BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037139
(135 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P93008|RH21_ARATH DEAD-box ATP-dependent RNA helicase 21 OS=Arabidopsis thaliana
GN=RH21 PE=2 SV=1
Length = 733
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 116/132 (87%), Positives = 126/132 (95%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
GYRVTTLHGGKSQEQREISLEGFR KRYNVLVATDV GRGIDIPDVAHVINYDMP +IEM
Sbjct: 600 GYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEM 659
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTI 121
YTHRIGRTGRAGK+GVAT+FLT HDT+VFYDLKQML+QSNS VPPELA+HEAS+FKPGT+
Sbjct: 660 YTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLVQSNSAVPPELARHEASRFKPGTV 719
Query: 122 PDRPPRRNDTVF 133
PDRPPR +DTV+
Sbjct: 720 PDRPPRHSDTVY 731
>sp|Q53RK8|RH21_ORYSJ DEAD-box ATP-dependent RNA helicase 21 OS=Oryza sativa subsp.
japonica GN=Os03g0708600 PE=2 SV=1
Length = 736
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 109/133 (81%), Positives = 125/133 (93%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G+RVTTLHGGKSQEQRE SL+GFR +R+ VLVATDVAGRGIDIPDVAHVINY+MP +I+
Sbjct: 602 GFRVTTLHGGKSQEQRETSLDGFRNRRFTVLVATDVAGRGIDIPDVAHVINYEMPSSIDT 661
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTI 121
YTHRIGRTGRAGK G+AT+FLT +TD+F+DLKQMLIQSNSPVPPELA+HEASKFKPG++
Sbjct: 662 YTHRIGRTGRAGKKGLATSFLTLENTDIFFDLKQMLIQSNSPVPPELARHEASKFKPGSV 721
Query: 122 PDRPPRRNDTVFA 134
PDRPPRRNDTV+A
Sbjct: 722 PDRPPRRNDTVYA 734
>sp|Q9FZ92|RH44_ARATH Putative DEAD-box ATP-dependent RNA helicase 44 OS=Arabidopsis
thaliana GN=RH44 PE=5 SV=2
Length = 622
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 102/121 (84%)
Query: 4 RVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYT 63
RVTTLH GKSQEQR+ SLE F+ KR+NVLV TDV GRG+DI D+A VINYDMP +++YT
Sbjct: 498 RVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYT 557
Query: 64 HRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPD 123
HRIGRTGRAGKTGVATTFLT D DVFY LKQ L + NS VPPELA+HEASKFKPGT PD
Sbjct: 558 HRIGRTGRAGKTGVATTFLTLEDKDVFYGLKQKLNECNSLVPPELARHEASKFKPGTFPD 617
Query: 124 R 124
R
Sbjct: 618 R 618
>sp|Q1DMX8|PRP28_COCIM Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Coccidioides
immitis (strain RS) GN=PRP28 PE=3 SV=2
Length = 820
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/119 (63%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
Query: 1 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 60
+GY TLHG K+QEQRE +L R +VLVATD+AGRGID+PDV+ V+N++M NIE
Sbjct: 678 MGYSSVTLHGSKTQEQREAALASVRNGNTDVLVATDLAGRGIDVPDVSLVVNFNMATNIE 737
Query: 61 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 118
YTHRIGRTGRAGK+GVA TFL D DV YDLKQML++S+ S VP EL KHEA++ KP
Sbjct: 738 SYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLMKSSISRVPEELRKHEAAQSKP 796
>sp|Q9BUQ8|DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens GN=DDX23
PE=1 SV=3
Length = 820
Score = 155 bits (393), Expect = 5e-38, Method: Composition-based stats.
Identities = 81/135 (60%), Positives = 99/135 (73%), Gaps = 2/135 (1%)
Query: 1 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 60
+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NIE
Sbjct: 687 MGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIE 746
Query: 61 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPG 119
Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KPG
Sbjct: 747 DYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKPG 806
Query: 120 TIPDRPPRRNDTVFA 134
TI + RR +T+FA
Sbjct: 807 TILTK-KRREETIFA 820
>sp|Q5RC67|DDX23_PONAB Probable ATP-dependent RNA helicase DDX23 OS=Pongo abelii GN=DDX23
PE=2 SV=1
Length = 820
Score = 155 bits (392), Expect = 6e-38, Method: Composition-based stats.
