Query 037143
Match_columns 382
No_of_seqs 491 out of 2732
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 15:17:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037143.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037143hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 2.3E-28 7.8E-33 210.5 7.7 138 14-163 15-153 (169)
2 4b93_B Ankyrin repeat domain-c 99.9 5.7E-28 1.9E-32 223.5 7.8 163 16-208 66-229 (269)
3 1oy3_D Transcription factor in 99.9 2.1E-26 7.1E-31 212.4 10.7 168 15-209 57-270 (282)
4 3aji_A 26S proteasome non-ATPa 99.9 1.7E-26 5.8E-31 207.3 9.2 164 16-209 53-217 (231)
5 1yyh_A HN1;, notch 1, ankyrin 99.9 5E-27 1.7E-31 214.6 5.5 168 13-207 33-200 (253)
6 1s70_B 130 kDa myosin-binding 99.9 2E-26 6.7E-31 215.0 9.4 170 14-213 51-281 (299)
7 2dzn_A Probable 26S proteasome 99.9 2.5E-26 8.7E-31 205.6 9.5 145 37-207 72-218 (228)
8 2rfa_A Transient receptor pote 99.9 2.8E-26 9.5E-31 206.2 9.8 175 15-207 15-207 (232)
9 3hra_A Ankyrin repeat family p 99.9 1.9E-26 6.4E-31 202.6 8.4 172 15-207 17-188 (201)
10 1yyh_A HN1;, notch 1, ankyrin 99.9 1.5E-26 5E-31 211.5 7.4 168 15-212 69-239 (253)
11 4gpm_A Engineered protein OR26 99.9 1.6E-26 5.5E-31 198.9 6.6 140 40-207 7-146 (169)
12 2f8y_A Notch homolog 1, transl 99.9 1.1E-26 3.6E-31 207.5 4.1 138 15-161 3-140 (223)
13 2f8y_A Notch homolog 1, transl 99.9 9.1E-26 3.1E-30 201.4 9.6 164 15-208 37-202 (223)
14 3v30_A DNA-binding protein rfx 99.9 3.5E-26 1.2E-30 196.2 6.6 139 14-162 13-151 (172)
15 2dzn_A Probable 26S proteasome 99.9 5E-26 1.7E-30 203.6 7.8 169 15-207 14-184 (228)
16 3b7b_A Euchromatic histone-lys 99.9 1.5E-25 5.3E-30 201.8 10.9 183 15-208 23-221 (237)
17 2etb_A Transient receptor pote 99.9 4E-26 1.4E-30 208.5 6.8 175 17-208 20-232 (256)
18 1awc_B Protein (GA binding pro 99.9 6.2E-26 2.1E-30 191.1 7.2 137 14-162 13-149 (153)
19 1k1a_A B-cell lymphoma 3-encod 99.9 1.6E-25 5.5E-30 201.9 9.3 166 34-208 43-227 (241)
20 2rfm_A Putative ankyrin repeat 99.9 8.1E-26 2.8E-30 197.6 7.0 148 33-208 31-178 (192)
21 2xai_A ASB-9, ankyrin repeat a 99.9 1.7E-25 5.8E-30 205.4 9.5 180 15-207 15-209 (261)
22 1sw6_A Regulatory protein SWI6 99.9 3.5E-26 1.2E-30 217.3 4.5 169 14-207 108-326 (327)
23 3aji_A 26S proteasome non-ATPa 99.9 8.3E-26 2.9E-30 202.8 6.6 166 14-207 17-182 (231)
24 1ikn_D Protein (I-kappa-B-alph 99.9 7E-26 2.4E-30 204.4 6.0 165 16-207 21-194 (236)
25 3utm_A Tankyrase-1; tankyrase, 99.9 3E-25 1E-29 210.7 10.1 91 34-130 55-145 (351)
26 1oy3_D Transcription factor in 99.9 5.5E-26 1.9E-30 209.6 4.7 166 15-207 21-235 (282)
27 3v31_A Ankyrin repeat family A 99.9 2E-25 6.7E-30 190.6 7.3 144 36-207 2-145 (167)
28 3b7b_A Euchromatic histone-lys 99.9 3.3E-25 1.1E-29 199.7 9.1 166 33-207 7-187 (237)
29 3twr_A Tankyrase-2; ankyrin re 99.9 1.8E-25 6.1E-30 190.5 6.8 153 34-213 5-157 (165)
30 4b93_B Ankyrin repeat domain-c 99.9 1.8E-24 6.1E-29 200.0 11.4 166 15-207 23-195 (269)
31 3d9h_A CDNA FLJ77766, highly s 99.9 7.4E-25 2.5E-29 204.0 8.8 180 15-207 71-265 (285)
32 2y1l_E Darpin-8.4; hydrolase-i 99.9 7.8E-25 2.7E-29 187.6 7.7 137 14-162 25-162 (169)
33 1n11_A Ankyrin; clathrin, BAND 99.9 8.8E-25 3E-29 215.0 9.0 163 16-208 225-388 (437)
34 1ihb_A P18-INK4C(INK6), cyclin 99.9 1E-24 3.4E-29 184.9 7.8 137 14-162 16-153 (162)
35 3v30_A DNA-binding protein rfx 99.9 2E-24 6.9E-29 185.2 9.8 150 37-213 2-152 (172)
36 4hbd_A KN motif and ankyrin re 99.9 3.9E-25 1.3E-29 205.1 4.6 166 15-207 88-260 (276)
37 3ljn_A Hypothetical protein; a 99.9 6.3E-25 2.1E-29 211.0 5.5 170 15-207 32-254 (364)
38 2xai_A ASB-9, ankyrin repeat a 99.9 1E-24 3.6E-29 200.1 6.6 179 15-207 48-248 (261)
39 3jxi_A Vanilloid receptor-rela 99.9 9.6E-25 3.3E-29 199.6 6.4 176 18-207 24-235 (260)
40 3twr_A Tankyrase-2; ankyrin re 99.9 7.1E-25 2.4E-29 186.7 4.9 137 14-161 19-155 (165)
41 1bd8_A P19INK4D CDK4/6 inhibit 99.9 3E-24 1E-28 180.9 8.5 137 14-162 13-149 (156)
42 1k1a_A B-cell lymphoma 3-encod 99.9 2.5E-24 8.7E-29 194.0 8.5 170 32-207 4-193 (241)
43 3v31_A Ankyrin repeat family A 99.9 1.9E-24 6.3E-29 184.5 7.1 137 14-162 14-151 (167)
44 1ikn_D Protein (I-kappa-B-alph 99.9 1.1E-24 3.7E-29 196.6 5.8 168 15-207 57-229 (236)
45 3f6q_A Integrin-linked protein 99.9 3.6E-24 1.2E-28 185.0 8.7 147 36-209 4-150 (179)
46 3utm_A Tankyrase-1; tankyrase, 99.9 3.7E-24 1.3E-28 203.1 9.5 163 15-207 70-290 (351)
47 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.2E-24 4.1E-29 197.3 5.5 173 14-207 16-191 (239)
48 3d9h_A CDNA FLJ77766, highly s 99.9 2.5E-24 8.5E-29 200.4 7.2 122 31-163 53-174 (285)
49 2y1l_E Darpin-8.4; hydrolase-i 99.9 1E-24 3.5E-29 186.8 4.1 147 34-208 11-157 (169)
50 2pnn_A Transient receptor pote 99.9 3.2E-24 1.1E-28 197.8 7.7 162 34-207 51-243 (273)
51 3f6q_A Integrin-linked protein 99.9 1.2E-24 4.2E-29 188.0 4.2 138 14-161 16-153 (179)
52 4g8k_A 2-5A-dependent ribonucl 99.9 3.7E-24 1.3E-28 203.5 7.8 185 15-207 37-283 (337)
53 3kea_A K1L; tropism, ANK repea 99.9 2E-24 7E-29 201.1 5.8 178 15-207 12-205 (285)
54 1wdy_A 2-5A-dependent ribonucl 99.9 8.3E-24 2.8E-28 194.7 9.5 166 15-207 17-192 (285)
55 2fo1_E LIN-12 protein; beta-ba 99.9 6.3E-24 2.1E-28 205.3 8.9 173 15-212 178-362 (373)
56 2rfa_A Transient receptor pote 99.9 6.1E-24 2.1E-28 190.8 8.1 145 36-207 2-164 (232)
57 2rfm_A Putative ankyrin repeat 99.9 1.7E-24 5.7E-29 189.2 4.1 136 15-162 47-183 (192)
58 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.7E-24 5.7E-29 183.6 4.0 144 36-207 4-147 (162)
59 1awc_B Protein (GA binding pro 99.9 1.3E-24 4.5E-29 183.0 2.8 143 37-208 2-144 (153)
60 1wdy_A 2-5A-dependent ribonucl 99.9 1.2E-23 4.2E-28 193.5 9.1 181 15-207 51-263 (285)
61 3eu9_A Huntingtin-interacting 99.9 1E-23 3.5E-28 189.3 7.6 183 14-207 20-220 (240)
62 1d9s_A Cyclin-dependent kinase 99.9 2.1E-24 7.1E-29 178.3 2.8 119 33-162 8-127 (136)
63 1bi7_B P16INK4A, MTS1, multipl 99.9 1.2E-24 4E-29 184.1 0.6 142 33-203 8-150 (156)
64 3c5r_A BARD-1, BRCA1-associate 99.9 1.4E-24 4.7E-29 179.4 0.6 124 29-162 2-125 (137)
65 1bd8_A P19INK4D CDK4/6 inhibit 99.9 7.4E-24 2.5E-28 178.5 5.1 141 37-207 2-143 (156)
66 3hra_A Ankyrin repeat family p 99.9 1.8E-23 6.3E-28 183.3 7.2 137 15-162 51-194 (201)
67 2vge_A RELA-associated inhibit 99.9 5.6E-25 1.9E-29 198.6 -2.6 179 19-207 1-198 (229)
68 1n11_A Ankyrin; clathrin, BAND 99.9 2.6E-23 8.9E-28 204.5 8.6 180 16-207 159-354 (437)
69 3kea_A K1L; tropism, ANK repea 99.9 1.9E-23 6.4E-28 194.6 6.3 102 49-162 10-111 (285)
70 4hbd_A KN motif and ankyrin re 99.9 3.4E-23 1.2E-27 192.0 7.0 140 15-162 123-266 (276)
71 2etb_A Transient receptor pote 99.9 7.2E-24 2.5E-28 193.5 2.4 138 14-163 57-238 (256)
72 1ycs_B 53BP2, P53BP2; ankyrin 99.9 5E-23 1.7E-27 186.6 7.1 141 35-204 3-144 (239)
73 2jab_A H10-2-G3; HER2, darpin, 99.9 1.1E-23 3.9E-28 173.8 2.3 119 34-162 11-129 (136)
74 3eu9_A Huntingtin-interacting 99.9 1.7E-22 5.9E-27 181.3 10.1 123 32-163 4-126 (240)
75 2pnn_A Transient receptor pote 99.9 1.8E-23 6.2E-28 192.8 3.4 140 14-163 68-250 (273)
76 2vge_A RELA-associated inhibit 99.9 3.8E-24 1.3E-28 193.1 -1.7 126 56-204 2-128 (229)
77 3t8k_A Uncharacterized protein 99.9 5.7E-24 2E-28 185.8 -0.5 136 16-163 19-171 (186)
78 3jxi_A Vanilloid receptor-rela 99.9 1.5E-23 5E-28 191.8 2.0 139 15-163 61-242 (260)
79 3aaa_C Myotrophin, protein V-1 99.9 1E-23 3.5E-28 170.9 0.8 114 34-157 4-117 (123)
80 3ljn_A Hypothetical protein; a 99.9 4.2E-23 1.4E-27 198.2 4.0 157 33-207 134-299 (364)
81 2fo1_E LIN-12 protein; beta-ba 99.9 5E-23 1.7E-27 199.0 4.6 161 18-207 148-323 (373)
82 1n0r_A 4ANK, 4 ankyrin repeats 99.9 7.2E-23 2.5E-27 165.4 4.4 117 36-162 1-117 (126)
83 3ui2_A Signal recognition part 99.9 1.7E-22 5.8E-27 183.9 6.8 114 34-158 42-156 (244)
84 1s70_B 130 kDa myosin-binding 99.9 7E-23 2.4E-27 190.8 3.9 119 34-162 37-155 (299)
85 3deo_A Signal recognition part 99.9 2.2E-22 7.5E-27 174.7 5.4 114 34-158 41-155 (183)
86 1bi7_B P16INK4A, MTS1, multipl 99.9 8.8E-22 3E-26 166.3 8.9 127 14-153 23-151 (156)
87 3t8k_A Uncharacterized protein 99.9 1.1E-22 3.6E-27 177.8 2.5 158 37-219 6-177 (186)
88 1sw6_A Regulatory protein SWI6 99.9 2E-22 6.8E-27 191.4 4.6 132 15-157 143-327 (327)
89 3c5r_A BARD-1, BRCA1-associate 99.8 5.1E-21 1.8E-25 157.8 10.4 116 70-208 5-120 (137)
90 3ehr_A Osteoclast-stimulating 99.8 2.3E-22 8E-27 179.7 0.3 120 34-163 70-190 (222)
91 3aaa_C Myotrophin, protein V-1 99.8 2.2E-20 7.6E-25 151.1 9.2 113 72-207 4-116 (123)
92 4g8k_A 2-5A-dependent ribonucl 99.8 7.4E-21 2.5E-25 180.6 6.8 159 15-207 137-311 (337)
93 2b0o_E UPLC1; arfgap, structur 99.8 2.8E-21 9.5E-26 181.5 2.6 128 15-158 163-298 (301)
94 3jue_A Arfgap with coiled-coil 99.8 9.2E-21 3.1E-25 182.6 5.6 146 37-207 199-347 (368)
95 1d9s_A Cyclin-dependent kinase 99.8 2.6E-20 8.8E-25 153.6 6.3 109 15-132 24-134 (136)
96 3ehr_A Osteoclast-stimulating 99.8 6.9E-20 2.4E-24 163.6 9.6 150 33-207 21-183 (222)
97 2l6b_A NR1C; ankyrin, consensu 99.8 1E-20 3.5E-25 151.2 3.1 108 33-150 5-112 (115)
98 2b0o_E UPLC1; arfgap, structur 99.8 3E-20 1E-24 174.4 6.6 137 37-207 151-296 (301)
99 3deo_A Signal recognition part 99.8 1.9E-20 6.4E-25 162.5 4.5 113 72-208 41-154 (183)
100 3ui2_A Signal recognition part 99.8 2.1E-20 7E-25 170.0 4.8 141 35-207 13-154 (244)
101 2jab_A H10-2-G3; HER2, darpin, 99.8 4.6E-20 1.6E-24 152.0 6.2 111 14-132 25-136 (136)
102 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.8E-20 9.6E-25 143.0 4.3 84 75-163 2-85 (93)
103 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.8E-19 6.3E-24 138.4 8.2 91 36-132 1-91 (93)
104 1n0r_A 4ANK, 4 ankyrin repeats 99.8 4.6E-19 1.6E-23 142.8 9.3 111 74-207 1-111 (126)
105 1dcq_A PYK2-associated protein 99.8 2.4E-19 8.3E-24 166.3 4.7 119 37-162 130-254 (278)
106 2l6b_A NR1C; ankyrin, consensu 99.7 7.8E-19 2.7E-23 140.1 6.1 109 70-201 4-112 (115)
107 1dcq_A PYK2-associated protein 99.7 2E-19 6.7E-24 166.9 2.3 111 16-132 143-261 (278)
108 3lvq_E ARF-GAP with SH3 domain 99.7 5.9E-19 2E-23 176.9 4.2 116 38-163 133-257 (497)
109 3lvq_E ARF-GAP with SH3 domain 99.7 1.3E-18 4.6E-23 174.3 6.0 126 14-155 143-276 (497)
110 3jue_A Arfgap with coiled-coil 99.7 3.5E-18 1.2E-22 164.5 5.6 136 14-158 211-349 (368)
111 2zgd_A 3 repeat synthetic anky 99.7 9.3E-18 3.2E-22 133.2 7.0 89 69-162 18-106 (110)
112 2aja_A Ankyrin repeat family p 99.7 9.4E-20 3.2E-24 176.1 -5.8 121 36-163 91-216 (376)
113 2aja_A Ankyrin repeat family p 99.7 5.5E-20 1.9E-24 177.7 -7.6 134 15-163 104-242 (376)
114 2zgd_A 3 repeat synthetic anky 99.7 5.5E-18 1.9E-22 134.5 1.7 96 27-128 14-109 (110)
115 4ev6_A Magnesium transport pro 40.0 32 0.0011 31.6 5.0 21 310-330 281-301 (339)
116 2iub_A CORA, divalent cation t 39.5 24 0.00083 32.7 4.2 21 310-330 305-325 (363)
117 1gp8_A Protein (scaffolding pr 27.3 39 0.0013 20.3 2.0 19 78-96 16-34 (40)
118 1vry_A Glycine receptor alpha- 27.1 1.4E+02 0.0049 20.8 5.4 36 323-358 18-53 (76)
119 3arc_I Photosystem II reaction 20.5 1.4E+02 0.0049 17.7 3.5 11 368-378 23-33 (38)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.95 E-value=2.3e-28 Score=210.54 Aligned_cols=138 Identities=19% Similarity=0.191 Sum_probs=126.3
Q ss_pred HHHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHH
Q 037143 14 WAIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVK 92 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~ 92 (382)
...++|+.||++ |++.+. |.+|+||||+|+ ..++.+++++|++.+++. +.+|.+|+||||+||..|+.++++
T Consensus 15 G~~~~v~~Ll~~--Gadvn~~d~~g~t~l~~a~--~~~~~~~~~~ll~~gad~---~~~d~~g~TpLh~A~~~g~~~~v~ 87 (169)
T 4gpm_A 15 GNKDRVKDLIEN--GADVNASDSDGRTPLHHAA--ENGHKEVVKLLISKGADV---NAKDSDGRTPLHHAAENGHKEVVK 87 (169)
T ss_dssp TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHH--HcCCHHHHHHHHhcccch---hhhccCCCCHHHHHHHcCCHHHHH
Confidence 347899999999 777765 556999999999 779999999999999876 788899999999999999999999
Q ss_pred HHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccc
Q 037143 93 KILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLL 163 (382)
Q Consensus 93 ~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~ 163 (382)
+|++.+++ ++.+|.+|+||||+|+..|+.+++++|++.| ++++.+|.+|+||||+|+..|+.++++
T Consensus 88 ~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g----ad~~~~d~~G~TpL~~A~~~g~~~iv~ 153 (169)
T 4gpm_A 88 LLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKG----ADVNTSDSDGRTPLDLAREHGNEEVVK 153 (169)
T ss_dssp HHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHCcCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCccccCCCCCCHHHHHHHcCCHHHHH
Confidence 99999888 7889999999999999999999999999998 799999999999999999999977654
No 2
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.94 E-value=5.7e-28 Score=223.55 Aligned_cols=163 Identities=17% Similarity=0.125 Sum_probs=134.9
Q ss_pred HHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHH
Q 037143 16 IQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKI 94 (382)
Q Consensus 16 ~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~L 94 (382)
.+++++|+++ |++.+. |.+|+||||+|+ ..|+.+++++|++.+++. +..+.+|.||+|.|+..|+.++++.|
T Consensus 66 ~~~v~~Ll~~--Gadvn~~d~~G~TpLh~A~--~~g~~~~v~~Ll~~~a~~---~~~~~~g~t~l~~a~~~~~~~~~~~L 138 (269)
T 4b93_B 66 QKRLAKVPAS--GLGVNVTSQDGSSPLHVAA--LHGRADLIPLLLKHGANA---GARNADQAVPLHLACQQGHFQVVKCL 138 (269)
T ss_dssp ---------C--CCCTTCCCTTSCCHHHHHH--HTTCTTHHHHHHHTTCCT---TCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHC--CCCCCCcCCCCCCHHHHHH--HcCcHHHHHHHHhcCCCc---CccCCCCCCccccccccChHHHHHHH
Confidence 3578899988 777765 556999999999 789999999999998876 77788999999999999999999999
Q ss_pred hhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHH
Q 037143 95 LDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWE 174 (382)
Q Consensus 95 l~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~ 174 (382)
++.+++ ++.+|..|+||||+|+..|+.+++++|++.| +++|.+|.+|+||||+|+..|+.+++++
T Consensus 139 l~~g~~-~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g----advn~~~~~g~t~Lh~A~~~g~~~~v~~---------- 203 (269)
T 4b93_B 139 LDSNAK-PNKKDLSGNTPLIYACSGGHHELVALLLQHG----ASINASNNKGNTALHEAVIEKHVFVVEL---------- 203 (269)
T ss_dssp HHTTCC-SCCCCTTCCCHHHHHHHTTCGGGHHHHHHTT----CCTTCBCTTSCBHHHHHHHTTCHHHHHH----------
T ss_pred HHCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC----CCCCccccCCCcHHHHHHHcCCHHHHHH----------
Confidence 999887 6888999999999999999999999999998 7999999999999999999999766432
Q ss_pred HHHHHHHHhhccccccccccCCCCCccccchhhh
Q 037143 175 IKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTESH 208 (382)
Q Consensus 175 ~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~~ 208 (382)
.++. +.+++.+|++|+||+++|.+..
T Consensus 204 -----Ll~~---Gad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 204 -----LLLH---GASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp -----HHHT---TCCSCCCCTTSCCSGGGSCTTC
T ss_pred -----HHHC---CCCCCCcCCCCCCHHHHHHhCC
Confidence 2222 2346799999999999997653
No 3
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.93 E-value=2.1e-26 Score=212.44 Aligned_cols=168 Identities=18% Similarity=0.083 Sum_probs=116.3
Q ss_pred HHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchh----------------------------
Q 037143 15 AIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYK---------------------------- 65 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~---------------------------- 65 (382)
..+++++|+++ +++.+. +..|+||||+|+ ..++.+++++|++.+++.
T Consensus 57 ~~~~v~~Ll~~--ga~~~~~~~~g~tpL~~A~--~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (282)
T 1oy3_D 57 EASTVEKLYAA--GAGVLVAERGGHTALHLAC--RVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDS 132 (282)
T ss_dssp CHHHHHHHHHT--TCCSSCCCTTSCCHHHHHT--TTTCHHHHHHHSSSCCSSCCCC------------------------
T ss_pred CHHHHHHHHHc--CCCCCCCCCCCCCHHHHHH--HcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhcc
Confidence 46788888888 666654 445899999988 678888888888876431
Q ss_pred ----------------hhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCC-CCCcHHHHHHHcCCHHHHHHH
Q 037143 66 ----------------KKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDP-AEKNILLLAIENRRTSVYNLL 128 (382)
Q Consensus 66 ----------------~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~-~G~t~Lh~A~~~g~~~iv~~L 128 (382)
...+..+..|.||||+|+..|+.+++++|++.+++ ++..+. .|+||||+|+..|+.+++++|
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~L 211 (282)
T 1oy3_D 133 QPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD-LNKPEPTCGRTPLHLAVEAQAASVLELL 211 (282)
T ss_dssp -----------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHH
T ss_pred ccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcCHHHHHHHcCCHHHHHHH
Confidence 11255677889999999999999999999988877 455554 589999999999999999999
Q ss_pred HhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccccCCCCCccccchhhh
Q 037143 129 LSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTESH 208 (382)
Q Consensus 129 l~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~~ 208 (382)
++.| ++++.+|.+|+||||+|+..|+.+++++ .++. +..++.+|++|.||++.+....
T Consensus 212 l~~g----ad~~~~d~~g~tpL~~A~~~~~~~~v~~---------------Ll~~---ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 212 LKAG----ADPTARMYGGRTPLGSALLRPNPILARL---------------LRAH---GAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHTT----CCTTCCCTTSCCHHHHHHTSSCHHHHHH---------------HHHT---TCCCCCCC--------------
T ss_pred HHcC----CCCcccccCCCCHHHHHHHcCCcHHHHH---------------HHHc---CCCcCcCCCcccccccccCCcc
Confidence 9888 7888899999999999998888655431 1222 2335689999999999987765
Q ss_pred H
Q 037143 209 R 209 (382)
Q Consensus 209 ~ 209 (382)
.
T Consensus 270 ~ 270 (282)
T 1oy3_D 270 D 270 (282)
T ss_dssp -
T ss_pred c
Confidence 4
No 4
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.93 E-value=1.7e-26 Score=207.28 Aligned_cols=164 Identities=17% Similarity=0.060 Sum_probs=80.8
Q ss_pred HHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHH
Q 037143 16 IQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKI 94 (382)
Q Consensus 16 ~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~L 94 (382)
.+++++|+++ +.+.+. |..|+||||+|+ ..++.+++++|++.+++. +..|..|.||||+|+..|+.+++++|
T Consensus 53 ~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~~~~L 125 (231)
T 3aji_A 53 TEIVEFLLQL--GVPVNDKDDAGWSPLHIAA--SAGXDEIVKALLVKGAHV---NAVNQNGCTPLHYAASKNRHEIAVML 125 (231)
T ss_dssp HHHHHHHHHT--TCCSCCCCTTSCCHHHHHH--HHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHh--CCCCCCcCCCCCCHHHHHH--HcCHHHHHHHHHHcCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 3444455544 333322 223555555554 334444555554444433 33444455555555555555555555
Q ss_pred hhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHH
Q 037143 95 LDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWE 174 (382)
Q Consensus 95 l~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~ 174 (382)
++.+.+ ++..|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+||||+|+..|+.++++
T Consensus 126 l~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~~~v~----------- 189 (231)
T 3aji_A 126 LEGGAN-PDAKDHYDATAMHRAAAKGNLKMVHILLFYK----ASTNIQDTEGNTPLHLACDEERVEEAK----------- 189 (231)
T ss_dssp HHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT----CCSCCCCTTSCCHHHHHHHTTCHHHHH-----------
T ss_pred HHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC----CCccccCCCCCCHHHHHHHCCCHHHHH-----------
Confidence 544443 3334444555555555555555555555544 344555555555555555544433221
Q ss_pred HHHHHHHHhhccccccccccCCCCCccccchhhhH
Q 037143 175 IKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTESHR 209 (382)
Q Consensus 175 ~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~~~ 209 (382)
+ .++. +.+++.+|++|+||+++|.+.+.
T Consensus 190 --~--Ll~~---ga~~~~~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 190 --F--LVTQ---GASIYIENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp --H--HHHT---TCCSCCCCTTSCCHHHHSCHHHH
T ss_pred --H--HHHC---CCCCCCCCCCCCCHHHHHHhhHH
Confidence 0 1122 23456888899999999876544
No 5
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.93 E-value=5e-27 Score=214.55 Aligned_cols=168 Identities=15% Similarity=0.086 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHcCCCCCCcccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHH
Q 037143 13 TWAIQVLNELVDHRNPDQYKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVK 92 (382)
Q Consensus 13 ~~~~eiv~~Ll~~~~~~~~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~ 92 (382)
....++++.|+++++......|..|+||||+|+ ..++.+++++|++.+++. +..|..|+||||+|+..|+.++++
T Consensus 33 ~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~--~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~ 107 (253)
T 1yyh_A 33 EDAPAVISDFIYQGASLHNQTDRTGETALHLAA--RYSRSDAAKRLLEASADA---NIQDNMGRTPLHAAVSADAQGVFQ 107 (253)
T ss_dssp -------------------CCCTTSCCHHHHHH--HTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred CCChHHHHHHHHccCCcccccCCCCCcHHHHHH--HcCCHHHHHHHHHcCCCC---CCCCCCCCCHHHHHHHcCCHHHHH
Confidence 346789999999954444445677999999999 779999999999998876 777889999999999999999999
Q ss_pred HHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhH
Q 037143 93 KILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQ 172 (382)
Q Consensus 93 ~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~ 172 (382)
+|++.++..++..|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+||||+|+..|+.++++.
T Consensus 108 ~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~d~~g~t~L~~A~~~~~~~~v~~-------- 175 (253)
T 1yyh_A 108 ILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH----ADVNAVDDLGKSALHWAAAVNNVDAAVV-------- 175 (253)
T ss_dssp HHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTT----CCTTCBCTTSCBHHHHHHHHTCHHHHHH--------
T ss_pred HHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcC----CCCCCcCCCCCCHHHHHHHcCCHHHHHH--------
Confidence 9999987557888999999999999999999999999998 7899999999999999999998665432
Q ss_pred HHHHHHHHHHhhccccccccccCCCCCccccchhh
Q 037143 173 WEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 173 ~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~ 207 (382)
.++. +.+++.+|++|.||+++|...
T Consensus 176 -------Ll~~---ga~~~~~~~~g~tpL~~A~~~ 200 (253)
T 1yyh_A 176 -------LLKN---GANKDMQNNREETPLFLAARE 200 (253)
T ss_dssp -------HHHT---TCCTTCCCTTSCCHHHHHHHH
T ss_pred -------HHHc---CCCCCCcCCCCCCHHHHHHHC
Confidence 1111 122445666666666666543
No 6
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.93 E-value=2e-26 Score=214.97 Aligned_cols=170 Identities=15% Similarity=0.126 Sum_probs=140.3
Q ss_pred HHHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHH
Q 037143 14 WAIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVK 92 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~ 92 (382)
...++++.|+++ +.+.+. |.+|+||||+|+ ..|+.+++++|++.+++. +..|..|+||||+|+..|+.++++
T Consensus 51 g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~ga~~---~~~~~~g~tpL~~A~~~g~~~~v~ 123 (299)
T 1s70_B 51 GDTEEVLRLLER--GADINYANVDGLTALHQAC--IDDNVDMVKFLVENGANI---NQPDNEGWIPLHAAASCGYLDIAE 123 (299)
T ss_dssp TCHHHHHHHHHH--CCCTTCBCTTCCBHHHHHH--HTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred CCHHHHHHHHHc--CCCCcccCCCCCCHHHHHH--HcCCHHHHHHHHHCCCCC---CCCCCCCCcHHHHHHHcCCHHHHH
Confidence 347899999998 666654 556999999999 779999999999998876 777889999999999999999999
Q ss_pred HHhhhCCCCcccc------------------------------------------------------------CCCCCcH
Q 037143 93 KILDTFPVAMWDL------------------------------------------------------------DPAEKNI 112 (382)
Q Consensus 93 ~Ll~~~~~~~~~~------------------------------------------------------------d~~G~t~ 112 (382)
+|++.+++ ++.. +..|+||
T Consensus 124 ~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~ 202 (299)
T 1s70_B 124 YLISQGAH-VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTA 202 (299)
T ss_dssp HHHHTTCC-TTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCH
T ss_pred HHHhCCCC-CCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCH
Confidence 99998765 2222 3568899
Q ss_pred HHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhcccccccc
Q 037143 113 LLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTR 192 (382)
Q Consensus 113 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~ 192 (382)
||+|+..|+.+++++|++.| +++|.+|.+|+||||+|+..|+.+++++ .++. +.+++.
T Consensus 203 L~~A~~~g~~~~v~~Ll~~g----~d~~~~d~~g~tpL~~A~~~~~~~~v~~---------------Ll~~---gad~~~ 260 (299)
T 1s70_B 203 LHVAAAKGYTEVLKLLIQAR----YDVNIKDYDGWTPLHAAAHWGKEEACRI---------------LVEN---LCDMEA 260 (299)
T ss_dssp HHHHHHHTCHHHHHHHHTTT----CCTTCCCTTCCCHHHHHHHTTCHHHHHH---------------HHHT---TCCTTC
T ss_pred HHHHHHCCcHHHHHHHHHcC----CCCCCcCCCCCcHHHHHHhcCCHHHHHH---------------HHHc---CCCCCC
Confidence 99999999999999999998 7999999999999999999999665432 2222 234678
Q ss_pred ccCCCCCccccchhhhHHHHH
Q 037143 193 YNDDGKTPDEVFTESHRDLVK 213 (382)
Q Consensus 193 ~N~~G~Tpldla~~~~~~l~~ 213 (382)
+|+.|+||+++|.+...+.++
T Consensus 261 ~d~~g~t~l~~A~~~~~~~l~ 281 (299)
T 1s70_B 261 VNKVGQTAFDVADEDILGYLE 281 (299)
T ss_dssp CCTTSCCTTTSCCSGGGHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHH
Confidence 999999999999877554443
No 7
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.93 E-value=2.5e-26 Score=205.55 Aligned_cols=145 Identities=14% Similarity=0.070 Sum_probs=71.9
Q ss_pred CCCCcccccccCCCcccccccCCCCC--chhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHH
Q 037143 37 GQDPRISTFGQDVNAFTARETPLDPS--TYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILL 114 (382)
Q Consensus 37 G~TPLh~A~~~~~~~~~~v~~Ll~~~--~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh 114 (382)
|+||||+|+ ..++.+++++|++.+ ++. +..+..|.||||+|+..|+.+++++|++.+.+ ++.+|..|+||||
T Consensus 72 g~t~L~~A~--~~~~~~~~~~Ll~~g~~~~~---~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~ 145 (228)
T 2dzn_A 72 GWTPFHIAC--SVGNLEVVKSLYDRPLKPDL---NKITNQGVTCLHLAVGKKWFEVSQFLIENGAS-VRIKDKFNQIPLH 145 (228)
T ss_dssp SCCHHHHHH--HHCCHHHHHHHHSSSSCCCT---TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SCCCCTTSCCHHH
T ss_pred CCCHHHHHH--HcCCHHHHHHHHhCCCCccc---ccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC-ccccCCCCCCHHH
Confidence 444444444 334444444444443 222 33344444444444444444444444444433 3344444455555
Q ss_pred HHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhcccccccccc
Q 037143 115 LAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYN 194 (382)
Q Consensus 115 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N 194 (382)
+|+..|+.+++++|++.+ .++++.+|.+|+||||+|+..|+.++++. .++ ..+.+++.+|
T Consensus 146 ~A~~~~~~~~v~~Ll~~g---~~~~~~~d~~g~t~L~~A~~~~~~~~v~~---------------Ll~--~~ga~~~~~~ 205 (228)
T 2dzn_A 146 RAASVGSLKLIELLCGLG---KSAVNWQDKQGWTPLFHALAEGHGDAAVL---------------LVE--KYGAEYDLVD 205 (228)
T ss_dssp HHHHTTCHHHHHHHHTTT---CCCSCCCCTTSCCHHHHHHHTTCHHHHHH---------------HHH--HHCCCSCCBC
T ss_pred HHHHcCCHHHHHHHHhcC---cccccCcCCCCCCHHHHHHHcCCHHHHHH---------------HHH--hcCCCCCccC
Confidence 555555555555544444 13444444555555555554444332210 110 1234567899
Q ss_pred CCCCCccccchhh
Q 037143 195 DDGKTPDEVFTES 207 (382)
Q Consensus 195 ~~G~Tpldla~~~ 207 (382)
++|+||+++|.+.
