Query 037144
Match_columns 502
No_of_seqs 285 out of 2767
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 09:05:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037144.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037144hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02590 probable tyrosine dec 100.0 4.5E-95 1E-99 751.1 54.9 478 1-501 51-532 (539)
2 PLN02880 tyrosine decarboxylas 100.0 1.1E-89 2.3E-94 712.4 53.4 478 1-501 7-484 (490)
3 KOG0628 Aromatic-L-amino-acid/ 100.0 1.7E-88 3.6E-93 652.7 40.3 461 4-501 1-471 (511)
4 TIGR03799 NOD_PanD_pyr putativ 100.0 4.3E-73 9.3E-78 588.7 49.0 465 8-494 23-518 (522)
5 PF00282 Pyridoxal_deC: Pyrido 100.0 1.2E-73 2.7E-78 573.9 30.7 370 38-415 1-373 (373)
6 KOG0629 Glutamate decarboxylas 100.0 3.9E-72 8.4E-77 533.5 31.5 472 7-502 31-510 (510)
7 TIGR03811 tyr_de_CO2_Ent tyros 100.0 3.7E-67 8.1E-72 547.5 49.9 457 5-500 15-601 (608)
8 COG0076 GadB Glutamate decarbo 100.0 8.6E-59 1.9E-63 473.5 38.6 437 19-497 3-445 (460)
9 PLN02263 serine decarboxylase 100.0 8.1E-57 1.8E-61 454.2 37.4 358 56-500 75-442 (470)
10 TIGR01788 Glu-decarb-GAD gluta 100.0 5.9E-56 1.3E-60 452.1 40.1 398 47-501 15-429 (431)
11 PLN03032 serine decarboxylase; 100.0 2E-49 4.3E-54 396.0 35.5 357 56-498 8-373 (374)
12 PRK02769 histidine decarboxyla 100.0 5.4E-48 1.2E-52 388.7 37.1 356 56-500 7-371 (380)
13 cd06450 DOPA_deC_like DOPA dec 100.0 6.6E-44 1.4E-48 359.3 36.1 340 79-497 1-344 (345)
14 PRK13520 L-tyrosine decarboxyl 100.0 4.7E-35 1E-39 297.9 36.3 367 54-500 2-370 (371)
15 TIGR03812 tyr_de_CO2_Arch tyro 100.0 2.2E-34 4.8E-39 293.1 36.7 368 55-498 1-373 (373)
16 COG0520 csdA Selenocysteine ly 100.0 1.4E-34 3.1E-39 292.5 33.6 355 78-500 24-404 (405)
17 KOG1383 Glutamate decarboxylas 100.0 3.7E-34 8E-39 277.9 29.4 387 47-501 54-446 (491)
18 COG1104 NifS Cysteine sulfinat 100.0 3.9E-33 8.4E-38 271.6 32.0 340 77-501 2-377 (386)
19 PRK04366 glycine dehydrogenase 100.0 4.6E-30 1E-34 267.8 35.2 396 38-501 35-448 (481)
20 TIGR00461 gcvP glycine dehydro 100.0 4.1E-30 9E-35 277.4 35.7 381 55-501 467-867 (939)
21 PRK05367 glycine dehydrogenase 100.0 2.3E-29 5.1E-34 276.5 36.2 380 54-501 478-875 (954)
22 TIGR01977 am_tr_V_EF2568 cyste 100.0 3.8E-29 8.3E-34 254.9 31.1 312 114-497 42-375 (376)
23 PRK09295 bifunctional cysteine 100.0 8.9E-29 1.9E-33 254.6 32.2 356 78-500 25-403 (406)
24 TIGR03402 FeS_nifS cysteine de 100.0 1.3E-28 2.7E-33 251.3 32.8 339 79-501 2-372 (379)
25 PRK00451 glycine dehydrogenase 100.0 7.5E-29 1.6E-33 258.2 31.4 385 37-499 31-446 (447)
26 PRK10874 cysteine sulfinate de 100.0 2.2E-28 4.8E-33 251.3 34.0 358 77-501 20-398 (401)
27 TIGR01979 sufS cysteine desulf 100.0 2.5E-28 5.3E-33 251.3 33.4 358 78-502 20-402 (403)
28 TIGR03392 FeS_syn_CsdA cystein 100.0 2.2E-28 4.7E-33 251.1 32.8 357 78-501 18-395 (398)
29 cd06453 SufS_like Cysteine des 100.0 1.9E-28 4E-33 249.6 31.9 349 79-495 2-373 (373)
30 PLN02651 cysteine desulfurase 100.0 1.7E-28 3.7E-33 248.8 30.5 287 79-416 2-304 (364)
31 TIGR03531 selenium_SpcS O-phos 100.0 7.2E-28 1.6E-32 244.6 33.9 308 47-405 28-356 (444)
32 TIGR02006 IscS cysteine desulf 100.0 2.4E-28 5.2E-33 250.9 27.9 345 77-501 4-377 (402)
33 cd06451 AGAT_like Alanine-glyo 100.0 9.1E-28 2E-32 242.9 28.7 342 81-499 2-355 (356)
34 PLN02855 Bifunctional selenocy 100.0 8.8E-27 1.9E-31 241.1 34.3 357 77-501 33-418 (424)
35 PF00266 Aminotran_5: Aminotra 100.0 3.4E-27 7.5E-32 240.0 27.8 344 79-491 2-371 (371)
36 TIGR03403 nifS_epsilon cystein 100.0 2.1E-26 4.6E-31 235.1 33.4 342 79-501 2-375 (382)
37 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 1.4E-25 2.9E-30 229.2 36.6 314 117-501 64-381 (387)
38 PLN02409 serine--glyoxylate am 100.0 1.2E-26 2.5E-31 237.9 28.5 348 82-501 13-372 (401)
39 cd00613 GDC-P Glycine cleavage 100.0 2.1E-26 4.6E-31 236.5 30.3 370 58-495 3-398 (398)
40 TIGR01814 kynureninase kynuren 100.0 3.4E-26 7.3E-31 235.3 31.4 356 76-499 27-405 (406)
41 PRK02948 cysteine desulfurase; 100.0 2.4E-26 5.1E-31 234.7 29.6 341 79-501 3-374 (381)
42 TIGR01976 am_tr_V_VC1184 cyste 100.0 7E-26 1.5E-30 232.6 31.0 340 78-495 19-397 (397)
43 PRK14012 cysteine desulfurase; 100.0 3.8E-26 8.3E-31 234.8 27.7 341 77-501 4-379 (404)
44 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 2.5E-24 5.5E-29 218.1 35.7 310 118-499 46-360 (361)
45 KOG1549 Cysteine desulfurase N 99.9 1.5E-25 3.3E-30 219.2 25.0 222 75-333 42-271 (428)
46 TIGR02326 transamin_PhnW 2-ami 99.9 8E-25 1.7E-29 222.0 30.6 342 82-499 7-360 (363)
47 COG0075 Serine-pyruvate aminot 99.9 1E-24 2.2E-29 214.5 28.9 324 109-501 31-363 (383)
48 PLN02414 glycine dehydrogenase 99.9 5.5E-24 1.2E-28 233.1 35.9 328 110-501 562-907 (993)
49 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 9.3E-24 2E-28 214.4 34.7 311 120-502 55-369 (370)
50 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1E-23 2.2E-28 213.1 30.4 341 83-498 4-354 (355)
51 TIGR03235 DNA_S_dndA cysteine 99.9 6.9E-24 1.5E-28 214.3 28.5 288 79-415 1-301 (353)
52 PRK12566 glycine dehydrogenase 99.9 2.5E-23 5.5E-28 223.6 33.5 388 52-501 477-876 (954)
53 COG0436 Aspartate/tyrosine/aro 99.9 5.2E-23 1.1E-27 208.7 32.1 344 79-501 32-391 (393)
54 PRK13479 2-aminoethylphosphona 99.9 2.5E-23 5.4E-28 211.5 29.0 348 82-501 9-363 (368)
55 PLN02724 Molybdenum cofactor s 99.9 6.2E-23 1.3E-27 226.4 30.6 326 60-417 21-394 (805)
56 PTZ00094 serine hydroxymethylt 99.9 4.3E-23 9.4E-28 214.4 27.2 310 110-500 74-407 (452)
57 COG0156 BioF 7-keto-8-aminopel 99.9 9E-23 1.9E-27 202.8 27.7 339 69-498 39-387 (388)
58 PRK03080 phosphoserine aminotr 99.9 7.8E-23 1.7E-27 207.9 25.4 340 81-501 15-373 (378)
59 PLN02721 threonine aldolase 99.9 2.1E-22 4.5E-27 203.5 28.2 306 110-501 38-352 (353)
60 TIGR01822 2am3keto_CoA 2-amino 99.9 9.1E-22 2E-26 201.8 31.7 300 115-501 82-389 (393)
61 cd00609 AAT_like Aspartate ami 99.9 5.7E-22 1.2E-26 199.5 28.9 318 99-496 23-349 (350)
62 COG2008 GLY1 Threonine aldolas 99.9 1.1E-22 2.4E-27 194.5 22.1 305 105-499 28-341 (342)
63 cd06502 TA_like Low-specificit 99.9 1.3E-22 2.8E-27 203.7 24.0 296 117-497 33-337 (338)
64 PRK07179 hypothetical protein; 99.9 5.9E-22 1.3E-26 203.9 29.3 291 113-501 100-398 (407)
65 PRK06108 aspartate aminotransf 99.9 1.5E-21 3.4E-26 199.3 29.9 327 90-500 39-381 (382)
66 cd06454 KBL_like KBL_like; thi 99.9 3E-21 6.5E-26 194.7 31.6 299 114-498 44-348 (349)
67 PRK08361 aspartate aminotransf 99.9 1.3E-21 2.8E-26 200.4 28.6 331 90-501 48-390 (391)
68 PRK05764 aspartate aminotransf 99.9 3.4E-21 7.4E-26 197.6 30.9 334 91-501 47-391 (393)
69 cd00611 PSAT_like Phosphoserin 99.9 2.6E-22 5.7E-27 202.4 19.2 339 81-499 2-354 (355)
70 PLN02483 serine palmitoyltrans 99.9 2.5E-20 5.5E-25 194.8 32.7 345 72-501 103-466 (489)
71 TIGR01437 selA_rel uncharacter 99.9 1.1E-20 2.3E-25 190.9 28.0 324 87-498 23-362 (363)
72 PRK07324 transaminase; Validat 99.9 1.2E-20 2.6E-25 191.8 28.1 318 96-501 46-370 (373)
73 PRK13580 serine hydroxymethylt 99.9 6.6E-21 1.4E-25 193.9 25.6 325 108-500 87-444 (493)
74 PLN00145 tyrosine/nicotianamin 99.9 3.9E-20 8.5E-25 191.1 31.9 340 90-501 71-424 (430)
75 PRK06207 aspartate aminotransf 99.9 6.4E-20 1.4E-24 188.5 32.8 329 92-501 57-402 (405)
76 PLN02656 tyrosine transaminase 99.9 4.9E-20 1.1E-24 189.6 31.8 339 88-501 48-403 (409)
77 PRK07682 hypothetical protein; 99.9 1.6E-20 3.5E-25 191.5 27.7 328 93-502 38-377 (378)
78 PLN00175 aminotransferase fami 99.9 4E-20 8.6E-25 190.3 30.6 329 90-500 69-412 (413)
79 PLN02822 serine palmitoyltrans 99.9 1.5E-19 3.3E-24 188.5 35.1 334 90-501 125-477 (481)
80 PLN02187 rooty/superroot1 99.9 1.2E-19 2.5E-24 188.9 34.1 340 89-501 84-438 (462)
81 PTZ00433 tyrosine aminotransfe 99.9 8E-20 1.7E-24 188.3 32.4 341 89-501 51-408 (412)
82 COG1168 MalY Bifunctional PLP- 99.9 6.2E-20 1.3E-24 175.9 28.9 335 88-501 38-386 (388)
83 cd00378 SHMT Serine-glycine hy 99.9 1.1E-20 2.3E-25 194.5 25.7 342 78-500 20-384 (402)
84 PTZ00377 alanine aminotransfer 99.9 1.6E-19 3.5E-24 189.5 34.9 333 105-501 108-475 (481)
85 PRK05355 3-phosphoserine/phosp 99.9 2.6E-21 5.5E-26 194.9 20.2 337 82-501 7-358 (360)
86 PRK05937 8-amino-7-oxononanoat 99.9 7.2E-20 1.6E-24 185.9 30.3 336 72-501 7-350 (370)
87 PRK06939 2-amino-3-ketobutyrat 99.9 7.1E-20 1.5E-24 188.0 30.5 302 113-501 84-393 (397)
88 cd00616 AHBA_syn 3-amino-5-hyd 99.9 5.9E-20 1.3E-24 185.5 28.2 306 109-496 15-352 (352)
89 TIGR01265 tyr_nico_aTase tyros 99.9 5.2E-19 1.1E-23 181.8 34.7 342 90-501 50-401 (403)
90 COG1103 Archaea-specific pyrid 99.9 1.5E-19 3.2E-24 164.3 26.6 312 121-502 66-381 (382)
91 PRK13355 bifunctional HTH-doma 99.9 1.1E-19 2.4E-24 192.2 30.3 335 90-501 164-514 (517)
92 KOG2862 Alanine-glyoxylate ami 99.9 1.5E-19 3.3E-24 167.4 26.6 343 82-500 21-381 (385)
93 PRK00011 glyA serine hydroxyme 99.9 5.5E-20 1.2E-24 190.0 26.4 306 112-500 67-388 (416)
94 PRK05958 8-amino-7-oxononanoat 99.9 1.7E-19 3.8E-24 184.3 29.8 295 115-498 83-384 (385)
95 PRK13034 serine hydroxymethylt 99.9 8E-20 1.7E-24 187.7 27.2 309 111-500 69-391 (416)
96 TIGR01821 5aminolev_synth 5-am 99.9 2.1E-19 4.7E-24 184.7 30.2 296 117-501 91-396 (402)
97 PLN02231 alanine transaminase 99.9 8E-19 1.7E-23 184.7 34.9 331 105-501 161-527 (534)
98 PLN03226 serine hydroxymethylt 99.9 1E-19 2.2E-24 188.6 27.5 320 110-500 74-418 (475)
99 PRK05957 aspartate aminotransf 99.9 3.4E-19 7.4E-24 182.3 30.8 333 89-501 41-385 (389)
100 PLN00143 tyrosine/nicotianamin 99.9 1.4E-18 3E-23 178.8 35.2 344 88-501 49-404 (409)
101 PRK08363 alanine aminotransfer 99.9 3.1E-19 6.8E-24 183.2 30.4 333 90-501 48-394 (398)
102 PRK06290 aspartate aminotransf 99.9 4.6E-19 9.9E-24 182.0 31.4 337 91-501 60-405 (410)
103 TIGR01364 serC_1 phosphoserine 99.9 4.5E-20 9.8E-25 184.9 22.9 309 110-501 31-348 (349)
104 PRK08960 hypothetical protein; 99.9 1.8E-19 3.8E-24 184.4 27.8 328 89-500 46-386 (387)
105 KOG1368 Threonine aldolase [Am 99.9 2.8E-20 6.1E-25 171.2 19.3 302 106-497 50-364 (384)
106 PLN02414 glycine dehydrogenase 99.9 6.3E-19 1.4E-23 193.5 33.4 367 38-497 68-465 (993)
107 TIGR01366 serC_3 phosphoserine 99.9 4.4E-20 9.6E-25 186.2 22.5 309 110-502 35-361 (361)
108 TIGR03537 DapC succinyldiamino 99.9 4.5E-19 9.8E-24 178.9 29.8 325 91-497 16-349 (350)
109 PRK13392 5-aminolevulinate syn 99.9 4.9E-19 1.1E-23 182.5 30.5 296 119-501 94-397 (410)
110 PRK07681 aspartate aminotransf 99.9 5.3E-19 1.1E-23 181.6 30.6 327 90-498 47-385 (399)
111 PRK07777 aminotransferase; Val 99.9 3E-19 6.4E-24 182.8 28.5 330 93-500 42-385 (387)
112 PRK05367 glycine dehydrogenase 99.9 6.3E-19 1.4E-23 194.5 32.7 365 38-496 43-437 (954)
113 PRK08912 hypothetical protein; 99.9 7.8E-19 1.7E-23 179.7 31.3 315 106-500 57-385 (387)
114 cd00615 Orn_deC_like Ornithine 99.9 1.4E-20 3E-25 185.0 17.7 171 119-317 62-236 (294)
115 PRK09082 methionine aminotrans 99.9 2.7E-19 5.9E-24 182.9 27.6 325 91-497 46-385 (386)
116 PRK07309 aromatic amino acid a 99.9 1.1E-18 2.4E-23 178.6 32.0 334 90-501 45-388 (391)
117 PRK12414 putative aminotransfe 99.9 3.5E-19 7.6E-24 181.9 28.1 327 90-497 44-383 (384)
118 TIGR01264 tyr_amTase_E tyrosin 99.9 2.2E-18 4.7E-23 177.2 33.8 340 89-501 49-399 (401)
119 PRK06225 aspartate aminotransf 99.9 4.1E-19 8.9E-24 181.2 28.2 324 90-501 43-376 (380)
120 PRK07337 aminotransferase; Val 99.8 1.2E-18 2.5E-23 178.5 30.9 330 90-499 45-387 (388)
121 TIGR01141 hisC histidinol-phos 99.8 4.7E-19 1E-23 178.6 27.5 284 120-496 58-346 (346)
122 PLN02955 8-amino-7-oxononanoat 99.8 6.3E-19 1.4E-23 179.4 28.4 305 114-500 145-460 (476)
123 PRK09064 5-aminolevulinate syn 99.8 8E-19 1.7E-23 180.8 29.4 298 116-501 91-397 (407)
124 PLN02376 1-aminocyclopropane-1 99.8 5.7E-19 1.2E-23 184.8 28.6 322 108-500 90-437 (496)
125 PRK06348 aspartate aminotransf 99.8 1E-18 2.3E-23 178.4 29.9 326 90-498 45-382 (384)
126 PRK05942 aspartate aminotransf 99.8 2.4E-18 5.3E-23 176.4 32.2 313 106-498 67-389 (394)
127 TIGR03540 DapC_direct LL-diami 99.8 1.7E-18 3.6E-23 177.0 30.6 326 90-497 44-382 (383)
128 PF00155 Aminotran_1_2: Aminot 99.8 2.9E-19 6.3E-24 181.2 24.7 317 105-495 37-363 (363)
129 PRK07568 aspartate aminotransf 99.8 3E-18 6.5E-23 176.0 32.4 330 90-501 45-392 (397)
130 PRK06107 aspartate aminotransf 99.8 1.2E-18 2.7E-23 178.9 29.6 342 90-501 48-400 (402)
131 TIGR01825 gly_Cac_T_rel pyrido 99.8 2E-18 4.2E-23 176.6 30.9 305 107-501 69-381 (385)
132 PRK07550 hypothetical protein; 99.8 1.9E-18 4.2E-23 176.7 30.6 329 90-498 44-384 (386)
133 PRK08068 transaminase; Reviewe 99.8 2E-18 4.4E-23 176.7 30.0 323 92-497 49-385 (389)
134 PRK13393 5-aminolevulinate syn 99.8 2.1E-18 4.5E-23 177.5 30.2 298 116-501 90-396 (406)
135 PRK13238 tnaA tryptophanase/L- 99.8 3.8E-18 8.3E-23 176.6 32.0 332 93-500 59-432 (460)
136 PLN03227 serine palmitoyltrans 99.8 8.2E-18 1.8E-22 171.6 33.0 306 118-501 45-382 (392)
137 TIGR00858 bioF 8-amino-7-oxono 99.8 2.1E-18 4.6E-23 174.6 28.6 292 116-496 61-360 (360)
138 PRK09265 aminotransferase AlaT 99.8 2.9E-18 6.3E-23 176.4 29.7 321 106-501 66-401 (404)
139 PRK14807 histidinol-phosphate 99.8 8.1E-18 1.8E-22 169.8 32.3 285 121-499 64-350 (351)
140 PRK08056 threonine-phosphate d 99.8 4E-18 8.6E-23 172.4 29.8 290 119-500 58-354 (356)
141 PRK05387 histidinol-phosphate 99.8 6.1E-18 1.3E-22 170.9 30.3 310 91-500 40-352 (353)
142 PRK09276 LL-diaminopimelate am 99.8 4.3E-18 9.2E-23 174.1 29.1 326 90-497 46-384 (385)
143 PRK06836 aspartate aminotransf 99.8 1.4E-17 3E-22 170.8 32.9 333 89-502 47-392 (394)
144 KOG0259 Tyrosine aminotransfer 99.8 1.2E-17 2.6E-22 159.0 29.5 375 54-501 42-433 (447)
145 PLN02450 1-aminocyclopropane-1 99.8 7.3E-18 1.6E-22 175.8 30.8 325 108-500 82-429 (468)
146 PRK06855 aminotransferase; Val 99.8 6.8E-18 1.5E-22 174.8 30.4 359 88-501 48-429 (433)
147 PRK07366 succinyldiaminopimela 99.8 5E-18 1.1E-22 173.8 28.4 329 90-498 45-387 (388)
148 PRK09147 succinyldiaminopimela 99.8 9.6E-18 2.1E-22 172.1 30.6 326 90-500 44-395 (396)
149 PRK08636 aspartate aminotransf 99.8 1.9E-17 4.1E-22 170.3 32.5 339 90-501 49-400 (403)
150 PRK07683 aminotransferase A; V 99.8 1.5E-17 3.3E-22 170.0 31.7 328 90-500 43-382 (387)
151 PRK11658 UDP-4-amino-4-deoxy-L 99.8 5.5E-18 1.2E-22 172.4 27.1 245 110-399 31-277 (379)
152 PRK00950 histidinol-phosphate 99.8 8.2E-18 1.8E-22 170.5 28.3 283 120-499 73-360 (361)
153 PRK06358 threonine-phosphate d 99.8 2E-17 4.3E-22 167.1 30.9 286 121-499 59-353 (354)
154 COG0399 WecE Predicted pyridox 99.8 1.1E-17 2.5E-22 165.2 27.7 336 91-501 15-373 (374)
155 KOG0257 Kynurenine aminotransf 99.8 2.3E-18 4.9E-23 166.9 21.7 369 58-497 18-415 (420)
156 cd00614 CGS_like CGS_like: Cys 99.8 3.2E-18 6.9E-23 173.6 24.1 234 110-416 38-294 (369)
157 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 1.9E-19 4E-24 180.3 14.6 232 120-405 70-329 (417)
158 PLN02607 1-aminocyclopropane-1 99.8 9.2E-18 2E-22 173.7 27.7 323 110-500 93-436 (447)
159 COG1003 GcvP Glycine cleavage 99.8 2.1E-17 4.6E-22 160.1 27.5 325 111-501 104-447 (496)
160 PRK10534 L-threonine aldolase; 99.8 8E-18 1.7E-22 168.7 25.5 311 90-500 14-332 (333)
161 TIGR01328 met_gam_lyase methio 99.8 1.3E-17 2.8E-22 169.9 27.2 222 110-402 57-283 (391)
162 PRK04870 histidinol-phosphate 99.8 2.6E-17 5.6E-22 166.5 29.3 313 88-498 39-355 (356)
163 PRK02731 histidinol-phosphate 99.8 2.5E-17 5.5E-22 167.3 29.4 289 120-500 71-365 (367)
164 TIGR03588 PseC UDP-4-keto-6-de 99.8 2.1E-17 4.5E-22 168.6 28.3 338 94-498 13-379 (380)
165 PRK05968 hypothetical protein; 99.8 1.4E-17 3E-22 169.7 26.9 231 111-415 62-310 (389)
166 PRK03158 histidinol-phosphate 99.8 2.6E-17 5.7E-22 166.7 28.5 306 93-498 47-358 (359)
167 PRK15029 arginine decarboxylas 99.8 5.1E-17 1.1E-21 174.1 31.8 175 120-317 209-402 (755)
168 PRK06767 methionine gamma-lyas 99.8 1.3E-17 2.7E-22 170.0 26.0 233 110-415 59-308 (386)
169 PRK15481 transcriptional regul 99.8 3.5E-17 7.6E-22 169.8 29.7 303 107-500 116-430 (431)
170 PRK01688 histidinol-phosphate 99.8 5.6E-18 1.2E-22 170.8 23.0 283 119-496 60-351 (351)
171 PRK07504 O-succinylhomoserine 99.8 2.6E-17 5.7E-22 168.1 28.0 220 110-401 63-287 (398)
172 PRK08133 O-succinylhomoserine 99.8 3E-17 6.6E-22 167.3 28.1 220 110-402 59-283 (390)
173 PRK08134 O-acetylhomoserine am 99.8 4.7E-17 1E-21 167.2 28.9 241 110-402 62-319 (433)
174 PRK05166 histidinol-phosphate 99.8 4.3E-17 9.3E-22 165.8 28.4 289 120-500 75-370 (371)
175 TIGR03538 DapC_gpp succinyldia 99.8 9.7E-17 2.1E-21 164.5 30.8 326 89-498 42-392 (393)
176 PLN03026 histidinol-phosphate 99.8 6.3E-17 1.4E-21 164.9 28.9 287 120-498 90-379 (380)
177 PLN02271 serine hydroxymethylt 99.8 4.3E-17 9.4E-22 166.6 26.9 301 80-417 151-475 (586)
178 PRK03317 histidinol-phosphate 99.8 1.6E-16 3.5E-21 161.4 31.1 316 89-500 40-363 (368)
179 PLN02509 cystathionine beta-ly 99.8 3.5E-17 7.6E-22 168.5 25.8 216 117-402 134-355 (464)
180 PLN02242 methionine gamma-lyas 99.8 7.9E-17 1.7E-21 165.1 28.2 224 110-404 74-304 (418)
181 PRK09148 aminotransferase; Val 99.8 1.2E-16 2.7E-21 164.2 29.6 330 93-500 48-389 (405)
182 PRK08175 aminotransferase; Val 99.8 3.9E-16 8.5E-21 160.1 33.2 318 105-501 60-389 (395)
183 TIGR03576 pyridox_MJ0158 pyrid 99.8 1.1E-16 2.4E-21 160.2 28.5 331 56-498 7-344 (346)
184 cd00617 Tnase_like Tryptophana 99.8 8.2E-17 1.8E-21 164.4 27.9 326 103-501 44-408 (431)
185 PRK07908 hypothetical protein; 99.8 1.4E-16 3E-21 160.7 29.3 306 87-500 34-346 (349)
186 PRK07811 cystathionine gamma-s 99.8 6.3E-17 1.4E-21 164.8 27.0 220 110-402 59-284 (388)
187 PRK04635 histidinol-phosphate 99.8 2.9E-17 6.3E-22 165.9 24.3 282 121-498 65-352 (354)
188 PRK09105 putative aminotransfe 99.8 1.5E-16 3.3E-21 161.4 29.6 280 121-499 83-368 (370)
189 TIGR01324 cysta_beta_ly_B cyst 99.8 4.8E-17 1.1E-21 164.5 25.8 218 110-401 48-271 (377)
190 PRK08861 cystathionine gamma-s 99.8 5.5E-17 1.2E-21 164.3 26.2 220 110-402 51-276 (388)
191 PRK08114 cystathionine beta-ly 99.8 4.6E-17 1E-21 164.2 24.9 220 109-402 59-286 (395)
192 PLN02672 methionine S-methyltr 99.8 1.4E-16 2.9E-21 175.7 29.9 349 87-500 709-1079(1082)
193 PRK05613 O-acetylhomoserine am 99.8 1.4E-16 3.1E-21 163.5 28.3 244 110-402 67-328 (437)
194 PRK09028 cystathionine beta-ly 99.8 1.1E-16 2.3E-21 162.0 26.6 220 110-402 59-283 (394)
195 TIGR01329 cysta_beta_ly_E cyst 99.8 5.3E-17 1.2E-21 164.8 24.4 212 119-400 50-267 (378)
196 PRK08776 cystathionine gamma-s 99.8 1.4E-16 3.1E-21 162.7 27.6 213 121-402 65-283 (405)
197 PLN02368 alanine transaminase 99.8 2E-16 4.4E-21 161.6 28.7 281 89-413 82-393 (407)
198 PRK08248 O-acetylhomoserine am 99.8 7.9E-17 1.7E-21 165.6 25.4 241 110-402 62-319 (431)
199 PRK07050 cystathionine beta-ly 99.8 1.1E-16 2.3E-21 163.2 25.8 221 110-403 63-289 (394)
200 PRK07812 O-acetylhomoserine am 99.8 1.5E-16 3.2E-21 163.4 26.8 244 110-402 67-323 (436)
201 PRK08064 cystathionine beta-ly 99.8 1.1E-16 2.3E-21 163.2 25.4 217 110-400 52-274 (390)
202 PF02347 GDC-P: Glycine cleava 99.8 2.3E-16 5E-21 157.9 26.7 369 38-495 32-429 (429)
203 PRK02610 histidinol-phosphate 99.8 8.5E-16 1.8E-20 156.4 31.4 319 90-501 43-371 (374)
204 PRK08247 cystathionine gamma-s 99.8 1.3E-16 2.8E-21 161.6 25.1 232 110-415 50-288 (366)
205 PRK08574 cystathionine gamma-s 99.8 1.7E-16 3.7E-21 161.3 26.0 219 109-401 50-274 (385)
206 PRK08249 cystathionine gamma-s 99.8 2.4E-16 5.3E-21 160.7 27.1 221 109-402 61-286 (398)
207 PRK08045 cystathionine gamma-s 99.8 2.1E-16 4.5E-21 160.6 25.9 223 110-402 50-275 (386)
208 PRK06234 methionine gamma-lyas 99.8 3.3E-16 7.1E-21 160.2 27.5 220 110-402 62-290 (400)
209 TIGR01365 serC_2 phosphoserine 99.8 5.3E-17 1.1E-21 162.8 21.0 319 109-498 32-370 (374)
210 PRK04781 histidinol-phosphate 99.8 6.7E-16 1.4E-20 156.5 29.2 291 120-500 63-362 (364)
211 KOG1359 Glycine C-acetyltransf 99.8 1.2E-16 2.7E-21 147.0 21.3 297 114-501 110-412 (417)
212 TIGR01325 O_suc_HS_sulf O-succ 99.8 3E-16 6.4E-21 159.6 26.4 219 111-402 53-276 (380)
213 PRK01533 histidinol-phosphate 99.8 3.6E-16 7.8E-21 158.3 26.9 279 121-500 69-354 (366)
214 PRK07810 O-succinylhomoserine 99.8 5.6E-16 1.2E-20 158.3 28.2 220 110-402 68-293 (403)
215 PLN02452 phosphoserine transam 99.8 2.3E-16 5E-21 158.2 24.9 340 78-501 7-363 (365)
216 PRK08153 histidinol-phosphate 99.8 8.3E-16 1.8E-20 156.1 29.2 289 121-500 72-364 (369)
217 PRK07269 cystathionine gamma-s 99.8 1.4E-16 2.9E-21 160.6 22.8 234 109-415 51-288 (364)
218 PRK07590 L,L-diaminopimelate a 99.8 1.5E-15 3.2E-20 156.5 30.7 356 55-498 16-408 (409)
219 TIGR00461 gcvP glycine dehydro 99.8 2E-15 4.3E-20 164.2 32.8 364 38-496 31-426 (939)
220 TIGR01140 L_thr_O3P_dcar L-thr 99.7 5.2E-16 1.1E-20 155.2 26.0 273 119-495 50-329 (330)
221 cd00610 OAT_like Acetyl ornith 99.7 1.3E-15 2.8E-20 157.3 29.7 316 114-498 77-412 (413)
222 PRK07503 methionine gamma-lyas 99.7 6.7E-16 1.5E-20 158.0 27.1 221 110-402 63-289 (403)
223 PRK06084 O-acetylhomoserine am 99.7 9.3E-16 2E-20 157.5 28.2 241 110-402 56-314 (425)
224 TIGR02080 O_succ_thio_ly O-suc 99.7 6E-16 1.3E-20 157.1 26.2 223 110-402 49-274 (382)
225 PRK06425 histidinol-phosphate 99.7 1.3E-15 2.9E-20 152.4 28.3 279 120-499 44-331 (332)
226 PRK03321 putative aminotransfe 99.7 7.3E-16 1.6E-20 155.7 26.6 288 112-500 57-350 (352)
227 PRK05994 O-acetylhomoserine am 99.7 8.3E-16 1.8E-20 158.3 27.3 239 110-402 61-318 (427)
228 PTZ00376 aspartate aminotransf 99.7 1.4E-15 2.9E-20 156.5 28.1 328 91-500 50-402 (404)
229 PRK15400 lysine decarboxylase 99.7 9.7E-16 2.1E-20 162.6 27.5 324 121-500 200-558 (714)
230 PRK07865 N-succinyldiaminopime 99.7 1.1E-15 2.5E-20 155.0 27.1 309 91-496 43-363 (364)
231 PRK15399 lysine decarboxylase 99.7 5.1E-15 1.1E-19 157.1 32.6 232 121-404 200-456 (713)
232 PRK13578 ornithine decarboxyla 99.7 1.7E-15 3.6E-20 160.9 28.8 173 121-317 179-371 (720)
233 PF01041 DegT_DnrJ_EryC1: DegT 99.7 8.8E-16 1.9E-20 155.5 25.4 320 95-496 9-363 (363)
234 PRK03244 argD acetylornithine 99.7 4.8E-15 1E-19 152.3 31.2 292 119-501 88-394 (398)
235 cd01494 AAT_I Aspartate aminot 99.7 6.2E-17 1.3E-21 145.2 14.8 166 120-315 4-170 (170)
236 TIGR03539 DapC_actino succinyl 99.7 3.2E-15 7E-20 151.2 28.7 308 90-495 36-356 (357)
237 PRK09275 aspartate aminotransf 99.7 1.6E-15 3.5E-20 157.8 27.1 371 86-501 111-517 (527)
238 PRK00854 rocD ornithine--oxo-a 99.7 8.9E-15 1.9E-19 150.4 32.4 298 119-500 86-400 (401)
239 PRK07671 cystathionine beta-ly 99.7 1E-15 2.2E-20 155.2 24.9 219 110-402 48-272 (377)
240 PF01212 Beta_elim_lyase: Beta 99.7 1.7E-17 3.7E-22 160.9 11.3 254 100-409 17-282 (290)
241 PRK09257 aromatic amino acid a 99.7 3.3E-15 7.1E-20 153.3 28.9 325 91-498 47-395 (396)
242 PRK05939 hypothetical protein; 99.7 1.5E-15 3.2E-20 154.8 26.0 239 110-401 45-289 (397)
243 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 1.9E-15 4.1E-20 153.8 26.6 233 117-397 32-271 (375)
244 PRK06176 cystathionine gamma-s 99.7 1.8E-15 3.8E-20 153.6 26.1 219 110-402 48-272 (380)
245 KOG0256 1-aminocyclopropane-1- 99.7 1.9E-15 4E-20 145.5 24.5 323 109-500 118-460 (471)
246 PRK14809 histidinol-phosphate 99.7 7.8E-15 1.7E-19 148.5 30.5 303 93-500 48-356 (357)
247 PRK06460 hypothetical protein; 99.7 1.9E-15 4E-20 153.4 25.8 220 109-402 42-267 (376)
248 TIGR02379 ECA_wecE TDP-4-keto- 99.7 2.4E-15 5.2E-20 152.5 26.3 237 120-397 35-272 (376)
249 COG1167 ARO8 Transcriptional r 99.7 1.3E-14 2.8E-19 150.7 32.1 332 91-501 107-455 (459)
250 KOG1360 5-aminolevulinate synt 99.7 2.4E-15 5.1E-20 143.9 24.0 298 113-501 217-524 (570)
251 PRK05839 hypothetical protein; 99.7 6.6E-15 1.4E-19 149.8 29.2 317 90-500 39-373 (374)
252 PRK07582 cystathionine gamma-l 99.7 2E-15 4.4E-20 152.7 24.6 229 110-415 49-300 (366)
253 PRK04073 rocD ornithine--oxo-a 99.7 1.5E-14 3.2E-19 148.5 31.0 293 118-499 84-395 (396)
254 PRK15407 lipopolysaccharide bi 99.7 6.4E-15 1.4E-19 152.0 28.3 253 111-398 62-330 (438)
255 PRK05967 cystathionine beta-ly 99.7 2.3E-15 5.1E-20 152.1 24.5 232 110-415 62-316 (395)
256 PRK07392 threonine-phosphate d 99.7 2.1E-14 4.5E-19 145.5 31.2 289 115-500 60-358 (360)
257 TIGR03801 asp_4_decarbox aspar 99.7 5.2E-15 1.1E-19 153.8 27.1 365 89-501 108-516 (521)
258 PRK04311 selenocysteine syntha 99.7 1.8E-14 3.9E-19 148.5 30.0 193 87-317 96-308 (464)
259 TIGR03246 arg_catab_astC succi 99.7 2.9E-14 6.3E-19 146.1 31.3 301 118-501 79-395 (397)
260 PRK08637 hypothetical protein; 99.7 2.2E-14 4.7E-19 146.8 30.0 333 91-501 23-386 (388)
261 PTZ00125 ornithine aminotransf 99.7 4.1E-14 9E-19 145.5 32.0 304 117-501 74-395 (400)
262 COG0403 GcvP Glycine cleavage 99.7 4.5E-14 9.7E-19 137.4 29.7 375 38-498 40-447 (450)
263 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 8.8E-15 1.9E-19 150.6 26.4 239 110-402 55-311 (418)
264 PRK07505 hypothetical protein; 99.7 2.5E-14 5.5E-19 147.0 29.6 300 114-501 89-399 (402)
265 PRK06702 O-acetylhomoserine am 99.7 9.8E-15 2.1E-19 149.1 25.9 242 110-402 59-316 (432)
266 PRK06434 cystathionine gamma-l 99.7 6.6E-15 1.4E-19 148.7 23.9 232 108-415 60-308 (384)
267 TIGR00474 selA seryl-tRNA(sec) 99.7 3.9E-14 8.5E-19 145.6 29.3 163 118-317 124-303 (454)
268 PLN02397 aspartate transaminas 99.7 4.9E-14 1.1E-18 145.5 30.1 323 92-500 70-420 (423)
269 PRK03967 histidinol-phosphate 99.7 7.2E-14 1.6E-18 140.2 30.0 283 106-501 50-334 (337)
270 TIGR02618 tyr_phenol_ly tyrosi 99.7 1.1E-13 2.4E-18 139.4 31.0 320 106-500 65-425 (450)
271 PRK14808 histidinol-phosphate 99.7 5.4E-14 1.2E-18 140.8 28.7 298 90-498 34-334 (335)
272 TIGR00707 argD acetylornithine 99.7 7.2E-14 1.6E-18 142.6 30.0 297 116-498 69-378 (379)
273 COG2873 MET17 O-acetylhomoseri 99.7 7.9E-14 1.7E-18 133.2 27.3 244 108-403 58-318 (426)
274 COG3844 Kynureninase [Amino ac 99.7 2.3E-14 5E-19 134.2 23.1 313 112-501 72-402 (407)
275 PF00464 SHMT: Serine hydroxym 99.7 1.7E-14 3.7E-19 144.1 23.8 286 80-416 23-339 (399)
276 PRK09440 avtA valine--pyruvate 99.7 3.9E-14 8.3E-19 146.4 27.4 336 90-501 47-411 (416)
277 PRK01278 argD acetylornithine 99.7 1.5E-13 3.3E-18 140.7 30.7 299 118-502 75-389 (389)
278 TIGR01885 Orn_aminotrans ornit 99.7 4.9E-13 1.1E-17 137.4 34.4 305 116-499 79-400 (401)
279 PRK12462 phosphoserine aminotr 99.7 1.4E-14 3E-19 143.9 21.8 338 79-501 5-362 (364)
280 COG0079 HisC Histidinol-phosph 99.7 1.3E-13 2.8E-18 137.8 28.7 286 120-501 61-354 (356)
281 PRK08354 putative aminotransfe 99.6 7E-14 1.5E-18 138.7 25.8 148 121-314 45-196 (311)
282 PF01053 Cys_Met_Meta_PP: Cys/ 99.6 6.4E-14 1.4E-18 141.2 25.6 236 109-416 52-311 (386)
283 PRK02936 argD acetylornithine 99.6 3.1E-13 6.7E-18 137.9 31.0 290 115-498 70-376 (377)
284 PRK05093 argD bifunctional N-s 99.6 6.8E-13 1.5E-17 136.5 32.5 300 119-501 85-400 (403)
285 TIGR03542 DAPAT_plant LL-diami 99.6 2.6E-13 5.7E-18 139.5 29.1 328 89-498 47-401 (402)
286 PRK02627 acetylornithine amino 99.6 4.8E-13 1E-17 137.4 30.6 300 115-502 80-395 (396)
287 PRK13237 tyrosine phenol-lyase 99.6 1.1E-12 2.3E-17 132.7 31.5 251 105-407 71-345 (460)
288 KOG1357 Serine palmitoyltransf 99.6 2E-14 4.4E-19 139.9 18.0 340 75-500 142-501 (519)
289 PLN02624 ornithine-delta-amino 99.6 1.6E-12 3.6E-17 135.7 33.2 307 117-500 118-443 (474)
290 COG0112 GlyA Glycine/serine hy 99.6 2.5E-13 5.4E-18 131.2 24.7 255 108-416 64-323 (413)
291 PRK03715 argD acetylornithine 99.6 7.6E-13 1.6E-17 135.2 29.1 308 115-501 77-393 (395)
292 PRK07049 methionine gamma-lyas 99.6 6.5E-13 1.4E-17 136.8 28.5 225 110-402 81-317 (427)
293 PRK05664 threonine-phosphate d 99.6 9.7E-13 2.1E-17 131.6 27.8 269 120-501 53-328 (330)
294 PRK12381 bifunctional succinyl 99.6 1.2E-12 2.6E-17 134.6 28.6 299 119-501 84-399 (406)
295 PRK06959 putative threonine-ph 99.6 1E-12 2.2E-17 131.8 27.0 272 119-501 56-333 (339)
296 KOG0630 Predicted pyridoxal-de 99.6 5.8E-14 1.2E-18 137.5 15.8 265 114-403 163-440 (838)
297 PRK05964 adenosylmethionine--8 99.6 6.9E-12 1.5E-16 129.7 32.4 319 116-502 85-423 (423)
298 PRK11522 putrescine--2-oxoglut 99.6 5.8E-12 1.3E-16 130.6 31.3 310 116-501 124-451 (459)
299 PF05889 SLA_LP_auto_ag: Solub 99.5 3.6E-13 7.9E-18 131.8 19.0 319 113-500 53-389 (389)
300 PRK04260 acetylornithine amino 99.5 7.2E-12 1.6E-16 127.7 28.9 278 142-498 86-374 (375)
301 PRK12566 glycine dehydrogenase 99.5 5.6E-12 1.2E-16 136.7 29.1 362 38-496 46-439 (954)
302 KOG0634 Aromatic amino acid am 99.5 1.5E-11 3.3E-16 119.8 28.8 332 106-501 94-466 (472)
303 TIGR03372 putres_am_tran putre 99.5 6.4E-11 1.4E-15 122.1 33.7 306 116-498 117-441 (442)
304 PLN02760 4-aminobutyrate:pyruv 99.5 4.4E-11 9.5E-16 125.3 31.6 333 115-501 132-491 (504)
305 PRK09264 diaminobutyrate--2-ox 99.5 7.2E-11 1.6E-15 122.0 32.0 313 116-501 82-416 (425)
306 COG0001 HemL Glutamate-1-semia 99.5 4.6E-11 1E-15 118.5 28.3 309 115-501 92-428 (432)
307 COG0626 MetC Cystathionine bet 99.5 2.8E-11 6E-16 120.8 27.0 235 109-416 60-319 (396)
308 COG0160 GabT 4-aminobutyrate a 99.5 1.5E-10 3.3E-15 117.0 32.5 319 117-501 100-445 (447)
309 PRK08117 4-aminobutyrate amino 99.5 1.1E-10 2.4E-15 121.1 32.5 317 116-501 86-429 (433)
310 PRK04612 argD acetylornithine 99.5 2.9E-10 6.3E-15 116.6 34.4 304 117-501 83-403 (408)
311 COG1982 LdcC Arginine/lysine/o 99.5 8.1E-12 1.8E-16 127.8 22.5 231 121-405 75-321 (557)
312 TIGR00713 hemL glutamate-1-sem 99.5 3.1E-11 6.8E-16 125.0 26.9 310 119-502 91-423 (423)
313 COG4992 ArgD Ornithine/acetylo 99.5 4.7E-11 1E-15 117.2 26.1 293 118-501 86-398 (404)
314 PRK08088 4-aminobutyrate amino 99.4 1.8E-10 3.9E-15 119.2 31.5 315 118-501 86-423 (425)
315 PRK06058 4-aminobutyrate amino 99.4 7.3E-10 1.6E-14 115.1 34.6 320 116-502 99-443 (443)
316 TIGR02407 ectoine_ectB diamino 99.4 3.3E-10 7.1E-15 116.6 31.6 315 115-501 77-412 (412)
317 PRK06541 hypothetical protein; 99.4 4.9E-10 1.1E-14 116.5 33.0 330 116-501 95-455 (460)
318 PRK06777 4-aminobutyrate amino 99.4 7.9E-10 1.7E-14 114.1 33.9 314 118-500 85-420 (421)
319 TIGR00700 GABAtrnsam 4-aminobu 99.4 7.1E-10 1.5E-14 114.6 33.3 312 118-500 78-419 (420)
320 PRK08360 4-aminobutyrate amino 99.4 9.6E-10 2.1E-14 113.9 34.2 317 116-501 84-426 (443)
321 PRK00062 glutamate-1-semialdeh 99.4 2.4E-10 5.2E-15 118.2 29.6 312 116-501 90-424 (426)
322 PRK05769 4-aminobutyrate amino 99.4 1.3E-09 2.8E-14 113.0 34.7 315 116-501 97-439 (441)
323 PRK12403 putative aminotransfe 99.4 1.2E-09 2.7E-14 113.7 34.7 327 115-501 97-452 (460)
324 PLN02482 glutamate-1-semialdeh 99.4 4.9E-10 1.1E-14 116.5 30.8 312 115-502 138-474 (474)
325 PLN00144 acetylornithine trans 99.4 7.8E-10 1.7E-14 112.7 31.6 302 116-501 57-380 (382)
326 PRK09221 beta alanine--pyruvat 99.4 1.1E-09 2.3E-14 113.7 32.8 324 117-501 93-443 (445)
327 KOG2040 Glycine dehydrogenase 99.4 6.5E-11 1.4E-15 119.9 22.5 327 112-501 578-918 (1001)
328 PRK12389 glutamate-1-semialdeh 99.4 8.7E-10 1.9E-14 114.0 31.4 310 116-502 93-428 (428)
329 PRK06062 hypothetical protein; 99.4 1.3E-09 2.9E-14 113.1 32.3 323 115-501 94-445 (451)
330 PRK13360 omega amino acid--pyr 99.4 9.5E-10 2.1E-14 113.9 30.9 325 116-501 89-440 (442)
331 PRK06105 aminotransferase; Pro 99.4 1.2E-09 2.5E-14 113.8 31.7 332 115-501 91-449 (460)
332 KOG0258 Alanine aminotransfera 99.4 1.2E-09 2.5E-14 105.3 28.7 165 94-277 95-262 (475)
333 KOG0053 Cystathionine beta-lya 99.4 1.7E-10 3.8E-15 113.7 23.6 219 110-401 75-299 (409)
334 PRK05639 4-aminobutyrate amino 99.4 1.4E-09 3.1E-14 112.9 31.7 314 117-500 97-442 (457)
335 TIGR02617 tnaA_trp_ase tryptop 99.4 3.3E-10 7.2E-15 113.4 25.7 251 104-403 66-350 (467)
336 PRK07678 aminotransferase; Val 99.4 3.8E-09 8.2E-14 109.8 34.4 327 117-502 90-450 (451)
337 PRK08593 4-aminobutyrate amino 99.3 6.4E-09 1.4E-13 108.0 35.0 318 116-501 85-429 (445)
338 PRK07495 4-aminobutyrate amino 99.3 5.9E-09 1.3E-13 107.5 34.4 317 116-501 83-421 (425)
339 PRK05965 hypothetical protein; 99.3 3.9E-09 8.5E-14 109.9 33.0 329 116-501 90-447 (459)
340 PRK00615 glutamate-1-semialdeh 99.3 1.2E-09 2.5E-14 112.7 28.6 319 116-501 93-428 (433)
341 PRK09792 4-aminobutyrate trans 99.3 3E-09 6.4E-14 109.8 31.0 314 116-500 83-420 (421)
342 PRK06918 4-aminobutyrate amino 99.3 5.1E-09 1.1E-13 109.1 32.5 316 116-501 97-443 (451)
343 KOG1358 Serine palmitoyltransf 99.3 1.3E-10 2.9E-15 111.7 18.5 305 120-501 143-465 (467)
344 PRK06943 adenosylmethionine--8 99.3 1.6E-08 3.4E-13 105.1 35.0 315 117-501 98-446 (453)
345 PRK07481 hypothetical protein; 99.3 7.9E-09 1.7E-13 107.4 32.7 331 116-501 86-445 (449)
346 KOG2467 Glycine/serine hydroxy 99.3 2E-09 4.3E-14 102.8 25.5 272 110-419 80-363 (477)
347 PRK07036 hypothetical protein; 99.3 7.5E-09 1.6E-13 107.9 32.6 325 115-501 94-452 (466)
348 PRK07482 hypothetical protein; 99.3 1.3E-08 2.8E-13 106.1 33.7 332 115-501 93-454 (461)
349 PRK06149 hypothetical protein; 99.3 7.4E-09 1.6E-13 117.2 34.3 319 117-501 625-970 (972)
350 PRK07480 putative aminotransfe 99.3 9.4E-09 2E-13 106.9 32.5 327 116-501 94-448 (456)
351 TIGR00709 dat 2,4-diaminobutyr 99.3 1.2E-08 2.6E-13 105.9 32.9 326 115-501 81-435 (442)
352 PRK07986 adenosylmethionine--8 99.3 4.2E-09 9.2E-14 108.5 28.7 315 116-501 86-423 (428)
353 PRK06082 4-aminobutyrate amino 99.3 1.7E-08 3.8E-13 105.0 33.4 315 115-501 112-451 (459)
354 PRK04013 argD acetylornithine/ 99.3 8.2E-09 1.8E-13 104.0 29.8 277 120-501 70-360 (364)
355 PRK07030 adenosylmethionine--8 99.3 1.6E-08 3.4E-13 105.4 32.2 327 115-501 89-446 (466)
356 TIGR00699 GABAtrns_euk 4-amino 99.3 1E-08 2.3E-13 106.0 30.4 289 142-498 124-463 (464)
357 PRK06938 diaminobutyrate--2-ox 99.3 1.2E-08 2.6E-13 106.2 30.9 328 116-501 106-460 (464)
358 PRK07046 aminotransferase; Val 99.2 9.5E-09 2.1E-13 106.7 29.8 306 115-501 114-450 (453)
359 TIGR00508 bioA adenosylmethion 99.2 1E-08 2.2E-13 106.0 29.8 312 118-501 90-426 (427)
360 PRK08297 L-lysine aminotransfe 99.2 1.6E-08 3.5E-13 104.8 31.1 311 119-502 95-442 (443)
361 PRK06148 hypothetical protein; 99.2 2.8E-08 6.1E-13 112.6 35.4 321 116-501 663-1010(1013)
362 PRK06173 adenosylmethionine--8 99.2 1.6E-08 3.4E-13 104.4 30.4 315 116-501 87-425 (429)
363 PRK05630 adenosylmethionine--8 99.2 1.2E-08 2.6E-13 105.1 29.5 310 117-501 84-420 (422)
364 PRK06917 hypothetical protein; 99.2 5.6E-08 1.2E-12 100.9 34.4 333 115-501 73-437 (447)
365 PRK06916 adenosylmethionine--8 99.2 3.7E-08 7.9E-13 102.7 32.2 330 116-501 99-455 (460)
366 PRK07483 hypothetical protein; 99.2 7.5E-08 1.6E-12 99.9 34.3 330 116-501 73-437 (443)
367 PRK08742 adenosylmethionine--8 99.2 3.1E-08 6.8E-13 103.2 31.4 329 116-501 107-467 (472)
368 PRK06931 diaminobutyrate--2-ox 99.2 3.2E-08 7E-13 103.0 31.5 328 115-501 100-454 (459)
369 TIGR03251 LAT_fam L-lysine 6-t 99.2 5.3E-08 1.2E-12 100.8 30.3 292 142-498 105-431 (431)
370 PRK06209 glutamate-1-semialdeh 99.1 1.9E-08 4.1E-13 104.1 26.0 172 116-316 88-266 (431)
371 COG1932 SerC Phosphoserine ami 99.1 1.1E-08 2.3E-13 98.8 22.0 304 111-501 45-363 (365)
372 COG3977 Alanine-alpha-ketoisov 99.1 1.2E-08 2.7E-13 95.0 20.7 318 104-500 66-410 (417)
373 KOG1404 Alanine-glyoxylate ami 99.1 2E-07 4.4E-12 90.3 27.3 291 142-495 111-432 (442)
374 COG0161 BioA Adenosylmethionin 99.0 3.6E-07 7.7E-12 92.3 27.9 321 121-501 92-443 (449)
375 KOG0633 Histidinol phosphate a 98.9 8.2E-08 1.8E-12 87.9 17.3 277 143-498 89-374 (375)
376 KOG1402 Ornithine aminotransfe 98.9 5.8E-07 1.2E-11 85.2 23.3 298 120-499 105-425 (427)
377 KOG3846 L-kynurenine hydrolase 98.9 3.6E-07 7.9E-12 85.6 21.7 338 118-501 113-461 (465)
378 KOG1401 Acetylornithine aminot 98.9 1.6E-06 3.5E-11 84.7 26.8 224 142-398 118-354 (433)
379 PLN02974 adenosylmethionine-8- 98.9 6.9E-06 1.5E-10 90.4 33.4 234 218-499 567-816 (817)
380 COG1921 SelA Selenocysteine sy 98.8 3E-07 6.6E-12 90.6 17.5 149 142-319 85-239 (395)
381 COG1448 TyrB Aspartate/tyrosin 98.8 4.2E-06 9E-11 81.5 24.7 279 142-498 96-395 (396)
382 PF00202 Aminotran_3: Aminotra 98.7 3.5E-06 7.7E-11 84.4 23.5 188 116-317 59-262 (339)
383 PF12897 Aminotran_MocR: Alani 98.6 1.6E-05 3.4E-10 77.8 24.1 304 120-499 73-413 (425)
384 COG3033 TnaA Tryptophanase [Am 98.6 2.6E-05 5.6E-10 75.1 22.9 189 106-318 73-284 (471)
385 KOG3843 Predicted serine hydro 98.5 1.6E-06 3.5E-11 79.7 11.9 237 113-395 54-295 (432)
386 PF03841 SelA: L-seryl-tRNA se 98.3 5.8E-07 1.3E-11 88.0 5.0 161 120-317 51-228 (367)
387 PF06838 Met_gamma_lyase: Meth 98.2 0.00065 1.4E-08 66.3 23.1 164 121-321 59-243 (403)
388 KOG2790 Phosphoserine aminotra 98.2 0.00032 6.9E-09 65.6 19.6 338 88-501 18-368 (370)
389 KOG2040 Glycine dehydrogenase 98.0 0.0033 7.1E-08 65.2 24.1 364 38-496 85-478 (1001)
390 KOG1403 Predicted alanine-glyo 97.6 0.013 2.9E-07 55.4 19.5 301 142-499 104-435 (452)
391 KOG1405 4-aminobutyrate aminot 97.4 0.012 2.5E-07 57.2 16.6 220 216-501 254-483 (484)
392 KOG1412 Aspartate aminotransfe 97.3 0.048 1E-06 52.1 19.9 281 142-500 101-404 (410)
393 PF04864 Alliinase_C: Allinase 96.8 0.028 6.2E-07 54.7 13.6 293 115-498 46-362 (363)
394 COG4100 Cystathionine beta-lya 96.5 0.024 5.3E-07 53.8 10.1 147 124-304 73-236 (416)
395 KOG1411 Aspartate aminotransfe 95.3 0.076 1.6E-06 51.6 8.1 259 174-500 145-424 (427)
396 PLN02994 1-aminocyclopropane-1 92.7 0.26 5.7E-06 43.1 5.7 63 108-186 88-152 (153)
397 cd01455 vWA_F11C1-5a_type Von 71.4 12 0.00027 33.9 6.2 53 218-270 95-149 (191)
398 COG0386 BtuE Glutathione perox 67.3 45 0.00098 29.0 8.4 95 201-304 27-133 (162)
399 TIGR03679 arCOG00187 arCOG0018 65.1 83 0.0018 29.2 10.7 67 187-267 47-116 (218)
400 COG1066 Sms Predicted ATP-depe 63.2 81 0.0018 32.3 10.6 131 175-318 121-274 (456)
401 PF06506 PrpR_N: Propionate ca 57.0 64 0.0014 28.8 8.2 69 175-267 79-147 (176)
402 COG2515 Acd 1-aminocyclopropan 54.9 87 0.0019 30.6 8.9 120 142-275 65-192 (323)
403 TIGR03573 WbuX N-acetyl sugar 54.8 2.3E+02 0.0051 28.3 13.2 104 142-274 62-171 (343)
404 TIGR01361 DAHP_synth_Bsub phos 52.1 1.4E+02 0.0029 28.7 9.9 83 184-275 120-206 (260)
405 PF07071 DUF1341: Protein of u 52.0 62 0.0013 29.4 6.9 69 187-268 136-207 (218)
406 TIGR02189 GlrX-like_plant Glut 51.0 88 0.0019 24.9 7.2 72 174-255 8-81 (99)
407 PRK13397 3-deoxy-7-phosphohept 50.3 1.5E+02 0.0032 28.2 9.7 83 184-276 110-197 (250)
408 COG1954 GlpP Glycerol-3-phosph 50.2 16 0.00036 32.1 3.0 49 216-275 12-62 (181)
409 COG0300 DltE Short-chain dehyd 49.9 1.9E+02 0.0042 27.8 10.4 78 174-259 30-112 (265)
410 cd00951 KDGDH 5-dehydro-4-deox 49.0 49 0.0011 32.2 6.6 57 212-268 15-74 (289)
411 PRK04147 N-acetylneuraminate l 47.3 25 0.00054 34.3 4.2 52 211-262 17-69 (293)
412 cd00950 DHDPS Dihydrodipicolin 46.3 38 0.00082 32.8 5.3 52 211-262 14-65 (284)
413 COG0108 RibB 3,4-dihydroxy-2-b 46.2 48 0.001 30.2 5.4 49 219-268 142-190 (203)
414 PRK05872 short chain dehydroge 45.7 2.2E+02 0.0047 27.5 10.7 68 177-250 35-102 (296)
415 PF03162 Y_phosphatase2: Tyros 44.9 39 0.00084 29.9 4.6 72 175-249 34-108 (164)
416 PRK12595 bifunctional 3-deoxy- 44.8 2.1E+02 0.0045 29.0 10.3 59 215-275 236-299 (360)
417 COG2870 RfaE ADP-heptose synth 44.7 54 0.0012 33.3 5.9 97 179-284 95-198 (467)
418 PRK10638 glutaredoxin 3; Provi 44.4 1.3E+02 0.0028 22.8 7.1 69 175-256 3-73 (83)
419 cd01994 Alpha_ANH_like_IV This 44.2 2.5E+02 0.0054 25.5 11.6 67 187-267 49-118 (194)
420 COG0329 DapA Dihydrodipicolina 42.6 34 0.00074 33.5 4.3 51 212-262 19-69 (299)
421 PRK13396 3-deoxy-7-phosphohept 42.3 2E+02 0.0044 28.8 9.7 83 185-276 197-284 (352)
422 COG1748 LYS9 Saccharopine dehy 42.2 3E+02 0.0066 28.1 11.0 130 143-298 4-154 (389)
423 PF00926 DHBP_synthase: 3,4-di 41.7 54 0.0012 29.8 5.1 51 216-267 135-185 (194)
424 COG1606 ATP-utilizing enzymes 41.4 56 0.0012 30.9 5.2 98 143-275 21-125 (269)
425 smart00642 Aamy Alpha-amylase 41.4 55 0.0012 29.0 5.1 30 243-272 63-92 (166)
426 PRK05876 short chain dehydroge 41.3 2.7E+02 0.006 26.5 10.5 44 201-249 56-99 (275)
427 PF08659 KR: KR domain; Inter 41.2 2.2E+02 0.0048 25.2 9.2 69 175-251 26-99 (181)
428 PRK03170 dihydrodipicolinate s 40.9 53 0.0012 32.0 5.4 52 211-262 15-66 (292)
429 TIGR00381 cdhD CO dehydrogenas 40.9 1.4E+02 0.0031 30.2 8.3 65 190-270 182-247 (389)
430 COG3453 Uncharacterized protei 39.1 1.2E+02 0.0027 25.2 6.2 76 182-264 44-127 (130)
431 COG0367 AsnB Asparagine syntha 38.9 2.6E+02 0.0056 30.0 10.6 120 114-270 212-339 (542)
432 cd00952 CHBPH_aldolase Trans-o 38.9 55 0.0012 32.2 5.2 51 212-262 23-73 (309)
433 TIGR03581 EF_0839 conserved hy 38.8 1.2E+02 0.0027 28.0 6.8 70 187-269 136-208 (236)
434 TIGR02026 BchE magnesium-proto 38.8 1.3E+02 0.0028 31.9 8.3 63 201-274 39-103 (497)
435 TIGR01244 conserved hypothetic 38.6 1.7E+02 0.0036 24.8 7.5 68 189-264 50-126 (135)
436 cd00886 MogA_MoaB MogA_MoaB fa 37.9 1.5E+02 0.0034 25.5 7.4 62 186-257 23-84 (152)
437 TIGR03249 KdgD 5-dehydro-4-deo 37.5 67 0.0015 31.4 5.5 52 211-262 19-70 (296)
438 PLN02417 dihydrodipicolinate s 37.5 66 0.0014 31.1 5.4 52 211-262 15-66 (280)
439 PRK08265 short chain dehydroge 36.9 3.3E+02 0.0072 25.5 10.3 58 177-243 33-90 (261)
440 KOG0630 Predicted pyridoxal-de 36.9 2.2E+02 0.0047 29.8 8.9 57 441-500 636-693 (838)
441 PF00701 DHDPS: Dihydrodipicol 36.9 59 0.0013 31.6 5.1 57 212-268 16-75 (289)
442 PRK03620 5-dehydro-4-deoxygluc 36.4 64 0.0014 31.6 5.2 58 211-268 21-81 (303)
443 COG0296 GlgB 1,4-alpha-glucan 36.0 25 0.00054 38.0 2.4 65 195-275 175-239 (628)
444 cd00408 DHDPS-like Dihydrodipi 35.9 53 0.0012 31.7 4.5 57 204-262 6-62 (281)
445 TIGR00506 ribB 3,4-dihydroxy-2 35.7 90 0.0019 28.6 5.6 50 217-267 141-190 (199)
446 PF02603 Hpr_kinase_N: HPr Ser 35.6 43 0.00093 28.1 3.3 47 214-268 64-110 (127)
447 COG1105 FruK Fructose-1-phosph 34.9 58 0.0012 32.0 4.4 59 213-272 109-168 (310)
448 TIGR00674 dapA dihydrodipicoli 34.5 69 0.0015 31.1 5.0 58 203-262 6-63 (285)
449 PRK06139 short chain dehydroge 34.4 3.5E+02 0.0077 26.7 10.2 45 201-250 57-101 (330)
450 PRK08263 short chain dehydroge 34.4 3.9E+02 0.0085 25.2 10.4 44 201-249 50-93 (275)
451 TIGR02313 HpaI-NOT-DapA 2,4-di 34.3 83 0.0018 30.7 5.6 55 205-261 10-64 (294)
452 cd02007 TPP_DXS Thiamine pyrop 34.2 2.6E+02 0.0057 25.3 8.5 42 189-240 147-188 (195)
453 PF14488 DUF4434: Domain of un 34.1 1.5E+02 0.0032 26.2 6.6 56 214-269 16-84 (166)
454 PLN02672 methionine S-methyltr 33.9 5.8E+02 0.012 30.0 12.7 151 93-271 407-565 (1082)
455 KOG1394 3-oxoacyl-(acyl-carrie 33.2 4.3E+02 0.0092 26.6 9.9 89 176-266 260-353 (440)
456 cd00758 MoCF_BD MoCF_BD: molyb 33.0 1.9E+02 0.0041 24.3 6.9 62 184-257 20-81 (133)
457 COG0159 TrpA Tryptophan syntha 33.0 3.8E+02 0.0083 25.7 9.5 68 187-268 138-210 (265)
458 PRK08643 acetoin reductase; Va 32.8 3.7E+02 0.0081 24.9 9.8 44 201-249 52-95 (256)
459 smart00852 MoCF_biosynth Proba 32.7 2.2E+02 0.0049 23.8 7.4 61 184-256 19-79 (135)
460 PRK00724 formate dehydrogenase 32.6 1.9E+02 0.004 27.8 7.6 73 176-267 171-247 (263)
461 PF03599 CdhD: CO dehydrogenas 32.5 1.4E+02 0.0031 30.3 6.9 44 216-269 107-150 (386)
462 COG2102 Predicted ATPases of P 32.4 2.8E+02 0.0061 25.8 8.2 101 143-267 4-116 (223)
463 PF10022 DUF2264: Uncharacteri 32.1 3.7E+02 0.008 27.2 9.8 125 5-132 2-148 (361)
464 COG1184 GCD2 Translation initi 31.9 4.2E+02 0.0092 25.9 9.7 100 141-269 120-227 (301)
465 TIGR00683 nanA N-acetylneurami 31.9 95 0.002 30.3 5.5 52 211-262 14-66 (290)
466 PRK00910 ribB 3,4-dihydroxy-2- 31.9 1.1E+02 0.0024 28.3 5.6 46 220-266 155-200 (218)
467 cd00954 NAL N-Acetylneuraminic 31.8 86 0.0019 30.5 5.3 52 211-262 14-66 (288)
468 TIGR01536 asn_synth_AEB aspara 31.8 6.1E+02 0.013 26.4 12.7 122 114-270 235-363 (467)
469 TIGR00177 molyb_syn molybdenum 31.8 2.7E+02 0.0059 23.7 7.8 62 184-257 28-89 (144)
470 TIGR01275 ACC_deam_rel pyridox 31.7 2.4E+02 0.0052 27.6 8.5 55 143-207 58-113 (311)
471 PF00106 adh_short: short chai 31.6 3.3E+02 0.007 23.2 9.1 47 201-252 53-99 (167)
472 PRK00014 ribB 3,4-dihydroxy-2- 31.4 1.1E+02 0.0024 28.5 5.5 45 221-266 160-204 (230)
473 PRK07067 sorbitol dehydrogenas 31.4 4.3E+02 0.0093 24.5 10.6 60 177-244 32-91 (257)
474 KOG1201 Hydroxysteroid 17-beta 31.4 5.1E+02 0.011 25.4 10.2 83 142-242 40-123 (300)
475 PRK07062 short chain dehydroge 31.1 4.3E+02 0.0094 24.6 10.0 40 201-245 60-99 (265)
476 PRK05867 short chain dehydroge 31.0 4.2E+02 0.009 24.6 9.8 40 201-245 59-98 (253)
477 PRK11889 flhF flagellar biosyn 30.9 3.2E+02 0.0068 28.2 9.0 58 216-274 304-364 (436)
478 COG0299 PurN Folate-dependent 30.8 4.2E+02 0.009 24.2 10.0 69 144-228 6-75 (200)
479 PRK01792 ribB 3,4-dihydroxy-2- 30.8 1.2E+02 0.0026 28.1 5.5 49 218-267 152-200 (214)
480 PF12162 STAT1_TAZ2bind: STAT1 30.7 54 0.0012 18.5 2.0 14 1-14 7-20 (23)
481 PF09106 SelB-wing_2: Elongati 30.7 84 0.0018 22.2 3.7 46 16-66 1-47 (59)
482 PRK11633 cell division protein 30.1 2E+02 0.0044 26.9 7.1 49 448-498 163-213 (226)
483 COG4019 Uncharacterized protei 29.7 1.6E+02 0.0034 24.6 5.4 86 216-316 25-116 (156)
484 PF03435 Saccharop_dh: Sacchar 29.7 2.6E+02 0.0056 28.3 8.6 72 177-270 25-97 (386)
485 PRK03353 ribB 3,4-dihydroxy-2- 29.6 1.3E+02 0.0028 28.0 5.6 49 220-270 154-202 (217)
486 PF05670 DUF814: Domain of unk 29.2 38 0.00081 26.5 1.8 25 253-277 20-45 (90)
487 PF05368 NmrA: NmrA-like famil 29.1 2.4E+02 0.0051 26.0 7.6 76 175-268 24-99 (233)
488 PF01972 SDH_sah: Serine dehyd 29.0 2.8E+02 0.0061 26.8 7.8 78 214-304 71-152 (285)
489 PF01645 Glu_synthase: Conserv 28.8 3.6E+02 0.0078 27.3 9.0 79 188-275 160-240 (368)
490 PRK05650 short chain dehydroge 28.8 4E+02 0.0086 25.1 9.4 46 201-251 50-95 (270)
491 PRK12481 2-deoxy-D-gluconate 3 28.7 4.8E+02 0.01 24.2 10.8 42 201-247 56-97 (251)
492 PF00128 Alpha-amylase: Alpha 28.7 32 0.00068 33.3 1.6 32 242-273 44-75 (316)
493 PF02638 DUF187: Glycosyl hydr 28.4 1.3E+02 0.0028 29.7 5.8 19 249-267 69-87 (311)
494 PLN02331 phosphoribosylglycina 28.4 4E+02 0.0088 24.5 8.7 71 144-226 5-76 (207)
495 PRK08057 cobalt-precorrin-6x r 28.3 50 0.0011 31.4 2.8 28 246-273 48-75 (248)
496 PRK07109 short chain dehydroge 28.3 5E+02 0.011 25.6 10.2 44 201-249 58-101 (334)
497 KOG0622 Ornithine decarboxylas 27.9 4.1E+02 0.0088 27.3 9.0 82 174-269 123-217 (448)
498 PRK05854 short chain dehydroge 27.8 4.8E+02 0.01 25.4 9.9 38 201-243 66-103 (313)
499 TIGR01289 LPOR light-dependent 27.6 4.7E+02 0.01 25.5 9.8 62 176-243 30-91 (314)
500 PRK12936 3-ketoacyl-(acyl-carr 27.4 4.8E+02 0.01 23.8 10.6 64 177-248 32-95 (245)
No 1
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=4.5e-95 Score=751.15 Aligned_cols=478 Identities=56% Similarity=1.025 Sum_probs=445.3
Q ss_pred CCccCHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCC
Q 037144 1 MDQAYAQEFRRQGHMFVDFMAEYYKNIDK----YPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQS 76 (502)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~ 76 (502)
|.+|++|+||+++++++|++.+|++++.+ +||.+.++|++|+++++..+|++|++++++++++.+.+.|+.++|+|
T Consensus 51 ~~~m~~~~~r~~~~~~~d~i~~~~~~~~~~~~~~pv~~~~~p~~l~~~l~~~~P~~g~~~~~il~~~~~~i~p~~~~~~h 130 (539)
T PLN02590 51 MKPMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLDDVSKKIMPGITHWQS 130 (539)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCChHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCcCCC
Confidence 35699999999999999999999999887 79999999999999999999999999999999999999999999999
Q ss_pred CcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHH
Q 037144 77 PNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCT 156 (502)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~a 156 (502)
|+||||++++++++++++|++.+.+|++...|..+|+++++|+++++|+++++|+|+.+...+.++|+||+|||+||++|
T Consensus 131 P~f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~a 210 (539)
T PLN02590 131 PSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVV 210 (539)
T ss_pred CCeeEeccCCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999865323346899999999999999
Q ss_pred HHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEE
Q 037144 157 LTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLF 236 (502)
Q Consensus 157 l~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~ 236 (502)
|.+||++..++.+..+.++.+||+|+++|+|+.|+|+++|+|.++++.||+|..++++||+++|+++|++++++|.+|++
T Consensus 211 l~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~ 290 (539)
T PLN02590 211 VLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFF 290 (539)
T ss_pred HHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEE
Confidence 99999988766666666889999999999999999999999999999999986556899999999999999999999999
Q ss_pred EEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeC
Q 037144 237 LCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKD 316 (502)
Q Consensus 237 Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~ 316 (502)
||+|+|||.+|++|||++|+++|++||+||||||||||+++++|++++++.|+++|||+++|+|||+++|++||++++|+
T Consensus 291 VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~ 370 (539)
T PLN02590 291 ICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKD 370 (539)
T ss_pred EEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q 037144 317 PSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD 396 (502)
Q Consensus 317 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~ 396 (502)
+..+.+++...+.|+...... ....+++.+|++++|||++++++|++|+.+|.+|+++++++++++|++|.+.|++.
T Consensus 371 ~~~l~~a~~~~~~YL~~~~~~---~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~ 447 (539)
T PLN02590 371 RYSLIDALKTNPEYLEFKVSK---KDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQD 447 (539)
T ss_pred HHHHHHHhhcCHHHhCCcccc---cccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 988888899999999643221 23457899999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEE
Q 037144 397 KRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRF 476 (502)
Q Consensus 397 ~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~ 476 (502)
|+|+++.+|.+++||||+.|... ..+..+++|++|.++|+++|.++++++.++|+.+||+
T Consensus 448 ~~fel~~~~~l~iVcFr~~~~~~--------------------~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~ 507 (539)
T PLN02590 448 PSFEVVTTRYFSLVCFRLAPVDG--------------------DEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRF 507 (539)
T ss_pred CCeEEecCCceEEEEEEecCCCC--------------------CHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEE
Confidence 99999999999999999987531 2234588899999999999999999999999999999
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 477 AAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 477 ~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
|++|+.|+++||+.+++.|.+.+.+
T Consensus 508 ~i~n~~T~~~dv~~~~~~i~~~a~~ 532 (539)
T PLN02590 508 AVGAPLTEEKHVTEAWQIIQKHASK 532 (539)
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998765
No 2
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=1.1e-89 Score=712.38 Aligned_cols=478 Identities=58% Similarity=1.038 Sum_probs=443.6
Q ss_pred CCccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccc
Q 037144 1 MDQAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYF 80 (502)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~ 80 (502)
|..||+++||++++++++++.+|++++.++||.|..+|+++++.++..+|++|.+++++++++.+.+.|+.++|+||+||
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~~p~~l~~~~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~ 86 (490)
T PLN02880 7 LRPMDAEQLRECGHRMVDFIADYYKSIENFPVLSQVQPGYLRELLPDSAPNQPETLDQVLDDVQAKILPGVTHWQSPNYF 86 (490)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCee
Confidence 34599999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHH
Q 037144 81 AYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAA 160 (502)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a 160 (502)
||++++++++++++|++.+.+|+++..|..+|.++++|+++++|+++++|+|+.+...+.++|++|+|||+||++||.+|
T Consensus 87 ~~~~~~~~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~A 166 (490)
T PLN02880 87 AYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAA 166 (490)
T ss_pred EeccCCCcHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998654334468999999999999999999
Q ss_pred HHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe
Q 037144 161 RDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCAT 240 (502)
Q Consensus 161 ~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t 240 (502)
|++..+..+..+.++.+||+|+.+|||+.|+|+++|+|.++++.||+|.+++++||+++|+++|++++++|.+|++||+|
T Consensus 167 R~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvat 246 (490)
T PLN02880 167 RDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCAT 246 (490)
T ss_pred HHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEe
Confidence 99887766666667889999999999999999999999999999999865578999999999999999999999999999
Q ss_pred cCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhh
Q 037144 241 VGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCL 320 (502)
Q Consensus 241 ~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l 320 (502)
+|||.+|++|||++|+++|++||+|+|||||||+++++++++++.++|+++|||+++|+|||+++|++||++++|++..+
T Consensus 247 aGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l 326 (490)
T PLN02880 247 VGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNAL 326 (490)
T ss_pred cCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998777
Q ss_pred hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144 321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFE 400 (502)
Q Consensus 321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~ 400 (502)
...+...+.|+...... ....+++.++++++|||++++++|++++.+|.+|+++++++++++++++.+.|++.|+|+
T Consensus 327 ~~~~~~~~~Yl~~~~~~---~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~e 403 (490)
T PLN02880 327 IQSLSTNPEFLKNKASQ---ANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFE 403 (490)
T ss_pred HHHHccCHHHhcCcccc---ccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 77888888998764322 224578889999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecC
Q 037144 401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGN 480 (502)
Q Consensus 401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~ 480 (502)
++.++.+++|||++.|... ..+..+++|.++.++|+++|.++++++.+.|+.++|+|++|
T Consensus 404 l~~~~~~~iv~Fr~~~~~~--------------------~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n 463 (490)
T PLN02880 404 VVTPRIFSLVCFRLVPPKN--------------------NEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGA 463 (490)
T ss_pred EecCCceEEEEEEEeCCCC--------------------ChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecC
Confidence 9999999999999987431 23455888999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHHHHh
Q 037144 481 SMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 481 ~~t~~~di~~~~~~l~~~~~~ 501 (502)
++|+++||+++++.|.+++++
T Consensus 464 ~~tt~~di~~~~~~i~~~~~~ 484 (490)
T PLN02880 464 PLTEERHVTAAWKVLQDEASK 484 (490)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999998765
No 3
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-88 Score=652.73 Aligned_cols=461 Identities=48% Similarity=0.879 Sum_probs=440.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccC
Q 037144 4 AYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYF 83 (502)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~ 83 (502)
|+.+|||+.|++|||+|.||+++++++||.|.++|++++.++|...|++|+++++|++|+.+.++||++||+||+|++|+
T Consensus 1 Md~~efR~~gk~mVD~IadY~e~ir~r~v~P~v~PGYl~~llP~~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~fhAyf 80 (511)
T KOG0628|consen 1 MDSEEFREEGKEMVDYIADYLENIRKRRVLPDVKPGYLRDLLPSKAPEKPESWEDILGDLEKIIMPGITHWQHPHFHAYF 80 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCcchhhhhCCCCCCCChhhHHHHHHHHHHHccCCCcccCCCceeeEc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCc--CCCCcEEEcCCchHHHHHHHHHHH
Q 037144 84 PATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLF--SGNGGGVIQGTTCEALLCTLTAAR 161 (502)
Q Consensus 84 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~--~~~~~g~~t~ggt~a~~~al~~a~ 161 (502)
+++.++|++++|++...++..++.|.++|+.++||..+++|+++++++|..|.. .+.|+|++++++|++++.++.+||
T Consensus 81 pa~~s~~siladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR 160 (511)
T KOG0628|consen 81 PAGNSYPSILADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAAR 160 (511)
T ss_pred cCccchHHHHHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998865 457899999999999999999999
Q ss_pred HHHHHHhCcc--------CCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 037144 162 DRVLKKIGRE--------NISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELI 233 (502)
Q Consensus 162 ~~~~~~~~~~--------~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~ 233 (502)
...+.+.+.. -..+.|+|+|+++|.|++|+|.+.|+ +++.+++|. ++.|+.+.|+++|++|.++|.+
T Consensus 161 ~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~V---klR~l~td~--n~~mr~~~L~~AIe~D~arGlI 235 (511)
T KOG0628|consen 161 TEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGV---KLRALPTDE--NFGMRGDTLRKAIEEDIARGLI 235 (511)
T ss_pred HHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcce---eEEEeeccc--CcCCCHHHHHHHHHHHHhCCCc
Confidence 9887764332 23789999999999999999999999 999999985 7999999999999999999999
Q ss_pred cEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEE
Q 037144 234 PLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLW 313 (502)
Q Consensus 234 p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~ 313 (502)
|++|++|.|||.++++|+|++|+.+|+++|+||||||||+|.++.||+++.++.|++.|||+.+++|||+.+-..|+.+|
T Consensus 236 Pf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lW 315 (511)
T KOG0628|consen 236 PFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLW 315 (511)
T ss_pred cEEEEEeecCccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q 037144 314 VKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLV 393 (502)
Q Consensus 314 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l 393 (502)
+|+...+.++++.++-||.+... +...|+..|++..+|||+++++|..+|.+|.+++++.++++.++++.|.+.+
T Consensus 316 vkd~~~~~~~~~vdp~yL~h~~~-----~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv 390 (511)
T KOG0628|consen 316 VKDGTKLSRAFNVDPLYLKHAYQ-----GSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLV 390 (511)
T ss_pred eecCceeeeeeecChHhhcchhh-----ccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 99998888899999999988753 3578999999999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEE
Q 037144 394 TSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYV 473 (502)
Q Consensus 394 ~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~ 473 (502)
.+.+.||+.++..+++||||..+. |+.|++|+++++.+|.+++.+..++|+.+
T Consensus 391 ~~d~~FE~~~~~~lgLvcFRlk~~---------------------------N~~ne~Ll~~in~~g~i~l~~~~l~gk~v 443 (511)
T KOG0628|consen 391 RADPRFEIVNKRILGLVCFRLKGD---------------------------NEINEALLNRLNSSGRIHLVPASLHGKFV 443 (511)
T ss_pred hcCCcceeecccccceeEEeecCC---------------------------cHHHHHHHHHHHhcCcEEEEEeeecceEE
Confidence 999999999999999999999875 78899999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 474 LRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 474 lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
||++++++.|+++||++.++.|.+.+..
T Consensus 444 lRf~V~s~~t~~~di~~a~~~I~~~a~~ 471 (511)
T KOG0628|consen 444 LRFAVCSPLTNESDIDEAWKIIFEAADE 471 (511)
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988765
No 4
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=4.3e-73 Score=588.74 Aligned_cols=465 Identities=21% Similarity=0.331 Sum_probs=384.5
Q ss_pred HHHHHHHHHHHHHHHHHHh--cCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCC
Q 037144 8 EFRRQGHMFVDFMAEYYKN--IDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPA 85 (502)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~ 85 (502)
++....+++.+.+++|+.+ ....|+.+.+.++.. ...+|++|.+.+++++++.+.++++.++|+||+||||+++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~~ 98 (522)
T TIGR03799 23 TLGRIEQKISQNLAGFLQEHIVAIEKPLSEIEKDFS----SAEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMTS 98 (522)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhccCCCchhhhhccc----ccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCeEEeccC
Confidence 4555555555555555554 333456555544432 4578999999999999999999999999999999999998
Q ss_pred C-CCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCC-CCcc----C-cCCCCcEEEcCCchHHHHHHHH
Q 037144 86 T-SSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDL-PKSF----L-FSGNGGGVIQGTTCEALLCTLT 158 (502)
Q Consensus 86 ~-~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~-~~~~----~-~~~~~~g~~t~ggt~a~~~al~ 158 (502)
+ +.....+++ +.+.+|+|...|..||+++++|+++++|++++++. ++.+ . ..+.++|+||+|||+||++||+
T Consensus 99 ~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~ 177 (522)
T TIGR03799 99 ALPYFMLPLSK-LMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALW 177 (522)
T ss_pred CCchHHHHHHH-HHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHH
Confidence 6 333334666 67789999999999999999999999999999963 2221 1 1123579999999999999999
Q ss_pred HHHHHHHHHhCc------c---------CCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHH
Q 037144 159 AARDRVLKKIGR------E---------NISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQ 223 (502)
Q Consensus 159 ~a~~~~~~~~~~------~---------~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~ 223 (502)
+||++.++..+. + +.++++||+|+.+|+|+.|+++++|+|..+++.||+|. +|+||+++|+++
T Consensus 178 ~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~--~g~~d~~~L~~~ 255 (522)
T TIGR03799 178 VARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDA--NNRIDVDALRDK 255 (522)
T ss_pred HHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCC--CCcCCHHHHHHH
Confidence 999987643211 1 23578999999999999999999999998999999985 579999999999
Q ss_pred HHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcC
Q 037144 224 INLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWL 303 (502)
Q Consensus 224 i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l 303 (502)
|+++.+++.+|++|++++|||.+|++|||++|+++|+++|+|+|||||||++.++++++++++.+++++||+++|+|||+
T Consensus 256 i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l 335 (522)
T TIGR03799 256 CAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQL 335 (522)
T ss_pred HHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcC
Confidence 99988889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHH
Q 037144 304 FTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHV 383 (502)
Q Consensus 304 ~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~ 383 (502)
++|++||++++|++..+ +.+...+.|+... +..++.++++++||++.++++|++++.+|.+|+++++++..
T Consensus 336 ~~P~g~G~llvr~~~~~-~~~~~~~~Yl~~~--------~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~ 406 (522)
T TIGR03799 336 YVPMGAGMVLFKDPALM-SAIEHHAEYILRK--------GSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSI 406 (522)
T ss_pred CcCcccEEEEEeCHHHH-HHhccCcchhcCC--------CCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999998654 4677778897532 22456788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE
Q 037144 384 GMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM 463 (502)
Q Consensus 384 ~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 463 (502)
+++++|.+.|++.|+|+++.+|.+++|||++.|..+..... .++.++. ....+..+++|++|.++++++|.+++
T Consensus 407 ~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~----~~~~~~~--~~~~~~~~~ln~~i~~~~~~~G~~~v 480 (522)
T TIGR03799 407 EKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALA----KADEEQR--EKINELLDRLTKFIQKRQREAGKSFV 480 (522)
T ss_pred HHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhccccc----ccchhhh--hhHHHHHHHHHHHHHHHHHhcCCEEE
Confidence 99999999999999999999999999999998754311000 0000000 01123468899999999999999999
Q ss_pred EeeeEC-------CEEEEEEEecCCCCcHHHHHHHHHH
Q 037144 464 THAIVG-------GIYVLRFAAGNSMTMESHVRAAWTV 494 (502)
Q Consensus 464 ~~~~~~-------g~~~lR~~~~~~~t~~~di~~~~~~ 494 (502)
+.+.+. +..+||++++|+.|+++||+.+++.
T Consensus 481 s~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 481 SRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred EEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 988765 4578999999999999999998864
No 5
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=1.2e-73 Score=573.89 Aligned_cols=370 Identities=38% Similarity=0.727 Sum_probs=331.2
Q ss_pred chhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHH
Q 037144 38 PGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVEL 117 (502)
Q Consensus 38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~l 117 (502)
|++|++.++..+|++|.++++|++++.+.+.++..+|+||+||+|+++++++++++++++++.+|+|...|..+|.++++
T Consensus 1 P~~l~~~~~~~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~ 80 (373)
T PF00282_consen 1 PGELRARLDEELPEEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLASALNQNGFTWEASPAATEI 80 (373)
T ss_dssp TTSSGGGCHCCHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHHHHH
T ss_pred ChhhhhcCccccccCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHhhhcccccccccccccccc
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC---CCCeEEEeCCCCchhHHHHHHH
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN---ISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~---~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
|+++++|+++++|+|..+...+.++|++|+|||+||++|+++||+++.++.+..+ .++++||+|+.+|||+.|+|++
T Consensus 81 E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~ 160 (373)
T PF00282_consen 81 EREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARI 160 (373)
T ss_dssp HHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHH
T ss_pred hHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcce
Confidence 9999999999999996654433468999999999999999999999876654444 4689999999999999999999
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144 195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 274 (502)
Q Consensus 195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~ 274 (502)
+|+ .++.||+++ +++||+++|+++|.++.++|..|++|++|+|||.+|++|||++|+++|++|++|+||||||||
T Consensus 161 lGl---g~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg 235 (373)
T PF00282_consen 161 LGL---GVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGG 235 (373)
T ss_dssp TTS---EEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGG
T ss_pred eee---EEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccc
Confidence 999 599999986 579999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144 275 SACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL 354 (502)
Q Consensus 275 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 354 (502)
..+++|.++++..+++++|||++|+|||+++|++||++++|++..+...+...+.|+...... .....++.++++++
T Consensus 236 ~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~---~~~~~~~~~~tl~~ 312 (373)
T PF00282_consen 236 SALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRE---SDESYDYGDYTLQG 312 (373)
T ss_dssp GGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SS---S-GGGCEEEGSSSS
T ss_pred cccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccc---cccccccccccccc
Confidence 999999999999999999999999999999999999999999998888888889999854422 33556788999999
Q ss_pred CCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEee
Q 037144 355 CRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT 415 (502)
Q Consensus 355 sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~ 415 (502)
||+++++++|++|+.+|.+|+++++++..+++++|++.|++.++|+++.+|.+++|||+++
T Consensus 313 SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~k 373 (373)
T PF00282_consen 313 SRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRYK 373 (373)
T ss_dssp SGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEES
T ss_pred cccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEeC
Confidence 9999999999999999999999999999999999999999999999999999999999984
No 6
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-72 Score=533.47 Aligned_cols=472 Identities=20% Similarity=0.323 Sum_probs=423.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC--CCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCC
Q 037144 7 QEFRRQGHMFVDFMAEYYKNIDK--YPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFP 84 (502)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~ 84 (502)
+..+....++++.+.+|...--+ ..|.+.+.|.+|+..+...+|+++++.++|+++.++.+.. .+...|||||+...
T Consensus 31 ~~te~fl~~v~~~ll~~v~~~~dr~~kv~~fhhP~~L~~l~nlel~~~~esl~qil~~cr~tl~y-~vKTgHprffNQl~ 109 (510)
T KOG0629|consen 31 EVTEPFLRAVVDILLDYVKKGFDRSQKVLDFHHPDELKELFNLELRDQPESLAQILEDCRDTLKY-SVKTGHPRFFNQLS 109 (510)
T ss_pred hhhHhhhHHHHHHHHHhhccCCcccceeecccChHHHHHHhCcccCCChhhHHHHHHHHHHHHHh-hhccCCCcchhhhc
Confidence 44577888999999999665443 4788999999999999999999999999999999987654 46678999999999
Q ss_pred CCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHH
Q 037144 85 ATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRV 164 (502)
Q Consensus 85 ~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~ 164 (502)
++..+.+..+++++++.|.|...|+..|.+.-+|.++...+.++.|++.. ++|+|++||+.||++|+.+||.+.
T Consensus 110 ~glD~~~Lag~wlT~t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~------~DgIf~pggsisn~Ya~~~Aryk~ 183 (510)
T KOG0629|consen 110 SGLDPIGLAGEWLTSTANTNMFTYEIAPVFVLMEEEVLAKMREIVGWEEG------GDGIFAPGGSISNMYAMNCARYKN 183 (510)
T ss_pred cCCCHHHHHHHHHHhccCCCCceEEecceEEeehHHHHHHHHHHhCCCCC------CCceecCCchhHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999875 379999999999999999999987
Q ss_pred HHH---hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec
Q 037144 165 LKK---IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV 241 (502)
Q Consensus 165 ~~~---~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~ 241 (502)
++. .|..+.|..++++|+++|||+.|+|.++|+|.++++.|++++ +|.|++++||+.|.++.++|..|++|.+|+
T Consensus 184 ~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e--~Gkm~~~dLe~kile~k~kg~~Pf~vnaTa 261 (510)
T KOG0629|consen 184 FPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDE--RGKMIPDDLEKKILEAKAKGGVPFFVNATA 261 (510)
T ss_pred CchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEecccc--cCccchHHHHHHHHHHHhcCCCCeEEEecC
Confidence 655 355566999999999999999999999999999999999986 679999999999999999999999999999
Q ss_pred CCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhh
Q 037144 242 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLL 321 (502)
Q Consensus 242 gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~ 321 (502)
|||+.|++|||+.|+++|++|++|+||||||||+.+.+..+|+++.|+++|||+++++||++++|..||.+++|....+.
T Consensus 262 GTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~ 341 (510)
T KOG0629|consen 262 GTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQ 341 (510)
T ss_pred CceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
++.+.++.|+++.... ..-.+|.++..+||+|+...+++|..|++-|..|+++.++++.++|+||.++|++.+++++
T Consensus 342 ~Cn~~~A~YLFq~dK~---YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~ 418 (510)
T KOG0629|consen 342 RCNQMSAIYLFQQDKF---YDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEM 418 (510)
T ss_pred hhcccchhhhhccCce---eecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhccccee
Confidence 8888999999876533 3456788999999999999999999999999999999999999999999999999999888
Q ss_pred ecC--CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-CEEEEEEEe
Q 037144 402 AFP--RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG-GIYVLRFAA 478 (502)
Q Consensus 402 ~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~ 478 (502)
+.. |+...|||++.|+.++.++.. .+....+..+...+.+++.++|-..+++.... ...++|+.+
T Consensus 419 l~~~~pe~~nv~fw~vp~~lR~~~~~------------~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~ 486 (510)
T KOG0629|consen 419 LFELEPEHVNVCFWYVPPSLRGWQEN------------PERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVI 486 (510)
T ss_pred hhcCCCceEEEeeccCchHhccCccc------------chhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheec
Confidence 754 777899999999876544321 12234456667788999999999888876554 346999999
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHhC
Q 037144 479 GNSMTMESHVRAAWTVVQEHLEAF 502 (502)
Q Consensus 479 ~~~~t~~~di~~~~~~l~~~~~~~ 502 (502)
.|+..+++|+|.+++.|.++.+.+
T Consensus 487 sn~a~~~ad~dflldEIerlgq~l 510 (510)
T KOG0629|consen 487 SNPALTEADLDFLLDEIERLGQDL 510 (510)
T ss_pred ccchhhhhhHHHHHHHHHHhccCC
Confidence 999889999999999999987653
No 7
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=3.7e-67 Score=547.50 Aligned_cols=457 Identities=18% Similarity=0.265 Sum_probs=380.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCC-ccccc
Q 037144 5 YAQEFRRQGHMFVDFMAEYYKNIDKYPV-RSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSP-NYFAY 82 (502)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p-~~~~~ 82 (502)
+.+.|+++..++++.+.++.++. .|- .+.++|++++. ..+.+...+++++++++.+.+.++..+|+|| ||+||
T Consensus 15 n~~~~~~~~~~~~~~~~~~r~~~--~p~d~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~l~~~sv~~~~P~ry~gh 89 (608)
T TIGR03811 15 NGQLYKDLLNKLVDEHLGWRQNY--MPQDKPVISPQERTS---KSFTKTVNNMKDVLDELSSRLRTESVPWHSAGRYWGH 89 (608)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhc--CCCCCCCCCHHHhcc---cccccCccCHHHHHHHHHHHHhcCCCCCCCccceEEE
Confidence 56789999999999999999883 221 14567776655 3445555689999999999999999999999 99999
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHH
Q 037144 83 FPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARD 162 (502)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~ 162 (502)
+++++.+|+++++++...+|+|...|+.||+++.+|+++.+|+++++|+++. +|+||+|||+||++||++||+
T Consensus 90 m~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~-------~G~~TsGGT~ANl~aL~~AR~ 162 (608)
T TIGR03811 90 MNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNG-------WGHIVADGSLANLEGLWYARN 162 (608)
T ss_pred CcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCC-------CeEEeCChHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999874 689999999999999999998
Q ss_pred HHH-----HHhC---------c--------------------------------cCCCCe-EEEeCCCCchhHHHHHHHc
Q 037144 163 RVL-----KKIG---------R--------------------------------ENISKL-VVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 163 ~~~-----~~~~---------~--------------------------------~~~~~~-~v~~s~~~H~s~~~aa~~~ 195 (502)
... +... + ....+. ++++|+.+||||.|+|.++
T Consensus 163 ~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~il 242 (608)
T TIGR03811 163 IKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADII 242 (608)
T ss_pred hhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHc
Confidence 641 1100 0 001122 7899999999999999999
Q ss_pred CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHH---HHhCC--EEEeec
Q 037144 196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVA---KQFGI--WVHVDA 270 (502)
Q Consensus 196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~---~~~g~--~lhVDa 270 (502)
|+|.++++.||+|. +++||+++|+++|+++.++|..|++||+|+|||.+|++|||++|+++| +++|+ |+||||
T Consensus 243 GlG~~~vv~VpvD~--~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDA 320 (608)
T TIGR03811 243 GIGLDQVIPVPVDS--NYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDA 320 (608)
T ss_pred CCCcccEEEeecCC--CCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeec
Confidence 99999999999985 679999999999999999999999999999999999999999999999 67898 699999
Q ss_pred cccccc--ccC------------------------------ccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCch
Q 037144 271 AYAGSA--CIC------------------------------PEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPS 318 (502)
Q Consensus 271 A~g~~~--~~~------------------------------~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~ 318 (502)
||||++ +++ +++++.++++++|||||+|+|||+++|++||++++|++.
T Consensus 321 AyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~ 400 (608)
T TIGR03811 321 AYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIR 400 (608)
T ss_pred cccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCHH
Confidence 999975 222 355677889999999999999999999999999999996
Q ss_pred hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144 319 CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTS 395 (502)
Q Consensus 319 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~ 395 (502)
+.+.++..++|+.....+ .....+.+++++||+ ++++++|++++.+ |.+||++++++++++|++|.+.|++
T Consensus 401 -~~~~~~~~a~Yl~~~~~~-----~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~ 474 (608)
T TIGR03811 401 -MRDVISYFATYVFEKGAD-----IPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNN 474 (608)
T ss_pred -HHHHHhcCcchhcccccc-----CcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 566788889999753221 112456678899986 6799999999998 9999999999999999999999988
Q ss_pred ------CCCeEE--ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-h-----cCcE
Q 037144 396 ------DKRFEV--AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-V-----SGKV 461 (502)
Q Consensus 396 ------~~~~~l--~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~-----~g~~ 461 (502)
.+.|++ +.+|++++|||++.+.+. .+.+..|++|+++++++. . +..+
T Consensus 475 ~~~~~~~~~~el~~~~~pdlniV~Fr~~~~g~-------------------~~l~~~n~ln~~i~~~~~~~~g~~~~~~~ 535 (608)
T TIGR03811 475 LEFKVGDKEIEVHPLTKPDFNMVDYVFNEKGN-------------------DDLVKMNKLNHAFYDYASYVKGSIYNNEF 535 (608)
T ss_pred cccccCCCCeeEEecCCCCcceEEEEEecCCC-------------------ccHHHHHHHHHHHHHhhccccCCCCCcce
Confidence 466787 678999999999987642 133567899999999876 2 2223
Q ss_pred EEEeeeE--------------------------CCEEEEEEEecCCC-CcHHHHHHHHHHHHHHHH
Q 037144 462 FMTHAIV--------------------------GGIYVLRFAAGNSM-TMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 462 ~~~~~~~--------------------------~g~~~lR~~~~~~~-t~~~di~~~~~~l~~~~~ 500 (502)
+++.+.+ ....+||.++|+|. ++.+.++.+++.|+++..
T Consensus 536 ~~s~t~~~~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~ 601 (608)
T TIGR03811 536 ITSHTDFAIPDYGDSPFAFVNSLGFSDEEWQRAGKVTILRASVMTPYMNDKENFDEYAPKIKAAMQ 601 (608)
T ss_pred EeeecccccchhhhhHHHHHHHcCCChhhhccCCceEEEEEEecCcccCChhhHHHHHHHHHHHHH
Confidence 4555432 13468999999986 444778888888887654
No 8
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=8.6e-59 Score=473.45 Aligned_cols=437 Identities=24% Similarity=0.313 Sum_probs=360.3
Q ss_pred HHHHHHHhcCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHh-hcCCCCCCCCCcccccCCCCCCHHHHHHHHH
Q 037144 19 FMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEH-IVPGITHWQSPNYFAYFPATSSVAGIVGEML 97 (502)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l 97 (502)
.+.++......+...+..+|-+-.......+|+.|.+.++++.++... +.+...++.||+++.|..+.+.++..+.+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~ 82 (460)
T COG0076 3 GLIDKDMLNSKRYSGDSLSPLFGALSDSRMAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELL 82 (460)
T ss_pred hHHHHHHhhccCCCccccccchhhhhhhccCCccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHH
Confidence 445555555555555666666666666778999999999999999998 4455556679999999999999999999999
Q ss_pred HhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCcc-C--CC
Q 037144 98 SSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRE-N--IS 174 (502)
Q Consensus 98 ~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~-~--~~ 174 (502)
...+|+|...|..+|+++++|+++++|+++++|++... .|+||+|||+||++|++++|+++.+..+.. + .+
T Consensus 83 ~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~------~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~ 156 (460)
T COG0076 83 VSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEA------SGTFTSGGTEANLLALLAARERWRKRALAESGKPGG 156 (460)
T ss_pred HHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCC------ceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCC
Confidence 99999999999999999999999999999999998654 799999999999999999999987543221 1 13
Q ss_pred CeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhH
Q 037144 175 KLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKP 254 (502)
Q Consensus 175 ~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~e 254 (502)
.++|++|..+|+|+.|+++++|+ .++.+|+++. +++||+++|+++|++++..| +||+++|||.+|.+|||++
T Consensus 157 ~P~ii~s~~aH~s~~Kaa~~lG~---~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~iDdi~~ 228 (460)
T COG0076 157 KPNIVCSETAHFSFEKAARYLGL---GLRRVPTVPT-DYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSIDDIEE 228 (460)
T ss_pred CCeEEecCcchhHHHHHHHHhCC---CceeEEeccC-ccccCHHHHHHHHHhhccCc----eEEEEecCCCCCccCCHHH
Confidence 56899999999999999999999 7777777754 67999999999999998765 7999999999999999999
Q ss_pred HHHHHHHhCCEEEeecccccccccCccchhh-hcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccC
Q 037144 255 LCDVAKQFGIWVHVDAAYAGSACICPEFRHF-IDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKN 333 (502)
Q Consensus 255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~-~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~ 333 (502)
|+++|++|++|+|||||+||+.+++.+.+.. ..+++++|||++|+|||+++|++||++++||+..+.+.......|+..
T Consensus 229 ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~ 308 (460)
T COG0076 229 LADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPG 308 (460)
T ss_pred HHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCC
Confidence 9999999999999999999999988887777 578999999999999999999999999999997777776666677754
Q ss_pred ccCCCCCcccccCCCcccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEE
Q 037144 334 EATDQEPKEQEVGYKDWQITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCF 412 (502)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f 412 (502)
. ....+++.++|.. .++++|+.++.+|.+||+++++++.+++++|.+.|++.+.|+++.+|.+++|||
T Consensus 309 ~-----------~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~f 377 (460)
T COG0076 309 G-----------GIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAF 377 (460)
T ss_pred C-----------CcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEE
Confidence 2 2334677788876 688999999999999999999999999999999999998899999999999999
Q ss_pred EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHH
Q 037144 413 RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAW 492 (502)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~ 492 (502)
++++..- .-....+..+..+-.+......+|..++..+.+.++.++++.+.+..++.++ +.+.
T Consensus 378 r~~~~~~----------------~~~~~~~~~~~~gw~v~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 440 (460)
T COG0076 378 RLKDDED----------------TLADLSERLDRRGWQVPAQLLPKGLAIVFGTHVTGRQGLKFIVANLLITDRE-ESLL 440 (460)
T ss_pred EcCCccc----------------chhchHHHHHhcCceeecccCCccceeeeeeEEeeeeeehhhcchhhhhhhh-HHHH
Confidence 9954210 0000112223334444455555676677777777888899888887766655 5555
Q ss_pred HHHHH
Q 037144 493 TVVQE 497 (502)
Q Consensus 493 ~~l~~ 497 (502)
..+..
T Consensus 441 ~~~~~ 445 (460)
T COG0076 441 ALIEE 445 (460)
T ss_pred HHhhh
Confidence 55543
No 9
>PLN02263 serine decarboxylase
Probab=100.00 E-value=8.1e-57 Score=454.24 Aligned_cols=358 Identities=18% Similarity=0.233 Sum_probs=303.3
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCH-HHHHHHHHHhhcCCCCcccccCh---hhHHHHHHHHHHHHHhcCC
Q 037144 56 VETILQDVQEHIVPGITHWQSPNYFAYFPATSSV-AGIVGEMLSSGFNVVGLDWISSP---AAVELENIVMDWLGQMLDL 131 (502)
Q Consensus 56 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~~p---~~~~le~~~~~~l~~l~g~ 131 (502)
++++|+++.+.+.++..+ |||| |...+. ++.+++++...+|+.+..|..+| .+.++|+++++|+++++|+
T Consensus 75 ~~~~l~~~~~~~~~~~~~-----~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~ 148 (470)
T PLN02263 75 MASVLARYRKTLVERTKH-----HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEI 148 (470)
T ss_pred HHHHHHHHHHHHHhcccc-----eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCC
Confidence 589999999999887543 8999 555666 88999999999999999999988 7899999999999999999
Q ss_pred CCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCC
Q 037144 132 PKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSS 211 (502)
Q Consensus 132 ~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~ 211 (502)
|++. .+|++|+|||+||++|+++||+.+ ++.++|+|+.+|||+.|+++++|+ +++.||+++
T Consensus 149 p~~~-----~~G~vtsGGTEaNL~Al~aARe~~---------~~~vvy~S~~aH~Sv~KAa~llgi---~~~~Vp~d~-- 209 (470)
T PLN02263 149 EKNE-----YWGYITNCGTEGNLHGILVGREVF---------PDGILYASRESHYSVFKAARMYRM---ECVKVDTLV-- 209 (470)
T ss_pred CCCC-----CeEEEeCcHHHHHHHHHHHHHhhc---------CCcEEEEcCCccHHHHHHHHhcCC---cceEeccCC--
Confidence 8631 268999999999999999999963 456899999999999999999999 999999975
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCC-----EEEeecccccccccCccchhhh
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI-----WVHVDAAYAGSACICPEFRHFI 286 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~-----~lhVDaA~g~~~~~~~~~~~~~ 286 (502)
+|+||+++|+++|.+++ .+|++|++|+|||++|++|||++|+++|+++|+ |+||||||||+++++.+....+
T Consensus 210 ~g~mD~~aL~~aI~~d~---~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~ 286 (470)
T PLN02263 210 SGEIDCADFKAKLLANK---DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKV 286 (470)
T ss_pred CCcCcHHHHHHHHHhCC---CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccccc
Confidence 67999999999997754 469999999999999999999999999999997 9999999999988654444446
Q ss_pred cCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCC-CchHHHH
Q 037144 287 DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRF-RSLKLWV 365 (502)
Q Consensus 287 ~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~ 365 (502)
.+.+.+|||++|+|||+++|++||++++|++. .+.+...+.|+... +.++++||++ .++++|+
T Consensus 287 df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~--~~~~~~~~~Yl~~~--------------d~ti~gSR~g~~al~lW~ 350 (470)
T PLN02263 287 TFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH--INVLSSNVEYLASR--------------DATIMGSRNGHAPIFLWY 350 (470)
T ss_pred CCCcCccEEEECCccccCCCcCEEEEEEehhh--HhhhccChHhhCCC--------------CCCcCCCCCcHHHHHHHH
Confidence 66677999999999999999999999999653 35677888898653 2478899997 4899999
Q ss_pred HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhH
Q 037144 366 VIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTN 445 (502)
Q Consensus 366 ~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (502)
+|+.+|.+|++++++++.++|+++.+.|++. +++++.+|.+++|+|+.+..
T Consensus 351 ~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f~~p~~---------------------------- 401 (470)
T PLN02263 351 TLNRKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVFERPKD---------------------------- 401 (470)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEEecCch----------------------------
Confidence 9999999999999999999999999999998 78877788899999974321
Q ss_pred HHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 446 EFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 446 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
.. ..+|.. ++. -...+|++++ ++.+.+.+|++++.|++..+
T Consensus 402 ----~~----~~~gW~-L~~----~~~~~Hivvm-phv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 402 ----EE----FVRRWQ-LAC----QGNIAHVVVM-PSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred ----HH----hhcceE-Ecc----CCCcEEEEEc-CCCCHHHHHHHHHHHHHHHh
Confidence 01 123542 222 1236999998 55667899999999987654
No 10
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=5.9e-56 Score=452.06 Aligned_cols=398 Identities=16% Similarity=0.207 Sum_probs=328.4
Q ss_pred CCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHH
Q 037144 47 ESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLG 126 (502)
Q Consensus 47 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~ 126 (502)
..+|++|.+.+++++++...+.. .+..||+|++|+.+++.+. +.+++...+|.+...|..+|..+++|+++++|++
T Consensus 15 ~~~p~~~~~~~~~~~~~~~~iyl--d~~a~~~~~~~~tt~~~p~--~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la 90 (431)
T TIGR01788 15 YRMPEEEMPPDAAYQLIHDELSL--DGNPRLNLATFVTTWMEPE--ARKLMDETINKNMIDKDEYPQTAEIENRCVNMLA 90 (431)
T ss_pred ccCCCCCCCHHHHHHHHHHHhhh--cCCcceeeeeeeCCCCCHH--HHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHH
Confidence 47899999999999999987642 4556899999997655444 6888888898887778888888899999999999
Q ss_pred HhcCCC-C-ccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC--CCCeEEEeCCCCchhHHHHHHHcCCCCCCE
Q 037144 127 QMLDLP-K-SFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN--ISKLVVYSSDQTHCAFQKAAQIVGIDRKNI 202 (502)
Q Consensus 127 ~l~g~~-~-~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~--~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v 202 (502)
+++|++ . .. ..|++|+||||||++|+.++|+++..+....+ ..+.+||+|+.+|+||.|+++++|+ ++
T Consensus 91 ~llg~~~~~~~-----~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~---~v 162 (431)
T TIGR01788 91 DLWHAPAKDAE-----AVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDV---EL 162 (431)
T ss_pred HHhCCCCCCCC-----CeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCc---ee
Confidence 999998 2 11 26788999999999999999865433211111 1356899999999999999999999 99
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh------CCEEEeeccccccc
Q 037144 203 RAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF------GIWVHVDAAYAGSA 276 (502)
Q Consensus 203 ~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~------g~~lhVDaA~g~~~ 276 (502)
+.||+++ +++.||+++|+++|+++ +++|++++++|.+|++|||++|+++|+++ |+|+||||||+|++
T Consensus 163 ~~i~~d~-~~~~vd~~~L~~~i~~~------t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~ 235 (431)
T TIGR01788 163 REVPMDP-GRYVIDPEQVVEAVDEN------TIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFI 235 (431)
T ss_pred EEEecCC-CceeeCHHHHHHHHhhC------CeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHH
Confidence 9999986 23689999999999865 46999999999999999999999999999 99999999999987
Q ss_pred cc--CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144 277 CI--CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL 354 (502)
Q Consensus 277 ~~--~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 354 (502)
++ +++.+..+. ++++||+++|+|||+++|+|||++++|++..+...+...+.|+.... .++++++
T Consensus 236 ~p~~~~~~~~~~~-~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~------------~~~t~~~ 302 (431)
T TIGR01788 236 APFVYPDLEWDFR-LPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDE------------PTFTLNF 302 (431)
T ss_pred HHHhCCCchhhcC-CCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCC------------CCcceec
Confidence 64 344444343 67999999999999999999999999988655556666777885421 2357889
Q ss_pred CCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144 355 CRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNGTY 432 (502)
Q Consensus 355 sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 432 (502)
||++ +++++|+.++.+|.+|++++++++.+++++|.++|++.|+|+++.+ +.+++|||++.+..-
T Consensus 303 sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~------------- 369 (431)
T TIGR01788 303 SRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDAD------------- 369 (431)
T ss_pred CchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCC-------------
Confidence 9986 7789999999999999999999999999999999999999999987 789999999976310
Q ss_pred ccccccchhHhhHHHHHHHHHHHHhcCcEE---EEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 433 DQYRQFSEEERTNEFNRELLESINVSGKVF---MTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.+..+.++.++|.++|+++ .+++.++|..++|++++ ++.+.+.++++++.|.++...
T Consensus 370 -----------~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~-~~~~~~~~~~~~~~~~~~~~~ 429 (431)
T TIGR01788 370 -----------PGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVR-EGFSRDLAELLIEDIEAALAY 429 (431)
T ss_pred -----------CCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEec-CCCCHHHHHHHHHHHHHHHHh
Confidence 0112567888999999864 45556788999999986 556677999999999988764
No 11
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=2e-49 Score=395.98 Aligned_cols=357 Identities=19% Similarity=0.237 Sum_probs=285.2
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCccccc---ChhhHHHHHHHHHHHHHhcCCC
Q 037144 56 VETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWIS---SPAAVELENIVMDWLGQMLDLP 132 (502)
Q Consensus 56 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~---~p~~~~le~~~~~~l~~l~g~~ 132 (502)
..++++.+.+.+.. .+..|+||..+...-++.+..++....|+.+..+.. +..+.++|+++++|+++++|++
T Consensus 8 ~~~~~~~~~~~~~~-----~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~ 82 (374)
T PLN03032 8 MADILASYDKLLAE-----KSSVHFGYPYNLDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELE 82 (374)
T ss_pred HHHHHHHHHHHHHH-----hhhhccCCCchhccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCC
Confidence 45677777766543 356789998776666667777776655544444333 3468999999999999999997
Q ss_pred CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCC
Q 037144 133 KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSS 212 (502)
Q Consensus 133 ~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~ 212 (502)
++. .+|+||+||||||++|++++|+.. ++.+|++|+.+|+|+.|+++++|+ .++.||++. +
T Consensus 83 ~~~-----~~G~fTsGGTEaNl~al~~ar~~~---------~~~~vi~s~~~H~Sv~kaa~~lg~---~~~~V~~d~--~ 143 (374)
T PLN03032 83 KDE-----YWGYITTCGTEGNLHGILVGREVF---------PDGILYASRESHYSVFKAARMYRM---EAVKVPTLP--S 143 (374)
T ss_pred Ccc-----CCEEEeCchHHHHHHHHHHHHHhC---------CCcEEEeCCCceeHHHHHHHHcCC---CCeEeeeCC--C
Confidence 542 158999999999999999998752 345899999999999999999999 789999986 5
Q ss_pred cccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC-----CEEEeecccccccccCccchhhhc
Q 037144 213 YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG-----IWVHVDAAYAGSACICPEFRHFID 287 (502)
Q Consensus 213 ~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g-----~~lhVDaA~g~~~~~~~~~~~~~~ 287 (502)
|+||+++|+++|++++ ..|++|++++|||.+|++|||++|+++|++|| +|+|||||+|++.+++......++
T Consensus 144 g~id~~~L~~~i~~~~---~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~ 220 (374)
T PLN03032 144 GEIDYDDLERALAKNR---DKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVT 220 (374)
T ss_pred CcCcHHHHHHHHHHcC---CCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccC
Confidence 7999999999998653 35889999999999999999999999999996 599999999998876533333333
Q ss_pred CCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHH
Q 037144 288 GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVV 366 (502)
Q Consensus 288 ~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~ 366 (502)
....+||+++|+|||+++|++||++++|++. + ..+...++|+... ++++++||+ +.++++|++
T Consensus 221 ~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~-~-~~~~~~~~Yl~~~--------------d~ti~gSR~g~~~l~~w~~ 284 (374)
T PLN03032 221 FRKPIGSVSVSGHKFLGCPMPCGVALTRKKH-V-KALSQNVEYLNSR--------------DATIMGSRNGHAPLYLWYT 284 (374)
T ss_pred CCcCCcEEEECcccccCCCcCeEEEEEEchh-h-HhhccCCcccCCC--------------CCcccCCCchHHHHHHHHH
Confidence 3457999999999999999999999999753 2 3566677887542 368999997 678999999
Q ss_pred HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHH
Q 037144 367 IRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNE 446 (502)
Q Consensus 367 l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (502)
|+.+|.+|++++++++.+++++|.+.|++. +++++.+|.+++|+|+.+.. +
T Consensus 285 l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~V~f~~~~~---------------------------~- 335 (374)
T PLN03032 285 LRRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSSTVVFERPMD---------------------------E- 335 (374)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceEEEEcCCCc---------------------------H-
Confidence 999999999999999999999999999997 78988888899999976531 1
Q ss_pred HHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 447 FNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 447 ~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
.+. +|. .++.. +.++|++++ ++.+++.||++++.|++.
T Consensus 336 ---~~~-----~~w-~l~~~----~~~~hi~vm-~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 336 ---AFI-----KKW-QLACE----GDIAHVVVM-PNVTVEKLDEFVEELVEV 373 (374)
T ss_pred ---hHh-----hee-eeccc----CCEEEEEEC-CCCCHHHHHHHHHHHhcc
Confidence 111 243 22321 138999998 556678999999988763
No 12
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=5.4e-48 Score=388.74 Aligned_cols=356 Identities=19% Similarity=0.265 Sum_probs=284.3
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCH-HHHHHHHHHhhcCCCCcccccCh----hhHHHHHHHHHHHHHhcC
Q 037144 56 VETILQDVQEHIVPGITHWQSPNYFAYFPATSSV-AGIVGEMLSSGFNVVGLDWISSP----AAVELENIVMDWLGQMLD 130 (502)
Q Consensus 56 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~~p----~~~~le~~~~~~l~~l~g 130 (502)
..+.|+.+...+. +||+++.+++..... ++.+.+++....|+.+. +...+ .+.++|+++++|+++++|
T Consensus 7 ~~~~~~~~~~~~~------~~~~~~~g~p~~~~~~~~~~~~~~~~~~~n~gn-p~~~~~~g~~~~~~e~~~~~~~a~l~g 79 (380)
T PRK02769 7 DQKEIEDFWLYLR------HNQYFNVGYPEAADFDYSALKRFFSFSINNCGD-PYSKSNYPLNSFDFERDVMNFFAELFK 79 (380)
T ss_pred HHHHHHHHHHHHH------HhhhcccCCCchhhcCHHHHHHHHHhhhccCCC-ccccCCCCCChHHHHHHHHHHHHHHhC
Confidence 3556676666543 367766666555544 68888888887776443 33333 478999999999999999
Q ss_pred CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCC
Q 037144 131 LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKS 210 (502)
Q Consensus 131 ~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~ 210 (502)
++... ..|+||+||||||+.|++++|++. ++.+|++|+.+|+|+.|+++++|+ ..+.||+++
T Consensus 80 ~~~~~-----~~G~~TsGgTean~~a~~~ar~~~---------~~~~ii~s~~~H~Sv~ka~~~lg~---~~~~V~~~~- 141 (380)
T PRK02769 80 IPFNE-----SWGYITNGGTEGNLYGCYLARELF---------PDGTLYYSKDTHYSVSKIARLLRI---KSRVITSLP- 141 (380)
T ss_pred CCCCC-----CCEEEecChHHHHHHHHHHHHHhC---------CCcEEEeCCCceehHHHHHHHcCC---CCceeccCC-
Confidence 97542 258999999999999999998752 567899999999999999999999 788899875
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC---CEEEeecccccccccCccchhhhc
Q 037144 211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG---IWVHVDAAYAGSACICPEFRHFID 287 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g---~~lhVDaA~g~~~~~~~~~~~~~~ 287 (502)
+|+||+++|+++|+++ +.+|.+|++++|||.+|.+||+++|+++|++|| +|+|||||+|++.+++.+....++
T Consensus 142 -~g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d 217 (380)
T PRK02769 142 -NGEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFS 217 (380)
T ss_pred -CCcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCC
Confidence 5799999999999875 567889999999999999999999999999998 699999999998887654444455
Q ss_pred CCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHH
Q 037144 288 GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVV 366 (502)
Q Consensus 288 ~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~ 366 (502)
..+++||+++|+|||+++|+|||++++|++.. . .+.....|+.. .+.++++||+ +.++++|++
T Consensus 218 ~~~~vDsis~s~HK~~~~P~g~G~l~~r~~~~-~-~~~~~~~yl~~--------------~d~t~~GSR~g~~~l~lw~a 281 (380)
T PRK02769 218 FADGIDSIAISGHKFIGSPMPCGIVLAKKKYV-E-RISVDVDYIGS--------------RDQTISGSRNGHTALLLWAA 281 (380)
T ss_pred ccCCCCEEEECCcccCCCCCCcEEEEEehhhh-h-hcccCccccCC--------------CCCCccCCCCcHHHHHHHHH
Confidence 44589999999999999999999999997542 2 34445566642 2357889997 578999999
Q ss_pred HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHH
Q 037144 367 IRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNE 446 (502)
Q Consensus 367 l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (502)
++.+|.+|++++++++.++++++.++|++. |++++.+|.+++|+|+.+..
T Consensus 282 L~~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~v~f~~~~~----------------------------- 331 (380)
T PRK02769 282 IRSLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSITVVFPCPSE----------------------------- 331 (380)
T ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCceEEEEcCCCH-----------------------------
Confidence 999999999999999999999999999886 89999999999999965321
Q ss_pred HHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 447 FNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 447 ~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
.+. +|. .++.. +.++|++++ ++.+++.||.+++.|.+...
T Consensus 332 ---~~~-----~~w-~l~~~----~~~~hi~~~-~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 332 ---RIW-----KKW-HLATS----GNQAHIITM-PHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred ---HHH-----hCe-eEccc----CCEEEEEEC-CCCCHHHHHHHHHHHHHHHh
Confidence 121 243 23322 238999998 55667799999999887643
No 13
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=6.6e-44 Score=359.34 Aligned_cols=340 Identities=36% Similarity=0.602 Sum_probs=288.4
Q ss_pred ccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCC-CccCcCCCCcEEEcCCchHHHHHHH
Q 037144 79 YFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLP-KSFLFSGNGGGVIQGTTCEALLCTL 157 (502)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al 157 (502)
|++++++++.+++.+++++...+|++...|..+|...++|+++++|+++++|++ .. ..++||+|||+||++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~------~~~~~t~ggt~a~~~al 74 (345)
T cd06450 1 FLAGFVTTMDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSED------ADGVFTSGGSESNLLAL 74 (345)
T ss_pred CcccccCCCcHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCC------CCEEEeCChhHHHHHHH
Confidence 688888889999999999999999998889999999999999999999999997 32 26899999999999999
Q ss_pred HHHHHHHHHHhCcc---CCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 037144 158 TAARDRVLKKIGRE---NISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIP 234 (502)
Q Consensus 158 ~~a~~~~~~~~~~~---~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p 234 (502)
.+++.++.++.... ..++.+|+++..+|+++.++++.+|. +++.+|+++ ++.+|+++|+++|++..+++.++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~ 149 (345)
T cd06450 75 LAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDV---KVRLVPVDE--DGRMDPEALEAAIDEDKAEGLNP 149 (345)
T ss_pred HHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhc---CeEEeeeCC--CCCcCHHHHHHHHHHHHHCCCCc
Confidence 99987543321111 11356899999999999999999999 999999976 35999999999998877777778
Q ss_pred EEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEe
Q 037144 235 LFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWV 314 (502)
Q Consensus 235 ~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~ 314 (502)
.+|+++.++|++|.++|+++|+++|+++|+|+|+|+||+.+.++.+.......++.++|++++++|||+++|+++|++++
T Consensus 150 ~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~ 229 (345)
T cd06450 150 IMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLV 229 (345)
T ss_pred EEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHH
Confidence 88999999999999999999999999999999999999988876654444344556899999999999999999998764
Q ss_pred eCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh
Q 037144 315 KDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT 394 (502)
Q Consensus 315 r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~ 394 (502)
+ ++++|.+++.++.+++++++++..++++++.+.|+
T Consensus 230 ~--------------------------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~ 265 (345)
T cd06450 230 R--------------------------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIR 265 (345)
T ss_pred H--------------------------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3 35678899999999999999999999999999999
Q ss_pred cCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEE
Q 037144 395 SDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVL 474 (502)
Q Consensus 395 ~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~l 474 (502)
++++++++.+++.++++|++.+.. ..+..+.++.++|.++|.+++++..+.+..++
T Consensus 266 ~~~~~~~~~~~~~~iv~f~~~~~~------------------------~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~l 321 (345)
T cd06450 266 ADPGFELLGEPNLSLVCFRLKPSV------------------------KLDELNYDLSDRLNERGGWHVPATTLGGPNVL 321 (345)
T ss_pred cCCCeEEecCCceeEEEEEECCcc------------------------hhhHHHHHHHHHHHhcCCEEEEeeEECCeEEE
Confidence 999999987788999999986520 00122457888888888777777666677899
Q ss_pred EEEecCCCCcHHHHHHHHHHHHH
Q 037144 475 RFAAGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 475 R~~~~~~~t~~~di~~~~~~l~~ 497 (502)
|+++++++|+++||++++++|++
T Consensus 322 Ris~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 322 RFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred EEEecCCCCCHHHHHHHHHHHHh
Confidence 99998887888899999999876
No 14
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=4.7e-35 Score=297.86 Aligned_cols=367 Identities=21% Similarity=0.274 Sum_probs=270.0
Q ss_pred CCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCC
Q 037144 54 ESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPK 133 (502)
Q Consensus 54 ~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~ 133 (502)
.+.+++|+.+++.-.++... . ++|+...+. ..|.++ +.+...+..+.......+...+++.++.+++++++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~-~~~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~ 76 (371)
T PRK13520 2 LSEEEILEELEEYRSEDLKY-E--RILSSMCTE-PHPIAR-KAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPD 76 (371)
T ss_pred CCHHHHHHHHHHHHhcCCCH-H--HeeeeeecC-chHHHH-HHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC
Confidence 46789999999877665433 2 578876543 334433 444444433322222235677888999999999999976
Q ss_pred ccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCc
Q 037144 134 SFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSY 213 (502)
Q Consensus 134 ~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~ 213 (502)
. .+++++|||++|..++.+++.... .+++.|++++.+|+++.++++..|+ +++.||+++ ++
T Consensus 77 ~-------~~~~~~ggt~a~~~a~~~~~~~~~-------~~~~~vl~~~~~h~s~~~~~~~~g~---~~~~v~~~~--~~ 137 (371)
T PRK13520 77 A-------YGYITSGGTEANIQAVRAARNLAK-------AEKPNIVVPESAHFSFDKAADMLGV---ELRRAPLDD--DY 137 (371)
T ss_pred C-------CeEEecCcHHHHHHHHHHHHhhcc-------CCCceEEecCcchHHHHHHHHHcCc---eEEEecCCC--CC
Confidence 4 578999999999998888765310 1357889999999999999999999 999999875 46
Q ss_pred ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhc-CCCCC
Q 037144 214 GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID-GVECV 292 (502)
Q Consensus 214 ~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~-~~~~a 292 (502)
.+|+++|+++|++++ .+|+++.++|++|.++|+++|+++|+++|+++|||+||+++.+........+. ...++
T Consensus 138 ~~d~~~l~~~i~~~~------~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~v 211 (371)
T PRK13520 138 RVDVKAVEDLIDDNT------IGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGV 211 (371)
T ss_pred cCCHHHHHHHHhhCC------EEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCC
Confidence 899999999997643 36777888999999999999999999999999999999887643211100011 23479
Q ss_pred CeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhc
Q 037144 293 DSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFG 371 (502)
Q Consensus 293 Dsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g 371 (502)
|++++++|||+++|.++|+++++++..+. .+....+|+.... .+...+++. ...+++|.+++.++
T Consensus 212 d~~~~s~~K~~~a~~~~G~~~~~~~~~~~-~l~~~~~~~~~~~-------------~~~~~gt~~~~~~~~~~~al~~l~ 277 (371)
T PRK13520 212 DSITIDPHKMGLAPIPAGGILFRDESYLD-ALAVDTPYLTSKK-------------QATLTGTRSGAGVAATYAVMKYLG 277 (371)
T ss_pred ceEEECCccccCccCCceEEEEcCHHHHH-hhcccCccccCCC-------------CcceEeeccChHHHHHHHHHhhhc
Confidence 99999999999989999999988775443 3333334543211 112233443 24568889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHH
Q 037144 372 VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNREL 451 (502)
Q Consensus 372 ~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 451 (502)
.+|++++.++..+++++|.+.|+++ +++++.++..++++|.+.+ ..++
T Consensus 278 ~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~-------------------------------~~~v 325 (371)
T PRK13520 278 REGYRKVVERCMENTRWLAEELKER-GFEPVIEPVLNIVAFDDPN-------------------------------PDEV 325 (371)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCceEEEEecCC-------------------------------HHHH
Confidence 9999999999999999999999988 8985556677888887642 2356
Q ss_pred HHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 452 LESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 452 ~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
.++|.++|..+ ... .+..++|++++. .++++||+++++.|+++.+
T Consensus 326 ~~~L~~~gi~v-~~~--~~~~~iRis~~~-~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 326 REKLRERGWRV-SVT--RCPEALRIVCMP-HVTREHIENFLEDLKEVKK 370 (371)
T ss_pred HHHHHHCCcee-ccC--CCCCEEEEEEEC-CCCHHHHHHHHHHHHHHhh
Confidence 66677778643 321 234589999864 6788899999999998765
No 15
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=100.00 E-value=2.2e-34 Score=293.13 Aligned_cols=368 Identities=20% Similarity=0.258 Sum_probs=265.7
Q ss_pred CHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCc
Q 037144 55 SVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKS 134 (502)
Q Consensus 55 ~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~ 134 (502)
+.+++++.+.+ ++.+..+.++++++..+...+.++. .+.+..++..+.......|....+++++.+++++++|+++.
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~ 77 (373)
T TIGR03812 1 SEEEVLEELKE-YRSEDLKYSDGRILGSMCTNPHPIA--VKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDA 77 (373)
T ss_pred CHHHHHHHHHH-HHhcCCCCCCCcEEEEEeCCchHHH--HHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCC
Confidence 46789999998 4567777788898888766544442 22333333222111122356678889999999999999764
Q ss_pred cCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcc
Q 037144 135 FLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYG 214 (502)
Q Consensus 135 ~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~ 214 (502)
.+++++||+++++.++.+++..... +.+++.|+++..+|+++.++++..|+ +++.+|+++ ++.
T Consensus 78 -------~~~~~~g~~~~~~~~~~~~~~~~~~-----~~~g~~vl~~~~~h~~~~~~~~~~G~---~~~~v~~~~--~~~ 140 (373)
T TIGR03812 78 -------YGYIVSGGTEANIQAVRAAKNLARE-----EKRTPNIIVPESAHFSFEKAAEMLGL---ELRYAPLDE--DYT 140 (373)
T ss_pred -------CeEEeccHHHHHHHHHHHHHHHHhc-----cCCCcEEEECCcchHHHHHHHHHcCC---eEEEEeeCC--CCC
Confidence 5788999999998887766542110 01456889999999999999999999 999999875 568
Q ss_pred cCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccch----hhhcCCC
Q 037144 215 LSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFR----HFIDGVE 290 (502)
Q Consensus 215 ~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~----~~~~~~~ 290 (502)
+|+++|++++++++ ..|+.+.++|++|.++|+++|.++|+++|+|+|||+||+++........ ..--...
T Consensus 141 ~d~~~l~~~l~~~~------~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~ 214 (373)
T TIGR03812 141 VDVKDVEDLIDDNT------IGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLP 214 (373)
T ss_pred cCHHHHHHHHhhCc------EEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCC
Confidence 99999999997643 2455555899999999999999999999999999999987754321110 0000123
Q ss_pred CCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHH
Q 037144 291 CVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRN 369 (502)
Q Consensus 291 ~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~ 369 (502)
++|++++++|||+..|.++|.++++++..+. .+....+|+.... .+...++|. ...++++.+++.
T Consensus 215 ~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~-~l~~~~~~~~~~~-------------~~~~~gt~~~~~~~~~~~~l~~ 280 (373)
T TIGR03812 215 GVQSITIDPHKMGLSPIPAGGILFRSKSYLK-YLSVDAPYLTVKK-------------QATITGTRSGASAAATYAVIKY 280 (373)
T ss_pred CCCEEEECccccCCCcCCceEEEEeCHHHHh-hhcccCcccCCCC-------------CcceEeechhHHHHHHHHHHHH
Confidence 7899999999998889999988887765543 3333334443211 112334554 345688899999
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHH
Q 037144 370 FGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNR 449 (502)
Q Consensus 370 ~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (502)
++.+|++++.++..+++++|++.|+++ +++.+.++..++++|+.++ ..
T Consensus 281 l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~-------------------------------~~ 328 (373)
T TIGR03812 281 LGREGYRKIVAECMENTRYLVEELKKI-GFEPVIEPVLNIVAFEVDD-------------------------------PE 328 (373)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCCceEEEEEeCC-------------------------------HH
Confidence 999999999999999999999999998 5665546777888887642 12
Q ss_pred HHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 450 ELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 450 ~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
.+.++|.++|.+ +... .+..++|++++. .++++|+++++++|+++
T Consensus 329 ~v~~~L~~~gi~-v~~~--~~~~~iRis~~~-~~t~edid~l~~~L~~~ 373 (373)
T TIGR03812 329 EVRKKLRDRGWY-VSVT--RCPKALRIVVMP-HVTREHIEEFLEDLKEI 373 (373)
T ss_pred HHHHHHHHCCce-eccC--CCCCEEEEEEEC-CCCHHHHHHHHHHHhhC
Confidence 566777777864 3332 235689999875 47778999999999763
No 16
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-34 Score=292.46 Aligned_cols=355 Identities=15% Similarity=0.132 Sum_probs=265.1
Q ss_pred cccccCCCCCCHHHHHHHHHHhhc---CCC--CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144 78 NYFAYFPATSSVAGIVGEMLSSGF---NVV--GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA 152 (502)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~---n~~--~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a 152 (502)
.||.+..++. .|..+.+.+..++ +.| ...+..+..+++.+.++++.+++++|.++.. +.+||.|+|++
T Consensus 24 vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~------eIvft~~tT~a 96 (405)
T COG0520 24 VYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSD------EIVFTRGTTEA 96 (405)
T ss_pred EEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCC------eEEEeCChhHH
Confidence 5777665544 6677777766644 222 3455566677889999999999999998522 79999999999
Q ss_pred HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH
Q 037144 153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV 228 (502)
Q Consensus 153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~ 228 (502)
+.......... .+ ++++|++|...|+| |...++..|+ +++.+|+++ ++.+|.+++++.+++++
T Consensus 97 ln~va~~l~~~-~~-------~gdeIv~s~~EH~sn~~pw~~~~~~~Ga---~v~~i~~~~--~g~~~~~~~~~~i~~~T 163 (405)
T COG0520 97 LNLVARGLGRS-LK-------PGDEIVVSDLEHHSNIVPWQELAKRTGA---KVRVIPLDD--DGLLDLDALEKLITPKT 163 (405)
T ss_pred HHHHHHHhhhh-hc-------CCCEEEEccCcchhhHHHHHHHHHhcCc---EEEEEecCC--CCCcCHHHHHHhcCCCc
Confidence 76554443211 11 67899999999976 6777888899 999999984 57999999999888776
Q ss_pred hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc
Q 037144 229 EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD 308 (502)
Q Consensus 229 ~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~ 308 (502)
+ +|++++.+|.+|.+.|+++|+++||++|+|+.|||||+.+.++.+-... ++|++.+++|||+++|.|
T Consensus 164 k------lvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l------~~Df~afsgHKwl~gP~G 231 (405)
T COG0520 164 K------LVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQEL------GCDFLAFSGHKWLLGPTG 231 (405)
T ss_pred e------EEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhc------CCCEEEEcccccccCCCc
Confidence 5 9999999999999999999999999999999999999999988764322 899999999999999999
Q ss_pred ceEEEeeCchhhhhhhcCCcccccCccCCCC--C-cccccCCCcccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHH
Q 037144 309 CCCLWVKDPSCLLSTLSTNPQYLKNEATDQE--P-KEQEVGYKDWQITLCRR--FRSLKLWVVIRNFGVANLRNFIRSHV 383 (502)
Q Consensus 309 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~--~-~~~~~~~~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~ 383 (502)
+|++++|+... .. ..++......... . ....+....+.++.+.+ ...+.+-++++.+...|+.++.++..
T Consensus 232 iGvLy~r~~~l-~~----l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~ 306 (405)
T COG0520 232 IGVLYVRKELL-EE----LEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHER 306 (405)
T ss_pred eEEEEEchHHH-hh----cCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHH
Confidence 99999987643 21 1233322211100 0 00112222334444443 23456778888888889999999999
Q ss_pred HHHHHHHHHHhcCCCeEEecCC---CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCc
Q 037144 384 GMAKLFERLVTSDKRFEVAFPR---NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGK 460 (502)
Q Consensus 384 ~la~~l~~~l~~~~~~~l~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 460 (502)
++++++.+.|+++|++++++++ ..++++|.+.... +..+...|.++|+
T Consensus 307 ~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~-----------------------------~~dv~~~L~~~gI 357 (405)
T COG0520 307 ELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIH-----------------------------PHDVATLLDEKGI 357 (405)
T ss_pred HHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCC-----------------------------HHHHHHHHHhCCe
Confidence 9999999999999999999875 6889999987642 4567778888894
Q ss_pred EEEEeeeECC---------EEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 461 VFMTHAIVGG---------IYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 461 ~~~~~~~~~g---------~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
+...+ .... ...+|+|+. +++|++|||+++++|+++.+
T Consensus 358 ~vr~g-~~ca~p~~~~~~~~~~iR~S~~-~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 358 AVRAG-HHCAQPLHRLLGVDATIRASLH-LYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred EEEec-cccccHHHHhcCCCCceEEEEe-ecCCHHHHHHHHHHHHHHhh
Confidence 43332 1111 233999996 55777799999999998753
No 17
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-34 Score=277.90 Aligned_cols=387 Identities=16% Similarity=0.201 Sum_probs=296.2
Q ss_pred CCCCCCCCCHHHHHHHHHHhhcCCCCCCCCC-cccccCCCCCCHHHHHHHHHHhhcCC-CCcccccChhhHHHHHHHHHH
Q 037144 47 ESAPYSPESVETILQDVQEHIVPGITHWQSP-NYFAYFPATSSVAGIVGEMLSSGFNV-VGLDWISSPAAVELENIVMDW 124 (502)
Q Consensus 47 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~l~~~~n~-~~~~~~~~p~~~~le~~~~~~ 124 (502)
..+|.+|.+-+++++.+.+..+-+...+..+ .+..|.. .+. ...++...+|. |...-...|....+|++++++
T Consensus 54 ~~lP~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~-~~~----~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm 128 (491)
T KOG1383|consen 54 FTLPSKGLPKDAVLELINDELMLDGNPRLGLASGVVYWG-EPE----LDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNM 128 (491)
T ss_pred ecCCCCCCCHHHHHHHHHHHhccCCCcccCeeeEEEecC-Ccc----hhhHHHHHHhhcCccCccccchhHHHHHHHHHH
Confidence 5789999999999999988765443322222 1222221 233 33444444444 555667889999999999999
Q ss_pred HHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEE
Q 037144 125 LGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRA 204 (502)
Q Consensus 125 l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~ 204 (502)
++.||+.+.. ..|..|+|||+|.+++....+++.... .++..+.++++...|.+++|+++++++ .++.
T Consensus 129 ~~~L~~~~~~------~~g~~t~G~Ses~l~~~k~~~~~r~~~---k~I~~p~iv~~~~v~~a~eK~a~yf~v---~l~~ 196 (491)
T KOG1383|consen 129 IANLFNAPSD------SCGCGTVGGSESGLAAKKSYRNRRKAQ---KGIDKPNIVTPQNVHAAFEKAARYFEV---ELRE 196 (491)
T ss_pred HHHHhcCCcc------ccCccccccchHHHHHHHHHHHHHHhc---cCCCCccccchHHHHHHHHHHHhhEEE---EEEe
Confidence 9999999854 268899999999877777777654432 356778899999999999999999999 9999
Q ss_pred EecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH-hCCEEEeecccccccccCccc-
Q 037144 205 IKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ-FGIWVHVDAAYAGSACICPEF- 282 (502)
Q Consensus 205 v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~-~g~~lhVDaA~g~~~~~~~~~- 282 (502)
||+++ +++++|+..+.+.+++++ .+|++..|++++|.+||+++|+++..+ |++.+|||+|.|++..+.-.+
T Consensus 197 V~~~~-~~~~~D~~k~~~~i~eNt------i~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~ 269 (491)
T KOG1383|consen 197 VPLDE-GDYRVDPGKVVRMIDENT------IMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLN 269 (491)
T ss_pred eeccc-cceEecHHHHHHHhccce------EEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccC
Confidence 99997 479999999999999886 499999999999999999999999998 999999999999988751111
Q ss_pred hhhh-cCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCC-c
Q 037144 283 RHFI-DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFR-S 360 (502)
Q Consensus 283 ~~~~-~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~-a 360 (502)
...+ -+..++-|++.+.||++.+|.|.|+++.|++..+...+...+.|+... +..+|+.+||+.. .
T Consensus 270 ~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~------------y~s~TlngSR~g~~v 337 (491)
T KOG1383|consen 270 EEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGI------------YASPTLNGSRPGSQV 337 (491)
T ss_pred ccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCcc------------ccCcccccCCcccHH
Confidence 1111 134588899999999999999999999999988776666677777643 3446899999854 5
Q ss_pred hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccch
Q 037144 361 LKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSE 440 (502)
Q Consensus 361 l~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (502)
.+.|+++-.+|.+||.+..+++.+.+++|+++|++++++.++++|...++.|.-..-
T Consensus 338 a~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~----------------------- 394 (491)
T KOG1383|consen 338 AAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDV----------------------- 394 (491)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCcc-----------------------
Confidence 689999999999999999999999999999999999999999987765555532211
Q ss_pred hHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 441 EERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 441 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+. -++.+.|.+.|..+-..+. ...+-+|++--++.++-.++++..|+++.++
T Consensus 395 ----~i--~elsd~l~~~GW~lnalq~---P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~e 446 (491)
T KOG1383|consen 395 ----NI--FELSDLLRKKGWILNALQF---PAAIHICVTRVHAREDVADRFVADIRKVVEE 446 (491)
T ss_pred ----ch--hhhhHHHHhcCcCccccCC---CCceEEEEEeeeccHHHHHHHHHHHHHHHHH
Confidence 11 2566777777976433322 2245555554445665567888877777654
No 18
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-33 Score=271.64 Aligned_cols=340 Identities=15% Similarity=0.125 Sum_probs=253.6
Q ss_pred CcccccCCCCCCHHHHHHHHHH---hhc-CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144 77 PNYFAYFPATSSVAGIVGEMLS---SGF-NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA 152 (502)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~---~~~-n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a 152 (502)
+-||.|..+++..|.++..++. ..+ |+.. .+..+..+..+-+++++.+++++|+++. +.+|||||||+
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~~-------eIiFTSG~TEs 73 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSS-LHSFGREARKAVEEAREQIAKLLGADPE-------EIIFTSGATES 73 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCCccc-hhHhHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEecCCcHH
Confidence 4588888888888877766543 333 5444 5556777777777899999999999875 79999999999
Q ss_pred HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc---CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh
Q 037144 153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV---GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE 229 (502)
Q Consensus 153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~---Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~ 229 (502)
|.+|+..+.....++ ..+-.|++|...|.++...++.+ |+ +|.++|++. +|.+|+++|+++|++++
T Consensus 74 nNlaI~g~~~a~~~~-----~~~~HIIts~iEH~aVl~~~~~Le~~g~---~Vtyl~V~~--~G~v~~e~L~~al~~~T- 142 (386)
T COG1104 74 NNLAIKGAALAYRNA-----QKGKHIITSAIEHPAVLNTCRYLERQGF---EVTYLPVDS--NGLVDLEQLEEALRPDT- 142 (386)
T ss_pred HHHHHHhhHHhhhcc-----cCCCeEEEcccccHHHHHHHHHHHhcCC---eEEEeCCCC--CCeEcHHHHHHhcCCCc-
Confidence 999998754322111 13457899999999999999988 88 999999986 57999999999999876
Q ss_pred cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc
Q 037144 230 AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC 309 (502)
Q Consensus 230 ~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~ 309 (502)
.+|.+.+.+|.+|.+.||++|+++|+++|++||||++++.+-++.+-... .+|.+++++||+ ++|.|+
T Consensus 143 -----~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~------~vD~ls~SaHK~-~GpkGi 210 (386)
T COG1104 143 -----ILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEEL------GVDLLSFSAHKF-GGPKGI 210 (386)
T ss_pred -----eEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceecccccc------CcceEEeehhhc-cCCCce
Confidence 48999999999999999999999999999999999999999888764322 599999999996 569999
Q ss_pred eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCch------HHHHHHHHhcHHHHHHHHHHHH
Q 037144 310 CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSL------KLWVVIRNFGVANLRNFIRSHV 383 (502)
Q Consensus 310 g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al------~~~~~l~~~g~~g~~~~~~~~~ 383 (502)
|++|+|+...+ .+.+.... .+.++|.... ++-.+++ +..+.+.....+..
T Consensus 211 GaLyv~~~~~~-------~p~i~GGg----------------QE~g~RsGTenv~~Ivg~~~A~~-~a~~~~~~~~~~~~ 266 (386)
T COG1104 211 GALYVRPGVRL-------EPLIHGGG----------------QERGLRSGTENVPGIVGFGKAAE-IAVEELEEENARLR 266 (386)
T ss_pred EEEEECCCCcc-------CceeccCc----------------CCCCCCCCCccHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 99999655322 12333222 2234444332 2223333 24567788888999
Q ss_pred HHHHHHHHHHhcC-CCeEEecCC--C-eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcC
Q 037144 384 GMAKLFERLVTSD-KRFEVAFPR--N-FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSG 459 (502)
Q Consensus 384 ~la~~l~~~l~~~-~~~~l~~~~--~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 459 (502)
.++++|.+.|.+. |++.+.+.+ . .++++|.++... .+.+.-.|...|
T Consensus 267 ~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~-----------------------------gE~ll~~L~~~g 317 (386)
T COG1104 267 KLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVE-----------------------------GESLLLALDLAG 317 (386)
T ss_pred HHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCc-----------------------------HHHHHHhccccC
Confidence 9999999999875 888887643 2 356677776532 234555555556
Q ss_pred cEEEEeee-----E--------------CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 460 KVFMTHAI-----V--------------GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 460 ~~~~~~~~-----~--------------~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+..-++.. . .-...||||++ ..|+++|||++++.++++.+.
T Consensus 318 I~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g-~~tt~eei~~~~~~l~~~i~~ 377 (386)
T COG1104 318 IAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLG-RFTTEEEIDAAAEALKEIIKR 377 (386)
T ss_pred eEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcC-CCCCHHHHHHHHHHHHHHHHH
Confidence 54322210 0 11468999996 678888999999999998764
No 19
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=4.6e-30 Score=267.79 Aligned_cols=396 Identities=14% Similarity=0.096 Sum_probs=257.7
Q ss_pred chhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhh-cCCCCccc---ccChh
Q 037144 38 PGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSG-FNVVGLDW---ISSPA 113 (502)
Q Consensus 38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~n~~~~~~---~~~p~ 113 (502)
|+.++..-+..+|+ .|..++++++.++...+.... ..|.|.-.+...+|..+.+.+... ...+...| ..+.+
T Consensus 35 p~~~~~~~~~~~~~--~se~~~~~~~~~l~~~n~~~~--~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG 110 (481)
T PRK04366 35 PEELLRKEPPELPE--VSELEVVRHYTRLSQKNYGVD--TGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQG 110 (481)
T ss_pred CHHHhcCCCCCCCC--CCHHHHHHHHHHHHhcCCCCC--cceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhH
Confidence 44554333445676 899999999998866664322 256666533434444444444333 12344456 35667
Q ss_pred hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144 114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ 193 (502)
Q Consensus 114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~ 193 (502)
..++..++.+|+++++|+++ ..+..++|+.+.++++.+++.....+ |. .++..|+++...|.++...++
T Consensus 111 ~lel~~~~~~~la~l~G~~~--------~~l~~~~GA~a~~~~l~~~r~~~~~~-Gd--~~~~~Vlv~~~~hp~~~~~~~ 179 (481)
T PRK04366 111 ALELMYELQEWLKEITGMDA--------VTLQPAAGAHGELTGLLMIRAYHEAR-GD--TKRTEVIVPDSAHGTNPASAA 179 (481)
T ss_pred HHHHHHHHHHHHHHHhCCCc--------eEEEeCcHHHHHHHHHHHHHHHhhcc-Cc--CCCCEEEEcCCccHhHHHHHH
Confidence 88999999999999999974 34666777777777666554322111 10 134578899999999999999
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-CChhHHHHHHHHhCCEEEeeccc
Q 037144 194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-DPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-dpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
..|+ +++.+|++. +|.+|+++|+++++++++ +|+++.++ ++|.+ +|+++|+++|+++|+|+|||+|+
T Consensus 180 ~~G~---~vv~v~~~~--~~~~D~e~L~~~i~~~t~------~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~ 247 (481)
T PRK04366 180 MAGF---KVVEIPSNE--DGLVDLEALKAAVGEDTA------ALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGAN 247 (481)
T ss_pred HcCC---EEEEeecCC--CCCcCHHHHHhhcccCCe------EEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecC
Confidence 9999 999999964 479999999999976543 67777777 89988 69999999999999999999999
Q ss_pred ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc-----eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCC
Q 037144 273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC-----CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGY 347 (502)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~-----g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 347 (502)
..+.+..-.... .++|++++++||||++|.++ |+++++++. .+.+ ++.+.... . ......+
T Consensus 248 ~~~~~g~~~~~~-----~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~--~~~l---p~~~v~~~-g---~~~~l~~ 313 (481)
T PRK04366 248 LNAILGKARPGD-----MGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEEL--APFL---PVPVVEKD-G---DRYRLDY 313 (481)
T ss_pred hhhhcccCCccc-----cCCCEEEEechhhcCCCCCCCCCCeeeeeehhhh--HhhC---CCCeeecc-C---Cceeecc
Confidence 655332111111 28999999999999988765 478887542 1222 11111100 0 0000001
Q ss_pred -CcccccCCCCCC-----chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcch
Q 037144 348 -KDWQITLCRRFR-----SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVM 420 (502)
Q Consensus 348 -~~~~~~~sr~~~-----al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~ 420 (502)
....+...+.+. ++++|..+..+|.+|++++.++...++++|+++|+++ +++..+ +....+.|.......
T Consensus 314 ~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~- 390 (481)
T PRK04366 314 DRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLKE- 390 (481)
T ss_pred cccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECccccc-
Confidence 111111112222 3688889999999999999999999999999999987 444322 223333343211000
Q ss_pred hhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee-ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI-VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
. +....++.++|.++|+....... ......+|++++ ..++++|||+++++|+++.
T Consensus 391 -------------------~----g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~-e~~t~edid~l~~~l~~i~ 446 (481)
T PRK04366 391 -------------------T----GVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPT-ETESKETLDAFIAAMKQIA 446 (481)
T ss_pred -------------------c----CCCHHHHHHHHHHCCccCCccccccccCCeEEEccc-CCCCHHHHHHHHHHHHHHH
Confidence 0 01145677888888864321100 012457999986 4577789999999999886
Q ss_pred Hh
Q 037144 500 EA 501 (502)
Q Consensus 500 ~~ 501 (502)
++
T Consensus 447 ~~ 448 (481)
T PRK04366 447 EE 448 (481)
T ss_pred HH
Confidence 54
No 20
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=4.1e-30 Score=277.41 Aligned_cols=381 Identities=12% Similarity=0.079 Sum_probs=266.7
Q ss_pred CHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCccccc-----ChhhHHHHHHHHHHHHHhc
Q 037144 55 SVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWIS-----SPAAVELENIVMDWLGQML 129 (502)
Q Consensus 55 ~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~-----~p~~~~le~~~~~~l~~l~ 129 (502)
|..++++.+.++-..+..-. + .|++--.. ........+++....+.....+.. +.+..+++.++..||++++
T Consensus 467 sE~e~~r~~~~L~~kn~~~~-~-~fi~lGsc-tmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~elt 543 (939)
T TIGR00461 467 SETEMLRYLHRLESKDLALN-N-SMIPLGSC-TMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSIT 543 (939)
T ss_pred CHHHHHHHHHHHHhcCCCcc-c-cCCCCccC-CCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHH
Confidence 88999999998766554322 2 34443222 223333555554444333222233 3458899999999999999
Q ss_pred CCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC
Q 037144 130 DLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK 209 (502)
Q Consensus 130 g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~ 209 (502)
|+++ .++..++|+++++++++++|..... .|. .++.+|++|..+|.+..++++..|+ +++.||++.
T Consensus 544 Gmd~--------~Sl~p~aGA~gE~agL~aiR~y~~~-rge--~~R~~vlip~saHgtnPasa~~~G~---~Vv~V~~d~ 609 (939)
T TIGR00461 544 GFDA--------ISLQPNSGAQGEYAGLRVIRSYHES-RGE--NHRNICLIPVSAHGTNPASAAMAGM---QVVPVNCDQ 609 (939)
T ss_pred CCCC--------cccCCchHHHHHHHHHHHHHHHHHh-cCC--CCCCEEEEEccccCcCHHHHHHCCC---EEEEeccCC
Confidence 9995 3678888999999999998875421 121 1567899999999999999999999 999999975
Q ss_pred CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC-hhHHHHHHHHhCCEEEeecccccccccCccchhhhcC
Q 037144 210 SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP-LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDG 288 (502)
Q Consensus 210 ~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp-l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~ 288 (502)
+|.+|+++|++++++ .+..+.+|++|+++| +|.++| |++|+++|+++|.|++||||+............
