobox protein rough sheath 1 OS=Zea mays GN=RS1 PE=2 SV=1
Length = 351
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 71/95 (74%), Gaps = 5/95 (5%)
Query: 17 ISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDSTNKDPELDQFM 76
++HPQYS+LL AY+DCQKVGAPP+V+ RL A + ++ RD PELDQFM
Sbjct: 95 VAHPQYSALLAAYLDCQKVGAPPDVLERLTAMAAKLDASAAGRHEPRD-----PELDQFM 149
Query: 77 EAYYDMLVKYREELTRPIQEAMDFIRRIETQLNML 111
EAY +MLVKYREELTRPI EAM+F++R+E QL+ +
Sbjct: 150 EAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDCI 184
>sp|P46608|HSBH1_SOYBN Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1
Length = 379
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/103 (53%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
Query: 11 AIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDST-NKD 69
A+KAKI++HP Y LL AYV+CQKVGAPPEVVARL A + + S +D
Sbjct: 123 AVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAAAGSSCIGED 182
Query: 70 PELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLS 112
P LDQFMEAY +ML KY +EL++P++EAM F++RIE Q L+
Sbjct: 183 PALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKNLT 225
>sp|Q38874|STM_ARATH Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana GN=STM
PE=1 SV=2
Length = 382
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 12 IKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDSTNKDPE 71
+KAKI++HP Y LL AYV+CQKVGAPPEVVARL A + +S+ +DP
Sbjct: 121 VKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSS-AAAAAASMGPTGCLGEDPG 179
Query: 72 LDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQL 108
LDQFMEAY +MLVKY +EL++P +EAM F++R+E Q
Sbjct: 180 LDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQF 216
>sp|Q75LX9|KNOS5_ORYSJ Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp.
japonica GN=Os03g0673500 PE=3 SV=1
Length = 337
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
Query: 3 GNESSETEAIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNS 62
G +SSE IKAKI+SHP Y SLL A+VDC+KVGAPPEVV RL++ + Q S
Sbjct: 63 GLQSSEA-MIKAKIMSHPLYPSLLRAFVDCKKVGAPPEVVGRLSSLAVVTDVPQYSGDRC 121
Query: 63 RDSTN--KDPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLS 112
+ DPELDQFME Y ML +Y +EL RPIQEA +F R IE Q++ L+
Sbjct: 122 LPAQQPAADPELDQFMETYCYMLTRYGQELARPIQEAEEFFRGIEEQIDSLA 173
>sp|Q10ED2|KNOS8_ORYSJ Homeobox protein knotted-1-like 8 OS=Oryza sativa subsp. japonica
GN=OSH43 PE=2 SV=1
Length = 341
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 74/106 (69%), Gaps = 4/106 (3%)
Query: 11 AIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLA---AARQEFESRQRSSLNSRDSTN 67
A+KA+I+SHPQYS+LL AY+ C+KVGAPP+V+ +L AA+Q E+ +
Sbjct: 82 AVKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQLDEADGHPRRRHEPQRD 141
Query: 68 KDP-ELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLS 112
DP +LDQFM+AY ML +YREEL RPI EA +F R+ETQL+ L+
Sbjct: 142 DDPDQLDQFMDAYCSMLTRYREELERPILEAAEFFSRVETQLDSLA 187
>sp|Q9M6D9|STM_BRAOL Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea GN=STM
PE=2 SV=1
Length = 383
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 12 IKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDSTNKDPE 71
+KAKI++HP Y LL AYV+CQKVGAPPEV ARL + +S+ S +DP
Sbjct: 123 VKAKIMAHPHYHRLLLAYVNCQKVGAPPEVQARLEETCSS-AAAAAASMGPTGSLGEDPG 181
Query: 72 LDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQL 108
LDQFMEAY +MLVKY +EL++P +EAM F++ +E Q
Sbjct: 182 LDQFMEAYCEMLVKYEQELSKPFKEAMVFLQHVECQF 218
>sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana GN=KNAT6
PE=1 SV=1
Length = 327
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Query: 12 IKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDSTNKDPE 71