T Consensus 206 ~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 206 NKGAKAEDVALNE 218 (228)
T ss_dssp TTSCBGGGGCSST
T ss_pred CCCCcHHHHHHHH
Confidence 9999999999764
No 8
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.93 E-value=2.8e-26 Score=206.18 Aligned_cols=175 Identities=13% Similarity=0.033 Sum_probs=136.7
Q ss_pred HHHHHHHHHcCCCCCCcccccCCCCCcccccccCCCcccccccCCCCCchhhhh--hhccCCCCcHHHHHHHcCcHHHHH
Q 037143 15 AIQVLNELVDHRNPDQYKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKN--ARRSRRKETPILVAAKMGVTEMVK 92 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~--~~~~~~g~tpLh~Aa~~g~~~~v~ 92 (382)
..++++.|+++.+......|..|+||||+|+ ..++.+++++|++.+++.... +..|..|+||||+|+..|+.++++
T Consensus 15 ~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 92 (232)
T 2rfa_A 15 DVQALSKLLKFEGCEVHQRGAMGETALHIAA--LYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVR 92 (232)
T ss_dssp CHHHHHHHHTTTCSCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHH
T ss_pred CHHHHHHHHHhcCCCcccCCCCCCCHHHHHH--HcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHH
Confidence 4689999998743344445667999999999 779999999999988764221 445678999999999999999999
Q ss_pred HHhhhCCCCccccCC-------------CCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCC
Q 037143 93 KILDTFPVAMWDLDP-------------AEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDH 159 (382)
Q Consensus 93 ~Ll~~~~~~~~~~d~-------------~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~ 159 (382)
+|++.+++ ++..+. +|+||||+|+..|+.+++++|++.| +++|.+|.+|+||||+|+..|+.
T Consensus 93 ~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~d~~g~t~L~~A~~~~~~ 167 (232)
T 2rfa_A 93 ALLARGAS-VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG----ADIRAQDSLGNTVLHILILQPNK 167 (232)
T ss_dssp HHHHTTCC-TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHTCSCH
T ss_pred HHHhCCCC-CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC----CCCCCCCCCCCCHHHHHHHcCCh
Confidence 99999877 444444 7999999999999999999999998 79999999999999999999985
Q ss_pred CccccCcchhhhHHHHHHHHHHHhhccc---cccccccCCCCCccccchhh
Q 037143 160 LPLLFPGAALQVQWEIKWFQHVKKLMPR---HFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 160 ~~~~~~~~~l~~~~~~~~~~~v~~~~~~---~~~~~~N~~G~Tpldla~~~ 207 (382)
+++.. -+++ .++..... ...+.+|++|.||+++|.+.
T Consensus 168 ~~~~~---------i~~~--Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~ 207 (232)
T 2rfa_A 168 TFACQ---------MYNL--LLSYDGGDHLKSLELVPNNQGLTPFKLAGVE 207 (232)
T ss_dssp HHHHH---------HHHH--HHHTTCSCSSCCGGGCCCTTSCCHHHHHHHH
T ss_pred HHHHH---------HHHH--HHhcCCchhhhhhhccCCCCCCCHHHHHHHc
Confidence 54310 0011 11211111 11258899999999999875
No 9
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.93 E-value=1.9e-26 Score=202.56 Aligned_cols=172 Identities=16% Similarity=0.123 Sum_probs=140.4
Q ss_pred HHHHHHHHHcCCCCCCcccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHH
Q 037143 15 AIQVLNELVDHRNPDQYKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKI 94 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~L 94 (382)
..+.++.|+++++......|.+|+||||+|+ ..++.+++++|++.+++. +..|..|+||||+|+..|+.+++++|
T Consensus 17 ~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~l~~A~~~~~~~~~~~L 91 (201)
T 3hra_A 17 DTKKVKEILQDTTYQVDEVDTEGNTPLNIAV--HNNDIEIAKALIDRGADI---NLQNSISDSPYLYAGAQGRTEILAYM 91 (201)
T ss_dssp CHHHHHHHHTCTTCCTTCCCTTSCCHHHHHH--HHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4678899998854444455677999999999 779999999999998876 77888999999999999999999999
Q ss_pred hhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHH
Q 037143 95 LDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWE 174 (382)
Q Consensus 95 l~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~ 174 (382)
++.++..++..|..|+||||+|+..|+.+++++|++.+. .+++.+|.+|+||||+|+..++..-. ... -
T Consensus 92 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---~~~~~~~~~g~t~L~~A~~~~~~~~~-----~~~---~ 160 (201)
T 3hra_A 92 LKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGR---EDIDFQNDFGYTALIEAVGLREGNQL-----YQD---I 160 (201)
T ss_dssp HHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCC---CCTTCCCTTSCCHHHHHHHSSCCSHH-----HHH---H
T ss_pred HhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCC---CCcCCCCCCCCCHHHHHHHhccchhh-----HHH---H
Confidence 977766688899999999999999999999999999983 68999999999999999998872110 000 0
Q ss_pred HHHHHHHHhhccccccccccCCCCCccccchhh
Q 037143 175 IKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 175 ~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~ 207 (382)
+++ .++. +.+++.+|.+|.||+++|.+.
T Consensus 161 v~~--Ll~~---ga~~~~~~~~g~t~l~~A~~~ 188 (201)
T 3hra_A 161 VKL--LMEN---GADQSIKDNSGRTAMDYANQK 188 (201)
T ss_dssp HHH--HHHT---TCCTTCCCTTSCCHHHHHHHH
T ss_pred HHH--HHHC---CCCCCccCCCCCCHHHHHHHc
Confidence 111 1222 234578999999999999775
No 10
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.93 E-value=1.5e-26 Score=211.46 Aligned_cols=168 Identities=17% Similarity=0.183 Sum_probs=142.8
Q ss_pred HHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCc-hhhhhhhccCCCCcHHHHHHHcCcHHHHH
Q 037143 15 AIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPST-YKKKNARRSRRKETPILVAAKMGVTEMVK 92 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~ 92 (382)
..+++++|+++ +.+.+. |..|+||||+|+ ..++.+++++|++.++ +. +..+..|.||||+|+..|+.++++
T Consensus 69 ~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~ 141 (253)
T 1yyh_A 69 RSDAAKRLLEA--SADANIQDNMGRTPLHAAV--SADAQGVFQILIRNRATDL---DARMHDGTTPLILAARLAVEGMLE 141 (253)
T ss_dssp CHHHHHHHHHT--TCCTTCCCTTSCCHHHHHH--HHTCHHHHHHHHHSTTSCT---TCCCTTCCCHHHHHHHHTCSSHHH
T ss_pred CHHHHHHHHHc--CCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCCc---cccCCCCCcHHHHHHHcChHHHHH
Confidence 46899999999 666665 455999999999 7799999999998875 43 677889999999999999999999
Q ss_pred HHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhH
Q 037143 93 KILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQ 172 (382)
Q Consensus 93 ~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~ 172 (382)
+|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.| ++++.+|.+|+||||+|+..|+.++++.
T Consensus 142 ~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~tpL~~A~~~~~~~~v~~-------- 208 (253)
T 1yyh_A 142 DLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNG----ANKDMQNNREETPLFLAAREGSYETAKV-------- 208 (253)
T ss_dssp HHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHHTCHHHHHH--------
T ss_pred HHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCCcCCCCCCHHHHHHHCCCHHHHHH--------
Confidence 99999887 6788999999999999999999999999998 7999999999999999999999665432
Q ss_pred HHHHHHHHHHhhccccccccccCCCCCccccchhh-hHHHH
Q 037143 173 WEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTES-HRDLV 212 (382)
Q Consensus 173 ~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~-~~~l~ 212 (382)
.++. ..+++.+|..|+||+++|.++ +.++.
T Consensus 209 -------Ll~~---ga~~~~~d~~g~tpl~~A~~~g~~~i~ 239 (253)
T 1yyh_A 209 -------LLDH---FANRDITDHMDRLPRDIAQERMHHDIV 239 (253)
T ss_dssp -------HHHT---TCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred -------HHHc---CCCccccccCCCCHHHHHHHcCCHHHH
Confidence 2222 233568999999999999776 44443
No 11
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.93 E-value=1.6e-26 Score=198.95 Aligned_cols=140 Identities=22% Similarity=0.225 Sum_probs=124.9
Q ss_pred CcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHHHHHHc
Q 037143 40 PRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILLLAIEN 119 (382)
Q Consensus 40 PLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~ 119 (382)
+|+.|+ +.|+.++|+.|++.|++. +.+|.+|+||||+|+..|+.++++.|++.+.+ ++.+|.+|+||||+|+..
T Consensus 7 ~L~~Aa--~~G~~~~v~~Ll~~Gadv---n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad-~~~~d~~g~TpLh~A~~~ 80 (169)
T 4gpm_A 7 RLIEAA--ENGNKDRVKDLIENGADV---NASDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAEN 80 (169)
T ss_dssp HHHHHH--HTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHT
T ss_pred HHHHHH--HcCCHHHHHHHHHCCCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc-hhhhccCCCCHHHHHHHc
Confidence 689999 789999999999999887 88899999999999999999999999999887 688999999999999999
Q ss_pred CCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccccCCCCC
Q 037143 120 RRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYNDDGKT 199 (382)
Q Consensus 120 g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~~G~T 199 (382)
|+.+++++|++.| +++|.+|.+|+||||+|+..|+.+++++ .++. ..+++.+|++|+|
T Consensus 81 g~~~~v~~Ll~~g----advn~~d~~G~TpLh~A~~~g~~~~v~~---------------Ll~~---gad~~~~d~~G~T 138 (169)
T 4gpm_A 81 GHKEVVKLLISKG----ADVNAKDSDGRTPLHHAAENGHKEVVKL---------------LISK---GADVNTSDSDGRT 138 (169)
T ss_dssp TCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHTTCHHHHHH---------------HHHT---TCCTTCCCTTSCC
T ss_pred CCHHHHHHHHHCc----CCCCCCCCCCCCHHHHHHHcCCHHHHHH---------------HHHc---CCCccccCCCCCC
Confidence 9999999999999 7999999999999999999999665432 2222 2346789999999
Q ss_pred ccccchhh
Q 037143 200 PDEVFTES 207 (382)
Q Consensus 200 pldla~~~ 207 (382)
|+++|.+.
T Consensus 139 pL~~A~~~ 146 (169)
T 4gpm_A 139 PLDLAREH 146 (169)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 99999765
No 12
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.92 E-value=1.1e-26 Score=207.50 Aligned_cols=138 Identities=16% Similarity=0.112 Sum_probs=94.6
Q ss_pred HHHHHHHHHcCCCCCCcccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHH
Q 037143 15 AIQVLNELVDHRNPDQYKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKI 94 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~L 94 (382)
+.+++++|+++++......|.+|+||||+|+ ..++.+++++|++.+++. +..|..|+||||+|+..|+.+++++|
T Consensus 3 ~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~--~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~L 77 (223)
T 2f8y_A 3 APAVISDFIYQGASLHNQTDRTGETALHLAA--RYSRSDAAKRLLEASADA---NIQDNMGRTPLHAAVSADAQGVFQIL 77 (223)
T ss_dssp --CCEETTEETTCCTTCCCTTTCCCHHHHHH--HTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cHHHHHHHHHcCCCcccccCCCCCchHHHHH--HcCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 3456667777743333334556777777777 567777777777776654 55666777777777777777777777
Q ss_pred hhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCc
Q 037143 95 LDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLP 161 (382)
Q Consensus 95 l~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~ 161 (382)
++.++..++..|..|+||||+|+..|+.+++++|++.+ .+++.+|.+|+||||+|+..|+.++
T Consensus 78 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~~~ 140 (223)
T 2f8y_A 78 IRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH----ADVNAVDDLGKSALHWAAAVNNVDA 140 (223)
T ss_dssp HHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT----CCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred HHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcC----CCCcCcCCCCCcHHHHHHHcCCHHH
Confidence 77766446666777777777777777777777777776 5677777777777777777776444
No 13
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.92 E-value=9.1e-26 Score=201.41 Aligned_cols=164 Identities=15% Similarity=0.160 Sum_probs=139.9
Q ss_pred HHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCc-hhhhhhhccCCCCcHHHHHHHcCcHHHHH
Q 037143 15 AIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPST-YKKKNARRSRRKETPILVAAKMGVTEMVK 92 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~ 92 (382)
..+++++|+++ +.+.+. +..|+||||+|+ ..++.+++++|++.++ +. +..+..|.||||+|+..|+.++++
T Consensus 37 ~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~~~~~~---~~~~~~g~t~L~~A~~~~~~~~~~ 109 (223)
T 2f8y_A 37 RSDAAKRLLEA--SADANIQDNMGRTPLHAAV--SADAQGVFQILIRNRATDL---DARMHDGTTPLILAARLAVEGMLE 109 (223)
T ss_dssp CHHHHHHHHHT--TCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHBTTSCT---TCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred CHHHHHHHHHc--CCCCCCcCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCCc---ccCCCCCCcHHHHHHHhCcHHHHH
Confidence 37899999999 666654 556999999999 7799999999998775 33 667888999999999999999999
Q ss_pred HHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhH
Q 037143 93 KILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQ 172 (382)
Q Consensus 93 ~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~ 172 (382)
.|++.+++ ++..|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+||||+|+..|+.++++.
T Consensus 110 ~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~~~v~~-------- 176 (223)
T 2f8y_A 110 DLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNG----ANKDMQNNREETPLFLAAREGSYETAKV-------- 176 (223)
T ss_dssp HHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTCCCHHHHHHHHTCHHHHHH--------
T ss_pred HHHHcCCC-CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcC----CCCCCcCCCCcCHHHHHHHcCCHHHHHH--------
Confidence 99998877 6778999999999999999999999999998 7999999999999999999998665431
Q ss_pred HHHHHHHHHHhhccccccccccCCCCCccccchhhh
Q 037143 173 WEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTESH 208 (382)
Q Consensus 173 ~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~~ 208 (382)
.++.. .+.+.+|..|.||+++|.+..
T Consensus 177 -------Ll~~g---a~~~~~~~~g~t~l~~A~~~~ 202 (223)
T 2f8y_A 177 -------LLDHF---ANRDITDHMDRLPRDIAQERM 202 (223)
T ss_dssp -------HHHTT---CCTTCCCTTCCCHHHHHHHTT
T ss_pred -------HHHcC---CCCccccccCCCHHHHHHHhc
Confidence 22222 235688999999999997753
No 14
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.92 E-value=3.5e-26 Score=196.24 Aligned_cols=139 Identities=17% Similarity=0.119 Sum_probs=124.4
Q ss_pred HHHHHHHHHHcCCCCCCcccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHH
Q 037143 14 WAIQVLNELVDHRNPDQYKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKK 93 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~ 93 (382)
...++++.|+++++......|..|+||||+|+ ..++.+++++|++.+++. +..|..|+||||+|+..|+.+++++
T Consensus 13 g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~ 87 (172)
T 3v30_A 13 GELDQLKEHLRKGDNLVNKPDERGFTPLIWAS--AFGEIETVRFLLEWGADP---HILAKERESALSLASTGGYTDIVGL 87 (172)
T ss_dssp TCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHH--HTTCHHHHHHHHHHTCCT---TCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHHcCcccccCCCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCc---hhhcccCCCHHHHHHHCCCHHHHHH
Confidence 34689999999854434455677999999999 779999999999998776 7778899999999999999999999
Q ss_pred HhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcc
Q 037143 94 ILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPL 162 (382)
Q Consensus 94 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~ 162 (382)
|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.| ++++.+|.+|+||||+|+..|+.+++
T Consensus 88 Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~t~l~~A~~~~~~~~~ 151 (172)
T 3v30_A 88 LLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLARG----ADLTTEADSGYTPMDLAVALGYRKVQ 151 (172)
T ss_dssp HHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCccccCCCCCCHHHHHHHhCcHHHH
Confidence 9999887 6788999999999999999999999999998 79999999999999999999996654
No 15
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.92 E-value=5e-26 Score=203.64 Aligned_cols=169 Identities=17% Similarity=0.135 Sum_probs=140.5
Q ss_pred HHHHHHHHHcCCCCCCcccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHH
Q 037143 15 AIQVLNELVDHRNPDQYKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKI 94 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~L 94 (382)
..++++.|+++++......|.+|+||||+|+ ..++.+++++|++.+++.......+..|+||||+|+..|+.+++++|
T Consensus 14 ~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 91 (228)
T 2dzn_A 14 EFFKVQELLHSKPSLLLQKDQDGRIPLHWSV--SFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSL 91 (228)
T ss_dssp CHHHHHHHHHHCGGGTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHH
T ss_pred CHHHHHHHHhcCccccccCCCCCCCHHHHHH--HcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4689999999855544456777999999999 77999999999999844322232678899999999999999999999
Q ss_pred hhhC--CCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhH
Q 037143 95 LDTF--PVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQ 172 (382)
Q Consensus 95 l~~~--~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~ 172 (382)
++.+ ++ ++..|..|+||||+|+..|+.+++++|++.| ++++.+|.+|+||||+|+..|+.++++.
T Consensus 92 l~~g~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~~~v~~-------- 158 (228)
T 2dzn_A 92 YDRPLKPD-LNKITNQGVTCLHLAVGKKWFEVSQFLIENG----ASVRIKDKFNQIPLHRAASVGSLKLIEL-------- 158 (228)
T ss_dssp HSSSSCCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT----CCSCCCCTTSCCHHHHHHHTTCHHHHHH--------
T ss_pred HhCCCCcc-cccCCcCCCCHHHHHHHcCCHhHHHHHHHcC----CCccccCCCCCCHHHHHHHcCCHHHHHH--------
Confidence 9987 55 6778999999999999999999999999998 7999999999999999999998655421
Q ss_pred HHHHHHHHHHhhccccccccccCCCCCccccchhh
Q 037143 173 WEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 173 ~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~ 207 (382)
.++ ....+++.+|.+|.||+++|...
T Consensus 159 -------Ll~--~g~~~~~~~d~~g~t~L~~A~~~ 184 (228)
T 2dzn_A 159 -------LCG--LGKSAVNWQDKQGWTPLFHALAE 184 (228)
T ss_dssp -------HHT--TTCCCSCCCCTTSCCHHHHHHHT
T ss_pred -------HHh--cCcccccCcCCCCCCHHHHHHHc
Confidence 111 12244678999999999998765
No 16
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.92 E-value=1.5e-25 Score=201.79 Aligned_cols=183 Identities=19% Similarity=0.169 Sum_probs=134.6
Q ss_pred HHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHH
Q 037143 15 AIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKK 93 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~ 93 (382)
..+++++|+++ +.+.+. +..|+||||+|+ ..++.+++++|++.+++. +..+..|.||||+|+..|+.+++++
T Consensus 23 ~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~~~~ 95 (237)
T 3b7b_A 23 HVDICHMLVQA--GANIDTCSEDQRTPLMEAA--ENNHLEAVKYLIKAGALV---DPKDAEGSTCLHLAAKKGHYEVVQY 95 (237)
T ss_dssp CHHHHHHHHHT--TCCTTCCCTTCCCHHHHHH--HTTCHHHHHHHHTTTCCC---CCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHc--CCCcCccCCCCCCHHHHHH--HhCCHHHHHHHHhCCCCC---CCCCCCCCcHHHHHHHcCCHHHHHH
Confidence 46788999988 555554 455999999998 678889999999888765 6667788999999999999999999
Q ss_pred HhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcccc---Cc----
Q 037143 94 ILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLF---PG---- 166 (382)
Q Consensus 94 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~---~~---- 166 (382)
|++.++..++..|..|+||||+|+..|+.+++++|++.| .+++.+|.+|+||||+|+..|+.++++. .|
T Consensus 96 Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 171 (237)
T 3b7b_A 96 LLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKG----SDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLH 171 (237)
T ss_dssp HHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTT
T ss_pred HHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC----CCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC
Confidence 998876557778888999999999999999999999888 6888888889999999988888666542 11
Q ss_pred -------chhhhHHHHHHHHHHHhhc-cccccccccCCCCCccccchhhh
Q 037143 167 -------AALQVQWEIKWFQHVKKLM-PRHFFTRYNDDGKTPDEVFTESH 208 (382)
Q Consensus 167 -------~~l~~~~~~~~~~~v~~~~-~~~~~~~~N~~G~Tpldla~~~~ 208 (382)
.++.........+.++... .+.+++.+|++|+||+++|....
T Consensus 172 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~ 221 (237)
T 3b7b_A 172 AVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNS 221 (237)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTC
T ss_pred CcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHH
Confidence 1122111111111222211 23346678888888888887654
No 17
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.92 E-value=4e-26 Score=208.54 Aligned_cols=175 Identities=13% Similarity=0.011 Sum_probs=131.5
Q ss_pred HHHHHHHcCCCCCCccc-----ccCCCCCcccccccCC---CcccccccCCCCCchhhhhh--------hccCCCCcHHH
Q 037143 17 QVLNELVDHRNPDQYKY-----VYNGQDPRISTFGQDV---NAFTARETPLDPSTYKKKNA--------RRSRRKETPIL 80 (382)
Q Consensus 17 eiv~~Ll~~~~~~~~~~-----~~~G~TPLh~A~~~~~---~~~~~v~~Ll~~~~~~~~~~--------~~~~~g~tpLh 80 (382)
+++++|+++ +.+.+. |.+|+||||+|+ .. ++.+++++|++.+++....+ ..|..|+||||
T Consensus 20 ~ll~~l~~~--g~~i~~~~~~~d~~g~t~L~~A~--~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~ 95 (256)
T 2etb_A 20 GLLEYLRWN--SKYLTDSAYTEGSTGKTCLMKAV--LNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALH 95 (256)
T ss_dssp THHHHHHHH--TCCTTSGGGSBTTTTBCHHHHHH--HTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHH
T ss_pred HHHHHHHHc--CCCcccccccCCCCCCCHHHHHH--HccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHH
Confidence 477888888 666554 667999999999 66 99999999999876541111 23467999999
Q ss_pred HHHHcCcHHHHHHHhhhCCCCccccCCC-------------CCcHHHHHHHcCCHHHHHHHHh---CCCccccccccccC
Q 037143 81 VAAKMGVTEMVKKILDTFPVAMWDLDPA-------------EKNILLLAIENRRTSVYNLLLS---RKALGQTIFWQVDN 144 (382)
Q Consensus 81 ~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~-------------G~t~Lh~A~~~g~~~iv~~Ll~---~~~~~~~~~~~~D~ 144 (382)
+|+..|+.+++++|++.+++ ++.+|.. |+||||+|+..|+.+++++|++ .| +++|.+|.
T Consensus 96 ~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~g----a~~n~~d~ 170 (256)
T 2etb_A 96 IAIEKRSLQCVKLLVENGAD-VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQP----ASLEATDS 170 (256)
T ss_dssp HHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC----CCTTCCCT
T ss_pred HHHHcCCHHHHHHHHHcCCC-CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC----CCcCccCC
Confidence 99999999999999999887 5667765 9999999999999999999999 77 79999999
Q ss_pred CCCCHHHHHHhhC--CCCccccCcchhhhHHHHHHHHHHHhhccc----cccccccCCCCCccccchhhh
Q 037143 145 QGNSALHLAAKYG--DHLPLLFPGAALQVQWEIKWFQHVKKLMPR----HFFTRYNDDGKTPDEVFTESH 208 (382)
Q Consensus 145 ~G~TpLH~A~~~g--~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~----~~~~~~N~~G~Tpldla~~~~ 208 (382)
+|+||||+|+..+ +.+...+ ...-+++ .++..... ...+.+|++|.||+++|.+..
T Consensus 171 ~g~TpLh~A~~~~~~~~~~~~~------~~~iv~~--Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g 232 (256)
T 2etb_A 171 LGNTVLHALVMIADNSPENSAL------VIHMYDG--LLQMGARLCPTVQLEEISNHQGLTPLKLAAKEG 232 (256)
T ss_dssp TSCCHHHHHHHHCCSCHHHHHH------HHHHHHH--HHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcccCCchhhHH------HHHHHHH--HHHcCCCcccccccccccCCCCCCHHHHHHHhC
Confidence 9999999999944 4320000 0000011 11111111 112689999999999998763
No 18
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.92 E-value=6.2e-26 Score=191.11 Aligned_cols=137 Identities=17% Similarity=0.171 Sum_probs=124.7
Q ss_pred HHHHHHHHHHcCCCCCCcccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHH
Q 037143 14 WAIQVLNELVDHRNPDQYKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKK 93 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~ 93 (382)
...+++++|+++ +.+.+.+..|+||||+|+ ..++.+++++|++.+++. +..|..|+||||+|+..|+.+++++
T Consensus 13 g~~~~v~~Ll~~--g~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~ 85 (153)
T 1awc_B 13 GQDDEVRILMAN--GAPFTTDWLGTSPLHLAA--QYGHFSTTEVLLRAGVSR---DARTKVDRTPLHMAASEGHANIVEV 85 (153)
T ss_dssp TCHHHHHHHHHH--TCCCCCCTTCCCHHHHHH--HHTCHHHHHHHHTTTCCT---TCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred CCHHHHHHHHHc--CCCCCcCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCC---CCCCCCCCCHHHHHHHcChHHHHHH
Confidence 457899999999 566667777999999999 779999999999998876 7778899999999999999999999
Q ss_pred HhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcc
Q 037143 94 ILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPL 162 (382)
Q Consensus 94 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~ 162 (382)
|++.+++ ++.+|..|+||||+|+..|+.+++++|++.| ++++.+|.+|+||||+|+..|+.+++
T Consensus 86 Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~t~l~~A~~~~~~~i~ 149 (153)
T 1awc_B 86 LLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYG----ADVHTQSKFCKTAFDISIDNGNEDLA 149 (153)
T ss_dssp HHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCccccCCCCCCHHHHHHHcCCHHHH
Confidence 9999887 6788999999999999999999999999998 79999999999999999999986554
No 19
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.92 E-value=1.6e-25 Score=201.87 Aligned_cols=166 Identities=17% Similarity=0.086 Sum_probs=90.3
Q ss_pred ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCC---CccccCCCCC
Q 037143 34 VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPV---AMWDLDPAEK 110 (382)
Q Consensus 34 ~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~---~~~~~d~~G~ 110 (382)
|..|+||||+|+ ..++.+++++|++.+++. +..|..|.||||+|+..|+.++++.|++.++. .++..|..|+
T Consensus 43 ~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~ 117 (241)
T 1k1a_A 43 NNLRQTPLHLAV--ITTLPSVVRLLVTAGASP---MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGL 117 (241)
T ss_dssp CTTSCCHHHHHH--HTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSC
T ss_pred cccCCCHHHHHH--HcCCHHHHHHHHHcCCCc---cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCC
Confidence 334666666666 456666666666665544 44455566666666666666666666665541 2444555666
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCcccccccccc-CCCCCHHHHHHhhCCCCcccc---Cc-----------chhhhHHHH
Q 037143 111 NILLLAIENRRTSVYNLLLSRKALGQTIFWQVD-NQGNSALHLAAKYGDHLPLLF---PG-----------AALQVQWEI 175 (382)
Q Consensus 111 t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D-~~G~TpLH~A~~~g~~~~~~~---~~-----------~~l~~~~~~ 175 (382)
||||+|+..|+.+++++|++.+ .+++.+| .+|+||||+|+..|+.++++. .| .++......
T Consensus 118 t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 193 (241)
T 1k1a_A 118 TALHVAVNTECQETVQLLLERG----ADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGR 193 (241)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTT----CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcC----CCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 6666666666666666666655 4555555 556666666666555444331 01 111111111
Q ss_pred HHHHHHHhhc-cccccccccCCCCCccccchhhh
Q 037143 176 KWFQHVKKLM-PRHFFTRYNDDGKTPDEVFTESH 208 (382)
Q Consensus 176 ~~~~~v~~~~-~~~~~~~~N~~G~Tpldla~~~~ 208 (382)
...+.++..+ .+.+++.+|++|+||+++|.+..
T Consensus 194 ~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 227 (241)
T 1k1a_A 194 GLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRR 227 (241)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHH
T ss_pred CCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcC
Confidence 1111111111 22346788999999999987653
No 20
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.92 E-value=8.1e-26 Score=197.59 Aligned_cols=148 Identities=14% Similarity=0.060 Sum_probs=128.8
Q ss_pred cccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcH
Q 037143 33 YVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNI 112 (382)
Q Consensus 33 ~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~ 112 (382)
.|..|+||||+|+ ..++.+++++|++.+++. +..|..|+||||+|+..|+.+++++|++.+++ ++..|..|+||
T Consensus 31 ~d~~g~t~L~~A~--~~g~~~~v~~Ll~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 104 (192)
T 2rfm_A 31 RDSYNRTPLMVAC--MLGMENAIDKLVENFDKL---EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-VNTKDFSGKTP 104 (192)
T ss_dssp CCTTCCCHHHHHH--HHTCGGGHHHHHHHHCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTSCCH
T ss_pred cCCCCCCHHHHHH--HcCCHHHHHHHHHhcccc---ccccccCccHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcH
Confidence 4667999999999 779999999999987665 67788899999999999999999999999887 67789999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhcccccccc
Q 037143 113 LLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTR 192 (382)
Q Consensus 113 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~ 192 (382)
||+|+..|+.+++++|++.+ ++++.+|.+|+||||+|+..|+.++++. .++. +..++.
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------Ll~~---ga~~~~ 162 (192)
T 2rfm_A 105 LMWSIIFGYSEMSYFLLEHG----ANVNDRNLEGETPLIVASKYGRSEIVKK---------------LLEL---GADISA 162 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTT----CCSSCCCTTCCCHHHHHHHHTCHHHHHH---------------HHHT---TCCTTC
T ss_pred HHHHHHcCCHHHHHHHHHCC----CCCCCCCCCCCCHHHHHHHcCCHHHHHH---------------HHHC---CCCCCC
Confidence 99999999999999999998 7999999999999999999998665421 1222 234668
Q ss_pred ccCCCCCccccchhhh
Q 037143 193 YNDDGKTPDEVFTESH 208 (382)
Q Consensus 193 ~N~~G~Tpldla~~~~ 208 (382)
+|.+|.||+++|....
T Consensus 163 ~~~~g~t~l~~A~~~~ 178 (192)
T 2rfm_A 163 RDLTGLTAEASARIFG 178 (192)
T ss_dssp BCTTSCBHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHhC
Confidence 9999999999997653
No 21
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.92 E-value=1.7e-25 Score=205.43 Aligned_cols=180 Identities=14% Similarity=0.024 Sum_probs=138.3
Q ss_pred HHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHH
Q 037143 15 AIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKK 93 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~ 93 (382)
..+++++|+++ +.+.+. |.+|+||||+|+ ..++.+++++|++.+++. +..|..|+||||+|+..|+.+++++
T Consensus 15 ~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~ 87 (261)
T 2xai_A 15 HQLSLRNLISQ--GWAVNIITADHVSPLHEAC--LGGHLSCVKILLKHGAQV---NGVTADWHTPLFNACVSGSWDCVNL 87 (261)
T ss_dssp CHHHHHHHHHT--TCCSSCCCTTCCCHHHHHH--HHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred CHHHHHHHHHC--CCCCCCcCCCCCCHHHHHH--HcCCHHHHHHHHHCCCCC---CCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 46899999998 555554 556999999999 779999999999988776 7778889999999999999999999
Q ss_pred HhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcccc---Cc----
Q 037143 94 ILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLF---PG---- 166 (382)
Q Consensus 94 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~---~~---- 166 (382)
|++.+++. + .+.+|+||||+|+..|+.+++++|++.+ ++++.+|.+|+||||+|+..|+.++++. .|
T Consensus 88 Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 161 (261)
T 2xai_A 88 LLQHGASV-Q-PESDLASPIHEAARRGHVECVNSLIAYG----GNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN 161 (261)
T ss_dssp HHHTTCCS-S-CSCTTCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred HHHCCCCC-C-CCCCCCCHHHHHHHcCcHHHHHHHHHcC----CCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 99988773 3 3567999999999999999999999998 7899999999999999999998776542 11
Q ss_pred ------chhhhHHHHHHHHHHHhhc-cccccccccCCCCCccccchhh
Q 037143 167 ------AALQVQWEIKWFQHVKKLM-PRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 167 ------~~l~~~~~~~~~~~v~~~~-~~~~~~~~N~~G~Tpldla~~~ 207 (382)
.++.........+.++... .+.+++.+|++|+||+++|.+.
T Consensus 162 ~~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~ 209 (261)
T 2xai_A 162 QGKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPE 209 (261)
T ss_dssp CCBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT
T ss_pred CCCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccc
Confidence 1222211111112222211 2344678999999999998754
No 22
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.92 E-value=3.5e-26 Score=217.33 Aligned_cols=169 Identities=13% Similarity=0.054 Sum_probs=137.7
Q ss_pred HHHHHHHHHHcCCCCCCccc--ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCc---H
Q 037143 14 WAIQVLNELVDHRNPDQYKY--VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGV---T 88 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~~--~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~---~ 88 (382)
...+++++|+++ +.+.+. |.+|+||||+|+ ..++.+++++|++.|++. +.+|..|+||||+|+..|+ .