T Consensus 610 --~G~iDle~L~~~i~~---~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~---- 679 (939)
T TIGR00461 610 --DGNIDLVDLKNKAEQ---HGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGD---- 679 (939)
T ss_pred --CCCcCHHHHHHHHhh---cCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccc----
Confidence 579999999999975 233467999999998 799977 999999999999999999999664433322222
Q ss_pred CCCCCeeEEccCCcCCCCCcc-----eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCc---
Q 037144 289 VECVDSFSFNPHKWLFTTLDC-----CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRS--- 360 (502)
Q Consensus 289 ~~~aDsi~~~~hK~l~~p~~~-----g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~a--- 360 (502)
-++|+++++.||+|+.|.|+ |++++|+. +...+... . +... .+ ..+. ..+.+...++.+++
T Consensus 680 -~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~--L~~~lPg~-~-v~~t-~d---~~gr--eq~Iga~s~~~~g~a~~ 748 (939)
T TIGR00461 680 -LGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH--LIPFLPKH-D-VVSM-IT---GIGG--SKSIGSVSAAPYGSASI 748 (939)
T ss_pred -cCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh--chhhcCCC-c-cccc-cc---CCCC--ccccccccccccCcHHH
Confidence 28999999999999966555 99999854 22222111 1 1110 00 0000 01112223344555
Q ss_pred -hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC----CCeeEEEEEeecCcchhhhhhcccCCCcccc
Q 037144 361 -LKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP----RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQY 435 (502)
Q Consensus 361 -l~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 435 (502)
++.|+.++.+|.+|+++..+....+|+|+.++|.+ +++++.+ +...-++|++.+..
T Consensus 749 ~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~~----------------- 809 (939)
T TIGR00461 749 LPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPLK----------------- 809 (939)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccchh-----------------
Confidence 89999999999999999999999999999999987 5677654 23555788876521
Q ss_pred cccchhHhhHHHHHHHHHHHHhcCcEEEEee-eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 436 RQFSEEERTNEFNRELLESINVSGKVFMTHA-IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 436 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
++.+..+.++.++|.+.|+...+.+ ...+...+|.+- .++.+|||++++++.++.++
T Consensus 810 ------~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE---~eskeelD~f~~al~~I~~e 867 (939)
T TIGR00461 810 ------AKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTE---SESLEELDRFCDAMIAIKEE 867 (939)
T ss_pred ------hhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeec---cCCHHHHHHHHHHHHHHHHH
Confidence 1112336788899999997644422 234555666654 46788999999999888764
No 21
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.97 E-value=2.3e-29 Score=276.54 Aligned_cols=380 Identities=12% Similarity=0.068 Sum_probs=257.2
Q ss_pred CCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCC--ccc---ccChhhHHHHHHHHHHHHHh
Q 037144 54 ESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVG--LDW---ISSPAAVELENIVMDWLGQM 128 (502)
Q Consensus 54 ~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~--~~~---~~~p~~~~le~~~~~~l~~l 128 (502)
.|..++++.+.++-..+.....+..++|. ......|......+ ..+... +.| +.+.+..+++.++.+|++++
T Consensus 478 ~sE~e~~r~~~~l~~kn~~~~~~~i~lGs-ct~~~~p~~~~~~~--~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~el 554 (954)
T PRK05367 478 HSETEMMRYLRRLEDKDLALDRSMIPLGS-CTMKLNAAAEMIPI--TWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEI 554 (954)
T ss_pred CCHHHHHHHHHHHHhcCcCcccceeeCCc-CCCcCCHHHHHHHH--hCccccccCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999999987777654445566777 22333333322222 222211 111 23445789999999999999
Q ss_pred cCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecC
Q 037144 129 LDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTT 208 (502)
Q Consensus 129 ~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~ 208 (502)
+|++. ..+..+||+++++.+++++|.....+ |. .++.+|++|+.+|.|+.+++.++|+ +++.||++
T Consensus 555 tG~d~--------~sl~~~~ga~ge~agL~a~r~~~~~~-G~--~~r~~vlis~~aH~snp~sa~~~G~---~vv~v~~d 620 (954)
T PRK05367 555 TGYDA--------VSLQPNAGAQGEYAGLLAIRAYHESR-GE--GHRDVCLIPSSAHGTNPASAVMAGM---KVVVVACD 620 (954)
T ss_pred HCCCC--------EEECccHHHHHHHHHHHHHHHHhhcc-CC--CCCCEEEEEchhhhhhHHHHHHCCC---EEEEECCC
Confidence 99984 23446678899999988777542221 11 1356899999999999999999999 99999998
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcC
Q 037144 209 KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDG 288 (502)
Q Consensus 209 ~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~ 288 (502)
. +|.+|+++|++++++. +..+++|+++.++|..+..+||++|+++|+++|+|+|||||+.++.+.......
T Consensus 621 ~--~G~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~---- 691 (954)
T PRK05367 621 E--NGNIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGD---- 691 (954)
T ss_pred C--CCCcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhh----
Confidence 5 4699999999999753 124678899999988444599999999999999999999999765444332212
Q ss_pred CCCCCeeEEccCCcCCCCCcce-----EEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCC----C
Q 037144 289 VECVDSFSFNPHKWLFTTLDCC-----CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRF----R 359 (502)
Q Consensus 289 ~~~aDsi~~~~hK~l~~p~~~g-----~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~----~ 359 (502)
-++|++++++||||++|.|+| ++++|+. +. +|+...... ...+....+...+.++ .
T Consensus 692 -~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~--l~-------p~lpg~~v~-----~~~~~~~~g~v~ta~~g~al~ 756 (954)
T PRK05367 692 -IGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH--LA-------PFLPGHPVQ-----IAGGETGIGAVSAAPFGSASI 756 (954)
T ss_pred -cCCCEEEecCcccCCCCcCCCCCceEEEeeccc--cc-------ccCCCCccC-----cCCCCCCcCcchhHHHHHHHH
Confidence 289999999999998887755 8888742 21 222211100 0000000111122222 3
Q ss_pred chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--C--CCeeEEEEEeecCcchhhhhhcccCCCcccc
Q 037144 360 SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF--P--RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQY 435 (502)
Q Consensus 360 al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~--~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 435 (502)
++..|..++.+|.+|+++..++...+|+|+.++|++. +++.. + +...-++|.+.+...
T Consensus 757 ~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~--~~~~~~~~~~~~~~e~i~~~~~~~~---------------- 818 (954)
T PRK05367 757 LPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH--YPVLYTGANGRVAHECILDLRPLKE---------------- 818 (954)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh--cCccccCCCCCcccceEEEeecccc----------------
Confidence 3568999999999999999999999999999999874 44432 1 223445555543210
Q ss_pred cccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 436 RQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 436 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..+..+..+.++|.+.|+...+. .+...+.+|++.+. .++++|||+++++|.++.++
T Consensus 819 -------~~g~~~~di~krL~d~G~~~~t~-~~pv~~~l~i~ptE-~~s~~elDr~~~al~~i~~e 875 (954)
T PRK05367 819 -------STGITVDDIAKRLIDYGFHAPTM-SFPVAGTLMVEPTE-SESKAELDRFCDAMIAIRAE 875 (954)
T ss_pred -------cCCCCHHHHHHHHHHCCCeEeec-CCccCCEEEEEeee-cCCHHHHHHHHHHHHHHHHH
Confidence 00011356788888889754442 23345678999874 57778999999999888654
No 22
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.97 E-value=3.8e-29 Score=254.90 Aligned_cols=312 Identities=14% Similarity=0.142 Sum_probs=222.7
Q ss_pred hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH----
Q 037144 114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ---- 189 (502)
Q Consensus 114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~---- 189 (502)
......++++++++++|.+... .+++|+|+|+++..++.+... +++.|+++...|.++.
T Consensus 42 ~~~~~~~~~~~la~~~~~~~~~------~v~~~~g~t~al~~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~ 104 (376)
T TIGR01977 42 ASREVEETRQLLAKLFNAPSSA------HVVFTNNATTALNIALKGLLK-----------EGDHVITTPMEHNSVARPLE 104 (376)
T ss_pred HHHHHHHHHHHHHHHhCcCCCC------eEEEeCCHHHHHHHHHHhccC-----------CCCEEEECcchhhHHHHHHH
Confidence 3466677889999999986532 588999999988766654221 5678888888998754
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEee
Q 037144 190 KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVD 269 (502)
Q Consensus 190 ~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVD 269 (502)
..++..|+ +++.++.+. ++.+|+++|+++++++ +.+|++++++|++|.+.|+++|.++|+++|++++||
T Consensus 105 ~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~~~------~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD 173 (376)
T TIGR01977 105 CLKEQIGV---EITIVKCDN--EGLISPERIKRAIKTN------TKLIVVSHASNVTGTILPIEEIGELAQENGIFFILD 173 (376)
T ss_pred HHHHHcCc---EEEEEecCC--CCCcCHHHHHHhcCCC------CeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEE
Confidence 45566788 999999875 4689999999998643 348889999999999999999999999999999999
Q ss_pred cccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCc
Q 037144 270 AAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKD 349 (502)
Q Consensus 270 aA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 349 (502)
+|++.+....+... .++|++++++|||+++|.|+|++++++...+.........+.. ...+ ......
T Consensus 174 ~a~~~g~~~~~~~~------~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~ 240 (376)
T TIGR01977 174 AAQTAGVIPIDMTE------LAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHS-ALID------QPSELP 240 (376)
T ss_pred hhhccCccCCCchh------cCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCcccc-cccc------ccccch
Confidence 99988876554221 2799999999999999999999999877532211111000000 0000 000000
Q ss_pred ccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC----CeeEEEEEeecCcchhhh
Q 037144 350 WQITLCRR--FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR----NFSLVCFRVTPSAVMDKL 423 (502)
Q Consensus 350 ~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~----~~~~v~f~~~~~~~~~~~ 423 (502)
..++.+.. ...++++.+++.+...|.+.+.++..++++++.+.|++.++++++.+. ..++++|......
T Consensus 241 ~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----- 315 (376)
T TIGR01977 241 DRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGID----- 315 (376)
T ss_pred hhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCCC-----
Confidence 01111111 123567778888888899999999999999999999999999998642 3568888774321
Q ss_pred hhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeE-----------CCEEEEEEEecCCCCcHHHHHHH
Q 037144 424 RTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIV-----------GGIYVLRFAAGNSMTMESHVRAA 491 (502)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~-----------~g~~~lR~~~~~~~t~~~di~~~ 491 (502)
..++.+.|.++ |.. +..+.+ .....+|++++ ..++++||+++
T Consensus 316 ------------------------~~~~~~~L~~~~gi~-v~~g~~~~~~~~~~~g~~~~~~iRis~~-~~~t~~dv~~~ 369 (376)
T TIGR01977 316 ------------------------SEEVADILDEKFDIA-TRTGLHCAPLAHKTIGTFATGTIRLSLG-YFNTEEEIEKL 369 (376)
T ss_pred ------------------------HHHHHHHHhccCCEE-EEcccccchHHHHHhCCCCCCeEEEecC-CCCCHHHHHHH
Confidence 24567777776 643 332221 13468999975 56778899999
Q ss_pred HHHHHH
Q 037144 492 WTVVQE 497 (502)
Q Consensus 492 ~~~l~~ 497 (502)
+++|++
T Consensus 370 ~~~l~~ 375 (376)
T TIGR01977 370 LEALSE 375 (376)
T ss_pred HHHHhh
Confidence 999975
No 23
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.97 E-value=8.9e-29 Score=254.58 Aligned_cols=356 Identities=15% Similarity=0.113 Sum_probs=242.2
Q ss_pred cccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144 78 NYFAYFPATSSVAGIVGEMLSSGF-----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA 152 (502)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a 152 (502)
.||++-..++.+..++ +.+..++ |.....+..++.+.....++++.+++++|.++. ...+||+|+|++
T Consensus 25 iYld~a~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~------~~v~~t~g~t~~ 97 (406)
T PRK09295 25 AYLDSAASAQKPSQVI-DAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSA------EELVFVRGTTEG 97 (406)
T ss_pred EEEeCcccccCCHHHH-HHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCC------CeEEEeCCHHHH
Confidence 6888877666555544 4443333 222233444556677777899999999998422 168999999999
Q ss_pred HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH
Q 037144 153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV 228 (502)
Q Consensus 153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~ 228 (502)
+..++........+ +++.|+++...|.+ +...++..|+ +++.+|+++ ++.+|+++|++++++++
T Consensus 98 l~~~~~~~~~~~~~-------~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~i~~~t 165 (406)
T PRK09295 98 INLVANSWGNSNVR-------AGDNIIISEMEHHANIVPWQMLCARVGA---ELRVIPLNP--DGTLQLETLPALFDERT 165 (406)
T ss_pred HHHHHHHhhhhcCC-------CcCEEEECcchhhHHHHHHHHHHHHcCc---EEEEEecCC--CCCCCHHHHHHhcCCCc
Confidence 87665543211111 56788999988875 4556778899 999999875 46899999999986543
Q ss_pred hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc
Q 037144 229 EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD 308 (502)
Q Consensus 229 ~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~ 308 (502)
.+|++++++|++|.+.|+++|+++|+++|++++||++|+.+..+.+- .. .++|++++++||+ ++|.|
T Consensus 166 ------~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~-~~-----~~~D~~~~s~~K~-~gp~G 232 (406)
T PRK09295 166 ------RLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDV-QA-----LDCDFYVFSGHKL-YGPTG 232 (406)
T ss_pred ------EEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCc-hh-----cCCCEEEeehhhc-cCCCC
Confidence 48999999999999999999999999999999999999877655432 11 1789999999995 56889
Q ss_pred ceEEEeeCchhhhhhhcCCcccccCccCCCC-CcccccCC--CcccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHH
Q 037144 309 CCCLWVKDPSCLLSTLSTNPQYLKNEATDQE-PKEQEVGY--KDWQITLCRR--FRSLKLWVVIRNFGVANLRNFIRSHV 383 (502)
Q Consensus 309 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~-~~~~~~~~--~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~ 383 (502)
+|++++++.. +. .+ +++......... .......+ ....++.+.+ ...+++..+++.+...|++++.++..
T Consensus 233 ~G~l~~~~~~-~~-~~---~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~ 307 (406)
T PRK09295 233 IGILYVKEAL-LQ-EM---PPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQ 307 (406)
T ss_pred cEEEEEchHh-Hh-hC---CCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 9999987552 21 11 222221110000 00000000 1112232322 12357778888777778888899999
Q ss_pred HHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEE
Q 037144 384 GMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVF 462 (502)
Q Consensus 384 ~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 462 (502)
++++++.+.|+++++++++.+ ...++++|.++... ...+.+.|.+.|+.+
T Consensus 308 ~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~-----------------------------~~~~~~~L~~~gI~v 358 (406)
T PRK09295 308 NLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHH-----------------------------AYDVGSFLDNYGIAV 358 (406)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCcC-----------------------------HHHHHHHHHhCCeEE
Confidence 999999999999999999865 24678888875321 224555566667543
Q ss_pred EEeee--------ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 463 MTHAI--------VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 463 ~~~~~--------~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
.++.. .+..+++|+|+. ++++++|||+++++|+++..
T Consensus 359 ~~g~~c~~~~~~~~~~~~~iRiS~~-~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 359 RTGHHCAMPLMAYYNVPAMCRASLA-MYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred eccccchHHHHHHHCCCCEEEEEcc-CCCCHHHHHHHHHHHHHHHH
Confidence 22210 112358999985 66888899999999998754
No 24
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.97 E-value=1.3e-28 Score=251.32 Aligned_cols=339 Identities=12% Similarity=0.076 Sum_probs=232.4
Q ss_pred ccccCCCCCCHHHHHHHHHHhhcC----CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHH
Q 037144 79 YFAYFPATSSVAGIVGEMLSSGFN----VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALL 154 (502)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~ 154 (502)
||++...++.++.+ .+.+...+. +....+..++.+..+.+++++++++++|.+.+ .++||+|+|+++.
T Consensus 2 yld~aa~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~i~~t~~~t~a~~ 73 (379)
T TIGR03402 2 YLDNNATTRVDPEV-LEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD-------EIIFTSGGTESDN 73 (379)
T ss_pred cCCCcCCCCCCHHH-HHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCcHHHHHH
Confidence 66776666655554 444433331 11112223345667777899999999998754 5899999999998
Q ss_pred HHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH---HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC
Q 037144 155 CTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ---IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE 231 (502)
Q Consensus 155 ~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~---~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g 231 (502)
.++....... .++++|+++...|+++..... ..|+ +++.+|+++ ++.+|+++|++++++++
T Consensus 74 ~al~~~~~~~--------~~~~~vv~~~~~~~s~~~~~~~~~~~G~---~v~~v~~~~--~g~~~~~~l~~~i~~~~--- 137 (379)
T TIGR03402 74 TAIKSALAAQ--------PEKRHIITTAVEHPAVLSLCQHLEKQGY---KVTYLPVDE--EGRLDLEELRAAITDDT--- 137 (379)
T ss_pred HHHHHHHHhc--------CCCCeEEEcccccHHHHHHHHHHHHcCC---EEEEEccCC--CCcCCHHHHHHhcCCCc---
Confidence 8887664310 035688889999988765443 3588 999999875 46899999999996543
Q ss_pred CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceE
Q 037144 232 LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCC 311 (502)
Q Consensus 232 ~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~ 311 (502)
.+|++++++|++|.+.|+++|+++|+++|+++|||++++.+..+.+-.. .++|++++++|| +++|.|+|+
T Consensus 138 ---~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~------~~~D~~~~s~~K-~~gp~G~g~ 207 (379)
T TIGR03402 138 ---ALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKE------MNIDMLSLSGHK-LHGPKGVGA 207 (379)
T ss_pred ---EEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCccc------CCCCEEEEcHHH-cCCCCceEE
Confidence 4888899999999999999999999999999999999987766544221 279999999999 667999999
Q ss_pred EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-C-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 037144 312 LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-F-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLF 389 (502)
Q Consensus 312 ~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l 389 (502)
+++++...+ .+ ++...... ...+.+.. . ..+++..+++.. .++++++.++..++++++
T Consensus 208 l~v~~~~~~------~p-~~~g~~~~------------~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l 267 (379)
T TIGR03402 208 LYIRKGTRF------RP-LLRGGHQE------------RGRRAGTENVPGIVGLGKAAELA-TEHLEEENTRVRALRDRL 267 (379)
T ss_pred EEECCCCCC------CC-cccCCccC------------CCcCCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHH
Confidence 999765311 11 11111000 00111111 1 123444555543 457788888999999999
Q ss_pred HHHHhc-CCCeEEecCCC---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEe
Q 037144 390 ERLVTS-DKRFEVAFPRN---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTH 465 (502)
Q Consensus 390 ~~~l~~-~~~~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 465 (502)
++.|++ +|++++..++. .+++.|.+.... ..++.+.|.++|+.+.++
T Consensus 268 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~gI~v~~g 318 (379)
T TIGR03402 268 EAGLLARIPDARLNGDPTKRLPNTVNISFEYIE-----------------------------GEAILLLLDMEGICASSG 318 (379)
T ss_pred HHHHHhhCCCEEEeCCCccCCCCEEEEEecCCC-----------------------------HHHHHHhhccCCEEEEch
Confidence 999986 89999886432 346777664321 235566666667643322
Q ss_pred eeE-------------------CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 466 AIV-------------------GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 466 ~~~-------------------~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
... ...+.+|+|+. +.|+++|||++++.|+++++.
T Consensus 319 ~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~-~~~t~~di~~~~~~l~~~~~~ 372 (379)
T TIGR03402 319 SACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLS-RYNTEEDIDYVLEVLPPIIAR 372 (379)
T ss_pred hhcCCCCCCcCHHHHHcCCChhhcCceEEEEcC-CCCCHHHHHHHHHHHHHHHHH
Confidence 110 01368999985 668888999999999987654
No 25
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.97 E-value=7.5e-29 Score=258.24 Aligned_cols=385 Identities=12% Similarity=0.088 Sum_probs=249.4
Q ss_pred CchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHh-----hcCCCCcccccC
Q 037144 37 EPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSS-----GFNVVGLDWISS 111 (502)
Q Consensus 37 ~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~-----~~n~~~~~~~~~ 111 (502)
-|++++...+..+|+++ |.+++++++.+....+.....|++++|....+...|..+.+.+.. .++++... .+
T Consensus 31 ~p~~~~~~~~~~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~y~~~~~~--~~ 107 (447)
T PRK00451 31 IPEELRLKRPLDLPPGL-SEMELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVDHIISRSEFYTAYTPYQPE--IS 107 (447)
T ss_pred CCHHHHhCCCCCCCCCC-CHHHHHHHHHHHHhcCCCcCcCcccCcccccCCcCcHHHHHHHhchhHHHhcCCCCCc--cc
Confidence 37788888888899975 999999999987755554445788888543333344444333211 23443322 24
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH
Q 037144 112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA 191 (502)
Q Consensus 112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 191 (502)
++..+...+...|+++++|++.. .+++|+|||+++. ++..++... +++.|++++..|.++.++
T Consensus 108 ~g~~~~~~e~~~~la~l~g~~~~-------~v~~~~g~t~~~~-~~~~a~~~~---------~g~~Vlv~~~~~~~~~~~ 170 (447)
T PRK00451 108 QGTLQAIFEYQTMICELTGMDVA-------NASMYDGATALAE-AALMAVRIT---------KRKKVLVSGAVHPEYREV 170 (447)
T ss_pred hHHHHHHHHHHHHHHHHhCCCcc-------eEEecCcHHHHHH-HHHHHHHhc---------CCCEEEEeCccCHHHHHH
Confidence 55666777778899999999864 5789999997654 444443210 567888999999998887
Q ss_pred HHH----cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144 192 AQI----VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 192 a~~----~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh 267 (502)
++. .|+ +++.+|+++ + .+|+++|+++|++++ .+|+++.+ |++|.++|+++|+++|+++|+|++
T Consensus 171 ~~~~~~~~G~---~~~~v~~~~--~-~~d~~~l~~~i~~~t------~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~i 237 (447)
T PRK00451 171 LKTYLKGQGI---EVVEVPYED--G-VTDLEALEAAVDDDT------AAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFI 237 (447)
T ss_pred HHHHHHhCCc---EEEEecCCC--C-CCCHHHHHHhcCCCe------EEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEE
Confidence 665 578 999999875 4 899999999996544 37777777 789999999999999999999999
Q ss_pred e--ecccccccccCccchhhhcCCCCCCeeEEccCCc-----CCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCC
Q 037144 268 V--DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKW-----LFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEP 340 (502)
Q Consensus 268 V--DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~-----l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 340 (502)
| |... .+.+..+ .. .++|+++.+.||| +++| ++|++++++.. .. .+. +.+.........
T Consensus 238 v~~d~~~-~g~~~~~--~~-----~~~D~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~~-~~-~~~---~~~~g~~~~~~~ 303 (447)
T PRK00451 238 VGVDPVS-LGLLKPP--GE-----YGADIVVGEGQPLGIPLSFGGP-YLGFFATRKKL-VR-QMP---GRLVGETVDADG 303 (447)
T ss_pred EEcChHH-hccCCCc--cc-----CCCCEEEECCCcCCCCCCCCCC-CchHHHhhHHH-Hh-hCC---CCEeeeecccCC
Confidence 8 6443 2222212 11 2899999999997 4445 78888876532 22 111 111000000000
Q ss_pred c----------ccccCCCccccc-CCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCee
Q 037144 341 K----------EQEVGYKDWQIT-LCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFS 408 (502)
Q Consensus 341 ~----------~~~~~~~~~~~~-~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~ 408 (502)
. .........+.. +++. ..+++.+.+++.++.+|++++.++..++++++.+.|+++++++++..+.+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 383 (447)
T PRK00451 304 KRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPFFN 383 (447)
T ss_pred CeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCeEE
Confidence 0 000000000000 0000 011344445677899999999999999999999999999899987333334
Q ss_pred EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEE-EEeeeE--CCEEEEEEEecCCCCcH
Q 037144 409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVF-MTHAIV--GGIYVLRFAAGNSMTME 485 (502)
Q Consensus 409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~~--~g~~~lR~~~~~~~t~~ 485 (502)
.+++.+... ..++.++|.++|.+. +....+ ....++|++++. .+++
T Consensus 384 ~~~v~~~~~------------------------------~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~-~~t~ 432 (447)
T PRK00451 384 EFVVRLPKP------------------------------AEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTE-KRTK 432 (447)
T ss_pred EEEEecCCC------------------------------HHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCC-CCCH
Confidence 444544211 245677777777641 111111 113589999864 4677
Q ss_pred HHHHHHHHHHHHHH
Q 037144 486 SHVRAAWTVVQEHL 499 (502)
Q Consensus 486 ~di~~~~~~l~~~~ 499 (502)
++|++++++|+++.
T Consensus 433 e~i~~l~~~L~~~~ 446 (447)
T PRK00451 433 EDIDALVAALGEVL 446 (447)
T ss_pred HHHHHHHHHHHHHh
Confidence 79999999998764
No 26
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=2.2e-28 Score=251.33 Aligned_cols=358 Identities=15% Similarity=0.105 Sum_probs=243.8
Q ss_pred CcccccCCCCCCHHHHHHHHHHhhcCCC-----CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchH
Q 037144 77 PNYFAYFPATSSVAGIVGEMLSSGFNVV-----GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCE 151 (502)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~~~~n~~-----~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~ 151 (502)
..||++...++.+.. +.+.+..++... ...+..+....+...++++.+++++|.++. ..+++|+|+|+
T Consensus 20 ~~yld~a~~~~~~~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~------~~i~~~~~~t~ 92 (401)
T PRK10874 20 GVYLDSAATALKPQA-VIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDA------KNIVWTRGTTE 92 (401)
T ss_pred eEEEeCCcccCCCHH-HHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCC------CEEEEECCHHH
Confidence 358888776665444 444444444221 122333455667777899999999999422 16889999999
Q ss_pred HHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHH
Q 037144 152 ALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLD 227 (502)
Q Consensus 152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~ 227 (502)
++..++........ .+++.|++++..|++ +.+.++..|+ +++.+|++. ++.+|+++++++++++
T Consensus 93 ~i~~~~~~~~~~~~-------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~i~~~ 160 (401)
T PRK10874 93 SINLVAQSYARPRL-------QPGDEIIVSEAEHHANLVPWLMVAQQTGA---KVVKLPLGA--DRLPDVDLLPELITPR 160 (401)
T ss_pred HHHHHHHHhhhccC-------CCcCEEEECCcchHHHHHHHHHHHHHhCC---EEEEEecCC--CCcCCHHHHHHhcCcC
Confidence 88666554421000 156789999999976 5567788899 999999875 4689999999999765
Q ss_pred HhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC
Q 037144 228 VEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL 307 (502)
Q Consensus 228 ~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~ 307 (502)
+ .+|++++++|+||.+.|+++|+++|+++|++++||++|+.+..+.+- .. + ++|++++++||+ ++|.
T Consensus 161 t------~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~-~~----~-~~d~~~~s~~K~-~gp~ 227 (401)
T PRK10874 161 T------RILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADV-QA----L-DIDFYAFSGHKL-YGPT 227 (401)
T ss_pred c------EEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCc-hh----c-CCCEEEEecccc-cCCC
Confidence 4 38889999999999999999999999999999999999766554331 11 1 689999999995 4688
Q ss_pred cceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCC--CcccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHH
Q 037144 308 DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGY--KDWQITLCRR--FRSLKLWVVIRNFGVANLRNFIRSHV 383 (502)
Q Consensus 308 ~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~--~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~ 383 (502)
|+|++++++. .+. .+ .++..............+.+ ..+.++.+.+ ...+++..++..+...|+.+..++..
T Consensus 228 G~G~l~~~~~-~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~ 302 (401)
T PRK10874 228 GIGVLYGKSE-LLE-AM---SPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSR 302 (401)
T ss_pred ccEEEEEchH-HHh-cC---CCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 9999987654 222 11 12221100000000000000 1112222222 13456777777777778888888999
Q ss_pred HHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE
Q 037144 384 GMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM 463 (502)
Q Consensus 384 ~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 463 (502)
++++++.+.|+++|+++++.++..++++|.+.+.. ..++.+.|.++|.++.
T Consensus 303 ~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~~-----------------------------~~~~~~~L~~~gI~v~ 353 (401)
T PRK10874 303 SLATLAEDALAKLPGFRSFRCQDSSLLAFDFAGVH-----------------------------HSDLVTLLAEYGIALR 353 (401)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCcC-----------------------------HHHHHHHHHHCCcEEe
Confidence 99999999999999999887777788888764321 2356667777787554
Q ss_pred EeeeE--------CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 464 THAIV--------GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 464 ~~~~~--------~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
++... +..+++|+|++.+ ++++||++++++|+++++.
T Consensus 354 ~g~~~~~~~~~~~g~~~~iRiS~~~~-nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 354 AGQHCAQPLLAALGVTGTLRASFAPY-NTQSDVDALVNAVDRALEL 398 (401)
T ss_pred ccccchHHHHHHhCCCCEEEEEeccc-CCHHHHHHHHHHHHHHHHH
Confidence 43221 2246899999755 6778999999999988764
No 27
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.97 E-value=2.5e-28 Score=251.26 Aligned_cols=358 Identities=16% Similarity=0.115 Sum_probs=239.9
Q ss_pred cccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144 78 NYFAYFPATSSVAGIVGEMLSSGF-----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA 152 (502)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a 152 (502)
.||++-..++.+.. +.+.+...+ |+....+..++.......++++.+++++|.++.. .+++|+|+|++
T Consensus 20 ~yld~~~~~~~p~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~------~v~~~~g~t~~ 92 (403)
T TIGR01979 20 VYLDSAATSQKPQQ-VIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDE------EIVFTRGTTES 92 (403)
T ss_pred EEEeCccccCCCHH-HHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCC------eEEEeCCHHHH
Confidence 56777655554443 445554443 2222223334445556668889999999997321 68999999998
Q ss_pred HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH
Q 037144 153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV 228 (502)
Q Consensus 153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~ 228 (502)
+..++.+......+ +++.|+++...|++ +.++++..|+ +++.+|+++ ++.+|+++|+++++++
T Consensus 93 l~~~~~~~~~~~~~-------~g~~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~v~~~~--~~~~~~~~l~~~i~~~- 159 (403)
T TIGR01979 93 INLVAYSWGDSNLK-------AGDEIVISEMEHHANIVPWQLLAERTGA---TLKFIPLDD--DGTLDLDDLEKLLTEK- 159 (403)
T ss_pred HHHHHHHhhhhcCC-------CCCEEEECcchhhHHHHHHHHHHHhcCc---EEEEEecCC--CCCCCHHHHHHHhccC-
Confidence 76655543221111 56789999999876 3466778899 999999984 4689999999998654
Q ss_pred hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc
Q 037144 229 EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD 308 (502)
Q Consensus 229 ~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~ 308 (502)
+.+|++++++|++|.+.|+++|+++|+++|+++|||++|+.+..+.+- .. .++|++++++||++ +|.|
T Consensus 160 -----~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~-~~-----~~~d~~~~s~~K~~-gp~G 227 (403)
T TIGR01979 160 -----TKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDV-QA-----LDCDFYVFSGHKMY-GPTG 227 (403)
T ss_pred -----CeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCc-cc-----cCCCEEEEeccccc-CCCC
Confidence 348889999999999999999999999999999999999877654321 11 16899999999976 5889
Q ss_pred ceEEEeeCchhhhhhhcCCcccccCccCCC-C-CcccccCCCcccccCCCC-C-CchHHHHHHHHhcHHHHHHHHHHHHH
Q 037144 309 CCCLWVKDPSCLLSTLSTNPQYLKNEATDQ-E-PKEQEVGYKDWQITLCRR-F-RSLKLWVVIRNFGVANLRNFIRSHVG 384 (502)
Q Consensus 309 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~-~-~~~~~~~~~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~~~~~ 384 (502)
+|++++++. .+. .+ .++........ . .....+....+.++.+.+ . ..++++.+++.+...|++++.++..+
T Consensus 228 ~g~l~~~~~-~~~-~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~ 302 (403)
T TIGR01979 228 IGVLYGKEE-LLE-QM---PPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHE 302 (403)
T ss_pred ceEEEEchH-HHh-cC---CCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 999988754 221 11 11211110000 0 000000001112222222 1 23566777877766688889999999
Q ss_pred HHHHHHHHHhcCCCeEEecCC----CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCc
Q 037144 385 MAKLFERLVTSDKRFEVAFPR----NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGK 460 (502)
Q Consensus 385 la~~l~~~l~~~~~~~l~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 460 (502)
+++++.+.|+++++++++.++ ..++++|.+.+.. ..++.+.|.+.|+
T Consensus 303 l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~-----------------------------~~~~~~~L~~~gI 353 (403)
T TIGR01979 303 LTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVH-----------------------------PHDVGTILDEEGI 353 (403)
T ss_pred HHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcC-----------------------------HHHHHHHHhhCCE
Confidence 999999999999999998653 3678888874321 2345566666775
Q ss_pred EEEEee--------eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144 461 VFMTHA--------IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF 502 (502)
Q Consensus 461 ~~~~~~--------~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~ 502 (502)
..-++. .+...+++|+|++ +.++++||++++++|+++.+.|
T Consensus 354 ~v~~g~~~~~~~~~~~~~~~~iRiS~~-~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 354 AVRSGHHCAQPLMRRFGVPATCRASFY-IYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred EEcchhhhhHHHHHHhCCCCEEEEEec-cCCCHHHHHHHHHHHHHHHHHh
Confidence 432211 1122468999986 6678889999999999987654
No 28
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=2.2e-28 Score=251.14 Aligned_cols=357 Identities=14% Similarity=0.068 Sum_probs=241.6
Q ss_pred cccccCCCCCCHHHHHHHHHHhhcCC---C--CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144 78 NYFAYFPATSSVAGIVGEMLSSGFNV---V--GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA 152 (502)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~n~---~--~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a 152 (502)
.||++-..++.+. .+.+.+..+++. + ...+..++...+...++++.+++++|.++.. ..++|+|+|++
T Consensus 18 iyld~a~~~~~p~-~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~------~i~~t~g~t~~ 90 (398)
T TIGR03392 18 VYLDSAATALKPQ-AVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAE------NIVWTRGTTES 90 (398)
T ss_pred EEeeCccccCCCH-HHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCC------eEEEeCChHHH
Confidence 5888876665444 455555554421 1 1223334455666778999999999985321 68999999999
Q ss_pred HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH
Q 037144 153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV 228 (502)
Q Consensus 153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~ 228 (502)
+..++.+...... .+++.|++++..|++ +...++..|+ +++.+|++. ++.+|+++|++++++++
T Consensus 91 l~~~~~~~~~~~~-------~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~--~~~~~~~~l~~~i~~~t 158 (398)
T TIGR03392 91 INLVAQSYARPRL-------QPGDEIIVSEAEHHANLIPWLMVAQQTGA---KVVKLPIGA--DLLPDIRQLPELLTPRT 158 (398)
T ss_pred HHHHHHHhhhccC-------CCCCEEEECCcchhHHHHHHHHHHHHcCc---EEEEEecCC--CCCcCHHHHHHHhccCc
Confidence 8776655421000 156789999999976 4556788899 999999975 46899999999997654
Q ss_pred hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc
Q 037144 229 EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD 308 (502)
Q Consensus 229 ~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~ 308 (502)
.+|+++++++++|.+.|+++|+++|+++|++++||++|+.+....+. .. + ++|++++++||++ +|.|
T Consensus 159 ------~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~-~~----~-~~d~~~~s~~K~~-gp~G 225 (398)
T TIGR03392 159 ------RILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDV-QA----L-DIDFYAFSGHKLY-GPTG 225 (398)
T ss_pred ------eEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCCh-hh----c-CCCEEEEeccccc-CCCc
Confidence 37888999999999999999999999999999999999766554321 11 1 6899999999955 5788
Q ss_pred ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCC--CcccccCCCCC--CchHHHHHHHHhcHHHHHHHHHHHHH
Q 037144 309 CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGY--KDWQITLCRRF--RSLKLWVVIRNFGVANLRNFIRSHVG 384 (502)
Q Consensus 309 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~--~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~ 384 (502)
+|++++++. .+. .+ .++..............+.+ ....++.+.+. ..+++..+++.+...|+.++.++..+
T Consensus 226 ~G~l~~~~~-~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~ 300 (398)
T TIGR03392 226 IGVLYGKTE-LLE-AM---PPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVS 300 (398)
T ss_pred eEEEEEcHH-HHh-hC---CCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 999987644 222 11 12221110000000000000 01122222221 33577778877767788888899999
Q ss_pred HHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE
Q 037144 385 MAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT 464 (502)
Q Consensus 385 la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 464 (502)
+++++.+.|+++|++++..++..++++|.+.+.. ...+.+.|.++|+.+.+
T Consensus 301 l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~-----------------------------~~~l~~~L~~~gI~v~~ 351 (398)
T TIGR03392 301 LADLAEERLAQLPGFRSFRCPGSSLLAFDFAGVH-----------------------------HSDLAALLAESGIALRA 351 (398)
T ss_pred HHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCcC-----------------------------HHHHHHHHHhCCEEEec
Confidence 9999999999999999886666778888764321 23566667667764433
Q ss_pred eeeE--------CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 465 HAIV--------GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 465 ~~~~--------~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+... +..+++|+|++ +.++++||++++++|+++++.
T Consensus 352 g~~~~~~~~~~~g~~~~iRvS~~-~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 352 GQHCAQPLMAALGVSGTLRASFA-PYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred CccchHHHHHHhCCCCEEEEEee-ccCCHHHHHHHHHHHHHHHHH
Confidence 2211 12468999986 457788999999999988764
No 29
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=1.9e-28 Score=249.59 Aligned_cols=349 Identities=14% Similarity=0.111 Sum_probs=235.5
Q ss_pred ccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144 79 YFAYFPATSSVAGIVGEMLSSGF-----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL 153 (502)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~ 153 (502)
||++-..++.++..+. .+...+ |+....+..++.......++++++++++|.+... .+++|+|+|+++
T Consensus 2 yl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~------~v~~~~g~t~a~ 74 (373)
T cd06453 2 YLDNAATSQKPQPVID-AIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPD------EIIFTRNTTEAI 74 (373)
T ss_pred cccCccccCCCHHHHH-HHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCC------eEEEeCCHHHHH
Confidence 4555544444444443 333332 2222344556677788888999999999987321 588999999998
Q ss_pred HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH----HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh
Q 037144 154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF----QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE 229 (502)
Q Consensus 154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~----~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~ 229 (502)
..++.+.... ..+++.|+++...|++. ...++..|+ +++.|+++. ++.+|+++|++++.++
T Consensus 75 ~~~~~~l~~~--------~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~-- 139 (373)
T cd06453 75 NLVAYGLGRA--------NKPGDEIVTSVMEHHSNIVPWQQLAERTGA---KLKVVPVDD--DGQLDLEALEKLLTER-- 139 (373)
T ss_pred HHHHHHhhhc--------CCCCCEEEECcchhHHHHHHHHHHHhhcCc---EEEEeecCC--CCCcCHHHHHHHhcCC--
Confidence 7777665431 01456788999999884 445667898 999999874 5689999999999753
Q ss_pred cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc
Q 037144 230 AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC 309 (502)
Q Consensus 230 ~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~ 309 (502)
+.+|++++++|++|.+.|+++|+++|+++|+|+|+|++++.+..+.+ ... .++|++++++|||++. .++
T Consensus 140 ----~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~-----~~~d~~~~s~~K~~~~-~g~ 208 (373)
T cd06453 140 ----TKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVD-VQD-----LGCDFLAFSGHKMLGP-TGI 208 (373)
T ss_pred ----ceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeee-ccc-----cCCCEEEeccccccCC-CCc
Confidence 34888999999999999999999999999999999999977655432 111 1789999999999987 678
Q ss_pred eEEEeeCchhhhhhhcCCcccccCccCCCC--CcccccCCCcccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHH
Q 037144 310 CCLWVKDPSCLLSTLSTNPQYLKNEATDQE--PKEQEVGYKDWQITLCRR--FRSLKLWVVIRNFGVANLRNFIRSHVGM 385 (502)
Q Consensus 310 g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~--~~~~~~~~~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~~l 385 (502)
|++++++. .+. .+. .+......... .....+......+..+.+ ...+++|.+++.+..+|++++.++..++
T Consensus 209 g~~~~~~~-~~~-~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~ 283 (373)
T cd06453 209 GVLYGKEE-LLE-EMP---PYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHEL 283 (373)
T ss_pred EEEEEchH-Hhh-cCC---CeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 98887654 222 111 12111000000 000000000111111111 2346788889888888999999999999
Q ss_pred HHHHHHHHhcCCCeEEecCC--CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE
Q 037144 386 AKLFERLVTSDKRFEVAFPR--NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM 463 (502)
Q Consensus 386 a~~l~~~l~~~~~~~l~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 463 (502)
++++.+.|+++++++++.++ ..++++|...... ..++.+.|.+.|..+.
T Consensus 284 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~i~~~l~~~gi~i~ 334 (373)
T cd06453 284 TAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGIH-----------------------------PHDVATILDQYGIAVR 334 (373)
T ss_pred HHHHHHHHhcCCCeEEeCCccccCCeEEEEECCcC-----------------------------HHHHHHHHHHCCEEec
Confidence 99999999999999988532 4567888764211 2356777777776432
Q ss_pred Eeee--------ECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144 464 THAI--------VGGIYVLRFAAGNSMTMESHVRAAWTVV 495 (502)
Q Consensus 464 ~~~~--------~~g~~~lR~~~~~~~t~~~di~~~~~~l 495 (502)
++.. .+...++|+|++ +.++++|||+++++|
T Consensus 335 ~g~~~~~~~~~~~~~~~~iRis~~-~~~t~~di~~~~~~l 373 (373)
T cd06453 335 AGHHCAQPLMRRLGVPGTVRASFG-LYNTEEEIDALVEAL 373 (373)
T ss_pred cCccchhHHHHHhCCCCeEEEEec-CCCCHHHHHHHHhhC
Confidence 2211 112468999986 557788999999864
No 30
>PLN02651 cysteine desulfurase
Probab=99.97 E-value=1.7e-28 Score=248.76 Aligned_cols=287 Identities=10% Similarity=0.052 Sum_probs=203.3
Q ss_pred ccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144 79 YFAYFPATSSVAGIVGEMLSSGF-----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL 153 (502)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~ 153 (502)
||++...++.++.++. .+...+ |+....+..++.+.++.+++++.+++++|.+++ ..+||+|+|+++
T Consensus 2 Yld~a~~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~v~~t~~~t~a~ 73 (364)
T PLN02651 2 YLDMQATTPIDPRVLD-AMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK-------EIIFTSGATESN 73 (364)
T ss_pred cccCcCCCCCCHHHHH-HHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHHHH
Confidence 5666655555555443 333322 111112223455677777899999999998754 589999999999
Q ss_pred HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH---HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc
Q 037144 154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ---IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA 230 (502)
Q Consensus 154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~---~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~ 230 (502)
..++..+.....+ +++.|+++...|+++..... ..|+ +++.+|+++ ++.+|+++|+++|++++
T Consensus 74 ~~~l~~~~~~~~~-------~g~~vl~~~~~h~s~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~i~~~t-- 139 (364)
T PLN02651 74 NLAIKGVMHFYKD-------KKKHVITTQTEHKCVLDSCRHLQQEGF---EVTYLPVKS--DGLVDLDELAAAIRPDT-- 139 (364)
T ss_pred HHHHHHHHHhccC-------CCCEEEEcccccHHHHHHHHHHHhcCC---EEEEEccCC--CCcCCHHHHHHhcCCCc--
Confidence 8888776543211 56788999999998765543 4577 899999875 46899999999997654
Q ss_pred CCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcce
Q 037144 231 ELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCC 310 (502)
Q Consensus 231 g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g 310 (502)
.+|+++++++++|.+.|+++|+++|+++|+++|||++++.+.++++-.+ . ++|++++++||| ++|.|+|
T Consensus 140 ----~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~-~-----~~D~~~~s~hK~-~gp~G~g 208 (364)
T PLN02651 140 ----ALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDD-L-----GVDLMSISGHKI-YGPKGVG 208 (364)
T ss_pred ----EEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCccc-C-----CCCEEEechhhh-CCCCceE
Confidence 3889999999999999999999999999999999999998877665221 1 799999999998 6899999
Q ss_pred EEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc-cCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 037144 311 CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI-TLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKL 388 (502)
Q Consensus 311 ~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~-~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~ 388 (502)
+++++++... ...+.+.... .. ... .++... ..+++..+++.+.. +.+++.++..+++++
T Consensus 209 ~l~v~~~~~~----~l~p~~~g~~-~~------------~~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~ 270 (364)
T PLN02651 209 ALYVRRRPRV----RLEPLMSGGG-QE------------RGRRSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRER 270 (364)
T ss_pred EEEEcCCCCC----CCCccccCCC-cc------------CCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHH
Confidence 9999875321 1112111110 00 001 112221 23566677777643 458888999999999
Q ss_pred HHHHHhc-CCCeEEecC--CC---eeEEEEEeec
Q 037144 389 FERLVTS-DKRFEVAFP--RN---FSLVCFRVTP 416 (502)
Q Consensus 389 l~~~l~~-~~~~~l~~~--~~---~~~v~f~~~~ 416 (502)
+.+.|++ +|+++++.+ +. .++++|.+..
T Consensus 271 l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~ 304 (364)
T PLN02651 271 LLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAY 304 (364)
T ss_pred HHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCC
Confidence 9999985 689999875 22 3588888753
No 31
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.97 E-value=7.2e-28 Score=244.63 Aligned_cols=308 Identities=15% Similarity=0.132 Sum_probs=212.6
Q ss_pred CCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHh-hcC------------CCCcccccChh
Q 037144 47 ESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSS-GFN------------VVGLDWISSPA 113 (502)
Q Consensus 47 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~-~~n------------~~~~~~~~~p~ 113 (502)
..+|++|.+.+.|...|.++-.-..++|. +.+--+---.-+...++.. .++ ..+..-..++.
T Consensus 28 ~~~p~~g~~~~~i~~~l~~l~~~~~~~~~-----~~~~~gere~rv~~~~~~~~~~~~~hgigr~~~l~~~q~ka~gss~ 102 (444)
T TIGR03531 28 RKIPEEGWDDETIELFLHELSVMDTNNFP-----NNVGVGEREGRVFSKLVARRHYRFCHGIGRSGDLVAPQPKAAGSSL 102 (444)
T ss_pred CcCCccCCCHHHHHHHHHHHhcCCcCCCc-----cccCcCcccceeechhhhhcccceecCCCCcccccccCccccCccH
Confidence 46899999999888888876443334443 1111000000000111110 011 01112224556
Q ss_pred hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCch-HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH
Q 037144 114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTC-EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA 192 (502)
Q Consensus 114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt-~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa 192 (502)
...+.+++..++++++|.+... .++++++|| +++.+++.+++.+ +.++..|+++..+|.|+.+++
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~------~a~~v~~~Tg~al~laL~alr~~--------~~~gd~VI~p~~th~S~~kAi 168 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIK------SAFVVPLATGMSLSLCLSALRHK--------RPKAKYVIWPRIDQKSCIKAI 168 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCC------EEEEECCHHHHHHHHHHHHcCCc--------CCCCCEEEEECcChHHHHHHH
Confidence 7889999999999999997431 478899999 7888888777642 012456677778999999999
Q ss_pred HHcCCCCCCEEEEecC-CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecc
Q 037144 193 QIVGIDRKNIRAIKTT-KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 271 (502)
Q Consensus 193 ~~~Glg~~~v~~v~~~-~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA 271 (502)
.++|+ +++.|++. +++++.||+++|+++|++... ..+.+|+.+.+++..|..||+++|+++|++||+|+|||+|
T Consensus 169 ~~~G~---~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~--kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaA 243 (444)
T TIGR03531 169 STAGF---EPRVIETVLDGDELTTDVEDIERAIEEIGP--DNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNA 243 (444)
T ss_pred HHcCC---eEEEeeeeecCcCCCcCHHHHHHHHHhccC--CCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECc
Confidence 99999 99999952 234699999999999985321 2345566566666778999999999999999999999999
Q ss_pred cccccccCccchhhh-cCC--CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCC
Q 037144 272 YAGSACICPEFRHFI-DGV--ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYK 348 (502)
Q Consensus 272 ~g~~~~~~~~~~~~~-~~~--~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 348 (502)
||... +...+.. .++ .++|++++++||++++|.++|+++++++..... +.. .|....
T Consensus 244 yg~~~---~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~-i~~--~y~g~~-------------- 303 (444)
T TIGR03531 244 YGLQS---NKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQE-ISK--SYPGRA-------------- 303 (444)
T ss_pred CcCcC---hhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHH-HHH--hccCCC--------------
Confidence 98643 2222222 232 258999999999999999999998988876542 221 121100
Q ss_pred cccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCC
Q 037144 349 DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK---RFEVAFPR 405 (502)
Q Consensus 349 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---~~~l~~~~ 405 (502)
....++.+|+++..+|.+++++++++..++++++.+.|+++. |.+++..|
T Consensus 304 -------~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~ 356 (444)
T TIGR03531 304 -------SASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTP 356 (444)
T ss_pred -------CChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCC
Confidence 012457899999999999999999999999999999997642 45666433
No 32
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.97 E-value=2.4e-28 Score=250.87 Aligned_cols=345 Identities=13% Similarity=0.108 Sum_probs=226.3
Q ss_pred CcccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchH
Q 037144 77 PNYFAYFPATSSVAGIVGEMLSSGF-----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCE 151 (502)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~ 151 (502)
+.||++...++.++.++ +.+...+ |+....+..+.......+++++.+++++|.+++ ..+|++|+|+
T Consensus 4 ~~yld~aa~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~v~~~~g~t~ 75 (402)
T TIGR02006 4 PIYLDYAATTPVDPRVA-EKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-------EIVFTSGATE 75 (402)
T ss_pred cEEeeCCcCCCCCHHHH-HHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHH
Confidence 46888877666666554 4433333 111111112222345666788999999998754 5899999999
Q ss_pred HHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH---HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH
Q 037144 152 ALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ---IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV 228 (502)
Q Consensus 152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~---~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~ 228 (502)
++..++........+ ++++|+++..+|.++..++. ..|+ +++.||+++ ++.+|+++|++++++.+
T Consensus 76 a~~~~l~~l~~~~~~-------~g~~Vi~~~~~h~s~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~l~~~~ 143 (402)
T TIGR02006 76 SNNLAIKGIAHFYKS-------KGNHIITSKTEHKAVLDTCRYLEREGF---EVTYLPPKS--NGLIDLEELKAAIRDDT 143 (402)
T ss_pred HHHHHHHHHHHhhcC-------CCCEEEECCCccHHHHHHHHHHHhcCC---EEEEEccCC--CCcCCHHHHHHhcCCCC
Confidence 998877665431111 56788999999998776654 3488 999999875 46899999999986543
Q ss_pred hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc
Q 037144 229 EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD 308 (502)
Q Consensus 229 ~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~ 308 (502)
.+|++++++|++|.+.|+++|.++|+++|+|+|||++++.+..+.+-. . .++|++++++||++ +|.|
T Consensus 144 ------~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~-~-----~~~D~~~~s~~K~~-gp~G 210 (402)
T TIGR02006 144 ------ILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVN-E-----LKVDLMSISGHKIY-GPKG 210 (402)
T ss_pred ------EEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCcc-c-----cCCCEEEEehhhhc-CCCc
Confidence 488899999999999999999999999999999999998877654321 1 17999999999975 5999
Q ss_pred ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC-C-CCchHHHHHHHHhcHHHHHHHHHHHHHHH
Q 037144 309 CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR-R-FRSLKLWVVIRNFGVANLRNFIRSHVGMA 386 (502)
Q Consensus 309 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr-~-~~al~~~~~l~~~g~~g~~~~~~~~~~la 386 (502)
+|+++++++.... ..+ ........ ..++.+. . ...+.+..+++.+ .++++++.++..+++
T Consensus 211 ~G~l~~~~~~~~~----~~~-~~~g~~~~------------~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~ 272 (402)
T TIGR02006 211 IGALYVRRKPRVR----LEA-LIHGGGHE------------RGMRSGTLPTHQIVGMGEAFRIA-KEEMAQDTAHVLALR 272 (402)
T ss_pred eEEEEEccCCCCC----CCc-eecCCCcc------------CCccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHH
Confidence 9999998653211 111 11110000 0111111 1 1223444556554 457888889999999
Q ss_pred HHHHHHHhcCCCeEEecCC--Ce-e--EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE
Q 037144 387 KLFERLVTSDKRFEVAFPR--NF-S--LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV 461 (502)
Q Consensus 387 ~~l~~~l~~~~~~~l~~~~--~~-~--~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 461 (502)
+++++.|++++++++..++ .. . +++|...+. +.+...+.+.....|..
T Consensus 273 ~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~~---------------------------~~~~~~l~~i~v~~G~~ 325 (402)
T TIGR02006 273 DRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVEG---------------------------ESLIMALKDLAVSSGSA 325 (402)
T ss_pred HHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCcCH---------------------------HHHHHhcCCEEEechhh
Confidence 9999999999999887532 22 2 345542110 11222221111112222
Q ss_pred EEEeeeE--------------CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 462 FMTHAIV--------------GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 462 ~~~~~~~--------------~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+++... ...+++|+|+. +.||++|||++++.|+++.+.
T Consensus 326 -c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~-~~~t~edid~l~~~l~~~~~~ 377 (402)
T TIGR02006 326 -CTSASLEPSYVLRALGINDELAHSSIRFTIG-RFTTEEEIDYAVKLVKSAIDK 377 (402)
T ss_pred -cCCCCCCccHHHHHcCCChhhcCceEEEEec-CCCCHHHHHHHHHHHHHHHHH
Confidence 222110 11368999996 558888999999999988753
No 33
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.96 E-value=9.1e-28 Score=242.93 Aligned_cols=342 Identities=14% Similarity=0.069 Sum_probs=233.5
Q ss_pred ccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHH
Q 037144 81 AYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAA 160 (502)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a 160 (502)
.|.+++...+..+.+.+...+. . ..++...++.+++++++++++|.+... ..++++|||+++..++.+.
T Consensus 2 ~~~~~~~~~~~~v~~a~~~~~~----~-~~~~~~~~~~~~~~~~la~~~g~~~~~------~~~~~~~~t~al~~~~~~~ 70 (356)
T cd06451 2 LLIPGPSNVPPRVLKAMNRPML----G-HRSPEFLALMDEILEGLRYVFQTENGL------TFLLSGSGTGAMEAALSNL 70 (356)
T ss_pred cccCCCcCCCHHHHHHhCCCcc----C-CCCHHHHHHHHHHHHHHHHHhcCCCCC------EEEEecCcHHHHHHHHHHh
Confidence 3455666666666666654321 1 235667778889999999999995432 4788999999987777654
Q ss_pred HHHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHH-HHhcCCccEEE
Q 037144 161 RDRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINL-DVEAELIPLFL 237 (502)
Q Consensus 161 ~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~-~~~~g~~p~~V 237 (502)
.. +++.|+++...|++ +...++..|+ +++.+|+++ ++.+|++++++.+++ + |.+|
T Consensus 71 ~~-----------~g~~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~~~~~l~~~i~~~~------~~~v 128 (356)
T cd06451 71 LE-----------PGDKVLVGVNGVFGDRWADMAERYGA---DVDVVEKPW--GEAVSPEEIAEALEQHD------IKAV 128 (356)
T ss_pred CC-----------CCCEEEEecCCchhHHHHHHHHHhCC---CeEEeecCC--CCCCCHHHHHHHHhccC------CCEE
Confidence 32 56678888778886 4567888999 999999875 368999999999975 3 3478
Q ss_pred EEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc
Q 037144 238 CATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP 317 (502)
Q Consensus 238 v~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~ 317 (502)
+++.++|++|.+.|+++|.++|+++|+++++|++|+.+..+.+... .++|.++.++|||++.|.|+|+++++++
T Consensus 129 ~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~------~~~d~~~~s~~K~l~~p~g~G~l~~~~~ 202 (356)
T cd06451 129 TLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDE------WGVDVAYTGSQKALGAPPGLGPIAFSER 202 (356)
T ss_pred EEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccccc------cCccEEEecCchhccCCCCcceeEECHH
Confidence 8889999999999999999999999999999999865543322111 1689999999999999999999998764
Q ss_pred hhhhhhhc--C-CcccccCccCCCCCcccccCCCccc-ccCCC-CC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 037144 318 SCLLSTLS--T-NPQYLKNEATDQEPKEQEVGYKDWQ-ITLCR-RF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFER 391 (502)
Q Consensus 318 ~~l~~~~~--~-~~~yl~~~~~~~~~~~~~~~~~~~~-~~~sr-~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~ 391 (502)
. ...... . ...|..... ...+.... ...+. .. ...++.++++.+...+++++.++..++++++.+
T Consensus 203 ~-~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~ 273 (356)
T cd06451 203 A-LERIKKKTKPKGFYFDLLL--------LLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALRE 273 (356)
T ss_pred H-HHHHHhcCCCCceeecHHH--------HHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 2 222221 1 111111000 00000000 01111 11 123556777777778899999999999999999
Q ss_pred HHhcCCCeEEecCC--CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeE
Q 037144 392 LVTSDKRFEVAFPR--NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIV 468 (502)
Q Consensus 392 ~l~~~~~~~l~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~ 468 (502)
.|++. ++++..++ ..+++.|...+.+. + ..++.++|.++ |+...++...
T Consensus 274 ~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-------------------------~--~~~~~~~L~~~~gI~~~~g~~~ 325 (356)
T cd06451 274 GLEAL-GLKLLAKPELRSPTVTAVLVPEGV-------------------------D--GDEVVRRLMKRYNIEIAGGLGP 325 (356)
T ss_pred HHHHc-CCeeccCcccCCCceEEEECCCCC-------------------------C--HHHHHHHHHHhCCEEEeccccc
Confidence 99987 89887543 24444433223211 0 24667777777 7643332222
Q ss_pred CCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 469 GGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 469 ~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
....++|++++. .++++||++++++|+++.
T Consensus 326 ~~~~~iRis~~~-~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 326 TAGKVFRIGHMG-EATREDVLGVLSALEEAL 355 (356)
T ss_pred ccCCEEEEecCC-CCCHHHHHHHHHHHHHHh
Confidence 223599999864 477779999999998865
No 34
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=8.8e-27 Score=241.07 Aligned_cols=357 Identities=14% Similarity=0.092 Sum_probs=237.1
Q ss_pred CcccccCCCCCCHHHHHHHHHHhhcCC---C--CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchH
Q 037144 77 PNYFAYFPATSSVAGIVGEMLSSGFNV---V--GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCE 151 (502)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~~~~n~---~--~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~ 151 (502)
..||++-..++. |..+.+.+...+.. + ...+..+........++++.+++++|.++.. ..++|+|+|+
T Consensus 33 ~iyLd~a~~~~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~------~v~~t~g~t~ 105 (424)
T PLN02855 33 LVYLDNAATSQK-PAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSR------EIVFTRNATE 105 (424)
T ss_pred eEEeeCccccCC-CHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCC------EEEEeCCHHH
Confidence 478888655544 44455555444321 2 1112223334455667889999999995321 6899999999
Q ss_pred HHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHH
Q 037144 152 ALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLD 227 (502)
Q Consensus 152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~ 227 (502)
++...+.......+ .+++.|+++...|++ +...++..|+ +++.+|++.+ +.+|+++|+++|+++
T Consensus 106 al~~i~~~~~~~~~-------~~gd~vl~~~~~~~s~~~~~~~~a~~~g~---~v~~v~~~~~--~~~~~~~l~~~i~~~ 173 (424)
T PLN02855 106 AINLVAYTWGLANL-------KPGDEVILSVAEHHSNIVPWQLVAQKTGA---VLKFVGLTPD--EVLDVEQLKELLSEK 173 (424)
T ss_pred HHHHHHHHhhhhcC-------CCcCEEEECCCccHHHHHHHHHHHHHcCC---EEEEEecCCC--CCcCHHHHHHHhccC
Confidence 97665543210000 156788899888876 4456677899 9999998753 479999999999754
Q ss_pred HhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC
Q 037144 228 VEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL 307 (502)
Q Consensus 228 ~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~ 307 (502)
+ .+|++++++|++|.+.|+++|+++|+++|++++||++|+.+..+.+ ... .++|++++++||+ ++|.
T Consensus 174 t------~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~-~~~-----~~~d~~~~s~~K~-~gp~ 240 (424)
T PLN02855 174 T------KLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVD-VQT-----LGADFLVASSHKM-CGPT 240 (424)
T ss_pred c------eEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCC-chh-----cCCCEEEeecccc-cCCC
Confidence 3 4889999999999999999999999999999999999976655443 111 1689999999995 5688
Q ss_pred cceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCC--cccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHH
Q 037144 308 DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYK--DWQITLCRR--FRSLKLWVVIRNFGVANLRNFIRSHV 383 (502)
Q Consensus 308 ~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~--~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~ 383 (502)
|+|++++++.. +. .+ .+++...............+. ...++.+.+ ...+.++.+++.+...|++++.++..
T Consensus 241 G~G~l~~~~~~-~~-~~---~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~ 315 (424)
T PLN02855 241 GIGFLWGKSDL-LE-SM---PPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEV 315 (424)
T ss_pred ccEEEEEchhh-hh-cC---CCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 99999987542 21 11 222211110000000000000 001122211 12356677777776778999999999
Q ss_pred HHHHHHHHHHhcCCCeEEecCC------CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh
Q 037144 384 GMAKLFERLVTSDKRFEVAFPR------NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV 457 (502)
Q Consensus 384 ~la~~l~~~l~~~~~~~l~~~~------~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 457 (502)
++++++++.|+++++++++.+. ..++++|.++... ..++.+.|.+
T Consensus 316 ~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~-----------------------------~~~v~~~L~~ 366 (424)
T PLN02855 316 ELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIH-----------------------------PTDLSTFLDQ 366 (424)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcC-----------------------------HHHHHHHhcc
Confidence 9999999999999999998642 3578888875321 2356677766
Q ss_pred c-CcEEEEeee---------ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 458 S-GKVFMTHAI---------VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 458 ~-g~~~~~~~~---------~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+ |+. +..+. .+-..++|+|+. +.++++||++++++|+++.+.
T Consensus 367 ~~gI~-v~~g~~c~~~~~~~~g~~~~iRiS~~-~ynt~~di~~l~~~l~~~~~~ 418 (424)
T PLN02855 367 QHGVA-IRSGHHCAQPLHRYLGVNASARASLY-FYNTKEEVDAFIHALKDTIAF 418 (424)
T ss_pred cCCEE-EechhhhhHHHHHHhCCCCeEEEEec-cCCCHHHHHHHHHHHHHHHHH
Confidence 6 653 33221 111357999985 668888999999999988753
No 35
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.96 E-value=3.4e-27 Score=239.98 Aligned_cols=344 Identities=17% Similarity=0.139 Sum_probs=234.6
Q ss_pred ccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144 79 YFAYFPATSSVAGIVGEMLSSGF-----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL 153 (502)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~ 153 (502)
||.+..+++.+.. +.+.+...+ |+....+..+....++-+++++.+++++|.+... ..+|++++|+++
T Consensus 2 Yld~~~~~~~p~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~------~v~~~~~~t~a~ 74 (371)
T PF00266_consen 2 YLDNAGTGPMPKS-VLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDE------EVVFTSNGTEAL 74 (371)
T ss_dssp EEBTSSS-B-BHH-HHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTE------EEEEESSHHHHH
T ss_pred EeeCCCccCCCHH-HHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCcccc------ccccccccchhh
Confidence 4555444444444 444444332 2222344455667778888999999999998732 689999999988
Q ss_pred HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh
Q 037144 154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE 229 (502)
Q Consensus 154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~ 229 (502)
..++...+.. .+ ++..|+++...|++.. ..++..|+ +++.+|.+. ++.+|+++++++|+++++
T Consensus 75 ~~~~~~l~~~-~~-------~g~~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~i~~~~--~~~~~~~~~~~~l~~~~~ 141 (371)
T PF00266_consen 75 NAVASSLLNP-LK-------PGDEVLVTSNEHPSNRYPWEEIAKRKGA---EVRVIPADP--GGSLDLEDLEEALNPDTR 141 (371)
T ss_dssp HHHHHHHHHH-GT-------TTCEEEEEESSHHHHHHHHHHHHHHTTE---EEEEEEEGT--TSSCSHHHHHHHHHTTES
T ss_pred hhhhhccccc-cc-------cccccccccccccccccccccccccchh---hhccccccc--cchhhhhhhhhhhccccc
Confidence 7766666432 11 5678888889998765 45557799 999999975 358999999999976544
Q ss_pred cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc
Q 037144 230 AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC 309 (502)
Q Consensus 230 ~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~ 309 (502)
+|++++.+|.+|.+.|+++|+++|+++|++++||++++.+.++.+-. .. ++|++++++|| +++|.|+
T Consensus 142 ------lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~-~~-----~~D~~~~s~~K-l~gp~G~ 208 (371)
T PF00266_consen 142 ------LVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLD-EL-----GADFLVFSSHK-LGGPPGL 208 (371)
T ss_dssp ------EEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TT-TT-----TESEEEEESTS-TTSSSTE
T ss_pred ------eEEeecccccccEEeeeceehhhhhccCCceeEechhcccccccccc-cc-----ccceeeecccc-cCCCCch
Confidence 89999999999999999999999999999999999999988876532 21 79999999999 8889999
Q ss_pred eEEEeeCchhhhhhhcCCccc--ccCccCCCCCcccccCCCcccccCCCC-C-CchHHHHHHHHhcHHHHHHHHHHHHHH
Q 037144 310 CCLWVKDPSCLLSTLSTNPQY--LKNEATDQEPKEQEVGYKDWQITLCRR-F-RSLKLWVVIRNFGVANLRNFIRSHVGM 385 (502)
Q Consensus 310 g~~~~r~~~~l~~~~~~~~~y--l~~~~~~~~~~~~~~~~~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~~~~~l 385 (502)
|+++++++.. .........+ ....... ........+.++.+.+ . ..+.+..+++.+...|++++.++..++
T Consensus 209 g~l~v~~~~~-~~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l 283 (371)
T PF00266_consen 209 GFLYVRPEAI-ERLRPAKPGGGYLDFPSLQ----EYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIREL 283 (371)
T ss_dssp EEEEEEHHHH-HHHHTSSSSSSTTTHHHHH----HHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheehhhhh-hccccccccccccccccch----hcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhH
Confidence 9999998643 2221111111 1000000 0000011112222222 1 124566778888788999999999999
Q ss_pred HHHHHHHHhcCCCeEEecC----CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE
Q 037144 386 AKLFERLVTSDKRFEVAFP----RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV 461 (502)
Q Consensus 386 a~~l~~~l~~~~~~~l~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 461 (502)
++++.+.|.++++++++.+ ...++++|.+.... ...+.+.|.++|+.
T Consensus 284 ~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----------------------------~~~~~~~L~~~~I~ 334 (371)
T PF00266_consen 284 AEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGSD-----------------------------ADDVVKYLEERGIA 334 (371)
T ss_dssp HHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTSS-----------------------------HHHHHHHHHHHTEE
T ss_pred HHHHHhhhhcCCceeEeeecccccccceEEEeecCCC-----------------------------HHHHHHHHhhcCEE
Confidence 9999999999999998763 24678899885432 24667777777754
Q ss_pred EEEeeeEC---------CEEEEEEEecCCCCcHHHHHHH
Q 037144 462 FMTHAIVG---------GIYVLRFAAGNSMTMESHVRAA 491 (502)
Q Consensus 462 ~~~~~~~~---------g~~~lR~~~~~~~t~~~di~~~ 491 (502)
+ ..+... -.+++|+|+. +.++++|||+|
T Consensus 335 ~-~~G~~~~~~~~~~~~~~~~iRvS~~-~~nt~~dv~~l 371 (371)
T PF00266_consen 335 V-STGSACAGPSLDILGMGGVIRVSLH-YYNTEEDVDRL 371 (371)
T ss_dssp E-EESTTTCHHHHHHHHTTTEEEEE-G-TTSSHHHHHHH
T ss_pred E-eccCcccHHHHHHhCCCCEEEEecc-CCCCHHHHhhC
Confidence 3 332211 1268999975 66778899986
No 36
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.96 E-value=2.1e-26 Score=235.14 Aligned_cols=342 Identities=15% Similarity=0.153 Sum_probs=222.6
Q ss_pred ccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHhcCC-CCccCcCCCCcEEEcCCchHH
Q 037144 79 YFAYFPATSSVAGIVGEMLSSGF-----NVVGLDWISSPAAVELENIVMDWLGQMLDL-PKSFLFSGNGGGVIQGTTCEA 152 (502)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~-~~~~~~~~~~~g~~t~ggt~a 152 (502)
||++-.+++.++. +.+.+..++ |+........+....+++.. ..+.+.+|. +.+ ..++|+|+|++
T Consensus 2 yld~aa~~~~~~~-v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~-~~~~~~~~~~~~~-------~i~~t~g~tea 72 (382)
T TIGR03403 2 YLDNNATTMLDPK-VKELMDPFFCDIYGNPNSLHQFGTATHPAIAEAL-DKLYKGINARDLD-------DIIITSCATES 72 (382)
T ss_pred cccCcCCCCCCHH-HHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHH-HHHHHHcCcCCCC-------eEEEeCCHHHH
Confidence 5666555554443 555544433 22211111112334555444 444556676 332 68999999999
Q ss_pred HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH---HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh
Q 037144 153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA---QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE 229 (502)
Q Consensus 153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa---~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~ 229 (502)
+..++.......+.+ .++..|+++...|+++.... +..|+ +++.||+++ ++.+|+++|++++++++
T Consensus 73 l~~~~~~~~~~~~~~-----~~~~~vi~~~~e~ps~~~~~~~~~~~G~---~v~~v~~~~--~g~~d~~~l~~~i~~~t- 141 (382)
T TIGR03403 73 NNWVLKGVYFDEILK-----GGKNHIITTEVEHPAVRATCAFLESLGV---EVTYLPINE--QGTITAEQVREAITEKT- 141 (382)
T ss_pred HHHHHHHHHHhhccc-----CCCCEEEEcCCccHHHHHHHHHHHHCCC---EEEEEecCC--CCCCCHHHHHHhcccCC-
Confidence 987776542111100 03467888988998876654 45688 999999975 46899999999987644
Q ss_pred cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc
Q 037144 230 AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC 309 (502)
Q Consensus 230 ~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~ 309 (502)
.+|++++++|++|.+.|+++|.++|+++|+++|||++++.+..+.+... .++|++++++|||+ +|.|+
T Consensus 142 -----~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~------~~~D~~~~s~~K~~-gp~G~ 209 (382)
T TIGR03403 142 -----ALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQK------AGVDFLSFSAHKFH-GPKGV 209 (382)
T ss_pred -----eEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCccc------cCCCEEEEcchhhC-CCCce
Confidence 3788899999999999999999999999999999999987765543221 17999999999985 68899
Q ss_pred eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCc-hHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 037144 310 CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRS-LKLWVVIRNFGVANLRNFIRSHVGMAKL 388 (502)
Q Consensus 310 g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~la~~ 388 (502)
|++++|+...+ .+ .+...... . ... .++-...+ +++..+++.. .+.++...++...++++
T Consensus 210 g~l~vr~~~~~------~p-~~~g~~~~-----~--~~~----~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~ 270 (382)
T TIGR03403 210 GGLYIRKGVEL------TP-LFHGGEHM-----G--GRR----SGTLNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDR 270 (382)
T ss_pred EEEEECCCCCC------CC-cccCCCCC-----C--Ccc----cCCcChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHH
Confidence 99999875321 11 22111000 0 000 01111112 2455556543 44577788899999999
Q ss_pred HHHHHhcCCCeEEecCC--C-eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEe
Q 037144 389 FERLVTSDKRFEVAFPR--N-FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTH 465 (502)
Q Consensus 389 l~~~l~~~~~~~l~~~~--~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 465 (502)
+.+.|+++|+++++.+. . .+++.|.+.... ...+...|.++|+.+-++
T Consensus 271 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~L~~~gI~v~~g 321 (382)
T TIGR03403 271 LEDALLELPDVFVVGDREHRVPNTILISIKGVE-----------------------------GEAMLWDLNKAGIAASTG 321 (382)
T ss_pred HHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCC-----------------------------HHHHHHhhccCCEEEEch
Confidence 99999999999998653 2 346677664321 234555566667643321
Q ss_pred ee--------------EC-----CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 466 AI--------------VG-----GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 466 ~~--------------~~-----g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.. .+ ..+.+|+|++ +.++++|||+++++|+++.++
T Consensus 322 ~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~-~~~t~~did~~~~~l~~~~~~ 375 (382)
T TIGR03403 322 SACASEDLEANPVMVAIGADKELAHTAIRLSLS-RFTTEEEIDYTIEVFKKAVQR 375 (382)
T ss_pred hccCCCCCCcCHHHHHcCCChHHhCeeEEEECC-CCCCHHHHHHHHHHHHHHHHH
Confidence 10 01 1368999986 568888999999999987754
No 37
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.96 E-value=1.4e-25 Score=229.15 Aligned_cols=314 Identities=15% Similarity=0.106 Sum_probs=215.1
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G 196 (502)
...++.+.+++++|.++ .++++|+|++|..++.+... +++.|+++..+|++...+++..|
T Consensus 64 ~~~~l~~~lA~~~g~~~---------~~~~~g~t~a~~~al~~l~~-----------~gd~Vlv~~~~h~s~~~~~~~~G 123 (387)
T PRK09331 64 PIADFHEDLAEFLGMDE---------ARVTHGAREGKFAVMHSLCK-----------KGDYVVLDGLAHYTSYVAAERAG 123 (387)
T ss_pred HHHHHHHHHHHHhCCCc---------EEEeCCHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHHHHHHHcC
Confidence 45566777889999853 57899999999877766543 67789999999999999999999
Q ss_pred CCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh-cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccc
Q 037144 197 IDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE-AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS 275 (502)
Q Consensus 197 lg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~-~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~ 275 (502)
+ +++.+|++.+.++.+|+++|+++|++..+ .+..+.+|+++++++++|.+.|+++|+++|++||+++|||+||+.+
T Consensus 124 ~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g 200 (387)
T PRK09331 124 L---NVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVG 200 (387)
T ss_pred C---EEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccC
Confidence 9 99999983222568999999999976422 1234678999999999999999999999999999999999999887
Q ss_pred cccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCC
Q 037144 276 ACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC 355 (502)
Q Consensus 276 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~s 355 (502)
.++.+... . ++|.+++++|||+++|.+.|++++++. .+.........|.... .. .+.++
T Consensus 201 ~~~~~~~~-~-----g~D~~~~s~~K~l~~~~~~G~l~~~~~-~i~~~~~~~~~~~~~~----------~~----~~~~~ 259 (387)
T PRK09331 201 RMPVDGKK-L-----GADFIVGSGHKSMAASAPSGVLATTEE-YADKVFRTSRKFGVKE----------VE----LLGCT 259 (387)
T ss_pred CcCCCHHH-c-----CCCEEEeeCcccccCCCCEEEEEECHH-HHhhcccccCCCcccc----------ee----eecee
Confidence 66554221 1 689999999999999989999888643 3222222222222110 00 01111
Q ss_pred -CCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144 356 -RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP--RNFSLVCFRVTPSAVMDKLRTKYKNGTY 432 (502)
Q Consensus 356 -r~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 432 (502)
+...+..+++++..+- +. .+++++..++++++++.|++++|++++.+ ...+++.+..+ ....
T Consensus 260 ~~~~~~~~~~aal~~~~-~~-~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~--~~~~----------- 324 (387)
T PRK09331 260 LRGAPLVTLMASFPHVV-ER-VKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETP--SFDE----------- 324 (387)
T ss_pred cCchHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCC--chhH-----------
Confidence 1123344455554431 22 24567778899999999999999999842 23455655543 1100
Q ss_pred ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..........++.+.|.++|..... .....++|+..+. .+++|+++++++|+++.++
T Consensus 325 -------~~~~~~~~~~~~~~~L~~~gI~~~~---~~~~~i~ri~~~g--~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 325 -------IAKKHKRRGFFLYEELKKRGIHGIK---PGATKEFKLSTYG--LTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred -------HhhhccccchhHHHHHHHcCceEEc---cCCceEEEEEecc--CCHHHHHHHHHHHHHHHHh
Confidence 0000011124577778777874222 2234577877644 3667999999999998765
No 38
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.96 E-value=1.2e-26 Score=237.91 Aligned_cols=348 Identities=12% Similarity=0.050 Sum_probs=237.6
Q ss_pred cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHH
Q 037144 82 YFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR 161 (502)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~ 161 (502)
+.+++...+..+.+.+...+.. + .++.+.++.+++++++++++|.+... ..+++++||.++..++....
T Consensus 13 ~~pGP~~~~~~V~~a~~~~~~~----~-~~~~~~~~~~~~~~~l~~~~g~~~~~------~vi~~~~gt~a~~~a~~~~~ 81 (401)
T PLN02409 13 FVPGPVNIPERVLRAMNRPNED----H-RSPAFPALTKELLEDVKYIFKTKSGT------PFIFPTTGTGAWESALTNTL 81 (401)
T ss_pred ccCCCCCCCHHHHHHhcCCCCC----C-CCHHHHHHHHHHHHHHHHHhCCCCCC------EEEEeCCcHHHHHHHHHhcC
Confidence 4566666666666665443322 1 36778889999999999999997532 57889999988866655432
Q ss_pred HHHHHHhCccCCCCeEEEeCCCCchhH--HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEE
Q 037144 162 DRVLKKIGRENISKLVVYSSDQTHCAF--QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCA 239 (502)
Q Consensus 162 ~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~ 239 (502)
. +++.|+++...|++. ...++..|+ +++.++.+++ ..+|+++|++++++++. .++.+|++
T Consensus 82 ~-----------~Gd~Vlv~~~~~~~~~~~~~~~~~g~---~v~~v~~~~~--~~~~~~~l~~~l~~~~~--~~~k~v~~ 143 (401)
T PLN02409 82 S-----------PGDKVVSFRIGQFSLLWIDQMQRLNF---DVDVVESPWG--QGADLDILKSKLRQDTN--HKIKAVCV 143 (401)
T ss_pred C-----------CCCEEEEeCCCchhHHHHHHHHHcCC---ceEEEECCCC--CCCCHHHHHHHHhhCcC--CCccEEEE
Confidence 2 667788888888764 577888999 9999998763 35899999999986320 12458899
Q ss_pred ecCCccccccCChhHHHHH--HHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc
Q 037144 240 TVGTTAITAVDPLKPLCDV--AKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP 317 (502)
Q Consensus 240 t~gtt~~G~idpl~eI~~i--~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~ 317 (502)
++.+|+||.+.|+++|+++ |+++|++++||++++.+..+.+-... ++|++++++|||+++|.|+|+++++++
T Consensus 144 ~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~------~~D~~~~s~~K~l~~P~G~G~l~~~~~ 217 (401)
T PLN02409 144 VHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEW------GVDVALTGSQKALSLPTGLGIVCASPK 217 (401)
T ss_pred EeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCcccccccc------CccEEEEcCccccCcCCCcceeEECHH
Confidence 9999999999999999999 99999999999999876655432111 799999999999999999999998765
Q ss_pred hhhhhhhcC--CcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh
Q 037144 318 SCLLSTLST--NPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT 394 (502)
Q Consensus 318 ~~l~~~~~~--~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~ 394 (502)
. +...... .+.|....... .....+.+. ..+-. ...+.+..+++.+..+|++++.+++.++++++++.|+
T Consensus 218 ~-~~~~~~~~~~~~~~~~~~~~-----~~~~~g~~~-~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~ 290 (401)
T PLN02409 218 A-LEASKTAKSPRVFFDWADYL-----KFYKLGTYW-PYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVE 290 (401)
T ss_pred H-HHHHhcCCCCCeecCHHHHH-----HHHhcCCCC-CCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 3 2222111 11222100000 000000000 00100 1123556677777778999999999999999999999
Q ss_pred cCCCeEEecCC---Cee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-
Q 037144 395 SDKRFEVAFPR---NFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG- 469 (502)
Q Consensus 395 ~~~~~~l~~~~---~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~- 469 (502)
++ |++++.+. .++ +++|+++. +. + ..++.+.+.++..+.+.++...
T Consensus 291 ~~-g~~~~~~~~~~~s~~v~~~~~p~-~~-------------------------~--~~~l~~~l~~~~~i~i~~G~~~~ 341 (401)
T PLN02409 291 AW-GLKLCTKKPEWRSDTVTAVVVPE-GI-------------------------D--SAEIVKNAWKKYNLSLGLGLNKV 341 (401)
T ss_pred Hc-CCeeccCChhhcccceEEEeCCC-CC-------------------------C--HHHHHHHHHHhCCEEEEcCCCcc
Confidence 87 89988642 243 44565532 11 0 1245555544444455554433
Q ss_pred CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 470 GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 470 g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
...++|++.+.+ ++++|+.+++++|.++..+
T Consensus 342 ~~~~~Rig~~g~-~~~~~~~~~~~~~~~~l~~ 372 (401)
T PLN02409 342 AGKVFRIGHLGN-VNELQLLGALAGVEMVLKD 372 (401)
T ss_pred cCCEEEEcCCCC-CCHHHHHHHHHHHHHHHHH
Confidence 356899999876 5777999999999987654
No 39
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.96 E-value=2.1e-26 Score=236.54 Aligned_cols=370 Identities=12% Similarity=0.060 Sum_probs=231.5
Q ss_pred HHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCccccc-----ChhhHHHHHHHHHHHHHhcCCC
Q 037144 58 TILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWIS-----SPAAVELENIVMDWLGQMLDLP 132 (502)
Q Consensus 58 ~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~-----~p~~~~le~~~~~~l~~l~g~~ 132 (502)
+||+++.+.-.++.....+-..++-...+..+|..+.+..... .....|.. ..+..++.+++.+++++++|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~ 80 (398)
T cd00613 3 EVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN--EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMD 80 (398)
T ss_pred HHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccc--cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC
Confidence 7888877642222211111234555455666677776655444 11122332 5667889999999999999986
Q ss_pred CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC----CCCCCEEEEecC
Q 037144 133 KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG----IDRKNIRAIKTT 208 (502)
Q Consensus 133 ~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G----lg~~~v~~v~~~ 208 (502)
.. ..+++++|+.+...++..++.. . .++++|+++...|.+...++..+| . +++.+|++
T Consensus 81 ~~-------~v~~~~~g~~~~~~~~~~~~~~--~------~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~---~~~~v~~~ 142 (398)
T cd00613 81 VA-------NASLQDEATAAAEAAGLAAIRA--Y------HKRNKVLVPDSAHPTNPAVARTRGEPLGI---EVVEVPSD 142 (398)
T ss_pred cc-------ceeccCchHHHHHHHHHHHHhc--c------cCCCEEEEcCccCcchHHHHHHhcccCCc---EEEEeccC
Confidence 53 3566665555544454444332 0 037789999999999988888887 7 89999986
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCCh-hHHHHHHHHhCCEEEeecccccccccCccchhhhc
Q 037144 209 KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPL-KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID 287 (502)
Q Consensus 209 ~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl-~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~ 287 (502)
+ ++.+|+++|++++.+++ .+|+++.++ ++|.+.|+ ++|+++|++||+|+++|++++.+....+...
T Consensus 143 ~--~~~~d~~~l~~~i~~~t------~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~---- 209 (398)
T cd00613 143 E--GGTVDLEALKEEVSEEV------AALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGE---- 209 (398)
T ss_pred C--CCCcCHHHHHHhcCCCe------EEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHH----
Confidence 4 35899999999886543 367788776 68999885 9999999999999999999876544332211
Q ss_pred CCCCCCeeEEccCCcCCCCC-----cceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCC----cccccCCC--
Q 037144 288 GVECVDSFSFNPHKWLFTTL-----DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYK----DWQITLCR-- 356 (502)
Q Consensus 288 ~~~~aDsi~~~~hK~l~~p~-----~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~----~~~~~~sr-- 356 (502)
.++|+++.++|||+ .|. ++|++++++. .. +.+.....+........ .....+.. ....+.++
T Consensus 210 --~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~-~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~r~e~~~~~ 282 (398)
T cd00613 210 --YGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKE-LV-RFLPGRLVGVTKDAEGN--RAFRLALQTREQHIRREKATSN 282 (398)
T ss_pred --cCCCEEEeeccccC-CCCCCCCCceeEEEEhhh-hH-hhCCCCeeccccccCCC--cceEEecccchhhccccccccc
Confidence 17999999999999 663 4667776543 22 22211100000000000 00000000 00000111
Q ss_pred -----CCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCC
Q 037144 357 -----RFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGT 431 (502)
Q Consensus 357 -----~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~ 431 (502)
...+...|.++..++.++++++.++..+++++++++|+++++......+...+++|++....
T Consensus 283 ~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~------------- 349 (398)
T cd00613 283 ICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLY------------- 349 (398)
T ss_pred ceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCcc-------------
Confidence 11224566777778999999999999999999999999986554222234455666654210
Q ss_pred cccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144 432 YDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV 495 (502)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l 495 (502)
+....++.++|.++|... ......+...+|++.. ..++++|||++++.|
T Consensus 350 -------------~~~~~~~~~~L~~~gi~~-~~~~~~~~~~lRis~~-~~~t~edid~~~~~L 398 (398)
T cd00613 350 -------------GIRAEDLAKALIDGGFHA-PTMYLPVDGTLMIEPT-ETETKEELDALLEAL 398 (398)
T ss_pred -------------hHHHHHHHHhhhhcCccc-cccccCCCCeEEEEcC-CCCCHHHHHHHHHhC
Confidence 012346677777778643 2211234568999985 667788999999864
No 40
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.96 E-value=3.4e-26 Score=235.26 Aligned_cols=356 Identities=12% Similarity=0.082 Sum_probs=226.8
Q ss_pred CCcccccCCCCCCHHHHHHHHHHhhcC----CCCcccccC-hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCch
Q 037144 76 SPNYFAYFPATSSVAGIVGEMLSSGFN----VVGLDWISS-PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTC 150 (502)
Q Consensus 76 ~p~~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~~~~-p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt 150 (502)
+..||++...++. |..+.+.+..+++ +....|..+ .....++.+..+ + +++|.+.+ ..+||+|+|
T Consensus 27 ~~iyld~~a~g~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~-------~v~~~~~~t 96 (406)
T TIGR01814 27 AVIYLDGNSLGLM-PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKED-------EVVVMNTLT 96 (406)
T ss_pred CcEEecCCCcCcC-cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCC-------cEEEeCCch
Confidence 3467776665654 6666666654442 222222221 222334444433 4 88998654 689999999
Q ss_pred HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH----HHHHHcCCCCCCE----EEEecCCCCCcccCHHHHHH
Q 037144 151 EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ----KAAQIVGIDRKNI----RAIKTTKSSSYGLSAESVLS 222 (502)
Q Consensus 151 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~----~aa~~~Glg~~~v----~~v~~~~~~~~~~d~~~Le~ 222 (502)
+++..++...... +.++.+|+++...|.|.. ..++..|+ ++ +.++.+. ++.+|++++++
T Consensus 97 ~~l~~~~~~~~~~--------~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~~~~--~g~~~~~~l~~ 163 (406)
T TIGR01814 97 INLHLLLASFYKP--------TPKRYKILLEAKAFPSDHYAIESQLQLHGL---TVEESMVQIEPRE--EETLRLEDILD 163 (406)
T ss_pred HHHHHHHHHhcCC--------cCCccEEEecCCCCChHHHHHHHHHHhcCC---CcccceEEeccCC--CCccCHHHHHH
Confidence 9876665543110 112447888889998843 34566788 76 4566543 46889999999
Q ss_pred HHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCc
Q 037144 223 QINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKW 302 (502)
Q Consensus 223 ~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~ 302 (502)
.++... ..+.+|++++.++.+|.+.|+++|+++|+++|++++||++++.+.++++-.. .++|++++++|||
T Consensus 164 ~~~~~~---~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~------~gvD~~~~s~hK~ 234 (406)
T TIGR01814 164 TIEKNG---DDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHD------WGVDFACWCTYKY 234 (406)
T ss_pred HHHhcC---CCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCccccccc------CCCCEEEEcCccc
Confidence 886421 2345899999999999999999999999999999999999999888765321 1799999999999
Q ss_pred CCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC--CCchHHHHHHHHhcHHHHHHHHH
Q 037144 303 LFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR--FRSLKLWVVIRNFGVANLRNFIR 380 (502)
Q Consensus 303 l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~ 380 (502)
++.|+| |+++++++... ........|.....................++.+.+ ...+.+..+++.+...|++++.+
T Consensus 235 l~g~pG-~~l~v~~~~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~ 312 (406)
T TIGR01814 235 LNAGPG-AGAFVHEKHAH-TERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRK 312 (406)
T ss_pred cCCCCC-eEEEEehhhhh-hcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 986767 66666554321 111111122111000000000000011111111211 12235556777776778899999
Q ss_pred HHHHHHHHHHHHHhcC----CCeEEecCC----CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHH
Q 037144 381 SHVGMAKLFERLVTSD----KRFEVAFPR----NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELL 452 (502)
Q Consensus 381 ~~~~la~~l~~~l~~~----~~~~l~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 452 (502)
+...+++++++.|++. ++++++.+. ..++++|.++ .. ...+.
T Consensus 313 ~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~-----------------------------~~~~~ 362 (406)
T TIGR01814 313 KSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VP-----------------------------GKAVF 362 (406)
T ss_pred HHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CC-----------------------------HHHHH
Confidence 9999999999999875 469888652 2457888765 21 23566
Q ss_pred HHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 453 ESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 453 ~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
+.|.++|.+ +. ..+...+|+|+++++|+++||++++++|+++.
T Consensus 363 ~~L~~~gi~-v~---~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 363 QALIKRGVI-GD---KREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred HHHHHCCEE-Ee---ccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 677777764 32 22335899998666788889999999998864
No 41
>PRK02948 cysteine desulfurase; Provisional
Probab=99.95 E-value=2.4e-26 Score=234.73 Aligned_cols=341 Identities=11% Similarity=0.105 Sum_probs=225.0
Q ss_pred ccccCCCCCCHHHHHHHHHHhhc----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHH
Q 037144 79 YFAYFPATSSVAGIVGEMLSSGF----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALL 154 (502)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~ 154 (502)
||++-..++.++.+ .+.+..++ .+....+..+.....+.+++++.+++++|.+.+ ..++++|+|+++.
T Consensus 3 yld~a~~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~i~~~~g~t~a~~ 74 (381)
T PRK02948 3 YLDYAATTPMSKEA-LQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQ-------GIYFTSGGTESNY 74 (381)
T ss_pred eccCCCCCCCCHHH-HHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCcHHHHHH
Confidence 56665555544444 33333333 222233445556667788899999999998754 5889999999998
Q ss_pred HHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH---HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC
Q 037144 155 CTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA---AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE 231 (502)
Q Consensus 155 ~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a---a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g 231 (502)
.++.+....+. .++++|+++...|+|+... ++..|+ +++.+|+++ ++.+|+++|++++++.
T Consensus 75 ~~~~~~~~~~~-------~~g~~vv~~~~~h~s~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~l~~~---- 138 (381)
T PRK02948 75 LAIQSLLNALP-------QNKKHIITTPMEHASIHSYFQSLESQGY---TVTEIPVDK--SGLIRLVDLERAITPD---- 138 (381)
T ss_pred HHHHHHHHhcc-------CCCCEEEECCcccHHHHHHHHHHHhCCC---EEEEEeeCC--CCCCCHHHHHHhcCCC----
Confidence 87776653210 1467888999999887665 455687 999999875 4689999999988643
Q ss_pred CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceE
Q 037144 232 LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCC 311 (502)
Q Consensus 232 ~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~ 311 (502)
+.+|++++++|++|.+.|+++|.++|+++|+++|||++++.+....+- .. .++|+++.++||+++ |.|+|+
T Consensus 139 --~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~-~~-----~~~d~~~~s~~K~~g-p~G~G~ 209 (381)
T PRK02948 139 --TVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDV-FE-----MGIDSLSVSAHKIYG-PKGVGA 209 (381)
T ss_pred --CEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCc-cc-----CCCCEEEecHHhcCC-CCcEEE
Confidence 348999999999999999999999999999999999988665543321 11 179999999999764 888999
Q ss_pred EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 037144 312 LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFER 391 (502)
Q Consensus 312 ~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~ 391 (502)
+++++...+.. ........ . .+..++ .......++..+++.. .++..+..++..++++++.+
T Consensus 210 l~~~~~~~~~~-------~~~~~~~~-----~--~~~~~t---~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~ 271 (381)
T PRK02948 210 VYINPQVRWKP-------VFPGTTHE-----K--GFRPGT---VNVPGIAAFLTAAENI-LKNMQEESLRFKELRSYFLE 271 (381)
T ss_pred EEEcCCCCCCC-------cccCCCCC-----C--CcCCCC---ccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 99875521110 00000000 0 000000 0011223444455443 35678888999999999999
Q ss_pred HHhcCCCeEEecC--C--C-eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee
Q 037144 392 LVTSDKRFEVAFP--R--N-FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA 466 (502)
Q Consensus 392 ~l~~~~~~~l~~~--~--~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 466 (502)
.|+++ ++++... + . ..++.|...... ..++...|.++|+.+..+.
T Consensus 272 ~L~~~-~~~v~~~~~~~~~~~~i~~~~~~~~~-----------------------------~~~~~~~l~~~gI~v~~g~ 321 (381)
T PRK02948 272 QIQTL-PLPIEVEGHSTSCLPHIIGVTIKGIE-----------------------------GQYTMLECNRRGIAISTGS 321 (381)
T ss_pred HHhcC-CCCEEEeCCCccCcCCEEEEEeCCCC-----------------------------HHHHHHhcccCCEEEEchH
Confidence 99988 5554421 1 1 235556553211 2344556666676543221
Q ss_pred e----E---------------CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 467 I----V---------------GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 467 ~----~---------------~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
. + ....++|+|++ +.++++|+++++++|+++.+.
T Consensus 322 ~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~-~~~t~~di~~l~~~l~~~~~~ 374 (381)
T PRK02948 322 ACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFG-QQTTKDQIDTTIHALETIGNQ 374 (381)
T ss_pred hcCCCCCCCCHHHHHcCCChHHhCceEEEEcC-CCCCHHHHHHHHHHHHHHHHH
Confidence 1 1 12468999986 567788999999999988764
No 42
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.95 E-value=7e-26 Score=232.59 Aligned_cols=340 Identities=12% Similarity=0.093 Sum_probs=224.7
Q ss_pred cccccCCCCCCHHHHHHHHHHhhcCCC----CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144 78 NYFAYFPATSSVAGIVGEMLSSGFNVV----GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL 153 (502)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~n~~----~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~ 153 (502)
.||++...++.++. +.+.+...+... ...|..+....++..++++.+++++|.+.. ..++++|+|+++
T Consensus 19 ~yl~~~~~~~~p~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~-------~v~~~~~~t~~l 90 (397)
T TIGR01976 19 VFFDNPAGTQIPQS-VADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPP-------EVVFGANATSLT 90 (397)
T ss_pred EEecCCccCCCCHH-HHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC-------eEEEeCCHHHHH
Confidence 67777555554444 444444433211 123433445566778899999999998754 478889988887
Q ss_pred HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh
Q 037144 154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE 229 (502)
Q Consensus 154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~ 229 (502)
...+.+.... . .+++.|+++...|+|.. ..++..|+ +++.++++++ ++.+|+++|+++|++++
T Consensus 91 ~~~~~~~~~~-~-------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~i~~~~- 157 (397)
T TIGR01976 91 FLLSRAISRR-W-------GPGDEVIVTRLDHEANISPWLQAAERAGA---KVKWARVDEA-TGELHPDDLASLLSPRT- 157 (397)
T ss_pred HHHHHHHHhc-C-------CCCCEEEEcCCchHhHHHHHHHHHHhcCC---EEEEEecccc-CCCcCHHHHHHhcCCCc-
Confidence 5444333111 0 15678889988997753 56677899 9999998753 46899999999996543
Q ss_pred cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc
Q 037144 230 AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC 309 (502)
Q Consensus 230 ~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~ 309 (502)
.+|++++++|++|.+.|+++|+++|+++|++++||++++.+..+.+ ... .++|++++++|||++ |. +
T Consensus 158 -----~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~-~~~-----~~~d~~~~s~~K~~g-~~-~ 224 (397)
T TIGR01976 158 -----RLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLID-VQA-----TGADFLTCSAYKFFG-PH-M 224 (397)
T ss_pred -----eEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCC-HHH-----cCCCEEEEechhhcC-Cc-e
Confidence 4899999999999999999999999999999999999966543322 111 178999999999985 43 8
Q ss_pred eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCC-CCC-CchHHHHHHHHhcHH--------------
Q 037144 310 CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC-RRF-RSLKLWVVIRNFGVA-------------- 373 (502)
Q Consensus 310 g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~s-r~~-~al~~~~~l~~~g~~-------------- 373 (502)
|+++++++ .+.........|..... ...++.+ +.+ ..+.+..+++.+...
T Consensus 225 G~l~~~~~-~~~~l~~~~~~~~~~~~-------------~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~ 290 (397)
T TIGR01976 225 GILWGRPE-LLMNLPPYKLTFSYDTG-------------PERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVA 290 (397)
T ss_pred EEEEEcHH-HHhhCCCccccCccCCC-------------cchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhH
Confidence 88887654 22211111111211110 0012222 222 234555666655322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEecC----CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHH
Q 037144 374 NLRNFIRSHVGMAKLFERLVTSDKRFEVAFP----RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNR 449 (502)
Q Consensus 374 g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (502)
++++..++..++++++++.|+++++++++.+ ...+++.|...... ..
T Consensus 291 ~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~ 341 (397)
T TIGR01976 291 SFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLP-----------------------------PQ 341 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcC-----------------------------HH
Confidence 3677788889999999999999988999754 25678877664321 23
Q ss_pred HHHHHHHhcCcEEEEeeeE-----------CCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144 450 ELLESINVSGKVFMTHAIV-----------GGIYVLRFAAGNSMTMESHVRAAWTVV 495 (502)
Q Consensus 450 ~l~~~l~~~g~~~~~~~~~-----------~g~~~lR~~~~~~~t~~~di~~~~~~l 495 (502)
.+.++|.++|..+...... ....++|+|++. .++++||++++++|
T Consensus 342 ~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~t~~di~~l~~~l 397 (397)
T TIGR01976 342 RVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAH-YNTAEEVDRLLEAL 397 (397)
T ss_pred HHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeec-cCCHHHHHHHHHhC
Confidence 5677777778654332111 134589999975 56777999999864
No 43
>PRK14012 cysteine desulfurase; Provisional
Probab=99.95 E-value=3.8e-26 Score=234.79 Aligned_cols=341 Identities=15% Similarity=0.120 Sum_probs=219.7
Q ss_pred CcccccCCCCCCHHHHHHHHHHhhcC---CCCcccc----cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCc
Q 037144 77 PNYFAYFPATSSVAGIVGEMLSSGFN---VVGLDWI----SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTT 149 (502)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~~~~n---~~~~~~~----~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~gg 149 (502)
+.||++...++.++.+ .+.+..++. ....... .+-.....-+++.+++++++|.+.+ .+++++||
T Consensus 4 ~iyld~a~~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~-------~v~~~~g~ 75 (404)
T PRK14012 4 PIYLDYSATTPVDPRV-AEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPR-------EIVFTSGA 75 (404)
T ss_pred eEEecCcCCCCCCHHH-HHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC-------eEEEeCCH
Confidence 3577777666655554 444433332 2111111 1111223445678889999998754 58999999
Q ss_pred hHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHH
Q 037144 150 CEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI---VGIDRKNIRAIKTTKSSSYGLSAESVLSQINL 226 (502)
Q Consensus 150 t~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~---~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~ 226 (502)
|+++..++.+......+ +++.|+++..+|+++..+++. .|+ +++.+++++ ++.+|+++|+++|++
T Consensus 76 t~al~~~l~~l~~~~~~-------~gd~Vi~~~~~~~s~~~~~~~~~~~g~---~~~~v~~~~--~g~~d~~~l~~~i~~ 143 (404)
T PRK14012 76 TESDNLAIKGAAHFYQK-------KGKHIITSKTEHKAVLDTCRQLEREGF---EVTYLDPQS--NGIIDLEKLEAAMRD 143 (404)
T ss_pred HHHHHHHHHHHHHhhcC-------CCCEEEEecCccHHHHHHHHHHHhCCC---EEEEEccCC--CCcCCHHHHHHhcCC
Confidence 99998887766432111 567899999999988666544 488 999999875 568999999999976
Q ss_pred HHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC
Q 037144 227 DVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT 306 (502)
Q Consensus 227 ~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p 306 (502)
++ .+|++++.+|++|.+.|+++|.++|+++|+++|+|+|++.+..+.+-. . .++|++++++||++ +|
T Consensus 144 ~t------~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~-~-----~~~D~~~~s~~K~~-gp 210 (404)
T PRK14012 144 DT------ILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLS-K-----LKVDLMSFSAHKIY-GP 210 (404)
T ss_pred CC------EEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcc-c-----CCCCEEEEehhhcc-CC
Confidence 44 388999999999999999999999999999999999998876654321 1 16999999999955 57
Q ss_pred CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC-CC-CchHHHHHHHHhcHHHHHHHHHHHHH
Q 037144 307 LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR-RF-RSLKLWVVIRNFGVANLRNFIRSHVG 384 (502)
Q Consensus 307 ~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr-~~-~al~~~~~l~~~g~~g~~~~~~~~~~ 384 (502)
.|+|+++++++... ...+.+.... .. ..++.+. .. ..+.+-.++... ..+..++.++..+
T Consensus 211 ~g~G~l~~~~~~~~----~~~~~~~g~~-~~------------~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~ 272 (404)
T PRK14012 211 KGIGALYVRRKPRV----RLEAQMHGGG-HE------------RGMRSGTLPTHQIVGMGEAARIA-KEEMATENERIRA 272 (404)
T ss_pred CceEEEEEecCCCC----CCCceecCCC-cc------------CCccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 89999999876321 1111111110 00 0011111 10 112223444433 3456778899999
Q ss_pred HHHHHHHHHhcCCCeEEecCC-----CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh--
Q 037144 385 MAKLFERLVTSDKRFEVAFPR-----NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-- 457 (502)
Q Consensus 385 la~~l~~~l~~~~~~~l~~~~-----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-- 457 (502)
+++++.+.|++++++.+..++ ....++|...+. + .+...+..
T Consensus 273 l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------------------------~----~~~~~l~~~~ 321 (404)
T PRK14012 273 LRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVEG---------------------------E----SLIMALKDLA 321 (404)
T ss_pred HHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcCH---------------------------H----HHHHhCCCeE
Confidence 999999999999998876431 122344444221 1 22233221
Q ss_pred --cCcEEEEeee--------------ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 458 --SGKVFMTHAI--------------VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 458 --~g~~~~~~~~--------------~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.|.. +.+.. ......+|+++. +.++++|||++++.|+++++.
T Consensus 322 i~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~-~~~t~~dvd~~~~~l~~~~~~ 379 (404)
T PRK14012 322 VSSGSA-CTSASLEPSYVLRALGLNDELAHSSIRFSLG-RFTTEEEIDYAIELVRKSIGK 379 (404)
T ss_pred EEchhh-hCCCCCCCCHHHHHcCCChhhcCceEEEEec-CCCCHHHHHHHHHHHHHHHHH
Confidence 1211 11110 012368999986 557888999999999987653
No 44
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.95 E-value=2.5e-24 Score=218.07 Aligned_cols=310 Identities=14% Similarity=0.101 Sum_probs=208.8
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI 197 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl 197 (502)
.+++.+.+++++|.+ ..++++|+++++..++.+... +++.|+++..+|++...+++..|+
T Consensus 46 ~~~l~~~la~~~g~~---------~i~~~~g~t~al~~~l~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~g~ 105 (361)
T cd06452 46 IKDFHHDLAEFLGMD---------EARVTPGAREGKFAVMHSLCE-----------KGDWVVVDGLAHYTSYVAAERAGL 105 (361)
T ss_pred HHHHHHHHHHHcCCc---------eEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCcchHHHHHHHhcCC
Confidence 334556688899982 478999999998877765532 677888899999999999999999
Q ss_pred CCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc-CCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccc
Q 037144 198 DRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA-ELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 276 (502)
Q Consensus 198 g~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~-g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~ 276 (502)
+++.+|+++++++.+|+++|++++++..+. +..+.+|++++++|++|.+.|+++|+++|+++|+++|+|+||+.+.
T Consensus 106 ---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~ 182 (361)
T cd06452 106 ---NVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGR 182 (361)
T ss_pred ---EEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCC
Confidence 999999986545799999999999754322 2245688899999999999999999999999999999999998665
Q ss_pred ccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc-ccCC
Q 037144 277 CICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ-ITLC 355 (502)
Q Consensus 277 ~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~-~~~s 355 (502)
...+.. .. ++|+++.++||+++.|.++|++++++. ......... .++.. ...+ +..+
T Consensus 183 ~~~~~~-~~-----~~d~~~~s~~K~l~~~~~~G~l~~~~~-~~~~l~~~~-~~~~~--------------~~~~~~~~~ 240 (361)
T cd06452 183 MPVSGK-EL-----GADFIVGSGHKSMAASAPIGVLATTEE-WADIVFRTS-QMFKI--------------KEVELLGCT 240 (361)
T ss_pred cCCCHH-Hc-----CCCEEEecCCccccCCCCeEEEEECHH-HHHHHhccc-ccccc--------------ceeeeeccc
Confidence 433221 11 689999999999998888998887643 333221211 11110 0001 1111
Q ss_pred CC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144 356 RR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF--PRNFSLVCFRVTPSAVMDKLRTKYKNGTY 432 (502)
Q Consensus 356 r~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 432 (502)
.+ ..+..++.++..+ .+.+ +..++..++++++++.|+++||++++. +...+++.|+.......
T Consensus 241 ~~~~~~~~~~~al~~~-~~~~-~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~------------ 306 (361)
T cd06452 241 LRGAPLVTLMASFPHV-KERV-KRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEI------------ 306 (361)
T ss_pred cCchHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchh------------
Confidence 11 2233445555443 2333 445556677899999999999999874 33456666665311000
Q ss_pred ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
.........++.+.|.++|... .. .....++|+++.. .+++++++++++|+++.
T Consensus 307 --------~~~~~~~~~~~~~~L~~~gI~~-~~--~~~~~~~ri~~~g--~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 307 --------AKKHKRRGYFLYSELKKRGIHG-IK--PGLTRYFKLSTYG--LTWEQVEYVVDAFKEIA 360 (361)
T ss_pred --------hhhccccchhHHHHHHHcCceE-Ec--CCCceEEEEEecC--CCHHHHHHHHHHHHHHh
Confidence 0000001125777887778752 11 1223589998743 36679999999998764
No 45
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.94 E-value=1.5e-25 Score=219.22 Aligned_cols=222 Identities=16% Similarity=0.165 Sum_probs=166.4
Q ss_pred CCCcccccCCCCCCHHHHHHHH---HHhhc-CCCCcccccChhh-HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCc
Q 037144 75 QSPNYFAYFPATSSVAGIVGEM---LSSGF-NVVGLDWISSPAA-VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTT 149 (502)
Q Consensus 75 ~~p~~~~~~~~~~~~~~~~~~~---l~~~~-n~~~~~~~~~p~~-~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~gg 149 (502)
..|-|++....++..|.++..+ +..++ |+... ..+..+ ..+| ++++.+++++|.++. +.+||+|+
T Consensus 42 ~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~--~y~w~~~~~~E-~aR~~VAklInAd~~-------dIiFts~A 111 (428)
T KOG1549|consen 42 TRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSR--SYGWKAEDAVE-AAREQVAKLINADPS-------DIVFTSGA 111 (428)
T ss_pred CccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCcc--ccchhhhHHHH-HHHHHHHHHhCCCCC-------cEEEeCCc
Confidence 4677888887777777665443 33333 33322 111222 2344 578999999999876 69999999
Q ss_pred hHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc---CCCCCCEEEEecCCCCCcccCHHHHHHHHHH
Q 037144 150 CEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV---GIDRKNIRAIKTTKSSSYGLSAESVLSQINL 226 (502)
Q Consensus 150 t~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~---Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~ 226 (502)
||||.+++...-.. .+. + .+-.|+....+|.|+..+++.+ |+ .|+.+|++. ++..|.+.+++.|++
T Consensus 112 TEs~Nlvl~~v~~~-~~~----~-~~k~iitl~~eH~~v~~s~~~l~~~g~---~Vt~lpv~~--~~~~d~~~~~~~i~~ 180 (428)
T KOG1549|consen 112 TESNNLVLKGVARF-FGD----K-TKKHIITLQTEHPCVLDSCRALQEEGL---EVTYLPVED--SGLVDISKLREAIRS 180 (428)
T ss_pred hHHHHHHHHHhhcc-ccc----c-ccceEEEecccCcchhHHHHHHHhcCe---EEEEeccCc--cccccHHHHHHhcCC
Confidence 99998777654221 111 1 1227788889999988877655 87 999999983 579999999999999
Q ss_pred HHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC
Q 037144 227 DVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT 306 (502)
Q Consensus 227 ~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p 306 (502)
+++ +|.+.+.++..|.+.|++||+.+|+++|+.+|+|+||+.+....+- ..+ ++|+++++.|||++.|
T Consensus 181 ~T~------lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV-~el-----n~D~~s~s~HK~ygp~ 248 (428)
T KOG1549|consen 181 KTR------LVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDV-QEL-----NADFLSISAHKIYGPP 248 (428)
T ss_pred Cce------EEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccH-HHc-----CchheeeecccccCCC
Confidence 775 8999999999999999999999999999999999999999888763 333 8999999999999877
Q ss_pred CcceEEEeeCchhhhhhhcCCcccccC
Q 037144 307 LDCCCLWVKDPSCLLSTLSTNPQYLKN 333 (502)
Q Consensus 307 ~~~g~~~~r~~~~l~~~~~~~~~yl~~ 333 (502)
. +|++|+|.... .....+.+..+
T Consensus 249 ~-iGaLYvr~~~~---~~~~~p~~~GG 271 (428)
T KOG1549|consen 249 G-IGALYVRRKRP---RLRVEPPLSGG 271 (428)
T ss_pred c-ceEEEEccCCC---cccccCcccCC
Confidence 5 99999987221 23344555544
No 46
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.94 E-value=8e-25 Score=221.98 Aligned_cols=342 Identities=11% Similarity=0.065 Sum_probs=226.4
Q ss_pred cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHH
Q 037144 82 YFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR 161 (502)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~ 161 (502)
+.|++......+.+.+.... ..+ .+.+..+.+++++.+++++|.++.. ...++|+|||+++..++....
T Consensus 7 ~~pgp~~~~~~v~~~~~~~~----~~~--~~~~~~~~~~~r~~la~l~~~~~~~-----~~i~~t~~~t~al~~~~~~l~ 75 (363)
T TIGR02326 7 LTPGPLTTSRTVKEAMLFDW----CTW--DSDYNIVVEQIRQQLLALATAEEGY-----TSVLLQGSGTFAVEAVIGSAV 75 (363)
T ss_pred ecCCCCCCCHHHHHHhCCCC----CCC--ChHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCCCHHHHHHHHHhcC
Confidence 44555554444444443322 122 2456667778999999999997531 147899999999977665543
Q ss_pred HHHHHHhCccCCCCeEEEeCCCCchh-HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe
Q 037144 162 DRVLKKIGRENISKLVVYSSDQTHCA-FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCAT 240 (502)
Q Consensus 162 ~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t 240 (502)
.. ++.+++++...|.+ +.+.++..|+ +++.+|+++ ++.+|++++++++++.++ +.+|.++
T Consensus 76 ~~----------~~~vlv~~~~~~~~~~~~~a~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~~~----~~~v~~~ 136 (363)
T TIGR02326 76 PK----------DGKLLVVINGAYGARIVQIAEYLGI---PHHVVDTGE--VEPPDVVEVEAILAADPA----ITHIALV 136 (363)
T ss_pred CC----------CCeEEEEeCChhhHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHHHHHhhCCC----ccEEEEE
Confidence 21 44556666555555 4577888999 999999875 458999999999876421 2367888
Q ss_pred cCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhh
Q 037144 241 VGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCL 320 (502)
Q Consensus 241 ~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l 320 (502)
+.+|++|.+.|+++|+++|++||++++||++++.+..+.+- .. + ++|+++.++|||+++|.|.|+++++++..
T Consensus 137 ~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~-~~----~-~~D~~~~s~~K~l~~p~G~G~l~~~~~~~- 209 (363)
T TIGR02326 137 HCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDI-AE----L-HIDYLISSANKCIQGVPGFGFVIARQAEL- 209 (363)
T ss_pred eecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccch-hh----c-CccEEEecCccccccCCcceEEEECHHHH-
Confidence 88999999999999999999999999999988766554431 11 1 68999999999999999999999876532
Q ss_pred hhhhcCCcc-cccCccCCCCCcccccCCCcccccCCCCC-----CchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHH
Q 037144 321 LSTLSTNPQ-YLKNEATDQEPKEQEVGYKDWQITLCRRF-----RSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERLV 393 (502)
Q Consensus 321 ~~~~~~~~~-yl~~~~~~~~~~~~~~~~~~~~~~~sr~~-----~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l 393 (502)
........+ |+.... .+..... ....+++ ..+++..+++.+..+ +++++.+++.++++++++.|
T Consensus 210 ~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L 280 (363)
T TIGR02326 210 AACKGNARSLSLDLYD--------QWRCMED-NHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGM 280 (363)
T ss_pred HHhhcCCCceeecHHH--------HHHHHhc-cCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence 221111111 110000 0000000 0011111 224556667666555 58888999999999999999
Q ss_pred hcCCCeEEecCC--CeeE-EEEEeecC-cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC
Q 037144 394 TSDKRFEVAFPR--NFSL-VCFRVTPS-AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG 469 (502)
Q Consensus 394 ~~~~~~~l~~~~--~~~~-v~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~ 469 (502)
+++ |++++.++ ..++ ++|++++. .. ....+.+.|.++|.++. ++...
T Consensus 281 ~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~v~~~L~~~gi~v~-~g~~~ 331 (363)
T TIGR02326 281 RAL-GFEPLLDDEIQSPIITSFYSPEDPDY---------------------------RFADFYQRLKEQGFVIY-PGKVS 331 (363)
T ss_pred HHc-CCeeccCcccCCceEEEEECCCCCCC---------------------------CHHHHHHHHHHCCEEEE-CCcCC
Confidence 988 78887543 3444 45665431 00 02356777777776543 33222
Q ss_pred CEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 470 GIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 470 g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
+..++|++++.+ .+.+|+++++++|+++.
T Consensus 332 ~~~~iRi~~~~~-~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 332 QVDCFRIGNIGE-VDAADITRLLTAIGKAM 360 (363)
T ss_pred CCCEEEEecCCC-CCHHHHHHHHHHHHHHh
Confidence 346899997655 46779999999998865
No 47
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=1e-24 Score=214.55 Aligned_cols=324 Identities=15% Similarity=0.100 Sum_probs=233.2
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch--
Q 037144 109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC-- 186 (502)
Q Consensus 109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~-- 186 (502)
..+|.+..+.+++.+.+..+|+.++.. -.+++++||.++..++..... ++++|++...+-+
T Consensus 31 h~s~~F~~~~~~~~~~L~~v~~t~~~~------~~ll~gsGt~amEAav~sl~~-----------pgdkVLv~~nG~FG~ 93 (383)
T COG0075 31 HRSPDFVGIMKEVLEKLRKVFGTENGD------VVLLSGSGTLAMEAAVASLVE-----------PGDKVLVVVNGKFGE 93 (383)
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCc------EEEEcCCcHHHHHHHHHhccC-----------CCCeEEEEeCChHHH
Confidence 456889999999999999999998543 467889999888766665544 5666666655654
Q ss_pred hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV 266 (502)
Q Consensus 187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l 266 (502)
.|.+.++.+|. +++.+...++. .+|+++++++|+++.. ..+|.++++.|+||..+|+++|+++|++||..+
T Consensus 94 R~~~ia~~~g~---~v~~~~~~wg~--~v~p~~v~~~L~~~~~----~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~ 164 (383)
T COG0075 94 RFAEIAERYGA---EVVVLEVEWGE--AVDPEEVEEALDKDPD----IKAVAVVHNETSTGVLNPLKEIAKAAKEHGALL 164 (383)
T ss_pred HHHHHHHHhCC---ceEEEeCCCCC--CCCHHHHHHHHhcCCC----ccEEEEEeccCcccccCcHHHHHHHHHHcCCEE
Confidence 58889999999 99999998865 8999999999985432 348999999999999999999999999999999
Q ss_pred Eeeccccccccc--CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCC-c-ccccCccCCCCCcc
Q 037144 267 HVDAAYAGSACI--CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTN-P-QYLKNEATDQEPKE 342 (502)
Q Consensus 267 hVDaA~g~~~~~--~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~-~yl~~~~~~~~~~~ 342 (502)
+||+.-+.+... .+++ ++|.+..+++|+++.|+|.+++.++++..- ...... + -|+.-.....+ ..
T Consensus 165 iVDaVsS~Gg~~~~vd~w--------giDv~itgSQK~l~~PPGla~v~~S~~a~e-~~~~~~~~~~ylDL~~~~~~-~~ 234 (383)
T COG0075 165 IVDAVSSLGGEPLKVDEW--------GIDVAITGSQKALGAPPGLAFVAVSERALE-AIEERKHPSFYLDLKKWLKY-ME 234 (383)
T ss_pred EEEecccCCCcccchhhc--------CccEEEecCchhccCCCccceeEECHHHHH-HHhcCCCCceeecHHHHHHH-Hh
Confidence 999865444433 3444 899999999999999999999999877542 222222 2 24322110000 00
Q ss_pred cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CeeEEEEEeecCcch
Q 037144 343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR--NFSLVCFRVTPSAVM 420 (502)
Q Consensus 343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~--~~~~v~f~~~~~~~~ 420 (502)
. .....+|...+ .-.++..+++.+-.+|++++++++.++++++++.++++ ||+++..+ .+++++....|.+.+
T Consensus 235 ~-~~~~p~Tppv~---~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g~~ 309 (383)
T COG0075 235 K-KGSTPYTPPVN---LIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEGVD 309 (383)
T ss_pred h-cCCCCCCCCHH---HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCCCC
Confidence 0 00111111100 12477788888889999999999999999999999998 89998733 355555545554321
Q ss_pred hhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE-CCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV-GGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
..++...+.+++.+.++++.. ....++||..+. ..+.+|+.+++.+|..++
T Consensus 310 ---------------------------~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG-~~~~~dv~~~l~ale~~L 361 (383)
T COG0075 310 ---------------------------DKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMG-NVRPEDVLAALAALEAAL 361 (383)
T ss_pred ---------------------------cHHHHHHHHHhCCEEecccccccCccEEEEecCc-cCCHHHHHHHHHHHHHHH
Confidence 112222455555555555432 234689999998 567779999999999887
Q ss_pred Hh
Q 037144 500 EA 501 (502)
Q Consensus 500 ~~ 501 (502)
++
T Consensus 362 ~~ 363 (383)
T COG0075 362 RE 363 (383)
T ss_pred HH
Confidence 65
No 48
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.94 E-value=5.5e-24 Score=233.09 Aligned_cols=328 Identities=13% Similarity=-0.001 Sum_probs=225.0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCch----HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTC----EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH 185 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt----~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (502)
...+..++-.++.+|+++++|++ .++|+++++ +++++++....+. .|. ..+.+|++|..+|
T Consensus 562 ~~~g~~~~~~~~r~~la~i~g~~---------~v~f~pnaga~ge~a~~~vi~~~~~~----~Gd--~~r~~vli~~~aH 626 (993)
T PLN02414 562 QAQGYQEMFEDLGDLLCEITGFD---------SFSLQPNAGAAGEYAGLMVIRAYHLS----RGD--HHRNVCIIPVSAH 626 (993)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC---------eEEEcCCCcHHHHHHHHHHHHHHHhc----cCC--CCCCEEEeCCCcC
Confidence 33466778889999999999993 479999888 7777666655321 111 1345899999999
Q ss_pred hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 186 ~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
.+....+.+.|+ +++.||++. +|.+|+++|+++|++.+. ...+|++|+++|..|.++||++|+++|+++|+.
T Consensus 627 ~sn~a~a~~~G~---~vv~v~~d~--~G~vDle~L~~~i~~~~~---~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Gal 698 (993)
T PLN02414 627 GTNPASAAMCGM---KIVVVGTDA--KGNINIEELRKAAEAHKD---NLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQ 698 (993)
T ss_pred ccCHHHHHHCCC---EEEEeccCC--CCCcCHHHHHHHHhccCC---CeEEEEEECCCccccccchHHHHHHHHHHcCCE
Confidence 999999999999 999999975 569999999999985321 135899999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-----ceEEEeeCchhhhhhhcCCcccccCccCCCCC
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-----CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEP 340 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-----~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 340 (502)
++||||+..+.......... ++|+++++.||||+.|.| +|++++++. +.. ..+.+.....
T Consensus 699 v~vDgAq~~a~~~l~~p~~~-----GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~--L~p---~lPg~~v~~~----- 763 (993)
T PLN02414 699 VYMDGANMNAQVGLTSPGFI-----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAP---FLPSHPVVPT----- 763 (993)
T ss_pred EEEEecCHHhccCcCCcccc-----CCCEEEecCCccCCcCcccCCCCeeeEEEchh--hcc---cCCCCccccC-----
Confidence 99999997665332222222 899999999999987765 899988763 221 1222221100
Q ss_pred cccccCCCcccccCCCCC-------CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEE
Q 037144 341 KEQEVGYKDWQITLCRRF-------RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP--RNFSLVC 411 (502)
Q Consensus 341 ~~~~~~~~~~~~~~sr~~-------~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~~~~~v~ 411 (502)
.+.......+..|+++. .++..|..++.+|.+|+++..++...+++|++++|.+..++...++ +.+.-+.
T Consensus 764 -~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv 842 (993)
T PLN02414 764 -GGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFI 842 (993)
T ss_pred -CCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEE
Confidence 00000000011133332 1246688888899999999999999999999999987434333322 2223333
Q ss_pred EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHH
Q 037144 412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAA 491 (502)
Q Consensus 412 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~ 491 (502)
+...+.. + . + ......+.++|.+.|+...+ ..+.....+|++.+.. .+++|||++
T Consensus 843 ~~~~~l~--~-----------~---~-------g~~~~di~krL~d~Gihapt-~~~pv~~~lmiepTE~-~skeelDrf 897 (993)
T PLN02414 843 IDLRPFK--N-----------T---A-------GIEPEDVAKRLMDYGFHAPT-MSWPVPGTLMIEPTES-ESKAELDRF 897 (993)
T ss_pred Eeccccc--c-----------c---c-------CCCHHHHHHHHHHcCcEEee-eccccCCEEEEEeeee-CCHHHHHHH
Confidence 3332110 0 0 0 00024567777777864333 2244567899998755 566799999
Q ss_pred HHHHHHHHHh
Q 037144 492 WTVVQEHLEA 501 (502)
Q Consensus 492 ~~~l~~~~~~ 501 (502)
+++|.++.++
T Consensus 898 ~~al~~i~~e 907 (993)
T PLN02414 898 CDALISIREE 907 (993)
T ss_pred HHHHHHHHHH
Confidence 9999887654
No 49
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.94 E-value=9.3e-24 Score=214.40 Aligned_cols=311 Identities=14% Similarity=0.114 Sum_probs=207.3
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR 199 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~ 199 (502)
++.+.+++++|.+. ..+++||++++..++.+... +++.|+++...|++...+++..|+
T Consensus 55 ~~~e~lA~~~g~~~---------~~i~~g~~~a~~~~~~~l~~-----------~gd~Vl~~~~~h~s~~~~~~~~g~-- 112 (370)
T TIGR02539 55 DFLEDLAEFLGMDE---------ARVTHGAREGKFAVMHALCK-----------EGDWVVLDGLAHYTSYVAAERAGL-- 112 (370)
T ss_pred HHHHHHHHHhCCCc---------eEEECChHHHHHHHHHHhhC-----------CCCEEEECCcccHHHHHHHHHcCC--
Confidence 45566899999874 46789999998776655532 677888999999999999999999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHHHhc-CCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccccc
Q 037144 200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEA-ELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI 278 (502)
Q Consensus 200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~-g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~ 278 (502)
+++.+|.+.+.++.+|+++|+++|++.++. +..+.+|+++++++++|.+.|+++|+++|++||++++||+||+.+.+.
T Consensus 113 -~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~ 191 (370)
T TIGR02539 113 -NVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMP 191 (370)
T ss_pred -EEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcC
Confidence 999999875446889999999999764322 124568888999999999999999999999999999999999876433
Q ss_pred CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-
Q 037144 279 CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR- 357 (502)
Q Consensus 279 ~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~- 357 (502)
.+. .. .++|.++.++|||++.+.++|+++.++. ..........+|..... . .+..+..
T Consensus 192 ~~~-~~-----~~~di~v~s~sK~~~~~g~~G~l~~~~~-~i~~l~~~~~~~~~~~~----------~----~~~~~~~~ 250 (370)
T TIGR02539 192 VSA-KE-----IGADFIVGSGHKSMAASGPCGVLGMSEE-WEDIVLRKSRYSPVKEV----------E----LLGCTSRG 250 (370)
T ss_pred CCH-HH-----cCCCEEEeeCcccccCCCCEEEEEECHH-HHhhhcccccCCcccee----------e----eecccccc
Confidence 221 11 1589999999999987777888877543 32222122222211100 0 0111111
Q ss_pred CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--cCCCeeEEEEEeecCcchhhhhhcccCCCcccc
Q 037144 358 FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA--FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQY 435 (502)
Q Consensus 358 ~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~--~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 435 (502)
..+..++.++... .+.+ +...+..+++++|++.|+++ |++++ .++..+++.+..+....
T Consensus 251 ~~~~~~~~al~~~-~~~l-~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~---------------- 311 (370)
T TIGR02539 251 APIVTMMASFPHV-VERV-KRWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHE---------------- 311 (370)
T ss_pred cHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhH----------------
Confidence 1223333434321 2223 23445566678999999998 79875 35667788776532100
Q ss_pred cccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144 436 RQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF 502 (502)
Q Consensus 436 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~ 502 (502)
.....+.....+.+.|.++|...+.+ ....++|++++ .+ +++|+++++++|+++.+++
T Consensus 312 ----~~~~~~~~~~~~~~~L~e~GI~~ir~---~~~~~iRis~~-~~-t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 312 ----IAQKHKRRGYFLYEELKKRGIHGIRS---GQTKYFKLSVY-GL-TKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred ----HhhhhccccHHHHHHHHhCCCccccC---CcceEEEEEec-CC-CHHHHHHHHHHHHHHHHhc
Confidence 00000112346778888888742222 22458999984 33 6679999999999987653
No 50
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.93 E-value=1e-23 Score=213.14 Aligned_cols=341 Identities=13% Similarity=0.106 Sum_probs=221.2
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHH
Q 037144 83 FPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARD 162 (502)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~ 162 (502)
.|++..++..+.+.+...++. | .+...++..++++.+++++|.++.. -..++++|||+++..++.....
T Consensus 4 ~p~p~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~la~~~~~~~~~-----~~i~~~~~gt~~l~~~~~~~~~ 72 (355)
T TIGR03301 4 TPGPLSTSATVRDAMLVDWCH----W--DSEFNDVTDQVRDRLLALAGGDDNH-----TCVLLQGSGTFAVEATIGSLVP 72 (355)
T ss_pred cCCCCCCCHHHHHHhhhhccC----C--CHHHHHHHHHHHHHHHHHhcCCCCC-----cEEEEeCCcHHHHHHHHHhccC
Confidence 455555556666666553322 2 2334567778999999999997642 1467899999999777765532
Q ss_pred HHHHHhCccCCCCeEEEeCCCCchh-HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec
Q 037144 163 RVLKKIGRENISKLVVYSSDQTHCA-FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV 241 (502)
Q Consensus 163 ~~~~~~~~~~~~~~~v~~s~~~H~s-~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~ 241 (502)
. ++.+++++...|.+ +..+++..|+ +++.++.++ ++.+|+++|++++++.+ ...+|+.++
T Consensus 73 ~----------~~~vi~~~~~~~~~~~~~~a~~~g~---~~~~i~~~~--~~~~d~~~l~~~l~~~~----~~~~v~~~~ 133 (355)
T TIGR03301 73 R----------DGKLLVLINGAYGERLAKICEYLGI---PHTDLNFSE--YEPPDLNRIEEALAADP----DITHVATVH 133 (355)
T ss_pred C----------CCeEEEECCCchhhHHHHHHHHcCC---ceEEEecCC--CCCCCHHHHHHHHHhCC----CceEEEEEe
Confidence 1 23345555444433 5677888999 999999874 35899999999997532 234677888
Q ss_pred CCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhh
Q 037144 242 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLL 321 (502)
Q Consensus 242 gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~ 321 (502)
.+|++|.+.|+++|+++|++||++++||++++.+....+ ... -++|+++.++|||+++|.|+|+++++++. +.
T Consensus 134 ~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~-~~~-----~~~d~~~~s~~K~l~~~~G~g~~~~~~~~-~~ 206 (355)
T TIGR03301 134 HETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPID-IEE-----LDVDALIASANKCLEGVPGFGFVIARRDL-LE 206 (355)
T ss_pred cCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccc-hhh-----cCccEEEecCCcccccCCceeEEEECHHH-HH
Confidence 999999999999999999999999999997765433321 111 16899999999999888889999887543 22
Q ss_pred hhhcCCcccccCccCCCCCcccccCCCcccccCCCCC-----CchHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhc
Q 037144 322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRF-----RSLKLWVVIRNFGVAN-LRNFIRSHVGMAKLFERLVTS 395 (502)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~-----~al~~~~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~ 395 (502)
.......++..+.. ..+... .-....++ ...++..+++.+..+| +.+..++..++++++.+.|++
T Consensus 207 ~~~~~~~~~~~~~~-------~~~~~~--~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~ 277 (355)
T TIGR03301 207 ASAGNARSLYLDLY-------DQWAYM--EKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRA 277 (355)
T ss_pred HhhCCCCCceeeHH-------HHHHHh--hhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHH
Confidence 22111111111100 000000 00011111 1134455677665665 888899999999999999988
Q ss_pred CCCeEEecCCC--ee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEE
Q 037144 396 DKRFEVAFPRN--FS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIY 472 (502)
Q Consensus 396 ~~~~~l~~~~~--~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~ 472 (502)
+ +++++.++. .+ +++|++++.. .....++.+++.++|.++. +.......
T Consensus 278 ~-g~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~l~~~gi~i~-~~~~~~~~ 329 (355)
T TIGR03301 278 L-GFQPLLPERWQSPIIVSFLYPDDP--------------------------DFDFDDFYQELKERGFVIY-PGKLTLAD 329 (355)
T ss_pred c-CCeeecCCCCCCCcEEEEECCCCC--------------------------cchHHHHHHHHHHCCEEEE-CCcccccc
Confidence 7 788765432 23 3456554310 0012466777777886543 33222236
Q ss_pred EEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 473 VLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 473 ~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
++|+++..+ ++++|++++++.|+++
T Consensus 330 ~iRis~~~~-~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 330 TFRIGTIGE-IDAADIERLLEAIKDA 354 (355)
T ss_pred EEEEecCCC-CCHHHHHHHHHHHHhh
Confidence 899997644 6677999999999875
No 51
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.93 E-value=6.9e-24 Score=214.32 Aligned_cols=288 Identities=11% Similarity=0.056 Sum_probs=196.6
Q ss_pred ccccCCCCCCHHHHHHHHHHhhcC---CCCc--ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144 79 YFAYFPATSSVAGIVGEMLSSGFN---VVGL--DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL 153 (502)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~n---~~~~--~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~ 153 (502)
||++...++.++.+ .+.+...+. .+.. .+..+.....+.+++++++++++|.+.+ .+++|+|+|+++
T Consensus 1 yld~a~~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~v~~~~g~t~a~ 72 (353)
T TIGR03235 1 YLDHNATTPIDPAV-AEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE-------EVIFTSGATESN 72 (353)
T ss_pred CCCCCCCCCCCHHH-HHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHHHH
Confidence 45555555544444 444443331 1111 1222334556777899999999999754 589999999998
Q ss_pred HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH---HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc
Q 037144 154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA---QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA 230 (502)
Q Consensus 154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa---~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~ 230 (502)
..++.+...... ..++.+|+++...|+++.... +..|+ +++.||+++ ++.+|+++|+++++++
T Consensus 73 ~~~l~~l~~~~~------~~g~~~vi~~~~~~~s~~~~~~~~~~~G~---~v~~v~~~~--~~~~d~~~l~~~l~~~--- 138 (353)
T TIGR03235 73 NLAILGLARAGE------QKGKKHIITSAIEHPAVLEPIRALERNGF---TVTYLPVDE--SGRIDVDELADAIRPD--- 138 (353)
T ss_pred HHHHHHHHHhcc------cCCCCeeeEcccccHHHHHHHHHHHhcCC---EEEEEccCC--CCcCCHHHHHHhCCCC---
Confidence 877766543200 002368889999999876553 44687 999999875 4689999999988643
Q ss_pred CCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcce
Q 037144 231 ELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCC 310 (502)
Q Consensus 231 g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g 310 (502)
+.+|++++++|++|.+.|+++|+++|+++|+|+|||++++.+..+.+... .++|++++++|||+ +|.|+|
T Consensus 139 ---~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~------~~~D~~~~s~~K~~-gp~g~g 208 (353)
T TIGR03235 139 ---TLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSA------DRIDLISCSGHKIY-GPKGIG 208 (353)
T ss_pred ---CEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccccc------cCCCEEEeehhhcC-CCCceE
Confidence 34888999999999999999999999999999999999988776654221 27999999999985 688999
Q ss_pred EEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC-CCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 037144 311 CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL-CRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKL 388 (502)
Q Consensus 311 ~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~-sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~ 388 (502)
+++++++.... ....+.+..... . ..++. +.. ...+++..+++.+ .++.+++.+++.+++++
T Consensus 209 ~l~~~~~~~~~--~~~~~~~~~~~~-~------------~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~ 272 (353)
T TIGR03235 209 ALVIRKRGKPK--APLKPIMFGGGQ-E------------RGLRPGTLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQ 272 (353)
T ss_pred EEEEccCcccc--cccCceeeCCCC-c------------CccccCCCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHH
Confidence 99998763211 111221111100 0 01111 111 1224555666654 46788899999999999
Q ss_pred HHHHHhcCCCeEEecCCC---eeEEEEEee
Q 037144 389 FERLVTSDKRFEVAFPRN---FSLVCFRVT 415 (502)
Q Consensus 389 l~~~l~~~~~~~l~~~~~---~~~v~f~~~ 415 (502)
+++.|++ +|++++.++. ..+++|.+.
T Consensus 273 l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~ 301 (353)
T TIGR03235 273 LRDALQT-LGVKLNGDPAETIPHILNFSID 301 (353)
T ss_pred HHHHhcc-CCeEEeCCcccccCCEEEEEeC
Confidence 9999988 6999986432 346777654
No 52
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.93 E-value=2.5e-23 Score=223.57 Aligned_cols=388 Identities=11% Similarity=0.042 Sum_probs=248.0
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCCCCCccccc-----CCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHH
Q 037144 52 SPESVETILQDVQEHIVPGITHWQSPNYFAY-----FPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLG 126 (502)
Q Consensus 52 ~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~ 126 (502)
.+.|..++++.+.++-..+..-..+..|+|- .+.....|.-..++.+. .+.. ..+.+.+.-++-.+..+|++
T Consensus 477 ~~~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~~~~p~s~~eF~t~--hPyq-p~e~sQG~lq~i~elq~~l~ 553 (954)
T PRK12566 477 AHHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPEFAQL--HPFA-PREQAEGYRAMIDELEAWLC 553 (954)
T ss_pred cCCCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHHhhhcccchhhhcC--CCCC-chhhhcCHHHHHHHHHHHHH
Confidence 4579999999999987666554444556664 22222233333344433 2221 11335555666666779999
Q ss_pred HhcCCCCccCcCCCCcEEEcC-CchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEE
Q 037144 127 QMLDLPKSFLFSGNGGGVIQG-TTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAI 205 (502)
Q Consensus 127 ~l~g~~~~~~~~~~~~g~~t~-ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v 205 (502)
+++|++.. .+.+ +|+++++.++++.|.....+ |.. .+.+|+++...|.+....+...|+ +++.|
T Consensus 554 eLtGmd~~---------Sl~p~sGA~gE~A~Lmair~yh~~~-Ge~--~r~~vLIp~saHgtNpasa~~~Gi---eVv~V 618 (954)
T PRK12566 554 AITGFDAI---------CMQPNSGAQGEYAGLLAIRRYHRSR-GQS--QRDICLIPSSAHGTNPASAQMAGM---RVVIV 618 (954)
T ss_pred HHHCCCeE---------eecCCchHHHHHHHHHHHHHHHHhc-CCC--CCCEEEecccccccCHHHHHHCCC---EEEEe
Confidence 99999852 4444 78888988888876543322 221 467889999999877777888999 99999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhh
Q 037144 206 KTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF 285 (502)
Q Consensus 206 ~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~ 285 (502)
|+|+ +|.+|+++|++++++.. ....+|+++.+++..+..+|+++|+++|+++|++++||||+.......+.....
T Consensus 619 p~D~--~G~iDle~L~a~I~~~~---~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~ 693 (954)
T PRK12566 619 ECDP--DGNVDLDDLKAKAAAAG---DRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADI 693 (954)
T ss_pred ccCC--CCCcCHHHHHHHhhccC---CCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhc
Confidence 9985 56999999999997321 124578888998888777899999999999999999999997554444332332
Q ss_pred hcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCcc-CCCCCcccccCCCcccccCCCCC-CchHH
Q 037144 286 IDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEA-TDQEPKEQEVGYKDWQITLCRRF-RSLKL 363 (502)
Q Consensus 286 ~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~-~~~~~~~~~~~~~~~~~~~sr~~-~al~~ 363 (502)
++|++++++||||+.|.+.|+.++..-.... .-.+|+.+.. .+. .+.....+.....+.-.+ -++..
T Consensus 694 -----GADi~~~s~HKtf~~P~G~GGP~vG~iav~~----~L~pfLp~~P~~d~--~G~~~r~ga~S~~~~gsa~~l~~A 762 (954)
T PRK12566 694 -----GADVSHMNLHKTFCIPHGGGGPGMGPIGVRA----HLAPFVANHPVVPV--EGPDPNNGAVSAAPWGSASILPIS 762 (954)
T ss_pred -----CCCEEEecCCcccCcCccCCCCccchhhhhh----hhhhhccCCCCcCC--CCCCCCCCceeecccchHHHHHHH
Confidence 8999999999999999999998876521111 0112332211 000 000000000000011010 13567
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC---C-eeEEEEEeecCcchhhhhhcccCCCcccccccc
Q 037144 364 WVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR---N-FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFS 439 (502)
Q Consensus 364 ~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~---~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (502)
|.-++.+|.+ +.+.......+++|++++|.+. +++...+ . +.-+.+...+.. +
T Consensus 763 ~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~--~~v~~~~~~~~~~hEfii~~~~l~--~------------------ 819 (954)
T PRK12566 763 WMYIAMMGPQ-LADASEVAILSANYLANQLGGA--FPVLYRGRNERVAHECILDLRPLK--A------------------ 819 (954)
T ss_pred HHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhh--CCCCcCCCCCCeeeEEEEEccccc--c------------------
Confidence 7788889998 8888888899999999999874 4443322 1 222333332110 0
Q ss_pred hhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 440 EEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 440 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.. ......+.++|.+.|+.... ..+.....+|++.+.. ++++|||+++++|+++.++
T Consensus 820 -~~--g~~~~dvakRL~d~Gihapt-~~fPv~~~LmIepTE~-eskeEIDrf~eAL~~I~~e 876 (954)
T PRK12566 820 -QT--GISEEDVAKRLMDYGFHAPT-MSFPVPGTLMVEPTES-ESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred -cc--CCCHHHHHHHHHHCCcEEeE-EeeccCCEEEEEeeee-CCHHHHHHHHHHHHHHHHH
Confidence 00 00023466677766864332 2344567899998755 5667999999999988764
No 53
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=5.2e-23 Score=208.70 Aligned_cols=344 Identities=13% Similarity=0.113 Sum_probs=245.6
Q ss_pred ccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHH
Q 037144 79 YFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLT 158 (502)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~ 158 (502)
.++.-.+...+|..+.+.+...++.....|..+.+..++.+.+.+++.+.+|++... ..+.++|+|+++|++.++.
T Consensus 32 ~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~----~~eiivt~Ga~~al~~~~~ 107 (393)
T COG0436 32 DLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDP----EEEIIVTAGAKEALFLAFL 107 (393)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCeEEEeCCHHHHHHHHHH
Confidence 344444455667777777777665543256677889999999999999999853221 1259999999999999988
Q ss_pred HHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEE
Q 037144 159 AARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKS-SSYGLSAESVLSQINLDVEAELIPLFL 237 (502)
Q Consensus 159 ~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~-~~~~~d~~~Le~~i~~~~~~g~~p~~V 237 (502)
+..+ +++.|+++++.+.++.....++|. +++.+|++.. .+|.+|+++|+++++++++ +|
T Consensus 108 a~~~-----------pGDeVlip~P~Y~~y~~~~~~~gg---~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk------~i 167 (393)
T COG0436 108 ALLN-----------PGDEVLIPDPGYPSYEAAVKLAGG---KPVPVPLDEEENGFKPDLEDLEAAITPKTK------AI 167 (393)
T ss_pred HhcC-----------CCCEEEEeCCCCcCHHHHHHhcCC---EEEEEeCCcCccCCcCCHHHHHhhcCccce------EE
Confidence 8776 788899999999999999999999 9999998654 3799999999999998665 89
Q ss_pred EEecCCcccccc---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCC-CC-eeEE-ccCCcCC-CCCcce
Q 037144 238 CATVGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEC-VD-SFSF-NPHKWLF-TTLDCC 310 (502)
Q Consensus 238 v~t~gtt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~-aD-si~~-~~hK~l~-~p~~~g 310 (502)
+++.|+|+||++ +.+++|+++|++||+|++.|.+|....+....+...+. +.. .| .|++ +++|.++ +.+.+|
T Consensus 168 ~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~-~~~~~~~~i~i~s~SK~~~mtGwRvG 246 (393)
T COG0436 168 ILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILE-LAGARDRTITINSFSKTYGMTGWRIG 246 (393)
T ss_pred EEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhh-cCCCcceEEEEeccccccccccccee
Confidence 999999999999 55889999999999999999999887654321222221 112 12 5555 5999997 557788
Q ss_pred EEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc----HHHHHHHHHHHHHHH
Q 037144 311 CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG----VANLRNFIRSHVGMA 386 (502)
Q Consensus 311 ~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g----~~g~~~~~~~~~~la 386 (502)
+++..++... +.+.....|+.. |. ..+...++..++. .+..+.+.+.+.+++
T Consensus 247 ~~v~~~~~l~-~~~~~~~~~~~~--------------------~~---~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rr 302 (393)
T COG0436 247 WVVGPPEELI-AALRKLKSYLTS--------------------CA---PTPAQYAAIAALNGPQSDEVVEEMREEYRERR 302 (393)
T ss_pred EeecChHHHH-HHHHHHHHhccc--------------------CC---CHHHHHHHHHHhcCccchHHHHHHHHHHHHHH
Confidence 8877644333 222211122211 11 2233344444442 246677778899999
Q ss_pred HHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee
Q 037144 387 KLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA 466 (502)
Q Consensus 387 ~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 466 (502)
+.+.+.|.+++|+++..+|...+..|.-.+... ...+++++|.++..+.+.|+
T Consensus 303 d~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~~---------------------------d~~~f~~~Ll~~~gV~v~PG 355 (393)
T COG0436 303 DLLVEALNEIGGLSVVKPPEGAFYLFPKIPELL---------------------------DSEEFAKKLLEEAGVAVVPG 355 (393)
T ss_pred HHHHHHHHhcCCeeeccCCCeeEEEEeecCCCC---------------------------CHHHHHHHHHHhCCEEEecc
Confidence 999999999989999876877777776554310 02355666665554444444
Q ss_pred -eEC---CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 467 -IVG---GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 467 -~~~---g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.++ |.+++|+|++. ++++++++++.+.+..+.
T Consensus 356 ~~Fg~~~g~~~vRis~~~---~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 356 SGFGEPPGEGYVRLSLAT---SEETLEEALRRLARFLAE 391 (393)
T ss_pred cccCCCCCCCeEEEEEec---CHHHHHHHHHHHHHHHHh
Confidence 443 45799999874 447999999999887664
No 54
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.93 E-value=2.5e-23 Score=211.49 Aligned_cols=348 Identities=13% Similarity=0.089 Sum_probs=223.8
Q ss_pred cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHH
Q 037144 82 YFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR 161 (502)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~ 161 (502)
+.|++..++..+.+.+...+ ..| ++.+.+...++++.+++++|.+++. ...+++++||+++..++....
T Consensus 9 ~~pgP~~~~~~~~~a~~~~~----~~~--~~~~~~~~~~~~~~l~~l~~~~~~~-----~~i~~~~~gt~~l~~~~~~l~ 77 (368)
T PRK13479 9 LTPGPLTTSRTVREAMLRDW----GSW--DDDFNALTASVRAKLVAIATGEEGY-----TCVPLQGSGTFSVEAAIGSLV 77 (368)
T ss_pred ecCCCCCCCHHHHHHhCCCC----CCC--ChHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCCcHHHHHHHHHhcc
Confidence 44555444444444443322 222 3445567788999999999986431 146789999999877766553
Q ss_pred HHHHHHhCccCCCCeEEEeCCCCchhH--HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEE
Q 037144 162 DRVLKKIGRENISKLVVYSSDQTHCAF--QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCA 239 (502)
Q Consensus 162 ~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~ 239 (502)
. +++.+++....++.. .+.++..|+ +++.||.++ ++.+|++++++++++..+ ..+|.+
T Consensus 78 ~-----------~~~~vlv~~~~~~~~~~~~~~~~~g~---~~~~i~~~~--~~~~d~~~l~~~l~~~~~----~~~v~~ 137 (368)
T PRK13479 78 P-----------RDGKVLVPDNGAYGARIAQIAEYLGI---AHVVLDTGE--DEPPDAAEVEAALAADPR----ITHVAL 137 (368)
T ss_pred C-----------CCCeEEEEeCCchHHHHHHHHHHcCC---cEEEEECCC--CCCCCHHHHHHHHHhCCC----CcEEEE
Confidence 2 344455544555543 578888999 999999975 358999999999875421 236888
Q ss_pred ecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchh
Q 037144 240 TVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSC 319 (502)
Q Consensus 240 t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~ 319 (502)
++++|++|.+.|+++|+++|+++|++++||++++.+..+.+ ... .++|.+++++|||+++|.|.|+++++++.
T Consensus 138 ~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~-~~~-----~~~d~~v~s~~K~l~g~~G~G~l~~~~~~- 210 (368)
T PRK13479 138 VHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPID-IAE-----LGIDALISSANKCIEGVPGFGFVIARRSE- 210 (368)
T ss_pred EcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCcccc-ccc-----cCceEEEecCccccccCCCceEEEECHHH-
Confidence 99999999999999999999999999999987755443322 111 16899999999999999999999987543
Q ss_pred hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCC
Q 037144 320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERLVTSDK 397 (502)
Q Consensus 320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~ 397 (502)
+........+|..+.... .........+.+ +.. .....+..+++.+..+ ++.++++++.++++++++.|+++
T Consensus 211 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~- 284 (368)
T PRK13479 211 LEACKGNSRSLSLDLYDQ---WAYMEKTGQWRF--TPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL- 284 (368)
T ss_pred HHHhhcCCCCeeecHHHH---HhhhcccCCCCC--CCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-
Confidence 222211112221110000 000000000000 111 1223556677666444 47888899999999999999998
Q ss_pred CeEEecCC--Cee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEE
Q 037144 398 RFEVAFPR--NFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVL 474 (502)
Q Consensus 398 ~~~l~~~~--~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~l 474 (502)
|++++.++ ..+ +++|...... .....++.++|.++|.++. +.......++
T Consensus 285 g~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~~L~~~gi~v~-~g~~~~~~~i 337 (368)
T PRK13479 285 GFEPLLDAEIQSPIIVTFHAPADP--------------------------AYDFKEFYERLKEQGFVIY-PGKLTQVDTF 337 (368)
T ss_pred CCcccCCchhcCceEEEEECCCCC--------------------------CcCHHHHHHHHHHCCEEEe-cCCCCCCCEE
Confidence 78876443 222 4566543211 0012467778888887543 3222224579
Q ss_pred EEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 475 RFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 475 R~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
|++++.+ ++++|+++++++|+++.++
T Consensus 338 Ris~~~~-~t~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 338 RIGCIGD-VDAADIRRLVAAIAEALYW 363 (368)
T ss_pred EEecCCC-CCHHHHHHHHHHHHHHHHH
Confidence 9987544 5677999999999988765
No 55
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.92 E-value=6.2e-23 Score=226.36 Aligned_cols=326 Identities=11% Similarity=-0.015 Sum_probs=209.8
Q ss_pred HHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhc-----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCc
Q 037144 60 LQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGF-----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKS 134 (502)
Q Consensus 60 l~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~ 134 (502)
++.++..-+|.... -.||++..+++.++..+.+++..++ |+. ..+..+..++++-.++++.+++++|.+..
T Consensus 21 ~~~~R~~~fp~l~~---~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~-s~~~~s~~~~~~~e~aR~~ia~~lga~~~ 96 (805)
T PLN02724 21 IDELRATEFARLKG---VVYLDHAGATLYSESQLEAALADFSSNVYGNPH-SQSDSSMRSSDTIESARQQVLEYFNAPPS 96 (805)
T ss_pred HHHHHHHHhhhcCC---CEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCC-cCcchhhhHHHHHHHHHHHHHHHhCCCcc
Confidence 44555333444322 3688888777666666766655443 222 23344555677777899999999999653
Q ss_pred cCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH---HHHHHcCCCCCCEEEEecCCC-
Q 037144 135 FLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ---KAAQIVGIDRKNIRAIKTTKS- 210 (502)
Q Consensus 135 ~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~---~aa~~~Glg~~~v~~v~~~~~- 210 (502)
. -.++||+|+|+|+......... .+++.|+++...|.|+. +.++..|+ +++.+|++..
T Consensus 97 ~-----~~VvFtsnaT~alnlva~~l~~----------~~gd~Iv~t~~eH~svl~~~~~a~~~G~---~v~~v~~~~~~ 158 (805)
T PLN02724 97 D-----YACVFTSGATAALKLVGETFPW----------SSESHFCYTLENHNSVLGIREYALEKGA---AAIAVDIEEAA 158 (805)
T ss_pred c-----eEEEEeCChHHHHHHHHHHCCC----------CCCCeEEEeeccccchHHHHHHHHHcCC---eEEeccchhcc
Confidence 1 0479999999997654332210 14667888888997754 34445688 9999988621
Q ss_pred -----CCcccCH--HHHHHHHHHHH----hcCCccEEEEEecCCccccccCChhHHHHHHHHh-------C-CEEEeecc
Q 037144 211 -----SSYGLSA--ESVLSQINLDV----EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF-------G-IWVHVDAA 271 (502)
Q Consensus 211 -----~~~~~d~--~~Le~~i~~~~----~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~-------g-~~lhVDaA 271 (502)
+.+.+++ ++|++.+++.. ..+..+.+|++++.+|.+|.+.||++|..+++.. | ++++||||
T Consensus 159 ~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaa 238 (805)
T PLN02724 159 NQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAA 238 (805)
T ss_pred ccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehh
Confidence 1234444 66776643111 1112335899999999999999999876655532 3 57999999
Q ss_pred cccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCC-Cccc---ccCC
Q 037144 272 YAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE-PKEQ---EVGY 347 (502)
Q Consensus 272 ~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~-~~~~---~~~~ 347 (502)
++.+..+.+-.+ + ++|++++++|||++.|.|+|++++|+... . .+ .+.|......... .... ....