Identities = 81/135 (60%), Positives = 99/135 (73%), Gaps = 2/135 (1%)
Query: 1 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 60
+GY TLHGGK QEQRE +L + ++LVATDVAGRGIDI DV+ V+NYDM NIE
Sbjct: 687 MGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIE 746
Query: 61 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPG 119
Y HRIGRTGRAGK+GVA TFLT D+ VFY+LKQ +++S S PPELA H ++ KPG
Sbjct: 747 DYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKPG 806
Query: 120 TIPDRPPRRNDTVFA 134
TI + RR +T+FA
Sbjct: 807 TILTK-KRREETIFA 820
>sp|Q2HEB0|PRP28_CHAGB Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Chaetomium
globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 /
NBRC 6347 / NRRL 1970) GN=PRP28 PE=3 SV=1
Length = 705
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/119 (61%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
Query: 1 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 60
GY TLHG K+QEQRE SL R + N+LVATD+AGRGID+ DV+ V+N++MP +IE
Sbjct: 565 WGYSTVTLHGSKTQEQREASLASVRNGQANILVATDLAGRGIDVADVSLVVNFNMPSSIE 624
Query: 61 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 118
YTHRIGRTGRAGK+GVA TFL D+DV YDLKQ++ +S+ S VP EL +HEA++ KP
Sbjct: 625 AYTHRIGRTGRAGKSGVAITFLGNEDSDVMYDLKQIISKSSISKVPEELRRHEAAQSKP 683
>sp|Q2UH00|PRP28_ASPOR Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=prp28 PE=3 SV=1
Length = 803
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/119 (62%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
Query: 1 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 60
G+ TLHG K+QEQRE +L R + +VLVATD+AGRGID+PDV+ VIN++M IE
Sbjct: 665 WGFSSVTLHGSKTQEQREAALASVRNGQTDVLVATDLAGRGIDVPDVSLVINFNMATTIE 724
Query: 61 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 118
YTHRIGRTGRAGK+GVA TFL DTDV YDLKQM+++S+ S +P EL KHEA++ KP
Sbjct: 725 SYTHRIGRTGRAGKSGVAITFLGNEDTDVMYDLKQMIMKSSISRLPEELRKHEAAQSKP 783
>sp|A1CX72|PRP28_NEOFI Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=prp28 PE=3 SV=1
Length = 796
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 74/119 (62%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
Query: 1 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 60
+G+ TLHG K+QEQRE +L R +VLVATD+AGRGID+PDV+ V+N++M +IE
Sbjct: 657 MGFSSVTLHGSKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMANSIE 716
Query: 61 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 118
YTHRIGRTGRAGK+GVA TFL D DV YDLKQML++S S VP EL KHEA++ KP
Sbjct: 717 SYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLMKSPISRVPEELRKHEAAQSKP 775
>sp|Q5BCU6|PRP28_EMENI Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=prp28 PE=3 SV=2
Length = 782
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/119 (63%), Positives = 90/119 (75%), Gaps = 1/119 (0%)
Query: 1 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 60
G+ TLHG K+QEQRE +L R +VLVATD+AGRGID+PDV+ VIN++M +IE
Sbjct: 644 WGFSSVTLHGSKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVINFNMATSIE 703
Query: 61 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 118
YTHRIGRTGRAGK+GVA TFL D DV YDLKQMLI+S S VP EL KHEA++ KP
Sbjct: 704 SYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLIKSPISRVPEELRKHEAAQSKP 762
>sp|Q4WPE9|PRP28_ASPFU Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=prp28 PE=3 SV=1
Length = 796
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/119 (62%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
Query: 1 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 60
+G+ TLHG K+QEQRE +L R +VLVATD+AGRGID+PDV+ V+N++M +IE
Sbjct: 657 MGFSSVTLHGSKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMANSIE 716
Query: 61 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 118
YTHRIGRTGRAGK+GVA TFL D DV YDLKQML++S S VP EL KHEA++ KP
Sbjct: 717 SYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLMKSPISRVPEELRKHEAAQSKP 775
>sp|Q0CLX0|PRP28_ASPTN Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=prp28 PE=3
SV=1
Length = 783
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/119 (63%), Positives = 90/119 (75%), Gaps = 1/119 (0%)
Query: 1 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 60
G+ TLHG K+QEQRE +L R +VLVATD+AGRGID+PDV+ V+N++M +IE
Sbjct: 645 WGFSSVTLHGSKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATSIE 704
Query: 61 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 118