T Consensus 108 ~~~~~~~~l~~~--g~dvn~~~d~~g~TpLh~Aa--~~g~~~~v~~Ll~~Gad~---n~~d~~g~TpLh~A~~~g~~~~~ 180 (327)
T 1sw6_A 108 LLQEVNDAFPNT--QLNLNIPVDEHGNTPLHWLT--SIANLELVKHLVKHGSNR---LYGDNMGESCLVKAVKSVNNYDS 180 (327)
T ss_dssp HHHHHHHHCTTS--CCCSCSCCSTTCCCHHHHHH--HTTCHHHHHHHHHTTCCT---TBCCTTCCCHHHHHHHSSHHHHT
T ss_pred hHHHHHHHHHhc--CCCcccccCCCCCcHHHHHH--HcCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHhcccccH
Confidence 345788888888 666665 566999999999 789999999999999887 7889999999999999999 6
Q ss_pred HHHHHHhhhCCCCccccCCCCCcHHHHHHH----cCCHHHHHHHHhCCCcc-----------------------------
Q 037143 89 EMVKKILDTFPVAMWDLDPAEKNILLLAIE----NRRTSVYNLLLSRKALG----------------------------- 135 (382)
Q Consensus 89 ~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~----~g~~~iv~~Ll~~~~~~----------------------------- 135 (382)
++++.|++.....++.+|..|+||||+|+. .|+.+++++|++.+...
T Consensus 181 ~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t 260 (327)
T 1sw6_A 181 GTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKD 260 (327)
T ss_dssp TCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------C
T ss_pred HHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCC
Confidence 888888887644578899999999999999 89999999998763100
Q ss_pred ------------ccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccccCCCCCcccc
Q 037143 136 ------------QTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYNDDGKTPDEV 203 (382)
Q Consensus 136 ------------~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldl 203 (382)
+.++|.+|.+|+||||+|+..|+.+++++ .++. +.+++.+|++|+||+++
T Consensus 261 ~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~---------------Ll~~---Gad~~~~d~~G~TpL~~ 322 (327)
T 1sw6_A 261 SILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDA---------------LLDY---GADPFIANKSGLRPVDF 322 (327)
T ss_dssp HHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHH---------------HHHT---TCCTTCCCTTSCCGGGG
T ss_pred hhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHH---------------HHHc---CCCCcccCCCCCCHHHH
Confidence 00588899999999999999999666432 2222 33467999999999999
Q ss_pred chhh
Q 037143 204 FTES 207 (382)
Q Consensus 204 a~~~ 207 (382)
|.+.
T Consensus 323 A~~~ 326 (327)
T 1sw6_A 323 GAGL 326 (327)
T ss_dssp TCC-
T ss_pred HHhc
Confidence 8753
No 23
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.92 E-value=8.3e-26 Score=202.75 Aligned_cols=166 Identities=16% Similarity=0.080 Sum_probs=142.1
Q ss_pred HHHHHHHHHHcCCCCCCcccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHH
Q 037143 14 WAIQVLNELVDHRNPDQYKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKK 93 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~ 93 (382)
...++++.|++.++......|..|+||||+|+ ..++.+++++|++.+.+. +..|..|+||||+|+..|+.+++++
T Consensus 17 g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~ 91 (231)
T 3aji_A 17 GKLDELKERILADKSLATRTDQDSRTALHWAC--SAGHTEIVEFLLQLGVPV---NDKDDAGWSPLHIAASAGXDEIVKA 91 (231)
T ss_dssp TCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHH--HHTCHHHHHHHHHTTCCS---CCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred CCHHHHHHHHHhchhhhhcCCCCCCCHHHHHH--HcCcHHHHHHHHHhCCCC---CCcCCCCCCHHHHHHHcCHHHHHHH
Confidence 45789999998855554556777999999999 779999999999998776 7778899999999999999999999
Q ss_pred HhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHH
Q 037143 94 ILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQW 173 (382)
Q Consensus 94 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~ 173 (382)
|++.+++ ++.+|..|+||||+|+..|+.+++++|++.+ .+++.+|..|+||||+|+..|+.++++.
T Consensus 92 Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~~~v~~--------- 157 (231)
T 3aji_A 92 LLVKGAH-VNAVNQNGCTPLHYAASKNRHEIAVMLLEGG----ANPDAKDHYDATAMHRAAAKGNLKMVHI--------- 157 (231)
T ss_dssp HHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHHTCHHHHHH---------
T ss_pred HHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCCcCCCCCcHHHHHHHcCCHHHHHH---------
Confidence 9999887 6778999999999999999999999999998 7899999999999999999998655421
Q ss_pred HHHHHHHHHhhccccccccccCCCCCccccchhh
Q 037143 174 EIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 174 ~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~ 207 (382)
.++ .+.+++.+|.+|.||+++|...
T Consensus 158 ------Ll~---~g~~~~~~~~~g~t~L~~A~~~ 182 (231)
T 3aji_A 158 ------LLF---YKASTNIQDTEGNTPLHLACDE 182 (231)
T ss_dssp ------HHH---TTCCSCCCCTTSCCHHHHHHHT
T ss_pred ------HHh---cCCCccccCCCCCCHHHHHHHC
Confidence 122 2234678899999999998765
No 24
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.92 E-value=7e-26 Score=204.38 Aligned_cols=165 Identities=18% Similarity=0.105 Sum_probs=135.0
Q ss_pred HHHHHHHHcCCCC--CCcc-cccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHH
Q 037143 16 IQVLNELVDHRNP--DQYK-YVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVK 92 (382)
Q Consensus 16 ~eiv~~Ll~~~~~--~~~~-~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~ 92 (382)
.++++.|++..+. .+.+ .+..|+||||+|+ ..++.+++++|++.|++. +..|..|+||||+|+..|+.++++
T Consensus 21 ~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~ 95 (236)
T 1ikn_D 21 KALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAV--ITNQPEIAEALLGAGCDP---ELRDFRGNTPLHLACEQGCLASVG 95 (236)
T ss_dssp SSSSSCCCC-----CCCCCCCCTTCCCHHHHHH--HTTCHHHHHCCCSCCCCS---CCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred hhHHHHHHHHhhccHHHhhccCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHcCCHHHHH
Confidence 4667788877432 2344 4556999999999 779999999999998876 777889999999999999999999
Q ss_pred HHhhhCCC-----CccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccC-CCCCHHHHHHhhCCCCccccCc
Q 037143 93 KILDTFPV-----AMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDN-QGNSALHLAAKYGDHLPLLFPG 166 (382)
Q Consensus 93 ~Ll~~~~~-----~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~-~G~TpLH~A~~~g~~~~~~~~~ 166 (382)
+|++.+++ ..+..|..|+||||+|+..|+.+++++|++.| ++++.+|. +|+||||+|+..|+.++++.
T Consensus 96 ~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~~g~tpL~~A~~~~~~~~v~~-- 169 (236)
T 1ikn_D 96 VLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLG----ADVNAQEPCNGRTALHLAVDLQNPDLVSL-- 169 (236)
T ss_dssp HHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHT----CCTTCCCTTTCCCHHHHHHHTTCHHHHHH--
T ss_pred HHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCCCCCCCCCCHHHHHHHcCCHHHHHH--
Confidence 99998753 35667889999999999999999999999998 79999998 99999999999998665431
Q ss_pred chhhhHHHHHHHHHHHhhccccccccccCCCCCccccchhh
Q 037143 167 AALQVQWEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 167 ~~l~~~~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~ 207 (382)
.++. +.+++.+|..|.||+++|...
T Consensus 170 -------------Ll~~---ga~~~~~~~~g~tpl~~A~~~ 194 (236)
T 1ikn_D 170 -------------LLKC---GADVNRVTYQGYSPYQLTWGR 194 (236)
T ss_dssp -------------HHTT---TCCSCCCCTTCCCGGGGCTTS
T ss_pred -------------HHHc---CCCCCcccCCCCCHHHHHHcc
Confidence 1222 334678999999999999765
No 25
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.92 E-value=3e-25 Score=210.74 Aligned_cols=91 Identities=19% Similarity=0.105 Sum_probs=45.1
Q ss_pred ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHH
Q 037143 34 VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNIL 113 (382)
Q Consensus 34 ~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~L 113 (382)
|..|+||||+|+ ..++.+++++|++.+++. +..|..|+||||+|+..|+.+++++|++.+++ ++..|..|+|||
T Consensus 55 d~~g~t~L~~A~--~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~-~~~~~~~g~t~L 128 (351)
T 3utm_A 55 DGRKSTPLHLAA--GYNRVRIVQLLLQHGADV---HAKDKGGLVPLHNACSYGHYEVTELLLKHGAC-VNAMDLWQFTPL 128 (351)
T ss_dssp STTCCCHHHHHH--HTTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHH
T ss_pred CCCCCCHHHHHH--HcCCHHHHHHHHHcCCCC---CccCCCCCcHHHHHHHCCCHHHHHHHHHCCCC-CCCCCCCCCCHH
Confidence 333555555555 345555555555544443 44444455555555555555555555554443 334444555555
Q ss_pred HHHHHcCCHHHHHHHHh
Q 037143 114 LLAIENRRTSVYNLLLS 130 (382)
Q Consensus 114 h~A~~~g~~~iv~~Ll~ 130 (382)
|+|+..|+.+++++|++
T Consensus 129 ~~A~~~~~~~~v~~Ll~ 145 (351)
T 3utm_A 129 HEAASKNRVEVCSLLLS 145 (351)
T ss_dssp HHHHHTTCHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHH
Confidence 55555555555554444
No 26
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.92 E-value=5.5e-26 Score=209.58 Aligned_cols=166 Identities=15% Similarity=0.057 Sum_probs=137.6
Q ss_pred HHHHHHHHHcCCCCCC-cc-cccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHH
Q 037143 15 AIQVLNELVDHRNPDQ-YK-YVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVK 92 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~-~~-~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~ 92 (382)
..+++++|++++.... .+ .+..|+||||+|+ ..++.+++++|++.|++. +..|..|+||||+|+..|+.++++
T Consensus 21 ~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~ga~~---~~~~~~g~tpL~~A~~~~~~~~v~ 95 (282)
T 1oy3_D 21 HEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAA--ILGEASTVEKLYAAGAGV---LVAERGGHTALHLACRVRAHTCAC 95 (282)
T ss_dssp CHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHH--HHTCHHHHHHHHHTTCCS---SCCCTTSCCHHHHHTTTTCHHHHH
T ss_pred CHHHHHHHHhcCCCcccccccCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCC---CCCCCCCCCHHHHHHHcCCcchhH
Confidence 4689999998843321 33 4556999999999 779999999999999876 777889999999999999999999
Q ss_pred HHhhhCCC----------------------------------------------CccccCCCCCcHHHHHHHcCCHHHHH
Q 037143 93 KILDTFPV----------------------------------------------AMWDLDPAEKNILLLAIENRRTSVYN 126 (382)
Q Consensus 93 ~Ll~~~~~----------------------------------------------~~~~~d~~G~t~Lh~A~~~g~~~iv~ 126 (382)
+|++.+++ .++.+|..|+||||+|+..|+.++++
T Consensus 96 ~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 175 (282)
T 1oy3_D 96 VLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVR 175 (282)
T ss_dssp HHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred hhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHH
Confidence 99987643 14567889999999999999999999
Q ss_pred HHHhCCCccccccccccCC-CCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccccCCCCCccccch
Q 037143 127 LLLSRKALGQTIFWQVDNQ-GNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFT 205 (382)
Q Consensus 127 ~Ll~~~~~~~~~~~~~D~~-G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~ 205 (382)
+|++.| ++++.+|.. |+||||+|+..|+.+++++ .++. +.+++.+|.+|.||+++|.
T Consensus 176 ~Ll~~g----~~~~~~~~~~g~tpL~~A~~~~~~~~v~~---------------Ll~~---gad~~~~d~~g~tpL~~A~ 233 (282)
T 1oy3_D 176 LLRDAG----ADLNKPEPTCGRTPLHLAVEAQAASVLEL---------------LLKA---GADPTARMYGGRTPLGSAL 233 (282)
T ss_dssp HHHHHT----CCTTCCCTTTCCCHHHHHHHTTCHHHHHH---------------HHHT---TCCTTCCCTTSCCHHHHHH
T ss_pred HHHHcC----CCCCCCCCCCCcCHHHHHHHcCCHHHHHH---------------HHHc---CCCCcccccCCCCHHHHHH
Confidence 999998 789999865 9999999999998665432 2222 3346789999999999997
Q ss_pred hh
Q 037143 206 ES 207 (382)
Q Consensus 206 ~~ 207 (382)
..
T Consensus 234 ~~ 235 (282)
T 1oy3_D 234 LR 235 (282)
T ss_dssp TS
T ss_pred Hc
Confidence 65
No 27
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.91 E-value=2e-25 Score=190.59 Aligned_cols=144 Identities=15% Similarity=0.051 Sum_probs=110.8
Q ss_pred CCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHHH
Q 037143 36 NGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILLL 115 (382)
Q Consensus 36 ~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~ 115 (382)
.|.||||.|+ ..|+.++++.|++.+.+. +..|..|.||||+|+..|+.+++++|++.+.+ ++..|..|+||||+
T Consensus 2 ~~~t~L~~A~--~~g~~~~v~~ll~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 75 (167)
T 3v31_A 2 ANSLSVHQLA--AQGEMLYLATRIEQENVI---NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-PQLLGKGRESALSL 75 (167)
T ss_dssp TTCCCHHHHH--HTTCHHHHHHHHHHSSCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHH
T ss_pred CCcchHHHHH--HCCCHHHHHHHHHcCCCc---CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCCcHHHH
Confidence 4788888888 678888888888777654 66777888888888888888888888888766 56678888888888
Q ss_pred HHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccccC
Q 037143 116 AIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYND 195 (382)
Q Consensus 116 A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~ 195 (382)
|+..|+.+++++|++.+ ++++.+|.+|+||||+|+..|+.++++. .++. +.+++.+|.
T Consensus 76 A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------Ll~~---g~~~~~~~~ 133 (167)
T 3v31_A 76 ACSKGYTDIVKMLLDCG----VDVNEYDWNGGTPLLYAVHGNHVKCVKM---------------LLES---GADPTIETD 133 (167)
T ss_dssp HHHHTCHHHHHHHHHHT----CCTTCCCTTSCCHHHHHHHTTCHHHHHH---------------HHHT---TCCTTCCCT
T ss_pred HHHcCCHHHHHHHHHCC----CCCCcCCCCCCCHHHHHHHcCCHHHHHH---------------HHHc---CCCCCCcCC
Confidence 88888888888888887 6888888888888888888887554321 1221 233457788
Q ss_pred CCCCccccchhh
Q 037143 196 DGKTPDEVFTES 207 (382)
Q Consensus 196 ~G~Tpldla~~~ 207 (382)
+|.||+++|...
T Consensus 134 ~g~t~l~~A~~~ 145 (167)
T 3v31_A 134 SGYNSMDLAVAL 145 (167)
T ss_dssp TSCCHHHHHHHH
T ss_pred CCCCHHHHHHHc
Confidence 888888888665
No 28
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.91 E-value=3.3e-25 Score=199.66 Aligned_cols=166 Identities=17% Similarity=0.126 Sum_probs=131.6
Q ss_pred cccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcH
Q 037143 33 YVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNI 112 (382)
Q Consensus 33 ~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~ 112 (382)
.|.+|+||||+|+ ..|+.+++++|++.+.+. +..+..|.||||+|+..|+.+++++|++.+.+ ++..|..|+||
T Consensus 7 ~~~~g~t~L~~A~--~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~ 80 (237)
T 3b7b_A 7 EHQNKRSPLHAAA--EAGHVDICHMLVQAGANI---DTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL-VDPKDAEGSTC 80 (237)
T ss_dssp SSCCSCCHHHHHH--HHTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-CCCCCTTSCCH
T ss_pred ccCCCCCHHHHHH--HcCcHHHHHHHHHcCCCc---CccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC-CCCCCCCCCcH
Confidence 4556999999999 779999999999998876 77788999999999999999999999998877 67789999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcccc---Ccc-----------hhhhHHHHHHH
Q 037143 113 LLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLF---PGA-----------ALQVQWEIKWF 178 (382)
Q Consensus 113 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~---~~~-----------~l~~~~~~~~~ 178 (382)
||+|+..|+.+++++|++.+. .+++.+|..|.||||+|+..|+.++++. .|+ ++.........
T Consensus 81 L~~A~~~~~~~~~~~Ll~~~~---~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 157 (237)
T 3b7b_A 81 LHLAAKKGHYEVVQYLLSNGQ---MDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCV 157 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTTTC---CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCH
T ss_pred HHHHHHcCCHHHHHHHHhCCC---CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCH
Confidence 999999999999999999983 6899999999999999999999776542 111 22221111112
Q ss_pred HHHHhhc-cccccccccCCCCCccccchhh
Q 037143 179 QHVKKLM-PRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 179 ~~v~~~~-~~~~~~~~N~~G~Tpldla~~~ 207 (382)
+.++... ...+++.+|.+|.||+++|...
T Consensus 158 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 187 (237)
T 3b7b_A 158 DIAEILLAAKCDLHAVNIHGDSPLHIAARE 187 (237)
T ss_dssp HHHHHHHTTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHh
Confidence 2222222 2234677888999999988765
No 29
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.91 E-value=1.8e-25 Score=190.48 Aligned_cols=153 Identities=17% Similarity=0.108 Sum_probs=127.6
Q ss_pred ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHH
Q 037143 34 VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNIL 113 (382)
Q Consensus 34 ~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~L 113 (382)
+++|.||||.|+ ..++.++++.|++.+.. ..+..+..|+||||+|+..|+.+++++|++.+.+ ++.+|.+|+|||
T Consensus 5 ~~~~~~~l~~A~--~~g~~~~v~~ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L 79 (165)
T 3twr_A 5 NSEADRQLLEAA--KAGDVETVKKLCTVQSV--NCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD-VHAKDKGGLVPL 79 (165)
T ss_dssp -CHHHHHHHHHH--HHTCHHHHHHHCCTTTT--TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred cchhhHHHHHHH--HhCCHHHHHHHHHcCCC--CccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-CCccCCCCCCHH
Confidence 455899999999 78999999999986432 2255677899999999999999999999999877 678899999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccc
Q 037143 114 LLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRY 193 (382)
Q Consensus 114 h~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~ 193 (382)
|+|+..|+.+++++|++.+ ++++.+|.+|+||||+|+..|+.++++. .++. ..+++.+
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------Ll~~---ga~~~~~ 137 (165)
T 3twr_A 80 HNACSYGHYEVAELLVKHG----AVVNVADLWKFTPLHEAAAKGKYEICKL---------------LLQH---GADPTKK 137 (165)
T ss_dssp HHHHHTTCHHHHHHHHHTT----CCTTCCCTTCCCHHHHHHHTTCHHHHHH---------------HHHT---TCCTTCC
T ss_pred HHHHHcCcHHHHHHHHhCC----CCCCCcCCCCCCHHHHHHHcCCHHHHHH---------------HHHc---CCCCccc
Confidence 9999999999999999998 7999999999999999999998665421 1222 2345689
Q ss_pred cCCCCCccccchhhhHHHHH
Q 037143 194 NDDGKTPDEVFTESHRDLVK 213 (382)
Q Consensus 194 N~~G~Tpldla~~~~~~l~~ 213 (382)
|.+|.||+++|.+.+.++++
T Consensus 138 ~~~g~t~l~~a~~~~~~i~~ 157 (165)
T 3twr_A 138 NRDGNTPLDLVKDGDTDIQD 157 (165)
T ss_dssp CTTSCCTGGGSCTTCHHHHH
T ss_pred CCCCCChhHhHhcCChHHHH
Confidence 99999999999887766544
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.91 E-value=1.8e-24 Score=200.05 Aligned_cols=166 Identities=16% Similarity=0.074 Sum_probs=117.1
Q ss_pred HHHHHHHHHcCCCCC-------CcccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCc
Q 037143 15 AIQVLNELVDHRNPD-------QYKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGV 87 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~-------~~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~ 87 (382)
.+++|++||+++... ....+..|.||||.|+. ..+...++++|++.|++. +..|.+|+||||+||..|+
T Consensus 23 ~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~-~~~~~~~v~~Ll~~Gadv---n~~d~~G~TpLh~A~~~g~ 98 (269)
T 4b93_B 23 DLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPK-CAPAQKRLAKVPASGLGV---NVTSQDGSSPLHVAALHGR 98 (269)
T ss_dssp CHHHHHHHHTCC-----------------------------------------CCCCT---TCCCTTSCCHHHHHHHTTC
T ss_pred CHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHH-hCCHHHHHHHHHHCCCCC---CCcCCCCCCHHHHHHHcCc
Confidence 478999999984322 12234559999999984 223345789999999877 8889999999999999999
Q ss_pred HHHHHHHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcc
Q 037143 88 TEMVKKILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGA 167 (382)
Q Consensus 88 ~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~ 167 (382)
.+++++|++.+++ ++..+.+|.||+|+|+..++.+++++|++.+ +++|.+|.+|+||||+|+..|+.+++++
T Consensus 99 ~~~v~~Ll~~~a~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g----~~~n~~d~~g~TpL~~A~~~g~~~~v~~--- 170 (269)
T 4b93_B 99 ADLIPLLLKHGAN-AGARNADQAVPLHLACQQGHFQVVKCLLDSN----AKPNKKDLSGNTPLIYACSGGHHELVAL--- 170 (269)
T ss_dssp TTHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT----CCSCCCCTTCCCHHHHHHHTTCGGGHHH---
T ss_pred HHHHHHHHhcCCC-cCccCCCCCCccccccccChHHHHHHHHHCC----CCCCCCCCCCCCHHHHHHHCCCHHHHHH---
Confidence 9999999999887 6778999999999999999999999999998 7999999999999999999999777532
Q ss_pred hhhhHHHHHHHHHHHhhccccccccccCCCCCccccchhh
Q 037143 168 ALQVQWEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 168 ~l~~~~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~ 207 (382)
.++. +.+++.+|.+|.||+++|...
T Consensus 171 ------------Ll~~---gadvn~~~~~g~t~Lh~A~~~ 195 (269)
T 4b93_B 171 ------------LLQH---GASINASNNKGNTALHEAVIE 195 (269)
T ss_dssp ------------HHHT---TCCTTCBCTTSCBHHHHHHHT
T ss_pred ------------HHHC---CCCCCccccCCCcHHHHHHHc
Confidence 2222 234678999999999998765
No 31
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.91 E-value=7.4e-25 Score=203.99 Aligned_cols=180 Identities=14% Similarity=0.028 Sum_probs=137.3
Q ss_pred HHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHH
Q 037143 15 AIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKK 93 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~ 93 (382)
..+++++|+++ +.+.+. |.+|+||||+|+ ..++.+++++|++.+++. +..|..|+||||+|+..|+.+++++
T Consensus 71 ~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~ga~~---~~~~~~g~t~L~~A~~~~~~~~v~~ 143 (285)
T 3d9h_A 71 HQLSLRNLISQ--GWAVNIITADHVSPLHEAC--LGGHLSCVKILLKHGAQV---NGVTADWHTPLFNACVSGSWDCVNL 143 (285)
T ss_dssp CHHHHHHHHHT--TCCSCEECTTCCCHHHHHH--HTTCHHHHHHHHHTTCCS---SCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred CHHHHHHHHHC--CCCCCCcCCCCCCHHHHHH--HCCcHHHHHHHHHCCCCC---CCCCCCCCCHHHHHHHcCHHHHHHH
Confidence 36899999998 555554 556999999999 779999999999988776 7778889999999999999999999
Q ss_pred HhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcccc---Ccc---
Q 037143 94 ILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLF---PGA--- 167 (382)
Q Consensus 94 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~---~~~--- 167 (382)
|++.+++. + .+.+|+||||+|+..|+.+++++|++.+ .+++.+|.+|+||||+|+..|+.++++. .|+
T Consensus 144 Ll~~g~~~-~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 217 (285)
T 3d9h_A 144 LLQHGASV-Q-PESDLASPIHEAARRGHVECVNSLIAYG----GNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN 217 (285)
T ss_dssp HHHTTCCS-S-CSCTTSCHHHHHHHHTCHHHHHHHHHTT----CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHCCCCC-C-CCCCCCCHHHHHHHcCCHHHHHHHHHCC----CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC
Confidence 99988763 3 3556999999999999999999999988 6899999999999999999998776642 111
Q ss_pred -------hhhhHHHHHHHHHHHhhc-cccccccccCCCCCccccchhh
Q 037143 168 -------ALQVQWEIKWFQHVKKLM-PRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 168 -------~l~~~~~~~~~~~v~~~~-~~~~~~~~N~~G~Tpldla~~~ 207 (382)
++.........+.++..+ .+.+++.+|++|+||+++|.+.
T Consensus 218 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~ 265 (285)
T 3d9h_A 218 QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPE 265 (285)
T ss_dssp CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcCc
Confidence 122111111111222211 2345678999999999999844
No 32
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.91 E-value=7.8e-25 Score=187.58 Aligned_cols=137 Identities=17% Similarity=0.073 Sum_probs=123.8
Q ss_pred HHHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHH
Q 037143 14 WAIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVK 92 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~ 92 (382)
...+++++|+++ +.+.+. |..|+||||+|+ ..++.+++++|++.+++. +..|..|.||||+|+..|+.++++
T Consensus 25 g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~~~ 97 (169)
T 2y1l_E 25 GRDDEVRILMAN--GADVNAEDASGWTPLHLAA--FNGHLEIVEVLLKNGADV---NAVDHAGMTPLRLAALFGHLEIVE 97 (169)
T ss_dssp TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCC---CccCCCCCCHHHHHHHcCCHHHHH
Confidence 457899999999 666654 556999999999 779999999999998776 777889999999999999999999
Q ss_pred HHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcc
Q 037143 93 KILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPL 162 (382)
Q Consensus 93 ~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~ 162 (382)
+|++.+++ ++.+|.+|+||||+|+..|+.+++++|++.+ ++++.+|.+|+||||+|+..|+.+++
T Consensus 98 ~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~l~~A~~~~~~~~~ 162 (169)
T 2y1l_E 98 VLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLKNG----ADVNAQDKFGKTAFDISIDNGNEDLA 162 (169)
T ss_dssp HHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCCcCCCCCCHHHHHHHhCCHHHH
Confidence 99999887 6778999999999999999999999999998 78999999999999999999986654
No 33
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.91 E-value=8.8e-25 Score=215.01 Aligned_cols=163 Identities=15% Similarity=0.101 Sum_probs=101.4
Q ss_pred HHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHH
Q 037143 16 IQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKI 94 (382)
Q Consensus 16 ~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~L 94 (382)
.++++.|+++ +.+.+. +..|+||||+|+ ..++.+++++|++.+++. +..|..|.||||+|+..|+.+++++|
T Consensus 225 ~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~~~~~---~~~~~~g~t~L~~A~~~~~~~~~~~L 297 (437)
T 1n11_A 225 VEVARSLLQY--GGSANAESVQGVTPLHLAA--QEGHAEMVALLLSKQANG---NLGNKSGLTPLHLVAQEGHVPVADVL 297 (437)
T ss_dssp HHHHHHHHHT--TCCTTCCCTTCCCHHHHHH--HTTCHHHHHHHHTTTCCT---TCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHc--CCCCCCCCCCCCCHHHHHH--HCCCHHHHHHHHhcCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4556666655 333333 233666666666 456666666666665544 45555666666666666666666666
Q ss_pred hhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHH
Q 037143 95 LDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWE 174 (382)
Q Consensus 95 l~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~ 174 (382)
++.+.+ ++.+|..|+||||+|+..|+.+++++|++.| +++|.+|..|+||||+|+..|+.++++.
T Consensus 298 l~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g----ad~n~~~~~g~t~L~~A~~~g~~~iv~~---------- 362 (437)
T 1n11_A 298 IKHGVM-VDATTRMGYTPLHVASHYGNIKLVKFLLQHQ----ADVNAKTKLGYSPLHQAAQQGHTDIVTL---------- 362 (437)
T ss_dssp HHHTCC-TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHTTCHHHHHH----------
T ss_pred HhCCcc-CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcC----CCCCCCCCCCCCHHHHHHHCChHHHHHH----------
Confidence 666555 4555666666666666666666666666666 5666666666666666666666444321
Q ss_pred HHHHHHHHhhccccccccccCCCCCccccchhhh
Q 037143 175 IKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTESH 208 (382)
Q Consensus 175 ~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~~ 208 (382)
.++. +.+.+.+|++|+||+++|.+..
T Consensus 363 -----Ll~~---ga~~~~~~~~g~t~l~~A~~~g 388 (437)
T 1n11_A 363 -----LLKN---GASPNEVSSDGTTPLAIAKRLG 388 (437)
T ss_dssp -----HHHT---TCCSCCCCSSSCCHHHHHHHTT
T ss_pred -----HHHC---cCCCCCCCCCCCCHHHHHHHcC
Confidence 1222 2345689999999999987653
No 34
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.91 E-value=1e-24 Score=184.94 Aligned_cols=137 Identities=17% Similarity=0.097 Sum_probs=121.7
Q ss_pred HHHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHH
Q 037143 14 WAIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVK 92 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~ 92 (382)
...++++.|+++ +.+.+. +..|+||||+|+ . ++.+++++|++.+++. +.+|..|+||||+|+..|+.++++
T Consensus 16 g~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~--~-~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~ 87 (162)
T 1ihb_A 16 GDLEQLTSLLQN--NVNVNAQNGFGRTALQVMK--L-GNPEIARRLLLRGANP---DLKDRTGFAVIHDAARAGFLDTLQ 87 (162)
T ss_dssp TCHHHHHHHTTS--CCCTTCCCTTSCCHHHHCC--S-SCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred CCHHHHHHHHhC--CCCccccCccCccHHHHHH--c-CcHHHHHHHHHcCCCC---CCCCCCCCCHHHHHHHcCCHHHHH
Confidence 457899999998 555554 556999999998 6 9999999999998776 777889999999999999999999
Q ss_pred HHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcc
Q 037143 93 KILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPL 162 (382)
Q Consensus 93 ~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~ 162 (382)
+|++.+.+ ++.+|.+|+||||+|+..|+.+++++|++.+. ..++.+|.+|+||||+|+..|+.+++
T Consensus 88 ~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---~~~~~~~~~g~t~l~~A~~~~~~~~~ 153 (162)
T 1ihb_A 88 TLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTA---SNVGHRNHKGDTACDLARLYGRNEVV 153 (162)
T ss_dssp HHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSC---CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccC---CCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 99999877 67889999999999999999999999999983 34799999999999999999996654
No 35
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.91 E-value=2e-24 Score=185.19 Aligned_cols=150 Identities=19% Similarity=0.117 Sum_probs=126.2
Q ss_pred CCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHHHH
Q 037143 37 GQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILLLA 116 (382)
Q Consensus 37 G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A 116 (382)
+.||||.|+ ..|+.++++.|++.++.. .+..|..|+||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|
T Consensus 2 ~~~~L~~A~--~~g~~~~v~~ll~~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A 76 (172)
T 3v30_A 2 DSLSIHQLA--AQGELDQLKEHLRKGDNL--VNKPDERGFTPLIWASAFGEIETVRFLLEWGAD-PHILAKERESALSLA 76 (172)
T ss_dssp --CCHHHHH--HTTCHHHHHHHHTTCSGG--GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHH
T ss_pred chhhHHHHH--HcCCHHHHHHHHHcCccc--ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-chhhcccCCCHHHHH
Confidence 579999999 789999999999987652 267788999999999999999999999999887 677899999999999
Q ss_pred HHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccccCC
Q 037143 117 IENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYNDD 196 (382)
Q Consensus 117 ~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~~ 196 (382)
+..|+.+++++|++.+ ++++.+|.+|+||||+|+..|+.++++. .++. +.+++.+|.+
T Consensus 77 ~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------Ll~~---ga~~~~~~~~ 134 (172)
T 3v30_A 77 STGGYTDIVGLLLERD----VDINIYDWNGGTPLLYAVRGNHVKCVEA---------------LLAR---GADLTTEADS 134 (172)
T ss_dssp HHTTCHHHHHHHHTTT----CCTTCCCTTSCCHHHHHHHTTCHHHHHH---------------HHHT---TCCTTCCCTT
T ss_pred HHCCCHHHHHHHHHcC----CCCCCCCCCCCCHHHHHHHcCCHHHHHH---------------HHHc---CCCccccCCC
Confidence 9999999999999998 7999999999999999999998665431 1222 2345689999
Q ss_pred CCCccccchhhh-HHHHH
Q 037143 197 GKTPDEVFTESH-RDLVK 213 (382)
Q Consensus 197 G~Tpldla~~~~-~~l~~ 213 (382)
|.||+++|.... .+..+
T Consensus 135 g~t~l~~A~~~~~~~~~~ 152 (172)
T 3v30_A 135 GYTPMDLAVALGYRKVQQ 152 (172)
T ss_dssp SCCHHHHHHHHTCHHHHH
T ss_pred CCCHHHHHHHhCcHHHHH
Confidence 999999997753 34333
No 36
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.90 E-value=3.9e-25 Score=205.05 Aligned_cols=166 Identities=18% Similarity=0.171 Sum_probs=135.7
Q ss_pred HHHHHHHHHcCCCCCCcc-cccCCCCCcccccccCCCcccccccCCCCCc-hhhhhhhccCCCCcHHHHHH-----HcCc
Q 037143 15 AIQVLNELVDHRNPDQYK-YVYNGQDPRISTFGQDVNAFTARETPLDPST-YKKKNARRSRRKETPILVAA-----KMGV 87 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~-~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~g~tpLh~Aa-----~~g~ 87 (382)
.++.++.+++...+...+ .|.+|+||||+|+ ..++.+++++|++.++ +. +..|..|.||||+|+ ..|+
T Consensus 88 ~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~--~~g~~~~v~~Ll~~g~~~~---~~~~~~g~tpL~~a~~~~~~~~~~ 162 (276)
T 4hbd_A 88 HLVTFRAMSARLLDYVVNIADSNGNTALHYSV--SHANFPVVQQLLDSGVCKV---DKQNRAGYSPIMLTALATLKTQDD 162 (276)
T ss_dssp HHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHH--HTTCHHHHHHHHHTSCCCT---TCCCTTSCCHHHHGGGCCCCSHHH
T ss_pred HHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHH--HCCCHHHHHHHHHCCCCcC---CCCCCCCCCHHHHHHHHHhhhhhh
Confidence 345566665542121133 4566999999999 7899999999999987 54 778889999999999 7799
Q ss_pred HHHHHHHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcc
Q 037143 88 TEMVKKILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGA 167 (382)
Q Consensus 88 ~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~ 167 (382)
.++++.|++.+.+ .+..|..|+||||+|+..|+.+++++|++.| +++|.+|.+|+||||+|+..|+.++++.