T Consensus 239 Q~~g~~piDv~~-~-----~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~-~-~l--~p~~~GGg~~~~~~~~~~~~~~~~~ 308 (805)
T PLN02724 239 KGCGTSPPDLSR-Y-----PADFVVVSFYKIFGYPTGLGALLVRRDAA-K-LL--KKKYFGGGTVAASIADIDFVKRRER 308 (805)
T ss_pred hhcCCCCCChhh-c-----CCCEEEEecceeccCCCCceEEEEehhhh-h-hh--cCCccCCCceEEEecccceeecccc
Confidence 999988775322 2 79999999999999999999999986532 1 11 2333322110000 0000 0000
Q ss_pred CcccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC------CeEEecCC--------CeeEEE
Q 037144 348 KDWQITLCRR--FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK------RFEVAFPR--------NFSLVC 411 (502)
Q Consensus 348 ~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~------~~~l~~~~--------~~~~v~ 411 (502)
....++.+.. ...+++..+++.+-..|++++.++...|++++.+.|++++ +++++++. +.++|+
T Consensus 309 ~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivs 388 (805)
T PLN02724 309 VEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVT 388 (805)
T ss_pred HHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEE
Confidence 1112333322 2335667788877666888899999999999999999886 58887643 467999
Q ss_pred EEeecC
Q 037144 412 FRVTPS 417 (502)
Q Consensus 412 f~~~~~ 417 (502)
|.+...
T Consensus 389 Fnv~~~ 394 (805)
T PLN02724 389 FNLKRA 394 (805)
T ss_pred EEEEcC
Confidence 998753
No 56
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.92 E-value=4.3e-23 Score=214.43 Aligned_cols=310 Identities=10% Similarity=0.057 Sum_probs=201.1
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEc---CCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQ---GTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC 186 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t---~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~ 186 (502)
.......+|..+++.++++||.+.+ ..+++ +||+++|+.++.+... +++.|+++...|.
T Consensus 74 g~~~~~~iE~~ar~~~a~lf~a~~~-------~~~~~~~~~sgt~an~~v~~al~~-----------~gd~Ii~~~~ehg 135 (452)
T PTZ00094 74 GNEVVDKIENLCQKRALEAFGLDPE-------EWGVNVQPYSGSPANFAVYTALLQ-----------PHDRIMGLDLPSG 135 (452)
T ss_pred cchHHHHHHHHHHHHHHHHhCCCcc-------cceeecCCCchHHHHHHHHHHhcC-----------CCCEEEecccccC
Confidence 3344577887789999999999653 22344 7899999887766532 5778889988997
Q ss_pred hHHHHHHH--------cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHH
Q 037144 187 AFQKAAQI--------VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDV 258 (502)
Q Consensus 187 s~~~aa~~--------~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i 258 (502)
+....+.. .|.+. .+..++++. +|.+|+++|++++++.+ |.+|+++ .+.+|.+.|+++|+++
T Consensus 136 ~~l~~~~~l~~~~~~~~~~~~-~~~~~~~~~--~g~id~~~L~~~l~~~~-----~~lvi~~--~s~~g~~~di~~I~~i 205 (452)
T PTZ00094 136 GHLTHGFYTAKKKVSATSIYF-ESLPYQVNE--KGLIDYDKLEELAKAFR-----PKLIIAG--ASAYPRDIDYKRFREI 205 (452)
T ss_pred Ccccccccccccccccceeee-eeeecccCC--CCCcCHHHHHHHHHHhC-----CCEEEEe--CCCCCCccCHHHHHHH
Confidence 75443211 11100 344555664 47999999999997532 2245443 4469999999999999
Q ss_pred HHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCC
Q 037144 259 AKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQ 338 (502)
Q Consensus 259 ~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~ 338 (502)
|+++|+++|||+||+.+.+..+.... .+.++|++++++|||+++|.| |++++++.. ...........+..
T Consensus 206 ~~~~ga~l~vDaaq~~G~i~~~~~~~---~~~~~D~l~~S~hK~l~GP~G-g~l~~~~~~-~~~l~~~~~~~~~p----- 275 (452)
T PTZ00094 206 CDSVGAYLMADIAHTSGLVAAGVLPS---PFPYADVVTTTTHKSLRGPRS-GLIFYRKKV-KPDIENKINEAVFP----- 275 (452)
T ss_pred HHHcCCEEEEeccchhccccCCCCCC---CCCCCcEEEcCCccCCCCCCc-eEEEEeccc-chHHHHhhccccCC-----
Confidence 99999999999999998876542221 123799999999999999997 777776542 11100000000100
Q ss_pred CCcccccCCCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC---CeeEEEEEe
Q 037144 339 EPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR---NFSLVCFRV 414 (502)
Q Consensus 339 ~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~---~~~~v~f~~ 414 (502)
.++++-. ....++..+++.+...+++++.++..+++++|.+.|.+. |+++..+. ...++.|..
T Consensus 276 ------------~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~~ 342 (452)
T PTZ00094 276 ------------GLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GYDLVTGGTDNHLVLVDLRP 342 (452)
T ss_pred ------------CCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCCCceEeecCCc
Confidence 0111111 133456667777656677888899999999999999886 89887532 223333332
Q ss_pred ecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-----CEEEEEEEecCCCCc----H
Q 037144 415 TPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG-----GIYVLRFAAGNSMTM----E 485 (502)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----g~~~lR~~~~~~~t~----~ 485 (502)
.+.. ...+...|.+.|+.+-..+... ....+|+++.. .|+ +
T Consensus 343 ~~~~-----------------------------~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~-~tt~g~~~ 392 (452)
T PTZ00094 343 FGIT-----------------------------GSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPA-LTTRGAKE 392 (452)
T ss_pred CCCC-----------------------------HHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHH-HHhCCCCH
Confidence 2211 2344555555576432221111 23689999854 454 8
Q ss_pred HHHHHHHHHHHHHHH
Q 037144 486 SHVRAAWTVVQEHLE 500 (502)
Q Consensus 486 ~di~~~~~~l~~~~~ 500 (502)
+||+++++.|.++++
T Consensus 393 ~di~~l~~~l~~~~~ 407 (452)
T PTZ00094 393 KDFKFVADFLDRAVK 407 (452)
T ss_pred HHHHHHHHHHHHHHH
Confidence 899999999998775
No 57
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.92 E-value=9e-23 Score=202.82 Aligned_cols=339 Identities=15% Similarity=0.120 Sum_probs=232.5
Q ss_pred CCCCCCCCCcccccCCCCCCHHHHHHHHHHhh-cCCCC--cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE
Q 037144 69 PGITHWQSPNYFAYFPATSSVAGIVGEMLSSG-FNVVG--LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI 145 (502)
Q Consensus 69 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~n~~~--~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~ 145 (502)
+...+|.+-.|+|.-..+. ....+.+.+..+ ....+ ......+...++| +.|++++|.+. .++
T Consensus 39 ~~~~nf~SNdYLGLa~~~~-~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE----~~lA~f~g~e~---------al~ 104 (388)
T COG0156 39 RKVLNFCSNDYLGLASHPE-LIEAAKAAIRRYGVGAGGSRLISGTSDLHVELE----EELADFLGAEA---------ALL 104 (388)
T ss_pred ceeEeeeccCcccccCCHH-HHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCc---------EEE
Confidence 3446677888999854322 222222223221 11111 1122333444455 55788888875 466
Q ss_pred cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHH
Q 037144 146 QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQIN 225 (502)
Q Consensus 146 t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~ 225 (502)
.++|-.||+..+.+... ++++|+..+..|.|+.+++++.+. +++..+. .|+++||+.|+
T Consensus 105 f~SGy~AN~~~i~~l~~-----------~~dli~~D~lnHASiidG~rls~a---~~~~f~H-------nD~~~Le~~l~ 163 (388)
T COG0156 105 FSSGFVANLGLLSALLK-----------KGDLIFSDELNHASIIDGIRLSRA---EVRRFKH-------NDLDHLEALLE 163 (388)
T ss_pred EcccchhHHHHHHHhcC-----------CCcEEEEechhhhhHHHHHHhCCC---cEEEecC-------CCHHHHHHHHH
Confidence 66778889766655543 688999999999999999999998 9998875 48899999999
Q ss_pred HHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhc--CC--CCCCeeEEccCC
Q 037144 226 LDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID--GV--ECVDSFSFNPHK 301 (502)
Q Consensus 226 ~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~--~~--~~aDsi~~~~hK 301 (502)
+....+.++.+|+.....++.|.+.||++|.++|++|++|+.||.||+.+.+- +..+.... |+ ...|+++.++.|
T Consensus 164 ~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G-~~GrG~~e~~g~~~~~vdi~~gTlsK 242 (388)
T COG0156 164 EARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLG-PNGRGLAEHFGLEPEEVDIIVGTLGK 242 (388)
T ss_pred hhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccC-CCCccHHHHhCCCCccceEEEEEchh
Confidence 86543335678888899999999999999999999999999999999887763 33333322 33 345899999999
Q ss_pred cCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHH
Q 037144 302 WLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRS 381 (502)
Q Consensus 302 ~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~ 381 (502)
.|+ ..|.++.-+............+|+++.... +..+.++..+++.+ +...++.++
T Consensus 243 AlG---s~Gg~v~g~~~~~d~L~~~ar~~ifStalp-------------------P~~aaa~~~al~~l--~~~~~~r~~ 298 (388)
T COG0156 243 ALG---SSGGYIAGSAALIDYLRNRARPFIFSTALP-------------------PAVAAAALAALRIL--EEGPERRER 298 (388)
T ss_pred hhc---ccCceeeCcHHHHHHHHHhCCceeccCCCC-------------------HHHHHHHHHHHHHH--HhCHHHHHH
Confidence 997 355555555544332334456777764321 12333445566654 344677888
Q ss_pred HHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE
Q 037144 382 HVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV 461 (502)
Q Consensus 382 ~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 461 (502)
..++..++++.+... ++.+. +..++++.+.+.+ +....++.+.+.++|+.
T Consensus 299 L~~~~~~~~~~~~~~-~~~~~-~s~s~I~pv~~gd----------------------------~~~a~~~s~~l~~~Gi~ 348 (388)
T COG0156 299 LQELAAFFRSLLKAL-GLVLL-PSESPIIPVILGD----------------------------EERALEASRALLEEGIY 348 (388)
T ss_pred HHHHHHHHHHHHHhc-CCccC-CCCCCeeeeEeCC----------------------------HHHHHHHHHHHHHCCee
Confidence 899999999777665 66653 5667788777754 23356677777778763
Q ss_pred ---EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 462 ---FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 462 ---~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
+..|++..|...||++++..+ +++||+++++++.++
T Consensus 349 v~~i~~PTVp~gtarlRi~lta~h-t~~~I~~l~~~l~~~ 387 (388)
T COG0156 349 VSAIRPPTVPKGTARLRITLTAAH-TEEDIDRLAEALSEV 387 (388)
T ss_pred EeeecCCCCCCCcceEEEEecCCC-CHHHHHHHHHHHHhh
Confidence 334566678889999998666 556999999999875
No 58
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.91 E-value=7.8e-23 Score=207.86 Aligned_cols=340 Identities=11% Similarity=-0.033 Sum_probs=214.9
Q ss_pred ccCCCCCCHHHH-HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEc-CCchHHHHHHHH
Q 037144 81 AYFPATSSVAGI-VGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQ-GTTCEALLCTLT 158 (502)
Q Consensus 81 ~~~~~~~~~~~~-~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t-~ggt~a~~~al~ 158 (502)
.|.+++..++.. +.+.+...+- .....++.+.++.+++++.+++++|.++.. ..+|+ +|||+++..++.
T Consensus 15 ~f~~Gp~~~~~~~v~~a~~~~~~---~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~------~v~~~~gs~T~~~~~~~~ 85 (378)
T PRK03080 15 RFSSGPCKKRPGWQLEALADALL---GRSHRQKPVKALLKRVIEGTRELLSLPEGY------EVGIVPGSDTGAWEMALW 85 (378)
T ss_pred CcCCCCcCCChHHHHHHHHhhhc---ccCcCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCchHHHHHHHHH
Confidence 345555444433 5555543321 111234677888899999999999996542 46766 588888765554
Q ss_pred HHHHHHHHHhCccCCCCeEEEeCCCCchhHHH--HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEE
Q 037144 159 AARDRVLKKIGRENISKLVVYSSDQTHCAFQK--AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLF 236 (502)
Q Consensus 159 ~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~--aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~ 236 (502)
.... .++..+++ ...|.+-+. +++.+|+. +++.++.+++ ...|+++++. ++ .
T Consensus 86 ~l~~----------~~~~~vi~-~g~f~~~~~~~~~~~~g~~--~v~~~~~~~g--~~~d~~~i~~-----~~------~ 139 (378)
T PRK03080 86 SLLG----------ARRVDHLA-WESFGSKWATDVVKQLKLE--DPRVLEADYG--SLPDLSAVDF-----DR------D 139 (378)
T ss_pred hcCC----------CCcceEEE-eCHHHHHHHHHHHhhcCCC--CceEeccCCC--CCCCHhhcCC-----CC------C
Confidence 3311 02344444 346665333 33555652 6778887653 3778776432 21 5
Q ss_pred EEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeC
Q 037144 237 LCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKD 316 (502)
Q Consensus 237 Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~ 316 (502)
|++++.+|.+|.+.|+++|++ +++|++++||++++.+..+.+-. .+|++++++|||+++|.|+|++++++
T Consensus 140 V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~--------~iD~~~~s~~K~l~~P~G~g~l~v~~ 209 (378)
T PRK03080 140 VVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWS--------KLDVYTFSWQKVLGGEGGHGMAILSP 209 (378)
T ss_pred EEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHH--------HCcEEEEehhhhCCCCCceEEEEECH
Confidence 889999999999999999999 88999999999999998877632 47999999999999999999999986
Q ss_pred chhhhhhhcCC-----cccccCccCCCCCcccccCCCcccccCCCCC--C---chHHHHHHHHhcHH-HHHHHHHHHHHH
Q 037144 317 PSCLLSTLSTN-----PQYLKNEATDQEPKEQEVGYKDWQITLCRRF--R---SLKLWVVIRNFGVA-NLRNFIRSHVGM 385 (502)
Q Consensus 317 ~~~l~~~~~~~-----~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~--~---al~~~~~l~~~g~~-g~~~~~~~~~~l 385 (502)
+.. ...-... +.|+.-... ........+.+... . ...+..+++.+-.+ |++++.+++.++
T Consensus 210 ~~~-~~~~p~~~~~~~~~~~~~~~~--------~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l 280 (378)
T PRK03080 210 RAV-ERLESYTPARPIPKFFRLTKG--------GKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAAN 280 (378)
T ss_pred HHH-HhhhcccCCCCCchhheeccc--------hHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 543 2111111 112110000 00000011111111 1 12345678877776 899999999999
Q ss_pred HHHHHHHHhcCCCeEEecC-C--Ce-eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE
Q 037144 386 AKLFERLVTSDKRFEVAFP-R--NF-SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV 461 (502)
Q Consensus 386 a~~l~~~l~~~~~~~l~~~-~--~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 461 (502)
++++++.|+++++++++.+ + .. .+++|++++.. .....++..++.++|.+
T Consensus 281 ~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~--------------------------~~~~~~~~~~l~~~~i~ 334 (378)
T PRK03080 281 ASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQ--------------------------AAVDAAAVAKLLRENGA 334 (378)
T ss_pred HHHHHHHHHhCCCcccccCCccccCccEEEEEcCCch--------------------------HHHHHHHHHHHHHcCCe
Confidence 9999999999987887642 2 23 47788764310 01122345555556654
Q ss_pred EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 462 FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 462 ~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+..+......+.+|+|++ .+++++||++++++|+++.++
T Consensus 335 v~~g~~~~~~~~vRis~~-~~~t~~di~~l~~al~~~~~~ 373 (378)
T PRK03080 335 VDIEPYRDAPNGLRIWCG-PTVEPADVEALTPWLDWAFER 373 (378)
T ss_pred eccccccCCCCcEEEecC-CCCCHHHHHHHHHHHHHHHHH
Confidence 332221112468999976 567788999999999987654
No 59
>PLN02721 threonine aldolase
Probab=99.91 E-value=2.1e-22 Score=203.48 Aligned_cols=306 Identities=15% Similarity=0.136 Sum_probs=193.4
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
.+|...++|+. +++++|.+ .++++++||++++.++.+.... +++.|++++.+|+++.
T Consensus 38 ~~~~~~~l~~~----la~~~~~~---------~~~~~~~Gs~a~~~~l~~~~~~----------~gd~Vl~~~~~~~~~~ 94 (353)
T PLN02721 38 YDPTALRLEEE----MAKIFGKE---------AALFVPSGTMGNLISVLVHCDV----------RGSEVILGDNSHIHLY 94 (353)
T ss_pred CCHHHHHHHHH----HHHHhCCc---------eeEEecCccHHHHHHHHHHccC----------CCCeEEEcCccceehh
Confidence 34555566655 56666654 2578888899988777665431 5678889999998877
Q ss_pred H---HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC-CccEEEEEec-CCccccccCC---hhHHHHHHHH
Q 037144 190 K---AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE-LIPLFLCATV-GTTAITAVDP---LKPLCDVAKQ 261 (502)
Q Consensus 190 ~---aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g-~~p~~Vv~t~-gtt~~G~idp---l~eI~~i~~~ 261 (502)
+ .+...|+ +++.+|.++ ++.+|+++|+++|++....+ ..+.+|+++. .++++|.+-| +++|.++|++
T Consensus 95 ~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~ 169 (353)
T PLN02721 95 ENGGISTLGGV---HPRTVKNNE--DGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKR 169 (353)
T ss_pred cccchhhhcCc---eeEecCCCc--CCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHH
Confidence 6 4677888 999999864 46899999999997432111 1344666655 4566787644 8899999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144 262 FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK 341 (502)
Q Consensus 262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 341 (502)
+|+++|+|+||..+....... .......++|++++++|||++.| .|++++.+++.... +.....+..
T Consensus 170 ~g~~livD~a~~~~~~~~~~~-~~~~~~~~~d~~~~s~sK~l~~~--~G~~~~~~~~~~~~-~~~~~~~~~--------- 236 (353)
T PLN02721 170 HGLKLHIDGARIFNASVALGV-PVHRLVKAADSVSVCLSKGLGAP--VGSVIVGSKSFIRK-AKRLRKTLG--------- 236 (353)
T ss_pred cCCEEEEEchhhhcchhhhCC-CHHHHhhhCCEEEEecccccCCc--eeeEEecCHHHHHh-HHHHHHhcC---------
Confidence 999999999874322111111 11111237899999999999876 44444455544321 111000000
Q ss_pred ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-ecCCCeeEEEEEeecCcch
Q 037144 342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV-AFPRNFSLVCFRVTPSAVM 420 (502)
Q Consensus 342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l-~~~~~~~~v~f~~~~~~~~ 420 (502)
++.+........++..+ +...+.+++..++++++.+.|++++++++ +.++..+++.+++....
T Consensus 237 ------------~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-- 300 (353)
T PLN02721 237 ------------GGMRQVGVLAAAALVAL--QENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGS-- 300 (353)
T ss_pred ------------CCeehhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCc--
Confidence 00000111111122211 22223345556788999999999988876 55666777777764310
Q ss_pred hhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
......++++|.+.|..+... +..++|++++ +..+++|+++++++|++++.
T Consensus 301 ------------------------~~~~~~~~~~L~~~gi~v~~~----~~~~lR~~~~-~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 301 ------------------------RITAEKLCKSLEEHGVLLMPG----NSSRIRVVTH-HQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred ------------------------cccHHHHHHHHHhCCcEEecC----CCceEEEEec-CcCCHHHHHHHHHHHHHHhh
Confidence 001346777787778754433 3568999985 45678899999999998876
Q ss_pred h
Q 037144 501 A 501 (502)
Q Consensus 501 ~ 501 (502)
.
T Consensus 352 ~ 352 (353)
T PLN02721 352 T 352 (353)
T ss_pred c
Confidence 4
No 60
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.91 E-value=9.1e-22 Score=201.81 Aligned_cols=300 Identities=11% Similarity=0.061 Sum_probs=197.7
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
..+..++.+.+++++|.+ .+++++||++|+..++.+... +++.|+++...|.++..++++
T Consensus 82 ~~~~~~le~~ia~~~g~~---------~~ii~~~~~~a~~~~~~~l~~-----------~gd~vi~~~~~~~s~~~~~~~ 141 (393)
T TIGR01822 82 QDIHKELEAKIAAFLGTE---------DTILYASCFDANGGLFETLLG-----------AEDAIISDALNHASIIDGVRL 141 (393)
T ss_pred hHHHHHHHHHHHHHhCCC---------cEEEECchHHHHHHHHHHhCC-----------CCCEEEEeccccHHHHHHHHh
Confidence 344455667788888874 357778889998755544322 678899999999999999888
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144 195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 274 (502)
Q Consensus 195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~ 274 (502)
.+. ..+.++ .+|+++|+++|++..+.+.++.+|+.....+++|.+.|+++|+++|++||+|+++|++|+.
T Consensus 142 ~~~---~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~ 211 (393)
T TIGR01822 142 CKA---KRYRYA-------NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHAT 211 (393)
T ss_pred cCC---ceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccc
Confidence 887 654443 4799999999987543333456788777889999999999999999999999999999965
Q ss_pred ccccCccchhh--hcCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc
Q 037144 275 SACICPEFRHF--IDGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ 351 (502)
Q Consensus 275 ~~~~~~~~~~~--~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 351 (502)
+.+... .... ..++ .++|.++.++||+++++ ..|+++.+ +............|...
T Consensus 212 g~~~~~-~~~~~~~~~~~~~~di~~~s~sK~l~g~-r~G~~~~~-~~~~~~l~~~~~~~~~~------------------ 270 (393)
T TIGR01822 212 GFLGPT-GRGSHELCGVMGRVDIITGTLGKALGGA-SGGFTTAR-KEVVELLRQRSRPYLFS------------------ 270 (393)
T ss_pred cCcCCC-CCchHHhcCCCCCCeEEEEEChHHhhCC-CcEEEEeC-HHHHHHHHHhCccceec------------------
Confidence 543211 1110 1122 26899999999998754 45776653 33322211111122111
Q ss_pred ccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCC
Q 037144 352 ITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNG 430 (502)
Q Consensus 352 ~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 430 (502)
++... ...++..+++.+ +..+++.++..++++++.+.|++. ++++. ++..+++.+...+
T Consensus 271 --~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~-------------- 330 (393)
T TIGR01822 271 --NSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAA-GFDIK-PADHPIIPVMLYD-------------- 330 (393)
T ss_pred --CCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC--------------
Confidence 11111 112233344433 335667788899999999999886 78765 3345566554432
Q ss_pred CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE----CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV----GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.....++.+.|.++|.. +.+..+ .+...+|++++ ..++++||+++++.|+++.++
T Consensus 331 --------------~~~~~~l~~~L~~~gI~-v~~~~~~~~~~~~~~iRis~~-~~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 331 --------------AVLAQRFARRLLEEGIY-VTGFFYPVVPKGQARIRVQIS-AAHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred --------------HHHHHHHHHHHHHCCee-EeeeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHH
Confidence 11235677788888854 333222 24457999986 456677999999999998764
No 61
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.91 E-value=5.7e-22 Score=199.53 Aligned_cols=318 Identities=16% Similarity=0.080 Sum_probs=213.1
Q ss_pred hhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEE
Q 037144 99 SGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVV 178 (502)
Q Consensus 99 ~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v 178 (502)
...+.+...|...++..++++.+.+++...+|.+... ...++++|+|+++..++.+... ++++|
T Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~-----~~~~~~~~~t~a~~~~~~~~~~-----------~g~~v 86 (350)
T cd00609 23 AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPP-----EEIVVTNGAQEALSLLLRALLN-----------PGDEV 86 (350)
T ss_pred HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc-----ceEEEecCcHHHHHHHHHHhCC-----------CCCEE
Confidence 4455555667777888999999999999988753321 2578899999988776665532 56789
Q ss_pred EeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCH--HHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHH
Q 037144 179 YSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSA--ESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLC 256 (502)
Q Consensus 179 ~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~--~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~ 256 (502)
+++...|.++..+++..|. +++.+|+++. +.++. +.++..+.+ .+.+|+++.+++++|.+.|++++.
T Consensus 87 l~~~~~~~~~~~~~~~~~~---~~~~i~~~~~--~~~~~~~~~~~~~~~~------~~~~v~i~~~~~~tG~~~~~~~l~ 155 (350)
T cd00609 87 LVPDPTYPGYEAAARLAGA---EVVPVPLDEE--GGFLLDLELLEAAKTP------KTKLLYLNNPNNPTGAVLSEEELE 155 (350)
T ss_pred EEcCCCchhHHHHHHHCCC---EEEEEecccc--cCCccCHHHHHhhcCc------cceEEEEECCCCCCCcccCHHHHH
Confidence 9999999999999999999 9999999864 34544 555544432 245788888999999999866665
Q ss_pred ---HHHHHhCCEEEeecccccccccCccchh-hhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccc
Q 037144 257 ---DVAKQFGIWVHVDAAYAGSACICPEFRH-FIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYL 331 (502)
Q Consensus 257 ---~i~~~~g~~lhVDaA~g~~~~~~~~~~~-~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl 331 (502)
++|+++|+|+|+|+||+++......... ...+....|.+..++||+++ .+.++|++++++..... .+.....+.
T Consensus 156 ~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~-~~~~~~~~~ 234 (350)
T cd00609 156 ELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLE-RLKKLLPYT 234 (350)
T ss_pred HHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHH-HHHHHHHhc
Confidence 8999999999999999876643221100 01122357888899999998 55678888876643332 222111111
Q ss_pred cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEE
Q 037144 332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVC 411 (502)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~ 411 (502)
.. .........++.+++.. .+++.++.++..++++++.+.|++.+...+..++...+++
T Consensus 235 ~~--------------------~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~ 293 (350)
T cd00609 235 TS--------------------GPSTLSQAAAAAALDDG-EEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLW 293 (350)
T ss_pred cc--------------------CCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEE
Confidence 00 00011223444444432 2788888999999999999999998655433233344555
Q ss_pred EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHH
Q 037144 412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVR 489 (502)
Q Consensus 412 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~ 489 (502)
+.+.+.. ..+.+.+.+.+.|.....+..+. +..++|++++.+ .+||+
T Consensus 294 ~~~~~~~----------------------------~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~---~~~i~ 342 (350)
T cd00609 294 LDLPEGD----------------------------DEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP---EEELE 342 (350)
T ss_pred EecCCCC----------------------------hHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC---HHHHH
Confidence 5543320 02234455555676544443333 567999999765 77999
Q ss_pred HHHHHHH
Q 037144 490 AAWTVVQ 496 (502)
Q Consensus 490 ~~~~~l~ 496 (502)
+++++|+
T Consensus 343 ~~~~al~ 349 (350)
T cd00609 343 EALERLA 349 (350)
T ss_pred HHHHHhh
Confidence 9999886
No 62
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.91 E-value=1.1e-22 Score=194.48 Aligned_cols=305 Identities=19% Similarity=0.212 Sum_probs=200.4
Q ss_pred CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC
Q 037144 105 GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT 184 (502)
Q Consensus 105 ~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 184 (502)
...|...|....+| +++++++|. . .++|+++||+||..++.+..+ ++..|++.+.+
T Consensus 28 ~~~YG~D~~~~~~e----~~~ae~~g~-~--------a~~Fv~sGT~aN~lal~~~~~-----------~~~~vi~~~~a 83 (342)
T COG2008 28 DDVYGEDPTTNALE----QRIAELFGK-E--------AALFVPSGTQANQLALAAHCQ-----------PGESVICHETA 83 (342)
T ss_pred CCCCCCCHHHHHHH----HHHHHHhCC-c--------eEEEecCccHHHHHHHHHhcC-----------CCCeEEEeccc
Confidence 44677777666655 557888888 2 489999999999999998874 67789999999
Q ss_pred chhHHHH--HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH-hcCCccEEEEEecCCcccccc---CChhHHHHH
Q 037144 185 HCAFQKA--AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV-EAELIPLFLCATVGTTAITAV---DPLKPLCDV 258 (502)
Q Consensus 185 H~s~~~a--a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~-~~g~~p~~Vv~t~gtt~~G~i---dpl~eI~~i 258 (502)
|...+.. ...++- +.+++..++.+|.|++++++..|..+. -...+|.++..|..| ..|.+ |.|++|.++
T Consensus 84 Hi~~~E~Ga~~~~~~----~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~t-e~GtVy~l~el~~i~~~ 158 (342)
T COG2008 84 HIYTDECGAPEFFGG----GQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTAT-EGGTVYPLDELEAISAV 158 (342)
T ss_pred cceecccCcHHHHcC----CceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccC-CCceecCHHHHHHHHHH
Confidence 9877663 455552 344455544578999999999998632 223456677666655 77888 556677788
Q ss_pred HHHhCCEEEeecccccccccC--ccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccC
Q 037144 259 AKQFGIWVHVDAAYAGSACIC--PEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEAT 336 (502)
Q Consensus 259 ~~~~g~~lhVDaA~g~~~~~~--~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~ 336 (502)
||++|+.||+|||.-+..+.. +....+. ..+||+++++.|.++.| .|.+++-+.+...++ .|......
T Consensus 159 ~k~~~l~LHmDGAR~~nA~valg~~~~~~~---~~~D~v~~~~tK~g~~~--~gAiv~gn~~~~~~a-----~~~rK~~G 228 (342)
T COG2008 159 CKEHGLPLHMDGARLANALVALGVALKTIK---SYVDSVSFCLTKGGGAP--VGAIVFGNRDFAKRA-----RRWRKRAG 228 (342)
T ss_pred HHHhCCceeechHHHHHHHHHcCCCHHHHH---hhCCEEEEecccCCcce--eeeEEEcCHHHHHHH-----HHHHHHhc
Confidence 999999999999864443322 2222222 38999999999999988 445555555443322 22211100
Q ss_pred CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeec
Q 037144 337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTP 416 (502)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~ 416 (502)
+ +-|..+-+++ ..+.++...-+...-++...+|++|.+.+.+.||+++..+++.|+|.++.+.
T Consensus 229 ------g----------l~~k~r~laA-~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~ 291 (342)
T COG2008 229 ------G----------LMRKARFLAA-QGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPE 291 (342)
T ss_pred ------c----------cHhhhhHHHH-HHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECCh
Confidence 0 1111121211 1122223333555666777889999999998899999988899998877653
Q ss_pred CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCE-EEEEEEecCCCCcHHHHHHHHHHH
Q 037144 417 SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGI-YVLRFAAGNSMTMESHVRAAWTVV 495 (502)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~-~~lR~~~~~~~t~~~di~~~~~~l 495 (502)
. . .+.+...|..+......... ..+|++ +++.++++||++++..+
T Consensus 292 ~--------------------------------~-i~~l~~~~~~~~~~~~~~~~~~~vRfv-ts~a~~~edv~~~~~~~ 337 (342)
T COG2008 292 S--------------------------------A-IEALRLAGALFYRGVLIGAHGEIVRFV-TSWATSEEDVDELVAAI 337 (342)
T ss_pred H--------------------------------H-HHHHHhhchhheeeeeccCCCceEEEE-eeccCCHHHHHHHHHHH
Confidence 2 1 13333334433222111122 479998 57999999999999999
Q ss_pred HHHH
Q 037144 496 QEHL 499 (502)
Q Consensus 496 ~~~~ 499 (502)
+++.
T Consensus 338 ~~~~ 341 (342)
T COG2008 338 KALL 341 (342)
T ss_pred HHhh
Confidence 8764
No 63
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.91 E-value=1.3e-22 Score=203.69 Aligned_cols=296 Identities=16% Similarity=0.076 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH---HHH
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK---AAQ 193 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~---aa~ 193 (502)
...++.+++++++| +. .+++++|||+++..++.+... +++.|+++...|+++.+ .++
T Consensus 33 ~~~~l~~~~a~~~g-~~--------~~~~~~~gt~a~~~~~~~l~~-----------~gd~v~~~~~~~~~~~~~~~~~~ 92 (338)
T cd06502 33 TTAKLEARAAELFG-KE--------AALFVPSGTAANQLALAAHTQ-----------PGGSVICHETAHIYTDEAGAPEF 92 (338)
T ss_pred HHHHHHHHHHHHhC-CC--------eEEEecCchHHHHHHHHHhcC-----------CCCeEEEecCcceeeecCCcHHH
Confidence 34456678889998 43 578999999998877765532 57788899999988654 356
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc-CCccEEEEEecCCcccc--ccCChhHHHHHHHHhCCEEEeec
Q 037144 194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA-ELIPLFLCATVGTTAIT--AVDPLKPLCDVAKQFGIWVHVDA 270 (502)
Q Consensus 194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~-g~~p~~Vv~t~gtt~~G--~idpl~eI~~i~~~~g~~lhVDa 270 (502)
+.|+ +++.+|.+ ++.+|+++|++++++..+. ..++.+|+++.++++.| ..+++++|+++|+++|+++|||+
T Consensus 93 ~~g~---~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDe 166 (338)
T cd06502 93 LSGV---KLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDG 166 (338)
T ss_pred HcCc---eEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeech
Confidence 6888 99999875 2589999999999753211 11345788888887633 24778899999999999999999
Q ss_pred ccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcc
Q 037144 271 AYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDW 350 (502)
Q Consensus 271 A~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 350 (502)
||..+....... ........+|+++.++|||++.|. |.+++.+++...........+-
T Consensus 167 a~~~~~~~~~~~-~~~~~~~~~d~~~~s~sK~~~~~~--g~~~~~~~~~~~~~~~~~~~~~------------------- 224 (338)
T cd06502 167 ARLANAAAALGV-ALKTYKSGVDSVSFCLSKGGGAPV--GAVVVGNRDFIARARRRRKQAG------------------- 224 (338)
T ss_pred HHHHHHHHhcCC-CHHHHHhcCCEEEEeccccCCCcc--ceEEECCHHHHHHHHHHHHHhC-------------------
Confidence 985432211110 111111378999999999999875 3344445544322211110000
Q ss_pred cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCC
Q 037144 351 QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNG 430 (502)
Q Consensus 351 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 430 (502)
.+.+..++..++++..+...++.+++++..++++++.+.|+++ ++.+ .++..++++++....
T Consensus 225 ---~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~~~~v~~~~~------------- 286 (338)
T cd06502 225 ---GGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL-GGLE-SEVQTNIVLLDPVEA------------- 286 (338)
T ss_pred ---CChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CCCc-ccccCCeEEEecCCc-------------
Confidence 0001123344455555544567778889999999999999988 4543 356778888876422
Q ss_pred CcccccccchhHhhHHHHHHHHHHHH---hcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144 431 TYDQYRQFSEEERTNEFNRELLESIN---VSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~l~~~l~---~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~ 497 (502)
.....++.+++. ++|..+... . ..++|+++. ..++++|++++++++++
T Consensus 287 --------------~~~~~~l~~~l~~~~~~gi~~~~~---~-~~~lRi~~~-~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 287 --------------NAVFVELSKEAIERRGEGVLFYAW---G-EGGVRFVTH-WDTTEEDVDELLSALKA 337 (338)
T ss_pred --------------cHHHHHHHHHHHHhhhCCEEEEec---C-CCeEEEEee-cCCCHHHHHHHHHHHhc
Confidence 112233334333 567543222 2 268999985 55667899999998865
No 64
>PRK07179 hypothetical protein; Provisional
Probab=99.91 E-value=5.9e-22 Score=203.93 Aligned_cols=291 Identities=11% Similarity=0.103 Sum_probs=194.7
Q ss_pred hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH
Q 037144 113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA 192 (502)
Q Consensus 113 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa 192 (502)
...++| +.+++++|.+. .++++||++||..++.+... +++.|+++...|.++...+
T Consensus 100 ~~~~le----~~la~~~g~~~---------~~~~~sG~~An~~~l~~l~~-----------~g~~v~~~~~~h~s~~~~~ 155 (407)
T PRK07179 100 PKPQFE----KKLAAFTGFES---------CLLCQSGWAANVGLLQTIAD-----------PNTPVYIDFFAHMSLWEGV 155 (407)
T ss_pred HHHHHH----HHHHHHhCCCc---------EEEECCHHHHHHHHHHHhCC-----------CCCEEEEECCcCHHHHHHH
Confidence 344555 56778888753 58899999999887776543 4567888999999999988
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
+..|. +++.++ ..|+++|+++|++.. +.+|++...++++|.+.|+++|.++|++||+++|+|++|
T Consensus 156 ~~~g~---~~~~~~-------~~d~~~l~~~l~~~~-----~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~ 220 (407)
T PRK07179 156 RAAGA---QAHPFR-------HNDVDHLRRQIERHG-----PGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESH 220 (407)
T ss_pred HHCCC---eEEEec-------CCCHHHHHHHHHhcC-----CeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcc
Confidence 88888 665543 358999999996521 347888889999999999999999999999999999999
Q ss_pred ccccccCccchhhh--cCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccCCC
Q 037144 273 AGSACICPEFRHFI--DGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVGYK 348 (502)
Q Consensus 273 g~~~~~~~~~~~~~--~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~ 348 (502)
+.+... +..+..+ .++ .++|+++.++||+++.+ .|+++.++. .. +.+.. ..++...
T Consensus 221 ~~g~~g-~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~--~G~l~~~~~-~~-~~~~~~~~~~~~~--------------- 280 (407)
T PRK07179 221 SLGTHG-PQGAGLVAELGLTSRVHFITASLAKAFAGR--AGIITCPRE-LA-EYVPFVSYPAIFS--------------- 280 (407)
T ss_pred cccCcC-CCCCchHHhcCCCCCCCEEEeechHhhhcc--CeEEEeCHH-HH-HHHHHhCcCeeeC---------------
Confidence 755431 1111111 122 35799999999999743 777776533 22 22211 1111111
Q ss_pred cccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcc
Q 037144 349 DWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKY 427 (502)
Q Consensus 349 ~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~ 427 (502)
++-. .....+.++++.+ +...++.++..+++++|++.|+++ |+++.. ..+++.+.+...
T Consensus 281 -----~t~~~~~~aa~~aal~~~--~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~~--~~~i~~l~~~~~---------- 340 (407)
T PRK07179 281 -----STLLPHEIAGLEATLEVI--ESADDRRARLHANARFLREGLSEL-GYNIRS--ESQIIALETGSE---------- 340 (407)
T ss_pred -----CCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCCC--CCCEEEEEeCCH----------
Confidence 0000 1112233445443 223457788999999999999988 787652 346676664321
Q ss_pred cCCCcccccccchhHhhHHHHHHHHHHHHhcCcE---EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 428 KNGTYDQYRQFSEEERTNEFNRELLESINVSGKV---FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.....+.+.|.++|.. ++.+....+..++|++++.. ++++||++++++|+++.++
T Consensus 341 ------------------~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~-~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 341 ------------------RNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNAD-LTASDLDRVLEVCREARDE 398 (407)
T ss_pred ------------------HHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCC-CCHHHHHHHHHHHHHHHHh
Confidence 1134566777778864 12222223457999998654 6677999999999988764
No 65
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.5e-21 Score=199.35 Aligned_cols=327 Identities=13% Similarity=0.116 Sum_probs=218.9
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCC--CCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDL--PKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK 167 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~--~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~ 167 (502)
+..+.+.+...+......|....+..++++.+.+|+.+.+|. +.+ ..++|+|+++++..++.+...
T Consensus 39 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~-------~i~~t~g~~~al~~~~~~l~~----- 106 (382)
T PRK06108 39 PDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPE-------RIAVTSSGVQALMLAAQALVG----- 106 (382)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcc-------eEEEeCChHHHHHHHHHHhcC-----
Confidence 445666666555444445777778889999999999999884 333 688999999998776665433
Q ss_pred hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144 168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKS-SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246 (502)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~-~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~ 246 (502)
+++.|+++...|..+...++..|+ +++.+|.+.+ +++.+|+++|++.+++.+ .+|+++.++|+|
T Consensus 107 ------~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~~~~~~------~~i~l~~p~NPt 171 (382)
T PRK06108 107 ------PGDEVVAVTPLWPNLVAAPKILGA---RVVCVPLDFGGGGWTLDLDRLLAAITPRT------RALFINSPNNPT 171 (382)
T ss_pred ------CCCEEEEeCCCccchHHHHHHCCC---EEEEeeCCCCCCCccCCHHHHHHhcCccc------eEEEEECCCCCC
Confidence 567788888999999999999999 9999999753 357899999999886433 367788899999
Q ss_pred cccC---ChhHHHHHHHHhCCEEEeeccccccccc-Cccchhhhc--CCCCCCeeEEccCCcCC-CCCcceEEEeeCchh
Q 037144 247 TAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACI-CPEFRHFID--GVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSC 319 (502)
Q Consensus 247 G~id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~-~~~~~~~~~--~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~ 319 (502)
|.+- ++++|+++|+++|+|+++|.+|+.+... ......... ....-..+..+++|.++ .+..+|+++..+ ..
T Consensus 172 G~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~-~~ 250 (382)
T PRK06108 172 GWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP-AL 250 (382)
T ss_pred CcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCH-HH
Confidence 9874 5788999999999999999999876543 111111111 11122356778999886 456689888743 22
Q ss_pred hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144 320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDK 397 (502)
Q Consensus 320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~ 397 (502)
+. .+.....|... + ...+...++...+ +.+.+++..++..++++++.+.|++++
T Consensus 251 ~~-~~~~~~~~~~~--------------------~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 306 (382)
T PRK06108 251 GQ-VLEKLIEYNTS--------------------C---VAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALP 306 (382)
T ss_pred HH-HHHHHHHhccc--------------------C---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 22 22111111100 0 0122222223222 455678888889999999999999888
Q ss_pred CeEEecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEE
Q 037144 398 RFEVAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYV 473 (502)
Q Consensus 398 ~~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~ 473 (502)
++++. +|+.+++.| ++.+.. ...++.+++.+ .|..+.++..+. +..+
T Consensus 307 ~~~~~-~p~~g~~~~~~l~~~~----------------------------~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~ 357 (382)
T PRK06108 307 GVEVA-KPDGAMYAFFRIPGVT----------------------------DSLALAKRLVDEAGLGLAPGTAFGPGGEGF 357 (382)
T ss_pred CCccc-CCCeeEEEEEeCCCCC----------------------------CHHHHHHHHHHhCCEEEeCchhhCCCCCCE
Confidence 88876 455555544 443210 02356666644 466544443332 3579
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 474 LRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 474 lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
+|++++. ++++++.+++.|.++.+
T Consensus 358 ~Ris~~~---~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 358 LRWCFAR---DPARLDEAVERLRRFLA 381 (382)
T ss_pred EEEEecC---CHHHHHHHHHHHHHHHh
Confidence 9999874 67799999999988764
No 66
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.90 E-value=3e-21 Score=194.67 Aligned_cols=299 Identities=11% Similarity=0.003 Sum_probs=196.2
Q ss_pred hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144 114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ 193 (502)
Q Consensus 114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~ 193 (502)
......++.+++++++|.++ .+++++|+++++.++.+... +++.|+++...|.++..+++
T Consensus 44 ~~~~~~~l~~~la~~~~~~~---------~iv~~sg~~a~~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~ 103 (349)
T cd06454 44 TSDLHEELEEELAEFHGKEA---------ALVFSSGYAANDGVLSTLAG-----------KGDLIISDSLNHASIIDGIR 103 (349)
T ss_pred CchHHHHHHHHHHHHhCCCC---------EEEeccHHHHHHHHHHHhcC-----------CCCEEEEehhhhHHHHHHHH
Confidence 34555667778888888753 46777788888877655542 57788899999999999999
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccc
Q 037144 194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 273 (502)
Q Consensus 194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g 273 (502)
..|+ +++.++ .+|++.+++++++.. ...++.+|+++.+++++|.+.|+++|+++|+++|+++++|++|+
T Consensus 104 ~~g~---~~~~~~-------~~~~~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~ 172 (349)
T cd06454 104 LSGA---KKRIFK-------HNDMEDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHS 172 (349)
T ss_pred HcCC---ceEEec-------CCCHHHHHHHHHHhh-ccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEcccc
Confidence 9998 888775 247889999987643 12345688888899999999999999999999999999999997
Q ss_pred cccccCcc-chhhhc-CCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc
Q 037144 274 GSACICPE-FRHFID-GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ 351 (502)
Q Consensus 274 ~~~~~~~~-~~~~~~-~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 351 (502)
.+.+.... ...... ...+.|+++.++||+++.+ + |+++. ++..+.........|...
T Consensus 173 ~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-g-G~i~~-~~~~~~~~~~~~~~~~~~------------------ 231 (349)
T cd06454 173 VGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAV-G-GYIAG-SKELIDYLRSYARGFIFS------------------ 231 (349)
T ss_pred ccccCCCCCChhhhccccccCcEEEeechhhhccc-C-CEEEC-CHHHHHHHHHhchhhhcc------------------
Confidence 54432110 000111 2236899999999999763 2 55544 343332221111111110
Q ss_pred ccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCC
Q 037144 352 ITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNG 430 (502)
Q Consensus 352 ~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 430 (502)
.+.. .....+..+++.+.. +.++.++..++++++.+.|.+. ++++..++...++++...+.
T Consensus 232 --~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~~~------------- 293 (349)
T cd06454 232 --TSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKEL-GFPVGGSPSHIIPPLIGDDP------------- 293 (349)
T ss_pred --CCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCcEEEEeCCCh-------------
Confidence 0000 112234445544322 4567788899999999999887 78776554433444433211
Q ss_pred CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee---ECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI---VGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
....++.+.|.++|........ ..+..++|++++ ..+++++|++++++|+++
T Consensus 294 ---------------~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 294 ---------------AKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLS-AAHTKEDIDRLLEALKEV 348 (349)
T ss_pred ---------------HHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEe-CCCCHHHHHHHHHHHHHh
Confidence 1235678888888865433211 112468999986 446677999999999875
No 67
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.3e-21 Score=200.42 Aligned_cols=331 Identities=11% Similarity=0.120 Sum_probs=221.1
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+......|...++..++++.+.+++.+.+|.+-.. ...++|+|+++++..++.+...
T Consensus 48 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~------- 115 (391)
T PRK08361 48 PKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDV-----DNVIVTAGAYEATYLAFESLLE------- 115 (391)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc-----ccEEEeCChHHHHHHHHHHhcC-------
Confidence 4556666665554444456666778899999999999888753211 2689999999998776665432
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|++++.+|.++...++..|+ +++.+|++.++++.+|+++|++.+++.+ .+|+++.++|+||.+
T Consensus 116 ----~g~~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~------~~v~i~~p~NPtG~~ 182 (391)
T PRK08361 116 ----EGDEVIIPDPAFVCYVEDAKIAEA---KPIRIPLREENEFQPDPDELLELITKRT------RMIVINYPNNPTGAT 182 (391)
T ss_pred ----CCCEEEEcCCCCcccHHHHHHcCC---EEEEEecCCccCCCCCHHHHHHhccccc------EEEEEeCCCCCCCcC
Confidence 567888899999999999999999 9999999865567899999999987543 367788899999999
Q ss_pred CC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhc
Q 037144 250 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLS 325 (502)
Q Consensus 250 dp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~ 325 (502)
-| +++|+++|+++++++++|.+|+.+.................+.++.+++|.++.| ..+|+++.. +..+.....
T Consensus 183 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~-~~~~~~~~~ 261 (391)
T PRK08361 183 LDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAP-EQVIKDMIK 261 (391)
T ss_pred cCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccC-HHHHHHHHH
Confidence 88 8899999999999999999997654422111111111113457788999998755 337888774 333322211
Q ss_pred CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cH--HHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 326 TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GV--ANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 326 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~--~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
...+.... ...+...++...+ +. +.+++..+++.++++.+.+.|++++++++
T Consensus 262 -~~~~~~~~-----------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~ 317 (391)
T PRK08361 262 -LHAYIIGN-----------------------VASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKV 317 (391)
T ss_pred -HHhhhccC-----------------------CChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCee
Confidence 11111000 0122233333333 21 34677788888889999999999888876
Q ss_pred ecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEEEEEE
Q 037144 402 AFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYVLRFA 477 (502)
Q Consensus 402 ~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~~ 477 (502)
. +|+.++++| ++++... + ..++.+.+.+ .|..+.++..+. +..++|++
T Consensus 318 ~-~p~g~~~~~~~l~~~~~-------------------------~--~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~ 369 (391)
T PRK08361 318 F-EPKGAFYVFANIDETGM-------------------------S--SEDFAEWLLEKARVVVIPGTAFGKAGEGYIRIS 369 (391)
T ss_pred c-CCCEEEEEEEECCCCCC-------------------------C--HHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEE
Confidence 5 455565554 4432111 0 2345555554 466544433332 35799999
Q ss_pred ecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 478 AGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 478 ~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
++. ++++++.+++.|+++.++
T Consensus 370 ~~~---~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 370 YAT---SKEKLIEAMERMEKALEE 390 (391)
T ss_pred ecC---CHHHHHHHHHHHHHHHhc
Confidence 873 566899999999888765
No 68
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.90 E-value=3.4e-21 Score=197.57 Aligned_cols=334 Identities=13% Similarity=0.088 Sum_probs=221.0
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (502)
..+.+.+...+......|....+...+++.+.+|+.+.+|..-.. ...++|+|+++++..++.+...
T Consensus 47 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~i~~~~g~~~a~~~~~~~~~~-------- 113 (393)
T PRK05764 47 EHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDP-----SQVIVTTGAKQALYNAFMALLD-------- 113 (393)
T ss_pred HHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCH-----HHEEEeCCcHHHHHHHHHHhcC--------
Confidence 455566665554444456666677889999999998887753211 2589999999998776665533
Q ss_pred cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-
Q 037144 171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV- 249 (502)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i- 249 (502)
+++.|+++...|..+..+++.+|+ +++.+|+++++.+.+|+++|++++++.+ .+|+++.++|++|.+
T Consensus 114 ---~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~p~NPtG~~~ 181 (393)
T PRK05764 114 ---PGDEVIIPAPYWVSYPEMVKLAGG---VPVFVPTGEENGFKLTVEQLEAAITPKT------KALILNSPSNPTGAVY 181 (393)
T ss_pred ---CCCEEEecCCCCcchHHHHHHcCC---EEEEEecCcccCCcCCHHHHHHhhCccc------eEEEEECCCCCCCccc
Confidence 567888899999999999999999 9999999865567899999999886433 367788899999998
Q ss_pred --CChhHHHHHHHHhCCEEEeecccccccccCcc---chhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhh
Q 037144 250 --DPLKPLCDVAKQFGIWVHVDAAYAGSACICPE---FRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLST 323 (502)
Q Consensus 250 --dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~---~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~ 323 (502)
+++++|+++|++||+|+++|.+|+...+..+. ......+...-+.+..+++|.++.| ..+|+++. ++.... .
T Consensus 182 ~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~-~~~~~~-~ 259 (393)
T PRK05764 182 SPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAG-PKELIK-A 259 (393)
T ss_pred CHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEec-CHHHHH-H
Confidence 45889999999999999999999765432111 1111112223456777899999755 34677664 343322 2
Q ss_pred hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
+.. +.... +-....+..+++.+.+ ..+.+.+..+++.++++++.+.|++++++++
T Consensus 260 ~~~---~~~~~--------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 316 (393)
T PRK05764 260 MSK---LQSHS--------------------TSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLEC 316 (393)
T ss_pred HHH---HHhhc--------------------ccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcc
Confidence 211 10000 0011234445555554 2455667777888889999999999888887
Q ss_pred ecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeECCEEEEEEEec
Q 037144 402 AFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVGGIYVLRFAAG 479 (502)
Q Consensus 402 ~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lR~~~~ 479 (502)
. +|..+.+.| .+.+... .......++.+.+.+ .|..+.++..+....++|++++
T Consensus 317 ~-~~~g~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~ 372 (393)
T PRK05764 317 P-KPEGAFYVFPNVSKLLG-----------------------KSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYA 372 (393)
T ss_pred c-CCCcceEEEEecccccc-----------------------cccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEec
Confidence 6 455444433 3432100 000012456666554 4765555444444679999987
Q ss_pred CCCCcHHHHHHHHHHHHHHHHh
Q 037144 480 NSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 480 ~~~t~~~di~~~~~~l~~~~~~ 501 (502)
. ++++++++++.|.++.++
T Consensus 373 ~---~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 373 T---SLEDLEEGLERIERFLES 391 (393)
T ss_pred C---CHHHHHHHHHHHHHHHHh
Confidence 3 578999999999988764
No 69
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.89 E-value=2.6e-22 Score=202.37 Aligned_cols=339 Identities=11% Similarity=0.038 Sum_probs=216.7
Q ss_pred ccCCCCCCHHHHHHHHHHhhc----CCCCcccccC---hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCC-chHH
Q 037144 81 AYFPATSSVAGIVGEMLSSGF----NVVGLDWISS---PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGT-TCEA 152 (502)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~~---p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~g-gt~a 152 (502)
.|.+++...|..+.+.+...+ |.....+..+ +.+.++-.++++.+++++|.+... ..+||+| ||++
T Consensus 2 ~~~pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~------~vvf~~gs~T~a 75 (355)
T cd00611 2 NFSAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNY------KVLFLQGGATGQ 75 (355)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHH
Confidence 355667777777777766665 4445555555 566788889999999999986543 6788877 8988
Q ss_pred HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccC-HHHHHHHHHHHHhcC
Q 037144 153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLS-AESVLSQINLDVEAE 231 (502)
Q Consensus 153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d-~~~Le~~i~~~~~~g 231 (502)
+..++..... .+.++++|+++...|.+ .+.++..|+ +++.+++++++. ..+ ++..+..++++
T Consensus 76 ~~~~~~~l~~--------~~~~~~~i~~g~~~~~~-~~~a~~~g~---~~~~~~~~~~g~-~~~~~~~~~~~~~~~---- 138 (355)
T cd00611 76 FAAVPLNLLG--------DKGTADYVVTGAWSAKA-AKEAKRYGG---VVVIVAAKEEGK-YTKIPDVETWDLAPD---- 138 (355)
T ss_pred HHHHHHhcCC--------CCCeEEEEECCHHHHHH-HHHHHhcCC---CcEEEecccccC-CCCCCCHhhcCCCCC----
Confidence 7655544311 11245677766555544 445677899 999999864321 113 22222333333
Q ss_pred CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceE
Q 037144 232 LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCC 311 (502)
Q Consensus 232 ~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~ 311 (502)
+.+|++++.+|.+|.+ ++ ++++.||+.++||++++.+..+.+-. ..|....++||+++ |.|.|+
T Consensus 139 --~~lV~~~h~~t~tG~~--~~---~i~~~~g~~~~VDa~qs~g~~~idv~--------~~~~~~ss~~K~lG-P~G~g~ 202 (355)
T cd00611 139 --AAYVHYCSNETIHGVE--FD---EVPDTGGVPLVADMSSNILSRPIDVS--------KFGVIYAGAQKNLG-PAGVTV 202 (355)
T ss_pred --CCEEEEeCCcccccEE--cc---eecccCCCeEEEEccccccCCCCCHH--------HhCEEEeecccccC-CCceEE
Confidence 3389999999999997 22 44556999999999999998877532 23445566999875 999999
Q ss_pred EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHH
Q 037144 312 LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFE 390 (502)
Q Consensus 312 ~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~ 390 (502)
++++++..- ..-...+.+..... ...... ...+..-....++..+++.+-.+ |++++.+++.+++++++
T Consensus 203 l~~~~~~~~-~~~~~~~~~~~~~~--------~~~~~~-~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~ 272 (355)
T cd00611 203 VIVRKDLLG-KARKITPSMLNYKT--------HADNNS-LYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLY 272 (355)
T ss_pred EEECHHHHh-hcccCCCCcccHHH--------HHhcCC-CCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 999876432 11111111111000 000000 00000011335777888888777 79999999999999999
Q ss_pred HHHhcCCCeE-EecC--CCe-eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee
Q 037144 391 RLVTSDKRFE-VAFP--RNF-SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA 466 (502)
Q Consensus 391 ~~l~~~~~~~-l~~~--~~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 466 (502)
+.|+++||+. ...+ .++ .+++|.+... .+..++.+.+.++|.+ ....
T Consensus 273 ~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~----------------------------~l~~~~~~~~~r~G~~-~~~~ 323 (355)
T cd00611 273 DTIDNSNGFYRGPVDKRARSRMNVPFRLGKE----------------------------ELEKEFLKEAEAAGMI-GLKG 323 (355)
T ss_pred HHHHhCccccccCCCHHHcCceEEEEEcCCh----------------------------hhhHHHHHHHHHCCCc-ccCC
Confidence 9999998863 2111 134 4588876431 1223444566677874 3322
Q ss_pred eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 467 IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 467 ~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
....+.+|+|+. +.++++|||+++++|+++.
T Consensus 324 -~~~~g~vR~S~~-~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 324 -HRSVGGIRASIY-NALSLEGVQALADFMKEFQ 354 (355)
T ss_pred -CcccCeEEEEcc-CCCCHHHHHHHHHHHHHHh
Confidence 222368999986 4567779999999998863
No 70
>PLN02483 serine palmitoyltransferase
Probab=99.89 E-value=2.5e-20 Score=194.76 Aligned_cols=345 Identities=12% Similarity=0.047 Sum_probs=212.3
Q ss_pred CCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchH
Q 037144 72 THWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCE 151 (502)
Q Consensus 72 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~ 151 (502)
.++.+-.|+|+....+..+..+.+.+..+-........ .-+......++.+.+++++|.++ .++.++|+.
T Consensus 103 ~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~-~~g~~~~~~ele~~lA~~~g~~~---------ai~~~~G~~ 172 (489)
T PLN02483 103 LNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRV-DGGTTKLHRELEELVARFVGKPA---------AIVFGMGYA 172 (489)
T ss_pred EEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCcccc-ccCCcHHHHHHHHHHHHHhCCCc---------EEEECCHHH
Confidence 34667788888755555556666666554211111110 01123344445566788888654 355566777
Q ss_pred HHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC
Q 037144 152 ALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE 231 (502)
Q Consensus 152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g 231 (502)
+|+.++.+... +++.|++++..|.|+..+++..|+ +++.++.+ |+++|++.|++....+
T Consensus 173 an~~~i~al~~-----------~Gd~Vi~d~~~h~s~~~~~~~~Ga---~v~~~~~~-------d~~~le~~l~~~i~~~ 231 (489)
T PLN02483 173 TNSTIIPALIG-----------KGGLIISDSLNHNSIVNGARGSGA---TIRVFQHN-------TPSHLEEVLREQIAEG 231 (489)
T ss_pred HHHHHHHHhCC-----------CCCEEEEcchhhHHHHHHHHHcCC---eEEEEeCC-------CHHHHHHHHHhhhhcc
Confidence 78755554322 678899999999999999999999 99999864 5678888776543211
Q ss_pred -------CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcC--CCCCCeeEEccC
Q 037144 232 -------LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDG--VECVDSFSFNPH 300 (502)
Q Consensus 232 -------~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~--~~~aDsi~~~~h 300 (502)
....+|++....+++|.+.++++|+++|++||+++++|.||+.+.+. +..+.. ..+ ..++|.++.+++
T Consensus 232 ~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G-~~G~g~~~~~~v~~~~~dI~~~SfS 310 (489)
T PLN02483 232 QPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVG-KTGRGVCELLGVDPADVDIMMGTFT 310 (489)
T ss_pred ccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccC-CCCCchHHhcCCCcccCcEEEEecc
Confidence 11245666666789999999999999999999999999999754321 111110 111 236789999999
Q ss_pred CcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh----cHHHHH
Q 037144 301 KWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF----GVANLR 376 (502)
Q Consensus 301 K~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~----g~~g~~ 376 (502)
|+++.+ | |+++ .++..+.........+..... ..+..+..+.++++.+ |.+...
T Consensus 311 Ks~g~~-G-G~i~-~~~~li~~l~~~~~~~~~~~~-------------------~~p~~~~~~~aaL~~l~~~~g~~~~~ 368 (489)
T PLN02483 311 KSFGSC-G-GYIA-GSKELIQYLKRTCPAHLYATS-------------------MSPPAVQQVISAIKVILGEDGTNRGA 368 (489)
T ss_pred hhcccC-c-eEEE-cCHHHHHHHHHhCccccccCC-------------------cCHHHHHHHHHHHHHHHhCccccchH
Confidence 999754 2 5554 344433222111111211100 0000111223344432 122345
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH
Q 037144 377 NFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN 456 (502)
Q Consensus 377 ~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 456 (502)
+++++..+++++|++.|+++ |+++..+...+++.+.+... ....++.++|.
T Consensus 369 ~~~~~l~~~~~~l~~~L~~~-G~~v~~~~~sp~~~l~l~~~----------------------------~~~~~~~~~Ll 419 (489)
T PLN02483 369 QKLAQIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNP----------------------------AKIPAFSRECL 419 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCEEEEEECCH----------------------------HHHHHHHHHHH
Confidence 66788999999999999998 78876554455555544321 11235667777
Q ss_pred hcCcEEEEeeeE----CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 457 VSGKVFMTHAIV----GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 457 ~~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
++|..+.. ..+ .+...+|++++..+ +++||++++++|.++.+.
T Consensus 420 ~~GI~v~~-~~fp~~p~~~~~vRi~isa~~-t~edId~~l~~L~~~~~~ 466 (489)
T PLN02483 420 KQNVAVVV-VGFPATPLLLARARICISASH-SREDLIKALEVISEVGDL 466 (489)
T ss_pred HCCcEEee-eCCCCCCCCCceEEEEeCCCC-CHHHHHHHHHHHHHHHHH
Confidence 77876553 222 23468999987554 556999999999998764
No 71
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.89 E-value=1.1e-20 Score=190.92 Aligned_cols=324 Identities=12% Similarity=0.106 Sum_probs=199.6
Q ss_pred CCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHH--
Q 037144 87 SSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRV-- 164 (502)
Q Consensus 87 ~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~-- 164 (502)
..+|..+.+.+....+. |. ...++.+++.+++++++|.+ .+++|+|+|+|+..++.+....-
T Consensus 23 s~~~~~v~~a~~~~~~~----~~---~~~~~~~~~~~~~a~~~g~~---------~~~~~~g~t~al~~al~al~~~Gd~ 86 (363)
T TIGR01437 23 STVSDEVADAQKRGAQN----YF---EIKELVNKTGEYIANLLGVE---------DAVIVSSASAGIAQSVAAVITRGNR 86 (363)
T ss_pred CCCCHHHHHHHHHHHhc----CC---CHHHHHHHHHHHHHHhhCCC---------eEEEEcCHHHHHHHHHHHHhcCCCc
Confidence 33555666666655533 11 23567788899999999975 36899999999998888764310
Q ss_pred --HHHhCccCCCCeEEEeCCCCchh-----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEE
Q 037144 165 --LKKIGRENISKLVVYSSDQTHCA-----FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFL 237 (502)
Q Consensus 165 --~~~~~~~~~~~~~v~~s~~~H~s-----~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~V 237 (502)
..+......++..|+++. .|+. +..++.+.|+ +++.++.+ +.+|+++|+++|+++++ .++
T Consensus 87 ~~~~~~~~s~~~~~eVi~~~-~~~~~~~~~~~~~~~~~g~---~~v~v~~~----~~~d~~~le~ai~~~t~-----ai~ 153 (363)
T TIGR01437 87 YLVENLHDSKIEVNEVVLPK-GHNVDYGAPVETMVRLGGG---KVVEAGYA----NECSAEQLEAAITEKTA-----AIL 153 (363)
T ss_pred chhhcccccccccceEEEEC-ccchhcCCchHHHHHhcCC---eEEEEcCC----CCCCHHHHHHhcChhce-----EEE
Confidence 000000001233667765 5543 3467788899 89888763 37999999999987764 244
Q ss_pred EEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc
Q 037144 238 CATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP 317 (502)
Q Consensus 238 v~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~ 317 (502)
.++.+++++|.+.|+++|+++|++||+++|+|+||+.. ...... + ++|++++++||++.+|. .|+++.+ +
T Consensus 154 ~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~---~~~~~~----~-g~D~~~~S~~K~l~gp~-~G~l~~~-~ 223 (363)
T TIGR01437 154 YIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEED---LQKYYR----L-GADLVIYSGAKAIEGPT-SGLVLGK-K 223 (363)
T ss_pred EEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCc---hHHHHH----c-CCCEEEEeCCcccCCCc-eEEEEEc-H
Confidence 46677789999999999999999999999999999621 111111 1 68999999999998886 6776653 3
Q ss_pred hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144 318 SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK 397 (502)
Q Consensus 318 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 397 (502)
..+... . .+..... . .++.+. ...+.+..++..+-..+. +.++...++++++++.|.++|
T Consensus 224 ~~i~~~-~---~~~~~~~-------~-------~~~~~~-~~~~gl~aAl~~~~~~~~-~~~~~~~~~~~~l~~~L~~i~ 283 (363)
T TIGR01437 224 KYIEWV-K---LQSKGIG-------R-------AMKVGK-ENILGLTAALEQYLSTGK-ESGAEMVAKLTPFIEALNTLK 283 (363)
T ss_pred HHHHHH-H---hccCCCc-------c-------eeccCH-HHHHHHHHHHHHHHccCc-ccHHHHHHHHHHHHHHHhcCC
Confidence 333211 1 0110000 0 000000 112455556655422222 333444556778999999999
Q ss_pred CeEEecCCC-------eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECC
Q 037144 398 RFEVAFPRN-------FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGG 470 (502)
Q Consensus 398 ~~~l~~~~~-------~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g 470 (502)
|+++..++. ...+.|.....+. ...++.+.|.+.+.-+.....+..
T Consensus 284 g~~~~~~~~~~~~~~~~~~v~~~~~~~g~---------------------------~~~~l~~~L~~~~~~I~~r~~~~~ 336 (363)
T TIGR01437 284 GVSASIVQDEAGRDIARAEIRFDESELGM---------------------------TAADVVQALRQGEPAIYTRGYKAN 336 (363)
T ss_pred CeEEEEecCCCCCcCceEEEEEeccCCCC---------------------------CHHHHHHHHhcCCCCEEEeeeeec
Confidence 999874221 1223333211111 134677777666643333322344
Q ss_pred EEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 471 IYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 471 ~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
.+.+|+.... ++++|++.++++|.++
T Consensus 337 ~~~~~l~~~~--~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 337 EGIIEIDPRS--VTGGQLDIIVERIREI 362 (363)
T ss_pred CCeEEEEeec--CCHHHHHHHHHHHHHh
Confidence 5577877653 4588999999999875
No 72
>PRK07324 transaminase; Validated
Probab=99.88 E-value=1.2e-20 Score=191.78 Aligned_cols=318 Identities=9% Similarity=0.022 Sum_probs=205.6
Q ss_pred HHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC
Q 037144 96 MLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK 175 (502)
Q Consensus 96 ~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~ 175 (502)
.+...++.....|....+..++++.+.+|+. +++.+ ..++|+|+++++..++.+... ++
T Consensus 46 ~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~---~~~~~-------~vi~t~G~~~al~~~~~~l~~-----------~g 104 (373)
T PRK07324 46 AFYQELGQKKLTYGWIEGSPEFKEAVASLYQ---NVKPE-------NILQTNGATGANFLVLYALVE-----------PG 104 (373)
T ss_pred HHHHHHhcCCccCCCCCCCHHHHHHHHHHhc---CCChh-------hEEEcCChHHHHHHHHHHhCC-----------CC
Confidence 3333344444456555566777777666553 34433 589999999999887766543 67
Q ss_pred eEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---h
Q 037144 176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---L 252 (502)
Q Consensus 176 ~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l 252 (502)
+.|+++.++|.++...++..|. +++.+|++.++++.+|+++|++++++++ .+|+++.++|+||.+-+ +
T Consensus 105 d~Vl~~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~~~------kli~i~~p~NPtG~~~~~~~l 175 (373)
T PRK07324 105 DHVISVYPTYQQLYDIPESLGA---EVDYWQLKEENGWLPDLDELRRLVRPNT------KLICINNANNPTGALMDRAYL 175 (373)
T ss_pred CEEEEcCCCchhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHhCCCCC------cEEEEeCCCCCCCCCCCHHHH
Confidence 7888888999999999999999 9999999865457899999998876543 37888999999999977 8
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCC-CCcceEEEeeCchhhhhhhcCCcccc
Q 037144 253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSCLLSTLSTNPQYL 331 (502)
Q Consensus 253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~~~~yl 331 (502)
++|+++|++||+++++|.+|...... ........ ...-...+.+++|.++. ...+|+++. ++..+. .+.....+.
T Consensus 176 ~~i~~~a~~~~~~ii~De~y~~l~~~-~~~~s~~~-~~~~~I~~~s~SK~~~~~G~RiG~i~~-~~~li~-~~~~~~~~~ 251 (373)
T PRK07324 176 EEIVEIARSVDAYVLSDEVYRPLDED-GSTPSIAD-LYEKGISTNSMSKTYSLPGIRVGWIAA-NEEVID-ILRKYRDYT 251 (373)
T ss_pred HHHHHHHHHCCCEEEEEccccccccC-CCCCChhh-ccCCEEEEecchhhcCCccceeEEEec-CHHHHH-HHHHHhCcE
Confidence 99999999999999999999764432 11111111 11112445679999874 455788876 444332 221111111
Q ss_pred cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeE
Q 037144 332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG--VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSL 409 (502)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~ 409 (502)
.. + ...+..+++...+. ..-+++..+...++++.+.+.|++.+++.... |..+.
T Consensus 252 ~~--------------------~---~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~-p~gg~ 307 (373)
T PRK07324 252 MI--------------------C---AGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVK-PKAVS 307 (373)
T ss_pred Ee--------------------c---CChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEC-CCceE
Confidence 00 0 02233333333332 23445556666777888888898888887764 44444
Q ss_pred EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144 410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV 488 (502)
Q Consensus 410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di 488 (502)
..|...+... ...++.+++. +.|..+.++..+...+++|++++. +++.+
T Consensus 308 ~~~i~~~~~~---------------------------~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~---~~~~l 357 (373)
T PRK07324 308 TSFVKLDVDM---------------------------PSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCC---DTETL 357 (373)
T ss_pred EEEEEeCCCC---------------------------CHHHHHHHHHHhcCEEEECccccCCCCeEEEEecC---CHHHH
Confidence 4443333210 0234556654 447655555555556799999863 56789
Q ss_pred HHHHHHHHHHHHh
Q 037144 489 RAAWTVVQEHLEA 501 (502)
Q Consensus 489 ~~~~~~l~~~~~~ 501 (502)
++.++.|.+..++
T Consensus 358 ~~~l~rl~~~l~~ 370 (373)
T PRK07324 358 KKGLKKLSEFLRE 370 (373)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999887765
No 73
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.88 E-value=6.6e-21 Score=193.91 Aligned_cols=325 Identities=13% Similarity=0.059 Sum_probs=206.8
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHH-----HHHhC-----------c-
Q 037144 108 WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRV-----LKKIG-----------R- 170 (502)
Q Consensus 108 ~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~-----~~~~~-----------~- 170 (502)
|.......++|..+.+..+++||.+.. -+=.-||+.||+.+..+..... +.+-| +
T Consensus 87 y~g~~~~d~ie~l~~~ra~~lf~a~~a--------nvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~ 158 (493)
T PRK13580 87 YAGCQNVDTVEWEAAEHAKELFGAEHA--------YVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWE 158 (493)
T ss_pred cCCCchHHHHHHHHHHHHHHHhCCCcc--------cccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhh
Confidence 344556789999999999999998653 2334578899987777665420 00000 0
Q ss_pred ---cCCCCeEEEe---CCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144 171 ---ENISKLVVYS---SDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT 244 (502)
Q Consensus 171 ---~~~~~~~v~~---s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt 244 (502)
..+.++.|+. +.-.|.+.-......|... .++..+++.. ++.+|.+++++.+.+.+ | .|++++.++
T Consensus 159 ~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~-~~~~y~vd~~-~g~iD~d~l~~~~~~~~-----p-lvii~g~S~ 230 (493)
T PRK13580 159 ALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMF-HQRSYGVDPD-TGLLDYDEIAALAREFK-----P-LILVAGYSA 230 (493)
T ss_pred hhhccCCCCEEEeecCCCCCeeecCcccchhhhee-eeEecccCcc-cCccCHHHHHHHHhhcC-----C-EEEEeCccc
Confidence 0012344443 2334544433334444311 5566677643 57999999999998765 3 566667776
Q ss_pred cccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhh
Q 037144 245 AITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTL 324 (502)
Q Consensus 245 ~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~ 324 (502)
. |...|+++|.++|++||++++||+||+.+.+.............++|++++++||+|++|.| |++++++. . .+.+
T Consensus 231 ~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I~~~~~-l-~~~L 306 (493)
T PRK13580 231 Y-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLVLAKKE-Y-ADAV 306 (493)
T ss_pred c-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhccCCCe-EEEEecHH-H-HHHH
Confidence 6 55779999999999999999999999998876443321122235899999999999988874 77777643 2 2223
Q ss_pred cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-
Q 037144 325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF- 403 (502)
Q Consensus 325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~- 403 (502)
....+|+++.... ....+...++.......+.++.++..+++++|++.|.+. ||.++.
T Consensus 307 ~~a~P~i~gg~l~--------------------p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~g 365 (493)
T PRK13580 307 DKGCPLVLGGPLP--------------------HVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR-GARLVTG 365 (493)
T ss_pred hhCCCcccCCCcc--------------------HHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-CCCccCC
Confidence 2223455432210 011222233444333345778899999999999999987 898863
Q ss_pred CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE---EeeeECC---EEEEEEE
Q 037144 404 PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM---THAIVGG---IYVLRFA 477 (502)
Q Consensus 404 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~~~g---~~~lR~~ 477 (502)
..++.+|.+.+.+.. .....+.+.|.+.|+.+- .|++..+ ...||++
T Consensus 366 gTdshIV~V~lg~~~---------------------------~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg 418 (493)
T PRK13580 366 GTDNHLVLIDVTSFG---------------------------LTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLG 418 (493)
T ss_pred CCCCCEEEEEeCCHH---------------------------HHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEec
Confidence 245678877775421 112345557777786432 2333334 5679999
Q ss_pred ecCCCC---cHHHHHHHHHHHHHHHH
Q 037144 478 AGNSMT---MESHVRAAWTVVQEHLE 500 (502)
Q Consensus 478 ~~~~~t---~~~di~~~~~~l~~~~~ 500 (502)
++..++ +++||+++.+.|.++.+
T Consensus 419 ~~A~ttrg~teedi~~iad~l~~~l~ 444 (493)
T PRK13580 419 TPALTTLGMGSDEMDEVAELIVKVLS 444 (493)
T ss_pred cchhhhcCCCHHHHHHHHHHHHHHHH
Confidence 764322 57899999999987764
No 74
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.88 E-value=3.9e-20 Score=191.10 Aligned_cols=340 Identities=9% Similarity=0.050 Sum_probs=219.9
Q ss_pred HHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 90 AGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
|..+.+.+...+... ...|....+..++++.+.+++.+.+|.+-.. ...++|+|+++++.+++.+..+
T Consensus 71 ~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-----~~v~it~G~~~al~l~~~~l~~------ 139 (430)
T PLN00145 71 APEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELST-----DDIYLTAGCAQAIEIIMSVLAQ------ 139 (430)
T ss_pred CHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCCh-----hhEEEeCCHHHHHHHHHHHhcC------
Confidence 334555555555332 3356666678889999999998877764221 2689999999999877765532
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|+++.+.+..+...+...|+ +++.+++.++.++.+|+++|++++++.+ .+++++.++|+||.
T Consensus 140 -----~Gd~Vlv~~P~y~~y~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~P~NPtG~ 205 (430)
T PLN00145 140 -----PGANILLPRPGYPLYEARAVFSGL---EVRHFDLLPERGWEVDLEGVEALADENT------VAMVIINPNNPCGS 205 (430)
T ss_pred -----CCCEEEEcCCCCccHHHHHHHcCC---EEEEeeCCcccCCcCCHHHHHHHhCcCc------eEEEEeCCCCCCCC
Confidence 677899999999988889999999 9999998655568999999999886644 37888889999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCC-CCee-EEccCCcC-CCCCcceEEEeeCchhhhh
Q 037144 249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEC-VDSF-SFNPHKWL-FTTLDCCCLWVKDPSCLLS 322 (502)
Q Consensus 249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~-aDsi-~~~~hK~l-~~p~~~g~~~~r~~~~l~~ 322 (502)
+-| +++|+++|+++|+++++|.+|+.+.+........ ..+.. ...+ ..++.|.+ .....+|+++..++..+..
T Consensus 206 v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~-~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~ 284 (430)
T PLN00145 206 VYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPM-GVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILK 284 (430)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccch-hhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhh
Confidence 977 8888999999999999999997654322111111 11111 2234 45599995 4557789888754322110
Q ss_pred h---hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcC
Q 037144 323 T---LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSD 396 (502)
Q Consensus 323 ~---~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~ 396 (502)
. ......+.... . ....+..+++...+ ..+.+++.++...+.++.+.+.|+++
T Consensus 285 ~~~~~~~~~~~~~~~-------------------~--~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 343 (430)
T PLN00145 285 ETKVVDSIRNYLNIS-------------------T--DPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEI 343 (430)
T ss_pred hhHHHHHHHHHhccc-------------------C--CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0 00000011000 0 00122223333333 24567888888999999999999998
Q ss_pred CCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEE
Q 037144 397 KRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLR 475 (502)
Q Consensus 397 ~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR 475 (502)
+++++...|+.+++.|.-.+... ..... ...+++.++. +.|.+++++..++...++|
T Consensus 344 ~g~~~~~~P~ga~y~~v~l~~~~---------------------~~~~~-~~~~~~~~ll~~~gV~v~pG~~fg~~~~lR 401 (430)
T PLN00145 344 KCITCPHKPEGSMFVMVKLDLSC---------------------LSGIK-DDMDFCCKLAKEESVVVLPGSALGMKNWLR 401 (430)
T ss_pred CCCCCCcCCCeeeEEEeccChhh---------------------cCCCC-CHHHHHHHHHHhCCEEEeCccccCCCCeEE
Confidence 88876545655555443322100 00000 0123454444 4466555555566578999
Q ss_pred EEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 476 FAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 476 ~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
++++ .++++++.+++.|.+.+.+
T Consensus 402 is~~---~~~~~l~~al~rl~~~~~~ 424 (430)
T PLN00145 402 ITFA---IDPPSLEDGLERLKSFCLR 424 (430)
T ss_pred EEeC---CCHHHHHHHHHHHHHHHHH
Confidence 9997 3577899999999887654
No 75
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.88 E-value=6.4e-20 Score=188.46 Aligned_cols=329 Identities=12% Similarity=0.090 Sum_probs=214.4
Q ss_pred HHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144 92 IVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170 (502)
Q Consensus 92 ~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (502)
.+.+.+...++.. ...|....+..++.+.+.+|+++.+|.+... ....++|+|+++++..++.+..+
T Consensus 57 ~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~----~~~I~it~Ga~~al~~~~~~l~~-------- 124 (405)
T PRK06207 57 GAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDA----ADELIITPGTQGALFLAVAATVA-------- 124 (405)
T ss_pred HHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCcHHHHHHHHHHhcC--------
Confidence 3444444444332 3456666677889999999999999964210 01689999999988776665443
Q ss_pred cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC---CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK---SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~---~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
+++.|++..++|..+...++.+|. +++.|+++. +.++.+|+++|++++++.+ .+|+++.++|+||
T Consensus 125 ---~Gd~Vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~------k~v~l~~P~NPTG 192 (405)
T PRK06207 125 ---RGDKVAIVQPDYFANRKLVEFFEG---EMVPVQLDYLSADKRAGLDLDQLEEAFKAGV------RVFLFSNPNNPAG 192 (405)
T ss_pred ---CCCEEEEeCCCchhHHHHHHHcCC---EEEEEeccccCcccCCCcCHHHHHHhhhhcC------eEEEECCCCCCCC
Confidence 678888899999999999999999 999999862 2357899999999986543 3788899999999
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC--CCC-eeEEccCCcCCCC-CcceEEEeeCchhh
Q 037144 248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE--CVD-SFSFNPHKWLFTT-LDCCCLWVKDPSCL 320 (502)
Q Consensus 248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~--~aD-si~~~~hK~l~~p-~~~g~~~~r~~~~l 320 (502)
.+-+ +++|+++|++||+|+++|.+|+...+....... +..+. .-. .++.+++|.++.| ..+|+++. ++...
T Consensus 193 ~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~-~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~-~~~l~ 270 (405)
T PRK06207 193 VVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTH-LRALPIDPENVITIMGPSKTESLSGYRLGVAFG-SPAII 270 (405)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCc-hhcCCCCcCcEEEEecchhhccCcccceEEEEc-CHHHH
Confidence 9976 778889999999999999999765442211111 11111 112 4566799999844 55787764 33332
Q ss_pred hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144 321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKR 398 (502)
Q Consensus 321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~ 398 (502)
. .+.....+.... ...+...++...+ +...+.+.++++.+.++.+.+.|+++++
T Consensus 271 ~-~~~~~~~~~~~~-----------------------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 326 (405)
T PRK06207 271 D-RMEKLQAIVSLR-----------------------AAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEG 326 (405)
T ss_pred H-HHHHHHhHhccC-----------------------CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 2 221111111000 0112222222223 3345677788888888999999988878
Q ss_pred eEEecCCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEE
Q 037144 399 FEVAFPRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVL 474 (502)
Q Consensus 399 ~~l~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~l 474 (502)
+++. +|..++++ +++++... + ...+.+.+. +.|..+.++..+. +..++
T Consensus 327 ~~~~-~p~gg~fl~~~l~~~~~-------------------------~--~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~ 378 (405)
T PRK06207 327 VFVR-APQAGSYLFPRLPRLAV-------------------------S--LHDFVKILRLQAGVIVTPGTEFSPHTADSI 378 (405)
T ss_pred ceec-CCCeeEEEEEeCcccCC-------------------------C--HHHHHHHHHHhcCEEEeCchHhCCCCCCeE
Confidence 8765 45444444 44432110 0 234666665 4576655544442 35799
Q ss_pred EEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 475 RFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 475 R~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
|++++. ++++++..++.|.++.++
T Consensus 379 Ris~~~---~~~~l~~al~rl~~~l~~ 402 (405)
T PRK06207 379 RLNFSQ---DHAAAVAAAERIAQLIER 402 (405)
T ss_pred EEEecC---CHHHHHHHHHHHHHHHHH
Confidence 999974 467899999999887664
No 76
>PLN02656 tyrosine transaminase
Probab=99.88 E-value=4.9e-20 Score=189.60 Aligned_cols=339 Identities=10% Similarity=0.053 Sum_probs=220.1
Q ss_pred CHHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144 88 SVAGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK 166 (502)
Q Consensus 88 ~~~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~ 166 (502)
.+|..+.+.+...+..+ ...|....+..++++.+.+++...+|..-.. ...++|+|+++++..++.+..+
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~---- 118 (409)
T PLN02656 48 HTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSL-----DDVFITSGCTQAIDVALSMLAR---- 118 (409)
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCc-----ccEEEeCChHHHHHHHHHHHhC----
Confidence 34556666666655443 3467666777889999999999887764221 2689999999998777665533
Q ss_pred HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144 167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246 (502)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~ 246 (502)
+++.|++++..|..+...+...|+ +++.+|+++++++.+|+++|++++++.+ .+|+++.++|+|
T Consensus 119 -------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~P~NPt 182 (409)
T PLN02656 119 -------PGANILLPRPGFPIYELCAAFRHL---EVRYVDLLPEKGWEVDLDAVEALADQNT------VALVIINPGNPC 182 (409)
T ss_pred -------CCCeEEEeCCCCCcHHHHHHHcCC---EEEEEeCCCcCCCCCCHHHHHHHhccCc------eEEEEECCCCCC
Confidence 677888999999888888889999 9999999654457899999998886543 368888899999
Q ss_pred ccc---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCC-Ce-eEEccCCcC-CCCCcceEEEeeCc---
Q 037144 247 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECV-DS-FSFNPHKWL-FTTLDCCCLWVKDP--- 317 (502)
Q Consensus 247 G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~a-Ds-i~~~~hK~l-~~p~~~g~~~~r~~--- 317 (502)
|.+ +++++|+++|+++|+|+++|.+|+...+........ ..+... -. +..++.|.+ .....+|+++..++
T Consensus 183 G~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~ 261 (409)
T PLN02656 183 GNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPM-GVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGS 261 (409)
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccH-HHhcccCcEEEEcccchhccCcceeEEEEEEeCcccc
Confidence 999 679999999999999999999998655422111111 111111 13 445699985 45577888887532
Q ss_pred ---hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHH
Q 037144 318 ---SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFER 391 (502)
Q Consensus 318 ---~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~ 391 (502)
..+...+........ ....+..+++...+ ....+++..++..+.++.+.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~------------------------~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~ 317 (409)
T PLN02656 262 FRDPKIVERIKKYFDILG------------------------GPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCD 317 (409)
T ss_pred cccHHHHHHHHHHHhhhc------------------------CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 112222211000000 00223333333333 234677788888888999999
Q ss_pred HHhcCCCeEEecCCCeeEEEEEeecCc-chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECC
Q 037144 392 LVTSDKRFEVAFPRNFSLVCFRVTPSA-VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGG 470 (502)
Q Consensus 392 ~l~~~~~~~l~~~~~~~~v~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g 470 (502)
.|++++++....+|+.+++.|...+.. .. +.. +. ...+.+.+.+.|..+.++..++.
T Consensus 318 ~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~-------------------~~~--~~-~~~~~~~l~~~gV~v~pg~~fg~ 375 (409)
T PLN02656 318 RIKEIPCITCPHKPEGSMAVMVKLNLSLLE-------------------DIS--DD-IDFCFKLAREESVIILPGTAVGL 375 (409)
T ss_pred HHhhCCCCcCCcCCCeEEEEEEecchhhcC-------------------CCC--CH-HHHHHHHHHhCCEEEecchhcCC
Confidence 998886654333566666554332210 00 000 00 11223445556776665555555
Q ss_pred EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 471 IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 471 ~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..++|++++. +++++++.++.|+++...
T Consensus 376 ~~~iRi~~~~---~~e~l~eal~rl~~~~~~ 403 (409)
T PLN02656 376 KNWLRITFAA---DPSSLEEALGRIKSFYLR 403 (409)
T ss_pred CCeEEEEeCC---CHHHHHHHHHHHHHHHHH
Confidence 6799999973 567999999999887653
No 77
>PRK07682 hypothetical protein; Validated
Probab=99.88 E-value=1.6e-20 Score=191.49 Aligned_cols=328 Identities=12% Similarity=0.097 Sum_probs=218.4
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC
Q 037144 93 VGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN 172 (502)
Q Consensus 93 ~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~ 172 (502)
+.+.+...+......|...++..++.+++.+|+.+.+|.+-.. ....++|+|+++|+..++.+..+
T Consensus 38 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~l~~---------- 103 (378)
T PRK07682 38 VREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDP----NDEIIVTVGASQALDVAMRAIIN---------- 103 (378)
T ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhCC----------
Confidence 4444444443333456666778899999999999988874211 01589999999998776655433
Q ss_pred CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC--
Q 037144 173 ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD-- 250 (502)
Q Consensus 173 ~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id-- 250 (502)
+++.|+++..+|..+...++..|. +++.++++.++++.+|+++|++++.+.+ .+|+++.++|+||.+-
T Consensus 104 -~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~~p~NPtG~~~s~ 173 (378)
T PRK07682 104 -PGDEVLIVEPSFVSYAPLVTLAGG---VPVPVATTLENEFKVQPAQIEAAITAKT------KAILLCSPNNPTGAVLNK 173 (378)
T ss_pred -CCCEEEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCCCCHHHHHhhcCccc------EEEEEECCCCCcCcCcCH
Confidence 677888899999999999999998 8999998654457899999999886533 3677788999999984
Q ss_pred -ChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCC-CCcceEEEeeCchhhhhhhcC
Q 037144 251 -PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSCLLSTLST 326 (502)
Q Consensus 251 -pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~ 326 (502)
.+++|+++|++|++++++|.+|+.+.... ..... +.+...-..+..+++|.++. ...+|+++..+ ... +.+..
T Consensus 174 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~-~~i-~~l~~ 250 (378)
T PRK07682 174 SELEEIAVIVEKHDLIVLSDEIYAELTYDE-AYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPV-YFS-EAMLK 250 (378)
T ss_pred HHHHHHHHHHHHcCcEEEEehhhhhcccCC-CCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCH-HHH-HHHHH
Confidence 48899999999999999999998765421 11111 11222234667779999974 45588887643 322 22211
Q ss_pred CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 037144 327 NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP 404 (502)
Q Consensus 327 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~ 404 (502)
...+... ....+...++.+.+ |...+++..+++.++++++.+.|+++ ++++. +
T Consensus 251 ~~~~~~~-----------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~ 305 (378)
T PRK07682 251 IHQYSMM-----------------------CAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCH-V 305 (378)
T ss_pred HHHhhcc-----------------------CCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-C
Confidence 1111100 00223333344443 44557778888899999999999987 77765 5
Q ss_pred CCeeEEEEEee-cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEEEecC
Q 037144 405 RNFSLVCFRVT-PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRFAAGN 480 (502)
Q Consensus 405 ~~~~~v~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~ 480 (502)
|+.+++.|... +... + ..++.+++. +.|..+.++..+. +..++|++++.
T Consensus 306 p~g~~~~~~~~~~~~~-------------------------~--~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~ 358 (378)
T PRK07682 306 PGGAFYAFPSISSTGL-------------------------S--SEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT 358 (378)
T ss_pred CCeeEEEEEeccCCCC-------------------------C--HHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC
Confidence 56666655432 2111 0 234566654 4576555443332 35799999873
Q ss_pred CCCcHHHHHHHHHHHHHHHHhC
Q 037144 481 SMTMESHVRAAWTVVQEHLEAF 502 (502)
Q Consensus 481 ~~t~~~di~~~~~~l~~~~~~~ 502 (502)
++++++++++.|+++.+++
T Consensus 359 ---~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 359 ---SLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred ---CHHHHHHHHHHHHHHHhhc
Confidence 4679999999999987653
No 78
>PLN00175 aminotransferase family protein; Provisional
Probab=99.88 E-value=4e-20 Score=190.29 Aligned_cols=329 Identities=12% Similarity=0.104 Sum_probs=220.8
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
|..+.+.+...+......|....+..++++.+.+++.+.+|.+-+. ....++|+|+++++..++.+..+
T Consensus 69 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~----~~~I~vt~G~~~al~~~~~~l~~------- 137 (413)
T PLN00175 69 PDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDP----EKEVTVTSGCTEAIAATILGLIN------- 137 (413)
T ss_pred CHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCHHHHHHHHHHHhCC-------
Confidence 4556666666665444567777788899999999999988864221 01478899999998766654432
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|++.++.|..+...++..|+ +++.||++++ ++.+|+++|++++.+.+ .+|+++.++|+||.+
T Consensus 138 ----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~-~~~~~~~~l~~~~~~~~------k~i~i~~p~NPtG~~ 203 (413)
T PLN00175 138 ----PGDEVILFAPFYDSYEATLSMAGA---KIKTVTLRPP-DFAVPEDELKAAFTSKT------RAILINTPHNPTGKM 203 (413)
T ss_pred ----CCCEEEEeCCCchhHHHHHHHcCC---EEEEEECCcc-cCCCCHHHHHHhcCcCc------eEEEecCCCCCCCcC
Confidence 678888899999999999999999 9999999754 37999999999986543 377888999999998
Q ss_pred C---ChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhh
Q 037144 250 D---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLST 323 (502)
Q Consensus 250 d---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~ 323 (502)
- ++++|+++|++||+|+++|.+|....+.. ..... +.+...-..+..++.|.++ ....+|+++.. +.... .
T Consensus 204 ~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~-~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~-~~l~~-~ 280 (413)
T PLN00175 204 FTREELELIASLCKENDVLAFTDEVYDKLAFEG-DHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAP-PHLTW-G 280 (413)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEecccCccccCC-cccChhhCCCCcCcEEEEecchhhccCcchheeeeEeC-HHHHH-H
Confidence 5 57889999999999999999997765421 11111 1121122355677999997 44567877764 33322 2
Q ss_pred hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
+.....+... ....+..+++.+.+ +...+++..+++.++++.+.+.|++. ++++
T Consensus 281 l~~~~~~~~~-----------------------~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 336 (413)
T PLN00175 281 VRQAHSFLTF-----------------------ATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV-GFKV 336 (413)
T ss_pred HHHHHhhccC-----------------------CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCee
Confidence 2111111100 01222333334333 44567888888999999999999987 7886
Q ss_pred ecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC-----CEEEE
Q 037144 402 AFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG-----GIYVL 474 (502)
Q Consensus 402 ~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~-----g~~~l 474 (502)
. +|..+++.| ++.+.+. . ...++.+.+.+ .|..+.++..+. +..++
T Consensus 337 ~-~p~g~~f~~~~~~~~~~----------------------~----~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~i 389 (413)
T PLN00175 337 Y-PSSGTYFVMVDHTPFGF----------------------E----NDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLV 389 (413)
T ss_pred c-CCCeeEEEEEeccccCC----------------------C----CHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEE
Confidence 5 455555444 3322110 0 02356666654 477666554442 34689
Q ss_pred EEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 475 RFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 475 R~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
|++++. +++++++.++.|.++.+
T Consensus 390 Rls~~~---~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 390 RFAFCK---DEETLRAAVERMKTKLK 412 (413)
T ss_pred EEEEcC---CHHHHHHHHHHHHHHHh
Confidence 999973 57799999999988765
No 79
>PLN02822 serine palmitoyltransferase
Probab=99.88 E-value=1.5e-19 Score=188.53 Aligned_cols=334 Identities=10% Similarity=0.056 Sum_probs=208.8
Q ss_pred HHHHHHHHHhhcCCCCcccccCh---hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSP---AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK 166 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p---~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~ 166 (502)
+..+.+.+...+...+.++..++ +......++.+.+++++|.++ ..++++|++ ++..++.+...
T Consensus 125 ~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~--------~i~~s~G~~-a~~sai~a~~~---- 191 (481)
T PLN02822 125 NEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPD--------SILYSYGLS-TIFSVIPAFCK---- 191 (481)
T ss_pred CHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCC--------EEEECCHHH-HHHHHHHHhCC----
Confidence 34455555555544333333222 234556666677888888764 356666655 56555543322
Q ss_pred HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc---CCcc-EEEEEecC
Q 037144 167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA---ELIP-LFLCATVG 242 (502)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~---g~~p-~~Vv~t~g 242 (502)
++++|++....|+++..++++.|. +++.++.+ |.++|+..+++..+. ...+ .+|++...
T Consensus 192 -------~gd~Ii~d~~~H~s~~~~~~ls~~---~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i 254 (481)
T PLN02822 192 -------KGDIIVADEGVHWGIQNGLYLSRS---TIVYFKHN-------DMESLRNTLEKLTAENKRKKKLRRYIVVEAI 254 (481)
T ss_pred -------CCCEEEEeCCccHHHHHHHHHcCC---eEEEECCC-------CHHHHHHHHHHHhhhhcccCCCcEEEEEecC
Confidence 677888999999999999999988 89998865 556777776643322 1122 57888888
Q ss_pred CccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhh--cCC--CCCCeeEEccCCcCCCCCcceEEEeeCch
Q 037144 243 TTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGV--ECVDSFSFNPHKWLFTTLDCCCLWVKDPS 318 (502)
Q Consensus 243 tt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~--~~~--~~aDsi~~~~hK~l~~p~~~g~~~~r~~~ 318 (502)
.+++|.+-|+++|.++|++||+++++|.+|+.+.+ ....+... .++ ...|.++.+++|.++++. |+++. ++.
T Consensus 255 ~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvl-G~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G--G~i~g-~~~ 330 (481)
T PLN02822 255 YQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVL-GKSGRGLSEHFGVPIEKIDIITAAMGHALATEG--GFCTG-SAR 330 (481)
T ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEECCcccccc-CCCCCChHHHcCCCCCCCeEEEecchhhhhhCC--eEEEc-CHH
Confidence 88999999999999999999999999999974443 22122111 123 367899999999997443 55544 443
Q ss_pred hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144 319 CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK 397 (502)
Q Consensus 319 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 397 (502)
...........|.+. .+.+ ..+.+...+++.+ +...++.+++.+++++|++.|++.+
T Consensus 331 ii~~~~~~~~~~~fs--------------------a~lPp~~~~Aa~~aL~~l--~~~~~~~~~l~~~~~~l~~~L~~~~ 388 (481)
T PLN02822 331 VVDHQRLSSSGYVFS--------------------ASLPPYLASAAITAIDVL--EDNPSVLAKLKENIALLHKGLSDIP 388 (481)
T ss_pred HHHHHHhcCCceeec--------------------cccCHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcC
Confidence 332211122222221 1111 0112222344332 2235788899999999999999988
Q ss_pred CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEee---eEC---C
Q 037144 398 RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHA---IVG---G 470 (502)
Q Consensus 398 ~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~---~~~---g 470 (502)
|+++..++..+++.+.+..... ..+.......++.++|. ++|.+ +.+. .+. .
T Consensus 389 g~~~~~~~~spi~~l~l~~~~~--------------------~~~~~~~~~~~~~~~Ll~e~GV~-v~~~~~~~~~~~~~ 447 (481)
T PLN02822 389 GLSIGSNTLSPIVFLHLEKSTG--------------------SAKEDLSLLEHIADRMLKEDSVL-VVVSKRSTLDKCRL 447 (481)
T ss_pred CcccCCCCCCCEEEEEeCCCcc--------------------cccchHHHHHHHHHHHHhcCCEE-EEeeCCCCcCCCCC
Confidence 8888766667777777743100 00001233467788887 56764 4432 221 2
Q ss_pred EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 471 IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 471 ~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
...+|++++.. .+++||+++++.|++++.+
T Consensus 448 ~~~lRi~is~~-~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 448 PVGIRLFVSAG-HTESDILKASESLKRVAAS 477 (481)
T ss_pred CCcEEEEECCC-CCHHHHHHHHHHHHHHHHH
Confidence 34799998644 4667999999999988764
No 80
>PLN02187 rooty/superroot1
Probab=99.88 E-value=1.2e-19 Score=188.90 Aligned_cols=340 Identities=10% Similarity=0.054 Sum_probs=217.8
Q ss_pred HHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144 89 VAGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK 167 (502)
Q Consensus 89 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~ 167 (502)
+|..+.+.+...+... ...|....+..++.+.+.+|+.+.+|.+-+. ...++|+|+++++..++.+..+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~-----~~I~it~G~~~al~~~~~~l~~----- 153 (462)
T PLN02187 84 TCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTP-----EDIFLTAGCNQGIEIVFESLAR----- 153 (462)
T ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCc-----ccEEEeCCHHHHHHHHHHHhcC-----
Confidence 3444555555544332 3456666777889999999998877753221 2689999999998777665543
Q ss_pred hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
+++.|+++.++++.+...++..|+ +++.+++.+++++.+|+++|++++++.+ .+|+++.++|+||
T Consensus 154 ------pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~~~l~~~~~~~~d~~~l~~~~~~~~------~~v~i~nP~NPTG 218 (462)
T PLN02187 154 ------PNANILLPRPGFPHYDARAAYSGL---EVRKFDLLPEKEWEIDLEGIEAIADENT------VAMVVINPNNPCG 218 (462)
T ss_pred ------CCCEEEEeCCCCccHHHHHHHcCC---EEEEEeCccccCCccCHHHHHHhcCCCc------EEEEEeCCCCCCC
Confidence 678889999999988888999999 9999998654468999999998875433 3788888999999
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CCCeeE-EccCCcCC-CCCcceEEEeeCchhhh
Q 037144 248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-CVDSFS-FNPHKWLF-TTLDCCCLWVKDPSCLL 321 (502)
Q Consensus 248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~aDsi~-~~~hK~l~-~p~~~g~~~~r~~~~l~ 321 (502)
.+-+ +++|+++|++||+|+++|.+|+...+..+.+... ..+. ...+++ .++.|.++ ....+|+++..++....
T Consensus 219 ~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~-~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~ 297 (462)
T PLN02187 219 NVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSM-GKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVF 297 (462)
T ss_pred CccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeH-HHhccCCcEEEEecchhhcCCccceeEEEEecCchhHH
Confidence 9865 8889999999999999999997755422111111 1111 122444 56999965 45668888875442111
Q ss_pred ---hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144 322 ---STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTS 395 (502)
Q Consensus 322 ---~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~ 395 (502)
..+.....+..- .. ....+..+++...+ ..+.+++..+.+.+.++++.+.|++
T Consensus 298 ~~~~~~~~~~~~~~~-------------------~~--~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~ 356 (462)
T PLN02187 298 ETTKVLQSIKQNLDV-------------------TP--DPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKD 356 (462)
T ss_pred HHHHHHHHHHHhccc-------------------cC--CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 111111011000 00 00123333333333 3466788888889999999999998
Q ss_pred CCCeEEecCCCeeEEEEE-eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHH-HHHhcCcEEEEeeeECCEEE
Q 037144 396 DKRFEVAFPRNFSLVCFR-VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLE-SINVSGKVFMTHAIVGGIYV 473 (502)
Q Consensus 396 ~~~~~l~~~~~~~~v~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~~g~~~~~~~~~~g~~~ 473 (502)
++++..+..|..+++.|. +...... ... + ..+++. .+.++|.++.++..++...+
T Consensus 357 ~~~~~~~~~P~gg~fl~~~l~~~~~~-------------------~~~--~--~~~~~~~ll~~~gV~v~pG~~fg~~~~ 413 (462)
T PLN02187 357 IPCVVCPKKPESCTYLLTKLELSLMD-------------------NIK--D--DIDFCVKLAREENLVFLPGDALGLKNW 413 (462)
T ss_pred CCCCcCCCCCCEeEEEEeecChhhCC-------------------CCC--C--HHHHHHHHHhhCCEEEECccccCCCCe
Confidence 865543334555454443 3211000 000 0 123333 33556766665555555689
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 474 LRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 474 lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+|++++. .++.++.+++.|.+++++
T Consensus 414 iRis~~~---~~e~l~~al~rL~~~l~~ 438 (462)
T PLN02187 414 MRITIGV---EAHMLEDALERLKGFCTR 438 (462)
T ss_pred EEEEeCC---CHHHHHHHHHHHHHHHHH
Confidence 9999973 577899999998887654
No 81
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.88 E-value=8e-20 Score=188.32 Aligned_cols=341 Identities=12% Similarity=0.068 Sum_probs=218.1
Q ss_pred HHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccC-cCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144 89 VAGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFL-FSGNGGGVIQGTTCEALLCTLTAARDRVLK 166 (502)
Q Consensus 89 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~-~~~~~~g~~t~ggt~a~~~al~~a~~~~~~ 166 (502)
++..+.+.+...++.. ...|....+..++.+.+.+|+.+.++.++... .......++|+|+++++..++.+...
T Consensus 51 p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~---- 126 (412)
T PTZ00433 51 TPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCD---- 126 (412)
T ss_pred CCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcC----
Confidence 5666777777666543 34566555678899999999988765110000 00012689999999998877765543
Q ss_pred HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144 167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246 (502)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~ 246 (502)
+++.|+++.++|..+...++..|+ +++.+|++.+.++.+|+++|++++++.+ .+|+++.++|+|
T Consensus 127 -------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~~------~~i~~~~p~NPt 190 (412)
T PTZ00433 127 -------EGDNILVPAPGFPHYETVCKAYGI---EMRFYNCRPEKDWEADLDEIRRLVDDRT------KALIMTNPSNPC 190 (412)
T ss_pred -------CCCEEEEccCCcccHHHHHHHcCC---EEEEEecCccccCcCCHHHHHHHhccCc------eEEEEeCCCCCC
Confidence 677888999999999999999999 9999999765567999999998886533 367888999999
Q ss_pred ccc---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CCC-eeEEccCCcC-CCCCcceEEEeeCch--
Q 037144 247 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-CVD-SFSFNPHKWL-FTTLDCCCLWVKDPS-- 318 (502)
Q Consensus 247 G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~aD-si~~~~hK~l-~~p~~~g~~~~r~~~-- 318 (502)
|.+ +++++|+++|+++|+++++|.+|..+......+.. +..+. ..+ .++.++.|.+ .....+|+++..++.
T Consensus 191 G~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~ 269 (412)
T PTZ00433 191 GSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTS-VADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGN 269 (412)
T ss_pred CcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccc-hhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCccc
Confidence 986 45888899999999999999999765432111111 11111 112 4456799998 456778988863321
Q ss_pred --hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--c-HHHHHHHHHHHHHHHHHHHHHH
Q 037144 319 --CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--G-VANLRNFIRSHVGMAKLFERLV 393 (502)
Q Consensus 319 --~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g-~~g~~~~~~~~~~la~~l~~~l 393 (502)
.+.+.+.... +... ....+...++...+ + ...+++..+++.+.++.+.+.|
T Consensus 270 ~~~~~~~~~~~~-~~~~-----------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L 325 (412)
T PTZ00433 270 GGDFLDGMKRLG-MLVC-----------------------GPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHI 325 (412)
T ss_pred HHHHHHHHHHHh-hccC-----------------------CCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111100 0000 00122222222222 1 3556777778888899999999
Q ss_pred hcCCCeEEecCCCeeEE-EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeECCE
Q 037144 394 TSDKRFEVAFPRNFSLV-CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVGGI 471 (502)
Q Consensus 394 ~~~~~~~l~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~ 471 (502)
++..++.+. +|+.+++ .++++..... +. ....++.+.+.+ .|..+.++..+...
T Consensus 326 ~~~~~~~~~-~p~gg~f~~~~l~~~~~~-------------------~~----~~~~~~~~~ll~~~gV~v~pg~~f~~~ 381 (412)
T PTZ00433 326 GECIGLSPT-MPRGSMFLMSRLDLEKFR-------------------DI----KSDVEFYEKLLEEENVQVLPGEIFHMP 381 (412)
T ss_pred hcCCCCccc-CCCeeEEEEEEechhhcC-------------------CC----CCHHHHHHHHHHhcCEEEeCccccCCC
Confidence 887677654 4554444 4444321000 00 002356677764 57665555445446
Q ss_pred EEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 472 YVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 472 ~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.++|++++. .+++++++++.|.++.+.
T Consensus 382 ~~iRis~~~---~~e~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 382 GFTRLTISR---PVEVLREAVERIKAFCER 408 (412)
T ss_pred CeEEEEecC---CHHHHHHHHHHHHHHHHH
Confidence 799999963 467899999999887654
No 82
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.88 E-value=6.2e-20 Score=175.91 Aligned_cols=335 Identities=13% Similarity=0.066 Sum_probs=233.9
Q ss_pred CHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144 88 SVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK 167 (502)
Q Consensus 88 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~ 167 (502)
..|..+.+.+...++...++|... ..++-+.+.+|.++.+++.... ...++++| .+.++..+.+.+.+
T Consensus 38 ~~pp~i~~Al~~rvdhGvfGY~~~--~~~~~~ai~~w~~~r~~~~i~~-----e~i~~~p~----VVpgi~~~I~~~T~- 105 (388)
T COG1168 38 PTPPEIIEALRERVDHGVFGYPYG--SDELYAAIAHWFKQRHQWEIKP-----EWIVFVPG----VVPGISLAIRALTK- 105 (388)
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHHHHHhcCCCCCc-----ceEEEcCc----chHhHHHHHHHhCc-
Confidence 445667888888888877777633 3568889999999999985432 24677777 45555655555433
Q ss_pred hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecC-CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144 168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTT-KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246 (502)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~-~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~ 246 (502)
+++.|++..+.++.+.++....|- +++..|+. .++.|.||.++||+++.+.. +.+.+++.|+|++
T Consensus 106 ------~gd~Vvi~tPvY~PF~~~i~~n~R---~~i~~pL~~~~~~y~iD~~~LE~~~~~~~-----vkl~iLCnPHNP~ 171 (388)
T COG1168 106 ------PGDGVVIQTPVYPPFYNAIKLNGR---KVIENPLVEDDGRYEIDFDALEKAFVDER-----VKLFILCNPHNPT 171 (388)
T ss_pred ------CCCeeEecCCCchHHHHHHhhcCc---EEEeccccccCCcEEecHHHHHHHHhcCC-----ccEEEEeCCCCCC
Confidence 667777778899999999999998 99999986 34568999999999998754 2388999999999
Q ss_pred ccc---CChhHHHHHHHHhCCEEEeecccccccccCccchhhh-cCCCCCC-eeE-EccCCcCCCC-CcceEEEeeCchh
Q 037144 247 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI-DGVECVD-SFS-FNPHKWLFTT-LDCCCLWVKDPSC 319 (502)
Q Consensus 247 G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~-~~~~~aD-si~-~~~hK~l~~p-~~~g~~~~r~~~~ 319 (502)
|.+ +.|.+|+++|++||+.++.|..|+-..+....+-... -+...+| +++ .++.|+++.+ ..|+.+++.++..
T Consensus 172 Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~l 251 (388)
T COG1168 172 GRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNREL 251 (388)
T ss_pred CccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHH
Confidence 998 7899999999999999999999977665442221111 0111233 555 4579999844 5677788877654
Q ss_pred hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchH--HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-C
Q 037144 320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLK--LWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS-D 396 (502)
Q Consensus 320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~--~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~ 396 (502)
.. .+...-...... ...++. ++.+.-..|.+++.++++....+.+++.+.+.+ +
T Consensus 252 r~-~~~~~l~~~~~~----------------------~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~ 308 (388)
T COG1168 252 RA-KFLKRLKRNGLH----------------------GPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHL 308 (388)
T ss_pred HH-HHHHHHHHhcCC----------------------CCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 22 221110111110 013333 333444459999999999999999999999976 6
Q ss_pred CCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE---CCEEE
Q 037144 397 KRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV---GGIYV 473 (502)
Q Consensus 397 ~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~ 473 (502)
|++++..|..+.+....+.+-++. ..++.+.+.+++++.++.+.. .|.++
T Consensus 309 P~v~v~~p~gTYL~WLD~r~l~l~---------------------------d~~l~~~ll~~akVal~~G~~FG~~g~gf 361 (388)
T COG1168 309 PGVKVTEPQGTYLAWLDCRELGLD---------------------------DSELAEFLLEEAKVALSPGSTFGEEGSGF 361 (388)
T ss_pred CCcEEecCCCceeeeeeccccCCC---------------------------hHHHHHHHHHhhcEeccCCCccCcCCCce
Confidence 999998555555555555543321 135667777778887776653 35789
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 474 LRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 474 lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+|+.+. ++.+-++++++.|.+..+.
T Consensus 362 ~RlN~a---cpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 362 VRLNFA---CPRAILEEALERLKRALKK 386 (388)
T ss_pred EEEecC---CCHHHHHHHHHHHHHHHhc
Confidence 999765 6777788888888766543
No 83
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.88 E-value=1.1e-20 Score=194.45 Aligned_cols=342 Identities=12% Similarity=0.061 Sum_probs=207.4
Q ss_pred cccccCCCCCCHHHHHHHHHHhhc-CC------CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCch
Q 037144 78 NYFAYFPATSSVAGIVGEMLSSGF-NV------VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTC 150 (502)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~-n~------~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt 150 (502)
+++...++...++..+.+.+...+ .. ....|...+....+|+.+.+++++++|.+.. .++++|||
T Consensus 20 ~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~--------~v~~~sgt 91 (402)
T cd00378 20 ETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYA--------NVQPHSGS 91 (402)
T ss_pred hCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCce--------eeecCCcH
Confidence 355555555444444555554433 11 1223445556678888888999999998743 34445678
Q ss_pred HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH-----HHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHH
Q 037144 151 EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA-----AQIVGIDRKNIRAIKTTKS-SSYGLSAESVLSQI 224 (502)
Q Consensus 151 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a-----a~~~Glg~~~v~~v~~~~~-~~~~~d~~~Le~~i 224 (502)
+|+..++.+... +++.|+++...|.+.... ++..|. +++.++++.+ +++.+|+++|++++
T Consensus 92 ~a~~~~l~~l~~-----------~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~id~~~l~~~i 157 (402)
T cd00378 92 QANLAVYFALLE-----------PGDTIMGLDLSHGGHLTHGSFTKVSASGK---LFESVPYGVDPETGLIDYDALEKMA 157 (402)
T ss_pred HHHHHHHHHhcC-----------CCCEEEEecCccCccccccccccccccce---eEEEecCCcCcccCCcCHHHHHHHH
Confidence 998877766532 677888888887644222 556677 7778877643 15799999999998
Q ss_pred HHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC
Q 037144 225 NLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF 304 (502)
Q Consensus 225 ~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~ 304 (502)
.+.. +.+|+++.+. +|...|+++|+++|++||+++++|++|..+.......... +..+|+++.++|||+.
T Consensus 158 ~~~~-----~~~v~~~~~~--~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~---~~~~dv~~~s~sK~l~ 227 (402)
T cd00378 158 LEFK-----PKLIVAGASA--YPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNP---LPGADVVTTTTHKTLR 227 (402)
T ss_pred HhCC-----CCEEEecCcc--cCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCc---ccCCcEEEeccccCCC
Confidence 6421 3356655543 4677899999999999999999999975544321111111 1257899999999996
Q ss_pred CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHH
Q 037144 305 TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVG 384 (502)
Q Consensus 305 ~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~ 384 (502)
+|. .|+++..++............+.... +.......+..++......++.++.++..+
T Consensus 228 G~~-gg~i~~~~~~~~~~l~~~~~~~~~~~--------------------~~~~~~~a~~~al~~~~~~~~~~~~~~~~~ 286 (402)
T cd00378 228 GPR-GGLILTRKGELAKKINSAVFPGLQGG--------------------PHLHVIAAKAVALKEALEPEFKAYAKQVVE 286 (402)
T ss_pred CCC-ceEEEeccHHHHHHHHHHhCccccCC--------------------chHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 665 45555554333322211111111100 000011122233333323356778888999
Q ss_pred HHHHHHHHHhcCCCeEEec-CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE
Q 037144 385 MAKLFERLVTSDKRFEVAF-PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM 463 (502)
Q Consensus 385 la~~l~~~l~~~~~~~l~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 463 (502)
+++++.+.|.+. |++++. +...+++++.+.+.+. + ...+.+.+.+.|..+.
T Consensus 287 ~~~~l~~~L~~~-g~~~~~~~~~~~~v~v~~~~~~~-------------------------~--~~~~~~~l~~~gI~v~ 338 (402)
T cd00378 287 NAKALAEALKER-GFKVVSGGTDNHLVLVDLRPKGI-------------------------T--GKAAEDALEEAGITVN 338 (402)
T ss_pred HHHHHHHHHHhC-CCeEeecCCCCeEEEEeCCccCC-------------------------C--HHHHHHHHHHcCcEEc
Confidence 999999999987 888864 3345566666543211 0 1234445555676432
Q ss_pred E---eeeE---CCEEEEEEEecCCC---CcHHHHHHHHHHHHHHHH
Q 037144 464 T---HAIV---GGIYVLRFAAGNSM---TMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 464 ~---~~~~---~g~~~lR~~~~~~~---t~~~di~~~~~~l~~~~~ 500 (502)
. +... .+...+|++++... .+++||+++++.|+++.+
T Consensus 339 ~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~ 384 (402)
T cd00378 339 KNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred CCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 1 1111 13458999875431 257899999999998754
No 84
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.88 E-value=1.6e-19 Score=189.47 Aligned_cols=333 Identities=13% Similarity=0.099 Sum_probs=213.4
Q ss_pred CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC
Q 037144 105 GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT 184 (502)
Q Consensus 105 ~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 184 (502)
...|....+..++.+.+.+|+.+..|.+-+. ..+++|+|+++++..++.+.... +++.|++..+.
T Consensus 108 ~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-----~~I~it~Ga~~al~~~~~~l~~~----------~gD~Vlv~~P~ 172 (481)
T PTZ00377 108 TGAYTDSAGYPFVRKAVAAFIERRDGVPKDP-----SDIFLTDGASSGIKLLLQLLIGD----------PSDGVMIPIPQ 172 (481)
T ss_pred ccCcCcccCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEcCCHHHHHHHHHHHhccC----------CCCEEEECCCC
Confidence 3457777788999999999999888865321 26899999999998777665411 67889999999
Q ss_pred chhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHH
Q 037144 185 HCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQ 261 (502)
Q Consensus 185 H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~ 261 (502)
|..+...++..|. +++.||+++++++.+|+++|++++++..+++.++.+|+++.++|+||.+-+ +++|+++|++
T Consensus 173 y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~ 249 (481)
T PTZ00377 173 YPLYSAAITLLGG---KQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYE 249 (481)
T ss_pred chhHHHHHHHcCC---EEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence 9999999999999 999999986556899999999999865444445667777789999999976 8899999999
Q ss_pred hCCEEEeecccccccccC-ccc---hhhhcCCCC-----CCeeE-EccCCcC-C-CCCcceEEEee--CchhhhhhhcCC
Q 037144 262 FGIWVHVDAAYAGSACIC-PEF---RHFIDGVEC-----VDSFS-FNPHKWL-F-TTLDCCCLWVK--DPSCLLSTLSTN 327 (502)
Q Consensus 262 ~g~~lhVDaA~g~~~~~~-~~~---~~~~~~~~~-----aDsi~-~~~hK~l-~-~p~~~g~~~~r--~~~~l~~~~~~~ 327 (502)
||+|+++|.+|+...+.. ..+ .....++.. ...++ .++.|.+ + ....+|++++. ++..........
T Consensus 250 ~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~ 329 (481)
T PTZ00377 250 KGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLA 329 (481)
T ss_pred CCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHh
Confidence 999999999997654311 111 111111111 12444 4689975 3 56778988762 443322221111
Q ss_pred cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-----cH-------HHHHHHHHHHHHHHHHHHHHHhc
Q 037144 328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-----GV-------ANLRNFIRSHVGMAKLFERLVTS 395 (502)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g~-------~g~~~~~~~~~~la~~l~~~l~~ 395 (502)
..++. ...+...++...+ +. +..++..+++.+.++.+.+.|++
T Consensus 330 ~~~~~-------------------------~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~ 384 (481)
T PTZ00377 330 SINLC-------------------------SNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNK 384 (481)
T ss_pred heecC-------------------------CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 01100 0122223333322 11 11223333457778889999999
Q ss_pred CCCeEEecCCCeeEEEEE-ee-cCcchhhhhhcccCCCcccccccchhHhhHHHHHHH-HHHHHhcCcEEEEeeeEC---
Q 037144 396 DKRFEVAFPRNFSLVCFR-VT-PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNREL-LESINVSGKVFMTHAIVG--- 469 (502)
Q Consensus 396 ~~~~~l~~~~~~~~v~f~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~~g~~~~~~~~~~--- 469 (502)
++++++. +|+.+++.|. +. +....... ....... ...+ ...+.+.|..++++..+.
T Consensus 385 ~~g~~~~-~p~gg~fl~~~~~l~~~~~~~~----------------~~~~~~~-~~~~~~~ll~~~gV~v~pG~~F~~~~ 446 (481)
T PTZ00377 385 IEGVSCQ-PVEGAMYAFPRIELPEKAIQEA----------------KERGLAP-DVLYCLELLESTGIVVVPGSGFGQKP 446 (481)
T ss_pred CCCcEee-cCCeeEEEEeeccCchhhHHHH----------------HhcCCCc-HHHHHHHHHHHcCEEEeCCcccCCCC
Confidence 8888876 5666666653 32 11100000 0000000 1122 334445677666655554
Q ss_pred CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 470 GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 470 g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+..++|++++ +++++++++++.|.++.++
T Consensus 447 ~~~~~Rls~~---~~~e~l~~~l~rl~~~~~~ 475 (481)
T PTZ00377 447 GTYHFRITIL---PPEEQIEEMVKKIKEFHES 475 (481)
T ss_pred CCCEEEEEEC---CCHHHHHHHHHHHHHHHHH
Confidence 3468999986 4677899999999887654
No 85
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.88 E-value=2.6e-21 Score=194.87 Aligned_cols=337 Identities=12% Similarity=0.007 Sum_probs=214.8
Q ss_pred cCCCCCCHHHHHHHHHHhhc----CCCCccc---ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEc-CCchHHH
Q 037144 82 YFPATSSVAGIVGEMLSSGF----NVVGLDW---ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQ-GTTCEAL 153 (502)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~~----n~~~~~~---~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t-~ggt~a~ 153 (502)
+.+++...|..+.+.+...+ +...+.+ .-++.+.++-+++.+.+++++|.++.. ..+++ ++||.++
T Consensus 7 ~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~------~v~~~~gsgt~~~ 80 (360)
T PRK05355 7 FSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNY------KVLFLQGGASLQF 80 (360)
T ss_pred ccCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------EEEEEcCCchHHH
Confidence 44666666666655555443 2222222 244566688999999999999985432 45555 5555555
Q ss_pred HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHH-HHHHHHhcCC
Q 037144 154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLS-QINLDVEAEL 232 (502)
Q Consensus 154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~-~i~~~~~~g~ 232 (502)
-.+++.... .+.+.++|..+..+|.. .+.++.+|. . ..++.++. .+..+..++++ +|+++
T Consensus 81 Ea~~~nl~~--------~g~~~l~i~~G~fg~r~-~~~a~~~g~---~-~~~~~~~~-~g~~~~~~~~~~~l~~~----- 141 (360)
T PRK05355 81 AMVPMNLLG--------GGKKADYVDTGSWSKKA-IKEAKKYGE---V-NVAASSED-DGFTYIPPLDEWQLSDD----- 141 (360)
T ss_pred HHHHHhcCC--------CCCeEEEEECCHHHHHH-HHHHHHhCC---c-eEEecccc-cCCCCCCChhhccCCCC-----
Confidence 444333222 11134555555555544 667788887 5 66665531 23555555555 56443
Q ss_pred ccEEEEEecCCccccccC-ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceE
Q 037144 233 IPLFLCATVGTTAITAVD-PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCC 311 (502)
Q Consensus 233 ~p~~Vv~t~gtt~~G~id-pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~ 311 (502)
+.+|.+++..|+||.+. ||++| +|++++||++++.+..+++-. ..|++++++||+++ |.|.|+
T Consensus 142 -~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~--------~~d~~~~ssqK~lg-P~Glg~ 205 (360)
T PRK05355 142 -AAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVS--------KFGLIYAGAQKNIG-PAGLTI 205 (360)
T ss_pred -CCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCHH--------HccEEEEecccccc-CCceEE
Confidence 34899999999999997 88877 899999999998888776532 45799999999986 999999
Q ss_pred EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHH
Q 037144 312 LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLF 389 (502)
Q Consensus 312 ~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l 389 (502)
++++++..- ..-...+.|+...... . ...+. ++-. ....++..+++.+-.+ |++++.+++.++++++
T Consensus 206 l~~s~~~l~-~~~~~~~~~~~~~~~~--------~-~~~~~-~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l 274 (360)
T PRK05355 206 VIVREDLLG-RALPSIPSMLDYKTHA--------D-NDSMY-NTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALL 274 (360)
T ss_pred EEECHHHHh-hcccCCChHHHHHHHH--------h-cCCcc-CCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 999876542 1111112222211000 0 00011 1111 1335777888888778 8999999999999999
Q ss_pred HHHHhcCCCeEEecC--CCe-eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee
Q 037144 390 ERLVTSDKRFEVAFP--RNF-SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA 466 (502)
Q Consensus 390 ~~~l~~~~~~~l~~~--~~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 466 (502)
++.|++++.+..+.+ ..+ .+++|.++.. ....++.+.+.++|.++ ...
T Consensus 275 ~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~----------------------------~~~~~~~~~~~~~Gi~~-~~~ 325 (360)
T PRK05355 275 YDAIDSSDFYRNPVAPEDRSRMNVPFTLADE----------------------------ELDKKFLAEAKAAGLVG-LKG 325 (360)
T ss_pred HHHHHhCCCcccCCChhhcCCcEEEEEcCCh----------------------------HHHHHHHHHHHHCCCcc-cCC
Confidence 999999964334322 234 4678876431 11245666777788864 322
Q ss_pred eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 467 IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 467 ~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
. ...+.+|+|+.++ ++++||++++++|+++.+.
T Consensus 326 ~-~~~g~vRiS~~~~-nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 326 H-RSVGGMRASIYNA-MPLEGVQALVDFMKEFERR 358 (360)
T ss_pred C-CccCcEEEECCCC-CCHHHHHHHHHHHHHHHHh
Confidence 2 2246899998654 6677999999999998753
No 86
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.88 E-value=7.2e-20 Score=185.94 Aligned_cols=336 Identities=13% Similarity=0.077 Sum_probs=203.0
Q ss_pred CCCCCCcccccCCCCCCHHHHHHHHHHhhcCCC---CcccccCh---hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE
Q 037144 72 THWQSPNYFAYFPATSSVAGIVGEMLSSGFNVV---GLDWISSP---AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI 145 (502)
Q Consensus 72 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~---~~~~~~~p---~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~ 145 (502)
.+|.+-.|+|+-..++..+. +.+.+..+..+. +.+...++ +...+-.++.+.+++++|.+. .++
T Consensus 7 ~~~~s~~YL~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~---------~l~ 76 (370)
T PRK05937 7 IDFVTNDFLGFSRSDTLVHE-VEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE---------AFI 76 (370)
T ss_pred EEeECCCccCCCCCHHHHHH-HHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe---------EEE
Confidence 45777889998765443333 444444443221 12222222 245667778888999999864 355
Q ss_pred cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHH
Q 037144 146 QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQIN 225 (502)
Q Consensus 146 t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~ 225 (502)
.++|+.+|+ ++..+... +++.|+++...|.|+..+++.+.- ..+.++ ..|+++|+++|+
T Consensus 77 ~~sG~~a~~-~~~~~~~~----------~~d~ii~d~~~H~sv~~~~~~~~~---~~~~~~-------~~d~~~l~~~l~ 135 (370)
T PRK05937 77 VPSGYMANL-GLCAHLSS----------VTDYVLWDEQVHISVVYSLSVISG---WHQSFR-------HNDLDHLESLLE 135 (370)
T ss_pred ECChHHHHH-HHHHHhCC----------CCCEEEEEhhhhHHHHHHHHHcCC---ceEEec-------CCCHHHHHHHHH
Confidence 566667775 33222111 467888889999999999887652 333333 468999999998
Q ss_pred HHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhh--cCCCCCCeeEEccCCcC
Q 037144 226 LDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGVECVDSFSFNPHKWL 303 (502)
Q Consensus 226 ~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~--~~~~~aDsi~~~~hK~l 303 (502)
+..+.+....+|+++..++++|.+.|+++|.++|+++|+++|||+||+.+.+..+. +... .+....+.+..+++|.+
T Consensus 136 ~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g-~g~~~~~~~~~~~~~~~tlsK~~ 214 (370)
T PRK05937 136 SCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDG-KGFCHSLGYENFYAVLVTYSKAL 214 (370)
T ss_pred hhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCC-CchHHhhCCCCCcEEEEechhhh
Confidence 65432223456778889999999999999999999999999999999876554321 1110 12223345667788987
Q ss_pred CCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHH
Q 037144 304 FTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHV 383 (502)
Q Consensus 304 ~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~ 383 (502)
+ |.|+++++.++ ..........+|.+... .......++..+++.+-.++ ....++..
T Consensus 215 g-~~G~~vl~~~~--~~~~~~~~~~~~~~s~~-------------------~~~~~~~a~~aal~~l~~~~-~~~~~~l~ 271 (370)
T PRK05937 215 G-SMGAALLSSSE--VKQDLMLNSPPLRYSTG-------------------LPPHLLISIQVAYDFLSQEG-ELARKQLF 271 (370)
T ss_pred h-cCceEEEcCHH--HHHHHHHhCCCCeecCC-------------------CCHHHHHHHHHHHHHHHhCc-HHHHHHHH
Confidence 5 56777665432 11111111122322110 00112234445565553333 34567788
Q ss_pred HHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE
Q 037144 384 GMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM 463 (502)
Q Consensus 384 ~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 463 (502)
+++++|.+.|.... + ..++.+.+... ....+.+.|.++|. ++
T Consensus 272 ~l~~~l~~~l~~~~------~--~~~~~i~~~~~-----------------------------~~~~~~~~L~~~gi-~v 313 (370)
T PRK05937 272 RLKEYFAQKFSSAA------P--GCVQPIFLPGI-----------------------------SEQELYSKLVETGI-RV 313 (370)
T ss_pred HHHHHHHHhcCCCC------C--CCEEEEEeCCh-----------------------------hHHHHHHHHHHCCe-eE
Confidence 88899988875431 0 01122333221 12456677777786 34
Q ss_pred EeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 464 THAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 464 ~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.........++|+++. ..++++||+++++.|+++.++
T Consensus 314 ~~~~~~~~~~iRis~~-~~~t~edid~l~~~L~~~~~~ 350 (370)
T PRK05937 314 GVVCFPTGPFLRVNLH-AFNTEDEVDILVSVLATYLEK 350 (370)
T ss_pred EeeCCCCCCEEEEEcC-CCCCHHHHHHHHHHHHHHHHH
Confidence 4322233458999985 556777999999999988764
No 87
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.87 E-value=7.1e-20 Score=188.01 Aligned_cols=302 Identities=13% Similarity=0.062 Sum_probs=197.0
Q ss_pred hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH
Q 037144 113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA 192 (502)
Q Consensus 113 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa 192 (502)
+..++..++.+++++++|.++ ..++|+ |++++..++.+... +++.|++++..|+++...+
T Consensus 84 G~~~l~~~l~~~la~~~g~~~--------~i~~ts-G~~a~~~~~~~l~~-----------~gd~vi~~~~~~~~~~~~~ 143 (397)
T PRK06939 84 GTQDLHKELEEKLAKFLGTED--------AILYSS-CFDANGGLFETLLG-----------KEDAIISDALNHASIIDGV 143 (397)
T ss_pred CCcHHHHHHHHHHHHHhCCCc--------EEEEcC-hHHHHHHHHHHhCC-----------CCCEEEEEhhhhHHHHHHH
Confidence 456778889999999999753 345555 58888766554322 6788999999999999999
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
+..|. +++.++. +|+++|++++++....+.++.+|+.....+.+|.+.++++|.++|++||+|+++|++|
T Consensus 144 ~~~~~---~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~ 213 (397)
T PRK06939 144 RLCKA---KRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSH 213 (397)
T ss_pred HhcCC---ceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcc
Confidence 99998 8777653 4889999998764333334566776667788999999999999999999999999999
Q ss_pred ccccccCc-cchhhhcCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccCCCc
Q 037144 273 AGSACICP-EFRHFIDGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVGYKD 349 (502)
Q Consensus 273 g~~~~~~~-~~~~~~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~ 349 (502)
+.+.+... .......++ .+.|+++.++||+++.+ ..|+++.+ +.... .+.. ...+...
T Consensus 214 ~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~-r~G~v~~~-~~~~~-~l~~~~~~~~~~---------------- 274 (397)
T PRK06939 214 AVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGA-SGGYTAGR-KEVID-WLRQRSRPYLFS---------------- 274 (397)
T ss_pred cccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCcc-CceEEEeC-HHHHH-HHHHhCcccccc----------------
Confidence 64332211 000111122 35789999999999655 45776654 33332 2211 1111111
Q ss_pred ccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhccc
Q 037144 350 WQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYK 428 (502)
Q Consensus 350 ~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~ 428 (502)
++.. ..+.++..+++.+. ...++.++..++++++.+.|++. ++++. ++..+++.+...+
T Consensus 275 ----~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~------------ 334 (397)
T PRK06939 275 ----NSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAA-GFTLG-PGEHPIIPVMLGD------------ 334 (397)
T ss_pred ----CCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEECC------------
Confidence 0100 01122333444431 22467788889999999999887 67664 3444555444321
Q ss_pred CCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE----CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 429 NGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV----GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.....++.++|.++|..+. +..+ .+..++|++++.. .++++|+++++.|+++.++
T Consensus 335 ----------------~~~~~~~~~~L~~~gI~v~-~~~~~~~~~~~~~iRi~~~~~-~~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 335 ----------------AKLAQEFADRLLEEGVYVI-GFSFPVVPKGQARIRTQMSAA-HTKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred ----------------HHHHHHHHHHHHHCCceEe-eeCCCCCCCCCceEEEEECCC-CCHHHHHHHHHHHHHHHHH
Confidence 1113567788888886544 3322 2346899998644 4567999999999988765
No 88
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.87 E-value=5.9e-20 Score=185.49 Aligned_cols=306 Identities=16% Similarity=0.139 Sum_probs=194.5
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144 109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF 188 (502)
Q Consensus 109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (502)
..+|...++|+ .+++++|.+ ..++++|||+|+..++.+.+.. +++.|+++..+|.+.
T Consensus 15 ~~~~~~~~~~~----~la~~~~~~---------~~~~~~sgt~al~~~l~~l~~~----------~gd~vl~~~~~~~~~ 71 (352)
T cd00616 15 TLGPKVREFEK----AFAEYLGVK---------YAVAVSSGTAALHLALRALGIG----------PGDEVIVPSFTFVAT 71 (352)
T ss_pred cCCHHHHHHHH----HHHHHhCCC---------eEEEECCHHHHHHHHHHHcCCC----------CCCEEEeCCcchHHH
Confidence 34555555555 467777753 3688899999998877665311 577899999999999
Q ss_pred HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144 189 QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 189 ~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV 268 (502)
..++...|+ +++.+++++ .++.+|+++|++++++++ .+|++++ ++|...|+++|.++|+++|+++++
T Consensus 72 ~~~~~~~g~---~~~~~~~~~-~~~~~d~~~l~~~i~~~~------~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~ 138 (352)
T cd00616 72 ANAILLLGA---TPVFVDIDP-DTYNIDPELIEAAITPRT------KAIIPVH---LYGNPADMDAIMAIAKRHGLPVIE 138 (352)
T ss_pred HHHHHHcCC---eEEEEecCC-CcCCcCHHHHHHhcCcCC------eEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEE
Confidence 999999999 999999975 257899999999885433 3566553 689999999999999999999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEc--cCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCccccc
Q 037144 269 DAAYAGSACICPEFRHFIDGVECVDSFSFN--PHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEV 345 (502)
Q Consensus 269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~--~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~ 345 (502)
|+||+.+....... +.. ..|..+++ .|||+..+ ..|+++++++......... ...+... ..
T Consensus 139 D~a~~~g~~~~~~~---~~~--~~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 202 (352)
T cd00616 139 DAAQALGATYKGRK---VGT--FGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRD----------RF 202 (352)
T ss_pred ECCCCCCCeECCEE---ccc--CcceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCC----------CC
Confidence 99997654432211 111 24555555 55999544 3466666655443221100 0000000 00
Q ss_pred CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----CeeEEEEEeecC-cc
Q 037144 346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-----NFSLVCFRVTPS-AV 419 (502)
Q Consensus 346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-----~~~~v~f~~~~~-~~ 419 (502)
.+........-+...+.....+ ...+++.++.++..++++++++.|+++++++++.++ ...+++|.+.+. +.
T Consensus 203 ~~~~~~~~~~~~~~~~~aa~~~--~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (352)
T cd00616 203 KYEHEILGYNYRLSEIQAAIGL--AQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGE 280 (352)
T ss_pred ccccceeeeccCcCHHHHHHHH--HHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCC
Confidence 0000011111112223333333 344677888899999999999999999999987543 235677776431 10
Q ss_pred hhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEE---EEeeeEC--------------------CEEEEEE
Q 037144 420 MDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVF---MTHAIVG--------------------GIYVLRF 476 (502)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~--------------------g~~~lR~ 476 (502)
...++.+.|.++|+.. +.+.... ....+|+
T Consensus 281 ---------------------------~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l 333 (352)
T cd00616 281 ---------------------------SRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSL 333 (352)
T ss_pred ---------------------------CHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEc
Confidence 1235666666667621 1111110 0258999
Q ss_pred EecCCCCcHHHHHHHHHHHH
Q 037144 477 AAGNSMTMESHVRAAWTVVQ 496 (502)
Q Consensus 477 ~~~~~~t~~~di~~~~~~l~ 496 (502)
++ ++.++++||++++++|+
T Consensus 334 ~~-~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 334 PL-HPSLTEEEIDRVIEALR 352 (352)
T ss_pred cC-CCCCCHHHHHHHHHHhC
Confidence 97 46677889999999874
No 89
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.87 E-value=5.2e-19 Score=181.78 Aligned_cols=342 Identities=12% Similarity=0.075 Sum_probs=213.5
Q ss_pred HHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 90 AGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
+..+.+.+...+... ...|....+..++++.+.+++....|.+-.. ...++|+|+|+++..++.+...
T Consensus 50 ~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-----~~ii~t~G~t~al~~~~~~l~~------ 118 (403)
T TIGR01265 50 DPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTA-----DDVVLTSGCSQAIEICIEALAN------ 118 (403)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCH-----HHEEEecChHHHHHHHHHHhCC------
Confidence 444555555555332 2345555566677777777777655543211 2689999999998877776542
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|+++..+|..+...++..|+ +++.+++++++++.+|++++++++.+.+ .+|+++.++|++|.
T Consensus 119 -----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~i~~p~NPtG~ 184 (403)
T TIGR01265 119 -----PGANILVPRPGFPLYDTRAAFSGL---EVRLYDLLPEKDWEIDLDGLEALADEKT------VAIVVINPSNPCGS 184 (403)
T ss_pred -----CCCEEEEeCCCchhHHHHHHHcCC---EEEEecCCcccCCccCHHHHHHHhCcCc------cEEEEecCCCCCCC
Confidence 577888898999888889999999 9999988654457899999999886543 36888889999999
Q ss_pred cC---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CCC-eeEEccCCcCCC-CCcceEEEeeCc-hhhh
Q 037144 249 VD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-CVD-SFSFNPHKWLFT-TLDCCCLWVKDP-SCLL 321 (502)
Q Consensus 249 id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~aD-si~~~~hK~l~~-p~~~g~~~~r~~-~~l~ 321 (502)
+- ++++|.++|+++|+|+++|++|+......+.+.. +..+. ... .++.++.|.++. ...+|+++..++ ..+.
T Consensus 185 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~ 263 (403)
T TIGR01265 185 VFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIP-MASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFR 263 (403)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccc-hhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhH
Confidence 85 5899999999999999999999766542211111 11111 122 344579998654 467888887543 2111
Q ss_pred h-hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144 322 S-TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFE 400 (502)
Q Consensus 322 ~-~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~ 400 (502)
. .......+.... . +........+-.++.......+.+..++..+.++++.+.|+..++++
T Consensus 264 ~~~~~~~~~~~~~~-----------------~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 325 (403)
T TIGR01265 264 DTVLQGLKNLLQRI-----------------L-GPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLV 325 (403)
T ss_pred HHHHHHHHHHhhhh-----------------c-CCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 1 110000010000 0 00000111222233222235566778888888999999999888887
Q ss_pred EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEEEec
Q 037144 401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRFAAG 479 (502)
Q Consensus 401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~ 479 (502)
+..+.....+.++++..... +.. ...++.+++. +.|..+.++..+....++|++++
T Consensus 326 ~~~p~~g~f~~~~~~~~~~~-------------------~~~----~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~ 382 (403)
T TIGR01265 326 CPKPEGAMYLMVKLELELFP-------------------EIK----DDVDFCEKLVREESVICLPGSAFGLPNWVRITIT 382 (403)
T ss_pred ecCCCceeEEEEeccccccC-------------------CCC----CHHHHHHHHHHhCCEEEeCccccCCCCeEEEEec
Confidence 65444444555555321000 000 0234556543 45766555555555679999997
Q ss_pred CCCCcHHHHHHHHHHHHHHHHh
Q 037144 480 NSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 480 ~~~t~~~di~~~~~~l~~~~~~ 501 (502)
. +++.+++.++.|.++.++
T Consensus 383 ~---~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 383 V---PESMLEEACSRIKEFCER 401 (403)
T ss_pred C---CHHHHHHHHHHHHHHHHh
Confidence 3 467899999999887764
No 90
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.87 E-value=1.5e-19 Score=164.31 Aligned_cols=312 Identities=13% Similarity=0.094 Sum_probs=222.5
Q ss_pred HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK 200 (502)
Q Consensus 121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~ 200 (502)
..+.+++++|++. .-+|.|+-+|-+..|.+.+. +++.|++...+||+-.-||+..|+
T Consensus 66 F~~dlaeFlg~D~---------~R~t~GARe~KfavMhal~~-----------~gd~vV~D~~aHYttyvAAEragl--- 122 (382)
T COG1103 66 FLEDLAEFLGMDE---------VRVTAGAREAKFAVMHALCK-----------EGDWVVVDSLAHYTTYVAAERAGL--- 122 (382)
T ss_pred HHHHHHHHhCCce---------eeecccchhhHHHHHHHhcc-----------CCCEEEEcCcchHHHHHHHHhcCC---
Confidence 3444899999874 67899999999877776654 678888999999999999999999
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcC-CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccC
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAE-LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIC 279 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g-~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~ 279 (502)
+|..||......+.++++...+.|++-.+++ ..|.+.++|++....|.+.|.+.++++|++||+.+.+.+||..+-++.
T Consensus 123 ~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpv 202 (382)
T COG1103 123 NVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPV 202 (382)
T ss_pred eEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccc
Confidence 9999997655579999999999999887765 678999999999999999999999999999999999999999888876
Q ss_pred ccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCC
Q 037144 280 PEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFR 359 (502)
Q Consensus 280 ~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~ 359 (502)
.. +.. ++|+|+.|+||.+.+..+||++-++.... ...+..+..+...... -.+.|+-|..
T Consensus 203 s~-ke~-----g~DFiVgSGHKsmAAs~PiGvl~~~eE~a-e~V~r~Sg~~~~~KEv-------------ellGCT~rGa 262 (382)
T COG1103 203 SG-KEI-----GADFIVGSGHKSMAASAPIGVLAMSEEWA-EIVLRRSGRAFPKKEV-------------ELLGCTVRGA 262 (382)
T ss_pred cc-ccc-----CCCEEEecCccchhccCCeeEEeehhHHH-HHHHhhccccccccee-------------eeecccccCc
Confidence 42 332 89999999999999888899999876532 2233333222211110 0233443322
Q ss_pred -chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEEEEeecCcchhhhhhcccCCCccccc
Q 037144 360 -SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP--RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYR 436 (502)
Q Consensus 360 -al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 436 (502)
...+.+++-.. .+.. ++.+...+.+++|.+.|+++.|+..++. ...-++-|..+.-. .. +
T Consensus 263 pivTlmASfP~V-~eRV-krWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~--eI-------a------ 325 (382)
T COG1103 263 PIVTLMASFPHV-VERV-KRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFH--EI-------A------ 325 (382)
T ss_pred hHHHHHhcCHHH-HHHH-HHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHH--HH-------H------
Confidence 22333333222 2322 4566778899999999999988887763 23345555443210 00 0
Q ss_pred ccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144 437 QFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF 502 (502)
Q Consensus 437 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~ 502 (502)
.+......-|+++|.++|+.-+.++ -..++.+|+ +..+.|++++.+++++++++++
T Consensus 326 -----kk~~r~gyFlY~ELK~RgI~GI~~G---~Tk~~K~sv--yGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 326 -----KKHKRKGYFLYEELKKRGIHGIQPG---QTKYFKLSV--YGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred -----HhCcCCceeeHHHHHhcCccccccC---ceeEEEEEe--ecCCHHHHHHHHHHHHHHHHhc
Confidence 0000011246777888887544442 245888886 4467789999999999998864
No 91
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.87 E-value=1.1e-19 Score=192.21 Aligned_cols=335 Identities=9% Similarity=0.006 Sum_probs=214.3
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCC--CCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDL--PKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK 167 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~--~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~ 167 (502)
|..+.+.+...+.. ...|....+..++.+.+.+++.+..+. +.+ ..++|+|+++++..++.+..+
T Consensus 164 p~~~~~~~~~~~~~-~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~-------~I~it~G~~eal~~~~~~l~~----- 230 (517)
T PRK13355 164 PDEVVYDMAQQLTD-TEGYSDSKGLFSARKAIMQYAQLKGLPNVDVD-------DIYTGNGVSELINLSMSALLD----- 230 (517)
T ss_pred CHHHHHHHHHHhhc-CCCCCCCcChHHHHHHHHHHHHhcCCCCCChh-------HEEEeCcHHHHHHHHHHHhCC-----
Confidence 44444444444432 335776667888999999998766542 332 689999999998777765543
Q ss_pred hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
+++.|+++.+.|..+...++..|. +++.++++++++|.+|+++|+++++++++ +|+++.++|+||
T Consensus 231 ------~Gd~Vli~~P~y~~y~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~~k------~i~i~nP~NPTG 295 (517)
T PRK13355 231 ------DGDEVLIPSPDYPLWTACVNLAGG---TAVHYRCDEQSEWYPDIDDIRSKITSRTK------AIVIINPNNPTG 295 (517)
T ss_pred ------CCCEEEEcCCCCcCHHHHHHHCCC---EEEEeecCcccCCCCCHHHHHHhcCcCce------EEEEECCCCCCC
Confidence 678899999999999999999999 99999998765689999999998865443 788889999999
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeE-EccCCcCC-CCCcceEEEee-Cchhhh
Q 037144 248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFS-FNPHKWLF-TTLDCCCLWVK-DPSCLL 321 (502)
Q Consensus 248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~-~~~hK~l~-~p~~~g~~~~r-~~~~l~ 321 (502)
.+-+ +++|+++|++||+++++|.+|....+....+.....-....-.++ .++.|.++ ....+|++++. +.....
T Consensus 296 ~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~ 375 (517)
T PRK13355 296 ALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAK 375 (517)
T ss_pred cCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHH
Confidence 9966 889999999999999999999765432211111111111222344 45899975 55668888764 232211
Q ss_pred hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhcC
Q 037144 322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV-----ANLRNFIRSHVGMAKLFERLVTSD 396 (502)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~la~~l~~~l~~~ 396 (502)
...... ..+.... .+ ...+..+++...+.. +.+.+ .++..+.++++.+.|+++
T Consensus 376 ~~~~~l-~~~~~~~-----------------~~---~~~~~q~a~~~aL~~~~~~~~~~~~-~~~~~~~r~~l~~~L~~~ 433 (517)
T PRK13355 376 DYIEGL-NMLANMR-----------------LC---SNVPAQSIVQTALGGHQSVKDYLVP-GGRVYEQRELVYNALNAI 433 (517)
T ss_pred HHHHHH-HHHhcCc-----------------CC---cChHHHHHHHHHhcCCccHHHHHHH-HHHHHHHHHHHHHHHhcC
Confidence 111000 0000000 00 123344444444421 12222 234556678899999998
Q ss_pred CCeEEecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEE
Q 037144 397 KRFEVAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYV 473 (502)
Q Consensus 397 ~~~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~ 473 (502)
||+++. +|+.++++| ++..... .... + ...+.+.|.++|.++.++..+. +..+
T Consensus 434 ~g~~~~-~p~g~fy~~~~l~~~~~--------------------~~~~-~--~~~~~~ll~~~gV~v~pg~~F~~~~~~~ 489 (517)
T PRK13355 434 PGISAV-KPKAAFYIFPKIDVKKF--------------------NIHD-D--EQFALDLLHDKKVLIVQGTGFNWDKPDH 489 (517)
T ss_pred CCcccC-CCCeeeEEEeecCcccC--------------------CCCC-H--HHHHHHHHHhCCEEEeCcchhCCCCcCE
Confidence 898875 677787777 3432100 0000 0 1223344556687666655553 4679
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 474 LRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 474 lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+|++++ .++++++.+++.|.+..+.
T Consensus 490 ~Ris~~---~~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 490 FRVVYL---PRLEDLEDAMDRLADFFSY 514 (517)
T ss_pred EEEEeC---CCHHHHHHHHHHHHHHHHH
Confidence 999985 4677999999999887754
No 92
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.87 E-value=1.5e-19 Score=167.43 Aligned_cols=343 Identities=13% Similarity=0.096 Sum_probs=233.8
Q ss_pred cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHH
Q 037144 82 YFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR 161 (502)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~ 161 (502)
+.|++.+.+ +.+..+++.+...+ .+|.+..+.+++.+-+...|...+.. --++.++|+.+.-.|+....
T Consensus 21 ~gPGPsnl~----~~V~~A~~~~~lgh-~sPe~~qIm~~v~egikyVFkT~n~~------tf~isgsGh~g~E~al~N~l 89 (385)
T KOG2862|consen 21 LGPGPSNLS----GRVQEAMSRPSLGH-MSPEFVQIMDEVLEGIKYVFKTANAQ------TFVISGSGHSGWEAALVNLL 89 (385)
T ss_pred ecCCCcCCC----HHHHHhhcCCcccc-CCHHHHHHHHHHHHHHHHHhccCCCc------eEEEecCCcchHHHHHHhhc
Confidence 335544433 44555566655443 67999999999999999999886653 23667777766665555443
Q ss_pred HHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEE
Q 037144 162 DRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCA 239 (502)
Q Consensus 162 ~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~ 239 (502)
+ |++.+++-..+-.+ +...++.+|+ +|..|+.+.++ ...++.++++|.+.+ |.+|.+
T Consensus 90 e-----------Pgd~vLv~~~G~wg~ra~D~~~r~ga---~V~~v~~~~G~--~~~le~i~~~lsqh~-----p~~vfv 148 (385)
T KOG2862|consen 90 E-----------PGDNVLVVSTGTWGQRAADCARRYGA---EVDVVEADIGQ--AVPLEEITEKLSQHK-----PKAVFV 148 (385)
T ss_pred C-----------CCCeEEEEEechHHHHHHHHHHhhCc---eeeEEecCccc--CccHHHHHHHHHhcC-----CceEEE
Confidence 3 66666665555443 5567788999 99999998754 889999999998743 779999
Q ss_pred ecCCccccccCC-hhHHHHHHHHhCCEEEeeccc--ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeC
Q 037144 240 TVGTTAITAVDP-LKPLCDVAKQFGIWVHVDAAY--AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKD 316 (502)
Q Consensus 240 t~gtt~~G~idp-l~eI~~i~~~~g~~lhVDaA~--g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~ 316 (502)
++|.|+||...| ++.+.++|++|+..|+||+.- ||--+..+++ ++|+.-...+|.++.|.|.+.+...+
T Consensus 149 ~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDew--------gVDvaytgSQKaL~aP~GLsiisfS~ 220 (385)
T KOG2862|consen 149 THGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEW--------GVDVAYTGSQKALGAPAGLSIISFSD 220 (385)
T ss_pred EecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhh--------cccEEEecchhhcCCCCCcceeecCH
Confidence 999999999999 788889999999999999754 3433444555 89999999999999999999987766
Q ss_pred chhhh--hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCC---c----hHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 037144 317 PSCLL--STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFR---S----LKLWVVIRNFGVANLRNFIRSHVGMAK 387 (502)
Q Consensus 317 ~~~l~--~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~---a----l~~~~~l~~~g~~g~~~~~~~~~~la~ 387 (502)
+..-. +.-+....|.++.- ...++....-+. |.+. + ..+-++|..+-++|+++.++++.++++
T Consensus 221 ka~~~~~~rK~~~~~~yFd~~-------~~~~~wgc~~e~-~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~ 292 (385)
T KOG2862|consen 221 KALEAIRDRKTKPVSFYFDIL-------RLGNFWGCDGEP-RAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSK 292 (385)
T ss_pred HHHHHHhhccCCceEEEEeHH-------hhcchhccCCcc-cccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54321 11111122222110 000110000000 2211 1 255577778889999999999999999
Q ss_pred HHHHHHhcCCCeEEecC---CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE
Q 037144 388 LFERLVTSDKRFEVAFP---RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT 464 (502)
Q Consensus 388 ~l~~~l~~~~~~~l~~~---~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 464 (502)
+++..|+++ |+++... +.++.+.-.-.|.+. + -+.+..++...+.+.+.