YTHRIGRTGRAGK+GVA TFL D DV YDLKQMLI+S S VP EL KHEA++ KP
Sbjct: 705 SYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLIKSPISRVPDELRKHEAAQQKP 763
>sp|A1CHL3|PRP28_ASPCL Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=prp28 PE=3 SV=1
Length = 798
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/119 (61%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
Query: 1 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 60
+G+ TLHG K+Q+QRE +L R +VLVATD+AGRGID+PDV+ V+N++M +IE
Sbjct: 659 MGFSSVTLHGSKTQDQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATSIE 718
Query: 61 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 118
YTHRIGRTGRAGK+GVA TFL D DV YDLKQML++S S VP EL KHEA++ KP
Sbjct: 719 SYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLMKSPISRVPEELRKHEAAQSKP 777
>sp|Q7SEL0|PRP28_NEUCR Pre-mRNA-splicing ATP-dependent RNA helicase prp-28 OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=prp-28 PE=3 SV=1
Length = 728
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
Query: 1 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 60
+GY TLHG K+QEQRE +L R + ++LVATD+AGRGID+PDV+ V+N++M NIE
Sbjct: 589 MGYSAVTLHGSKTQEQREAALASLRNGQTDILVATDLAGRGIDVPDVSLVVNFNMATNIE 648
Query: 61 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 118
YTHRIGRTGRAGK+GVA TFL D DV YDL+Q++ +S+ S VP EL +HEA++ KP
Sbjct: 649 SYTHRIGRTGRAGKSGVAITFLGPEDNDVLYDLRQIISKSSISKVPDELRRHEAAQNKP 707
>sp|A2QIL2|PRP28_ASPNC Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=prp28 PE=3
SV=1
Length = 810
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/119 (61%), Positives = 90/119 (75%), Gaps = 1/119 (0%)
Query: 1 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 60
G+ TLHG K+Q+QRE +L R +VLVATD+AGRGID+PDV+ V+N++M +IE
Sbjct: 671 WGFSSVTLHGSKTQDQREAALASVRNGTTDVLVATDLAGRGIDVPDVSLVVNFNMATSIE 730
Query: 61 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 118
YTHRIGRTGRAGK+GVA TFL D DV YDLKQML++S S VP EL KHEA++ KP
Sbjct: 731 SYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLMKSPISRVPEELRKHEAAQSKP 789
>sp|Q0UWC8|PRP28_PHANO Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Phaeosphaeria
nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)
GN=PRP28 PE=3 SV=1
Length = 746
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 89/120 (74%), Gaps = 1/120 (0%)
Query: 1 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 60
+G+ TLHG K+QEQRE +L R R +VLVATD+AGRGIDI DV+ V+N++M +IE
Sbjct: 618 MGFSSVTLHGSKTQEQREAALAQLREHRVDVLVATDLAGRGIDITDVSLVVNFNMATSIE 677
Query: 61 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKPG 119
YTHRIGRTGRAGK+GVA TF D DV YDLKQML +S S VP +L KHEA++ K G
Sbjct: 678 SYTHRIGRTGRAGKSGVAITFWGNEDADVLYDLKQMLTKSQISKVPEDLRKHEAAQQKGG 737
>sp|A7EGG4|PRP28_SCLS1 Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=prp28
PE=3 SV=1
Length = 816
Score = 146 bits (368), Expect = 4e-35, Method: Composition-based stats.
Identities = 74/118 (62%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
Query: 1 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 60
+G+ TLHG K+QEQRE +L R+ NVLVATD+AGRGID+PDV+ V+N++M NIE
Sbjct: 675 MGFTSVTLHGSKTQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNMATNIE 734
Query: 61 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 117
YTHRIGRTGRAGK+GVA TFL D D YDLKQML++S+ S VP EL KHEA++ K
Sbjct: 735 SYTHRIGRTGRAGKSGVAITFLGNEDADTMYDLKQMLMKSSISRVPEELRKHEAAQQK 792
>sp|Q4I7F9|PRP28_GIBZE Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Gibberella
zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL
31084) GN=PRP28 PE=3 SV=1
Length = 721
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/119 (59%), Positives = 89/119 (74%), Gaps = 1/119 (0%)
Query: 1 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 60
+G+ TLHG K+QEQRE +L R VLVATD+AGRGID+PDV+ V+N++M NIE
Sbjct: 584 MGWSAVTLHGSKTQEQREAALGSVRAGHTQVLVATDLAGRGIDVPDVSLVVNFNMATNIE 643
Query: 61 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 118
YTHRIGRTGRAGK+GVA TFL D + YDLKQ+L +S+ S VP EL +HEA++ KP
Sbjct: 644 SYTHRIGRTGRAGKSGVAITFLGPEDHETMYDLKQILSKSSISKVPEELRRHEAAQSKP 702
>sp|Q54Y81|DDX23_DICDI ATP-dependent RNA helicase ddx23 OS=Dictyostelium discoideum
GN=helB2 PE=2 SV=1
Length = 834
Score = 142 bits (359), Expect = 4e-34, Method: Composition-based stats.