T Consensus 163 ~~~v~~Ll~~g~~-~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g----ad~n~~d~~G~TpLh~A~~~g~~~iv~~--- 234 (276)
T 4hbd_A 163 IETVLQLFRLGNI-NAKASQAGQTALMLAVSHGRVDVVKALLACE----ADVNVQDDDGSTALMCACEHGHKEIAGL--- 234 (276)
T ss_dssp HHHHHHHHHHSCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHHTCHHHHHH---
T ss_pred HHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhCC----CCCCCCCCCCCCHHHHHHHCCCHHHHHH---
Confidence 9999999999865 5677889999999999999999999999998 7999999999999999999999665431
Q ss_pred hhhhHHHHHHHHHHHhhccccccccccCCCCCccccchhh
Q 037143 168 ALQVQWEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 168 ~l~~~~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~ 207 (382)
.++ ..+.+++.+|++|.||+++|.+.
T Consensus 235 ------------Ll~--~~gad~~~~d~~g~TpL~~A~~~ 260 (276)
T 4hbd_A 235 ------------LLA--VPSCDISLTDRDGSTALMVALDA 260 (276)
T ss_dssp ------------HHT--STTCCTTCCCTTSCCHHHHHHHH
T ss_pred ------------HHh--cCCCCCcCcCCCCCCHHHHHHHc
Confidence 111 13445678999999999999876
No 37
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.90 E-value=6.3e-25 Score=211.01 Aligned_cols=170 Identities=14% Similarity=0.070 Sum_probs=105.1
Q ss_pred HHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhh--------------------------
Q 037143 15 AIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKK-------------------------- 67 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~-------------------------- 67 (382)
..+++++|+++ +.+.+. |..|+||||+|+ ..++.+++++|++.+++...
T Consensus 32 ~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~--~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~ 107 (364)
T 3ljn_A 32 QTDEVRRLIET--GVSPTIQNRFGCTALHLAC--KFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGA 107 (364)
T ss_dssp CHHHHHHHHHT--TCCTTCCCTTCCCHHHHHH--HHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHc--CCCccccCCCCCcHHHHHH--HcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhc
Confidence 36788888887 555554 445888888888 66788888888776653210
Q ss_pred ------hhh-----------------ccCCCCcHHHHHHHcC--cHHHHHHHhhhCCCCccccCCCCCcHHHHHHHcCCH
Q 037143 68 ------NAR-----------------RSRRKETPILVAAKMG--VTEMVKKILDTFPVAMWDLDPAEKNILLLAIENRRT 122 (382)
Q Consensus 68 ------~~~-----------------~~~~g~tpLh~Aa~~g--~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~ 122 (382)
.+. .|..|.||||+|+..| +.+++++|++.+.+ ++.+|..|+||||+|+..|+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~ 186 (364)
T 3ljn_A 108 KERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS-PTAKDKADETPLMRAMEFRNR 186 (364)
T ss_dssp HHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCH
T ss_pred cccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCH
Confidence 011 4445666666666666 66666666666554 455566666666666666666
Q ss_pred HHHHHHHhCCCc-cccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccccCCCCCcc
Q 037143 123 SVYNLLLSRKAL-GQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYNDDGKTPD 201 (382)
Q Consensus 123 ~iv~~Ll~~~~~-~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~~G~Tpl 201 (382)
+++++|++.+.. ...++|.+|.+|+||||+|+..|+.+++++ .++ .+.+++.+|++|.||+
T Consensus 187 ~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~---------------Ll~---~gad~~~~d~~g~tpL 248 (364)
T 3ljn_A 187 EALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMR---------------FVE---MGIDVNMEDNEHTVPL 248 (364)
T ss_dssp HHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHH---------------HHT---TTCCTTCCCTTSCCHH
T ss_pred HHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHH---------------HHH---cCCCCCCCCCCCCCHH
Confidence 666666665510 011266666666666666666665443321 122 2334678999999999
Q ss_pred ccchhh
Q 037143 202 EVFTES 207 (382)
Q Consensus 202 dla~~~ 207 (382)
++|...
T Consensus 249 ~~A~~~ 254 (364)
T 3ljn_A 249 YLSVRA 254 (364)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 999775
No 38
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.90 E-value=1e-24 Score=200.12 Aligned_cols=179 Identities=17% Similarity=0.089 Sum_probs=119.6
Q ss_pred HHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHH
Q 037143 15 AIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKK 93 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~ 93 (382)
..+++++|+++ +.+.+. |.+|+||||+|+ ..++.+++++|++.+++. +. +.+|.||||+|+..|+.++++.
T Consensus 48 ~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~---~~-~~~g~t~L~~A~~~~~~~~v~~ 119 (261)
T 2xai_A 48 HLSCVKILLKH--GAQVNGVTADWHTPLFNAC--VSGSWDCVNLLLQHGASV---QP-ESDLASPIHEAARRGHVECVNS 119 (261)
T ss_dssp CHHHHHHHHHT--TCCTTCCCTTSCCHHHHHH--HHTCHHHHHHHHHTTCCS---SC-SCTTCCHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHC--CCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHHCCCCC---CC-CCCCCCHHHHHHHcCcHHHHHH
Confidence 35788888887 555554 445888888888 667888888888777654 32 3457888888888888888888
Q ss_pred HhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcccc---Ccchh-
Q 037143 94 ILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLF---PGAAL- 169 (382)
Q Consensus 94 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~---~~~~l- 169 (382)
|++.+++ ++..|.+|+||||+|+..|+.+++++|++.| +++|. |.+|+||||+|+..|+.++++. .|+..
T Consensus 120 Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~ 193 (261)
T 2xai_A 120 LIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLESG----ADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQ 193 (261)
T ss_dssp HHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHHHT----CCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHcCCC-CCcCCCCCCCHHHHHHHhCCHHHHHHHHHcC----CCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 8877766 5667778888888888888888888888877 56664 7778888888888777665542 12111
Q ss_pred ----------hhHH-HHHHHHH-HHhhccc-----cccccccCCCCCccccchhh
Q 037143 170 ----------QVQW-EIKWFQH-VKKLMPR-----HFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 170 ----------~~~~-~~~~~~~-v~~~~~~-----~~~~~~N~~G~Tpldla~~~ 207 (382)
+... .....+. ++...++ ...+.+|..|+||+|.+.+.
T Consensus 194 ~~d~~g~tpl~~A~~~~~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~ 248 (261)
T 2xai_A 194 AKNAEGKRPVELVPPESPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKL 248 (261)
T ss_dssp CCCTTSCCGGGGSCTTCTHHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGS
T ss_pred CcCCCCCChhhhccccccHHHHHHhccCCccHHHHHHHHHHHHhchhccccCccc
Confidence 1100 0000111 1112222 23568899999999998764
No 39
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.90 E-value=9.6e-25 Score=199.64 Aligned_cols=176 Identities=14% Similarity=0.101 Sum_probs=128.2
Q ss_pred HHHHHHcCCCCCCccc-----ccCCCCCccccccc-CCCcccccccCCCCCchhhh--------hhhccCCCCcHHHHHH
Q 037143 18 VLNELVDHRNPDQYKY-----VYNGQDPRISTFGQ-DVNAFTARETPLDPSTYKKK--------NARRSRRKETPILVAA 83 (382)
Q Consensus 18 iv~~Ll~~~~~~~~~~-----~~~G~TPLh~A~~~-~~~~~~~v~~Ll~~~~~~~~--------~~~~~~~g~tpLh~Aa 83 (382)
++++|+++ +.+.+. |..|+||||+|+.. ..++.+++++|++.+++... .+..|..|+||||+||
T Consensus 24 ll~~l~~~--~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~ 101 (260)
T 3jxi_A 24 LLSFLLTH--KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAI 101 (260)
T ss_dssp HHHHHHHH--TCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHH
T ss_pred HHHHHHhc--CCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHH
Confidence 56666667 444432 25599999988732 46899999999998754211 1333447999999999
Q ss_pred HcCcHHHHHHHhhhCCCCccccC--------------CCCCcHHHHHHHcCCHHHHHHHHh---CCCccccccccccCCC
Q 037143 84 KMGVTEMVKKILDTFPVAMWDLD--------------PAEKNILLLAIENRRTSVYNLLLS---RKALGQTIFWQVDNQG 146 (382)
Q Consensus 84 ~~g~~~~v~~Ll~~~~~~~~~~d--------------~~G~t~Lh~A~~~g~~~iv~~Ll~---~~~~~~~~~~~~D~~G 146 (382)
..|+.+++++|++.+++ ++.+| ..|+||||+|+..|+.+++++|++ .| +++|.+|.+|
T Consensus 102 ~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g----a~~~~~d~~g 176 (260)
T 3jxi_A 102 ERRCKHYVELLVEKGAD-VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQ----ADLRRQDSRG 176 (260)
T ss_dssp HTTCHHHHHHHHHTTCC-TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC----CCTTCCCTTS
T ss_pred HcCCHHHHHHHHhCCCC-cCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC----CCCcccCCCC
Confidence 99999999999999887 56666 689999999999999999999999 77 7999999999
Q ss_pred CCHHHHHHhhCCCCccccCcchhhhHHH-HHHHHHHHhhc----cccccccccCCCCCccccchhh
Q 037143 147 NSALHLAAKYGDHLPLLFPGAALQVQWE-IKWFQHVKKLM----PRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 147 ~TpLH~A~~~g~~~~~~~~~~~l~~~~~-~~~~~~v~~~~----~~~~~~~~N~~G~Tpldla~~~ 207 (382)
+||||+|+..++...- ......+ +++ .++... .....+.+|++|.||+++|.+.
T Consensus 177 ~TpLh~A~~~~~~~~~-----~~~~~~~~v~~--Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~ 235 (260)
T 3jxi_A 177 NTVLHALVAIADNTRE-----NTKFVTKMYDL--LLIKCAKLFPDTNLEALLNNDGLSPLMMAAKT 235 (260)
T ss_dssp CCHHHHHHHHCCSSHH-----HHHHHHHHHHH--HHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred CcHHHHHHHhccCchh-----HHHHHHHHHHH--HHHhCcccccccchhhcccCCCCCHHHHHHHc
Confidence 9999999998873210 0000000 011 111111 1112368999999999999875
No 40
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.90 E-value=7.1e-25 Score=186.74 Aligned_cols=137 Identities=16% Similarity=0.102 Sum_probs=121.9
Q ss_pred HHHHHHHHHHcCCCCCCcccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHH
Q 037143 14 WAIQVLNELVDHRNPDQYKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKK 93 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~ 93 (382)
...++++.|++..+......+..|+||||+|+ ..++.+++++|++.+.+. +.+|..|+||||+|+..|+.+++++
T Consensus 19 g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~ 93 (165)
T 3twr_A 19 GDVETVKKLCTVQSVNCRDIEGRQSTPLHFAA--GYNRVSVVEYLLQHGADV---HAKDKGGLVPLHNACSYGHYEVAEL 93 (165)
T ss_dssp TCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHH--HTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHHcCCCCccccccCCCCHHHHHH--HcChHHHHHHHHhcCCCC---CccCCCCCCHHHHHHHcCcHHHHHH
Confidence 34789999999755555556667999999999 789999999999998876 7788899999999999999999999
Q ss_pred HhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCc
Q 037143 94 ILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLP 161 (382)
Q Consensus 94 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~ 161 (382)
|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.| ++++.+|.+|+||||+|.. |+.++
T Consensus 94 Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~t~l~~a~~-~~~~i 155 (165)
T 3twr_A 94 LVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQHG----ADPTKKNRDGNTPLDLVKD-GDTDI 155 (165)
T ss_dssp HHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCTGGGSCT-TCHHH
T ss_pred HHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCcccCCCCCChhHhHhc-CChHH
Confidence 9999887 6778999999999999999999999999998 7999999999999999876 66444
No 41
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.90 E-value=3e-24 Score=180.93 Aligned_cols=137 Identities=15% Similarity=0.129 Sum_probs=120.3
Q ss_pred HHHHHHHHHHcCCCCCCcccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHH
Q 037143 14 WAIQVLNELVDHRNPDQYKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKK 93 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~ 93 (382)
...++++.|+++.+......+..|+||||+ + ..++.+++++|++.+++. +.+|..|+||||+|+..|+.+++++
T Consensus 13 g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~--~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~ 86 (156)
T 1bd8_A 13 GDVQEVRRLLHRELVHPDALNRFGKTALQV-M--MFGSTAIALELLKQGASP---NVQDTSGTSPVHDAARTGFLDTLKV 86 (156)
T ss_dssp TCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-S--CTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHHhhCcCccccCCCCCcHHHH-H--HcCCHHHHHHHHHCCCCC---CCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 346899999988222444456679999999 7 679999999999998876 7788899999999999999999999
Q ss_pred HhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcc
Q 037143 94 ILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPL 162 (382)
Q Consensus 94 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~ 162 (382)
|++.+++ ++.+|.+|+||||+|+..|+.+++++|++. ++++.+|.+|+||||+|+..|+.+++
T Consensus 87 Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----~~~~~~~~~g~t~l~~A~~~~~~~~v 149 (156)
T 1bd8_A 87 LVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-----SDLHRRDARGLTPLELALQRGAQDLV 149 (156)
T ss_dssp HHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-----SCTTCCCTTSCCHHHHHHHSCCHHHH
T ss_pred HHHcCCC-CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-----cCCCCcCCCCCCHHHHHHHcCcHHHH
Confidence 9999877 678899999999999999999999999987 38899999999999999999986654
No 42
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.90 E-value=2.5e-24 Score=193.96 Aligned_cols=170 Identities=16% Similarity=0.122 Sum_probs=129.5
Q ss_pred ccccCCCCCcccccccCCCcccccccCCC----CCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCC
Q 037143 32 KYVYNGQDPRISTFGQDVNAFTARETPLD----PSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDP 107 (382)
Q Consensus 32 ~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~----~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~ 107 (382)
..|.+|+||||+|+ ..|+.++++.|++ .+.+. +..|..|.||||+|+..|+.+++++|++.+.+ ++..|.
T Consensus 4 ~~d~~g~t~L~~A~--~~g~~~~v~~Ll~~~~~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~ 77 (241)
T 1k1a_A 4 RADEDGDTPLHIAV--VQGNLPAVHRLVNLFQQGGREL---DIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS-PMALDR 77 (241)
T ss_dssp ---CTTCCHHHHHH--HTTCHHHHHHHHHHHHHTTCCS---CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCT
T ss_pred ccCCCCCcHHHHHH--HcCCHHHHHHHHHHHHhcCCCC---CcccccCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCC
Confidence 35677999999999 7899999999886 55544 67788899999999999999999999999877 677899
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcccc---Cc------------chhhhH
Q 037143 108 AEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLF---PG------------AALQVQ 172 (382)
Q Consensus 108 ~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~---~~------------~~l~~~ 172 (382)
.|+||||+|+..|+.+++++|++.+.....+++.+|.+|+||||+|+..|+.++++. .| .++...
T Consensus 78 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A 157 (241)
T 1k1a_A 78 HGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHA 157 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHH
Confidence 999999999999999999999998843334889999999999999999999776542 11 112211
Q ss_pred HHHHHHHHHHhhc-cccccccccCCCCCccccchhh
Q 037143 173 WEIKWFQHVKKLM-PRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 173 ~~~~~~~~v~~~~-~~~~~~~~N~~G~Tpldla~~~ 207 (382)
......+.++... .+.+++.+|.+|.||+++|...
T Consensus 158 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 193 (241)
T 1k1a_A 158 VENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGR 193 (241)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 1111122222211 2334678889999999998764
No 43
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.90 E-value=1.9e-24 Score=184.51 Aligned_cols=137 Identities=17% Similarity=0.140 Sum_probs=123.2
Q ss_pred HHHHHHHHHHcCCCCCCcc-cccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHH
Q 037143 14 WAIQVLNELVDHRNPDQYK-YVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVK 92 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~-~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~ 92 (382)
...++++.|++. +.+.+ .|..|+||||+|+ ..++.+++++|++.+++. +..|..|.||||+|+..|+.++++
T Consensus 14 g~~~~v~~ll~~--~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~ 86 (167)
T 3v31_A 14 GEMLYLATRIEQ--ENVINHTDEEGFTPLMWAA--AHGQIAVVEFLLQNGADP---QLLGKGRESALSLACSKGYTDIVK 86 (167)
T ss_dssp TCHHHHHHHHHH--SSCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred CCHHHHHHHHHc--CCCcCCCCCCCCCHHHHHH--HCCCHHHHHHHHHcCCCC---CCcCCCCCcHHHHHHHcCCHHHHH
Confidence 347899999998 55555 4556999999999 779999999999998776 777889999999999999999999
Q ss_pred HHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcc
Q 037143 93 KILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPL 162 (382)
Q Consensus 93 ~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~ 162 (382)
+|++.+++ ++.+|..|+||||+|+..|+.+++++|++.| ++++.+|.+|+||||+|+..|+.+++
T Consensus 87 ~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~l~~A~~~~~~~~~ 151 (167)
T 3v31_A 87 MLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLESG----ADPTIETDSGYNSMDLAVALGYRSVQ 151 (167)
T ss_dssp HHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCCcCCCCCCHHHHHHHcCcHHHH
Confidence 99999887 6788999999999999999999999999998 79999999999999999999996654
No 44
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.90 E-value=1.1e-24 Score=196.57 Aligned_cols=168 Identities=13% Similarity=0.067 Sum_probs=137.1
Q ss_pred HHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchh---hhhhhccCCCCcHHHHHHHcCcHHH
Q 037143 15 AIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYK---KKNARRSRRKETPILVAAKMGVTEM 90 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~---~~~~~~~~~g~tpLh~Aa~~g~~~~ 90 (382)
..+++++|+++ +.+.+. |..|+||||+|+ ..++.+++++|++.+++. ...+..+..|.||||+|+..|+.++
T Consensus 57 ~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 132 (236)
T 1ikn_D 57 QPEIAEALLGA--GCDPELRDFRGNTPLHLAC--EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGI 132 (236)
T ss_dssp CHHHHHCCCSC--CCCSCCCCTTCCCHHHHHH--HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHH
T ss_pred CHHHHHHHHHc--CCCCCCcCCCCCCHHHHHH--HcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHH
Confidence 46899999998 666665 556999999999 779999999999887541 1136667889999999999999999
Q ss_pred HHHHhhhCCCCccccCC-CCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchh
Q 037143 91 VKKILDTFPVAMWDLDP-AEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAAL 169 (382)
Q Consensus 91 v~~Ll~~~~~~~~~~d~-~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l 169 (382)
+++|++.+++ ++.+|. .|+||||+|+..|+.+++++|++.| ++++.+|.+|+||||+|+..|+.++++.
T Consensus 133 v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~tpl~~A~~~~~~~~~~~----- 202 (236)
T 1ikn_D 133 VELLVSLGAD-VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG----ADVNRVTYQGYSPYQLTWGRPSTRIQQQ----- 202 (236)
T ss_dssp HHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTT----CCSCCCCTTCCCGGGGCTTSSCHHHHHH-----
T ss_pred HHHHHHcCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCcccCCCCCHHHHHHccCchHHHHH-----
Confidence 9999999988 566776 9999999999999999999999998 7999999999999999999998665432
Q ss_pred hhHHHHHHHHHHHhhccccccccccCCCCCccccchhh
Q 037143 170 QVQWEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 170 ~~~~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~ 207 (382)
.++... ......+|.+|.||.+...+.
T Consensus 203 ----------Ll~~ga-~~~~~~~~~~~~~~~~~~~~~ 229 (236)
T 1ikn_D 203 ----------LGQLTL-ENLQMLPESEDEESYDTESEF 229 (236)
T ss_dssp ----------HHTTSC-GGGSSCCCCCTTTCCCCC---
T ss_pred ----------HHHcch-hhhhcCCccchHHHHhhhccc
Confidence 122221 122457899999999987654
No 45
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.90 E-value=3.6e-24 Score=185.04 Aligned_cols=147 Identities=18% Similarity=0.149 Sum_probs=118.5
Q ss_pred CCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHHH
Q 037143 36 NGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILLL 115 (382)
Q Consensus 36 ~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~ 115 (382)
++.+|||.|+ ..++.++++.|++.+... .+..|..|+||||+||..|+.+++++|++.+.+ ++.+|..|+||||+
T Consensus 4 ~~~~~l~~A~--~~g~~~~v~~ll~~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 78 (179)
T 3f6q_A 4 EFMDDIFTQC--REGNAVAVRLWLDNTEND--LNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR-INVMNRGDDTPLHL 78 (179)
T ss_dssp ---CCHHHHH--HHTCHHHHHHHHHCTTSC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHH
T ss_pred HHHHHHHHHH--HcCCHHHHHHHHhcCccc--ccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCCHHHH
Confidence 4789999999 779999999988774321 266788899999999999999999999998877 67788999999999
Q ss_pred HHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccccC
Q 037143 116 AIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYND 195 (382)
Q Consensus 116 A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~ 195 (382)
|+..|+.+++++|++.+ ++++.+|.+|+||||+|+..|+.++++. .++. +.+++.+|.
T Consensus 79 A~~~~~~~~v~~Ll~~g----~~~~~~d~~g~t~L~~A~~~~~~~~v~~---------------Ll~~---ga~~~~~~~ 136 (179)
T 3f6q_A 79 AASHGHRDIVQKLLQYK----ADINAVNEHGNVPLHYACFWGQDQVAED---------------LVAN---GALVSICNK 136 (179)
T ss_dssp HHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHTTCHHHHHH---------------HHHT---TCCSSBCCT
T ss_pred HHHcCCHHHHHHHHHcC----CCCCccCCCCCCHHHHHHHcCCHHHHHH---------------HHHC---CCCcchhcc
Confidence 99999999999999998 7899999999999999999988655421 1222 234568899
Q ss_pred CCCCccccchhhhH
Q 037143 196 DGKTPDEVFTESHR 209 (382)
Q Consensus 196 ~G~Tpldla~~~~~ 209 (382)
+|.||+++|.+...
T Consensus 137 ~g~tpl~~A~~~~~ 150 (179)
T 3f6q_A 137 YGEMPVDKAKAPLR 150 (179)
T ss_dssp TSCCGGGGSCHHHH
T ss_pred CCCCcHHHHHHHHH
Confidence 99999999876543
No 46
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.90 E-value=3.7e-24 Score=203.14 Aligned_cols=163 Identities=16% Similarity=0.105 Sum_probs=134.6
Q ss_pred HHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHH
Q 037143 15 AIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKK 93 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~ 93 (382)
..+++++|+++ +.+.+. |..|+||||+|+ ..++.+++++|++.+++. +..|..|.||||+|+..|+.+++++
T Consensus 70 ~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~--~~g~~~iv~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~ 142 (351)
T 3utm_A 70 RVRIVQLLLQH--GADVHAKDKGGLVPLHNAC--SYGHYEVTELLLKHGACV---NAMDLWQFTPLHEAASKNRVEVCSL 142 (351)
T ss_dssp CHHHHHHHHHT--TCCTTCCCTTCCCHHHHHH--HTTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHc--CCCCCccCCCCCcHHHHHH--HCCCHHHHHHHHHCCCCC---CCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 47899999999 666664 456999999999 779999999999998876 7778899999999999999999999
Q ss_pred HhhhCCCCccc------------------------------------------------------cCCCCCcHHHHHHHc
Q 037143 94 ILDTFPVAMWD------------------------------------------------------LDPAEKNILLLAIEN 119 (382)
Q Consensus 94 Ll~~~~~~~~~------------------------------------------------------~d~~G~t~Lh~A~~~ 119 (382)
|++.+.+ ++. .+..|+||||+|+..
T Consensus 143 Ll~~g~~-~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~ 221 (351)
T 3utm_A 143 LLSHGAD-PTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVAS 221 (351)
T ss_dssp HHHTTCC-TTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHC
T ss_pred HHHcCCC-CccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHH
Confidence 9998765 222 346788999999999
Q ss_pred ---CCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccccCC
Q 037143 120 ---RRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYNDD 196 (382)
Q Consensus 120 ---g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~~ 196 (382)
++.+++++|++.+ +++|.+|.+|+||||+|+..|+.++++. .++. +.+++.+|..
T Consensus 222 ~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t~L~~A~~~g~~~~v~~---------------Ll~~---ga~~n~~d~~ 279 (351)
T 3utm_A 222 LHPKRKQVAELLLRKG----ANVNEKNKDFMTPLHVAAERAHNDVMEV---------------LHKH---GAKMNALDSL 279 (351)
T ss_dssp CSTTHHHHHHHHHHTT----CCTTCCCTTCCCHHHHHHHTTCHHHHHH---------------HHHT---TCCTTCCCTT
T ss_pred hCccHHHHHHHHHHcC----CCcCCcCCCCCCHHHHHHHcCCHHHHHH---------------HHHC---CCCCCCcCCC
Confidence 5589999999998 7999999999999999999999665432 1121 2345678888
Q ss_pred CCCccccchhh
Q 037143 197 GKTPDEVFTES 207 (382)
Q Consensus 197 G~Tpldla~~~ 207 (382)
|.||+++|...
T Consensus 280 g~t~L~~A~~~ 290 (351)
T 3utm_A 280 GQTALHRAALA 290 (351)
T ss_dssp SCCHHHHHHHH
T ss_pred CCCHHHHHHHc
Confidence 88888887654
No 47
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.90 E-value=1.2e-24 Score=197.28 Aligned_cols=173 Identities=12% Similarity=0.020 Sum_probs=123.3
Q ss_pred HHHHHHHHHHcCCCCCCcccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHH
Q 037143 14 WAIQVLNELVDHRNPDQYKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKK 93 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~ 93 (382)
...++++.|+++ +.+.+.+..|.||||.|+ ..|+.+++++|++.+++. +..|..|+||||+||..|+.+++++
T Consensus 16 ~~~~~~~~ll~~--g~~~~~~~~~~t~L~~A~--~~g~~~~v~~Ll~~g~~~---~~~d~~g~t~L~~A~~~g~~~~v~~ 88 (239)
T 1ycs_B 16 NLRKTGSERIAH--GMRVKFNPLPLALLLDSS--LEGEFDLVQRIIYEVDDP---SLPNDEGITALHNAVCAGHTEIVKF 88 (239)
T ss_dssp -----------------------CHHHHHHHH--HHTCHHHHHHHTSTTSSC---CCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred hhHHHHHHHhcc--CCCcccCchhhHHHHHHH--HcCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 456789999999 877777777999999999 779999999999998866 7788999999999999999999999
Q ss_pred HhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCC-CHHHHH--HhhCCCCccccCcchhh
Q 037143 94 ILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGN-SALHLA--AKYGDHLPLLFPGAALQ 170 (382)
Q Consensus 94 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~-TpLH~A--~~~g~~~~~~~~~~~l~ 170 (382)
|++.+.+ ++.+|.+|+||||+|+..|+.+++++|++.| ++++.+|.+|. ||||+| +..|+.+++++.
T Consensus 89 Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~L----- 158 (239)
T 1ycs_B 89 LVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVESG----AAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL----- 158 (239)
T ss_dssp HHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHH-----
T ss_pred HHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCcceecCCCCcchHHHHHHhhhccHHHHHHH-----
Confidence 9999887 7889999999999999999999999999998 79999998887 999999 777887775420
Q ss_pred hHHHHHHHHHHHhhccccccccccCCCCCccccchhh
Q 037143 171 VQWEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 171 ~~~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~ 207 (382)
+... ..+............+..|.+|.+++.++
T Consensus 159 l~~~----a~~~~~~~~~~~al~d~~~~~~~eLa~~~ 191 (239)
T 1ycs_B 159 YGVQ----EKMGIMNKGVIYALWDYEPQNDDELPMKE 191 (239)
T ss_dssp HHHH----HHTTTTGGGEEEESSCBCCSSTTBCCBCS
T ss_pred HHhh----hcccccccceEEEEeccCCCCCCcccccC
Confidence 0000 00000111112335578899999887654
No 48
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.90 E-value=2.5e-24 Score=200.43 Aligned_cols=122 Identities=15% Similarity=-0.004 Sum_probs=108.7
Q ss_pred cccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCC
Q 037143 31 YKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEK 110 (382)
Q Consensus 31 ~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~ 110 (382)
...|.+|+||||+|+ ..|+.+++++|++.+.+. +..|.+|+||||+||..|+.+++++|++.+.+ ++.+|.+|+
T Consensus 53 ~~~~~~g~t~L~~Aa--~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~ 126 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAA--IHGHQLSLRNLISQGWAV---NIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWH 126 (285)
T ss_dssp CSSSCCSCCHHHHHH--HTTCHHHHHHHHHTTCCS---CEECTTCCCHHHHHHHTTCHHHHHHHHHTTCC-SSCCCTTCC
T ss_pred cCCCccCCCHHHHHH--HcCCHHHHHHHHHCCCCC---CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCC-CCCCCCCCC
Confidence 345666999999999 789999999999998776 77888999999999999999999999999877 678899999
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccc
Q 037143 111 NILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLL 163 (382)
Q Consensus 111 t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~ 163 (382)
||||+|+..|+.+++++|++.+ .+++.. .+|+||||+|+..|+.++++
T Consensus 127 t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-~~g~t~L~~A~~~g~~~~v~ 174 (285)
T 3d9h_A 127 TPLFNACVSGSWDCVNLLLQHG----ASVQPE-SDLASPIHEAARRGHVECVN 174 (285)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTT----CCSSCS-CTTSCHHHHHHHHTCHHHHH
T ss_pred CHHHHHHHcCHHHHHHHHHHCC----CCCCCC-CCCCCHHHHHHHcCCHHHHH
Confidence 9999999999999999999998 566654 45999999999999977654
No 49
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.90 E-value=1e-24 Score=186.83 Aligned_cols=147 Identities=18% Similarity=0.101 Sum_probs=126.8
Q ss_pred ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHH
Q 037143 34 VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNIL 113 (382)
Q Consensus 34 ~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~L 113 (382)
...+.||||.|+ ..|+.+++++|++.+.+. +..|..|.||||+|+..|+.+++++|++.+.+ ++..|..|+|||
T Consensus 11 ~~~~~~~l~~A~--~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L 84 (169)
T 2y1l_E 11 GSDLGKKLLEAA--RAGRDDEVRILMANGADV---NAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD-VNAVDHAGMTPL 84 (169)
T ss_dssp --CHHHHHHHHH--HHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred CCcccchHHHHH--HcCCHHHHHHHHHCCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHH
Confidence 344889999999 789999999999998776 77788999999999999999999999999877 677899999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccc
Q 037143 114 LLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRY 193 (382)
Q Consensus 114 h~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~ 193 (382)
|+|+..|+.+++++|++.+ ++++.+|.+|+||||+|+..|+.++++. .++. ..+++.+
T Consensus 85 ~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------Ll~~---g~~~~~~ 142 (169)
T 2y1l_E 85 RLAALFGHLEIVEVLLKNG----ADVNANDMEGHTPLHLAAMFGHLEIVEV---------------LLKN---GADVNAQ 142 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHTTCHHHHHH---------------HHHT---TCCTTCC
T ss_pred HHHHHcCCHHHHHHHHHcC----CCCCCCCCCCCCHHHHHHHcCCHHHHHH---------------HHHc---CCCCCCc
Confidence 9999999999999999998 7999999999999999999998665431 1222 2335689
Q ss_pred cCCCCCccccchhhh
Q 037143 194 NDDGKTPDEVFTESH 208 (382)
Q Consensus 194 N~~G~Tpldla~~~~ 208 (382)
|.+|.||+++|.+..
T Consensus 143 ~~~g~t~l~~A~~~~ 157 (169)
T 2y1l_E 143 DKFGKTAFDISIDNG 157 (169)
T ss_dssp CTTSCCHHHHHHHTT
T ss_pred CCCCCCHHHHHHHhC
Confidence 999999999997653
No 50
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.90 E-value=3.2e-24 Score=197.83 Aligned_cols=162 Identities=14% Similarity=0.030 Sum_probs=121.3
Q ss_pred ccCCCCCccccccc-CCCcccccccCCCCCchhhh----hh----hccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccc
Q 037143 34 VYNGQDPRISTFGQ-DVNAFTARETPLDPSTYKKK----NA----RRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWD 104 (382)
Q Consensus 34 ~~~G~TPLh~A~~~-~~~~~~~v~~Ll~~~~~~~~----~~----~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~ 104 (382)
|..|+||||+|+.. ..++.+++++|++.+++... .+ ..|..|+||||+|+..|+.+++++|++.+++ ++.
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-~~~ 129 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD-VQA 129 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTC
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCc
Confidence 56699999999932 24899999999998754210 01 1456899999999999999999999999887 566
Q ss_pred cCC--------------CCCcHHHHHHHcCCHHHHHHHHh---CCCccccccccccCCCCCHHHHHHhhCCCCccccCcc
Q 037143 105 LDP--------------AEKNILLLAIENRRTSVYNLLLS---RKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGA 167 (382)
Q Consensus 105 ~d~--------------~G~t~Lh~A~~~g~~~iv~~Ll~---~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~ 167 (382)
+|. .|+||||+|+..|+.+++++|++ .| ++++.+|.+|+||||+|+..|+...-.
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g----ad~~~~d~~g~tpLh~A~~~~~~~~~~---- 201 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQP----ADISARDSVGNTVLHALVEVADNTVDN---- 201 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCC----CCTTCCCTTSCCHHHHHHHHCCSCHHH----
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCC----CCceeeCCCCCcHHHHHHHccCcchhH----
Confidence 676 79999999999999999999999 77 799999999999999999988732210
Q ss_pred hhhhHHH-HHHHHHHHhhccc----cccccccCCCCCccccchhh
Q 037143 168 ALQVQWE-IKWFQHVKKLMPR----HFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 168 ~l~~~~~-~~~~~~v~~~~~~----~~~~~~N~~G~Tpldla~~~ 207 (382)
.....+ +++ .++..... ..++.+|++|.||+++|.+.