IKAKI HP Y LL+AY+DCQKVGAPPE+ L ++E + ++ + S DPE
Sbjct: 85 IKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRESDVYKQEVVPSS-CFGADPE 143
Query: 72 LDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNG 114
LD+FME Y D+LVKY+ +L RP EA F+ +IE QL L G
Sbjct: 144 LDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTG 186
>sp|P46640|KNAT2_ARATH Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana GN=KNAT2
PE=1 SV=3
Length = 310
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 11 AIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDSTNKDP 70
IK+KI SHP Y LL+ Y+DCQKVGAP E+ L ++E +R + DP
Sbjct: 68 VIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRD-VAPLSCFGADP 126
Query: 71 ELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGPV 116
ELD+FME Y D+LVKY+ +L RP EA FI +IE QL L GP
Sbjct: 127 ELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPA 172
>sp|Q9FP29|KNOS1_ORYSJ Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica
GN=OSH6 PE=2 SV=1
Length = 301
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 9 TEAIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDSTNK 68
TE +KA+I HP+Y +LL AY++C+KVGAPPEV + L +E + +
Sbjct: 40 TELMKAQIAGHPRYPTLLSAYIECRKVGAPPEVASLLKEIGRERRAGGGGGGAGQ--IGV 97
Query: 69 DPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNG 114
DPELD+FMEAY +LV+Y+EEL+RP EA F+ I+TQL+ L +G
Sbjct: 98 DPELDEFMEAYCRVLVRYKEELSRPFDEAASFLSSIQTQLSNLCSG 143
>sp|O22299|LET6_SOLLC Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum
GN=LET6 PE=2 SV=1
Length = 355
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 17 ISHPQYSSLLEAYVDCQKVGAPPEVVARL-AAARQEFESRQRSSLNSRDSTNKDPELDQF 75
++HP Y LL AY++CQK+GAPPEVVARL + SS + +DP LDQF
Sbjct: 101 MAHPHYHRLLTAYLNCQKIGAPPEVVARLEEICATSATMGRSSSSSGGGIIGEDPALDQF 160
Query: 76 MEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGP 115
MEAY +ML KY +EL++P +EAM F+ RIE Q L+ P
Sbjct: 161 MEAYCEMLTKYEQELSKPFKEAMVFLSRIECQFKALTLAP 200
>sp|Q7GDL5|KNOSA_ORYSJ Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica
GN=OSH71 PE=2 SV=1
Length = 311
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 9 TEAIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDSTNK 68
TE +KA+I HP Y SLL AY++C+KVGAPPEV L +E +
Sbjct: 52 TELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGRE-GRGGGGGATAGGEIGL 110
Query: 69 DPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNG 114
DPELD+FME Y +L +Y+EELTRP EA F+ I TQL L G
Sbjct: 111 DPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGG 156
>sp|A2Y007|KNOSA_ORYSI Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica
GN=OSH71 PE=2 SV=2
Length = 311
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 9 TEAIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDSTNK 68
TE +KA+I HP Y SLL AY++C+KVGAPPEV L +E +
Sbjct: 52 TELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGRE-GRGGGGGATAGGEIGL 110
Query: 69 DPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNG 114
DPELD+FME Y +L +Y+EELTRP EA F+ I TQL L G
Sbjct: 111 DPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGG 156
>sp|Q948L5|KNOS7_ORYSJ Homeobox protein knotted-1-like 7 OS=Oryza sativa subsp. japonica
GN=OSH3 PE=2 SV=1
Length = 365
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 77/106 (72%), Gaps = 2/106 (1%)
Query: 12 IKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNSRDSTN--KD 69
+KA+I+SHP+Y LL A++DC KVG P E +AAA + E+RQR++ + +D
Sbjct: 73 VKARIVSHPRYHRLLAAFLDCHKVGCPAEAAEEIAAAARVREARQRAAAAASRMPPAPED 132
Query: 70 PELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGP 115
PELDQFME Y +LV+ +EEL+RP+QEA +F+R +E++LN +++GP