T Consensus 293 ~l~~~l~~~-GLq~fv~~e~~rlptvttv~vp~gv--------------------D-------w~dVv~~~~~~~~vei~ 344 (385)
T KOG2862|consen 293 WLKLSLEAL-GLQLFVVDEELRLPTVTTVKVPYGV--------------------D-------WKDVVAYAMSHYVVEIG 344 (385)
T ss_pred HHHHHHHHh-CccceecChhhccCcceeeecCCCC--------------------C-------HHHHHHHHHHhcCEEec
Confidence 999999998 8887642 234444333333322 1 23556666666665554
Q ss_pred eeeE-CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 465 HAIV-GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 465 ~~~~-~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
++-- -...++||.++.-+.+.+.|+..++.|+....
T Consensus 345 gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq 381 (385)
T KOG2862|consen 345 GGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQ 381 (385)
T ss_pred cccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHh
Confidence 4321 13468999998888888899999999887654
No 93
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.86 E-value=5.5e-20 Score=189.99 Aligned_cols=306 Identities=12% Similarity=0.054 Sum_probs=191.7
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH-
Q 037144 112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK- 190 (502)
Q Consensus 112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~- 190 (502)
+....+|+.+++++++++|.+.. . +++++||+|+..++.+... +++.|+++..+|.++..
T Consensus 67 ~~~~~~e~~~~~~la~~~g~~~~-------~-i~~~sgt~al~~~l~~l~~-----------~gd~Vl~~~~~~~~~~~~ 127 (416)
T PRK00011 67 EYVDVVEQLAIDRAKELFGAEYA-------N-VQPHSGSQANAAVYFALLK-----------PGDTILGMDLAHGGHLTH 127 (416)
T ss_pred hHHHHHHHHHHHHHHHHhCCCce-------e-eecCCchHHHHHHHHHhcC-----------CCCEEEEeccccCCcccc
Confidence 44567887788899999998753 2 4445678888766655422 67788888888865321
Q ss_pred --HH--HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144 191 --AA--QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV 266 (502)
Q Consensus 191 --aa--~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l 266 (502)
.. ...|+ +++.++++.+ ++.+|+++|++++++.. +.+|+++. +.+|...|+++|+++|+++|+++
T Consensus 128 ~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~k~v~~~~--~~~~~~~~~~~I~~la~~~~~~l 196 (416)
T PRK00011 128 GSPVNFSGKLY---NVVSYGVDEE-TGLIDYDEVEKLALEHK-----PKLIIAGA--SAYSRPIDFKRFREIADEVGAYL 196 (416)
T ss_pred cccccccccee---eEeecCcCcc-cCCcCHHHHHHHHHhcC-----CCEEEECC--CcCCCccCHHHHHHHHHHcCCEE
Confidence 11 22345 7788888642 47899999999997521 22555542 45677789999999999999999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144 267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG 346 (502)
Q Consensus 267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (502)
++|+||+.+.......... +..+|.++.++||++.+|. .|+++..++............+...
T Consensus 197 ivD~a~~~g~~~~g~~~~~---~~~~di~~~S~~K~l~g~~-gg~i~~~~~~~~~~l~~~~~~~~~~------------- 259 (416)
T PRK00011 197 MVDMAHIAGLVAAGVHPSP---VPHADVVTTTTHKTLRGPR-GGLILTNDEELAKKINSAVFPGIQG------------- 259 (416)
T ss_pred EEECcchhcccccCccCCC---CCCCcEEEecCCcCCCCCC-ceEEEeCCHHHHHHHHHHhCccccC-------------
Confidence 9999987554322111111 2268999999999996665 4566655444332221111111100
Q ss_pred CCcccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCCeeEEEEEeecCcchhhhh
Q 037144 347 YKDWQITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF-PRNFSLVCFRVTPSAVMDKLR 424 (502)
Q Consensus 347 ~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~-~~~~~~v~f~~~~~~~~~~~~ 424 (502)
+... ...+++.++.....+++.+++++..++++++++.|++. |+++.. ....+++.+.+.+.+.
T Consensus 260 --------~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~~~~----- 325 (416)
T PRK00011 260 --------GPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLRSKGL----- 325 (416)
T ss_pred --------CccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCcccCC-----
Confidence 0000 11233344444445678889999999999999999987 788763 2334666666543210
Q ss_pred hcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee------eECCEEEEEEEecC---CCCcHHHHHHHHHHH
Q 037144 425 TKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA------IVGGIYVLRFAAGN---SMTMESHVRAAWTVV 495 (502)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~------~~~g~~~lR~~~~~---~~t~~~di~~~~~~l 495 (502)
....+.+.|.+.|..+-.+. .......+|++... ...+++|++++++.|
T Consensus 326 ----------------------~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l 383 (416)
T PRK00011 326 ----------------------TGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELI 383 (416)
T ss_pred ----------------------CHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHH
Confidence 02346666767786532211 11123468986432 123578999999999
Q ss_pred HHHHH
Q 037144 496 QEHLE 500 (502)
Q Consensus 496 ~~~~~ 500 (502)
+++..
T Consensus 384 ~~~~~ 388 (416)
T PRK00011 384 ADVLD 388 (416)
T ss_pred HHHHh
Confidence 98754
No 94
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.86 E-value=1.7e-19 Score=184.35 Aligned_cols=295 Identities=12% Similarity=0.066 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
..+..++.+++++++|.+ ..+++++|+++++.++..... +++.|++++..|.+...++++
T Consensus 83 ~~~~~~l~~~la~~~~~~---------~~i~~~~g~~~~~~~l~~~~~-----------~gd~V~~~~~~~~~~~~~~~~ 142 (385)
T PRK05958 83 SPAHEALEEELAEWFGAE---------RALLFSSGYAANLAVLTALAG-----------KGDLIVSDKLNHASLIDGARL 142 (385)
T ss_pred cHHHHHHHHHHHHHhCCC---------cEEEECcHHHHHHHHHHHhCC-----------CCCEEEEeCccCHHHHHHHHh
Confidence 445566777888888843 357777888888765543321 677888999999999999999
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144 195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 274 (502)
Q Consensus 195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~ 274 (502)
.|. .++.+|. .|++++++++++.. ..+.+|++....+.+|.+.|+++|+++|++||+|+++|++|+.
T Consensus 143 ~g~---~~~~~~~-------~d~~~l~~~i~~~~---~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~ 209 (385)
T PRK05958 143 SRA---RVRRYPH-------NDVDALEALLAKWR---AGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGT 209 (385)
T ss_pred cCC---ceEEeCC-------CCHHHHHHHHHhcc---CCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccc
Confidence 998 8888874 37899999886531 1134666666788999999999999999999999999999965
Q ss_pred ccccCccch-hhhcCCC-CCC-eeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc
Q 037144 275 SACICPEFR-HFIDGVE-CVD-SFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ 351 (502)
Q Consensus 275 ~~~~~~~~~-~~~~~~~-~aD-si~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 351 (502)
+.+...... ....++. ..| .+..++||+++.+ | |+++. ++............|...
T Consensus 210 g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G-g~~~~-~~~~~~~~~~~~~~~~~~------------------ 268 (385)
T PRK05958 210 GVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSS-G-AAVLG-SETLIDYLINRARPFIFT------------------ 268 (385)
T ss_pred cccCCCCCchHHhhCCCCCCceEEEEechhhcccC-C-cEEEc-CHHHHHHHHHhCccceec------------------
Confidence 543211000 0011121 234 5678899999753 3 55543 443322111111112111
Q ss_pred ccCCC-CCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCC
Q 037144 352 ITLCR-RFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNG 430 (502)
Q Consensus 352 ~~~sr-~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 430 (502)
++. ......++.+++.+... .++.++..++++++.+.|++. ++++. ++..++++|.++.
T Consensus 269 --~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~-------------- 328 (385)
T PRK05958 269 --TALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRAL-GFQLM-DSQSAIQPLIVGD-------------- 328 (385)
T ss_pred --CCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC--------------
Confidence 111 11222344555544221 567788899999999999987 67765 4566777776532
Q ss_pred CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE---CCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV---GGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
.....++.+++.++|..+...... .+..++|+++. ..+++++++++++.|+++
T Consensus 329 --------------~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~-~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 329 --------------NERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLT-AAHTEADIDRLLEALAEA 384 (385)
T ss_pred --------------HHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEec-CCCCHHHHHHHHHHHHhc
Confidence 112346778888788754332111 23468999985 445677999999999775
No 95
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.86 E-value=8e-20 Score=187.73 Aligned_cols=309 Identities=10% Similarity=0.059 Sum_probs=193.5
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh-HH
Q 037144 111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-FQ 189 (502)
Q Consensus 111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~~ 189 (502)
.|...++|+.+.+.+++++|.+.. -++++||+.||+.++.+... +++.|+++...|.+ +.
T Consensus 69 ~~~~~~lE~~~~~~la~l~g~~~a--------lv~~~SG~~A~~~~l~al~~-----------~GD~Vl~~~~~~~~~~~ 129 (416)
T PRK13034 69 CEFVDEVEALAIERAKQLFGCDYA--------NVQPHSGSQANGAVYLALLK-----------PGDTILGMSLSHGGHLT 129 (416)
T ss_pred ChHHHHHHHHHHHHHHHHhCCCce--------EEecCCcHHHHHHHHHHhcC-----------CCCEEEEcCccceeeee
Confidence 466788888777899999998642 25578899999887766532 78899999999987 33
Q ss_pred HHHHHcCCCCCCE--EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144 190 KAAQIVGIDRKNI--RAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 190 ~aa~~~Glg~~~v--~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh 267 (502)
..++....+. .+ +.++++.. ++.+|+++|++.++.. .|.+|+.+. +.+|..-|+++|.++|++||++++
T Consensus 130 ~g~~~~~~~~-~~~~~~~~~~~~-~~~~d~~~le~~l~~~-----~~klVi~~~--~~~g~~~dl~~l~~la~~~g~~li 200 (416)
T PRK13034 130 HGAKVSLSGK-WYNAVQYGVDRL-TGLIDYDEVEELAKEH-----KPKLIIAGF--SAYPRELDFARFREIADEVGALLM 200 (416)
T ss_pred cCCcceeccc-eeeeEEcccccc-cCCcCHHHHHHHHhhc-----CCeEEEECC--CccccccCHHHHHHHHHHcCCEEE
Confidence 3333221110 22 34555432 4579999999988642 134555433 456888899999999999999999
Q ss_pred eecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCC
Q 037144 268 VDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGY 347 (502)
Q Consensus 268 VDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 347 (502)
||+||+.+.+..+.. ...+..+|.+++++|||+.+|.| |+++..++.... .... +++..
T Consensus 201 vD~Aha~G~~~~g~~---~~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~~-~~~~---~~~~~------------- 259 (416)
T PRK13034 201 VDMAHIAGLVAAGEH---PNPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIAK-KINS---AVFPG------------- 259 (416)
T ss_pred EeCcccccCcccCCC---CCCCCCceEEEEeCcccCCCCCC-eEEEECcHHHHH-HHHh---hcCCc-------------
Confidence 999998877654321 12234799999999999987765 555555443221 1111 11110
Q ss_pred CcccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhh
Q 037144 348 KDWQITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRT 425 (502)
Q Consensus 348 ~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~ 425 (502)
++.+... ...++..++...-..+..++.++..+++++|++.|++. |+++..+ .+.+++.+.+...+.
T Consensus 260 ----~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~~~~~~------ 328 (416)
T PRK13034 260 ----LQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDLRPKGL------ 328 (416)
T ss_pred ----ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEcCCCCC------
Confidence 0001011 11122222222211234466789999999999999988 8998743 456676666543211
Q ss_pred cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee------eECCEEEEEEEecC---CCCcHHHHHHHHHHHH
Q 037144 426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA------IVGGIYVLRFAAGN---SMTMESHVRAAWTVVQ 496 (502)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~------~~~g~~~lR~~~~~---~~t~~~di~~~~~~l~ 496 (502)
....+.++|.+.|....... .......||++++. ...+++||+++++.|.
T Consensus 329 ---------------------~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~ 387 (416)
T PRK13034 329 ---------------------SGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWIL 387 (416)
T ss_pred ---------------------CHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHH
Confidence 12344466666786432200 00113469999643 1345789999999998
Q ss_pred HHHH
Q 037144 497 EHLE 500 (502)
Q Consensus 497 ~~~~ 500 (502)
++..
T Consensus 388 ~~~~ 391 (416)
T PRK13034 388 DVLD 391 (416)
T ss_pred HHHh
Confidence 8754
No 96
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.86 E-value=2.1e-19 Score=184.69 Aligned_cols=296 Identities=12% Similarity=0.109 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G 196 (502)
...++.+.+++++|.+ ..+++++|++||..++..++.. .++.+|+++...|.++..++...|
T Consensus 91 ~~~~Le~~la~~~g~~---------~~l~~~sG~~an~~ai~~l~~~---------~~~~~v~~~~~~h~s~~~~~~~~g 152 (402)
T TIGR01821 91 PHVELEAELADLHGKE---------SALVFTSGYVANDATLATLAKI---------IPGCVIFSDELNHASMIEGIRHSG 152 (402)
T ss_pred HHHHHHHHHHHHhCCC---------eEEEECchHHHHHHHHHHhhCC---------CCCCEEEEcchHhHHHHHHHHHcC
Confidence 3445666688888854 3577788899998888776532 045677777778999988888888
Q ss_pred CCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccc
Q 037144 197 IDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 276 (502)
Q Consensus 197 lg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~ 276 (502)
. .++.++. .|+++|++.++... ...+.+|+++.+.+++|.+.|+++|.++|++||++++||+||+.+.
T Consensus 153 ~---~~~~~~~-------~d~~~l~~~l~~~~--~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~ 220 (402)
T TIGR01821 153 A---EKFIFRH-------NDVAHLEKLLQSVD--PNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGL 220 (402)
T ss_pred C---eEEEECC-------CCHHHHHHHHHhcc--CCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccc
Confidence 8 7766653 37888998886431 1235688889999999999999999999999999999999998443
Q ss_pred ccCccchhh--hcCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhc-CCcccccCccCCCCCcccccCCCcccc
Q 037144 277 CICPEFRHF--IDGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLS-TNPQYLKNEATDQEPKEQEVGYKDWQI 352 (502)
Q Consensus 277 ~~~~~~~~~--~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~~ 352 (502)
+ .+..... ..++ ...|.++.++.|.++.+. |+++. ++... +.+. ....|.+.
T Consensus 221 ~-g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G--G~i~~-~~~~~-~~l~~~~~~~~~t------------------- 276 (402)
T TIGR01821 221 Y-GPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG--GYIAA-SRKLI-DAIRSYAPGFIFT------------------- 276 (402)
T ss_pred c-CCCCCccchhccCCCCCeEEEEechhhhccCC--ceeec-CHHHH-HHHHHhCcCceec-------------------
Confidence 2 1211111 1122 346888889999997653 45443 33332 2221 11122211
Q ss_pred cCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCC
Q 037144 353 TLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGT 431 (502)
Q Consensus 353 ~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~ 431 (502)
.+.. ..+.++.++++.+... ..+.++..++++++.+.|+++ |++++ ++..+++.+.+..
T Consensus 277 -~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~i~~i~~~~--------------- 336 (402)
T TIGR01821 277 -TSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEAL-GIPVI-PNPSHIVPVIIGD--------------- 336 (402)
T ss_pred -CcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC---------------
Confidence 1111 1122333445443222 445566678999999999887 77765 4456676665421
Q ss_pred cccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeee----ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 432 YDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAI----VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~----~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.....++.++|.++ |. ++.+.. ..+..++|++++.. .+++||++++++|+++.++
T Consensus 337 -------------~~~a~~~~~~L~~~~Gi-~v~~~~~p~~~~g~~~lRis~~~~-~t~edi~~~~~~l~~~~~~ 396 (402)
T TIGR01821 337 -------------AALCKKVSDLLLNKHGI-YVQPINYPTVPRGTERLRITPTPA-HTDKMIDDLVEALLLVWDR 396 (402)
T ss_pred -------------HHHHHHHHHHHHhcCCE-EEEeECCCCCCCCCceEEEEeCCC-CCHHHHHHHHHHHHHHHHH
Confidence 11235677777655 65 444321 23456899998654 5566999999999998765
No 97
>PLN02231 alanine transaminase
Probab=99.86 E-value=8e-19 Score=184.72 Aligned_cols=331 Identities=12% Similarity=0.107 Sum_probs=217.0
Q ss_pred CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC
Q 037144 105 GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT 184 (502)
Q Consensus 105 ~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 184 (502)
...|..+.+..++.+.+++|+.+..|.+... ...++|+|+++++..++.+.... +++.|++..+.
T Consensus 161 ~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~p-----e~I~iT~Ga~~ai~~~~~~l~~~----------~gd~Vli~~P~ 225 (534)
T PLN02231 161 TGAYSHSQGIKGLRDAIAAGIEARDGFPADP-----NDIFLTDGASPAVHMMMQLLIRS----------EKDGILCPIPQ 225 (534)
T ss_pred ccCcCCCCCcHHHHHHHHHHHHhccCCCCCc-----ccEEEeCCHHHHHHHHHHHhccC----------CCCEEEEeCCC
Confidence 4568888889999999999999988875332 26899999999987777665431 56788899999
Q ss_pred chhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---CChhHHHHHHHH
Q 037144 185 HCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---DPLKPLCDVAKQ 261 (502)
Q Consensus 185 H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---dpl~eI~~i~~~ 261 (502)
|..+..+++..|. +++.++++++++|.+|+++|++++++...++..+.+|+++.++|+||.+ +.+++|+++|++
T Consensus 226 Y~~y~~~~~~~g~---~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~ 302 (534)
T PLN02231 226 YPLYSASIALHGG---TLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQ 302 (534)
T ss_pred ChhHHHHHHHcCC---EEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 9999999999999 9999999865568999999999998765555456677888999999998 467889999999
Q ss_pred hCCEEEeecccccccccC-cc---chhhhc--CC--CCCCeeEE-ccCCcCC--CCCcceEEEee--CchhhhhhhcCCc
Q 037144 262 FGIWVHVDAAYAGSACIC-PE---FRHFID--GV--ECVDSFSF-NPHKWLF--TTLDCCCLWVK--DPSCLLSTLSTNP 328 (502)
Q Consensus 262 ~g~~lhVDaA~g~~~~~~-~~---~~~~~~--~~--~~aDsi~~-~~hK~l~--~p~~~g~~~~r--~~~~l~~~~~~~~ 328 (502)
||+|+++|.+|....+.. .. ...... +. .....+++ ++.|.++ ....+|++.+. ++.... .+....
T Consensus 303 ~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~-~l~k~~ 381 (534)
T PLN02231 303 EGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVRE-QIYKVA 381 (534)
T ss_pred cCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHH-HHHHHH
Confidence 999999999997765421 11 111111 11 11224554 6999653 56778888763 333322 221110
Q ss_pred ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-----cHHHH-------HHHHHHHHHHHHHHHHHHhcC
Q 037144 329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-----GVANL-------RNFIRSHVGMAKLFERLVTSD 396 (502)
Q Consensus 329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g~~g~-------~~~~~~~~~la~~l~~~l~~~ 396 (502)
. ... ++ ..+...++...+ |...+ .++.+.+.++++.+.+.|+++
T Consensus 382 ~-~~~--------------------~s---~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~ 437 (534)
T PLN02231 382 S-VNL--------------------CS---NISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSL 437 (534)
T ss_pred h-hhc--------------------CC---ChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0 000 11 111222222222 11222 234667888899999999999
Q ss_pred CCeEEecCCCeeEEEE-Eee-cCc-chhhhhhcccCCCcccccccchhHhhH-HHHHHHHHHHH-hcCcEEEEeeeEC--
Q 037144 397 KRFEVAFPRNFSLVCF-RVT-PSA-VMDKLRTKYKNGTYDQYRQFSEEERTN-EFNRELLESIN-VSGKVFMTHAIVG-- 469 (502)
Q Consensus 397 ~~~~l~~~~~~~~v~f-~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~-~~g~~~~~~~~~~-- 469 (502)
+++++. +|+.+++.| ++. |.. .. ..+..+ .....++.++. +.|.+++++..+.
T Consensus 438 ~gi~~~-~p~Ggfylw~~l~lp~~~~~-------------------~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~ 497 (534)
T PLN02231 438 EGVTCN-KAEGAMYLFPRIHLPQKAIK-------------------AAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQV 497 (534)
T ss_pred CCceec-CCCeeeEEeccccCcHHHHH-------------------HHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCC
Confidence 898875 677788877 221 110 00 000000 00123445454 4587776666554
Q ss_pred -CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 470 -GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 470 -g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+..++|+++. +++++++..++.|.+..++
T Consensus 498 ~g~~~~Rit~~---~~~e~l~eal~RL~~~~~~ 527 (534)
T PLN02231 498 PGTWHFRCTIL---PQEDKIPAIVSRLTEFHKS 527 (534)
T ss_pred CCCCeEEEEeC---CCHHHHHHHHHHHHHHHHH
Confidence 3457999985 5777898888888877654
No 98
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.86 E-value=1e-19 Score=188.64 Aligned_cols=320 Identities=12% Similarity=0.073 Sum_probs=198.6
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC------
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD------ 182 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~------ 182 (502)
......++|..+.+...++|+...... ...+ +.+|+.||+.++.+... +++.|++.+
T Consensus 74 G~~~~d~lE~~~~~~~~~~f~~~~~~~-----~~nv~~~SG~~AN~av~~aL~~-----------pgD~Il~~d~~~gGh 137 (475)
T PLN03226 74 GNEYIDQIETLCQKRALEAFRLDPEKW-----GVNVQPLSGSPANFAVYTALLQ-----------PHDRIMGLDLPHGGH 137 (475)
T ss_pred CChhHHHHHHHHHHHHHHHhCCCccee-----EEecCcCchHHHHHHHHHHhCC-----------CCCEEEECCCCcCcc
Confidence 334668899989999999999876420 1112 37889999877766643 677888733
Q ss_pred CCchhHHHHHHHcCCCCCCEE----EEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHH
Q 037144 183 QTHCAFQKAAQIVGIDRKNIR----AIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDV 258 (502)
Q Consensus 183 ~~H~s~~~aa~~~Glg~~~v~----~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i 258 (502)
..|.+....+++.+. .+. .++++. +++.+|+++|++++.+.. |.+|++ +.+.+|..-|+++|.++
T Consensus 138 l~H~~~~~g~~~s~~---~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~~-----pklIv~--~~S~~s~~~D~a~i~~i 206 (475)
T PLN03226 138 LSHGYQTDGKKISAT---SIYFESMPYRLDE-STGLIDYDKLEKKAMLFR-----PKLIIA--GASAYPRDWDYARMRKI 206 (475)
T ss_pred hhhhhhhcccccccc---eEEEEeeeeeecC-CCCCcCHHHHHHHHhhcC-----CeEEEE--ecCcCCCccCHHHHHHH
Confidence 334444433333333 222 344454 357999999999986432 445544 24568888999999999
Q ss_pred HHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCc---ccccCcc
Q 037144 259 AKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNP---QYLKNEA 335 (502)
Q Consensus 259 ~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~---~yl~~~~ 335 (502)
|+++|++++||+||+.+.+..+..... ++.+|++++++||||.+|.| |++++++.. ......... .|..
T Consensus 207 a~~~ga~LlvD~AH~~Gli~~~~~~~p---~~~~Div~~t~hK~L~GP~G-g~I~~~~~~-~~~~~~g~~~~~d~~~--- 278 (475)
T PLN03226 207 ADKVGALLMCDMAHISGLVAAQEAASP---FEYCDVVTTTTHKSLRGPRG-GMIFFRKGP-KPPKGQGEGAVYDYED--- 278 (475)
T ss_pred HHHcCCEEEEEchhhhCcccCCCCCCC---CCCCeEEEecCcccccCCCc-eEEEEchhh-cccccCCCccHHHHHH---
Confidence 999999999999999988765432221 23799999999999998987 777776532 110000000 0100
Q ss_pred CCCCCcccccCC-CcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEE
Q 037144 336 TDQEPKEQEVGY-KDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCF 412 (502)
Q Consensus 336 ~~~~~~~~~~~~-~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f 412 (502)
..+. ....++++-. ....++..+++.+-..+++++.++..+++++|++.|.+. |++++.. ....++.+
T Consensus 279 --------~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~-G~~l~~~~t~~hi~lv 349 (475)
T PLN03226 279 --------KINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK-GYKLVTGGTDNHLVLW 349 (475)
T ss_pred --------HhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCCCCEEEE
Confidence 0000 0011222211 123456677777666678888999999999999999985 9999863 23456666
Q ss_pred EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee---e--ECCEEEEEEEe---cCCCCc
Q 037144 413 RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA---I--VGGIYVLRFAA---GNSMTM 484 (502)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~--~~g~~~lR~~~---~~~~t~ 484 (502)
.+.+.++. ..++.+.|.+.|+..-... . .-....+|+.. +...-+
T Consensus 350 ~~~~~gi~---------------------------~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~ 402 (475)
T PLN03226 350 DLRPLGLT---------------------------GSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLV 402 (475)
T ss_pred EccCCCCC---------------------------HHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCC
Confidence 65443221 1233444444565422111 0 01123577621 345567
Q ss_pred HHHHHHHHHHHHHHHH
Q 037144 485 ESHVRAAWTVVQEHLE 500 (502)
Q Consensus 485 ~~di~~~~~~l~~~~~ 500 (502)
++|++++.+.|.++++
T Consensus 403 ~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 403 EKDFEKVAEFLHRAVT 418 (475)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7899999999988765
No 99
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.86 E-value=3.4e-19 Score=182.29 Aligned_cols=333 Identities=12% Similarity=0.078 Sum_probs=212.7
Q ss_pred HHHHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144 89 VAGIVGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK 167 (502)
Q Consensus 89 ~~~~~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~ 167 (502)
+|..+.+.+...++ .....|....+..++.+.+++++++.+|.+... ....++|+|+++++..++.+..+
T Consensus 41 ~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~----~~~i~~t~G~~~~l~~~~~~~~~----- 111 (389)
T PRK05957 41 PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNN----EQAIVVTAGSNMAFMNAILAITD----- 111 (389)
T ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCeEEEeCChHHHHHHHHHHhcC-----
Confidence 34445666655543 223456666677889999999999999974210 01578899998888666655432
Q ss_pred hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
+++.|+++.+.|......++..|+ +++.+|.+. ++.+|+++|++++++++ .+|+++.++|+||
T Consensus 112 ------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~------klv~~~~p~NPtG 174 (389)
T PRK05957 112 ------PGDEIILNTPYYFNHEMAITMAGC---QPILVPTDD--NYQLQPEAIEQAITPKT------RAIVTISPNNPTG 174 (389)
T ss_pred ------CCCEEEEeCCCCcCHHHHHHhcCC---EEEEeecCC--CCCcCHHHHHHhcCcCc------eEEEEeCCCCCCC
Confidence 677888888888877777788899 999999863 56899999999986543 3778888999999
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhc--CCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhh
Q 037144 248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID--GVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLL 321 (502)
Q Consensus 248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~--~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~ 321 (502)
.+-| +++|+++|++||+++++|.+|+.............. ....-..++.++.|.++.| ..+|+++..+ ...
T Consensus 175 ~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~-~~~- 252 (389)
T PRK05957 175 VVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPI-HLL- 252 (389)
T ss_pred cCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCH-HHH-
Confidence 9977 889999999999999999999765432111111111 1111124456689998644 4588887643 222
Q ss_pred hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 037144 322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRF 399 (502)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~ 399 (502)
+.+.....+.... ...+....+...+ +.+.+++..++..++++++.+.|++++++
T Consensus 253 ~~~~~~~~~~~~~-----------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 309 (389)
T PRK05957 253 EAIKKIQDTILIC-----------------------PPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDR 309 (389)
T ss_pred HHHHHHHhhcccC-----------------------CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 2221111111000 0122333333333 34556777788888999999999988775
Q ss_pred EEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEEEEE
Q 037144 400 EVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYVLRF 476 (502)
Q Consensus 400 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~ 476 (502)
..+.++..++++|...+.+. + ..++.+++.+ .|..+.++..+. +..++|+
T Consensus 310 ~~~~~~~gg~~~~~~~~~~~-------------------------~--~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi 362 (389)
T PRK05957 310 CTLHPANGAFYCFLKVNTDL-------------------------N--DFELVKQLIREYRVAVIPGTTFGMKNGCYLRI 362 (389)
T ss_pred ccccCCCeeEEEEEeCCCCC-------------------------C--hHHHHHHHHHHCCEEEccchhhCCCCCCEEEE
Confidence 23345665665543323211 1 2456667654 576554443332 2458999
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 477 AAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 477 ~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+++.. +++++++.++.|.+..++
T Consensus 363 s~~~~--~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 363 AYGAL--QKATAKEGIERLVQGLKT 385 (389)
T ss_pred EEecC--CHHHHHHHHHHHHHHHHh
Confidence 99643 455777777777776553
No 100
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.86 E-value=1.4e-18 Score=178.83 Aligned_cols=344 Identities=10% Similarity=0.030 Sum_probs=217.6
Q ss_pred CHHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144 88 SVAGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK 166 (502)
Q Consensus 88 ~~~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~ 166 (502)
.+|..+.+.+...++.. ...|....+..++.+.+.+|+.+.+|.+-.. ...++|+|+++++..++.+..+
T Consensus 49 ~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~I~it~G~~~al~~~~~~l~~---- 119 (409)
T PLN00143 49 RTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSP-----DDVYLTLGCKHAAEIIIKVLAR---- 119 (409)
T ss_pred CCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCH-----hhEEEecChHHHHHHHHHHHcC----
Confidence 44555666666655543 3457666677889999999999887764221 2688999999988777665543
Q ss_pred HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144 167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246 (502)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~ 246 (502)
+++.|+++.+++..+...++..|+ +++.+++++++++.+|+++|++++++.+ ..++++.++|+|
T Consensus 120 -------~gd~v~v~~P~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~~~~~nP~NPT 183 (409)
T PLN00143 120 -------PEANILLPRPGFPDVETYAIFHHL---EIRHFDLLPEKGWEVDLDAVEAIADENT------IAMVIINPGNPC 183 (409)
T ss_pred -------CCCEEEEcCCCCcCHHHHHHHcCC---EEEEEeccCCCCCcCCHHHHHHhcccCC------EEEEEECCCCCC
Confidence 677888999999999999999999 9999998644457899999998875433 367777899999
Q ss_pred cccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCC-C-eeEEccCCcCC-CCCcceEEEeeCchhh
Q 037144 247 TAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECV-D-SFSFNPHKWLF-TTLDCCCLWVKDPSCL 320 (502)
Q Consensus 247 G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~a-D-si~~~~hK~l~-~p~~~g~~~~r~~~~l 320 (502)
|.+-+ +++|+++|++|++++++|.+|............ +..+... . .++.++.|.++ ....+|+++..++..+
T Consensus 184 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~-~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~ 262 (409)
T PLN00143 184 GSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVP-MGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGL 262 (409)
T ss_pred CCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcc-hhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhh
Confidence 99966 778888999999999999999765542111110 1111111 2 35566999954 5577888887544221
Q ss_pred hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144 321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSDK 397 (502)
Q Consensus 321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~ 397 (502)
.+.......+..... . ..++ ..+...++...+ +.+.+++.+++..+..+++.+.|++++
T Consensus 263 ~~~~~~~~~~~~~~~-----------~----~~~~---~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 324 (409)
T PLN00143 263 LQICEIADSIKKALN-----------P----APFP---PTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIP 324 (409)
T ss_pred hhhHHHHHHHHHHHh-----------c----cCCC---CchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 111000000000000 0 0000 122223333333 245678888888888888999998876
Q ss_pred CeEEecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHH-HHhcCcEEEEeeeECCEEEEE
Q 037144 398 RFEVAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLES-INVSGKVFMTHAIVGGIYVLR 475 (502)
Q Consensus 398 ~~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~g~~~~~~~~~~g~~~lR 475 (502)
+.....+|+.+++.| +++..... ... ...++..+ +.+.|..+.++..++...++|
T Consensus 325 ~~~~~~~p~gg~f~w~~l~~~~~~-------------------~~~----~~~~~~~~ll~~~gV~v~pg~~f~~~~~iR 381 (409)
T PLN00143 325 CIMCPQKAEGAFFALVKLNLLLLE-------------------DIE----DDMEFCLKLAKEESLIILPGVTVGLKNWLR 381 (409)
T ss_pred CCCCCCCCCeeEEEEEecchhhcC-------------------CCC----CHHHHHHHHHHhCCEEEeCccccCCCCeEE
Confidence 544334455554444 44321000 000 01233333 355677666655565567999
Q ss_pred EEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 476 FAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 476 ~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
++++ ++++++++.++.|.++.++
T Consensus 382 i~~~---~~~~~l~~al~rl~~~l~~ 404 (409)
T PLN00143 382 ITFA---VEQSSLEDGLGRLKSFCGR 404 (409)
T ss_pred EEEc---CCHHHHHHHHHHHHHHHHH
Confidence 9997 3577999999999887654
No 101
>PRK08363 alanine aminotransferase; Validated
Probab=99.86 E-value=3.1e-19 Score=183.23 Aligned_cols=333 Identities=10% Similarity=0.051 Sum_probs=214.1
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+......|...++..++++.+.+|+...+|..-+. ...++|+|+++++..++.+..+
T Consensus 48 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~it~G~~~al~~~~~~~~~------- 115 (398)
T PRK08363 48 PEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITP-----DDVRVTAAVTEALQLIFGALLD------- 115 (398)
T ss_pred CHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCh-----hhEEEeCCHHHHHHHHHHHhCC-------
Confidence 4445555555543323346566778899999999998887753221 2689999999998777665533
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEE-ecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAI-KTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v-~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|+++..+|..+...++..|. .++.+ +.++ +++.+|++.|++++.+.+ .+|+++.++|+||.
T Consensus 116 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~v~~~~~~~-~~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~ 181 (398)
T PRK08363 116 ----PGDEILIPGPSYPPYTGLVKFYGG---VPVEYRTIEE-EGWQPDIDDIRKKITEKT------KAIAVINPNNPTGA 181 (398)
T ss_pred ----CCCEEEEcCCCCcchHHHHHHcCC---EEEEeccccc-cCCcCCHHHHHhhCCcce------EEEEEECCCCCCCc
Confidence 678899999999999999999998 88888 4543 346899999999886533 36778899999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCC-Cee-EEccCCcC-CCCCcceEEEee-Cchhhh
Q 037144 249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECV-DSF-SFNPHKWL-FTTLDCCCLWVK-DPSCLL 321 (502)
Q Consensus 249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~a-Dsi-~~~~hK~l-~~p~~~g~~~~r-~~~~l~ 321 (502)
+-+ +++|.++|+++|+++++|++|+...+.. .... +..+... ..+ ..+++|++ ..+..+|++++. ++..+.
T Consensus 182 ~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~-~~~~-~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~ 259 (398)
T PRK08363 182 LYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEG-KHVS-PGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLA 259 (398)
T ss_pred CcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCC-cccC-HHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHH
Confidence 866 8899999999999999999997654321 1111 1111122 234 45799995 466778988873 332221
Q ss_pred hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 037144 322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRF 399 (502)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~ 399 (502)
........+... .. ....+...++...+ ..+.+++..++..++++++.+.|++++++
T Consensus 260 ~l~~~~~~~~~~-----------------~~----~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~ 318 (398)
T PRK08363 260 EVREAIDKLARI-----------------RL----CPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGI 318 (398)
T ss_pred HHHHHHHHHhcc-----------------cc----cCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 111000000000 00 00122222222222 35667778888889999999999988888
Q ss_pred EEecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHH-HHHHHhcCcEEEEeeeEC--CEEEEE
Q 037144 400 EVAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNREL-LESINVSGKVFMTHAIVG--GIYVLR 475 (502)
Q Consensus 400 ~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~~g~~~~~~~~~~--g~~~lR 475 (502)
++. +|..+++.| ++++... . . ..++ .+.+.++|..+.++..+. +..++|
T Consensus 319 ~~~-~p~g~~~~~~~l~~~~~----------------------~--~--~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iR 371 (398)
T PRK08363 319 STT-KPQGAFYIFPRIEEGPW----------------------K--D--DKEFVLDVLHEAHVLFVHGSGFGEYGAGHFR 371 (398)
T ss_pred Eec-CCCeEEEEEEEeccCCC----------------------C--C--HHHHHHHHHHhCCEEEeCchhhCCCCCCeEE
Confidence 764 566777766 3432100 0 0 1233 334456676655554443 346999
Q ss_pred EEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 476 FAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 476 ~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
++++. ++++++++++.|+++.++
T Consensus 372 is~~~---~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 372 LVFLP---PVEILEEAMDRFEEFMRE 394 (398)
T ss_pred EEecC---CHHHHHHHHHHHHHHHHH
Confidence 99862 567899999999887654
No 102
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.86 E-value=4.6e-19 Score=182.03 Aligned_cols=337 Identities=12% Similarity=0.007 Sum_probs=216.6
Q ss_pred HHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCC-CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 91 GIVGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLP-KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 91 ~~~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
..+.+.+...+. .....|.. .+..++.+.+.+|+.+.+|.+ -+. ....++|+|+++++..++.+..+
T Consensus 60 ~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~----~~~I~it~Gs~~al~~~~~~~~~------ 128 (410)
T PRK06290 60 ESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDP----VTEVIHSIGSKPALAMLPSCFIN------ 128 (410)
T ss_pred HHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCC----cceEEEccCHHHHHHHHHHHhCC------
Confidence 334444443332 22233543 567889999999999888864 211 01488999988887666554432
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|++..+.+..+...++..|. +++.+|++.++++.+|+++|++++.+. +.+|+++.++|+||.
T Consensus 129 -----~gd~Vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NPTG~ 194 (410)
T PRK06290 129 -----PGDVTLMTVPGYPVTGTHTKYYGG---EVYNLPLLEENNFLPDLDSIPKDIKEK------AKLLYLNYPNNPTGA 194 (410)
T ss_pred -----CCCEEEEeCCCCccHHHHHHHcCC---EEEEEecCCCcCCcCCHHHHHHhhccc------ceEEEEECCCCCCCc
Confidence 677888888899888899999999 999999986556888999999888643 347888889999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhh
Q 037144 249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLS 322 (502)
Q Consensus 249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~ 322 (502)
+-+ +++|.++|++||+||++|.+|+...... ..... +.+....+.+..++.|.++.| ..+|+++. ++..+.
T Consensus 195 v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~-~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~-~~~l~~- 271 (410)
T PRK06290 195 VATKEFYEEVVDFAKENNIIVVQDAAYAALTFDG-KPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVG-NELIVK- 271 (410)
T ss_pred CCCHHHHHHHHHHHHHcCeEEEEecchhhceeCC-CCcChhcCCCccccEEEEeechhhcCCchhheEeEEe-CHHHHH-
Confidence 966 6788888999999999999998654321 11111 111223457778899999644 55677664 443322
Q ss_pred hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
.+.....+... ....+...++...+. .+.+++..+++.++++++.+.|++. ++.+
T Consensus 272 ~l~~~~~~~~~-----------------------~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 327 (410)
T PRK06290 272 AFATVKDNNDS-----------------------GQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-GFKA 327 (410)
T ss_pred HHHHHHhcccc-----------------------CCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-CCee
Confidence 22111111100 001122222333331 2345667778888899999999987 7776
Q ss_pred ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCC
Q 037144 402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNS 481 (502)
Q Consensus 402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~ 481 (502)
. +|+.+++.|...+.... .... .....++.++|.++|.+++.+.... ..++|++++.+
T Consensus 328 ~-~p~g~f~l~v~lp~~~~-------------------~~~~-~~~~~~~~~~Ll~~~~v~~~p~~~~-~~~lRi~~~~~ 385 (410)
T PRK06290 328 E-MPGGTFYLYVKAPKGTK-------------------SGIK-FENAEEFSQYLIKEKLISTVPWDDA-GHFLRFSVTFE 385 (410)
T ss_pred c-CCCeeeEEEEECCCccc-------------------cCCC-CCCHHHHHHHHHHhCCEEEECCccc-cCeEEEEEEcc
Confidence 5 56667666533332100 0000 0013467788888787655443211 25899999877
Q ss_pred CCcHHHHHHHHHHHHHHHHh
Q 037144 482 MTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 482 ~t~~~di~~~~~~l~~~~~~ 501 (502)
..++++.++++++|.+.+.+
T Consensus 386 ~~~~~~~~~~~~~l~~~~~~ 405 (410)
T PRK06290 386 AKDEEEEDRILEEIKRRLSD 405 (410)
T ss_pred cccccchhHHHHHHHHHHhh
Confidence 77888999999999887653
No 103
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.86 E-value=4.5e-20 Score=184.92 Aligned_cols=309 Identities=10% Similarity=0.023 Sum_probs=200.0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEc-CCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQ-GTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF 188 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t-~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (502)
-++.+.++-+++.+.++++||.+.+. ..+++ +|||+|+-.++...... +.+.+++..+..+|. +
T Consensus 31 r~~~f~~~~~~~~~~l~~l~~~~~~~------~v~~~~gsgT~a~ea~~~nl~~~--------~~~~l~i~~G~fg~r-~ 95 (349)
T TIGR01364 31 RSKEFEAVANEAESDLRELLNIPDNY------EVLFLQGGATGQFAAVPLNLLAE--------GKVADYIVTGAWSKK-A 95 (349)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHHHHHHHHhcCCC--------CCeEEEEECCHHHHH-H
Confidence 34566688889999999999986542 46665 45998886665543221 113344444544443 4
Q ss_pred HHHHHHcCCCCCCEEEEecCCCC--CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144 189 QKAAQIVGIDRKNIRAIKTTKSS--SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV 266 (502)
Q Consensus 189 ~~aa~~~Glg~~~v~~v~~~~~~--~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l 266 (502)
.+.|+.+|+ +..+..++.. .-.+|+++++. ++ .+.+|.+++..|+||...| ++++.+++.+
T Consensus 96 ~~~a~~~g~----~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~v~~th~ETstGv~~~-----~l~~~~~~l~ 158 (349)
T TIGR01364 96 AKEAKKYGV----VNVVASGKEGNYTKIPDPSTWEI--SE------DAAYVHYCANETIHGVEFR-----ELPDVKNAPL 158 (349)
T ss_pred HHHHHHhCC----cEEEeccccCCCCCCCCHHhcCC--CC------CCCEEEEcCCCCcccEecc-----eecccCCCeE
Confidence 667777786 3444432110 11456665552 11 2458999999999999876 6677789999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144 267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG 346 (502)
Q Consensus 267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (502)
+||++++.+..+.+-. ..|++++++||+++ |.|.|+++++++..- ..-...+.|..... ...
T Consensus 159 iVDavss~g~~~id~~--------~~d~~~~ssqK~lg-P~Glg~l~~s~~~~~-~~~~~~~~~~~~~~--------~~~ 220 (349)
T TIGR01364 159 VADMSSNILSRPIDVS--------KFGLIYAGAQKNIG-PAGLTVVIVRKDLLG-RASRITPSMLNYKI--------HAE 220 (349)
T ss_pred EEEccccccCccCCHH--------HccEEEEecccccC-CCceEEEEECHHHHh-hcccCCCCcchHHH--------HHh
Confidence 9999998888776532 45699999999986 889999999876442 11111112211000 000
Q ss_pred CCcccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-C--Ce-eEEEEEeecCcch
Q 037144 347 YKDWQITLCRR-FRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-R--NF-SLVCFRVTPSAVM 420 (502)
Q Consensus 347 ~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~--~~-~~v~f~~~~~~~~ 420 (502)
.. ...++-. ....++..+++.+-.+ |++++.+++.++++++++.|++++|+..... + .+ .+++|.+++.
T Consensus 221 -~~-~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~--- 295 (349)
T TIGR01364 221 -ND-SMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE--- 295 (349)
T ss_pred -cC-CCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh---
Confidence 00 0001111 1235777888888778 7999999999999999999999988766532 1 34 4577776431
Q ss_pred hhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
.+..++++.+.++|. ++..... ..+.+|+|+.++ ++++|||+++++|+++.+
T Consensus 296 -------------------------~~~~~~~~~~~~~Gi-~~~~~~~-~~g~vRvS~~~~-nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 296 -------------------------ELEKRFLKEAEERGL-VSLKGHR-SVGGMRASIYNA-MPLEGVQALVDFMKEFQK 347 (349)
T ss_pred -------------------------hHhHHHHHHHHHCCC-cccCCcc-ccCeeEEECcCC-CCHHHHHHHHHHHHHHHH
Confidence 112456667777897 4433321 235899999655 667799999999999876
Q ss_pred h
Q 037144 501 A 501 (502)
Q Consensus 501 ~ 501 (502)
+
T Consensus 348 ~ 348 (349)
T TIGR01364 348 K 348 (349)
T ss_pred h
Confidence 4
No 104
>PRK08960 hypothetical protein; Provisional
Probab=99.86 E-value=1.8e-19 Score=184.39 Aligned_cols=328 Identities=13% Similarity=0.035 Sum_probs=210.5
Q ss_pred HHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 89 VAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 89 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
+|..+.+.+...+......|....+..++++.+.+|+.+.+|.+... ...++|+|+++++..++.+...
T Consensus 46 ~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~it~G~~~al~~~~~~~~~------ 114 (387)
T PRK08960 46 TAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDP-----ERILVTPGGSGALLLASSLLVD------ 114 (387)
T ss_pred CCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCCh-----hhEEEccCcHHHHHHHHHHhcC------
Confidence 35556666666664443457666778889999999999887764221 2689999999998776654432
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|+++.++|.+....++..|. +++.+|++.++++.+|+++|++++++.+ .+|+++.++|+||.
T Consensus 115 -----~gd~vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~p~NPtG~ 180 (387)
T PRK08960 115 -----PGKHWLLADPGYPCNRHFLRLVEG---AAQLVPVGPDSRYQLTPALVERHWNADT------VGALVASPANPTGT 180 (387)
T ss_pred -----CCCEEEEcCCCCcchHHHHHhcCC---eEEEEecCcccCCCCCHHHHHHHhCccc------eEEEEECCCCCCCc
Confidence 678899999999999999999999 9999999765567899999999886543 36777889999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCC-eeEEccCCcCC-CCCcceEEEeeCchhhhhh
Q 037144 249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVD-SFSFNPHKWLF-TTLDCCCLWVKDPSCLLST 323 (502)
Q Consensus 249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aD-si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~ 323 (502)
+-+ +++|+++|++||+|+++|.+|...... +..... ..+. .+ .+..+++|.++ ....+|+++..+ ..+. .
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~-~~~~~~-~~~~-~~vi~~~S~SK~~g~~GlRiG~~~~~~-~~~~-~ 255 (387)
T PRK08960 181 LLSRDELAALSQALRARGGHLVVDEIYHGLTYG-VDAASV-LEVD-DDAFVLNSFSKYFGMTGWRLGWLVAPP-AAVP-E 255 (387)
T ss_pred CcCHHHHHHHHHHHHHcCCEEEEEccccccccC-CCCCCh-hhcc-CCEEEEeecccccCCcccEEEEEEcCH-HHHH-H
Confidence 866 556777899999999999999765332 111111 1121 23 44567999986 445588887643 3222 2
Q ss_pred hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144 324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSDKRFE 400 (502)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~~~~ 400 (502)
+.....+.. . + ...+...++...+ ....+.+..+.+.+.++.+.+.|++. ++.
T Consensus 256 ~~~~~~~~~-------------------~-~---~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~ 311 (387)
T PRK08960 256 LEKLAQNLY-------------------I-S---ASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-GFG 311 (387)
T ss_pred HHHHHhhhc-------------------c-C---CCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCc
Confidence 211100000 0 0 0122222222222 13456666777788888899999887 666
Q ss_pred EecCCCeeEEEEEeecC-cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC---CEEEEE
Q 037144 401 VAFPRNFSLVCFRVTPS-AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG---GIYVLR 475 (502)
Q Consensus 401 l~~~~~~~~v~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~---g~~~lR 475 (502)
+...|..+++.|.-.+. .. + ..++.+++.+ .|..+.++..+. +..++|
T Consensus 312 ~~~~p~g~~f~~~~~~~~~~-------------------------~--~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iR 364 (387)
T PRK08960 312 IAVEPQGAFYLYADISAFGG-------------------------D--AFAFCRHFLETEHVAFTPGLDFGRHQAGQHVR 364 (387)
T ss_pred CCcCCCeeEEEEEeccccCC-------------------------C--HHHHHHHHHHhCCEEEcCchHhCCCCCCCeEE
Confidence 53345445544432221 10 1 2355666554 576554443332 235899
Q ss_pred EEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 476 FAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 476 ~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
++++. +.+.+..+++.|.++.+
T Consensus 365 i~~~~---~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 365 FAYTQ---SLPRLQEAVERIARGLR 386 (387)
T ss_pred EEecC---CHHHHHHHHHHHHHHHh
Confidence 99974 45678888887776553
No 105
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.86 E-value=2.8e-20 Score=171.23 Aligned_cols=302 Identities=16% Similarity=0.199 Sum_probs=203.1
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144 106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH 185 (502)
Q Consensus 106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (502)
..|...|-+..+|+++ ++++|-+ .|+|+++||++|+.++++.++. ++-.|++.+.+|
T Consensus 50 dVyGeD~tt~rLE~~v----A~l~GKE---------AgLFv~SGTmgNllaIm~Hc~~----------rg~eii~gd~~H 106 (384)
T KOG1368|consen 50 DVYGEDPTTNRLEQRV----AELFGKE---------AGLFVPSGTMGNLLAIMVHCHQ----------RGSEIIVGDRAH 106 (384)
T ss_pred ccccCCccHHHHHHHH----HHHhCcc---------ceeeecccccccHHHHHHHhcC----------CCceEEeccchh
Confidence 4577888899999885 5677654 4799999999999999999875 788999999999
Q ss_pred hhHHHHH---HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH-h-cCCccEEEEEecCCcccc-ccCChh---HHH
Q 037144 186 CAFQKAA---QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV-E-AELIPLFLCATVGTTAIT-AVDPLK---PLC 256 (502)
Q Consensus 186 ~s~~~aa---~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~-~-~g~~p~~Vv~t~gtt~~G-~idpl~---eI~ 256 (502)
.-.+++. .+.|+ .++.|.... ++.||++++|++|.... . ......+|++..-.+.+| .+-||+ +|.
T Consensus 107 I~~~E~gg~s~l~gv---~~~tv~~e~--dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~ 181 (384)
T KOG1368|consen 107 IHRYEQGGISQLAGV---HVRTVKNEN--DGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVK 181 (384)
T ss_pred eeehhccChhhhccc---eeEeeeeCC--CCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHH
Confidence 6544433 44455 787777654 57999999999997432 1 112234777776666666 666655 667
Q ss_pred HHHHHhCCEEEeecccc---cccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccC
Q 037144 257 DVAKQFGIWVHVDAAYA---GSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKN 333 (502)
Q Consensus 257 ~i~~~~g~~lhVDaA~g---~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~ 333 (502)
++|+++|+.+|+|||.- +.+.-+|- +... +.+||+++.++|.+++|. |-+++.++..+..+ .++..
T Consensus 182 ~lak~~glkLH~DGARi~NAavasgV~v-k~i~---~~fDSVsiCLSKglgAPV--GSViVG~k~FI~kA-----~~~RK 250 (384)
T KOG1368|consen 182 ALAKRHGLKLHMDGARIFNAAVASGVPV-KKIC---SAFDSVSICLSKGLGAPV--GSVIVGSKDFIDKA-----RHFRK 250 (384)
T ss_pred HHHhccCCeeecchhhhhhHHHHcCCCH-HHHH---HhhhhhhhhhhccCCCCc--ccEEEccHHHHHHH-----HHHHH
Confidence 78999999999999852 12222221 2222 278999999999999994 45555555433221 22221
Q ss_pred ccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEE
Q 037144 334 EATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCF 412 (502)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f 412 (502)
++.++.|-...-..+++-.+ .+.+ ..+++.++.|+.+.+.+...+++++-.+ .+.+++.+
T Consensus 251 -----------------alGGGmRQsGvLaaaaLval-~~~~-~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~ 311 (384)
T KOG1368|consen 251 -----------------ALGGGMRQSGVLAAAALVAL-DENV-PLLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNM 311 (384)
T ss_pred -----------------HhcCchhHHHHHHHHHHHHh-hcch-HHHHHHHHHHHHHHHHhccccceeeecchhhcceeee
Confidence 22223232222222333332 2222 3667788899999999998877887544 57888877
Q ss_pred EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHH
Q 037144 413 RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAW 492 (502)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~ 492 (502)
.+....+ ....|++.+.+.|...+.... ..+|+++. +..+.++++.++
T Consensus 312 ~l~q~~~---------------------------~~~~l~~~~~k~gi~lm~~~s----~r~Rivlh-~Qvt~~~ve~~~ 359 (384)
T KOG1368|consen 312 VLCQARL---------------------------TAEELCKFLEKNGILLMGGAS----RRIRIVLH-HQVTDEDVEYVK 359 (384)
T ss_pred ecccccC---------------------------CHHHHHHHHHHCCeEEeeccc----cceEEEEE-EecCHHHHHHHH
Confidence 6654322 135778888888987666543 23899984 667777999999
Q ss_pred HHHHH
Q 037144 493 TVVQE 497 (502)
Q Consensus 493 ~~l~~ 497 (502)
..+++
T Consensus 360 ~~~~k 364 (384)
T KOG1368|consen 360 SVLSK 364 (384)
T ss_pred HHHHH
Confidence 99954
No 106
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.86 E-value=6.3e-19 Score=193.54 Aligned_cols=367 Identities=11% Similarity=0.036 Sum_probs=229.0
Q ss_pred chhHhhcCCCCCCC--CCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcC--CCCccc--ccC
Q 037144 38 PGYLKKRLPESAPY--SPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFN--VVGLDW--ISS 111 (502)
Q Consensus 38 ~~~l~~~~~~~~p~--~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n--~~~~~~--~~~ 111 (502)
|..++.. +..+|. .+.|..++++++.++...+.. +..|.|--.-+.-+|+.+.+.+..... .....| +.+
T Consensus 68 P~~i~~~-~l~lp~~~~~~sE~e~~~~~~~la~kN~~---~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEis 143 (993)
T PLN02414 68 PKSIRLD-SMKLSKYDEGLTESQMLEHMKSLASKNKV---FKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIA 143 (993)
T ss_pred CHHHhcC-CCCCCCCCCCCCHHHHHHHHHHHHhcCCc---cccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHH
Confidence 4444322 456672 478999999999988665543 333433222222345555343332211 111223 233
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH
Q 037144 112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA 191 (502)
Q Consensus 112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 191 (502)
.+.-+.-.+...++++|+|++.+ +..++.++|.+.-.+++ +... . .+ ++.+|++++..|++....
T Consensus 144 QG~lqal~~~Qt~ia~LtG~~~a-------naSL~d~aTAaaea~~~-a~~~--~----~g-~~~~VlVs~~~hP~~~~v 208 (993)
T PLN02414 144 QGRLESLLNYQTMITDLTGLPMS-------NASLLDEGTAAAEAMAM-CNNI--L----KG-KKKKFLIASNCHPQTIDV 208 (993)
T ss_pred HHHHHHHHHHHHHHHHHhCCChh-------hEeecCChHHHHHHHHH-HHhc--c----cC-CCCEEEEcCccCHhHHHH
Confidence 44444445677899999999875 57888888876643333 3321 0 01 346799999999876543
Q ss_pred ----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144 192 ----AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 192 ----a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh 267 (502)
++..|+ +++.+|.+. .+ ...++ . +.+++.-.+.+|.+.|+++|+++|+++|++++
T Consensus 209 ~~t~a~~~Gi---eV~~v~~~~-----~~------~~~~~------v-~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~i 267 (993)
T PLN02414 209 CQTRADGLGL---EVVVADEKD-----FD------YSSGD------V-CGVLVQYPATDGEVLDYAEFVKNAHANGVKVV 267 (993)
T ss_pred HHHhhhhcCC---EEEEecchh-----hc------cccCc------e-EEEEEecCCCCeEEcCHHHHHHHHHHcCCEEE
Confidence 455688 999998752 11 01111 1 23335556689999999999999999999999
Q ss_pred eecccccccccCccchhhhcCCCCCCeeEEccCCcC-----CCCCcceEEEeeCchhhhhhhcCCcc-cccCccCCCCCc
Q 037144 268 VDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWL-----FTTLDCCCLWVKDPSCLLSTLSTNPQ-YLKNEATDQEPK 341 (502)
Q Consensus 268 VDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l-----~~p~~~g~~~~r~~~~l~~~~~~~~~-yl~~~~~~~~~~ 341 (502)
| +|+..+....+....+ +||+++.++|||+ ++|. +|+++++++. .+ ..|. .+.. ..+ .
T Consensus 268 V-aad~lal~~l~~pge~-----GADi~vgsgqKwg~P~G~GGP~-aGflavr~~~--~r---~~PgriVG~-s~d---~ 331 (993)
T PLN02414 268 M-ATDLLALTMLKPPGEW-----GADIVVGSAQRFGVPMGYGGPH-AAFLATSQEY--KR---LMPGRIIGV-SVD---S 331 (993)
T ss_pred E-EECHHHhcCCCCHhhc-----cCcEEEECCCccccCCCCCCCC-eeEEEECHHH--Hh---hCCCcccCc-ccC---C
Confidence 9 8877766665433333 8999999999998 4444 8999998753 11 2232 2221 111 0
Q ss_pred ccccCCC---cccccCCCCC-------CchHHHHHH-----HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 037144 342 EQEVGYK---DWQITLCRRF-------RSLKLWVVI-----RNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN 406 (502)
Q Consensus 342 ~~~~~~~---~~~~~~sr~~-------~al~~~~~l-----~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~ 406 (502)
.+...+. ....+-.||- ...++++++ .++|..|++++.++...++.+++++|.+. |+++..++.
T Consensus 332 ~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~-G~~~~~~~~ 410 (993)
T PLN02414 332 SGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL-GFQVQSLPF 410 (993)
T ss_pred CCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc-CCccCCCCC
Confidence 1111110 0011112221 112444443 34588999999999999999999999875 799988877
Q ss_pred eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144 407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES 486 (502)
Q Consensus 407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~ 486 (502)
+.+|+|+.. . ..++.++|.++|+. +.. .. ...+|+|+. ..++++
T Consensus 411 f~~vt~~~~-~------------------------------~~~v~~~L~~~gI~-l~~--~~-~~~lrvs~~-e~~T~e 454 (993)
T PLN02414 411 FDTVKVKCS-D------------------------------ADAIADAAAKVGIN-LRV--VD-ANTVTVSFD-ETTTLE 454 (993)
T ss_pred cCeEEEecC-C------------------------------HHHHHHHHHHCCCe-eEE--ec-CCeEEEEee-ccCCHH
Confidence 889998863 1 24667777777873 222 11 246999986 567788
Q ss_pred HHHHHHHHHHH
Q 037144 487 HVRAAWTVVQE 497 (502)
Q Consensus 487 di~~~~~~l~~ 497 (502)
|||+++++|..
T Consensus 455 dId~L~~~l~~ 465 (993)
T PLN02414 455 DVDKLFKVFAG 465 (993)
T ss_pred HHHHHHHHHcc
Confidence 99999999963
No 107
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.86 E-value=4.4e-20 Score=186.21 Aligned_cols=309 Identities=12% Similarity=0.016 Sum_probs=198.4
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEc-CCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch-h
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQ-GTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC-A 187 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t-~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~-s 187 (502)
-++.+.++-+++.+.+++++|.+++. ..+|+ +|||.++..++..... ++ .++++...|. .
T Consensus 35 r~~~f~~~~~~~r~~l~~l~~~~~~~------~v~f~~gs~T~a~~~~~~~l~~-----------~~-~l~i~~G~~~~~ 96 (361)
T TIGR01366 35 RQAPVKNLVGRVREGLAELFSLPDGY------EVILGNGGATAFWDAATFGLIE-----------KK-SLHLSFGEFSSK 96 (361)
T ss_pred CChHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCchhHHHHHHHHhccc-----------cc-ccEEecCHHHHH
Confidence 45677888889999999999996542 56664 6699888766654421 12 2233333443 3
Q ss_pred HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144 188 FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 188 ~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh 267 (502)
+.+.+....... +++.++.++.+ .++. .+.++ +.+|++++.+|.+|.+.|+++| ++++|++++
T Consensus 97 ~~~~a~~~~~~~-~~~~~~~~~~~--~~~~-----~~~~~------~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~i 159 (361)
T TIGR01366 97 FAKAVKLAPWLG-EPIIVTADPGS--APEP-----QADPG------VDVIAWAHNETSTGVAVPVRRP---EGSDDALVV 159 (361)
T ss_pred HHHHHHhhhccC-CceEEecCCCC--CCCC-----ccCCC------CCEEEEcccCCccceecccccc---cccCCCeEE
Confidence 555666543211 67788876532 3333 22222 4489999999999999999998 588999999
Q ss_pred eecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC--C----cccccCccCCCCCc
Q 037144 268 VDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST--N----PQYLKNEATDQEPK 341 (502)
Q Consensus 268 VDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~--~----~~yl~~~~~~~~~~ 341 (502)
||++++.+..+++-. .+|++++++||+++.|.|.++++++++.. .+.... . +.|+....
T Consensus 160 VDavqs~g~~~idv~--------~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~-~~~~~~~~~~~~~p~~~d~~~------ 224 (361)
T TIGR01366 160 IDATSGAGGLPVDIA--------ETDVYYFAPQKNFASDGGLWLAIMSPAAL-ERIEAIAASGRWVPEFLSLPT------ 224 (361)
T ss_pred EEcCccccCCCCCHH--------HCCEEEEEchhhcCCCCceEEEEECHHHH-hhhhcccCCCCCCchhhhHHH------
Confidence 999998888776532 48999999999999988877777776533 111110 0 11221100
Q ss_pred ccccCCCcccccCCCCC-----CchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-C--CeeE-EE
Q 037144 342 EQEVGYKDWQITLCRRF-----RSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-R--NFSL-VC 411 (502)
Q Consensus 342 ~~~~~~~~~~~~~sr~~-----~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~--~~~~-v~ 411 (502)
......+.+.+. ..+++..+++.+..+ |++.+.+++.++++++++.+.+.++++++.+ + .+++ .+
T Consensus 225 -----~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~ 299 (361)
T TIGR01366 225 -----AVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGT 299 (361)
T ss_pred -----HHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEE
Confidence 000001111111 113666778877666 6899999999999999999999976776532 1 1222 23
Q ss_pred EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHH
Q 037144 412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAA 491 (502)
Q Consensus 412 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~ 491 (502)
+.+ +.+. ....+.+.|.++|.....+...-+...+|++++++ ++++||+++
T Consensus 300 v~~-~~g~---------------------------~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~-~t~~di~~l 350 (361)
T TIGR01366 300 IDF-VDDI---------------------------DAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPA-IDPDDVEAL 350 (361)
T ss_pred EEC-CCcc---------------------------CHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCC-CCHHHHHHH
Confidence 333 2221 13456677767787543322111345899999864 667799999
Q ss_pred HHHHHHHHHhC
Q 037144 492 WTVVQEHLEAF 502 (502)
Q Consensus 492 ~~~l~~~~~~~ 502 (502)
+++|+++++++
T Consensus 351 ~~al~~~~~~~ 361 (361)
T TIGR01366 351 TECVDWVVERL 361 (361)
T ss_pred HHHHHHHHhhC
Confidence 99999988764
No 108
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.86 E-value=4.5e-19 Score=178.87 Aligned_cols=325 Identities=13% Similarity=0.054 Sum_probs=206.6
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCC-cEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNG-GGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
..+.+.+..... ....|....+...+++.+.+|+.+.+|.+.+. . ..++|+|+++++..++.+..+.
T Consensus 16 ~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~~Iiit~Gs~~ai~~~~~~~~~~------ 83 (350)
T TIGR03537 16 PFIRKALIDAVP-EVSQYPSALGTKALREAISGWFERRFGVKLDP-----DAQVLPSAGSKEAIFHFPLVFIDP------ 83 (350)
T ss_pred HHHHHHHHHHHh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCcEEEcCChHHHHHHHHHHHcCC------
Confidence 334445444432 23456555567889999999999988864321 2 5899999999887665544321
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
|.+++.|+++.++|..+..+++.+|+ +++.+|++.++++.+|++++++++.+++ .+|+++.++|+||.+
T Consensus 84 --g~~~d~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~p~NPtG~~ 152 (350)
T TIGR03537 84 --EEDRRRVIFGTPGYPVYERGALFAGG---EPTAVKLKKEDGFLLRLEKVEKSILEET------KIVWINYPHNPTGAT 152 (350)
T ss_pred --CCCCceEEEcCCCCcchHHHHHhcCC---EEEEcccCcccCCccCHHHHHHhhhhcc------EEEEEeCCCCCcCcc
Confidence 11236888899999999999999999 9999999754457799999999987643 367788899999998
Q ss_pred CC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCC-CCeeEEccCCcCCCC-CcceEEEeeCchhhhhhh
Q 037144 250 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEC-VDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTL 324 (502)
Q Consensus 250 dp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~-aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~ 324 (502)
-| +++|+++|++||+++++|.+|+......+ ... +..... -..+..+++|.++.| ...|+++ .++.... .+
T Consensus 153 ~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~-~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~-~~~~~~~-~~ 228 (350)
T TIGR03537 153 APRSYLKETIAMCREHGIILCSDECYTEIYFGEP-PHS-ALEVGIENVLAFHSLSKRSGMTGYRSGFVA-GDEKLIS-FL 228 (350)
T ss_pred cCHHHHHHHHHHHHHcCcEEEEeccccccccCCC-CCc-hhhcCcCCEEEEeecccccCCccccceeee-cCHHHHH-HH
Confidence 77 88999999999999999999975433211 111 111111 124455799998654 4466665 3443322 22
Q ss_pred cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144 325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF 403 (502)
Q Consensus 325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~ 403 (502)
.....+.. .+. ..+...++...+ ..+.+.+..+++.++.+.+.+.|++. ++++.
T Consensus 229 ~~~~~~~~---------------------~~~--~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~- 283 (350)
T TIGR03537 229 RKLRANFG---------------------VAS--PDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV-GLEYL- 283 (350)
T ss_pred HHHHHhhc---------------------cCC--CHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-
Confidence 11111110 000 111111222222 23455667777888888899999887 77765
Q ss_pred CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCC
Q 037144 404 PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNS 481 (502)
Q Consensus 404 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~ 481 (502)
+|..+.+.|...+... ...++.+.|.++|..+.++..+. +..++|++++
T Consensus 284 ~~~g~~~~~~~~~~~~---------------------------~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~-- 334 (350)
T TIGR03537 284 YPDATFYLWVKVPSGI---------------------------DAKDYALRLLENGIVVAPGENFGSGEEGYVRVALV-- 334 (350)
T ss_pred CCCeEEEEEEECCCCC---------------------------CHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEec--
Confidence 5555554433223211 02466777777786555444442 2578999985
Q ss_pred CCcHHHHHHHHHHHHH
Q 037144 482 MTMESHVRAAWTVVQE 497 (502)
Q Consensus 482 ~t~~~di~~~~~~l~~ 497 (502)
.++++++++++.+++
T Consensus 335 -~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 335 -PTLEECEEALRLWER 349 (350)
T ss_pred -CCHHHHHHHHHHHhc
Confidence 356789999888765
No 109
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.86 E-value=4.9e-19 Score=182.46 Aligned_cols=296 Identities=11% Similarity=0.083 Sum_probs=189.5
Q ss_pred HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCC
Q 037144 119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID 198 (502)
Q Consensus 119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg 198 (502)
.++.+.+++++|.+. .+++++|++||..++...... .++++|+++...|.++..+++..|.
T Consensus 94 ~~Le~~la~~~g~~~---------~i~~~sG~~a~~~~i~~l~~~---------~~g~~vi~~~~~h~s~~~~~~~~g~- 154 (410)
T PRK13392 94 VLLERELADLHGKES---------ALLFTSGYVSNDAALSTLGKL---------LPGCVILSDALNHASMIEGIRRSGA- 154 (410)
T ss_pred HHHHHHHHHHhCCCC---------EEEECcHHHHHHHHHHHHhcC---------CCCCEEEEehhhhHHHHHHHHHcCC-
Confidence 355567888888642 466667788887777643221 0456788888899999888888888
Q ss_pred CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccccc
Q 037144 199 RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI 278 (502)
Q Consensus 199 ~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~ 278 (502)
+++.++.+ |.+.+++.++... ..++.+|+++.+++++|.+-|+++|.++|++||+++++|+||+.+.+.
T Consensus 155 --~~~~~~~~-------d~~~l~~~l~~~~--~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g 223 (410)
T PRK13392 155 --EKQVFRHN-------DLADLEEQLASVD--PDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYG 223 (410)
T ss_pred --eEEEEeCC-------CHHHHHHHHHhcc--CCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcC
Confidence 87777532 5667777775432 123558889999999999999999999999999999999999844431
Q ss_pred Cccchhhh--cC-CCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCC
Q 037144 279 CPEFRHFI--DG-VECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC 355 (502)
Q Consensus 279 ~~~~~~~~--~~-~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~s 355 (502)
+...... .+ .++.|.++.+++|+++.+. |++.. ++...........+|......
T Consensus 224 -~~g~g~~~~~~~~~~~div~~tlsK~~g~~G--G~~~~-~~~~~~~l~~~~~~~~~s~~~------------------- 280 (410)
T PRK13392 224 -ARGGGIAERDGLMDRIDMIQGTLAKAFGCLG--GYIAA-SADLIDFVRSFAPGFIFTTAL------------------- 280 (410)
T ss_pred -CCCCchhhhccCCCCCcEEEEEChHhhhccc--chhhc-CHHHHHHHHHhCcchhccCcC-------------------
Confidence 2111111 11 2357888889999998653 44443 443332211222222221100
Q ss_pred CCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccc
Q 037144 356 RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQY 435 (502)
Q Consensus 356 r~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 435 (502)
.+..+.++..+++.+. ......+++.++++++++.|++. |+++. ++..+++.+.+..
T Consensus 281 ~~~~~~a~~aaL~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~------------------- 337 (410)
T PRK13392 281 PPAVAAGATAAIRHLK--TSQTERDAHQDRVAALKAKLNAN-GIPVM-PSPSHIVPVMVGD------------------- 337 (410)
T ss_pred CHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC-------------------
Confidence 0011233344555432 22345577888899999999987 78765 4566666554421
Q ss_pred cccchhHhhHHHHHHHHHHHHh-cCcEEEEeee----ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 436 RQFSEEERTNEFNRELLESINV-SGKVFMTHAI----VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 436 ~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~----~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.....++.++|.+ +|.+ +.+.. ..+..++|++++.. .+++|+++++++|+++.++
T Consensus 338 ---------~~~~~~~~~~L~~~~GI~-v~~~~~p~~~~~~~~lRis~~~~-~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 338 ---------PTLCKAISDRLMSEHGIY-IQPINYPTVPRGTERLRITPTPL-HDDEDIDALVAALVAIWDR 397 (410)
T ss_pred ---------HHHHHHHHHHHHHhCCEE-EeeeCCCCCCCCCceEEEEECCC-CCHHHHHHHHHHHHHHHHH
Confidence 1123567777764 5754 43322 13457899998654 4556999999999988764
No 110
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.86 E-value=5.3e-19 Score=181.58 Aligned_cols=327 Identities=13% Similarity=0.040 Sum_probs=211.8
Q ss_pred HHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 90 AGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
+..+.+.+...++.. ...|. .++..++.+.+.+|+.+..|.+-+. ....++|+|+++++...+.+..+
T Consensus 47 ~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~----~~~I~it~G~~~al~~~~~~~~~------ 115 (399)
T PRK07681 47 ADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNA----DKEVLLLMGSQDGLVHLPMVYAN------ 115 (399)
T ss_pred CHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCC----CCeEEECCCcHHHHHHHHHHhCC------
Confidence 445666666555432 23333 3567889999999999888864220 01588999999988666554432
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|+++.++|..+...++.+|+ +++.+|+++++.+.+|+++|++++.+.+ .+|+++.++|+||.
T Consensus 116 -----~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~v~l~~P~NPTG~ 181 (399)
T PRK07681 116 -----PGDIILVPDPGYTAYETGIQMAGA---TSYYMPLKKENDFLPDLELIPEEIADKA------KMMILNFPGNPVPA 181 (399)
T ss_pred -----CCCEEEECCCCccchHHHHHhcCC---EEEEEecCCCCCCcCCHHHHHHhccccc------eEEEEeCCCCCcCc
Confidence 678899999999999999999999 9999999865557899999999886433 37888889999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhh--cCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhh
Q 037144 249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLS 322 (502)
Q Consensus 249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~--~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~ 322 (502)
+-+ +++|+++|++||+|+++|.+|+.+........... .+...-..+..+++|.++ ....+|+++. ++....
T Consensus 182 ~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~-~~~l~~- 259 (399)
T PRK07681 182 MAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIG-NEEIVR- 259 (399)
T ss_pred CCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEec-CHHHHH-
Confidence 966 78889999999999999999986544221111111 111112245567999997 4466888865 443332
Q ss_pred hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144 323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFE 400 (502)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~ 400 (502)
.+.....+... ....+..+++...+ +.+.+++..+.+.++++++.+.|++. +++
T Consensus 260 ~~~~~~~~~~~-----------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 315 (399)
T PRK07681 260 ALTQFKSNTDY-----------------------GVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-GWN 315 (399)
T ss_pred HHHHHHhhccc-----------------------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCc
Confidence 22111111000 00122223333333 34556777777888889999999987 787
Q ss_pred EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEEEEEE
Q 037144 401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYVLRFA 477 (502)
Q Consensus 401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~~ 477 (502)
+..+.....+++++++ .. ...++.+++.+ .|..+.++..+. +..++|++
T Consensus 316 ~~~p~~g~f~~~~l~~-~~---------------------------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis 367 (399)
T PRK07681 316 VDKPAGSMFVWAEIPK-GW---------------------------TSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIA 367 (399)
T ss_pred ccCCCeeeEEEEECCC-CC---------------------------CHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEE
Confidence 6534333333444432 11 02356666665 576554443332 34699999
Q ss_pred ecCCCCcHHHHHHHHHHHHHH
Q 037144 478 AGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 478 ~~~~~t~~~di~~~~~~l~~~ 498 (502)
++. ++++++++++.|++.
T Consensus 368 ~~~---~~~~~~~~l~~l~~~ 385 (399)
T PRK07681 368 LVQ---DEEVLQQAVENIRNS 385 (399)
T ss_pred ecC---CHHHHHHHHHHHHHh
Confidence 972 567999999999874
No 111
>PRK07777 aminotransferase; Validated
Probab=99.86 E-value=3e-19 Score=182.75 Aligned_cols=330 Identities=11% Similarity=0.035 Sum_probs=212.8
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC
Q 037144 93 VGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN 172 (502)
Q Consensus 93 ~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~ 172 (502)
+.+.+...+......|...++..++++.+.+|+.+.+|.+... ....++|+|+++++..++.+...
T Consensus 42 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~~~~---------- 107 (387)
T PRK07777 42 MLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDP----DTEVLVTVGATEAIAAAVLGLVE---------- 107 (387)
T ss_pred HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCcHHHHHHHHHHhcC----------
Confidence 3344444443334457666778899999999999998875321 01488999999998766654322
Q ss_pred CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc--
Q 037144 173 ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKS-SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-- 249 (502)
Q Consensus 173 ~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~-~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-- 249 (502)
+++.|++....|..+..+++..|. +++.++.+++ .++.+|+++|++++.+.+ .+|+++.++|+||.+
T Consensus 108 -~gd~vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~ 177 (387)
T PRK07777 108 -PGDEVLLIEPYYDSYAAVIAMAGA---HRVPVPLVPDGRGFALDLDALRAAVTPRT------RALIVNSPHNPTGTVLT 177 (387)
T ss_pred -CCCEEEEeCCCchhhHHHHHHCCC---EEEEeecCCccCCCcCCHHHHHHhcCccc------EEEEEcCCCCCCCccCC
Confidence 567788888889888899999999 9999999764 357899999999886533 367788899999997
Q ss_pred -CChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhc
Q 037144 250 -DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLS 325 (502)
Q Consensus 250 -dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~ 325 (502)
+++++|.++|++|++++++|.+|+...+....+... +.+....+.+..+++|.++.| ..+|+++..+ ..+ +.+.
T Consensus 178 ~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~-~l~-~~~~ 255 (387)
T PRK07777 178 AAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPA-PLI-AAVR 255 (387)
T ss_pred HHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCH-HHH-HHHH
Confidence 458899999999999999999997654422111111 122234567788899999854 4578776543 222 2221
Q ss_pred CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 037144 326 TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR 405 (502)
Q Consensus 326 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~ 405 (502)
....+.... .+ ......+-.++. .+.+.+++..+.+.++++++.+.|++. ++++. ++
T Consensus 256 ~~~~~~~~~-------------------~~-~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~ 312 (387)
T PRK07777 256 AAKQYLTYV-------------------GG-APFQPAVAHALD-HEDAWVAALRDSLQAKRDRLAAGLAEA-GFEVH-DS 312 (387)
T ss_pred HHHhhcccC-------------------CC-CHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHhC-CCCcc-CC
Confidence 111111100 00 001111111121 245666777888889999999999887 77765 45
Q ss_pred CeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC-----CEEEEEEEe
Q 037144 406 NFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG-----GIYVLRFAA 478 (502)
Q Consensus 406 ~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~-----g~~~lR~~~ 478 (502)
+.+++.| ++.+... ....++.+++.+ .|..+.++..+. +..++|+++
T Consensus 313 ~g~~~~~~~~~~~~~--------------------------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~ 366 (387)
T PRK07777 313 AGTYFLCADPRPLGY--------------------------DDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAF 366 (387)
T ss_pred CcceEEEecccccCC--------------------------CCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEe
Confidence 5454444 4332110 002456677754 466544443332 245899998
Q ss_pred cCCCCcHHHHHHHHHHHHHHHH
Q 037144 479 GNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 479 ~~~~t~~~di~~~~~~l~~~~~ 500 (502)
+. ++++++++++.|.++..
T Consensus 367 ~~---~~~~l~~~l~~l~~~~~ 385 (387)
T PRK07777 367 CK---RDDTLDEAIRRLRALRG 385 (387)
T ss_pred cC---CHHHHHHHHHHHHHHhc
Confidence 63 57799999999987653
No 112
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.86 E-value=6.3e-19 Score=194.53 Aligned_cols=365 Identities=13% Similarity=0.095 Sum_probs=227.1
Q ss_pred chhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHh------hcCCCCcccccC
Q 037144 38 PGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSS------GFNVVGLDWISS 111 (502)
Q Consensus 38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~------~~n~~~~~~~~~ 111 (502)
|..++..-+..+|+ +.+..++++++.++...|.. ...|.|--.-+...|.++.+-+.+ .+-+++.. .+
T Consensus 43 P~~i~~~~~l~lp~-~~sE~e~~~~~~~la~~N~~---~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~E--is 116 (954)
T PRK05367 43 PASIRLAEPLDLPA-ALSEAEALAELRAIASKNKV---FRSYIGQGYYGTHTPPVILRNILENPAWYTAYTPYQPE--IS 116 (954)
T ss_pred CHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCC---CCcccCCCCCCCcCcHHHHHHHHhCcchhhccCCCChH--HH
Confidence 55665444556775 58999999999988666543 234444322223455555332221 11222222 33
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH-
Q 037144 112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK- 190 (502)
Q Consensus 112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~- 190 (502)
-+.-+.-.+...++++++|++.. +..++.++|.+.- ++..++... + + ++.+|++++..|++...
T Consensus 117 QG~Leal~~~Qt~la~LtG~~~a-------naSl~d~aTAa~e-a~~~a~~~~-~-----~-~~~~vlv~~~~hP~~~~v 181 (954)
T PRK05367 117 QGRLEALLNFQTMVADLTGLEIA-------NASLLDEATAAAE-AMALAKRVS-K-----S-KSNRFFVDDDVHPQTLDV 181 (954)
T ss_pred HHHHHHHHHHHHHHHHHHCCChh-------hccccccHHHHHH-HHHHhhhhc-c-----C-CCCEEEEcCccCHHHHHH
Confidence 34444444567899999999865 5678888886654 444443321 0 0 13689999999987553
Q ss_pred ---HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144 191 ---AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 191 ---aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh 267 (502)
.++..|+ +|+.+|.+.+ ++ .++ .+.| +..-.+.+|.+.|+++|+++||++|++++
T Consensus 182 ~~t~a~~~G~---ev~~~~~~~d----~~--------~~~------~~~v-lvq~p~~~G~i~d~~~i~~~ah~~Gal~~ 239 (954)
T PRK05367 182 LRTRAEPLGI---EVVVGDAAKA----LD--------HDD------VFGV-LLQYPGTSGEVRDYTALIAAAHARGALVA 239 (954)
T ss_pred HHHHHHhCCC---EEEEecCccC----CC--------ccc------EEEE-EEecCCCCeeeccHHHHHHHHHHcCCEEE
Confidence 4567899 9999997531 11 111 2334 44446799999999999999999999999
Q ss_pred eecccccccccCccchhhhcCCCCCCeeEEccCCcC-----CCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144 268 VDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWL-----FTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE 342 (502)
Q Consensus 268 VDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l-----~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 342 (502)
||+.+.+..+..+ .... +||+++.+.|||+ ++| ++|++++|+.. .+.+ ++-+.....+ ..
T Consensus 240 vda~~~Al~~l~~-pge~-----GaDi~vgs~qkfg~P~g~GGP-~aGflavr~~~--~r~l---pgrivG~s~d---~~ 304 (954)
T PRK05367 240 VAADLLALTLLTP-PGEM-----GADIAVGSAQRFGVPMGFGGP-HAAYFAVRDAY--KRSM---PGRIVGVSVD---AA 304 (954)
T ss_pred EEehhhhccCCCC-hhhc-----CCCEEEeeCcccCCCCCCCCC-CEEEEEECHHH--HhhC---CCCeeeeecc---cC
Confidence 9996644333332 2222 8999999999994 444 49999998652 2222 2222111111 00
Q ss_pred cccCCC--cccc-cCCCCCCc----------hHHH--HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 037144 343 QEVGYK--DWQI-TLCRRFRS----------LKLW--VVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNF 407 (502)
Q Consensus 343 ~~~~~~--~~~~-~~sr~~~a----------l~~~--~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~ 407 (502)
+...+. -.+- +--||-.+ +++. +.+.++|.+|++++.++...++.+++++|++ +|+++..++.+
T Consensus 305 g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~~~~~f 383 (954)
T PRK05367 305 GNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA-LGLEVVHDSFF 383 (954)
T ss_pred CCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh-cCcccCCCCCC
Confidence 111010 0011 11123211 1122 2235579999999999999999999999987 58998877777
Q ss_pred eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144 408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH 487 (502)
Q Consensus 408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d 487 (502)
.+++|+.... ..++.+++.++|+.. .. .....+|+|++ ..++++|
T Consensus 384 ~~~~~~~~~~------------------------------~~~i~~~l~~~gi~~-~~---~~~~~l~is~~-e~~t~~d 428 (954)
T PRK05367 384 DTLTVEVGGD------------------------------AAAVLARALAAGINL-RR---VDDDHVGISLD-ETTTRED 428 (954)
T ss_pred CeEEEeCCCC------------------------------HHHHHHHHHHCCcee-cc---ccCCEEEEEec-ccCCHHH
Confidence 8888875311 346777787888643 11 11346999986 5577889
Q ss_pred HHHHHHHHH
Q 037144 488 VRAAWTVVQ 496 (502)
Q Consensus 488 i~~~~~~l~ 496 (502)
|+++++++.
T Consensus 429 id~l~~~l~ 437 (954)
T PRK05367 429 LAALLAVFG 437 (954)
T ss_pred HHHHHHHHc
Confidence 999999996
No 113
>PRK08912 hypothetical protein; Provisional
Probab=99.85 E-value=7.8e-19 Score=179.67 Aligned_cols=315 Identities=12% Similarity=0.050 Sum_probs=206.3
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144 106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH 185 (502)
Q Consensus 106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (502)
..|....+..++++.+++|+.+.+|.+... ....++|+|+++++..++....+ +++.|+++..+|
T Consensus 57 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~~~~-----------~gd~Vlv~~p~y 121 (387)
T PRK08912 57 NQYPPMMGLPELRQAVAAHYARFQGLDLDP----ETEVMVTSGATEALAAALLALVE-----------PGDEVVLFQPLY 121 (387)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----cccEEEeCCcHHHHHHHHHHhcC-----------CCCEEEEeCCCc
Confidence 456655667889999999999888864221 01588999999988665554432 567888999999
Q ss_pred hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHh
Q 037144 186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQF 262 (502)
Q Consensus 186 ~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~ 262 (502)
..+..+++..|. +++.+|++.+ ++.+|+++|++.+.+.+ .+|+++.++|+||.+-+ +++|.++|++|
T Consensus 122 ~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~ 191 (387)
T PRK08912 122 DAYLPLIRRAGG---VPRLVRLEPP-HWRLPRAALAAAFSPRT------KAVLLNNPLNPAGKVFPREELALLAEFCQRH 191 (387)
T ss_pred hhhHHHHHHcCC---EEEEEecCcc-cCcCCHHHHHHHhCccc------eEEEEeCCCCCcCcccCHHHHHHHHHHHHHC
Confidence 999999999999 9999998743 47899999999886433 36777899999999865 77799999999
Q ss_pred CCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCC
Q 037144 263 GIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE 339 (502)
Q Consensus 263 g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 339 (502)
++++++|.+|+...+........ +.+...-+.+..+++|.++ ....+|+++.. +.... .+........
T Consensus 192 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~-~~~~~-~l~~~~~~~~------- 262 (387)
T PRK08912 192 DAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAA-PPLLR-VLAKAHQFLT------- 262 (387)
T ss_pred CeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecC-HHHHH-HHHHHHhhcc-------
Confidence 99999999997654321111111 1222234577888999997 44557888764 33322 2211100000
Q ss_pred CcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEE-EEeec
Q 037144 340 PKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVC-FRVTP 416 (502)
Q Consensus 340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~-f~~~~ 416 (502)
++ . .+....++...+ ..+.+++..++..++++++.+.|++. ++++. ++..+.+. +.+++
T Consensus 263 ----------~~--~----~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~l~~~l~~ 324 (387)
T PRK08912 263 ----------FT--T----PPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI-GFPVL-PSQGTYFLTVDLAP 324 (387)
T ss_pred ----------cc--C----ChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCcceEEEecccc
Confidence 00 0 111111222222 23456777888889999999999987 77765 45555443 44432
Q ss_pred CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC----CEEEEEEEecCCCCcHHHHHHH
Q 037144 417 SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG----GIYVLRFAAGNSMTMESHVRAA 491 (502)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~----g~~~lR~~~~~~~t~~~di~~~ 491 (502)
.+. .....++.+++. +.|..+.++..+. +..++|++++. +++.++.+
T Consensus 325 ~~~-------------------------~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~---~~~~l~~~ 376 (387)
T PRK08912 325 LGL-------------------------AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK---RDATLDEA 376 (387)
T ss_pred cCC-------------------------CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC---CHHHHHHH
Confidence 110 000235566654 4576555544442 24799999984 46799999
Q ss_pred HHHHHHHHH
Q 037144 492 WTVVQEHLE 500 (502)
Q Consensus 492 ~~~l~~~~~ 500 (502)
++.|.+..+
T Consensus 377 l~rl~~~l~ 385 (387)
T PRK08912 377 VERLAAARR 385 (387)
T ss_pred HHHHHHHHh
Confidence 999988654
No 114
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.85 E-value=1.4e-20 Score=185.00 Aligned_cols=171 Identities=13% Similarity=0.046 Sum_probs=132.3
Q ss_pred HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCC
Q 037144 119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID 198 (502)
Q Consensus 119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg 198 (502)
+++.+.+++++|.+.. .++|+|+|+++..++.+... +++.|+++..+|.|+..++.+.|+
T Consensus 62 ~~~~~~~A~~~ga~~~--------~~~~~Gst~a~~~~l~al~~-----------~gd~Vlv~~~~h~s~~~~~~~~g~- 121 (294)
T cd00615 62 KEAQELAARAFGAKHT--------FFLVNGTSSSNKAVILAVCG-----------PGDKILIDRNCHKSVINGLVLSGA- 121 (294)
T ss_pred HHHHHHHHHHhCCCCE--------EEEcCcHHHHHHHHHHHcCC-----------CCCEEEEeCCchHHHHHHHHHCCC-
Confidence 4455678899997642 35588889999777766543 678899999999999999999998
Q ss_pred CCCEEEEecCCCCC----cccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144 199 RKNIRAIKTTKSSS----YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 274 (502)
Q Consensus 199 ~~~v~~v~~~~~~~----~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~ 274 (502)
+++.++.+.+.+ +.+|++++++++++.. .+.+|+++.+ |.+|.+.|+++|+++|+++|++++||+||++
T Consensus 122 --~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~----~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~ 194 (294)
T cd00615 122 --VPVYLKPERNPYYGIAGGIPPETFKKALIEHP----DAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGA 194 (294)
T ss_pred --EEEEecCccCcccCcCCCCCHHHHHHHHHhCC----CceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchh
Confidence 999998764332 4799999999997532 2457778876 6899999999999999999999999999987
Q ss_pred ccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc
Q 037144 275 SACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP 317 (502)
Q Consensus 275 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~ 317 (502)
...+.+....... ..++|+++.++||++.++.++|++++++.
T Consensus 195 ~~~~~~~~~~~~~-~~~~div~~S~hK~l~g~~~~~~l~~~~~ 236 (294)
T cd00615 195 HFRFHPILPSSAA-MAGADIVVQSTHKTLPALTQGSMIHVKGD 236 (294)
T ss_pred hhccCcccCcchh-hcCCcEEEEchhcccchHhHHHHHHhCCC
Confidence 6543332221111 12799999999999988877888877655
No 115
>PRK09082 methionine aminotransferase; Validated
Probab=99.85 E-value=2.7e-19 Score=182.86 Aligned_cols=325 Identities=10% Similarity=0.054 Sum_probs=213.0
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (502)
..+.+.+...+......|....+..++++.+.+++.+++|.+... ....++|+|+++++..++.+...
T Consensus 46 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~----~~~i~~t~G~~~al~~~~~~~~~-------- 113 (386)
T PRK09082 46 PYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDA----DSEITVTAGATEALFAAILALVR-------- 113 (386)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCHHHHHHHHHHHHcC--------
Confidence 345555555554334456666678899999999999999975321 01488999999998877765432
Q ss_pred cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-
Q 037144 171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV- 249 (502)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i- 249 (502)
+++.|+++...|.++..+++..|. +++.+|++.. ++.+|++++++++++. +.+|+++.++|+||.+
T Consensus 114 ---~gd~Vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~ 180 (386)
T PRK09082 114 ---PGDEVIVFDPSYDSYAPAIELAGG---RAVRVALQPP-DFRVDWQRFAAAISPR------TRLIILNTPHNPSGTVW 180 (386)
T ss_pred ---CCCEEEEeCCCchhhHHHHHHcCC---EEEEEecCcc-cccCCHHHHHHhcCcc------ceEEEEeCCCCCCCcCC
Confidence 677888999999999999999999 9999999753 5799999999998653 3367788899999987
Q ss_pred --CChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhh
Q 037144 250 --DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTL 324 (502)
Q Consensus 250 --dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~ 324 (502)
+++++|.++|++||+++++|.+|+...+........ ..+...-..+..+++|.++.| ..+|+++.. +..+. .+
T Consensus 181 ~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~-~~l~~-~~ 258 (386)
T PRK09082 181 SAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAP-AALSA-EF 258 (386)
T ss_pred CHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCC-HHHHH-HH
Confidence 789999999999999999999997654422111111 112222346667799999644 457777753 33322 22
Q ss_pred cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
.....+... ....+..+++...+ ..+.++++.+.+.++++++.+.|++. ++++.
T Consensus 259 ~~~~~~~~~-----------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~ 314 (386)
T PRK09082 259 RKVHQYNTF-----------------------TVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS-RFKLL 314 (386)
T ss_pred HHHHhhhcC-----------------------CCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC-CCccc
Confidence 111111100 00122222222222 35566777778888999999999885 77765
Q ss_pred cCCCeeEEEE-Eeec-CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC----CEEEEE
Q 037144 403 FPRNFSLVCF-RVTP-SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG----GIYVLR 475 (502)
Q Consensus 403 ~~~~~~~v~f-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~----g~~~lR 475 (502)
++..+++.| +++. .+. + ..++.+.+. +.|..+.++..+. +..++|
T Consensus 315 -~~~g~~~~~~~~~~~~~~-------------------------~--~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~R 366 (386)
T PRK09082 315 -PCEGTYFQLVDYSAISDL-------------------------D--DVEFCQWLTREHGVAAIPLSVFYADPFPHRLVR 366 (386)
T ss_pred -CCCeeEEEEEeccccCCC-------------------------C--HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEE
Confidence 556665554 4431 110 0 234555554 3465444433332 246899
Q ss_pred EEecCCCCcHHHHHHHHHHHHH
Q 037144 476 FAAGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 476 ~~~~~~~t~~~di~~~~~~l~~ 497 (502)
++++. +++++++.++.|++
T Consensus 367 i~~~~---~~~~l~~~~~rl~~ 385 (386)
T PRK09082 367 LCFAK---QEETLDAAAERLCQ 385 (386)
T ss_pred EEecC---CHHHHHHHHHHHhh
Confidence 99873 56789999988865
No 116
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.85 E-value=1.1e-18 Score=178.61 Aligned_cols=334 Identities=15% Similarity=0.156 Sum_probs=209.8
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+......|....+..++++.+.+++...+|.+-.. ....++|+|+++++..++.+...
T Consensus 45 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~----~~~i~it~G~~~al~~~~~~~~~------- 113 (391)
T PRK07309 45 PDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAP----ENEILVTIGATEALSASLTAILE------- 113 (391)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhcC-------
Confidence 3445555554443322345555567889999999999888863210 01589999999998777665432
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|++..+.|..+...++..|+ +++.+|++.+ ++.+|++.|++++++.. ..+.+|+++.++|+||.+
T Consensus 114 ----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~---~~~~~i~l~~P~NPtG~~ 182 (391)
T PRK07309 114 ----PGDKVLLPAPAYPGYEPIVNLVGA---EIVEIDTTEN-DFVLTPEMLEKAILEQG---DKLKAVILNYPANPTGVT 182 (391)
T ss_pred ----CCCEEEEeCCCCcchHHHHHHcCC---EEEEEecCCc-CCcCCHHHHHHHhhccC---CCeEEEEEECCCCCCCcC
Confidence 567788888899889999999999 9999998653 46899999999986421 124477888899999987
Q ss_pred C---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhc
Q 037144 250 D---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLS 325 (502)
Q Consensus 250 d---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~ 325 (502)
- ++++|+++|++||+++++|++|+......+...........--.+..+++|.++.| ..+|+++.. +..+....
T Consensus 183 ~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~-~~~~~~~~- 260 (391)
T PRK07309 183 YSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAP-AEFTAQLI- 260 (391)
T ss_pred cCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeC-HHHHHHHH-
Confidence 4 58999999999999999999997655422111111110111125667799998744 456777654 43332221
Q ss_pred CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144 326 TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF 403 (502)
Q Consensus 326 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~ 403 (502)
....|.... ...+...++.+.+ +........+++.+.++++.+.|++. ++++.
T Consensus 261 ~~~~~~~~~-----------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~- 315 (391)
T PRK07309 261 KSHQYLVTA-----------------------ATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL-GFKII- 315 (391)
T ss_pred HHHhhcccC-----------------------CChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC-CCeec-
Confidence 111121110 0122222233333 22333445566777888899999887 67765
Q ss_pred CCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEEEec
Q 037144 404 PRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRFAAG 479 (502)
Q Consensus 404 ~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~ 479 (502)
+|..+++.| ++++ .. .....++.+++. +.|..+.++..+. +..++|++++
T Consensus 316 ~p~gg~~~~~~l~~-~~-------------------------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~ 369 (391)
T PRK07309 316 KPDGAFYIFAKIPA-GY-------------------------NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA 369 (391)
T ss_pred CCCeeEEEEEECCC-CC-------------------------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec
Confidence 455555444 3332 11 000234555544 4566544443332 3579999987
Q ss_pred CCCCcHHHHHHHHHHHHHHHHh
Q 037144 480 NSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 480 ~~~t~~~di~~~~~~l~~~~~~ 501 (502)
. +.++++.+++.|.++.++
T Consensus 370 ~---~~~~l~~~i~~l~~~~~~ 388 (391)
T PRK07309 370 A---SMETIKEAMKRLKEYMEE 388 (391)
T ss_pred C---CHHHHHHHHHHHHHHHHh
Confidence 3 467999999999988765
No 117
>PRK12414 putative aminotransferase; Provisional
Probab=99.85 E-value=3.5e-19 Score=181.86 Aligned_cols=327 Identities=10% Similarity=0.071 Sum_probs=210.0
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+......|....+..++.+.+.+|+++++|.+... ....++|+|+++++..++.+..+
T Consensus 44 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~----~~~i~it~g~~~al~~~~~~l~~------- 112 (384)
T PRK12414 44 DPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDP----ASEVTVIASASEGLYAAISALVH------- 112 (384)
T ss_pred CHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEECChHHHHHHHHHHhcC-------
Confidence 4445555544433223456666677889999999999999985210 01589999999988766655432
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|+++..+|..+...++..|+ +++.+|++++ ++.+|++.|++++++. +.+|+++.++|+||.+
T Consensus 113 ----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~i~~p~NPTG~~ 178 (384)
T PRK12414 113 ----PGDEVIYFEPSFDSYAPIVRLQGA---TPVAIKLSPE-DFRVNWDEVAAAITPR------TRMIIVNTPHNPSATV 178 (384)
T ss_pred ----CCCEEEEeCCCccchHHHHHHcCC---EEEEEecCcc-ccccCHHHHHhhcCcc------cEEEEEcCCCCCCCcC
Confidence 677888899999898889999999 9999998753 4789999999988643 3477788999999997
Q ss_pred ---CChhHHHHHHHHhCCEEEeecccccccccCccchhhh--cCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhh
Q 037144 250 ---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLST 323 (502)
Q Consensus 250 ---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~--~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~ 323 (502)
+++++|+++|++||+|+++|++|.-..+......... .....--.++.+++|.++ ....+|+++..+ .... .
T Consensus 179 ~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~-~l~~-~ 256 (384)
T PRK12414 179 FSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPA-ELMD-E 256 (384)
T ss_pred CCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCH-HHHH-H
Confidence 6789999999999999999999976443211111111 111112256677999996 445678877643 3222 2
Q ss_pred hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV-ANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
+.....+.. .....+..+++...+.. ..+.+..+.+.+.++++.+.|++. ++++.
T Consensus 257 l~~~~~~~~-----------------------~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~ 312 (384)
T PRK12414 257 IRKVHQFMV-----------------------FSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS-RFELL 312 (384)
T ss_pred HHHHHhhee-----------------------cCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-CCeec
Confidence 211111100 00122333333343321 234456677788889999999887 67765
Q ss_pred cCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHH-HHHHhcCcEEEEeeeEC--C--EEEEEE
Q 037144 403 FPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELL-ESINVSGKVFMTHAIVG--G--IYVLRF 476 (502)
Q Consensus 403 ~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~~~--g--~~~lR~ 476 (502)
++..+++.| ++.+.. + ....++. +.+.+.|..+.++..+. + ..++|+
T Consensus 313 -~~~gg~~~~~~~~~~~---------------------~-----~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRi 365 (384)
T PRK12414 313 -PSEGSFFMLARFRHFS---------------------D-----ESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRL 365 (384)
T ss_pred -CCCcceEEEEcccccC---------------------C-----CCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEE
Confidence 566666655 443210 0 0012333 44455687666554442 2 468999
Q ss_pred EecCCCCcHHHHHHHHHHHHH
Q 037144 477 AAGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 477 ~~~~~~t~~~di~~~~~~l~~ 497 (502)
+++. ++++++..++.|.+
T Consensus 366 s~~~---~~~~~~~~~~rl~~ 383 (384)
T PRK12414 366 SFSK---DDATLVEGARRLCS 383 (384)
T ss_pred EecC---CHHHHHHHHHHHhh
Confidence 9973 47789998888764
No 118
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.85 E-value=2.2e-18 Score=177.18 Aligned_cols=340 Identities=11% Similarity=0.036 Sum_probs=213.5
Q ss_pred HHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144 89 VAGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK 167 (502)
Q Consensus 89 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~ 167 (502)
++..+.+.+...++.. ...|...++..++.+.+.+++.+. |.+-. ....++|+|+++++..++.+...
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~~-----~~~i~~t~G~~~al~~~~~~l~~----- 117 (401)
T TIGR01264 49 TDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DGPIE-----ADDVVLCSGCSHAIEMCIAALAN----- 117 (401)
T ss_pred CCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CCCCC-----HHHEEECcChHHHHHHHHHHhCC-----
Confidence 3455666666655443 234656667788888888888763 33211 12588999999998777665533
Q ss_pred hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
+++.|+++...+..+...++..|+ +++.++++.++++.+|++.|++++++.+ .+|+++.++|+||
T Consensus 118 ------~gd~v~i~~P~y~~~~~~~~~~g~---~v~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~~p~NPtG 182 (401)
T TIGR01264 118 ------AGQNILVPRPGFPLYETLAESMGI---EVKLYNLLPDKSWEIDLKQLESLIDEKT------AALIVNNPSNPCG 182 (401)
T ss_pred ------CCCEEEEeCCCChhHHHHHHHcCC---EEEEeecCCccCCCCCHHHHHHHhccCc------eEEEEcCCCCCCC
Confidence 566788888888888889999999 9999998755467999999999886533 3678888999999
Q ss_pred ccC---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCC-eeEEccCCcC-CCCCcceEEEeeCch-hhh
Q 037144 248 AVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVD-SFSFNPHKWL-FTTLDCCCLWVKDPS-CLL 321 (502)
Q Consensus 248 ~id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aD-si~~~~hK~l-~~p~~~g~~~~r~~~-~l~ 321 (502)
.+- ++++|+++|+++|+++++|.+|..+............-..... .++.++.|.+ .....+|+++..++. .+.
T Consensus 183 ~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~ 262 (401)
T TIGR01264 183 SVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILR 262 (401)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHH
Confidence 984 5889999999999999999999765532211111111011112 4556799974 555678888875421 111
Q ss_pred hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144 322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSDKR 398 (502)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~~ 398 (502)
+.+..... +.... ++ ...+...++...+ ..+.+++.++++.+.++++.+.|+++++
T Consensus 263 ~~~~~~~~-~~~~~--------------~~------~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~ 321 (401)
T TIGR01264 263 DIRDGLVK-LSQRI--------------LG------PCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPG 321 (401)
T ss_pred HHHHHHHH-Hhhcc--------------CC------CCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 11110000 00000 00 0122222222222 2466777888888899999999998877
Q ss_pred eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEEE
Q 037144 399 FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRFA 477 (502)
Q Consensus 399 ~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~ 477 (502)
+....+.....+.+++...... + .....++.+++. +.|..+.++..+...+++|++
T Consensus 322 ~~~~~p~~g~f~~~~~~~~~~~-------------------~----~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis 378 (401)
T TIGR01264 322 LRPVMPSGAMYMMVGIEMEHFP-------------------E----FKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVV 378 (401)
T ss_pred CcccCCCeeeEEEEEecccccC-------------------C----CCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEE
Confidence 7654343444444444321000 0 000235566665 567765555445446799999
Q ss_pred ecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 478 AGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 478 ~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
++. ++++++.+++.|.+.+++
T Consensus 379 ~~~---~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 379 LTV---PVVMMEEACSRIQEFCER 399 (401)
T ss_pred EcC---CHHHHHHHHHHHHHHHhc
Confidence 973 467999999999888765
No 119
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.85 E-value=4.1e-19 Score=181.25 Aligned_cols=324 Identities=11% Similarity=0.086 Sum_probs=199.6
Q ss_pred HHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 90 AGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
+..+.+.+...++.. ...|....+.. ++++++++++|++.. ..++|+|+|+++..++.+...
T Consensus 43 ~~~~~~a~~~~~~~~~~~~y~~~~g~~----~lr~~ia~~l~~~~~-------~v~~~~g~t~al~~~~~~~~~------ 105 (380)
T PRK06225 43 HEEVREAMIRCIEEGEYCKYPPPEGFP----ELRELILKDLGLDDD-------EALITAGATESLYLVMRAFLS------ 105 (380)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCcchH----HHHHHHHHhcCCCCC-------cEEEeCCHHHHHHHHHHHhcC------
Confidence 344555665555432 22332222223 355667788888654 589999999998877766532
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK-SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
+++.|++++..|..+..+++..|. +++.+|++. .+++.+|+++|++++.+.+ .+|+++.++|++|
T Consensus 106 -----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NptG 171 (380)
T PRK06225 106 -----PGDNAVTPDPGYLIIDNFASRFGA---EVIEVPIYSEECNYKLTPELVKENMDENT------RLIYLIDPLNPLG 171 (380)
T ss_pred -----CCCEEEEcCCCCcchHHHHHHhCc---eEEeeccccccCCccCCHHHHHhhcCCCc------eEEEEeCCCCCCC
Confidence 456778888888888888899999 999999753 2346899999999886543 3677778899999
Q ss_pred cc---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhh
Q 037144 248 AV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLST 323 (502)
Q Consensus 248 ~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~ 323 (502)
.+ +++++|+++|+++|+++++|++|+.+....+.... + ......+..+++|+++.| ..+|+++.+ +.... .
T Consensus 172 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~--~~~~~i~~~s~SK~~g~~G~RiG~i~~~-~~l~~-~ 246 (380)
T PRK06225 172 SSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAE-Y--APEHTVTSYSFSKIFGMAGLRIGAVVAT-PDLIE-V 246 (380)
T ss_pred cCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhh-c--CCCCEEEEeechhhcCCccceeEEEecC-HHHHH-H
Confidence 97 45999999999999999999998654221111010 0 012335566789999644 447888874 33322 2
Q ss_pred hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-
Q 037144 324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA- 402 (502)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~- 402 (502)
+.. +.... ++ ........+..++.. ..+.++...+...++++.+.+.|++++++.+.
T Consensus 247 ~~~---~~~~~---------------~~---~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 304 (380)
T PRK06225 247 VKS---IVIND---------------LG---TNVIAQEAAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPV 304 (380)
T ss_pred HHH---HHhcc---------------cC---CCHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcCCcccc
Confidence 211 10000 00 000011111222222 22334444555666777888888887776432
Q ss_pred cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE---CCEEEEEEEec
Q 037144 403 FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV---GGIYVLRFAAG 479 (502)
Q Consensus 403 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lR~~~~ 479 (502)
.++..+++.+.+.+... + ..++.+++.+.|..+.++..+ .+..++|+++.
T Consensus 305 ~~~~g~~~~~~~~~~~~-------------------------~--~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~ 357 (380)
T PRK06225 305 YPSHGNMMVIDISEAGI-------------------------D--PEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFS 357 (380)
T ss_pred CCCCCeEEEEEcccccC-------------------------C--HHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeC
Confidence 24455566655543211 0 235667777778644332211 23568999986
Q ss_pred CCCCcHHHHHHHHHHHHHHHHh
Q 037144 480 NSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 480 ~~~t~~~di~~~~~~l~~~~~~ 501 (502)
. ++++++++++.|+++.++
T Consensus 358 ~---~~e~l~~~~~~l~~~~~~ 376 (380)
T PRK06225 358 I---PREQVEVFCEEFPDVVET 376 (380)
T ss_pred C---CHHHHHHHHHHHHHHHHH
Confidence 3 577999999999988764
No 120
>PRK07337 aminotransferase; Validated
Probab=99.85 E-value=1.2e-18 Score=178.45 Aligned_cols=330 Identities=14% Similarity=0.054 Sum_probs=210.1
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+......|....+..++++.+.+|+.+.+|..-.. ...++|+|+++++..++.+..+
T Consensus 45 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~i~~t~G~~~al~~~~~~l~~------- 112 (388)
T PRK07337 45 PEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAP-----ERIVVTAGASAALLLACLALVE------- 112 (388)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----HhEEEecCcHHHHHHHHHHhcC-------
Confidence 3445566666554444456666667889999999999988863221 2688999999988766654432
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|+++.++|......++..|. +++.+|++.++++.+|+++|++.+.+.+ .+|+++.++|+||.+
T Consensus 113 ----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~ 179 (388)
T PRK07337 113 ----RGDEVLMPDPSYPCNRHFVAAAEG---RPVLVPSGPAERFQLTAADVEAAWGERT------RGVLLASPSNPTGTS 179 (388)
T ss_pred ----CCCEEEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCcCCHHHHHhhcCccc------eEEEEECCCCCCCcC
Confidence 678899999999999898898998 9999999764568999999999886543 367778899999997
Q ss_pred CC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeE-EccCCcCCCC-CcceEEEeeCchhhhhhh
Q 037144 250 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFS-FNPHKWLFTT-LDCCCLWVKDPSCLLSTL 324 (502)
Q Consensus 250 dp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~-~~~hK~l~~p-~~~g~~~~r~~~~l~~~~ 324 (502)
-+ +++|+++|+++|+|+++|.+|....... ...... .+ ..+.++ .+++|.++.| ..+|+++..+ .... .+
T Consensus 180 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~-~~-~~~vi~~~S~SK~~~~~G~RiG~~~~~~-~l~~-~l 254 (388)
T PRK07337 180 IAPDELRRIVEAVRARGGFTIVDEIYQGLSYDA-APVSAL-SL-GDDVITINSFSKYFNMTGWRLGWLVVPE-ALVG-TF 254 (388)
T ss_pred cCHHHHHHHHHHHHHCCCEEEEeccccccccCC-CCcChh-hc-cCCEEEEEechhhcCCchhheeeeecCH-HHHH-HH
Confidence 54 7888899999999999999997654321 111111 11 234554 5799999644 4578877643 2222 22
Q ss_pred cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG---VANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
.....+... ....+..+++...+. .+.+.+..+++.+.++++.+.|++. ++.+
T Consensus 255 ~~~~~~~~~-----------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~ 310 (388)
T PRK07337 255 EKLAQNLFI-----------------------CASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKV 310 (388)
T ss_pred HHHHHHhcc-----------------------CCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CCcc
Confidence 111111100 002233333333332 2446667777888889999999886 6654
Q ss_pred ecCCCeeE-EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC---CEEEEEE
Q 037144 402 AFPRNFSL-VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG---GIYVLRF 476 (502)
Q Consensus 402 ~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~---g~~~lR~ 476 (502)
...|..++ +++.++.... + + .....++.+++. +.|..+.++..+. +..++|+
T Consensus 311 ~~~p~~g~f~~~~~~~~~~------------~-------~----~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri 367 (388)
T PRK07337 311 PVMPDGAFYVYADCRGVAH------------P-------A----AGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRL 367 (388)
T ss_pred ccCCCeeEEEEEecccccC------------C-------C----CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEE
Confidence 32344444 4444432100 0 0 000234555543 4566554444342 2479999
Q ss_pred EecCCCCcHHHHHHHHHHHHHHH
Q 037144 477 AAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 477 ~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
+++. ++++++..++.|.++.
T Consensus 368 ~~~~---~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 368 SYAT---SMSRLEEAVARLGKLF 387 (388)
T ss_pred EecC---CHHHHHHHHHHHHHHh
Confidence 9974 4678888888887653
No 121
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.85 E-value=4.7e-19 Score=178.58 Aligned_cols=284 Identities=13% Similarity=0.062 Sum_probs=189.0
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR 199 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~ 199 (502)
++++.+++++|++.+ ..++|+|+++++..++.+... +++.|+++...|..+...++..|+
T Consensus 58 ~lr~~ia~~~~~~~~-------~i~~~~G~~~~l~~~~~~l~~-----------~gd~v~~~~p~y~~~~~~~~~~g~-- 117 (346)
T TIGR01141 58 ELKQALADYYGVDPE-------QILLGNGSDEIIELLIRAFLE-----------PGDAVLVPPPTYSMYEISAKIHGA-- 117 (346)
T ss_pred HHHHHHHHHhCcChH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCHHHHHHHHHHcCC--
Confidence 355566777777543 588999999887655544322 567788888887777778889999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh--CCEEEeecccccccc
Q 037144 200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSAC 277 (502)
Q Consensus 200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~--g~~lhVDaA~g~~~~ 277 (502)
+++.+|++. ++.+|++.|++++.+.+ .+|+++.++|++|.+-|++++.++|+.+ |+++++|++|+....
T Consensus 118 -~~~~~~~~~--~~~~d~~~l~~~~~~~~------~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~ 188 (346)
T TIGR01141 118 -EVVKVPLDE--DGQLDLEDILVAIDDKP------KLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSG 188 (346)
T ss_pred -eEEEeccCC--CCCCCHHHHHHhcCCCC------CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcC
Confidence 999999975 46899999999764433 3788889999999999999999999987 999999999974332
Q ss_pred cCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC
Q 037144 278 ICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR 356 (502)
Q Consensus 278 ~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr 356 (502)
. .......... ..+.+..+++|+++.| ..+|+++.+ +..+. .+...... ++
T Consensus 189 ~-~~~~~~~~~~-~~~i~~~S~sK~~g~~G~r~G~~~~~-~~~~~-~~~~~~~~-------------------~~----- 240 (346)
T TIGR01141 189 E-PSTLPLLAEY-PNLIVLRTLSKAFGLAGLRIGYAIAN-AEIID-ALNKVRAP-------------------FN----- 240 (346)
T ss_pred C-ccHHHHHhhC-CCEEEEehhhHhhhchhhhceeeecC-HHHHH-HHHhccCC-------------------CC-----
Confidence 1 1111112211 2235567889999644 457888764 33322 22111000 00
Q ss_pred CCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccc
Q 037144 357 RFRSLKLWVVIRNFGV-ANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQY 435 (502)
Q Consensus 357 ~~~al~~~~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 435 (502)
...+....+...+.. ..+.+..++..++++++.+.|++++++++. ++...++++.+.. .
T Consensus 241 -~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~-~----------------- 300 (346)
T TIGR01141 241 -LSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFPR-D----------------- 300 (346)
T ss_pred -CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecCC-C-----------------
Confidence 012222333333322 247778888899999999999988888864 4455566665532 1
Q ss_pred cccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECC-EEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144 436 RQFSEEERTNEFNRELLESINVSGKVFMTHAIVGG-IYVLRFAAGNSMTMESHVRAAWTVVQ 496 (502)
Q Consensus 436 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g-~~~lR~~~~~~~t~~~di~~~~~~l~ 496 (502)
.+++.++|.+.|..+.+...+.+ ..++|++++ +++++++++++|+
T Consensus 301 ------------~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~----~~~~i~~~~~~l~ 346 (346)
T TIGR01141 301 ------------ADALFEALLEKGIIVRDLNSYPGLPNCLRITVG----TREENDRFLAALR 346 (346)
T ss_pred ------------HHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC----CHHHHHHHHHHhC
Confidence 24667777777865444332322 578999975 5679999998773
No 122
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.85 E-value=6.3e-19 Score=179.36 Aligned_cols=305 Identities=12% Similarity=0.069 Sum_probs=197.6
Q ss_pred hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHH--HHHHhCcc-CCCCeEEEeCCCCchhHHH
Q 037144 114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDR--VLKKIGRE-NISKLVVYSSDQTHCAFQK 190 (502)
Q Consensus 114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~--~~~~~~~~-~~~~~~v~~s~~~H~s~~~ 190 (502)
.+.+..++.+.|++++|.+. .++.++|..||+.++.+.... .+...+.. ..+++.|++....|.|+..
T Consensus 145 ~~~~h~~LE~~LA~f~g~e~---------all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~d 215 (476)
T PLN02955 145 YTTYHRLLESSLADLKKKED---------CLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIID 215 (476)
T ss_pred ChHHHHHHHHHHHHHHCCCc---------EEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHH
Confidence 34555666777899999875 588888999997776654210 00000000 0146788899999999999
Q ss_pred HHHHcCC-CCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEee
Q 037144 191 AAQIVGI-DRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVD 269 (502)
Q Consensus 191 aa~~~Gl-g~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVD 269 (502)
++++... |..+++.++. .|+++|+++|+.... ...+|+.....++.|.+-|+++|.++|++||++++||
T Consensus 216 G~~ls~~~~~a~~~~f~H-------ND~~~Le~~L~~~~~---~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVD 285 (476)
T PLN02955 216 GVRLAERQGNVEVFVYRH-------CDMYHLNSLLSSCKM---KRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVID 285 (476)
T ss_pred HHHhccccCCceEEEeCC-------CCHHHHHHHHHhCCC---CceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEc
Confidence 9998732 1116777764 389999999976432 2346777778999999999999999999999999999
Q ss_pred cccccccccCccchhhhc--C-CCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhh-cCCcccccCccCCCCCccccc
Q 037144 270 AAYAGSACICPEFRHFID--G-VECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTL-STNPQYLKNEATDQEPKEQEV 345 (502)
Q Consensus 270 aA~g~~~~~~~~~~~~~~--~-~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~ 345 (502)
.||+.+.+- +..+.... + ....|.++.++.|.++.. .|+++.+ +... +.+ .....|++.....
T Consensus 286 EAH~~Gv~G-~~G~G~~e~~g~~~di~ii~~TLsKA~G~~--GGfi~gs-~~~~-~~l~~~~~~~ifStalp-------- 352 (476)
T PLN02955 286 DAHGTFVCG-ENGGGVAEEFNCEADVDLCVGTLSKAAGCH--GGFIACS-KKWK-QLIQSRGRSFIFSTAIP-------- 352 (476)
T ss_pred ccccCceec-CCCCcHHHHhCCCCCCcEEEEeCccchhcc--CceeecH-HHHH-HHHHHhCCCCeeccccc--------
Confidence 999876653 22222211 1 247889999999998654 3444443 3332 232 2344455432110
Q ss_pred CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhh
Q 037144 346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRT 425 (502)
Q Consensus 346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~ 425 (502)
+..+.+..++++.+-.+ ..+.+++.++.++|++.+ |+.+ .++++.+.+..
T Consensus 353 -----------p~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~~----G~~~----~sPI~pI~ig~--------- 402 (476)
T PLN02955 353 -----------VPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKALS----GVDI----SSPIISLVVGN--------- 402 (476)
T ss_pred -----------HHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhc----CCCC----CCCEEEEEeCC---------
Confidence 01122233344443221 246677888888888742 5543 36677766643
Q ss_pred cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEE---EEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVF---MTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
+.....+.++|.++|..+ ..|++..+...+|++++..||.+ ||++++++|.++.+
T Consensus 403 -------------------~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~e-dId~lv~~L~~~~~ 460 (476)
T PLN02955 403 -------------------QEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTE-DVKKLITALSSCLD 460 (476)
T ss_pred -------------------HHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHH-HHHHHHHHHHHHHh
Confidence 233557788888889742 23444467778999998766655 99999999988754
No 123
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.85 E-value=8e-19 Score=180.78 Aligned_cols=298 Identities=12% Similarity=0.076 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
....++.+.+++++|.+ ..++.++|++||..++..++.. .++.+|+.+...|.++...++..
T Consensus 91 ~~~~~l~~~la~~~g~~---------~~~~~~sG~~an~~ai~~l~~~---------~~~~~i~~~~~~h~s~~~~~~~~ 152 (407)
T PRK09064 91 HYHVELERELADLHGKE---------AALVFTSGYVSNDATLSTLAKL---------IPDCVIFSDELNHASMIEGIRRS 152 (407)
T ss_pred HHHHHHHHHHHHHhCCC---------cEEEECcHHHHHHHHHHHHhCC---------CCCCEEEEeCcchHHHHHHHHHc
Confidence 33445556677888853 2567777889998887766431 14567777777899998888888
Q ss_pred CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccc
Q 037144 196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS 275 (502)
Q Consensus 196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~ 275 (502)
|. .++.++. .|+++|++.++... ...+.+|+++.+.+++|.+.|+++|.++|++||++++||+||+.+
T Consensus 153 ~~---~~~~~~~-------~d~~~le~~l~~~~--~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G 220 (407)
T PRK09064 153 RC---EKHIFRH-------NDVAHLEELLAAAD--PDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVG 220 (407)
T ss_pred CC---cEEEECC-------CCHHHHHHHHHhcc--CCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCccc
Confidence 87 7766653 37889999886421 123558888899999999999999999999999999999999744
Q ss_pred cccCccchhh--hcC-CCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc
Q 037144 276 ACICPEFRHF--IDG-VECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI 352 (502)
Q Consensus 276 ~~~~~~~~~~--~~~-~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~ 352 (502)
.+ .+..... ..+ .+..|.++.+++|.++.+. |+++. ++...........+|...
T Consensus 221 ~~-g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G--G~~~~-~~~~~~~l~~~~~~~~~t------------------- 277 (407)
T PRK09064 221 MY-GPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG--GYIAG-SAALVDAVRSYAPGFIFT------------------- 277 (407)
T ss_pred cc-CCCCCChHHhcCCCCCCeEEEEecchhhhccC--ceEec-CHHHHHHHHHhCcccccc-------------------
Confidence 32 1211111 112 2356888889999987542 55544 333322111111222211
Q ss_pred cCCC-CCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCC
Q 037144 353 TLCR-RFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGT 431 (502)
Q Consensus 353 ~~sr-~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~ 431 (502)
.+. +..+..+..+++.+... ....++..++++++.+.|++. |++++ ++..+++.+.+..
T Consensus 278 -~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~iv~i~~~~--------------- 337 (407)
T PRK09064 278 -TSLPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAA-GIPVM-PNESHIVPVMVGD--------------- 337 (407)
T ss_pred -CcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC---------------
Confidence 111 11223344555544222 334677889999999999986 78766 3456676665532
Q ss_pred cccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeee----ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 432 YDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAI----VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~----~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.....++.++|.++ |.+ +.+.. ..+..++|++++. ..+++|++++++.|+++.++
T Consensus 338 -------------~~~~~~l~~~L~~~~gi~-v~~~~~p~~~~~~~~lRis~~~-~~t~edi~~l~~~l~~~~~~ 397 (407)
T PRK09064 338 -------------PEKCKKASDMLLEEHGIY-VQPINYPTVPRGTERLRITPTP-FHTDEMIDHLVEALVEVWAR 397 (407)
T ss_pred -------------HHHHHHHHHHHHHhCCEE-EeeECCCCCCCCCceEEEEeCC-CCCHHHHHHHHHHHHHHHHH
Confidence 11235667777654 654 43321 1244689999864 45667999999999988764
No 124
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.85 E-value=5.7e-19 Score=184.75 Aligned_cols=322 Identities=13% Similarity=0.099 Sum_probs=208.7
Q ss_pred cccChhhHHHHHHHHHHHHHhcC----CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCC
Q 037144 108 WISSPAAVELENIVMDWLGQMLD----LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQ 183 (502)
Q Consensus 108 ~~~~p~~~~le~~~~~~l~~l~g----~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~ 183 (502)
|....+..++.+++++|+.+.+| ++.+ ..++|+|+++++...+.+..+ +++.|+++.+
T Consensus 90 y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe-------~Ivit~Ga~~al~~l~~~l~~-----------pGD~Vlv~~P 151 (496)
T PLN02376 90 FQDYHGLKKFRQAIAHFMGKARGGKVTFDPE-------RVVMSGGATGANETIMFCLAD-----------PGDVFLIPSP 151 (496)
T ss_pred cCCCCCcHHHHHHHHHHHHHHhCCCCcCChh-------hEEEccchHHHHHHHHHHhCC-----------CCCEEEECCC
Confidence 44455668899999999999888 3433 689999999998777665543 7788999999
Q ss_pred CchhHHHHHH-HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHH
Q 037144 184 THCAFQKAAQ-IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVA 259 (502)
Q Consensus 184 ~H~s~~~aa~-~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~ 259 (502)
.|..+...+. ..|+ +++.||++.++++.+|+++++++++...+.+.++.+|+++.++|+||.+-+ +++|+++|
T Consensus 152 ~Y~~~~~~~~~~~G~---~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a 228 (496)
T PLN02376 152 YYAAFDRDLRWRTGV---EIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFV 228 (496)
T ss_pred CccchHHHHHhhCCC---EEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHH
Confidence 9999988777 4899 999999975456899999999988655444445667888899999999965 66788899
Q ss_pred HHhCCEEEeecccccccccCccchh---hhcC--CC--CCC--eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcc
Q 037144 260 KQFGIWVHVDAAYAGSACICPEFRH---FIDG--VE--CVD--SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQ 329 (502)
Q Consensus 260 ~~~g~~lhVDaA~g~~~~~~~~~~~---~~~~--~~--~aD--si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~ 329 (502)
++||+++++|.+|+...+..+.+.. .... .. ..+ .++.+++|.++ ....+|+++..++... ........
T Consensus 229 ~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~-~~~~~~~~ 307 (496)
T PLN02376 229 TRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVV-SCARKMSS 307 (496)
T ss_pred HHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHH-HHHHHHhh
Confidence 9999999999999876543322211 1111 00 112 23568999996 5577898887655432 22211111
Q ss_pred cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHH-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 037144 330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVA-----NLRNFIRSHVGMAKLFERLVTSDKRFEVAFP 404 (502)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~-----g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~ 404 (502)
+.. ...+..+++...+... -+.+..+++.+..+.+.+.|++. +++++ +
T Consensus 308 ~~~-------------------------vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~-~ 360 (496)
T PLN02376 308 FGL-------------------------VSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACL-T 360 (496)
T ss_pred cCC-------------------------CCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-C
Confidence 100 0223333333333222 23334566677778888888876 77765 4
Q ss_pred CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC--CEEEEEEEecCC
Q 037144 405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--GIYVLRFAAGNS 481 (502)
Q Consensus 405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lR~~~~~~ 481 (502)
+..++++|.-.+.... + ....+...++.+.+.++ |..+.++..+. +.+++|+++++
T Consensus 361 ~~aG~flwi~l~~~~~-------------------~-~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~- 419 (496)
T PLN02376 361 SNAGLFAWMDLRHLLR-------------------D-RNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN- 419 (496)
T ss_pred CCceEEEEEEchhhhc-------------------c-CCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC-
Confidence 5555555543332110 0 00001123566666665 65444444442 35799999975
Q ss_pred CCcHHHHHHHHHHHHHHHH
Q 037144 482 MTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 482 ~t~~~di~~~~~~l~~~~~ 500 (502)
.+++.++.+++.|.++..
T Consensus 420 -~~~~~l~~al~rl~~~l~ 437 (496)
T PLN02376 420 -MDDDTLHVALGRIQDFVS 437 (496)
T ss_pred -CCHHHHHHHHHHHHHHHH
Confidence 345789999999888764
No 125
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.85 E-value=1e-18 Score=178.44 Aligned_cols=326 Identities=12% Similarity=0.104 Sum_probs=210.1
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+.++.+++.... .....|....+..++++.+++|+.+.+|++-.. ...++|+|+++++..++.+...
T Consensus 45 ~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-----~~i~it~G~~~al~~~~~~~~~------- 111 (384)
T PRK06348 45 ESIINAAFEDAK-KGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKR-----NEIMATVGACHGMYLALQSILD------- 111 (384)
T ss_pred HHHHHHHHHHHh-cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCh-----hhEEEcCChHHHHHHHHHHhcC-------
Confidence 444444444332 223456655666789999999998887764321 2689999999988777665543
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|+++.+.|..+..+++.+|. .++.+|+++++++.+|+++|++++++.+ .+|+++.++|+||.+
T Consensus 112 ----~gd~vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~ 178 (384)
T PRK06348 112 ----PGDEVIIHEPYFTPYKDQIEMVGG---KPIILETYEEDGFQINVKKLEALITSKT------KAIILNSPNNPTGAV 178 (384)
T ss_pred ----CCCEEEEeCCCCcchHHHHHHcCC---EEEEecCCcCcCCcCCHHHHHHhhCcCc------cEEEEeCCCCCCCcC
Confidence 677888999999999999999999 8999987544457899999999886433 266677899999998
Q ss_pred C---ChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhh
Q 037144 250 D---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLST 323 (502)
Q Consensus 250 d---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~ 323 (502)
- .+++|.++|++||+++++|.+|+...... ..... +.+...-..+..++.|.++ ....+|+++.. +.. ...
T Consensus 179 ~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~-~~~-~~~ 255 (384)
T PRK06348 179 FSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAP-DYI-IET 255 (384)
T ss_pred CCHHHHHHHHHHHHHCCeEEEEecccccceeCC-CccchhhcCCCcCcEEEEecchhccCCccccceeeecC-HHH-HHH
Confidence 5 47888899999999999999998765432 11111 1111122355567999997 55667887764 322 222
Q ss_pred hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
+.....+... + ...+...++...+ ..+.++++.+.+.++++++.+.|++++++++
T Consensus 256 ~~~~~~~~~~--------------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~ 312 (384)
T PRK06348 256 AKIINEGICF--------------------S---APTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSL 312 (384)
T ss_pred HHHHHHhccC--------------------C---CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCcee
Confidence 2111110000 0 0122222222222 2344566777778888899999988877776
Q ss_pred ecCCCeeEEEEEeec-CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEEEEEE
Q 037144 402 AFPRNFSLVCFRVTP-SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYVLRFA 477 (502)
Q Consensus 402 ~~~~~~~~v~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~~ 477 (502)
. +|+.++++|.-.+ ... + ..++.+.+.+ .|..+.++..+. +..++|++
T Consensus 313 ~-~p~gg~~~~~~~~~~~~-------------------------~--~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~ 364 (384)
T PRK06348 313 H-PPKGSIYAFINIKKTGL-------------------------S--SVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLA 364 (384)
T ss_pred c-cCCeeEEEEEecccCCC-------------------------C--HHHHHHHHHHhCCEEEcCchhhccCCCCeEEEE
Confidence 5 5666666543322 111 0 2345666553 476555444443 35799999
Q ss_pred ecCCCCcHHHHHHHHHHHHHH
Q 037144 478 AGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 478 ~~~~~t~~~di~~~~~~l~~~ 498 (502)
++ .++++++.+++.|+++
T Consensus 365 ~~---~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 365 CT---VGIEVLEEAFNRIEKM 382 (384)
T ss_pred ec---CCHHHHHHHHHHHHhh
Confidence 85 3567899999888764
No 126
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.85 E-value=2.4e-18 Score=176.37 Aligned_cols=313 Identities=12% Similarity=0.087 Sum_probs=198.3
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144 106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH 185 (502)
Q Consensus 106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (502)
..|....+..++++++++|+.+.+|.+-+. ....++|+|+++++..++.+..+ +++.|+++.++|
T Consensus 67 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~----~~~i~vt~G~~~al~~~~~~~~~-----------~gd~Vlv~~P~y 131 (394)
T PRK05942 67 HGYPPFEGTASFRQAITDWYHRRYGVELDP----DSEALPLLGSKEGLTHLALAYVN-----------PGDVVLVPSPAY 131 (394)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHCCCcCC----CCeEEEccChHHHHHHHHHHhCC-----------CCCEEEEcCCCC
Confidence 456555567889999999999988864221 01367889999988776655432 678899999999
Q ss_pred hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHh
Q 037144 186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQF 262 (502)
Q Consensus 186 ~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~ 262 (502)
..+...+...|+ +++.+|++.++++.+|+++|++++.+.+ .+|+++.++|+||.+-+ +++|.++|++|
T Consensus 132 ~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~ 202 (394)
T PRK05942 132 PAHFRGPLIAGA---QIYPIILKPENDWLIDLSSIPEEVAQQA------KILYFNYPSNPTTATAPREFFEEIVAFARKY 202 (394)
T ss_pred cchHHHHHHcCC---EEEEeecCCccCCccCHHHHHHhccccc------eEEEEcCCCCCCCCcCCHHHHHHHHHHHHHc
Confidence 988888888999 9999999765557899999999886533 37788889999999976 88999999999
Q ss_pred CCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCC
Q 037144 263 GIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE 339 (502)
Q Consensus 263 g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 339 (502)
|+++++|.+|+.+.......... +.+.........++.|.++ .+..+|+++. ++.... .+.....+...
T Consensus 203 ~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~-~~~l~~-~l~~~~~~~~~------ 274 (394)
T PRK05942 203 EIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVG-NRHIIQ-GLRTLKTNLDY------ 274 (394)
T ss_pred CeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeec-CHHHHH-HHHHHHhhccc------
Confidence 99999999997654321111111 1111122344567889885 4556888875 333322 22111111100
Q ss_pred CcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEE-EEeecCc
Q 037144 340 PKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVC-FRVTPSA 418 (502)
Q Consensus 340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~-f~~~~~~ 418 (502)
+. + ......+-.+++ ...+.+++..+++.++.+++.+.|++. ++++. ++..+++. +.+++ .
T Consensus 275 -----------~~--~-~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~~~~~~f~~~~~~~-~ 336 (394)
T PRK05942 275 -----------GI--F-SALQKAAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIP-PTKATMYLWVPCPV-G 336 (394)
T ss_pred -----------CC--C-HHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCeeeEEEEECCC-C
Confidence 00 0 001111222222 234566777788888899999999887 67765 55666544 44432 1
Q ss_pred chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHH-HhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144 419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESI-NVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVV 495 (502)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l 495 (502)
. + ..++..++ .+.|..+..+..+. +..++|+++. .+.+.+...++.|
T Consensus 337 ~-------------------------~--~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~---~~~~~l~~~l~~l 386 (394)
T PRK05942 337 M-------------------------G--STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI---ADCDRLGEALDRL 386 (394)
T ss_pred C-------------------------C--HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec---CCHHHHHHHHHHH
Confidence 1 0 12334433 34576554444442 3579999986 2344566666665
Q ss_pred HHH
Q 037144 496 QEH 498 (502)
Q Consensus 496 ~~~ 498 (502)
.+.
T Consensus 387 ~~~ 389 (394)
T PRK05942 387 KQA 389 (394)
T ss_pred HHh
Confidence 543
No 127
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.84 E-value=1.7e-18 Score=176.97 Aligned_cols=326 Identities=13% Similarity=0.089 Sum_probs=206.8
Q ss_pred HHHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 90 AGIVGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 90 ~~~~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
+..+.+.+...+. .....|....+..++.+.+++|+.+.+|.+... ....++|+|+++++...+.+..+
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~----~~~vi~t~G~~~~l~~~~~~~~~------ 113 (383)
T TIGR03540 44 PKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDP----ETEVLSLIGSKEGIAHIPLAFVN------ 113 (383)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC----CCeEEECCCcHHHHHHHHHHhCC------
Confidence 4445555554432 223456555566889999999999888874221 01467888988888766554432
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|+++..++..+..+++.+|. +++.+|++.++++.+|+++|++++.++ +.+|+++.++|+||.
T Consensus 114 -----~gd~vlv~~P~y~~~~~~~~~~G~---~v~~v~~~~~~g~~~d~~~l~~~~~~~------~~~v~i~~P~NPtG~ 179 (383)
T TIGR03540 114 -----PGDIVLVPDPGYPVYRIGTLFAGG---EPYEMPLKEENGFLPDFDAIPEDIAKK------AKLMFINYPNNPTGA 179 (383)
T ss_pred -----CCCEEEEeCCCCcchHHHHHhcCC---EEEEEecCcccCCccCHHHHHhhcccc------ceEEEEeCCCCCcCc
Confidence 678899999999888889999999 999999975445778999999988643 337778889999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhh
Q 037144 249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLS 322 (502)
Q Consensus 249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~ 322 (502)
+-+ +++|+++|++||+++++|.+|+............ +.+...-..+..++.|.++.| ..+|+++. ++....
T Consensus 180 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~-~~~l~~- 257 (383)
T TIGR03540 180 VAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG-NADLIA- 257 (383)
T ss_pred cCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeC-CHHHHH-
Confidence 976 7899999999999999999997554321111111 111112235567789999644 45777754 443332
Q ss_pred hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144 323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFE 400 (502)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~ 400 (502)
.+.....+... ....+...++...+ +.+.+++..+.+.++++.+.+.|++. ++.
T Consensus 258 ~~~~~~~~~~~-----------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~ 313 (383)
T TIGR03540 258 GLGKVKTNVDS-----------------------GVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKI-GID 313 (383)
T ss_pred HHHHHHHhccc-----------------------CCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCE
Confidence 22111001000 00111122222222 45667777888889999999999987 788
Q ss_pred EecCCCeeEE-EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEE
Q 037144 401 VAFPRNFSLV-CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRF 476 (502)
Q Consensus 401 l~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~ 476 (502)
+. ++..+.+ ++.++ ... ...++.+++. +.|..+.++..+. +..++|+
T Consensus 314 ~~-~~~~~~~~~~~l~-~~~---------------------------~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ri 364 (383)
T TIGR03540 314 VE-KPKATFYVWVPVP-EGY---------------------------TSAEFAARLLEETGVVVTPGVGFGEYGEGYIRI 364 (383)
T ss_pred ec-CCCcceEEEEECC-CCC---------------------------CHHHHHHHHHHHCCEEEecchhhCccCCCeEEE
Confidence 76 4444554 44443 221 0235666654 4566554443332 3468999
Q ss_pred EecCCCCcHHHHHHHHHHHHH
Q 037144 477 AAGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 477 ~~~~~~t~~~di~~~~~~l~~ 497 (502)
+++. ++++++++++.|.+
T Consensus 365 s~~~---~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 365 SLTV---PDERLEEAVARIKK 382 (383)
T ss_pred EecC---CHHHHHHHHHHHhh
Confidence 9962 46688888877654
No 128
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.84 E-value=2.9e-19 Score=181.25 Aligned_cols=317 Identities=15% Similarity=0.123 Sum_probs=210.0
Q ss_pred CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC
Q 037144 105 GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT 184 (502)
Q Consensus 105 ~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 184 (502)
...|....+..++++.+.+|+.+-.|.+.+. ...+++++|+.+++..+...... .+++.|++..+.
T Consensus 37 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~~i~~~~G~~~~~~~~~~~~~~---------~~~~~vlv~~P~ 102 (363)
T PF00155_consen 37 FLGYPPPQGYPELREAIADFLGRRYGVPVDP-----EANILVTSGAQAALFLLLRLLKI---------NPGDTVLVPDPC 102 (363)
T ss_dssp CTSSTCTTHHHHHHHHHHHHHHHHHTHHTTG-----GEGEEEESHHHHHHHHHHHHHHS---------STTSEEEEEESS
T ss_pred cccCCCchhhHHHHHHHHHHhhhccCccccc-----ceEEEEecccccchhhhhhcccc---------cccccceecCCc
Confidence 4467777778999999999998766664432 11355555555555554444320 156788899999
Q ss_pred chhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChh---HHHHHHHH
Q 037144 185 HCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLK---PLCDVAKQ 261 (502)
Q Consensus 185 H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~---eI~~i~~~ 261 (502)
|..+...++..|+ .++.+|++..+++.+|+++|++.+++...++..+.+|+++.++++||..-+.+ +|+++|++
T Consensus 103 y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~ 179 (363)
T PF00155_consen 103 YPSYIEAARLLGA---EVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELARE 179 (363)
T ss_dssp STHHHHHHHHTTS---EEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHH
T ss_pred cccccccccccCc---eeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcc
Confidence 9999999999999 99999986555789999999999988655443456788899999999985554 55555999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCC-CCC-eeEEccCCcCCCC-CcceEEEeeCchhhhhhhcC-CcccccCccCC
Q 037144 262 FGIWVHVDAAYAGSACICPEFRHFIDGVE-CVD-SFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLST-NPQYLKNEATD 337 (502)
Q Consensus 262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~aD-si~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~ 337 (502)
||+++++|.+|+.+....+........+. ..+ .++.+++|.++.| ...|++++ ++.... .+.. ...+...
T Consensus 180 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~-~~~~~~-~l~~~~~~~~~~---- 253 (363)
T PF00155_consen 180 YNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVA-PPELIE-RLRRFQRSGLSS---- 253 (363)
T ss_dssp TTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEE-EHHHHH-HHHHHHHHTTSS----
T ss_pred cccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccc-hhhhhh-hhhhcccccccc----
Confidence 99999999999887665332211111111 223 6777899998766 46788877 443322 2211 1111100
Q ss_pred CCCcccccCCCcccccCCCCCCchHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEee
Q 037144 338 QEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG--VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT 415 (502)
Q Consensus 338 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~ 415 (502)
......+...+...+ .+.++++.+++.++++++.+.|++. ++.+..++ .++++|...
T Consensus 254 -------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~-~~~~~~~~~ 312 (363)
T PF00155_consen 254 -------------------SPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPE-AGFFLWVRL 312 (363)
T ss_dssp -------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHS-BSSEEEEEE
T ss_pred -------------------chhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeecc-CccEEEEEc
Confidence 001112222232222 2267889999999999999999988 89988544 677776554
Q ss_pred cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHH
Q 037144 416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTV 494 (502)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~ 494 (502)
+. . ...++.++|.++ |..+.++..+....++|++++ . .+++++++++++
T Consensus 313 ~~---------------------------~-~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a-~-~~~e~~~~~~~~ 362 (363)
T PF00155_consen 313 DP---------------------------N-DAEELAQELLEEYGILVRPGSYFGVPGYIRISLA-S-HSEEDLEEALER 362 (363)
T ss_dssp SH---------------------------H-HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGG-C-SCHHHHHHHHHH
T ss_pred cc---------------------------c-hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEec-c-CCHHHHHHHHhh
Confidence 32 1 245677778887 876555444444679999983 2 466799999987
Q ss_pred H
Q 037144 495 V 495 (502)
Q Consensus 495 l 495 (502)
|
T Consensus 363 l 363 (363)
T PF00155_consen 363 L 363 (363)
T ss_dssp H
T ss_pred C
Confidence 5
No 129
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.84 E-value=3e-18 Score=176.03 Aligned_cols=330 Identities=14% Similarity=0.097 Sum_probs=204.1
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
|..+.+.+....+ ....|....+..++.+.+.+++.. .|.+... ...++|+|+++++..++.....
T Consensus 45 ~~~~~~a~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~~-----~~i~~t~G~~~al~~~~~~l~~------- 110 (397)
T PRK07568 45 PEVFFEAIKNYDE-EVLAYSHSQGIPELREAFAKYYKK-WGIDVEP-----DEILITNGGSEAILFAMMAICD------- 110 (397)
T ss_pred CHHHHHHHHHHhc-CCcCcCCCCCCHHHHHHHHHHHHH-hCCCCCc-----ceEEEcCChHHHHHHHHHHhcC-------
Confidence 4455555554433 233455555677888888888763 4442211 2688999999998776654422
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcc-cCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYG-LSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~-~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|+++.+.|..+...++..|+ +++.++++.++++. .++++|++++++.+ .+|+++.++|+||.
T Consensus 111 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~~~~~~l~~~~~~~~------~~v~i~~p~NPtG~ 177 (397)
T PRK07568 111 ----PGDEILVPEPFYANYNGFATSAGV---KIVPVTTKIEEGFHLPSKEEIEKLITPKT------KAILISNPGNPTGV 177 (397)
T ss_pred ----CCCEEEEecCCCccHHHHHHHcCC---EEEEeecCcccCCCCCCHHHHHHhcCccc------eEEEEECCCCCCCc
Confidence 567788887777777777888999 99999986433334 36899998886543 37788889999999
Q ss_pred cC---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCC-CC--eeEEccCCcCCC-CCcceEEEeeCchhhh
Q 037144 249 VD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEC-VD--SFSFNPHKWLFT-TLDCCCLWVKDPSCLL 321 (502)
Q Consensus 249 id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~-aD--si~~~~hK~l~~-p~~~g~~~~r~~~~l~ 321 (502)
+- ++++|+++|+++|+++++|.+|+.+....+...... .+.. .+ .+..+++|.++. ...+|+++..++....
T Consensus 178 ~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~-~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~ 256 (397)
T PRK07568 178 VYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSAL-SLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIA 256 (397)
T ss_pred cCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChh-hcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHH
Confidence 86 478999999999999999999987643221111111 1111 22 455679999874 5668888775554432
Q ss_pred hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 037144 322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRF 399 (502)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~ 399 (502)
.........+ ....+...++...+ +.+.+++..+.+.+.++.+.+.|++++++
T Consensus 257 ~~~~~~~~~~-------------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 311 (397)
T PRK07568 257 AAMKLCQARL-------------------------SPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGV 311 (397)
T ss_pred HHHHHhhccC-------------------------CCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 2211110000 00122222222222 45667778888889999999999988777
Q ss_pred EEecCCCeeEE-EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH--hcCcEEEEeeeEC-----CE
Q 037144 400 EVAFPRNFSLV-CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN--VSGKVFMTHAIVG-----GI 471 (502)
Q Consensus 400 ~l~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--~~g~~~~~~~~~~-----g~ 471 (502)
.+. +|..+++ +++++... ..++.+.+.++.. +.|..+.++..+. +.
T Consensus 312 ~~~-~p~g~~~~~~~l~~~~-------------------------~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~ 365 (397)
T PRK07568 312 VCE-KPKGAFYIIAKLPVDD-------------------------AEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGK 365 (397)
T ss_pred eec-CCCcceEEEEecCCCC-------------------------HHHHHHHHHhhcccccceEEEeCchHhcCCCCCCC
Confidence 655 4555554 34443210 0223333332211 1365544443331 24
Q ss_pred EEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 472 YVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 472 ~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.++|++++. ++++++++++.|.++.++
T Consensus 366 ~~iRls~~~---~~~~~~~~~~~l~~~l~~ 392 (397)
T PRK07568 366 NEIRIAYVL---NEEDLKRAMEILKEALEK 392 (397)
T ss_pred CeEEEEEeC---CHHHHHHHHHHHHHHHHH
Confidence 699999862 457999999999887654
No 130
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.84 E-value=1.2e-18 Score=178.92 Aligned_cols=342 Identities=9% Similarity=0.020 Sum_probs=214.1
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+......|....+..++.+.+.+++++.+|.+... ...++|+|+++|+..++.+...
T Consensus 48 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~~~~------- 115 (402)
T PRK06107 48 PDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYAD-----NEITVGGGAKQAIFLALMATLE------- 115 (402)
T ss_pred CHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEeCCHHHHHHHHHHHhcC-------
Confidence 3445666666554433456655567889999999999998874321 2689999999998777654322
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|++++..+..+..++...|. .++.++++.++++.+|+++|++++.+. +.+|+++.++|+||.+
T Consensus 116 ----~gd~vl~~~p~y~~y~~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~ 182 (402)
T PRK06107 116 ----AGDEVIIPAPYWVSYPDMVLANDG---TPVIVACPEEQGFKLTPEALEAAITPR------TRWLILNAPSNPTGAV 182 (402)
T ss_pred ----CCCEEEEecCCCcCHHHHHHHcCC---EEEEecCCcccCCCCCHHHHHhhcCcC------ceEEEEECCCCCCCcC
Confidence 677888888888777777777887 788888864445789999999988543 3367788899999988
Q ss_pred CC---hhHHHHHHHHh-CCEEEeecccccccccCccchhhh---cCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhh
Q 037144 250 DP---LKPLCDVAKQF-GIWVHVDAAYAGSACICPEFRHFI---DGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLL 321 (502)
Q Consensus 250 dp---l~eI~~i~~~~-g~~lhVDaA~g~~~~~~~~~~~~~---~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~ 321 (502)
-+ +++|+++|+++ |+++++|.+|+...+..+...... .+...--.+..+++|.++ ....+|+++.. +...
T Consensus 183 ~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~-~~~~- 260 (402)
T PRK06107 183 YSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGP-ADLI- 260 (402)
T ss_pred cCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecC-HHHH-
Confidence 54 67778889998 999999999975433221111111 111111234456799997 44557877653 3332
Q ss_pred hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 037144 322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRF 399 (502)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~ 399 (502)
+.+.....+... ....+..+++.+.+ +...+++..+.+.++++.+.+.|++++++
T Consensus 261 ~~~~~~~~~~~~-----------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~ 317 (402)
T PRK06107 261 AAINKLQSQSSS-----------------------CPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGL 317 (402)
T ss_pred HHHHHHHHhccc-----------------------CCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 222111111100 01223334444443 44566777788888899999999888787
Q ss_pred EEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEEEe
Q 037144 400 EVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRFAA 478 (502)
Q Consensus 400 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~ 478 (502)
++. +|+.+++.|...+.-... . .+.... ......+.+++. +.|.++.++..++...++|+++
T Consensus 318 ~~~-~p~gg~~~~~~~~~~~~~-----------~---~~~~~~--~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~ 380 (402)
T PRK06107 318 SCL-VPDGAFYLYVNCAGLIGK-----------T---TPEGKV--LETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSI 380 (402)
T ss_pred ccc-CCCcceEEeeeccccccc-----------c---cccccC--CCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEe
Confidence 765 556666555332110000 0 000000 001234454443 4577666555554457999999
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHh
Q 037144 479 GNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 479 ~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+. ++++++++++.|.++.++
T Consensus 381 ~~---~~e~l~~~l~~l~~~l~~ 400 (402)
T PRK06107 381 AT---SLETLEEACARIERAVAA 400 (402)
T ss_pred CC---CHHHHHHHHHHHHHHHHh
Confidence 84 577999999999988765
No 131
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.84 E-value=2e-18 Score=176.64 Aligned_cols=305 Identities=10% Similarity=0.043 Sum_probs=195.4
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch
Q 037144 107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC 186 (502)
Q Consensus 107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~ 186 (502)
.|....+...+..++.+++++++|.+. . ++.++|+++++.++.+... ++++|+++...|.
T Consensus 69 ~~~~~~g~~~l~~~l~~~l~~~~g~~~--------~-i~~~sG~~a~~~a~~~~~~-----------~gd~vi~~~~~~~ 128 (385)
T TIGR01825 69 AVRTIAGTLRLHEELEEKLAKFKKTEA--------A-LVFQSGFNTNQGVLSALLR-----------KGDIVLSDELNHA 128 (385)
T ss_pred ccCcccCCcHHHHHHHHHHHHHhCCCc--------E-EEECcHHHHHHHHHHHhCC-----------CCCEEEEEccccH
Confidence 344444557788889999999998643 2 4445558888877665533 5678888889999
Q ss_pred hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV 266 (502)
Q Consensus 187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l 266 (502)
++..++...|. .++.++ .+|++++++.+.+... .+..+|+.....+++|.+.|+++|.++|++||+|+
T Consensus 129 ~~~~~~~~~g~---~~~~~~-------~~d~~~l~~~l~~~~~--~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~l 196 (385)
T TIGR01825 129 SIIDGLRLTKA---TKKIYK-------HADMDDLDRVLRENPS--YGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVT 196 (385)
T ss_pred HHHHHHHhcCC---ceEEeC-------CCCHHHHHHHHHhhcc--CCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEE
Confidence 99888888887 766553 5789999998875431 12456777777899999999999999999999999
Q ss_pred EeecccccccccCccc--hhhhcCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcc
Q 037144 267 HVDAAYAGSACICPEF--RHFIDGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKE 342 (502)
Q Consensus 267 hVDaA~g~~~~~~~~~--~~~~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~ 342 (502)
++|++|+.+.+..... ...+ ++ .+.|.+..++||+++.+. |+++. ++.... .+.. ...|....
T Consensus 197 i~De~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~g--G~~~~-~~~~~~-~~~~~~~~~~~~~-------- 263 (385)
T TIGR01825 197 YVDDAHGSGVMGEAGRGTVHHF-GLEDKVDIQVGTLSKAIGVVG--GYAAG-HKELIE-YLKNRARPFLFST-------- 263 (385)
T ss_pred EEECcccccCcCCCCCccHhhc-CCCcCCcEEEEeccHHhhcCC--CEEec-CHHHHH-HHHHhCccccccC--------
Confidence 9999997654421110 0001 11 357788899999997542 55543 333322 2211 11121110
Q ss_pred cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhh
Q 037144 343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDK 422 (502)
Q Consensus 343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~ 422 (502)
.+......++..+++.+.. ..+..++..++++++.+.|+++ ++++. .+..+++.+...+.