T Consensus 202 -~~~~~~~v~~--Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~ 243 (273)
T 2pnn_A 202 -TKFVTSMYNE--ILILGAKLHPTLKLEEITNRKGLTPLALAASS 243 (273)
T ss_dssp -HHHHHHHHHH--HHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred -HHHHHHHHHH--HHHhhhhcccccccccccCCCCCCHHHHHHHh
Confidence 000000 111 11111111 11246899999999999765
No 51
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.90 E-value=1.2e-24 Score=188.02 Aligned_cols=138 Identities=15% Similarity=0.065 Sum_probs=123.7
Q ss_pred HHHHHHHHHHcCCCCCCcccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHH
Q 037143 14 WAIQVLNELVDHRNPDQYKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKK 93 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~ 93 (382)
...++++.|+++++......|..|+||||+|+ ..++.+++++|++.+++. +..|..|+||||+|+..|+.+++++
T Consensus 16 g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~ 90 (179)
T 3f6q_A 16 GNAVAVRLWLDNTENDLNQGDDHGFSPLHWAC--REGRSAVVEMLIMRGARI---NVMNRGDDTPLHLAASHGHRDIVQK 90 (179)
T ss_dssp TCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHhcCcccccccCCCCCCHHHHHH--HcCcHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 45689999999865555556777999999999 779999999999998876 7778899999999999999999999
Q ss_pred HhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCc
Q 037143 94 ILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLP 161 (382)
Q Consensus 94 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~ 161 (382)
|++.+++ ++.+|..|+||||+|+..|+.+++++|++.| ++++.+|.+|+||||+|+..++.++
T Consensus 91 Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~tpl~~A~~~~~~~~ 153 (179)
T 3f6q_A 91 LLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVANG----ALVSICNKYGEMPVDKAKAPLRELL 153 (179)
T ss_dssp HHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCSSBCCTTSCCGGGGSCHHHHHHH
T ss_pred HHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHCC----CCcchhccCCCCcHHHHHHHHHHHH
Confidence 9999887 6788999999999999999999999999998 7999999999999999998776443
No 52
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.89 E-value=3.7e-24 Score=203.45 Aligned_cols=185 Identities=19% Similarity=0.143 Sum_probs=133.8
Q ss_pred HHHHHHHHHcCCCCCCccc-cc-CCCCCcccccccCCCcccccccCCCCCchhh--------------------------
Q 037143 15 AIQVLNELVDHRNPDQYKY-VY-NGQDPRISTFGQDVNAFTARETPLDPSTYKK-------------------------- 66 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~-~~-~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~-------------------------- 66 (382)
.+|+|++||++ |++.+. ++ .|+||||+|+ ..|+.+++++|+++|++..
T Consensus 37 ~~~~V~~LL~~--Gadvn~~~~~~g~TpLh~A~--~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (337)
T 4g8k_A 37 DVDLVQQLLEG--GANVNFQEEEGGWTPLHNAV--QMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFL 112 (337)
T ss_dssp CHHHHHHHHHH--TCCTTCCCTTTCCCHHHHHH--HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred CHHHHHHHHHC--CCCCCccCCCCCcCHHHHHH--HcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhh
Confidence 46899999999 676664 33 4999999999 7899999999999876531
Q ss_pred ----hhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCC---------ccccCCCCCcHHHHHHHcCCHHHHHHHHhC-C
Q 037143 67 ----KNARRSRRKETPILVAAKMGVTEMVKKILDTFPVA---------MWDLDPAEKNILLLAIENRRTSVYNLLLSR-K 132 (382)
Q Consensus 67 ----~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~---------~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~-~ 132 (382)
..+..|..|.||||+|+..|+.++++.|++.+++. ....+..|+||||+|++.|+.+++++|+++ |
T Consensus 113 ~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~g 192 (337)
T 4g8k_A 113 SKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMG 192 (337)
T ss_dssp TTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSC
T ss_pred hccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccC
Confidence 12456778999999999999999999999987652 123466799999999999999999999964 5
Q ss_pred CccccccccccCCCCCHHHHHHhhCCCC----cccc---Ccch-----------hhhHHHHHHHHHHHhhc--ccccccc
Q 037143 133 ALGQTIFWQVDNQGNSALHLAAKYGDHL----PLLF---PGAA-----------LQVQWEIKWFQHVKKLM--PRHFFTR 192 (382)
Q Consensus 133 ~~~~~~~~~~D~~G~TpLH~A~~~g~~~----~~~~---~~~~-----------l~~~~~~~~~~~v~~~~--~~~~~~~ 192 (382)
+++|.+|..|+||||.++..++.. ++++ .|+. +.........+.++... ...+++.
T Consensus 193 ----ad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~ 268 (337)
T 4g8k_A 193 ----ADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIND 268 (337)
T ss_dssp ----CCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTC
T ss_pred ----CCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccC
Confidence 788888888888888877665532 2111 1221 11111111222333222 2345788
Q ss_pred ccCCCCCccccchhh
Q 037143 193 YNDDGKTPDEVFTES 207 (382)
Q Consensus 193 ~N~~G~Tpldla~~~ 207 (382)
+|++|+|||++|.+.
T Consensus 269 ~d~~G~TpL~~A~~~ 283 (337)
T 4g8k_A 269 TDSDGKTALLLAVEL 283 (337)
T ss_dssp BCTTSCBHHHHHHHT
T ss_pred cCCCCCCHHHHHHHc
Confidence 899999999998765
No 53
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.89 E-value=2e-24 Score=201.08 Aligned_cols=178 Identities=15% Similarity=0.091 Sum_probs=127.9
Q ss_pred HHHHHHHHHcCCCCCCcccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHH
Q 037143 15 AIQVLNELVDHRNPDQYKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKI 94 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~L 94 (382)
+.++.++|.+. + ....|.+|+||||+|+ ..|+.+++++|++.+++. +.. +|+||||+|+..|+.+++++|
T Consensus 12 ~~~v~~lL~~~--~-~~~~d~~g~t~L~~A~--~~g~~~~v~~Ll~~g~~~---~~~--~g~t~L~~A~~~g~~~~v~~L 81 (285)
T 3kea_A 12 SKQLKSFLSSK--D-TFKADVHGHSASYYAI--ADNNVRLVCTLLNAGALK---NLL--ENEFPLHQAATLEDTKIVKIL 81 (285)
T ss_dssp HHHHHHHHHST--T-TTCCCTTSCCHHHHHH--HTTCHHHHHHHHHTTGGG---SCC--TTCCHHHHHTTSSSCHHHHHH
T ss_pred HHHHHHHHHhC--C-CCccCCCCCCHHHHHH--HcCCHHHHHHHHhCCCCC---CCC--CCCCHHHHHHHcCCHHHHHHH
Confidence 45566666655 2 3445666999999998 678888999998888765 443 488999999999999999999
Q ss_pred hhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCC-CCHHHHHHhhCCCCcccc---Ccc---
Q 037143 95 LDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQG-NSALHLAAKYGDHLPLLF---PGA--- 167 (382)
Q Consensus 95 l~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G-~TpLH~A~~~g~~~~~~~---~~~--- 167 (382)
++.+++ ++.+|..|+||||+|+..|+.+++++|++.| ++++.+|.+| .||||+|+..|+.++++. .|+
T Consensus 82 l~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g----a~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 156 (285)
T 3kea_A 82 LFSGLD-DSQFDDKGNTALYYAVDSGNMQTVKLFVKKN----WRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF 156 (285)
T ss_dssp HHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHC----GGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTC
T ss_pred HHCCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcC----CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccc
Confidence 988777 6678888999999999999999999999887 7888888888 799999998888766542 111
Q ss_pred -------hhhhHHHHHHHHHHHhhc-cccccccccCCCCCc-cccchhh
Q 037143 168 -------ALQVQWEIKWFQHVKKLM-PRHFFTRYNDDGKTP-DEVFTES 207 (382)
Q Consensus 168 -------~l~~~~~~~~~~~v~~~~-~~~~~~~~N~~G~Tp-ldla~~~ 207 (382)
++.........+.++... .+.+++.+|.+|.|| +++|.+.
T Consensus 157 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~ 205 (285)
T 3kea_A 157 DLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDN 205 (285)
T ss_dssp CCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHH
T ss_pred cccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHc
Confidence 111111111111222111 123467899999998 9998765
No 54
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.89 E-value=8.3e-24 Score=194.67 Aligned_cols=166 Identities=16% Similarity=0.105 Sum_probs=135.5
Q ss_pred HHHHHHHHHcCCCCCCcccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHH
Q 037143 15 AIQVLNELVDHRNPDQYKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKI 94 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~L 94 (382)
..+++++|+++++..+...+..|+||||+|+ ..++.+++++|++.+++. +..|..|.||||+|+..|+.+++++|
T Consensus 17 ~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~L 91 (285)
T 1wdy_A 17 DVDLVQQLLEGGANVNFQEEEGGWTPLHNAV--QMSREDIVELLLRHGADP---VLRKKNGATPFLLAAIAGSVKLLKLF 91 (285)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTTCCCHHHHHH--HTTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred CHHHHHHHHHcCCCcccccCCCCCcHHHHHH--HcCCHHHHHHHHHcCCCC---cccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4689999999944433333556999999999 779999999999998876 77788999999999999999999999
Q ss_pred hhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccc----------cCCCCCHHHHHHhhCCCCcccc
Q 037143 95 LDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQV----------DNQGNSALHLAAKYGDHLPLLF 164 (382)
Q Consensus 95 l~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~----------D~~G~TpLH~A~~~g~~~~~~~ 164 (382)
++.+++ ++..|..|+||||+|+..|+.+++++|++.+ .+++.+ |..|.||||.|+..|+.++++.
T Consensus 92 l~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 166 (285)
T 1wdy_A 92 LSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRG----ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKI 166 (285)
T ss_dssp HHTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTT----CCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHH
T ss_pred HHcCCC-CCccCcccCCHHHHHHHhCCHHHHHHHHHhC----CCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHH
Confidence 999887 6778999999999999999999999999998 566665 8899999999999998665421
Q ss_pred CcchhhhHHHHHHHHHHHhhccccccccccCCCCCccccchhh
Q 037143 165 PGAALQVQWEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 165 ~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~ 207 (382)
.++ ..+..++.+|..|.||++.+...
T Consensus 167 ---------------Ll~--~~~~~~~~~~~~g~t~l~~a~~~ 192 (285)
T 1wdy_A 167 ---------------LLD--EMGADVNACDNMGRNALIHALLS 192 (285)
T ss_dssp ---------------HHH--TSCCCTTCCCTTSCCHHHHHHHC
T ss_pred ---------------HHH--hcCCCCCccCCCCCCHHHHHHHc
Confidence 111 11233567777788888776543
No 55
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.89 E-value=6.3e-24 Score=205.31 Aligned_cols=173 Identities=12% Similarity=0.123 Sum_probs=134.5
Q ss_pred HHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcC---cHHH
Q 037143 15 AIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMG---VTEM 90 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g---~~~~ 90 (382)
..+++++|+++ +++.+. +..|+||||+|+ ..++.+++++|++.+......+..|..|.||||+|+..| +.++
T Consensus 178 ~~~iv~~Ll~~--ga~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~ 253 (373)
T 2fo1_E 178 RRRLVAYLMKA--GADPTIYNKSERSALHQAA--ANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVAS 253 (373)
T ss_dssp CHHHHHHHHHT--TCCSCCCCTTCCCHHHHHH--HTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHH
T ss_pred hHHHHHHHHHC--CCCCcccCCCCCCHHHHHH--HCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHH
Confidence 46799999998 666654 445999999999 678999999999886322223677888999999999988 8999
Q ss_pred HHHHhhhCCCCcc-------ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccc
Q 037143 91 VKKILDTFPVAMW-------DLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLL 163 (382)
Q Consensus 91 v~~Ll~~~~~~~~-------~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~ 163 (382)
+++|++.+.+... ..|..|+||||+|+..|+.+++++|++.+ .+++|.+|.+|+||||+|+..|+.++++
T Consensus 254 v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~---~~~~n~~d~~g~TpL~~A~~~g~~~iv~ 330 (373)
T 2fo1_E 254 AKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEK---GSNKDKQDEDGKTPIMLAAQEGRIEVVM 330 (373)
T ss_dssp HHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHS---CCCTTCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhc---CCCccCcCCCCCCHHHHHHHcCCHHHHH
Confidence 9999998876321 25778999999999999999999999876 2689999999999999999999866543
Q ss_pred cCcchhhhHHHHHHHHHHHhhccccccccccCCCCCccccchhh-hHHHH
Q 037143 164 FPGAALQVQWEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTES-HRDLV 212 (382)
Q Consensus 164 ~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~-~~~l~ 212 (382)
. .++. +.+++.+|.+|.||+++|.+. +.+++
T Consensus 331 ~---------------Ll~~---gad~~~~d~~g~t~l~~A~~~g~~~iv 362 (373)
T 2fo1_E 331 Y---------------LIQQ---GASVEAVDATDHTARQLAQANNHHNIV 362 (373)
T ss_dssp H---------------HHHT---TCCSSCCCSSSCCHHHHHHHTTCHHHH
T ss_pred H---------------HHHc---CCCccCCCCCCCCHHHHHHHcCCHHHH
Confidence 2 1222 334678999999999998765 44433
No 56
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.89 E-value=6.1e-24 Score=190.80 Aligned_cols=145 Identities=17% Similarity=0.106 Sum_probs=122.9
Q ss_pred CCCCCcccccccCCCcccccccCCCC-CchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCc----cccCCCCC
Q 037143 36 NGQDPRISTFGQDVNAFTARETPLDP-STYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAM----WDLDPAEK 110 (382)
Q Consensus 36 ~G~TPLh~A~~~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~----~~~d~~G~ 110 (382)
.|+||||+|+ ..|+.++++.|++. +.+. +..|..|+||||+|+..|+.+++++|++.+++.. +..|.+|+
T Consensus 2 ~g~t~L~~A~--~~g~~~~v~~Ll~~~g~~~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~ 76 (232)
T 2rfa_A 2 IWESPLLLAA--KENDVQALSKLLKFEGCEV---HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQ 76 (232)
T ss_dssp CTTCHHHHHH--HTTCHHHHHHHHTTTCSCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTC
T ss_pred CCCCHHHHHH--HcCCHHHHHHHHHhcCCCc---ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCc
Confidence 4899999999 78999999999987 7665 7788999999999999999999999999987632 45678999
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCccccccccccC-------------CCCCHHHHHHhhCCCCccccCcchhhhHHHHHH
Q 037143 111 NILLLAIENRRTSVYNLLLSRKALGQTIFWQVDN-------------QGNSALHLAAKYGDHLPLLFPGAALQVQWEIKW 177 (382)
Q Consensus 111 t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~-------------~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~ 177 (382)
||||+|+..|+.+++++|++.+ ++++.+|. +|+||||+|+..|+.++++.
T Consensus 77 t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~------------- 139 (232)
T 2rfa_A 77 TALHIAVINQNVNLVRALLARG----ASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRL------------- 139 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT----CCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHH-------------
T ss_pred CHHHHHHHcCCHHHHHHHHhCC----CCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHH-------------
Confidence 9999999999999999999998 67777665 79999999999999665432
Q ss_pred HHHHHhhccccccccccCCCCCccccchhh
Q 037143 178 FQHVKKLMPRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 178 ~~~v~~~~~~~~~~~~N~~G~Tpldla~~~ 207 (382)
.++. +.+++.+|.+|.||+++|...
T Consensus 140 --Ll~~---ga~~~~~d~~g~t~L~~A~~~ 164 (232)
T 2rfa_A 140 --LIEH---GADIRAQDSLGNTVLHILILQ 164 (232)
T ss_dssp --HHHT---TCCTTCCCTTSCCHHHHHHTC
T ss_pred --HHHC---CCCCCCCCCCCCCHHHHHHHc
Confidence 1222 334678999999999998765
No 57
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.89 E-value=1.7e-24 Score=189.23 Aligned_cols=136 Identities=18% Similarity=0.179 Sum_probs=122.7
Q ss_pred HHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHH
Q 037143 15 AIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKK 93 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~ 93 (382)
..+++++|+++ +.+.+. +..|+||||+|+ ..++.+++++|++.+++. +..|..|.||||+|+..|+.+++++
T Consensus 47 ~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~ 119 (192)
T 2rfm_A 47 MENAIDKLVEN--FDKLEDKDIEGSTALIWAV--KNNRLGIAEKLLSKGSNV---NTKDFSGKTPLMWSIIFGYSEMSYF 119 (192)
T ss_dssp CGGGHHHHHHH--HCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHHTCCT---TCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred CHHHHHHHHHh--ccccccccccCccHHHHHH--HcCCHHHHHHHHHCCCCC---CCCCCCCCcHHHHHHHcCCHHHHHH
Confidence 46889999998 555554 556999999999 779999999999988776 7778899999999999999999999
Q ss_pred HhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcc
Q 037143 94 ILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPL 162 (382)
Q Consensus 94 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~ 162 (382)
|++.+++ ++.+|..|+||||+|+..|+.+++++|++.| ++++.+|.+|+||||+|+..|+.+++
T Consensus 120 Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~t~l~~A~~~~~~~~v 183 (192)
T 2rfm_A 120 LLEHGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLELG----ADISARDLTGLTAEASARIFGRQEVI 183 (192)
T ss_dssp HHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT----CCTTCBCTTSCBHHHHHHHTTCHHHH
T ss_pred HHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC----CCCCCcCCCCCCHHHHHHHhCcHHHH
Confidence 9999887 6788999999999999999999999999998 79999999999999999999996654
No 58
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.89 E-value=1.7e-24 Score=183.56 Aligned_cols=144 Identities=19% Similarity=0.081 Sum_probs=124.2
Q ss_pred CCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHHH
Q 037143 36 NGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILLL 115 (382)
Q Consensus 36 ~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~ 115 (382)
+..||||.|+ ..|+.++++.|++.+.+. +..|..|+||||+|+. |+.+++++|++.+.+ ++.+|..|+||||+
T Consensus 4 ~~~~~L~~A~--~~g~~~~v~~Ll~~~~~~---~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 76 (162)
T 1ihb_A 4 PWGNELASAA--ARGDLEQLTSLLQNNVNV---NAQNGFGRTALQVMKL-GNPEIARRLLLRGAN-PDLKDRTGFAVIHD 76 (162)
T ss_dssp -CHHHHHHHH--HHTCHHHHHHHTTSCCCT---TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred hHhhHHHHHH--HcCCHHHHHHHHhCCCCc---cccCccCccHHHHHHc-CcHHHHHHHHHcCCC-CCCCCCCCCCHHHH
Confidence 4678999999 789999999999998776 7778899999999999 999999999999877 67789999999999
Q ss_pred HHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccccC
Q 037143 116 AIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYND 195 (382)
Q Consensus 116 A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~ 195 (382)
|+..|+.+++++|++.+ .+++.+|.+|+||||+|+..|+.++++. .++.. ...++.+|.
T Consensus 77 A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------Ll~~g--~~~~~~~~~ 135 (162)
T 1ihb_A 77 AARAGFLDTLQTLLEFQ----ADVNIEDNEGNLPLHLAAKEGHLRVVEF---------------LVKHT--ASNVGHRNH 135 (162)
T ss_dssp HHHHTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHTTCHHHHHH---------------HHHHS--CCCTTCCCT
T ss_pred HHHcCCHHHHHHHHHcC----CCCCCcCCCCCCHHHHHHHcCCHHHHHH---------------HHHcc--CCCCCCcCC
Confidence 99999999999999998 7999999999999999999998665421 12211 122468999
Q ss_pred CCCCccccchhh
Q 037143 196 DGKTPDEVFTES 207 (382)
Q Consensus 196 ~G~Tpldla~~~ 207 (382)
+|.||+++|...
T Consensus 136 ~g~t~l~~A~~~ 147 (162)
T 1ihb_A 136 KGDTACDLARLY 147 (162)
T ss_dssp TSCCHHHHHHHT
T ss_pred CCCcHHHHHHHc
Confidence 999999999765
No 59
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.89 E-value=1.3e-24 Score=182.96 Aligned_cols=143 Identities=12% Similarity=0.019 Sum_probs=123.0
Q ss_pred CCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHHHH
Q 037143 37 GQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILLLA 116 (382)
Q Consensus 37 G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A 116 (382)
+.||||.|+ ..|+.+++++|++.+.+. + .+..|.||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|
T Consensus 2 ~~~~L~~A~--~~g~~~~v~~Ll~~g~~~---~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A 74 (153)
T 1awc_B 2 LGKKLLEAA--RAGQDDEVRILMANGAPF---T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPLHMA 74 (153)
T ss_dssp HHHHHHHHH--HHTCHHHHHHHHHHTCCC---C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHH
T ss_pred ccHHHHHHH--HcCCHHHHHHHHHcCCCC---C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHH
Confidence 357999999 789999999999988754 3 477899999999999999999999998877 677899999999999
Q ss_pred HHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccccCC
Q 037143 117 IENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYNDD 196 (382)
Q Consensus 117 ~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~~ 196 (382)
+..|+.+++++|++.+ ++++.+|.+|+||||+|+..|+.++++. .++. +.+++.+|++
T Consensus 75 ~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------Ll~~---ga~~~~~~~~ 132 (153)
T 1awc_B 75 ASEGHANIVEVLLKHG----ADVNAKDMLKMTALHWATEHNHQEVVEL---------------LIKY---GADVHTQSKF 132 (153)
T ss_dssp HHHTCHHHHHHHHTTT----CCTTCCCTTSCCHHHHHHHTTCHHHHHH---------------HHHT---TCCTTCCCTT
T ss_pred HHcChHHHHHHHHHcC----CCCCCCCCCCCCHHHHHHHcCCHHHHHH---------------HHHc---CCCccccCCC
Confidence 9999999999999998 7999999999999999999998665431 1222 2345689999
Q ss_pred CCCccccchhhh
Q 037143 197 GKTPDEVFTESH 208 (382)
Q Consensus 197 G~Tpldla~~~~ 208 (382)
|.||+++|....
T Consensus 133 g~t~l~~A~~~~ 144 (153)
T 1awc_B 133 CKTAFDISIDNG 144 (153)
T ss_dssp SCCHHHHHHHTT
T ss_pred CCCHHHHHHHcC
Confidence 999999997653
No 60
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.89 E-value=1.2e-23 Score=193.51 Aligned_cols=181 Identities=19% Similarity=0.113 Sum_probs=129.7
Q ss_pred HHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHH
Q 037143 15 AIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKK 93 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~ 93 (382)
..+++++|+++ +.+.+. +.+|+||||+|+ ..++.+++++|++.+++. +..|..|.||||+|+..|+.+++++
T Consensus 51 ~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~~~~ 123 (285)
T 1wdy_A 51 REDIVELLLRH--GADPVLRKKNGATPFLLAA--IAGSVKLLKLFLSKGADV---NECDFYGFTAFMEAAVYGKVKALKF 123 (285)
T ss_dssp CHHHHHHHHHT--TCCTTCCCTTCCCHHHHHH--HHTCHHHHHHHHHTTCCT---TCBCTTCCBHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHc--CCCCcccCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCC---CccCcccCCHHHHHHHhCCHHHHHH
Confidence 36888999988 555554 455999999998 678889999998888765 6677888999999999999999999
Q ss_pred HhhhCCCCcccc----------CCCCCcHHHHHHHcCCHHHHHHHHhC-CCccccccccccCCCCCHHHHHHhhCCC---
Q 037143 94 ILDTFPVAMWDL----------DPAEKNILLLAIENRRTSVYNLLLSR-KALGQTIFWQVDNQGNSALHLAAKYGDH--- 159 (382)
Q Consensus 94 Ll~~~~~~~~~~----------d~~G~t~Lh~A~~~g~~~iv~~Ll~~-~~~~~~~~~~~D~~G~TpLH~A~~~g~~--- 159 (382)
|++.+++ ++.. +..|.||||+|+..|+.+++++|++. + .+++.+|..|+||||.|+..++.
T Consensus 124 Ll~~g~~-~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~----~~~~~~~~~g~t~l~~a~~~~~~~~~ 198 (285)
T 1wdy_A 124 LYKRGAN-VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMG----ADVNACDNMGRNALIHALLSSDDSDV 198 (285)
T ss_dssp HHHTTCC-TTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSC----CCTTCCCTTSCCHHHHHHHCSCTTTH
T ss_pred HHHhCCC-cccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcC----CCCCccCCCCCCHHHHHHHccccchH
Confidence 9888766 3333 67788999999999999999988887 5 68888888888888888888773
Q ss_pred -Ccccc---Cc-----------chhhhHHHHHHHHHHHhhc--cccccccccCCCCCccccchhh
Q 037143 160 -LPLLF---PG-----------AALQVQWEIKWFQHVKKLM--PRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 160 -~~~~~---~~-----------~~l~~~~~~~~~~~v~~~~--~~~~~~~~N~~G~Tpldla~~~ 207 (382)
++++. .| .+++........+.++... .+.+++.+|.+|.||+++|.+.
T Consensus 199 ~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~ 263 (285)
T 1wdy_A 199 EAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVEL 263 (285)
T ss_dssp HHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHc
Confidence 23221 11 1122211111122222222 2345678888889998888764
No 61
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.89 E-value=1e-23 Score=189.35 Aligned_cols=183 Identities=15% Similarity=0.024 Sum_probs=138.8
Q ss_pred HHHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHH
Q 037143 14 WAIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVK 92 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~ 92 (382)
...+++++|+++ +.+.+. +..|+||||+|+ ..++.+++++|++.+++.. ...+..|.||||+|+..|+.++++
T Consensus 20 g~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~~~~~~--~~~~~~~~t~L~~A~~~~~~~~v~ 93 (240)
T 3eu9_A 20 GIYERCRELVEA--GYDVRQPDKENVTLLHWAA--INNRIDLVKYYISKGAIVD--QLGGDLNSTPLHWATRQGHLSMVV 93 (240)
T ss_dssp TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHTTCCTT--CCBTTTTBCHHHHHHHHTCHHHHH
T ss_pred CChHHHHHHHHc--CCCcCCCCCCCCCHHHHHH--HhCCHHHHHHHHHcCCcch--hhcCCcCCChhHHHHHcCCHHHHH
Confidence 457899999998 566654 556999999999 7799999999999887642 334455999999999999999999
Q ss_pred HHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCC-CCcccc---Cc--
Q 037143 93 KILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGD-HLPLLF---PG-- 166 (382)
Q Consensus 93 ~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~-~~~~~~---~~-- 166 (382)
.|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.+ .+++.+|.+|+||||+|+..++ .+++++ .|
T Consensus 94 ~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~----~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~ 168 (240)
T 3eu9_A 94 QLMKYGAD-PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG----QDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVS 168 (240)
T ss_dssp HHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCC
T ss_pred HHHHcCCC-CcccCCCCCCHHHHHHHcCHHHHHHHHHhcC----CCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCC
Confidence 99999877 6778999999999999999999999999998 7899999999999999998776 444321 11
Q ss_pred ----------chhhhHHHHHHHHHHHhhc-cccccccccCCCCCccccchhh
Q 037143 167 ----------AALQVQWEIKWFQHVKKLM-PRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 167 ----------~~l~~~~~~~~~~~v~~~~-~~~~~~~~N~~G~Tpldla~~~ 207 (382)
.++.........+.++... .+.+++.+|.+|.||+++|.+.
T Consensus 169 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 220 (240)
T 3eu9_A 169 VNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQR 220 (240)
T ss_dssp TTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHT
T ss_pred cchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 1222221111112222211 1234567888888888888765
No 62
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.89 E-value=2.1e-24 Score=178.29 Aligned_cols=119 Identities=14% Similarity=0.012 Sum_probs=109.7
Q ss_pred cccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCC-CCc
Q 037143 33 YVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPA-EKN 111 (382)
Q Consensus 33 ~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~-G~t 111 (382)
.+..|+||||+|+ ..++.+++++|++.+.+. +.+|..|+||||+|+. |+.+++++|++.+++ ++.+|.. |+|
T Consensus 8 ~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~~g~t 80 (136)
T 1d9s_A 8 LGGSSDAGLATAA--ARGQVETVRQLLEAGADP---NALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-PNCADPATLTR 80 (136)
T ss_dssp CCCCCSCHHHHHH--HTTCHHHHHHHHHTTCCT---TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-SSCCBTTTTBC
T ss_pred CCCCCccHHHHHH--HcCCHHHHHHHHHcCCCc---CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-CCCcCCCCCCC
Confidence 4566999999999 789999999999998776 7778899999999999 999999999999887 6778998 999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcc
Q 037143 112 ILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPL 162 (382)
Q Consensus 112 ~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~ 162 (382)
|||+|+..|+.+++++|++.+ ++++.+|.+|+||||+|+..++.+++
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~g----a~~~~~d~~g~tpl~~A~~~~~~~~~ 127 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAG----ARLDVCDAWGRLPVDLAEEQGHRDIA 127 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTC----CCCCCCSSSSSCHHHHHHHHTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcC----CCCCccCCCCCCHHHHHHHcCCHHHH
Confidence 999999999999999999998 79999999999999999999986654
No 63
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=1.2e-24 Score=184.08 Aligned_cols=142 Identities=14% Similarity=-0.002 Sum_probs=106.2
Q ss_pred cccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCc-
Q 037143 33 YVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKN- 111 (382)
Q Consensus 33 ~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t- 111 (382)
.+..|.||||+|+ ..++.+++++|++.+++. +..|..|+||||+|+ .|+.+++++|++.+.+ ++.+|..|+|
T Consensus 8 ~~~~~~t~L~~A~--~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~~~d~~g~tt 80 (156)
T 1bi7_B 8 SMEPSADWLATAA--ARGRVEEVRALLEAGANP---NAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPATLTR 80 (156)
T ss_dssp --CCSTTHHHHHH--HHTCHHHHHHHHTTTCCT---TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTTTCCC
T ss_pred CCccchHHHHHHH--HcCCHHHHHHHHHcCCCC---CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-CCCcCCCCCcH
Confidence 3455999999999 779999999999988776 777889999999985 8999999999998877 6788999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccc
Q 037143 112 ILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFT 191 (382)
Q Consensus 112 ~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~ 191 (382)
|||+|+..|+.+++++|++.| ++++.+|.+|+||||+|+..|+.++++. .+ ..+..++
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~g----a~~~~~d~~g~tpl~~A~~~~~~~~v~~---------------Ll---~~ga~~~ 138 (156)
T 1bi7_B 81 PVHDAAREGFLDTLVVLHRAG----ARLDVRDAWGRLPVDLAEELGHRDVARY---------------LR---AAAGGTR 138 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHHT----CCSSCCCTTCCCHHHHHHHHTCHHHHHH---------------HS---SCC----
T ss_pred HHHHHHHCCCHHHHHHHHHcC----CCCcccCCCCCCHHHHHHHhCHHHHHHH---------------HH---HcCCCCC
Confidence 999999999999999999998 7899999999999999999998655421 11 1223456
Q ss_pred cccCCCCCcccc
Q 037143 192 RYNDDGKTPDEV 203 (382)
Q Consensus 192 ~~N~~G~Tpldl 203 (382)
.+|..|.||.+-
T Consensus 139 ~~~~~g~t~~~~ 150 (156)
T 1bi7_B 139 GSNHARIDAAEG 150 (156)
T ss_dssp ------------
T ss_pred ccCcCcCccccc
Confidence 888888888764
No 64
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.88 E-value=1.4e-24 Score=179.39 Aligned_cols=124 Identities=15% Similarity=0.020 Sum_probs=110.6
Q ss_pred CCcccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCC
Q 037143 29 DQYKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPA 108 (382)
Q Consensus 29 ~~~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~ 108 (382)
.+...|.+|+||||+|+ ..++.+++++|++.+++. +..|..|+||||+|+..|+.+++++|++.+.+ ++.+|..
T Consensus 2 ~d~~~~~~g~t~L~~A~--~~~~~~~~~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~ 75 (137)
T 3c5r_A 2 IDPFTNHRGETLLHIAS--IKGDIPSVEYLLQNGSDP---NVKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTTGYQ 75 (137)
T ss_dssp --CCCCTTCCCHHHHHH--HHTCHHHHHHHHHTTCCS---CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCGG
T ss_pred CCCCcCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCC---CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCcCCC
Confidence 34456777999999999 779999999999998776 77788999999999999999999999999877 6778999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcc
Q 037143 109 EKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPL 162 (382)
Q Consensus 109 G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~ 162 (382)
|+||||+|+..|+.+++++|++.| ++++.+|.+|+||||+|+..+..+++
T Consensus 76 g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~tpl~~A~~~~~~~~l 125 (137)
T 3c5r_A 76 NDSPLHDAAKNGHVDIVKLLLSYG----ASRNAVNIFGLRPVDYTDDESMKSLL 125 (137)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCGGGGCCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC----CCCCCCCCCCCCHHHHHhhccHHHHH
Confidence 999999999999999999999998 79999999999999999887764443
No 65
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.88 E-value=7.4e-24 Score=178.55 Aligned_cols=141 Identities=16% Similarity=0.104 Sum_probs=121.6
Q ss_pred CCCCcccccccCCCcccccccCCCCC-chhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHHH
Q 037143 37 GQDPRISTFGQDVNAFTARETPLDPS-TYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILLL 115 (382)
Q Consensus 37 G~TPLh~A~~~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~ 115 (382)
|.||||.|+ ..|+.++++.|++.. .+. +..|..|+||||+ |..|+.+++++|++.+++ ++.+|..|+||||+
T Consensus 2 ~~~~L~~A~--~~g~~~~v~~ll~~~~~~~---~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~ 74 (156)
T 1bd8_A 2 AGDRLSGAA--ARGDVQEVRRLLHRELVHP---DALNRFGKTALQV-MMFGSTAIALELLKQGAS-PNVQDTSGTSPVHD 74 (156)
T ss_dssp HHHHHHHHH--HHTCHHHHHHHHHTTCCCT---TCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred cchHHHHHH--HhCCHHHHHHHHHhhCcCc---cccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHH
Confidence 568999999 789999999999772 133 6778899999999 999999999999999877 67889999999999
Q ss_pred HHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccccC
Q 037143 116 AIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYND 195 (382)
Q Consensus 116 A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~ 195 (382)
|+..|+.+++++|++.| ++++.+|.+|+||||+|+..|+.++++. .++. .+++.+|.