Sbjct: 133 PELDQFMEDYCKLLVECKEELSRPLQEAEEFLRTVESELNSINSGP 178
>sp|Q10EC6|KNOS9_ORYSJ Homeobox protein knotted-1-like 9 OS=Oryza sativa subsp. japonica
GN=Os03g0772100 PE=2 SV=2
Length = 347
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 7/75 (9%)
Query: 11 AIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLA---AARQEFESRQRSSLNSRDSTN 67
A+KA+I+SHPQYS+LL AY+ C+KVGAPP+V+ +L AA+Q+ ++ +
Sbjct: 80 AMKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEPRR 139
Query: 68 K----DPELDQFMEA 78
D +LDQFM A
Sbjct: 140 DDDVPDHQLDQFMHA 154
>sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3
PE=1 SV=1
Length = 431
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 13 KAKIISHPQYSSLLEAYVDCQKVGAP----PEVVARLAAARQEFESRQRSSLNSRDSTNK 68
KA+I+SHP Y LL A+V C ++ P P + A+LA ++ ++
Sbjct: 160 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAAQGLVGD 219
Query: 69 DPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFIRRIETQLNMLS 112
D ELDQFM Y +L ++E+L + ++ EA+ IE L L+
Sbjct: 220 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 267
>sp|P48002|KNAT5_ARATH Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5
PE=1 SV=2
Length = 383
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 3 GNESSETEAIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQRSSLNS 62
G E + + KA I+ HP Y LL A+V C +V P + + R+ A + + + ++
Sbjct: 109 GGEDWRSASYKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVA-AKYST 167
Query: 63 RDSTNKDPELDQFMEAYYDMLVKYREELTRPI----QEAMDFIRRIETQLNMLSN 113
+ ELD FM Y +L ++E+L + EA+ IE L L+
Sbjct: 168 LGVVVDNKELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTG 222
>sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1
Length = 427
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 13 KAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAA--ARQEFESRQRSSLNSRDSTNKDP 70
KA+I++HP Y LL A+V C ++ P + + R+ A A+ + + S+L + D
Sbjct: 168 KAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGN-GMVGDDK 226
Query: 71 ELDQFMEAYYDMLVKYREELTRPIQ----EAMDFIRRIETQLNMLS 112
ELDQFM Y +L ++E+L + ++ EA+ IE L L+
Sbjct: 227 ELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 272
>sp|O22300|LET12_SOLLC Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum
GN=LET12 PE=2 SV=1
Length = 426
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 6 SSETEAIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAA--ARQEFESRQRSSLNSR 63
S E E KA I++HP Y LL A+V C ++ P + + R+ A A+ + + S L
Sbjct: 157 SWEREKCKADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSVLGQG 216
Query: 64 DSTNKDPELDQFMEAYYDMLVKYREELTRPIQ 95
D +LDQFM Y +L ++E+L + ++
Sbjct: 217 QPPLDDKDLDQFMTHYVLLLSSFKEQLQQHVR 248
>sp|P48001|KNAT4_ARATH Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4
PE=2 SV=3
Length = 393
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 13 KAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAA--ARQEFESRQRSSLNSRDS--TNK 68
KA+I+SHP Y LL A+V C ++ P + + R+ A A+ + + S+L +
Sbjct: 124 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAAQGLLAGD 183
Query: 69 DPELDQFMEAYYDMLVKYREELTRPIQ-EAMDFI 101
D ELD FM Y +L ++E+L + ++ AM+ +
Sbjct: 184 DKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAV 217
>sp|P46606|HD1_BRANA Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1
Length = 294
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 12 IKAKIISHPQYSSLLEAYVDCQKVGAP----PEVVARLAAARQEFESRQRSSLNSRDSTN 67
+K +I +HP Y LL A+V C +V P P + A+L+ + S +++ S +
Sbjct: 31 MKGEIATHPMYDQLLAAHVACLRVATPIDQLPIIEAQLSHSHHLLRSYASTAVGF--SHH 88
Query: 68 KDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFIRRIETQLNMLSNGPV 116
ELD F+ Y +L ++E+L + ++ EA+ R IE L+ L+ +
Sbjct: 89 DRQELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATL 141
>sp|Q9FPQ8|KNAT7_ARATH Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7
PE=2 SV=1
Length = 291
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 12 IKAKIISHPQYSSLLEAYVDCQKVGAP----PEVVARLAAARQEFESRQRSSLNSRDSTN 67
+K +I +HP Y LL A+V C +V P P + A+L+ + S +++ +
Sbjct: 29 LKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAVGYHHDRH 88
Query: 68 KDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFIRRIETQLNMLSNGPV 116
ELD F+ Y +L ++E+L + ++ EA+ R IE L+ L+ +
Sbjct: 89 ---ELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATL 138
>sp|Q0J6N4|KNOSD_ORYSJ Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica
GN=OSH45 PE=2 SV=2
Length = 374
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 12 IKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAA--ARQEFESRQRSSLNSRDSTNKD 69
KA+I++HP Y LL A+V C ++ P + + R+ A A+ + + S+L + + +
Sbjct: 108 CKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAAAGDDG 167
Query: 70 PELDQFMEAYYDMLVKYREELTRPIQ-EAMDFI 101
ELDQFM Y +L ++E+L + ++ AM+ +
Sbjct: 168 RELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAV 200
>sp|Q94LW3|KNOS3_ORYSJ Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica
GN=HOS66 PE=2 SV=1
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 12 IKAKIISHPQYSSLLEAYVDCQKVGAP----PEVVARLAAAR---QEFESRQRSSLNSRD 64
+K +I HP L+ A+V C +V P P + A+LA + + + R L+ D
Sbjct: 53 LKGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLSPHD 112
Query: 65 STNKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFIRRIETQLNMLSNGPV 116
ELD F+ Y +L +RE+L + ++ EA+ R IE L L+ +
Sbjct: 113 KQ----ELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATL 164
>sp|Q0E3C3|KNOS2_ORYSJ Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica
GN=HOS58 PE=2 SV=2
Length = 313
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 13 KAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAA--ARQEFESRQRSSLNSRDSTNKDP 70
KA + +HP Y LLEA+V C +V P + + R+ A A + S+ + +
Sbjct: 43 KAAVAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAASAAAAAGGPSGGE 102
Query: 71 ELDQFMEAYYDMLVKYREELTRPIQ-EAMDFI 101
ELD FM Y +L ++E+L + ++ AM+ +
Sbjct: 103 ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAV 134
>sp|Q94LW4|KNOSB_ORYSJ Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica
GN=HOS59 PE=2 SV=2
Length = 323
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 13 KAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAA------ARQEFESRQRSSLNSRDST 66
KA I +HP Y LLEA+V C +V P + + R+ A + ++ + +
Sbjct: 48 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAAAAGGAP 107
Query: 67 NKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFIRRIETQLNMLSNGPVR 117
+ ELD FM Y +L ++E+L + ++ EA+ +E L L+ R
Sbjct: 108 SGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPR 162
>sp|Q6MAS9|GLGA_PARUW Glycogen synthase OS=Protochlamydia amoebophila (strain UWE25)
GN=glgA PE=3 SV=1
Length = 500
Score = 32.3 bits (72), Expect = 0.78, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 45 LAAARQEFESRQRSSLNSRDSTNKDPELDQFMEAYYDMLVKYREELTRPIQEAMDFIRRI 104
L A E++ + + LN D + +PE+D+F+ A+Y + + + R + FI++I
Sbjct: 237 LEATLVEYQHKFKGILNGIDYSYWNPEIDRFLPAHYSLREMPKNKKDRNTVDKKGFIKKI 296
>sp|A0L4Y8|TRMD_MAGSM tRNA (guanine-N(1)-)-methyltransferase OS=Magnetococcus sp. (strain
MC-1) GN=trmD PE=3 SV=1
Length = 252
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 5 ESSETEAIKAKIISHPQYSSLLEAYVDCQKVGAPPEVVARLAAARQEFESRQ---RSSLN 61
ES++ ++ + ++ HP Y+ VD GAP +++ A E+ RQ R+ +