T Consensus 264 -----------~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~----- 323 (385)
T TIGR01825 264 -----------AQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKL-GYDTG-GSETPITPVVIGDE----- 323 (385)
T ss_pred -----------CCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEECCH-----
Confidence 0000111233334443211 1346677778899999999887 78776 34445555554221
Q ss_pred hhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE----CCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 423 LRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV----GGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
.....+.+.|.++|.. +.+..+ .+..++|+++. ...++++|++++++|+++
T Consensus 324 -----------------------~~~~~~~~~L~~~gi~-v~~~~~~~~~~~~~~iRi~~~-~~~~~e~i~~~~~~l~~~ 378 (385)
T TIGR01825 324 -----------------------KAAQEFSRRLFDEGIF-AQSIVFPTVPRGTARIRNIPT-AEHTKDDLDQALDAYEKV 378 (385)
T ss_pred -----------------------HHHHHHHHHHHHCCcE-EcccCCCCCCCCCceEEEEEc-CCCCHHHHHHHHHHHHHH
Confidence 1134677777777764 333222 23468999875 446777999999999988
Q ss_pred HHh
Q 037144 499 LEA 501 (502)
Q Consensus 499 ~~~ 501 (502)
.++
T Consensus 379 ~~~ 381 (385)
T TIGR01825 379 GKE 381 (385)
T ss_pred HHH
Confidence 754
No 132
>PRK07550 hypothetical protein; Provisional
Probab=99.84 E-value=1.9e-18 Score=176.69 Aligned_cols=329 Identities=11% Similarity=0.021 Sum_probs=208.2
Q ss_pred HHHHHHHHHhhc-CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 90 AGIVGEMLSSGF-NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 90 ~~~~~~~l~~~~-n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
+..+.+.+...+ +.....|...++..++++.+++++.+..|..-.. ...++|+|+++++..++.+...
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~------ 112 (386)
T PRK07550 44 PPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISP-----EQVHITSGCNQAFWAAMVTLAG------ 112 (386)
T ss_pred CHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCc-----ceEEEecCcHHHHHHHHHHhcC------
Confidence 444555555443 2233446555678999999999999988864221 2688899988888666555432
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|+++...|..+...++..|+ +++.++++++.++.+|+++|++++++.+ .+|+++.++|+||.
T Consensus 113 -----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~l~~~~~~~~------~~v~~~~P~NPtG~ 178 (386)
T PRK07550 113 -----AGDEVILPLPWYFNHKMWLDMLGI---RPVYLPCDEGPGLLPDPAAAEALITPRT------RAIALVTPNNPTGV 178 (386)
T ss_pred -----CCCEEEEcCCCCcchHHHHHhcCC---EEEEEecCCCcCCCCCHHHHHHHhcccC------cEEEEeCCCCCCCc
Confidence 677899998888888888899999 9999999754457789999999997543 25667779999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CC-CeeEEccCCcCC-CCCcceEEEeeCchhhhh
Q 037144 249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-CV-DSFSFNPHKWLF-TTLDCCCLWVKDPSCLLS 322 (502)
Q Consensus 249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~a-Dsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~ 322 (502)
+-+ +++|+++|++||+++++|.+|+.+..........+.... .. ..+..+++|.++ .....|+++..+ ..+..
T Consensus 179 ~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~-~~~~~ 257 (386)
T PRK07550 179 VYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASP-ARIAE 257 (386)
T ss_pred ccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCH-HHHHH
Confidence 855 889999999999999999999765321111111111100 11 244678999997 445677777643 22221
Q ss_pred hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144 323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG--VANLRNFIRSHVGMAKLFERLVTSDKRFE 400 (502)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~la~~l~~~l~~~~~~~ 400 (502)
.. .+.... +. + ...+..+++.+.+. .+..++..++..++++++.+.|.+.+++.
T Consensus 258 ~~----~~~~~~----------------~~-~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 313 (386)
T PRK07550 258 IE----KFMDTV----------------AI-C---APRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWE 313 (386)
T ss_pred HH----HHHhhc----------------cc-C---CCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence 11 111100 00 0 01222333333322 34455666777888889999998876776
Q ss_pred EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEEE
Q 037144 401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRFA 477 (502)
Q Consensus 401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~ 477 (502)
+. +....++++++...+. ...++.+++. +.|..+.++..+. +..++|++
T Consensus 314 ~~-~~g~~~~~~~~~~~~~---------------------------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis 365 (386)
T PRK07550 314 LL-ASGAYFAYVRHPFPDR---------------------------PSREVARRLAKEAGILCLPGTMFGPGQEGYLRLA 365 (386)
T ss_pred eC-CCceEEEEecCCCCCC---------------------------CHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEE
Confidence 53 3333344444432111 0245666654 4576554443332 35689999
Q ss_pred ecCCCCcHHHHHHHHHHHHHH
Q 037144 478 AGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 478 ~~~~~t~~~di~~~~~~l~~~ 498 (502)
++. .++++++++++.|.+.
T Consensus 366 ~~~--~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 366 FAN--ADVAGIGELVERLRAF 384 (386)
T ss_pred eec--CCHHHHHHHHHHHHhh
Confidence 964 3577999999998875
No 133
>PRK08068 transaminase; Reviewed
Probab=99.84 E-value=2e-18 Score=176.68 Aligned_cols=323 Identities=11% Similarity=0.010 Sum_probs=207.0
Q ss_pred HHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCC-cEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 92 IVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNG-GGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 92 ~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
.+.+.+...++.. ...|...++..++.+++++|+.+.+|.+-.. . ..++|+|+++++..++.+...
T Consensus 49 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~-----~~~i~it~G~~~~l~~~~~~~~~------- 116 (389)
T PRK08068 49 HIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDP-----ETEVAILFGGKAGLVELPQCLMN------- 116 (389)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CccEEEcCCcHHHHHHHHHHhCC-------
Confidence 3455555555432 3356556677899999999998888864221 2 478899998888665544322
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|++..++|..+..+++..|+ +++.+|++.+.++.+|+++|++++.+.+ .+|+++.++|+||.+
T Consensus 117 ----~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~P~NPTG~~ 183 (389)
T PRK08068 117 ----PGDTILVPDPGYPDYLSGVALARA---QFETMPLIAENNFLPDYTKIPEEVAEKA------KLMYLNYPNNPTGAV 183 (389)
T ss_pred ----CCCEEEEcCCCCcchHHHHHhcCC---EEEEeecccccCCCCCHHHHHHhccccc------eEEEEECCCCCCCCc
Confidence 677888999999999999999999 9999999754457899999999885432 377788899999999
Q ss_pred CCh---hHHHHHHHHhCCEEEeecccccccccCccchhhhcCC--CCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhh
Q 037144 250 DPL---KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV--ECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLST 323 (502)
Q Consensus 250 dpl---~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~--~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~ 323 (502)
-+. ++|+++|++|++++++|.+|+................ ..-..++.++.|.++ ....+|+++. ++..+. .
T Consensus 184 ~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~l~~-~ 261 (389)
T PRK08068 184 ATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG-NESVIE-A 261 (389)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEec-CHHHHH-H
Confidence 665 6788889999999999999966433211111111111 112356678999996 4456788764 443332 2
Q ss_pred hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
+.....++.. + ..+....++...+ +.+.+++.++++.+.++++.+.|++. ++.+
T Consensus 262 l~~~~~~~~~---------------------~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~ 317 (389)
T PRK08068 262 INLLQDHLFV---------------------S--LFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI-GWEV 317 (389)
T ss_pred HHHHHhhccC---------------------C--CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcc
Confidence 2111111100 0 0111112222222 34667788888899999999999887 6765
Q ss_pred ecCCCeeEE-EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEEEEEE
Q 037144 402 AFPRNFSLV-CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYVLRFA 477 (502)
Q Consensus 402 ~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~~ 477 (502)
. +|..+++ ++.+++. . ...++.+.+.+ .|..+..+..+. +..++|++
T Consensus 318 ~-~~~g~~~~~v~~~~~-~---------------------------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~ 368 (389)
T PRK08068 318 D-APKGSFFAWMPVPKG-Y---------------------------TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVG 368 (389)
T ss_pred c-CCCeeEEEEEECCCC-C---------------------------CHHHHHHHHHHhCCEEEecchHhCccCCCeEEEE
Confidence 4 5666654 4444321 1 02456777765 476544443332 35699999
Q ss_pred ecCCCCcHHHHHHHHHHHHH
Q 037144 478 AGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 478 ~~~~~t~~~di~~~~~~l~~ 497 (502)
++ ++++.+..+++.|.+
T Consensus 369 ~~---~~~~~l~~al~~l~~ 385 (389)
T PRK08068 369 LL---TDEERLREAVERIGK 385 (389)
T ss_pred Ec---CCHHHHHHHHHHHHH
Confidence 96 245677777777655
No 134
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.84 E-value=2.1e-18 Score=177.54 Aligned_cols=298 Identities=10% Similarity=0.070 Sum_probs=190.4
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
....++.+.+++++|.+ ..+++++|++||..++...... .++.+|+++...|.++..+++..
T Consensus 90 ~~~~~le~~la~~~g~~---------~~~~~~SG~~An~~ai~~l~~~---------~~g~~I~~~~~~H~s~~~~~~~~ 151 (406)
T PRK13393 90 HYHVLLEAELADLHGKE---------AALLFTSGYVSNWAALSTLGSR---------LPGCVILSDELNHASMIEGIRHS 151 (406)
T ss_pred HHHHHHHHHHHHHhCCC---------cEEEeCCcHHHHHHHHHHhhcC---------CCCCEEEEccchhHHHHHHHHHc
Confidence 34555667788888864 3567777788998888743221 04567888888999999998888
Q ss_pred CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccc
Q 037144 196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS 275 (502)
Q Consensus 196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~ 275 (502)
|. +++.++. .|++++++.++... ...+.+|+++...+++|.+.|+++|.++|+++|++++||++|+.+
T Consensus 152 g~---~~~~~~~-------~d~~~l~~~l~~~~--~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g 219 (406)
T PRK13393 152 RA---EKRIFRH-------NDPADLERKLSDLD--PHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVG 219 (406)
T ss_pred CC---eEEEeCC-------CCHHHHHHHHHhcc--CCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCcccc
Confidence 87 7777764 37788888876431 123457888889999999999999999999999999999999744
Q ss_pred cccCccchhh--hcC-CCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc
Q 037144 276 ACICPEFRHF--IDG-VECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI 352 (502)
Q Consensus 276 ~~~~~~~~~~--~~~-~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~ 352 (502)
.+ .+..... ..+ .+..|.+..++.|.++.+. |+++. ++............|...
T Consensus 220 ~~-g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G--G~~~~-~~~~~~~l~~~~~~~~~t------------------- 276 (406)
T PRK13393 220 LY-GPRGGGIAEREGLADRLTIIEGTLAKAFGVMG--GYITG-SAALCDFIRSFASGFIFT------------------- 276 (406)
T ss_pred cc-CCCCCchhhhcCCCCCCeEEEEeCchhhcccC--ceeeC-CHHHHHHHHHhCcCceec-------------------
Confidence 42 1211111 111 2246777778999998653 55443 333322111111122211
Q ss_pred cCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCC
Q 037144 353 TLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGT 431 (502)
Q Consensus 353 ~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~ 431 (502)
.+.. ..+..+.++++.+...+ ...++..+++++|++.|++. +++++ ++..+++.+....
T Consensus 277 -~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~i~~v~~~~--------------- 336 (406)
T PRK13393 277 -TSLPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKA-GIPHL-PNPSHIVPVMVGD--------------- 336 (406)
T ss_pred -CccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCeEEEEeCC---------------
Confidence 1111 12234445555542222 23356678899999999886 77765 4556666664421
Q ss_pred cccccccchhHhhHHHHHHHHHHHHhc-CcEEEEee----eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 432 YDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHA----IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~----~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.....++.++|.++ |.+ +.+. ...+...+|+++. ...+++||++++++|+++.++
T Consensus 337 -------------~~~~~~l~~~L~~~~Gi~-v~~~~~p~~p~g~~~iRis~~-~~~t~edid~l~~~l~~~~~~ 396 (406)
T PRK13393 337 -------------PVLCKQISDELLDRYGIY-VQPINYPTVPRGTERLRITPS-PLHTDADIEHLVQALSEIWAR 396 (406)
T ss_pred -------------HHHHHHHHHHHHHhCCEE-EEeECCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHh
Confidence 11235677777764 754 3332 2235578999986 445677999999999988654
No 135
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.84 E-value=3.8e-18 Score=176.55 Aligned_cols=332 Identities=14% Similarity=0.101 Sum_probs=197.8
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC
Q 037144 93 VGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN 172 (502)
Q Consensus 93 ~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~ 172 (502)
+.+...+.+..+...|..+++..++++.+.+++ |.+ .+++|+||++|+..++.+..+
T Consensus 59 ~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~~----~~~---------~vv~t~ggt~A~~~~~~all~---------- 115 (460)
T PRK13238 59 MSDRQWAAMMRGDEAYAGSRSYYRLEDAVKDIF----GYP---------YTIPTHQGRAAEQILFPVLIK---------- 115 (460)
T ss_pred hhHHHHHHHHhCCcccCCCCCHHHHHHHHHHHh----CCC---------cEEECCCHHHHHHHHHHHhCC----------
Confidence 444444444344457888889999988765554 543 379999999999887766543
Q ss_pred CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCC------CC--cccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144 173 ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKS------SS--YGLSAESVLSQINLDVEAELIPLFLCATVGTT 244 (502)
Q Consensus 173 ~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~------~~--~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt 244 (502)
+++ |+++...+.+....+.+.|. +++.+|+++. ++ |.+|+++|+++|++... .++.+|+++.++|
T Consensus 116 -pGD-Vii~~p~~~~~~~~i~~~G~---~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~--~~tk~Ivl~~p~N 188 (460)
T PRK13238 116 -KGD-VVPSNYHFDTTRAHIELNGA---TAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA--ENVPFIVMTITNN 188 (460)
T ss_pred -CCC-EEccCCcccchHHHHHHcCC---EEEEEeccccccccccccccCCcCHHHHHHHHhhcCC--CceeEEEEecCCC
Confidence 566 66665533455556788899 9999998641 12 45999999999975321 1245899999999
Q ss_pred ccc-cc---CChhHHHHHHHHhCCEEEeecccccc-cccCc----cchhh-hc-----CCCCCCeeEEccCCcCCCCCcc
Q 037144 245 AIT-AV---DPLKPLCDVAKQFGIWVHVDAAYAGS-ACICP----EFRHF-ID-----GVECVDSFSFNPHKWLFTTLDC 309 (502)
Q Consensus 245 ~~G-~i---dpl~eI~~i~~~~g~~lhVDaA~g~~-~~~~~----~~~~~-~~-----~~~~aDsi~~~~hK~l~~p~~~ 309 (502)
++| .+ +++++|+++|++||+++++|+|+... .++.. .+... +. -.+.+|++++++||.+++|.|
T Consensus 189 ptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G- 267 (460)
T PRK13238 189 SAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG- 267 (460)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-
Confidence 998 44 56789999999999999999987432 22211 11111 00 014689999999999999875
Q ss_pred eEEEeeCchhhhhhhcCC---cccccCccCCCCCcccccCCCcccccCCCCCC-chHHHHHHHH-hcHHHHHHHHHHHHH
Q 037144 310 CCLWVKDPSCLLSTLSTN---PQYLKNEATDQEPKEQEVGYKDWQITLCRRFR-SLKLWVVIRN-FGVANLRNFIRSHVG 384 (502)
Q Consensus 310 g~~~~r~~~~l~~~~~~~---~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~~-~g~~g~~~~~~~~~~ 384 (502)
|++++++.......-... ..|+. .++-... ..++..+++. ...+ ..+...+
T Consensus 268 G~i~~~d~~l~~~~~~~~~~~~g~~t--------------------~~g~~~~~~~Ala~~l~e~~~~~----~~~~~~~ 323 (460)
T PRK13238 268 GLLCFRDEDLFTECRTLCILYEGFPT--------------------YGGLAGRDMEALAVGLYEGMDED----YLAYRIG 323 (460)
T ss_pred eEEEcChHHHHHHhhhcccccCCccc--------------------ccCcHHHHHHHHHhhHHHhhChH----HHHHHHH
Confidence 777777654433221111 01110 0110001 1122222222 1222 3333444
Q ss_pred HHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEE
Q 037144 385 MAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFM 463 (502)
Q Consensus 385 la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~ 463 (502)
.+++|.+.|++. |+.++.|.. +..+|.-...-.. +. ...... ...++.+|.+ .|...+
T Consensus 324 ~~~~l~~~L~~~-G~~~~~p~G-g~~v~~d~~~~~~----------~~-------~~~~~~--~~~~a~~L~~e~GV~~~ 382 (460)
T PRK13238 324 QVEYLGEGLEEA-GVPIQTPAG-GHAVFVDAGKFLP----------HI-------PAEQFP--AQALACELYLEAGIRGV 382 (460)
T ss_pred HHHHHHHHHHHC-CCCeEccCC-ceEEEEEchhcCC----------CC-------CCCCCc--hHHHHHHHHHHcCeeee
Confidence 679999999887 899885443 3333322111000 00 000000 1234444443 355544
Q ss_pred EeeeE-------CC------EEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 464 THAIV-------GG------IYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 464 ~~~~~-------~g------~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
..+.+ .+ ...+|+++.-..-+.++++.+.+.|+++.+
T Consensus 383 ~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 383 EIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred cccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 44322 12 478999987433467799999999998764
No 136
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.84 E-value=8.2e-18 Score=171.65 Aligned_cols=306 Identities=10% Similarity=0.054 Sum_probs=187.1
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI 197 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl 197 (502)
..++.+.+++++|.++ .++.++|+.++..++.+... +++.|++++..|.|+..++.+.+.
T Consensus 45 ~~~LE~~lA~~~g~e~---------al~~~sG~~a~~~~i~~l~~-----------~GD~Vl~~~~~h~s~~~~~~l~~~ 104 (392)
T PLN03227 45 HLELEQCMAEFLGTES---------AILYSDGASTTSSTVAAFAK-----------RGDLLVVDRGVNEALLVGVSLSRA 104 (392)
T ss_pred HHHHHHHHHHHhCCCc---------EEEecCcHHHHHHHHHHhCC-----------CCCEEEEeccccHHHHHHHHHcCC
Confidence 3344455778888753 46677777788766655422 788999999999999998888887
Q ss_pred CCCCEEEEecCCCCCcccCHHHHHHHHHHHHh--------cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEee
Q 037144 198 DRKNIRAIKTTKSSSYGLSAESVLSQINLDVE--------AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVD 269 (502)
Q Consensus 198 g~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~--------~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVD 269 (502)
+++.++.+ |++++++.++.... ...++.+|++....+++|.+-|+++|.++|++||+++++|
T Consensus 105 ---~~~~~~~~-------d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livD 174 (392)
T PLN03227 105 ---NVRWFRHN-------DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILD 174 (392)
T ss_pred ---eEEEeCCC-------CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEE
Confidence 77777753 45555554433221 1123567888888899999999999999999999999999
Q ss_pred cccccccccCccchhh-----hcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhc-CCcccccCccCCCCCccc
Q 037144 270 AAYAGSACICPEFRHF-----IDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLS-TNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 270 aA~g~~~~~~~~~~~~-----~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~ 343 (502)
.+|+.+.+ ....+.. +....++|.++.+.+|+++ |. .|+++. ++... +.+. ....+.+.
T Consensus 175 e~~~~g~~-g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-~~-gg~v~~-~~~~~-~~~~~~~~~~~~~---------- 239 (392)
T PLN03227 175 ESFSFGTL-GKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-SV-GGMTVG-SEEVV-DHQRLSGSGYCFS---------- 239 (392)
T ss_pred Cccccccc-CCCCCcHHHHcCCCCCCCceEEEeechhhhh-cc-CcEEec-CHHHH-HHHHHhCcCcccc----------
Confidence 99973322 1111111 1113478999999999875 32 344443 33322 1221 11111111
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE----------EecCCCeeEEEE
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFE----------VAFPRNFSLVCF 412 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~----------l~~~~~~~~v~f 412 (502)
. ...++.+|+++..+ ......+++++..+++++|++.|++. ++. +......+++.+
T Consensus 240 ----------~--~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~~~~~~~i~~i 306 (392)
T PLN03227 240 ----------A--SAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLVITSDPISPIIYL 306 (392)
T ss_pred ----------C--CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCccccccccccccCCCCCCCEEEE
Confidence 1 11223344444332 11123567888899999999999753 332 122334667777
Q ss_pred EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee-------eECCEEEEEEEecCCCCcH
Q 037144 413 RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA-------IVGGIYVLRFAAGNSMTME 485 (502)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-------~~~g~~~lR~~~~~~~t~~ 485 (502)
.+.+.... ..........++.+++.++|.+..... ..-....+|++++..+| +
T Consensus 307 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t-~ 366 (392)
T PLN03227 307 RLSDQEAT-------------------RRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHT-R 366 (392)
T ss_pred EeCCHHHh-------------------hhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCC-H
Confidence 76432100 000001233577888888897543211 11224679999876655 5
Q ss_pred HHHHHHHHHHHHHHHh
Q 037144 486 SHVRAAWTVVQEHLEA 501 (502)
Q Consensus 486 ~di~~~~~~l~~~~~~ 501 (502)
+||+++++.|+++.++
T Consensus 367 eei~~~~~~l~~~~~~ 382 (392)
T PLN03227 367 EDIDKLLTVLGEAVEA 382 (392)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5999999999998764
No 137
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.84 E-value=2.1e-18 Score=174.56 Aligned_cols=292 Identities=12% Similarity=0.053 Sum_probs=185.6
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
.+..++.+.+++++|.+. .+++++|+++++.++.+... ++++|+++...|.+...+++..
T Consensus 61 ~~~~~l~~~la~~~~~~~---------~i~~~~G~~~~~~~l~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~ 120 (360)
T TIGR00858 61 PLHEELEEELAEWKGTEA---------ALLFSSGYLANVGVISALVG-----------KGDLILSDALNHASLIDGCRLS 120 (360)
T ss_pred HHHHHHHHHHHHHhCCCC---------EEEECchHHHHHHHHHHhCC-----------CCCEEEEEccccHHHHHHHHhc
Confidence 344455566777777542 45556668887765544322 5678888999999999999999
Q ss_pred CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccc
Q 037144 196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS 275 (502)
Q Consensus 196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~ 275 (502)
|+ +++.++. +|+++|++.+++.. +.++.+|+.....+++|.+.|+++|.++|+++|+++++|++|+.+
T Consensus 121 g~---~~~~~~~-------~d~~~l~~~~~~~~--~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~ 188 (360)
T TIGR00858 121 GA---RVRRYRH-------NDVEHLERLLEKNR--GERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTG 188 (360)
T ss_pred CC---ceEEecC-------CCHHHHHHHHHHcc--cCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECccccc
Confidence 98 8887763 58899999986532 112346777778889999999999999999999999999999754
Q ss_pred cccCccch-hhhcCC--CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccCCCccc
Q 037144 276 ACICPEFR-HFIDGV--ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVGYKDWQ 351 (502)
Q Consensus 276 ~~~~~~~~-~~~~~~--~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~ 351 (502)
.+...... ....++ ...|++..++||+++.+ | |+++. ++.... .+.. ...+..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-g-G~~~~-~~~~~~-~~~~~~~~~~~------------------- 245 (360)
T TIGR00858 189 VLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSY-G-AYVAG-SQALID-YLINRARTLIF------------------- 245 (360)
T ss_pred CcCCCCCchHHhcCCCccCCcEEEEechhhhhcc-C-cEEEc-CHHHHH-HHHHhCcccee-------------------
Confidence 33211000 001122 25678888999999764 3 66554 333322 2211 111110
Q ss_pred ccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCC
Q 037144 352 ITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNG 430 (502)
Q Consensus 352 ~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 430 (502)
..+.. ....++.++++.+ +...++.++..++++++.+.|+++ ++++. ++..+++.+.+...
T Consensus 246 -~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~------------- 307 (360)
T TIGR00858 246 -STALPPAVAAAALAALELI--QEEPWRREKLLALIARLRAGLEAL-GFTLM-PSCTPIVPVIIGDN------------- 307 (360)
T ss_pred -cCCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHHc-CCccC-CCCCCEEEEEeCCH-------------
Confidence 01111 1112333444433 223567788999999999999987 67765 45566776665321
Q ss_pred CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee---ECCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144 431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI---VGGIYVLRFAAGNSMTMESHVRAAWTVVQ 496 (502)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~t~~~di~~~~~~l~ 496 (502)
....++.++|.++|..+..... ..+..++|++++.+ ++++++++++++|+
T Consensus 308 ---------------~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~-~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 308 ---------------ASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAA-HTPGDIDRLAEALK 360 (360)
T ss_pred ---------------HHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCC-CCHHHHHHHHHhhC
Confidence 1134677777777765433211 12346899998744 55679999998763
No 138
>PRK09265 aminotransferase AlaT; Validated
Probab=99.83 E-value=2.9e-18 Score=176.38 Aligned_cols=321 Identities=9% Similarity=0.021 Sum_probs=198.7
Q ss_pred cccccChhhHHHHHHHHHHHHHhc--CCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCC
Q 037144 106 LDWISSPAAVELENIVMDWLGQML--DLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQ 183 (502)
Q Consensus 106 ~~~~~~p~~~~le~~~~~~l~~l~--g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~ 183 (502)
..|....+..++.+.+.+|+.... +++.+ ..++|+|+++++..++.+... +++.|+++..
T Consensus 66 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~Vlv~~p 127 (404)
T PRK09265 66 QGYSDSKGLFSARKAIMQYYQQKGIPDVDVD-------DIYIGNGVSELIVMAMQALLN-----------NGDEVLVPAP 127 (404)
T ss_pred CCCCCCCCcHHHHHHHHHHHhccCCCCCCcc-------cEEEeCChHHHHHHHHHHhCC-----------CCCEEEEeCC
Confidence 356555556778888888876432 33332 688899998888666655432 5778888999
Q ss_pred CchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHH
Q 037144 184 THCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAK 260 (502)
Q Consensus 184 ~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~ 260 (502)
+|..+..+++..|. +++.++++.++++.+|+++|++++++.+ .+|+++.++|+||.+-+ +++|+++|+
T Consensus 128 ~y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~P~NPtG~~~~~~~~~~i~~~a~ 198 (404)
T PRK09265 128 DYPLWTAAVSLSGG---KPVHYLCDEEAGWFPDLDDIRSKITPRT------KAIVIINPNNPTGAVYSKELLEEIVEIAR 198 (404)
T ss_pred CCcChHHHHHHcCC---EEEEEecccccCCCCCHHHHHHhccccc------eEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence 99999999999998 8999988754457899999999886543 37888899999999977 899999999
Q ss_pred HhCCEEEeecccccccccCccchhhhcCCCCCCeeE-EccCCcCCC-CCcceEEEee-CchhhhhhhcCCcccccCccCC
Q 037144 261 QFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFS-FNPHKWLFT-TLDCCCLWVK-DPSCLLSTLSTNPQYLKNEATD 337 (502)
Q Consensus 261 ~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~-~~~hK~l~~-p~~~g~~~~r-~~~~l~~~~~~~~~yl~~~~~~ 337 (502)
++|+++++|.+|+..............-......++ .++.|.++. ...+|+++.. +........... ..+....
T Consensus 199 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~-~~~~~~~-- 275 (404)
T PRK09265 199 QHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGL-DMLASMR-- 275 (404)
T ss_pred HCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHH-HHHhccc--
Confidence 999999999999765432111111111111223454 457999954 4557888763 332111111000 0000000
Q ss_pred CCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-HHHHHH---HHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEE-
Q 037144 338 QEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV-ANLRNF---IRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCF- 412 (502)
Q Consensus 338 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~---~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f- 412 (502)
+ ....+...++...++. +.+.+. .++..+.++.+.+.|++.+++++. +|..+++.|
T Consensus 276 ------------~------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~-~p~~g~~l~~ 336 (404)
T PRK09265 276 ------------L------CANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCV-KPKGALYAFP 336 (404)
T ss_pred ------------c------CCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc-CCCcceEEEE
Confidence 0 0022233333333321 222222 235666788888899888888765 455555554
Q ss_pred EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHH
Q 037144 413 RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRA 490 (502)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~ 490 (502)
++++... .. ......+.+.+.+.|..+.++..+. +..++|+++. .+++++++
T Consensus 337 ~~~~~~~--------------------~~---~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~---~~~e~l~~ 390 (404)
T PRK09265 337 KLDPKVY--------------------PI---HDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL---PRVDDLEE 390 (404)
T ss_pred Eeccccc--------------------CC---CCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeC---CCHHHHHH
Confidence 4432100 00 0002234555666787655554442 3569999985 46779999
Q ss_pred HHHHHHHHHHh
Q 037144 491 AWTVVQEHLEA 501 (502)
Q Consensus 491 ~~~~l~~~~~~ 501 (502)
+++.|.++.+.
T Consensus 391 ~l~rl~~~l~~ 401 (404)
T PRK09265 391 AIGRIGRFLSG 401 (404)
T ss_pred HHHHHHHHHHH
Confidence 99999887664
No 139
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=8.1e-18 Score=169.77 Aligned_cols=285 Identities=12% Similarity=0.055 Sum_probs=189.1
Q ss_pred HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK 200 (502)
Q Consensus 121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~ 200 (502)
+++.++++++.+.+ ..++|+|+++++..++.+..+ +++.|+++...+..+...++..|+
T Consensus 64 lr~~ia~~~~~~~~-------~i~it~G~~~~l~~~~~~l~~-----------~gd~Vlv~~p~y~~~~~~~~~~g~--- 122 (351)
T PRK14807 64 LREELARYCSVVPT-------NIFVGNGSDEIIHLIMLAFIN-----------KGDVVIYPHPSFAMYSVYSKIAGA--- 122 (351)
T ss_pred HHHHHHHHhCCCcc-------cEEEecCHHHHHHHHHHHhcC-----------CCCEEEEeCCChHHHHHHHHHcCC---
Confidence 33445555677654 588999988887666554432 677888888888888888899999
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICP 280 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~ 280 (502)
+++.+++++ ++.+|++++++++++. ++.+|+++.++|+||.+-+.+++.++|++++.++++|.+|+.+. ..
T Consensus 123 ~~~~v~~~~--~~~~d~~~l~~~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~--~~ 193 (351)
T PRK14807 123 VEIPVKLKE--DYTYDVGSFIKVIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFY--GN 193 (351)
T ss_pred eEEEeecCC--CCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhc--cc
Confidence 999999874 4689999999998642 12367778999999999999999999999889999999996542 11
Q ss_pred cchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCC
Q 037144 281 EFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFR 359 (502)
Q Consensus 281 ~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~ 359 (502)
.....+... .-..+..+++|.++ ....+|+++. ++... +.+...... +. ..
T Consensus 194 ~~~~~~~~~-~~vi~~~S~SK~~~~~GlRiG~~v~-~~~~~-~~~~~~~~~-------------------~~------~~ 245 (351)
T PRK14807 194 TIVDVINEF-ENLIVLRTLSKAFGLAGLRVGYAVA-NENIL-KYLNLVKSP-------------------YN------IN 245 (351)
T ss_pred chHHHhhhC-CCEEEEecchHhcccchhceeeeec-CHHHH-HHHHHccCC-------------------CC------cC
Confidence 111112111 11255567999997 5566777764 33332 222211000 00 12
Q ss_pred chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccc
Q 037144 360 SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFS 439 (502)
Q Consensus 360 al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (502)
.+...++...+....+.+.+++..++++++.+.|++.+++++. ++..+.+.+++. .
T Consensus 246 ~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~i~~~-~---------------------- 301 (351)
T PRK14807 246 SLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIKVY-PSKTNFILVKFK-D---------------------- 301 (351)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cCCccEEEEEcC-C----------------------
Confidence 2333444444434456777777888888999999888888764 555555444442 1
Q ss_pred hhHhhHHHHHHHHHHHHhcCcEEEEeee-ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 440 EEERTNEFNRELLESINVSGKVFMTHAI-VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 440 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
...+.+.+.+.|..+..... .....++|++++ ..++.++++++|+++.
T Consensus 302 --------~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 302 --------ADYVYQGLLERGILVRDFSKVEGLEGALRITVS----SCEANDYLINGLKELL 350 (351)
T ss_pred --------HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHhh
Confidence 23566777777865433221 123568999986 3468999999998753
No 140
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.83 E-value=4e-18 Score=172.38 Aligned_cols=290 Identities=12% Similarity=0.085 Sum_probs=188.6
Q ss_pred HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCC
Q 037144 119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID 198 (502)
Q Consensus 119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg 198 (502)
.++++++++.+|++.+ ..++|+|+++++..++.+. . ++.+++. .+.+..+...++..|+
T Consensus 58 ~~lr~~ia~~~~~~~~-------~i~it~Ga~~~l~~~~~~l-~-----------~g~viv~-~P~y~~~~~~~~~~g~- 116 (356)
T PRK08056 58 RHLHQALARHHQVPAS-------WILAGNGETESIFAVVSGL-K-----------PRRAMIV-TPGFAEYRRALQQVGC- 116 (356)
T ss_pred HHHHHHHHHHhCcChh-------hEEECCCHHHHHHHHHHHh-C-----------CCCEEEe-CCCcHHHHHHHHHcCC-
Confidence 3566667777888654 5889999888876555432 1 3444444 4567778888899999
Q ss_pred CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccc
Q 037144 199 RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGS 275 (502)
Q Consensus 199 ~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~ 275 (502)
+++.+|+++++++.+| +++++.+.+. +.+|+++.++|+||.+-+ +++|+++|+++++++++|++|..+
T Consensus 117 --~~~~v~~~~~~~~~~~-~~~~~~~~~~------~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~ 187 (356)
T PRK08056 117 --EIRRYSLREADGWQLT-DAILEALTPD------LDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDF 187 (356)
T ss_pred --eEEEEecccccCCCcc-HHHHHhccCC------CCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhcc
Confidence 9999998754445666 3454555422 237778899999999987 888999999999999999999765
Q ss_pred cccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144 276 ACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL 354 (502)
Q Consensus 276 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 354 (502)
.......-..+... ....++.+++|+++ ....+|+++..++..+.........+ +
T Consensus 188 ~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~~~--------------------~--- 243 (356)
T PRK08056 188 IPDETGFIPQLADN-PHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQMPW--------------------S--- 243 (356)
T ss_pred CCcchHHHHHhccC-CCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCC--------------------c---
Confidence 42211111112222 24567789999998 55778888775544332221111000 0
Q ss_pred CCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcc
Q 037144 355 CRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYD 433 (502)
Q Consensus 355 sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 433 (502)
...+...++...+ +.+...+..++..+.++++.+.|++++++++. ++..+.+.++....
T Consensus 244 ---~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~---------------- 303 (356)
T PRK08056 244 ---INAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVW-PGRANYLFLRCERP---------------- 303 (356)
T ss_pred ---hhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCCCcEEEEEcCCC----------------
Confidence 0123333333333 34556666778889999999999998888765 55555555444321
Q ss_pred cccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECC--EEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 434 QYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGG--IYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 434 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g--~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
..++.+.|.+.|..+..+..+.+ ..++|++++ +.++.++++++|+++.+
T Consensus 304 --------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 304 --------------DIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR----SAAENERLLAALRNVLT 354 (356)
T ss_pred --------------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc----CHHHHHHHHHHHHHHHc
Confidence 13566777777875555444432 468999986 45689999999987653
No 141
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=6.1e-18 Score=170.91 Aligned_cols=310 Identities=15% Similarity=0.065 Sum_probs=199.8
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (502)
..+.+.+...+......|. .+... ++++.+++.++.+.+ ..++|+|+++++..++.+..+
T Consensus 40 ~~~~~a~~~~~~~~~~~y~-~~~~~----~lr~aia~~~~~~~~-------~I~it~G~~~al~~~~~~l~~-------- 99 (353)
T PRK05387 40 PKVLEAIRAALGDDLRLYP-DPNAD----ALRQAIAAYYGLDPE-------QVFVGNGSDEVLAHAFLAFFN-------- 99 (353)
T ss_pred HHHHHHHHHHhhhhhhcCC-CCcHH----HHHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC--------
Confidence 3455555544432223342 22333 455666777787654 689999999998777766543
Q ss_pred cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
+++.|+++.+.|..+...++..|+ +++.+|.++ ++.+|+++|++ .. .+|+++.++|+||.+-
T Consensus 100 ---~gd~vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~----~~------~~v~~~~P~NPtG~~~ 161 (353)
T PRK05387 100 ---HDRPLLFPDITYSFYPVYAGLYGI---PYEEIPLDD--DFSIDVEDYLR----PN------GGIIFPNPNAPTGIAL 161 (353)
T ss_pred ---CCCEEEEeCCCHHHHHHHHHHcCC---EEEEeecCC--CCCCCHHHHHh----cC------CEEEEeCCCCCCCCCC
Confidence 677888898888778888899999 999999864 57899999863 11 2678889999999999
Q ss_pred ChhHHHHHHHHh-CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCc
Q 037144 251 PLKPLCDVAKQF-GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNP 328 (502)
Q Consensus 251 pl~eI~~i~~~~-g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~ 328 (502)
|.+++.++++++ ++++++|.+|..+. ........... .-..++.+++|.++.| ..+|+++. ++.... .+....
T Consensus 162 ~~~~~~~l~~~~~~~~livDe~y~~~~--~~~~~~~~~~~-~~~i~~~S~SK~~~~~GlR~G~~~~-~~~~~~-~l~~~~ 236 (353)
T PRK05387 162 PLAEIERILAANPDSVVVIDEAYVDFG--GESAIPLIDRY-PNLLVVQTFSKSRSLAGLRVGFAIG-HPELIE-ALNRVK 236 (353)
T ss_pred CHHHHHHHHHhCCCcEEEEeCcccccC--CcchHHHHhhC-CCEEEEEehhHhhcchhhhceeeec-CHHHHH-HHHHhh
Confidence 999999999886 99999999995432 11111111111 2246777899998744 56777765 343322 221111
Q ss_pred ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 037144 329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNF 407 (502)
Q Consensus 329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~ 407 (502)
..... ++ ...+..+++...+. .+.+++..++..++++++.+.|++. ++++. ++..
T Consensus 237 ~~~~~----------------~~------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~ 292 (353)
T PRK05387 237 NSFNS----------------YP------LDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL-GFEVL-PSKA 292 (353)
T ss_pred ccCCC----------------CC------cCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCcC
Confidence 00000 00 12233333334432 3556778888888999999999988 78764 4555
Q ss_pred eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144 408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH 487 (502)
Q Consensus 408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d 487 (502)
+++++...+.. ..++.+.+.++|..+..........++|++++ +.++
T Consensus 293 ~~~~~~~~~~~-----------------------------~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~----~~~~ 339 (353)
T PRK05387 293 NFVFARHPSHD-----------------------------AAELAAKLRERGIIVRHFNKPRIDQFLRITIG----TDEE 339 (353)
T ss_pred cEEEEECCCCC-----------------------------HHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC----CHHH
Confidence 55554433210 24566777777865432221123568999986 4579
Q ss_pred HHHHHHHHHHHHH
Q 037144 488 VRAAWTVVQEHLE 500 (502)
Q Consensus 488 i~~~~~~l~~~~~ 500 (502)
+++++++|+++..
T Consensus 340 ~~~~~~~L~~~~~ 352 (353)
T PRK05387 340 MEALVDALKEILA 352 (353)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998764
No 142
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.83 E-value=4.3e-18 Score=174.12 Aligned_cols=326 Identities=13% Similarity=0.072 Sum_probs=206.3
Q ss_pred HHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 90 AGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
+..+.+.+...+... ...|....+..++.+.+.+|+.+.+|.+.+. ....++|+|+++++...+.+..+
T Consensus 46 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~ii~t~G~~~~i~~~~~~~~~------ 115 (385)
T PRK09276 46 PDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDP----ETEVISLIGSKEGIAHIPLAFVN------ 115 (385)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEccCcHHHHHHHHHHhCC------
Confidence 445566666555322 2345544456789999999999888863221 01377789988888766554432
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|+++.+++..+..+++..|+ +++.+|++.+..+.+|++++++++.+.+ .+|+++.++|+||.
T Consensus 116 -----~gd~Vl~~~P~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~ 181 (385)
T PRK09276 116 -----PGDVVLVPDPGYPVYKIGTIFAGG---EPYFMPLKEENGFLPDLDAIPEDVAKKA------KLMFINYPNNPTGA 181 (385)
T ss_pred -----CCCEEEEcCCCCcChHHHHHHcCC---EEEEEecCCCCCCcCCHHHHHHhccccc------eEEEEeCCCCCCCC
Confidence 677888899999888899999999 9999999754447789999988876433 37888889999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhh
Q 037144 249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLS 322 (502)
Q Consensus 249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~ 322 (502)
+-+ +++|+++|++||+|+++|.+|+.+.......... +.+......+..++.|.++.| ..+|+++. ++....
T Consensus 182 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~-~~~l~~- 259 (385)
T PRK09276 182 VADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVG-NADLIA- 259 (385)
T ss_pred CCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeC-CHHHHH-
Confidence 966 6888899999999999999997654321111111 111112235567799998644 45787764 343322
Q ss_pred hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144 323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFE 400 (502)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~ 400 (502)
.+.....++.. ....+...++...+ ....+++..+++.++++++.+.|++. +++
T Consensus 260 ~~~~~~~~~~~-----------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~ 315 (385)
T PRK09276 260 GLGKVKSNVDS-----------------------GVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-GLE 315 (385)
T ss_pred HHHHHHhhccC-----------------------CCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCc
Confidence 22111111100 00112222233333 34556777788888899999999987 787
Q ss_pred EecCCCeeEE-EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEEEEE
Q 037144 401 VAFPRNFSLV-CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYVLRF 476 (502)
Q Consensus 401 l~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~ 476 (502)
+. ++..+++ ++++++ .. ...++.+++.+ .|..+.++..+. +..++|+
T Consensus 316 ~~-~~~~~~~~~v~~~~-~~---------------------------~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ri 366 (385)
T PRK09276 316 VE-PPKATFYVWAPVPK-GY---------------------------TSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRI 366 (385)
T ss_pred cc-CCCcceEEEEECCC-CC---------------------------CHHHHHHHHHHhCCEEECCchhhCCCCCCeEEE
Confidence 65 4444553 444332 11 02355666654 576544443333 2469999
Q ss_pred EecCCCCcHHHHHHHHHHHHH
Q 037144 477 AAGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 477 ~~~~~~t~~~di~~~~~~l~~ 497 (502)
+++ .+++++..+++.|.+
T Consensus 367 s~~---~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 367 ALT---VPDERIEEAVERIKK 384 (385)
T ss_pred EeC---CCHHHHHHHHHHHhh
Confidence 986 256688888877754
No 143
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.83 E-value=1.4e-17 Score=170.77 Aligned_cols=333 Identities=12% Similarity=0.043 Sum_probs=208.3
Q ss_pred HHHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 037144 89 VAGIVGEMLSSGFNVV---GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL 165 (502)
Q Consensus 89 ~~~~~~~~l~~~~n~~---~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~ 165 (502)
+|..+.+.+...++.. ...|....+...+.+.+.+++...++..-.. ...++|+|+++++..++.....
T Consensus 47 ~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~-----~~i~~t~G~~~al~~~~~~l~~--- 118 (394)
T PRK06836 47 PPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTA-----DHIVMTCGAAGALNVALKAILN--- 118 (394)
T ss_pred CCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCc-----CcEEEeCChHHHHHHHHHHhcC---
Confidence 3455666665555322 3446555677888888889988876652211 2588999999988766655432
Q ss_pred HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144 166 KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245 (502)
Q Consensus 166 ~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~ 245 (502)
+++.|+++..++..+...++..|+ +++.+|++++ ++.+|+++|++++++++ .+|+++.++|+
T Consensus 119 --------~gd~Vli~~p~~~~~~~~~~~~g~---~v~~v~~~~~-~~~~d~~~l~~~~~~~~------~~v~~~~p~NP 180 (394)
T PRK06836 119 --------PGDEVIVFAPYFVEYRFYVDNHGG---KLVVVPTDTD-TFQPDLDALEAAITPKT------KAVIINSPNNP 180 (394)
T ss_pred --------CCCEEEEcCCCCccHHHHHHHcCC---EEEEEecCCc-cCcCCHHHHHhhcCcCc------eEEEEeCCCCC
Confidence 567888898899888888899999 9999999764 47899999999996543 37778889999
Q ss_pred ccccCC---hhHHHHHHHH------hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCC-CCcceEEEee
Q 037144 246 ITAVDP---LKPLCDVAKQ------FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT-TLDCCCLWVK 315 (502)
Q Consensus 246 ~G~idp---l~eI~~i~~~------~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r 315 (502)
+|.+-| +++|+++|++ ||+++++|.+|................. .-..+..+++|.++. ...+|+++..
T Consensus 181 tG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~pGlRiG~~~~~ 259 (394)
T PRK06836 181 TGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYY-DNSIVVYSFSKSLSLPGERIGYIAVN 259 (394)
T ss_pred CCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHcc-CcEEEEecchhhccCcceeeEEEecC
Confidence 999966 6677777888 8999999999976543211111111111 123566779999974 4568888775
Q ss_pred CchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144 316 DPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS 395 (502)
Q Consensus 316 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~ 395 (502)
+.......+...-....... +.-....+......+.+.. +. ..+++.+.++.+.+.|++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~q~~~~~~l~~-~~--~~~~~~~~r~~l~~~L~~ 318 (394)
T PRK06836 260 PEMEDADDLVAALVFANRIL------------------GFVNAPALMQRVVAKCLDA-TV--DVSIYKRNRDLLYDGLTE 318 (394)
T ss_pred HHHhhhHHHHHHHHHHhhcc------------------ccccCCHHHHHHHHHHhCC-hH--HHHHHHHHHHHHHHHHHh
Confidence 33110000000000000000 0000012222222333322 11 234566677888888888
Q ss_pred CCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEE
Q 037144 396 DKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLR 475 (502)
Q Consensus 396 ~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR 475 (502)
. |+++. ++..+++.|...+.. + ..++.+.+.+.|..+.++..+...+++|
T Consensus 319 ~-g~~~~-~~~gg~~~~~~~~~~--------------------------~--~~~~~~~l~~~gv~v~~g~~f~~~~~iR 368 (394)
T PRK06836 319 L-GFECV-KPQGAFYLFPKSPEE--------------------------D--DVAFCEKAKKHNLLLVPGSGFGCPGYFR 368 (394)
T ss_pred C-CCEee-cCCceEEEEEeCCCC--------------------------C--HHHHHHHHHhCCEEEECchhcCCCCeEE
Confidence 7 77766 455455554332221 0 2345566667787665554454457899
Q ss_pred EEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144 476 FAAGNSMTMESHVRAAWTVVQEHLEAF 502 (502)
Q Consensus 476 ~~~~~~~t~~~di~~~~~~l~~~~~~~ 502 (502)
++++ .++++++..++.|+++.++|
T Consensus 369 i~~~---~~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 369 LSYC---VDTETIERSLPAFEKLAKEY 392 (394)
T ss_pred EEec---CCHHHHHHHHHHHHHHHHHh
Confidence 9996 25779999999999887754
No 144
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=1.2e-17 Score=159.04 Aligned_cols=375 Identities=13% Similarity=0.119 Sum_probs=248.7
Q ss_pred CCHHHHHHHHHHhhcCCCC------CCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHH
Q 037144 54 ESVETILQDVQEHIVPGIT------HWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQ 127 (502)
Q Consensus 54 ~~~~~il~~~~~~~~~~~~------~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~ 127 (502)
.++..++..+.....++.. ....|.-|+-+.+.......+.+.+.+.. ..+|..+.+...-.+++++.+.+
T Consensus 42 ~tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk---~N~Yaps~G~~~AR~AVAeYl~~ 118 (447)
T KOG0259|consen 42 VTIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGK---GNGYAPSVGILPARRAVAEYLNR 118 (447)
T ss_pred ccHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCC---CCCcCCccccHHHHHHHHHHhhc
Confidence 3455666666554433331 12346666666655554444555554433 44577777777777787777555
Q ss_pred hcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEec
Q 037144 128 MLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKT 207 (502)
Q Consensus 128 l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~ 207 (502)
-+...-. ..++++|+|+++|+-+++.+.-+ ++..|+++.++++-+.--|...|+ +|+.++.
T Consensus 119 ~l~~kl~-----a~DV~ltsGC~qAIe~~i~~LA~-----------p~aNILlPrPGfp~Y~~~a~~~~l---EVR~ydl 179 (447)
T KOG0259|consen 119 DLPNKLT-----ADDVVLTSGCSQAIELAISSLAN-----------PGANILLPRPGFPLYDTRAIYSGL---EVRYYDL 179 (447)
T ss_pred CCCCccC-----cCceEEeccchHHHHHHHHHhcC-----------CCCceecCCCCCchHHHhhhhcCc---eeEeecc
Confidence 4433211 23799999999999888776543 777899999888777778899999 9999999
Q ss_pred CCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---CChhHHHHHHHHhCCEEEeecccccccccCccchh
Q 037144 208 TKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRH 284 (502)
Q Consensus 208 ~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~ 284 (502)
-++.+|++|++.+|.++++++. ++++..++|++|.+ +-|++|+++|+|+|+.++.|..|+-..+....+-.
T Consensus 180 LPe~~weIDL~~veal~DENT~------AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvp 253 (447)
T KOG0259|consen 180 LPEKDWEIDLDGVEALADENTV------AIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVP 253 (447)
T ss_pred cCcccceechHHHHHhhccCee------EEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccc
Confidence 8777899999999999998874 78888999999998 77999999999999999999999877665433322
Q ss_pred hhcCCCCCCeeEEc-cCCcCC-CCCcceEEEeeCchhh-hhhh--cCCcccccCccCCCCCcccccCCCcccccCCCCCC
Q 037144 285 FIDGVECVDSFSFN-PHKWLF-TTLDCCCLWVKDPSCL-LSTL--STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFR 359 (502)
Q Consensus 285 ~~~~~~~aDsi~~~-~hK~l~-~p~~~g~~~~r~~~~l-~~~~--~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~ 359 (502)
.-.-.+.+-.+|++ ..|-.. ..+..|++.+.|+.-. ++.- .....++.. +. .+..
T Consensus 254 mg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~-----------------~~---~p~T 313 (447)
T KOG0259|consen 254 MGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDI-----------------IP---GPAT 313 (447)
T ss_pred hhhccccCceEeecccccccccCCceeeeEEEecccccccchHHHHHHHHHHhc-----------------cC---CccH
Confidence 21112245567766 566554 4477899998776321 1100 000011110 00 0000
Q ss_pred c--hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccc
Q 037144 360 S--LKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQ 437 (502)
Q Consensus 360 a--l~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (502)
. -++=..|..-.++-+...+.-...+++...+.|+++|++.+...|+..+..+.-...+.-
T Consensus 314 iiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~----------------- 376 (447)
T KOG0259|consen 314 IIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLF----------------- 376 (447)
T ss_pred hHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhh-----------------
Confidence 0 111223333356778888888999999999999999999987788877665543221100
Q ss_pred cchhHhhHHHHHHHHHHHHhcCc-EEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 438 FSEEERTNEFNRELLESINVSGK-VFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 438 ~~~~~~~~~~~~~l~~~l~~~g~-~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.+.+ + ...++.+|.++-. +++++..++-..|+|++++ ..++.+++++++|++...+
T Consensus 377 -~~~~--d--D~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~---~~~~~leea~~Rik~Fc~R 433 (447)
T KOG0259|consen 377 -PDIE--D--DVDFCQKLAREESVICLPGQAFGLKNWLRIVIT---VEEEMLEEAFSRIKEFCDR 433 (447)
T ss_pred -cccc--c--cHHHHHHHhhhcceEEeccccccCCCeEEEEEc---cChHHHHHHHHHHHHHHHh
Confidence 0001 1 1245555555444 4556666777899999987 4677999999999987654
No 145
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.83 E-value=7.3e-18 Score=175.76 Aligned_cols=325 Identities=12% Similarity=0.110 Sum_probs=209.6
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh
Q 037144 108 WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA 187 (502)
Q Consensus 108 ~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s 187 (502)
|....+..++.+.+++|+.+.+|.+... .....++|+|+++++...+.+..+ +++.|+++.+.+..
T Consensus 82 Y~~~~G~~~LR~aiA~~l~~~~~~~~~v---~~~~Iiit~Ga~~al~~l~~~l~~-----------pGd~Vlv~~P~Y~~ 147 (468)
T PLN02450 82 FQDYHGLPAFKNALAEFMSEIRGNKVTF---DPNKLVLTAGATSANETLMFCLAE-----------PGDAFLLPTPYYPG 147 (468)
T ss_pred CCCCCChHHHHHHHHHHHHHhhCCCCCc---ChHHeEEccChHHHHHHHHHHhCC-----------CCCEEEECCCCCCc
Confidence 4444466789999999999887743110 012588999999987666665543 67889999989888
Q ss_pred HHHHHH-HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhC
Q 037144 188 FQKAAQ-IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFG 263 (502)
Q Consensus 188 ~~~aa~-~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g 263 (502)
+...+. ..|+ +++.||+++++++.+|+++|++++++..+++.++.+|+++.++|+||.+-+ +++|.++|++||
T Consensus 148 ~~~~~~~~~g~---~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~ 224 (468)
T PLN02450 148 FDRDLKWRTGV---EIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKN 224 (468)
T ss_pred hHHHHhhcCCc---EEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCC
Confidence 888777 5898 999999875456889999999999876555656777888899999999854 667888899999
Q ss_pred CEEEeecccccccccCccchhhhc--------CCCCCC--eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCccccc
Q 037144 264 IWVHVDAAYAGSACICPEFRHFID--------GVECVD--SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLK 332 (502)
Q Consensus 264 ~~lhVDaA~g~~~~~~~~~~~~~~--------~~~~aD--si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~ 332 (502)
+|+++|.+|+...+..+.+...+. +....+ .+..++.|.++ ....+|+++..+.... ..+.....|.
T Consensus 225 ~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~-~~~~~~~~~~- 302 (468)
T PLN02450 225 IHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVV-SAATKMSSFG- 302 (468)
T ss_pred cEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHH-HHHHHHhhcC-
Confidence 999999999875443222211111 000111 45667999996 6677888877544322 2221111110
Q ss_pred CccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 037144 333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV-----ANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNF 407 (502)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~ 407 (502)
. ...+...++...+.. ..+++..+++.+.++.+.+.|++. ++.+. ++..
T Consensus 303 ~------------------------~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~-~~~~ 356 (468)
T PLN02450 303 L------------------------VSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCL-KSNA 356 (468)
T ss_pred C------------------------CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCc
Confidence 0 012222333333322 245667788888889999999887 77765 5666
Q ss_pred eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEEEEEEecCCCCc
Q 037144 408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYVLRFAAGNSMTM 484 (502)
Q Consensus 408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~~~~~~~t~ 484 (502)
+++.|.-.+.... . .. -....++.+++.+ .|..+.++..+. +.+++|+++++ .+
T Consensus 357 g~flwi~l~~~~~-------------------~-~~-~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~--~~ 413 (468)
T PLN02450 357 GLFCWVDMRHLLK-------------------S-NT-FEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN--MS 413 (468)
T ss_pred eEEEEEEchHhcC-------------------c-CC-chHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecC--CC
Confidence 6554433221110 0 00 0111345566654 466544443333 35799999975 25
Q ss_pred HHHHHHHHHHHHHHHH
Q 037144 485 ESHVRAAWTVVQEHLE 500 (502)
Q Consensus 485 ~~di~~~~~~l~~~~~ 500 (502)
++++++.++.|+++.+
T Consensus 414 ~~~l~~~l~ri~~~l~ 429 (468)
T PLN02450 414 EETLDLAMKRLKSFVE 429 (468)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6789999999988764
No 146
>PRK06855 aminotransferase; Validated
Probab=99.83 E-value=6.8e-18 Score=174.79 Aligned_cols=359 Identities=9% Similarity=0.046 Sum_probs=213.8
Q ss_pred CHHHHHHHHHHhhc-CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144 88 SVAGIVGEMLSSGF-NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK 166 (502)
Q Consensus 88 ~~~~~~~~~l~~~~-n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~ 166 (502)
.+|..+.+.+...+ +.....|....+..++.+.+.+|+.+..|++-.. ...++|+|+++++..++. ..+
T Consensus 48 ~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~-----~~I~it~G~~~al~~~~~-l~~---- 117 (433)
T PRK06855 48 KIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITP-----DDIIFFNGLGDAIAKIYG-LLR---- 117 (433)
T ss_pred CCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCH-----hHEEEcCcHHHHHHHHHH-hcC----
Confidence 44555666555544 2333457666778899999999999988864321 268899999998866542 222
Q ss_pred HhCccCCCCeEEEeCCCCchhHHHHH-HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144 167 KIGRENISKLVVYSSDQTHCAFQKAA-QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245 (502)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~aa-~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~ 245 (502)
+++.|++.+++++.+..+. ...|+ +++.+|+++++++.+|+++|+++++... .+.+++++.++|+
T Consensus 118 -------~Gd~Vlv~~P~Y~~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~~~----~~~~i~l~~P~NP 183 (433)
T PRK06855 118 -------REARVIGPSPAYSTHSSAEAAHAGY---PPVTYRLDPENNWYPDLDDLENKVKYNP----SIAGILLINPDNP 183 (433)
T ss_pred -------CCCeEEEeCCCCchHHHHHHHhcCC---eEEEEecccccCCCCCHHHHHHHHhcCC----CceEEEEECCCCC
Confidence 6778888888887755442 34577 8899998764457899999999986321 1236777789999
Q ss_pred ccccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCC-eeEEccCCcCC-CCCcceEEEeeCc---
Q 037144 246 ITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVD-SFSFNPHKWLF-TTLDCCCLWVKDP--- 317 (502)
Q Consensus 246 ~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aD-si~~~~hK~l~-~p~~~g~~~~r~~--- 317 (502)
||.+-+ +++|+++|++||+|+++|.+|+...+..........-...-. .+..++.|.++ ....+|+++..+.
T Consensus 184 TG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~ 263 (433)
T PRK06855 184 TGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKD 263 (433)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchh
Confidence 999955 677888899999999999999876542211111111011112 45567999996 6677898887321
Q ss_pred hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--c--HHHHHHHHHHHHHHHHHHHHHH
Q 037144 318 SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--G--VANLRNFIRSHVGMAKLFERLV 393 (502)
Q Consensus 318 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g--~~g~~~~~~~~~~la~~l~~~l 393 (502)
..+...+.....+.... . + ...+...++.+.+ + .+.+++..+.+.++++.+.+.|
T Consensus 264 ~~~~~~~~~~~~~~~~~-----------------~-~---~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L 322 (433)
T PRK06855 264 EVFKKYINSILNAKMIE-----------------V-C---STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKL 322 (433)
T ss_pred hHHHHHHHHHHHhhccc-----------------c-C---CChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111000000000 0 0 0223333444444 2 3456777788888899999999
Q ss_pred hcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHH-------HHHHHHHH-HHhcCcEEEEe
Q 037144 394 TSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNE-------FNRELLES-INVSGKVFMTH 465 (502)
Q Consensus 394 ~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~-l~~~g~~~~~~ 465 (502)
++++++.+. +|+.+++.|.-.+...... ..+....+ ....+...+ ...++... +.+.|..++++
T Consensus 323 ~~~~~~~~~-~p~gg~~~w~~l~~~~~~~-----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG 394 (433)
T PRK06855 323 KDVPGLKVN-RTNGAFYMTVVFEDGVLNN-----KQSLPIEN--PEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPL 394 (433)
T ss_pred hcCCCeecc-CCCeeEEEeeccccccccc-----cccCCcch--hhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecC
Confidence 888787754 6666666654433211000 00000000 000000000 02234433 44557666655
Q ss_pred eeEC-CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 466 AIVG-GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 466 ~~~~-g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..+. ....+|+|+++ .++++|+..++.|.+++++
T Consensus 395 ~~F~~~~~~~Rls~~~--~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 395 SSFCTELNGFRVTLLE--RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred CcCCCCCCceEEEECC--CcHHHHHHHHHHHHHHHHH
Confidence 5552 22359999975 3577999999999988764
No 147
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.82 E-value=5e-18 Score=173.76 Aligned_cols=329 Identities=10% Similarity=0.009 Sum_probs=207.4
Q ss_pred HHHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCC-cEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144 90 AGIVGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNG-GGVIQGTTCEALLCTLTAARDRVLKK 167 (502)
Q Consensus 90 ~~~~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~a~~~~~~~ 167 (502)
+..+.+.+...+. .....|...++..++.+.+.+|+.+..|.+-+. . ..++|+|+++++..++.+..+
T Consensus 45 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~~I~it~Gs~~al~~~~~~l~~----- 114 (388)
T PRK07366 45 PAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDP-----ETEVLPLIGSQEGTAHLPLAVLN----- 114 (388)
T ss_pred CHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCC-----cCeEEECCCcHHHHHHHHHHhCC-----
Confidence 3445555555443 223456666677889999999999888864221 1 378889999988766655433
Q ss_pred hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
+++.|++..+++..+...++..|+ +++.+|++.++.+.+|++++++.+.+. +.+|+++.++|+||
T Consensus 115 ------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~p~NPTG 179 (388)
T PRK07366 115 ------PGDFALLLDPGYPSHAGGVYLAGG---QIYPMPLRAENDFLPVFADIPTEVLAQ------ARLMVLSYPHNPTT 179 (388)
T ss_pred ------CCCEEEEcCCCCcchHHHHHhcCC---EEEEEECCCccCCCCCHHHHHHhhccc------ceEEEEeCCCCCCC
Confidence 677888899999999999999999 999999986555788999998776543 23677788999999
Q ss_pred ccC---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCC-CC--eeEEccCCcCC-CCCcceEEEeeCchhh
Q 037144 248 AVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEC-VD--SFSFNPHKWLF-TTLDCCCLWVKDPSCL 320 (502)
Q Consensus 248 ~id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~-aD--si~~~~hK~l~-~p~~~g~~~~r~~~~l 320 (502)
.+- .+++|+++|++||+|+++|.+|+-..+........+..+.. -+ .++.++.|.++ ....+|+++. ++..+
T Consensus 180 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~-~~~li 258 (388)
T PRK07366 180 AIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIG-NAQLI 258 (388)
T ss_pred ccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcC-CHHHH
Confidence 994 46677889999999999999997665421110111111111 12 34568999996 5566777764 44333
Q ss_pred hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144 321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKR 398 (502)
Q Consensus 321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~ 398 (502)
. .+.....+... + . .+.....++..+ ..+.+++..+.+.+.++++.+.|++. +
T Consensus 259 ~-~l~~~~~~~~~---------------------~-~-~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~ 313 (388)
T PRK07366 259 Q-ALRQVKAVVDF---------------------N-Q-YRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-G 313 (388)
T ss_pred H-HHHHHHhhccc---------------------C-C-CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-C
Confidence 2 22111111000 0 0 011111222222 24567788888889999999999887 6
Q ss_pred eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEE
Q 037144 399 FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLR 475 (502)
Q Consensus 399 ~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR 475 (502)
+....+.....+++.+++. . +....++.+.+. +.|..+.++..+. +..++|
T Consensus 314 ~~~~~p~~g~f~~~~~~~~-~-------------------------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iR 367 (388)
T PRK07366 314 WPVPLPEATMYVWAKLPEP-W-------------------------QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVR 367 (388)
T ss_pred CcccCCCeeEEEEEECCcc-c-------------------------CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEE
Confidence 7654333333444444321 0 000234555554 4576555544443 247999
Q ss_pred EEecCCCCcHHHHHHHHHHHHHH
Q 037144 476 FAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 476 ~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
++++. +.++++++++.|.+.
T Consensus 368 i~~~~---~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 368 FALVH---DPDILEEAVERIAAF 387 (388)
T ss_pred EEecC---CHHHHHHHHHHHHHh
Confidence 99873 467899999888764
No 148
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.82 E-value=9.6e-18 Score=172.11 Aligned_cols=326 Identities=11% Similarity=0.092 Sum_probs=205.8
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCC-CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLP-KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
+..+.+.+...++ ....|....+..++.+.+.+|+.+.+|++ -+. ....++|+|+++++..++.+..+
T Consensus 44 ~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~----~~~i~it~G~~~al~~~~~~l~~------ 112 (396)
T PRK09147 44 PAFIKDALAANLD-GLASYPTTAGLPALREAIAAWLERRYGLPALDP----ATQVLPVNGSREALFAFAQTVID------ 112 (396)
T ss_pred CHHHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCc----cceEEECCChHHHHHHHHHHHcC------
Confidence 4456666655554 33456666667889999999999988864 110 01478899999888766665433
Q ss_pred CccCCC---CeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144 169 GRENIS---KLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245 (502)
Q Consensus 169 ~~~~~~---~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~ 245 (502)
+ ++.|+++.+.+..+..+++.+|+ +++.||+++++++.+|+++|++.+.+++ .+|+++.++|+
T Consensus 113 -----~~~~gd~vlv~~P~y~~~~~~~~~~g~---~~~~vp~~~~~~~~~d~~~l~~~~~~~~------k~i~l~nP~NP 178 (396)
T PRK09147 113 -----RDGPGPLVVCPNPFYQIYEGAALLAGA---EPYFLNCDPANNFAPDFDAVPAEVWART------QLLFVCSPGNP 178 (396)
T ss_pred -----CCCCCCEEEEcCCCccchHHHHHhcCC---EEEEeccCccccCccCHHHHHHHHhhcc------EEEEEcCCCCC
Confidence 4 67888898899888899999999 9999999765557899999998876433 36777899999
Q ss_pred ccccC---ChhHHHHHHHHhCCEEEeecccccccccCc--cchhh--hcCC--CCCC--eeEEccCCcC-CCCCcceEEE
Q 037144 246 ITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHF--IDGV--ECVD--SFSFNPHKWL-FTTLDCCCLW 313 (502)
Q Consensus 246 ~G~id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~--~~~~~--~~~~--~~aD--si~~~~hK~l-~~p~~~g~~~ 313 (502)
||.+- .+++|+++|++|++|+++|.+|+...+..+ ..... ...+ ...| .+..++.|.+ .....+|+++
T Consensus 179 TG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~ 258 (396)
T PRK09147 179 TGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVA 258 (396)
T ss_pred cCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeec
Confidence 99984 577888899999999999999977543221 10000 0001 0112 5567799965 4557778876
Q ss_pred eeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHH
Q 037144 314 VKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERL 392 (502)
Q Consensus 314 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~ 392 (502)
.. +..+. .+.....+... ....+...+++..+ ..+.+.+..+.+.+.++.+.+.
T Consensus 259 ~~-~~l~~-~~~~~~~~~~~-----------------------~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (396)
T PRK09147 259 GD-AALLK-KFLLYRTYHGC-----------------------AMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPI 313 (396)
T ss_pred CC-HHHHH-HHHHHhhhccc-----------------------CCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH
Confidence 53 33332 22111111100 00122223333333 2345666777778888888888
Q ss_pred HhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--
Q 037144 393 VTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG-- 469 (502)
Q Consensus 393 l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~-- 469 (502)
|++. +.+. .|..+.+.|.-.+.. ..++.+++. +.|..+.++..+.
T Consensus 314 L~~~--~~~~-~p~~g~f~~~~~~~~-----------------------------~~~~~~~ll~~~gv~v~pg~~f~~~ 361 (396)
T PRK09147 314 LAPV--LDVQ-LPDAGFYLWAKVPGD-----------------------------DTEFARRLYADYNVTVLPGSYLARE 361 (396)
T ss_pred HHHh--cCCC-CCCeeEEEEEECCCC-----------------------------HHHHHHHHHHhCCEEEeCCcccccc
Confidence 8764 4443 344444443322211 134556654 4576554443331
Q ss_pred ------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 470 ------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 470 ------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
+..++|++++. ++++++++++.|.++.+
T Consensus 362 ~~~~~~~~~~iRi~~~~---~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 362 AHGVNPGAGRVRIALVA---PLAECVEAAERIVDFCR 395 (396)
T ss_pred ccCCCCCCCeEEEEecC---CHHHHHHHHHHHHHHhc
Confidence 24689999874 46689999999987653
No 149
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.82 E-value=1.9e-17 Score=170.27 Aligned_cols=339 Identities=13% Similarity=0.102 Sum_probs=211.7
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCC-cEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNG-GGVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
+..+..+.....+.....|....+...+.+.+++|+.+.+|.+-.. . ..++|+|+++++..++.+..+
T Consensus 49 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~-----~~~I~it~G~~~al~~~~~~l~~------ 117 (403)
T PRK08636 49 QHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDP-----ETEVVATMGSKEGYVHLVQAITN------ 117 (403)
T ss_pred HHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCeEEECCChHHHHHHHHHHhCC------
Confidence 3344444433333234556666677889999999999998864321 1 488999999988777665543
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc-CCccEEEEEecCCcccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA-ELIPLFLCATVGTTAIT 247 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~-g~~p~~Vv~t~gtt~~G 247 (502)
+++.|++.++++..+...++..|+ +++.||++.++++.+|++.|.+.+++..++ ..++.+|+.+.++|+||
T Consensus 118 -----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG 189 (403)
T PRK08636 118 -----PGDVAIVPDPAYPIHSQAFILAGG---NVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTT 189 (403)
T ss_pred -----CCCEEEEcCCCCcchHHHHHhcCC---EEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCC
Confidence 678899999999999999999999 999999864445789998776665544332 22456888888999999
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCC-C--eeEEccCCcCC-CCCcceEEEeeCchhh
Q 037144 248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECV-D--SFSFNPHKWLF-TTLDCCCLWVKDPSCL 320 (502)
Q Consensus 248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~a-D--si~~~~hK~l~-~p~~~g~~~~r~~~~l 320 (502)
.+-+ +++|+++|++|++|+++|.+|+...+...... .+..+... | ..+.++.|.++ ....+|+++. ++...
T Consensus 190 ~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~-~~~li 267 (403)
T PRK08636 190 ATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTP-SILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVG-NKKLV 267 (403)
T ss_pred ccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCC-ChhcCCCccccEEEEEecccccCCccceeeeeeC-CHHHH
Confidence 9944 67888899999999999999976543211111 11122221 2 23567999995 5567788764 44332
Q ss_pred hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144 321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFE 400 (502)
Q Consensus 321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~ 400 (502)
. .+.....+.... .+.. ....+..++.. ..+.++++.+.+.++++.+.+.|++. ++.
T Consensus 268 ~-~~~~~~~~~~~~-------------------~~~~-~q~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~ 324 (403)
T PRK08636 268 G-ALKKIKSWLDYG-------------------MFTP-IQVAATIALDG-DQSCVEEIRETYRKRRDVLIESFANA-GWE 324 (403)
T ss_pred H-HHHHHHHHhccc-------------------CChH-HHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCc
Confidence 2 222111111000 0000 01111112221 24556777778888889999999886 676
Q ss_pred EecCCCee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEE
Q 037144 401 VAFPRNFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRF 476 (502)
Q Consensus 401 l~~~~~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~ 476 (502)
+. +|..+ .+++++++. .. .. + ..++.+++. +.|..+.++..+. +..++|+
T Consensus 325 ~~-~p~~g~~~~~~l~~~-~~--------------------~~--~--~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi 378 (403)
T PRK08636 325 LQ-KPRASMFVWAKIPEP-AR--------------------HL--G--SLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRI 378 (403)
T ss_pred cc-CCCcceEEEEECCCc-cC--------------------CC--C--HHHHHHHHHHhCCEEEecchhhCcCCCCeEEE
Confidence 65 44444 444444321 00 00 0 234555544 3566555444343 2479999
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 477 AAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 477 ~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+++ .++++++++++.|+++++.
T Consensus 379 ~~~---~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 379 ALI---ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred Eec---CCHHHHHHHHHHHHHHHHh
Confidence 986 3567999999999887764
No 150
>PRK07683 aminotransferase A; Validated
Probab=99.82 E-value=1.5e-17 Score=170.02 Aligned_cols=328 Identities=12% Similarity=0.094 Sum_probs=213.4
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+......|...++..++++++.+|+.+.+|.+-+. ....++|+|+++|+..++.+...
T Consensus 43 ~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~----~~~I~~t~G~~~al~~~~~~l~~------- 111 (387)
T PRK07683 43 PSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSP----ESEIIVTIGASEAIDIAFRTILE------- 111 (387)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhCC-------
Confidence 3455666666665545566666778899999999998887764221 01589999999998766655432
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|+++...+..+..+++.+|+ +++.++.+.+ ++.+|++++++.+++.+ .+|+++.++|+||.+
T Consensus 112 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~~~~~~------~~i~i~~p~NPtG~~ 177 (387)
T PRK07683 112 ----PGTEVILPAPIYPGYEPIIRLCGA---KPVFIDTRST-GFRLTAEALENAITEKT------RCVVLPYPSNPTGVT 177 (387)
T ss_pred ----CCCEEEEcCCCccchHHHHHHcCC---EEEEeecCcc-cCCCCHHHHHHhcCcCc------eEEEEeCCCCCCCcC
Confidence 567888888888888888999999 9999998753 47889999999886533 367888999999998
Q ss_pred ---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhc--CCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhh
Q 037144 250 ---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID--GVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLST 323 (502)
Q Consensus 250 ---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~--~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~ 323 (502)
+++++|+++|+++|+++++|.+|..+...- ....... +...-..+..++.|.++ ....+|+++.. +.... .
T Consensus 178 ~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~-~~l~~-~ 254 (387)
T PRK07683 178 LSKEELQDIADVLKDKNIFVLSDEIYSELVYEQ-PHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAP-SYLAK-H 254 (387)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEecccccceeCC-CcCChhhccCCcCCeEEEeeccccccCccceeEEEEcC-HHHHH-H
Confidence 458899999999999999999998654321 1111111 11122355677999998 44557777653 33222 2
Q ss_pred hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
+.....|... + ...+...++...+ |...+++..+++.++++++.+.|.+. ++.+
T Consensus 255 ~~~~~~~~~~--------------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~ 310 (387)
T PRK07683 255 ILKVHQYNVT--------------------C---ASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-GLDV 310 (387)
T ss_pred HHHHHHhccC--------------------C---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCcc
Confidence 2111111110 0 0122222222222 44556677778888899999999886 6765
Q ss_pred ecCCCeeEEEEEeecC-cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHH-HHhcCcEEEEeeeEC--CEEEEEEE
Q 037144 402 AFPRNFSLVCFRVTPS-AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLES-INVSGKVFMTHAIVG--GIYVLRFA 477 (502)
Q Consensus 402 ~~~~~~~~v~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~g~~~~~~~~~~--g~~~lR~~ 477 (502)
. +++.+++.|...+. .. + ..++... +.+.|..+.++..+. +..++|++
T Consensus 311 ~-~~~~~~~~~~~~~~~~~-------------------------~--~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~ 362 (387)
T PRK07683 311 E-KPTGAFYLFPSIGHFTM-------------------------S--SFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLS 362 (387)
T ss_pred c-CCCeeEEEEEecccCCC-------------------------C--HHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEE
Confidence 4 56666665544331 11 0 1233433 344576554444332 35799999
Q ss_pred ecCCCCcHHHHHHHHHHHHHHHH
Q 037144 478 AGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 478 ~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
++. +++++..+++.|.++.+
T Consensus 363 ~~~---~~~~~~~al~~l~~~l~ 382 (387)
T PRK07683 363 YAY---SIETLKEGLDRLEAFLQ 382 (387)
T ss_pred ecC---CHHHHHHHHHHHHHHHH
Confidence 873 57789999998888654
No 151
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.82 E-value=5.5e-18 Score=172.40 Aligned_cols=245 Identities=13% Similarity=0.084 Sum_probs=160.2
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
.+|...++|++ +++++|.+ ..++++|||+|+..++.+..-. +++.|+++..+|.+..
T Consensus 31 ~g~~~~~le~~----la~~~g~~---------~~v~~~sgt~al~lal~al~~~----------~Gd~Viv~~~~~~~~~ 87 (379)
T PRK11658 31 TGPKNQALEQA----FCQLTGNQ---------HAIAVSSATAGMHITLMALGIG----------PGDEVITPSLTWVSTL 87 (379)
T ss_pred CCHhHHHHHHH----HHHHhCCC---------eEEEECCHHHHHHHHHHHcCCC----------CCCEEEECCCcHHHHH
Confidence 46666777766 56677764 2588899999988777655211 6788999999999999
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEee
Q 037144 190 KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVD 269 (502)
Q Consensus 190 ~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVD 269 (502)
.++...|+ +++.++++++ ++.+|+++|+++++++++ +|+.+ +.+|...|+++|.++|+++|+++++|
T Consensus 88 ~~~~~~G~---~~v~vd~~~~-~~~~d~~~l~~~i~~~tk------av~~~---~~~G~~~d~~~i~~~a~~~gi~vi~D 154 (379)
T PRK11658 88 NMIVLLGA---TPVMVDVDRD-TLMVTPEAIEAAITPRTK------AIIPV---HYAGAPADLDAIRAIGERYGIPVIED 154 (379)
T ss_pred HHHHHcCC---EEEEEecCCC-cCCcCHHHHHHhcccCCe------EEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEE
Confidence 99999999 9999999864 468999999999976443 55533 35899999999999999999999999
Q ss_pred cccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhh--cCCcccccCccCCCCCcccccCC
Q 037144 270 AAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTL--STNPQYLKNEATDQEPKEQEVGY 347 (502)
Q Consensus 270 aA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~--~~~~~yl~~~~~~~~~~~~~~~~ 347 (502)
+||+.+....... + +-.+.++++++.+|++.++ ..|+++..+++...... .....+........ ......+
T Consensus 155 ~a~a~g~~~~~~~---~-g~~g~~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~--~~~~~~~ 227 (379)
T PRK11658 155 AAHAVGTYYKGRH---I-GARGTAIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQT--QGRAPQA 227 (379)
T ss_pred CCCccCCeECCee---c-CCCCCEEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCCCcchhhhhc--ccCCCcc
Confidence 9997554332111 1 1124578889999988654 34455555554432221 11000100000000 0000000
Q ss_pred CcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 037144 348 KDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRF 399 (502)
Q Consensus 348 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~ 399 (502)
.. ...+..++...+-+++.....+++++..++..++++++.+.|++++..
T Consensus 228 ~~--~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~ 277 (379)
T PRK11658 228 EV--LTPGYKYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQ 277 (379)
T ss_pred ee--eccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 00 011212223344456655566889999999999999999999988643
No 152
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.82 E-value=8.2e-18 Score=170.52 Aligned_cols=283 Identities=15% Similarity=0.142 Sum_probs=178.7
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID 198 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg 198 (502)
++++.+++++|++.+ ..++ ++|+++++..++.+... +++.|+++...+..+...++..|+
T Consensus 73 ~lr~~ia~~~~~~~~-------~i~~~~~Ga~~~i~~~~~~~~~-----------~gd~vlv~~p~y~~~~~~~~~~g~- 133 (361)
T PRK00950 73 ELREALSKYTGVPVE-------NIIVGGDGMDEVIDTLMRTFID-----------PGDEVIIPTPTFSYYEISAKAHGA- 133 (361)
T ss_pred HHHHHHHHHhCCCHH-------HEEEeCCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC-
Confidence 344556677787654 4677 55656655444433321 567788888777777778899999
Q ss_pred CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccccc
Q 037144 199 RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI 278 (502)
Q Consensus 199 ~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~ 278 (502)
+++.+|.+. ++.+|+++|++++.+.+ .+|+++.++|++|.+-|+++|.++|+++|+++++|++|+.+.
T Consensus 134 --~~~~~~~~~--~~~~~~~~l~~~~~~~~------~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~-- 201 (361)
T PRK00950 134 --KPVYAKREE--DFSLDVDSVLNAITEKT------KVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFA-- 201 (361)
T ss_pred --EEEEeecCC--CCCcCHHHHHHHhccCC------CEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhC--
Confidence 999999653 56899999999885432 367778999999999999999999999999999999997643
Q ss_pred CccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC
Q 037144 279 CPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR 357 (502)
Q Consensus 279 ~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~ 357 (502)
............. -.+..+++|.++.| ...|+++.. +............+ .
T Consensus 202 ~~~~~~~~~~~~~-vi~~~S~SK~~g~~GlRiG~~~~~-~~~~~~~~~~~~~~--------------------~------ 253 (361)
T PRK00950 202 EYDYTPLALEYDN-LIIGRTFSKVFGLAGLRIGYGFVP-EWLIDYYMRAKTPF--------------------S------ 253 (361)
T ss_pred ccchHHHHHhcCC-EEEEEeehHhhcCchhhcchhcCC-HHHHHHHHHhcCCC--------------------C------
Confidence 1112222221111 13445789999754 456777653 32222111111000 0
Q ss_pred CCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCccccc
Q 037144 358 FRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYR 436 (502)
Q Consensus 358 ~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 436 (502)
...+....+...+. .+.+++..++..++++++.+.|. +++. ++..+++++.+.+..
T Consensus 254 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~~~~~i~~~~~~~~------------------ 310 (361)
T PRK00950 254 LTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVY-PSEANFVLVDVTPMT------------------ 310 (361)
T ss_pred CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeEC-CCcceEEEEECCCCC------------------
Confidence 12233344444442 33456666666667777766654 4443 455566666552211
Q ss_pred ccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 437 QFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 437 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
..++.+++.++|..+.++..+. +..++|++++ +.+++++++++|+++.
T Consensus 311 -----------~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~----~~~~~~~l~~~L~~il 360 (361)
T PRK00950 311 -----------AKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG----TFEENERFLEILKEIV 360 (361)
T ss_pred -----------HHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC----CHHHHHHHHHHHHHHh
Confidence 3456777777786544433332 3568999986 4569999999998865
No 153
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.82 E-value=2e-17 Score=167.05 Aligned_cols=286 Identities=11% Similarity=0.088 Sum_probs=188.7
Q ss_pred HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK 200 (502)
Q Consensus 121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~ 200 (502)
+++.+++.++++.+ ..++|+|+++++..++.+. . ++ .|++..+.+..+..+++..|+
T Consensus 59 lr~~ia~~~~~~~~-------~i~it~Ga~~~l~~~~~~~-~-----------~~-~v~i~~P~y~~~~~~~~~~g~--- 115 (354)
T PRK06358 59 LRKRIASFEQLDLE-------NVILGNGATELIFNIVKVT-K-----------PK-KVLILAPTFAEYERALKAFDA--- 115 (354)
T ss_pred HHHHHHHHhCCChh-------hEEECCCHHHHHHHHHHHh-C-----------CC-cEEEecCChHHHHHHHHHcCC---
Confidence 33445555577654 6899999998886655432 1 33 466788888889999999999
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSAC 277 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~ 277 (502)
+++.+|++.++++.+| +++.+.+.+. +.+|+++.++|+||.+-+ +++|.++|++||+|+++|.+|..+..
T Consensus 116 ~~~~~~~~~~~~~~~d-~~~~~~~~~~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~ 188 (354)
T PRK06358 116 EIEYAELTEETNFAAN-EIVLEEIKEE------IDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLE 188 (354)
T ss_pred eeEEEeCccccCCCcc-HHHHHhhccC------CCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCC
Confidence 9999999755457889 6665555332 336777899999999965 88888899999999999999976543
Q ss_pred cCccchhhhcCCCCCC--eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144 278 ICPEFRHFIDGVECVD--SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL 354 (502)
Q Consensus 278 ~~~~~~~~~~~~~~aD--si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 354 (502)
... ....+..+...+ .+..++.|.++ ....+|+++..++............+
T Consensus 189 ~~~-~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~~------------------------ 243 (354)
T PRK06358 189 ENE-TISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREPW------------------------ 243 (354)
T ss_pred Ccc-chhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCC------------------------
Confidence 211 111111222222 44567999998 66778888765443322111111100
Q ss_pred CCCCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcc
Q 037144 355 CRRFRSLKLWVVIRNFGV-ANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYD 433 (502)
Q Consensus 355 sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 433 (502)
....+..+++...+.. +.+.+.++...+.++++.+.|++.+++++. ++..+.+++++++
T Consensus 244 --~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~g~f~~~~~~~----------------- 303 (354)
T PRK06358 244 --SINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVY-KPSVNFIFFKLEK----------------- 303 (354)
T ss_pred --cchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCcceEEEEEcCc-----------------
Confidence 0123334444444433 345777888888899999999988887765 5566655554432
Q ss_pred cccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 434 QYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 434 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
..++.+++.+.|..+..+..+. +..++|+++. +.++.++++++|+++.
T Consensus 304 --------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~~----~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 304 --------------PIDLRKELLKKGILIRSCSNYRGLDENYYRVAVK----SREDNKKLLKALEVIL 353 (354)
T ss_pred --------------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence 1356777777787665555553 3468999986 5569999999998764
No 154
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.82 E-value=1.1e-17 Score=165.16 Aligned_cols=336 Identities=15% Similarity=0.112 Sum_probs=219.4
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (502)
....+.+...+..+- ...+|-..++|++ +++.+|.+. ++.+++||.|+.+|+.+.--.
T Consensus 15 ~~e~~~v~~vl~sg~--i~~G~~v~~FE~~----~ae~~G~k~---------ava~~sgT~AL~laL~al~ig------- 72 (374)
T COG0399 15 EEELAAVQEVLKSGW--LTGGPFVRRFEQA----FAEYLGVKY---------AVAVSSGTAALHLALLALAIG------- 72 (374)
T ss_pred hHHHHHHHHHHHcCC--eecChHHHHHHHH----HHHHhCCCe---------EEEecChHHHHHHHHHhcCCC-------
Confidence 334445555554442 2347878888875 778888864 688999999999988754311
Q ss_pred cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
++++|+++..+..+..+++-+.|+ +++.|++|++ ++.||++.||++|+++++ .|+..+ ..|...
T Consensus 73 ---~GDeVI~ps~TfvATan~i~~~Ga---~PVFvDid~~-T~nid~~~ie~aIt~~tK------AIipVh---l~G~~~ 136 (374)
T COG0399 73 ---PGDEVIVPSFTFVATANAVLLVGA---KPVFVDIDPD-TLNIDPDLIEAAITPRTK------AIIPVH---LAGQPC 136 (374)
T ss_pred ---CCCEEEecCCchHHHHHHHHHcCC---eEEEEecCCc-ccCCCHHHHHHHcccCCe------EEEEeh---hccCCC
Confidence 788999999999999999999999 9999999975 689999999999998765 565554 678889
Q ss_pred ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCccc
Q 037144 251 PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQY 330 (502)
Q Consensus 251 pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~y 330 (502)
++++|.++|++||++++.|+|++-+...-.+. .-.+..+-+++|.+.|.+.+. ..|++++.|++.......
T Consensus 137 dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~---vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~----- 207 (374)
T COG0399 137 DMDAIMALAKRHGLPVIEDAAQAHGATYKGKK---VGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARS----- 207 (374)
T ss_pred CHHHHHHHHHHcCCeEEEEcchhccCeecCcc---cccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHH-----
Confidence 99999999999999999999998775432211 222445668888899998766 677777777655432211
Q ss_pred ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEE
Q 037144 331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLV 410 (502)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v 410 (502)
+...+.. ... ....+....+-..+--.+-+++.....+.++++.++..+++++..+.|++++++.+...+....-
T Consensus 208 lr~hG~~---~~~--~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~ 282 (374)
T COG0399 208 LRNHGLS---RDA--VFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVH 282 (374)
T ss_pred HHHhCcC---CCc--cccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCcee
Confidence 1111100 000 00111122222333334445555555688899999999999999999999988776544332212
Q ss_pred EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE---EEEeee----E---------------
Q 037144 411 CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV---FMTHAI----V--------------- 468 (502)
Q Consensus 411 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~----~--------------- 468 (502)
.+...+..++. + ......+.+.|++.|.. +..+.. +
T Consensus 283 ~~~~~~i~~~~------------------~----~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae 340 (374)
T COG0399 283 AWHLYTILVDE------------------E----GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAE 340 (374)
T ss_pred eeeeeEEEecC------------------C----CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHH
Confidence 22211110000 0 01134566777777543 111100 0
Q ss_pred -CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 469 -GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 469 -~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.....+++= +++..+++|++++++.|+++...
T Consensus 341 ~~~~r~l~LP-~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 341 DLSERILSLP-LHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred HHhhCeEEcc-CCCCCCHHHHHHHHHHHHHHhcc
Confidence 012345554 36778888999999999988754
No 155
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.81 E-value=2.3e-18 Score=166.85 Aligned_cols=369 Identities=10% Similarity=0.037 Sum_probs=242.7
Q ss_pred HHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccC
Q 037144 58 TILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFL 136 (502)
Q Consensus 58 ~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~ 136 (502)
.+..++.+........ +| +|.-...-.+|..+.+.+....... ...|..+-+..++.+.+++.+++++|.....
T Consensus 18 ~vw~e~~~la~e~~~~--~~--LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~- 92 (420)
T KOG0257|consen 18 YVWTEINRLAAEHKVP--NP--LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDP- 92 (420)
T ss_pred cHHHHHHHHHHhcCCC--Cc--ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCC-
Confidence 4555555544433322 22 6665566778899998888877553 5667777888999999999999988753211
Q ss_pred cCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecC------CC
Q 037144 137 FSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTT------KS 210 (502)
Q Consensus 137 ~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~------~~ 210 (502)
..++++|.|+.+++..+++...+ +++.|++-++.+.++.....+.|. ..+.||.. ..
T Consensus 93 ---~~eVlVT~GA~~ai~~~~~~l~~-----------~GDeVii~eP~fd~Y~~~~~maG~---tpv~v~~~~~~g~~~s 155 (420)
T KOG0257|consen 93 ---DDEVLVTAGANEAISSALLGLLN-----------PGDEVIVFEPFFDCYIPQVVMAGG---TPVFVPLKPKEGNVSS 155 (420)
T ss_pred ---cccEEEecCchHHHHHHHHHHcC-----------CCCEEEEecCcchhhhhHHhhcCC---cceeeccccccccccC
Confidence 12699999999999888888776 788999999999999999999999 89999887 33
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC---ChhHHHHHHHHhCCEEEeecccccccccCccc---hh
Q 037144 211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEF---RH 284 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~---~~ 284 (502)
.+|.+|++.||.+++++++ +|+++.++|++|.+- .|++|++||++||+|++.|.+|........++ ..
T Consensus 156 ~~~~~D~~~le~~~t~kTk------~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~as 229 (420)
T KOG0257|consen 156 SDWTLDPEELESKITEKTK------AIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIAS 229 (420)
T ss_pred ccccCChHHHHhhccCCcc------EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeec
Confidence 5799999999999999876 899999999999984 58999999999999999999996655432211 11
Q ss_pred hhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCC---Cc
Q 037144 285 FIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRF---RS 360 (502)
Q Consensus 285 ~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~---~a 360 (502)
+.|+.....-+.++.|+++ +....|+++. ++.++......+... .+.++.++ .+
T Consensus 230 -lPgm~ertitvgS~gKtf~~TGWrlGW~ig-p~~L~~~~~~vh~~~--------------------~~~~~Tp~q~A~a 287 (420)
T KOG0257|consen 230 -LPGMYERTITVGSFGKTFGVTGWRLGWAIG-PKHLYSALFPVHQNF--------------------VFTCPTPIQEASA 287 (420)
T ss_pred -CCchhheEEEeccccceeeeeeeeeeeeec-hHHhhhhHHHHhhcc--------------------ccccCcHHHHHHH
Confidence 2344344455667999996 6677888887 554433222222111 11122111 11
Q ss_pred hHHHHHH--HHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccc
Q 037144 361 LKLWVVI--RNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQ 437 (502)
Q Consensus 361 l~~~~~l--~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (502)
.+....+ ..-+ .....++.+.+.++++.|.+.|.++ |+.+..+.....+...+.... .++.
T Consensus 288 ~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~adfs~~~--~~~~------------- 351 (420)
T KOG0257|consen 288 AAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWADFSLAK--SWPF------------- 351 (420)
T ss_pred HHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEEeccccc--cCCc-------------
Confidence 1111111 1112 1334558899999999999999999 899875554444444443111 0000
Q ss_pred cchhHhhHH-HHHHHHHHHHhc-CcEEEEeeeECC-------EEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144 438 FSEEERTNE-FNRELLESINVS-GKVFMTHAIVGG-------IYVLRFAAGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 438 ~~~~~~~~~-~~~~l~~~l~~~-g~~~~~~~~~~g-------~~~lR~~~~~~~t~~~di~~~~~~l~~ 497 (502)
..+..++ ....+...+..+ |.+++++..+.. ..++|++++ -+++.++.+++.+++
T Consensus 352 --~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~---k~~~~L~~a~e~l~~ 415 (420)
T KOG0257|consen 352 --FEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFC---KADETLRKAIERLKK 415 (420)
T ss_pred --chhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHH---hhHHHHHHHHHHHhh
Confidence 0000000 012334444443 556666665532 346777765 356678888888774
No 156
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.81 E-value=3.2e-18 Score=173.64 Aligned_cols=234 Identities=15% Similarity=0.166 Sum_probs=165.4
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|...++|+. +++++|.+ ..+++++|++|+..++.+... +++.|+++...|.+..
T Consensus 38 ~~p~~~~le~~----la~l~g~~---------~a~~~~sG~~Ai~~~l~~l~~-----------~gd~Vl~~~~~y~~~~ 93 (369)
T cd00614 38 GNPTVDALEKK----LAALEGGE---------AALAFSSGMAAISTVLLALLK-----------AGDHVVASDDLYGGTY 93 (369)
T ss_pred CChhHHHHHHH----HHHHHCCC---------CEEEEcCHHHHHHHHHHHHcC-----------CCCEEEECCCCcchHH
Confidence 56666777765 56677754 368888999999888776643 5778888888887654
Q ss_pred H----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 K----AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ~----aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
. .+...|+ +++.++.+ |++++++++++. +.+|++..++|++|.+.|+++|+++|++||++
T Consensus 94 ~~~~~~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~ 157 (369)
T cd00614 94 RLFERLLPKLGI---EVTFVDPD-------DPEALEAAIKPE------TKLVYVESPTNPTLKVVDIEAIAELAHEHGAL 157 (369)
T ss_pred HHHHHHHhhcCe---EEEEeCCC-------CHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 3 4556787 88888753 588899888653 34788899999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
++||++|+.+....+ .. .++|.++.+++|+++++.. .|+++.+++.... .+.....++.
T Consensus 158 livD~t~~~~~~~~~-~~------~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~-~l~~~~~~~g----------- 218 (369)
T cd00614 158 LVVDNTFATPYLQRP-LE------LGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQ-RLRFLRLALG----------- 218 (369)
T ss_pred EEEECCCcchhcCCh-hh------hCCcEEEeccceeccCCCCceEEEEEeCcHHHHH-HHHHHHHhhC-----------
Confidence 999999987654221 11 1789999999999987643 5666665533322 1111111110
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------C
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-----------------N 406 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-----------------~ 406 (502)
-...+...|++++.+ +.+..++++..++++++.+.|++.|+++-+.-| .
T Consensus 219 ------------~~~~p~~a~~~l~~l--~tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~ 284 (369)
T cd00614 219 ------------TILSPFDAWLLLRGL--KTLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGY 284 (369)
T ss_pred ------------CCCCHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCC
Confidence 012345666666544 567778999999999999999999877644322 3
Q ss_pred eeEEEEEeec
Q 037144 407 FSLVCFRVTP 416 (502)
Q Consensus 407 ~~~v~f~~~~ 416 (502)
.++++|.+.+
T Consensus 285 g~i~s~~l~~ 294 (369)
T cd00614 285 GGVFSFELKG 294 (369)
T ss_pred ceEEEEEeCC
Confidence 6788888753
No 157
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.81 E-value=1.9e-19 Score=180.28 Aligned_cols=232 Identities=18% Similarity=0.161 Sum_probs=161.7
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR 199 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~ 199 (502)
+..+.+++.||.+.++ ++++|+|.+|..++.++.. +++.|+++..+|-|+..++.+.|+
T Consensus 70 eAe~~aA~~fGAd~t~--------flvnGsT~g~~a~i~a~~~-----------~gd~VLv~RN~HkSv~~alil~ga-- 128 (417)
T PF01276_consen 70 EAEELAARAFGADKTF--------FLVNGSTSGNQAMIMALCR-----------PGDKVLVDRNCHKSVYNALILSGA-- 128 (417)
T ss_dssp HHHHHHHHHHTESEEE--------EESSHHHHHHHHHHHHHTT-----------TTCEEEEETT--HHHHHHHHHHTE--
T ss_pred HHHHHHHHhcCCCeEE--------EEecCchHHHHHHHHHhcC-----------CCCEEEEcCCcHHHHHHHHHHcCC--
Confidence 3447789999998864 7788888999888877765 788999999999999999999999
Q ss_pred CCEEEEecCCCC---CcccCH-----HHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecc
Q 037144 200 KNIRAIKTTKSS---SYGLSA-----ESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 271 (502)
Q Consensus 200 ~~v~~v~~~~~~---~~~~d~-----~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA 271 (502)
.+++|+..... -+.+++ +.++++|++..... .|.+|++|.+| ..|.+-++++|+++|+++++.|+||+|
T Consensus 129 -~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k-~~~~vvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEA 205 (417)
T PF01276_consen 129 -IPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAK-APRLVVLTSPT-YYGVCYDIKEIAEICHKHGIPLLVDEA 205 (417)
T ss_dssp -EEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCH-CESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-T
T ss_pred -eEEEecCCccccCCccCCChhhhhHHHHHHHHHhCcccc-CceEEEEeCCC-CCeEEECHHHHHHHhcccCCEEEEEcc
Confidence 99998875211 135666 99999998764322 15567777765 899999999999999999999999999
Q ss_pred cccccccCccchhhhcCCCCCC-------eeEEccCCcCCCCCcceEEEeeCch-hhhhhh--------cCCcccccCcc
Q 037144 272 YAGSACICPEFRHFIDGVECVD-------SFSFNPHKWLFTTLDCCCLWVKDPS-CLLSTL--------STNPQYLKNEA 335 (502)
Q Consensus 272 ~g~~~~~~~~~~~~~~~~~~aD-------si~~~~hK~l~~p~~~g~~~~r~~~-~l~~~~--------~~~~~yl~~~~ 335 (502)
||+.+.+.+-++..+. -++| .++-|.||.+.+-..++++.+++.. .-.+.+ +.+|+|+..
T Consensus 206 hGah~~F~~lp~~a~~--~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lm-- 281 (417)
T PF01276_consen 206 HGAHFGFHPLPRSALA--LGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLM-- 281 (417)
T ss_dssp T-TTGGCSGGGTTCSS--TTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHH--
T ss_pred ccccccCCCCccchhh--ccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHH--
Confidence 9998877644333221 2788 9999999999999999999998875 211111 222222211
Q ss_pred CCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHH---hcCCCeEEecCC
Q 037144 336 TDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLV---TSDKRFEVAFPR 405 (502)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l---~~~~~~~l~~~~ 405 (502)
..+=.+.+.+ +.+| ++++++..++++.+++.| .++++|+++.+.
T Consensus 282 -------------------------ASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~ 329 (417)
T PF01276_consen 282 -------------------------ASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPE 329 (417)
T ss_dssp -------------------------HHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-S
T ss_pred -------------------------HHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCcc
Confidence 1122233334 3333 467788888888888888 678889988654
No 158
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.81 E-value=9.2e-18 Score=173.72 Aligned_cols=323 Identities=12% Similarity=0.093 Sum_probs=206.2
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
...+...+.+++++++.+.+|..... .....++|+|+++++.+.+.+..+ +++.|+++.+.+..+.
T Consensus 93 ~~~G~~~LR~aiA~~l~~~~~~~~~v---~p~~Ivit~G~t~al~~l~~~l~~-----------pGD~Vlv~~P~Y~~f~ 158 (447)
T PLN02607 93 DYHGLKSFRQAMASFMEQIRGGKARF---DPDRIVLTAGATAANELLTFILAD-----------PGDALLVPTPYYPGFD 158 (447)
T ss_pred CCcchHHHHHHHHHHHHHhcCCCCCc---CHHHeEEcCChHHHHHHHHHHhCC-----------CCCEEEEcCCCCcchH
Confidence 33456789999999999887731110 012688999999988665554433 6788889998988887
Q ss_pred HHHH-HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCE
Q 037144 190 KAAQ-IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ~aa~-~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~ 265 (502)
..+. ..|+ +++.|+++.++++.+|++++++++++..+.|.++.+|+++.++|++|.+-+ +++|.++|++||++
T Consensus 159 ~~~~~~~g~---~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~ 235 (447)
T PLN02607 159 RDLRWRTGV---KIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIH 235 (447)
T ss_pred HHHHhcCCc---EEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCE
Confidence 7666 4788 999999876556789999999999987777777778888999999999855 78889999999999
Q ss_pred EEeecccccccccCccchh---hhcCCC--C-CC--eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccC
Q 037144 266 VHVDAAYAGSACICPEFRH---FIDGVE--C-VD--SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEAT 336 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~---~~~~~~--~-aD--si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~ 336 (502)
+++|.+|+...+..+.+.. ...... . .+ .+..++.|.++ .....|+++..++.... .......|..
T Consensus 236 lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~-~~~~~~~~~~---- 310 (447)
T PLN02607 236 LVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVT-TARRMSSFTL---- 310 (447)
T ss_pred EEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHH-HHHHHhhcCC----
Confidence 9999999876543222211 111111 1 11 34578999997 55778888875554322 2211111100
Q ss_pred CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEE
Q 037144 337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV-----ANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVC 411 (502)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~ 411 (502)
. ..+...++...+.. ..+.+..+++.+..+.+.+.|++. ++++. ++..++++
T Consensus 311 -----------------~----s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~-~~~ag~fv 367 (447)
T PLN02607 311 -----------------V----SSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECL-KGNAGLFC 367 (447)
T ss_pred -----------------C----CHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcc-cCCeeEEE
Confidence 0 11222222222221 234455666777788888889886 77765 45555555
Q ss_pred EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC--CEEEEEEEecCCCCcHHHH
Q 037144 412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--GIYVLRFAAGNSMTMESHV 488 (502)
Q Consensus 412 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di 488 (502)
|.-.+..... .. .+...++.+++.++ |..+.++..++ ..+++|+++++. +++++
T Consensus 368 w~~L~~~~~~-----------------~~----~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~--~~~~l 424 (447)
T PLN02607 368 WMNLSPLLET-----------------PT----REGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANM--SEDTL 424 (447)
T ss_pred EEEchHhhcC-----------------CC----chhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccC--CHHHH
Confidence 4332211000 00 01123566666654 65443333343 368999999752 57789
Q ss_pred HHHHHHHHHHHH
Q 037144 489 RAAWTVVQEHLE 500 (502)
Q Consensus 489 ~~~~~~l~~~~~ 500 (502)
+..++.|.++.+
T Consensus 425 ~~gl~Ri~~~l~ 436 (447)
T PLN02607 425 EVALKRIHRFMD 436 (447)
T ss_pred HHHHHHHHHHHH
Confidence 999999988765
No 159
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.81 E-value=2.1e-17 Score=160.11 Aligned_cols=325 Identities=14% Similarity=0.161 Sum_probs=213.2
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..+..++-.++.+||+++.|++. +.+ ..+|+++-++++++.|.....+ |. ..+.+|++++.+|-..-
T Consensus 104 vqG~l~li~~Lq~~L~~ITG~Da---------vsLQP~AGAqGE~aGll~Ir~YHe~r-G~--~~R~~~LIP~SAHGTNP 171 (496)
T COG1003 104 VQGYLELIYELQEWLKEITGMDA---------VSLQPNAGAQGEYAGLLAIRAYHESR-GE--GHRNICLIPDSAHGTNP 171 (496)
T ss_pred HHHHHHHHHHHHHHHHHhcCCce---------eeccCCCCcchhhHHHHHHHHHHHHc-CC--CcCcEEEeeccccCCCh
Confidence 34667888899999999999975 333 3467788888888887764433 21 16788999999999999
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-CChhHHHHHHHHhCCEEEe
Q 037144 190 KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-DPLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 190 ~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-dpl~eI~~i~~~~g~~lhV 268 (502)
.+|.+.|. +|+.|++++ +|.+|+++|++++.++++ ++.+|.++| .|.+ .+|.||++|.+++|..+..
T Consensus 172 ASAam~G~---~VV~V~~~~--~G~VDlddLk~k~~~~~A------alMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~ 239 (496)
T COG1003 172 ASAAMAGF---KVVVVKCDE--NGNVDLDDLRAKAEDNLA------ALMITNPST-LGVFEEDIREICEIVHEAGGQVYY 239 (496)
T ss_pred hhHhhcCc---eEEEEecCC--CCCccHHHHHHHhcccee------EEEeccCcc-cccchhhHHHHHHHHHHcCCEEEe
Confidence 99999999 999999986 569999999999987664 678888774 5777 6899999999999999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-----cceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-----DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-----~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
|||.--..+-.-.... -++|.+-++.||+|.+|- |.|-+.+|.. +..++.....| ..... .
T Consensus 240 DGANlNA~vG~~rPGd-----~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~--L~pfLP~p~~~--~~~~~-----y 305 (496)
T COG1003 240 DGANLNAIVGLARPGD-----MGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAH--LAPFLPGPVVY--HDVGE-----Y 305 (496)
T ss_pred cCcchhhhhccccccc-----cccceEEeecccccccCCCCCCCCCCceehHhh--ccccCCCCccc--CCCcc-----c
Confidence 9986332221111112 189999999999998774 4555776532 22222110011 00000 0
Q ss_pred ccCCC-cccccCCCC-CC---c-hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC---eeEEEEEe
Q 037144 344 EVGYK-DWQITLCRR-FR---S-LKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN---FSLVCFRV 414 (502)
Q Consensus 344 ~~~~~-~~~~~~sr~-~~---a-l~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~---~~~v~f~~ 414 (502)
..+.. .+++.-++. ++ . ...|+-++.+|.+|+++.-+...-+|+|+.++|+. .++++..+. -.-+.+..
T Consensus 306 ~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~--~y~~~y~~~~~~~HE~ild~ 383 (496)
T COG1003 306 RLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG--YYPVPYTGENRVAHECILDA 383 (496)
T ss_pred cccCCCCccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh--cCccccCCCCcceeEEEeec
Confidence 00100 011111221 12 1 47799999999999999999999999999999986 477754433 22233333
Q ss_pred ecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECC---EEEEEEEecCCCCcHHHHHHH
Q 037144 415 TPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGG---IYVLRFAAGNSMTMESHVRAA 491 (502)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g---~~~lR~~~~~~~t~~~di~~~ 491 (502)
.|.. +...-....+.++|.+-|. -.+|.... ...+=+=.+.. -+++++|++
T Consensus 384 r~l~-----------------------~~~Gv~~~DvAKrLlD~Gf--HaPT~~FPliV~~tLMIEPTEs-Esk~eLDrf 437 (496)
T COG1003 384 RPLK-----------------------KETGVRALDVAKRLLDYGF--HAPTMYFPLIVAGTLMIEPTES-ESKEELDRF 437 (496)
T ss_pred hHhH-----------------------hhcCCcHHHHHHHHHhcCC--CCCcccCccccccceeecCCCC-CCHHHHHHH
Confidence 3210 0001123456677777785 33332211 22333333322 345799999
Q ss_pred HHHHHHHHHh
Q 037144 492 WTVVQEHLEA 501 (502)
Q Consensus 492 ~~~l~~~~~~ 501 (502)
++++.+++++
T Consensus 438 ~dami~I~~E 447 (496)
T COG1003 438 IDAMIAIREE 447 (496)
T ss_pred HHHHHHHHHH
Confidence 9999988764
No 160
>PRK10534 L-threonine aldolase; Provisional
Probab=99.81 E-value=8e-18 Score=168.67 Aligned_cols=311 Identities=14% Similarity=0.096 Sum_probs=184.5
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
|.+... +.... .....|...|...++|+. +++++|.+. .++++||+++++.++.+...
T Consensus 14 ~~~~~a-~~~~~-~~~~~Y~~~~~~~~L~~~----la~~~g~~~---------~~v~~~g~~a~~~~l~~~~~------- 71 (333)
T PRK10534 14 RAMLEA-MMAAP-VGDDVYGDDPTVNALQDY----AAELSGKEA---------ALFLPTGTQANLVALLSHCE------- 71 (333)
T ss_pred HHHHHH-HHhcc-CCCcccCCCHHHHHHHHH----HHHHhCCCe---------EEEeCchHHHHHHHHHHhcC-------
Confidence 444444 43322 233346566777777776 566678764 47888899998888776532
Q ss_pred ccCCCCeEEEeCCCCchhHHHH--HHHcC-CCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKA--AQIVG-IDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~a--a~~~G-lg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~ 246 (502)
+++.|+++...|.+...+ +...| + .++.++++. ++.+|+++|++++++....+.++.+|+++.+ ++
T Consensus 72 ----~gd~vi~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np--~~ 140 (333)
T PRK10534 72 ----RGEEYIVGQAAHNYLYEAGGAAVLGSI---QPQPIDAAA--DGTLPLDKVAAKIKPDDIHFARTRLLSLENT--HN 140 (333)
T ss_pred ----CCCeeEEechhhhhHhcCCchHHhcCc---eEEeecCCC--CCCCCHHHHHHhhcccCcCcccceEEEEecC--CC
Confidence 556677777777543332 34444 4 677777653 5799999999998653211112335666543 45
Q ss_pred cccCChhHH---HHHHHHhCCEEEeeccccccccc--CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhh
Q 037144 247 TAVDPLKPL---CDVAKQFGIWVHVDAAYAGSACI--CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLL 321 (502)
Q Consensus 247 G~idpl~eI---~~i~~~~g~~lhVDaA~g~~~~~--~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~ 321 (502)
|.+-|.++| +++|++||+|++||+||.-.... ........ ...|.++++++|.++.+ .|++++.+++...
T Consensus 141 G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~---~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i~ 215 (333)
T PRK10534 141 GKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEIT---QYCDSFTICLSKGLGTP--VGSLLVGNRDYIK 215 (333)
T ss_pred CeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHH---hcCCEEEEEeEcCCCCc--ccceEEcCHHHHH
Confidence 998776654 57889999999999997521110 11111111 13576778899988876 5654455665433
Q ss_pred hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
........+ .. +-...++.+.+++..+ +...+.+++..+.++++.+.|+++ |+++
T Consensus 216 ~~~~~~~~~-~~---------------------~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~r~~l~~~L~~~-g~~~ 270 (333)
T PRK10534 216 RARRWRKMT-GG---------------------GMRQAGILAAAGLYAL--KHNVARLQEDHDNAAWLAEQLREA-GADV 270 (333)
T ss_pred HHHHHHHHh-CC---------------------chhhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHhC-CCcc
Confidence 221111000 00 0000122222233332 112344555556778999999987 7887
Q ss_pred ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCC
Q 037144 402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNS 481 (502)
Q Consensus 402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~ 481 (502)
. ++..+++.+++.+. + ..++.+.|.++|.++ .+. ..+|++.+ .
T Consensus 271 ~-~~~~nfv~~~~~~~---------------------------~--~~~~~~~l~~~gi~v-~~~-----~~~rl~~~-~ 313 (333)
T PRK10534 271 M-RQDTNMLFVRVGEE---------------------------Q--AAALGEYMRERNVLI-NAS-----PIVRLVTH-L 313 (333)
T ss_pred C-CCCceEEEEECCch---------------------------h--HHHHHHHHHHcCeee-cCC-----ceEEEEEE-e
Confidence 6 55777777666421 0 245667777788754 322 25899874 4
Q ss_pred CCcHHHHHHHHHHHHHHHH
Q 037144 482 MTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 482 ~t~~~di~~~~~~l~~~~~ 500 (502)
+.++++++++++.|++...
T Consensus 314 r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 314 DVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred CCCHHHHHHHHHHHHHHhc
Confidence 5678899999999987653
No 161
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.81 E-value=1.3e-17 Score=169.92 Aligned_cols=222 Identities=17% Similarity=0.187 Sum_probs=156.2
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-- 187 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-- 187 (502)
..|...++|+. +++++|.+. .+++++|+.|+..++.+... +++.|+++...|.+
T Consensus 57 ~~p~~~~le~~----lA~l~g~~~---------av~~~sG~~Ai~~~l~al~~-----------~Gd~Vi~~~~~y~~t~ 112 (391)
T TIGR01328 57 GNPTVSNLEGR----IAFLEGTEA---------AVATSSGMGAIAATLLTILK-----------AGDHLISDECLYGCTF 112 (391)
T ss_pred CCchHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEecCcchHHH
Confidence 45656666655 778888753 58888899888766655432 56778888876643
Q ss_pred --HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 188 --FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 188 --~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
+...+...|+ +++.++.+ |++++++++++.+ .+|++..++|++|.+-|+++|+++|+++|++
T Consensus 113 ~~~~~~~~~~G~---~~~~vd~~-------d~e~l~~~i~~~t------klV~le~p~Np~G~v~dl~~I~~la~~~gi~ 176 (391)
T TIGR01328 113 ALLEHALTKFGI---QVDFINMA-------IPEEVKAHIKDNT------KIVYFETPANPTMKLIDMERVCRDAHSQGVK 176 (391)
T ss_pred HHHHHHHhcCCe---EEEEECCC-------CHHHHHHhhccCC------eEEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence 3445566788 88888753 7899999887544 3888899999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc-eEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC-CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE 344 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~-g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 344 (502)
++||++|+.+....+ .. .++|.++.+++|+++++... |.+++.+++.+.........++
T Consensus 177 livD~a~a~~~~~~~-~~------~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~------------- 236 (391)
T TIGR01328 177 VIVDNTFATPMLTNP-VA------LGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDM------------- 236 (391)
T ss_pred EEEECCCchhccCCc-hh------cCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhC-------------
Confidence 999999976543222 11 27999999999999877652 4444555544332211110000
Q ss_pred cCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 345 VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
.+....+...|.+++ +.+.+..++++..++++++.+.|++.|+++-+
T Consensus 237 ---------~g~~l~~~~a~l~l~--~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v 283 (391)
T TIGR01328 237 ---------TGSVISPFDAWLILR--GLKTLNIRMKRHSENAMKVAEYLKSHPAVEKV 283 (391)
T ss_pred ---------CCCCCCcHHHHHHHh--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 011224455666665 44667788999999999999999999988754
No 162
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=2.6e-17 Score=166.51 Aligned_cols=313 Identities=12% Similarity=0.099 Sum_probs=201.3
Q ss_pred CHHHHHHHHHHhhcCC-CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144 88 SVAGIVGEMLSSGFNV-VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK 166 (502)
Q Consensus 88 ~~~~~~~~~l~~~~n~-~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~ 166 (502)
.+|..+.+.+.+.+.. ....|.. ++..++ ++++++.+|.+... ..++|+|+++++..++.+..+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~l----r~~ia~~~~~~~~~------~I~~t~G~~~~i~~~~~~~~~---- 103 (356)
T PRK04870 39 RLPAELRAELGERLAEVALNRYPD-PRAAAL----KAALRAAMGVPAGA------DVLLGNGSDELIQLLALACAK---- 103 (356)
T ss_pred CCCHHHHHHHHHHhhccccccCCC-CCHHHH----HHHHHHHhCcCCCC------cEEEcCCHHHHHHHHHHHhcC----
Confidence 3444556666655533 2334543 443444 45566666775421 578888887777655544432
Q ss_pred HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144 167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246 (502)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~ 246 (502)
+++.|+++..+|..+...++..|+ +++.+|+++ ++.+|+++|+++++... +.+|+++.++|+|
T Consensus 104 -------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~--~~~~d~~~l~~~~~~~~-----~~~v~l~~p~NPt 166 (356)
T PRK04870 104 -------PGATVLAPEPGFVMYRMSAKLAGL---EFVGVPLTA--DFTLDLPAMLAAIAEHR-----PALVFLAYPNNPT 166 (356)
T ss_pred -------CCCEEEECCCCHHHHHHHHHHcCC---EEEEecCCC--CCCCCHHHHHHHhhcCC-----CCEEEEcCCCCCC
Confidence 677888999999999999999999 999999974 47899999999986421 2367778899999
Q ss_pred cccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC
Q 037144 247 TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST 326 (502)
Q Consensus 247 G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~ 326 (502)
|.+-+.+++.++++..+.++++|++|..+.. ..+...+....+ -.+..+++|++......|+++.. +..+......
T Consensus 167 G~~~~~~~~~~i~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~-vi~~~S~SK~~~~GlRiG~~i~~-~~~i~~~~~~ 242 (356)
T PRK04870 167 GNLFDDADVERIIEAAPGLVVVDEAYQPFAG--DSWLPRLARFPN-LLVMRTVSKLGLAGLRLGYLAGH-PAWIAELDKV 242 (356)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEECCchhhcC--cchHHHHhhCCC-EEEEecchhhhhHHHhhhhhhCC-HHHHHHHHHc
Confidence 9999999998888877899999999965432 111111221111 24567799954444557877654 3332222111
Q ss_pred CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 037144 327 NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR 405 (502)
Q Consensus 327 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~ 405 (502)
...| . ...+...++...+ ..+.+++..++..++++++.+.|++++++.+. ++
T Consensus 243 ~~~~--------------------~------~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~ 295 (356)
T PRK04870 243 RPPY--------------------N------VNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTVF-PS 295 (356)
T ss_pred cCCC--------------------c------CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CC
Confidence 1000 0 0122222222222 12447778888889999999999998888764 55
Q ss_pred CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCC
Q 037144 406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMT 483 (502)
Q Consensus 406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t 483 (502)
..+.+.+++. . ..++.+.+.++|..+..+..+. +..++|++++
T Consensus 296 ~~~~~~~~~~-~------------------------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---- 340 (356)
T PRK04870 296 AANFILVRVP-D------------------------------AAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG---- 340 (356)
T ss_pred CCeEEEEECC-C------------------------------HHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC----
Confidence 5566666543 1 2356666777787655443332 3569999986
Q ss_pred cHHHHHHHHHHHHHH
Q 037144 484 MESHVRAAWTVVQEH 498 (502)
Q Consensus 484 ~~~di~~~~~~l~~~ 498 (502)
+.+++++++++|+++
T Consensus 341 ~~~~~~~l~~al~~~ 355 (356)
T PRK04870 341 TPEENAQFLAALKAA 355 (356)
T ss_pred CHHHHHHHHHHHHHh
Confidence 456999999999875
No 163
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.81 E-value=2.5e-17 Score=167.31 Aligned_cols=289 Identities=14% Similarity=0.063 Sum_probs=190.9
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR 199 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~ 199 (502)
++++.+++++|++.+ ..++|+|+++++...+.+... +++.|+++.+.|..+...++..|+
T Consensus 71 ~lr~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~l~~-----------~gd~vl~~~p~y~~~~~~~~~~g~-- 130 (367)
T PRK02731 71 ELKAALAEKFGVDPE-------RIILGNGSDEILELLARAYLG-----------PGDEVIYSEHGFAVYPIAAQAVGA-- 130 (367)
T ss_pred HHHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEecCCHHHHHHHHHHcCC--
Confidence 344556677787654 578888888776444433321 567888888888777777888999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh--CCEEEeecccccccc
Q 037144 200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSAC 277 (502)
Q Consensus 200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~--g~~lhVDaA~g~~~~ 277 (502)
+++.+|.+ ++.+|+++|++++++. +.+|+++.++|+||.+-|+++|.++|+.+ |+|+++|++|..+..
T Consensus 131 -~~~~~~~~---~~~~~~~~l~~~~~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~ 200 (367)
T PRK02731 131 -KPVEVPAK---DYGHDLDAMLAAVTPR------TRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVR 200 (367)
T ss_pred -eEEEeccc---CCCCCHHHHHHHhCCC------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhcc
Confidence 99999984 4689999999988643 34777889999999999999999999875 899999999976543
Q ss_pred cCccch--hhhcCCCCCCeeEEccCCcCCC-CCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144 278 ICPEFR--HFIDGVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL 354 (502)
Q Consensus 278 ~~~~~~--~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 354 (502)
...... ..+. ...-..++.++.|.++. +..+|+++..+ ... +.+...... +.
T Consensus 201 ~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~RiG~l~~~~-~~~-~~l~~~~~~-------------------~~--- 255 (367)
T PRK02731 201 RKDYEDGLELVA-KFPNVVVTRTFSKAYGLAGLRVGYGIAPP-EII-DALNRVRQP-------------------FN--- 255 (367)
T ss_pred CcCcccHHHHHh-hcCCEEEEeeehHhhcCcccceeeeeCCH-HHH-HHHHHccCC-------------------CC---
Confidence 211110 1111 11112445578898864 45678887643 322 222111000 00
Q ss_pred CCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcc
Q 037144 355 CRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYD 433 (502)
Q Consensus 355 sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 433 (502)
...+..+++.+.+. .+.+++..++..++.+++.+.|++. ++.+. ++..+++++++.+..
T Consensus 256 ---~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~i~~~~~~--------------- 315 (367)
T PRK02731 256 ---VNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL-GLEYI-PSVGNFILVDFDDGK--------------- 315 (367)
T ss_pred ---CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCceEEEEECCCCC---------------
Confidence 02344455555543 3446777788888899999999887 77765 556667777663210
Q ss_pred cccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 434 QYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 434 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
...++.+.|.+.|..+.....+....++|++++ +.+++++++++|+++.+
T Consensus 316 -------------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 316 -------------DAAEAYQALLKRGVIVRPVAGYGLPNALRITIG----TEEENRRFLAALKEFLA 365 (367)
T ss_pred -------------CHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHh
Confidence 024567777777865444333332468999975 45699999999998765
No 164
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.81 E-value=2.1e-17 Score=168.64 Aligned_cols=338 Identities=12% Similarity=0.101 Sum_probs=197.3
Q ss_pred HHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCC
Q 037144 94 GEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENI 173 (502)
Q Consensus 94 ~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~ 173 (502)
.+.+...+.... +..++...++|++ +++++|.+. .++++|||+|+..++.+..-.
T Consensus 13 ~~~v~~~~~~~~--~~~g~~~~~le~~----la~~~g~~~---------~v~~~sgt~al~~~l~al~~~---------- 67 (380)
T TIGR03588 13 IDAVVEVLKSDF--LTQGPTVPAFEEA----LAEYVGAKY---------AVAFNSATSALHIACLALGVG---------- 67 (380)
T ss_pred HHHHHHHHhcCC--ccCChhHHHHHHH----HHHHHCCCe---------EEEEcCHHHHHHHHHHHcCCC----------
Confidence 334444443322 3345666666665 566667643 466678899987777654211
Q ss_pred CCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChh
Q 037144 174 SKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLK 253 (502)
Q Consensus 174 ~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~ 253 (502)
+++.|+++...|.+...++...|+ +++.++++++ ++.+|+++|++++++.. ..++.+|+.++ .+|...|++
T Consensus 68 ~Gd~Viv~~~~~~~~~~~~~~~G~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~--~~~t~~v~~~~---~~G~~~~~~ 138 (380)
T TIGR03588 68 PGDRVWTTPITFVATANCALYCGA---KVDFVDIDPD-TGNIDEDALEKKLAAAK--GKLPKAIVPVD---FAGKSVDMQ 138 (380)
T ss_pred CCCEEEeCCcchHHHHHHHHHcCC---EEEEEecCCC-cCCcCHHHHHHHhhccc--CCCceEEEEeC---CCCccCCHH
Confidence 678899999999999999999999 9999999753 57899999999997321 01133555543 579999999
Q ss_pred HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccC--CcCCCCCcceEEEeeCchhhhhhhcC-Cccc
Q 037144 254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPH--KWLFTTLDCCCLWVKDPSCLLSTLST-NPQY 330 (502)
Q Consensus 254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~h--K~l~~p~~~g~~~~r~~~~l~~~~~~-~~~y 330 (502)
+|+++|++||+++++|+||+.+... +. +. +......|..++++| |++..+ ..|++++.++......... ....
T Consensus 139 ~i~~l~~~~~~~lI~D~a~a~g~~~-~~-~~-~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~ 214 (380)
T TIGR03588 139 AIAALAKKHGLKIIEDASHALGAEY-GG-KP-VGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGI 214 (380)
T ss_pred HHHHHHHHcCCEEEEECCCcccCcc-CC-Ee-CCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCC
Confidence 9999999999999999999876542 11 11 111124599999988 888765 4555666665443221100 0000
Q ss_pred ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC----
Q 037144 331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN---- 406 (502)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~---- 406 (502)
................+....+...-+...+. +++-....+.+.++.++..++++++.+.|..+|++++..++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~--aa~g~~qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 292 (380)
T TIGR03588 215 TKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQ--AALGLSQLKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKS 292 (380)
T ss_pred CCCcccccccccCcceeeeeccccccCccHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEe
Confidence 00000000000000000000011111222222 222222245678899999999999999999998877553321
Q ss_pred -eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE---Eeee----E----C-----
Q 037144 407 -FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM---THAI----V----G----- 469 (502)
Q Consensus 407 -~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~----~----~----- 469 (502)
...+.+.+.... .....++.+.|.++|+... .+.. + .
T Consensus 293 ~~~~~~i~~~~~~--------------------------~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p 346 (380)
T TIGR03588 293 AWHLYPILLDQEF--------------------------GCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLP 346 (380)
T ss_pred EEEEEEEEECCcC--------------------------CCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCc
Confidence 112233332110 0013456666766676321 1100 0 0
Q ss_pred -----CEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 470 -----GIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 470 -----g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
....+++.+ ++..+++||+++++.|+++
T Consensus 347 ~a~~~~~~~l~lP~-~~~l~~~dv~~i~~~l~~~ 379 (380)
T TIGR03588 347 SAENFYLAEISLPL-HPALTLEQQQRVVETLRKV 379 (380)
T ss_pred HHHHHHhceEEcCC-CCCCCHHHHHHHHHHHHHh
Confidence 014677765 5667788999999999875
No 165
>PRK05968 hypothetical protein; Provisional
Probab=99.81 E-value=1.4e-17 Score=169.70 Aligned_cols=231 Identities=15% Similarity=0.203 Sum_probs=160.1
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh---
Q 037144 111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--- 187 (502)
Q Consensus 111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--- 187 (502)
.|...++|+ .+++++|.+. .+++++|+.|+..++.+... +++.|+++...|.+
T Consensus 62 ~p~~~~le~----~lA~l~g~~~---------av~~~sG~~Ai~~al~al~~-----------~Gd~Vl~~~~~y~~t~~ 117 (389)
T PRK05968 62 NPTVRAFEE----MLAKLEGAED---------ARGFASGMAAISSTVLSFVE-----------PGDRIVAVRHVYPDAFR 117 (389)
T ss_pred ChhHHHHHH----HHHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHHH
Confidence 444455554 4778888753 46667888888777654322 67778888877765
Q ss_pred -HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144 188 -FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV 266 (502)
Q Consensus 188 -~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l 266 (502)
+.+.+...|+ +++.++.+ |+++|++++ +.+ .+|++..++++++.+.|+++|+++|+++|+++
T Consensus 118 ~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i-~~t------klV~ie~pt~~~~~~~dl~~i~~la~~~gi~v 180 (389)
T PRK05968 118 LFETILKRMGV---EVDYVDGR-------DEEAVAKAL-PGA------KLLYLESPTSWVFELQDVAALAALAKRHGVVT 180 (389)
T ss_pred HHHHHHHHcCc---eEEEeCCC-------CHHHHHHhc-ccC------CEEEEECCCCCCCcHHHHHHHHHHHHHcCCEE
Confidence 3356677898 88888642 789999887 322 27888889999999999999999999999999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144 267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE 344 (502)
Q Consensus 267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 344 (502)
+||++|+.+...-+ .. .++|.++.++||++++|.+ .|+++ .++..+.........++..
T Consensus 181 ivD~a~a~~~~~~p-~~------~g~Divv~S~tK~l~g~~~~~gG~i~-~~~~~~~~l~~~~~~~~g~----------- 241 (389)
T PRK05968 181 MIDNSWASPVFQRP-IT------LGVDLVIHSASKYLGGHSDTVAGVVA-GSKEHIARINAEAYPYLGA----------- 241 (389)
T ss_pred EEECCCcchhccCc-hh------cCCcEEEeeccccccCCCCeEEEEEE-ECHHHHHHHHHHHHHhCCC-----------
Confidence 99999976643222 11 1689999999999998755 45544 4444332221111111110
Q ss_pred cCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC------------CeeEEEE
Q 037144 345 VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR------------NFSLVCF 412 (502)
Q Consensus 345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~------------~~~~v~f 412 (502)
....+..|..++ +.+.+..++++..++++++.+.|+++|+++.+..| ..++++|
T Consensus 242 ------------~~~~~~A~~~l~--~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf 307 (389)
T PRK05968 242 ------------KLSPFEAWLLLR--GLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSF 307 (389)
T ss_pred ------------CCChHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEE
Confidence 113455555544 44667889999999999999999999998766533 1358888
Q ss_pred Eee
Q 037144 413 RVT 415 (502)
Q Consensus 413 ~~~ 415 (502)
.+.
T Consensus 308 ~~~ 310 (389)
T PRK05968 308 IFR 310 (389)
T ss_pred EEC
Confidence 875
No 166
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=2.6e-17 Score=166.69 Aligned_cols=306 Identities=12% Similarity=0.088 Sum_probs=195.9
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC
Q 037144 93 VGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN 172 (502)
Q Consensus 93 ~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~ 172 (502)
+.+.+...++.. .|...++..+++ +++++.+|.+.+ ..++|+|+++++...+.+..+
T Consensus 47 v~~a~~~~~~~~--~~~p~~g~~~lr----~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~---------- 103 (359)
T PRK03158 47 VKEAIAAHLDEL--ALYPDGYAPELR----TKVAKHLGVDEE-------QLLFGAGLDEVIQMISRALLN---------- 103 (359)
T ss_pred HHHHHHHHHHHh--hcCCCCcHHHHH----HHHHHHhCCCHH-------HEEECCCHHHHHHHHHHHHhC----------
Confidence 445544444321 222233444455 445556677543 588999998887655444322
Q ss_pred CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCCh
Q 037144 173 ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPL 252 (502)
Q Consensus 173 ~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl 252 (502)
+++.|+++.+++..+...+...|. +++.+|++ ++.+|++++++++++.+ .+|+++.++|+||.+-|.
T Consensus 104 -~gd~v~~~~p~y~~~~~~~~~~g~---~~~~~~~~---~~~~d~~~l~~~~~~~~------~~v~i~~p~NPtG~~~~~ 170 (359)
T PRK03158 104 -PGTNTVMAEPTFSQYRHNAIIEGA---EVREVPLK---DGGHDLEAMLKAIDEQT------KIVWICNPNNPTGTYVNH 170 (359)
T ss_pred -CCCEEEEcCCCHHHHHHHHHHcCC---eEEEEecC---CCCcCHHHHHHhcCCCC------CEEEEeCCCCCCCCCCCH
Confidence 567888888899899899999999 99999987 35799999998875433 367778999999999999
Q ss_pred hHHHHHHHH--hCCEEEeecccccccccCc--cchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCC
Q 037144 253 KPLCDVAKQ--FGIWVHVDAAYAGSACICP--EFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTN 327 (502)
Q Consensus 253 ~eI~~i~~~--~g~~lhVDaA~g~~~~~~~--~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~ 327 (502)
++|.++++. +|+++++|.+|..+..... .....+... .-..+..++.|.++.| ..+|+++.. +..+. .+...
T Consensus 171 ~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~g~~GlRiG~~v~~-~~~~~-~~~~~ 247 (359)
T PRK03158 171 EELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKY-ENLIVLRTFSKAYGLAALRVGYGIAS-EELIE-KLNIA 247 (359)
T ss_pred HHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhc-CCEEEEEechHhhcCcchhhehhcCC-HHHHH-HHHHh
Confidence 999999987 5999999999976543211 111111111 2235556899999744 556877653 33322 22111
Q ss_pred cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 037144 328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN 406 (502)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~ 406 (502)
... + ....+...++...+. .+..++..+...+.++++.+.|++. ++.+. ++.
T Consensus 248 ~~~-------------------~------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~ 300 (359)
T PRK03158 248 RPP-------------------F------NTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-GLFYY-PSQ 300 (359)
T ss_pred cCC-------------------C------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeC-CCc
Confidence 000 0 013334444444442 3445666666777888888888887 77765 455
Q ss_pred eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144 407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES 486 (502)
Q Consensus 407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~ 486 (502)
.+.+++... .. ..++.+.+.+.|..+.++..+....++|++++ +.+
T Consensus 301 g~~i~~~~~-~~-----------------------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~----~~~ 346 (359)
T PRK03158 301 TNFIFVDTG-RD-----------------------------ANELFEALLKKGYIVRSGAALGFPTGVRITIG----LKE 346 (359)
T ss_pred CcEEEEECC-CC-----------------------------HHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC----CHH
Confidence 555444432 11 23566777777876555444444679999976 566
Q ss_pred HHHHHHHHHHHH
Q 037144 487 HVRAAWTVVQEH 498 (502)
Q Consensus 487 di~~~~~~l~~~ 498 (502)
++++++++|+++
T Consensus 347 ~~~~l~~al~~~ 358 (359)
T PRK03158 347 QNDKIIELLKEL 358 (359)
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
No 167
>PRK15029 arginine decarboxylase; Provisional
Probab=99.80 E-value=5.1e-17 Score=174.06 Aligned_cols=175 Identities=14% Similarity=0.120 Sum_probs=140.4
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR 199 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~ 199 (502)
+..+..+++||.+.++ ++++|+|.+|..++.++.. +++.|+++..+|-|+..++.+.|+
T Consensus 209 eAq~~aA~~fgA~~t~--------FlvNGST~gn~a~i~a~~~-----------~gd~Vlv~RN~HKSv~~al~L~ga-- 267 (755)
T PRK15029 209 ESEKYAARVFGADRSW--------SVVVGTSGSNRTIMQACMT-----------DNDVVVVDRNCHKSIEQGLILTGA-- 267 (755)
T ss_pred HHHHHHHHHhCCCcEE--------EEeCChhHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC--
Confidence 3457789999998764 7889999999877666654 788999999999999999999999
Q ss_pred CCEEEEecCCCC---CcccC-----HHHHHHHHHHHH----hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144 200 KNIRAIKTTKSS---SYGLS-----AESVLSQINLDV----EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 200 ~~v~~v~~~~~~---~~~~d-----~~~Le~~i~~~~----~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh 267 (502)
.+++++....+ .+.++ ++.++++|++.. +.+.+|.+|++|.+| ..|.+-++++|+++|+++|+.||
T Consensus 268 -~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PT-Y~Gv~~di~~I~~~~h~~~~~ll 345 (755)
T PRK15029 268 -KPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT-YDGVCYNAKEAQDLLEKTSDRLH 345 (755)
T ss_pred -eEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCC-CcceeeCHHHHHHHHHhcCCeEE
Confidence 99999754321 13455 999999997643 134577788888865 88999999999999999999999
Q ss_pred eecccccccccCccchh--hhc----CCCCCC-eeEEccCCcCCCCCcceEEEeeCc
Q 037144 268 VDAAYAGSACICPEFRH--FID----GVECVD-SFSFNPHKWLFTTLDCCCLWVKDP 317 (502)
Q Consensus 268 VDaA~g~~~~~~~~~~~--~~~----~~~~aD-si~~~~hK~l~~p~~~g~~~~r~~ 317 (502)
||.|||+.+.+.|.+.. .+. .-.++| .++-|.||++.+-..++++.+++.
T Consensus 346 vDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~ 402 (755)
T PRK15029 346 FDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_pred EECccccccccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence 99999998877776542 121 114788 889999999998888999998765
No 168
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.80 E-value=1.3e-17 Score=170.05 Aligned_cols=233 Identities=13% Similarity=0.137 Sum_probs=158.4
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|...++|+. +++++|.+ ..+++++|+.|+..++.+... +++.|+++...|.+..
T Consensus 59 ~~pt~~~Le~~----lA~l~G~~---------~al~~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~~~y~~~~ 114 (386)
T PRK06767 59 GNPTVKLFEER----MAVLEGGE---------EALAFGSGMAAISATLIGFLK-----------AGDHIICSNGLYGCTY 114 (386)
T ss_pred CCcchHHHHHH----HHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHH
Confidence 45666666655 77888864 357778888887666554432 6778888888776554
Q ss_pred HHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 KAA----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ~aa----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
... ...|+ ++..++. .|++++++++++.+ .+|+++.++|++|.+-|+++|.++|+++|++
T Consensus 115 ~~~~~~~~~~gi---~~~~~~~-------~d~~~l~~~i~~~t------klV~lesp~NptG~v~dl~~I~~la~~~g~~ 178 (386)
T PRK06767 115 GFLEVLEEKFMI---THSFCDM-------ETEADIENKIRPNT------KLIFVETPINPTMKLIDLKQVIRVAKRNGLL 178 (386)
T ss_pred HHHHHHHhhcCe---EEEEeCC-------CCHHHHHHhhCcCc------eEEEEeCCCCCCceecCHHHHHHHHHHcCCE
Confidence 443 33455 5544432 37899999886543 3888899999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
++||+||+.+....| .. .++|+++.+++|+++++.. .|+++.++. .+..........+.
T Consensus 179 vivD~a~a~~~~~~p-l~------~g~Div~~S~sK~l~g~g~~~gG~v~~~~~-~i~~~~~~~~~~~g----------- 239 (386)
T PRK06767 179 VIVDNTFCSPYLQRP-LE------LGCDAVVHSATKYIGGHGDVVAGVTICKTR-ALAEKIRPMRKDIG----------- 239 (386)
T ss_pred EEEECCCcccccCCc-hh------cCCcEEEecCcceecCCCCceeEEEEeChH-HHHHHHHHHHHHhC-----------
Confidence 999999975443322 11 2789999999999987755 466665543 22221111000010
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------CeeEEEE
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-----------NFSLVCF 412 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-----------~~~~v~f 412 (502)
....++..|+.++. .+.+..++++..++++++.+.|+++|+++.+.-| ..++|+|
T Consensus 240 ------------~~~~~~~a~l~~~~--L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf 305 (386)
T PRK06767 240 ------------GIMAPFDAWLLLRG--LKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISF 305 (386)
T ss_pred ------------CCCCHHHHHHHHcC--CCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEE
Confidence 01133445655544 3456678899999999999999999999865422 2468899
Q ss_pred Eee
Q 037144 413 RVT 415 (502)
Q Consensus 413 ~~~ 415 (502)
.+.
T Consensus 306 ~l~ 308 (386)
T PRK06767 306 SIK 308 (386)
T ss_pred EEc
Confidence 875
No 169
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.80 E-value=3.5e-17 Score=169.76 Aligned_cols=303 Identities=12% Similarity=0.053 Sum_probs=198.5
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch
Q 037144 107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC 186 (502)
Q Consensus 107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~ 186 (502)
.|....+..++.+.+.+|+...++.++ ..++|+|+++++..++.+..+ +++.|++..+++.
T Consensus 116 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~--------~Iiit~G~~~al~~~~~~l~~-----------pgd~Vlv~~P~y~ 176 (431)
T PRK15481 116 LYGDAPVSPELHAWAARWLRDDCPVAF--------EIDLTSGAIDAIERLLCAHLL-----------PGDSVAVEDPCFL 176 (431)
T ss_pred hcCCcCCCHHHHHHHHHHHhhccCCcC--------eEEEecCcHHHHHHHHHHhCC-----------CCCEEEEeCCCcH
Confidence 354444556777777788776443222 589999999988777665543 6788889999999
Q ss_pred hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe-cCCccccccCChh---HHHHHHHHh
Q 037144 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCAT-VGTTAITAVDPLK---PLCDVAKQF 262 (502)
Q Consensus 187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t-~gtt~~G~idpl~---eI~~i~~~~ 262 (502)
.+...++..|+ +++.||++++ .+|+++|++++++.+ .+++++ .++|+||.+-+.+ +|.++|+++
T Consensus 177 ~~~~~~~~~g~---~~~~v~~~~~---g~~~~~l~~~~~~~~------k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~ 244 (431)
T PRK15481 177 SSINMLRYAGF---SASPVSVDAE---GMQPEKLERALAQGA------RAVILTPRAHNPTGCSLSARRAAALRNLLARY 244 (431)
T ss_pred HHHHHHHHcCC---eEEeeccCCC---CCCHHHHHHHHhcCC------CEEEECCCCCCCCCccCCHHHHHHHHHHHHhc
Confidence 99999999999 9999999742 489999999986532 255555 8999999997765 999999999
Q ss_pred -CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144 263 -GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK 341 (502)
Q Consensus 263 -g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 341 (502)
++|+++|.+|+..... .....+.....--.+..+++|.++....+|+++. ++... ..+.....+...
T Consensus 245 ~~~~ii~De~Y~~~~~~--~~~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~-~~~~~-~~~~~~~~~~~~-------- 312 (431)
T PRK15481 245 PQVLVIIDDHFALLSSS--PYHSVIPQTTQRWALIRSVSKALGPDLRLAFVAS-DSATS-ARLRLRLNSGTQ-------- 312 (431)
T ss_pred CCceEEecCchhhhccC--CCCCCCcCCCCCEEEEeeeccccCCCceeEEEeC-CHHHH-HHHHHHHhcccc--------
Confidence 9999999999765421 1111111111112456679999996667787665 33332 222111011000
Q ss_pred ccccCCCcccccCCCCCCchHHHHHHHHh--c--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecC
Q 037144 342 EQEVGYKDWQITLCRRFRSLKLWVVIRNF--G--VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPS 417 (502)
Q Consensus 342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g--~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~ 417 (502)
....+..+++...+ | .+.+.+..+.+.+.++.+.+.|++. ++++..+.....+++.++..
T Consensus 313 ---------------~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~~~ 376 (431)
T PRK15481 313 ---------------WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLDTD 376 (431)
T ss_pred ---------------CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEECCCC
Confidence 01223334444443 2 1235677788888899999999887 67654344444444444211
Q ss_pred cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC---CEEEEEEEecCCCCcHHHHHHHHHH
Q 037144 418 AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG---GIYVLRFAAGNSMTMESHVRAAWTV 494 (502)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---g~~~lR~~~~~~~t~~~di~~~~~~ 494 (502)
..++.+.+.+.|..+.++..+. +..++|++++.. ++++++++++.
T Consensus 377 ------------------------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~~--~~~~i~~~~~~ 424 (431)
T PRK15481 377 ------------------------------SQATALTLAKSGWLVREGEAFGVSAPSHGLRITLSTL--NDAEINRLAAD 424 (431)
T ss_pred ------------------------------HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCCC--ChHHHHHHHHH
Confidence 2345666667788766554442 135899999753 46799999999
Q ss_pred HHHHHH
Q 037144 495 VQEHLE 500 (502)
Q Consensus 495 l~~~~~ 500 (502)
|.++..
T Consensus 425 l~~~~~ 430 (431)
T PRK15481 425 LHQALN 430 (431)
T ss_pred HHHHhc
Confidence 988754
No 170
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=5.6e-18 Score=170.82 Aligned_cols=283 Identities=12% Similarity=0.124 Sum_probs=190.3
Q ss_pred HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHHHHHHcCC
Q 037144 119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQKAAQIVGI 197 (502)
Q Consensus 119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~aa~~~Gl 197 (502)
.++.+++++.+|++.+ ..++|+|+++++..++.+... ++ +.|+++.++|..+...++..|+
T Consensus 60 ~~l~~~~a~~~g~~~~-------~I~~~~Gs~e~i~~~~~~~~~-----------~g~~~vli~~P~y~~y~~~~~~~G~ 121 (351)
T PRK01688 60 KAVIENYAAYAGVKPE-------QVLVSRGADEGIELLIRAFCE-----------PGKDAILYCPPTYGMYSVSAETIGV 121 (351)
T ss_pred HHHHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCCEEEEcCCCHHHHHHHHHHcCC
Confidence 4677889999999765 689999999988766655432 33 6788888999999999999999
Q ss_pred CCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh--CCEEEeecccccc
Q 037144 198 DRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGS 275 (502)
Q Consensus 198 g~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~--g~~lhVDaA~g~~ 275 (502)
+++.+|.++ ++.+|++++++++ +.+ .+|+++.++|+||.+-+.++|.++++.. +.++++|.||..+
T Consensus 122 ---~~~~v~~~~--~~~~d~~~l~~~~-~~~------~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f 189 (351)
T PRK01688 122 ---EIRTVPTLD--NWQLDLPAIADNL-DGV------KVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEF 189 (351)
T ss_pred ---EEEEeecCC--CCCCCHHHHHHhc-cCC------cEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhc
Confidence 999999874 4799999999887 232 3788889999999999888877776542 6899999999665
Q ss_pred cccCccchhhhcCCCCCC-eeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144 276 ACICPEFRHFIDGVECVD-SFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT 353 (502)
Q Consensus 276 ~~~~~~~~~~~~~~~~aD-si~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 353 (502)
... +.....+.. ... .+.-+++|+++.| ..+|+++. ++..+........+|-
T Consensus 190 ~~~-~s~~~~~~~--~~n~iv~rSfSK~~glaGlRiGy~i~-~~~~i~~l~~~~~~~~---------------------- 243 (351)
T PRK01688 190 CPQ-ASLAGWLAE--YPHLVILRTLSKAFALAGLRCGFTLA-NEEVINLLLKVIAPYP---------------------- 243 (351)
T ss_pred CCC-CChHHHHhh--CCCEEEEecchHhhcCHHHHHhHHhC-CHHHHHHHHhccCCCC----------------------
Confidence 311 111122211 112 4556799988744 45677765 3333322111111110
Q ss_pred CCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCC
Q 037144 354 LCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNG 430 (502)
Q Consensus 354 ~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 430 (502)
. ..+...++...+ +.+.+.+.++...+.++++.+.|+++++++.+.++..+.+.+++.+
T Consensus 244 v----~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~~-------------- 305 (351)
T PRK01688 244 L----STPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFTA-------------- 305 (351)
T ss_pred C----CHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCC--------------
Confidence 0 111122222232 2356677778888889999999999888764556666666665531
Q ss_pred CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE-CCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144 431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV-GGIYVLRFAAGNSMTMESHVRAAWTVVQ 496 (502)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lR~~~~~~~t~~~di~~~~~~l~ 496 (502)
..++.+.|.++|.++..+... +...++|+++. +.+++++++++|+
T Consensus 306 -----------------~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~----~~~e~~~l~~al~ 351 (351)
T PRK01688 306 -----------------SSAVFKSLWDQGIILRDQNKQPGLSNCLRITIG----TREECQRVIDALR 351 (351)
T ss_pred -----------------HHHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC----CHHHHHHHHHhhC
Confidence 245677777788765544333 22468999986 4579999998873
No 171
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.80 E-value=2.6e-17 Score=168.06 Aligned_cols=220 Identities=12% Similarity=0.160 Sum_probs=154.6
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|...++|+. +++++|.+. ..++++|+.++..++.+... +++.|+++...|.+..
T Consensus 63 ~~p~~~~Le~~----lA~l~G~~~---------~~~~~sG~~Ai~~~l~~~l~-----------~Gd~Vl~~~~~y~~~~ 118 (398)
T PRK07504 63 SNPTVDMFEKR----MCALEGAED---------ARATASGMAAVTAAILCQVK-----------AGDHVVAARALFGSCR 118 (398)
T ss_pred CCchHHHHHHH----HHHHhCCCe---------eeEecCHHHHHHHHHHHHhC-----------CCCEEEEcCCchhHHH
Confidence 34555666654 778888865 35677888888766654322 6778888887776533
Q ss_pred ----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 ----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
..+...|+ +++.++ .+|+++++++|++++ .+|+++.++|++|.+-|+++|.++|+++|++
T Consensus 119 ~~~~~~~~~~G~---~v~~vd-------~~d~e~l~~ai~~~t------klV~lesp~NptG~v~dl~~I~~la~~~gi~ 182 (398)
T PRK07504 119 YVVETLLPRYGI---ESTLVD-------GLDLDNWEKAVRPNT------KVFFLESPTNPTLEVIDIAAVAKIANQAGAK 182 (398)
T ss_pred HHHHHHHhhcCe---EEEEEC-------CCCHHHHHHhcCcCc------eEEEEECCCCCCcEecCHHHHHHHHHHcCCE
Confidence 33455687 777774 368999999987654 3899999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE 344 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 344 (502)
++||++|+.+....+. .. ++|.++.++||+++++. ..|.+++.++..+...+. .++..
T Consensus 183 lvvD~a~a~~~~~~~~--~~-----gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~---~~~~~----------- 241 (398)
T PRK07504 183 LVVDNVFATPLFQKPL--EL-----GAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQ---DYFRH----------- 241 (398)
T ss_pred EEEECCccccccCCch--hh-----CCCEEEeeccccccCCccceEEEEEeCcHHHHHHHH---HHHHH-----------
Confidence 9999999765443221 11 78999999999998764 345445544443322110 11111
Q ss_pred cCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 345 VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
.+.......+|.+++ |.+.+..++++..+++.++.+.|++.|+++-
T Consensus 242 ---------~g~~~s~~~A~~~l~--~L~tl~~R~~~~~~na~~la~~L~~~p~v~~ 287 (398)
T PRK07504 242 ---------TGPSLSPFNAWTLLK--GLETLPVRVRQQTESAAAIADFLAGHPKVAR 287 (398)
T ss_pred ---------hCCCCCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHcCCCccE
Confidence 111234566666665 4567888999999999999999999998763
No 172
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.80 E-value=3e-17 Score=167.26 Aligned_cols=220 Identities=15% Similarity=0.193 Sum_probs=156.0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|...++| +.+++++|.+ ..++++||++|+..++.+... +++.|+++...|.+..
T Consensus 59 ~~p~~~~le----~~la~l~g~~---------~~v~~ssG~~Ai~~al~al~~-----------~Gd~Vi~~~~~y~~t~ 114 (390)
T PRK08133 59 TNPTVTMFQ----ERLAALEGAE---------ACVATASGMAAILAVVMALLQ-----------AGDHVVSSRSLFGSTV 114 (390)
T ss_pred CChHHHHHH----HHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEccCcchhHH
Confidence 344444444 5577888865 368899999999877765532 5778888888876533
Q ss_pred ----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 ----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
+.+...|+ +++.++++ |+++++++|++.+ .+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 115 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i~~~t------klV~ie~p~NptG~v~dl~~I~~la~~~gi~ 178 (390)
T PRK08133 115 SLFEKIFARFGI---ETTFVDLT-------DLDAWRAAVRPNT------KLFFLETPSNPLTELADIAALAEIAHAAGAL 178 (390)
T ss_pred HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhcCcCC------eEEEEECCCCCCCCcCCHHHHHHHHHHcCCE
Confidence 45567888 88888763 7889999887644 3788889999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE 344 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 344 (502)
+++|++|+.+....| . . .++|.++.++||+++++.. .|.+++.++..+.... .++..
T Consensus 179 livD~t~~~~~~~~p-l-~-----~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~----~~~~~----------- 236 (390)
T PRK08133 179 LVVDNCFCTPALQQP-L-K-----LGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVF----GFLRT----------- 236 (390)
T ss_pred EEEECCCcccccCCc-h-h-----hCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHH----HHHHH-----------
Confidence 999999876544322 1 1 1689999999999986643 4444444443322111 11111
Q ss_pred cCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 345 VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
.+.....+..|..++ |.+.+..++++..+++..+.+.|++.|+++-+
T Consensus 237 ---------~g~~~~~~~a~~~l~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v 283 (390)
T PRK08133 237 ---------AGPTLSPFNAWVFLK--GLETLSLRMEAHSANALALAEWLEAHPGVERV 283 (390)
T ss_pred ---------hCCCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence 011123445666554 55678889999999999999999999988754
No 173
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=4.7e-17 Score=167.17 Aligned_cols=241 Identities=13% Similarity=0.118 Sum_probs=160.0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
.+|...++|+. ++++.|... .++|++||+|+.+++.+... +++.|+++...|.+..
T Consensus 62 ~~p~~~~le~~----lA~l~g~~~---------av~~sSGt~Al~~al~~ll~-----------~Gd~Vi~~~~~y~~t~ 117 (433)
T PRK08134 62 SNPTVAVLEER----VAALEGGVG---------AIATASGQAALHLAIATLMG-----------AGSHIVASSALYGGSH 117 (433)
T ss_pred cChHHHHHHHH----HHHHhCCCc---------EEEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCccHHHH
Confidence 45666666655 677777643 58899999999877765522 5778889988887654
Q ss_pred HHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 KAA----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ~aa----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
... ...|+ +++.++++ |+++|+++|+++++ +|++.++++++|.+.|+++|+++|+++|++
T Consensus 118 ~~~~~~l~~~Gi---~v~~vd~~-------d~~~l~~~i~~~Tk------lV~~e~~~np~g~v~Di~~I~~la~~~gi~ 181 (433)
T PRK08134 118 NLLHYTLRRFGI---ETTFVKPG-------DIDGWRAAIRPNTR------LLFGETLGNPGLEVLDIPTVAAIAHEAGVP 181 (433)
T ss_pred HHHHHHHhhCCe---EEEEECCC-------CHHHHHHhcCCCCe------EEEEECCCcccCcccCHHHHHHHHHHcCCE
Confidence 443 44788 88888763 78999999987654 788888999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCchhh-hh--hh-cCCcccccCccCCCCC
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPSCL-LS--TL-STNPQYLKNEATDQEP 340 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~~l-~~--~~-~~~~~yl~~~~~~~~~ 340 (502)
++||++++.+....| . .. ++|.++.+.|||++.+.. .|.+++...... .. .+ ...+.........