T Consensus 75 A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~L~~A~~~~~~~~v~~---------------Ll~~----~~~~~~~~ 131 (156)
T 1bd8_A 75 AARTGFLDTLKVLVEHG----ADVNVPDGTGALPIHLAVQEGHTAVVSF---------------LAAE----SDLHRRDA 131 (156)
T ss_dssp HHHTTCHHHHHHHHHTT----CCSCCCCTTSCCHHHHHHHHTCHHHHHH---------------HHTT----SCTTCCCT
T ss_pred HHHcCcHHHHHHHHHcC----CCCCCcCCCCCcHHHHHHHhChHHHHHH---------------HHhc----cCCCCcCC
Confidence 99999999999999998 7999999999999999999998655421 1111 44678999
Q ss_pred CCCCccccchhh
Q 037143 196 DGKTPDEVFTES 207 (382)
Q Consensus 196 ~G~Tpldla~~~ 207 (382)
+|.||+++|.+.
T Consensus 132 ~g~t~l~~A~~~ 143 (156)
T 1bd8_A 132 RGLTPLELALQR 143 (156)
T ss_dssp TSCCHHHHHHHS
T ss_pred CCCCHHHHHHHc
Confidence 999999999765
No 66
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.88 E-value=1.8e-23 Score=183.34 Aligned_cols=137 Identities=17% Similarity=0.123 Sum_probs=122.0
Q ss_pred HHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCC-CCCchhhhhhhccCCCCcHHHHHHHcCcHHHHH
Q 037143 15 AIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPL-DPSTYKKKNARRSRRKETPILVAAKMGVTEMVK 92 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~ 92 (382)
..+++++|+++ +.+.+. +..|+||||+|+ ..++.+++++|+ +.+.+. +..|..|.||||+|+..|+.++++
T Consensus 51 ~~~~v~~Ll~~--g~~~~~~~~~g~t~l~~A~--~~~~~~~~~~Ll~~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~ 123 (201)
T 3hra_A 51 DIEIAKALIDR--GADINLQNSISDSPYLYAG--AQGRTEILAYMLKHATPDL---NKHNRYGGNALIPAAEKGHIDNVK 123 (201)
T ss_dssp CHHHHHHHHHT--TCCTTCCCTTSCCHHHHHH--HTTCHHHHHHHHHHSCCCT---TCCCTTSCCSHHHHHHTTCHHHHH
T ss_pred CHHHHHHHHHc--CCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHhccCccc---ccccCCCCcHHHHHHHcCCHHHHH
Confidence 47899999999 777665 455999999999 779999999999 455444 777889999999999999999999
Q ss_pred HHhhhCCCCccccCCCCCcHHHHHHHcCC-----HHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcc
Q 037143 93 KILDTFPVAMWDLDPAEKNILLLAIENRR-----TSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPL 162 (382)
Q Consensus 93 ~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~-----~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~ 162 (382)
+|++.++..++.+|..|+||||+|+..++ .+++++|++.| ++++.+|.+|+||||+|+..|+.+++
T Consensus 124 ~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~g----a~~~~~~~~g~t~l~~A~~~~~~~~~ 194 (201)
T 3hra_A 124 LLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENG----ADQSIKDNSGRTAMDYANQKGYTEIS 194 (201)
T ss_dssp HHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCC----CCCCccCCCCCCHHHHHHHcCCHhHH
Confidence 99999855588899999999999999998 99999999999 79999999999999999999996654
No 67
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.88 E-value=5.6e-25 Score=198.55 Aligned_cols=179 Identities=8% Similarity=-0.061 Sum_probs=125.8
Q ss_pred HHHHHcCCCCCCc--ccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhh
Q 037143 19 LNELVDHRNPDQY--KYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILD 96 (382)
Q Consensus 19 v~~Ll~~~~~~~~--~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~ 96 (382)
++.||+++..... ..+.+|.||||+|+ ..|+.+++++|++.+++. +..|..|+||||+||..|+.+++++|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~--~~g~~~~v~~Ll~~g~~~---~~~d~~g~tpLh~A~~~g~~~~v~~Ll~ 75 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAA--LTGELEVVQQAVKEMNDP---SQPNEEGITALHNAICGANYSIVDFLIT 75 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHH--HHTCHHHHHHHHHHSSCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CeehhccCCCCccccccccchhHHHHHHH--HcCCHHHHHHHHhcCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4567777332222 23344888999999 779999999999888766 7778899999999999999999999999
Q ss_pred hCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCcccccccccc-CCCCCHHHHH--HhhCCCCcccc---Ccchhh
Q 037143 97 TFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVD-NQGNSALHLA--AKYGDHLPLLF---PGAALQ 170 (382)
Q Consensus 97 ~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D-~~G~TpLH~A--~~~g~~~~~~~---~~~~l~ 170 (382)
.+++ ++.+|..|+||||+|+..|+.+++++|++.| ++++.+| .+|+||||+| +..|+.++++. .|+...
T Consensus 76 ~ga~-~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g----a~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~ 150 (229)
T 2vge_A 76 AGAN-VNSPDSHGWTPLHCAASCNDTVICMALVQHG----AAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMG 150 (229)
T ss_dssp TTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT----CCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTT
T ss_pred CCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcc
Confidence 9877 6778999999999999999999999999998 7898887 5999999999 88888776652 111111
Q ss_pred hHHHHHH-----------HHHHHhhccccccccccCCCCCccccchhh
Q 037143 171 VQWEIKW-----------FQHVKKLMPRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 171 ~~~~~~~-----------~~~v~~~~~~~~~~~~N~~G~Tpldla~~~ 207 (382)
....-.. .+.+...-....++.+|.+|.||+++|...
T Consensus 151 ~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~ 198 (229)
T 2vge_A 151 LMNSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEETDWWWAALH 198 (229)
T ss_dssp TSGGGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCSSEEEEEET
T ss_pred cccCCchHHHHHHhhccccccCccccccccccccCCCcccHHHHHHHc
Confidence 1100000 000000001112567899999999999765
No 68
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.88 E-value=2.6e-23 Score=204.49 Aligned_cols=180 Identities=19% Similarity=0.131 Sum_probs=106.8
Q ss_pred HHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHH
Q 037143 16 IQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKI 94 (382)
Q Consensus 16 ~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~L 94 (382)
.+++++|+++ +.+.+. +..|+||||+|+ ..++.+++++|++.+.+. +..+..|.||||+|+..|+.++++.|
T Consensus 159 ~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~~~~L 231 (437)
T 1n11_A 159 VRVAELLLER--DAHPNAAGKNGLTPLHVAV--HHNNLDIVKLLLPRGGSP---HSPAWNGYTPLHIAAKQNQVEVARSL 231 (437)
T ss_dssp HHHHHHHHHT--TCCTTCCCSSCCCHHHHHH--HTTCHHHHHHHGGGTCCS---CCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHhC--CCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHhCCCCC---CCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 5677777776 544443 334777777777 567777777777766554 44555666777777777777777777
Q ss_pred hhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcccc---Cc-----
Q 037143 95 LDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLF---PG----- 166 (382)
Q Consensus 95 l~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~---~~----- 166 (382)
++.+.+ ++..|..|+||||+|+..|+.+++++|++.+ ++++.+|..|+||||+|+..|+.++++. .|
T Consensus 232 l~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~----~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 306 (437)
T 1n11_A 232 LQYGGS-ANAESVQGVTPLHLAAQEGHAEMVALLLSKQ----ANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA 306 (437)
T ss_dssp HHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT----CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC
T ss_pred HHcCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcC----CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCC
Confidence 666555 4555666666666666666666666666665 4566666666666666666666544331 00
Q ss_pred ------chhhhHHHHHHHHHHHhhc-cccccccccCCCCCccccchhh
Q 037143 167 ------AALQVQWEIKWFQHVKKLM-PRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 167 ------~~l~~~~~~~~~~~v~~~~-~~~~~~~~N~~G~Tpldla~~~ 207 (382)
.++.........+.++... ...+++.+|+.|.||+++|...
T Consensus 307 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~ 354 (437)
T 1n11_A 307 TTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQ 354 (437)
T ss_dssp CCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHC
Confidence 1111111100011111111 1334678899999999998765
No 69
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.88 E-value=1.9e-23 Score=194.55 Aligned_cols=102 Identities=17% Similarity=0.072 Sum_probs=75.7
Q ss_pred CCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHH
Q 037143 49 VNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLL 128 (382)
Q Consensus 49 ~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~L 128 (382)
.+..++.++|.+.+ . +.+|..|+||||+|+..|+.+++++|++.+++ ++.. +|+||||+|+..|+.+++++|
T Consensus 10 ~~~~~v~~lL~~~~--~---~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~--~g~t~L~~A~~~g~~~~v~~L 81 (285)
T 3kea_A 10 WKSKQLKSFLSSKD--T---FKADVHGHSASYYAIADNNVRLVCTLLNAGAL-KNLL--ENEFPLHQAATLEDTKIVKIL 81 (285)
T ss_dssp CCHHHHHHHHHSTT--T---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGG-GSCC--TTCCHHHHHTTSSSCHHHHHH
T ss_pred cCHHHHHHHHHhCC--C---CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCCC--CCCCHHHHHHHcCCHHHHHHH
Confidence 34555666666553 2 56677788888888888888888888887665 3433 478888888888888888888
Q ss_pred HhCCCccccccccccCCCCCHHHHHHhhCCCCcc
Q 037143 129 LSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPL 162 (382)
Q Consensus 129 l~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~ 162 (382)
++.| ++++.+|.+|+||||+|+..|+.+++
T Consensus 82 l~~g----a~~~~~d~~g~t~L~~A~~~g~~~~v 111 (285)
T 3kea_A 82 LFSG----LDDSQFDDKGNTALYYAVDSGNMQTV 111 (285)
T ss_dssp HHTT----CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHCC----CCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 8887 67888888888888888888875554
No 70
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.88 E-value=3.4e-23 Score=191.96 Aligned_cols=140 Identities=20% Similarity=0.184 Sum_probs=121.2
Q ss_pred HHHHHHHHHcCCCCCCcccccCCCCCccccccc---CCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHH
Q 037143 15 AIQVLNELVDHRNPDQYKYVYNGQDPRISTFGQ---DVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMV 91 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~~~~G~TPLh~A~~~---~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v 91 (382)
..+++++|++++.......+..|+||||+|+.. ..++.+++++|++.+... +..+..|+||||+|+..|+.+++
T Consensus 123 ~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~---~~~~~~g~tpLh~A~~~g~~~~v 199 (276)
T 4hbd_A 123 NFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN---AKASQAGQTALMLAVSHGRVDVV 199 (276)
T ss_dssp CHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT---CCCTTTCCCHHHHHHHTTCHHHH
T ss_pred CHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc---cccCCCCCCHHHHHHHcCCHHHH
Confidence 468999999994323334566699999999842 347888999999888654 66677899999999999999999
Q ss_pred HHHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHh-CCCccccccccccCCCCCHHHHHHhhCCCCcc
Q 037143 92 KKILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLS-RKALGQTIFWQVDNQGNSALHLAAKYGDHLPL 162 (382)
Q Consensus 92 ~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~-~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~ 162 (382)
++|++.+++ ++.+|.+|+||||+|+..|+.+++++|++ .| ++++.+|.+|+||||+|+..|+.+++
T Consensus 200 ~~Ll~~gad-~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g----ad~~~~d~~g~TpL~~A~~~g~~~iv 266 (276)
T 4hbd_A 200 KALLACEAD-VNVQDDDGSTALMCACEHGHKEIAGLLLAVPS----CDISLTDRDGSTALMVALDAGQSEIA 266 (276)
T ss_dssp HHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTT----CCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCC----CCCcCcCCCCCCHHHHHHHcCCHHHH
Confidence 999999887 78899999999999999999999999999 66 79999999999999999999997664
No 71
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.88 E-value=7.2e-24 Score=193.48 Aligned_cols=138 Identities=17% Similarity=0.149 Sum_probs=119.5
Q ss_pred HHHHHHHHHHcCCCCCCcc------------cccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCC-------
Q 037143 14 WAIQVLNELVDHRNPDQYK------------YVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRR------- 74 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~------------~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~------- 74 (382)
...+++++|+++ +.+.+ .|..|+||||+|+ ..++.+++++|++.+++. +..+..
T Consensus 57 g~~~~v~~Ll~~--g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~--~~g~~~~v~~Ll~~ga~~---~~~~~~~~~~~~~ 129 (256)
T 2etb_A 57 GVNACIMPLLQI--DKDSGNPKPLVNAQCTDEFYQGHSALHIAI--EKRSLQCVKLLVENGADV---HLRACGRFFQKHQ 129 (256)
T ss_dssp TBCTTHHHHHHH--HHHTTCSSCGGGCCCCSTTTTTCCHHHHHH--HTTCHHHHHHHHHTTCCT---TCCCCSGGGSCCS
T ss_pred chHHHHHHHHhc--CCcccchhhhcccccccccccCCCHHHHHH--HcCCHHHHHHHHHcCCCC---Ccccccccccccc
Confidence 345789999988 43332 2345999999999 779999999999998876 555654
Q ss_pred ------CCcHHHHHHHcCcHHHHHHHhh---hCCCCccccCCCCCcHHHHHHH--cCCHH-------HHHHHHhCCCccc
Q 037143 75 ------KETPILVAAKMGVTEMVKKILD---TFPVAMWDLDPAEKNILLLAIE--NRRTS-------VYNLLLSRKALGQ 136 (382)
Q Consensus 75 ------g~tpLh~Aa~~g~~~~v~~Ll~---~~~~~~~~~d~~G~t~Lh~A~~--~g~~~-------iv~~Ll~~~~~~~ 136 (382)
|.||||+|+..|+.+++++|++ .+.+ ++.+|.+|+||||+|+. .++.+ ++++|++.|
T Consensus 130 ~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g---- 204 (256)
T 2etb_A 130 GTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS-LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG---- 204 (256)
T ss_dssp SSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH----
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC-cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC----
Confidence 9999999999999999999999 6766 78899999999999999 88888 999999998
Q ss_pred ccc-------ccccCCCCCHHHHHHhhCCCCccc
Q 037143 137 TIF-------WQVDNQGNSALHLAAKYGDHLPLL 163 (382)
Q Consensus 137 ~~~-------~~~D~~G~TpLH~A~~~g~~~~~~ 163 (382)
+++ +.+|.+|+||||+|+..|+.++++
T Consensus 205 a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~ 238 (256)
T 2etb_A 205 ARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFR 238 (256)
T ss_dssp HHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCcccccccccccCCCCCCHHHHHHHhCCHHHHH
Confidence 788 999999999999999999977653
No 72
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.87 E-value=5e-23 Score=186.57 Aligned_cols=141 Identities=14% Similarity=0.028 Sum_probs=93.1
Q ss_pred cCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHH
Q 037143 35 YNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILL 114 (382)
Q Consensus 35 ~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh 114 (382)
..|.||||.|+ ..+..+.++.|+++|++. +. +..|.||||.|+..|+.++++.|++.+++ ++.+|..|+||||
T Consensus 3 ~~g~t~L~~a~--~~~~~~~~~~ll~~g~~~---~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~ 75 (239)
T 1ycs_B 3 ITGQVSLPPGK--RTNLRKTGSERIAHGMRV---KF-NPLPLALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDEGITALH 75 (239)
T ss_dssp ----------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-CCCCCTTSCCHHH
T ss_pred ccccccCchhh--hhhhHHHHHHHhccCCCc---cc-CchhhHHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHH
Confidence 45999999999 779999999999999875 33 45689999999999999999999999886 7888999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhcccccccccc
Q 037143 115 LAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYN 194 (382)
Q Consensus 115 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N 194 (382)
+|+..|+.+++++|++.| +++|.+|.+|+||||+|+..|+.+++++ .++. ..+++.+|
T Consensus 76 ~A~~~g~~~~v~~Ll~~g----a~~~~~d~~g~tpL~~A~~~~~~~~v~~---------------Ll~~---ga~~~~~~ 133 (239)
T 1ycs_B 76 NAVCAGHTEIVKFLVQFG----VNVNAADSDGWTPLHCAASCNNVQVCKF---------------LVES---GAAVFAMT 133 (239)
T ss_dssp HHHHHTCHHHHHHHHHHT----CCTTCCCTTCCCHHHHHHHTTCHHHHHH---------------HHHT---TCCTTCCC
T ss_pred HHHHcCCHHHHHHHHHcC----CCCCccCCCCCCHHHHHHHcCCHHHHHH---------------HHHc---CCCcceec
Confidence 999999999999999998 7999999999999999999999665432 1222 23356777
Q ss_pred CCCC-Cccccc
Q 037143 195 DDGK-TPDEVF 204 (382)
Q Consensus 195 ~~G~-Tpldla 204 (382)
..|. ||++++
T Consensus 134 ~~~~~t~l~~a 144 (239)
T 1ycs_B 134 YSDMQTAADKC 144 (239)
T ss_dssp SSSCCCHHHHC
T ss_pred CCCCcchHHHH
Confidence 7776 999998
No 73
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=1.1e-23 Score=173.81 Aligned_cols=119 Identities=14% Similarity=0.069 Sum_probs=109.1
Q ss_pred ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHH
Q 037143 34 VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNIL 113 (382)
Q Consensus 34 ~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~L 113 (382)
...|.||||+|+ ..|+.+++++|++.+.+. +..|..|+||||+|+..|+.+++++|++.+++ ++.+|.+|+|||
T Consensus 11 ~~~~~t~l~~A~--~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L 84 (136)
T 2jab_A 11 GSDLGKKLLEAA--RAGQDDEVRILMANGADV---NAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAIGFTPL 84 (136)
T ss_dssp -CHHHHHHHHHH--HHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHH
T ss_pred cccccHHHHHHH--HhCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHH
Confidence 344999999999 789999999999998776 77788999999999999999999999999877 677899999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcc
Q 037143 114 LLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPL 162 (382)
Q Consensus 114 h~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~ 162 (382)
|+|+..|+.+++++|++.+ ++++.+|.+|+||||+|+..|+.+++
T Consensus 85 ~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~tpl~~A~~~~~~~~~ 129 (136)
T 2jab_A 85 HLAAFIGHLEIAEVLLKHG----ADVNAQDKFGKTAFDISIGNGNEDLA 129 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcC----CCCcCcCCCCCCHHHHHHHCCCHHHH
Confidence 9999999999999999998 78999999999999999999986654
No 74
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.87 E-value=1.7e-22 Score=181.28 Aligned_cols=123 Identities=14% Similarity=0.046 Sum_probs=111.6
Q ss_pred ccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCc
Q 037143 32 KYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKN 111 (382)
Q Consensus 32 ~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t 111 (382)
..|+.|.||||.|+ ..|+.++++.|++.+.+. +..+..|.||||+|+..|+.+++++|++.+++.....+..|+|
T Consensus 4 ~~d~~~~~~l~~A~--~~g~~~~~~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t 78 (240)
T 3eu9_A 4 HIDDYSTWDIVKAT--QYGIYERCRELVEAGYDV---RQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNST 78 (240)
T ss_dssp CCSCGGGCCHHHHH--HTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBC
T ss_pred ccccccchHHHHHH--HcCChHHHHHHHHcCCCc---CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCC
Confidence 35677999999999 789999999999998776 7778899999999999999999999999998866666677999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccc
Q 037143 112 ILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLL 163 (382)
Q Consensus 112 ~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~ 163 (382)
|||+|+..|+.+++++|++.+ ++++.+|..|.||||.|+..|+.++++
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~g----~~~~~~~~~g~t~l~~A~~~~~~~~~~ 126 (240)
T 3eu9_A 79 PLHWATRQGHLSMVVQLMKYG----ADPSLIDGEGCSCIHLAAQFGHTSIVA 126 (240)
T ss_dssp HHHHHHHHTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred hhHHHHHcCCHHHHHHHHHcC----CCCcccCCCCCCHHHHHHHcCHHHHHH
Confidence 999999999999999999998 789999999999999999999977654
No 75
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.87 E-value=1.8e-23 Score=192.78 Aligned_cols=140 Identities=20% Similarity=0.163 Sum_probs=118.4
Q ss_pred HHHHHHHHHHcCCCCC-------C---cccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccC----------
Q 037143 14 WAIQVLNELVDHRNPD-------Q---YKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSR---------- 73 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~-------~---~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~---------- 73 (382)
...+++++|++++... + ...|..|+||||+|+ ..++.+++++|++.+++. +..+.
T Consensus 68 g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~--~~g~~~~v~~Ll~~ga~~---~~~~~~~~~~~~~~~ 142 (273)
T 2pnn_A 68 GQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAI--ERRNMTLVTLLVENGADV---QAAANGDFFKKTKGR 142 (273)
T ss_dssp TBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHH--HTTCHHHHHHHHHTTCCT---TCCBCSGGGSSCSSS
T ss_pred CChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHH--HcCCHHHHHHHHHCCCCc---Ccccccccccccccc
Confidence 3468999999983211 1 113456999999999 789999999999998876 55555
Q ss_pred ----CCCcHHHHHHHcCcHHHHHHHhh---hCCCCccccCCCCCcHHHHHHHcCC---------HHHHHHHHhCCCcccc
Q 037143 74 ----RKETPILVAAKMGVTEMVKKILD---TFPVAMWDLDPAEKNILLLAIENRR---------TSVYNLLLSRKALGQT 137 (382)
Q Consensus 74 ----~g~tpLh~Aa~~g~~~~v~~Ll~---~~~~~~~~~d~~G~t~Lh~A~~~g~---------~~iv~~Ll~~~~~~~~ 137 (382)
.|.||||+|+..|+.+++++|++ .+.+ ++.+|.+|+||||+|+..|+ .+++++|++.| +
T Consensus 143 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad-~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g----a 217 (273)
T 2pnn_A 143 PGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD-ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILG----A 217 (273)
T ss_dssp CCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH----H
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC-ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhh----h
Confidence 79999999999999999999999 6666 78899999999999999998 79999999998 6
Q ss_pred ccc-------cccCCCCCHHHHHHhhCCCCccc
Q 037143 138 IFW-------QVDNQGNSALHLAAKYGDHLPLL 163 (382)
Q Consensus 138 ~~~-------~~D~~G~TpLH~A~~~g~~~~~~ 163 (382)
++| .+|.+|+||||+|+..|+.++++
T Consensus 218 ~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~ 250 (273)
T 2pnn_A 218 KLHPTLKLEEITNRKGLTPLALAASSGKIGVLA 250 (273)
T ss_dssp HHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred hcccccccccccCCCCCCHHHHHHHhChHHHHH
Confidence 775 59999999999999999976653
No 76
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.87 E-value=3.8e-24 Score=193.09 Aligned_cols=126 Identities=21% Similarity=0.152 Sum_probs=96.1
Q ss_pred ccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCcc
Q 037143 56 ETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALG 135 (382)
Q Consensus 56 ~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~ 135 (382)
+.|++.+++....+..+..|.||||.||..|+.++++.|++.+++ ++.+|.+|+||||+|+..|+.+++++|++.|
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g--- 77 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITAG--- 77 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT---
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC---
Confidence 456666665544455566788999999999999999999998877 6778999999999999999999999999998
Q ss_pred ccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhcccccccccc-CCCCCccccc
Q 037143 136 QTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYN-DDGKTPDEVF 204 (382)
Q Consensus 136 ~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N-~~G~Tpldla 204 (382)
+++|.+|.+|+||||+|+..|+.++++. .++. ..+++.++ .+|.||+++|
T Consensus 78 -a~~n~~d~~g~tpLh~A~~~g~~~~v~~---------------Ll~~---ga~~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 78 -ANVNSPDSHGWTPLHCAASCNDTVICMA---------------LVQH---GAAIFATTLSDGATAFEKC 128 (229)
T ss_dssp -CCTTCCCTTCCCHHHHHHHTTCHHHHHH---------------HHTT---TCCTTCCCSSTTCCTGGGC
T ss_pred -CCCCCCCCCCCCHHHHHHHcCCHHHHHH---------------HHHc---CCCcccccCCCCCCHHHHH
Confidence 7899999999999999999999887642 2222 22344654 6899999998
No 77
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.87 E-value=5.7e-24 Score=185.83 Aligned_cols=136 Identities=15% Similarity=0.103 Sum_probs=114.5
Q ss_pred HHHHHHHHcCCCCCCcccccCCCCCcccccccCCCc----ccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCc----
Q 037143 16 IQVLNELVDHRNPDQYKYVYNGQDPRISTFGQDVNA----FTARETPLDPSTYKKKNARRSRRKETPILVAAKMGV---- 87 (382)
Q Consensus 16 ~eiv~~Ll~~~~~~~~~~~~~G~TPLh~A~~~~~~~----~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~---- 87 (382)
.+.++.+++. +.+...+..|+||||+|+ ..++ .+++++|++.|++. +.+|..|+||||+|+..|+
T Consensus 19 ~~~~~~l~~~--~~~~~~~~~g~T~Lh~A~--~~~~~~~~~~iv~~Ll~~Gadv---n~~d~~g~TpLh~a~~~~~~~~~ 91 (186)
T 3t8k_A 19 YEDFLELFEK--GYEDKESVLKSNILYDVL--RNNNDEARYKISMFLINKGADI---KSRTKEGTTLFFPLFQGGGNDIT 91 (186)
T ss_dssp HHHHHHHHHH--SSSCHHHHHTTTHHHHHT--TCSCHHHHHHHHHHHHHTTCCS---SCCCTTCCCTHHHHHHHCTTCHH
T ss_pred HHHHHHHHhc--CcccccccCCCCHHHHHH--HcCCcchHHHHHHHHHHCCCCC---CCCCCCCCcHHHHHHHcCCcchh
Confidence 4567778876 443333356999999999 5565 35899999999887 8889999999999999987
Q ss_pred --HHHHHHHhhhCCCCccccCCCCC-cHHHHHHHcC-----CHHHHHHHHh-CCCccccccccccCCCCCHHHHHHhhCC
Q 037143 88 --TEMVKKILDTFPVAMWDLDPAEK-NILLLAIENR-----RTSVYNLLLS-RKALGQTIFWQVDNQGNSALHLAAKYGD 158 (382)
Q Consensus 88 --~~~v~~Ll~~~~~~~~~~d~~G~-t~Lh~A~~~g-----~~~iv~~Ll~-~~~~~~~~~~~~D~~G~TpLH~A~~~g~ 158 (382)
.+++++|++.+.+ ++.+|..|+ ||||+|+..+ +.+++++|++ .| ++++.+|.+|+||||+|+..|+
T Consensus 92 ~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~g----ad~~~~d~~G~TpL~~A~~~~~ 166 (186)
T 3t8k_A 92 GTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSG----LQLLIKDKWGLTALEFVKRCQK 166 (186)
T ss_dssp HHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTT----CCTTCCCTTSCCHHHHHHTTTC
T ss_pred hHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcC----CCCcccCCCCCCHHHHHHHcCC
Confidence 6889999999988 788999999 9999999955 3569999999 77 8999999999999999999998
Q ss_pred CCccc
Q 037143 159 HLPLL 163 (382)
Q Consensus 159 ~~~~~ 163 (382)
.++++
T Consensus 167 ~~~v~ 171 (186)
T 3t8k_A 167 PIALK 171 (186)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 78
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.87 E-value=1.5e-23 Score=191.76 Aligned_cols=139 Identities=19% Similarity=0.189 Sum_probs=118.2
Q ss_pred HHHHHHHHHcCCCC---------CCc-ccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhcc------------
Q 037143 15 AIQVLNELVDHRNP---------DQY-KYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRS------------ 72 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~---------~~~-~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~------------ 72 (382)
..+++++|++++.. ... ..|..|+||||+|+ ..++.+++++|++.+++. +..+
T Consensus 61 ~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~--~~g~~~~v~~Ll~~ga~~---~~~~~~~~~~~~~~~~ 135 (260)
T 3jxi_A 61 RNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAI--ERRCKHYVELLVEKGADV---HAQARGRFFQPKDEGG 135 (260)
T ss_dssp BCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHH--HTTCHHHHHHHHHTTCCT---TCCCEECCCSSSCCCC
T ss_pred CHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHH--HcCCHHHHHHHHhCCCCc---CccccccccCcccccc
Confidence 36899999987311 112 22346999999999 789999999999999876 5555
Q ss_pred --CCCCcHHHHHHHcCcHHHHHHHhh---hCCCCccccCCCCCcHHHHHHHcCC---------HHHHHHHHhCCCccccc
Q 037143 73 --RRKETPILVAAKMGVTEMVKKILD---TFPVAMWDLDPAEKNILLLAIENRR---------TSVYNLLLSRKALGQTI 138 (382)
Q Consensus 73 --~~g~tpLh~Aa~~g~~~~v~~Ll~---~~~~~~~~~d~~G~t~Lh~A~~~g~---------~~iv~~Ll~~~~~~~~~ 138 (382)
..|+||||+|+..|+.+++++|++ .+.+ ++.+|.+|+||||+|+..++ .+++++|++.| ++
T Consensus 136 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g----a~ 210 (260)
T 3jxi_A 136 YFYFGELPLSLAACTNQPHIVHYLTENGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKC----AK 210 (260)
T ss_dssp SCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHH----HH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHhccccCCC-CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhC----cc
Confidence 579999999999999999999999 6666 78899999999999999888 79999999998 67
Q ss_pred c-------ccccCCCCCHHHHHHhhCCCCccc
Q 037143 139 F-------WQVDNQGNSALHLAAKYGDHLPLL 163 (382)
Q Consensus 139 ~-------~~~D~~G~TpLH~A~~~g~~~~~~ 163 (382)
+ +.+|.+|+||||+|+..|+.++++
T Consensus 211 ~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~ 242 (260)
T 3jxi_A 211 LFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQ 242 (260)
T ss_dssp HCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred cccccchhhcccCCCCCHHHHHHHcCCHHHHH
Confidence 7 789999999999999999977653
No 79
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.87 E-value=1e-23 Score=170.92 Aligned_cols=114 Identities=16% Similarity=0.058 Sum_probs=102.9
Q ss_pred ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHH
Q 037143 34 VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNIL 113 (382)
Q Consensus 34 ~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~L 113 (382)
+..|.||||+|+ ..++.++++.|++.+.+. +..|..|+||||+||..|+.+++++|++.+++ ++.+|.+|+|||
T Consensus 4 ~~~~~~~l~~A~--~~~~~~~v~~ll~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~g~tpL 77 (123)
T 3aaa_C 4 GSMCDKEFMWAL--KNGDLDEVKDYVAKGEDV---NRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKHHITPL 77 (123)
T ss_dssp ---CHHHHHHHH--HTTCHHHHHHHHHTTCCT---TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTTSCCHH
T ss_pred ccccchHHHHHH--HcCCHHHHHHHHHcCCCc---CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHH
Confidence 345899999999 789999999999998776 77788999999999999999999999999887 778899999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhC
Q 037143 114 LLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYG 157 (382)
Q Consensus 114 h~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g 157 (382)
|+|+..|+.+++++|++.+ ++++.+|.+|+||||+|...+
T Consensus 78 ~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 78 LSAVYEGHVSCVKLLLSKG----ADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp HHHHHHTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHCCCHH
T ss_pred HHHHHcCCHHHHHHHHHcC----CCCCCcCCCCCCHHHHhCCHH
Confidence 9999999999999999998 789999999999999995443
No 80
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.86 E-value=4.2e-23 Score=198.25 Aligned_cols=157 Identities=12% Similarity=-0.016 Sum_probs=126.4
Q ss_pred cccCCCCCcccccccCCC--cccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCC----ccccC
Q 037143 33 YVYNGQDPRISTFGQDVN--AFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVA----MWDLD 106 (382)
Q Consensus 33 ~~~~G~TPLh~A~~~~~~--~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~----~~~~d 106 (382)
.|..|+||||+|+ ..+ +.+++++|++.+++. +..|..|+||||+|+..|+.+++++|++.+++. ++..|
T Consensus 134 ~~~~g~t~L~~A~--~~g~~~~~~v~~Ll~~ga~~---~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 208 (364)
T 3ljn_A 134 KHCKGQTALHWCV--GLGPEYLEMIKILVQLGASP---TAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYAN 208 (364)
T ss_dssp EEESCCCHHHHHH--HSCGGGHHHHHHHHHHTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCC
T ss_pred CCCCCCCHHHHHH--HcCCchHHHHHHHHHcCCCC---cccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccC
Confidence 4556999999999 667 999999999998876 778889999999999999999999999998763 67789
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcccc---CcchhhhHHHHHHHHHHHh
Q 037143 107 PAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLF---PGAALQVQWEIKWFQHVKK 183 (382)
Q Consensus 107 ~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~---~~~~l~~~~~~~~~~~v~~ 183 (382)
..|+||||+|+..|+.+++++|++.| +++|.+|.+|+||||+|+..|+.+++++ .|+.... ...
T Consensus 209 ~~g~t~L~~A~~~g~~~~v~~Ll~~g----ad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~---------~~~ 275 (364)
T 3ljn_A 209 KQGNSHLHWAILINWEDVAMRFVEMG----IDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLI---------QAC 275 (364)
T ss_dssp TTCCCTTHHHHTTTCHHHHHHHHTTT----CCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHH---------HTC
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcC----CCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhh---------hcC
Confidence 99999999999999999999999998 7999999999999999999999776542 0111100 000
Q ss_pred hccccccccccCCCCCccccchhh
Q 037143 184 LMPRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 184 ~~~~~~~~~~N~~G~Tpldla~~~ 207 (382)
..........+..|.||+..+...