Identities = 68/118 (57%), Positives = 89/118 (75%)
Query: 6 TTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHR 65
T LH G+SQEQRE +LEGF+ ++Y VL+AT VA RGI + V HVIN+D+P NIE YTHR
Sbjct: 709 TILHSGRSQEQREAALEGFKKRKYEVLIATGVASRGIHVDGVTHVINFDIPKNIEDYTHR 768
Query: 66 IGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPD 123
IGRTGRAG G+A++F+T D ++ YDLKQ+L +N+ VP EL KH +S+ K G+ D
Sbjct: 769 IGRTGRAGSAGLASSFITDKDVEIMYDLKQILTSTNNIVPIELLKHPSSQQKHGSSKD 826
>sp|Q9Y7T7|PRP28_SCHPO Pre-mRNA-splicing ATP-dependent RNA helicase prp28
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp28 PE=3 SV=1
Length = 662
Score = 139 bits (350), Expect = 5e-33, Method: Composition-based stats.
Identities = 69/122 (56%), Positives = 90/122 (73%), Gaps = 1/122 (0%)
Query: 1 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 60
+G+ TLHG KSQEQRE ++E R K ++LVATD+AGRGIDIP+V+ V+NY+M +IE
Sbjct: 539 IGWHAVTLHGSKSQEQRERAIEQLRNKTADILVATDIAGRGIDIPNVSLVLNYNMAKSIE 598
Query: 61 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQS-NSPVPPELAKHEASKFKPG 119
YTHRIGRTGRAGK+G A TFL DTDV+YDL+ +L +S + +P EL HEA+ +
Sbjct: 599 DYTHRIGRTGRAGKSGTAITFLGPEDTDVYYDLRVLLSRSAKAHIPDELRNHEAAFVRHA 658
Query: 120 TI 121
I
Sbjct: 659 AI 660
>sp|A6RJA2|PRP28_BOTFB Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Botryotinia
fuckeliana (strain B05.10) GN=prp28 PE=3 SV=1
Length = 783
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 79/101 (78%)
Query: 1 LGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIE 60
+G+ TLHG K+QEQRE +L R+ NVLVATD+AGRGID+PDV+ V+N++M NIE
Sbjct: 676 MGFTSVTLHGSKTQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNMATNIE 735
Query: 61 MYTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN 101
YTHRIGRTGRAGK+GVA TFL D+D YDLKQML +S+
Sbjct: 736 SYTHRIGRTGRAGKSGVAITFLGNEDSDTMYDLKQMLTKSS 776
>sp|A4RK80|PRP28_MAGO7 Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Magnaporthe
oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)
GN=PRP28 PE=3 SV=1
Length = 674
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/118 (57%), Positives = 84/118 (71%), Gaps = 1/118 (0%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
+ TLHG K+Q+QRE +L+ FR R NVLVATDVA RG+DIPDV+ VIN++M G IE+
Sbjct: 555 SFSAVTLHGNKTQDQREAALQSFRDGRTNVLVATDVAARGLDIPDVSLVINFNMAGTIEV 614
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFKP 118
YTHRIGRTGRAGK G+A TF D V Y LKQ++ +S S VPP L H ++ KP
Sbjct: 615 YTHRIGRTGRAGKEGMAITFCGPEDHGVLYHLKQIMSKSQMSKVPPWLKDHPEAQSKP 672
>sp|P0CQ88|PRP28_CRYNJ Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=PRP28 PE=3 SV=1
Length = 738
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 84/115 (73%), Gaps = 1/115 (0%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G TLH GKSQEQRE +L+ R +VLVATD+AGRGID+PDV+ VIN+ M IE
Sbjct: 608 GMSGVTLHSGKSQEQREAALQALRDGEISVLVATDLAGRGIDVPDVSLVINWQMSDTIEK 667
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASK 115
Y HRIGRTGRAGKTGVA TFLT D +V YDL+ + +S S + PELA+HEA++
Sbjct: 668 YVHRIGRTGRAGKTGVAITFLTNDDDEVMYDLRIEVEKSKMSKMNPELARHEAAR 722
>sp|P0CQ89|PRP28_CRYNB Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=PRP28 PE=3 SV=1
Length = 738
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 84/115 (73%), Gaps = 1/115 (0%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G TLH GKSQEQRE +L+ R +VLVATD+AGRGID+PDV+ VIN+ M IE
Sbjct: 608 GMSGVTLHSGKSQEQREAALQALRDGEISVLVATDLAGRGIDVPDVSLVINWQMSDTIEK 667
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASK 115
Y HRIGRTGRAGKTGVA TFLT D +V YDL+ + +S S + PELA+HEA++
Sbjct: 668 YVHRIGRTGRAGKTGVAITFLTNDDDEVMYDLRIEVEKSKMSKMNPELARHEAAR 722
>sp|Q6C024|PRP28_YARLI Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=PRP28 PE=3 SV=1
Length = 575
Score = 132 bits (333), Expect = 4e-31, Method: Composition-based stats.