T Consensus 182 livD~t~a~~~~~~p-l-~~-----GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~--- 251 (433)
T PRK08134 182 LLVDSTFTTPYLLRP-F-EH-----GADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMV--- 251 (433)
T ss_pred EEEECCCcccccCCc-h-hc-----CCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccc---
Confidence 999999987765433 2 11 899999999999987643 455555322110 00 00 0000000000000
Q ss_pred cccccCCCc--------ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 341 KEQEVGYKD--------WQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 341 ~~~~~~~~~--------~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
......... .....+....+..+|..++ |.+.+..++++..+++..+.+.|+++|.++-+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~--gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V 319 (433)
T PRK08134 252 FAEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQ--GIETLPLRMERHVANTRKVVAFLASHPAVARV 319 (433)
T ss_pred hhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 000000000 0011122234455565554 66778999999999999999999999987644
No 174
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=4.3e-17 Score=165.78 Aligned_cols=289 Identities=11% Similarity=0.083 Sum_probs=189.7
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR 199 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~ 199 (502)
.+++++++++|++.+ ..++|+|+++++...+.+... +++.|++....|..+...++..|+
T Consensus 75 ~lr~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~vli~~P~y~~~~~~~~~~g~-- 134 (371)
T PRK05166 75 ALREAIAARTGVPAD-------RIILGNGSEDLIAVICRAVLR-----------PGDRVVTLYPSFPLHEDYPTMMGA-- 134 (371)
T ss_pred HHHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC--
Confidence 355667778888654 689999998887655544322 677888888899888889999999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH--hCCEEEeecccccccc
Q 037144 200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGSAC 277 (502)
Q Consensus 200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~--~g~~lhVDaA~g~~~~ 277 (502)
+++.+|++. ++.+|+++|++++++.++ +|+++.++|+||.+-|.+++.++++. .++++++|.+|+.+..
T Consensus 135 -~~~~v~~~~--~~~~~~~~l~~~~~~~~~------~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~ 205 (371)
T PRK05166 135 -RVERVTVTP--DLGFDLDALCAAVARAPR------MLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAA 205 (371)
T ss_pred -eEEEeecCC--CCCCCHHHHHHhhhcCCC------EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcC
Confidence 999999875 468999999998866432 67789999999999988777777764 4789999999976552
Q ss_pred cCccchhhhcCCC-CC--CeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144 278 ICPEFRHFIDGVE-CV--DSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT 353 (502)
Q Consensus 278 ~~~~~~~~~~~~~-~a--Dsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 353 (502)
.......+..+. .- -.+..++.|.++ .....|++++.++.... .+.....+..
T Consensus 206 -~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~-~~~~~~~~~~--------------------- 262 (371)
T PRK05166 206 -GDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVG-LLDRVRTPFN--------------------- 262 (371)
T ss_pred -CcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHH-HHHHhccCCC---------------------
Confidence 111111111111 11 245667999997 55667887766554432 2211110000
Q ss_pred CCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144 354 LCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTY 432 (502)
Q Consensus 354 ~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 432 (502)
...+...+++..+ ..+.+++.++...+.++++.+.|++. ++.+. ++..+.+.+.....
T Consensus 263 ----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-p~~g~fl~~~~~~~--------------- 321 (371)
T PRK05166 263 ----VNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM-GYRIA-PSRANFLFFDARRP--------------- 321 (371)
T ss_pred ----CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-cCeeC-CCcCCEEEEeCCCC---------------
Confidence 0222222333332 23557777788888889999999987 77753 55555544432211
Q ss_pred ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
..++.+.+.++|..+.++.......++|++++ +.++.+++.++|+++.+
T Consensus 322 ---------------~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~----~~~~~~~l~~~l~~i~~ 370 (371)
T PRK05166 322 ---------------ASAVAEALLRQGVIVKPWKQPGFETFIRVSIG----SPEENDHFVAALDKVLE 370 (371)
T ss_pred ---------------HHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHHhh
Confidence 24567777777865444332234679999987 34578888888877653
No 175
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.79 E-value=9.7e-17 Score=164.49 Aligned_cols=326 Identities=13% Similarity=0.083 Sum_probs=205.0
Q ss_pred HHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCC-CcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144 89 VAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGN-GGGVIQGTTCEALLCTLTAARDRVLKK 167 (502)
Q Consensus 89 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~-~~g~~t~ggt~a~~~al~~a~~~~~~~ 167 (502)
+|..+.+.+...+. ....|....+..++.+.+.+|+.+.+|.+... .. ...++|+|+++++..++.+..+
T Consensus 42 ~~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~---~~~~~i~it~Ga~~al~~~~~~l~~----- 112 (393)
T TIGR03538 42 TPAFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRFDLPTGV---DPERHVLPVNGTREALFAFAQAVIN----- 112 (393)
T ss_pred CCHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccC---CCCceEEECCCcHHHHHHHHHHHcC-----
Confidence 45556666665543 23456655667889999999999988875211 01 1478899999988776665443
Q ss_pred hCccCCCCe--EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144 168 IGRENISKL--VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245 (502)
Q Consensus 168 ~~~~~~~~~--~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~ 245 (502)
+++ .|+++.+.+..+...++..|+ +++.+|+++++++.+|+++|++++.+++ .+|+++.++|+
T Consensus 113 ------~gd~~~vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~~p~NP 177 (393)
T TIGR03538 113 ------PGQAPLVVMPNPFYQIYEGAALLAGA---EPYFLNCTAENGFLPDFDAVPESVWRRC------QLLFVCSPGNP 177 (393)
T ss_pred ------CCCcceEEecCCCCcchHHHHHhcCC---eEEEeeccccCCCCCCHHHHHHHHhhcc------eEEEEeCCCCC
Confidence 343 478888888888888999999 9999999755457899999999886543 36777899999
Q ss_pred ccccCC---hhHHHHHHHHhCCEEEeecccccccccCc-cchh---hhcCCC--CCC--eeEEccCCc-CCCCCcceEEE
Q 037144 246 ITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICP-EFRH---FIDGVE--CVD--SFSFNPHKW-LFTTLDCCCLW 313 (502)
Q Consensus 246 ~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~-~~~~---~~~~~~--~aD--si~~~~hK~-l~~p~~~g~~~ 313 (502)
||.+-+ +++|+++|++||+++++|.+|........ .... ...... ..+ .++.++.|. +.....+|+++
T Consensus 178 tG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i 257 (393)
T TIGR03538 178 TGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVA 257 (393)
T ss_pred cCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEe
Confidence 999855 88899999999999999999976543210 0000 011110 111 556779995 45667788876
Q ss_pred eeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHH
Q 037144 314 VKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERL 392 (502)
Q Consensus 314 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~ 392 (502)
.. +..+.. +.....+... ...++..++++..+. .+.+++..+.+.+.++.+.+.
T Consensus 258 ~~-~~l~~~-~~~~~~~~~~-----------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
T TIGR03538 258 GD-AEILKA-FLRYRTYHGC-----------------------AMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEI 312 (393)
T ss_pred cC-HHHHHH-HHHHHHhhcc-----------------------CcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 53 333222 2111111100 012233333344332 345666777778888888888
Q ss_pred HhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--
Q 037144 393 VTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG-- 469 (502)
Q Consensus 393 l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~-- 469 (502)
|++. +.+. .|..+.+.|.-.+.. ..++.+++.+ .|..+.++..+.
T Consensus 313 L~~~--~~~~-~p~gg~f~~~~~~~~-----------------------------~~~~~~~l~~~~gV~v~pg~~f~~~ 360 (393)
T TIGR03538 313 LGQV--LDLE-LPDAGFYLWPKVPGD-----------------------------DEAFARALYEEENVTVLPGRFLARE 360 (393)
T ss_pred HHhh--Cccc-CCCeeEEEEEECCCC-----------------------------HHHHHHHHHHHCCEEEeCCcccccc
Confidence 8764 3333 344444444332211 1345666544 476554443321
Q ss_pred ------CEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 470 ------GIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 470 ------g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
+..++|++++. ++++++.+++.|.+.
T Consensus 361 ~~~~~~~~~~~Ris~~~---~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 361 AEGVNPGEGRVRIALVA---PLEECVEAAERIRSF 392 (393)
T ss_pred ccCCCCCCCEEEEEecC---CHHHHHHHHHHHHHh
Confidence 24689999874 467899999888764
No 176
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.79 E-value=6.3e-17 Score=164.88 Aligned_cols=287 Identities=13% Similarity=0.059 Sum_probs=190.7
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR 199 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~ 199 (502)
++++++++.+|++.+ ..++|+|+++++..++.+..+ +++.|+++.+.+..+...++..|+
T Consensus 90 ~lr~~ia~~~~~~~~-------~I~~t~Ga~~~i~~~~~~~~~-----------~gd~Vlv~~P~y~~y~~~~~~~g~-- 149 (380)
T PLN03026 90 RLRAALAEDSGLESE-------NILVGCGADELIDLLMRCVLD-----------PGDKIIDCPPTFGMYVFDAAVNGA-- 149 (380)
T ss_pred HHHHHHHHHhCcChh-------hEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC--
Confidence 355667777887654 588999999988766554432 567888888888878888899999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHH-HHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccccc
Q 037144 200 KNIRAIKTTKSSSYGLSAESVLSQIN-LDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI 278 (502)
Q Consensus 200 ~~v~~v~~~~~~~~~~d~~~Le~~i~-~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~ 278 (502)
+++.+|.+. ++.+|+++|++++. +. +.+|+++.++|+||.+-|.+++.++++.. +|+++|.+|..+...
T Consensus 150 -~~~~v~~~~--~~~~d~~~l~~~~~~~~------~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~ 219 (380)
T PLN03026 150 -EVIKVPRTP--DFSLDVPRIVEAVETHK------PKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQ 219 (380)
T ss_pred -EEEEeecCC--CCCcCHHHHHHHHhccC------CcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCC
Confidence 999999864 57899999999883 33 23788889999999999999999999865 999999999654321
Q ss_pred CccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC
Q 037144 279 CPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR 357 (502)
Q Consensus 279 ~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~ 357 (502)
......+... .-..+..+++|.++ .....|+++. ++..+.........|-
T Consensus 220 -~~~~~~~~~~-~~viv~~SfSK~~glaGlRiGy~~~-~~~~i~~l~~~~~~~~-------------------------- 270 (380)
T PLN03026 220 -ESRMKWVKKY-DNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYN-------------------------- 270 (380)
T ss_pred -cchHHHHHhC-CCEEEEecchHhhcCccccceeeec-CHHHHHHHHHhcCCCC--------------------------
Confidence 1111111110 12356678999997 4556777765 3333322111111110
Q ss_pred CCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCccccc
Q 037144 358 FRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYR 436 (502)
Q Consensus 358 ~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 436 (502)
...+...++...+ ..+.+++..++..+.++++.+.|++++++++ .++..+.+.+.+.+. .
T Consensus 271 ~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~-~----------------- 331 (380)
T PLN03026 271 VSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVTSG-R----------------- 331 (380)
T ss_pred CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECCCC-C-----------------
Confidence 1223333334333 2345677778888889999999998865654 356666666665421 0
Q ss_pred ccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 437 QFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 437 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
+ ..++.+.|.++|..+.......+..++|++++ +.+++++++++|+++
T Consensus 332 --------~--~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~----~~~~~~~l~~al~~~ 379 (380)
T PLN03026 332 --------D--AKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG----KPEHTDALMEALKQL 379 (380)
T ss_pred --------C--HHHHHHHHHHCCeEEEECCCCCCCCEEEEecC----CHHHHHHHHHHHHHh
Confidence 0 23567777777875443332334569999986 456899999998764
No 177
>PLN02271 serine hydroxymethyltransferase
Probab=99.79 E-value=4.3e-17 Score=166.63 Aligned_cols=301 Identities=11% Similarity=0.053 Sum_probs=187.5
Q ss_pred cccCCCCCCHHHHHHHHHHhhc-CCCCccc------ccChhhHHHHHHHHHHHHHhcCCCCc-cCcCCCCcE-EEcCCch
Q 037144 80 FAYFPATSSVAGIVGEMLSSGF-NVVGLDW------ISSPAAVELENIVMDWLGQMLDLPKS-FLFSGNGGG-VIQGTTC 150 (502)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~-n~~~~~~------~~~p~~~~le~~~~~~l~~l~g~~~~-~~~~~~~~g-~~t~ggt 150 (502)
+..+++-+.+...+.+.+.+.+ |.+.-+| .......++|..+++...++||++.. | +. +-.-+|+
T Consensus 151 l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~------gaNVQp~SGs 224 (586)
T PLN02271 151 IELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKW------GVNVQPYSCT 224 (586)
T ss_pred eeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCccccc------ccceeeccHH
Confidence 3344444433444444444433 4333332 34445678999999999999998752 2 22 3334889
Q ss_pred HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCC---CchhHH------HHHHHcCCCCCCEEEEe--cCCCCCcccCHHH
Q 037144 151 EALLCTLTAARDRVLKKIGRENISKLVVYSSDQ---THCAFQ------KAAQIVGIDRKNIRAIK--TTKSSSYGLSAES 219 (502)
Q Consensus 151 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~---~H~s~~------~aa~~~Glg~~~v~~v~--~~~~~~~~~d~~~ 219 (502)
.||+.++.+... |++.|+..+. +|.+.- +.+...|+ .+..+| +++ .++.+|.++
T Consensus 225 ~AN~aV~~ALl~-----------PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~---~~~~vpY~~d~-~~g~IDyd~ 289 (586)
T PLN02271 225 SANFAVYTGLLL-----------PGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASI---FFESLPYKVNP-QTGYIDYDK 289 (586)
T ss_pred HHHHHHHHHhcC-----------CCCEEEEecCCCCCchhcccccccccccccccc---eEEEEEccccc-ccCccCHHH
Confidence 999877766543 7788887544 455543 23455676 666666 543 357999999
Q ss_pred HHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcc
Q 037144 220 VLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNP 299 (502)
Q Consensus 220 Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~ 299 (502)
|++..... +|.+|++.+..++ ..-|+++|+++|+++|++++||+||..+.+....+... +..+|+++.+.
T Consensus 290 lek~a~~~-----rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP---~~~aDvvt~TT 359 (586)
T PLN02271 290 LEEKALDF-----RPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNP---FDYCDIVTSTT 359 (586)
T ss_pred HHHHhhhc-----CCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCC---CcCCcEEEeCC
Confidence 99855332 2567777554444 67899999999999999999999999988765543222 23799999999
Q ss_pred CCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCC-CCCcccccCCC-cccccCCCCCC-chHHHHHHHHhcHHHHH
Q 037144 300 HKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATD-QEPKEQEVGYK-DWQITLCRRFR-SLKLWVVIRNFGVANLR 376 (502)
Q Consensus 300 hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~-~~~~~~~~~~~-~~~~~~sr~~~-al~~~~~l~~~g~~g~~ 376 (502)
||||.+|.| |++++++... ..... ......... .+.....++.. -.+++++-... ..++..+++......+.
T Consensus 360 HKtLrGPrG-G~I~~r~~~~--~~~~g--~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk 434 (586)
T PLN02271 360 HKSLRGPRG-GIIFYRKGPK--LRKQG--MLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYK 434 (586)
T ss_pred cccCCCCCc-eEEEeccccc--ccccC--CccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHH
Confidence 999999998 8888765421 00000 000000000 00000001110 01344443322 24555667665566778
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecC
Q 037144 377 NFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPS 417 (502)
Q Consensus 377 ~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~ 417 (502)
+..++..++|+.|.+.|.+. |++++.. .+..+|.+.+.+.
T Consensus 435 ~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggTdnHlvLvDl~~~ 475 (586)
T PLN02271 435 AYMQQVKKNAQALASALLRR-KCRLVTGGTDNHLLLWDLTTL 475 (586)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCeEeeCCCCcceeeecCccc
Confidence 99999999999999999887 8999853 2345666665543
No 178
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.79 E-value=1.6e-16 Score=161.40 Aligned_cols=316 Identities=13% Similarity=0.034 Sum_probs=204.9
Q ss_pred HHHHHHHHHHhhcCC---CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 037144 89 VAGIVGEMLSSGFNV---VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL 165 (502)
Q Consensus 89 ~~~~~~~~l~~~~n~---~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~ 165 (502)
+|..+.+.+...+.. ....|. .++...+.+.+.+|+.+.+|.+-.. ...++|+|+++++...+.+..+
T Consensus 40 ~~~~~~~al~~~l~~~~~~~~~Y~-~~g~~~lr~aia~~~~~~~~~~~~~-----~~I~it~G~~~~l~~~~~~~~~--- 110 (368)
T PRK03317 40 PSPALVADIAEAVAEAAAGLNRYP-DRDAVALRADLAAYLTAQTGVGLTV-----ENVWAANGSNEILQQLLQAFGG--- 110 (368)
T ss_pred CCHHHHHHHHHHHhhhhhhhccCC-CCchHHHHHHHHHHhhhhccCCCCh-----hhEEECCCHHHHHHHHHHHhcC---
Confidence 344455555444321 223443 3466789999999999988764221 2688999999888776665543
Q ss_pred HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144 166 KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245 (502)
Q Consensus 166 ~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~ 245 (502)
+++.|++..+++..+..+++..|+ +++.++.+. ++.+|+++|++++++.. +.+|+++.++|+
T Consensus 111 --------~gd~v~v~~P~y~~~~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~~~~~~-----~~~i~l~~p~NP 172 (368)
T PRK03317 111 --------PGRTALGFVPSYSMHPIIARGTHT---EWVEGPRAA--DFTLDVDAAVAAIAEHR-----PDVVFLTSPNNP 172 (368)
T ss_pred --------CCCEEEEeCCChHHHHHHHHhcCC---eeEEcccCC--CCCCCHHHHHHHHhccC-----CCEEEEeCCCCC
Confidence 677788888899889899998888 888887653 46899999999986421 226777889999
Q ss_pred ccccCChhHHHHHHHHhCCEEEeecccccccccC-ccchhhhcCCCCCCe-eEEccCCcCCC-CCcceEEEeeCchhhhh
Q 037144 246 ITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIC-PEFRHFIDGVECVDS-FSFNPHKWLFT-TLDCCCLWVKDPSCLLS 322 (502)
Q Consensus 246 ~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~-~~~~~~~~~~~~aDs-i~~~~hK~l~~-p~~~g~~~~r~~~~l~~ 322 (502)
||.+-+.+++.++|+.+++++++|.+|+.+.... +........ .-+. ++.++.|.++. ...+|+++. ++... +
T Consensus 173 tG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~g~~GlRiG~~~~-~~~~~-~ 248 (368)
T PRK03317 173 TGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPE--YPRLVVSRTMSKAFAFAGGRLGYLAA-APAVV-D 248 (368)
T ss_pred CCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHh--CCCEEEEEechhhhccchhhhhhhhC-CHHHH-H
Confidence 9999999999999999999999999998653211 111111111 1244 44579999974 456677765 33332 2
Q ss_pred hhcC-CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144 323 TLST-NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFE 400 (502)
Q Consensus 323 ~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~ 400 (502)
.+.. ...|- ..++...++...+. .+.+.+.+++..+.++++.+.|++. |++
T Consensus 249 ~l~~~~~~~~--------------------------~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 301 (368)
T PRK03317 249 ALRLVRLPYH--------------------------LSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL-GLR 301 (368)
T ss_pred HHHhcCCCCC--------------------------CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCE
Confidence 2221 10110 01233333333331 2345556667778888888999887 787
Q ss_pred EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecC
Q 037144 401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGN 480 (502)
Q Consensus 401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~ 480 (502)
+. ++..+++.|...+. ...+.+.+.++|..+. +. ....++|++++
T Consensus 302 ~~-~~~~~~~~~~~~~~------------------------------~~~~~~~l~~~Gv~v~-~~--~~~~~iRi~~~- 346 (368)
T PRK03317 302 VA-PSDANFVLFGRFAD------------------------------RHAVWQGLLDRGVLIR-DV--GIPGWLRVTIG- 346 (368)
T ss_pred eC-CCCCcEEEEeccCC------------------------------HHHHHHHHHHCCEEEE-eC--CCCCeEEEecC-
Confidence 65 55566655522111 2356677777786543 32 23468999975
Q ss_pred CCCcHHHHHHHHHHHHHHHH
Q 037144 481 SMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 481 ~~t~~~di~~~~~~l~~~~~ 500 (502)
+.+++++++++|+++.+
T Consensus 347 ---~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 347 ---TPEENDAFLAALAEVLA 363 (368)
T ss_pred ---CHHHHHHHHHHHHHHHH
Confidence 45689999999988764
No 179
>PLN02509 cystathionine beta-lyase
Probab=99.79 E-value=3.5e-17 Score=168.47 Aligned_cols=216 Identities=14% Similarity=0.192 Sum_probs=153.6
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH----HH
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK----AA 192 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~----aa 192 (502)
..+++.++++++.|.+ ..++++||+.++ .++..... +++.|+++...|.+..+ .+
T Consensus 134 t~~aLE~~lA~leg~e---------~ai~~~SG~aAi-~~il~ll~-----------~GD~VI~~~~~y~~t~~ll~~~l 192 (464)
T PLN02509 134 TRDALESLLAKLDKAD---------RAFCFTSGMAAL-SAVTHLIK-----------NGEEIVAGDDVYGGSDRLLSQVV 192 (464)
T ss_pred HHHHHHHHHHHHhCCC---------EEEEeCcHHHHH-HHHHHHhC-----------CCCEEEEcCCchhhHHHHHHHHH
Confidence 4556667788888754 356667777654 33333221 67888899889877653 34
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
...|+ +++.++. .|+++++++|++++ .+|+++.++|++|.+.||++|+++|+++|++++||+||
T Consensus 193 ~~~G~---~v~~vd~-------~d~e~l~~ai~~~T------klV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~ 256 (464)
T PLN02509 193 PRSGV---VVKRVNT-------TNLDEVAAAIGPQT------KLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSI 256 (464)
T ss_pred HHCCe---EEEEeCC-------CCHHHHHHhCCcCC------eEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCc
Confidence 56688 7877753 37889999886544 38899999999999999999999999999999999999
Q ss_pred ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcc
Q 037144 273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDW 350 (502)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 350 (502)
+.+....+ .. .++|.++++++||++++.+ .|+++++++....... .+...
T Consensus 257 a~~~~~~p-l~------~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~-----~~~~~---------------- 308 (464)
T PLN02509 257 MSPVLSRP-LE------LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVY-----FLQNS---------------- 308 (464)
T ss_pred cccccCCh-hh------cCCcEEEecCcccccCCCccceeEEEeccHHHHHHHH-----HHHHh----------------
Confidence 77654322 11 2799999999999998776 6777766654322110 01000
Q ss_pred cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 351 QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 351 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
.+....+..+|..++ |.+-+..++++..++++++.+.|+++|.++-+
T Consensus 309 ---~g~~l~p~~A~l~lr--~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V 355 (464)
T PLN02509 309 ---EGSGLAPFDCWLCLR--GIKTMALRIEKQQENARKIAMYLSSHPRVKKV 355 (464)
T ss_pred ---cCCCcCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhcCCCccEE
Confidence 011124455666665 45778889999999999999999999988643
No 180
>PLN02242 methionine gamma-lyase
Probab=99.79 E-value=7.9e-17 Score=165.09 Aligned_cols=224 Identities=13% Similarity=0.115 Sum_probs=152.5
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|...++|+. +++++|.+. .++++||++|+..++.+... +++.|+++...+....
T Consensus 74 ~~Pt~~~LE~~----lA~l~g~~~---------~l~~~sG~~Ai~~al~al~~-----------~GD~Vl~~~~~Y~~~~ 129 (418)
T PLN02242 74 FNPTVLNLGRQ----MAALEGTEA---------AYCTASGMSAISSVLLQLCS-----------SGGHVVASNTLYGGTH 129 (418)
T ss_pred CChhHHHHHHH----HHHHhCCCe---------EEEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHH
Confidence 45666666655 778888753 57899999999888776643 6778888887776555
Q ss_pred HHH-----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCC
Q 037144 190 KAA-----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI 264 (502)
Q Consensus 190 ~aa-----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~ 264 (502)
..+ +..|+ +++.++. .|+++|+++|++. ++.+|+++.++|++|.+.|+++|+++|+++|+
T Consensus 130 ~~~~~~~~~~~G~---~~~~~d~-------~d~e~l~~~i~~~-----~tklV~lesp~NPtG~v~dl~~I~~la~~~gi 194 (418)
T PLN02242 130 ALLAHFLPRKCNI---TTTFVDI-------TDLEAVKKAVVPG-----KTKVLYFESISNPTLTVADIPELARIAHEKGV 194 (418)
T ss_pred HHHHHhhhhccCc---eEEEcCC-------CCHHHHHHhcCcC-----CCEEEEEecCCCCCCcccCHHHHHHHHHHhCC
Confidence 443 34666 6666653 2889999988652 13488899999999999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc-eEEEeeCchhhhhhhcCCcc-cccCccCCCCCcc
Q 037144 265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC-CCLWVKDPSCLLSTLSTNPQ-YLKNEATDQEPKE 342 (502)
Q Consensus 265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~-g~~~~r~~~~l~~~~~~~~~-yl~~~~~~~~~~~ 342 (502)
+++||.+|+.+. ..+ ... ++|+++.+++|+++++... |.+++.++..+......... +..
T Consensus 195 ~livDea~~~~~-~~~--~~~-----g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~---------- 256 (418)
T PLN02242 195 TVVVDNTFAPMV-LSP--ARL-----GADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALML---------- 256 (418)
T ss_pred EEEEECCCCccC-CCH--HHc-----CCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhc----------
Confidence 999999996432 211 111 5899999999999877543 33344444433322111100 000
Q ss_pred cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 037144 343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP 404 (502)
Q Consensus 343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~ 404 (502)
.+....+..+|..+ .+...+..+++++.++++++.+.|+++ ++++..|
T Consensus 257 -----------~g~~~~~~~A~l~~--~~l~tl~~r~~~~~~~a~~la~~L~~~-~~~V~yP 304 (418)
T PLN02242 257 -----------LGPTMNPKVAFELS--ERLPHLSLRMKEHCRRAMEYAKRMKEL-GLKVIYP 304 (418)
T ss_pred -----------cCCCCCHHHHHHHH--cCCCcHHHHHHHHHHHHHHHHHHHHhC-CCEEECC
Confidence 01112333444444 355577788899999999999999998 5777643
No 181
>PRK09148 aminotransferase; Validated
Probab=99.79 E-value=1.2e-16 Score=164.17 Aligned_cols=330 Identities=12% Similarity=0.049 Sum_probs=203.6
Q ss_pred HHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCcc
Q 037144 93 VGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRE 171 (502)
Q Consensus 93 ~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~ 171 (502)
+.+.+...++ .....|....+..++.+.+.+|+.+.+|.+-.. ....++|+|+++++..++.+..+
T Consensus 48 ~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~I~it~G~~~al~~~~~~l~~--------- 114 (405)
T PRK09148 48 IVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNP----DTQVVATLGSKEGFANMAQAITA--------- 114 (405)
T ss_pred HHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEcCChHHHHHHHHHHhcC---------
Confidence 3333444443 223456665667889999999999888864211 01589999999988776655433
Q ss_pred CCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC
Q 037144 172 NISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP 251 (502)
Q Consensus 172 ~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp 251 (502)
+++.|+++.++|..+...+...|+ +++.+|++.++. ++++++++++... .++.+|+.+.++|+||.+-+
T Consensus 115 --~gd~Vl~~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~---~~~~l~~~~~~~~---~~~~~v~l~~P~NPtG~~~s 183 (405)
T PRK09148 115 --PGDVILCPNPSYPIHAFGFIMAGG---VIRSVPAEPDEE---FFPALERAVRHSI---PKPIALIVNYPSNPTAYVAD 183 (405)
T ss_pred --CCCEEEEcCCCCcccHHHHHhcCC---EEEEEeCCCCCC---CccCHHHHHhhcc---ccceEEEEeCCCCCCCcCCC
Confidence 677888899999888888899999 999999975433 3455666554321 12458888999999999976
Q ss_pred h---hHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhc
Q 037144 252 L---KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLS 325 (502)
Q Consensus 252 l---~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~ 325 (502)
. ++|.++|++||+++++|.+|+...+........ +.+......+..+++|.++.| ..+|+++. ++..+. .+.
T Consensus 184 ~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~-~~~~i~-~l~ 261 (405)
T PRK09148 184 LDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG-NERLIA-ALT 261 (405)
T ss_pred HHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeC-CHHHHH-HHH
Confidence 5 678889999999999999997654321111111 111112224467899999744 56777764 443332 222
Q ss_pred CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144 326 TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF 403 (502)
Q Consensus 326 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~ 403 (502)
....++... ...+...++...+ +.+.+++..+.+.++++++.+.|++. ++.+.
T Consensus 262 ~~~~~~~~~-----------------------~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~- 316 (405)
T PRK09148 262 RVKSYLDYG-----------------------AFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA-GWDIP- 316 (405)
T ss_pred HHHHHhccC-----------------------CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCccC-
Confidence 111111100 0122222333333 34556677778888899999999886 67654
Q ss_pred CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEEEecC
Q 037144 404 PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRFAAGN 480 (502)
Q Consensus 404 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~ 480 (502)
+|..+++.|.-.+.... .. + ..++.+.+. +.|..+.++..+. +..++|+++.
T Consensus 317 ~p~~g~f~~~~l~~~~~--------------------~~--~--~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~- 371 (405)
T PRK09148 317 PPAASMFAWAPIPEAFR--------------------HL--G--SLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV- 371 (405)
T ss_pred CCCeeEEEEEECCCccC--------------------CC--C--HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-
Confidence 45555444433232110 00 0 134555554 4576555544443 2479999986
Q ss_pred CCCcHHHHHHHHHHHHHHHH
Q 037144 481 SMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 481 ~~t~~~di~~~~~~l~~~~~ 500 (502)
.+.++++++++.|.++..
T Consensus 372 --~~~~~l~~al~~l~~~l~ 389 (405)
T PRK09148 372 --ENEQRIRQAARNIKRFLS 389 (405)
T ss_pred --CCHHHHHHHHHHHHHHHH
Confidence 356788888888877654
No 182
>PRK08175 aminotransferase; Validated
Probab=99.79 E-value=3.9e-16 Score=160.11 Aligned_cols=318 Identities=14% Similarity=0.094 Sum_probs=199.7
Q ss_pred CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC
Q 037144 105 GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT 184 (502)
Q Consensus 105 ~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 184 (502)
...|....+..++++.+.+|+.+.+|.+-.. ....++|+|+++++...+....+ +++.|+++.+.
T Consensus 60 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~i~~t~G~~~~l~~~~~~~~~-----------~gd~Vlv~~P~ 124 (395)
T PRK08175 60 THGYSTSRGIPRLRRAISRWYQDRYDVDIDP----ESEAIVTIGSKEGLAHLMLATLD-----------HGDTVLVPNPS 124 (395)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEccCcHHHHHHHHHHhCC-----------CCCEEEEcCCC
Confidence 4456666677899999999999887864221 01478899988887654443322 67789999999
Q ss_pred chhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCCh---hHHHHHHHH
Q 037144 185 HCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPL---KPLCDVAKQ 261 (502)
Q Consensus 185 H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl---~eI~~i~~~ 261 (502)
|..+...++..|+ +++.+|++++ ..++++|++++++.. ..+.+|+++.++|+||.+-+. ++|+++|++
T Consensus 125 y~~~~~~~~~~g~---~~~~v~~~~~---~~~~~~l~~~l~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~ 195 (395)
T PRK08175 125 YPIHIYGAVIAGA---QVRSVPLVEG---VDFFNELERAIRESY---PKPKMMILGFPSNPTAQCVELEFFEKVVALAKR 195 (395)
T ss_pred CcchHHHHHHcCC---eEEEEecccC---CCcHHHHHHHHhhcc---CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 9888888889999 9999999753 345889998886421 123477778889999998666 799999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCC-CC--eeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCC
Q 037144 262 FGIWVHVDAAYAGSACICPEFRHFIDGVEC-VD--SFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATD 337 (502)
Q Consensus 262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~-aD--si~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~ 337 (502)
||+++++|.+|+.......... .+..+.. .| .++.++.|.++.| ..+|+++. ++.... .+.....+....
T Consensus 196 ~~i~ii~De~y~~l~~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~-~~~l~~-~~~~~~~~~~~~--- 269 (395)
T PRK08175 196 YDVLVVHDLAYADIVYDGWKAP-SIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG-NPELVS-ALARIKSYHDYG--- 269 (395)
T ss_pred cCcEEEEecchHhhccCCCCCc-chhcCCCcccCEEEEeeccccccCcchhheeeeC-CHHHHH-HHHHHHhhcccC---
Confidence 9999999999976543111111 1111111 23 4567899999755 44676654 444332 221111111000
Q ss_pred CCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEee
Q 037144 338 QEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT 415 (502)
Q Consensus 338 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~ 415 (502)
. ......++...+ ....+++..+++.+.++++.+.|++. ++.+..+.....++++++
T Consensus 270 -----------------~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~~i~i~l~ 328 (395)
T PRK08175 270 -----------------T---FTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASMYVWAKIP 328 (395)
T ss_pred -----------------C---CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEEEEEEECC
Confidence 0 111112222222 24456677777888889999999887 676653334445555554
Q ss_pred cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHH
Q 037144 416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAW 492 (502)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~ 492 (502)
+. .. .. + ..++.+++. +.|..+.++..+. +..++|++++ .+++.+..++
T Consensus 329 ~~-~~--------------------~~--~--~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~---~~~~~~~~al 380 (395)
T PRK08175 329 EP-YA--------------------AM--G--SLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI---ENRDRIRQAI 380 (395)
T ss_pred cc-cC--------------------CC--C--HHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC---CCHHHHHHHH
Confidence 31 00 00 0 235566555 4576544443332 3468999985 3567899999
Q ss_pred HHHHHHHHh
Q 037144 493 TVVQEHLEA 501 (502)
Q Consensus 493 ~~l~~~~~~ 501 (502)
+.|.++.++
T Consensus 381 ~~l~~~l~~ 389 (395)
T PRK08175 381 RGIKAMFRA 389 (395)
T ss_pred HHHHHHHHh
Confidence 999887764
No 183
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.79 E-value=1.1e-16 Score=160.23 Aligned_cols=331 Identities=16% Similarity=0.052 Sum_probs=191.8
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCcc
Q 037144 56 VETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSF 135 (502)
Q Consensus 56 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~ 135 (502)
.+..++.+++.+..+-... --.|+|.-.. +.......+.+..+ + +...+++++.+.+++++|.+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~-~~~ylgl~~~-~~~~~~~~~~~~~~----~-------g~~~~~~~Le~~lA~~~g~~~e- 72 (346)
T TIGR03576 7 REKALEIIREKISRGGRDS-LYDLTGLAGG-FKIDEEDLELLETY----V-------GPAIFEEKVQELGREHLGGPEE- 72 (346)
T ss_pred HHHHHHHHHHHHhccCCcc-ccccccCCCC-hhHHHHHHHHHHHh----c-------CCHHHHHHHHHHHHHHcCCCcc-
Confidence 4567777887765553211 1246666432 22222233333332 1 2347888888999999999654
Q ss_pred CcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeC---CCCchhHHHHHHHcCCCCCCEEEEecCCCCC
Q 037144 136 LFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS---DQTHCAFQKAAQIVGIDRKNIRAIKTTKSSS 212 (502)
Q Consensus 136 ~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s---~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~ 212 (502)
..++++||+++|..++.+..+ +++.|++. ...|.++..++++.|. +++..
T Consensus 73 ------~ilv~~gg~~a~~~~~~al~~-----------~gd~Vli~~~d~p~~~s~~~~~~l~ga---~~~~~------- 125 (346)
T TIGR03576 73 ------KILVFNRTSSAILATILALEP-----------PGRKVVHYLPEKPAHPSIPRSCKLAGA---EYFES------- 125 (346)
T ss_pred ------eEEEECCHHHHHHHHHHHhCC-----------CCCEEEECCCCCCCchhHHHHHHHcCC---EEecc-------
Confidence 589999999999877766543 56666642 5699999999999998 65322
Q ss_pred cccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC
Q 037144 213 YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV 289 (502)
Q Consensus 213 ~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~ 289 (502)
.|+++|+. . . .+.+|++| |++++|.+ .||++|+++|++||+|++||.||+.+........... ..
T Consensus 126 --~~l~~l~~----~-~---~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~-~~ 193 (346)
T TIGR03576 126 --DELSELKK----I-D---GTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPAL-DL 193 (346)
T ss_pred --CCHHHHhh----C-c---CceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHH-Hc
Confidence 13444322 1 1 12355555 57889998 8999999999999999999999987643210111101 11
Q ss_pred CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHH
Q 037144 290 ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRN 369 (502)
Q Consensus 290 ~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~ 369 (502)
++|.++.+++|++.++. .|+++. ++...........+|... ..+..+++++..
T Consensus 194 -~~divv~s~SKalaG~r-~G~v~~-~~~li~~l~~~~~~~~~s------------------------~~~~~~~aa~~a 246 (346)
T TIGR03576 194 -GADLVVTSTDKLMDGPR-GGLLAG-RKELVDKIKSVGEQFGLE------------------------AQAPLLAAVVRA 246 (346)
T ss_pred -CCcEEEeccchhccccc-eEEEEe-CHHHHHHHHHhhcCcccC------------------------ccHHHHHHHHHH
Confidence 47888999999764443 465554 444333222222233221 012223333333
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHH
Q 037144 370 FGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNR 449 (502)
Q Consensus 370 ~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (502)
+.......+.+...++++++.+.++. +.+. ++..+.+.+++.+.. . ..
T Consensus 247 L~~~~~~~~~~~l~~r~~~~~~~l~~---~~~~-~~~~~f~~~~~~~~~--------------------------~--~~ 294 (346)
T TIGR03576 247 LEEFELSRIRDAFKRKEEVYLRLFDK---LNVE-RTPTGFVIKGVEEEK--------------------------L--IE 294 (346)
T ss_pred HhhccHHHHHHHHHHHHHHHHHHHHh---CCCC-cCCCeEEEEeCCCCC--------------------------H--HH
Confidence 32212244556666777777777764 3333 334555444443210 0 11
Q ss_pred HHHHHHHhcCcEEEEeeeEC-CEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 450 ELLESINVSGKVFMTHAIVG-GIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 450 ~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
...+.|.+.|.++.++..+. ..+++|+|++.+.-+..+.++++++|++-
T Consensus 295 ~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~ 344 (346)
T TIGR03576 295 IGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDS 344 (346)
T ss_pred HHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHhc
Confidence 23344555677655544432 25699999984321122799999999764
No 184
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.79 E-value=8.2e-17 Score=164.43 Aligned_cols=326 Identities=13% Similarity=0.095 Sum_probs=191.8
Q ss_pred CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC
Q 037144 103 VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD 182 (502)
Q Consensus 103 ~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~ 182 (502)
.+...|..+++..++|+.+. +++|.+ .+++|+|||+|+..++.+..+ ++++| ++.
T Consensus 44 ~gd~~Y~~~~g~~~Leeaia----~~~g~~---------~vv~t~~Gt~Al~la~~al~~-----------pGD~V-~~~ 98 (431)
T cd00617 44 LGDEAYAGSKSFYDLEDAVQ----DLFGFK---------HIIPTHQGRGAENILFSILLK-----------PGRTV-PSN 98 (431)
T ss_pred hCCCccCCCCCHHHHHHHHH----HHHCCC---------eEEEcCCHHHHHHHHHHHhCC-----------CCCEE-ccC
Confidence 33346888999999998865 455654 379999999999888776543 56666 444
Q ss_pred CCch-hHHHHHHHcCCCCCCEEEEecCCCC--------CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc-cccC--
Q 037144 183 QTHC-AFQKAAQIVGIDRKNIRAIKTTKSS--------SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI-TAVD-- 250 (502)
Q Consensus 183 ~~H~-s~~~aa~~~Glg~~~v~~v~~~~~~--------~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~-G~id-- 250 (502)
.|+ +....+.+.|. .++.+++++.. .|.+|+++|+++|++... .++.+|+++.++|++ |..-
T Consensus 99 -~~f~~~~~~i~~~Ga---~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~--~~~~~I~v~~p~N~~gG~~~s~ 172 (431)
T cd00617 99 -MHFDTTRGHIEANGA---VPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGA--ENIPYIVLTITNNTAGGQPVSM 172 (431)
T ss_pred -CcccchHHHHHhCCC---EeEEEecccccccccccCCCCCcCHHHHHHHhCcccC--CCccEEEEECCcCCCCCccCCH
Confidence 555 55567788999 99999997432 255999999999975411 124478888888887 7774
Q ss_pred -ChhHHHHHHHHhCCEEEeeccccccc-ccC----ccch-----hhh-cCCCCCCeeEEccCCcCCCCCcceEEEeeCch
Q 037144 251 -PLKPLCDVAKQFGIWVHVDAAYAGSA-CIC----PEFR-----HFI-DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPS 318 (502)
Q Consensus 251 -pl~eI~~i~~~~g~~lhVDaA~g~~~-~~~----~~~~-----~~~-~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~ 318 (502)
+|++|.++|++||+|+|.|+|+.... ++. +.+. ... .-.+.+|++++++||.+.+|. .|+++.++++
T Consensus 173 ~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~-GG~i~~~d~~ 251 (431)
T cd00617 173 ANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI-GGFLALRDDE 251 (431)
T ss_pred HHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCcc-ceEEEeCcHH
Confidence 56788999999999999999965421 111 1111 110 112369999999999988875 4566666654
Q ss_pred hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCch-HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144 319 CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSL-KLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK 397 (502)
Q Consensus 319 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al-~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 397 (502)
....... +.... ++...+ ++-..+-+ ++..+++.. .+ .+.+++..+.+++|.+.|++.
T Consensus 252 l~~~~~~----~~~~~-------~~~~~~------gG~~~r~~~A~A~gL~e~-~~--~~~l~~~~~~r~~l~~~L~~~- 310 (431)
T cd00617 252 LYEEARQ----RVVLY-------EGFVTY------GGMAGRDMEALAQGLREA-VE--EDYLRHRVEQVRYLGDRLDEA- 310 (431)
T ss_pred HHHHHHH----hcccc-------CCcccc------ccccHHHHHHHHHHHHhc-cc--HHHHHHHHHHHHHHHHHHHHC-
Confidence 4332211 11000 000000 11111111 111122211 11 244555666779999999988
Q ss_pred CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeE-------C
Q 037144 398 RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIV-------G 469 (502)
Q Consensus 398 ~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~-------~ 469 (502)
|+.+..|.....+.+....- .. +.. .+.. ....+..+|.+ .|...+..+.+ .
T Consensus 311 G~~v~~P~Ggh~v~~d~~~~-~~----------~~~-----~~~~----~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~ 370 (431)
T cd00617 311 GVPIVEPAGGHAVFIDAREF-LP----------HIP-----QEQF----PAQALAAELYLEAGVRAVELGIFSAGRDPNT 370 (431)
T ss_pred CCCccCCCcceEEEEEhHHh-cC----------CCC-----cccC----cHHHHHHHHHHHcCeeEEeecceecccCCCC
Confidence 88887544333333333210 00 000 0000 12344433333 34433332211 1
Q ss_pred ------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 470 ------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 470 ------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.-..+|+++--..-+.+++|++.+.|..+.++
T Consensus 371 ~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 371 GENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred CcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 13689999864445677999999999988653
No 185
>PRK07908 hypothetical protein; Provisional
Probab=99.79 E-value=1.4e-16 Score=160.75 Aligned_cols=306 Identities=13% Similarity=0.078 Sum_probs=193.5
Q ss_pred CCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144 87 SSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK 166 (502)
Q Consensus 87 ~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~ 166 (502)
..+|..+.+.+...++. ...|....+..++. +++++.+|++.+ ..++|+|+++++..++. ..
T Consensus 34 ~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr----~aia~~~~~~~~-------~I~it~Ga~~al~~~~~--l~---- 95 (349)
T PRK07908 34 DTPPEWLRERLAARLGD-LAAYPSTEDERRAR----AAVAARHGRTPD-------EVLLLAGAAEGFALLAR--LR---- 95 (349)
T ss_pred CCCCHHHHHHHHHHhhH-hhcCCCccchHHHH----HHHHHHhCcChh-------hEEECCCHHHHHHHHHh--cC----
Confidence 44555566666665533 22344333444444 555666787654 68999999998865544 11
Q ss_pred HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144 167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246 (502)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~ 246 (502)
++.++ +..+++......++..|+ +++.+|++. ++.+|+++++ +. +.+|+++.++|+|
T Consensus 96 -------~~~vi-v~~P~y~~~~~~~~~~G~---~i~~v~~~~--~~~~d~~~l~----~~------~~~i~l~np~NPT 152 (349)
T PRK07908 96 -------PRRAA-VVHPSFTEPEAALRAAGI---PVHRVVLDP--PFRLDPAAVP----DD------ADLVVIGNPTNPT 152 (349)
T ss_pred -------CCeEE-EeCCCChHHHHHHHHcCC---EEEeeccCc--ccCcChhHhc----cC------CCEEEEcCCCCCC
Confidence 34344 455677777788899999 999999975 3788988553 22 2377788999999
Q ss_pred cccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEE-ccCCcCC-CCCcceEEEeeCchhhhhhh
Q 037144 247 TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSF-NPHKWLF-TTLDCCCLWVKDPSCLLSTL 324 (502)
Q Consensus 247 G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~-~~hK~l~-~p~~~g~~~~r~~~~l~~~~ 324 (502)
|.+-|.++|.++|++ +.++++|++|+... .. .... +.....-+++++ +++|.++ ....+|+++.. +..+....
T Consensus 153 G~~~~~~~l~~l~~~-~~~iIvDe~y~~~~-~~-~~~~-l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~-~~~~~~~~ 227 (349)
T PRK07908 153 SVLHPAEQLLALRRP-GRILVVDEAFADAV-PG-EPES-LAGDDLPGVLVLRSLTKTWSLAGLRVGYALGA-PDVLARLT 227 (349)
T ss_pred CCCcCHHHHHHHHhc-CCEEEEECcchhhc-cC-Cccc-cccccCCCEEEEeecccccCCccceeeeeecC-HHHHHHHH
Confidence 999999999999964 78999999997542 11 1111 111122346665 7999886 55667888864 33332211
Q ss_pred cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHH---hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRN---FGVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~---~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
.....+ . ...+...+.... .+.+.+++..++..++++++.+.|+++ ++++
T Consensus 228 ~~~~~~--------------------~------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~ 280 (349)
T PRK07908 228 RGRAHW--------------------P------VGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARV 280 (349)
T ss_pred hcCCCC--------------------C------ccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEe
Confidence 111100 0 011111111111 123456777888889999999999988 7887
Q ss_pred ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEec
Q 037144 402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAG 479 (502)
Q Consensus 402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~ 479 (502)
..++..+.+++.++. ...+.+.+.++|..+.++..+. +..++|++++
T Consensus 281 ~~p~~g~~~~~~~~~-------------------------------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~ 329 (349)
T PRK07908 281 VDPAAAPFVLVRVPD-------------------------------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR 329 (349)
T ss_pred ccCCCceEEEEECCc-------------------------------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC
Confidence 755566666665432 1355666667787655544443 3579999985
Q ss_pred CCCCcHHHHHHHHHHHHHHHH
Q 037144 480 NSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 480 ~~~t~~~di~~~~~~l~~~~~ 500 (502)
+++++++++++|+++..
T Consensus 330 ----~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 330 ----PRAEVPVLVQALAEILK 346 (349)
T ss_pred ----CCccHHHHHHHHHHHHh
Confidence 45599999999998754
No 186
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=6.3e-17 Score=164.81 Aligned_cols=220 Identities=15% Similarity=0.172 Sum_probs=153.3
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|...++|+. ++++.|.+. ++++++|++|+..++.+... +++.|+++...|.+..
T Consensus 59 ~~p~~~~Le~~----lA~~~g~~~---------~i~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~y~~t~ 114 (388)
T PRK07811 59 GNPTRTALEEQ----LAALEGGAY---------GRAFSSGMAATDCLLRAVLR-----------PGDHIVIPNDAYGGTF 114 (388)
T ss_pred CCccHHHHHHH----HHHHhCCCc---------eEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchHHH
Confidence 44566666655 677777653 45667788888777765533 6778888888887544
Q ss_pred HHH-HH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 KAA-QI---VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ~aa-~~---~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
... .. .|+ +++.++. .|+++|++++++++ .+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 115 ~~~~~~~~~~gi---~~~~~d~-------~d~e~l~~~i~~~t------klV~ie~p~NPtg~~~dl~~I~~la~~~gi~ 178 (388)
T PRK07811 115 RLIDKVFTRWGV---EYTPVDL-------SDLDAVRAAITPRT------KLIWVETPTNPLLSITDIAALAELAHDAGAK 178 (388)
T ss_pred HHHHHhCcCCCe---EEEEeCC-------CCHHHHHHhcCcCC------eEEEEECCCCCcceecCHHHHHHHHHHcCCE
Confidence 432 22 355 6665543 48999999987644 3888899999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
+++|++|+.+....+ .. .++|+++.+++|++++|.+ .|+++++++.... .+. ++...
T Consensus 179 lIvD~a~a~~~~~~p-~~------~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~-~~~----~~~~~--------- 237 (388)
T PRK07811 179 VVVDNTFASPYLQQP-LA------LGADVVVHSTTKYIGGHSDVVGGALVTNDEELDE-AFA----FLQNG--------- 237 (388)
T ss_pred EEEECCCCccccCCc-hh------hCCcEEEecCceeecCCCCcEEEEEEECCHHHHH-HHH----HHHHh---------
Confidence 999999977644322 11 1789999999999998754 4767766654322 111 11100
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
.+....++..|..++. .+.+..++++..+++..+.+.|++.|+++-+
T Consensus 238 ----------~g~~~s~~~a~l~~~~--L~tl~~R~~~~~~na~~la~~L~~~p~v~~V 284 (388)
T PRK07811 238 ----------AGAVPGPFDAYLTLRG--LKTLAVRMDRHSENAEAVAEFLAGHPEVSTV 284 (388)
T ss_pred ----------cCCCCCHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence 0011133455655554 3557788899999999999999999988754
No 187
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=2.9e-17 Score=165.94 Aligned_cols=282 Identities=10% Similarity=0.037 Sum_probs=183.7
Q ss_pred HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHHHHHHcCCCC
Q 037144 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQKAAQIVGIDR 199 (502)
Q Consensus 121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~aa~~~Glg~ 199 (502)
+++.+++.+|++.+ ..++|+|+++++...+.+... ++ +.|++..+.+..+...++..|+
T Consensus 65 Lr~aia~~~~~~~~-------~I~it~Gs~~~i~~~~~~~~~-----------~g~d~vlv~~P~y~~y~~~~~~~g~-- 124 (354)
T PRK04635 65 LINAYSAYAGVAPE-------QILTSRGADEAIELLIRAFCE-----------PGQDSIACFGPTYGMYAISAETFNV-- 124 (354)
T ss_pred HHHHHHHHhCcCHH-------HEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHHHHcCC--
Confidence 34556667788765 689999999988766654432 44 7788888888888888999999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh-CCEEEeeccccccccc
Q 037144 200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF-GIWVHVDAAYAGSACI 278 (502)
Q Consensus 200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~-g~~lhVDaA~g~~~~~ 278 (502)
+++.||++. ++.+|++.+++ + ++ +.+|+++.++|+||.+-|.+++.++++.. ++++++|++|..+...
T Consensus 125 -~v~~v~~~~--~~~~~~~~l~~-~-~~------~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~ 193 (354)
T PRK04635 125 -GVKALPLTA--DYQLPLDYIEQ-L-DG------AKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPE 193 (354)
T ss_pred -EEEEEecCC--CCCCCHHHHHh-c-cC------CCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccC
Confidence 999999974 46899998873 3 22 33788899999999999999999999874 7999999999654311
Q ss_pred CccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC
Q 037144 279 CPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR 357 (502)
Q Consensus 279 ~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~ 357 (502)
...........+. .+..+++|+++ .+..+|+++.. ++.+.........| +
T Consensus 194 -~s~~~~~~~~~~~-iv~~S~SK~~~l~GlRlG~~i~~-~~~~~~l~~~~~~~--------------------~------ 244 (354)
T PRK04635 194 -YSVADLLASYPNL-VVLRTLSKAFALAGARCGFTLAN-EELIEILMRVIAPY--------------------P------ 244 (354)
T ss_pred -cchHHHHhhCCCE-EEEechHHHhhhhHHHHhhhhCC-HHHHHHHHhhcCCC--------------------C------
Confidence 1111111111111 45667999986 45567887764 33332211111111 0
Q ss_pred CCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCccc
Q 037144 358 FRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQ 434 (502)
Q Consensus 358 ~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 434 (502)
.......+++..+ |.+.+.+.+++..+.++++.+.|++++++++. ++..+.+.+++. .
T Consensus 245 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~g~f~~~~~~-~----------------- 305 (354)
T PRK04635 245 VPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVL-EGNGNYVLAKFD-D----------------- 305 (354)
T ss_pred CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCcEEEEECC-C-----------------
Confidence 0111222333333 34456666777888889999999998767765 555555555442 1
Q ss_pred ccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 435 YRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 435 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
..++.+.+.++|..+..........++|++++ +.+++++++++|++.
T Consensus 306 -------------~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~----~~e~~~~l~~al~~~ 352 (354)
T PRK04635 306 -------------VDAVFKALWDAGIVARAYKDPRLANCIRFSFS----NRAETDKLIGLIRNQ 352 (354)
T ss_pred -------------HHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC----CHHHHHHHHHHHHHh
Confidence 12455666667865433322223568999975 567999999999763
No 188
>PRK09105 putative aminotransferase; Provisional
Probab=99.78 E-value=1.5e-16 Score=161.39 Aligned_cols=280 Identities=11% Similarity=0.057 Sum_probs=187.3
Q ss_pred HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK 200 (502)
Q Consensus 121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~ 200 (502)
+++.+++.+|++.+ ..++|+|+++++..++.+..+ +++.|+++++.|..+...++..|+
T Consensus 83 Lr~aia~~~~v~~e-------~I~it~Gs~~ai~~~~~~l~~-----------~gd~Vli~~P~y~~~~~~~~~~g~--- 141 (370)
T PRK09105 83 LRTLFAAQEGLPAD-------HVMAYAGSSEPLNYAVLAFTS-----------PTAGLVTADPTYEAGWRAADAQGA--- 141 (370)
T ss_pred HHHHHHHHhCcChh-------hEEEcCChHHHHHHHHHHHcC-----------CCCEEEEeCCChHHHHHHHHHcCC---
Confidence 44556777888765 689999999988777665533 567888899999999999999999
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH--hCCEEEeeccccccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGSACI 278 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~--~g~~lhVDaA~g~~~~~ 278 (502)
+++.+|.+. ++.+|++.|++.. +. +.+|+++.++|+||.+-+.++|.++++. +++|+++|.+|..+..
T Consensus 142 ~~~~v~~~~--~~~~d~~~l~~~~-~~------~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~- 211 (370)
T PRK09105 142 PVAKVPLRA--DGAHDVKAMLAAD-PN------AGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSD- 211 (370)
T ss_pred eEEEecCCC--CCCCCHHHHHhcC-CC------CCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhcc-
Confidence 999999874 4689999998752 22 2378888999999999998988888764 4899999999954321
Q ss_pred CccchhhhcCCCCCCeeE-EccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC
Q 037144 279 CPEFRHFIDGVECVDSFS-FNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR 356 (502)
Q Consensus 279 ~~~~~~~~~~~~~aDsi~-~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr 356 (502)
.+....... ...+.++ .+++|+++ ....+|+++.. +..+. .+... .+ .
T Consensus 212 ~~s~~~~~~--~~~~vi~~~SfSK~~g~~GlRiG~~v~~-~~~i~-~l~~~-~~---~---------------------- 261 (370)
T PRK09105 212 APSVVDLVA--QRKDLIVLRTFSKLYGMAGMRLGLAAAR-PDLLA-KLARF-GH---N---------------------- 261 (370)
T ss_pred CcchHHHHh--hCCCEEEEecccHhhcCCccceeeeecC-HHHHH-HHHhc-CC---C----------------------
Confidence 111111111 1345555 46889986 44567887753 33322 22111 00 0
Q ss_pred CCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccc
Q 037144 357 RFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQY 435 (502)
Q Consensus 357 ~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 435 (502)
........++...+. .+.+++..++..++++++.+.|++. ++++. +++.+++.+.....
T Consensus 262 ~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~~~f~~~~~~~~------------------ 321 (370)
T PRK09105 262 PLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK-GYKCT-PSQANCFMVDVKRP------------------ 321 (370)
T ss_pred CcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcC-CCCCcEEEEeCCCC------------------
Confidence 012223334444432 3556777788889999999999987 77765 56666665443211
Q ss_pred cccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-CEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 436 RQFSEEERTNEFNRELLESINVSGKVFMTHAIVG-GIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 436 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
..++.+.|.++|..+ .. .+. ...++|++++ +++++++++++|+++.
T Consensus 322 ------------~~~l~~~L~~~gI~v-~~-~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 322 ------------AKAVADAMAKQGVFI-GR-SWPIWPNWVRVTVG----SEEEMAAFRSAFAKVM 368 (370)
T ss_pred ------------HHHHHHHHHHCCcEE-ec-CCCCCCCeEEEEcC----CHHHHHHHHHHHHHHh
Confidence 235677777777643 21 222 2579999986 4568999999998765
No 189
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.78 E-value=4.8e-17 Score=164.52 Aligned_cols=218 Identities=13% Similarity=0.145 Sum_probs=154.8
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|....+|++ ++++.|.+ .+++++||+.|+..++.+... +++.|++++..|.+..
T Consensus 48 gnPt~~~lE~~----lA~l~g~~---------~~~~~~sG~~Ai~~al~all~-----------~GD~Vl~~~~~y~~t~ 103 (377)
T TIGR01324 48 GTLTHFALQDA----MCELEGGA---------GCYLYPSGLAAVTNSILAFVK-----------AGDHVLMVDSAYEPTR 103 (377)
T ss_pred CCccHHHHHHH----HHHHhCCC---------cEEEECcHHHHHHHHHHHhcC-----------CCCEEEEcCCCcHHHH
Confidence 55766777766 56666754 468899999999877765532 6778888888876655
Q ss_pred HH----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 KA----AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ~a----a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
.. ...+|+ ++..++.+ +.++|++++++++ .+|+++.++|++|.+.||++|+++|+++|+|
T Consensus 104 ~~~~~~~~~~gi---~v~~~d~~-------~~e~l~~~i~~~t------klV~lesp~Np~g~~~dl~~I~~la~~~g~~ 167 (377)
T TIGR01324 104 YFCDIVLKRMGV---DITYYDPL-------IGEDIATLIQPNT------KVLFLEAPSSITFEIQDIPAIAKAARNPGIV 167 (377)
T ss_pred HHHHHHHHhcCc---EEEEECCC-------CHHHHHHhcCCCc------eEEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence 43 345677 77776532 2278888886544 3899999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
++||++|+.+...-| .. .++|.++.+.|||++++.+ .|+++. +++....... ..++..
T Consensus 168 livD~t~a~g~~~~p-l~------~gaDivv~S~tK~l~G~~d~~gG~v~~-~~~~~~~l~~--~~~~~G---------- 227 (377)
T TIGR01324 168 IMIDNTWAAGLLFKP-LE------HGVDISIQAGTKYLVGHSDIMIGTVVA-NARTWDQLRE--HSYLMG---------- 227 (377)
T ss_pred EEEECCCccccccCc-cc------cCceEEEecCceeccCCCCceEEEEEe-CHHHHHHHHH--HHHHhC----------
Confidence 999999987765332 11 2899999999999987754 354544 4433221110 111111
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
....+...|..++ |.+-+..+++++.++|..+.+.|++.|.++-
T Consensus 228 ------------~~l~p~~a~~~~r--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~ 271 (377)
T TIGR01324 228 ------------QMVDADDAYTTLR--GLRTLGVRLKQHQESSLAIAKWLSEQPEVAR 271 (377)
T ss_pred ------------CCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHHhCCCcCE
Confidence 1123456676666 4567778899999999999999999988753
No 190
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=5.5e-17 Score=164.30 Aligned_cols=220 Identities=14% Similarity=0.129 Sum_probs=157.3
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|....+|+. ++++.|.+ .+++++||++|+..++.+... +++.|+++...|.+..
T Consensus 51 ~npt~~~Le~~----lA~leg~e---------~ivvt~gg~~Ai~~~l~all~-----------~Gd~Il~~~~~y~~~~ 106 (388)
T PRK08861 51 GNPNRGLLEQT----LSELESGK---------GAVVTNCGTSALNLWVSALLG-----------PDDLIVAPHDCYGGTY 106 (388)
T ss_pred CCchHHHHHHH----HHHHhCCC---------eEEEECCHHHHHHHHHHHHcC-----------CCCEEEEcCCchHHHH
Confidence 45666666655 67777742 579999999999777765532 6778888888887544
Q ss_pred HHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 KAA----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ~aa----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
... ...|+ +++.++ ..|++++++++++++ .+|+++.++|++|.+-|+++|+++|+++|++
T Consensus 107 ~~~~~~~~~~gi---~v~~vd-------~~d~e~l~~~i~~~t------klV~lesP~NPtG~v~dl~~I~~la~~~gi~ 170 (388)
T PRK08861 107 RLFNTRANKGDF---KVQFVD-------QSDAAALDAALAKKP------KLILLETPSNPLVRVVDIAELCQKAKAVGAL 170 (388)
T ss_pred HHHHHHHhcCCe---EEEEEC-------CCCHHHHHHhcCcCC------eEEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence 332 22355 666664 248899999886544 3899999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
++||.+|+.+....| . . -++|.++.+.|||+++|.+ .|+++.+++....... ....++
T Consensus 171 vIvDea~~~~~~~~p-l-~-----~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~-~~~~~~------------ 230 (388)
T PRK08861 171 VAVDNTFLTPVLQKP-L-E-----LGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELA-WWGNCI------------ 230 (388)
T ss_pred EEEECCccccccCCC-c-c-----cCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHH-HHHhcc------------
Confidence 999999987654322 1 1 1799999999999998865 4666565543322111 000111
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
+-...+...|..++ |.+-+.-+++++.++|..+.+.|++.|.++-+
T Consensus 231 -----------G~~~~p~~a~l~~r--gl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V 276 (388)
T PRK08861 231 -----------GATGTPFDSYMTLR--GIRTLGARMRVHEESAQQILAYLQTQSLVGTI 276 (388)
T ss_pred -----------CCCCChHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence 11224556776665 56778889999999999999999999988643
No 191
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=4.6e-17 Score=164.22 Aligned_cols=220 Identities=11% Similarity=0.118 Sum_probs=161.6
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144 109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF 188 (502)
Q Consensus 109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (502)
...|....+|+. ++++-|.. .++++++|+.|+.+++.+... +++.|+++...|.++
T Consensus 59 ~~nPt~~~le~~----la~LEg~~---------~a~~~~SGmaAi~~~~~~ll~-----------~GD~Vv~~~~~Yg~t 114 (395)
T PRK08114 59 RGTLTHFSLQEA----MCELEGGA---------GCALYPCGAAAVANAILAFVE-----------QGDHVLMTGTAYEPT 114 (395)
T ss_pred CCChhHHHHHHH----HHHHhCCC---------eEEEEhHHHHHHHHHHHHHcC-----------CCCEEEEeCCCcHHH
Confidence 467777778876 55665543 467888899988777665432 677888988888776
Q ss_pred HHHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC-
Q 037144 189 QKAA----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG- 263 (502)
Q Consensus 189 ~~aa----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g- 263 (502)
.+.+ +..|+ +++.++. .|++.++++|+++++ +|.+..++|++|.+-||++|+++|+++|
T Consensus 115 ~~l~~~~l~~~Gi---~v~~vd~-------~d~~~l~~~l~~~Tr------lV~~EtpsNp~~~v~DI~~Ia~ia~~~g~ 178 (395)
T PRK08114 115 QDFCSKILSKLGV---TTTWFDP-------LIGADIAKLIQPNTK------VVFLESPGSITMEVHDVPAIVAAVRSVNP 178 (395)
T ss_pred HHHHHHHHHhcCc---EEEEECC-------CCHHHHHHhcCCCce------EEEEECCCCCCCEeecHHHHHHHHHHhCC
Confidence 6544 55688 8888874 367889999976543 8999999999999999999999999985
Q ss_pred -CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC--cceEEEeeCchhhhhhhcCCcccccCccCCCCC
Q 037144 264 -IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL--DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEP 340 (502)
Q Consensus 264 -~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~--~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 340 (502)
+.++||++++.+.. ++.... ++|++..+.|||++++. .+|+++. ++..... +... .+.
T Consensus 179 g~~lvVDnT~a~p~~-~~pl~~------GaDivv~S~tKyl~Ghsdv~~G~v~~-~~~~~~~-l~~~-~~~--------- 239 (395)
T PRK08114 179 DAVIMIDNTWAAGVL-FKALDF------GIDISIQAGTKYLVGHSDAMIGTAVA-NARCWEQ-LREN-SYL--------- 239 (395)
T ss_pred CCEEEEECCCccccc-cCHHHc------CCcEEEEcCcccccCCCcceeEEEEc-CHHHHHH-HHHH-HHh---------
Confidence 99999999988765 433332 89999999999999885 5665544 3332211 1100 000
Q ss_pred cccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
.+.-..+...|..++ |.+-+.-+++++.++|..+.+.|+++|.++-+
T Consensus 240 -------------~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~va~~L~~hp~V~~V 286 (395)
T PRK08114 240 -------------MGQMVDADTAYMTSR--GLRTLGVRLRQHEESSLKVAEWLAEHPEVARV 286 (395)
T ss_pred -------------ccCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEE
Confidence 111235567776665 56778889999999999999999999988743
No 192
>PLN02672 methionine S-methyltransferase
Probab=99.78 E-value=1.4e-16 Score=175.69 Aligned_cols=349 Identities=11% Similarity=0.107 Sum_probs=208.6
Q ss_pred CCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144 87 SSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK 166 (502)
Q Consensus 87 ~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~ 166 (502)
..+|..+.+.+...+..... +++..++.+.+++|+++.+|++.+. ....++++|+++++..++.+..+
T Consensus 709 ~ppPp~V~eAi~eal~~~~~----s~g~pdlr~aLa~~la~~~Gv~~d~----~e~IIvt~Gs~elL~lll~aLl~---- 776 (1082)
T PLN02672 709 LPVPSAVKASIFESFVRQNI----SESETDPRPSILQFIKSNYGFPTDS----CTEFVYGDTSLALFNKLVLCCVQ---- 776 (1082)
T ss_pred CCCCHHHHHHHHHHHhhcCC----CCCChHHHHHHHHHHHHHhCcCCCC----CCEEEEeCCHHHHHHHHHHHHcC----
Confidence 33455566666555433221 1223456789999999999986531 01466666665555444444433
Q ss_pred HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCC-cc
Q 037144 167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGT-TA 245 (502)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gt-t~ 245 (502)
+++.|++..++++.+..+++..|. +++.||+++++++.+|++.|++++++..+ + +|+++.++ |+
T Consensus 777 -------pGD~VLVp~PtY~~Y~~~a~~~Ga---~vv~Vpl~~e~gf~lD~d~Le~al~~~~~----~-~I~L~nPnhNP 841 (1082)
T PLN02672 777 -------EGGTLCFPAGSNGTYVSAAKFLKA---NFRRIPTKSSDGFKLTAKTLASTLETVKK----P-WVYISGPTINP 841 (1082)
T ss_pred -------CCCEEEEeCCChHHHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHhccCCC----C-EEEEECcCCCC
Confidence 678888999999999999999999 99999997555689999999999864211 2 57777776 99
Q ss_pred cccc---CChhHHHHHHHHhCCEEEeecccccccccCcc-----chhhhcCCCC---C-Cee-EEccCCcCC-CCCcceE
Q 037144 246 ITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPE-----FRHFIDGVEC---V-DSF-SFNPHKWLF-TTLDCCC 311 (502)
Q Consensus 246 ~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~-----~~~~~~~~~~---a-Dsi-~~~~hK~l~-~p~~~g~ 311 (502)
||.+ +.+++|+++|++||+++++|.+|+...+..+. ....+..... . .++ ..++.|.++ ....+|+
T Consensus 842 TG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGy 921 (1082)
T PLN02672 842 TGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGF 921 (1082)
T ss_pred cCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHhee
Confidence 9998 56778888999999999999999765543211 1111111111 1 133 347886665 5566888
Q ss_pred EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc------HHHHHHHHHHHHHH
Q 037144 312 LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG------VANLRNFIRSHVGM 385 (502)
Q Consensus 312 ~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g------~~g~~~~~~~~~~l 385 (502)
++..++.... .+.....+.... ....+.+..++..+. .+.+.+..+.+.++
T Consensus 922 lIap~~eLi~-~l~~~~~~s~~~----------------------~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~r 978 (1082)
T PLN02672 922 LALNDSVLID-AFHSAPGLSRPH----------------------STLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSR 978 (1082)
T ss_pred EEeCCHHHHH-HHHHhhhhcCCC----------------------cHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHH
Confidence 8775553332 221111110000 001122222222221 23455666778888
Q ss_pred HHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEe
Q 037144 386 AKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTH 465 (502)
Q Consensus 386 a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 465 (502)
++++.+.|++. ++++. +|+.+++.|...+..... ..+.+. .....+......++.+.|.++..+.+.+
T Consensus 979 Rd~L~e~L~~~-Gi~v~-~PeGGFfLwl~l~~~l~~-------~~~~~~---~~~~~~~~lds~efae~LLee~GVaV~P 1046 (1082)
T PLN02672 979 AERLKETLEAC-GWDVL-EPQGGISMVAKPSAYLGK-------TVKLKS---IDGDTGIKLDSSNIREAILKSTGLCINS 1046 (1082)
T ss_pred HHHHHHHHHHC-CCeEe-cCCcEEEEEEEccccccc-------cccccc---cccccccCCCHHHHHHHHHHcCCEEEec
Confidence 99999999987 78765 667777766532210000 000000 0000000001246777777663444445
Q ss_pred eeE-CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 466 AIV-GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 466 ~~~-~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
+.+ +..+++|++++ +++++++++++.|++..+
T Consensus 1047 Gs~FG~~g~~RIsfa---~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1047 SSWTGIPGYCRFSFA---LEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred CcccCCCCeEEEEec---CCHHHHHHHHHHHHHHHH
Confidence 444 44579999987 467799999999988654
No 193
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=1.4e-16 Score=163.46 Aligned_cols=244 Identities=11% Similarity=0.079 Sum_probs=157.8
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|....+| +.++++.|.+ ..+++++|+.|+..++..... +++.|+++...|.+..
T Consensus 67 ~~pt~~~le----~~la~l~g~~---------~~v~fsSG~~Ai~~al~~ll~-----------~Gd~VI~~~~~y~~t~ 122 (437)
T PRK05613 67 TNPTVEALE----NRIASLEGGV---------HAVAFASGQAAETAAILNLAG-----------AGDHIVTSPRLYGGTE 122 (437)
T ss_pred cChHHHHHH----HHHHHHhCCC---------eEEEeCCHHHHHHHHHHHhcC-----------CCCEEEECCCccHHHH
Confidence 445555555 4577888874 256777777888766654421 6788999988888763
Q ss_pred ----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 ----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
+.+...|+ +++.++ ++ .|+++|+++|+++++ +|++...++++|.+.||++|+++|+++|+.
T Consensus 123 ~~~~~~l~~~Gi---~v~~vd-~~-----~d~e~l~~~l~~~tk------~V~~e~~~Np~~~v~di~~I~~la~~~gi~ 187 (437)
T PRK05613 123 TLFLVTLNRLGI---EVTFVE-NP-----DDPESWQAAVQPNTK------AFFGETFANPQADVLDIPAVAEVAHRNQVP 187 (437)
T ss_pred HHHHHHHHhcCe---EEEEEC-CC-----CCHHHHHHhCCccCe------EEEEECCCCCCCcccCHHHHHHHHHHcCCe
Confidence 44566788 899887 32 288999999976543 677778899999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCch-hhhhh--hcCCcccccCccCCCCCc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPS-CLLST--LSTNPQYLKNEATDQEPK 341 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~-~l~~~--~~~~~~yl~~~~~~~~~~ 341 (502)
+|||++++.+....+ . .. ++|.+++++||+++++. +.|.+++.+.. ..... ....-+++....... ..
T Consensus 188 livD~t~a~g~~~~p-~-~~-----GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 259 (437)
T PRK05613 188 LIVDNTIATAALVRP-L-EL-----GADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAY-HG 259 (437)
T ss_pred EEEECCCccccccCh-H-Hh-----CCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCcccc-cc
Confidence 999999977654322 1 11 79999999999997653 34666663321 10000 000000000000000 00
Q ss_pred ccccCCC----------cccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 342 EQEVGYK----------DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 342 ~~~~~~~----------~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
-...+.. .+....+-...+...|..++ |.+.+..+++++.++|..+.+.|+++|.++-+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V 328 (437)
T PRK05613 260 LKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQ--GLDTLSLRLERHNENAIKVAEFLNNHEKVAKV 328 (437)
T ss_pred ccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 0000000 01111233345567776665 66888999999999999999999999988543
No 194
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=1.1e-16 Score=162.04 Aligned_cols=220 Identities=13% Similarity=0.117 Sum_probs=155.3
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|....+|+.+ +++.|.. .+++++||++|+..++.+..+ +++.|+++...|.+..
T Consensus 59 ~npt~~~Le~~i----A~le~~~---------~~~~~~sG~~Ai~~~l~all~-----------~GD~Vvv~~~~Y~~t~ 114 (394)
T PRK09028 59 GTPTHFAFQAAI----VELEGGA---------GTALYPSGAAAISNALLSFLK-----------AGDHLLMVDSCYEPTR 114 (394)
T ss_pred CCchHHHHHHHH----HHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHH
Confidence 456666777664 4554432 468999999998877765533 6788888888886665
Q ss_pred HH----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 KA----AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ~a----a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
.. ....|+ ++..++.+ +.+.|++++++++ .+|+++.++|++|.+.||++|+++|+++|++
T Consensus 115 ~l~~~~l~~~Gi---~v~~v~~~-------~~e~l~~~l~~~T------klV~lespsNPtg~v~dl~~I~~la~~~g~~ 178 (394)
T PRK09028 115 DLCDKILKGFGI---ETTYYDPM-------IGEGIRELIRPNT------KVLFLESPGSITMEVQDVPTLSRIAHEHDIV 178 (394)
T ss_pred HHHHHhhhhcce---EEEEECCC-------CHHHHHHhcCcCc------eEEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence 43 344677 77776532 4577888886544 3899999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc-eEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC-CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE 344 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~-g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 344 (502)
++||.+|+.+...-| ... +||.+..+.|||++++.+. +.+++.++..... +.....++
T Consensus 179 lvvD~t~a~p~~~~P-l~~------GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~-l~~~~~~~------------- 237 (394)
T PRK09028 179 VMLDNTWASPINSRP-FEM------GVDISIQAATKYIVGHSDVMLGTATANEKHWDQ-LREHSYLM------------- 237 (394)
T ss_pred EEEECCccccccCCc-ccc------CceEEEEeCCeEecCCCCEEEEEEECCHHHHHH-HHHHHHhc-------------
Confidence 999999987653322 221 8999999999999887432 2234455433221 11000011
Q ss_pred cCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 345 VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
+.-..+...|..++ |.+-+.-+++++.++|..+.+.|+++|.++-+
T Consensus 238 ----------G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~la~~L~~~p~v~~V 283 (394)
T PRK09028 238 ----------GQCTSPDDVYLAMR--GLRTLGVRLAQHEKNALKVANWLATRPEVDHV 283 (394)
T ss_pred ----------CCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEE
Confidence 11225567776665 56778899999999999999999999987643
No 195
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.78 E-value=5.3e-17 Score=164.76 Aligned_cols=212 Identities=13% Similarity=0.155 Sum_probs=150.1
Q ss_pred HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH----HHHH
Q 037144 119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK----AAQI 194 (502)
Q Consensus 119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~----aa~~ 194 (502)
.++.+.+++++|.+ ..+++++|+.|+..++. .. + +++.|+++...|.+..+ .+..
T Consensus 50 ~~le~~la~l~g~~---------~~l~~~sG~~al~~~l~-ll----~-------~Gd~Vl~~~~~y~~~~~~~~~~~~~ 108 (378)
T TIGR01329 50 TALESLLAKLDKAD---------RAFAFSSGMAALDVITR-LL----N-------NGDEIIAGDDLYGGTDRLLTQVVPR 108 (378)
T ss_pred HHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHH-Hh----C-------CCCEEEEcCCCchHHHHHHHHHHHH
Confidence 34556688888874 35777777766543332 21 1 67788888888876544 4556
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144 195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 274 (502)
Q Consensus 195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~ 274 (502)
.|+ +++.++++ |++++++++++++ .+|+++.++|++|.+.|+++|+++|+++|++++||++++.
T Consensus 109 ~G~---~v~~vd~~-------d~~~le~~i~~~t------klv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~ 172 (378)
T TIGR01329 109 SGV---VVVHVDTT-------DLDKVKAALGPKT------KLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMS 172 (378)
T ss_pred cCc---EEEEeCCC-------CHHHHHHhcCcCc------eEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcc
Confidence 788 88888752 7899999987543 3899999999999999999999999999999999999966
Q ss_pred ccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc
Q 037144 275 SACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI 352 (502)
Q Consensus 275 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~ 352 (502)
+....+ ... ++|+++.++|||+++|.+ .|+++++++....... .+....
T Consensus 173 ~~~~~~-l~~------g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~----~~~~~~------------------ 223 (378)
T TIGR01329 173 PLLCNP-LEL------GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVY----FLQNST------------------ 223 (378)
T ss_pred cccCCh-hhc------CCcEEEEecceeccCCccceeEEEEeCcHHHHHHHH----HHHHhc------------------
Confidence 543222 111 789999999999998876 7888787654322111 111000
Q ss_pred cCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144 353 TLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFE 400 (502)
Q Consensus 353 ~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~ 400 (502)
+....+...|..++ +.+.+..++++...++..+.+.|++.|.+.
T Consensus 224 --G~~~~~~~a~l~~~--~l~tl~~R~e~~~~na~~la~~L~~~~~v~ 267 (378)
T TIGR01329 224 --GSGLAPFDCWLLLR--GIKTLAIRIEKQQENARAIAMFLSTHPRVK 267 (378)
T ss_pred --CCcCCHHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 00112334454443 557788899999999999999999988764
No 196
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=1.4e-16 Score=162.69 Aligned_cols=213 Identities=15% Similarity=0.145 Sum_probs=150.1
Q ss_pred HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcC
Q 037144 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVG 196 (502)
Q Consensus 121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~G 196 (502)
+.+.++++.|.+ ..+++++|++|+.+++.+... +++.|+++...|.. +...+...|
T Consensus 65 Le~~lA~l~g~~---------~~v~~~sG~~Ai~~~l~all~-----------pGD~Vvv~~p~Y~~t~~~~~~~~~~~g 124 (405)
T PRK08776 65 LGEALAELEGGA---------GGVITATGMGAINLVLNALLQ-----------PGDTLVVPHDAYGGSWRLFNALAKKGH 124 (405)
T ss_pred HHHHHHHHhCCC---------ceEEEcCHHHHHHHHHHHHhC-----------CCCEEEEccCCchHHHHHHHHHHHhcC
Confidence 445577888864 357888888887665554422 67778888778765 333445556
Q ss_pred CCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccc
Q 037144 197 IDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 276 (502)
Q Consensus 197 lg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~ 276 (502)
+ +++.++. .|+++|++++++++ .+|+++.++|++|.+.|+++|+++|+++|++++||++|+.+.
T Consensus 125 ~---~v~~v~~-------~d~~~l~~~i~~~t------klV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~ 188 (405)
T PRK08776 125 F---ALITADL-------TDPRSLADALAQSP------KLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPA 188 (405)
T ss_pred c---EEEEECC-------CCHHHHHHhcCcCC------eEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccc
Confidence 6 6776653 37899998886543 378889999999999999999999999999999999997654
Q ss_pred ccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144 277 CICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL 354 (502)
Q Consensus 277 ~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 354 (502)
...| .. .++|.++.++||++++|.+ .|+++.+++..... +.....+.
T Consensus 189 ~~~p-l~------~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~-l~~~~~~~----------------------- 237 (405)
T PRK08776 189 LQKP-LE------FGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQ-LVWWANAL----------------------- 237 (405)
T ss_pred cCCc-cc------ccCCEEEecCceeecCCCCceEEEEEeCCHHHHHH-HHHHHHhc-----------------------
Confidence 3211 11 2789999999999998754 56666666543222 11100000
Q ss_pred CCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 355 CRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 355 sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
+-...++..|..++ |.+.+..++++..+++..+.+.|++.|.++-+
T Consensus 238 g~~~s~~~a~l~~~--gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V 283 (405)
T PRK08776 238 GLTGSPFDAFLTLR--GLRTLDARLRVHQENADAIAALLDGHAAVNQV 283 (405)
T ss_pred CCCCCHHHHHHHHh--hhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 00124566676664 56788999999999999999999999988643
No 197
>PLN02368 alanine transaminase
Probab=99.78 E-value=2e-16 Score=161.63 Aligned_cols=281 Identities=9% Similarity=-0.013 Sum_probs=189.5
Q ss_pred HHHHHHHHHHhhc--CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144 89 VAGIVGEMLSSGF--NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK 166 (502)
Q Consensus 89 ~~~~~~~~l~~~~--n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~ 166 (502)
++..+.+.+.... +.....|....+..++.+.+.+|+.+.+|++-+. ...++|+|+++++..++.+....
T Consensus 82 p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-----~~I~it~Ga~~al~~~~~~l~~~--- 153 (407)
T PLN02368 82 PADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDP-----ELIFLTDGASKGVMQILNAVIRG--- 153 (407)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEcccHHHHHHHHHHHHcCC---
Confidence 4566666654422 2223457666677889999999999988864221 26899999999987776655411
Q ss_pred HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144 167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246 (502)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~ 246 (502)
+++.|++..+++..+...++..|. +++.+|++.+++|.+|+++|++++++...++.++.+|+++.++|+|
T Consensus 154 -------pGd~Vli~~P~Y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPT 223 (407)
T PLN02368 154 -------EKDGVLVPVPQYPLYSATISLLGG---TLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPT 223 (407)
T ss_pred -------CCCEEEEeCCCCccHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCC
Confidence 678888999999999999999999 9999999865568999999999998643333345678888999999
Q ss_pred ccc---CChhHHHHHHHHhCCEEEeecccccccccCc-cc---hhhhcCC----C-CCCeeE-EccCCcC-C-CCCcceE
Q 037144 247 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP-EF---RHFIDGV----E-CVDSFS-FNPHKWL-F-TTLDCCC 311 (502)
Q Consensus 247 G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~-~~---~~~~~~~----~-~aDsi~-~~~hK~l-~-~p~~~g~ 311 (502)
|.+ +.+++|+++|++||+|+++|.+|+...+... .+ ......+ + ....++ .+++|.+ + ....+|+
T Consensus 224 G~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy 303 (407)
T PLN02368 224 GQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGY 303 (407)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEE
Confidence 999 4577788889999999999999977654221 11 1111111 1 112444 5689997 3 5677888
Q ss_pred EEe--eCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-----H-------HHHHH
Q 037144 312 LWV--KDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-----V-------ANLRN 377 (502)
Q Consensus 312 ~~~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-----~-------~g~~~ 377 (502)
+++ .++..+....... .... ....+..+++...+. . +...+
T Consensus 304 ~i~~~~~~~li~~~~~~~--~~~~-----------------------~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~ 358 (407)
T PLN02368 304 FEMTNIPPKTVEEIYKVA--SIAL-----------------------SPNVSGQIFMGLMVNPPKPGDISYDQFVRESKG 358 (407)
T ss_pred EEEeCCCHHHHHHHHHHh--cccC-----------------------CCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHH
Confidence 875 3443333221111 0000 012344444444442 1 11234
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEE
Q 037144 378 FIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFR 413 (502)
Q Consensus 378 ~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~ 413 (502)
+++.+.++++.+.+.|+++||+.+. +|+.+++.|.
T Consensus 359 ~~~~~~~rr~~~~~~L~~~~g~~~~-~P~Gafy~~~ 393 (407)
T PLN02368 359 ILESLRRRARMMTDGFNSCKNVVCN-FTEGAMYSFP 393 (407)
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEeC-CCCeeeEecc
Confidence 6778888999999999999999875 6777777774
No 198
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=7.9e-17 Score=165.59 Aligned_cols=241 Identities=15% Similarity=0.145 Sum_probs=160.6
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-- 187 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-- 187 (502)
..|....+|+. ++++.|.+ ..++++||+.|+..++..... +++.|+++...|..
T Consensus 62 ~~p~~~~Le~~----lA~leg~~---------~al~~~sG~~Ai~~al~~ll~-----------~GD~Vlv~~~~y~~t~ 117 (431)
T PRK08248 62 MNPTTDVFEKR----IAALEGGI---------GALAVSSGQAAITYSILNIAS-----------AGDEIVSSSSLYGGTY 117 (431)
T ss_pred CCchHHHHHHH----HHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEccCchhhHH
Confidence 45655666655 77887754 368999999998877765532 67788888877753
Q ss_pred --HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 188 --FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 188 --~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
+...++..|+ +++.++. .|+++|+++|++.+ .+|+++.++|++|.+-|+++|+++|+++|++
T Consensus 118 ~~~~~~~~~~Gv---~v~~vd~-------~d~e~l~~ai~~~t------klV~l~sp~NPtG~v~di~~I~~la~~~gi~ 181 (431)
T PRK08248 118 NLFAHTLPKLGI---TVKFVDP-------SDPENFEAAITDKT------KALFAETIGNPKGDVLDIEAVAAIAHEHGIP 181 (431)
T ss_pred HHHHHHHHhCCE---EEEEECC-------CCHHHHHHhcCCCC------eEEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence 3345677888 8888875 27899999886543 3788889999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhh-hh------hhcCCcccccCccCC
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCL-LS------TLSTNPQYLKNEATD 337 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l-~~------~~~~~~~yl~~~~~~ 337 (502)
++||++++......| .. .++|.++.+.|||+++|. ..|.+++.+.... .. ..+..+.|.......
T Consensus 182 vIvD~t~a~~~~~~p-l~------~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (431)
T PRK08248 182 LIVDNTFASPYLLRP-IE------HGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTD 254 (431)
T ss_pred EEEeCCCCccccCCh-hH------cCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhh
Confidence 999999975443322 11 189999999999999875 3666666433211 00 000011110000000
Q ss_pred CCCcccccC-----CCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 338 QEPKEQEVG-----YKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 338 ~~~~~~~~~-----~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
..+... ...+....+....+...|..++ |.+-+..+++++.++|..+.+.|+++|+++-+
T Consensus 255 ---~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V 319 (431)
T PRK08248 255 ---AVGEAAYITKARVQLLRDLGAALSPFNSFLLLQ--GLETLHLRMERHSENALAVAKFLEEHEAVEWV 319 (431)
T ss_pred ---hhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCcceE
Confidence 000000 0000111233345566676655 66778899999999999999999999998743
No 199
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.77 E-value=1.1e-16 Score=163.25 Aligned_cols=221 Identities=14% Similarity=0.119 Sum_probs=158.4
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|...++|+ .++++.|.+ .+++++||++|+..++.+... +++.|+++...|.+..
T Consensus 63 ~~pt~~~Le~----~lA~l~g~~---------~~l~~~sgt~Ai~~~l~al~~-----------~GD~Vl~~~~~y~~~~ 118 (394)
T PRK07050 63 ATPTSLALAQ----RLAEIEGGR---------HALLQPSGLAAISLVYFGLVK-----------AGDDVLIPDNAYGPNR 118 (394)
T ss_pred CCHHHHHHHH----HHHHHhCCC---------eEEEeccHHHHHHHHHHHHhC-----------CCCEEEEecCCcccHH
Confidence 4455555554 577887753 478999999999888776633 6788999988887644
Q ss_pred ----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 ----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
..+..+|+ +++.++.. +.++|++++++++ .+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 119 ~~~~~~~~~~Gi---~v~~vd~~-------~~~~l~~~i~~~t------klV~le~p~Np~~~~~di~~I~~ia~~~gi~ 182 (394)
T PRK07050 119 DHGEWLARDFGI---TVRFYDPL-------IGAGIADLIQPNT------RLIWLEAPGSVTMEVPDVPAITAAARARGVV 182 (394)
T ss_pred HHHHHHHHhcCe---EEEEECCC-------CHHHHHHhcCCCC------eEEEEECCCCCCccHhhHHHHHHHHHHcCCE
Confidence 35667788 88887642 4467888876544 4888999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
+++|++|+.+...-+ .. .++|.++.+.+|++++..+ .|++++++++...... ....++..
T Consensus 183 livD~a~a~~~~~~~-l~------~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~-~~~~~~G~---------- 244 (394)
T PRK07050 183 TAIDNTYSAGLAFKP-FE------HGVDISVQALTKYQSGGSDVLMGATITADAELHAKLK-LARMRLGI---------- 244 (394)
T ss_pred EEEECCcccccccCH-HH------cCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHH-HHHHhcCC----------
Confidence 999999977654322 11 1689999999999976654 5666666654432221 11111110
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF 403 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~ 403 (502)
...+...|.+++ |.+.+..++++..+++.++.+.|++.|+++-+.
T Consensus 245 -------------~~~~~~a~l~lr--~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~ 289 (394)
T PRK07050 245 -------------GVSADDCSLVLR--GLPSLQVRLAAHDRSALEVAEWLKARPEIATVL 289 (394)
T ss_pred -------------CCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 113455676665 456677799999999999999999998877543
No 200
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=1.5e-16 Score=163.36 Aligned_cols=244 Identities=12% Similarity=0.097 Sum_probs=157.5
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|....+|+ .++++.|.+. ++++++|+.|+..++.+... +++.|+++...|.+..
T Consensus 67 ~~p~~~~Le~----~lA~l~g~~~---------av~~sSG~aAi~~al~all~-----------~Gd~Vv~~~~~y~~t~ 122 (436)
T PRK07812 67 MNPTQDVVEQ----RIAALEGGVA---------ALLLASGQAAETFAILNLAG-----------AGDHIVSSPRLYGGTY 122 (436)
T ss_pred CCchHHHHHH----HHHHHhCCCe---------EEEEccHHHHHHHHHHHHhC-----------CCCEEEEeCCcchHHH
Confidence 3455555655 4778888653 68888999998777765432 5777888877776654
Q ss_pred HH----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 KA----AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ~a----a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
.. +...|+ +++.++ +. .|+++++++|++++ .+|++..++|++|.+.|+++|+++|+++|++
T Consensus 123 ~~~~~~l~~~Gi---~v~~vd-d~-----~d~e~l~~ai~~~t------klV~ie~~sNp~G~v~Dl~~I~~la~~~gi~ 187 (436)
T PRK07812 123 NLFHYTLPKLGI---EVSFVE-DP-----DDLDAWRAAVRPNT------KAFFAETISNPQIDVLDIPGVAEVAHEAGVP 187 (436)
T ss_pred HHHHHHhhcCeE---EEEEEC-CC-----CCHHHHHHhCCCCC------eEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 33 334666 777775 22 28999999887544 3888999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCch-hhhh-----hhcCCcccccCccCCC
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPS-CLLS-----TLSTNPQYLKNEATDQ 338 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~-~l~~-----~~~~~~~yl~~~~~~~ 338 (502)
++||++++.+....+ .. .++|.++.++||+++++.+ .|.+++.+.. .... ..+.+++|........
T Consensus 188 liVD~t~a~~~~~~p-l~------~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (436)
T PRK07812 188 LIVDNTIATPYLIRP-LE------HGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAEL 260 (436)
T ss_pred EEEECCCcccccCCc-hh------cCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhc
Confidence 999999977554322 11 2899999999999986632 4555553321 1000 0011111211000000
Q ss_pred CCccccc-CCC-cccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 339 EPKEQEV-GYK-DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 339 ~~~~~~~-~~~-~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
. ..... ... .+....+-...+...|..++ |.+.+..++++..++|..+.+.|+++|+++-+
T Consensus 261 ~-~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V 323 (436)
T PRK07812 261 G-PPAYALKARVQLLRDLGSAISPFNAFLIAQ--GLETLSLRIERHVANAQRVAEFLEARDEVASV 323 (436)
T ss_pred c-hhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0 00000 000 00111233345566665554 66888999999999999999999999988644
No 201
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.77 E-value=1.1e-16 Score=163.23 Aligned_cols=217 Identities=15% Similarity=0.181 Sum_probs=152.2
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-- 187 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-- 187 (502)
..|...++|+ .++++.|.+. .+++++|+.++..++. ... +++.|+++...|.+
T Consensus 52 ~~p~~~~le~----~lA~l~g~~~---------~v~~~sG~~ai~~~l~-~l~-----------~Gd~Vlv~~~~y~~~~ 106 (390)
T PRK08064 52 GNPTREALED----IIAELEGGTK---------GFAFASGMAAISTAFL-LLS-----------KGDHVLISEDVYGGTY 106 (390)
T ss_pred CChhHHHHHH----HHHHHhCCCC---------eEEECCHHHHHHHHHH-HhC-----------CCCEEEEccCccchHH
Confidence 4455555554 4778888763 3566777777654443 221 56778888887763
Q ss_pred --HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 188 --FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 188 --~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
+.+.++..|+ +++.++.+ |+++++++++++++ +|+++.++|++|.+.|+++|.++|+++|++
T Consensus 107 ~~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~l~~~tk------lV~l~~p~NptG~~~dl~~I~~la~~~g~~ 170 (390)
T PRK08064 107 RMITEVLSRFGI---EHTFVDMT-------NLEEVAQNIKPNTK------LFYVETPSNPLLKVTDIRGVVKLAKAIGCL 170 (390)
T ss_pred HHHHHHHHHcCC---EEEEECCC-------CHHHHHHhcCCCce------EEEEECCCCCCcEeccHHHHHHHHHHcCCE
Confidence 3355667898 99998863 68889988865543 889999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
++||++|+.+....+. .. ++|.++.++||++++|.+ .|+++++++........ +...
T Consensus 171 vvvD~a~~~~~~~~~~--~~-----g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~----~~~~---------- 229 (390)
T PRK08064 171 TFVDNTFLTPLLQKPL--DL-----GADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYF----LQNS---------- 229 (390)
T ss_pred EEEECCCCcccccCch--hh-----CCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHH----HHHh----------
Confidence 9999999776443221 11 789999999999988876 57777776544322110 0000
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFE 400 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~ 400 (502)
.+....+...|..+ .|.+-+..++++..+++..+.+.|++.|.+.
T Consensus 230 ----------~g~~~~~~~a~l~~--~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~ 274 (390)
T PRK08064 230 ----------FGAVLGVQDCWLVL--RGLKTLHVRLEHSSETANKIALYLQEHPKVQ 274 (390)
T ss_pred ----------cCCCCCHHHHHHHH--cccCcHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 01111334556544 3556677899999999999999999988664
No 202
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.77 E-value=2.3e-16 Score=157.92 Aligned_cols=369 Identities=12% Similarity=0.096 Sum_probs=185.2
Q ss_pred chhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHh---hcCCC-CcccccChh
Q 037144 38 PGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSS---GFNVV-GLDWISSPA 113 (502)
Q Consensus 38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~---~~n~~-~~~~~~~p~ 113 (502)
|++++..-+..+|+. .|..++++++.++...+.. ...|+|--...--.|+++.+.+.+ ++..+ .+.-+.+-+
T Consensus 32 P~~i~~~~~~~lp~~-~sE~e~~r~~~~la~kN~~---~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQpEisQG 107 (429)
T PF02347_consen 32 PEEIRLKKPLNLPEP-LSEYELLRHLERLASKNKS---YTSFIGAGSYTHYVPAVIDRNILSRPEFYTAYTPYQPEISQG 107 (429)
T ss_dssp -GGG-SS-----------HHHHHHHHHHHHTTS-----TTS---CTTT-----HHHHH-HHCCHHCCCS-STTSGGGBHH
T ss_pred CHhhcCCCCCCCCCC-CCHHHHHHHHHHHHhcCCC---CCccccccccCceeChhhcCccccChhhhccCCCCCcHHHHH
Confidence 666655445667763 8999999999998776654 445666444445567777662322 22221 112233445
Q ss_pred hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH-
Q 037144 114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA- 192 (502)
Q Consensus 114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa- 192 (502)
.-+.--+...+++++.|++.. +..+..++|.+- .|+..+.... ++ .+.+|+++...|+.....+
T Consensus 108 ~Lq~lfe~Qs~i~eLTGmdva-------NaSlyd~atA~a-Ea~~ma~r~~-~~------~~~~vlv~~~~hP~~~~v~~ 172 (429)
T PF02347_consen 108 RLQALFEYQSMICELTGMDVA-------NASLYDGATAAA-EAMLMAVRAT-KR------KRNKVLVPESLHPQTRAVLR 172 (429)
T ss_dssp HHHHHHHHHHHHHHHHTSSEE--------SEBSSCCHHHH-HHHHHHHHHH-TT---------EEEEETTS-CHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCcc-------CCCCCChhHHHH-HHHHHHHHhc-cc------CCcEEEEcCCcChhhHHHHH
Confidence 555555666999999999853 234445555332 2333332211 10 2357889999998776644
Q ss_pred ---HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEee
Q 037144 193 ---QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVD 269 (502)
Q Consensus 193 ---~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVD 269 (502)
...|+ +++.+|.+++ +..| .++ ...|+++.|+ ..|.++++++|++++|++|..+++
T Consensus 173 t~a~~~g~---~iv~~~~~~~--~~~d--------~~~------~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~gal~~~- 231 (429)
T PF02347_consen 173 TYAAPLGI---EIVEVPLDED--GTTD--------DDD------TAAVMVQNPN-TFGVFEDIKEIADIAHAAGALVIV- 231 (429)
T ss_dssp HHCCHCCE---EEEEE-BBTT--CSB---------STT------EEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-
T ss_pred HhhhhCCe---EEEEeccccc--CCcc--------ccC------eEEEEeecCC-CCceEeeHHHHHHHHHHcCCEEEE-
Confidence 34677 8999998753 3556 222 4578888876 689998899999999999999887
Q ss_pred cccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-----cceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144 270 AAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-----DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE 344 (502)
Q Consensus 270 aA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-----~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 344 (502)
+|-.-........... +||.+ ++-||.|+.|. ++|++.+|+. +. ...|..+.....+ ..+.
T Consensus 232 ~ad~~aL~~l~~Pge~-----GADI~-vg~~Q~fg~p~~~GGP~~G~~a~~~~--l~---r~lPGRiVG~t~D---~~G~ 297 (429)
T PF02347_consen 232 GADPNALGGLKSPGEY-----GADIV-VGEHQTFGIPMGFGGPGAGFFAVRED--LV---RQLPGRIVGQTKD---ADGK 297 (429)
T ss_dssp CGGCCGCCTC--GGGG-----T-SEE-EECCTTTT---CCC-S--EEEEE-GG--GG---GGS-S-EEEEEEB---CCCS
T ss_pred ecCHHHHhCcCChhhc-----CccEE-eeCCCCCcccCCCCCCCeeeEEEhhh--hh---hhCCCceeccccc---cccc
Confidence 6653333333222333 89999 66699988774 4677888765 22 2234444322211 1121
Q ss_pred cCCCcccccC----CCCCC------------chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCee
Q 037144 345 VGYKDWQITL----CRRFR------------SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFS 408 (502)
Q Consensus 345 ~~~~~~~~~~----sr~~~------------al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~ 408 (502)
..+. .+++. -||-. ++..+..+..+|.+|++++.++...+|+|+.++|.+..++.+. .+.+.
T Consensus 298 ~~~~-ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~-~~~f~ 375 (429)
T PF02347_consen 298 RAFV-LTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFD-NPFFF 375 (429)
T ss_dssp CCEE-EE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSS-SSSBS
T ss_pred ceee-eccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccC-CCCce
Confidence 1111 11111 12211 1344556667899999999999999999999999987333332 33332
Q ss_pred EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144 409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV 488 (502)
Q Consensus 409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di 488 (502)
-+.+...+. .. ..+|.++....| +...... ...+-+|++.. ++++||
T Consensus 376 e~v~~~~~~---------------------------~~-~~~l~~~~~~~g---l~~~~~~-~~~~li~~TE~-~t~edi 422 (429)
T PF02347_consen 376 EFVVVFSKD---------------------------KE-VEELLKRGIEGG---LNLRYPD-DGALLICVTET-RTKEDI 422 (429)
T ss_dssp SEEEEESS----------------------------HH-HHHHHHTT-------EEEGGG--SSEEEEE--TT---HHHH
T ss_pred eeeeecCCc---------------------------HH-HHHHHHHHHhcC---CCccccC-CCeEEEEccCC-CCHHHH
Confidence 222222211 11 123566555555 2222112 22788998754 566799
Q ss_pred HHHHHHH
Q 037144 489 RAAWTVV 495 (502)
Q Consensus 489 ~~~~~~l 495 (502)
|++++++
T Consensus 423 d~lv~~f 429 (429)
T PF02347_consen 423 DRLVEAF 429 (429)
T ss_dssp HHHHH--
T ss_pred HHHHhcC
Confidence 9999864
No 203
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.77 E-value=8.5e-16 Score=156.41 Aligned_cols=319 Identities=11% Similarity=0.049 Sum_probs=197.6
Q ss_pred HHHHHHHHHhhcCCC--CcccccChhhHHHHHHHHHHHHHhcC----CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHH
Q 037144 90 AGIVGEMLSSGFNVV--GLDWISSPAAVELENIVMDWLGQMLD----LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDR 163 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~--~~~~~~~p~~~~le~~~~~~l~~l~g----~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~ 163 (502)
|..+.+.+...++.+ ...|. .++..++.+.+++|+.+.+| ++.+ ..++|+|+++++..++.+....
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~~-------~I~it~Ga~~al~~~~~~~~~~ 114 (374)
T PRK02610 43 PPDLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITPA-------NISVGNGSDELIRSLLIATCLG 114 (374)
T ss_pred CHHHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCHH-------HEEEcCChHHHHHHHHHHHcCC
Confidence 344555555544432 23453 35678888888888887753 3332 5889999999886555543321
Q ss_pred HHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCC
Q 037144 164 VLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGT 243 (502)
Q Consensus 164 ~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gt 243 (502)
++..|++..+++..+..+++.+|+ +++.+|++. +++.+|+++|++++++.. ..++.+|+++.++
T Consensus 115 ----------g~~~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~~~-~~~~~d~~~l~~~~~~~~--~~~~k~i~l~~P~ 178 (374)
T PRK02610 115 ----------GEGSILVAEPTFSMYGILAQTLGI---PVVRVGRDP-ETFEIDLAAAQSAIEQTQ--NPPVRVVFVVHPN 178 (374)
T ss_pred ----------CCCeEEEcCCChHHHHHHHHHcCC---EEEEecCCc-ccCCCCHHHHHHHHHhhc--CCCceEEEEeCCC
Confidence 223688888899999999999999 999999864 357999999999986421 1124478888899
Q ss_pred ccccccCChhHHHHHHHH-hCCEEEeecccccccccCccchhhhcCCCCCC-eeEEccCCcCC-CCCcceEEEeeCchhh
Q 037144 244 TAITAVDPLKPLCDVAKQ-FGIWVHVDAAYAGSACICPEFRHFIDGVECVD-SFSFNPHKWLF-TTLDCCCLWVKDPSCL 320 (502)
Q Consensus 244 t~~G~idpl~eI~~i~~~-~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aD-si~~~~hK~l~-~p~~~g~~~~r~~~~l 320 (502)
|+||.+-+.+++.++.+- +++|+++|.+|..+... +... .+.. .-. .+..++.|.++ ....+|+++. ++...
T Consensus 179 NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~-~~~~-~~~~--~~~~ivi~SfSK~~g~~GlRiG~~v~-~~~l~ 253 (374)
T PRK02610 179 SPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQT-TLVG-ELAQ--HPNWVILRTFSKAFRLAAHRVGYAIG-HPELI 253 (374)
T ss_pred CCCCCCCCHHHHHHHHhccCCcEEEEeccccccCcc-chHH-HHhc--CCCEEEEEecchhccCcccceeeeec-CHHHH
Confidence 999999777666665431 48999999999765321 1111 1111 112 45567999995 5566787765 44433
Q ss_pred hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 037144 321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRF 399 (502)
Q Consensus 321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~ 399 (502)
. .+.... ... + ...+...++...++ .+.+.+.+++..+.++.+.+.|++++++
T Consensus 254 ~-~l~~~~-~~~------------------~------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 307 (374)
T PRK02610 254 A-VLEKVR-LPY------------------N------LPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQL 307 (374)
T ss_pred H-HHHHhc-CCC------------------C------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 2 221111 000 0 01222233333332 2344445555555677788888888888
Q ss_pred EEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEec
Q 037144 400 EVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAG 479 (502)
Q Consensus 400 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 479 (502)
.+. ++..+.+.++++.. . ...++.+.+.+.|..+. + ...++|++++
T Consensus 308 ~~~-p~~g~f~~~~l~~~-~---------------------------~~~~~~~~l~~~gi~v~-~----~~~~lRls~~ 353 (374)
T PRK02610 308 RVW-PSAANFLYLRLSQD-A---------------------------ALAALHQALKAQGTLVR-H----TGGGLRITIG 353 (374)
T ss_pred EeC-CCcceEEEEeCCCC-C---------------------------CHHHHHHHHHHCCEEEE-e----CCCeEEEeCC
Confidence 754 55555555544321 0 02356666767786543 2 2358999986
Q ss_pred CCCCcHHHHHHHHHHHHHHHHh
Q 037144 480 NSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 480 ~~~t~~~di~~~~~~l~~~~~~ 501 (502)
. .++++++++.|+++.+.
T Consensus 354 ~----~~~~~~~l~~l~~~l~~ 371 (374)
T PRK02610 354 T----PEENQRTLERLQAALTQ 371 (374)
T ss_pred C----HHHHHHHHHHHHHHHhh
Confidence 2 35789999999887764
No 204
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.77 E-value=1.3e-16 Score=161.56 Aligned_cols=232 Identities=16% Similarity=0.191 Sum_probs=160.2
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-- 187 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-- 187 (502)
..|...++|+ .++++.|.+. .++++||+.|+..++ .... +++.|+++...+.+
T Consensus 50 ~~pt~~~le~----~la~l~g~~~---------~~~~~sG~~ai~~~~-~ll~-----------~Gd~Vl~~~~~y~~t~ 104 (366)
T PRK08247 50 GNPTRGVLEQ----AIADLEGGDQ---------GFACSSGMAAIQLVM-SLFR-----------SGDELIVSSDLYGGTY 104 (366)
T ss_pred CCchHHHHHH----HHHHHhCCCc---------EEEEcCHHHHHHHHH-HHhC-----------CCCEEEEecCCcCcHH
Confidence 3445555554 4788888754 478888888775443 2221 56677777777764
Q ss_pred --HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 188 --FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 188 --~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
+...+...|+ +++.++. .|+++|++++++++ .+|+++.++|++|.+.++++|+++|+++|++
T Consensus 105 ~~~~~~~~~~G~---~v~~vd~-------~d~~~l~~~i~~~t------klv~le~P~NP~~~~~dl~~I~~la~~~g~~ 168 (366)
T PRK08247 105 RLFEEHWKKWNV---RFVYVNT-------ASLKAIEQAITPNT------KAIFIETPTNPLMQETDIAAIAKIAKKHGLL 168 (366)
T ss_pred HHHHHHhhccCc---eEEEECC-------CCHHHHHHhcccCc------eEEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence 3345566888 8888764 38899999987644 3888899999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
+++|.+|+......| .. .++|.++.+++|+++++.+ .|++..++..... .+.....+..
T Consensus 169 lIvD~t~~~~~~~~p-~~------~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~-~~~~~~~~~g----------- 229 (366)
T PRK08247 169 LIVDNTFYTPVLQRP-LE------EGADIVIHSATKYLGGHNDVLAGLVVAKGQELCE-RLAYYQNAAG----------- 229 (366)
T ss_pred EEEECCCccccccCc-hh------cCCcEEEeecceeccCCCceeeeEEecChHHHHH-HHHHHHHhcC-----------
Confidence 999999966544332 11 2789999999999987644 4555544343322 1111000110
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCCeeEEEEEee
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF-PRNFSLVCFRVT 415 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~-~~~~~~v~f~~~ 415 (502)
.....+..|.+++ +.+.+..++++..++++.+.+.|+++|++..+. |+..++++|.+.
T Consensus 230 ------------~~~s~~~a~l~~~--~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 230 ------------AVLSPFDSWLLIR--GMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred ------------CCCChHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEEC
Confidence 0113345566665 345667788889999999999999999988544 447889999764
No 205
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.77 E-value=1.7e-16 Score=161.26 Aligned_cols=219 Identities=14% Similarity=0.117 Sum_probs=154.6
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144 109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF 188 (502)
Q Consensus 109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (502)
...|...++|+. +++++|.+ ..++++||+.|+..++.+... +++.|+++...|.+.
T Consensus 50 ~~np~~~~lE~~----lA~l~g~~---------~~l~~~sG~~Ai~~~l~~ll~-----------~GD~Vlv~~~~y~~~ 105 (385)
T PRK08574 50 EENPTLRPLEEA----LAKLEGGV---------DALAFNSGMAAISTLFFSLLK-----------AGDRVVLPMEAYGTT 105 (385)
T ss_pred CCCccHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhH
Confidence 355666666665 67777764 357888999998877765532 678888999999887
Q ss_pred HHHHHH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHH-HHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCC
Q 037144 189 QKAAQI---VGIDRKNIRAIKTTKSSSYGLSAESVLSQINL-DVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI 264 (502)
Q Consensus 189 ~~aa~~---~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~-~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~ 264 (502)
...++. .|+ +++.++ +|+++|++++++ .+ .+|++..++|++|.+-|+++|+++|+++|+
T Consensus 106 ~~~~~~~~~~g~---~v~~~~--------~d~~~l~~~i~~~~t------klV~ie~p~NPtG~v~dl~~I~~la~~~gi 168 (385)
T PRK08574 106 LRLLKSLEKFGV---KVVLAY--------PSTEDIIEAIKEGRT------KLVFIETMTNPTLKVIDVPEVAKAAKELGA 168 (385)
T ss_pred HHHHHHhhccCc---EEEEEC--------CCHHHHHHhcCccCc------eEEEEECCCCCCCEecCHHHHHHHHHHcCC
Confidence 666543 455 565542 367889988865 33 378889999999999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144 265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE 342 (502)
Q Consensus 265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 342 (502)
++++|++|+.+...-+ .. .++|.++.++||++++|.. .|++++.++......... ..++
T Consensus 169 ~livD~t~a~~~~~~~-l~------~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~-~~~~----------- 229 (385)
T PRK08574 169 ILVVDNTFATPLLYRP-LR------HGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEW-RRRL----------- 229 (385)
T ss_pred EEEEECCCCccccCCh-hh------hCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHH-HHhc-----------
Confidence 9999999976643222 11 2789999999999988765 355666555432221100 0011
Q ss_pred cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
+....++..|.+++ |.+-+..++++..+++.++.+.|++.|.++-
T Consensus 230 ------------g~~~~p~~a~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~~ 274 (385)
T PRK08574 230 ------------GTIMQPFEAYLVLR--GLKTLEVRFERQCRNAMAIAEFLSEHPKVAE 274 (385)
T ss_pred ------------CCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcCE
Confidence 11113344555555 4566888999999999999999999998763
No 206
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.76 E-value=2.4e-16 Score=160.71 Aligned_cols=221 Identities=15% Similarity=0.146 Sum_probs=155.0
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144 109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF 188 (502)
Q Consensus 109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (502)
...|...++|+. ++++.|.+ ..+++++|+.|+..++.+... +++.|+++...|.+.
T Consensus 61 ~~~p~~~~le~~----lA~l~g~~---------~~i~~ssG~~Ai~~~l~all~-----------~GD~Vi~~~~~y~~~ 116 (398)
T PRK08249 61 NTNPTVQAFEEK----VRILEGAE---------AATAFSTGMAAISNTLYTFLK-----------PGDRVVSIKDTYGGT 116 (398)
T ss_pred CCChHHHHHHHH----HHHHhCCC---------eEEEeCChHHHHHHHHHHhcC-----------CCCEEEEcCCchHHH
Confidence 455655666654 67788864 357788888888776655432 677888998898764
Q ss_pred H----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCC
Q 037144 189 Q----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI 264 (502)
Q Consensus 189 ~----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~ 264 (502)
. ..+...|+ +++.++ ..|+++++++|++++ .+|+++.++|++|.+-|+++|+++|+++|+
T Consensus 117 ~~~~~~~~~~~Gi---~v~~vd-------~~d~e~l~~~i~~~t------klV~ie~p~NPtg~v~dl~~I~~la~~~gi 180 (398)
T PRK08249 117 NKIFTEFLPRMGV---DVTLCE-------TGDHEQIEAEIAKGC------DLLYLETPTNPTLKIVDIERLAAAAKKVGA 180 (398)
T ss_pred HHHHHHHHhhCCe---EEEEcC-------CCCHHHHHHhcCCCC------eEEEEECCCCCCCccCCHHHHHHHHHHcCC
Confidence 3 34556777 776654 258999999987644 378888999999999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
+++||++|+.+....+ .. .++|.++.+++|+++++.. .|.+++.++.......... ..
T Consensus 181 ~livD~t~a~~~~~~~-l~------~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~-~~------------- 239 (398)
T PRK08249 181 LVVVDNTFATPINQNP-LA------LGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYR-EI------------- 239 (398)
T ss_pred EEEEECCcCccccCCc-hh------hCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHH-Hh-------------
Confidence 9999999986543221 11 2789999999999987643 3444555554332211100 00
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
.+-.......|.+++ +.+.+..++++..++++.+.+.|++.|.++-+
T Consensus 240 ----------~g~~~s~~~a~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V 286 (398)
T PRK08249 240 ----------NGATMDPMSAYLILR--GMKTLKLRVRQQQESAMALAKYLQTHPKVEAV 286 (398)
T ss_pred ----------cCCCCCHHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 011124456666665 45777889999999999999999999988744
No 207
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.76 E-value=2.1e-16 Score=160.58 Aligned_cols=223 Identities=12% Similarity=0.115 Sum_probs=154.3
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|....+| ++++++.|.+ ..++++||++++..++.+... +++.|+++...|.+..
T Consensus 50 ~~pt~~~L~----~~lA~l~g~~---------~~i~~~sg~~Ai~~~l~~l~~-----------~GD~Vl~~~~~y~~~~ 105 (386)
T PRK08045 50 GNPTRDVVQ----RALAELEGGA---------GAVLTNTGMSAIHLVTTVFLK-----------PGDLLVAPHDCYGGSY 105 (386)
T ss_pred CCccHHHHH----HHHHHHhCCC---------eEEEECCHHHHHHHHHHHHcC-----------CCCEEEEcCCCcHHHH
Confidence 344445555 5577777743 478899999888776665432 6778888888887544
Q ss_pred HH-HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144 190 KA-AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 190 ~a-a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV 268 (502)
.. ..+.+.+.-++..++ ..|++++++++++++ .+|+++.++|++|.+-|+++|.++|+++|++++|
T Consensus 106 ~~~~~~~~~~gi~v~~vd-------~~d~e~l~~~l~~~t------klV~l~sP~NPtG~v~di~~I~~ia~~~g~~viv 172 (386)
T PRK08045 106 RLFDSLAKRGCYRVLFVD-------QGDEQALRAALAEKP------KLVLVESPSNPLLRVVDIAKICHLAREAGAVSVV 172 (386)
T ss_pred HHHHHHHhhCCeEEEEeC-------CCCHHHHHHhcccCC------eEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence 32 223322111455543 358899999886543 3788899999999999999999999999999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144 269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG 346 (502)
Q Consensus 269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (502)
|++|+.+....| .. .++|.++.++|||++++.+ .|+++.+++..... +.....++..
T Consensus 173 Deay~~~~~~~p-l~------~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~-l~~~~~~~g~------------- 231 (386)
T PRK08045 173 DNTFLSPALQNP-LA------LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTE-LAWWANNIGV------------- 231 (386)
T ss_pred ECCCCccccCCc-hh------hCCCEEEeecceeccCCCCceeEEEEeCcHHHHHH-HHHHHHhcCC-------------
Confidence 999977644322 11 1789999999999987765 56666655543221 1111111110
Q ss_pred CCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 347 YKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 347 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
...++..|++++.+ +-+..++++..+++..+.+.|++.|.++-+
T Consensus 232 ----------~~~p~~~~l~~rgl--~tl~~R~~~~~~na~~la~~L~~~p~v~~V 275 (386)
T PRK08045 232 ----------TGGAFDSYLLLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKKL 275 (386)
T ss_pred ----------CCCHHHHHHHHhhh--ccHHHHHHHHHHHHHHHHHHHHcCCCEeEE
Confidence 12456677777654 568899999999999999999999988644
No 208
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.76 E-value=3.3e-16 Score=160.22 Aligned_cols=220 Identities=16% Similarity=0.199 Sum_probs=155.5
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH-
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF- 188 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~- 188 (502)
..|...++|+. +++++|.+ ..++++||+.|+..++.+... +++.|+++...|.+.
T Consensus 62 ~~p~~~~Le~~----iA~~~g~~---------~~l~~~sG~~Ai~~al~~ll~-----------~Gd~Vl~~~~~y~~~~ 117 (400)
T PRK06234 62 GNPTSTEVENK----LALLEGGE---------AAVVAASGMGAISSSLWSALK-----------AGDHVVASDTLYGCTF 117 (400)
T ss_pred CCccHHHHHHH----HHHHhCCC---------cEEEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCccchHH
Confidence 56777777776 55666653 368899999998776654432 677888888777543
Q ss_pred ---HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh--C
Q 037144 189 ---QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF--G 263 (502)
Q Consensus 189 ---~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~--g 263 (502)
...++..|+ +++.++.+ |++++++++++.++ +|+++.++|++|.+.|+++|+++|+++ |
T Consensus 118 ~~~~~~~~~~G~---~v~~vd~~-------d~e~l~~~i~~~tk------lI~iesP~NPtG~v~dl~~I~~la~~~~~~ 181 (400)
T PRK06234 118 ALLNHGLTRYGV---EVTFVDTS-------NLEEVRNALKANTK------VVYLETPANPTLKVTDIKAISNIAHENNKE 181 (400)
T ss_pred HHHHHHHhhCCe---EEEEECCC-------CHHHHHHHhccCCe------EEEEECCCCCCCCcCCHHHHHHHHHhcCCC
Confidence 345577888 88888752 78999999976543 888899999999999999999999997 9
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcC-CcccccCccCCCCC
Q 037144 264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLST-NPQYLKNEATDQEP 340 (502)
Q Consensus 264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~ 340 (502)
+++++|++|+.+....+ . . .++|.++.+++|+++++.. .|+++.+ ++... .+.. ...+..
T Consensus 182 i~livDea~~~~~~~~~-l-~-----~g~Divv~S~sK~l~g~g~~~gG~v~~~-~~~~~-~l~~~~~~~~~-------- 244 (400)
T PRK06234 182 CLVFVDNTFCTPYIQRP-L-Q-----LGADVVVHSATKYLNGHGDVIAGFVVGK-EEFIN-QVKLFGIKDMT-------- 244 (400)
T ss_pred CEEEEECCCCchhcCCc-h-h-----hCCcEEEeeccccccCCCCceeEEEEec-HHHHH-HHHHHHHHHhc--------
Confidence 99999999977644322 1 1 1789999999999987653 4666554 33322 2211 001110
Q ss_pred cccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
+-...+...|..++ |.+.+..++++..+++.++.+.|++.|.+.-+
T Consensus 245 --------------g~~l~p~~a~l~~~--~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V 290 (400)
T PRK06234 245 --------------GSVIGPFEAFLIIR--GMKTLQIRMEKHCKNAMKVAKFLESHPAVEKV 290 (400)
T ss_pred --------------CCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 11224455566655 44667788899999999999999998887543
No 209
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.76 E-value=5.3e-17 Score=162.81 Aligned_cols=319 Identities=13% Similarity=0.067 Sum_probs=203.2
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh-
Q 037144 109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA- 187 (502)
Q Consensus 109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s- 187 (502)
.-+|.+.++-+++.+.|.++++.|++. .-.++++|||.++-.++...... +++.+++.. .++
T Consensus 32 HRs~~F~~i~~e~~~~L~~l~~~~~~~-----~v~~l~GsGT~a~Eaa~~nl~~~----------~g~~vLv~g--~FG~ 94 (374)
T TIGR01365 32 HRSKLGKEKLAEAIKKTREMLGVPADY-----LIGIVPASDTGAVEMALWSMLGC----------RGVDVLAWE--SFGK 94 (374)
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCCCCc-----EEEEECCchHHHHHHHHHHcCCC----------CCCeEEEEC--HHHH
Confidence 457899999999999999999986542 13566999998876665544321 344444442 433
Q ss_pred -HH-HHHHHcCCCCCC-EEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCC
Q 037144 188 -FQ-KAAQIVGIDRKN-IRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI 264 (502)
Q Consensus 188 -~~-~aa~~~Glg~~~-v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~ 264 (502)
|. +.|+.+|+ + +..+..+++. .+|+++++. . + -|++++..|+||...|+++|+..+ ++.
T Consensus 95 r~~~eia~~~g~---~~v~~l~~~~g~--~~~~~~ve~----~--~-----~v~~vhnETSTGv~npv~~i~~~~--~~~ 156 (374)
T TIGR01365 95 GWVTDVTKQLKL---PDVRVLEAEYGK--LPDLKKVDF----K--N-----DVVFTWNGTTSGVRVPNGDFIPAD--REG 156 (374)
T ss_pred HHHHHHHHhcCC---CCcEEEcCCCCC--CCCHHHcCC----C--C-----CEEEecCCCchheecccccccccc--CCC
Confidence 45 78888999 5 7777777644 789999973 1 1 267999999999999998766432 589
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCc-----ccccCccCCCC
Q 037144 265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNP-----QYLKNEATDQE 339 (502)
Q Consensus 265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~-----~yl~~~~~~~~ 339 (502)
.++||+.-+.+..+++- +++|.+..+.+|+++.|.|.+++.++++.+.+ .-.... .|+.....
T Consensus 157 lliVDavSs~g~~~l~~--------d~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~-~~~~~~y~~~~~~~~~~~~--- 224 (374)
T TIGR01365 157 LTICDATSAAFAQDLDY--------HKLDVVTFSWQKVLGGEGAHGMLILSPRAVAR-LESYTPAWPLPKIFRLTKG--- 224 (374)
T ss_pred cEEEEccchhcCCCCCh--------hHCcEEEEechhccCCCCceEEEEECHHHHHH-HhhcCCCCCChhhhccccc---
Confidence 99999987666655532 15999999999999999999999998876532 111111 12211000
Q ss_pred CcccccCCCcccccCCCCCC--chHHHHH---HHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-C--Cee-E
Q 037144 340 PKEQEVGYKDWQITLCRRFR--SLKLWVV---IRNFGVA-NLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-R--NFS-L 409 (502)
Q Consensus 340 ~~~~~~~~~~~~~~~sr~~~--al~~~~~---l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~--~~~-~ 409 (502)
+.+ .........++. ...+++. ++.+..+ |++++.+++.++++.+++.+++++.++++.. + .++ +
T Consensus 225 ---~~~--~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tv 299 (374)
T TIGR01365 225 ---GKL--NKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTS 299 (374)
T ss_pred ---cch--hhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCe
Confidence 000 000000111211 1233333 3333454 8999999999999999999999844787753 1 344 4
Q ss_pred EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE-CCEEEEEEEecCCCCcHHHH
Q 037144 410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV-GGIYVLRFAAGNSMTMESHV 488 (502)
Q Consensus 410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lR~~~~~~~t~~~di 488 (502)
+++.+++.+.++ .+.+....+..++++.+.++|..+ .++.. .....+||..+.. .+.+||
T Consensus 300 t~v~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~~gi~i-~~G~~~~~~~~fRIg~~G~-i~~~di 360 (374)
T TIGR01365 300 VCLKVVDPAIDA-----------------LDEDAQADFAKELISTLEKEGVAY-DIGSYRDAPSGLRIWCGAT-VEKSDL 360 (374)
T ss_pred EEEEeCCccccc-----------------cccchhhHHHHHHHHHHHHCCEEE-eccccccCCCceEEecCCc-CCHHHH
Confidence 456653321100 000011223456788888888643 33322 1236899998865 556699
Q ss_pred HHHHHHHHHH
Q 037144 489 RAAWTVVQEH 498 (502)
Q Consensus 489 ~~~~~~l~~~ 498 (502)
+.+++.|.=+
T Consensus 361 ~~l~~~l~~~ 370 (374)
T TIGR01365 361 ECLCPWLDWA 370 (374)
T ss_pred HHHHHHHHHH
Confidence 9999998644
No 210
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=6.7e-16 Score=156.48 Aligned_cols=291 Identities=9% Similarity=0.018 Sum_probs=187.0
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHHHHHHcCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQKAAQIVGID 198 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~aa~~~Glg 198 (502)
++++.+++++|++.+ ..++|+|+++++..++.+... ++ ++|+++.+.+..+...++..|+
T Consensus 63 ~lr~~ia~~~~~~~~-------~I~~t~G~~~~l~~~~~~~~~-----------~g~~~vlv~~p~y~~~~~~~~~~g~- 123 (364)
T PRK04781 63 GLRSALAALYGCAPE-------QLLIGRGSDEAIDLLVRALCV-----------PGRDAVLVTPPVFGMYAVCARLQNA- 123 (364)
T ss_pred HHHHHHHHHhCcChH-------HEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHHHHcCC-
Confidence 445556667787654 688999999888666554432 34 6788888777777778899999
Q ss_pred CCCEEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH--hCCEEEeecccccc
Q 037144 199 RKNIRAIKTTK-SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGS 275 (502)
Q Consensus 199 ~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~--~g~~lhVDaA~g~~ 275 (502)
+++.+|++. ++++.+|++++++.+... .+.+|+++.++|+||.+-|.+++.++++. +++|+++|.+|+.+
T Consensus 124 --~~~~v~~~~~~~~~~~d~~~l~~~~~~~-----~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f 196 (364)
T PRK04781 124 --PLVEVPLVDGADGFHADVPAIVAAALAS-----NAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEF 196 (364)
T ss_pred --EEEEEecCCCccCCCcCHHHHHHHHhcc-----CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhh
Confidence 999999853 234678999886654321 13477778899999999999888888875 47999999999765
Q ss_pred cccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144 276 ACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL 354 (502)
Q Consensus 276 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 354 (502)
.. .+..........+ =.+.-++.|.++ .....|+++. +++... .+....... +
T Consensus 197 ~~-~~~~~~~~~~~~~-vi~~~SfSK~~gl~GlRvGy~v~-~~~l~~-~l~~~~~~~-------------------~--- 250 (364)
T PRK04781 197 SD-VPSAVGLLARYDN-LAVLRTLSKAHALAAARIGSLIA-NAELIA-VLRRCQAPY-------------------P--- 250 (364)
T ss_pred cC-CcchHHHHhhCCC-EEEEecChhhcccccceeeeeeC-CHHHHH-HHHhccCCC-------------------C---
Confidence 42 1111111111111 145567999997 5566787765 444332 222111100 0
Q ss_pred CCCCCchHHHHHHHHh--c-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCC
Q 037144 355 CRRFRSLKLWVVIRNF--G-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGT 431 (502)
Q Consensus 355 sr~~~al~~~~~l~~~--g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~ 431 (502)
...+...++...+ + .+...+.+++..+.++++.+.|++++++..+.++..+.+.+++. .
T Consensus 251 ---~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~-~-------------- 312 (364)
T PRK04781 251 ---VPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD-D-------------- 312 (364)
T ss_pred ---CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC-C--------------
Confidence 0122223333333 2 24456666777888899999999988875444666656555542 1
Q ss_pred cccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 432 YDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG-GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
..++.+.+.++|..+..+..+. ...++|++++ +.++.++++++|+++..
T Consensus 313 ----------------~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 313 ----------------AEAAFQALLAAGVVVRDQRAAPRLSDALRITLG----TPEQNDRVLAALQRTQA 362 (364)
T ss_pred ----------------HHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHHHh
Confidence 2356677777887665554332 2468999986 45689999999988643
No 211
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.76 E-value=1.2e-16 Score=146.97 Aligned_cols=297 Identities=11% Similarity=0.068 Sum_probs=203.7
Q ss_pred hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144 114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ 193 (502)
Q Consensus 114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~ 193 (502)
...+.+.+...++++.|-++ .++.+++-.||.-++.+... +++.|+..+..|.|+....+
T Consensus 110 tq~iHk~LE~kiAqfh~rED---------~ilypscfdANag~feail~-----------pedAvfSDeLNhASIIdGir 169 (417)
T KOG1359|consen 110 TQDIHKLLESKIAQFHGRED---------TILYPSCFDANAGAFEAILT-----------PEDAVFSDELNHASIIDGIR 169 (417)
T ss_pred chHHHHHHHHHHHHHhCCCc---------eEEeccccccchHHHHHhcC-----------hhhhhhccccccchhhhhhH
Confidence 46677788888999988664 57788888888555444432 67788888899999998877
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccc
Q 037144 194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 273 (502)
Q Consensus 194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g 273 (502)
++.- .+.+|+-+||..+.+..+.. -.+|+.....++.|.+.|+++|..+++|||+.+.+|.+|+
T Consensus 170 Lckr--------------y~h~dv~~l~~~l~~a~k~r--~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHa 233 (417)
T KOG1359|consen 170 LCKR--------------YRHVDVFDLEHCLISACKMR--LKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHA 233 (417)
T ss_pred HHhh--------------hccchhHHHHHHHHHhhhhe--EEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeeccc
Confidence 6652 23678888998877554322 2356666678899999999999999999999999999998
Q ss_pred cccccCc--cchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhh-cCCcccccCccCCCCCcccccCCCcc
Q 037144 274 GSACICP--EFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTL-STNPQYLKNEATDQEPKEQEVGYKDW 350 (502)
Q Consensus 274 ~~~~~~~--~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~ 350 (502)
.+++--. .....+.-+.++|.+.....|.+++. .|.+...++.+ .+.+ +...+|++.....
T Consensus 234 Tgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga--~GGyttgp~~l-i~llrqr~RpylFSnslp------------- 297 (417)
T KOG1359|consen 234 TGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGA--SGGYTTGPKPL-ISLLRQRSRPYLFSNSLP------------- 297 (417)
T ss_pred ceeecCCCCChHHHhCCCCcceehhhhhhhhhcCC--CCCCccCChhH-HHHHHhcCCceeecCCCC-------------
Confidence 8765321 11222333458999999999998743 33343333333 3333 4566788764321
Q ss_pred cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCC
Q 037144 351 QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNG 430 (502)
Q Consensus 351 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 430 (502)
-+--..+.+++..+. .-.+.+.+...+.++|++.++.. ||++.+.. .+++...+..
T Consensus 298 ---pavV~~a~ka~dllm-----~s~~~i~~~~a~~qrfr~~me~a-GftIsg~~-hPI~pv~lGd-------------- 353 (417)
T KOG1359|consen 298 ---PAVVGMAAKAYDLLM-----VSSKEIQSRQANTQRFREFMEAA-GFTISGAS-HPICPVMLGD-------------- 353 (417)
T ss_pred ---hhhhhhhHHHHHHHH-----hhHHHHHHHHHHHHHHHHHHHhc-CceecCCC-CCccceeccc--------------
Confidence 000012233333332 22567778888999999999876 99997643 3444443322
Q ss_pred CcccccccchhHhhHHHHHHHHHHHHhcCcEEEE---eeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMT---HAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.++..++.++|.++|+.++. |.+..|+.-+|+.+...||++ |||++++++.++.+.
T Consensus 354 --------------a~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~e-did~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 354 --------------ARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEE-DIDRLIEAFSEVGRF 412 (417)
T ss_pred --------------HHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHH-HHHHHHHHHHHHHHh
Confidence 34466778888899986543 444578889999997776665 999999999998764
No 212
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.76 E-value=3e-16 Score=159.63 Aligned_cols=219 Identities=12% Similarity=0.204 Sum_probs=152.9
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh---
Q 037144 111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--- 187 (502)
Q Consensus 111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--- 187 (502)
.|...++| +.+++++|.+ ..++++||++|+..++.+... +++.|+++...|.+
T Consensus 53 ~p~~~~le----~~la~l~g~~---------~~~~~~sG~~Ai~~al~al~~-----------~Gd~Vl~~~~~~~~t~~ 108 (380)
T TIGR01325 53 NPTVAAFE----ERIAALEGAE---------RAVATATGMSAIQAALMTLLQ-----------AGDHVVASRSLFGSTVG 108 (380)
T ss_pred CchHHHHH----HHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEecCCcchHHH
Confidence 44455555 4577888874 358899999999877765432 56677777777643
Q ss_pred -HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144 188 -FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV 266 (502)
Q Consensus 188 -~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l 266 (502)
+.+.+..+|+ +++.++.+ |++++++++++++ .+|++..++|++|.+.|+++|.++|+++|+++
T Consensus 109 ~~~~~~~~~g~---~v~~v~~~-------d~~~l~~~i~~~t------klV~le~p~np~g~~~dl~~I~~la~~~gi~l 172 (380)
T TIGR01325 109 FISEILPRFGI---EVSFVDPT-------DLNAWEAAVKPNT------KLVFVETPSNPLGELVDIAALAELAHAIGALL 172 (380)
T ss_pred HHHHHHHHhCC---EEEEECCC-------CHHHHHHhcCCCc------eEEEEECCCCCCCeeeCHHHHHHHHHHcCCEE
Confidence 3446677888 88888753 7888988886533 48888999999999999999999999999999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144 267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV 345 (502)
Q Consensus 267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (502)
+||++|+.+....+ .. .++|.++.++||+++++. ..|.+++.++..... +. .+...
T Consensus 173 ivD~a~~~~~~~~p-l~------~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~-l~---~~~~~------------ 229 (380)
T TIGR01325 173 VVDNVFATPVLQQP-LK------LGADVVVYSATKHIDGQGRVMGGVIAGSEELMAE-VA---VYLRH------------ 229 (380)
T ss_pred EEECCCcccccCCc-hh------hCCCEEEeeccceecCCCCeEEEEEEeCHHHHHH-HH---HHHHh------------
Confidence 99999976543222 11 168999999999998764 333444444433221 11 11110
Q ss_pred CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
.+....+..+|.+++ |.+.+..++++..+++.++.+.|+++|+++-+
T Consensus 230 --------~g~~~~p~~a~~~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V 276 (380)
T TIGR01325 230 --------TGPAMSPFNAWVLLK--GLETLSLRMQKQFDSALAIAEWLQAQPQVQAV 276 (380)
T ss_pred --------hCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCccEE
Confidence 011123344566554 55777888999999999999999999987643
No 213
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.76 E-value=3.6e-16 Score=158.35 Aligned_cols=279 Identities=11% Similarity=0.093 Sum_probs=184.6
Q ss_pred HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK 200 (502)
Q Consensus 121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~ 200 (502)
+++.+++.+|++.+ ..++|+|+++++..++.+..+ +++.|+++.+++..+...++..|+
T Consensus 69 Lr~aia~~~~~~~~-------~I~vt~Gs~e~i~~~~~~l~~-----------~gd~vlv~~P~y~~~~~~~~~~g~--- 127 (366)
T PRK01533 69 LRQTIANKLHVKME-------QVLCGSGLDEVIQIISRAVLK-----------AGDNIVTAGATFPQYRHHAIIEGC--- 127 (366)
T ss_pred HHHHHHHHhCCCcc-------eEEECCCHHHHHHHHHHHhcC-----------CCCEEEEcCCcHHHHHHHHHHcCC---
Confidence 44445566688664 689999999988766665433 677888999999999999999999
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHH---HhCCEEEeecccccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAK---QFGIWVHVDAAYAGSAC 277 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~---~~g~~lhVDaA~g~~~~ 277 (502)
+++.||++ ++.+|+++|++++++.+ .+|+++.++|+||.+-+.+++.++++ +++ ++++|.+|..+..
T Consensus 128 ~v~~v~~~---~~~~d~~~l~~~~~~~~------~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~ 197 (366)
T PRK01533 128 EVKEVALN---NGVYDLDEISSVVDNDT------KIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVT 197 (366)
T ss_pred EEEEeecC---CCCcCHHHHHHHhCcCC------cEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhc
Confidence 99999986 34799999999886543 36778899999999988766666554 455 6788999964432
Q ss_pred cCccchhhhcCCCCC--CeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144 278 ICPEFRHFIDGVECV--DSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL 354 (502)
Q Consensus 278 ~~~~~~~~~~~~~~a--Dsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 354 (502)
. ......+..+... -.+..++.|.++ ....+|+++. ++............|
T Consensus 198 ~-~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~-~~~~~~~l~~~~~~~------------------------ 251 (366)
T PRK01533 198 A-KDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVG-HEELIEKLNVVRLPF------------------------ 251 (366)
T ss_pred c-ccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhC-CHHHHHHHHHhcCCC------------------------
Confidence 1 1111111111121 245667999997 4455677654 343322211111000
Q ss_pred CCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcc
Q 037144 355 CRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYD 433 (502)
Q Consensus 355 sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 433 (502)
....+...++...+. .+...+..+...+.++++.+.++++ ++++. ++..+.+.+++. .
T Consensus 252 --~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~-~~~~nf~~~~~~-~---------------- 310 (366)
T PRK01533 252 --NVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN-EIPFY-QSQTNFIFLPVE-N---------------- 310 (366)
T ss_pred --CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccC-CCcCcEEEEeCC-C----------------
Confidence 013344455555543 3455666677777888888888877 77765 567777776652 2
Q ss_pred cccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 434 QYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 434 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
..++.+.|.++|..+.. + ..++|++++ +.++.++++++|+++.+
T Consensus 311 --------------~~~~~~~l~~~GI~Vr~---~--~~~iRis~~----~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 311 --------------GGEIYEACAHAGFIIRP---F--PNGVRITVG----TREQNEGVISVLQQHFE 354 (366)
T ss_pred --------------HHHHHHHHHHCCcEEcc---C--CCceEEeCC----CHHHHHHHHHHHHHHHH
Confidence 23567777788976543 2 357999986 55799999999998764
No 214
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.76 E-value=5.6e-16 Score=158.33 Aligned_cols=220 Identities=9% Similarity=0.101 Sum_probs=157.9
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch---
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC--- 186 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~--- 186 (502)
..|...++|+. ++++.|.+ ..+++++|+.|+..++.+... +++.|+++...|.
T Consensus 68 ~~p~~~~le~~----lA~l~g~~---------~al~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~~~~t~ 123 (403)
T PRK07810 68 GNPTVSMFEER----LRLIEGAE---------ACFATASGMSAVFTALGALLG-----------AGDRLVAARSLFGSCF 123 (403)
T ss_pred CCchHHHHHHH----HHHHhCCC---------cEEEECChHHHHHHHHHHHhC-----------CCCEEEEccCCcchHH
Confidence 55666666655 67888865 368899999998776655432 6778888876652
Q ss_pred -hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 187 -AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 187 -s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
.+.+.++..|+ +++.++. .|+++++++|+++++ +|++..++|++|.+-|+++|+++|+++|++
T Consensus 124 ~~~~~~~~~~G~---~v~~vd~-------~d~~~l~~ai~~~tk------lV~~esp~Nptg~v~dl~~I~~la~~~g~~ 187 (403)
T PRK07810 124 VVCNEILPRWGV---ETVFVDG-------EDLSQWEEALSVPTQ------AVFFETPSNPMQSLVDIAAVSELAHAAGAK 187 (403)
T ss_pred HHHHHHHHHcCc---EEEEECC-------CCHHHHHHhcCcCce------EEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 33455677898 8888864 288999999976543 788999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
++||++|+.+...-+ . . .++|.++.++||+++++.. .|+++.++ ..+...+. .++..
T Consensus 188 vivD~a~a~~~~~~~-~-~-----~gaDivv~S~tK~l~g~g~~~gG~v~~~~-~~~~~~l~---~~~~~---------- 246 (403)
T PRK07810 188 VVLDNVFATPLLQRG-L-P-----LGADVVVYSGTKHIDGQGRVLGGAILGDR-EYIDGPVQ---KLMRH---------- 246 (403)
T ss_pred EEEECCCCccccCCh-h-h-----cCCcEEEccCCceecCCcCceeEEEEeCh-HHHHHHHH---HHHHH----------
Confidence 999999976654322 1 1 1789999999999986543 45555543 32221110 11111
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
.+....++..|..++ |.+.+..++++..+++.++.+.|++.|.++-+
T Consensus 247 ----------~g~~~s~~~a~l~l~--~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V 293 (403)
T PRK07810 247 ----------TGPALSAFNAWVLLK--GLETLALRVRHSNASALRIAEFLEGHPAVRWV 293 (403)
T ss_pred ----------hCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEE
Confidence 011234566676665 55778999999999999999999999988644
No 215
>PLN02452 phosphoserine transaminase
Probab=99.76 E-value=2.3e-16 Score=158.20 Aligned_cols=340 Identities=11% Similarity=0.043 Sum_probs=213.4
Q ss_pred cccccCCCCCCH-HHHHHHHHHhhcCCCCc------ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCch
Q 037144 78 NYFAYFPATSSV-AGIVGEMLSSGFNVVGL------DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTC 150 (502)
Q Consensus 78 ~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~------~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt 150 (502)
+-+.|.+++... +.++..+....+|-.+. ...-++.+.++-+++.+.|+++++.|+++ .-.++++|||
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y-----~v~~l~Gsgt 81 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNY-----EVLFLQGGAS 81 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEeCccH
Confidence 445677766554 45555555555543211 12346788899999999999999997653 1346668888
Q ss_pred HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCC-CcccCHHHHHHHHHHH
Q 037144 151 EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSS-SYGLSAESVLSQINLD 227 (502)
Q Consensus 151 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~-~~~~d~~~Le~~i~~~ 227 (502)
.++-.++...... .+.+.++. .+.++ +.+.|+.+|. ..+.....+.+ ....++++++. +
T Consensus 82 ~~~ea~~~nl~~~----------~~~~l~~~-~G~fg~r~~~~a~~~g~---~~~~~~~~~~~~~~~~~~~~~~~----~ 143 (365)
T PLN02452 82 TQFAAIPLNLCKP----------GDKADFVV-TGSWSKKAAKEAKKYCK---TNVIASGKDEKYTKIPSVSEWEL----T 143 (365)
T ss_pred HHHHHHHHhcCCC----------CCeEEEEE-CCHHHHHHHHHHHHhCC---CcEEEecCCCCCCCCCChHHcCC----C
Confidence 7765544433221 23344443 46654 6667777776 44444222211 11456666421 1
Q ss_pred HhcCCccEEEEEecCCccccc-cCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC
Q 037144 228 VEAELIPLFLCATVGTTAITA-VDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT 306 (502)
Q Consensus 228 ~~~g~~p~~Vv~t~gtt~~G~-idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p 306 (502)
..+.+|..++..|.+|. +.|++++.+ +.++||++...+..+++-- ..+.+..++||+++ |
T Consensus 144 ----~~~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g~~pidv~--------~~~v~~~saqK~lG-P 204 (365)
T PLN02452 144 ----PDAKFVHICANETIHGVEFKDYPDVGN------VPLVADMSSNFLSKPVDVS--------KYGVIYAGAQKNVG-P 204 (365)
T ss_pred ----CCCcEEEECCCCCCCcEecCcccccCC------CeEEEECCccccCcccCHH--------HcCEEEEecccccC-C
Confidence 12458999999999999 699988863 7999999998887776532 23334479999986 8
Q ss_pred CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHH
Q 037144 307 LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVA-NLRNFIRSHVG 384 (502)
Q Consensus 307 ~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~ 384 (502)
.|.|++++|++.+- ..-...+.|+...... . ..+.-.+-+ +....+..+++.+-.+ |++.+.+++.+
T Consensus 205 ~Gl~~v~vr~~~l~-~~~~~~~~~~~~~~~~--------~--~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~ 273 (365)
T PLN02452 205 SGVTIVIIRKDLIG-NARPITPGMLDYKIHA--------E--NDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIR 273 (365)
T ss_pred CCeEEEEEcHHHHh-hcccCCCchhhHHHHH--------h--cCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 89999999876542 2212223332211000 0 000001111 1224556677777665 89999999999
Q ss_pred HHHHHHHHHhcCCCeEEe-cCC---CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCc
Q 037144 385 MAKLFERLVTSDKRFEVA-FPR---NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGK 460 (502)
Q Consensus 385 la~~l~~~l~~~~~~~l~-~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 460 (502)
+++++++.|++.+||... ..+ ...+|+|.+... ++..++.+.+.++|.
T Consensus 274 ~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~----------------------------~~~~~f~~~~~~~g~ 325 (365)
T PLN02452 274 KADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGS----------------------------ELEAEFVKEAAKAGM 325 (365)
T ss_pred HHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCc----------------------------hhHHHHHHHHHHCCC
Confidence 999999999998887221 111 234788887542 135688888889998
Q ss_pred EEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 461 VFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 461 ~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+.+.+...-| -+|+|+-|. .+.++|++|++.+++..++
T Consensus 326 ~~~~G~r~~g--g~R~s~yna-~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 326 VQLKGHRSVG--GMRASIYNA-MPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred cccCCccccC--ceEEECcCC-CCHHHHHHHHHHHHHHHHh
Confidence 7655543323 299998665 5567999999999987654
No 216
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=8.3e-16 Score=156.13 Aligned_cols=289 Identities=10% Similarity=0.034 Sum_probs=186.8
Q ss_pred HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK 200 (502)
Q Consensus 121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~ 200 (502)
+++.+++.+|++.+ ..++|+|+++++..++.+..+ +++.|++..++|+.+...++..|.
T Consensus 72 Lr~~ia~~~~~~~~-------~I~it~G~~~~l~~~~~~~~~-----------~gd~vlv~~p~y~~~~~~~~~~g~--- 130 (369)
T PRK08153 72 LRHALAAHHGVAPE-------NIMVGEGIDGLLGLIVRLYVE-----------PGDPVVTSLGAYPTFNYHVAGFGG--- 130 (369)
T ss_pred HHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEECCCcchHHHHHHHHcCC---
Confidence 34445555677654 588899988877655554332 678889999999999888889999
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh--CCEEEeeccccccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSACI 278 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~--g~~lhVDaA~g~~~~~ 278 (502)
+++.+|.+.+ .+|++++++.+.... +.+|+++.++|+||.+-+.+++.++++.+ ++|+++|.+|+.....
T Consensus 131 ~~~~vp~~~~---~~~~~~l~~~~~~~~-----~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~ 202 (369)
T PRK08153 131 RLVTVPYRDD---REDLDALLDAARREN-----APLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPA 202 (369)
T ss_pred eEEEeeCCCC---CCCHHHHHHHhcccC-----CcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCc
Confidence 9999998642 589988877664321 23677788999999999988888887654 8999999999754321
Q ss_pred CccchhhhcCCCCCCeeEEccCCcCCC-CCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC
Q 037144 279 CPEFRHFIDGVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR 357 (502)
Q Consensus 279 ~~~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~ 357 (502)
..... +.....--.+..++.|.++. ...+|+++.. +.... .+.....+. +
T Consensus 203 -~~~~~-~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~-~~~~~-~l~~~~~~~-------------------~------ 253 (369)
T PRK08153 203 -GAAPP-IDTDDPNVIRMRTFSKAYGLAGARVGYAIGA-PGTIK-AFDKVRNHF-------------------G------ 253 (369)
T ss_pred -ccchh-hhhcCCCEEEEecchHhccCcchheeeeecC-HHHHH-HHHHhhcCC-------------------C------
Confidence 11111 11111112456679999974 4556777763 33322 221111100 0
Q ss_pred CCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCccccc
Q 037144 358 FRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYR 436 (502)
Q Consensus 358 ~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 436 (502)
...+..+++...+. .+.+++..+...++++++.+.|++. ++... ++..+++.+.....
T Consensus 254 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~~~------------------- 312 (369)
T PRK08153 254 MNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCGRD------------------- 312 (369)
T ss_pred CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECCCC-------------------
Confidence 12333444444442 3456677778888888999999876 67644 44555554443211
Q ss_pred ccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 437 QFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 437 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
......+.+++.++|..+..+....+..++|+++. +++++++++++|+++.+
T Consensus 313 --------~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~----~~~~~~~~~~al~~~~~ 364 (369)
T PRK08153 313 --------GAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG----PDEELDLFAEALPEALE 364 (369)
T ss_pred --------cccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHH
Confidence 12345778888888875533433234569999986 46799999999998765
No 217
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.75 E-value=1.4e-16 Score=160.62 Aligned_cols=234 Identities=12% Similarity=0.125 Sum_probs=161.5
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144 109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF 188 (502)
Q Consensus 109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (502)
..+|...++|+. ++++.|.+ .+++++||++|+..++. +.. +++.|+++...+...
T Consensus 51 ~~~p~~~~le~~----lA~leg~~---------~~v~~~sG~aAi~~~l~-~l~-----------~GD~VI~~~~~yg~~ 105 (364)
T PRK07269 51 TKNPTRAKLEET----LAAIESAD---------YALATSSGMSAIVLAFS-VFP-----------VGSKVVAVRDLYGGS 105 (364)
T ss_pred CCCccHHHHHHH----HHHHhCCC---------eEEEeCCHHHHHHHHHH-HhC-----------CCCEEEEecCCcCch
Confidence 356777777776 55665643 47889999999877663 322 567777776655432
Q ss_pred HHHHHHc-CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144 189 QKAAQIV-GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 189 ~~aa~~~-Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh 267 (502)
....... .-+ . +.+ .+.+|+++++++|+++++ +|+++.++|++|.+.|+++|+++|+++|++++
T Consensus 106 ~~~~~~~~~~~--~---~~~----~~~~d~~~l~~~i~~~Tk------lV~lesP~NPtg~~~di~~I~~la~~~gi~vv 170 (364)
T PRK07269 106 FRWFNQQEKEG--R---FHF----TYANTEEELIAAIEEDTD------IVYIETPTNPLMVEFDIEKVAKLAHAKGAKVI 170 (364)
T ss_pred HHHHHHHHhcC--c---EEE----EecCCHHHHHHhcCcCce------EEEEECCCCCCCeeeCHHHHHHHHHHcCCEEE
Confidence 2222211 110 1 111 134689999999976554 89999999999999999999999999999999
Q ss_pred eecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144 268 VDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV 345 (502)
Q Consensus 268 VDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (502)
||.+|+......| .. .++|.++.++||+++++.. .|+++++++........ ...+
T Consensus 171 vD~t~~~~~~~~p-l~------~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~-~~~~--------------- 227 (364)
T PRK07269 171 VDNTFYSPIYQRP-IE------LGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFY-NLNT--------------- 227 (364)
T ss_pred EECCCcccccCCc-hh------hCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHH-HHHH---------------
Confidence 9999866543322 11 2899999999999988765 56666666544322210 0000
Q ss_pred CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-ecCCCeeEEEEEee
Q 037144 346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV-AFPRNFSLVCFRVT 415 (502)
Q Consensus 346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l-~~~~~~~~v~f~~~ 415 (502)
.+....++..|..++. .+.+..++++..+++.++.+.|++.|++.- ..|+..++++|.+.
T Consensus 228 --------~G~~~s~~~a~l~~~~--L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 228 --------TGAVLSPFDSYLLMRG--LKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred --------hCCCCCHHHHHHHHcC--CCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEEC
Confidence 0112355667766664 466899999999999999999999998754 44777889999885
No 218
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.75 E-value=1.5e-15 Score=156.55 Aligned_cols=356 Identities=13% Similarity=0.024 Sum_probs=209.0
Q ss_pred CHHHHHHHHHHhhcCCCCCCCCCcc--cccCCCCCCHHHHHHHHHHhhcCC-----CCcccccChhhHHHHHHHHHHHHH
Q 037144 55 SVETILQDVQEHIVPGITHWQSPNY--FAYFPATSSVAGIVGEMLSSGFNV-----VGLDWISSPAAVELENIVMDWLGQ 127 (502)
Q Consensus 55 ~~~~il~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~l~~~~n~-----~~~~~~~~p~~~~le~~~~~~l~~ 127 (502)
.+.++.+.+.+.-.. |..+.. ++....+..++..+.+.+...+.. ....|...++..++.+.+.+|+.+
T Consensus 16 ~~~~~~~~~~~~~~~----~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~ 91 (409)
T PRK07590 16 LFPEIARRVNAFREA----NPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQ 91 (409)
T ss_pred hHHHHHHHHHHHhhh----cCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHH
Confidence 456666666654322 222322 222222223344555655554432 334566667788899999999888
Q ss_pred hcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCC------
Q 037144 128 MLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKN------ 201 (502)
Q Consensus 128 l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~------ 201 (502)
..|++-.. ...++|+|+++++.. +..... +++.|++..+++..+...++..|. .