T Consensus 276 ~~~~~~~~~~~~~~~~~l~~aa~~ 299 (364)
T 3ljn_A 276 PYHNGTTVLPDRVVWLDFVPAAAD 299 (364)
T ss_dssp TTBSSSSBCGGGCCCCTTSCSSCC
T ss_pred cccCcccccccccccccchhhhhc
Confidence 001111234677889999877654
No 81
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.86 E-value=5e-23 Score=198.96 Aligned_cols=161 Identities=15% Similarity=0.131 Sum_probs=133.0
Q ss_pred HHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhh
Q 037143 18 VLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILD 96 (382)
Q Consensus 18 iv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~ 96 (382)
.++.|+++ +.+.+. |..|+||||+|+ ..++.+++++|++.+++. +..|..|.||||+|+..|+.+++++|++
T Consensus 148 ~~~~ll~~--ga~vn~~d~~g~TpL~~A~--~~g~~~iv~~Ll~~ga~~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 220 (373)
T 2fo1_E 148 EAKECIAA--GADVNAMDCDENTPLMLAV--LARRRRLVAYLMKAGADP---TIYNKSERSALHQAAANRDFGMMVYMLN 220 (373)
T ss_dssp HHHHHHHT--CCCTTCCCTTSCCHHHHHH--HHTCHHHHHHHHHTTCCS---CCCCTTCCCHHHHHHHTTCHHHHHHHTT
T ss_pred HHHHHHhc--CCCCcCCCCCCCCHHHHHH--HcChHHHHHHHHHCCCCC---cccCCCCCCHHHHHHHCCCHHHHHHHHh
Confidence 34566677 666665 556999999999 779999999999999876 7778899999999999999999999998
Q ss_pred hC---CCCccccCCCCCcHHHHHHHcC---CHHHHHHHHhCCCcccccccc--------ccCCCCCHHHHHHhhCCCCcc
Q 037143 97 TF---PVAMWDLDPAEKNILLLAIENR---RTSVYNLLLSRKALGQTIFWQ--------VDNQGNSALHLAAKYGDHLPL 162 (382)
Q Consensus 97 ~~---~~~~~~~d~~G~t~Lh~A~~~g---~~~iv~~Ll~~~~~~~~~~~~--------~D~~G~TpLH~A~~~g~~~~~ 162 (382)
.+ .+ ++..|.+|+||||+|+..+ +.+++++|++.+ ++++. +|.+|+||||+|+..|+.+++
T Consensus 221 ~~~~~~~-~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g----~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v 295 (373)
T 2fo1_E 221 STKLKGD-IEELDRNGMTALMIVAHNEGRDQVASAKLLVEKG----AKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIV 295 (373)
T ss_dssp SHHHHHT-TSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHT----CCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHH
T ss_pred cCccccC-hhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCC----CCcccccccccCcccccCCCHHHHHHHhCCHHHH
Confidence 76 34 6778999999999999998 899999999998 45554 788999999999999986654
Q ss_pred ccCcchhhhHHHHHHHHHHHhhccccccccccCCCCCccccchhh
Q 037143 163 LFPGAALQVQWEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 163 ~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~ 207 (382)
+. .++. .+.+++.+|.+|.||+++|...
T Consensus 296 ~~---------------Ll~~--~~~~~n~~d~~g~TpL~~A~~~ 323 (373)
T 2fo1_E 296 KY---------------LVGE--KGSNKDKQDEDGKTPIMLAAQE 323 (373)
T ss_dssp HH---------------HHHH--SCCCTTCCCTTCCCHHHHHHHH
T ss_pred HH---------------HHHh--cCCCccCcCCCCCCHHHHHHHc
Confidence 21 1111 1245678999999999998765
No 82
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.86 E-value=7.2e-23 Score=165.39 Aligned_cols=117 Identities=26% Similarity=0.285 Sum_probs=107.8
Q ss_pred CCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHHH
Q 037143 36 NGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILLL 115 (382)
Q Consensus 36 ~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~ 115 (382)
+|+||||+|+ ..++.+++++|++.+.+. +..|..|.||||+|+..|+.+++++|++.+++ ++.+|..|+||||+
T Consensus 1 ~g~t~L~~A~--~~~~~~~v~~Ll~~~~~~---~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~ 74 (126)
T 1n0r_A 1 NGRTPLHLAA--RNGHLEVVKLLLEAGADV---NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHL 74 (126)
T ss_dssp CCCCHHHHHH--HHTCHHHHHHHHHHTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred CCccHHHHHH--HcCcHHHHHHHHHcCCCC---CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCcHHHH
Confidence 4899999999 779999999999988765 67788999999999999999999999999877 67789999999999
Q ss_pred HHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcc
Q 037143 116 AIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPL 162 (382)
Q Consensus 116 A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~ 162 (382)
|+..|+.+++++|++.+ .+++.+|.+|+||||+|+..|+.+++
T Consensus 75 A~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t~l~~A~~~~~~~~~ 117 (126)
T 1n0r_A 75 AARNGHLEVVKLLLEAG----ADVNAKDKNGRTPLHLAARNGHLEVV 117 (126)
T ss_dssp HHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHcChHHHHHHHHHcC----CCCcccCCCCCCHHHHHHHcCcHHHH
Confidence 99999999999999998 78999999999999999999986654
No 83
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.86 E-value=1.7e-22 Score=183.86 Aligned_cols=114 Identities=18% Similarity=0.111 Sum_probs=100.4
Q ss_pred ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccC-CCCCcH
Q 037143 34 VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLD-PAEKNI 112 (382)
Q Consensus 34 ~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~G~t~ 112 (382)
+.+|+||||+|+ ..++.++++.|++ +.+. +.+|..|+||||+||..|+.+++++|++.+++ ++.+| ..|+||
T Consensus 42 ~~~g~t~L~~A~--~~g~~~~v~~Ll~-~~~~---~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~t~ 114 (244)
T 3ui2_A 42 VSEYETPWWTAA--RKADEQALSQLLE-DRDV---DAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTA 114 (244)
T ss_dssp HHHHHHHHHHHH--TTTCHHHHHHTTT-TCCT---TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSCCCH
T ss_pred ccCCCCHHHHHH--HcCCHHHHHHHHc-CCCC---CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCCCCCCCH
Confidence 446999999999 7899999999999 6655 77888999999999999999999999999887 55566 789999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCC
Q 037143 113 LLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGD 158 (382)
Q Consensus 113 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~ 158 (382)
||+|+..|+.+++++|+++| ++++.+|.+|+||||+|+..++
T Consensus 115 L~~A~~~g~~~~v~~Ll~~g----a~~~~~d~~g~t~l~~A~~~~~ 156 (244)
T 3ui2_A 115 LHMAAGYVRPEVVEALVELG----ADIEVEDERGLTALELAREILK 156 (244)
T ss_dssp HHHHHHTTCHHHHHHHHHTT----CCTTCCCTTCCCHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHCC----CCCCCCCCCCCcHHHHHHHHHh
Confidence 99999999999999999998 7999999999999999987543
No 84
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.86 E-value=7e-23 Score=190.81 Aligned_cols=119 Identities=13% Similarity=0.042 Sum_probs=108.2
Q ss_pred ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHH
Q 037143 34 VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNIL 113 (382)
Q Consensus 34 ~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~L 113 (382)
+.+|.||||.|+ ..|+.++++.|++.+++. +..|..|.||||+||..|+.+++++|++.+++ ++..|..|+|||
T Consensus 37 ~~~~~t~l~~A~--~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~tpL 110 (299)
T 1s70_B 37 KFDDGAVFLAAC--SSGDTEEVLRLLERGADI---NYANVDGLTALHQACIDDNVDMVKFLVENGAN-INQPDNEGWIPL 110 (299)
T ss_dssp EECHHHHHHHHH--HHTCHHHHHHHHHHCCCT---TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred ccCCccHHHHHH--HcCCHHHHHHHHHcCCCC---cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHH
Confidence 445889999999 779999999999998776 77888999999999999999999999999877 678899999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcc
Q 037143 114 LLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPL 162 (382)
Q Consensus 114 h~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~ 162 (382)
|+|+..|+.+++++|++.| ++++.+|.+|.||||+|+..++.+++
T Consensus 111 ~~A~~~g~~~~v~~Ll~~g----~~~~~~~~~g~t~l~~A~~~~~~~~~ 155 (299)
T 1s70_B 111 HAAASCGYLDIAEYLISQG----AHVGAVNSEGDTPLDIAEEEAMEELL 155 (299)
T ss_dssp HHHHHHTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHCCSHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhCC----CCCCCcCCCCCCHHHHHHhcchHHHH
Confidence 9999999999999999998 78999999999999999888775554
No 85
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.85 E-value=2.2e-22 Score=174.72 Aligned_cols=114 Identities=18% Similarity=0.111 Sum_probs=104.2
Q ss_pred ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccC-CCCCcH
Q 037143 34 VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLD-PAEKNI 112 (382)
Q Consensus 34 ~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~G~t~ 112 (382)
+.+|+||||+|+ ..++.++++.|++ +.+. +..|..|+||||+|+..|+.+++++|++.+++ ++.+| .+|+||
T Consensus 41 ~~~g~t~L~~A~--~~g~~~~v~~Ll~-~~~~---~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~g~tp 113 (183)
T 3deo_A 41 VSEYETPWWTAA--RKADEQALSQLLE-DRDV---DAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTA 113 (183)
T ss_dssp HHHHHHHHHHHH--HTTCHHHHHHHTT-TSCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSSCCH
T ss_pred CCCCCCHHHHHH--HcCCHHHHHHHHh-cCCC---CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCCH
Confidence 556999999999 7899999999999 6655 77888999999999999999999999999888 55566 899999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCC
Q 037143 113 LLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGD 158 (382)
Q Consensus 113 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~ 158 (382)
||+|+..|+.+++++|++.| ++++.+|.+|+||||+|+..++
T Consensus 114 L~~A~~~~~~~~v~~Ll~~g----a~~~~~d~~g~tpl~~A~~~~~ 155 (183)
T 3deo_A 114 LHMAAGYVRPEVVEALVELG----ADIEVEDERGLTALELAREILK 155 (183)
T ss_dssp HHHHHHTTCHHHHHHHHHHT----CCTTCCCTTSCCHHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHHHcC----CCCcCCCCCCCCHHHHHHHhcc
Confidence 99999999999999999998 7999999999999999998765
No 86
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.85 E-value=8.8e-22 Score=166.30 Aligned_cols=127 Identities=13% Similarity=-0.014 Sum_probs=98.8
Q ss_pred HHHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCc-HHHHHHHcCcHHHH
Q 037143 14 WAIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKET-PILVAAKMGVTEMV 91 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t-pLh~Aa~~g~~~~v 91 (382)
...+++++|+++ +.+.+. +..|+||||+|+ .++.+++++|++.+++. +.+|..|+| |||+|+..|+.+++
T Consensus 23 g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~---~~~~~~v~~Ll~~g~~~---~~~d~~g~ttpL~~A~~~~~~~~v 94 (156)
T 1bi7_B 23 GRVEEVRALLEA--GANPNAPNSYGRRPIQVMM---MGSARVAELLLLHGAEP---NCADPATLTRPVHDAAREGFLDTL 94 (156)
T ss_dssp TCHHHHHHHHTT--TCCTTCCCSSSCCTTTSSC---TTCHHHHHHHHTTTCCC---CCCCTTTCCCHHHHHHHHTCHHHH
T ss_pred CCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHH---cCCHHHHHHHHHcCCCC---CCcCCCCCcHHHHHHHHCCCHHHH
Confidence 347899999998 666654 556999999984 58999999999998876 778889999 99999999999999
Q ss_pred HHHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHH
Q 037143 92 KKILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLA 153 (382)
Q Consensus 92 ~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A 153 (382)
++|++.+++ ++.+|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||.+-+
T Consensus 95 ~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 95 VVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRAAA----GGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------------
T ss_pred HHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHHcC----CCCCccCcCcCcccccC
Confidence 999999887 6788999999999999999999999999999 79999999999998844
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.85 E-value=1.1e-22 Score=177.76 Aligned_cols=158 Identities=6% Similarity=-0.013 Sum_probs=121.7
Q ss_pred CCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcH----HHHHHHhhhCCCCccccCCCCCcH
Q 037143 37 GQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVT----EMVKKILDTFPVAMWDLDPAEKNI 112 (382)
Q Consensus 37 G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~----~~v~~Ll~~~~~~~~~~d~~G~t~ 112 (382)
++++||.|+ ..|+.+.++.+++.+.+. ..+..|+||||+|+..|+. +++++|++.+++ ++.+|.+|+||
T Consensus 6 ~~~~l~~Aa--~~g~~~~~~~l~~~~~~~----~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad-vn~~d~~g~Tp 78 (186)
T 3t8k_A 6 EYRTVSAAA--MLGTYEDFLELFEKGYED----KESVLKSNILYDVLRNNNDEARYKISMFLINKGAD-IKSRTKEGTTL 78 (186)
T ss_dssp HCSSHHHHH--HHSCHHHHHHHHHHSSSC----HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC-SSCCCTTCCCT
T ss_pred cccHHHHHH--HcCCHHHHHHHHhcCccc----ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC-CCCCCCCCCcH
Confidence 689999999 779999888887765432 2225699999999999975 599999999888 78899999999
Q ss_pred HHHHHHcCC------HHHHHHHHhCCCccccccccccCCCC-CHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhc
Q 037143 113 LLLAIENRR------TSVYNLLLSRKALGQTIFWQVDNQGN-SALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLM 185 (382)
Q Consensus 113 Lh~A~~~g~------~~iv~~Ll~~~~~~~~~~~~~D~~G~-TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~ 185 (382)
||+|+..|+ .+++++|++.| +++|.+|.+|+ ||||+|+..+..+. ...+.++..+
T Consensus 79 Lh~a~~~~~~~~~~~~~iv~~Ll~~G----adin~~d~~g~ttpLh~A~~~~~~~~--------------~~~~iv~~Ll 140 (186)
T 3t8k_A 79 FFPLFQGGGNDITGTTELCKIFLEKG----ADITALYKPYKIVVFKNIFNYFVDEN--------------EMIPLYKLIF 140 (186)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTT----CCSSSCBGGGTBCTTGGGGGCCSCHH--------------HHHHHHHHHH
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHCC----CCCCccCCCcCchHHHHHHHcCCChh--------------hHHHHHHHHH
Confidence 999999987 57899999999 89999999999 99999998554210 0001112111
Q ss_pred --cccccccccCCCCCccccchhhh-HHHHHhhhhHh
Q 037143 186 --PRHFFTRYNDDGKTPDEVFTESH-RDLVKQGREWL 219 (382)
Q Consensus 186 --~~~~~~~~N~~G~Tpldla~~~~-~~l~~~~~~~~ 219 (382)
.+.+++.+|++|+||+|+|.+.. .+.++...++.
T Consensus 141 ~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 141 SQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp TSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred HhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 34567899999999999998753 44444443333
No 88
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.85 E-value=2e-22 Score=191.37 Aligned_cols=132 Identities=16% Similarity=0.118 Sum_probs=111.4
Q ss_pred HHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCc---ccccccCCCCC-chhhhhhhccCCCCcHHHHHHH----c
Q 037143 15 AIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNA---FTARETPLDPS-TYKKKNARRSRRKETPILVAAK----M 85 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~---~~~v~~Ll~~~-~~~~~~~~~~~~g~tpLh~Aa~----~ 85 (382)
..+++++||++ +++.+. |.+|+||||+|+ ..++ .++++.|++.+ ++. +.+|..|+||||+|+. .
T Consensus 143 ~~~~v~~Ll~~--Gad~n~~d~~g~TpLh~A~--~~g~~~~~~~~~~ll~~~~~~~---~~~d~~g~tpLh~A~~~~~~~ 215 (327)
T 1sw6_A 143 NLELVKHLVKH--GSNRLYGDNMGESCLVKAV--KSVNNYDSGTFEALLDYLYPCL---ILEDSMNRTILHHIIITSGMT 215 (327)
T ss_dssp CHHHHHHHHHT--TCCTTBCCTTCCCHHHHHH--HSSHHHHTTCHHHHHHHHGGGG---GEECTTCCCHHHHHHHHHTST
T ss_pred CHHHHHHHHHc--CCCCCCcCCCCCCHHHHHH--HhcccccHHHHHHHHHhhhccc---cCCCCCCCCHHHHHHHHcccc
Confidence 47899999999 677765 555999999999 5666 67777777765 333 7788999999999999 9
Q ss_pred CcHHHHHHHhhhCC--------------------C------------------------CccccCCCCCcHHHHHHHcCC
Q 037143 86 GVTEMVKKILDTFP--------------------V------------------------AMWDLDPAEKNILLLAIENRR 121 (382)
Q Consensus 86 g~~~~v~~Ll~~~~--------------------~------------------------~~~~~d~~G~t~Lh~A~~~g~ 121 (382)
|+.++++.|++.+. + .++.+|.+|+||||+|+..|+
T Consensus 216 g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~ 295 (327)
T 1sw6_A 216 GCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGN 295 (327)
T ss_dssp TCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCC
T ss_pred ccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCC
Confidence 99999999987631 0 167789999999999999999
Q ss_pred HHHHHHHHhCCCccccccccccCCCCCHHHHHHhhC
Q 037143 122 TSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYG 157 (382)
Q Consensus 122 ~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g 157 (382)
.+++++|++.| ++++.+|.+|+||||+|+..|
T Consensus 296 ~~~v~~Ll~~G----ad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 296 ISIVDALLDYG----ADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHHHHHHTT----CCTTCCCTTSCCGGGGTCC--
T ss_pred HHHHHHHHHcC----CCCcccCCCCCCHHHHHHhcC
Confidence 99999999999 899999999999999998764
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.84 E-value=5.1e-21 Score=157.78 Aligned_cols=116 Identities=23% Similarity=0.109 Sum_probs=100.3
Q ss_pred hccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCH
Q 037143 70 RRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSA 149 (382)
Q Consensus 70 ~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~Tp 149 (382)
.+|..|+||||+|+..|+.+++++|++.+.+ ++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQHK----ALVNTTGYQNDSP 79 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCGGGCCH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC----CcccCcCCCCCCH
Confidence 3577899999999999999999999999877 6788999999999999999999999999998 7999999999999
Q ss_pred HHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccccCCCCCccccchhhh
Q 037143 150 LHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTESH 208 (382)
Q Consensus 150 LH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~~ 208 (382)
||+|+..|+.++++. .++. +.+++.+|.+|.||+++|.+..
T Consensus 80 L~~A~~~~~~~~v~~---------------Ll~~---ga~~~~~~~~g~tpl~~A~~~~ 120 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKL---------------LLSY---GASRNAVNIFGLRPVDYTDDES 120 (137)
T ss_dssp HHHHHHTTCHHHHHH---------------HHHT---TCCTTCCCTTSCCGGGGCCCHH
T ss_pred HHHHHHcCCHHHHHH---------------HHHc---CCCCCCCCCCCCCHHHHHhhcc
Confidence 999999998665431 1222 2346789999999999998654
No 90
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.83 E-value=2.3e-22 Score=179.70 Aligned_cols=120 Identities=13% Similarity=0.024 Sum_probs=109.0
Q ss_pred ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhh-CCCCccccCCCCCcH
Q 037143 34 VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDT-FPVAMWDLDPAEKNI 112 (382)
Q Consensus 34 ~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~-~~~~~~~~d~~G~t~ 112 (382)
+.+|+||||+|+ ..|+.++++.|++.+++. +.+|..|+||||+||..|+.+++++|++. +.+ ++.+|..|+||
T Consensus 70 ~~~g~t~L~~A~--~~g~~~~v~~Ll~~g~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~~g~tp 143 (222)
T 3ehr_A 70 AESIDNPLHEAA--KRGNLSWLRECLDNRVGV---NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNKLGDTA 143 (222)
T ss_dssp EEEESCHHHHHH--HHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCTTSCCH
T ss_pred cccccccccccc--ccCcHHHHHHHHhCCCCc---cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCCCCCCH
Confidence 445899999999 789999999999988776 77788999999999999999999999998 555 78899999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccc
Q 037143 113 LLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLL 163 (382)
Q Consensus 113 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~ 163 (382)
||+|+..|+.+++++|++.| ++++.+|.+|+||||+|+..++.++++
T Consensus 144 L~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~g~t~l~~A~~~~~~~~l~ 190 (222)
T 3ehr_A 144 LHAAAWKGYADIVQLLLAKG----ARTDLRNIEKKLAFDMATNAACASLLK 190 (222)
T ss_dssp HHHHHHHTCHHHHHHHHHHT----CCSCCCCTTSCCHHHHCCSHHHHHHHC
T ss_pred HHHHHHcCCHHHHHHHHHcC----CCCccccCCCCCHHHHhcchhHHHHHH
Confidence 99999999999999999998 799999999999999999988766544
No 91
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=2.2e-20 Score=151.08 Aligned_cols=113 Identities=17% Similarity=0.036 Sum_probs=96.0
Q ss_pred cCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHH
Q 037143 72 SRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALH 151 (382)
Q Consensus 72 ~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH 151 (382)
+..|.||||+|+..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+||||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~d~~g~tpL~ 78 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKG----ADINAPDKHHITPLL 78 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTT----CCTTCCCTTSCCHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcC----CCCCcCCCCCCCHHH
Confidence 34589999999999999999999999887 6788999999999999999999999999998 799999999999999
Q ss_pred HHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccccCCCCCccccchhh
Q 037143 152 LAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 152 ~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~ 207 (382)
+|+..|+.++++. .++. ..+++.+|++|.||+++|...
T Consensus 79 ~A~~~~~~~~v~~---------------Ll~~---ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 79 SAVYEGHVSCVKL---------------LLSK---GADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp HHHHHTCHHHHHH---------------HHHT---TCCTTCCCTTSCCHHHHCCCH
T ss_pred HHHHcCCHHHHHH---------------HHHc---CCCCCCcCCCCCCHHHHhCCH
Confidence 9999998665431 1222 234678999999999999543
No 92
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.82 E-value=7.4e-21 Score=180.62 Aligned_cols=159 Identities=14% Similarity=0.082 Sum_probs=127.9
Q ss_pred HHHHHHHHHcCCCCCCcc-----------cccCCCCCcccccccCCCcccccccCCC-CCchhhhhhhccCCCCcHHHHH
Q 037143 15 AIQVLNELVDHRNPDQYK-----------YVYNGQDPRISTFGQDVNAFTARETPLD-PSTYKKKNARRSRRKETPILVA 82 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~-----------~~~~G~TPLh~A~~~~~~~~~~v~~Ll~-~~~~~~~~~~~~~~g~tpLh~A 82 (382)
..+++++|+++ +++.+ .+..|+||||+|+ ..|+.+++++|++ .+++. +..|..|+||+|.+
T Consensus 137 ~~~~~~~ll~~--ga~~~~~~~~~~~~~~~~~~g~T~L~~A~--~~g~~~~v~~LL~~~gad~---n~~d~~g~t~l~~~ 209 (337)
T 4g8k_A 137 KVKALKFLYKR--GANVNLRRKTKEDQERLRKGGATALMDAA--EKGHVEVLKILLDEMGADV---NACDNMGRNALIHA 209 (337)
T ss_dssp CHHHHHHHHHT--TCCTTCCCCCC-----CTTCSCCHHHHHH--HHTCHHHHHHHHHHSCCCT---TCCCTTSCCHHHHH
T ss_pred cHHHHHHHHHc--CCCcchhhccccccccccCCCCcHHHHHH--HCCCHHHHHHHHhccCCCc---CccCCCCCcHHHHH
Confidence 46889999998 44332 2345999999999 7899999999995 56665 77888999999998
Q ss_pred HHcCc----HHHHHHHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCC
Q 037143 83 AKMGV----TEMVKKILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGD 158 (382)
Q Consensus 83 a~~g~----~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~ 158 (382)
+..++ .+++++|++.+.+ ++.+|.+|+||||+|+..|+.++++.|++.. .+++|.+|.+|+||||+|+..|+
T Consensus 210 ~~~~~~~~~~~i~~lLl~~gad-~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~---~~~vn~~d~~G~TpL~~A~~~g~ 285 (337)
T 4g8k_A 210 LLSSDDSDVEAITHLLLDHGAD-VNVRGERGKTPLILAVEKKHLGLVQRLLEQE---HIEINDTDSDGKTALLLAVELKL 285 (337)
T ss_dssp HHHSCTTTHHHHHHHHHHTTCC-TTCCCGGGCCHHHHHHHTTCHHHHHHHHTST---TCCTTCBCTTSCBHHHHHHHTTC
T ss_pred HHHcCcccHHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhhhhHHHHHHHHhc---CCcccCcCCCCCCHHHHHHHcCC
Confidence 86554 4688999999887 7888999999999999999999999999875 27999999999999999999999
Q ss_pred CCccccCcchhhhHHHHHHHHHHHhhccccccccccCCCCCccccchhh
Q 037143 159 HLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 159 ~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~ 207 (382)
.+++++ .++.. -|.++.||++.|...
T Consensus 286 ~~iv~~---------------Ll~~G--------Ad~n~~~~L~~A~~~ 311 (337)
T 4g8k_A 286 KKIAEL---------------LCKRG--------ASTDCGDLVMTARRN 311 (337)
T ss_dssp HHHHHH---------------HHTTS--------CSSTTCCHHHHHHHT
T ss_pred HHHHHH---------------HHHCC--------CCCCCCCHHHHHHHc
Confidence 766432 12211 244567899988764
No 93
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.81 E-value=2.8e-21 Score=181.49 Aligned_cols=128 Identities=10% Similarity=0.022 Sum_probs=103.9
Q ss_pred HHHHHHHHHcCCCCCCccc-------ccCCCCCccccccc-CCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcC
Q 037143 15 AIQVLNELVDHRNPDQYKY-------VYNGQDPRISTFGQ-DVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMG 86 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~-------~~~G~TPLh~A~~~-~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g 86 (382)
.++.++.|+++ +.+.+. +..|+||||+|+.. ..++.+++++|++.+++. +.+|..|+||||+|+..|
T Consensus 163 ~~~~v~~ll~~--g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv---n~~d~~G~TpLh~A~~~g 237 (301)
T 2b0o_E 163 DLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL---DAKAADGNTALHYAALYN 237 (301)
T ss_dssp CHHHHHHHHHT--TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT---TCCCTTCCCHHHHHHHTT
T ss_pred CHHHHHHHHhc--CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC---CCCCCCCCCHHHHHHHcC
Confidence 35678889988 555543 56699999999931 127899999999998876 778889999999999999
Q ss_pred cHHHHHHHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCC
Q 037143 87 VTEMVKKILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGD 158 (382)
Q Consensus 87 ~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~ 158 (382)
+.+++++|++.+++ ++.+|.+|+||||+|+..|+.+++++|++.+ ++ .|+||||+|+..|+
T Consensus 238 ~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~g----a~------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 238 QPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQ----AG------TFAFPLHVDYSWVI 298 (301)
T ss_dssp CHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHH----HH------TTSSCCC-------
T ss_pred CHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhc----CC------CCCChhHHHHhcCC
Confidence 99999999999887 6789999999999999999999999999987 33 68999999999887
No 94
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.81 E-value=9.2e-21 Score=182.58 Aligned_cols=146 Identities=14% Similarity=0.054 Sum_probs=108.1
Q ss_pred CCCCcccccccCC-CcccccccCCCCCchhhhhhhcc--CCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHH
Q 037143 37 GQDPRISTFGQDV-NAFTARETPLDPSTYKKKNARRS--RRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNIL 113 (382)
Q Consensus 37 G~TPLh~A~~~~~-~~~~~v~~Ll~~~~~~~~~~~~~--~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~L 113 (382)
+.||||.|+ .. ++.++++.|++.+++. +..+ ..|.||||+|+..|+.+++++|++.+.+ ++.+|..|+|||
T Consensus 199 ~~t~L~~Aa--~~~g~~~~v~~LL~~Gadv---n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~~G~TpL 272 (368)
T 3jue_A 199 PGALLFRAS--GHPPSLPTMADALAHGADV---NWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VNQADSAGRGPL 272 (368)
T ss_dssp HHHHHHHHT--SSSCCHHHHHHHHHTTCCT---TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred CCcHHHHHH--HccCCHHHHHHHHHcCCCC---CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCCCCCCHH
Confidence 567999999 67 9999999999998876 5555 7899999999999999999999999887 778999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccc
Q 037143 114 LLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRY 193 (382)
Q Consensus 114 h~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~ 193 (382)
|+|+..|+.+++++|++.| ++++.+|.+|+||||+|+..|+.+++++ ..+...........
T Consensus 273 h~A~~~g~~~~v~~LL~~G----ad~~~~d~~G~TpL~~A~~~g~~~iv~l---------------Ll~~~~~~~~~~~~ 333 (368)
T 3jue_A 273 HHATILGHTGLACLFLKRG----ADLGARDSEGRDPLTIAMETANADIVTL---------------LRLAKMREAEAAQG 333 (368)
T ss_dssp HHHHHHTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHTTCHHHHHH---------------HHHHHC--------
T ss_pred HHHHHcCcHHHHHHHHHCc----CCCCCcCCCCCCHHHHHHHCCCHHHHHH---------------HHHcCCCccccccc
Confidence 9999999999999999998 7999999999999999999999766432 11111122223456
Q ss_pred cCCCCCccccchhh
Q 037143 194 NDDGKTPDEVFTES 207 (382)
Q Consensus 194 N~~G~Tpldla~~~ 207 (382)
+..+.|+++++...
T Consensus 334 ~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 334 QAGDETYLDIFRDF 347 (368)
T ss_dssp --------------
T ss_pred CCCCCCHHHHHHHH
Confidence 77899999998764
No 95
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.80 E-value=2.6e-20 Score=153.56 Aligned_cols=109 Identities=13% Similarity=0.041 Sum_probs=98.9
Q ss_pred HHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCC-CCcHHHHHHHcCcHHHHH
Q 037143 15 AIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRR-KETPILVAAKMGVTEMVK 92 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~-g~tpLh~Aa~~g~~~~v~ 92 (382)
..+++++|+++ +.+.+. |..|+||||+|+ . ++.+++++|++.+++. +.+|.. |+||||+|+..|+.++++
T Consensus 24 ~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~--~-~~~~~v~~Ll~~g~~~---~~~~~~~g~t~L~~A~~~~~~~~v~ 95 (136)
T 1d9s_A 24 QVETVRQLLEA--GADPNALNRFGRRPIQVMM--M-GSAQVAELLLLHGAEP---NCADPATLTRPVHDAAREGFLDTLV 95 (136)
T ss_dssp CHHHHHHHHHT--TCCTTCCCTTCCTTTTTST--T-SCHHHHHHHHHHTCCS---SCCBTTTTBCHHHHHHHHTCHHHHH
T ss_pred CHHHHHHHHHc--CCCcCCcCCCCCCHHHHHH--c-CCHHHHHHHHHCCCCC---CCcCCCCCCCHHHHHHHcCCHHHHH
Confidence 47899999999 666654 556999999999 7 9999999999998876 777888 999999999999999999
Q ss_pred HHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 037143 93 KILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRK 132 (382)
Q Consensus 93 ~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~ 132 (382)
+|++.+++ ++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 96 ~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 96 VLHRAGAR-LDVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp HHHHTCCC-CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 99999887 6788999999999999999999999999987
No 96
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.80 E-value=6.9e-20 Score=163.58 Aligned_cols=150 Identities=19% Similarity=0.181 Sum_probs=118.3
Q ss_pred cccCCCCCcccccccCCCcccccccCCCCCch------------hhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCC
Q 037143 33 YVYNGQDPRISTFGQDVNAFTARETPLDPSTY------------KKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPV 100 (382)
Q Consensus 33 ~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~------------~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~ 100 (382)
.+.++++|.+++. ..|+...+.-+.+.+-- ....+..+..|.||||+||..|+.++++.|++.+.+
T Consensus 21 ~d~~~~~~~el~~--~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 98 (222)
T 3ehr_A 21 YTFEPRTPDELYI--EEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVG 98 (222)
T ss_dssp SCCCCSSTTBCCC--CTTCEEEEEECCSSSEEEEEETTEEEEEEHHHHHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CCcCCCCCCcccc--cCCCEEEEeccccchhHhcccCCcceeechhhccccccccccccccccccCcHHHHHHHHhCCCC
Confidence 3556889999988 56666555444332210 011244566789999999999999999999998877
Q ss_pred CccccCCCCCcHHHHHHHcCCHHHHHHHHhC-CCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHH
Q 037143 101 AMWDLDPAEKNILLLAIENRRTSVYNLLLSR-KALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQ 179 (382)
Q Consensus 101 ~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~-~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~ 179 (382)
++.+|..|+||||+|+..|+.+++++|++. + +++|.+|.+|+||||+|+..|+.+++++
T Consensus 99 -~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g----~~~~~~d~~g~tpL~~A~~~~~~~~v~~--------------- 158 (222)
T 3ehr_A 99 -VNGLDKAGSTALYWACHGGHKDIVEMLFTQPN----IELNQQNKLGDTALHAAAWKGYADIVQL--------------- 158 (222)
T ss_dssp -TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTT----CCCCCCCTTSCCHHHHHHHHTCHHHHHH---------------
T ss_pred -ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCC----CCccccCCCCCCHHHHHHHcCCHHHHHH---------------
Confidence 678899999999999999999999999998 6 7999999999999999999999665432
Q ss_pred HHHhhccccccccccCCCCCccccchhh
Q 037143 180 HVKKLMPRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 180 ~v~~~~~~~~~~~~N~~G~Tpldla~~~ 207 (382)
.++. +..++.+|.+|.||+++|...
T Consensus 159 Ll~~---ga~~~~~~~~g~t~l~~A~~~ 183 (222)
T 3ehr_A 159 LLAK---GARTDLRNIEKKLAFDMATNA 183 (222)
T ss_dssp HHHH---TCCSCCCCTTSCCHHHHCCSH
T ss_pred HHHc---CCCCccccCCCCCHHHHhcch
Confidence 2222 234678999999999999765
No 97
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=1e-20 Score=151.15 Aligned_cols=108 Identities=19% Similarity=0.098 Sum_probs=97.0
Q ss_pred cccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcH
Q 037143 33 YVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNI 112 (382)
Q Consensus 33 ~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~ 112 (382)
.|.+|+||||+|+ ..++.+++++|++.+++. +..|..|.||||+|+..|+.+++++|++.+++ ++.+|..|+||
T Consensus 5 ~d~~g~t~L~~A~--~~~~~~~~~~Ll~~g~~~---~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~tp 78 (115)
T 2l6b_A 5 GSKDGNTPLHNAA--KNGHAEEVKKLLSKGADV---NARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKDGNTP 78 (115)
T ss_dssp CSCSSCCHHHHHH--HHTCHHHHHHHTTTTCCS---SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTTCCCT
T ss_pred cCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCC---CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCCH
Confidence 4667999999999 779999999999998776 77788999999999999999999999999887 67789999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHH
Q 037143 113 LLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSAL 150 (382)
Q Consensus 113 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpL 150 (382)
||+|+..|+.+++++|++.| +++|.+|..|.||-
T Consensus 79 l~~A~~~~~~~~~~~Ll~~g----a~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 79 EHLAKKNGHHEIVKLLDAKG----ADVNARSWGSSHHH 112 (115)
T ss_dssp THHHHTTTCHHHHHHHHTTS----SSHHHHSCCCC---
T ss_pred HHHHHHCCCHHHHHHHHHcC----CCCCcCCccccccc
Confidence 99999999999999999998 79999999999884
No 98
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.80 E-value=3e-20 Score=174.44 Aligned_cols=137 Identities=13% Similarity=0.029 Sum_probs=112.4
Q ss_pred CCCCcccccccCCCcccccccCCCCCchhhhhhh------ccCCCCcHHHHHHHc---CcHHHHHHHhhhCCCCccccCC
Q 037143 37 GQDPRISTFGQDVNAFTARETPLDPSTYKKKNAR------RSRRKETPILVAAKM---GVTEMVKKILDTFPVAMWDLDP 107 (382)
Q Consensus 37 G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~------~~~~g~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~ 107 (382)
+.+|||.|+ ..++.+.++.|++.+++. +. .+..|+||||+|+.. |+.+++++|++.+++ ++.+|.