Identities = 65/117 (55%), Positives = 85/117 (72%), Gaps = 1/117 (0%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G+R +HGGK QEQRE +++ + +VLVATDVAGRG+DIP+V+ V+N+ M NIE
Sbjct: 455 GWRTAIIHGGKQQEQREQAVQHLKRGAVDVLVATDVAGRGLDIPNVSLVVNFQMANNIES 514
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSN-SPVPPELAKHEASKFK 117
YTHRIGRTGRAGK G A TFL D DV ++LKQM+ +S SP EL++H A++ K
Sbjct: 515 YTHRIGRTGRAGKRGTAVTFLGQEDDDVLFELKQMISRSEASPNNQELSRHPAARMK 571
>sp|Q5Z6G5|RH35B_ORYSJ DEAD-box ATP-dependent RNA helicase 35B OS=Oryza sativa subsp.
japonica GN=Os06g0697200 PE=3 SV=1
Length = 619
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 77/109 (70%), Gaps = 1/109 (0%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G +HGGK E+R+ + + F+ +VLVATDVA +G+DIPD+ HVINYDMP IE
Sbjct: 448 GVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAEIEN 507
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTD-VFYDLKQMLIQSNSPVPPELA 109
Y HRIGRTGR GKTGVATTF+ + T+ DLKQ+LI+S +PP LA
Sbjct: 508 YVHRIGRTGRRGKTGVATTFINKNQTETTLLDLKQLLIESKQRLPPILA 556
>sp|Q0E3X4|RH35A_ORYSJ DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa subsp.
japonica GN=Os02g0150100 PE=2 SV=2
Length = 627
Score = 126 bits (317), Expect = 3e-29, Method: Composition-based stats.
Identities = 59/110 (53%), Positives = 78/110 (70%), Gaps = 1/110 (0%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G +HGGK QE+RE ++E F+ + +VLVATDVA +G+D PD+ HVINYDMP IE
Sbjct: 457 GVEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIEN 516
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTD-VFYDLKQMLIQSNSPVPPELAK 110
Y HRIGRTGR GKTG+ATTF+ + T+ DLK +L ++ +PP LA+
Sbjct: 517 YVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLLKEAKQRIPPVLAE 566
>sp|Q9SZB4|RH43_ARATH Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis
thaliana GN=RH43 PE=3 SV=1
Length = 542
Score = 126 bits (316), Expect = 5e-29, Method: Composition-based stats.
Identities = 57/110 (51%), Positives = 78/110 (70%), Gaps = 1/110 (0%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G +HGGK QE R+ ++ F+ + +VLVATDVA +G+D PD+ HVINYDMPG IE
Sbjct: 372 GVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIEN 431
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDV-FYDLKQMLIQSNSPVPPELAK 110
Y HRIGRTGR GKTG+ATTF+ + +++ DLK +L ++ +PP LA+
Sbjct: 432 YVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAE 481
>sp|Q9LU46|RH35_ARATH DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana
GN=RH35 PE=2 SV=1
Length = 591
Score = 125 bits (315), Expect = 6e-29, Method: Composition-based stats.
Identities = 57/110 (51%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G +HGGK QE RE ++ F+ + +VLVATDVA +G+D PD+ HVINYDMP IE
Sbjct: 421 GVEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIEN 480
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTD-VFYDLKQMLIQSNSPVPPELAK 110
Y HRIGRTGR GKTG+ATTF+ + ++ DLK +L ++ +PP LA+
Sbjct: 481 YVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAE 530
>sp|Q91VN6|DDX41_MOUSE Probable ATP-dependent RNA helicase DDX41 OS=Mus musculus GN=Ddx41
PE=1 SV=2
Length = 622
Score = 122 bits (306), Expect = 6e-28, Method: Composition-based stats.