Sbjct: 161 ESAQADSFQTGLLDHPHYTRPAHWVVDGDHYGAPEVLLSGNHGAIAEWRRRQALLRTLIR 220
Query: 62 SRDSTNKDP 70
D K P
Sbjct: 221 RPDLLGKAP 229
>sp|P80877|METE_BACSU 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Bacillus subtilis (strain 168)
GN=metE PE=1 SV=4
Length = 762
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 20/109 (18%)
Query: 2 EGNESSETEAIKAKIISHPQYSSLL----EAYVDCQKVGAPPEVVAR---LAAARQEFES 54
+G E SE +AI+ +++ P Y LL E V ++ P V A + A++ FES
Sbjct: 168 KGYEPSEAKAIQKRLV--PLYVQLLKELEEEGVKWVQIDEPALVTASSEDVRGAKELFES 225
Query: 55 RQRSSLNSRDSTNKDPELDQFMEAYYDMLVKYREELTRPIQE-AMDFIR 102
S L+S L+ ++ Y+D + Y E ++ P+Q +DF+
Sbjct: 226 IT-SELSS---------LNVLLQTYFDSVDAYEELISYPVQGIGLDFVH 264
>sp|Q97AG7|SYI_THEVO Isoleucine--tRNA ligase OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=ileS
PE=3 SV=1
Length = 1028
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 18/106 (16%)
Query: 22 YSSLLEAYVDCQKVGAP--PEVVARLAAARQ-EFESRQRSSLNSRDSTNKDPELDQFMEA 78
YS+L A + C KV AP P V L + +ES S D++ D +L++ M+
Sbjct: 736 YSTLYTAIMTCSKVLAPIVPFVSDYLYLSLHGPYESIHLDSFPEPDTSKIDHDLEKRMDQ 795
Query: 79 YYDMLVKYREELTRPIQEAMDFIRRIETQLNMLSNGPVRIFNSTGN 124
Y ++ + +RRI ++N+ PV+ +GN
Sbjct: 796 AYSVI---------------ETVRRIRQEINIKGRQPVKEILLSGN 826
>sp|P0C6F6|R1A_BC512 Replicase polyprotein 1a OS=Bat coronavirus 512/2005 GN=1a PE=3 SV=1
Length = 4128
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 4 NESSETEAIKAKIISHPQY---SSLLEAYVDCQKVGAPPEVVARLA----AARQEFESRQ 56
N+SS +++ A ++ P Y + ++Y D G+PP++V +L A+ EF+ R+
Sbjct: 3667 NDSSVLQSVAATYVNLPSYLAYETARQSYEDALANGSPPQLVKQLRHAMNVAKSEFD-RE 3725
Query: 57 RSSLNSRDSTNKDPELDQFMEA 78
S+ D + + EA
Sbjct: 3726 ASTQRKLDRMAEQAASQMYKEA 3747
>sp|P0C6W0|R1AB_BC512 Replicase polyprotein 1ab OS=Bat coronavirus 512/2005 GN=rep PE=3
SV=1
Length = 6793
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 4 NESSETEAIKAKIISHPQY---SSLLEAYVDCQKVGAPPEVVARLA----AARQEFESRQ 56
N+SS +++ A ++ P Y + ++Y D G+PP++V +L A+ EF+ R+
Sbjct: 3667 NDSSVLQSVAATYVNLPSYLAYETARQSYEDALANGSPPQLVKQLRHAMNVAKSEFD-RE 3725
Query: 57 RSSLNSRDSTNKDPELDQFMEA 78
S+ D + + EA
Sbjct: 3726 ASTQRKLDRMAEQAASQMYKEA 3747
>sp|A8FCD2|METE_BACP2 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Bacillus pumilus (strain SAFR-032)
GN=metE PE=3 SV=1
Length = 762
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 2 EGNESSETEAIKAKIISHPQYSSLL----EAYVDCQKVGAPPEVVARLAAARQEFESRQR 57
+G E +E + I+ ++I P Y+ LL EA V ++ P V A + E Q
Sbjct: 168 KGYEPNEVKEIQQRLI--PLYTQLLKELEEAGVKWVQIDEPALVTASYEDVKAVKEIYQT 225
Query: 58 SSLNSRDSTNKDPELDQFMEAYYDMLVKYREELTRPIQE-AMDFIR 102
T P L+ ++ Y+D + Y E +T P++ +DF+
Sbjct: 226 I-------TEAVPALNILLQTYFDSVDAYEELVTYPVEAIGLDFVH 264
>sp|A4XUY1|ATE_PSEMY Putative arginyl-tRNA--protein transferase OS=Pseudomonas mendocina
(strain ymp) GN=ate PE=3 SV=1
Length = 235
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 32 CQKVGAPPEVVARLAAARQEFESRQRSSLNSRDSTNKDPELDQFMEAYYDMLVKYREE 89
CQ+ A + AR+ AA +QR L + + P F E YYD+ V+Y E+
Sbjct: 61 CQQCTA--CIPARIPAALFTPNRQQRRILKRNEDVSVHPVRPAFTEEYYDLYVRYIEQ 116
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.345
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,681,539
Number of Sequences: 539616
Number of extensions: 1445349
Number of successful extensions: 4483
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 4406
Number of HSP's gapped (non-prelim): 74
length of query: 124
length of database: 191,569,459
effective HSP length: 91
effective length of query: 33
effective length of database: 142,464,403
effective search space: 4701325299
effective search space used: 4701325299
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)