T Consensus 92 ~~g~~~~~-----~~I~it~Ga~~al~~-l~~~~~-----------~gd~V~v~~P~Y~~~~~~~~~~g~---~~~~~~~ 151 (409)
T PRK07590 92 ARGCDISA-----DEIFISDGAKCDTGN-ILDIFG-----------PDNTIAVTDPVYPVYVDTNVMAGR---TGEANED 151 (409)
T ss_pred hcCCcCCh-----hhEEECCCHHHHHHH-HHHhcC-----------CCCEEEEeCCCCcchHHHHHHcCC---ccccccc
Confidence 77764221 268889998887654 322221 677888899999999999999998 6
Q ss_pred -----EEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccc
Q 037144 202 -----IRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYA 273 (502)
Q Consensus 202 -----v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g 273 (502)
++.+|++.++++..|.+. ..+.+|+++.++|+||.+-+ +++|+++|++||+|+++|.+|+
T Consensus 152 ~~~~~~~~v~~~~~~~~~~d~~~------------~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~ 219 (409)
T PRK07590 152 GRYSGIVYLPCTAENNFVPELPE------------EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYE 219 (409)
T ss_pred ccccceeEeecccccCCcccCcc------------cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccch
Confidence 888998754334444321 12446777899999999954 6678888999999999999997
Q ss_pred cccccCccchhhhcCCCCC-C--eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCC------cccccCccCCCCCccc
Q 037144 274 GSACICPEFRHFIDGVECV-D--SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTN------PQYLKNEATDQEPKEQ 343 (502)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~a-D--si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~------~~yl~~~~~~~~~~~~ 343 (502)
.+........ .+..+... + .+..++.|.++ ....+|+++.. +..+. .+... ..+.....
T Consensus 220 ~~~~~~~~~~-~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~-~~li~-~~~~~~~~~~~~~~~~~~~-------- 288 (409)
T PRK07590 220 AFISDPSLPH-SIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVP-KELKG-KTSDGEGVSLNSLWNRRQS-------- 288 (409)
T ss_pred hhccCCCCCc-chhhCCCcccceEEEecCccccCCcCceeEEEEcC-HHHhh-hccccchhhhHHHHHHHHh--------
Confidence 6543211111 11122221 2 33567999996 55677887763 33221 11000 00000000
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcch
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVM 420 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~ 420 (502)
... .....+...++...+ +.+.+++..+.+.+.++++.+.|++. ++++..+.....+++++++. .
T Consensus 289 ------~~~---~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~g~~f~wi~~~~~-~- 356 (409)
T PRK07590 289 ------TKF---NGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESA-GFEVYGGVNAPYIWVKTPDG-M- 356 (409)
T ss_pred ------hcc---cCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCcceEEEEECCCC-C-
Confidence 000 001223333333322 34566777888888899999999987 67765333344555555331 1
Q ss_pred hhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144 421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~ 497 (502)
+ ..++.+.+.++ |.++.++..+. +..++|+++. .++++++.+++.|.+
T Consensus 357 ------------------------~--~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~l~rl~~ 407 (409)
T PRK07590 357 ------------------------S--SWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAF---GSRENVLEAMERIKK 407 (409)
T ss_pred ------------------------C--HHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEcc---CCHHHHHHHHHHHHh
Confidence 0 13455565544 65444443332 3469999963 357799999988876
Q ss_pred H
Q 037144 498 H 498 (502)
Q Consensus 498 ~ 498 (502)
+
T Consensus 408 ~ 408 (409)
T PRK07590 408 A 408 (409)
T ss_pred h
Confidence 4
No 219
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.75 E-value=2e-15 Score=164.17 Aligned_cols=364 Identities=14% Similarity=0.116 Sum_probs=219.3
Q ss_pred chhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHH-------HHhhcCCCCccccc
Q 037144 38 PGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEM-------LSSGFNVVGLDWIS 110 (502)
Q Consensus 38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-------l~~~~n~~~~~~~~ 110 (502)
|..++..-+..+|+ +.+..++++++.++...|.. ...|.|--.-+.-+|+++.+. ++++ .+++.. .
T Consensus 31 P~~i~~~~~l~lp~-~~sE~e~~~~~~~la~~N~~---~~~fig~G~y~~~~p~~i~r~v~~~p~~~Tay-tPyQ~E--i 103 (939)
T TIGR00461 31 PPNILKRRPLQLEA-PSKEYEALAHLKKIASKNHK---FKSYIGMGYYGTILPPVIQRNLLENPGWYTAY-TPYQPE--I 103 (939)
T ss_pred CHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCC---ccccCCCCcCCCcCChHHHHHHHhCchhhhcC-CCCChh--h
Confidence 55565444456776 57999999999987655533 223444222223344445422 2222 233322 2
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH
Q 037144 111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK 190 (502)
Q Consensus 111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 190 (502)
+-+.-+.--+...+++++.|++.. +..+..++|.+.- |+..+.... + + ++.+|++++..|+....
T Consensus 104 sQG~Le~l~e~Qt~i~eLtGm~~a-------NaSl~d~atA~aE-a~~~a~~~~-~--~----~~~~vlv~~~~hP~~~~ 168 (939)
T TIGR00461 104 SQGRLEALLNFQTVVSDLTGLPVA-------NASLLDEGTAAAE-AMALSFNVS-K--K----KANKFFVAKDLHPQTKS 168 (939)
T ss_pred hhHHHHHHHHHHHHHHHHHCCChh-------hhhccchhhHHHH-HHHHHHHhh-c--C----CCCEEEECCCCCcchHH
Confidence 333333344456899999999864 3456666664432 333333211 0 0 24678999999987543
Q ss_pred ----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144 191 ----AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV 266 (502)
Q Consensus 191 ----aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l 266 (502)
-++..|+ +++.++. ++|++.+ ++ +.|+++.+ +..|.+.|+++|++++|+.|.++
T Consensus 169 v~~t~a~~~g~---~v~~~~~----------~~l~~~~--~~------~~v~~q~P-n~~G~ied~~~i~~~~h~~gal~ 226 (939)
T TIGR00461 169 VLHTRAKPFGI---EVIVVDC----------SDIKKAV--DV------FGCLLQYP-ATDGSILDYKQLIDALHSHKSLV 226 (939)
T ss_pred HHHHHHHhcCc---EEEEEcH----------HHHhhcC--CE------EEEEEECC-CCCeEEecHHHHHHHHHHcCCEE
Confidence 3467788 8888743 3455554 22 34555554 57899999999999999999999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-----CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144 267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-----TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK 341 (502)
Q Consensus 267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-----~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 341 (502)
+|++-.-+..++.+. ..+ ++|.++.+.++|+. +| ..|++.+++.- .+. .|..+.....+ .
T Consensus 227 ~~~ad~~al~ll~~P-ge~-----GaDi~vg~~q~fg~p~g~GGP-~aG~~a~~~~l--~r~---lPgrivG~s~D---~ 291 (939)
T TIGR00461 227 SVAADLMALTLLTPP-GHY-----GADIVLGSSQRFGVPMGYGGP-HAAFFAVKDEY--NRK---MPGRIVGVSKD---A 291 (939)
T ss_pred EEEechHHhCCcCCH-HHc-----CCcEEeeCCCccCCCCCCCCC-ceeeeeecHhh--Hhh---CCCCceeEEec---C
Confidence 996544333333322 222 89999555555543 34 48888887652 222 23333221111 1
Q ss_pred ccccCCCccccc----CCCCCCc----------hHHHHH--HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 037144 342 EQEVGYKDWQIT----LCRRFRS----------LKLWVV--IRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR 405 (502)
Q Consensus 342 ~~~~~~~~~~~~----~sr~~~a----------l~~~~~--l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~ 405 (502)
.+...+. ++++ --||-.+ +++.++ +.++|.+|++++.++...++.+|.+.|.+ .|++++.++
T Consensus 292 ~G~~~~~-l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~-~G~~~~~~~ 369 (939)
T TIGR00461 292 LGNTALR-LALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN-DPHELINKT 369 (939)
T ss_pred CCCccce-eecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-CCCcccCCC
Confidence 1111111 1111 2344322 232333 56679999999999999999999999998 599998877
Q ss_pred CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcH
Q 037144 406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTME 485 (502)
Q Consensus 406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~ 485 (502)
.+..+.++..... ..++.+++.++|+. +.. .....+++|+.. .+++
T Consensus 370 fF~~~~v~~~~~~-----------------------------~~~i~~~~~~~gi~-l~~---~~~~~i~~s~~E-~~t~ 415 (939)
T TIGR00461 370 WFDTLTVKVGNGI-----------------------------SSELLKAAEEFNIN-LRA---VDTTTVGIALDE-TTTK 415 (939)
T ss_pred ccceEEEEeCCCC-----------------------------HHHHHHHHHHCCCe-eee---cCCCEEEEEeec-CCCH
Confidence 7778888763111 34677777788875 222 223479999875 4667
Q ss_pred HHHHHHHHHHH
Q 037144 486 SHVRAAWTVVQ 496 (502)
Q Consensus 486 ~di~~~~~~l~ 496 (502)
+||+.+++.+.
T Consensus 416 ~di~~l~~~~~ 426 (939)
T TIGR00461 416 ADVENLLKVFD 426 (939)
T ss_pred HHHHHHHHHhc
Confidence 79999999884
No 220
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.75 E-value=5.2e-16 Score=155.20 Aligned_cols=273 Identities=14% Similarity=0.050 Sum_probs=175.0
Q ss_pred HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCC
Q 037144 119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID 198 (502)
Q Consensus 119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg 198 (502)
.++++++++++|.+.+ ..++|+|+++++.. +..+.. ++ .|+++...|..+...++..|+
T Consensus 50 ~~lr~~la~~~~~~~~-------~i~~t~G~~~~i~~-~~~~l~-----------~g-~vl~~~p~y~~~~~~~~~~g~- 108 (330)
T TIGR01140 50 DELRAAAAAYYGLPAA-------SVLPVNGAQEAIYL-LPRLLA-----------PG-RVLVLAPTYSEYARAWRAAGH- 108 (330)
T ss_pred HHHHHHHHHHhCCChh-------hEEECCCHHHHHHH-HHHHhC-----------CC-eEEEeCCCcHHHHHHHHHcCC-
Confidence 3455667777887643 57888888877654 332221 34 466777888899999999999
Q ss_pred CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccc
Q 037144 199 RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGS 275 (502)
Q Consensus 199 ~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~ 275 (502)
+++.++ |++.|++++++ + .+|+++.++|++|.+-+ +++|+++|+++|+++++|.+|..+
T Consensus 109 --~~~~~~---------d~~~l~~~~~~-~------~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~ 170 (330)
T TIGR01140 109 --EVVELP---------DLDRLPAALEE-L------DVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDF 170 (330)
T ss_pred --EEEEeC---------CHHHHHhhccc-C------CEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECccccc
Confidence 888876 67888888732 2 26778889999999987 667788889999999999999765
Q ss_pred cccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144 276 ACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL 354 (502)
Q Consensus 276 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 354 (502)
... +....... ...-+.++.+++|+++.| ..+|+++.++. .+. .+... ... ++
T Consensus 171 ~~~-~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~-~~~-~l~~~---~~~----------------~~--- 224 (330)
T TIGR01140 171 TPD-ASLAPQAA-RFPGLVVLRSLTKFFGLAGLRLGFVVAHPA-LLA-RLREA---LGP----------------WT--- 224 (330)
T ss_pred CCc-cchhhHhc-cCCCEEEEEecchhhcCchhhhhheeCCHH-HHH-HHHhc---CCC----------------CC---
Confidence 432 11111111 113457778899999844 56788887543 322 22111 000 00
Q ss_pred CCCCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcc
Q 037144 355 CRRFRSLKLWVVIRNFGV-ANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYD 433 (502)
Q Consensus 355 sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 433 (502)
...+...++.+.+.. +......++...+.+++.+.|++++.+++. ++...++++...+
T Consensus 225 ---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~~----------------- 283 (330)
T TIGR01140 225 ---VNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLEVV-GGTALFLLVRTPD----------------- 283 (330)
T ss_pred ---chHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcCC-----------------
Confidence 122333444444433 334667788889999999999998666654 3333333333211
Q ss_pred cccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144 434 QYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVV 495 (502)
Q Consensus 434 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l 495 (502)
..++.++|.+.|..+.++..+. +..++|++++. ..++ ++++++|
T Consensus 284 --------------~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~~---~~~~-~~~~~~l 329 (330)
T TIGR01140 284 --------------AAALHEALARRGILIRDFDNFPGLDPRYLRFALPT---DEEN-DRLEEAL 329 (330)
T ss_pred --------------HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEecC---HHHH-HHHHHhh
Confidence 2357777877787655554443 34699999863 4445 8888766
No 221
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.75 E-value=1.3e-15 Score=157.28 Aligned_cols=316 Identities=11% Similarity=0.060 Sum_probs=188.3
Q ss_pred hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144 114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ 193 (502)
Q Consensus 114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~ 193 (502)
....+.++.+.+++++|.+.+ ..++++||++|+..++..++... + ++.+++.+...|.+...+..
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~-------~v~~~~sgsea~~~al~~~~~~~-~-------~~~ii~~~~~yhg~~~~~~~ 141 (413)
T cd00610 77 YNEPAVELAELLLALTPEGLD-------KVFFVNSGTEAVEAALKLARAYT-G-------RKKIISFEGAYHGRTLGALS 141 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCCC-------EEEEcCcHHHHHHHHHHHHHHHc-C-------CCeEEEECCCcCCccHHHHH
Confidence 356677788889999885333 58999999999999999887531 0 23444445556665554444
Q ss_pred HcCCC---------CCCEEEEecCCC----CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHH
Q 037144 194 IVGID---------RKNIRAIKTTKS----SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLC 256 (502)
Q Consensus 194 ~~Glg---------~~~v~~v~~~~~----~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~ 256 (502)
..+-. ...++.+|.+.. .++..|+++|++.+++. +..+.+|+++...+++|.+.| +++|.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~ 218 (413)
T cd00610 142 LTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH---PEEVAAVIVEPIQGEGGVIVPPPGYLKALR 218 (413)
T ss_pred hcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC---CCCEEEEEEccccCCCCCccCCHHHHHHHH
Confidence 33220 114677776521 12355899999988652 123457777777778898877 99999
Q ss_pred HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccC
Q 037144 257 DVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEAT 336 (502)
Q Consensus 257 ~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~ 336 (502)
++|++||+++++|.+|+++............++ ..|.++++ |+++.++.+|+++.+ +... +.+. ...+....
T Consensus 219 ~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~g~~~g~~~~~-~~~~-~~~~-~~~~~~~~-- 290 (413)
T cd00610 219 ELCRKHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTLG--KGLGGGLPLGAVLGR-EEIM-DAFP-AGPGLHGG-- 290 (413)
T ss_pred HHHHHcCCEEEEeccccCCCcCcchhhHhhcCC-CCCeEEEc--ccccCccccEEEEEc-HHHH-Hhhc-cCCCCCCC--
Confidence 999999999999999976422111101001122 45766554 999887889988764 3332 2220 00111000
Q ss_pred CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEe--cCCCeeEEEEE
Q 037144 337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR-FEVA--FPRNFSLVCFR 413 (502)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~-~~l~--~~~~~~~v~f~ 413 (502)
+. .+.+.....+.++++.+.. .++.++..++++++++.|+++.. ..++ ......++++.
T Consensus 291 --------------t~-~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~ 352 (413)
T cd00610 291 --------------TF-GGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIE 352 (413)
T ss_pred --------------CC-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEE
Confidence 00 0111122344455555433 35667788888888888876521 1111 12345667776
Q ss_pred eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHH
Q 037144 414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWT 493 (502)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~ 493 (502)
+.+.... ..........+.+.+.++|..+ .+.. ...+|++++. ..++++|+++++
T Consensus 353 ~~~~~~~--------------------~~~~~~~~~~~~~~l~~~gv~v-~~~~---~~~lR~~~~~-~~t~~~i~~~~~ 407 (413)
T cd00610 353 LVKDRAT--------------------KPPDKELAAKIIKAALERGLLL-RPSG---GNVIRLLPPL-IITEEEIDEGLD 407 (413)
T ss_pred EecCCCc--------------------CCcchHHHHHHHHHHHHCCeEE-eecC---CCEEEEECCC-cCCHHHHHHHHH
Confidence 6542100 0000122456778888888643 3321 4579999864 456679999999
Q ss_pred HHHHH
Q 037144 494 VVQEH 498 (502)
Q Consensus 494 ~l~~~ 498 (502)
.|+++
T Consensus 408 ~l~~~ 412 (413)
T cd00610 408 ALDEA 412 (413)
T ss_pred HHHHh
Confidence 99875
No 222
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.75 E-value=6.7e-16 Score=157.96 Aligned_cols=221 Identities=14% Similarity=0.125 Sum_probs=153.8
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-- 187 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-- 187 (502)
..|...++|+ .+++++|.+. .+++++|+.|+..++.+... +++.|+++...|..
T Consensus 63 ~~p~~~~le~----~lA~l~g~~~---------~i~~~sG~~Al~~~l~~ll~-----------~Gd~Viv~~~~y~~t~ 118 (403)
T PRK07503 63 SNPTLALLEQ----RMASLEGGEA---------AVALASGMGAITATLWTLLR-----------PGDEVIVDQTLYGCTF 118 (403)
T ss_pred CCchHHHHHH----HHHHHhCCCc---------EEEEcCHHHHHHHHHHHHcC-----------CCCEEEEccCccchHH
Confidence 4555566664 4788888753 47788888887766654322 67788888777643
Q ss_pred --HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 188 --FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 188 --~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
....+...|+ +++.++.+ |+++|++++++.++ +|++..++|++|.+.|+++|+++|+++|++
T Consensus 119 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i~~~tk------lV~le~p~NPtG~~~di~~I~~la~~~gi~ 182 (403)
T PRK07503 119 AFLHHGLGEFGV---TVRHVDLT-------DPAALKAAISDKTR------MVYFETPANPNMRLVDIAAVAEIAHGAGAK 182 (403)
T ss_pred HHHHHHHhhCCE---EEEEeCCC-------CHHHHHHhcCccCc------EEEEeCCCCCCCeeeCHHHHHHHHHHcCCE
Confidence 3345566788 88888753 78999999876443 788889999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
+++|++|+.+....+ .. .++|.++.+++|+++++.+ .|+++ .+++.............
T Consensus 183 lIvD~a~a~~~~~~~-l~------~g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~~~l~~~~~~~~------------ 242 (403)
T PRK07503 183 VVVDNTYCTPYLQRP-LE------LGADLVVHSATKYLGGHGDITAGLVV-GGKALADRIRLEGLKDM------------ 242 (403)
T ss_pred EEEECCCcccccCCc-hh------hCCCEEEccccccccCCCceeEEEEE-cCHHHHHHHHhhhHHhC------------
Confidence 999999976543211 11 1789999999999987654 55554 55543322110000000
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
.+-+...+..|..++ +.+.+..++++..+++..+.+.|+++|.++.+
T Consensus 243 ----------~g~~~s~~~a~l~l~--~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V 289 (403)
T PRK07503 243 ----------TGAVMSPFDAFLLMR--GLKTLALRMDRHCASAQAVAEWLARHPAVELV 289 (403)
T ss_pred ----------cCCCCCHHHHHHHHc--CcchHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 011224556666665 45777888899999999999999999887754
No 223
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=9.3e-16 Score=157.53 Aligned_cols=241 Identities=13% Similarity=0.116 Sum_probs=153.5
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|...++|++ ++++.|.+ ..+++++|++|+..++.+... +++.|+++...|....
T Consensus 56 ~~pt~~~Le~~----lA~l~g~~---------~~l~~ssG~~Ai~~al~al~~-----------~Gd~Vl~~~~~Y~~t~ 111 (425)
T PRK06084 56 MNPTNDVLEQR----VAALEGGV---------GALAVASGMAAITYAIQTIAE-----------AGDNIVSVAKLYGGTY 111 (425)
T ss_pred CCchHHHHHHH----HHHHhCCC---------ceeEehhHHHHHHHHHHHHhC-----------CCCEEEEeCCCcchHH
Confidence 34555555554 67777753 357888999888777766543 5667777777666443
Q ss_pred HHH-H---HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 KAA-Q---IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ~aa-~---~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
..+ . ..|+ .+..++. .|+++|+++|+++++ +|+++.++|++|.+-|+++|.++|+++|++
T Consensus 112 ~~~~~~l~~~gi---~v~~~d~-------~d~e~le~ai~~~tk------lV~lesp~NPtG~v~dl~~I~~la~~~~i~ 175 (425)
T PRK06084 112 NLLAHTLPRIGI---ETRFAAH-------DDIAALEALIDERTK------AVFCESIGNPAGNIIDIQALADAAHRHGVP 175 (425)
T ss_pred HHHHHhccccee---EEEEECC-------CCHHHHHHHhccCCc------EEEEeCCCCCCCeecCHHHHHHHHHHcCCE
Confidence 333 2 2455 5555542 489999999976543 788889999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCch-hhhhh------h-cCCcccccCccC
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPS-CLLST------L-STNPQYLKNEAT 336 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~-~l~~~------~-~~~~~yl~~~~~ 336 (502)
++||++|+.+....+ .. .++|.++.++||+++++.. .|.+++.+.. ..... + ...+.|..-...
T Consensus 176 vVvD~a~a~~~~~~p-~~------~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (425)
T PRK06084 176 LIVDNTVATPVLCRP-FE------HGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYT 248 (425)
T ss_pred EEEECCCcccccCCh-hh------cCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhh
Confidence 999999986544322 11 1799999999999987643 3444443221 10000 0 111222110000
Q ss_pred CCCCcccccCCC-----cccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 337 DQEPKEQEVGYK-----DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 337 ~~~~~~~~~~~~-----~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
. ..+..... ......+-+..+..+|..++ |.+.+..++++..+++..+.+.|+++|+++-+
T Consensus 249 ~---~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lr--gl~tl~~R~~~~~~na~~la~~L~~~p~v~~V 314 (425)
T PRK06084 249 E---AFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQ--GLETLALRMERHTENALKVARYLQQHPQVAWV 314 (425)
T ss_pred h---hcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0 00000000 00111233345566676665 56888999999999999999999999987644
No 224
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.74 E-value=6e-16 Score=157.11 Aligned_cols=223 Identities=15% Similarity=0.143 Sum_probs=154.6
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|...++| +.++++.|.+ .+++++||++|+..++.+... +++.|+++...|.+..
T Consensus 49 ~~p~~~~le----~~lA~l~g~~---------~v~~~~gg~~Ai~~~l~all~-----------~GD~Vl~~~p~y~~~~ 104 (382)
T TIGR02080 49 GNPTRDLLQ----QALAELEGGA---------GAVVTNTGMSAIHLVTTALLG-----------PDDLLVAPHDCYGGTY 104 (382)
T ss_pred CCchHHHHH----HHHHHHhCCC---------cEEEEcCHHHHHHHHHHHHcC-----------CCCEEEEcCCCcHHHH
Confidence 344455555 4577887732 478999999988766655432 6778888888887544
Q ss_pred HHH-HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144 190 KAA-QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 190 ~aa-~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV 268 (502)
... .+.+.+.-++..++ ..|++++++++++++ .+|+++.++|++|.+-|+++|+++|+++|++++|
T Consensus 105 ~~~~~~~~~~~~~v~~~d-------~~d~~~l~~ai~~~t------klV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvv 171 (382)
T TIGR02080 105 RLLNALAKKGCFRVLFVD-------QGDEQALRAALAQKP------KLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVV 171 (382)
T ss_pred HHHHHHHhhcCeEEEEEC-------CCCHHHHHHhcCcCc------eEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence 432 23333111454443 237899999987543 3788899999999999999999999999999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144 269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG 346 (502)
Q Consensus 269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (502)
|.+|+.+....+ .. .++|.++.+++||++++.+ .|++.++++..... +.....++.
T Consensus 172 D~a~~~~~~~~p-l~------~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~-l~~~~~~~g-------------- 229 (382)
T TIGR02080 172 DNTFLSPALQNP-LA------LGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEE-LAWWANNLG-------------- 229 (382)
T ss_pred ECCCcccccCCc-hh------hCCCEEEeecceeccCCCCceeEEEEeCCHHHHHH-HHHHHHccC--------------
Confidence 999976543322 11 1689999999999987765 66666666544322 111111111
Q ss_pred CCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 347 YKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 347 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
....++..|..++ |.+-+..++++..+++..+.+.|++.|.++-+
T Consensus 230 ---------~~~sp~~a~l~lr--~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V 274 (382)
T TIGR02080 230 ---------VTGGAFDSYLTLR--GLRTLVARMRLQQRNAQAIVEYLQTQPLVKKI 274 (382)
T ss_pred ---------CCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence 1124566777765 55778888999999999999999999988744
No 225
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.74 E-value=1.3e-15 Score=152.42 Aligned_cols=279 Identities=10% Similarity=0.033 Sum_probs=179.8
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR 199 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~ 199 (502)
++++.+++.+|.+.. ..++|+|+++++..++. +.. ++.+|+. ++++..+..+++..|+
T Consensus 44 ~lr~~ia~~~~~~~~-------~I~it~Gs~~~l~~~~~-~~~-----------~~~vv~~-~P~y~~y~~~~~~~G~-- 101 (332)
T PRK06425 44 DIEDQIKIYTQGLKI-------KVLIGPGLTHFIYRLLS-YIN-----------VGNIIIV-EPNFNEYKGYAFTHGI-- 101 (332)
T ss_pred HHHHHHHHHhCCCcc-------eEEECCCHHHHHHHHHH-HhC-----------CCcEEEe-CCChHHHHHHHHHcCC--
Confidence 455667888888765 58899999998866553 221 4445544 7889999999999999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeeccccccc
Q 037144 200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSA 276 (502)
Q Consensus 200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~ 276 (502)
+++.||++. ..+|++.+++ . ++.+|+++.++|+||.+-+ +++|+++|+++|+|+++|.+|+.+.
T Consensus 102 -~v~~vp~~~---~~~~~~~l~~---~------~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~ 168 (332)
T PRK06425 102 -RISALPFNL---INNNPEILNN---Y------NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFV 168 (332)
T ss_pred -eEEEEeCCc---ccCcHHHHhh---c------CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccc
Confidence 999999874 3456655542 1 1336777899999999855 6777778899999999999997664
Q ss_pred ccCccchhhhcCCCCC-C-eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144 277 CICPEFRHFIDGVECV-D-SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT 353 (502)
Q Consensus 277 ~~~~~~~~~~~~~~~a-D-si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 353 (502)
... ........... . .+..++.|.++ ....+|+++.. +............+ ..
T Consensus 169 ~~~--~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~-~~li~~l~~~~~~~--------------------~~- 224 (332)
T PRK06425 169 PNR--AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATD-DYNMKISRKITEPW--------------------SV- 224 (332)
T ss_pred ccc--chhHHHHhccCCCEEEEeecHHhcCCchhhheeeecC-HHHHHHHHHcCCCC--------------------cc-
Confidence 321 11111111111 2 34457999998 55667887663 33332221111111 00
Q ss_pred CCCCCCchHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144 354 LCRRFRSLKLWVVIRNFGVAN-LRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTY 432 (502)
Q Consensus 354 ~sr~~~al~~~~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 432 (502)
....+ .++.....+. .++..+...+.++++.+.|++. ++++..++..+.++++++ .
T Consensus 225 -----~~~~~-~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~~~~-~--------------- 281 (332)
T PRK06425 225 -----CDPAI-DFIRSIDLDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITFMIP-D--------------- 281 (332)
T ss_pred -----CHHHH-HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEEEcC-C---------------
Confidence 11111 1222222222 3566777888899999999988 788765566666666653 1
Q ss_pred ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
..++.+.+.++|..+..+..+. +..++|+++. +.++.++++++|+++.
T Consensus 282 ---------------~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 282 ---------------AHDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR----RRSFNIKLVNALRNFL 331 (332)
T ss_pred ---------------HHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence 2456677777787665554442 2469999986 4569999999998764
No 226
>PRK03321 putative aminotransferase; Provisional
Probab=99.74 E-value=7.3e-16 Score=155.69 Aligned_cols=288 Identities=13% Similarity=0.061 Sum_probs=181.5
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH
Q 037144 112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA 191 (502)
Q Consensus 112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 191 (502)
++..+++ +.+++++|.+.+ ..++|+|+++++..++..... +++.|+++...+..+...
T Consensus 57 ~g~~~lr----~~ia~~~~~~~~-------~I~~~~G~~~~l~~~~~~~~~-----------~gd~Vli~~p~y~~~~~~ 114 (352)
T PRK03321 57 MGAVELR----AALAEHLGVPPE-------HVAVGCGSVALCQQLVQATAG-----------PGDEVIFAWRSFEAYPIL 114 (352)
T ss_pred CcHHHHH----HHHHHHhCcCHH-------HEEECCCHHHHHHHHHHHhcC-----------CCCEEEeCCCCHHHHHHH
Confidence 3444444 445666676543 578888877766544433221 677788887777777777
Q ss_pred HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH--hCCEEEee
Q 037144 192 AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ--FGIWVHVD 269 (502)
Q Consensus 192 a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~--~g~~lhVD 269 (502)
++..|+ +++.+|+++ ++.+|++++++++++.+ .+|+++.++|++|.+-|+++|.++|++ +|+++++|
T Consensus 115 ~~~~g~---~~~~v~~~~--~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~D 183 (352)
T PRK03321 115 VQVAGA---TPVQVPLTP--DHTHDLDAMAAAITDRT------RLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLD 183 (352)
T ss_pred HHHcCC---EEEEccCCC--CCCCCHHHHHHhhccCC------CEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEe
Confidence 888999 999999874 35899999999886533 377778999999999999999999987 59999999
Q ss_pred cccccccccCccchhhhcCCC-CCCee-EEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144 270 AAYAGSACICPEFRHFIDGVE-CVDSF-SFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG 346 (502)
Q Consensus 270 aA~g~~~~~~~~~~~~~~~~~-~aDsi-~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (502)
++|+.+..... ....+..+. .-+.+ +.++.|.++.| ..+|+++.. +... +.+... + ..
T Consensus 184 e~y~~~~~~~~-~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~-~~~~-~~~~~~--~--~~------------ 244 (352)
T PRK03321 184 EAYVEYVRDDD-VPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH-PEVI-AALRKV--A--VP------------ 244 (352)
T ss_pred chHHHhccCcC-CCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC-HHHH-HHHHHh--c--CC------------
Confidence 99976543211 101011111 12334 45689999744 457777763 3332 222211 0 00
Q ss_pred CCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhh
Q 037144 347 YKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRT 425 (502)
Q Consensus 347 ~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~ 425 (502)
+ ....+...++...+ ..+.+.+.+++..+.++++.+.|++. ++.+. ++..+.+.++....
T Consensus 245 ---~------~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~-~~~g~~i~i~l~~~-------- 305 (352)
T PRK03321 245 ---F------SVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA-GWTVP-PSQANFVWLPLGER-------- 305 (352)
T ss_pred ---C------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCCCEEEEeCCCC--------
Confidence 0 01233333333333 23445556666667777888888886 67653 44444544444211
Q ss_pred cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
..++.+.+.+.|..+ .+ + +...+|++++ +.+++++++++|+++..
T Consensus 306 ----------------------~~~~~~~l~~~gI~v-~~--~-~~~~iRi~~~----~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 306 ----------------------TADFAAAAAEAGVVV-RP--F-AGEGVRVTIG----APEENDAFLRAARAWRA 350 (352)
T ss_pred ----------------------HHHHHHHHHHCCEEE-Ec--c-CCCcEEEeeC----CHHHHHHHHHHHHHHhc
Confidence 235667777778654 33 2 3346999975 56699999999988754
No 227
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=8.3e-16 Score=158.27 Aligned_cols=239 Identities=13% Similarity=0.079 Sum_probs=159.4
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH-
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF- 188 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~- 188 (502)
.+|....+|+ .++++.|.+. .+++++|+.|+..++.+... +++.|+++...|.+.
T Consensus 61 ~~p~~~~le~----~lA~l~g~~~---------al~~~SG~~Ai~~al~all~-----------pGd~VIv~~~~y~~t~ 116 (427)
T PRK05994 61 TNPTNAVLEE----RVAALEGGTA---------ALAVASGHAAQFLVFHTLLQ-----------PGDEFIAARKLYGGSI 116 (427)
T ss_pred CCccHHHHHH----HHHHHhCCCc---------EEEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCcchhHH
Confidence 3455555555 4778887653 68889999999877766533 677888888888753
Q ss_pred ---HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 189 ---QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 189 ---~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
...+...|+ .++.++.+ |+++++++|++.+ .+|+++.++|++|.+-|+++|+++|+++|++
T Consensus 117 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~ai~~~t------klV~vesp~NptG~v~dl~~I~~la~~~gi~ 180 (427)
T PRK05994 117 NQFGHAFKSFGW---QVRWADAD-------DPASFERAITPRT------KAIFIESIANPGGTVTDIAAIAEVAHRAGLP 180 (427)
T ss_pred HHHHHHHHhcCc---EEEEECCC-------CHHHHHHhcCcCC------eEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 334567788 88888642 7899999987543 3788899999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCch-hhhhhhcCCcccccCccCCCCCccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPS-CLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~-~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
++||++++.+...-+ .. .++|.++.++||+++.+.+ .|.+++.... .+. . .....++...... .++
T Consensus 181 livD~a~a~~~~~~p-l~------~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~-~-~k~~~~~~~~~~~---~~~ 248 (427)
T PRK05994 181 LIVDNTLASPYLIRP-IE------HGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWS-K-SGKYPMLSEPRPE---YHG 248 (427)
T ss_pred EEEECCccccccCCc-cc------cCCcEEEEcCccccCCCCCcEEEEEEeCCccccc-c-ccccccccCCcch---hhh
Confidence 999999976543322 11 2899999999999987754 4555553221 100 0 0000111110000 000
Q ss_pred ccCCCc-------------ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 344 EVGYKD-------------WQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 344 ~~~~~~-------------~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
..-..+ ..-..+.....+.+|..++ |.+.+..++++..+++.++.+.|+++|+++-+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~--~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v 318 (427)
T PRK05994 249 LVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILT--GIETLPLRMQRHSDNALAVAEWLKGHPKVSWV 318 (427)
T ss_pred hhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 000000 0011233345566666665 56788999999999999999999999988644
No 228
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.74 E-value=1.4e-15 Score=156.51 Aligned_cols=328 Identities=12% Similarity=0.066 Sum_probs=202.0
Q ss_pred HHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEE--EcCCchHHHHHHHHHHHHHHHHH
Q 037144 91 GIVGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGV--IQGTTCEALLCTLTAARDRVLKK 167 (502)
Q Consensus 91 ~~~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~--~t~ggt~a~~~al~~a~~~~~~~ 167 (502)
..+.+.+..... .....|....+..++.+.+.+|+.+..+.+-.. ...+ .|.|++.|...++.+.+. ++.
T Consensus 50 ~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~-----~~v~~~~t~G~~~al~~~~~~l~~-~~~- 122 (404)
T PTZ00376 50 ESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAE-----KRIATVQALSGTGALRLGFEFLKR-FLP- 122 (404)
T ss_pred hHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCcccccc-----CeEEEeeccCcchHHHHHHHHHHH-hcC-
Confidence 334444433333 223567777788899999999986654422110 1345 488988887666543321 111
Q ss_pred hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
+++.|++.++++..+...++.+|+ +++.+|+.+++++.+|++.+++++++... ...+++.+.++|+||
T Consensus 123 ------~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~l~~~~~~~~d~~~l~~~~~~~~~---~~~~~~~~~p~NPTG 190 (404)
T PTZ00376 123 ------AGTTVYVSNPTWPNHVNIFKSAGL---NVKEYRYYDPKTKGLDFDGMLEDLRTAPN---GSVVLLHACAHNPTG 190 (404)
T ss_pred ------CCCEEEEcCCCchhHHHHHHHcCC---ceeeccccCcccCCcCHHHHHHHHHhCCC---CCEEEEeCCCCCCCC
Confidence 678899999999999999999999 99999985333579999999999865311 124677789999999
Q ss_pred cc---CChhHHHHHHHHhCCEEEeecccccccccCc--cchhh--hcCCCCCC-eeEEccCCcCC-CCCcceEEE--eeC
Q 037144 248 AV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHF--IDGVECVD-SFSFNPHKWLF-TTLDCCCLW--VKD 316 (502)
Q Consensus 248 ~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~--~~~~~--~~~~~~aD-si~~~~hK~l~-~p~~~g~~~--~r~ 316 (502)
.+ +.+++|+++|++||+|+++|.+|........ ..... +... .-. .+..++.|.++ .....|+++ +.+
T Consensus 191 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~-~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~ 269 (404)
T PTZ00376 191 VDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAER-GVEFLVAQSFSKNMGLYGERIGALHIVCAN 269 (404)
T ss_pred CCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhc-CCcEEEEEeCCCcccccccccceEEEEeCC
Confidence 98 4577888899999999999999976554211 11111 1111 112 44566999998 557788875 345
Q ss_pred chhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH--------HHHHHHHHHHHHHHHH
Q 037144 317 PSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV--------ANLRNFIRSHVGMAKL 388 (502)
Q Consensus 317 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~--------~g~~~~~~~~~~la~~ 388 (502)
+............+..... .+ ...+..+++...+.. +.+++..+++.++++.
T Consensus 270 ~~~~~~l~~~~~~~~~~~~-----------------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~ 329 (404)
T PTZ00376 270 KEEAANVLSQLKLIIRPMY-----------------SS---PPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQL 329 (404)
T ss_pred HHHHHHHHHHHHHHHhhhc-----------------CC---CchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4422111110000000000 00 022333444443321 1234555677888889
Q ss_pred HHHHHhcCC---CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEe
Q 037144 389 FERLVTSDK---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTH 465 (502)
Q Consensus 389 l~~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 465 (502)
+.+.|++.. +++.. +|..+++.|.-.+ .++.++|.++..+++.+
T Consensus 330 l~~~L~~~~~~~~~~~~-~p~gg~f~~~~~~--------------------------------~~~~~~L~~~~~v~v~p 376 (404)
T PTZ00376 330 LYDELKALGSPGDWEHI-INQIGMFSFTGLT--------------------------------KEQVERLIEKYHIYLLD 376 (404)
T ss_pred HHHHHHhcCCCCccccc-ccCceEEEecCCC--------------------------------HHHHHHHHHhCCEeecC
Confidence 999998862 24433 4555665553211 24455666664445444
Q ss_pred eeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 466 AIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 466 ~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
. + |+++++ .+.++++.++++|+++..
T Consensus 377 ~---~----Ris~~~--~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 377 N---G----RISVAG--LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred C---C----eEEEec--cCHHhHHHHHHHHHHHHh
Confidence 3 2 999964 466699999999998765
No 229
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.74 E-value=9.7e-16 Score=162.55 Aligned_cols=324 Identities=11% Similarity=0.097 Sum_probs=198.2
Q ss_pred HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK 200 (502)
Q Consensus 121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~ 200 (502)
..+..++.||.+.++ ++++|+|.+|..++.++.. +++.|++...+|-|+..++.+.|+
T Consensus 200 Ae~~AA~~fgAd~ty--------fvvNGTS~~n~av~~a~~~-----------~Gd~VLvdRN~HKSv~haLilsga--- 257 (714)
T PRK15400 200 AEEYIARVFNADRSY--------MVTNGTSTANKIVGMYSAP-----------AGSTVLIDRNCHKSLTHLMMMSDV--- 257 (714)
T ss_pred HHHHHHHHhCCCcEE--------EEeCchHHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---
Confidence 447789999999864 7888889999877776654 788999999999999999999999
Q ss_pred CEEEEecCCCCC---cccC-----HHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 201 NIRAIKTTKSSS---YGLS-----AESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 201 ~v~~v~~~~~~~---~~~d-----~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
..+.++...+.- +.++ ++.++++|++... .++|+.+++|.+ |..|.+-++++|+++|+.++ +|||.||
T Consensus 258 ~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~-ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAw 333 (714)
T PRK15400 258 TPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAW 333 (714)
T ss_pred eEEEecccccccCCccCCCccccCHHHHHHHHHhCcc-ccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccc
Confidence 999987654221 3445 8999999987543 246778888887 68999999999999999887 7999999
Q ss_pred ccccccCccchhhhcCC-CCC---C--eeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144 273 AGSACICPEFRHFIDGV-ECV---D--SFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG 346 (502)
Q Consensus 273 g~~~~~~~~~~~~~~~~-~~a---D--si~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (502)
|+.+.+.|.++... ++ .++ | .++-|.||.+.+-..++++.++..-. .+.+. ..|....
T Consensus 334 gah~~F~p~~~~~s-am~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd-~~~~n--~a~~m~~------------ 397 (714)
T PRK15400 334 VPYTNFSPIYEGKC-GMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVN-EETFN--EAYMMHT------------ 397 (714)
T ss_pred hhhhccCcccCCcC-hhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCCC-HHHHH--HHHHHHc------------
Confidence 99887777554221 11 245 5 89999999998877778877754311 01110 1111111
Q ss_pred CCcccccCCCCCCchHHHH----HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEecCCCe-eEEEEEee
Q 037144 347 YKDWQITLCRRFRSLKLWV----VIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR------FEVAFPRNF-SLVCFRVT 415 (502)
Q Consensus 347 ~~~~~~~~sr~~~al~~~~----~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~------~~l~~~~~~-~~v~f~~~ 415 (502)
.+.+ ...+.+ +.+.+....-.+++++..+++..|++.|.++++ |+++.+... ..-||.+.
T Consensus 398 -------STSP--sY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~ 468 (714)
T PRK15400 398 -------TTSP--HYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLR 468 (714)
T ss_pred -------CCCc--HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccC
Confidence 1111 111222 222232222356778888999999999988887 777743311 11234433
Q ss_pred cCc-chhhhh-hcc---cCCCcccccccc-----hhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcH
Q 037144 416 PSA-VMDKLR-TKY---KNGTYDQYRQFS-----EEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTME 485 (502)
Q Consensus 416 ~~~-~~~~~~-~~~---~~~~~~~~~~~~-----~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~ 485 (502)
|.. ..+.+. .+. .+-.+....++. +.++..--...+.+.|.+.|++ +-. .+...+=+.+ ++..++
T Consensus 469 p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~-~E~---~d~~~iLfl~-s~g~t~ 543 (714)
T PRK15400 469 SDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIV-VEK---TGPYNLLFLF-SIGIDK 543 (714)
T ss_pred ccccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCE-EEe---cCCCeEEEEe-CCCCCH
Confidence 221 000000 000 000000000000 0000111123455566666753 222 2233344444 466788
Q ss_pred HHHHHHHHHHHHHHH
Q 037144 486 SHVRAAWTVVQEHLE 500 (502)
Q Consensus 486 ~di~~~~~~l~~~~~ 500 (502)
+++++++++|.++.+
T Consensus 544 ~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 544 TKALSLLRALTDFKR 558 (714)
T ss_pred HHHHHHHHHHHHHHH
Confidence 899999999987643
No 230
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.74 E-value=1.1e-15 Score=154.97 Aligned_cols=309 Identities=13% Similarity=0.092 Sum_probs=188.7
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCC-CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLP-KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
..+.+.+....+. ..|....+..++.+.+.+|+.+.+|.+ -+. ...++|+|+++++..++.+..-.
T Consensus 43 ~~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~-----~~I~it~G~~~~i~~~~~~l~~~------ 109 (364)
T PRK07865 43 PVIQEALAAAADA--PGYPTTAGTPELREAIVGWLARRRGVTGLDP-----AAVLPVIGSKELVAWLPTLLGLG------ 109 (364)
T ss_pred HHHHHHHHHHHhh--CCCCCccCCHHHHHHHHHHHHHHcCCCCCCc-----ccEEEccChHHHHHHHHHHHcCC------
Confidence 4455555444332 256655667889999999999988764 211 26889999988876544433111
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|+++..+|..+..+++.+|+ +++.++. ++++++ . .+.+|+++.++|+||.+
T Consensus 110 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~---------~~~l~~---~------~~~~v~~~~p~NPtG~~ 164 (364)
T PRK07865 110 ----PGDVVVIPELAYPTYEVGARLAGA---TVVRADS---------LTELGP---Q------RPALIWLNSPSNPTGRV 164 (364)
T ss_pred ----CCCEEEECCCCcccHHHHHHhcCC---EEEecCC---------hhhCCc---c------cceEEEEcCCCCCCCcc
Confidence 677889999999999999999999 7777642 222221 1 23477777899999987
Q ss_pred ---CChhHHHHHHHHhCCEEEeecccccccccCccchhh---hcCCC-CCCeeEEccCCcCCCC-CcceEEEeeCchhhh
Q 037144 250 ---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF---IDGVE-CVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLL 321 (502)
Q Consensus 250 ---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~---~~~~~-~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~ 321 (502)
+.+++|.++|+++|+++++|.+|+......+..... ..+.. .-..++.+++|.++.| ..+|+++. ++....
T Consensus 165 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~-~~~~~~ 243 (364)
T PRK07865 165 LGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAG-DPALVA 243 (364)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEec-CHHHHH
Confidence 457788899999999999999997654321111100 00000 1126677899998644 45666544 444332
Q ss_pred hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144 322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFE 400 (502)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~ 400 (502)
. +.....+... ....+...++.+.+. .+.+++..+.+.++++.+.+.|++. |+.
T Consensus 244 ~-~~~~~~~~~~-----------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 298 (364)
T PRK07865 244 E-LLEVRKHAGM-----------------------MVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA-GFR 298 (364)
T ss_pred H-HHHHHHhcCC-----------------------CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCc
Confidence 2 2111000000 001222222333332 3445667777888889999999886 777
Q ss_pred EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEe
Q 037144 401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAA 478 (502)
Q Consensus 401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~ 478 (502)
+. +++.+++.|...+.. ...+.+.+.+.|..+.++..+. +..++|+++
T Consensus 299 ~~-~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~ 348 (364)
T PRK07865 299 VD-HSEAGLYLWATRGED-----------------------------CWDTVAWLAERGILVAPGDFYGPAGAQHVRVAL 348 (364)
T ss_pred cc-CCCccEEEEEeCCCC-----------------------------HHHHHHHHHHCCEEEeCccccCcCCCCEEEEEe
Confidence 65 455555443322211 1245566667787655544332 356999998
Q ss_pred cCCCCcHHHHHHHHHHHH
Q 037144 479 GNSMTMESHVRAAWTVVQ 496 (502)
Q Consensus 479 ~~~~t~~~di~~~~~~l~ 496 (502)
+. ++++++++++.|+
T Consensus 349 ~~---~~~~~~~~~~~l~ 363 (364)
T PRK07865 349 TA---TDERIAAAVERLA 363 (364)
T ss_pred cC---CHHHHHHHHHHhh
Confidence 74 4679999998774
No 231
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.74 E-value=5.1e-15 Score=157.08 Aligned_cols=232 Identities=13% Similarity=0.150 Sum_probs=163.4
Q ss_pred HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK 200 (502)
Q Consensus 121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~ 200 (502)
..+..++.||.+.++ ++++|+|.+|..++.++.. +++.|++...+|-|+..++.+.|+
T Consensus 200 Ae~~aA~~fgAd~ty--------fvvNGTS~~n~av~~a~~~-----------~Gd~VLvdRN~HKSv~~aLilsga--- 257 (713)
T PRK15399 200 AEEYIARTFGAEQSY--------IVTNGTSTSNKIVGMYAAP-----------AGSTLLIDRNCHKSLAHLLMMSDV--- 257 (713)
T ss_pred HHHHHHHHhCCCcEE--------EEeCChHHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---
Confidence 347789999998864 7888889999887777654 788999999999999999999999
Q ss_pred CEEEEecCCCCC---cccCH-----HHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE-Eeecc
Q 037144 201 NIRAIKTTKSSS---YGLSA-----ESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV-HVDAA 271 (502)
Q Consensus 201 ~v~~v~~~~~~~---~~~d~-----~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l-hVDaA 271 (502)
..+.++...... +.+++ +.++++|++.... ++|..+++|.+ |..|.+-++++|+++| |+.+ |||.|
T Consensus 258 ~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~-~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~ilvDEA 332 (713)
T PRK15399 258 VPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQA-QWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIHFDSA 332 (713)
T ss_pred eeEEecccccccCCcCCCChhhccHHHHHHHHHhCCCc-CCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEEEecc
Confidence 999987654221 34566 9999999876432 46778888887 6899999999999999 6765 89999
Q ss_pred cccccccCccchhh--hcCCCCCCee---EEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144 272 YAGSACICPEFRHF--IDGVECVDSF---SFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG 346 (502)
Q Consensus 272 ~g~~~~~~~~~~~~--~~~~~~aDsi---~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (502)
||+.+.+.|.+... +.+..++|.+ +-|.||.+.+-..++++.++..-. .+.+. ..|....+
T Consensus 333 hgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd-~~~~n--~a~~m~~S----------- 398 (713)
T PRK15399 333 WVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYD-EETFN--EAFMMHTS----------- 398 (713)
T ss_pred chhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCC-HHHHH--HHHHHHcC-----------
Confidence 99988777655422 2222357877 999999999888899998876411 11111 11111111
Q ss_pred CCcccccCCCCCCchHHHH----HHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEecC
Q 037144 347 YKDWQITLCRRFRSLKLWV----VIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKR------FEVAFP 404 (502)
Q Consensus 347 ~~~~~~~~sr~~~al~~~~----~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~------~~l~~~ 404 (502)
+.+ ...+.+ +.+.+. ..| ++++++..+++..+++.|.++.+ |+++.+
T Consensus 399 --------TSP--sY~LmASLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~ 456 (713)
T PRK15399 399 --------TSP--SYPIVASVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQP 456 (713)
T ss_pred --------CCc--HHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCc
Confidence 101 111222 222232 233 45778888899999999988766 677643
No 232
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.74 E-value=1.7e-15 Score=160.92 Aligned_cols=173 Identities=14% Similarity=0.100 Sum_probs=133.8
Q ss_pred HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH-HHHcCCCC
Q 037144 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA-AQIVGIDR 199 (502)
Q Consensus 121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a-a~~~Glg~ 199 (502)
..+..++.||.+.++ ++++|+|.+|..++.++.. +++.|++...+|-|+..+ ..+.|+
T Consensus 179 Aq~~AA~~fgAd~ty--------FlvNGTS~gn~a~i~a~~~-----------~Gd~VLvdRN~HKSv~hgaLiLsGa-- 237 (720)
T PRK13578 179 AQKHAAKVFNADKTY--------FVLNGTSASNKVVTNALLT-----------PGDLVLFDRNNHKSNHHGALIQAGA-- 237 (720)
T ss_pred HHHHHHHHhCCCceE--------EEeCChhHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHHcCC--
Confidence 447789999998864 8889999999887777654 788999999999999996 889999
Q ss_pred CCEEEEecCCCC---CcccCHHH-----HHHHHHHH-Hh--cCCcc-EEEEEecCCccccccCChhHHHHH-HHHhCCEE
Q 037144 200 KNIRAIKTTKSS---SYGLSAES-----VLSQINLD-VE--AELIP-LFLCATVGTTAITAVDPLKPLCDV-AKQFGIWV 266 (502)
Q Consensus 200 ~~v~~v~~~~~~---~~~~d~~~-----Le~~i~~~-~~--~g~~p-~~Vv~t~gtt~~G~idpl~eI~~i-~~~~g~~l 266 (502)
..++++...+. -+.++++. ++++|++. .+ +..+| .++++|.+ |..|.+-++++|+++ |+.++ .+
T Consensus 238 -~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h~~~-~l 314 (720)
T PRK13578 238 -TPVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHLCD-YI 314 (720)
T ss_pred -eEEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhccCC-cE
Confidence 99998765422 13456555 89888765 11 22345 56777765 489999999999998 68888 99
Q ss_pred EeecccccccccCccchhhh--cCCCCCC----eeEEccCCcCCCCCcceEEEeeCc
Q 037144 267 HVDAAYAGSACICPEFRHFI--DGVECVD----SFSFNPHKWLFTTLDCCCLWVKDP 317 (502)
Q Consensus 267 hVDaA~g~~~~~~~~~~~~~--~~~~~aD----si~~~~hK~l~~p~~~g~~~~r~~ 317 (502)
|||.|||+.+.+.|.++.+. ..-.++| .++-|.||.+.+-..++++.+++.
T Consensus 315 lvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~ 371 (720)
T PRK13578 315 LFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDN 371 (720)
T ss_pred EEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCc
Confidence 99999999987777543321 1123788 999999999988888888888764
No 233
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.73 E-value=8.8e-16 Score=155.49 Aligned_cols=320 Identities=15% Similarity=0.080 Sum_probs=195.0
Q ss_pred HHHHhhcCCCCccccc-ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCC
Q 037144 95 EMLSSGFNVVGLDWIS-SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENI 173 (502)
Q Consensus 95 ~~l~~~~n~~~~~~~~-~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~ 173 (502)
+.+...+... .+.. ++...++|++ +++++|.+ .++.+++||.|+..|+.+..-.
T Consensus 9 ~~v~~~l~s~--~~~~~g~~~~~fE~~----~a~~~g~~---------~~~~~~sgt~Al~~al~~l~~~---------- 63 (363)
T PF01041_consen 9 DAVLEVLRSG--WLSTYGPYVEEFEKE----FAEYFGVK---------YAVAVSSGTSALHLALRALGLG---------- 63 (363)
T ss_dssp HHHHHHHHHT--CCSSSSHHHHHHHHH----HHHHHTSS---------EEEEESSHHHHHHHHHHHTTGG----------
T ss_pred HHHHHHHHhC--CccCCCHHHHHHHHH----HHHHhCCC---------eEEEeCChhHHHHHHHHhcCCC----------
Confidence 3444444333 2333 6778888887 45666644 4789999999999888875322
Q ss_pred CCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChh
Q 037144 174 SKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLK 253 (502)
Q Consensus 174 ~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~ 253 (502)
++++|+++..+..+...++...|+ .++.++++++ ++.||++.|+++|++.++ +|++++ ..|...+++
T Consensus 64 ~gdeVi~p~~t~~~~~~ai~~~G~---~pv~~Di~~~-~~~id~~~~~~~i~~~t~------ai~~~h---~~G~~~d~~ 130 (363)
T PF01041_consen 64 PGDEVIVPAYTFPATASAILWAGA---EPVFVDIDPE-TLNIDPEALEKAITPKTK------AILVVH---LFGNPADMD 130 (363)
T ss_dssp TTSEEEEESSS-THHHHHHHHTT----EEEEE-BETT-TSSB-HHHHHHHHHTTEE------EEEEE----GGGB---HH
T ss_pred cCceEecCCCcchHHHHHHHHhcc---EEEEEeccCC-cCCcCHHHHHHHhccCcc------EEEEec---CCCCcccHH
Confidence 688999999999999999999999 9999999964 699999999999998764 566655 788888999
Q ss_pred HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEcc--CCcCCCCCcceEEEeeCchhhhhhhcCCcccc
Q 037144 254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNP--HKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYL 331 (502)
Q Consensus 254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~--hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl 331 (502)
+|.++|+++|++++-|+|++.+...-. ...|- ..|.-++|+ .|.+.+. ..|+++++++............-.
T Consensus 131 ~i~~~~~~~~i~lIeD~a~a~g~~~~g----~~~G~-~gd~~~fSf~~~K~i~~g-eGG~v~~~~~~~~~~~~~~~~~g~ 204 (363)
T PF01041_consen 131 AIRAIARKHGIPLIEDAAQAFGARYKG----RPVGS-FGDIAIFSFHPTKIITTG-EGGAVVTNDPELAERARALRNHGR 204 (363)
T ss_dssp HHHHHHHHTT-EEEEE-TTTTT-EETT----EETTS-SSSEEEEESSTTSSS-SS-S-EEEEESTHHHHHHHHHHTBTTE
T ss_pred HHHHHHHHcCCcEEEccccccCceeCC----EeccC-CCCceEecCCCCCCCcCC-CCeeEEecHHHHHHHhhhhhccCc
Confidence 999999999999999999987654322 11121 346666665 5887443 457777777754332211100000
Q ss_pred cCccCCCCCcccccCCCccccc--CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC---
Q 037144 332 KNEATDQEPKEQEVGYKDWQIT--LCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN--- 406 (502)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~--~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~--- 406 (502)
.... ...+..+ .+..++.-.+-+++-....+.+.+.+++..++++++.+.|...+++..+..+.
T Consensus 205 ~~~~-----------~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~ 273 (363)
T PF01041_consen 205 SRDA-----------FRRYRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAE 273 (363)
T ss_dssp ETSE-----------CSTTEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTE
T ss_pred Cccc-----------cccccccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCccccccccccc
Confidence 0000 0000000 11122222233333333347788999999999999999999999987765322
Q ss_pred ---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee--------ECC-----
Q 037144 407 ---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI--------VGG----- 470 (502)
Q Consensus 407 ---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~g----- 470 (502)
...+.+++.+... ....+|.+.|.++|.-...+.. +..
T Consensus 274 ~~~~~~f~i~~~~~~~--------------------------~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~ 327 (363)
T PF01041_consen 274 RSSYYRFPIRLPDEAL--------------------------ADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYA 327 (363)
T ss_dssp EBCESSEEEEETCCGC--------------------------STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEE
T ss_pred cccccccccccccccc--------------------------chHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccc
Confidence 1133444443210 0135677888888874322110 000
Q ss_pred -----------EEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144 471 -----------IYVLRFAAGNSMTMESHVRAAWTVVQ 496 (502)
Q Consensus 471 -----------~~~lR~~~~~~~t~~~di~~~~~~l~ 496 (502)
...|-+-+ ++..+++|+++++++|+
T Consensus 328 ~~~~P~ae~l~~r~l~LP~-~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 328 PGDLPNAERLSQRLLSLPI-HPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp TSSSHHHHHHHHHEEEEEH-STTSCHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHhCeEECcC-CCCCCHHHHHHHhhccC
Confidence 12455553 56677889999999875
No 234
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.73 E-value=4.8e-15 Score=152.26 Aligned_cols=292 Identities=14% Similarity=0.124 Sum_probs=178.5
Q ss_pred HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCC
Q 037144 119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID 198 (502)
Q Consensus 119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg 198 (502)
.++.+++++++|.+.. ...++++||++|+..++..++.. + +..+|.+....|.+...+....|..
T Consensus 88 ~~la~~l~~~~~~~~~------~~v~~~~sgsea~~~al~~~~~~-----g----~~~ii~~~~~yhg~~~~~~~~~~~~ 152 (398)
T PRK03244 88 IALAERLVELLGAPEG------GRVFFCNSGAEANEAAFKLARLT-----G----RTKIVAAEGGFHGRTMGALALTGQP 152 (398)
T ss_pred HHHHHHHHHhCCCCCC------CEEEEeCchHHHHHHHHHHHHHH-----C----CCeEEEECCCcCCccHHHHhccCCc
Confidence 4677788888885421 15899999999999999988763 1 2345555444555544444443321
Q ss_pred C---------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCE
Q 037144 199 R---------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIW 265 (502)
Q Consensus 199 ~---------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~ 265 (502)
. .++..+|. .|+++|++.+.+ .+.+|++....+++|.+-| +++|.++|++||++
T Consensus 153 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~------~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~l 219 (398)
T PRK03244 153 AKRAPFEPLPGGVEHVPY-------GDVDALAAAVDD------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGAL 219 (398)
T ss_pred ccccCCCCCCCCceEeCC-------CCHHHHHHhhcC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 0 02333332 378999988842 2457777888899999977 89999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV 345 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (502)
+++|.+|.++......+.....++ ..|.+++ .|+++.++..|.++.++. . .+.+... ...
T Consensus 220 lI~DEv~~g~gr~g~~~~~~~~~~-~pDi~t~--sK~l~~G~~ig~~~~~~~-~-~~~~~~~---~~~------------ 279 (398)
T PRK03244 220 LVLDEVQTGIGRTGAWFAHQHDGV-TPDVVTL--AKGLGGGLPIGACLAFGP-A-ADLLTPG---LHG------------ 279 (398)
T ss_pred EEEeccccCCcccchHHhhhhhCC-CCCEEEE--chhhhCCcccEEEEEcHH-H-HhhccCC---CCc------------
Confidence 999999976432211111111223 4677766 599987778899888654 2 2233110 000
Q ss_pred CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCeeEEEEEeecCcchhhh
Q 037144 346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF--PRNFSLVCFRVTPSAVMDKL 423 (502)
Q Consensus 346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~--~~~~~~v~f~~~~~~~~~~~ 423 (502)
.++ .+.+........+++.+.. .+..++..++.++|++.|+++ ++.++. .....++.+.+.+.
T Consensus 280 ----~t~-~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~~~i~~~~~------ 344 (398)
T PRK03244 280 ----STF-GGNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLTAP------ 344 (398)
T ss_pred ----CCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhc-CCCceeeEeeccEEEEEEEecc------
Confidence 011 1111122233334443433 245677788899999999885 232221 12334555555321
Q ss_pred hhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 424 RTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
...++.+++.++|.++ .+. +..+||++... ..+++||+++++.|+++.++
T Consensus 345 -----------------------~~~~~~~~l~~~Gv~~-~~~---~~~~iR~~p~~-~~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 345 -----------------------VAKAVEAAAREAGFLV-NAV---APDVIRLAPPL-IITDAQVDAFVAALPAILDA 394 (398)
T ss_pred -----------------------HHHHHHHHHHHCCeEE-eec---CCCEEEEECCC-cCCHHHHHHHHHHHHHHHHh
Confidence 1356778888888654 331 23689999753 34577999999999988754
No 235
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.73 E-value=6.2e-17 Score=145.17 Aligned_cols=166 Identities=23% Similarity=0.174 Sum_probs=126.8
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH-HHHHHcCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ-KAAQIVGID 198 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~-~aa~~~Glg 198 (502)
++.++++++++.+.. .+++++|||+|+..++.+++. ++..|+++...|.+.. ..+...|+
T Consensus 4 ~~~~~l~~~~~~~~~-------~~~~~~~~t~a~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~~~~~g~- 64 (170)
T cd01494 4 ELEEKLARLLQPGND-------KAVFVPSGTGANEAALLALLG-----------PGDEVIVDANGHGSRYWVAAELAGA- 64 (170)
T ss_pred HHHHHHHHHcCCCCC-------cEEEeCCcHHHHHHHHHHhCC-----------CCCEEEEeecccceehhhHHHhcCC-
Confidence 567889999963332 588999999999888877653 3567888888998887 78888999
Q ss_pred CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccccc
Q 037144 199 RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI 278 (502)
Q Consensus 199 ~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~ 278 (502)
+++.++.+..+....+.+.+++.. .+..|.+|+++.+++++|...|+++|+++|+++|+++|+|++|+++...
T Consensus 65 --~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~ 137 (170)
T cd01494 65 --KPVPVPVDDAGYGGLDVAILEELK-----AKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASP 137 (170)
T ss_pred --EEEEeccCCCCccchhhhhhhhcc-----ccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEeccccccccc
Confidence 999999875432222322333321 2345778999999999999999999999999999999999999887765
Q ss_pred CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEee
Q 037144 279 CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVK 315 (502)
Q Consensus 279 ~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r 315 (502)
.+... ....++|+++.++|||++. .++|++++|
T Consensus 138 ~~~~~---~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 138 APGVL---IPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred ccccc---cccccCCEEEEEcccccCC-CceEEEEeC
Confidence 43211 1123799999999999988 689999875
No 236
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.73 E-value=3.2e-15 Score=151.21 Aligned_cols=308 Identities=12% Similarity=0.069 Sum_probs=186.9
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCC-CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLP-KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
+..+.+.+..... ...|....+..++.+++.+|+.+.+|.+ -.. ...++|+|+++++..++.+..-.
T Consensus 36 ~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-----~~I~it~G~~~~i~~~~~~l~~~----- 103 (357)
T TIGR03539 36 PPLIRAALAAAAD--APGYPQTWGTPELREAIVDWLERRRGVPGLDP-----TAVLPVIGTKELVAWLPTLLGLG----- 103 (357)
T ss_pred CHHHHHHHHHHHh--hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCc-----CeEEEccChHHHHHHHHHHHcCC-----
Confidence 3444555544332 2345555667889999999999987764 221 26888999998876554433111
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|++++.+|..+...++.+|+ +++.++ |++.++. + .+.+|+++.++|+||.
T Consensus 104 -----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~---------~~~~l~~---~------~~~~v~~~~p~NPtG~ 157 (357)
T TIGR03539 104 -----PGDTVVIPELAYPTYEVGALLAGA---TPVAAD---------DPTELDP---V------GPDLIWLNSPGNPTGR 157 (357)
T ss_pred -----CCCEEEECCCCcHHHHHHHHhcCC---EEeccC---------ChhhcCc---c------CccEEEEeCCCCCcCc
Confidence 678889999999999988899998 776663 1222221 1 2347778889999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhc-----CCCCCCeeEEccCCcCCCC-CcceEEEeeCchh
Q 037144 249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID-----GVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSC 319 (502)
Q Consensus 249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~-----~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~ 319 (502)
.-+ +++|.++|+++|+++++|.+|+.....-+ ....+. +...-..+..+++|.++.| ..+|+++. ++..
T Consensus 158 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~-~~~~ 235 (357)
T TIGR03539 158 VLSVDELRAIVAWARERGAVVASDECYLELGWEGR-PVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAG-DPAL 235 (357)
T ss_pred cCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCC-CccceecccCCCccccEEEEeccccccCCCceeEEEEec-CHHH
Confidence 854 77799999999999999999965432111 101111 0001125566899998544 44566653 4433
Q ss_pred hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144 320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKR 398 (502)
Q Consensus 320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~ 398 (502)
........ .+.. . ....+...++...+. ...+....+++.++++++.+.|++. +
T Consensus 236 ~~~~~~~~-~~~~-~----------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g 290 (357)
T TIGR03539 236 VAELLTVR-KHAG-L----------------------MVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA-G 290 (357)
T ss_pred HHHHHHHH-hhcc-c----------------------CCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 22211111 0000 0 002222333333332 3445666677778888899999886 6
Q ss_pred eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE--CCEEEEEE
Q 037144 399 FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV--GGIYVLRF 476 (502)
Q Consensus 399 ~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~g~~~lR~ 476 (502)
+.+. +|..+++.|...+.. ...+.+.+.+.|..+.++..+ .+..++|+
T Consensus 291 ~~~~-~p~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRi 340 (357)
T TIGR03539 291 FRID-HSEAGLYLWATRGED-----------------------------AWDTVDRLAELGILVAPGDFYGPAGSQHVRV 340 (357)
T ss_pred CCCc-CCCccEEEEEECCCC-----------------------------HHHHHHHHHhCCEEECCccccCCCCCCeEEE
Confidence 7654 566676666543321 234666676778755443322 23579999
Q ss_pred EecCCCCcHHHHHHHHHHH
Q 037144 477 AAGNSMTMESHVRAAWTVV 495 (502)
Q Consensus 477 ~~~~~~t~~~di~~~~~~l 495 (502)
++++ ++++++++++.|
T Consensus 341 s~~~---~~~~i~~~~~~l 356 (357)
T TIGR03539 341 ALTA---TDERIAAAVARL 356 (357)
T ss_pred EecC---CHHHHHHHHHhh
Confidence 9974 467899988765
No 237
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.73 E-value=1.6e-15 Score=157.82 Aligned_cols=371 Identities=11% Similarity=0.093 Sum_probs=207.3
Q ss_pred CCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHH-HHhcCC--CCccCcCCCCcEEEcCCchHHHHHHHHHHHH
Q 037144 86 TSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL-GQMLDL--PKSFLFSGNGGGVIQGTTCEALLCTLTAARD 162 (502)
Q Consensus 86 ~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l-~~l~g~--~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~ 162 (502)
+..+|..+-++..+... ..|...++..++.+++++++ .+.++. +.. +....++|+|+++++..++.+...
T Consensus 111 ~~~~~~~v~e~~~~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~----~~~~I~vT~Ga~~al~~~~~aL~~ 183 (527)
T PRK09275 111 GFDADEFVYELVDGIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPK----GEFDLFAVEGGTAAMCYIFDSLKE 183 (527)
T ss_pred CCCCCHHHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCC----CcCeEEEeCCHHHHHHHHHHHHhh
Confidence 34556777776555543 24887788888888888755 443332 111 001689999999998877765321
Q ss_pred H-HHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec
Q 037144 163 R-VLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV 241 (502)
Q Consensus 163 ~-~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~ 241 (502)
. .++ +++.|++..+.+..+...+++.|.|. .++.++.+++++|.+|+++|++++++.++ +|+++.
T Consensus 184 ~~ll~-------pGD~Vlv~~P~y~~Y~~~~~l~g~~~-~~v~v~~~~~~~f~~d~~~l~~~~~~~tk------ai~l~n 249 (527)
T PRK09275 184 NGLLK-------AGDKIALMTPIFTPYLEIPELPRYDL-EVVHINADEENEWQYPDSELEKLRDPSIK------ALFLVN 249 (527)
T ss_pred hhcCC-------CCCEEEEeCCChHHHHHHHHHcCCCe-EEEEeecCcccCCCCCHHHHHhhcCCCCC------EEEEeC
Confidence 1 111 78889999999999999989887621 44555555444689999999998765443 788889
Q ss_pred CCccccccCC---hhHHHHHHHH--hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEee
Q 037144 242 GTTAITAVDP---LKPLCDVAKQ--FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVK 315 (502)
Q Consensus 242 gtt~~G~idp---l~eI~~i~~~--~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r 315 (502)
++|+||.+-+ +++|+++|++ +++|+++|.+|+.+.. .+.........--.+..++.|.++ ..+..|+++..
T Consensus 250 P~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~ 326 (527)
T PRK09275 250 PSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD---DFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALH 326 (527)
T ss_pred CcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc---cccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcC
Confidence 9999999965 7888888965 4999999999986542 222222111122245567899996 55667887765
Q ss_pred CchhhhhhhcCCc--------ccccCccCCCCCcccccCCCcccccCCC--------CCCchHHHH-----HHHHh--cH
Q 037144 316 DPSCLLSTLSTNP--------QYLKNEATDQEPKEQEVGYKDWQITLCR--------RFRSLKLWV-----VIRNF--GV 372 (502)
Q Consensus 316 ~~~~l~~~~~~~~--------~yl~~~~~~~~~~~~~~~~~~~~~~~sr--------~~~al~~~~-----~l~~~--g~ 372 (502)
+...+...+...+ .++..-..+ .....+.+.-..-+| .......++ ....+ +.
T Consensus 327 ~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~----p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~ 402 (527)
T PRK09275 327 EDNVFDKLIAKLPEEKKKELDKRYSSLTTD----PEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEED 402 (527)
T ss_pred chhHHHHHHHhccHHHHHHHHhhhhhccCC----cchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCch
Confidence 5422111111000 000000000 000111110000000 011111121 12222 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHH
Q 037144 373 ANLRNFIRSHVGMAKLFERLVTSDKRFEVA-FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNREL 451 (502)
Q Consensus 373 ~g~~~~~~~~~~la~~l~~~l~~~~~~~l~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 451 (502)
+...+..+.+.++++.+.+.| ++.+. .+|.....+|.-.+..... ..+.. ...+-.......++
T Consensus 403 ~~~~~~~~~~~~Rr~~l~~~L----g~~~~~~~p~g~fY~~~di~~~~~~------~~g~~-----f~~~l~~~~~~~~f 467 (527)
T PRK09275 403 AYKKAMKDIIRRRYKALYEGL----GLPEPEDPNNAAYYTLIDLEEWAEK------NYGKE-----FADYLKKNYSPVDL 467 (527)
T ss_pred HHHHHHHHHHHHHHHHHHHHc----CCCCcCCCCCeeEEEEEEhHHhhhh------ccCch-----hhhhhhccCCHHHH
Confidence 556677777778888887777 23322 2566666665432210000 00000 00000000012355
Q ss_pred HHHHHhc-CcEEEEeeeEC-CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 452 LESINVS-GKVFMTHAIVG-GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 452 ~~~l~~~-g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+.+|.++ |.+++++..++ +..++|+|+++ .+++++..+.+.|++++++
T Consensus 468 ~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~--~~~~~~~~~~~rl~~~l~~ 517 (527)
T PRK09275 468 LFRLAEETGVVLLPGGGFGGPEWSVRVSLAN--LNEEDYAKIGKAIRKLLDE 517 (527)
T ss_pred HHHHHhcCCEEEeCchhhCCCCCeEEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 5566555 55555555554 35689999976 3677999999999888764
No 238
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.73 E-value=8.9e-15 Score=150.43 Aligned_cols=298 Identities=12% Similarity=0.064 Sum_probs=174.4
Q ss_pred HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC-
Q 037144 119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI- 197 (502)
Q Consensus 119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl- 197 (502)
.++.+.+++++|.+ ..++++|||+|+..|+.++|.......+....+..+|..+...|-+..-+....+-
T Consensus 86 ~~l~~~l~~~~~~~---------~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~ 156 (401)
T PRK00854 86 APLYEELAALTGSH---------KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDP 156 (401)
T ss_pred HHHHHHHHhhCCCC---------EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCc
Confidence 33445566777653 47999999999999999998642211111100124555555567654433321110
Q ss_pred --------CCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCE
Q 037144 198 --------DRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIW 265 (502)
Q Consensus 198 --------g~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~ 265 (502)
....+..+| ..|+++|+++|.+. +.+|++..+.+++|.+-| +++|.++|++||++
T Consensus 157 ~~~~~~~~~~~~~~~~~-------~~d~~~le~~i~~~------~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~ 223 (401)
T PRK00854 157 DARGGFGPFTPGFRVVP-------FGDAEALEAAITPN------TVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVT 223 (401)
T ss_pred cccccCCCCCCCeEEeC-------CCCHHHHHHHhCCC------eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 001233343 24889999988643 348889999999999876 99999999999999
Q ss_pred EEeecccccccccCcc-chhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 266 VHVDAAYAGSACICPE-FRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~-~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
+++|++|.+... .+. +.....++ ..|.++++ |++...+ ..|+++.++. .+ +.+.. ....
T Consensus 224 lI~DEv~~g~g~-~g~~~~~~~~g~-~~D~~~~~--K~l~gg~~~ig~v~~~~~-~~-~~l~~----~~~~--------- 284 (401)
T PRK00854 224 LILDEIQTGLGR-TGKLLAEEHEGI-EADVTLIG--KALSGGFYPVSAVLSNSE-VL-GVLKP----GQHG--------- 284 (401)
T ss_pred EEEechhhCCCC-CchHhHHhhcCC-CCCEEEec--ccccCCccCeEEEEEcHH-HH-hcccC----CCCC---------
Confidence 999999975322 221 11111223 46877774 9997653 5677766443 22 22211 0000
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCeeEEEEEeecCcchh
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF--PRNFSLVCFRVTPSAVMD 421 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~--~~~~~~v~f~~~~~~~~~ 421 (502)
.++ ++.+..+....++|+.+.. ..+.++..++++++.+.|+++. +..+. .+...++.|.+.+..
T Consensus 285 ------~t~-~~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~g~g~~~~i~~~~~~--- 350 (401)
T PRK00854 285 ------STF-GGNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVELEPEA--- 350 (401)
T ss_pred ------CCC-CcCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhc-cCceEEEeccceEEEEEEecCc---
Confidence 001 1111122233333433322 2366788889999999998863 22221 233445555553321
Q ss_pred hhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 422 KLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
....++.+.|.++|... .+ .+..++|++.. ...++++|+++++.|+++..
T Consensus 351 ------------------------~~~~~~~~~L~~~GV~v-~~---~~~~~lR~~p~-~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 351 ------------------------GGARQYCEALKERGLLA-KD---THDHTIRLAPP-LVITREQVDWALEQIAKVLA 400 (401)
T ss_pred ------------------------hhHHHHHHHHHHCCeEE-ec---CCCCEEEEeCC-cccCHHHHHHHHHHHHHHhh
Confidence 11346777777788643 22 23468999974 44677799999999988753
No 239
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=1e-15 Score=155.22 Aligned_cols=219 Identities=16% Similarity=0.178 Sum_probs=151.4
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|....+|+ .++++.|.+. .+++++|+.++..++ .... +++.|+++...|.+..
T Consensus 48 ~~p~~~~Le~----~lA~l~g~~~---------~~~~~sG~aai~~~~-~~l~-----------~Gd~Viv~~~~y~~~~ 102 (377)
T PRK07671 48 GNPTRAALEE----LIAVLEGGHA---------GFAFGSGMAAITAVM-MLFS-----------SGDHVILTDDVYGGTY 102 (377)
T ss_pred CChHHHHHHH----HHHHHhCCCc---------eEEeCCHHHHHHHHH-HHhC-----------CCCEEEECCCccchHH
Confidence 4455555554 4778888653 467777876654332 2211 5778888888776433
Q ss_pred H----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 K----AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ~----aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
. .+...|+ +++.++. .|+++++++|+++++ +|+++.++|++|.+.|+++|+++|+++|++
T Consensus 103 ~~~~~~~~~~G~---~v~~v~~-------~d~~~l~~ai~~~tk------lV~le~P~NPtg~~~dl~~I~~la~~~g~~ 166 (377)
T PRK07671 103 RVMTKVLNRFGI---EHTFVDT-------SNLEEVEEAIRPNTK------AIYVETPTNPLLKITDIKKISTIAKEKGLL 166 (377)
T ss_pred HHHHHHHhcCCe---EEEEECC-------CCHHHHHHhcCCCCe------EEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence 2 3445687 8888763 388999999976543 888899999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
++||++|+......+ . . .++|.++.+++|++++|.+ .|+++++++....... ....+.
T Consensus 167 lvvD~a~~~~~~~~p-~-~-----~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~-~~~~~~------------ 226 (377)
T PRK07671 167 TIVDNTFMTPYWQSP-I-S-----LGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLH-FVQNST------------ 226 (377)
T ss_pred EEEECCCCccccCCh-h-h-----hCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHH-HHHHhh------------
Confidence 999999976443222 1 1 1789999999999998754 5666666654332211 111111
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
+-...+...|..++ |.+.+..++++..+++..+.+.|++.|++.-+
T Consensus 227 -----------g~~~~~~~a~l~~~--~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v 272 (377)
T PRK07671 227 -----------GGILGPQDSWLLLR--GLKTLGIRMEEHETNSRAIAEFLNNHPAVNKV 272 (377)
T ss_pred -----------cCCCCHHHHHHHHc--CcChHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 11124456666665 44567779999999999999999999988654
No 240
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.73 E-value=1.7e-17 Score=160.93 Aligned_cols=254 Identities=16% Similarity=0.128 Sum_probs=164.0
Q ss_pred hcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE
Q 037144 100 GFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY 179 (502)
Q Consensus 100 ~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~ 179 (502)
..|.....|...+.+.++|+. ++++||.+. .+|+++||+||..++.+... +...|+
T Consensus 17 ~a~~gd~~Yg~D~~~~~l~~~----i~~l~g~e~---------a~f~~sGT~An~~al~~~~~-----------~~~~vi 72 (290)
T PF01212_consen 17 AANVGDDAYGEDPTTARLEER----IAELFGKEA---------ALFVPSGTMANQLALRAHLR-----------PGESVI 72 (290)
T ss_dssp HTTSB-CCTTSSHHHHHHHHH----HHHHHTSSE---------EEEESSHHHHHHHHHHHHHH-----------TTEEEE
T ss_pred ccccCCcccCCChhHHHHHHH----HHHHcCCCE---------EEEeCCCChHHHHHHHHHHh-----------cCCcee
Confidence 344444468888877777755 678888874 57999999999999988874 678889
Q ss_pred eCCCCchhHHH--H-HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc-ccc---CCh
Q 037144 180 SSDQTHCAFQK--A-AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI-TAV---DPL 252 (502)
Q Consensus 180 ~s~~~H~s~~~--a-a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~-G~i---dpl 252 (502)
+...+|..+.. + ..+.|. +++.++.+. .|.+|+++|++.+.+......+|.+|.++.+++.. |.+ +.|
T Consensus 73 ~~~~aHi~~~E~ga~~~~~G~---~~~~l~~~~--~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el 147 (290)
T PF01212_consen 73 CADTAHIHFDETGAIEELSGA---KLIPLPSDD--DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEEL 147 (290)
T ss_dssp EETTEHHHHSSTTHHHHHTTC---EEEEEBECT--GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHH
T ss_pred ccccceeeeeccchhhHhcCc---EEEECCCcc--cCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHH
Confidence 99999987654 2 256788 899998763 27999999999998865433457788888777654 554 678
Q ss_pred hHHHHHHHHhCCEEEeeccccccccc--CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCccc
Q 037144 253 KPLCDVAKQFGIWVHVDAAYAGSACI--CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQY 330 (502)
Q Consensus 253 ~eI~~i~~~~g~~lhVDaA~g~~~~~--~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~y 330 (502)
++|.++|++||+.+|+|||.-+.... ....+... ..+|+++++++|.++.|. |.+++-++..+...+.. ..+
T Consensus 148 ~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~---~~~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~-~k~ 221 (290)
T PF01212_consen 148 RAISELAREHGLPLHMDGARLANAAAALGVSLAEIA---AGADSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQ-RKR 221 (290)
T ss_dssp HHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH---TTSSEEEEETTSTT-SSS--EEEEEESHHHHHHHHHH-HHH
T ss_pred HHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh---hhCCEEEEEEEccccccc--ceEEEechHHHHHHHHH-HHH
Confidence 88889999999999999986433221 11123333 489999999999999884 44444445433322211 112
Q ss_pred ccCccCCCCCcccccCCCcccccCCCCCCchHH---HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 037144 331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKL---WVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNF 407 (502)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~ 407 (502)
+.... |..+.+.+ +......+.+....+..+..+++++|.+.|+++ ++.+..++..
T Consensus 222 ~gg~~--------------------~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~-~~~~~~~~~t 280 (290)
T PF01212_consen 222 LGGGM--------------------RQAGVLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEAL-GGVLPRPVET 280 (290)
T ss_dssp HTHHH--------------------HHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEE-CEEEETTSS-
T ss_pred hccCe--------------------eecceeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCC
Confidence 21100 00011111 111111122333567788899999999999998 5666656554
Q ss_pred eE
Q 037144 408 SL 409 (502)
Q Consensus 408 ~~ 409 (502)
+.
T Consensus 281 n~ 282 (290)
T PF01212_consen 281 NQ 282 (290)
T ss_dssp HH
T ss_pred cE
Confidence 43
No 241
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.73 E-value=3.3e-15 Score=153.31 Aligned_cols=325 Identities=13% Similarity=0.079 Sum_probs=199.9
Q ss_pred HHHHHHHHhhcCC-CCcccccChhhHHHHHHHHHHHHHhcCC--CCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144 91 GIVGEMLSSGFNV-VGLDWISSPAAVELENIVMDWLGQMLDL--PKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK 167 (502)
Q Consensus 91 ~~~~~~l~~~~n~-~~~~~~~~p~~~~le~~~~~~l~~l~g~--~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~ 167 (502)
..+.+.+...+.. ....|....+..++.+.+.+|+.+..+. +.+. -.+++|+|+++|+..++.+.... .
T Consensus 47 ~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~-----i~v~iT~Ga~~al~~~~~~l~~~--~- 118 (396)
T PRK09257 47 RAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGR-----VATVQTPGGTGALRVGADFLKRA--F- 118 (396)
T ss_pred HHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCe-----EEEEecCCccHHHHHHHHHHHHh--C-
Confidence 5566666666543 2335777778889999999998765443 2210 02389999999988776543210 0
Q ss_pred hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
+++.|++.++++..+..+++..|+ +++.+|+...+++.+|+++|+++++.... +..+++.+.++|+||
T Consensus 119 ------pGd~Vlv~~P~y~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~~~~---~~~~~i~~~p~NPTG 186 (396)
T PRK09257 119 ------PDAKVWVSDPTWPNHRAIFEAAGL---EVKTYPYYDAATKGLDFDAMLADLSQAPA---GDVVLLHGCCHNPTG 186 (396)
T ss_pred ------CCCeEEECCCCcccHHHHHHHcCC---cEEEEeccccccCccCHHHHHHHHHhCCC---CCEEEEeCCCCCCCC
Confidence 678999999999999999999999 99999983222478999999998864211 124667788999999
Q ss_pred cc---CChhHHHHHHHHhCCEEEeecccccccccCc-cchhh--hcCCCCCCeeEEccCCcCCC-CCcceEEEe--eCch
Q 037144 248 AV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP-EFRHF--IDGVECVDSFSFNPHKWLFT-TLDCCCLWV--KDPS 318 (502)
Q Consensus 248 ~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~-~~~~~--~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~--r~~~ 318 (502)
.+ +.+++|+++|++||+|+++|.+|........ ..... +.+...--.++.++.|.++. ...+|++++ .++.
T Consensus 187 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~ 266 (396)
T PRK09257 187 ADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAE 266 (396)
T ss_pred CCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHH
Confidence 98 4577888999999999999999977543111 11111 11111111455779999986 688898874 3333
Q ss_pred hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--c------HHHHHHHHHHHHHHHHHHH
Q 037144 319 CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--G------VANLRNFIRSHVGMAKLFE 390 (502)
Q Consensus 319 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g------~~g~~~~~~~~~~la~~l~ 390 (502)
.+............... .+ ...+....+.+.+ + .+.+++..+++.++++.+.
T Consensus 267 ~~~~~~~~~~~~~~~~~-----------------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~ 326 (396)
T PRK09257 267 EADRVLSQLKATIRTNY-----------------SN---PPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLV 326 (396)
T ss_pred HHHHHHHHHHHHhhhhc-----------------CC---CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21111110000000000 00 0111222222222 1 2335566777888889999
Q ss_pred HHHhcCC---CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHH-HhcCcEEEEee
Q 037144 391 RLVTSDK---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESI-NVSGKVFMTHA 466 (502)
Q Consensus 391 ~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~ 466 (502)
+.|++.. ++.+. .|+.++++|.-.+ . ++.+++ .+.|. ++.+
T Consensus 327 ~~L~~~~~~~~~~~~-~p~gg~~~w~~l~----------------------------~----~~~~~l~~~~~V-~~~p- 371 (396)
T PRK09257 327 EALKAKGPSRDFDFI-ARQRGMFSYSGLT----------------------------P----EQVDRLREEFGV-YAVG- 371 (396)
T ss_pred HHHHhcCCCCCcccc-cccceEEEecCCC----------------------------H----HHHHHHHHcCCE-EEcC-
Confidence 9998862 35544 4556666553221 1 222333 34455 3333
Q ss_pred eECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 467 IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 467 ~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
.+ |+++++ .++++|+++++.|+++
T Consensus 372 --~~----ri~~~~--~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 372 --SG----RINVAG--LNESNIDYVAEAIAAV 395 (396)
T ss_pred --CC----eEEEee--CCHHHHHHHHHHHHhh
Confidence 12 999865 4667999999999865
No 242
>PRK05939 hypothetical protein; Provisional
Probab=99.73 E-value=1.5e-15 Score=154.76 Aligned_cols=239 Identities=11% Similarity=0.059 Sum_probs=154.1
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch---
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC--- 186 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~--- 186 (502)
..|....+|++ ++++.|... .+++++|+.|+..++.+... +++.|+++...|.
T Consensus 45 g~p~~~~lE~~----la~leg~~~---------~v~~ssG~~Ai~~~l~all~-----------~Gd~Vv~~~~~y~~t~ 100 (397)
T PRK05939 45 GTPTTAALEAK----ITKMEGGVG---------TVCFATGMAAIAAVFLTLLR-----------AGDHLVSSQFLFGNTN 100 (397)
T ss_pred CCHHHHHHHHH----HHHHhCCCe---------EEEeCCHHHHHHHHHHHHcC-----------CCCEEEECCCccccHH
Confidence 56777777766 567777653 46677778888766655432 6778888877654
Q ss_pred hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV 266 (502)
Q Consensus 187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l 266 (502)
++...+...|+ +++.++. .|+++|++++++++ .+|+++.++|++|.+.|+++|+++|+++|+++
T Consensus 101 ~~~~~l~~~G~---~v~~v~~-------~d~e~l~~~l~~~t------klV~vesp~NptG~v~dl~~I~~la~~~gi~l 164 (397)
T PRK05939 101 SLFGTLRGLGV---EVTMVDA-------TDVQNVAAAIRPNT------RMVFVETIANPGTQVADLAGIGALCRERGLLY 164 (397)
T ss_pred HHHHHHHhcCC---EEEEECC-------CCHHHHHHhCCCCC------eEEEEECCCCCCCCHHhHHHHHHHHHHcCCEE
Confidence 44456677888 8888875 27899999986544 37888999999999999999999999999999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCchh-hhhhhcCCcccccCccCCCCCcccc
Q 037144 267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPSC-LLSTLSTNPQYLKNEATDQEPKEQE 344 (502)
Q Consensus 267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~~-l~~~~~~~~~yl~~~~~~~~~~~~~ 344 (502)
+||++|+.+...-+. . -++|.+..++||+++++.. .|++++.+... ..........|....... ...
T Consensus 165 ivD~t~a~~~~~~~~--~-----~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 233 (397)
T PRK05939 165 VVDNTMTSPWLFRPK--D-----VGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQ----WGL 233 (397)
T ss_pred EEECCcccccccCcc--c-----cCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhh----HHH
Confidence 999999765432111 1 1799999999999987533 24444422210 000000000010000000 000
Q ss_pred cCCCc-ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 345 VGYKD-WQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 345 ~~~~~-~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
..... .....+-...+...|..++ |.+-+..+++++.+++..+.+.|++.|.++-
T Consensus 234 ~~~~~~~~~~~G~~~~p~~a~l~~r--gl~tl~~R~~~~~~na~~la~~L~~~p~V~~ 289 (397)
T PRK05939 234 TQIRKKGLRDMGATLSSEAAHRIAI--GAETLALRVDRSCSNALALAQFLEAHPKVAR 289 (397)
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccE
Confidence 00000 0001122234456665554 6788899999999999999999999998753
No 243
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.73 E-value=1.9e-15 Score=153.76 Aligned_cols=233 Identities=12% Similarity=0.100 Sum_probs=148.6
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G 196 (502)
+.+++.+++++.+|.+ ..++++|||.|+..++.+..-. +++.|+++..+|.+...++...|
T Consensus 32 ~~~~~e~~la~~~g~~---------~~v~~~sgt~al~~~l~~~~~~----------~Gd~Viv~~~t~~~~~~~~~~~G 92 (375)
T PRK11706 32 FTRRCQQWLEQRFGSA---------KVLLTPSCTAALEMAALLLDIQ----------PGDEVIMPSYTFVSTANAFVLRG 92 (375)
T ss_pred HHHHHHHHHHHHhCCC---------eEEEECCHHHHHHHHHHHhCCC----------CCCEEEECCCCcHHHHHHHHHcC
Confidence 3445556678888874 3789999999986665543111 67889999999999999999999
Q ss_pred CCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccc
Q 037144 197 IDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 276 (502)
Q Consensus 197 lg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~ 276 (502)
+ +++.++++++ ++.+|+++|++++++.+ .+|++++ .+|...++++|.++|+++|+++++|+||+.+.
T Consensus 93 ~---~~v~~d~d~~-~~~~d~~~le~~i~~~t------k~i~~~~---~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~ 159 (375)
T PRK11706 93 A---KIVFVDIRPD-TMNIDETLIEAAITPKT------RAIVPVH---YAGVACEMDTIMALAKKHNLFVVEDAAQGVMS 159 (375)
T ss_pred C---EEEEEecCCC-cCCcCHHHHHHhcCCCC------eEEEEeC---CCCCccCHHHHHHHHHHcCCEEEEECcccccc
Confidence 9 9999999864 47899999999986543 2555543 58999999999999999999999999997665
Q ss_pred ccCccchhhhcCCCCCCeeEEccC--CcCCCCCcceEEEeeCchhhhhh--hcC---CcccccCccCCCCCcccccCCCc
Q 037144 277 CICPEFRHFIDGVECVDSFSFNPH--KWLFTTLDCCCLWVKDPSCLLST--LST---NPQYLKNEATDQEPKEQEVGYKD 349 (502)
Q Consensus 277 ~~~~~~~~~~~~~~~aDsi~~~~h--K~l~~p~~~g~~~~r~~~~l~~~--~~~---~~~yl~~~~~~~~~~~~~~~~~~ 349 (502)
.... +. ... ..|.-++++| |.+.++ ..|++++.++...... +.. ........ ......
T Consensus 160 ~~~~--~~-~g~--~~~~~~~Sf~~~K~l~~g-~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---------~~~~~~ 224 (375)
T PRK11706 160 TYKG--RA-LGT--IGHIGCFSFHETKNYTAG-EGGALLINDPALIERAEIIREKGTNRSQFFRG---------QVDKYT 224 (375)
T ss_pred ccCC--ee-eec--CcCEEEEeCCCCcccccc-CCeEEEECCHHHHHHHHHHHHcCCCcchhhcc---------CCCcce
Confidence 3211 11 111 2465566666 988653 3455666655433211 110 00000000 000000
Q ss_pred ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144 350 WQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK 397 (502)
Q Consensus 350 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 397 (502)
+ ...+..+..-.+-+++-....+.+++..++..++++++.+.|..++
T Consensus 225 ~-~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~ 271 (375)
T PRK11706 225 W-VDIGSSYLPSELQAAYLWAQLEAADRINQRRLALWQRYYDALAPLA 271 (375)
T ss_pred e-eecccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 0 0111122211222233222235578888888999999999998876
No 244
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.72 E-value=1.8e-15 Score=153.59 Aligned_cols=219 Identities=16% Similarity=0.193 Sum_probs=150.8
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH-
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF- 188 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~- 188 (502)
..|....+|+. ++++.|.+. .+++++|+.|+..++ .+.. +++.|+++...|.+.
T Consensus 48 ~~p~~~~Le~~----la~l~g~~~---------al~~~SG~~Al~~~l-~~l~-----------pGd~Vi~~~~~y~~t~ 102 (380)
T PRK06176 48 GNPTRFALEEL----IADLEGGVK---------GFAFASGLAGIHAVF-SLFQ-----------SGDHVLLGDDVYGGTF 102 (380)
T ss_pred CChhHHHHHHH----HHHHhCCCC---------EEEECCHHHHHHHHH-HHcC-----------CCCEEEEcCCChhHHH
Confidence 45556666655 778887653 477788887775333 3321 677888888777543
Q ss_pred ---HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 189 ---QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 189 ---~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
...+...|+ +++.++. .|++++++++++++ .+|++..+++++|.+.|+++|+++|+++|++
T Consensus 103 ~~~~~~~~~~gi---~v~~vd~-------~d~e~l~~ai~~~t------~lV~lesP~Nptg~~~di~~I~~la~~~gi~ 166 (380)
T PRK06176 103 RLFDKVLVKNGL---SCTIIDT-------SDLSQIKKAIKPNT------KALYLETPSNPLLKITDLAQCASVAKDHGLL 166 (380)
T ss_pred HHHHHHHHhcCe---EEEEcCC-------CCHHHHHHhcCcCc------eEEEEECCCCCCceecCHHHHHHHHHHcCCE
Confidence 344566787 7777764 38999999887644 3788899999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
++||++|+......| .. .++|.++.++||++++|.. .|++..+++.... .+. .+...
T Consensus 167 vivD~t~a~~~~~~p-~~------~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~-~~~----~~~~~--------- 225 (380)
T PRK06176 167 TIVDNTFATPYYQNP-LL------LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQ-EIA----FFQNA--------- 225 (380)
T ss_pred EEEECCccccccCCc-cc------cCCCEEEecCceeccCCccceeeEEEecHHHHHH-HHH----HHHHH---------
Confidence 999999976543222 11 2799999999999988754 5556655544322 111 11000
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
.+....+...|..++ |.+.+..++++..+++..+.+.|++.|.++-+
T Consensus 226 ----------~G~~~~~~~~~l~~~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v 272 (380)
T PRK06176 226 ----------IGGVLGPQDSWLLQR--GIKTLGLRMEAHQKNALCVAEFLEKHPKVEKV 272 (380)
T ss_pred ----------hcCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence 011112344565554 55777888999999999999999999888654
No 245
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.72 E-value=1.9e-15 Score=145.52 Aligned_cols=323 Identities=14% Similarity=0.109 Sum_probs=222.1
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144 109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF 188 (502)
Q Consensus 109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (502)
....+...+.+++++.|.+.-|-+..+. ....++++|+|.+|-+-+.+..+ |++..+++.+.+..+
T Consensus 118 qdy~Gl~~frqa~A~Fm~~~r~~~v~fd---P~~~Vv~~G~T~ane~l~fcLad-----------pgdafLvPtPyY~gf 183 (471)
T KOG0256|consen 118 QDYHGLPSFRQAVAEFMERARGNRVKFD---PERVVVTNGATSANETLMFCLAD-----------PGDAFLVPTPYYPGF 183 (471)
T ss_pred ccccCchHHHHHHHHHHHHHhCCCCccC---ccceEEecccchhhHHHHHHhcC-----------CCceeeecCCCCCcc
Confidence 3445677889999999999888654431 12588999999988655444444 788899998888888
Q ss_pred HHHHH-HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCC
Q 037144 189 QKAAQ-IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGI 264 (502)
Q Consensus 189 ~~aa~-~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~ 264 (502)
.+-++ ..|+ +++.|.+....++++++++||+++.+..+.|.+..-|+++.|+|+.|.+-+ |..+.++|.++++
T Consensus 184 drdl~~rTgv---eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kni 260 (471)
T KOG0256|consen 184 DRDLRWRTGV---EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNI 260 (471)
T ss_pred cccceeccCc---eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcce
Confidence 87665 4588 999999987777999999999999999999999899999999999999854 6666777889999
Q ss_pred EEEeecccccccccCccchhhhc---CCC-CCC--eeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCccc-ccCccC
Q 037144 265 WVHVDAAYAGSACICPEFRHFID---GVE-CVD--SFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQY-LKNEAT 336 (502)
Q Consensus 265 ~lhVDaA~g~~~~~~~~~~~~~~---~~~-~aD--si~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~y-l~~~~~ 336 (502)
.+++|..|++..+..+++...+. ..+ ..| -|..+.+|=++.| ...|+++..+..... +.+....| +-
T Consensus 261 HvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~Vvs-aA~kmssf~~v---- 335 (471)
T KOG0256|consen 261 HVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVS-AATKMSSFGLV---- 335 (471)
T ss_pred EEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHH-HHHHHhhccCC----
Confidence 99999999998876655543322 111 233 4577899999877 456778777665543 22221111 11
Q ss_pred CCCCcccccCCCcccccCCCCCCchHHHHHHHHh-----cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEE
Q 037144 337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-----GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVC 411 (502)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~ 411 (502)
.+.-.+.....+ -++-+++...|....-+++.++|+++ |+.++ +...+++|
T Consensus 336 ----------------------Ss~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl-~s~AGlF~ 391 (471)
T KOG0256|consen 336 ----------------------SSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCL-KSNAGLFC 391 (471)
T ss_pred ----------------------cHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCcee-ecCCeeEE
Confidence 112222222222 23445666677777788899999998 88887 56678888
Q ss_pred EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE---CCEEEEEEEecCCCCcHHHH
Q 037144 412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV---GGIYVLRFAAGNSMTMESHV 488 (502)
Q Consensus 412 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lR~~~~~~~t~~~di 488 (502)
|.-...-++ ..+ .+. -.+|.+++...-++.++++.. ...+|+|+|+.| ..++.+
T Consensus 392 wvDlr~lL~--------------s~t--fe~-----El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn--~~~~t~ 448 (471)
T KOG0256|consen 392 WVDLRKLLT--------------SLT--FEG-----ELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFAN--MSEETL 448 (471)
T ss_pred EEEhHHhcC--------------cCC--hHH-----HHHHHHHHHHhhccccCCCCcceecCCCeEEEEecc--CCHHHH
Confidence 864322110 000 111 124556666554455666542 457899999976 466677
Q ss_pred HHHHHHHHHHHH
Q 037144 489 RAAWTVVQEHLE 500 (502)
Q Consensus 489 ~~~~~~l~~~~~ 500 (502)
+-+++.|+..+.
T Consensus 449 ~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 449 EVAMRRLKQFLD 460 (471)
T ss_pred HHHHHHHHHHHH
Confidence 778888887654
No 246
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.72 E-value=7.8e-15 Score=148.46 Aligned_cols=303 Identities=15% Similarity=0.090 Sum_probs=188.6
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC
Q 037144 93 VGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN 172 (502)
Q Consensus 93 ~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~ 172 (502)
+.+.+.+.+.. ...|. .++...+.+. +++.++++.+ ..++|+|+++++..++.+..+
T Consensus 48 ~~~~~~~~~~~-~~~Y~-~~~~~~lr~~----ia~~~~~~~~-------~I~it~G~~~al~~~~~~~~~---------- 104 (357)
T PRK14809 48 AVEAIREAAER-VHSYP-KASHADLTAA----LADRWDVSPE-------QVWLANGGDGALDYLARAMLD---------- 104 (357)
T ss_pred HHHHHHHHHhh-hhcCC-CCCHHHHHHH----HHHHhCCCcc-------eEEECCCHHHHHHHHHHHhcC----------
Confidence 33444443321 23343 2344455555 4555577654 688999999988666555433
Q ss_pred CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCCh
Q 037144 173 ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPL 252 (502)
Q Consensus 173 ~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl 252 (502)
+++.|++..+++..+...++..|. .++.+|++.++++.+|.+++++.+. . +.+|+++.++|+||.+-+.
T Consensus 105 -~gd~V~v~~P~y~~~~~~~~~~g~---~~~~~~l~~~~~~~~~~~~~~~~~~-~------~k~i~l~~p~NPTG~~~s~ 173 (357)
T PRK14809 105 -PGDTVLVPDPGFAYYGMSARYHHG---EVREYPVSKADDFEQTADTVLDAYD-G------ERIVYLTSPHNPTGSEIPL 173 (357)
T ss_pred -CCCEEEEeCCChHHHHHHHHHcCC---eEEEEecccCcCCCcCHHHHHHhhc-C------CcEEEEeCCCCCCCcCCCH
Confidence 677888888888777778888999 8999998754457788888777642 1 2367778999999999888
Q ss_pred hHHHHHHHHh--CCEEEeecccccccccCccchhhhcCCCCC-C-eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCC
Q 037144 253 KPLCDVAKQF--GIWVHVDAAYAGSACICPEFRHFIDGVECV-D-SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTN 327 (502)
Q Consensus 253 ~eI~~i~~~~--g~~lhVDaA~g~~~~~~~~~~~~~~~~~~a-D-si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~ 327 (502)
+++.++++.. ++++++|.+|+..... +.....+ +.. . .+..++.|.++ ....+|+++..+ ..+.......
T Consensus 174 ~~~~~l~~~~~~~~~iI~De~y~~~~~~-~~~~~~~---~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~-~~~~~~~~~~ 248 (357)
T PRK14809 174 DEVEALAERTDEETLVVVDEAYGEFAER-PSAVALV---EERDDVAVLRTFSKAYGLAGLRLGYAVVPE-EWADAYARVN 248 (357)
T ss_pred HHHHHHHHhCccCcEEEEechhhhccCC-chhHHHH---hhCCCEEEEecchhHhcCcchhheeeecCH-HHHHHHHHhC
Confidence 8887777654 7899999999765421 1111111 122 2 34457999997 556788887643 3322221111
Q ss_pred cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 037144 328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN 406 (502)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~ 406 (502)
..+ ....+..++++..+. .+.+++..+...+..+++.+.|... . + ++.
T Consensus 249 ~~~--------------------------~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-~---~-~~~ 297 (357)
T PRK14809 249 TPF--------------------------AASELACRAGLAALDDDEHVERTVETARWAREYIREELDAP-T---W-ESA 297 (357)
T ss_pred CCC--------------------------CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc-c---C-CCC
Confidence 000 012333444555443 3446666667777777777777543 1 2 445
Q ss_pred eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144 407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES 486 (502)
Q Consensus 407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~ 486 (502)
.+.+++++. . ..++.+.+.+.|..+..+..+....++|++++ +.+
T Consensus 298 g~f~~~~~~-~------------------------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~----~~~ 342 (357)
T PRK14809 298 GNFVLAEVG-D------------------------------ASAVAEAAQERGVIVRDCTSFGLPECIRITCG----TRE 342 (357)
T ss_pred CCEEEEECC-C------------------------------HHHHHHHHHHCCEEEEECccCCCCCeEEEecC----CHH
Confidence 555555442 1 13456666667875555544444568999975 356
Q ss_pred HHHHHHHHHHHHHH
Q 037144 487 HVRAAWTVVQEHLE 500 (502)
Q Consensus 487 di~~~~~~l~~~~~ 500 (502)
++++++++|+++.+
T Consensus 343 ~~~~~l~~L~~~l~ 356 (357)
T PRK14809 343 ETERAVEVLNEVLA 356 (357)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988764
No 247
>PRK06460 hypothetical protein; Provisional
Probab=99.72 E-value=1.9e-15 Score=153.40 Aligned_cols=220 Identities=15% Similarity=0.104 Sum_probs=144.3
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc---
Q 037144 109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH--- 185 (502)
Q Consensus 109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H--- 185 (502)
...|...++|+. +++++|.+. .+++++|++++..++.+... +++.|+++...+
T Consensus 42 ~~~p~~~~L~~~----lA~l~g~~~---------~v~~~sG~~ai~~~l~al~~-----------~Gd~Vl~~~~~~~~t 97 (376)
T PRK06460 42 EANPTVLELTKK----IVELENAEM---------GVAFSSGMGAISTTALALLK-----------PGNSVLVHRDMFGRS 97 (376)
T ss_pred CCCccHHHHHHH----HHHHhCCCc---------EEEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCCcCcH
Confidence 345555666554 778888753 35557777777665554422 566777765433
Q ss_pred -hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCC
Q 037144 186 -CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI 264 (502)
Q Consensus 186 -~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~ 264 (502)
..+...++..|+ +++.++.+. .+.+++.+++ ++.+|+++.++|++|.+-|+++|+++|+++|+
T Consensus 98 y~~~~~~~~~~G~---~v~~~~~~~-------~~~l~~~~~~------~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~ 161 (376)
T PRK06460 98 YRFFTDYLKNWGV---NVDASNPGS-------DNIIEKAKSK------RYDVVFVENITNPLLRVVDITELSKVCKENGS 161 (376)
T ss_pred HHHHHHHHHhhCc---EEEEECCCC-------HHHHHHhcCC------CceEEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence 345567788898 888887642 2334443322 23488899999999999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144 265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE 342 (502)
Q Consensus 265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 342 (502)
+++||++|+.+....+ .. .++|.++.++||+++++.+ .|++ +.++........... ....
T Consensus 162 ~vivDea~~~~~~~~~-l~------~~~divv~S~sK~l~G~~~~~~G~~-~~~~~l~~~l~~~~~-~~g~--------- 223 (376)
T PRK06460 162 ILIVDATFSTPINQKP-LE------LGADIVVHSASKFLAGHNDVIAGLA-AGYGKLLNVIDQMRR-TLGT--------- 223 (376)
T ss_pred EEEEECCcCccccCCh-hh------cCCCEEEeecceeccCCCCceEEEE-ecCHHHHHHHHHHHH-hcCC---------
Confidence 9999999975422111 11 1589999999999875432 4544 444443322111110 1100
Q ss_pred cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
...+...|.+++ |.+.+..++++..++++++.+.|++.|.++-+
T Consensus 224 --------------~~~~~~a~~~l~--~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v 267 (376)
T PRK06460 224 --------------SLDPHAAYLTLR--GIKTLKIRMDVINRNAEQIAEFLEGHPKVVKV 267 (376)
T ss_pred --------------CCCHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHcCCCccEE
Confidence 012344555555 56888999999999999999999999887543
No 248
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.72 E-value=2.4e-15 Score=152.48 Aligned_cols=237 Identities=11% Similarity=0.083 Sum_probs=146.2
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR 199 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~ 199 (502)
++.+++++.+|.+ ..++|+|||+|+..++.+..-. +++.|+++..+|.+...++...|+
T Consensus 35 ~~e~~la~~~g~~---------~~v~~~sgt~aL~~~l~al~~~----------pGd~Viv~~~t~~~~~~~~~~~G~-- 93 (376)
T TIGR02379 35 RCETWLENRTGTK---------KALLTPSCTAALEMAALLLDIQ----------PGDEVIMPSYTFVSTANAFVLRGA-- 93 (376)
T ss_pred HHHHHHHHHhCCC---------eEEEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCCcHHHHHHHHHcCC--
Confidence 3445577777764 4789999999987666543111 678899999999999999999999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccC
Q 037144 200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIC 279 (502)
Q Consensus 200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~ 279 (502)
+++.++++++ ++.+|+++|+++++++++ +|+. ++++|...|+++|.++|++||+++++|+||+.+....
T Consensus 94 -~~v~vd~d~~-~~~~d~~~le~~i~~~tk------~Iip---~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~ 162 (376)
T TIGR02379 94 -KIVFVDIRPD-TMNIDETLIESAITHRTK------AIVP---VHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYK 162 (376)
T ss_pred -EEEEEecCCC-cCCCCHHHHHHhcCcCce------EEEE---eCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccC
Confidence 9999999864 478999999999876433 5554 4468999999999999999999999999997654321
Q ss_pred ccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc-ccCCCCC
Q 037144 280 PEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ-ITLCRRF 358 (502)
Q Consensus 280 ~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~-~~~sr~~ 358 (502)
... ...+..+.++++.+.|.+......|++++.+++......... .+=...... ..... ..+. ...+.++
T Consensus 163 ~~~---~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~-~~g~~~~~~---~~~~~--~~~~~~~~g~n~ 233 (376)
T TIGR02379 163 GRA---LGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIR-EKGTNRSQF---FRGEV--DKYTWRDIGSSY 233 (376)
T ss_pred Ccc---cCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHH-HhCCCCccc---cccCC--CcceeeeecccC
Confidence 111 111112334444444556443356777777665433221100 000000000 00000 0000 0112222
Q ss_pred CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144 359 RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK 397 (502)
Q Consensus 359 ~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 397 (502)
+.-.+-+++-.-..+.+.++.++..+++++..+.|..++
T Consensus 234 ~~~~~~Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~~~ 272 (376)
T TIGR02379 234 LPSELQAAYLWAQLEQADRINQDRLATWQLYQDALKPLE 272 (376)
T ss_pred CccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCC
Confidence 221222222222346678888888999999999987764
No 249
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.72 E-value=1.3e-14 Score=150.73 Aligned_cols=332 Identities=14% Similarity=0.079 Sum_probs=217.9
Q ss_pred HHHHHHHHhhcC---CC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144 91 GIVGEMLSSGFN---VV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK 166 (502)
Q Consensus 91 ~~~~~~l~~~~n---~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~ 166 (502)
..+.+.+...+. .. ...|....+..++.+.+.+++....|..... ...++|+|+.+|+...+.+..+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~-----~~IiiT~G~q~al~l~~~~l~~---- 177 (459)
T COG1167 107 EALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEP-----EQIVITSGAQQALDLLLRLLLD---- 177 (459)
T ss_pred HHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCc-----CeEEEeCCHHHHHHHHHHHhCC----
Confidence 344555544442 22 3456666788999999999999888875432 2689999988887655544433
Q ss_pred HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144 167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246 (502)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~ 246 (502)
+++.|++.+++|+....+.+.+|+ +++.||+|++ .||+++||++++... .-++.+.....|+|
T Consensus 178 -------pGd~v~vE~PtY~~~~~~~~~~g~---~~~~vp~d~~---G~~~e~le~~~~~~~----~k~~y~~P~~qNPt 240 (459)
T COG1167 178 -------PGDTVLVEDPTYPGALQALEALGA---RVIPVPVDED---GIDPEALEEALAQWK----PKAVYVTPTFQNPT 240 (459)
T ss_pred -------CCCEEEEcCCCcHHHHHHHHHcCC---cEEecCCCCC---CCCHHHHHHHHhhcC----CcEEEECCCCCCCC
Confidence 789999999999999999999999 9999999853 699999999997641 11344444578899
Q ss_pred cccCCh---hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCC--CCeeEEccCCcCCCCCcceEEEeeCchhhh
Q 037144 247 TAVDPL---KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEC--VDSFSFNPHKWLFTTLDCCCLWVKDPSCLL 321 (502)
Q Consensus 247 G~idpl---~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~--aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~ 321 (502)
|..-++ ++|.++|++||+|++-|..|+-.....+.... +.++.. --....+++|.+.....+|++..... ...
T Consensus 241 G~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~-l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~-~~~ 318 (459)
T COG1167 241 GVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPP-LKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPE-LIE 318 (459)
T ss_pred CCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCC-hHhhCCCCCEEEEeeehhhcccccceeeeeCCHH-HHH
Confidence 998665 58999999999999999999776654322211 111112 22456679999998899999887543 221
Q ss_pred hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcC-CC
Q 037144 322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG--VANLRNFIRSHVGMAKLFERLVTSD-KR 398 (502)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~la~~l~~~l~~~-~~ 398 (502)
.+.......... +.......+..-+. .| ...++++.+.+.+..+.+.+.|.+. |+
T Consensus 319 -~~~~~k~~~~~~--------------------~s~~~Q~~la~~l~-~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~ 376 (459)
T COG1167 319 -KLLRLKQAADLG--------------------PSSLSQAALAAFLL-SGHYDRHLRRLRREYARRRDALLEALAEYLPE 376 (459)
T ss_pred -HHHHHHHHhcCC--------------------CChHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 111111111000 00011122222232 33 4456677777788888889999876 32
Q ss_pred eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE-eeeEC----CEEE
Q 037144 399 FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT-HAIVG----GIYV 473 (502)
Q Consensus 399 ~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~~----g~~~ 473 (502)
...+..|..+++.|.-.+... + ..++.++..++|..+.. +..+. ....
T Consensus 377 ~~~~~~p~gG~flwl~l~~~~-------------------------~--~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~ 429 (459)
T COG1167 377 LATWTRPEGGLFLWLELPEGI-------------------------D--ARELLAAALEKGVVVTPLGSAFSADGDPRNG 429 (459)
T ss_pred CeeeecCCceEEEEEEcCCCC-------------------------C--HHHHHHHHHHCCCEEEcCCccccCCCCCCCe
Confidence 333445666666554444321 1 34677777778886655 33232 2458
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 474 LRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 474 lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+|+++++. +++++++.+..|.++.++
T Consensus 430 ~Rl~~s~~--~~e~i~~gi~~l~~~~~~ 455 (459)
T COG1167 430 LRLSFSSP--SEEEIEEGIKRLAALLRE 455 (459)
T ss_pred EEEEcCCC--CHHHHHHHHHHHHHHHHH
Confidence 99999754 567999999988877654
No 250
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.72 E-value=2.4e-15 Score=143.90 Aligned_cols=298 Identities=14% Similarity=0.141 Sum_probs=204.3
Q ss_pred hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH
Q 037144 113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA 192 (502)
Q Consensus 113 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa 192 (502)
-...+|++ |++|.+-+. .++.+++-.||-..+...-.. +|+.+||..+..|.|+....
T Consensus 217 ~hv~LE~e----LA~LHqK~a---------ALlFsSCfVANDstLftLak~---------lpgcei~SD~gNHASMI~GI 274 (570)
T KOG1360|consen 217 HHVRLEAE----LADLHQKEA---------ALLFSSCFVANDSTLFTLAKK---------LPGCEIFSDEGNHASMIQGI 274 (570)
T ss_pred hhhhHHHH----HHHHhcCcc---------eeeeeeeeeccchHHHHHHHH---------CCCcEEeccccchHHHHHHh
Confidence 34556665 678876553 344455555665444443332 28889998888999999998
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
+-.++ .-..+.. -|+++|+++|+... ...|.+|......++.|++.||+||.|++++||+...+|..|
T Consensus 275 rns~v---~K~IFrH-------ND~~hL~~lL~~~~--~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVH 342 (570)
T KOG1360|consen 275 RNSRV---PKHIFRH-------NDLDHLEQLLQSSP--KSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVH 342 (570)
T ss_pred hhcCC---cceeecc-------CCHHHHHHHHHhCC--CCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhh
Confidence 88887 5555553 38999999998754 356889999999999999999999999999999999999998
Q ss_pred ccccccCccchhh--hcC-CCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhh-cCCcccccCccCCCCCcccccCCC
Q 037144 273 AGSACICPEFRHF--IDG-VECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTL-STNPQYLKNEATDQEPKEQEVGYK 348 (502)
Q Consensus 273 g~~~~~~~~~~~~--~~~-~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~ 348 (502)
+.+.+- |..... -+| +.++|.|+...-|.++.- |. |+.....+.+.+ +..+.|++.....
T Consensus 343 AVGlYG-~rGaGvgerdGvm~kvDiIsGTLgKafGcV---GG-YIAat~~LvDmiRSyAaGFIFTTSLP----------- 406 (570)
T KOG1360|consen 343 AVGLYG-PRGAGVGERDGVMHKVDIISGTLGKAFGCV---GG-YIAATRKLVDMIRSYAAGFIFTTSLP----------- 406 (570)
T ss_pred hhcccc-CCCCCccccCCcchhhhhcccchhhhcccc---cc-eehhhhhHHHHHHHhcCceEEecCCC-----------
Confidence 776542 211111 022 458999999999988643 22 232333333433 5566777654321
Q ss_pred cccccCCCCCCc-hHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhc
Q 037144 349 DWQITLCRRFRS-LKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTK 426 (502)
Q Consensus 349 ~~~~~~sr~~~a-l~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~ 426 (502)
..- ..+..+++.+ +.+|. .+.+.+.++.+++++.|.++ |+.++..| +.||.+++..
T Consensus 407 ---------P~vl~GAleaVr~lk~~eg~-~lR~~hqrnv~~~kq~l~~~-GiPVi~~p-SHIiPv~vgd---------- 464 (570)
T KOG1360|consen 407 ---------PMVLAGALEAVRILKSEEGR-VLRRQHQRNVKYVKQLLMEL-GIPVIPNP-SHIIPVRVGD---------- 464 (570)
T ss_pred ---------hHHHHhHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHHc-CCcccCCC-cceeeeeccC----------
Confidence 111 2334455555 34453 45566778889999999887 88887444 5677777754
Q ss_pred ccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE----eeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 427 YKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT----HAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~----~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..++.++.+.|..+..+++- |++..|...||+..+-.+ +.+-++.+++.+..+..+
T Consensus 465 ------------------a~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~H-T~~mm~~lv~~l~~vw~~ 524 (570)
T KOG1360|consen 465 ------------------AALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHH-TPQMMNILVNALLDVWNE 524 (570)
T ss_pred ------------------HHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCC-CHHHHHHHHHHHHHHHHH
Confidence 23467788888877666654 455578889999987555 566999999999887654
No 251
>PRK05839 hypothetical protein; Provisional
Probab=99.72 E-value=6.6e-15 Score=149.84 Aligned_cols=317 Identities=12% Similarity=0.057 Sum_probs=189.9
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHH-HHHHHh
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARD-RVLKKI 168 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~-~~~~~~ 168 (502)
+..+.+.+....+. ...|....+..++.+.+++|+++.+|.+-.. ...++|+|+++++...+.+... .
T Consensus 39 ~~~~~~a~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~-----~~I~it~G~~~al~~~~~~~~~~~----- 107 (374)
T PRK05839 39 PKFIQDALKNNAHL-LNKYPKSAGEESLREAQRGFFKRRFKIELKE-----NELIPTFGTREVLFNFPQFVLFDK----- 107 (374)
T ss_pred CHHHHHHHHHHhhc-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCc-----ceEEEecCcHHHHHHHHHHHhcCC-----
Confidence 34555555544332 3345544566789999999999998853211 2688999988887655444321 1
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|++..+++..+...++..|+ +++.+|.+.++.+.+|+++.+ +. . +.+|+++.++|+||.
T Consensus 108 -----~gd~vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~~~--~~-~------~k~v~i~nP~NPTG~ 170 (374)
T PRK05839 108 -----QNPTIAYPNPFYQIYEGAAIASRA---KVLLMPLTKENDFTPSLNEKE--LQ-E------VDLVILNSPNNPTGR 170 (374)
T ss_pred -----CCCEEEECCCCchhhHHHHHhcCC---EEEEeecccccCCcCCcchhh--hc-c------ccEEEEeCCCCCcCc
Confidence 467888888999999999999999 999999976555677765432 21 1 336777899999999
Q ss_pred cC---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhc-----CCCC-CC-eeEEccCCcC-CCCCcceEEEeeCc
Q 037144 249 VD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID-----GVEC-VD-SFSFNPHKWL-FTTLDCCCLWVKDP 317 (502)
Q Consensus 249 id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~-----~~~~-aD-si~~~~hK~l-~~p~~~g~~~~r~~ 317 (502)
+- .+++|+++|+++|+|+++|.+|+..... +....... +... -. .++.++.|.+ .....+|+++. ++
T Consensus 171 ~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~-~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~-~~ 248 (374)
T PRK05839 171 TLSLEELIEWVKLALKHDFILINDECYSEIYEN-TPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAG-DA 248 (374)
T ss_pred ccCHHHHHHHHHHHHHcCCEEEeccchhhcccC-CCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEec-CH
Confidence 84 4677788899999999999999764321 11111111 0001 12 4456799975 45677788776 33
Q ss_pred hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcC
Q 037144 318 SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSD 396 (502)
Q Consensus 318 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~ 396 (502)
.... .+.....++... . ..+...++...+ ..+.+++..++..++.+.+.+.|
T Consensus 249 ~~~~-~~~~~~~~~~~~--------------------~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l--- 301 (374)
T PRK05839 249 SILK-KYKAYRTYLGCA--------------------S---PLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL--- 301 (374)
T ss_pred HHHH-HHHHHHhhcCCC--------------------C---ChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc---
Confidence 3322 221111111100 0 111122222222 23445566666666666666554
Q ss_pred CCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC----CE
Q 037144 397 KRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG----GI 471 (502)
Q Consensus 397 ~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~----g~ 471 (502)
++. .++....+.+++.+ ..++.+++.+ .|..+.++..+. +.
T Consensus 302 -~~~--~p~gg~fi~~~~~~-------------------------------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~ 347 (374)
T PRK05839 302 -GIT--IPPATFYVWLPVDN-------------------------------DEEFTKKLYQNEGIKVLPGSFLGRNGIGK 347 (374)
T ss_pred -CCC--CCCeeEEEEEeCCC-------------------------------hHHHHHHHHHHCCEEEeCchhhCCCCCCC
Confidence 222 23333344444321 1245566654 676555433332 24
Q ss_pred EEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 472 YVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 472 ~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
.++|++++. +++++.++++.|.++.+
T Consensus 348 ~~iRis~~~---~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 348 GYVRIALVY---DTPKLEKALEIIKTYLE 373 (374)
T ss_pred CeEEEEecC---CHHHHHHHHHHHHHHhh
Confidence 799999962 47799999999988764
No 252
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.71 E-value=2e-15 Score=152.65 Aligned_cols=229 Identities=17% Similarity=0.127 Sum_probs=153.1
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|...++|+. ++++.+ . ..+++++|+.|+..++.+... +++.|+++...|+...
T Consensus 49 ~~p~~~~Le~~----lA~l~~--~--------~~v~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~y~~~~ 103 (366)
T PRK07582 49 SNPTWRALEAA----LGELEG--A--------EALVFPSGMAAITAVLRALLR-----------PGDTVVVPADGYYQVR 103 (366)
T ss_pred CCccHHHHHHH----HHHHcC--C--------CEEEECCHHHHHHHHHHHhcC-----------CCCEEEEeCCCcHhHH
Confidence 45566677766 455552 2 467888888887666554322 6778888888887665
Q ss_pred HHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 KAA----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ~aa----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
..+ ...|+ +++.++.++. + + .+.++ ..+|++..++|++|.+.|+++|+++|+++|++
T Consensus 104 ~~~~~~l~~~G~---~v~~v~~~~~--~----~----~~~~~------t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~ 164 (366)
T PRK07582 104 ALAREYLAPLGV---TVREAPTAGM--A----E----AALAG------ADLVLAETPSNPGLDVCDLAALAAAAHAAGAL 164 (366)
T ss_pred HHHHHHHhcCeE---EEEEECCCCh--H----H----HhccC------ceEEEEECCCCCCCCccCHHHHHHHHHHcCCE
Confidence 543 34688 8999987531 1 1 12222 23788889999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
++||++|+......| .. .++|.++.++|||+++|.+ .|+++.+++.... .+.....+...
T Consensus 165 lvVD~t~~~~~~~~p-~~------~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~-~l~~~~~~~g~---------- 226 (366)
T PRK07582 165 LVVDNTTATPLGQRP-LE------LGADLVVASDTKALTGHSDLLLGYVAGRDPELMA-AVERWRLLAGA---------- 226 (366)
T ss_pred EEEECCCCCccccCc-hh------cCCcEEEecccccccCCCCeeEEEEEcCcHHHHH-HHHHHHHHhCC----------
Confidence 999999864321111 11 1689999999999988766 4666665554322 22111111110
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec----C--C-----------C
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF----P--R-----------N 406 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~----~--~-----------~ 406 (502)
...++..|..++.+ +-+..++++..+++..+.+.|++.|.++-+. + | .
T Consensus 227 -------------~~~~~~a~l~~r~l--~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~ 291 (366)
T PRK07582 227 -------------IPGPFEAWLAHRSL--GTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRF 291 (366)
T ss_pred -------------CCCHHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCC
Confidence 11345566666544 5577888999999999999999999887543 1 2 3
Q ss_pred eeEEEEEee
Q 037144 407 FSLVCFRVT 415 (502)
Q Consensus 407 ~~~v~f~~~ 415 (502)
.++++|.+.
T Consensus 292 gg~~s~~~~ 300 (366)
T PRK07582 292 GGLVSFELA 300 (366)
T ss_pred cceEEEEeC
Confidence 568888874
No 253
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.71 E-value=1.5e-14 Score=148.45 Aligned_cols=293 Identities=13% Similarity=0.096 Sum_probs=171.8
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI 197 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl 197 (502)
..++.+.|+++.+.+ ..+++++||+||..|+..+|.......+....+..+|......|-+..-+..+.+-
T Consensus 84 ~~~l~~~l~~~~~~~---------~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~ 154 (396)
T PRK04073 84 LGPWYEKVAKLTGKD---------MVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSE 154 (396)
T ss_pred HHHHHHHHHhcCCCC---------eEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCC
Confidence 344556667776542 47899999999999999998753221111000233455555567665555554442
Q ss_pred CC---------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCC
Q 037144 198 DR---------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGI 264 (502)
Q Consensus 198 g~---------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~ 264 (502)
.. ..+..+|. -|+++|+++++++ +.+|+++...+++|.+-| +++|.++|++||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~------~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~ 221 (396)
T PRK04073 155 EEYKRGFGPMLPGIKKIPY-------GDLEALKAAITPN------TAAFLVEPIQGEAGINIPPEGFLKAARELCKEENV 221 (396)
T ss_pred cccccCCCCCCCCceEeCC-------CCHHHHHHhcccC------eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 10 01233332 1789999888643 347888888899999855 8999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
++++|.+|.++......+.....++ ..|.+++ .|.++.+ ...|+++.++ +.. +.+.... ..
T Consensus 222 lli~DEv~~g~g~~g~~~~~~~~~~-~pdi~~~--sK~lg~gg~~ig~~~~~~-~i~-~~~~~~~----~~--------- 283 (396)
T PRK04073 222 LFIADEIQTGLGRTGKLFACDWDNV-TPDMYIL--GKALGGGVFPISCVAANR-DIL-GVFTPGS----HG--------- 283 (396)
T ss_pred EEEEecchhCCCcCcHHHHhhhcCC-CCCEEEe--cccccCCCCcceEEEEcH-HHH-hhhcCCC----CC---------
Confidence 9999999986432111111011222 4677775 5998766 5678877653 222 2221100 00
Q ss_pred ccCCCcccccCCCCCCchHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC--CeEEecCCCeeEEEEEeecCc
Q 037144 344 EVGYKDWQITLCRRFRSLKLW---VVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK--RFEVAFPRNFSLVCFRVTPSA 418 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~--~~~l~~~~~~~~v~f~~~~~~ 418 (502)
.+. ++ ..+... ++|+.+..+ .+.++..+++++|.+.|+++. .+..+ ++...++.+.+...
T Consensus 284 ------~t~-~~---~~~~~aaa~aaL~~~~~~---~l~~~~~~~~~~l~~~L~~l~~~~i~~~-~~~g~~~~~~~~~~- 348 (396)
T PRK04073 284 ------STF-GG---NPLACAVSIAALEVLEEE---KLPERSLELGEYFKEQLKEIDNPMIKEV-RGRGLFIGVELNEP- 348 (396)
T ss_pred ------CCC-CC---CHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhcCCcccce-ecceEEEEEEecch-
Confidence 000 11 223333 334333222 355667788999999998762 22222 23344444444211
Q ss_pred chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
...+.++|.++|.++ .+ .+..++|++.. ...++++|++++++|+++
T Consensus 349 -----------------------------~~~~~~~l~~~Gv~~-~~---~~~~~iRi~p~-l~~t~e~i~~~~~~l~~~ 394 (396)
T PRK04073 349 -----------------------------ARPYCEALKEEGLLC-KE---THETVIRFAPP-LVITKEELDWAFEKIKAV 394 (396)
T ss_pred -----------------------------HHHHHHHHHHCCeEE-ec---CCCCEEEEECC-cccCHHHHHHHHHHHHHH
Confidence 235667777778653 32 13358999973 345777999999999876
Q ss_pred H
Q 037144 499 L 499 (502)
Q Consensus 499 ~ 499 (502)
.
T Consensus 395 l 395 (396)
T PRK04073 395 L 395 (396)
T ss_pred h
Confidence 4
No 254
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.71 E-value=6.4e-15 Score=151.95 Aligned_cols=253 Identities=11% Similarity=0.084 Sum_probs=157.2
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH
Q 037144 111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK 190 (502)
Q Consensus 111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 190 (502)
++...++|++ +++++|.+ ..++++|||+|+..++.+.......+.+. .+++.|+++..+|.+...
T Consensus 62 G~~~~~fe~~----lA~~~g~~---------~~v~~~sGt~al~~aL~al~~~~~~~~~~--~pGd~VIv~~~t~~a~~~ 126 (438)
T PRK15407 62 GRFNDAFEKK----LAEFLGVR---------YALLVNSGSSANLLAFSALTSPKLGDRAL--KPGDEVITVAAGFPTTVN 126 (438)
T ss_pred ChhHHHHHHH----HHHHhCCC---------eEEEECCHHHHHHHHHHHHhhccccccCC--CCCCEEEECCCCcHHHHH
Confidence 3445566655 56666664 36889999999998887654221111000 167889999999999999
Q ss_pred HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeec
Q 037144 191 AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDA 270 (502)
Q Consensus 191 aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDa 270 (502)
++...|+ .++.++++.. ++.+|+++++++++++++ +|++++ ..|...++++|.++|+++|+++++|+
T Consensus 127 ~v~~~G~---~pv~vdvd~~-~~~id~~~le~~i~~~tk------aVi~~~---~~G~p~dl~~I~~la~~~gi~vIeDa 193 (438)
T PRK15407 127 PIIQNGL---VPVFVDVELP-TYNIDASLLEAAVSPKTK------AIMIAH---TLGNPFDLAAVKAFCDKHNLWLIEDN 193 (438)
T ss_pred HHHHcCC---EEEEEecCCC-cCCcCHHHHHHHcCcCCe------EEEEeC---CCCChhhHHHHHHHHHHCCCEEEEEC
Confidence 9999999 9999998753 578999999999876443 566655 36777899999999999999999999
Q ss_pred ccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccC-------------ccCC
Q 037144 271 AYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKN-------------EATD 337 (502)
Q Consensus 271 A~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~-------------~~~~ 337 (502)
||+.+.......-. .+..+-++++.+.|.+.+.. .|+++++++....... ....+=.. ....
T Consensus 194 a~a~G~~~~g~~~G---~~gd~~~fSf~~~k~~~~ge-GG~l~t~d~~l~~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~ 268 (438)
T PRK15407 194 CDALGSTYDGRMTG---TFGDIATLSFYPAHHITMGE-GGAVFTNDPLLKKIIE-SFRDWGRDCWCAPGCDNTCGKRFGW 268 (438)
T ss_pred ccchhhhcCCeeee---ccCceEEEeCCCCCCccccC-ceEEEECCHHHHHHHH-HHHHhCccccccccccccccccccc
Confidence 99877654322111 11122244445556665543 4777777765432211 00000000 0000
Q ss_pred CCCccc-ccCCC-ccc-ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144 338 QEPKEQ-EVGYK-DWQ-ITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR 398 (502)
Q Consensus 338 ~~~~~~-~~~~~-~~~-~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~ 398 (502)
..+. ...+. .+. ...+-.++.-.+.+++-....+.+++++++..++++++.+.|..+++
T Consensus 269 --~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~ 330 (438)
T PRK15407 269 --QLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLED 330 (438)
T ss_pred --ccccccccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 0000 00000 000 01122223334444554445577889999999999999999998875
No 255
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.71 E-value=2.3e-15 Score=152.06 Aligned_cols=232 Identities=11% Similarity=0.132 Sum_probs=160.3
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|....+| +.++.+-|.+ ..+++++|+.|+..++.+... +++.|+++...|.++.
T Consensus 62 gnPt~~~Le----~~la~le~~~---------~~v~~sSG~aAi~~~l~all~-----------~GD~Vlv~~~~Y~~~~ 117 (395)
T PRK05967 62 GTPTTDALC----KAIDALEGSA---------GTILVPSGLAAVTVPFLGFLS-----------PGDHALIVDSVYYPTR 117 (395)
T ss_pred CChHHHHHH----HHHHHHhCCC---------CEEEECcHHHHHHHHHHHhcC-----------CCCEEEEccCCcHHHH
Confidence 344444444 4566665533 357777788888777655533 7888999988988765
Q ss_pred H----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 K----AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ~----aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
. .++..|+ ++..++.+ +.+.++++++++++ +|+++.++|+++.+.||++|+++|+++|++
T Consensus 118 ~l~~~~l~~~Gi---~v~~vd~~-------~~e~l~~al~~~Tk------lV~lesPsNP~l~v~dl~~I~~la~~~g~~ 181 (395)
T PRK05967 118 HFCDTMLKRLGV---EVEYYDPE-------IGAGIAKLMRPNTK------VVHTEAPGSNTFEMQDIPAIAEAAHRHGAI 181 (395)
T ss_pred HHHHHHHHhcCe---EEEEeCCC-------CHHHHHHhcCcCce------EEEEECCCCCCCcHHHHHHHHHHHHHhCCE
Confidence 4 4567788 88888642 35778888876543 899999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
++||++|+.....-| ... ++|.+..+..|++++..+ .|+ ++.++....... .+...
T Consensus 182 vvVD~t~a~p~~~~p-l~~------GaDivv~S~tKy~~Gh~d~~~G~-v~~~~~~~~~l~----~~~~~---------- 239 (395)
T PRK05967 182 VMMDNTWATPLYFRP-LDF------GVDISIHAATKYPSGHSDILLGT-VSANEKCWPQLL----EAHGT---------- 239 (395)
T ss_pred EEEECCccCceecCh-hHc------CCCEEEEecccccCCCCCeeEEE-EEcCHHHHHHHH----HHHHH----------
Confidence 999999977543322 221 899999999999754322 343 344443211111 00000
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cC-----C-----------C
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA-FP-----R-----------N 406 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~-~~-----~-----------~ 406 (502)
.+-...+..+|..++ |.+-+.-+++++.++|..+.+.|+++|.++-+ .| | .
T Consensus 240 ----------~G~~~~p~da~l~~r--gl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~ 307 (395)
T PRK05967 240 ----------LGLCAGPDDTYQILR--GLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGA 307 (395)
T ss_pred ----------cCCCCCHHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCC
Confidence 111224566776665 66888999999999999999999999988533 22 1 1
Q ss_pred eeEEEEEee
Q 037144 407 FSLVCFRVT 415 (502)
Q Consensus 407 ~~~v~f~~~ 415 (502)
.++++|.+.
T Consensus 308 gg~~sf~l~ 316 (395)
T PRK05967 308 SGIFSFVLA 316 (395)
T ss_pred ceEEEEEEc
Confidence 468888885
No 256
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.71 E-value=2.1e-14 Score=145.53 Aligned_cols=289 Identities=13% Similarity=0.053 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
.++.+. +++.++++.+ ..++|+|+++++...+.+. . +++.|++..+++..+...++.
T Consensus 60 ~~Lr~a----ia~~~~v~~~-------~I~it~G~~~~i~~~~~~l-~-----------~g~~vlv~~P~y~~~~~~~~~ 116 (360)
T PRK07392 60 RELRLA----LAQHHQLPPE-------WILPGNGAAELLTWAGREL-A-----------QLRAVYLITPAFGDYRRALRA 116 (360)
T ss_pred HHHHHH----HHHHhCcChh-------hEEECCCHHHHHHHHHHHh-C-----------CCCeEEEECCCcHHHHHHHHH
Confidence 445555 4455577654 6889999988876555432 1 344677888899999999999
Q ss_pred cCCCCCCEEEEecCCCCCc---ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecc
Q 037144 195 VGIDRKNIRAIKTTKSSSY---GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 271 (502)
Q Consensus 195 ~Glg~~~v~~v~~~~~~~~---~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA 271 (502)
+|+ +++.+|++.++.+ ..+++.+++... .+.+++++.++|+||.+-+.++|.++++++++ +++|.+
T Consensus 117 ~g~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~ 185 (360)
T PRK07392 117 FGA---TVKELPLPLDQPSPGLTLRLQTLPPQLT-------PNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEA 185 (360)
T ss_pred cCC---eEEEEecccccCCcccccCHHHHHHhcc-------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECc
Confidence 999 9999999754332 245555544321 23478888999999999999999999999985 677999
Q ss_pred cccccccCccchhhhcCCCCC-C-eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCC
Q 037144 272 YAGSACICPEFRHFIDGVECV-D-SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYK 348 (502)
Q Consensus 272 ~g~~~~~~~~~~~~~~~~~~a-D-si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 348 (502)
|..+.... ........+... . .+..++.|.++ ....+|+++.. ...+. .+......
T Consensus 186 y~~~~~~~-~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~-~~~~~-~~~~~~~~------------------ 244 (360)
T PRK07392 186 FMDFLPPD-AEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAH-PDRLQ-RWQQWRDP------------------ 244 (360)
T ss_pred hhhhccCc-cccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCC-HHHHH-HHHhhCCC------------------
Confidence 97664321 111111111122 2 44567999998 66778888764 33332 22111000
Q ss_pred cccccCCCCCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcc
Q 037144 349 DWQITLCRRFRSLKLWVVIRNFGV-ANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKY 427 (502)
Q Consensus 349 ~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~ 427 (502)
+ ....+..+++...+.. +..+...+...+.++++.+.|++++++.+. ++..+.+.++....
T Consensus 245 -~------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~fl~~~~~~~---------- 306 (360)
T PRK07392 245 -W------PVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPL-PSAANFLLVQSQGS---------- 306 (360)
T ss_pred -C------CCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCCEEEEEcCCC----------
Confidence 0 0123344444444432 333444556677788899999988888765 44444444333211
Q ss_pred cCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 428 KNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
..++.+++. +.|..+.++..+. +..++|++++. .++.+++.++|+++..
T Consensus 307 --------------------~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~----~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 307 --------------------ALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT----EAENQRLLEALAAILA 358 (360)
T ss_pred --------------------HHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC----HHHHHHHHHHHHHHhh
Confidence 235566654 4576555444443 34699999873 3356677777766543
No 257
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.71 E-value=5.2e-15 Score=153.83 Aligned_cols=365 Identities=12% Similarity=0.085 Sum_probs=202.6
Q ss_pred HHHHHHHHHHhhcCCCCcccccCh-hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHH-HHH
Q 037144 89 VAGIVGEMLSSGFNVVGLDWISSP-AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDR-VLK 166 (502)
Q Consensus 89 ~~~~~~~~l~~~~n~~~~~~~~~p-~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~-~~~ 166 (502)
++..+.++....++. .|.... .....|+.+.+++.+.++..... .+.-..++|+|+++|+..++.+.... ++.
T Consensus 108 ~~~~~~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~--~~~~~V~it~Gat~al~~~~~~l~~~~ll~ 182 (521)
T TIGR03801 108 PDAFLYEMCDGIIGD---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPP--PGEFDLFAVEGGTAAMCYIFDSLKANELLK 182 (521)
T ss_pred CCHHHHHHHHHhhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCC--CCcCeEEEeCCHHHHHHHHHHHHhHhhcCC
Confidence 445565555554433 354333 34456665557777765432110 00015889999999988776653211 111
Q ss_pred HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCC-----cccCHHHHHHHHHHHHhcCCccEEEEEec
Q 037144 167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSS-----YGLSAESVLSQINLDVEAELIPLFLCATV 241 (502)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~-----~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~ 241 (502)
+++.|++..+.+..+...+++.|.|. +++.|++++..+ |.+|+++|++++++.++ +|+++.
T Consensus 183 -------pGD~Vlv~~P~y~~y~~~~~l~~~g~-~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~k------ai~l~n 248 (521)
T TIGR03801 183 -------KGDKIALMTPIFTPYLEIPELPRYDF-EVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIK------ALFVVN 248 (521)
T ss_pred -------CCCEEEEeCCCcHHHHHHHHHhcCCc-EEEEeecccccccccccCCCCHHHHHHhcCCCCc------EEEEeC
Confidence 67889999999999988888875422 677777754322 88999999987755433 777889
Q ss_pred CCccccccCC---hhHHHHHHHHh--CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEee
Q 037144 242 GTTAITAVDP---LKPLCDVAKQF--GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVK 315 (502)
Q Consensus 242 gtt~~G~idp---l~eI~~i~~~~--g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r 315 (502)
++|+||.+-+ +++|+++|++| ++|+++|.+|+.+.. .+.........--.++.++.|.++ .....|+++..
T Consensus 249 P~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~ 325 (521)
T TIGR03801 249 PSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIALH 325 (521)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccchhhhCCCCEEEEEcchhhccCchhhhhhhhcC
Confidence 9999999955 77888889987 999999999986542 222222211112245667999986 55778888775
Q ss_pred CchhhhhhhcC---------Cccc--ccCccCCCCCcccccCCCcccccCCCC--------CCchHHH-----HHHHHh-
Q 037144 316 DPSCLLSTLST---------NPQY--LKNEATDQEPKEQEVGYKDWQITLCRR--------FRSLKLW-----VVIRNF- 370 (502)
Q Consensus 316 ~~~~l~~~~~~---------~~~y--l~~~~~~~~~~~~~~~~~~~~~~~sr~--------~~al~~~-----~~l~~~- 370 (502)
+...+...+.. ...| +... +....+.+.-...+|. ......+ ++...+
T Consensus 326 ~~~v~d~li~~lp~~~~~~l~~ry~~~~~~-------p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~ 398 (521)
T TIGR03801 326 KDNIFDKLIAELPEEKKKELDKRYSSLTTE-------PRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMD 398 (521)
T ss_pred chHHHHHHHHhccHHHHHHHhhhhccccCC-------hhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhc
Confidence 44221111100 0001 1000 0111111111111110 0111111 122222
Q ss_pred -cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhh--HH
Q 037144 371 -GVANLRNFIRSHVGMAKLFERLVTSDKRFEVA-FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERT--NE 446 (502)
Q Consensus 371 -g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 446 (502)
+.+...+..+.+.++.+.+.+.| |+.+. .++..+..+|.-.+.-... .....-...+ +.
T Consensus 399 ~~~~y~~~~~~~~~~R~~~l~~~L----g~~~~~~~~~g~~Y~~~di~~~~~~-------------~~~~~f~~~l~~~~ 461 (521)
T TIGR03801 399 KENAYKAETKDICRRREKLLFRGL----GLPLQEDPNDVAYYTLIDLEEWAEK-------------NYGEEFSSYLKKNY 461 (521)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhc----CCCCcCCCCCeEEEEEeehHHHHHH-------------hcchHHHHHHhccC
Confidence 34455666777777777777777 34332 3456566655433210000 0000000000 00
Q ss_pred HHHHHHHHHHhc-CcEEEEeeeECC-EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 447 FNRELLESINVS-GKVFMTHAIVGG-IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 447 ~~~~l~~~l~~~-g~~~~~~~~~~g-~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
...+++.+|.++ |.+++++..++. ..++|+|++| .+++++.++.+.|++++++
T Consensus 462 ~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~--l~~~~~~~~~~rl~~~~~~ 516 (521)
T TIGR03801 462 SPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLAN--LNEYDYAEIGRAIRKILDE 516 (521)
T ss_pred CHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHH
Confidence 123556666554 665566555543 4579999976 4667899999999988765
No 258
>PRK04311 selenocysteine synthase; Provisional
Probab=99.70 E-value=1.8e-14 Score=148.53 Aligned_cols=193 Identities=15% Similarity=0.100 Sum_probs=128.5
Q ss_pred CCHHHHHHHHHHhhcCCCC---cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHH
Q 037144 87 SSVAGIVGEMLSSGFNVVG---LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDR 163 (502)
Q Consensus 87 ~~~~~~~~~~l~~~~n~~~---~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~ 163 (502)
+..+..+.+.+...+..+. ..+..+.....+ ..+.+.+++++|.+. .+++++|+.|+..++.+. .
T Consensus 96 s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~-~~~e~~lA~l~Gae~---------a~vv~sgtaAl~l~l~~l-~- 163 (464)
T PRK04311 96 ALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRD-RALAALLCALTGAED---------ALVVNNNAAAVLLALNAL-A- 163 (464)
T ss_pred CCCCHHHHHHHHHHHhcccccccchhhcccchHH-HHHHHHHHHHhCCCe---------EEEECCHHHHHHHHHHHh-C-
Confidence 3444555566555543332 112222223333 356778899999763 577888888887766432 1
Q ss_pred HHHHhCccCCCCeEEEeCCCCchh------HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEE
Q 037144 164 VLKKIGRENISKLVVYSSDQTHCA------FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFL 237 (502)
Q Consensus 164 ~~~~~~~~~~~~~~v~~s~~~H~s------~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~V 237 (502)
+++.|++|...|++ +...++..|+ +++.++++. ..++++++++|+++++ +|
T Consensus 164 ----------~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~---~l~~v~~~~----~t~~~dle~aI~~~Tk------lV 220 (464)
T PRK04311 164 ----------AGKEVIVSRGELVEIGGAFRIPDVMRQAGA---RLVEVGTTN----RTHLRDYEQAINENTA------LL 220 (464)
T ss_pred ----------CCCEEEEcchhhhhcCcchhhHHHHHHCCc---EEEEECCCC----CCCHHHHHHhcCccCe------EE
Confidence 56788888766652 3345677898 999888642 4689999999987654 77
Q ss_pred EEecCCcc--cc--ccCChhHHHHHHHHhCCEEEeeccccccc----c---cCccchhhhcCCCCCCeeEEccCCcCCCC
Q 037144 238 CATVGTTA--IT--AVDPLKPLCDVAKQFGIWVHVDAAYAGSA----C---ICPEFRHFIDGVECVDSFSFNPHKWLFTT 306 (502)
Q Consensus 238 v~t~gtt~--~G--~idpl~eI~~i~~~~g~~lhVDaA~g~~~----~---~~~~~~~~~~~~~~aDsi~~~~hK~l~~p 306 (502)
+.++.+|+ +| ..-|+++|+++|++||++++||++.|... + ..|.....+. .++|.+++++|||+++|
T Consensus 221 ~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~--~GaDiv~fSg~K~LgGp 298 (464)
T PRK04311 221 LKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLA--AGVDLVTFSGDKLLGGP 298 (464)
T ss_pred EEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHh--cCCcEEEecCcccccCC
Confidence 77777775 45 56799999999999999999999654321 1 0111111111 28999999999999988
Q ss_pred CcceEEEeeCc
Q 037144 307 LDCCCLWVKDP 317 (502)
Q Consensus 307 ~~~g~~~~r~~ 317 (502)
. +|+++.++.
T Consensus 299 ~-~G~i~g~~~ 308 (464)
T PRK04311 299 Q-AGIIVGKKE 308 (464)
T ss_pred c-eEEEEEcHH
Confidence 4 788877643
No 259
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.70 E-value=2.9e-14 Score=146.14 Aligned_cols=301 Identities=13% Similarity=0.045 Sum_probs=177.3
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI 197 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl 197 (502)
..++.+.|+++++.+ ..+|++||++||..|+..+|.....+.+ . .+..+|......|-+..-+....|.
T Consensus 79 ~~~la~~L~~~~~~~---------~~~f~~SGseA~e~Alk~ar~~~~~~~~-~-~r~~ii~~~~~yHG~~~~~~~~~~~ 147 (397)
T TIGR03246 79 VLRLAKKLVDATFAD---------KVFFCNSGAEANEAALKLARRYALDKHG-A-DKSEIVAFKNSFHGRTLFTVSVGGQ 147 (397)
T ss_pred HHHHHHHHHhhCCCC---------EEEEeCCcHHHHHHHHHHHHHHHHhcCC-C-CCCEEEEECCCcCCccHHHHHhcCC
Confidence 344556677776542 4799999999999999999875322211 0 1344555566667766555454432
Q ss_pred C---------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc----CChhHHHHHHHHhCC
Q 037144 198 D---------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV----DPLKPLCDVAKQFGI 264 (502)
Q Consensus 198 g---------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i----dpl~eI~~i~~~~g~ 264 (502)
. ...+..+|. -|+++|++++.+. +.+|++....++.|.+ +.+++|.++|++||+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~ 214 (397)
T TIGR03246 148 PKYSQGFAPLPGGIKHAPY-------NDLAAAKALISDK------TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNA 214 (397)
T ss_pred cccccCCCCCCCceEEeCC-------CCHHHHHHHhccC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 0 012333332 2789999988643 3467777666666744 459999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144 265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE 344 (502)
Q Consensus 265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 344 (502)
++++|.+|.|......-+.....++ ..|.+++ .|.++..+..|+++.++. +.+.+.... ..
T Consensus 215 llI~DEv~tG~Gr~G~~~a~~~~gv-~pDi~t~--~K~lggG~pigav~~~~~--i~~~~~~~~----~~---------- 275 (397)
T TIGR03246 215 LLIFDEVQTGVGRTGELYAYMHYGV-TPDILTS--AKALGGGFPIGAMLTTTE--IAAHLKVGT----HG---------- 275 (397)
T ss_pred EEEEechhhcCCccccchhhhhcCC-CCCEEEe--ehhhhCCcceeEEEEcHH--HHHhccCCC----cC----------
Confidence 9999999865522111111111233 5787765 698876677888877543 223332110 00
Q ss_pred cCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEec--CCCeeEEEEEeecCcchh
Q 037144 345 VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAF--PRNFSLVCFRVTPSAVMD 421 (502)
Q Consensus 345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~--~~~~~~v~f~~~~~~~~~ 421 (502)
.++ ++.+.......+++..+.. .++.++..++.++|++.|+++. .+.++. .....++.+.+.+..
T Consensus 276 -----~t~-~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~--- 343 (397)
T TIGR03246 276 -----TTY-GGNPLACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAY--- 343 (397)
T ss_pred -----CCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCch---
Confidence 011 1111122333344444322 4567888889999999887752 122221 112233344332210
Q ss_pred hhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 422 KLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
......+.+.+.++|.+.... +..++|++.. ...+++||++++++|.++.++
T Consensus 344 -----------------------~~~~~~~~~~l~~~Gv~~~~~----g~~~lR~~p~-~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 344 -----------------------QGKAKQFVNAAAEEGVIALIA----GPNVVRFAPS-LVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred -----------------------hhHHHHHHHHHHHCCeEEeec----CCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHH
Confidence 123457778888889764332 3468999864 445777999999999987764
No 260
>PRK08637 hypothetical protein; Provisional
Probab=99.70 E-value=2.2e-14 Score=146.79 Aligned_cols=333 Identities=9% Similarity=0.032 Sum_probs=192.7
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcC-CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLD-LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g-~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
..+.+.+..........|....+..++.+.+.+++.+..+ ..... ....++|+|+++++.+.+.+..+
T Consensus 23 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~----~~~I~it~G~~~al~~~~~~l~~------- 91 (388)
T PRK08637 23 SSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKK----MSLPIVTNALTHGLSLVADLFVD------- 91 (388)
T ss_pred HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccc----cceeeEccchHHHHHHHHHHhcC-------
Confidence 3344444433233345566656677788887777776543 22110 01468999999988766655433
Q ss_pred ccCCCCeEEEeCCCCchhHHHHH-HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAA-QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa-~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|++..+++..+...+ ...|. +++.+|+..+ ++.+|+++|+++++..... ...+++.+.++|+||.