Identities = 58/108 (53%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP IE
Sbjct: 456 GVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIEN 515
Query: 62 YTHRIGRTGRAGKTGVATTFLTFH-DTDVFYDLKQMLIQSNSPVPPEL 108
Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 516 YVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>sp|Q9UJV9|DDX41_HUMAN Probable ATP-dependent RNA helicase DDX41 OS=Homo sapiens GN=DDX41
PE=1 SV=2
Length = 622
Score = 122 bits (306), Expect = 6e-28, Method: Composition-based stats.
Identities = 58/108 (53%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G +HGGK QE+R ++E FR + +VLVATDVA +G+D P + HVINYDMP IE
Sbjct: 456 GVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIEN 515
Query: 62 YTHRIGRTGRAGKTGVATTFLTFH-DTDVFYDLKQMLIQSNSPVPPEL 108
Y HRIGRTGR+G TG+ATTF+ D V DLK +L+++ VPP L
Sbjct: 516 YVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVL 563
>sp|Q9M2F9|RH52_ARATH DEAD-box ATP-dependent RNA helicase 52 OS=Arabidopsis thaliana
GN=RH52 PE=2 SV=1
Length = 646
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 82/112 (73%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G+ TT+HG +SQ++RE++L F+T R +LVATDVA RG+DIP VAHV+N+D+P +I+
Sbjct: 429 GFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 488
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEA 113
Y HRIGRTGRAG +G+AT F ++T + L +++ ++N VP L ++ +
Sbjct: 489 YVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVPDWLTRYAS 540
>sp|Q84W89|RH37_ARATH DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana
GN=RH37 PE=2 SV=2
Length = 633
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 83/112 (74%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G+ T++HG ++Q++RE++L+ F++ R +LVATDVA RG+DIP VAHV+N+D+P +I+
Sbjct: 442 GFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 501
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEA 113
Y HRIGRTGRAGK+G+AT F +T + L +++ ++N VP L ++ +
Sbjct: 502 YVHRIGRTGRAGKSGLATAFFNDGNTSLARPLAELMQEANQEVPEWLTRYAS 553
>sp|Q8LA13|RH11_ARATH DEAD-box ATP-dependent RNA helicase 11 OS=Arabidopsis thaliana
GN=RH11 PE=2 SV=1
Length = 612
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 80/109 (73%)
Query: 3 YRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMY 62
+ T++HG ++Q++RE++L F+T R +LVATDVA RG+DIP VAHV+N+D+P +I+ Y
Sbjct: 433 FPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDY 492
Query: 63 THRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKH 111
HRIGRTGRAGK+G+AT F ++ + L +++ ++N VP L ++
Sbjct: 493 VHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPEWLTRY 541
>sp|Q8TFK8|DED1_CANGA ATP-dependent RNA helicase DED1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DED1 PE=3 SV=1
Length = 617
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 75/106 (70%)
Query: 3 YRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMY 62
+ T +HG +SQ +RE +L FR+ R N+LVAT VA RG+DIP+V HVINYD+P +++ Y
Sbjct: 427 FSATAIHGDRSQAERERALAAFRSGRANILVATAVAARGLDIPNVTHVINYDLPSDVDDY 486
Query: 63 THRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 108
HRIGRTGRAG TGVAT F + ++ L ++L ++N +PP L
Sbjct: 487 VHRIGRTGRAGNTGVATAFFNRDNNNIVKGLYEILEEANQEIPPFL 532
>sp|Q2R1M8|RH52C_ORYSJ DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa subsp.
japonica GN=Os11g0599500 PE=3 SV=1
Length = 623
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 82/112 (73%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G+ T++HG ++Q++RE +L F++ +LVATDVA RG+DIP VAHV+N+D+P +I+
Sbjct: 440 GFPATSIHGDRNQQEREYALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 499
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEA 113
Y HRIGRTGRAGK+G+AT F +++ + L +++ +SN VP L+++ A
Sbjct: 500 YVHRIGRTGRAGKSGLATAFFNENNSSMARSLAELMQESNQEVPAWLSRYAA 551
>sp|Q6CLR3|DED1_KLULA ATP-dependent RNA helicase DED1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DED1 PE=3 SV=1
Length = 627
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 76/107 (71%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G++ T +HG ++Q +RE +L F+T R +LVAT VA RG+DIP+V HVIN+D+P +I+
Sbjct: 440 GFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDIDD 499
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 108
Y HRIGRTGRAG TGVATTF + +V +L +L ++N VP L
Sbjct: 500 YVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFL 546
>sp|A5DL80|DBP2_PICGU ATP-dependent RNA helicase DBP2 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DBP2 PE=3 SV=3
Length = 554
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 78/115 (67%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G+ +HG K Q +R+ L F+T + ++VATDVA RGID+ +++VINYDMPGNIE
Sbjct: 396 GWPALAIHGDKQQNERDWVLREFKTGKSPIMVATDVAARGIDVKGISYVINYDMPGNIED 455
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKF 116
Y HRIGRTGRAG TG A + T ++ + DL +++ ++N VPPEL +++ F
Sbjct: 456 YVHRIGRTGRAGTTGTAVSLFTEANSKLGGDLCKIMREANQTVPPELLRYDRRSF 510
>sp|Q6Z4K6|RH52B_ORYSJ DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp.