T Consensus 151 ~~~~L~~A~--~~g~~~~v~~ll~~g~d~---~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn~~d~ 224 (301)
T 2b0o_E 151 EPQRLWTAI--CNRDLLSVLEAFANGQDF---GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAA 224 (301)
T ss_dssp CHHHHHHHH--HTTCHHHHHHHHHTTCCT---TSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TTCCCT
T ss_pred hHHHHhhhh--hccCHHHHHHHHhcCCcc---cccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CCCCCC
Confidence 446699999 789999999998888765 43 577899999999997 899999999999887 788899
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccc
Q 037143 108 AEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPR 187 (382)
Q Consensus 108 ~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~ 187 (382)
+|+||||+|+..|+.+++++|++.| ++++.+|.+|+||||+|+..|+.+++++ .++
T Consensus 225 ~G~TpLh~A~~~g~~~~v~~Ll~~g----ad~~~~d~~G~TpL~~A~~~~~~~iv~~---------------Ll~----- 280 (301)
T 2b0o_E 225 DGNTALHYAALYNQPDCLKLLLKGR----ALVGTVNEAGETALDIARKKHHKECEEL---------------LEQ----- 280 (301)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTT----CCCSCCCTTSCCHHHHHHHHTCHHHHHH---------------HHH-----
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC----CCCCCcCCCCCCHHHHHHHcCCHHHHHH---------------HHH-----
Confidence 9999999999999999999999998 7999999999999999999999665431 111
Q ss_pred cccccccCCCCCccccchhh
Q 037143 188 HFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 188 ~~~~~~N~~G~Tpldla~~~ 207 (382)
...+.|.||+++|.+.
T Consensus 281 ----~ga~~g~tpLh~A~~~ 296 (301)
T 2b0o_E 281 ----AQAGTFAFPLHVDYSW 296 (301)
T ss_dssp ----HHHHTTSSCCC-----
T ss_pred ----hcCCCCCChhHHHHhc
Confidence 1122689999999764
No 99
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.80 E-value=1.9e-20 Score=162.48 Aligned_cols=113 Identities=21% Similarity=0.141 Sum_probs=96.8
Q ss_pred cCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCcccccccccc-CCCCCHH
Q 037143 72 SRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVD-NQGNSAL 150 (382)
Q Consensus 72 ~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D-~~G~TpL 150 (382)
+.+|+||||+|+..|+.++++.|++ +.+ ++.+|.+|+||||+|+..|+.+++++|++.+ +++|.+| .+|+|||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~~~~~g~tpL 114 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAG----ADLDHRDMRGGLTAL 114 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT----CCTTCCCSSSSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCcCCCCCCCCHH
Confidence 4569999999999999999999999 555 7889999999999999999999999999998 7999998 8999999
Q ss_pred HHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccccCCCCCccccchhhh
Q 037143 151 HLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTESH 208 (382)
Q Consensus 151 H~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~~ 208 (382)
|+|+..|+.++++. .++. +.+++.+|.+|.||+++|.+..
T Consensus 115 ~~A~~~~~~~~v~~---------------Ll~~---ga~~~~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 115 HMAAGYVRPEVVEA---------------LVEL---GADIEVEDERGLTALELAREIL 154 (183)
T ss_dssp HHHHHTTCHHHHHH---------------HHHH---TCCTTCCCTTSCCHHHHHHHHH
T ss_pred HHHHhcCcHHHHHH---------------HHHc---CCCCcCCCCCCCCHHHHHHHhc
Confidence 99999999665431 1222 2345689999999999998753
No 100
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.80 E-value=2.1e-20 Score=170.03 Aligned_cols=141 Identities=18% Similarity=0.082 Sum_probs=116.9
Q ss_pred cCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHH
Q 037143 35 YNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILL 114 (382)
Q Consensus 35 ~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh 114 (382)
..|.+|+..++ ..++.+.++.+...+.+. +.+|.||||+||+.|+.++++.|++ +.+ ++.+|..|+||||
T Consensus 13 ~~~~~~~l~~~--~~g~~~~~~~~~~~~~~~------~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~ 82 (244)
T 3ui2_A 13 GEGAMEYLIEW--KDGHSPSWVPSSYIAADV------VSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALL 82 (244)
T ss_dssp TTTEEEEEEEE--SSCCCCEEEEGGGSCHHH------HHHHHHHHHHHHTTTCHHHHHHTTT-TCC-TTCBCTTSCBHHH
T ss_pred CCCccHHHHHH--HcCCCccccccccccccc------ccCCCCHHHHHHHcCCHHHHHHHHc-CCC-CCCcCCCCCCHHH
Confidence 34788888888 678888877776665432 3469999999999999999999999 655 7889999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCcccccccccc-CCCCCHHHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccc
Q 037143 115 LAIENRRTSVYNLLLSRKALGQTIFWQVD-NQGNSALHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRY 193 (382)
Q Consensus 115 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D-~~G~TpLH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~ 193 (382)
+|+..|+.+++++|++.| +++|.+| .+|+||||+|+..|+.+++++ .++. ..+++.+
T Consensus 83 ~A~~~g~~~~v~~Ll~~g----a~~~~~~~~~g~t~L~~A~~~g~~~~v~~---------------Ll~~---ga~~~~~ 140 (244)
T 3ui2_A 83 FVAGLGSDKCVRLLAEAG----ADLDHRDMRGGLTALHMAAGYVRPEVVEA---------------LVEL---GADIEVE 140 (244)
T ss_dssp HHHHHTCHHHHHHHHHTT----CCTTCCCSSSCCCHHHHHHHTTCHHHHHH---------------HHHT---TCCTTCC
T ss_pred HHHHCCCHHHHHHHHHcC----CCCCcCCCCCCCCHHHHHHHcCCHHHHHH---------------HHHC---CCCCCCC
Confidence 999999999999999998 7999998 889999999999999665432 1222 3346789
Q ss_pred cCCCCCccccchhh
Q 037143 194 NDDGKTPDEVFTES 207 (382)
Q Consensus 194 N~~G~Tpldla~~~ 207 (382)
|++|.||+++|.+.
T Consensus 141 d~~g~t~l~~A~~~ 154 (244)
T 3ui2_A 141 DERGLTALELAREI 154 (244)
T ss_dssp CTTCCCHHHHHHHH
T ss_pred CCCCCcHHHHHHHH
Confidence 99999999999753
No 101
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.79 E-value=4.6e-20 Score=152.02 Aligned_cols=111 Identities=15% Similarity=0.056 Sum_probs=98.7
Q ss_pred HHHHHHHHHHcCCCCCCccc-ccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHH
Q 037143 14 WAIQVLNELVDHRNPDQYKY-VYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVK 92 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~~-~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~ 92 (382)
...+++++|+++ +.+.+. |..|+||||+|+ ..++.+++++|++.+++. +..|..|.||||+|+..|+.++++
T Consensus 25 g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~---~~~d~~g~t~L~~A~~~~~~~~v~ 97 (136)
T 2jab_A 25 GQDDEVRILMAN--GADVNAKDEYGLTPLYLAT--AHGHLEIVEVLLKNGADV---NAVDAIGFTPLHLAAFIGHLEIAE 97 (136)
T ss_dssp TCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHH--HHTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred CCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHH--HcCCHHHHHHHHHcCCCC---CcCCCCCCCHHHHHHHcCCHHHHH
Confidence 346899999999 666554 556999999999 779999999999998876 778889999999999999999999
Q ss_pred HHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 037143 93 KILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRK 132 (382)
Q Consensus 93 ~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~ 132 (382)
+|++.+++ ++.+|.+|+||||+|+..|+.+++++|++.|
T Consensus 98 ~Ll~~g~~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 98 VLLKHGAD-VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHcCCC-CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999887 6778999999999999999999999999875
No 102
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.79 E-value=2.8e-20 Score=142.99 Aligned_cols=84 Identities=31% Similarity=0.329 Sum_probs=54.8
Q ss_pred CCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHH
Q 037143 75 KETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAA 154 (382)
Q Consensus 75 g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~ 154 (382)
|+||||+|+..|+.+++++|++.+++ ++.+|.+|+||||+|+..|+.+++++|++.| ++++.+|.+|+||||+|+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g----a~~~~~d~~g~t~l~~A~ 76 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAG----ADVNAKDKNGRTPLHLAA 76 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCCCccCCCCCCHHHHHH
Confidence 56666666666666666666666555 4556666666666666666666666666666 566666666666666666
Q ss_pred hhCCCCccc
Q 037143 155 KYGDHLPLL 163 (382)
Q Consensus 155 ~~g~~~~~~ 163 (382)
..|+.++++
T Consensus 77 ~~~~~~~~~ 85 (93)
T 1n0q_A 77 RNGHLEVVK 85 (93)
T ss_dssp HTTCHHHHH
T ss_pred HcCCHHHHH
Confidence 666655543
No 103
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.79 E-value=1.8e-19 Score=138.37 Aligned_cols=91 Identities=24% Similarity=0.261 Sum_probs=84.3
Q ss_pred CCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHHH
Q 037143 36 NGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILLL 115 (382)
Q Consensus 36 ~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~ 115 (382)
+|+||||+|+ ..++.+++++|++.+++. +.+|..|+||||+|+..|+.+++++|++.+++ ++.+|.+|+||||+
T Consensus 1 ~g~t~L~~A~--~~~~~~~v~~Ll~~g~~~---n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~l~~ 74 (93)
T 1n0q_A 1 NGRTPLHLAA--RNGHLEVVKLLLEAGADV---NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHL 74 (93)
T ss_dssp --CCHHHHHH--HHTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHH
T ss_pred CCCcHHHHHH--HcCCHHHHHHHHHcCCCC---cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHH
Confidence 4899999999 779999999999998876 78889999999999999999999999999887 67889999999999
Q ss_pred HHHcCCHHHHHHHHhCC
Q 037143 116 AIENRRTSVYNLLLSRK 132 (382)
Q Consensus 116 A~~~g~~~iv~~Ll~~~ 132 (382)
|+..|+.+++++|++.|
T Consensus 75 A~~~~~~~~~~~Ll~~g 91 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAG 91 (93)
T ss_dssp HHHTTCHHHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHHcC
Confidence 99999999999999988
No 104
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.78 E-value=4.6e-19 Score=142.81 Aligned_cols=111 Identities=26% Similarity=0.299 Sum_probs=96.0
Q ss_pred CCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHH
Q 037143 74 RKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLA 153 (382)
Q Consensus 74 ~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A 153 (382)
+|+||||+|+..|+.+++++|++.+++ ++..|..|+||||+|+..|+.+++++|++.+ .+++.+|.+|+||||+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~~~~g~t~l~~A 75 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAG----ADVNAKDKNGRTPLHLA 75 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcC----CCCcccCCCCCcHHHHH
Confidence 489999999999999999999999877 6778999999999999999999999999998 78999999999999999
Q ss_pred HhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccccCCCCCccccchhh
Q 037143 154 AKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYNDDGKTPDEVFTES 207 (382)
Q Consensus 154 ~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~~G~Tpldla~~~ 207 (382)
+..|+.++++. .++. +..++.+|.+|.||+++|...
T Consensus 76 ~~~~~~~~~~~---------------Ll~~---g~~~~~~~~~g~t~l~~A~~~ 111 (126)
T 1n0r_A 76 ARNGHLEVVKL---------------LLEA---GADVNAKDKNGRTPLHLAARN 111 (126)
T ss_dssp HHTTCHHHHHH---------------HHHT---TCCTTCCCTTSCCHHHHHHHT
T ss_pred HHcChHHHHHH---------------HHHc---CCCCcccCCCCCCHHHHHHHc
Confidence 99998655321 1222 233568899999999999765
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.76 E-value=2.4e-19 Score=166.30 Aligned_cols=119 Identities=11% Similarity=0.047 Sum_probs=104.4
Q ss_pred CCCCcccccccCCCcccccccCCCCCchhhh---hhhccCCCCcHHHHHHHc---CcHHHHHHHhhhCCCCccccCCCCC
Q 037143 37 GQDPRISTFGQDVNAFTARETPLDPSTYKKK---NARRSRRKETPILVAAKM---GVTEMVKKILDTFPVAMWDLDPAEK 110 (382)
Q Consensus 37 G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~---~~~~~~~g~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~G~ 110 (382)
..++||.|+ ..++.+.++.+++.+.+... .+..|..|+||||+|+.. |+.+++++|++.+++ ++.+|.+|+
T Consensus 130 ~l~~l~~a~--~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~~d~~g~ 206 (278)
T 1dcq_A 130 KLHSLCEAV--KTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDKQTGKGS 206 (278)
T ss_dssp HHHHHHHHH--HTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTCCCTTCC
T ss_pred hhhhhhhHh--hhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccccCCCCC
Confidence 456899999 77888888888887766321 234477899999999999 899999999999888 788999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCcc
Q 037143 111 NILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPL 162 (382)
Q Consensus 111 t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~ 162 (382)
||||+|+..|+.+++++|++.| ++++.+|.+|+||||+|+..|+.+++
T Consensus 207 TpLh~A~~~g~~~~v~~Ll~~g----ad~~~~d~~g~tpL~~A~~~~~~~~v 254 (278)
T 1dcq_A 207 TALHYCCLTDNAECLKLLLRGK----ASIEIANESGETPLDIAKRLKHEHCE 254 (278)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcC----CCCCCccCCCCCHHHHHHHcCCHHHH
Confidence 9999999999999999999998 79999999999999999999996654
No 106
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.75 E-value=7.8e-19 Score=140.08 Aligned_cols=109 Identities=25% Similarity=0.196 Sum_probs=91.3
Q ss_pred hccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCH
Q 037143 70 RRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSA 149 (382)
Q Consensus 70 ~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~Tp 149 (382)
.+|.+|+||||+||..|+.++++.|++.+++ ++.+|..|+||||+|+..|+.+++++|++.+ ++++.+|.+|+||
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~d~~g~tp 78 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKG----ADVNARSKDGNTP 78 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT----CCTTCCCTTCCCT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC----CCCcccCCCCCCH
Confidence 3577899999999999999999999999887 6778999999999999999999999999998 7999999999999
Q ss_pred HHHHHhhCCCCccccCcchhhhHHHHHHHHHHHhhccccccccccCCCCCcc
Q 037143 150 LHLAAKYGDHLPLLFPGAALQVQWEIKWFQHVKKLMPRHFFTRYNDDGKTPD 201 (382)
Q Consensus 150 LH~A~~~g~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~N~~G~Tpl 201 (382)
||+|+..|+.++++. .++ ...+++.+|..|.||.
T Consensus 79 l~~A~~~~~~~~~~~---------------Ll~---~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 79 EHLAKKNGHHEIVKL---------------LDA---KGADVNARSWGSSHHH 112 (115)
T ss_dssp THHHHTTTCHHHHHH---------------HHT---TSSSHHHHSCCCC---
T ss_pred HHHHHHCCCHHHHHH---------------HHH---cCCCCCcCCccccccc
Confidence 999999998655421 111 2334668889999885
No 107
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.75 E-value=2e-19 Score=166.95 Aligned_cols=111 Identities=10% Similarity=-0.038 Sum_probs=96.9
Q ss_pred HHHHHHHHcCCCCCC----cc-cccCCCCCcccccccCC---CcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCc
Q 037143 16 IQVLNELVDHRNPDQ----YK-YVYNGQDPRISTFGQDV---NAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGV 87 (382)
Q Consensus 16 ~eiv~~Ll~~~~~~~----~~-~~~~G~TPLh~A~~~~~---~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~ 87 (382)
.+.++.+++.+.... .+ .|..|+||||+|+ .. ++.+++++|++.|++. +.+|..|+||||+|+..|+
T Consensus 143 ~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~--~~~~~~~~~~v~~Ll~~ga~i---n~~d~~g~TpLh~A~~~g~ 217 (278)
T 1dcq_A 143 IFGLLQAYADGVDLTEKIPLANGHEPDETALHLAV--RSVDRTSLHIVDFLVQNSGNL---DKQTGKGSTALHYCCLTDN 217 (278)
T ss_dssp HHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHH--HHCCTTTHHHHHHHHHHCSCT---TCCCTTCCCHHHHHHHTTC
T ss_pred cHHHHHHHHhhcchhhhccccccccCCCCcchHHH--HhcccchHHHHHHHHHCCCCc---cccCCCCCCHHHHHHHcCC
Confidence 567788888844332 11 2556999999999 55 8899999999999876 7889999999999999999
Q ss_pred HHHHHHHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 037143 88 TEMVKKILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRK 132 (382)
Q Consensus 88 ~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~ 132 (382)
.+++++|++.+++ ++.+|.+|+||||+|+..|+.+++++|++.+
T Consensus 218 ~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 261 (278)
T 1dcq_A 218 AECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQAL 261 (278)
T ss_dssp HHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 9999999999887 7889999999999999999999999999988
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.74 E-value=5.9e-19 Score=176.92 Aligned_cols=116 Identities=14% Similarity=0.065 Sum_probs=97.6
Q ss_pred CCCcccccccCCCcccccccCCCCCchhhhhhhc------cCCCCcHHHHHHH---cCcHHHHHHHhhhCCCCccccCCC
Q 037143 38 QDPRISTFGQDVNAFTARETPLDPSTYKKKNARR------SRRKETPILVAAK---MGVTEMVKKILDTFPVAMWDLDPA 108 (382)
Q Consensus 38 ~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~------~~~g~tpLh~Aa~---~g~~~~v~~Ll~~~~~~~~~~d~~ 108 (382)
.+.||.|+ ..|+.+.++.|++.|++. +.. |..|+||||+||. .|+.+++++|++.+++ ++.+|.+
T Consensus 133 ~~~L~~A~--~~g~~~~v~~ll~~g~~~---n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-vn~~d~~ 206 (497)
T 3lvq_E 133 PQRLWTAI--CNRDLLSVLEAFANGQDF---GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDAKAAD 206 (497)
T ss_dssp HHHHHHHH--HHTCHHHHHHHHHTTCCS---SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-TTCCCSS
T ss_pred HHHHHHHH--hccCHHHHHHHHhhcccc---cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-CCccCCC
Confidence 35689998 778889998888888765 433 6778999999966 8889999999998877 6778889
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccc
Q 037143 109 EKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLL 163 (382)
Q Consensus 109 G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~ 163 (382)
|+||||+|+..|+.+++++|+++| +++|.+|.+|+||||+|+..|+.++++
T Consensus 207 g~TpLh~A~~~g~~~~v~~Ll~~g----a~~~~~d~~g~tpl~~A~~~~~~~~~~ 257 (497)
T 3lvq_E 207 GNTALHYAALYNQPDCLKLLLKGR----ALVGTVNEAGETALDIARKKHHKECEE 257 (497)
T ss_dssp SCCHHHHHTTTTCHHHHHHHHHTC----CCCSCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcC----CCCCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 999999999999999999999988 789999999999999999888866653
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.73 E-value=1.3e-18 Score=174.30 Aligned_cols=126 Identities=10% Similarity=0.047 Sum_probs=101.0
Q ss_pred HHHHHHHHHHcCCCCCCccc-------ccCCCCCcccccc-cCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHc
Q 037143 14 WAIQVLNELVDHRNPDQYKY-------VYNGQDPRISTFG-QDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKM 85 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~~-------~~~G~TPLh~A~~-~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~ 85 (382)
...++++.||++ +.+.+. |..|+||||+|+. ...++.+++++|++.|++. +.+|..|+||||+||..
T Consensus 143 g~~~~v~~ll~~--g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v---n~~d~~g~TpLh~A~~~ 217 (497)
T 3lvq_E 143 RDLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL---DAKAADGNTALHYAALY 217 (497)
T ss_dssp TCHHHHHHHHHT--TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT---TCCCSSSCCHHHHHTTT
T ss_pred cCHHHHHHHHhh--cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC---CccCCCCCcHHHHHHHc
Confidence 446889999999 555442 4559999999952 2579999999999999887 88899999999999999
Q ss_pred CcHHHHHHHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHh
Q 037143 86 GVTEMVKKILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAK 155 (382)
Q Consensus 86 g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~ 155 (382)
|+.+++++|++.+++ ++.+|.+|+||||+|+..|+.+++++|++.| ++++. ||+|.+..
T Consensus 218 g~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~g----a~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 218 NQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQ----AGTFA------FPLHVDYS 276 (497)
T ss_dssp TCHHHHHHHHHTCCC-CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTC----C------------------
T ss_pred CCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhC----CCCCC------Ccceeecc
Confidence 999999999999988 7889999999999999999999999999999 66665 57776654
No 110
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.71 E-value=3.5e-18 Score=164.52 Aligned_cols=136 Identities=16% Similarity=0.166 Sum_probs=100.3
Q ss_pred HHHHHHHHHHcCCCCCCcccc---cCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHH
Q 037143 14 WAIQVLNELVDHRNPDQYKYV---YNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEM 90 (382)
Q Consensus 14 ~~~eiv~~Ll~~~~~~~~~~~---~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~ 90 (382)
..+++++.|+++ +.+.+.. ..|+||||+|+ ..++.+++++|++.+++. +..|..|+||||+|+..|+.++
T Consensus 211 g~~~~v~~LL~~--Gadvn~~~~~~~g~TpLh~Aa--~~g~~~iv~~LL~~Gadv---n~~d~~G~TpLh~A~~~g~~~~ 283 (368)
T 3jue_A 211 PSLPTMADALAH--GADVNWVNGGQDNATPLIQAT--AANSLLACEFLLQNGANV---NQADSAGRGPLHHATILGHTGL 283 (368)
T ss_dssp CCHHHHHHHHHT--TCCTTCCCTTTTCCCHHHHHH--HTTCHHHHHHHHHTTCCT---TCCCTTSCCHHHHHHHHTCHHH
T ss_pred CCHHHHHHHHHc--CCCCCccccccCCCCHHHHHH--HCCCHHHHHHHHHcCCCC---CCCCCCCCCHHHHHHHcCcHHH
Confidence 457899999999 6666543 45999999999 779999999999999877 7888999999999999999999
Q ss_pred HHHHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCC
Q 037143 91 VKKILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGD 158 (382)
Q Consensus 91 v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~ 158 (382)
+++|++.+++ ++.+|.+|+||||+|+..|+.+++++|++.+. .+......+..+.|+++++.....
T Consensus 284 v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~-~~~~~~~~~~~~~t~l~i~~~~~~ 349 (368)
T 3jue_A 284 ACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKM-REAEAAQGQAGDETYLDIFRDFSL 349 (368)
T ss_dssp HHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-------------------------
T ss_pred HHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC-CcccccccCCCCCCHHHHHHHHHh
Confidence 9999999887 68899999999999999999999999998763 234555667788999998776543
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.71 E-value=9.3e-18 Score=133.15 Aligned_cols=89 Identities=20% Similarity=0.190 Sum_probs=79.5
Q ss_pred hhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccCCCCCcHHHHHHHcCCHHHHHHHHhCCCccccccccccCCCCC
Q 037143 69 ARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLDPAEKNILLLAIENRRTSVYNLLLSRKALGQTIFWQVDNQGNS 148 (382)
Q Consensus 69 ~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~T 148 (382)
...|.+|.||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|++.| ++++.+|.+|+|
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g----a~~~~~d~~g~t 92 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAG----ADVXAQDKFGKT 92 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCTTSCC
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcC----CCccccccCCCc
Confidence 45577899999999999999999999999877 6778999999999999999999999999998 799999999999
Q ss_pred HHHHHHhhCCCCcc
Q 037143 149 ALHLAAKYGDHLPL 162 (382)
Q Consensus 149 pLH~A~~~g~~~~~ 162 (382)
|||+|+..|+.+++
T Consensus 93 pl~~A~~~~~~~~~ 106 (110)
T 2zgd_A 93 AFDISIDNGNEDLA 106 (110)
T ss_dssp HHHHHHHHTCHHHH
T ss_pred HHHHHHHcCCHHHH
Confidence 99999999986553
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.71 E-value=9.4e-20 Score=176.08 Aligned_cols=121 Identities=16% Similarity=0.035 Sum_probs=95.9
Q ss_pred CCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCC--ccccCCCCCcHH
Q 037143 36 NGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVA--MWDLDPAEKNIL 113 (382)
Q Consensus 36 ~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~--~~~~d~~G~t~L 113 (382)
+++||||+|+ ..|+.+++++|++.+++....+..+..|.||||+||+.|+.++|++|++.+++. .+..+.+ +|||
T Consensus 91 ~~~T~Lh~Aa--~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpL 167 (376)
T 2aja_A 91 KSEVICFVAA--ITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAF 167 (376)
T ss_dssp CHHHHHHHHH--HHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred CcCCHHHHHH--HcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHH
Confidence 4679999999 789999999999987632111223445789999999999999999999998652 1222223 8999
Q ss_pred HHHHHcCCHHHHHHHHhCCCcccccccc--ccCCCCCHHHHHH-hhCCCCccc
Q 037143 114 LLAIENRRTSVYNLLLSRKALGQTIFWQ--VDNQGNSALHLAA-KYGDHLPLL 163 (382)
Q Consensus 114 h~A~~~g~~~iv~~Ll~~~~~~~~~~~~--~D~~G~TpLH~A~-~~g~~~~~~ 163 (382)
|+|+..|+.+++++|+++| ++++. +|.+|+||||+|+ ..|+.++++
T Consensus 168 h~Aa~~G~~eiv~~Ll~~g----a~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~ 216 (376)
T 2aja_A 168 RLAAENGHLHVLNRLCELA----PTEATAMIQAENYYAFRWAAVGRGHHNVIN 216 (376)
T ss_dssp HHHHHTTCHHHHHHHHHSC----GGGHHHHHHHHHHHHHHHHHSTTCCHHHHH
T ss_pred HHHHHCCCHHHHHHHHHcC----CccchhccCCCCCCHHHHHHHHCCCHHHHH
Confidence 9999999999999999998 67777 8999999999999 999977653
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.71 E-value=5.5e-20 Score=177.72 Aligned_cols=134 Identities=11% Similarity=0.037 Sum_probs=107.0
Q ss_pred HHHHHHHHHcCCCCCCc--ccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHH
Q 037143 15 AIQVLNELVDHRNPDQY--KYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVK 92 (382)
Q Consensus 15 ~~eiv~~Ll~~~~~~~~--~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~ 92 (382)
..+++++|++++..... ..+..|+||||+|+ ..|+.+++++|++.+++....+..+.+ .||||+||..|+.++++
T Consensus 104 ~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa--~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~ 180 (376)
T 2aja_A 104 CSSALDTLCLLLTSDEIVKVIQAENYQAFRLAA--ENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLN 180 (376)
T ss_dssp CHHHHHHHTTC--CCSSCC--CHHHHHHHHHHH--HTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHH
T ss_pred CHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHH--HcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHH
Confidence 47899999998431111 33445899999999 789999999999998642111222223 99999999999999999
Q ss_pred HHhhhCCCCccc--cCCCCCcHHHHHH-HcCCHHHHHHHHhCCCccccccccccCCCCCHHHHHHhhCCCCccc
Q 037143 93 KILDTFPVAMWD--LDPAEKNILLLAI-ENRRTSVYNLLLSRKALGQTIFWQVDNQGNSALHLAAKYGDHLPLL 163 (382)
Q Consensus 93 ~Ll~~~~~~~~~--~d~~G~t~Lh~A~-~~g~~~iv~~Ll~~~~~~~~~~~~~D~~G~TpLH~A~~~g~~~~~~ 163 (382)
+|++.+++ ++. .|.+|+||||+|+ .+|+.+++++|++.| + .|+||||.|+..|+.++++
T Consensus 181 ~Ll~~ga~-~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g----a-------~~~taL~~Aa~~g~~evv~ 242 (376)
T 2aja_A 181 RLCELAPT-EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP----V-------MLAYAEIHEFEYGEKYVNP 242 (376)
T ss_dssp HHHHSCGG-GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH----H-------HHHHHHHCTTTTTTTTHHH
T ss_pred HHHHcCCc-cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC----C-------ccchHHHHHHHCCCHHHHH
Confidence 99999887 444 7888999999999 999999999999976 2 2899999999999988754
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.68 E-value=5.5e-18 Score=134.49 Aligned_cols=96 Identities=17% Similarity=0.153 Sum_probs=82.2
Q ss_pred CCCCcccccCCCCCcccccccCCCcccccccCCCCCchhhhhhhccCCCCcHHHHHHHcCcHHHHHHHhhhCCCCccccC
Q 037143 27 NPDQYKYVYNGQDPRISTFGQDVNAFTARETPLDPSTYKKKNARRSRRKETPILVAAKMGVTEMVKKILDTFPVAMWDLD 106 (382)
Q Consensus 27 ~~~~~~~~~~G~TPLh~A~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d 106 (382)
|....+.|.+|+||||+|+ ..++.+++++|++.+++. +.+|..|+||||+||..|+.+++++|++.+++ ++.+|
T Consensus 14 ~~~~~~~~~~g~t~L~~A~--~~g~~~~v~~Ll~~g~~i---~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d 87 (110)
T 2zgd_A 14 VPRGSHMGSDLGKKLLEAA--RAGQDDEVRILMANGADV---AAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQD 87 (110)
T ss_dssp --------CCHHHHHHHHH--HHTCHHHHHHHHHTTCCT---TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCC
T ss_pred CCcccccCCccchHHHHHH--HcCCHHHHHHHHHcCCCC---CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccc
Confidence 4455667888999999999 779999999999998776 77788999999999999999999999999877 77889
Q ss_pred CCCCcHHHHHHHcCCHHHHHHH
Q 037143 107 PAEKNILLLAIENRRTSVYNLL 128 (382)
Q Consensus 107 ~~G~t~Lh~A~~~g~~~iv~~L 128 (382)
..|+||||+|+..|+.+++++|
T Consensus 88 ~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 88 KFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHH
T ss_pred cCCCcHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999987
No 115
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=40.04 E-value=32 Score=31.59 Aligned_cols=21 Identities=5% Similarity=0.029 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHhchhh
Q 037143 310 TTLFTSIVAILVSFCSGHSFI 330 (382)
Q Consensus 310 ~~l~~s~~~m~~af~~~~~~v 330 (382)
.++.+|+.++..+|++|+|=+
T Consensus 281 ~LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 281 ILTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 467788888999999999954
No 116
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=39.54 E-value=24 Score=32.73 Aligned_cols=21 Identities=10% Similarity=0.151 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHhchhh
Q 037143 310 TTLFTSIVAILVSFCSGHSFI 330 (382)
Q Consensus 310 ~~l~~s~~~m~~af~~~~~~v 330 (382)
.++.+|+.++..+|++|+|=+
T Consensus 305 ~LTiit~IflP~T~IaGiyGM 325 (363)
T 2iub_A 305 VLTIIATIFMPLTFIAGIYGM 325 (363)
T ss_dssp HHHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHHhhhcc
Confidence 467788899999999999854
No 117
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=27.25 E-value=39 Score=20.28 Aligned_cols=19 Identities=26% Similarity=0.244 Sum_probs=15.2
Q ss_pred HHHHHHHcCcHHHHHHHhh
Q 037143 78 PILVAAKMGVTEMVKKILD 96 (382)
Q Consensus 78 pLh~Aa~~g~~~~v~~Ll~ 96 (382)
-+..||..|+.+.++.|-.
T Consensus 16 qiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHH
Confidence 3678999999999988753
No 118
>1vry_A Glycine receptor alpha-1 chain; second transmembrane domain, third transmembrane domain, membrane protein; NMR {Homo sapiens} SCOP: j.35.1.1
Probab=27.11 E-value=1.4e+02 Score=20.82 Aligned_cols=36 Identities=31% Similarity=0.318 Sum_probs=23.8
Q ss_pred HHHhchhhccCCccchhhHHHHHHHHHHHHHHHhhH
Q 037143 323 FCSGHSFILTNELRSAAYPIYAATCLPVTFFALAQL 358 (382)
Q Consensus 323 f~~~~~~v~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 358 (382)
..++.-.-+|..++..++=++.++|+..+|..++.+
T Consensus 18 ~~~~~~~~lPkVSYikAiDvw~~~C~~FVF~aLlEy 53 (76)
T 1vry_A 18 QSSGSRASLPKVSYVKAIDIWLAVCLLFVFSALLEY 53 (76)
T ss_dssp HHHCTTTCCCSHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HhcCcccCCCCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 344555557777777777777888877766666443
No 119
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=20.49 E-value=1.4e+02 Score=17.66 Aligned_cols=11 Identities=36% Similarity=0.431 Sum_probs=6.6
Q ss_pred HHhcCCCCccc
Q 037143 368 ILKTVPQRSYK 378 (382)
Q Consensus 368 ~~~~~~~~~~~ 378 (382)
.+...|+|.++
T Consensus 23 fLsnDP~RNP~ 33 (38)
T 3arc_I 23 FLSGDPARNPK 33 (38)
T ss_dssp HHTTGGGCSSS
T ss_pred ccCCCCCCCCC
Confidence 45566666654
Done!