japonica GN=PL10B PE=2 SV=1
Length = 638
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 80/112 (71%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G+ T++HG ++Q++RE +L F++ +LVATDVA RG+DIP VAHVIN+D+P +I+
Sbjct: 452 GFPATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDD 511
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEA 113
Y HRIGRTGRAGK+G+AT F +T + L +++ ++N VP L ++ A
Sbjct: 512 YVHRIGRTGRAGKSGLATAFFNESNTPLARPLSELMQEANQEVPQWLERYAA 563
>sp|Q59LU0|DBP2_CANAL ATP-dependent RNA helicase DBP2 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP2 PE=3 SV=2
Length = 562
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 77/115 (66%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G+ +HG K Q +R+ L+ FR + +++VATDVA RGID+ + HVINYDMPGNIE
Sbjct: 398 GWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGIDVKGITHVINYDMPGNIED 457
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKF 116
Y HRIGRTGR G +G A +F T ++ + DL +++ ++N VPPEL + + +
Sbjct: 458 YVHRIGRTGRGGASGTAISFFTEGNSKLGGDLCKIMREANQTVPPELQRFDRRSY 512
>sp|Q6BY27|DBP2_DEBHA ATP-dependent RNA helicase DBP2 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP2 PE=3 SV=1
Length = 536
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 79/115 (68%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G+ +HG K Q +R+ L+ F+T + ++VATDVA RGID+ +++VIN DMPGNIE
Sbjct: 376 GWPALAIHGDKQQGERDWVLKEFKTGKSPIMVATDVAARGIDVKGISYVINLDMPGNIED 435
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKF 116
Y HRIGRTGRAG TG A +F T +++ + DL +++ ++N +PPEL + + F
Sbjct: 436 YVHRIGRTGRAGSTGTAVSFFTDNNSKLGGDLCKIMREANQTIPPELMRFDRRSF 490
>sp|Q75B50|DED1_ASHGO ATP-dependent RNA helicase DED1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DED1
PE=3 SV=2
Length = 623
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 75/106 (70%)
Query: 5 VTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTH 64
T +HG ++Q +RE +L FRT R NVLVAT VA RG+DIP+V HVINYD+P +I+ Y H
Sbjct: 429 ATAIHGDRTQAERERALAFFRTGRANVLVATAVAARGLDIPNVTHVINYDLPSDIDDYVH 488
Query: 65 RIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 110
RIGRTGRAG TG+AT F + +V +L +L ++N VP L++
Sbjct: 489 RIGRTGRAGNTGLATAFFNRGNKNVVKELVDILEEANQEVPSFLSQ 534
>sp|P24783|DBP2_YEAST ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DBP2 PE=1 SV=1
Length = 546
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 74/111 (66%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G+ +HG K Q +R+ L+ FR R ++VATDVA RGID+ + +VINYDMPGNIE
Sbjct: 384 GWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIED 443
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHE 112
Y HRIGRTGRAG TG A +F T + + L ++ ++N +PPEL K++
Sbjct: 444 YVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIPPELLKYD 494
>sp|A6ZRX0|DBP2_YEAS7 ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP2 PE=3 SV=1
Length = 546
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 74/111 (66%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G+ +HG K Q +R+ L+ FR R ++VATDVA RGID+ + +VINYDMPGNIE
Sbjct: 384 GWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIED 443
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHE 112
Y HRIGRTGRAG TG A +F T + + L ++ ++N +PPEL K++
Sbjct: 444 YVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIPPELLKYD 494
>sp|A7TKR8|DED1_VANPO ATP-dependent RNA helicase DED1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DED1 PE=3 SV=1
Length = 650
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 74/106 (69%)
Query: 3 YRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMY 62
+R T +HG ++Q +RE +L F+ N+LVAT VA RG+DIP+V HV+NYD+P +I+ Y
Sbjct: 442 FRATAIHGDRTQSERERALAAFKNGNANLLVATAVAARGLDIPNVTHVVNYDLPSDIDDY 501
Query: 63 THRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPEL 108
HRIGRTGRAG TGVAT F + ++ + ++L ++N +PP L
Sbjct: 502 VHRIGRTGRAGNTGVATAFFNRGNRNIVKGMYELLAEANQEIPPFL 547
>sp|Q9NXZ2|DDX43_HUMAN Probable ATP-dependent RNA helicase DDX43 OS=Homo sapiens GN=DDX43
PE=2 SV=2
Length = 648
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
Query: 5 VTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTH 64
V +LHG + Q RE +LE F+T + +L+ATD+A RG+D+ DV HV N+D P NIE Y H
Sbjct: 514 VESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVH 573
Query: 65 RIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFK 117
RIGRTGRAG+TGV+ T LT +D V +L +L ++N +P EL A +FK
Sbjct: 574 RIGRTGRAGRTGVSITTLTRNDWRVASELINILERANQSIPEELVSM-AERFK 625
>sp|Q0UWA6|DED1_PHANO ATP-dependent RNA helicase DED1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=DED1 PE=3 SV=1
Length = 696
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 74/104 (71%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G+ T++HG ++Q +RE +LE FR+ R +LVAT VA RG+DIP+V HV+NYD+P +I+
Sbjct: 484 GFPATSIHGDRTQREREKALEMFRSGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDD 543
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVP 105
Y HRIGRTGRAG TG+AT F + V DL +L ++N VP
Sbjct: 544 YVHRIGRTGRAGNTGIATAFFNRGNRGVVRDLLDLLKEANQEVP 587
>sp|Q0DB53|RH52A_ORYSJ DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp.
japonica GN=Os06g0602400 PE=2 SV=2
Length = 602
Score = 115 bits (289), Expect = 7e-26, Method: Composition-based stats.
Identities = 54/119 (45%), Positives = 79/119 (66%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G+ T +HG ++Q++RE +L F+T ++VATDVA RG+D+P+VAHVINYD+P +IE
Sbjct: 375 GFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPNVAHVINYDLPKSIED 434
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGT 120
Y HRIGRTGRAGK G AT F T D + L +++ ++ VP L ++ + G+
Sbjct: 435 YVHRIGRTGRAGKAGSATAFFTESDHSLAKGLLELMTEAKQDVPDWLVQYAERPYYGGS 493
>sp|A6ZP47|DED1_YEAS7 ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DED1 PE=3 SV=1
Length = 604
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 79/118 (66%), Gaps = 2/118 (1%)
Query: 3 YRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMY 62
+R T +HG ++Q +RE +L FR+ +LVAT VA RG+DIP+V HVINYD+P +++ Y
Sbjct: 424 FRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHVINYDLPSDVDDY 483
Query: 63 THRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAKHEASKFKPGT 120
HRIGRTGRAG TG+AT F ++++ L ++L ++N VP L +A PG+
Sbjct: 484 VHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFL--KDAMMSAPGS 539
>sp|A3LQ01|DED1_PICST ATP-dependent RNA helicase DED1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DED1 PE=3 SV=3
Length = 647
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 75/109 (68%)
Query: 2 GYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEM 61
G+ T +HG +SQ +RE +L F++ +LVAT VA RG+DIP+VAHVINYD+P +I+
Sbjct: 449 GFPATAIHGDRSQYEREKALAAFKSGAAPILVATAVAARGLDIPNVAHVINYDLPSDIDD 508
Query: 62 YTHRIGRTGRAGKTGVATTFLTFHDTDVFYDLKQMLIQSNSPVPPELAK 110
Y HRIGRTGRAG G+AT F ++ +V L +L ++N VP LAK
Sbjct: 509 YVHRIGRTGRAGNVGIATAFFNRNNKNVVKGLIDLLSEANQEVPDFLAK 557
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,174,433
Number of Sequences: 539616
Number of extensions: 2064500
Number of successful extensions: 7727
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1706
Number of HSP's successfully gapped in prelim test: 424
Number of HSP's that attempted gapping in prelim test: 5741
Number of HSP's gapped (non-prelim): 2191
length of query: 135
length of database: 191,569,459
effective HSP length: 100
effective length of query: 35
effective length of database: 137,607,859
effective search space: 4816275065
effective search space used: 4816275065
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)