T Consensus 92 ----~gd~Vlv~~P~y~~~~~~~~~~~g~---~vv~v~~~~~-~~~~d~~~l~~~~~~~~~~--~~~~~~~~~P~NPTG~ 161 (388)
T PRK08637 92 ----QGDTVLLPDHNWGNYKLTFNTRRGA---EIVTYPIFDE-DGGFDTDALKEALQAAYNK--GKVIVILNFPNNPTGY 161 (388)
T ss_pred ----CCCEEEEcCCCCccHHHHHHHhcCC---EEEEecccCC-CCcCCHHHHHHHHHhhccC--CCEEEEEeCCCCCCCC
Confidence 6778889989998888764 46898 9999998422 3478999999988722111 1246777779999998
Q ss_pred c---CChhHHHHHHHH-----hCCEEEeecccccccccCccchhh---hcCC-CCCCeeE-EccCCcC-CCCCcceEEEe
Q 037144 249 V---DPLKPLCDVAKQ-----FGIWVHVDAAYAGSACICPEFRHF---IDGV-ECVDSFS-FNPHKWL-FTTLDCCCLWV 314 (502)
Q Consensus 249 i---dpl~eI~~i~~~-----~g~~lhVDaA~g~~~~~~~~~~~~---~~~~-~~aDsi~-~~~hK~l-~~p~~~g~~~~ 314 (502)
+ +.+++|+++|++ |++++++|.+|....+........ +... ++.-++. .++.|.+ .....+|++++
T Consensus 162 ~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~ 241 (388)
T PRK08637 162 TPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITF 241 (388)
T ss_pred CCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEE
Confidence 8 456777777775 899999999997765422111111 1111 1222233 2788965 45567898886
Q ss_pred eC-----chhhhhhhcCCc-ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHH----HHHHHHHH
Q 037144 315 KD-----PSCLLSTLSTNP-QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLR----NFIRSHVG 384 (502)
Q Consensus 315 r~-----~~~l~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~----~~~~~~~~ 384 (502)
.. +... +.+.... .+..... . ....+...++...+....+. +......+
T Consensus 242 ~~~~~~~~~l~-~~~~~~~~~~~~~~~-----------------~---~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 300 (388)
T PRK08637 242 GTKAGSSQTVK-EALEKKVKGLIRSNI-----------------S---NGPHPSQSAVLRALNSPEFDKEKQEKFQILKE 300 (388)
T ss_pred ccccCCcHHHH-HHHHHHHHHHhhccc-----------------C---CCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 53 3322 2221100 0000000 0 01223333444444332332 23334455
Q ss_pred HHHHHHHHHhcC---CCeEEecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cC
Q 037144 385 MAKLFERLVTSD---KRFEVAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SG 459 (502)
Q Consensus 385 la~~l~~~l~~~---~~~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g 459 (502)
..+.+.+.|++. +++.+. +|..+++.| ++. . . ...++.+++.+ .|
T Consensus 301 r~~~~~~~l~~~~~~~~~~~~-~~~~g~~~~~~l~-~-~---------------------------~~~~l~~~l~~~~g 350 (388)
T PRK08637 301 RYEKTKEVLYDGKYDDAWQAY-PFNSGYFMCLKLK-G-V---------------------------DAEELRVHLLEKYG 350 (388)
T ss_pred HHHHHHHHHHhhCCCCCcccc-cccceEEEEecCC-h-H---------------------------HHHHHHHHHhhhcc
Confidence 555666666554 246654 455555554 332 1 0 13466777754 46
Q ss_pred cEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 460 KVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 460 ~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..+.. .+..++|++++. .++++++.+++.|.++.+.
T Consensus 351 v~~~~----~~~~~iRi~~~~--~~~~~i~~~~~~l~~~~~~ 386 (388)
T PRK08637 351 IGTIA----LNETDLRIAFSC--VEEEDIPELFDSIYKAIKD 386 (388)
T ss_pred eEEEe----ccCCceEEEeec--CCHHHHHHHHHHHHHHHHh
Confidence 54332 245689999975 3567999999999888765
No 261
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.69 E-value=4.1e-14 Score=145.47 Aligned_cols=304 Identities=11% Similarity=0.072 Sum_probs=174.5
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G 196 (502)
....+.+.+++++|.+ ..+|++|||+||..|+..++.......+....+..+|......|-+...+....+
T Consensus 74 ~~~~~~~~l~~~~~~~---------~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~ 144 (400)
T PTZ00125 74 VLGLAEKYITDLFGYD---------KVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSAST 144 (400)
T ss_pred HHHHHHHHHHhCCCCC---------EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcC
Confidence 4445556677777653 4789999999999999998864222111111134455666666766655555443
Q ss_pred CCC---------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhC
Q 037144 197 IDR---------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFG 263 (502)
Q Consensus 197 lg~---------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g 263 (502)
-.. ..+..++ ..|+++|+++++. ..+.+|++....+++|.+-| +++|.++|++||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~-------~~d~~~le~~l~~-----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~ 212 (400)
T PTZ00125 145 DPKCYNNFGPFVPGFELVD-------YNDVEALEKLLQD-----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYN 212 (400)
T ss_pred CcchhccCCCCCCCceEeC-------CCCHHHHHHHhCC-----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 200 0112222 2389999998851 12457777777889999877 999999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144 264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE 342 (502)
Q Consensus 264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 342 (502)
+++++|.+|.+.......+.....++ ..|.++++ |+++.++ +.|+++.++. .. +.+.... ...
T Consensus 213 ~lli~Dev~~g~g~~G~~~~~~~~~~-~pd~~~~s--K~l~~g~~~ig~v~~~~~-~~-~~~~~~~--~~~--------- 276 (400)
T PTZ00125 213 VLLIVDEIQTGLGRTGKLLAHDHEGV-KPDIVLLG--KALSGGLYPISAVLANDD-VM-LVIKPGE--HGS--------- 276 (400)
T ss_pred CEEEEeccccCCCccchhhHHHhcCC-CCCEEEEc--ccccCCCcCcEEEEEcHH-HH-hhccCCC--CCC---------
Confidence 99999999965322111111111223 46877765 9998765 7888877543 22 2221110 000
Q ss_pred cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeEEEEEeecCc
Q 037144 343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFPRNFSLVCFRVTPSA 418 (502)
Q Consensus 343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~~~~~~v~f~~~~~~ 418 (502)
+. .+.+........+++.+..+++ .++..++.+++++.|+++ +.+..+ .+...++.+.+.+..
T Consensus 277 --------t~-~~~~~~~~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~~~~v~~~~~~ 343 (400)
T PTZ00125 277 --------TY-GGNPLACAVAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPWVKEI-RGKGLLNAIVFDHSD 343 (400)
T ss_pred --------CC-CcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCCeEEE-ecccEEEEEEEccCc
Confidence 00 1111122223334444433333 345556677777777653 222222 233334444443211
Q ss_pred chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
......+.+++.++|.. +.+. +..++|++.+ ...++++|+++++.|.++
T Consensus 344 --------------------------~~~~~~~~~~l~~~Gv~-v~~~---~~~~lRi~~~-~~~~~~~i~~~l~~l~~~ 392 (400)
T PTZ00125 344 --------------------------GVNAWDLCLKLKENGLL-AKPT---HDNIIRFAPP-LVITKEQLDQALEIIKKV 392 (400)
T ss_pred --------------------------chHHHHHHHHHHHCCeE-Eeec---CCCEEEEECC-ccCCHHHHHHHHHHHHHH
Confidence 01134567777777864 4332 3468999975 345777999999999987
Q ss_pred HHh
Q 037144 499 LEA 501 (502)
Q Consensus 499 ~~~ 501 (502)
+++
T Consensus 393 l~~ 395 (400)
T PTZ00125 393 LKS 395 (400)
T ss_pred HHH
Confidence 764
No 262
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.69 E-value=4.5e-14 Score=137.45 Aligned_cols=375 Identities=14% Similarity=0.101 Sum_probs=228.7
Q ss_pred chhHhhcCCCCC--CCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHH-HHHHh-----hcCCCCcccc
Q 037144 38 PGYLKKRLPESA--PYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVG-EMLSS-----GFNVVGLDWI 109 (502)
Q Consensus 38 ~~~l~~~~~~~~--p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~l~~-----~~n~~~~~~~ 109 (502)
|..++.. ...+ +..+.+..+++.++.+....|. ..+.|.|--.-+...|+++- .++.. .+-+++..-+
T Consensus 40 P~~Ir~~-~~~~~~~~~~~sE~e~l~~l~~ia~kN~---~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEIS 115 (450)
T COG0403 40 PPSIRKK-LDTLLPLPKPLSEYEALAELKEIASKNK---VFTSFIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEIS 115 (450)
T ss_pred CHHHHhc-ccccCCCCCCCCHHHHHHHHHHHHhcCc---hhhhhccCcccCCcCcHHHHHHhhcCccccccCCCCchhhh
Confidence 5555543 2222 2235699999999999876665 45677775544555666665 44432 1234443344
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
++..-.-+|-+ ..+++|.|++-. +..+--++|.+- .|+..++... +.++-.++++...|+...
T Consensus 116 QGrLqaLfefQ--tlv~dLTGm~VA-------NASm~DeaTAaA-EAm~ma~r~~-------k~k~~~~~V~~~vhpqt~ 178 (450)
T COG0403 116 QGRLEALFEFQ--TLVADLTGLDVA-------NASMLDEATAAA-EAMLMAKRVT-------KKKRNKFLVPKDVHPQTL 178 (450)
T ss_pred hHHHHHHHHHH--HHHHHHhCCCcc-------cchhhhhHHHHH-HHHHHHHHhh-------cCcCceEEecCCCCHHHH
Confidence 55555556655 779999999864 234444555333 3333332211 013567899999998766
Q ss_pred HHHH----HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 KAAQ----IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ~aa~----~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
...+ -+|+ +++.++.+ |.++|+++ ++.. .+.|++..+++.-+.+.++.+|.+.+|++|..
T Consensus 179 ~Vl~Tra~~~g~---~i~~~~~~-------d~~~l~~~-~~~~-----~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al 242 (450)
T COG0403 179 DVLRTRAEGLGI---EIEVVDAD-------DLDDLESA-DDGD-----VFGVLVQYPNTFGIVEEDLRALIEAAHSAGAL 242 (450)
T ss_pred HHHHhhcccCce---EEEEeccc-------hhhhhhhc-cccC-----eEEEEEecCCCCCccchhHHHHHHHHhhcCCE
Confidence 5543 3445 66666543 77888887 3211 35788888874444778899999999999998
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC----CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF----TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK 341 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~----~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 341 (502)
+.|=+=--+..++-|.... +||.++.+.+-++. +.+.+|++.+|++. ....|..+-+...+ .
T Consensus 243 ~~v~aDplaL~LL~pPGe~------GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~-----~R~mPGRlVG~S~D---~ 308 (450)
T COG0403 243 VIVAADPLALGLLKPPGEF------GADIVVGSAQRFGVPMGFGGPHAGYFAVKDEF-----KRQMPGRLVGVSVD---A 308 (450)
T ss_pred EEEEechhHhhccCCcccc------CCceEEecCcccCCCcCCCCcceeeeeEhHhH-----hhcCCCceeeeeec---C
Confidence 7764311111222222222 89999999998641 22348888887653 23456665544333 2
Q ss_pred ccccCCCcccccC----CCCCCc----------hHHHHH--HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecC
Q 037144 342 EQEVGYKDWQITL----CRRFRS----------LKLWVV--IRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAFP 404 (502)
Q Consensus 342 ~~~~~~~~~~~~~----sr~~~a----------l~~~~~--l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~~ 404 (502)
.+...+. +++|. -||..| +++.++ +-++|.+|+.++.++.++++.+|.++|++.. |++++..
T Consensus 309 ~G~~A~r-LaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~ 387 (450)
T COG0403 309 AGKRAFR-LALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD 387 (450)
T ss_pred CCCchhh-hhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc
Confidence 2332222 23332 344333 222222 3346999999999999999999999999653 6898877
Q ss_pred CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCc
Q 037144 405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTM 484 (502)
Q Consensus 405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~ 484 (502)
..+..++++... +.+..+.++....|.-. ..+.. ..+=+|+. -.++
T Consensus 388 ~fFdt~~v~~~~-----------------------------~~~~~l~~~~~~~G~~L---~~~~~-~~~~ia~t-Et~t 433 (450)
T COG0403 388 HFFDTFTVRVPE-----------------------------EVAEALLAAAIAGGINL---RRVDA-DTVLIALT-ETTT 433 (450)
T ss_pred cceeeEEEecch-----------------------------hHHHHHHHHHHhcCCce---eeecC-CceEEEee-cccC
Confidence 777788887742 22456666665666421 11111 14566765 4466
Q ss_pred HHHHHHHHHHHHHH
Q 037144 485 ESHVRAAWTVVQEH 498 (502)
Q Consensus 485 ~~di~~~~~~l~~~ 498 (502)
++||+.+++.+...
T Consensus 434 ~~~i~~l~~~~~~~ 447 (450)
T COG0403 434 KEDIDALVAAFGGV 447 (450)
T ss_pred HHHHHHHHHHHhhh
Confidence 77999999988764
No 263
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.69 E-value=8.8e-15 Score=150.59 Aligned_cols=239 Identities=13% Similarity=0.129 Sum_probs=154.9
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-- 187 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-- 187 (502)
..|...++| +.+++++|.+ ..+++++|+.|+..++.+... +++.|+++...|..
T Consensus 55 ~~p~~~~le----~~lA~l~g~~---------~~v~~~sG~~Ai~~al~~l~~-----------~Gd~Vl~~~~~y~~t~ 110 (418)
T TIGR01326 55 MNPTTDVLE----QRIAALEGGV---------AALAVASGQAAITYAILNLAQ-----------AGDNIVSSSYLYGGTY 110 (418)
T ss_pred CChhHHHHH----HHHHHHhCCC---------eEEEEccHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHH
Confidence 444444444 5578888864 368999999999888776543 56677777776643
Q ss_pred --HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 188 --FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 188 --~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
+...+...|+ +++.++.+ |+++|++++++++ .+|++..++|++|.+.|+++|+++|+++|++
T Consensus 111 ~~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~l~~~t------~~V~le~p~NPtg~v~dl~~I~~la~~~~i~ 174 (418)
T TIGR01326 111 NLFKHTLKRLGI---EVRFVDPD-------DPEEFEKAIDENT------KAVFAETIGNPAINVPDIEAIAEVAHAHGVP 174 (418)
T ss_pred HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhcCcCC------eEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 3455677898 88888742 7899999886543 3788889999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE 344 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 344 (502)
++||++|+.+....+ .. .++|.++.+++|+++++ ...|.+++....... ..... ..+...... +...
T Consensus 175 livD~t~~~~~~~~~-l~------~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~-~~~~~-~~~~~~~~~---q~a~ 242 (418)
T TIGR01326 175 LIVDNTFATPYLCRP-ID------HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDW-ANGRF-PLFTTPDPS---YHGL 242 (418)
T ss_pred EEEECCCchhhcCCc-hh------cCCeEEEECccccccCCccceEEEEEecccccc-ccccc-ccccCCCCc---cccc
Confidence 999999976533222 11 26899999999999864 336666665432111 00000 000000000 0000
Q ss_pred -cCC-----------C-cccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 345 -VGY-----------K-DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 345 -~~~-----------~-~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
... . .+.-..+-...+...|..++ |.+.+..++++..+++..+.+.|.+.|++..+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~--~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V 311 (418)
T TIGR01326 243 VFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQ--GLETLSLRMERHVENALKVAEFLEAHPKVAWV 311 (418)
T ss_pred hhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHC--CcccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 000 0 00000111223445565544 55677788888889999999999999998755
No 264
>PRK07505 hypothetical protein; Provisional
Probab=99.69 E-value=2.5e-14 Score=147.01 Aligned_cols=300 Identities=9% Similarity=0.056 Sum_probs=170.2
Q ss_pred hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144 114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ 193 (502)
Q Consensus 114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~ 193 (502)
..+...++.+.+++++|. . .+++++|++|+..++..++..... +.++.+|+.+...|.|+.....
T Consensus 89 ~~~~~~~l~~~la~~~~~-~---------~~~~~sG~~a~~~ai~~~~~~~~~-----~~~~~vi~~~~~~H~s~~~~~~ 153 (402)
T PRK07505 89 RSQILKDLEEALSELFGA-S---------VLTFTSCSAAHLGILPLLASGHLT-----GGVPPHMVFDKNAHASLNILKG 153 (402)
T ss_pred hhHHHHHHHHHHHHHhCC-C---------EEEECChHHHHHHHHHHHHhcccC-----CCCCCEEEEchhhhHhHHhhhh
Confidence 355666788889999886 2 355567788998888766532111 0133466777788988753222
Q ss_pred --HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecc
Q 037144 194 --IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 271 (502)
Q Consensus 194 --~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA 271 (502)
..+. +++.+|. .|+++|++++++.+ .+++++.+.+++|.+.|+++|.++|++||+++++|++
T Consensus 154 ~~~~~~---~v~~~~~-------~d~~~l~~~~~~~~------~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa 217 (402)
T PRK07505 154 ICADET---EVETIDH-------NDLDALEDICKTNK------TVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDA 217 (402)
T ss_pred hhhcCC---eEEEeCC-------CCHHHHHHHHhcCC------CEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECc
Confidence 2333 7777775 38899999886432 3677778889999999999999999999999999999
Q ss_pred cccccc-c-Cccch-hhhcC-CCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccC
Q 037144 272 YAGSAC-I-CPEFR-HFIDG-VECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVG 346 (502)
Q Consensus 272 ~g~~~~-~-~~~~~-~~~~~-~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~ 346 (502)
|+...+ . ...+. ..+.. ......++.++.|.++.+ .|++++.++... +.+.. ...|.+
T Consensus 218 ~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~-~~~~~~~~~~t~-------------- 280 (402)
T PRK07505 218 HGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS--GGVIMLGDAEQI-ELILRYAGPLAF-------------- 280 (402)
T ss_pred ccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc--CeEEEeCCHHHH-HHHHHhCCCcee--------------
Confidence 843211 1 11111 11111 123345566889998755 355554454433 22221 112211
Q ss_pred CCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhh
Q 037144 347 YKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRT 425 (502)
Q Consensus 347 ~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~ 425 (502)
..+.. .....+.+++..+..+.+.++.++..++.+.+...+... .....+.+..+.. +.
T Consensus 281 ------~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~g~~~~i~~~~~-~~-------- 340 (402)
T PRK07505 281 ------SQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE-----QSGSFLPIRLIYI-GD-------- 340 (402)
T ss_pred ------CCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----CCCCCCCEEEEEe-CC--------
Confidence 11111 122233344444444455555444444444443322111 0111122222222 11
Q ss_pred cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee---ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI---VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.....++.++|.++|.++..... ..+..+||+++. ...++++++++++.|+++.++
T Consensus 341 -------------------~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~-~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 341 -------------------EDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFR-ASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred -------------------HHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecC-ccCCHHHHHHHHHHHHHHHHh
Confidence 11235678888888976443211 113368999986 445667999999999987653
No 265
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=9.8e-15 Score=149.11 Aligned_cols=242 Identities=13% Similarity=0.130 Sum_probs=161.0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
.+|....+|+. ++++.|.. .++.++||+.|+.+++.+... +++.|+++...|.+..
T Consensus 59 ~nPtv~~lE~~----la~leg~~---------~av~~~SG~aAi~~al~all~-----------~GD~VI~~~~~Y~~T~ 114 (432)
T PRK06702 59 GNPTLAAFEQK----LAELEGGV---------GAVATASGQAAIMLAVLNICS-----------SGDHLLCSSTVYGGTF 114 (432)
T ss_pred CCcHHHHHHHH----HHHHhCCC---------cEEEECCHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHH
Confidence 46777777766 56776654 368899999999888876532 6788999998886544
Q ss_pred HH----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 KA----AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ~a----a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
.. +..+|+ +++.+.. .+|+++|+++|+++++ +|++..++++++.+-|+++|+++|+++|++
T Consensus 115 ~~~~~~l~~~Gi---~v~~vd~------~~d~~~l~~~I~~~Tk------~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~ 179 (432)
T PRK06702 115 NLFGVSLRKLGI---DVTFFNP------NLTADEIVALANDKTK------LVYAESLGNPAMNVLNFKEFSDAAKELEVP 179 (432)
T ss_pred HHHHHHHHHCCC---EEEEECC------CCCHHHHHHhCCcCCe------EEEEEcCCCccccccCHHHHHHHHHHcCCE
Confidence 44 577888 8888843 4799999999987654 777888999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCch--hhh----hhhcCCcccccCccCCC
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPS--CLL----STLSTNPQYLKNEATDQ 338 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~--~l~----~~~~~~~~yl~~~~~~~ 338 (502)
+++|.+++...+.-| ... +||.++-+..||+++..+ .|.+.+.... +.. ........+.......
T Consensus 180 livD~T~~tP~~~~p-l~~------GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~- 251 (432)
T PRK06702 180 FIVDNTLATPYLCQA-FEH------GANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQ- 251 (432)
T ss_pred EEEECCCCchhhCCh-hhc------CCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhh-
Confidence 999999965433222 222 899999999999976533 3333332111 000 0000000000000000
Q ss_pred CCcccccC-----CCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 339 EPKEQEVG-----YKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 339 ~~~~~~~~-----~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
..+... ...+....+-...++..|..++. .+.+..++++..+++..+.+.|++.|.++-+
T Consensus 252 --~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rg--L~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V 316 (432)
T PRK06702 252 --NFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIG--LETLHLRMERHSENALAVAKWLADHERIEWV 316 (432)
T ss_pred --ccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHHHhCCCcceE
Confidence 000000 00001112224456777777764 4678899999999999999999999988754
No 266
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.68 E-value=6.6e-15 Score=148.72 Aligned_cols=232 Identities=15% Similarity=0.160 Sum_probs=157.4
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc--
Q 037144 108 WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH-- 185 (502)
Q Consensus 108 ~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H-- 185 (502)
...+|...++|+. ++++.|.+ ..+.+++|+.|+..++.+... +++.|+++...+
T Consensus 60 r~~~P~~~~lE~~----la~leg~~---------~av~~sSG~aAi~~al~all~-----------~GD~Vl~~~~~yg~ 115 (384)
T PRK06434 60 RWGNPTVQAFEEK----YAVLENAE---------HALSFSSGMGAITSAILSLIK-----------KGKRILSISDLYGQ 115 (384)
T ss_pred CCCChhHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCccch
Confidence 3467777888877 66777764 368888889888777765422 677788775532
Q ss_pred -h-hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC
Q 037144 186 -C-AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG 263 (502)
Q Consensus 186 -~-s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g 263 (502)
+ .+...+...|+ +++.+++++.+++.+++ . .+.+|....++|+++.+.|+++|+++|++++
T Consensus 116 t~~~~~~~~~~~Gi---~v~fvd~~~~~~~~l~~---------~-----~tklv~~e~~snpt~~v~Di~~I~~la~~~~ 178 (384)
T PRK06434 116 TFYFFNKVLKTLGI---HVDYIDTDRLNSLDFDP---------S-----NYDLIYAESITNPTLKVPDIKNVSSFCHEND 178 (384)
T ss_pred HHHHHHHHHHhcCc---EEEEECCCChhheeecC---------C-----CeeEEEEEcCCCCCceeecHHHHHHHHHHcC
Confidence 2 23356777899 99999986423233222 1 1347888999999999999999999999998
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144 264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK 341 (502)
Q Consensus 264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 341 (502)
++||++++.....-| .. .++|.+++|+||+++++.+ .|+++++++........ +...
T Consensus 179 --lvVD~t~~s~~~~~p-l~------~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~----~~~~-------- 237 (384)
T PRK06434 179 --VIVDATFASPYNQNP-LD------LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVE----RRKT-------- 237 (384)
T ss_pred --eEEECCCCCcccCCc-hh------cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHH----HHHh--------
Confidence 567999866543222 21 2799999999999988765 56665655543221110 0000
Q ss_pred ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------CeeEE
Q 037144 342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-----------NFSLV 410 (502)
Q Consensus 342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-----------~~~~v 410 (502)
.+.....+.+|..++ |.+.+..++++..+++..+.+.|+++|.++-+.-| ..+++
T Consensus 238 ------------~G~~~~~~~A~l~~~--gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~ 303 (384)
T PRK06434 238 ------------LGSNPDPIQAYLALR--GLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGML 303 (384)
T ss_pred ------------cCCCCCHHHHHHHHh--CCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceE
Confidence 011124455565554 56788999999999999999999999988643222 24578
Q ss_pred EEEee
Q 037144 411 CFRVT 415 (502)
Q Consensus 411 ~f~~~ 415 (502)
+|.+.
T Consensus 304 sf~l~ 308 (384)
T PRK06434 304 SFELR 308 (384)
T ss_pred EEEEC
Confidence 88874
No 267
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.68 E-value=3.9e-14 Score=145.61 Aligned_cols=163 Identities=15% Similarity=0.116 Sum_probs=115.5
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch------hHHHH
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC------AFQKA 191 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~------s~~~a 191 (502)
...+.+.+++++|.+. .+++++|+.|+..++.+ .. +++.|++|+..|. ++...
T Consensus 124 ~~~le~~lA~l~gae~---------alvv~sg~aAi~l~l~~-l~-----------~GdeVIvs~~e~v~~ggs~~i~~~ 182 (454)
T TIGR00474 124 YSHVEGLLCELTGAED---------ALVVNNNAAAVLLALNT-LA-----------KGKEVIVSRGELVEIGGSFRIPDV 182 (454)
T ss_pred HHHHHHHHHHHhCCCc---------EEEECCHHHHHHHHHHH-hC-----------CcCEEEECCChhhhhcchhhHHHH
Confidence 3457788999999864 46677888888766633 21 5678888876652 34456
Q ss_pred HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc--cc--ccCChhHHHHHHHHhCCEEE
Q 037144 192 AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA--IT--AVDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 192 a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~--~G--~idpl~eI~~i~~~~g~~lh 267 (502)
++..|+ +++.++++. ..|+++++++|+++++ +|+.++.+|. .| .+-|+++|+++|++||++++
T Consensus 183 ~~~~G~---~~~~v~~~~----~~~l~dle~aI~~~T~------lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vi 249 (454)
T TIGR00474 183 MEQSGA---KLVEVGTTN----RTHLKDYEDAITENTA------LLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVM 249 (454)
T ss_pred HHHcCC---EEEEeCCCC----CCCHHHHHHhcCcCCE------EEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEE
Confidence 677898 899887642 4689999999977654 6777777765 46 47899999999999999999
Q ss_pred eeccccccc----c---cCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc
Q 037144 268 VDAAYAGSA----C---ICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP 317 (502)
Q Consensus 268 VDaA~g~~~----~---~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~ 317 (502)
||++.|... + ..|...... -.++|.+++++|||+++|. +|+++.++.
T Consensus 250 vD~~sG~l~~~~~~gl~~~p~~~~~~--~~GaDiv~fSg~K~LgGp~-~G~i~g~~~ 303 (454)
T TIGR00474 250 EDLGSGSLVDLSRYGLPDEPTVQEVI--AAGVDLVTFSGDKLLGGPQ-AGIIVGKKE 303 (454)
T ss_pred EECCCcccccchhccCCCCcccccHh--HcCCCEEEecCccccCCCe-EEEEEECHH
Confidence 998643320 0 011111111 1279999999999999884 788877643
No 268
>PLN02397 aspartate transaminase
Probab=99.68 E-value=4.9e-14 Score=145.52 Aligned_cols=323 Identities=11% Similarity=0.056 Sum_probs=194.4
Q ss_pred HHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcE--EEcCCc--hHHHHHHHHHHHHHHHH
Q 037144 92 IVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGG--VIQGTT--CEALLCTLTAARDRVLK 166 (502)
Q Consensus 92 ~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g--~~t~gg--t~a~~~al~~a~~~~~~ 166 (502)
.+.+.+...++.+ ...|....+..++.+.+.+|+.+..+.+... ... .-+.+| +.+++.++....+
T Consensus 70 ~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~-----~~i~~~~i~~g~Ga~~l~~~~~~~~~---- 140 (423)
T PLN02397 70 VVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKE-----NRVATVQCLSGTGSLRLGAEFLARFY---- 140 (423)
T ss_pred HHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhc-----CeeEeeecccchHHHHHHHHHHHHhC----
Confidence 3444443333333 3368888888999999999986553322100 011 112233 3334333333222
Q ss_pred HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144 167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246 (502)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~ 246 (502)
+++.|+++++++..+...++..|+ +++.+|+...+++.+|++.+++.+.+.. .+..+++.+.++|+|
T Consensus 141 -------pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~v~l~~~~~~~~d~~~l~~~l~~~~---~~~~~i~~~~P~NPT 207 (423)
T PLN02397 141 -------PGSTIYIPNPTWGNHHNIFRDAGV---PVRTYRYYDPKTRGLDFDGLLEDLKAAP---DGSFVLLHACAHNPT 207 (423)
T ss_pred -------CCCEEEEeCCCchhHHHHHHHcCC---eEEEeecccCcCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCC
Confidence 678899999999999999999999 9999998422247899999998886431 124678888899999
Q ss_pred ccc---CChhHHHHHHHHhCCEEEeecccccccccCc--cchhh--hcCCCCCCee-EEccCCcCC-CCCcceEEE--ee
Q 037144 247 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHF--IDGVECVDSF-SFNPHKWLF-TTLDCCCLW--VK 315 (502)
Q Consensus 247 G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~--~~~~~--~~~~~~aDsi-~~~~hK~l~-~p~~~g~~~--~r 315 (502)
|.+ +.+++|+++|++||+|+++|.+|........ ..... +... .-.+| ..++.|.++ ....+|+++ ..
T Consensus 208 G~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~-~~~vI~~~SfSK~~~~~G~RvG~~v~~~~ 286 (423)
T PLN02397 208 GVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVED-GHEILVAQSYAKNMGLYGERVGALSVVCK 286 (423)
T ss_pred CCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhc-CCcEEEEEECcccCCCccccceEEEEEeC
Confidence 999 4577888999999999999999987654210 01111 1111 11244 457999998 467788875 33
Q ss_pred CchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-----H---HHHHHHHHHHHHHH
Q 037144 316 DPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV-----A---NLRNFIRSHVGMAK 387 (502)
Q Consensus 316 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~---g~~~~~~~~~~la~ 387 (502)
++..+.........+..... .+ ...+..+++...+.. + .+++..++..++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~-----------------~~---~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~ 346 (423)
T PLN02397 287 SADVAVRVKSQLKLIARPMY-----------------SN---PPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQ 346 (423)
T ss_pred CHHHHHHHHHHHHHHHhccc-----------------CC---CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33322111100000000000 00 012233333333321 2 25677788899999
Q ss_pred HHHHHHhcCCC----eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE
Q 037144 388 LFERLVTSDKR----FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM 463 (502)
Q Consensus 388 ~l~~~l~~~~~----~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 463 (502)
.+.+.|+++ + ++++ .|+.++++|.-.+ . +++++|.++..+++
T Consensus 347 ~l~~~L~~~-~~~~~~~~~-~p~gg~fl~~~l~----------------------------~----~~~~~Ll~~~~V~v 392 (423)
T PLN02397 347 KLYDALEAR-GSPGDWSHI-TKQIGMFSFTGLN----------------------------K----EQVDRMTKEYHIYM 392 (423)
T ss_pred HHHHHHHhc-CCCCCCCcc-cCCceEEEecCCC----------------------------H----HHHHHHHHhCCEEE
Confidence 999999987 5 6654 4666776664221 1 24555555444444
Q ss_pred EeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 464 THAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 464 ~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
.+ ++ |+++++ .++++|++++++|+++.+
T Consensus 393 ~~---~~----Ri~~~~--~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 393 TR---DG----RISMAG--LSSKNVPYLADAIHAVVT 420 (423)
T ss_pred CC---CC----eEEEee--CCHHHHHHHHHHHHHHHh
Confidence 32 22 999865 466799999999998764
No 269
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.67 E-value=7.2e-14 Score=140.15 Aligned_cols=283 Identities=11% Similarity=0.075 Sum_probs=174.6
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144 106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH 185 (502)
Q Consensus 106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (502)
..|. .++...+++. +++.+|++.+ ..++|+|+++++...+.+. +++.|+++.+.|
T Consensus 50 ~~Y~-~~g~~~lr~~----ia~~~~~~~~-------~I~~t~G~~~~l~~~~~~~-------------~gd~V~v~~P~y 104 (337)
T PRK03967 50 NRYP-HITSDPLREA----IAEFYGLDAE-------NIAVGNGSDELISYLVKLF-------------EGKHIVITPPTF 104 (337)
T ss_pred ccCC-CCCHHHHHHH----HHHHhCcCcc-------eEEEcCCHHHHHHHHHHHh-------------CCCeEEEeCCCh
Confidence 3453 2344555554 5555566554 5889999998875433211 356788888888
Q ss_pred hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 186 ~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
..+..+++..|+ +++.++++. ++.+|++.|++++. .+ .+|+++.++|+||.+-+.++|.++++ ++++
T Consensus 105 ~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~-~~------~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ 171 (337)
T PRK03967 105 GMYSFYAKLNGI---PVIDVPLKE--DFTIDGERIAEKAK-NA------SAVFICSPNNPTGNLQPEEEILKVLE-TGKP 171 (337)
T ss_pred HHHHHHHHHcCC---eEEEeecCC--CCCcCHHHHHHhcc-CC------CEEEEeCCCCCCCCCCCHHHHHHHHh-cCCE
Confidence 888888899999 999999874 47899999987642 12 25667899999999999999999995 7999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE 344 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 344 (502)
+++|.+|..+.- ..........++ -.+..++.|.++ ....+|+++.. +.... .+......
T Consensus 172 ii~De~y~~~~~--~~~~~~~~~~~~-vi~l~S~SK~~~l~GlRiG~iv~~-~~~i~-~~~~~~~~-------------- 232 (337)
T PRK03967 172 VVLDEAYAEFSG--KSLIGLIDEYPN-LILLRTFSKAFGLAGIRAGYAIAN-EEIID-ALYRIKPP-------------- 232 (337)
T ss_pred EEEECchhhhcc--cchHHHHhhCCC-EEEEecchHhhcchhhhheeeecC-HHHHH-HHHhhcCC--------------
Confidence 999999976431 111111111111 144567999998 55677888763 33322 22111100
Q ss_pred cCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhh
Q 037144 345 VGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKL 423 (502)
Q Consensus 345 ~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~ 423 (502)
++ ..++...++...+ ..+.+.+.+++..+.++.+.+.|.+. ..++..+.+++.+
T Consensus 233 -----~~------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~~~~~~~~--------- 287 (337)
T PRK03967 233 -----FS------LNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY-----AYPSDANFLLLKL--------- 287 (337)
T ss_pred -----CC------CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC-----cCCCCCcEEEEhH---------
Confidence 00 0223333333333 23455555666667777787777654 1233333333211
Q ss_pred hhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 424 RTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.+.+.+.++|..+... ......++|++++ +.++.++++++|+++.+.
T Consensus 288 --------------------------~~~~~l~~~gi~v~~~-~~~~~~~~Ri~~~----~~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 288 --------------------------DAYDYLLENGIVVRKL-SGRLEGHIRVTVG----KREENDEFIKALKEIKEG 334 (337)
T ss_pred --------------------------HHHHHHHHCCEEEEeC-CCCCCCeEEEecC----CHHHHHHHHHHHHHHHHh
Confidence 1456666778544332 2233568999986 445888999998887654
No 270
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.67 E-value=1.1e-13 Score=139.40 Aligned_cols=320 Identities=13% Similarity=0.120 Sum_probs=190.6
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144 106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH 185 (502)
Q Consensus 106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (502)
..|..+|...++|+. +++++|++. ++.|++||.|......+... ++++| +...|
T Consensus 65 e~yag~~s~~~lE~~----va~~~G~~~---------av~v~sGT~Al~ll~~l~l~-----------pGDeV--psn~~ 118 (450)
T TIGR02618 65 EAYAGSRNFYHLERT----VRELYGFKY---------VVPTHQGRGAENLLSQIAIK-----------PGDYV--PGNMY 118 (450)
T ss_pred hhhcCCCcHHHHHHH----HHHHHCCCe---------EEEcCCHHHHHHHHHHhCCC-----------CcCEE--CCcee
Confidence 358899999999987 567778763 78999999995543211111 56665 55788
Q ss_pred hhHHHH-HHHcCCCCCCEEEEecCC--------CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc-ccc---CCh
Q 037144 186 CAFQKA-AQIVGIDRKNIRAIKTTK--------SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI-TAV---DPL 252 (502)
Q Consensus 186 ~s~~~a-a~~~Glg~~~v~~v~~~~--------~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~-G~i---dpl 252 (502)
++-.++ +...|. .++-++.++ ..+|.||+++|+++|++... ...+ +|+++..++.. |.. +++
T Consensus 119 f~Tt~ahIe~~Ga---v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~-~~~~-lV~~e~t~N~~GG~pvs~~~l 193 (450)
T TIGR02618 119 FTTTRYHQEKNGA---TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGA-DKIP-YICLAVTVNLAGGQPVSMANM 193 (450)
T ss_pred HHHHHHHHHhCCe---EEEeeecccccccccCCCCCCCcCHHHHHHHhccccC-cccC-ceEEEEecccCCCeeCCHHHH
Confidence 766666 677787 666664431 23579999999999985321 1223 45555555555 666 678
Q ss_pred hHHHHHHHHhCCEEEeecccccc-cccCc----cch-----hhhc-CCCCCCeeEEccCCcCCCCCcceEEEeeCchhhh
Q 037144 253 KPLCDVAKQFGIWVHVDAAYAGS-ACICP----EFR-----HFID-GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLL 321 (502)
Q Consensus 253 ~eI~~i~~~~g~~lhVDaA~g~~-~~~~~----~~~-----~~~~-~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~ 321 (502)
++|.++|++||+++|.|||+... ++++. .+. .... -.+.+|++++++||.+++|. .|++++++++...
T Consensus 194 ~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~-GG~l~~~d~~l~~ 272 (450)
T TIGR02618 194 REVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNI-GGFLCMNDDEMFQ 272 (450)
T ss_pred HHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCC-ceEEEeCCHHHHH
Confidence 99999999999999999998663 33221 111 1011 13479999999999999996 4566668876654
Q ss_pred hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
.+-.....| .. . ..++.-.+|... ++..+++..- -+...++....+++|.+.|.+. |+.+
T Consensus 273 k~r~~~~~~-eG----------~---~tyGgla~r~~~--ala~gL~e~~---~~~y~~~r~~~a~~La~~L~~~-Gvpv 332 (450)
T TIGR02618 273 SAKELVVVF-EG----------M---PSYGGLAGRDME--AMAIGIREAV---DYEYIEHRVKQVRYLGDKLKAA-GVPI 332 (450)
T ss_pred HHHHHhhhc-CC----------c---cccCchhhhhHH--HHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHC-CCcc
Confidence 432222222 10 0 001100111111 1122232211 1245666777899999999998 8999
Q ss_pred ecCCCeeEEEEEeec--CcchhhhhhcccCCCcccccccchhHhhHHH-HHHHHHHHH-hcCcEEEEeeeE---------
Q 037144 402 AFPRNFSLVCFRVTP--SAVMDKLRTKYKNGTYDQYRQFSEEERTNEF-NRELLESIN-VSGKVFMTHAIV--------- 468 (502)
Q Consensus 402 ~~~~~~~~v~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~-~~g~~~~~~~~~--------- 468 (502)
+.|+..+.|.+.... +.+ .. .++ ...|.-+|. +.|.=-+--+.+
T Consensus 333 ~~p~ggh~V~vda~~~lph~--------------------~~---~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~ 389 (450)
T TIGR02618 333 VEPVGGHAVFLDARRFLPHI--------------------PQ---DQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTG 389 (450)
T ss_pred cCCCCcceEEEEhHHhCCCC--------------------Ch---hhChHHHHHHHHHHHhCccEEeecceecccCCCCC
Confidence 877777777665432 110 00 011 223333332 234311111111
Q ss_pred ----CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 469 ----GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 469 ----~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
..-..+|+++---.-|.+++|...+.|..+.+
T Consensus 390 ~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~ 425 (450)
T TIGR02618 390 EHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYK 425 (450)
T ss_pred cccCCccceeeeccccccccHhHHHHHHHHHHHHHh
Confidence 01257999985444466799999999988765
No 271
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.67 E-value=5.4e-14 Score=140.83 Aligned_cols=298 Identities=9% Similarity=0.034 Sum_probs=186.1
Q ss_pred HHHHHHHHHhhcCCCC-cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 90 AGIVGEMLSSGFNVVG-LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~-~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
|..+.+.+...+.... ..|. .+...++.+.+.+|+.+.. ++++ ..++|+|+++++..++.+.
T Consensus 34 p~~~~~~~~~~~~~~~~~~Y~-~~~~~~Lr~aia~~~~~~~-~~~~-------~i~it~Ga~~~i~~~~~~~-------- 96 (335)
T PRK14808 34 PEDLVDEVFRRLNSDTLRIYY-DSPDEELIEKILSYLDTDF-LSKN-------NVSVGNGADEIIYVMMLMF-------- 96 (335)
T ss_pred CHHHHHHHHHHhhhhhhhcCC-CCChHHHHHHHHHHhCCCC-CCcc-------eEEEcCCHHHHHHHHHHHh--------
Confidence 3344454444443221 1232 3456677777777766542 5443 6899999999887665432
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+.|++.+++|..+..+++..|+ +++.+|++. ++.++... +. . ..+|+++.++|+||.
T Consensus 97 -------d~v~v~~P~y~~~~~~~~~~g~---~~~~v~~~~--~~~~~~~~----~~-~------~~~i~i~nP~NPTG~ 153 (335)
T PRK14808 97 -------DRSVFFPPTYSCYRIFAKAVGA---KFLEVPLTK--DLRIPEVN----VG-E------GDVVFIPNPNNPTGH 153 (335)
T ss_pred -------CcEEECCCCHHHHHHHHHHcCC---eEEEecCCC--cCCCChhH----cc-C------CCEEEEeCCCCCCCC
Confidence 1266778899999999999999 999999875 35555332 11 1 237888999999999
Q ss_pred cCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCC
Q 037144 249 VDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTN 327 (502)
Q Consensus 249 idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~ 327 (502)
+-+.+++.+++ ++++|+++|.+|..+. .......+...++ -.++.++.|.++ ....+|+++.. +.... .+...
T Consensus 154 ~~s~~~l~~l~-~~~~~ii~DE~Y~~f~--~~~~~~~~~~~~~-vi~~~S~SK~~~l~GlRvG~~v~~-~~~~~-~l~~~ 227 (335)
T PRK14808 154 VFEREEIERIL-KTGAFVALDEAYYEFH--GESYVDLLKKYEN-LAVIRTFSKAFSLAAQRIGYVVSS-EKFID-AYNRV 227 (335)
T ss_pred CcCHHHHHHHH-hcCCEEEEECchhhhc--CCchHHHHHhCCC-EEEEEechhhccCcccceEEEEeC-HHHHH-HHHHh
Confidence 99999999998 5899999999997642 1111111221111 145567999998 55677888764 33332 22111
Q ss_pred cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 037144 328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN 406 (502)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~ 406 (502)
.... + ...+..+++...+ ..+.+.+..+...+.++++.+.|++. |+++. +++
T Consensus 228 ~~~~-------------------~------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~ 280 (335)
T PRK14808 228 RLPF-------------------N------VSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYRIT-DSR 280 (335)
T ss_pred cCCC-------------------C------CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEC-CCC
Confidence 1000 0 0112222222222 23445666677777788899999887 78765 567
Q ss_pred eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144 407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES 486 (502)
Q Consensus 407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~ 486 (502)
.+++.+++... + ..++.+.+.++|..+.. + ..++|++++ +.+
T Consensus 281 g~f~~~~l~~~---------------------------~--~~~~~~~l~~~Gi~V~~---~--~~~~Risi~----~~~ 322 (335)
T PRK14808 281 GNFVFIFMEKE---------------------------E--KERLLEHLRAKNIAVRS---F--REGVRITIG----KRE 322 (335)
T ss_pred CeEEEEeCCCc---------------------------c--HHHHHHHHHHCCeEEEE---C--CCCeEEecC----CHH
Confidence 77776655421 1 24567778888875442 2 247999986 456
Q ss_pred HHHHHHHHHHHH
Q 037144 487 HVRAAWTVVQEH 498 (502)
Q Consensus 487 di~~~~~~l~~~ 498 (502)
+.++++++|++.
T Consensus 323 ~~~~~~~~l~~~ 334 (335)
T PRK14808 323 ENDMILKELEVF 334 (335)
T ss_pred HHHHHHHHHHhh
Confidence 899999998753
No 272
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.67 E-value=7.2e-14 Score=142.63 Aligned_cols=297 Identities=13% Similarity=0.026 Sum_probs=167.3
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC-chhHHHHHHH
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT-HCAFQKAAQI 194 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~-H~s~~~aa~~ 194 (502)
....++.+++++++|.+ ..+++.||++|+..++.+++...... +.+++.|++.+.+ |.+...+ ..
T Consensus 69 ~~~~~l~~~la~~~g~~---------~~~~~~sg~~a~~~a~~~~~~~~~~~----~~~~~~vi~~~~~yh~~~~~~-~~ 134 (379)
T TIGR00707 69 EPQEELAEKLVEHSGAD---------RVFFCNSGAEANEAALKLARKYTGDK----GKEKKKIIAFENSFHGRTMGA-LS 134 (379)
T ss_pred HHHHHHHHHHHhhCCCC---------EEEEeCCcHHHHHHHHHHHHHHhhcc----CCCCCeEEEECCCcCCccHHH-HH
Confidence 34556777788888875 37899999999999988775431100 1123455555444 4333222 22
Q ss_pred cCCCCCCE---EEEecCCCCCcc--cCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc----CChhHHHHHHHHhCCE
Q 037144 195 VGIDRKNI---RAIKTTKSSSYG--LSAESVLSQINLDVEAELIPLFLCATVGTTAITAV----DPLKPLCDVAKQFGIW 265 (502)
Q Consensus 195 ~Glg~~~v---~~v~~~~~~~~~--~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i----dpl~eI~~i~~~~g~~ 265 (502)
.+.. .. ...++..+-.+. .|+++|++.+++++ .+|+++...+++|.. +++++|.++|++||++
T Consensus 135 ~~~~--~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~ 206 (379)
T TIGR00707 135 ATGQ--PKYQKGFEPLVPGFSYAPYNDIESLKKAIDDET------AAVIVEPIQGEGGVNPASAEFLKALREICKDKDAL 206 (379)
T ss_pred hcCC--hhhhccCCCCCCCceeeCCCCHHHHHHHhhhCe------eEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 3220 11 112222111111 18999999887543 367777766666754 2489999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV 345 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (502)
+++|++|.++............++ ..|.++ ++|.++.+...|+++.. ++.. +.+.... ..
T Consensus 207 ~i~De~~~~~~~~g~~~~~~~~~~-~~d~~t--~sK~~~~G~riG~~~~~-~~~~-~~~~~~~--~~------------- 266 (379)
T TIGR00707 207 LIFDEVQTGIGRTGKFFAYEHYGI-EPDIIT--LAKGLGGGVPIGATLAK-EEVA-EAFTPGD--HG------------- 266 (379)
T ss_pred EEEeccccCCCccchhhhHHhcCC-CCCEEE--EcccccCCcccEEEEEc-HHHH-hhhcCCC--CC-------------
Confidence 999999975422111010001122 346555 57999966778887764 3332 2221110 00
Q ss_pred CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-c--CCCeeEEEEEeecCcchhh
Q 037144 346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA-F--PRNFSLVCFRVTPSAVMDK 422 (502)
Q Consensus 346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~-~--~~~~~~v~f~~~~~~~~~~ 422 (502)
. ++ +........++++++.+.. .++.++..++++++++.|+++ +.... . ++..+++.+.+.+.
T Consensus 267 --~--~~-~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~g~~~~~~~~~~----- 332 (379)
T TIGR00707 267 --S--TF-GGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEEL-GKNYPNKEVRGKGLMLGIELEAP----- 332 (379)
T ss_pred --C--CC-CCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHH-HhhCCCCccccCceEEEEEecCc-----
Confidence 0 00 1111223344455554432 245667777888888887764 22221 1 12334555654321
Q ss_pred hhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 423 LRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
..++.+.|.++|..+... +..++|++++.. .++++++++++.|+++
T Consensus 333 -------------------------~~~~~~~l~~~Gv~v~~~----~~~~lRi~~~~~-~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 333 -------------------------CKDIVKKALEKGLLVNCA----GPKVLRFLPPLI-ITKEEIDEAVSALEEA 378 (379)
T ss_pred -------------------------HHHHHHHHHHCCcEEeeC----CCCEEEEECCCc-CCHHHHHHHHHHHHHh
Confidence 246677777888754432 346899997533 4566999999999865
No 273
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.67 E-value=7.9e-14 Score=133.20 Aligned_cols=244 Identities=14% Similarity=0.176 Sum_probs=161.0
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc--
Q 037144 108 WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH-- 185 (502)
Q Consensus 108 ~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H-- 185 (502)
..+.|....+|+++ +.+=|- -.++.++||..|..+|+..... .++.|+.|..-+
T Consensus 58 Ri~NPT~~vlE~Ri----AaLEGG---------~aa~a~aSG~AA~~~ai~~la~-----------aGD~iVss~~LYGG 113 (426)
T COG2873 58 RIMNPTTDVLEERI----AALEGG---------VAALAVASGQAAITYAILNLAG-----------AGDNIVSSSKLYGG 113 (426)
T ss_pred eccCchHHHHHHHH----HHhhcc---------hhhhhhccchHHHHHHHHHhcc-----------CCCeeEeeccccCc
Confidence 34788888888774 444221 1457788888888888876544 567776665443
Q ss_pred --hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC
Q 037144 186 --CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG 263 (502)
Q Consensus 186 --~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g 263 (502)
.-+....+.+|+ +++.|+.+ |++.++++|+++++ +|.+..-.|+.+.+-|+++|+++|+++|
T Consensus 114 T~~lf~~tl~~~Gi---~v~fvd~~-------d~~~~~~aI~~nTk------avf~EtigNP~~~v~Die~ia~iAh~~g 177 (426)
T COG2873 114 TYNLFSHTLKRLGI---EVRFVDPD-------DPENFEAAIDENTK------AVFAETIGNPGLDVLDIEAIAEIAHRHG 177 (426)
T ss_pred hHHHHHHHHHhcCc---EEEEeCCC-------CHHHHHHHhCcccc------eEEEEeccCCCccccCHHHHHHHHHHcC
Confidence 234455688999 99999753 79999999999987 7888888889999999999999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCch--hh-----hhhhcCCcccccCcc
Q 037144 264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPS--CL-----LSTLSTNPQYLKNEA 335 (502)
Q Consensus 264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~--~l-----~~~~~~~~~yl~~~~ 335 (502)
+.++||-..+..++ +...++ +||.|+-|..||+++. -..|.+++-... +. .......+.|-....
T Consensus 178 vpliVDNT~atpyl-~rP~~h------GADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~ 250 (426)
T COG2873 178 VPLIVDNTFATPYL-CRPIEH------GADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVY 250 (426)
T ss_pred CcEEEecCCCccee-cchhhc------CCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceeh
Confidence 99999999988744 433343 9999999999999743 345556553221 10 000011111211100
Q ss_pred CCCCCcccccCCC-cccccCCCC----CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144 336 TDQEPKEQEVGYK-DWQITLCRR----FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF 403 (502)
Q Consensus 336 ~~~~~~~~~~~~~-~~~~~~sr~----~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~ 403 (502)
.+ ..+...+. ....++-|. ..+...|..++ |.|-+.-++++++++|..+.+.|+++|.+.-++
T Consensus 251 ~~---~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lq--GlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~ 318 (426)
T COG2873 251 TE---TFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQ--GLETLSLRMERHCENALKVAEFLENHPKVAWVN 318 (426)
T ss_pred hh---hcccHHHHHHHHHHHHHhcccccCcHHHHHHHh--chhhhHHHHHHHHHhHHHHHHHHhcCCCeeeee
Confidence 00 00000000 000011121 23344454443 788899999999999999999999999988664
No 274
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.67 E-value=2.3e-14 Score=134.20 Aligned_cols=313 Identities=16% Similarity=0.101 Sum_probs=215.6
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHH-HHHHHHHHhCccCCCCeEEEeCCCCc-----
Q 037144 112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTA-ARDRVLKKIGRENISKLVVYSSDQTH----- 185 (502)
Q Consensus 112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~-a~~~~~~~~~~~~~~~~~v~~s~~~H----- 185 (502)
+....+-..+.+.++.++|...+ +.+++.+.| .|+.-+++ +... .++..|++|+..-
T Consensus 72 ~~W~~lp~~lgdklApLiGA~~~-------Evvv~dtts-~nl~k~L~aalr~---------~~~r~vIv~E~~~fpTdl 134 (407)
T COG3844 72 ADWFDLPERLGDKLAPLIGARAG-------EVVVTDTTS-INLFKVLAAALRP---------QEGRRVIVSEGDNFPTDL 134 (407)
T ss_pred CchhhchhHHHHHhhhhhcCCCC-------ceEEeCCcc-hHHHHHHHHHhcc---------CCCceEEeecCCCCCcch
Confidence 34456667788999999999765 566666654 45444443 3321 0244566665432
Q ss_pred hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 186 ~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
|..+..++++|+|.+ + .+.+.|+++++++++++. +|++++...-||..-++.+|.++++++|++
T Consensus 135 y~a~g~~~~~~~~~~-~---------~~~~~P~~~~~~~~dd~A------vV~L~~V~y~TGql~dm~aiT~~AH~~gal 198 (407)
T COG3844 135 YIAEGLADLLGIGYD-L---------EGVIAPRALEEAITDDVA------VVLLSHVNYKTGQLLDMRAITALAHQHGAL 198 (407)
T ss_pred hhhcchhhhhccccc-c---------eeeeChHHHHHhhccceE------EEEeccccccccceeeHHHHHHHHHhcCce
Confidence 455667788887421 1 246678899999999875 899999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE 344 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 344 (502)
+.-|=||+++.++.+-+.. ++|+-+++.||+|+ +|.+.+++++.++.. .........|+.....-. ....
T Consensus 199 v~wDLAHsaGavp~~Lh~~------gaDfaigcsyKYLNgGPGapa~l~v~~~h~-e~~~~~lsgW~gha~pf~--m~~~ 269 (407)
T COG3844 199 VGWDLAHSAGAVPVDLHAA------GADFAIGCSYKYLNGGPGAPAGLFVAPRHR-ERSWPPLSGWWGHARPFA--MEEV 269 (407)
T ss_pred EEeehhcccCCcceeeccc------CCCeeeeeeceeccCCCCCceeEEeccccc-cccccccccccCCCCcch--hhhc
Confidence 9999999999988775554 89999999999996 676778888755432 223333344544321100 0000
Q ss_pred c--CCCcccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-C--CeEEecCC----CeeEEEEE
Q 037144 345 V--GYKDWQITLCRR--FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-K--RFEVAFPR----NFSLVCFR 413 (502)
Q Consensus 345 ~--~~~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~--~~~l~~~~----~~~~v~f~ 413 (502)
+ ..+-..+.++.. ....++-.+|..++.-++.++.++...++++|.+.++.. + ++++..|. +.+.|+|.
T Consensus 270 y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~ 349 (407)
T COG3844 270 YAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLY 349 (407)
T ss_pred cCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEe
Confidence 0 111112222222 122344556666777779999999999999999999763 3 67787652 35677877
Q ss_pred eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHH
Q 037144 414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWT 493 (502)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~ 493 (502)
.+. ..++.+.|.++|.+ +.++...+|||.++-.+++-+||=.+++
T Consensus 350 hp~-------------------------------~~~V~qaLi~rGVi----gD~R~P~vlRfgftPlY~~~~DVw~AV~ 394 (407)
T COG3844 350 HPH-------------------------------GYQVMQALIDRGVI----GDFREPDVLRFGFTPLYVSFVDVWDAVD 394 (407)
T ss_pred cCc-------------------------------HHHHHHHHHHcCcc----ccccCCCeeeecCccceechhHHHHHHH
Confidence 653 24567777778965 3456678999999988899999999999
Q ss_pred HHHHHHHh
Q 037144 494 VVQEHLEA 501 (502)
Q Consensus 494 ~l~~~~~~ 501 (502)
.|.++.++
T Consensus 395 ~L~evL~t 402 (407)
T COG3844 395 ALEEVLDT 402 (407)
T ss_pred HHHHHHHh
Confidence 99998764
No 275
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.66 E-value=1.7e-14 Score=144.13 Aligned_cols=286 Identities=11% Similarity=0.094 Sum_probs=165.1
Q ss_pred cccCCCCCCHHHHHHHHHHhhc-CCCCcc------cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144 80 FAYFPATSSVAGIVGEMLSSGF-NVVGLD------WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA 152 (502)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~-n~~~~~------~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a 152 (502)
+..+++-..+...+.+.+.+.+ |.+... |.......++|.-+.+.++++||+++...+ .-+=..||+.|
T Consensus 23 l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~----anvqp~SGs~A 98 (399)
T PF00464_consen 23 LNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWY----ANVQPHSGSQA 98 (399)
T ss_dssp EE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEE----EE---SSHHHH
T ss_pred ccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccce----EEeecCCchHH
Confidence 4445554444555555655544 333322 334456789999999999999999743211 12335588999
Q ss_pred HHHHHHHHHHHHHHHhCccCCCCeEEEeC---CCCchhHHHHHHH-------cCCCCCCEEEEecCCCCCcccCHHHHHH
Q 037144 153 LLCTLTAARDRVLKKIGRENISKLVVYSS---DQTHCAFQKAAQI-------VGIDRKNIRAIKTTKSSSYGLSAESVLS 222 (502)
Q Consensus 153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s---~~~H~s~~~aa~~-------~Glg~~~v~~v~~~~~~~~~~d~~~Le~ 222 (502)
|+.++.+..+ +++.|+.- .-+|.|.-..... ... +++.+++|++ ++.+|.+++++
T Consensus 99 n~av~~aLl~-----------pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~---~~~~y~~d~~-~~~ID~d~l~~ 163 (399)
T PF00464_consen 99 NLAVYMALLK-----------PGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYF---ESVPYPVDPD-TGLIDYDELEK 163 (399)
T ss_dssp HHHHHHHHT------------TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHS---EEEEEEB-TT-TSSB-HHHHHH
T ss_pred HHHHHHHHHh-----------hcCcEEecChhhcccccccccccccccccccceE---EEEeeeeecC-CCeECHHHHHH
Confidence 9777666654 56666543 3346654333222 334 6778888864 58999999999
Q ss_pred HHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCc
Q 037144 223 QINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKW 302 (502)
Q Consensus 223 ~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~ 302 (502)
.+.+.+ |.+|++-. +..-..-|++++.+||++.|++|++|+||-.+......+...+ +.||+++.+.||+
T Consensus 164 ~a~~~k-----PklIi~G~--S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~---~~ADvvt~sThKt 233 (399)
T PF00464_consen 164 LAKEHK-----PKLIICGA--SSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPF---PYADVVTGSTHKT 233 (399)
T ss_dssp HHHHH-------SEEEEE---SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GC---CTSSEEEEESSGG
T ss_pred HHhhcC-----CCEEEECc--hhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCcc---ccceEEEeecccc
Confidence 998754 55666543 2344457899999999999999999999977766554443333 3799999999999
Q ss_pred CCCCCcceEEEeeCc------------hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCC-CchHHHHHHHH
Q 037144 303 LFTTLDCCCLWVKDP------------SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRF-RSLKLWVVIRN 369 (502)
Q Consensus 303 l~~p~~~g~~~~r~~------------~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~ 369 (502)
|.+|. +|++++++. ..+.+.+.. .++. +.+++-.. ...++..+++.
T Consensus 234 l~GPr-ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~---avfP-----------------~~qg~~h~~~iaalAval~e 292 (399)
T PF00464_consen 234 LRGPR-GGIILTNKGSKNVDKKGKEIDEELAEKIDS---AVFP-----------------GLQGGPHMHRIAALAVALKE 292 (399)
T ss_dssp G-SSS--EEEEES-SEEEE-TTS-EEEHHHHHHHHH---HHTT-----------------TT-SS--HHHHHHHHHHHHH
T ss_pred ccccC-ceEEEEcCCccccCCcccccHHHHHHHhcc---ccCC-----------------CcccCcchhHHHHHHHHHhc
Confidence 99996 578777711 111111110 0110 11111111 12344456665
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeec
Q 037144 370 FGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTP 416 (502)
Q Consensus 370 ~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~ 416 (502)
.....+.+..++..++|+.|.+.|.+. |+.++.. .+..+|.+...+
T Consensus 293 a~~~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~ggTd~H~vlvd~~~ 339 (399)
T PF00464_consen 293 ALSPEFKEYAKQVVKNAKALAEALQER-GFKVVTGGTDNHQVLVDLRS 339 (399)
T ss_dssp HTSHHHHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS-SSSEEEEEGGG
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhhC-CcEEEECCCCCCeEEEEecc
Confidence 555667899999999999999999997 8999852 345677776654
No 276
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.66 E-value=3.9e-14 Score=146.44 Aligned_cols=336 Identities=12% Similarity=0.044 Sum_probs=187.0
Q ss_pred HHHHHHHHHhhcCCC-----CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHH
Q 037144 90 AGIVGEMLSSGFNVV-----GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRV 164 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~-----~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~ 164 (502)
...+.+.+...++.. ...|....+..++.+.+.+|+.+.+|.+-.. ...++|+|+++++..++.+....
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~-----~~I~it~Ga~~al~~~~~~l~~~- 120 (416)
T PRK09440 47 EDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISP-----QNIALTNGSQSAFFYLFNLFAGR- 120 (416)
T ss_pred HHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----hhEEEccChHHHHHHHHHHHhcc-
Confidence 455666666555432 1346555567889999999999888864221 26889999998886665544321
Q ss_pred HHHhCccCCCCeEEEe-CCCCchhHHHHHHHcCC-CCCCEEEEecCCCC-CcccCHHHHHHHHHHHHhcCCccEEEEEec
Q 037144 165 LKKIGRENISKLVVYS-SDQTHCAFQKAAQIVGI-DRKNIRAIKTTKSS-SYGLSAESVLSQINLDVEAELIPLFLCATV 241 (502)
Q Consensus 165 ~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~~~Gl-g~~~v~~v~~~~~~-~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~ 241 (502)
+.+ .+++.|++ ..+++..+..++...|. ....+..++++.++ ++.+|+++|+ +.. .+.+|+++.
T Consensus 121 ----~~~-~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~------~~~~i~l~~ 187 (416)
T PRK09440 121 ----RAD-GSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDE------DTGAICVSR 187 (416)
T ss_pred ----ccC-CCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCC------CceEEEEec
Confidence 000 13556777 56777777766554332 00023334443221 3679999987 221 234788889
Q ss_pred CCccccccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCch
Q 037144 242 GTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPS 318 (502)
Q Consensus 242 gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~ 318 (502)
++|+||.+-+ +++|+++|++|++|+++|.+|+... ....+.........--.+..+++|++.....+|+++. ++.
T Consensus 188 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~-~~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i~-~~~ 265 (416)
T PRK09440 188 PTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPF-PGIIFSEATPLWNPNIILCMSLSKLGLPGVRCGIVIA-DEE 265 (416)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccC-CCcchhhcCccccCCeEEEecccccCCCcceEEEEeC-CHH
Confidence 9999999955 7788899999999999999996321 1100111000000111445679998666667787765 443
Q ss_pred hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHH----H-HHHHHHHHHHHHHHHH
Q 037144 319 CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLR----N-FIRSHVGMAKLFERLV 393 (502)
Q Consensus 319 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~----~-~~~~~~~la~~l~~~l 393 (502)
.+. .+.....+... ....+...++.+.+....+. + +.+.+.++.+.+.+.|
T Consensus 266 l~~-~~~~~~~~~~~-----------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L 321 (416)
T PRK09440 266 IIE-ALSNMNGIISL-----------------------APGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALL 321 (416)
T ss_pred HHH-HHHHHHHHhcc-----------------------CCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322 22111111000 01234444444444221122 2 2333455556666666
Q ss_pred hcC-C--CeEEecCCC-eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC
Q 037144 394 TSD-K--RFEVAFPRN-FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG 469 (502)
Q Consensus 394 ~~~-~--~~~l~~~~~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~ 469 (502)
.+. + ++++. +|. ...+++.+++... + ..++.+.+.+.|..+.++..+.
T Consensus 322 ~~~l~~~~~~~~-~p~gg~fiw~~~~~~~~-------------------------~--~~~~~~~l~~~gV~v~pg~~F~ 373 (416)
T PRK09440 322 RRYLPDEPCLIH-KPEGAIFLWLWFKDLPI-------------------------T--TEELYQRLKARGVLVVPGHYFF 373 (416)
T ss_pred HHhcccCCeEEe-cCCCceEEEEECCCCCC-------------------------C--HHHHHHHHHHCCEEEechHhhC
Confidence 542 2 35544 444 3444444432111 0 1345566666787555443331
Q ss_pred -C--------EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 470 -G--------IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 470 -g--------~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+ ..++|++++. ++++++++++.|.++.++
T Consensus 374 ~~~~~~~~~~~~~iRis~~~---~~~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 374 PGLDEDWPHAHQCIRMNYVQ---DDEEIEKGIAILAEEVEK 411 (416)
T ss_pred CCCccccCCcCceEEEEecC---CHHHHHHHHHHHHHHHHH
Confidence 1 2489999973 467999999999887654
No 277
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.66 E-value=1.5e-13 Score=140.68 Aligned_cols=299 Identities=13% Similarity=0.075 Sum_probs=162.8
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI 197 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl 197 (502)
..++.+.|+++.+.+ .+++++||++||..|+.++|.....+ |..+ +..+|......|.+..-+....|.
T Consensus 75 ~~~la~~l~~~~~~~---------~v~~~~sGseA~~~al~~ar~~~~~~-G~~~-r~~vi~~~~~yhg~~~~~~~~~~~ 143 (389)
T PRK01278 75 QERLAERLVENSFAD---------KVFFTNSGAEAVECAIKTARRYHYGK-GHPE-RYRIITFEGAFHGRTLATIAAGGQ 143 (389)
T ss_pred HHHHHHHHHhhCCCC---------EEEEcCCcHHHHHHHHHHHHHHHHhc-CCCC-CCEEEEECCCcCCCcHHHHhccCC
Confidence 334556666765432 47999999999999999998753221 1100 223444444455444333333222
Q ss_pred CCCCEEE---EecCCCCCcc----cCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc----CChhHHHHHHHHhCCEE
Q 037144 198 DRKNIRA---IKTTKSSSYG----LSAESVLSQINLDVEAELIPLFLCATVGTTAITAV----DPLKPLCDVAKQFGIWV 266 (502)
Q Consensus 198 g~~~v~~---v~~~~~~~~~----~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i----dpl~eI~~i~~~~g~~l 266 (502)
.... .|..+ ++. .|+++|+++++++ +.+|+++...+++|.+ +++++|.++|++||+++
T Consensus 144 ---~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l~~~------~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~l 212 (389)
T PRK01278 144 ---EKYLEGFGPLVP--GFDQVPFGDIEALKAAITPN------TAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLL 212 (389)
T ss_pred ---hhhcccCCCCCC--CceEeCCCCHHHHHHhhCCC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 1111 01111 111 5899999988643 3467777666666733 57999999999999999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144 267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG 346 (502)
Q Consensus 267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (502)
++|.+|.++......+.....++ ..|.++ +.|.++..+..|+++.++. . .+.+.....+
T Consensus 213 I~DEv~~g~g~~g~~~~~~~~~~-~pdi~t--~sK~l~~G~~ig~~~~~~~-~-~~~~~~~~~~---------------- 271 (389)
T PRK01278 213 IFDEVQCGMGRTGKLFAHEWAGV-TPDIMA--VAKGIGGGFPLGACLATEE-A-AKGMTPGTHG---------------- 271 (389)
T ss_pred EEeccccCCCcCCcceeecccCC-CCCEEE--EehhccCCcceEEEEEcHH-H-HhccCCCCCC----------------
Confidence 99999986532211111001123 356554 5699876667888877543 2 2222111000
Q ss_pred CCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCe-EEecCCCeeEEEEEeecCcchh
Q 037144 347 YKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRF-EVAFPRNFSLVCFRVTPSAVMD 421 (502)
Q Consensus 347 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~-~l~~~~~~~~v~f~~~~~~~~~ 421 (502)
.++ ++.+..+.++.++++.+-.+ +..++..++.++++++|++ .+++ ..+ .+...++.+.+...
T Consensus 272 ---~t~-~~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v-~g~G~~~~i~~~~~---- 339 (389)
T PRK01278 272 ---STY-GGNPLAMAVGNAVLDVILAP---GFLDNVQRMGLYLKQKLEGLVDRFPDVIEEV-RGKGLLLGLKCVVP---- 339 (389)
T ss_pred ---CCC-CccHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-ecccEEEEEEEecC----
Confidence 011 11111222333344444222 2344555666666666654 3221 111 12222333333211
Q ss_pred hhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 422 KLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..++.+++.++|....+. +..++|++... ..++++|+++++.|++++++
T Consensus 340 --------------------------~~~~~~~l~~~GV~~~p~----~~~~lR~~p~~-~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 340 --------------------------NRDLVQALRDEGLLTVGA----GDNVVRLLPPL-IITEEEIDEALERLERAAES 388 (389)
T ss_pred --------------------------HHHHHHHHHHCCeEEeec----CCCEEEEeCCc-ccCHHHHHHHHHHHHHHHHh
Confidence 246677777788654332 34689999743 34677999999999998765
Q ss_pred C
Q 037144 502 F 502 (502)
Q Consensus 502 ~ 502 (502)
+
T Consensus 389 ~ 389 (389)
T PRK01278 389 L 389 (389)
T ss_pred C
Confidence 3
No 278
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.66 E-value=4.9e-13 Score=137.42 Aligned_cols=305 Identities=10% Similarity=0.047 Sum_probs=178.7
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC-chhHHHHHHH
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT-HCAFQKAAQI 194 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~-H~s~~~aa~~ 194 (502)
....++.+.|++++|.+ ..+++++|++||..|+..+|.....+.+.. .++.+|++...+ |-+...+..+
T Consensus 79 ~~~~~l~~~l~~~~~~~---------~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~-~~~~~i~~~~~~yhg~~~~~~~~ 148 (401)
T TIGR01885 79 DVFGEFAEYVTKLFGYD---------KVLPMNTGAEAVETAIKLARKWGYKVKGIP-ENQAIIVSAKGNFHGRTLGAISM 148 (401)
T ss_pred HHHHHHHHHHHhhcCCC---------EEEEeCccHHHHHHHHHHHHHHhhhhcCCC-CCCCEEEEECCCcCcccHHHHhC
Confidence 34445556677777753 478999999999999999987532211100 134566666656 5455555554
Q ss_pred cCC-------C--CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHH
Q 037144 195 VGI-------D--RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQ 261 (502)
Q Consensus 195 ~Gl-------g--~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~ 261 (502)
.|- | ...+..+|. -|+++|+++|++. +....+|++....+++|.+-| +++|.++|++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~ 218 (401)
T TIGR01885 149 STDPDSRTNFGPYVPGFKKIPY-------NNLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTK 218 (401)
T ss_pred cCCcccccccCCCCCCceEeCC-------CCHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHH
Confidence 331 1 012333432 2789999988642 223446666667778899877 9999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCC
Q 037144 262 FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEP 340 (502)
Q Consensus 262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 340 (502)
||+++++|.+|.+.......+.....++ ..|.++++ |.++.. +..|+++.+ ++.. +.+... +..
T Consensus 219 ~~~lli~DEv~~g~g~~G~~~~~~~~~~-~~di~~~g--K~l~~g~~~ig~v~~~-~~i~-~~~~~~--~~~-------- 283 (401)
T TIGR01885 219 HNVLLIADEIQTGLGRTGKLLCVDHENV-KPDIVLLG--KALSGGVYPVSAVLAD-DDVM-LTIKPG--EHG-------- 283 (401)
T ss_pred cCCEEEEechhhCCCccchhhHHhhcCC-CCCEEEee--ccccCCCCCcEEEEEc-HHHH-hhccCC--CCC--------
Confidence 9999999999865322111111111223 57888765 988755 456766654 3332 222110 000
Q ss_pred cccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCeeEEEEEeecCc
Q 037144 341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF--PRNFSLVCFRVTPSA 418 (502)
Q Consensus 341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~--~~~~~~v~f~~~~~~ 418 (502)
.+. ++.+.....+.++++.+..+ .+.++..+++++|++.|++++ ..++. .....++.+.+....
T Consensus 284 ---------~t~-~~~p~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~L~~l~-~~~~~~~~g~g~~~~i~~~~~~ 349 (401)
T TIGR01885 284 ---------STY-GGNPLACAVAVAALEVLEEE---KLAENAEKLGEIFRDQLKKLP-KPIITEVRGRGLLNAIVIDESK 349 (401)
T ss_pred ---------CCC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhcc-CCceeEEeecCeeEEEEeccCc
Confidence 011 11122333444555555333 344677788999999999873 23321 122334443333210
Q ss_pred chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
. .....++.++|.++|.. +.+. +...+|++.+ ...++++|++++++|+++
T Consensus 350 ---------------------~----~~~~~~l~~~l~~~Gv~-v~~~---~~~~lRi~p~-l~~t~~~i~~~l~~l~~~ 399 (401)
T TIGR01885 350 ---------------------T----GRTAWDLCLKLKEKGLL-AKPT---HGNIIRLAPP-LVITEEQLDEGLEIIKKV 399 (401)
T ss_pred ---------------------c----hhHHHHHHHHHHhCCEE-EEec---CCCEEEEeCC-ccCCHHHHHHHHHHHHHH
Confidence 0 01235778888888864 3332 3468999975 456778999999999876
Q ss_pred H
Q 037144 499 L 499 (502)
Q Consensus 499 ~ 499 (502)
.
T Consensus 400 l 400 (401)
T TIGR01885 400 I 400 (401)
T ss_pred h
Confidence 4
No 279
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.66 E-value=1.4e-14 Score=143.89 Aligned_cols=338 Identities=12% Similarity=0.014 Sum_probs=208.1
Q ss_pred ccccCCCCCCHH-HHHHHHHHhhcCCCCc------ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcE-EEcCCch
Q 037144 79 YFAYFPATSSVA-GIVGEMLSSGFNVVGL------DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGG-VIQGTTC 150 (502)
Q Consensus 79 ~~~~~~~~~~~~-~~~~~~l~~~~n~~~~------~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g-~~t~ggt 150 (502)
-+.|.+++...| .++..+-.+.+|..+. ...-++.+.++-+++.+.|+++++.|++. .+ ++++|||
T Consensus 5 ~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y------~Vlfl~GggT 78 (364)
T PRK12462 5 QLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEY------GVVFLQGGSS 78 (364)
T ss_pred cceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCC------eEEEEeccHH
Confidence 456666665555 5555555555554331 22356788999999999999999998654 44 5566677
Q ss_pred HHHHHHHHHHHHHHHHHhCccCCCCe-EE-EeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCC--CcccCHHHHHHHH
Q 037144 151 EALLCTLTAARDRVLKKIGRENISKL-VV-YSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSS--SYGLSAESVLSQI 224 (502)
Q Consensus 151 ~a~~~al~~a~~~~~~~~~~~~~~~~-~v-~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~--~~~~d~~~Le~~i 224 (502)
.+.-.++..... ++. ++ ++. .++.+ +.+-|+.+| ++..+...+.. ....+++.+ .+
T Consensus 79 ~~~ea~~~Nll~-----------~g~~~~~~~~-tG~fg~r~~~ea~~~g----~v~~~~~~~~~~~~~~p~~~~~--~~ 140 (364)
T PRK12462 79 LQFSMIPMNFSR-----------PGAAAPEYVT-TGYWSRKAIGEASRVA----AMRVVWDGAASGYRTLPSLAEL--DW 140 (364)
T ss_pred HHHHHHHHHcCC-----------CCCcEEEEEe-CCHHHHHHHHHHHhcC----CceEecCcCCCCCCcCCCHHHh--cc
Confidence 665444433322 233 33 333 35544 445555555 24444321111 124456654 12
Q ss_pred HHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC
Q 037144 225 NLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF 304 (502)
Q Consensus 225 ~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~ 304 (502)
.++ ..+|..|+..|.+|+..| ++.+.++..++||++-..+..+++- ++.|.+..+.+|.++
T Consensus 141 ~~d------~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~--------~~~dvi~agsQKnlg 201 (364)
T PRK12462 141 DAR------APFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDV--------EAYGMVYAHAQKNLG 201 (364)
T ss_pred CCC------CcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCCh--------HHccEEEeeccccCC
Confidence 222 237999999999999986 3334468999999987665555432 256999999999998
Q ss_pred CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHH--HHHHHHHHH
Q 037144 305 TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVA--NLRNFIRSH 382 (502)
Q Consensus 305 ~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~--g~~~~~~~~ 382 (502)
|.|.++++++++.+- ..-...+.|+.-.... + ...+..+.--+....+-.+++.+-.+ |++++.+++
T Consensus 202 -P~Gltvvivs~~al~-~~~~~~p~~ldy~~~~--------~-~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~ 270 (364)
T PRK12462 202 -PAGVTVAIIRRALLE-RVPDTLPPMLDFRTHV--------E-HRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDIN 270 (364)
T ss_pred -CCceEEEEECHHHHh-hccccCCchhhHHHHH--------h-cCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHH
Confidence 889999999877542 2212223333211000 0 00000000001123444566666666 999999999
Q ss_pred HHHHHHHHHHHhcCCCeEEec-CC---CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc
Q 037144 383 VGMAKLFERLVTSDKRFEVAF-PR---NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS 458 (502)
Q Consensus 383 ~~la~~l~~~l~~~~~~~l~~-~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 458 (502)
.+.++.+++.|.+.++|.... .+ ....|+|++.. .++..++.+...+.
T Consensus 271 ~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~----------------------------~~l~~~f~~~a~~~ 322 (364)
T PRK12462 271 ARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQ----------------------------PRLDTLFKEQSTEA 322 (364)
T ss_pred HHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCC----------------------------HHHHHHHHHHHHHC
Confidence 999999999999998676542 11 23467888653 23466788888888
Q ss_pred CcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 459 GKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 459 g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
|.+-+.+.. ..+.+|+|+=|. .+.+++++|++-+++..++
T Consensus 323 gl~~lkGhr--~vgg~Ras~yna-~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 323 GFCGLSGHR--SIGGIRASLYNA-VSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred CCccccCCc--ccCceEEEcCCC-CCHHHHHHHHHHHHHHHHh
Confidence 986655532 244599997554 5667999999999887654
No 280
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.65 E-value=1.3e-13 Score=137.77 Aligned_cols=286 Identities=14% Similarity=0.118 Sum_probs=197.5
Q ss_pred HHHHHHHHhcC-CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCC
Q 037144 120 IVMDWLGQMLD-LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID 198 (502)
Q Consensus 120 ~~~~~l~~l~g-~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg 198 (502)
++.+.+++.+| .+.. .+++..|+++.+-..+.+.+. +++.|+++.+++..+...++..|.
T Consensus 61 ~l~~a~a~~~~~~~~~-------~V~~gnGsde~i~~l~~~~~~-----------~gd~vl~~~Ptf~~Y~~~a~~~g~- 121 (356)
T COG0079 61 ELRAALAEYYGVVDPE-------NVLVGNGSDELIELLVRAFVE-----------PGDTVLIPEPTFSMYEIAAQLAGA- 121 (356)
T ss_pred HHHHHHHHHhCCCCcc-------eEEEcCChHHHHHHHHHHhhc-----------CCCEEEEcCCChHHHHHHHHhcCC-
Confidence 34455778888 4443 466677777766555544443 567888888999999999999999
Q ss_pred CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh--CCEEEeeccccccc
Q 037144 199 RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSA 276 (502)
Q Consensus 199 ~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~--g~~lhVDaA~g~~~ 276 (502)
+++.||.++ +.+|++.+.+++.++.+ +|+++.|+|+||..-+.++|.++++.. +.+++||.||.-+.
T Consensus 122 --~~~~v~~~~---~~~d~~~~~~~~~~~~~------lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~ 190 (356)
T COG0079 122 --EVVKVPLKE---FRLDLDAILAAIRDKTK------LVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFS 190 (356)
T ss_pred --eEEEecccc---cccCHHHHHHhhhcCCC------EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcC
Confidence 999999873 79999999999987443 899999999999998888888888754 78999999996654
Q ss_pred ccCccchhhhcCCCCCC--eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144 277 CICPEFRHFIDGVECVD--SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT 353 (502)
Q Consensus 277 ~~~~~~~~~~~~~~~aD--si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 353 (502)
- +..-..+. .-+ .+.=++.|.++ ....+|+ .+.++..+.......++|-.
T Consensus 191 ~--~~~~~l~~---~~~nlivlRTfSKa~gLAGlRlGy-~ia~~~~i~~l~~vr~p~~v--------------------- 243 (356)
T COG0079 191 P--ESSLELLK---YPPNLIVLRTFSKAFGLAGLRVGY-AIANPELIAALNKVRPPFNV--------------------- 243 (356)
T ss_pred C--chhhhhcc---CCCCEEEEEecHHhhhcchhceee-ccCCHHHHHHHHHhcCCCCC---------------------
Confidence 3 21111111 222 45556899876 4566777 45566554433333333311
Q ss_pred CCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144 354 LCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTY 432 (502)
Q Consensus 354 ~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 432 (502)
..+...++...+ -.+.+++.+++....++++.+.|++++ +.-+.++..|++.++....
T Consensus 244 -----~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~~~~--------------- 302 (356)
T COG0079 244 -----SSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLVRVPDA--------------- 302 (356)
T ss_pred -----CHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEEECCCc---------------
Confidence 233334444433 236678888889999999999999986 5533366677777776431
Q ss_pred ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee-ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI-VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
. ...+.+.|.++|.++-.... .....++|+++. ++++-++++++|+++.+.
T Consensus 303 -------------~-~~~l~~~L~~~giivR~~~~~~~~~~~lRitvg----t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 303 -------------E-AAALAEALLKKGILVRDCSSVGLLPGYLRITVG----TPEENDRLLAALREVLKG 354 (356)
T ss_pred -------------c-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeC----CHHHHHHHHHHHHHHHhc
Confidence 1 34677778888987655543 223569999987 445679999999987653
No 281
>PRK08354 putative aminotransferase; Provisional
Probab=99.65 E-value=7e-14 Score=138.68 Aligned_cols=148 Identities=14% Similarity=-0.030 Sum_probs=106.5
Q ss_pred HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK 200 (502)
Q Consensus 121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~ 200 (502)
+++++++.+|. .+++|+|+++++...+... . +++.|++..++|+.+..+++.+|+
T Consensus 45 l~~~ia~~~~~----------~I~vt~G~~~al~~~~~~~-~-----------~gd~vlv~~P~y~~~~~~~~~~g~--- 99 (311)
T PRK08354 45 LEEEFSKLFGE----------PIVITAGITEALYLIGILA-L-----------RDRKVIIPRHTYGEYERVARFFAA--- 99 (311)
T ss_pred HHHHHHHHHCC----------CEEECCCHHHHHHHHHHhh-C-----------CCCeEEEeCCCcHHHHHHHHHcCC---
Confidence 45677888762 4789999999876544221 1 567788899999999999999999
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSAC 277 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~ 277 (502)
+++.++ +|++.|++++++ + .+++.+.++|+||.+-+ +++|+++|+++|+|+++|.+|+.+..
T Consensus 100 ~~~~~~--------~d~~~l~~~~~~-~------~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~ 164 (311)
T PRK08354 100 RIIKGP--------NDPEKLEELVER-N------SVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVK 164 (311)
T ss_pred EEeecC--------CCHHHHHHhhcC-C------CEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccc
Confidence 886543 578888887752 1 26777889999999865 66777888999999999999977643
Q ss_pred cCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEe
Q 037144 278 ICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWV 314 (502)
Q Consensus 278 ~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~ 314 (502)
.. . . .. ..--.++.++.|.++ ....+|+++.
T Consensus 165 ~~-~--~-~~--~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 165 KP-E--S-PE--GENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred cc-c--c-cC--CCcEEEEeccHhhcCCccceeeeeee
Confidence 21 1 0 00 011244566899998 4466787775
No 282
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.64 E-value=6.4e-14 Score=141.25 Aligned_cols=236 Identities=17% Similarity=0.233 Sum_probs=161.2
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144 109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF 188 (502)
Q Consensus 109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (502)
...|....+|+. ++.+-|.. .++++++|..|+..++.+... +++.|+++...+...
T Consensus 52 ~gnPt~~~le~~----la~Le~g~---------~a~~~~SGmaAi~~~l~~ll~-----------~Gd~iv~~~~~Y~~t 107 (386)
T PF01053_consen 52 YGNPTVRALEQR----LAALEGGE---------DALLFSSGMAAISAALLALLK-----------PGDHIVASDDLYGGT 107 (386)
T ss_dssp TC-HHHHHHHHH----HHHHHT-S---------EEEEESSHHHHHHHHHHHHS------------TTBEEEEESSSSHHH
T ss_pred cccccHHHHHHH----HHHhhccc---------ceeeccchHHHHHHHHHhhcc-----------cCCceEecCCccCcc
Confidence 355666666655 67776653 468888998888777665543 567788887777655
Q ss_pred HHHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC-
Q 037144 189 QKAA----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG- 263 (502)
Q Consensus 189 ~~aa----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g- 263 (502)
.+.+ ...|+ ++..++. -|+++|+++++++++ +|.+..++|++..+-||++|+++|+++|
T Consensus 108 ~~~~~~~l~~~gv---~v~~~d~-------~d~~~l~~~l~~~t~------~v~~EspsNP~l~v~Dl~~i~~~a~~~g~ 171 (386)
T PF01053_consen 108 YRLLEELLPRFGV---EVTFVDP-------TDLEALEAALRPNTK------LVFLESPSNPTLEVPDLEAIAKLAKEHGD 171 (386)
T ss_dssp HHHHHHCHHHTTS---EEEEEST-------TSHHHHHHHHCTTEE------EEEEESSBTTTTB---HHHHHHHHHHTTT
T ss_pred hhhhhhhhcccCc---EEEEeCc-------hhHHHHHhhccccce------EEEEEcCCCcccccccHHHHHHHHHHhCC
Confidence 4443 44688 8877754 389999999988554 8999999999999999999999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144 264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK 341 (502)
Q Consensus 264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 341 (502)
++++||.+++.....-| ... +||.+.-+..|++++... .|++.+++...+...+......+
T Consensus 172 ~~~vVDnT~atp~~~~p-L~~------GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~---------- 234 (386)
T PF01053_consen 172 ILVVVDNTFATPYNQNP-LEL------GADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLL---------- 234 (386)
T ss_dssp -EEEEECTTTHTTTC-G-GGG------T-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHH----------
T ss_pred ceEEeeccccceeeecc-CcC------CceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhc----------
Confidence 99999999988754433 222 799999999999975532 56666666333322221111111
Q ss_pred ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cC-----C----------
Q 037144 342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA-FP-----R---------- 405 (502)
Q Consensus 342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~-~~-----~---------- 405 (502)
+-...+..+|..++ |.+-+..+++++.++|..+.+.|++.|.++-+ .| |
T Consensus 235 -------------G~~~~p~da~ll~r--gl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~ 299 (386)
T PF01053_consen 235 -------------GATLSPFDAWLLLR--GLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMS 299 (386)
T ss_dssp -------------T-B--HHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCS
T ss_pred -------------CccchHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeeccc
Confidence 11124567777776 56788999999999999999999999998743 32 1
Q ss_pred -CeeEEEEEeec
Q 037144 406 -NFSLVCFRVTP 416 (502)
Q Consensus 406 -~~~~v~f~~~~ 416 (502)
..++++|.+..
T Consensus 300 g~ggl~sf~l~~ 311 (386)
T PF01053_consen 300 GGGGLLSFELKG 311 (386)
T ss_dssp SCTSEEEEEESS
T ss_pred ccCceeEEEecc
Confidence 23588888865
No 283
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.64 E-value=3.1e-13 Score=137.86 Aligned_cols=290 Identities=13% Similarity=0.072 Sum_probs=166.7
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
.+++.++.+++++..+.+ ..++++||++||..|+..++... + ++.+|......|-+..-+...
T Consensus 70 ~~~~~~la~~l~~~~~~~---------~~~~~~sG~~a~~~A~~~a~~~~----g----~~~vi~~~~~~Hg~~~~~~~~ 132 (377)
T PRK02936 70 NSLQEEVASLLAENSAGD---------LVFFCNSGAEANEAALKLARKHT----G----KSKIVTFEQSFHGRTFGTMSA 132 (377)
T ss_pred CHHHHHHHHHHHhcCCCC---------EEEEeCCcHHHHHHHHHHHHHhc----C----CCeEEEECCCcCCCcHHhhhc
Confidence 567778888888876542 47999999999999999887531 0 233555555667665555444
Q ss_pred cCCCC---------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC----ChhHHHHHHHH
Q 037144 195 VGIDR---------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD----PLKPLCDVAKQ 261 (502)
Q Consensus 195 ~Glg~---------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id----pl~eI~~i~~~ 261 (502)
.|... ..+..+|. -|+++|++.+.+++ .+|++....+..|.+. ++++|.++|++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~~------~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~ 199 (377)
T PRK02936 133 TGQEKIKEGFGPLLPGFTHVPF-------NDIKALKEVMNEEV------AAVMLEVVQGEGGVIPADPAFLQEVQTLCKK 199 (377)
T ss_pred cCCccccccCCCCCCCceEeCC-------CCHHHHHHhccCCe------EEEEEecccCCCCCccCCHHHHHHHHHHHHH
Confidence 43210 01122221 17899999886433 3677776666666653 39999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144 262 FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK 341 (502)
Q Consensus 262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 341 (502)
||+++++|.+|.++............++ ..|.++ +.|.++..+..|+++.+ +.. .+.+.... + .
T Consensus 200 ~~~~lI~DEv~~g~g~~g~~~~~~~~~~-~~di~t--~sK~l~~G~~ig~v~~~-~~~-~~~~~~~~-~-~--------- 263 (377)
T PRK02936 200 FGALLIIDEVQTGIGRTGTLFAYEQFGL-DPDIVT--VAKGLGNGIPVGAMIGK-KEL-GTAFGPGS-H-G--------- 263 (377)
T ss_pred cCCEEEEeccccCCCcCchhhHHHhhCC-CCcEEE--EcccccCCCccEEEEEc-HHH-HhhccCCC-C-C---------
Confidence 9999999999976432111111001122 356554 67999865567877654 322 22321110 0 0
Q ss_pred ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeEEEEEeecC
Q 037144 342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNFSLVCFRVTPS 417 (502)
Q Consensus 342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~~~v~f~~~~~ 417 (502)
.+. ++.+....++.++++.+. ..+.+++..++.+++++.|++ .+.+.-+ .+...++.+.+.+.
T Consensus 264 --------~t~-~~~~~~~aaa~a~l~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v-~~~g~~~~i~~~~~ 330 (377)
T PRK02936 264 --------STF-GGNPLAMAAAKEVLQVIK---QPSFLEEVQEKGEYFLQKLQEELEHLECVKNI-RGKGLMIGIECTEE 330 (377)
T ss_pred --------CCC-CCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeE-eecceEEEEEecch
Confidence 000 111112223333343331 234556666777777777765 3332222 12233444544321
Q ss_pred cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144 418 AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~ 497 (502)
...+.+.+.++|.++.+ .+..++|++.. ...++++|+++++.|++
T Consensus 331 ------------------------------~~~~~~~l~~~gv~v~~----~g~~~lRi~p~-~~~~~~~i~~~i~~l~~ 375 (377)
T PRK02936 331 ------------------------------VAPVIEQLREEGLLVLS----AGPNVIRLLPP-LVVTKEELDQAVYLLKK 375 (377)
T ss_pred ------------------------------HHHHHHHHHHCCeEEec----CCCCEEEEECC-cccCHHHHHHHHHHHHH
Confidence 34567777778865433 23468999964 33567799999999976
Q ss_pred H
Q 037144 498 H 498 (502)
Q Consensus 498 ~ 498 (502)
+
T Consensus 376 ~ 376 (377)
T PRK02936 376 V 376 (377)
T ss_pred h
Confidence 5
No 284
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.63 E-value=6.8e-13 Score=136.46 Aligned_cols=300 Identities=13% Similarity=0.062 Sum_probs=169.0
Q ss_pred HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC--
Q 037144 119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG-- 196 (502)
Q Consensus 119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G-- 196 (502)
.++.+.|+++.+.+ ..++++||++||..|+..+|.......+ ..++.+|......|-+...+..+.|
T Consensus 85 ~~l~~~l~~~~~~~---------~~~~~~sGseA~e~a~klar~~~~~~~~--~~~~~ii~~~~~~HG~~~~~~~~~~~~ 153 (403)
T PRK05093 85 LRLAKKLIDATFAE---------RVFFANSGAEANEAAFKLARRYACDRHG--PEKTEIIAFHNSFHGRTLFTVSVGGQP 153 (403)
T ss_pred HHHHHHHHhhCCCC---------EEEEeCchHHHHHHHHHHHHHHHhhcCC--CCCCeEEEEcCCcCCchhhhHhhcCCh
Confidence 35556677766543 4799999999999999999876432111 1134566666667876554444322
Q ss_pred -----CC--CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCE
Q 037144 197 -----ID--RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIW 265 (502)
Q Consensus 197 -----lg--~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~ 265 (502)
.+ ...++.+|. -|++++++.+.++ +.+|++....+..|.+.| +++|.++|++||++
T Consensus 154 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~ 220 (403)
T PRK05093 154 KYSDGFGPKPADITHVPF-------NDLAAVKAVIDDH------TCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNAL 220 (403)
T ss_pred hhhhcCCCCCCCcEEeCC-------CCHHHHHHHhcCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 11 112333332 2789999888543 336666644444444433 99999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV 345 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (502)
+++|.+|.+.............++ ..|.++ +.|.++..+..|+++.++. . .+.+... ...
T Consensus 221 lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~s--~sK~l~~G~rig~vv~~~~-i-~~~l~~~---~~~------------ 280 (403)
T PRK05093 221 LIFDEVQTGMGRTGDLFAYMHYGV-TPDILT--SAKALGGGFPIGAMLTTAE-I-ASHFKVG---THG------------ 280 (403)
T ss_pred EEEechhhCCCCCccchhhhhcCC-CCCEEE--ecccccCCcceEEEEEcHH-H-HhhcCCC---CCC------------
Confidence 999999986432211110001122 356554 4699986677888887543 2 2222110 000
Q ss_pred CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecC-CC-eeEEEEEeecCcchhh
Q 037144 346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAFP-RN-FSLVCFRVTPSAVMDK 422 (502)
Q Consensus 346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~~-~~-~~~v~f~~~~~~~~~~ 422 (502)
.+. ++.+.....+..+++.+-. .+..++..++.++|.+.|+++. .+.++.. +. ..++.+.+.+..
T Consensus 281 ----~t~-~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~---- 348 (403)
T PRK05093 281 ----STY-GGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQY---- 348 (403)
T ss_pred ----CCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcc----
Confidence 000 0111122222333434311 3455777888888888887751 1112111 12 223344443210
Q ss_pred hhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 423 LRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.....++++.+.++|.++. + .+..++|++++.. .++++|+++++.|.++.++
T Consensus 349 ----------------------~~~~~~~~~~l~~~Gv~v~-~---~g~~~lRl~~~~~-~~~~~i~~~~~~l~~~l~~ 400 (403)
T PRK05093 349 ----------------------KGRARDFLNAAAEEGVMVL-V---AGPDVLRFAPSLV-IEEADIDEGLARFEKAVAK 400 (403)
T ss_pred ----------------------hhHHHHHHHHHHHCCeEEe-c---CCCCEEEEeCCCC-CCHHHHHHHHHHHHHHHHH
Confidence 1124567778888886443 3 2446899987543 4677999999999987754
No 285
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.63 E-value=2.6e-13 Score=139.50 Aligned_cols=328 Identities=14% Similarity=0.061 Sum_probs=188.2
Q ss_pred HHHHHHHHHHhhcCC-----CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHH
Q 037144 89 VAGIVGEMLSSGFNV-----VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDR 163 (502)
Q Consensus 89 ~~~~~~~~l~~~~n~-----~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~ 163 (502)
++..+.+.+...+.. ....|...++...+.+.+++++.+. +++.+ ..++|+|+++++.. +.....
T Consensus 47 ~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-~~~~d-------~I~it~Ga~~al~~-l~~l~~- 116 (402)
T TIGR03542 47 LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG-RIDPE-------EIFISDGAKCDVFR-LQSLFG- 116 (402)
T ss_pred CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc-CCCHH-------HEEECCCcHHHHHH-HHHhcC-
Confidence 344455554444322 1234655567778888888775332 45443 68999998887754 322211
Q ss_pred HHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC-C-------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccE
Q 037144 164 VLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI-D-------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL 235 (502)
Q Consensus 164 ~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl-g-------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~ 235 (502)
+++.|++..+++..+...++..|+ | ...++.+|+++.+++.+|.+. . . .+.
T Consensus 117 ----------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~--~------~~~ 175 (402)
T TIGR03542 117 ----------SDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE---E--P------KID 175 (402)
T ss_pred ----------CCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc---c--C------Cce
Confidence 566788888899889999998887 1 115677787643334444321 0 1 134
Q ss_pred EEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCC---CeeEEccCCcCC-CCCc
Q 037144 236 FLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECV---DSFSFNPHKWLF-TTLD 308 (502)
Q Consensus 236 ~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~a---Dsi~~~~hK~l~-~p~~ 308 (502)
+|+++.++|+||.+-+ +++|+++|++||+++++|.+|..+... +.....+..+... -.++.++.|.++ ....
T Consensus 176 ~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~-~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlR 254 (402)
T TIGR03542 176 IIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISD-PSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVR 254 (402)
T ss_pred EEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccC-CCCCcchhhCCCCcccEEEEecCccccCCCCcc
Confidence 7777899999999966 888999999999999999999765431 1111111112221 133567999996 5566
Q ss_pred ceEEEeeCchhhhhhh-cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHH
Q 037144 309 CCCLWVKDPSCLLSTL-STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVG 384 (502)
Q Consensus 309 ~g~~~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~ 384 (502)
.|+++..+. ...... .....+...... +. .....+...++...+ +...+.+.++.+.+
T Consensus 255 iG~~i~~~~-l~~~~~~~~~~~~~~~~~~--------------~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 316 (402)
T TIGR03542 255 LGWTVVPKE-LTYADGHSVIQDWERRQCT--------------KF---NGASYPVQRAAEAAYAGEGLQPILEAISYYME 316 (402)
T ss_pred eEEEEecHH-HhhcchhhHHHHHHHHhhh--------------cc---cCCCHHHHHHHHHHHcCcchhHHHHHHHHHHH
Confidence 788776432 210000 000001000000 00 000122222333333 12335556677778
Q ss_pred HHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEE
Q 037144 385 MAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFM 463 (502)
Q Consensus 385 la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~ 463 (502)
.++++.+.|++. ++++..+...+.+++++++. . + ..++.+.+.+ .|..+.
T Consensus 317 ~~~~~~~~L~~~-~~~~~~~~~~~f~~v~l~~~-~-------------------------~--~~~l~~~l~~~~gv~v~ 367 (402)
T TIGR03542 317 NARILRKALEAA-GFKVYGGEHAPYLWVKTPEG-I-------------------------S--SWDFFDFLLYQYHVVGT 367 (402)
T ss_pred HHHHHHHHHHhc-CceecCCCceeEEEEECCCC-C-------------------------C--HHHHHHHHHHhCCEEEe
Confidence 888899999886 67765333445566665431 1 0 1346666664 466544
Q ss_pred EeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 464 THAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 464 ~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
++..+. +..++|+++.. ++++++++++.|+++
T Consensus 368 pg~~f~~~~~~~iRis~~~---~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 368 PGSGFGPSGEGFVRFSAFG---KRENIVEACERIKEA 401 (402)
T ss_pred CchhhCCCCCCEEEEEecC---CHHHHHHHHHHHHhh
Confidence 444332 35799999753 567899999888764
No 286
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.63 E-value=4.8e-13 Score=137.41 Aligned_cols=300 Identities=12% Similarity=0.070 Sum_probs=167.7
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQ 193 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~ 193 (502)
.....++.++++++.|.+ ..++++||++|+..|+.+++... +..+.++..|+ .....|.....+..
T Consensus 80 ~~~~~~la~~l~~~~~~~---------~v~~~~gg~eA~~~al~~a~~~~----~~~~~~~~~ii~~~~~yhg~~~~~~~ 146 (396)
T PRK02627 80 IEPQEELAEKLVELSGMD---------KVFFCNSGAEANEAAIKLARKYG----HKKGIEKPEIITAENSFHGRTLATLS 146 (396)
T ss_pred CHHHHHHHHHHHhhcCCC---------EEEECCCcHHHHHHHHHHHHHHh----cccCCCCCeEEEECCCcCcccHHHHH
Confidence 456667778888887763 47999999999999999887642 11111123344 44444544333333
Q ss_pred HcCCCCCCEE---EEecCCCCCc----ccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc----CChhHHHHHHHHh
Q 037144 194 IVGIDRKNIR---AIKTTKSSSY----GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV----DPLKPLCDVAKQF 262 (502)
Q Consensus 194 ~~Glg~~~v~---~v~~~~~~~~----~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i----dpl~eI~~i~~~~ 262 (502)
..+. ... ..+... +. ..|+++|++++.++ +.+|+++...+++|.. +.+++|.++|++|
T Consensus 147 ~~~~---~~~~~~~~~~~~--~~~~~~~~d~~~l~~~i~~~------~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~ 215 (396)
T PRK02627 147 ATGQ---PKYQEGFEPLVE--GFIYVPFNDIEALKAAITDK------TAAVMLEPIQGEGGVNPADKEYLQALRELCDEN 215 (396)
T ss_pred hcCC---ccccccCCCCCC--CceEeCCCCHHHHHHhcCCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHc
Confidence 3332 111 111111 01 12899999988432 3467777667777732 3499999999999
Q ss_pred CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144 263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE 342 (502)
Q Consensus 263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 342 (502)
|+++++|.+|.++............++ ..|.++ +.|.++.....|+++.++. .. +.+... ...
T Consensus 216 ~~~lI~DE~~~g~g~~g~~~~~~~~~~-~pdi~t--~sK~~~~G~rig~~~~~~~-~~-~~~~~~----~~~-------- 278 (396)
T PRK02627 216 GILLILDEVQTGMGRTGKLFAYQHYGI-EPDIMT--LAKGLGGGVPIGAVLAKEK-VA-DVFTPG----DHG-------- 278 (396)
T ss_pred CCEEEEechhcCCCccCceeeehhcCC-CCCEEE--EcchhhCCcccEEEEEcHH-HH-hccCCC----CCC--------
Confidence 999999999986532211000001122 356655 5699986677888887533 22 222110 000
Q ss_pred cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeEEEEEeecCc
Q 037144 343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFPRNFSLVCFRVTPSA 418 (502)
Q Consensus 343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~~~~~~v~f~~~~~~ 418 (502)
. +. +........+..+++.+.. .+..++..++.+++++.|.++ |.+..+ .....++.+.+...
T Consensus 279 -----~--t~-~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~i~~~~~- 345 (396)
T PRK02627 279 -----S--TF-GGNPLACAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEKYPGIKEV-RGLGLMIGIELDRP- 345 (396)
T ss_pred -----C--CC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeeee-ccCcEEEEEEecCc-
Confidence 0 00 1111122223334433322 234555666666666666543 222222 22334455554211
Q ss_pred chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
..++.+++.++|.++ .+. +..++|+++. ...++++|+++++.|+++
T Consensus 346 -----------------------------~~~~~~~l~~~Gv~v-~~~---~~~~lRi~~~-~~~~~~~i~~~~~~l~~~ 391 (396)
T PRK02627 346 -----------------------------AAEIVKKALEKGLLI-NVT---GDNVLRLLPP-LIISKEEIDEAVDRLEEV 391 (396)
T ss_pred -----------------------------HHHHHHHHHHCCeEE-eec---CCCEEEEECC-cccCHHHHHHHHHHHHHH
Confidence 246777787788654 332 2367999874 335677999999999988
Q ss_pred HHhC
Q 037144 499 LEAF 502 (502)
Q Consensus 499 ~~~~ 502 (502)
.+++
T Consensus 392 l~~~ 395 (396)
T PRK02627 392 LKEL 395 (396)
T ss_pred HHhh
Confidence 7653
No 287
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.62 E-value=1.1e-12 Score=132.72 Aligned_cols=251 Identities=12% Similarity=0.074 Sum_probs=155.8
Q ss_pred CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC
Q 037144 105 GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT 184 (502)
Q Consensus 105 ~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 184 (502)
-..|..+|.+.++|+. +++++|.+. .+.|++||.|+..+...... ++++| +...
T Consensus 71 Dd~Yagd~s~~~LE~~----vAe~lG~e~---------aV~v~sGTaAl~ll~~l~v~-----------pGd~V--p~n~ 124 (460)
T PRK13237 71 DEAYAGSRNFYHLEET----VQEYYGFKH---------VVPTHQGRGAENLLSRIAIK-----------PGQYV--PGNM 124 (460)
T ss_pred chhhcCCCcHHHHHHH----HHHHHCCCe---------EEEeCCHHHHHHHHHHhCCC-----------CcCEE--CCcc
Confidence 3468889999999987 456777763 68899999998764222111 45554 6677
Q ss_pred chhHHHH-HHHcCCCCCCEEEEecC--------CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc-c---cCC
Q 037144 185 HCAFQKA-AQIVGIDRKNIRAIKTT--------KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT-A---VDP 251 (502)
Q Consensus 185 H~s~~~a-a~~~Glg~~~v~~v~~~--------~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G-~---idp 251 (502)
|.+-.++ +...|. ..+-+..+ ...+|.||++.|+++|++... ..+.+|.++..++..| . .++
T Consensus 125 ~f~Tt~ahI~~~Ga---~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~--~~~~lV~a~itvn~~GGqpvs~~~ 199 (460)
T PRK13237 125 YFTTTRYHQELNGG---IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGA--ENIAYICLAVTVNLAGGQPVSMAN 199 (460)
T ss_pred chHhhHHHHHhCCc---EEEeeecccccccccCCCCCCCcCHHHHHHHhccccC--CccCceEEEEecccCCCeeCCHHh
Confidence 8777666 566666 44333211 112589999999999985422 1223456666666664 3 357
Q ss_pred hhHHHHHHHHhCCEEEeecccccccc-cC----ccchhhh------cCCCCCCeeEEccCCcCCCCCcceEEEeeCchhh
Q 037144 252 LKPLCDVAKQFGIWVHVDAAYAGSAC-IC----PEFRHFI------DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCL 320 (502)
Q Consensus 252 l~eI~~i~~~~g~~lhVDaA~g~~~~-~~----~~~~~~~------~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l 320 (502)
+++|.++|++||+++|.|+|+..+.. ++ +.+...- .-.+.+|.+++|+||.+.+|. .|++++++++..
T Consensus 200 m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~-GG~i~t~D~eL~ 278 (460)
T PRK13237 200 MRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI-GGFLAMNDEELF 278 (460)
T ss_pred HHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC-ceEEEECCHHHH
Confidence 89999999999999999999875522 22 1122110 012479999999999999875 577778887665
Q ss_pred hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144 321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFE 400 (502)
Q Consensus 321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~ 400 (502)
...-.....|- +...++.. .+|...+++ ..+...-. ...+++....+++|.+.|.+. |+.
T Consensus 279 ~~~r~~~~~~e-----------G~~tygg~---~grd~~alA--vgl~E~~~---~~y~~~ri~~~~~l~~~L~~~-Gvp 338 (460)
T PRK13237 279 DEAKELVVVYE-----------GMPSYGGM---AGRDMEAMA--IGIEESVQ---YEYIEHRVGQVRYLGEKLLAA-GVP 338 (460)
T ss_pred HHHHHhccccC-----------CCcCCCCh---hhhHHHHHH--hHHHhhch---HHHHHHHHHHHHHHHHHHHHC-CCc
Confidence 44322222221 11111110 122222222 12222111 267777888899999999887 899
Q ss_pred EecCCCe
Q 037144 401 VAFPRNF 407 (502)
Q Consensus 401 l~~~~~~ 407 (502)
++.|...
T Consensus 339 v~~p~gg 345 (460)
T PRK13237 339 IVEPVGG 345 (460)
T ss_pred eecCCCc
Confidence 8865443
No 288
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.62 E-value=2e-14 Score=139.93 Aligned_cols=340 Identities=12% Similarity=0.071 Sum_probs=210.5
Q ss_pred CCCcccccCCCCCCHHHHHHHHHHh-hcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144 75 QSPNYFAYFPATSSVAGIVGEMLSS-GFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL 153 (502)
Q Consensus 75 ~~p~~~~~~~~~~~~~~~~~~~l~~-~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~ 153 (502)
.+=+|+||-.+.........+.+.. .++......+ -+..+..+++.+.+++++|.++. .+|. -|-..|
T Consensus 142 gSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e--~G~~~~hkelE~l~A~f~g~e~a--------~vF~-mGf~TN 210 (519)
T KOG1357|consen 142 GSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHE--AGTTEEHKELEELVARFLGVEDA--------IVFS-MGFATN 210 (519)
T ss_pred cccccccccccCCcCChHHHHHHHHhcccccccchh--cccHHHHHHHHHHHHHhcCCcce--------EEEe-cccccc
Confidence 3456778775543333333333322 2222222211 24567778888899999999874 2222 222223
Q ss_pred HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC--
Q 037144 154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE-- 231 (502)
Q Consensus 154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g-- 231 (502)
-+.+-+... ++..|+..+..|.|+.-.|++.|. .++....+ |+.+||+.|++....|
T Consensus 211 s~~~p~l~~-----------~gsLIiSDelNHaSi~~GaRLSgA---tiRVfkHN-------dm~~LEr~Lrd~I~~gqP 269 (519)
T KOG1357|consen 211 SMNIPSLLG-----------KGSLIISDELNHASLITGARLSGA---TTRVFRHN-------DMQGLERLLRDAIVYGQP 269 (519)
T ss_pred ccCcceeec-----------CCcceeeccccchheeccccccCc---eEEEEecC-------CHHHHHHHHHHHHhcCCC
Confidence 222222222 566778888999999999999999 99999865 7889999999876554
Q ss_pred -----CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccC-----ccchhhhcCCCCCCeeEEccCC
Q 037144 232 -----LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIC-----PEFRHFIDGVECVDSFSFNPHK 301 (502)
Q Consensus 232 -----~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~-----~~~~~~~~~~~~aDsi~~~~hK 301 (502)
.+.++|++-.-.++-|.++++.++.+++++|..+|++|+||..+++.- .++. -.+-+.+|.+...+-|
T Consensus 270 ~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~--g~d~~dvDImMGtftK 347 (519)
T KOG1357|consen 270 KTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYF--GVDPEDVDIMMGTFTK 347 (519)
T ss_pred CcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeecc--CCCchhheeecceehh
Confidence 223566666667789999999999999999999999999998887631 1111 1123478899888999
Q ss_pred cCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh----cHHHHHH
Q 037144 302 WLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF----GVANLRN 377 (502)
Q Consensus 302 ~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~----g~~g~~~ 377 (502)
.+++ +|..+..++.. .+.+.....+..... ..+ +.-+-....+++.+ |.++.++
T Consensus 348 Sfga---~GGyiagsk~l-id~lrt~s~~~~yat-----------------~~s-ppvaqq~~ssl~~i~G~dgt~~g~~ 405 (519)
T KOG1357|consen 348 SFGA---AGGYIAGSKEL-IDYLRTPSPSALYAT-----------------SLS-PPVAQQILTSVKHIMGEDGTNRGRQ 405 (519)
T ss_pred hccc---ccceecCcHHH-HhhhccCCCceeecc-----------------cCC-hHHHHHHHHHHHhhcCCCcccHHHH
Confidence 8863 44444434433 333322222211110 001 01122334455543 4566788
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh
Q 037144 378 FIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV 457 (502)
Q Consensus 378 ~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 457 (502)
.+++..+++++|+..+++. ||.+.+...++++..-+.+... +..+.++|.+
T Consensus 406 k~~~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~~~~k----------------------------~~~f~r~~l~ 456 (519)
T KOG1357|consen 406 KIERLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLYGPAK----------------------------IVAFSREMLE 456 (519)
T ss_pred HHHHHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeecCccc----------------------------ccHHHHHHHh
Confidence 9999999999999999987 8999887666666555443311 1233334444
Q ss_pred cCcEE--EEeee-ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 458 SGKVF--MTHAI-VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 458 ~g~~~--~~~~~-~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
++..+ +.++. .--....|+|....+|.| +++++++.+.++.+
T Consensus 457 ~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e-~ld~~l~~i~~~g~ 501 (519)
T KOG1357|consen 457 RNIGVVVVGFPATPLLESRARFCLSASHTKE-DLDRALEVIDRVGD 501 (519)
T ss_pred cCceEEEEeCCCchHHHhHHHhhhcccccHH-HHHHHHHHHhhhch
Confidence 44432 22221 111235799987666655 99999999988754
No 289
>PLN02624 ornithine-delta-aminotransferase
Probab=99.61 E-value=1.6e-12 Score=135.70 Aligned_cols=307 Identities=10% Similarity=0.012 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G 196 (502)
...++.+.|++++|.+ ..+|+++|++||..|+..||.......+....+..+|..+...|-...-+..+.|
T Consensus 118 ~~~~la~~L~~~~~~~---------~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~ 188 (474)
T PLN02624 118 KFPEFAEYLTSMFGYD---------MVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSC 188 (474)
T ss_pred HHHHHHHHHHhhcCCC---------eEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCC
Confidence 3344556666777653 4789999999999999999875322111100012234444334533222222222
Q ss_pred CC---------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhC
Q 037144 197 ID---------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFG 263 (502)
Q Consensus 197 lg---------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g 263 (502)
-. ...+..+|. -|++.|++.++. .+....+|++....+++|.+-| |++|.++|++||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~---~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~g 258 (474)
T PLN02624 189 DNEATRGFGPLLPGHLKVDF-------GDLDALEKIFEE---DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHN 258 (474)
T ss_pred CccccccCCCCCCCceEeCC-------CCHHHHHHHHHh---CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 10 012233332 278999998863 2234567888888889999877 999999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144 264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE 342 (502)
Q Consensus 264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 342 (502)
+++++|.+|.|.......+.....++ ..|.++++ |.++.+ ..+|.++.++ ... ..+... ....
T Consensus 259 illI~DEv~tG~GrtG~~~a~~~~~i-~pDiv~ls--K~lggG~~pigav~~~~-~i~-~~~~~~--~~~~--------- 322 (474)
T PLN02624 259 VLMIADEIQTGLARTGKMLACDWEEV-RPDVVILG--KALGGGVIPVSAVLADK-DVM-LCIKPG--EHGS--------- 322 (474)
T ss_pred CEEEEeccccCcCcCcchhhHHhcCC-CCCEEEec--ccccCCCCcceeeeecH-HHH-hHhccC--CcCC---------
Confidence 99999999976422111111111233 57888874 988766 4678877653 222 122110 0000
Q ss_pred cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CC-eEEecCCCeeEEEEEeecC
Q 037144 343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KR-FEVAFPRNFSLVCFRVTPS 417 (502)
Q Consensus 343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~-~~l~~~~~~~~v~f~~~~~ 417 (502)
++ ++.+.......++++.+..+ ++.++..++.++|++.|+++ |. +.-+ .+...++.+.+...
T Consensus 323 --------T~-~g~pl~~aaa~aaLe~l~~~---~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~v-rg~G~~~~i~l~~~ 389 (474)
T PLN02624 323 --------TF-GGNPLASAVAMAALQVVQDE---KLAERSAKLGQELRDQLQKIQKQFPKLIKEV-RGRGLLNAVVLNSP 389 (474)
T ss_pred --------CC-CCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-EeeEEEEEEEecCC
Confidence 00 11111222333444443222 34455666677777766553 32 2212 12233444444221
Q ss_pred cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144 418 AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~ 497 (502)
.. . .....++.+.|.++|.+ +.+. +..+||++.. ...++++|+++++.|++
T Consensus 390 ~~--------------------~----~~~a~~~~~~L~e~GV~-v~p~---~~~~lR~~p~-l~~t~e~id~~l~~L~~ 440 (474)
T PLN02624 390 KL--------------------G----PVSAYDVCLKLKERGLL-AKPT---HDTIIRLAPP-LSISEDELQECSKALSD 440 (474)
T ss_pred Cc--------------------C----hHHHHHHHHHHHhCCeE-EecC---CCCEEEEECC-ccCCHHHHHHHHHHHHH
Confidence 00 0 12235677778778864 4332 3568999974 45677899999999988
Q ss_pred HHH
Q 037144 498 HLE 500 (502)
Q Consensus 498 ~~~ 500 (502)
+.+
T Consensus 441 ~l~ 443 (474)
T PLN02624 441 VLE 443 (474)
T ss_pred HHH
Confidence 765
No 290
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.61 E-value=2.5e-13 Score=131.23 Aligned_cols=255 Identities=13% Similarity=0.077 Sum_probs=171.7
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeC---CCC
Q 037144 108 WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS---DQT 184 (502)
Q Consensus 108 ~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s---~~~ 184 (502)
|....-..++|..+++..+++||++-. -+=..||+.||+.+..+..+ |++.|+.- .-+
T Consensus 64 YgGce~VD~vE~laierak~LFga~~a--------nVQPhSGs~AN~av~~All~-----------pGDtimgm~l~~GG 124 (413)
T COG0112 64 YGGCEYVDEVEELAIERAKKLFGAEYA--------NVQPHSGSQANQAVYLALLQ-----------PGDTIMGLDLSHGG 124 (413)
T ss_pred cCCCeeHHHHHHHHHHHHHHHhCCCcc--------ccCCCCchHHHHHHHHHHcC-----------CCCeEecccCCCCC
Confidence 455566789999999999999998743 13345789999877666554 66666643 334
Q ss_pred chhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCC
Q 037144 185 HCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI 264 (502)
Q Consensus 185 H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~ 264 (502)
|.+.-.-....|.- =+++..++|.+ ++.+|.|++++.+.+.+ |.+|++ |.+..-..-|++++.+||++.|+
T Consensus 125 HltHg~~v~~sG~~-~~~v~Y~vd~e-t~~IDyD~~~k~a~e~k-----PK~ii~--G~SaY~r~id~~~~reIad~VGA 195 (413)
T COG0112 125 HLTHGSPVNFSGKL-FNVVSYGVDPE-TGLIDYDEVEKLAKEVK-----PKLIIA--GGSAYSRPIDFKRFREIADEVGA 195 (413)
T ss_pred cccCCCCCCcccee-EEeEecccccc-cCccCHHHHHHHHHHhC-----CCEEEE--CccccccccCHHHHHHHHHHhCc
Confidence 54444222333331 05666677753 68999999999987753 666654 55566677899999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144 265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE 344 (502)
Q Consensus 265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 344 (502)
+|.+|.||-.+......+.. -++.||++|.+.||+|.+|. .|++++++.+...... .. ++.
T Consensus 196 ~L~~DmAHiaGLVA~G~~p~---P~~~AdvVTtTTHKTlrGPr-GG~Il~~~eel~kkin-~a---VFP----------- 256 (413)
T COG0112 196 YLMVDMAHVAGLIAGGVHPN---PLPHADVVTTTTHKTLRGPR-GGIILTNDEELAKKIN-SA---VFP----------- 256 (413)
T ss_pred eEEehHHHHHHHHhcccCCC---CCCccceEeCCcccCCCCCC-ceEEEeccHHHHHHhh-hh---cCC-----------
Confidence 99999999766654433332 24489999999999999996 5677777644332211 11 111
Q ss_pred cCCCcccccCCCCCC-chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeec
Q 037144 345 VGYKDWQITLCRRFR-SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTP 416 (502)
Q Consensus 345 ~~~~~~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~ 416 (502)
+.+++-... ..+...+++.....++++..++..++|+.|.+.|.+. |+.++.- .+..++.+.+.+
T Consensus 257 ------g~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~~ 323 (413)
T COG0112 257 ------GLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVLVDLRS 323 (413)
T ss_pred ------ccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEEEEccc
Confidence 111111111 2233455665567788999999999999999999996 8999852 234455555543
No 291
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.61 E-value=7.6e-13 Score=135.15 Aligned_cols=308 Identities=12% Similarity=0.028 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
.+.+.++.+++++..+.+ ..+|++||++||..|+..+|.... + +.. .+..+|......|-+..-++..
T Consensus 77 ~~~~~~la~~l~~~~~~~---------~v~f~~SGseA~e~Aik~ar~~~~-~-~~~-~r~~ii~~~~~yHG~t~~~~~~ 144 (395)
T PRK03715 77 NEPMAKLAGLLTQHSCFD---------KVFFANSGAEANEGAIKLARKWGR-K-HKN-GAYEIITFDHSFHGRTLATMSA 144 (395)
T ss_pred CHHHHHHHHHHhhccCCC---------EEEEeCCcHHHHHHHHHHHHHHhh-c-cCC-CCcEEEEECCCcCCChHHHHhh
Confidence 556777788888765432 479999999999999999986421 1 101 1244566666678887777766
Q ss_pred cCCCCCCEEEEecCCCC--CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCEEEe
Q 037144 195 VGIDRKNIRAIKTTKSS--SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 195 ~Glg~~~v~~v~~~~~~--~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~lhV 268 (502)
.|...-.....|...+- .-..|+++|++.+.+. ..+|++.......|.+-| +++|.++|++||+++++
T Consensus 145 s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~ 218 (395)
T PRK03715 145 SGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDK------TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIV 218 (395)
T ss_pred cCCcccccCCCCCCCCceeeCCchHHHHHHHcCCC------ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 65411011111111100 0024788999888532 347777777777888877 99999999999999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCC
Q 037144 269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYK 348 (502)
Q Consensus 269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 348 (502)
|.++.|+.-...-+.....++ ..|.++++ |.++..++.|.++.+++-. .+ .+.+..+
T Consensus 219 DEv~tG~GRtG~~~a~~~~gv-~PDi~t~g--K~lg~G~p~~av~~~~~i~---~~--~~~~~~~--------------- 275 (395)
T PRK03715 219 DEVQTGCGRTGTLFAYELSGI-EPDIMTLG--KGIGGGVPLAALLAKAEVA---VF--EAGDQGG--------------- 275 (395)
T ss_pred eccccCCCCCcchhhHhhcCC-CCceeeeh--hhhhCCcceEEEEEccccc---cc--cCCCcCC---------------
Confidence 999986422211111111233 57887775 9998767788887765421 11 1111110
Q ss_pred cccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCeeEEEEEeecCcchhhhhh
Q 037144 349 DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVAFPRNFSLVCFRVTPSAVMDKLRT 425 (502)
Q Consensus 349 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~~~~~~~~v~f~~~~~~~~~~~~~ 425 (502)
|+ .+.+..+....+++..+.. .+++++..++.++|++.|+++ .++.-+ .-...++.+.+....
T Consensus 276 --T~-~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~v-rG~Glm~~i~l~~~~------- 341 (395)
T PRK03715 276 --TY-NGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGE-RGEGLLRALLLGKDI------- 341 (395)
T ss_pred --CC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeE-EcceeEEEEEecCch-------
Confidence 11 1112233344455555532 356778888888888888753 123212 122344555543210
Q ss_pred cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.....+...++.++|.+. ... +...||++.. ...++++|+++++.|+++.++
T Consensus 342 -------------------~~~~~~~~~~~~~~Gi~~-~~~---~~~~lR~~p~-l~~t~~ei~~~~~~l~~~l~~ 393 (395)
T PRK03715 342 -------------------GPQIVEKARDMQPDGLLL-NAP---RPNLLRFMPA-LNVTTEEIDQMIAMLRSVLDK 393 (395)
T ss_pred -------------------HHHHHHHHHhccCCCEEE-eec---CCCEEEEeCC-cccCHHHHHHHHHHHHHHHHh
Confidence 011112223333447543 221 2357999975 557777999999999988765
No 292
>PRK07049 methionine gamma-lyase; Validated
Probab=99.60 E-value=6.5e-13 Score=136.77 Aligned_cols=225 Identities=12% Similarity=0.106 Sum_probs=153.8
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|....+|+. ++++.|.+ ..++++||+.|+..++.+..+ +++.|+++...+....
T Consensus 81 ~~Pt~~~Le~~----lA~leg~~---------~~iv~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~p~Y~~~~ 136 (427)
T PRK07049 81 NHPNSEIVEDR----LAVYEGAE---------SAALFSSGMSAIATTLLAFVR-----------PGDVILHSQPLYGGTE 136 (427)
T ss_pred CCcCHHHHHHH----HHHHhCCC---------cEEEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCCcccHH
Confidence 34555666655 66777744 468899999887766655543 6778888888887665
Q ss_pred HH----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH----
Q 037144 190 KA----AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ---- 261 (502)
Q Consensus 190 ~a----a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~---- 261 (502)
.. +...|+ +++.++. ..|+++|+++|.+..++ ..+.+|++..++|++|.+-|+++|.+++++
T Consensus 137 ~~~~~~l~~~Gi---~~v~~~~------~~d~~~l~~~l~~~~~~-~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~ 206 (427)
T PRK07049 137 TLLAKTFRNFGV---GAVGFAD------GLSEAAIGAAAEAAAAK-GRVSLILIETPANPTNSLVDVAAVRRVADAIEAR 206 (427)
T ss_pred HHHHHHHHhcCc---EEEEEeC------CCCHHHHHHHHHhhccC-CCceEEEEECCCCCCCcccCHHHHHHHHHHhhhc
Confidence 54 345687 7777762 25788899888654322 134588888999999999999999999988
Q ss_pred --hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCC-C-CcceEEEeeCchhhhhhhcCCcccccCccCC
Q 037144 262 --FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT-T-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATD 337 (502)
Q Consensus 262 --~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~-p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~ 337 (502)
++++++||.+|.+.....| .. .++|.++.+++|++++ + ...|++ +.++.... .+......+
T Consensus 207 ~~~~~~vvvDety~~~~~~~p-l~------~g~divv~S~SK~~gG~~glr~G~v-v~~~~l~~-~l~~~~~~~------ 271 (427)
T PRK07049 207 QGHRPIIACDNTLLGPVFQKP-LE------HGADLSVYSLTKYVGGHSDLVAGAV-LGRKALIR-QVRALRSAI------ 271 (427)
T ss_pred ccCCCEEEEECCccccccCCc-cc------cCCCEEEEcCceeecCCCCcEEEEE-ECCHHHHH-HHHHHHHhc------
Confidence 8999999999876543221 11 1689999999999984 3 234544 44444322 221110111
Q ss_pred CCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 338 QEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 338 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
+.....+..|++++.+ +.+..++++..++++.+.+.|+++|+++-+
T Consensus 272 -----------------g~~ls~~~a~l~~r~L--~tl~~R~~~~~~~a~~la~~L~~~p~V~~v 317 (427)
T PRK07049 272 -----------------GTQLDPHSCWMLGRSL--ETLVLRMERANRNARAVAEFLRDHPKVEKL 317 (427)
T ss_pred -----------------CCCCCHHHHHHHHcCC--ChHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 1112456677777655 567888899999999999999999987643
No 293
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.59 E-value=9.7e-13 Score=131.58 Aligned_cols=269 Identities=11% Similarity=0.012 Sum_probs=168.1
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR 199 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~ 199 (502)
.+++.+++.+|.+ ..++|+|+++++...+. + . +++.|++..+++..+...++.+|+
T Consensus 53 ~Lr~~ia~~~~~~---------~I~it~Gs~~al~~~~~-~-~-----------~gd~v~v~~P~y~~~~~~~~~~g~-- 108 (330)
T PRK05664 53 GLEAAARAYYGAP---------QLLPVAGSQAAIQALPR-L-R-----------APGRVGVLSPCYAEHAHAWRRAGH-- 108 (330)
T ss_pred HHHHHHHHHhCCC---------CEEECcCHHHHHHHHHH-c-c-----------CCCEEEEcCCChHHHHHHHHHcCC--
Confidence 3456677777753 48899999988755432 1 1 677888999999999999999999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeeccccccc
Q 037144 200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSA 276 (502)
Q Consensus 200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~ 276 (502)
+++.||++ +++++++ .+ .+|+.+.++|+||.+-+ +++|+++|+++|+++++|.+|..+.
T Consensus 109 -~~~~v~~~----------~~~~~~~-~~------~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~ 170 (330)
T PRK05664 109 -QVRELDEA----------EVEAALD-SL------DVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNT 170 (330)
T ss_pred -eEEEechh----------hHhhhhc-CC------CEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCC
Confidence 99988763 3444443 11 25777889999999965 5666667789999999999996442
Q ss_pred ccCccchhhhcCCCCC-C-eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144 277 CICPEFRHFIDGVECV-D-SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT 353 (502)
Q Consensus 277 ~~~~~~~~~~~~~~~a-D-si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 353 (502)
..+... .+..- . .++.+++|.++ ....+|+++. ++............+.
T Consensus 171 -~~~s~~----~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~-~~~l~~~~~~~~~~~~---------------------- 222 (330)
T PRK05664 171 -PQHSLA----ACAHRPGLIVLRSFGKFFGLAGARLGFVLA-EPALLRALAELLGPWT---------------------- 222 (330)
T ss_pred -Cccccc----ccccCCCEEEEeeccccccCCCcceEEEEe-CHHHHHHHHHhcCCCC----------------------
Confidence 111111 11122 2 45667999997 5567788776 3433322211111110
Q ss_pred CCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144 354 LCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTY 432 (502)
Q Consensus 354 ~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 432 (502)
...+..+++...+. .+..+...++..+.++++.+.|++. +++.. ......+.++. +.
T Consensus 223 ----~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~-~~~~~f~~~~~-~~--------------- 280 (330)
T PRK05664 223 ----VSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH-GLTPA-GGCALFQWVRT-ED--------------- 280 (330)
T ss_pred ----CCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCcceEEEEec-CC---------------
Confidence 01222233333332 2344566777788889999999887 55421 11122333332 21
Q ss_pred ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..++.+.+.++|..+.. +....++|++++. +.++++++.++|+++.++
T Consensus 281 ---------------~~~~~~~l~~~gi~v~~---f~~~~~iRis~~~---~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 281 ---------------AAALHEFLARRGILTRL---FEQPASLRFGLPA---DEADWARLDQALLAYRKE 328 (330)
T ss_pred ---------------HHHHHHHHHHCCeEEEE---CCCCCeEEEECCC---CHHHHHHHHHHHHHHHhh
Confidence 24566777777876532 2344689999863 456899999999887653
No 294
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.59 E-value=1.2e-12 Score=134.61 Aligned_cols=299 Identities=12% Similarity=0.042 Sum_probs=168.8
Q ss_pred HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCC
Q 037144 119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID 198 (502)
Q Consensus 119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg 198 (502)
.++.+.|+++++.+ ..+|++||++||..|+..||.....+ +..+ +..++......|-+..-+..+.|-.
T Consensus 84 ~~la~~l~~~~~~~---------~v~~~~sGseA~e~Alk~ar~~~~~~-~~~~-r~~ii~~~~~yHG~t~~~~~~~~~~ 152 (406)
T PRK12381 84 LRLAKKLIDATFAD---------RVFFCNSGAEANEAALKLARKYAHDR-YGSH-KSGIVAFKNAFHGRTLFTVSAGGQP 152 (406)
T ss_pred HHHHHHHHhhCCCC---------eEEEcCCcHHHHHHHHHHHHHHHhhc-CCCC-CCeEEEECCCcCCcchhHHhhcCCc
Confidence 34556666766542 47999999999999999998753211 1000 2334445555666555444444321
Q ss_pred C---------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc-----cCChhHHHHHHHHhCC
Q 037144 199 R---------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA-----VDPLKPLCDVAKQFGI 264 (502)
Q Consensus 199 ~---------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~-----idpl~eI~~i~~~~g~ 264 (502)
. ..+..+| ..|+++|++.+.++ +.+|++.. ...+|. .+.+++|.++|++||+
T Consensus 153 ~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~------~aaviiEP-v~~~gg~~~~~~~~l~~l~~l~~~~~~ 218 (406)
T PRK12381 153 KYSQDFAPLPPDIRHAA-------YNDLNSASALIDDQ------TCAVIVEP-IQGEGGVIPADKAFLQGLRELCDRHNA 218 (406)
T ss_pred ccccCCCCCCCCeeEeC-------CCCHHHHHHhccCC------eeEEEEeC-CcCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 0 0122222 23789999888542 33566654 444443 3679999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144 265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE 344 (502)
Q Consensus 265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 344 (502)
++++|.+|.+.......+.....++ ..|.++ ..|.++..+..|.++.++. . .+.+... ...
T Consensus 219 llI~DEv~tG~gr~G~~~~~~~~~v-~pDi~t--~sK~l~gG~~ig~~~~~~~-~-~~~~~~~---~~~----------- 279 (406)
T PRK12381 219 LLIFDEVQTGVGRTGELYAYMHYGV-TPDVLT--TAKALGGGFPIGAMLTTEK-C-ASVMTVG---THG----------- 279 (406)
T ss_pred EEEEcchhhCCCCCcchhhhHhhCC-CCCEEE--ehhhhhCCCceEEEEEcHH-H-HhhcCCC---CCC-----------
Confidence 9999999966532221111111233 367654 4699976677888877543 2 2222211 000
Q ss_pred cCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC-C-eeEEEEEeecCcchh
Q 037144 345 VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAFPR-N-FSLVCFRVTPSAVMD 421 (502)
Q Consensus 345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~~~-~-~~~v~f~~~~~~~~~ 421 (502)
.++ ++.+.....+.++++.+. -.++.++..++.++|.+.|+++. .+.++... . ..++.+.+.+..
T Consensus 280 -----~t~-~~~pl~~aaa~a~l~~l~---~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~--- 347 (406)
T PRK12381 280 -----TTY-GGNPLASAVAGKVLELIN---TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEY--- 347 (406)
T ss_pred -----CCC-CCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCch---
Confidence 001 111222233334444442 23567788888899988887751 12222111 1 223344332210
Q ss_pred hhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 422 KLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
......+.+.+.++|.++. + .+..++|+++. ...++++|+++++.|.++.++
T Consensus 348 -----------------------~~~~~~~~~~l~~~Gv~v~-~---~g~~~lRl~p~-~~~t~~~i~~~~~~l~~~l~~ 399 (406)
T PRK12381 348 -----------------------AGKAKQISQEAAKAGVMVL-I---AGPNVVRFAPA-LNISEEEITTGLDRFARACER 399 (406)
T ss_pred -----------------------hhHHHHHHHHHHHCCcEEe-e---CCCCEEEEeCC-ccCCHHHHHHHHHHHHHHHHH
Confidence 1124567788888897543 2 13458999975 335677999999999887654
No 295
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.58 E-value=1e-12 Score=131.78 Aligned_cols=272 Identities=11% Similarity=0.032 Sum_probs=169.8
Q ss_pred HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCC
Q 037144 119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGID 198 (502)
Q Consensus 119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg 198 (502)
.++++++++.+|.++.. ..++|+|+++++. .+..+.. ++. |++..+++..+..+++..|+
T Consensus 56 ~~L~~~ia~~~~~~~~~------~I~i~~Gs~e~i~-~l~~~~~-----------~g~-v~v~~P~y~~y~~~~~~~g~- 115 (339)
T PRK06959 56 DGLAACAARYYGAPDAA------HVLPVAGSQAAIR-ALPALLP-----------RGR-VGIAPLAYSEYAPAFARHGH- 115 (339)
T ss_pred HHHHHHHHHHhCCCCcc------cEEECcCHHHHHH-HHHHhcC-----------CCe-EEEcCCCcHHHHHHHHHCCC-
Confidence 46778899999997421 5888998888764 3322211 444 55677888889999999999
Q ss_pred CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHH---HHHhCCEEEeecccccc
Q 037144 199 RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDV---AKQFGIWVHVDAAYAGS 275 (502)
Q Consensus 199 ~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i---~~~~g~~lhVDaA~g~~ 275 (502)
+++.+|.+. +.+++ .. .+|+++.++|+||.+-+.+++.++ |++++.|+++|.+|..+
T Consensus 116 --~~~~v~~~~--------~~~~~----~~------~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~ 175 (339)
T PRK06959 116 --RVVPLDEAA--------DTLPA----AL------THLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADT 175 (339)
T ss_pred --EEEeecccc--------hhccc----cC------CEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccC
Confidence 888887652 12211 11 167888899999999766665554 56789999999999765
Q ss_pred cccCccchhhhcCCCCCC-eeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144 276 ACICPEFRHFIDGVECVD-SFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT 353 (502)
Q Consensus 276 ~~~~~~~~~~~~~~~~aD-si~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 353 (502)
... +...... ..-. .+.-++.|.++ ....+|+++.. +............| .
T Consensus 176 ~~~-~s~~~~~---~~~~vi~l~SfSK~~gl~GlRiGy~v~~-~~li~~l~~~~~~~--------------------~-- 228 (339)
T PRK06959 176 LPA-ASLAAHT---DRPGLVVLRSVGKFFGLAGVRAGFVLAA-PALLAALRDALGAW--------------------T-- 228 (339)
T ss_pred CCc-ccchhcc---CCCCEEEEecChhhcCCcchheEEEecC-HHHHHHHHHhcCCC--------------------C--
Confidence 321 2111111 1112 45567999997 55677887763 43332221111111 0
Q ss_pred CCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144 354 LCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTY 432 (502)
Q Consensus 354 ~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 432 (502)
...+...++...+. .+..++..++..+.++++.+.|+++ ++++. +..+.+.++. +.
T Consensus 229 ----vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~f~~~~~-~~--------------- 285 (339)
T PRK06959 229 ----VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH-GFAVH--ATPLFSWTDD-PR--------------- 285 (339)
T ss_pred ----CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcc--CcceEEEEeC-CC---------------
Confidence 02233334444442 3445666778888899999999987 67664 2222333332 11
Q ss_pred ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..++.+.|.++|..+- . +....++|++++ .+.+++++++++|+++.+.
T Consensus 286 ---------------~~~l~~~l~~~GI~vr-~--~~~~~~lRisi~---~~~~e~~~l~~al~~~~~~ 333 (339)
T PRK06959 286 ---------------AAALHAALARRGIWTR-Y--FAPPPSVRFGLP---ADEAEWQRLEDALAECVPT 333 (339)
T ss_pred ---------------HHHHHHHHHhCCeEEE-E--CCCCCeEEEECC---CCHHHHHHHHHHHHHHHHH
Confidence 2457777888887543 2 233458999974 2456999999999887653
No 296
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=99.57 E-value=5.8e-14 Score=137.48 Aligned_cols=265 Identities=18% Similarity=0.253 Sum_probs=183.5
Q ss_pred hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH----hCcc---CCCCeEEEeCCCCch
Q 037144 114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK----IGRE---NISKLVVYSSDQTHC 186 (502)
Q Consensus 114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~----~~~~---~~~~~~v~~s~~~H~ 186 (502)
+.-+.-.+..|+..+|.+.++..|.......|...-..++..++..|....+.. .|+. ....+++|+|+..|.
T Consensus 163 an~i~Gdanh~fgnLF~FAdsqiycsdPaasfhadiadai~haVkLAikar~~~dhs~eG~~afaa~aaPt~YiS~alh~ 242 (838)
T KOG0630|consen 163 ANSISGDANHVFGNLFHFADSQIYCSDPAASFHADIADAIGHAVKLAIKARCGGDHSLEGGIAFAALAAPTFYISEALHM 242 (838)
T ss_pred HHhhccchHHHHHHHHhhcccccccCCchhhhhhhhhhHHHHHHHhhhhhccCCccccccccchHhhcCceEEEcccccH
Confidence 334455677889999998765444333333444333344445554443322211 0100 125689999999998
Q ss_pred hH-HHHHHHcCCCCCCEEEEecCCCC--CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC
Q 037144 187 AF-QKAAQIVGIDRKNIRAIKTTKSS--SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG 263 (502)
Q Consensus 187 s~-~~aa~~~Glg~~~v~~v~~~~~~--~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g 263 (502)
-. ..+|+.+|+.-..+..++-...+ .|+||.-.+++.|+++..+|++|+++++..|++..|..|-|-.|.++|++++
T Consensus 243 ~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eaha 322 (838)
T KOG0630|consen 243 DLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHA 322 (838)
T ss_pred HHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhh
Confidence 54 55889999944333333321111 3699999999999999999999999999999999999999999999999997
Q ss_pred -CEEEeecccccccccCccchhhhc-CCCCCCeeEEccCCcCCCCCcceEEEeeCchhh-hhhhcCCcccccCccCCCCC
Q 037144 264 -IWVHVDAAYAGSACICPEFRHFID-GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCL-LSTLSTNPQYLKNEATDQEP 340 (502)
Q Consensus 264 -~~lhVDaA~g~~~~~~~~~~~~~~-~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l-~~~~~~~~~yl~~~~~~~~~ 340 (502)
+|+|.-| ++..++.|.+....+- -.+..||++++.--|++.|..--+++-|.-+-. ..+|..
T Consensus 323 kfWLHasG-haiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPleg~aaSafes-------------- 387 (838)
T KOG0630|consen 323 KFWLHASG-HAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLEGSAASAFES-------------- 387 (838)
T ss_pred heeEeecc-chhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeecccccccchhccc--------------
Confidence 9999986 4444454543222211 134789999999999999965444443322110 001111
Q ss_pred cccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144 341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF 403 (502)
Q Consensus 341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~ 403 (502)
-.-.+++..++.+|.+++++|...+.++++....+.+.+.+.+.+.+++++++
T Consensus 388 ----------dpi~rekLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig 440 (838)
T KOG0630|consen 388 ----------DPILREKLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIG 440 (838)
T ss_pred ----------ChHHHHhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEec
Confidence 11145667999999999999999999999999999999999999999999975
No 297
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.57 E-value=6.9e-12 Score=129.67 Aligned_cols=319 Identities=8% Similarity=-0.022 Sum_probs=174.5
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+.+.++.+.|.+++.-.. ...+|+++||+|+..|++.||.....+ +..+ +.-+|......|-...-+....
T Consensus 85 ~~~~~la~~l~~~~p~~~-------~~v~f~~sGseA~e~A~klar~~~~~~-~~~~-r~~ii~~~~~yHG~t~~~ls~~ 155 (423)
T PRK05964 85 EPAERLAQRLVALTPGGL-------DHVFFSDSGSVAVEVALKMALQYWRNR-GEPG-RSRFLSLRGGYHGDTIGTMSVG 155 (423)
T ss_pred HHHHHHHHHHHHhCCCCC-------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEEcCCcCCccHHHHhcC
Confidence 445567777888763111 157999999999999999999753222 1111 2234444444554332222222
Q ss_pred CCC---------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec-CCccccccC----ChhHHHHHHHH
Q 037144 196 GID---------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV-GTTAITAVD----PLKPLCDVAKQ 261 (502)
Q Consensus 196 Glg---------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt~~G~id----pl~eI~~i~~~ 261 (502)
+-+ ...+..+|....+....++++|++.+.+. +..+.+|++.. .....|.+- .+++|.++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~---~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~ 232 (423)
T PRK05964 156 DRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKH---AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDR 232 (423)
T ss_pred CCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC---CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHH
Confidence 210 01234444432111122378888888642 22344555544 244456553 49999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCC---cccccCccCC
Q 037144 262 FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTN---PQYLKNEATD 337 (502)
Q Consensus 262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~---~~yl~~~~~~ 337 (502)
||+++++|.++.|+.....-+.....++ ..|.++++ |+++.+ .+.|.++.++ +. .+.+... ..++...
T Consensus 233 ~g~llI~DEv~tg~gr~G~~~a~~~~~v-~pDi~~~~--K~l~gG~~p~~av~~~~-~i-~~~~~~~~~~~~~~~~~--- 304 (423)
T PRK05964 233 HGVLLIFDEIATGFGRTGTLFACEQAGV-SPDIMCLS--KGLTGGYLPLAATLCTA-EI-FEAFYSDDRAKAFMHSP--- 304 (423)
T ss_pred cCCEEEEechhhCCCcCcchhHHHhcCC-CCCeeeee--hhhhcCcccceEEEEcH-HH-HHhhhcCCcccccccCC---
Confidence 9999999999966532211111111233 57877765 999776 5678876643 32 2233211 0111100
Q ss_pred CCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEEEEee
Q 037144 338 QEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP--RNFSLVCFRVT 415 (502)
Q Consensus 338 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~~~~~v~f~~~ 415 (502)
|+ .+.+....+..++++.+.. ....++..++.+++++.|+++.++..+.. ....++.+.+.
T Consensus 305 -------------T~-~~np~~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~ 367 (423)
T PRK05964 305 -------------SY-TANPLACAAANASLDLFED---EPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELD 367 (423)
T ss_pred -------------CC-CcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEec
Confidence 00 1111122233344444322 23567777888888888876533322211 22344555553
Q ss_pred cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144 416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV 495 (502)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l 495 (502)
... . .+....+.+.+.++|.++ .+. + ..+|++.. ...+++|||++++++
T Consensus 368 ~~~----------------------~---~~~~~~l~~~l~~~Gv~v-~~~---~-~~lR~~p~-l~~t~edId~~v~~l 416 (423)
T PRK05964 368 RPV----------------------L---ERDGPALRAFALERGVLL-RPL---G-NTIYLMPP-YIITAEELDRITDAI 416 (423)
T ss_pred cCc----------------------c---hhHHHHHHHHHHHCCeEE-Eec---C-CEEEEeCC-cccCHHHHHHHHHHH
Confidence 321 0 123456778888889654 331 1 47999864 456777999999999
Q ss_pred HHHHHhC
Q 037144 496 QEHLEAF 502 (502)
Q Consensus 496 ~~~~~~~ 502 (502)
+++.+++
T Consensus 417 ~~al~~~ 423 (423)
T PRK05964 417 VEVADEL 423 (423)
T ss_pred HHHHhhC
Confidence 9988764
No 298
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.56 E-value=5.8e-12 Score=130.61 Aligned_cols=310 Identities=10% Similarity=0.030 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+...++.+.|++++.-+.. ..+|++|||+||-.|+..||...-++ + +..+|......|-...-+....
T Consensus 124 ~~~~~lae~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~t~~~----g-r~~ii~~~~~yHG~t~~~ls~~ 191 (459)
T PRK11522 124 PLRAMLAKTLAALTPGKLK-------YSFFCNSGTESVEAALKLAKAYQSPR----G-KFTFIATSGAFHGKSLGALSAT 191 (459)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEeCCchHHHHHHHHHHHHHhccC----C-CcEEEEecCCCCCCcHHHhhhc
Confidence 3445566777777532211 47999999999999999998753110 1 1223333334454333333333
Q ss_pred CCC---------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHh
Q 037144 196 GID---------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQF 262 (502)
Q Consensus 196 Glg---------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~ 262 (502)
|-. ...+..+|. -|.+++++++++..+.+..+.+|++.......|.+-| ++++.++|++|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~ 264 (459)
T PRK11522 192 AKSTFRKPFMPLLPGFRHVPF-------GNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEF 264 (459)
T ss_pred CCcccccCCCCCCCCCcccCC-------CCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHc
Confidence 321 001222222 1788999988754333445667777777777788877 99999999999
Q ss_pred CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144 263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK 341 (502)
Q Consensus 263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 341 (502)
|+.+++|.++.|+.....-+..-..++ ..|.+++ .|.++.. ++.|.++.++. .. +.+... ++....
T Consensus 265 g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~--gK~lggG~~Pigav~~~~~-i~-~~~~~~-~~~~~~------- 331 (459)
T PRK11522 265 GALLILDEVQTGMGRTGKMFACEHENV-QPDILCL--AKALGGGVMPIGATIATEE-VF-SVLFDN-PFLHTT------- 331 (459)
T ss_pred CCEEEeccceecCCccchhhhhhccCC-CCCEEEe--chhhhCCCccceeEEEcHH-HH-HHhccC-CcccCC-------
Confidence 999999999976422211111111234 4788766 5998765 35788887643 22 222211 121110
Q ss_pred ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeE-EecC--CCeeEEEEEeecC
Q 037144 342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFE-VAFP--RNFSLVCFRVTPS 417 (502)
Q Consensus 342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~-l~~~--~~~~~v~f~~~~~ 417 (502)
|+ .+.+..+.+..++++.+-.+ .+.++..++.++|++.|+++. .+. ++.. -...++.+.+...
T Consensus 332 ---------T~-~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~ 398 (459)
T PRK11522 332 ---------TF-GGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN 398 (459)
T ss_pred ---------CC-CCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc
Confidence 00 11122233444556555433 456778888888888887641 121 1111 1233445544321
Q ss_pred cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144 418 AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~ 497 (502)
+....+.+.+.++|.+ +.+. ..+..++|++.. ...+++|||++++++.+
T Consensus 399 ----------------------------~~~~~i~~~l~~~Gvl-~~~~-~~~~~~lr~~Pp-l~~t~~~id~~l~~l~~ 447 (459)
T PRK11522 399 ----------------------------EIGYNFASEMFRQRVL-VAGT-LNNAKTIRIEPP-LTLTIEQCEQVLKAARK 447 (459)
T ss_pred ----------------------------hHHHHHHHHHHHCCeE-EEec-CCCCCEEEEECC-ccCCHHHHHHHHHHHHH
Confidence 2245677788888864 3332 223468999875 44677799999999988
Q ss_pred HHHh
Q 037144 498 HLEA 501 (502)
Q Consensus 498 ~~~~ 501 (502)
++++
T Consensus 448 ~l~~ 451 (459)
T PRK11522 448 ALAA 451 (459)
T ss_pred HHHH
Confidence 7653
No 299
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.54 E-value=3.6e-13 Score=131.84 Aligned_cols=319 Identities=14% Similarity=0.082 Sum_probs=196.8
Q ss_pred hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCch-HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH
Q 037144 113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTC-EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA 191 (502)
Q Consensus 113 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt-~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 191 (502)
....+-..+...+-+..|++... ..++++.+| +++.+.+.+.|.+ + ....|+.+...|+|-.++
T Consensus 53 ~~~~ltn~l~~d~~~~~G~~~~~------~~~~vP~atgm~l~l~l~~l~~r--~-------~a~~Viw~ridqkSc~ka 117 (389)
T PF05889_consen 53 LLAKLTNSLVLDALRLAGLRSVK------SCFVVPMATGMSLTLCLLALRMR--P-------KAKYVIWPRIDQKSCFKA 117 (389)
T ss_dssp HHHHHHHHHHHHHHHHTTHTTHC------EEEEESS-HHHHHHHHHHHHHHH--C-------T--EEEEEEEETHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcccc------ceEEEecccccHHHHHHHHHhcc--c-------CCceEEEeeccccchHHH
Confidence 34556666777777888987542 467777776 5666666666522 1 345667788999999999
Q ss_pred HHHcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-CChhHHHHHHHHhCCEEEee
Q 037144 192 AQIVGIDRKNIRAIKTTK-SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-DPLKPLCDVAKQFGIWVHVD 269 (502)
Q Consensus 192 a~~~Glg~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-dpl~eI~~i~~~~g~~lhVD 269 (502)
+...|+ +++.||... ++....|.+.+|+++++. |..+.+.+.|..+-..|.. |++++|+++|++||+.++|.
T Consensus 118 i~~AGl---~~~vV~~~~~~d~l~td~~~ie~~i~~~---G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvN 191 (389)
T PF05889_consen 118 IERAGL---EPVVVENVLEGDELITDLEAIEAKIEEL---GADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVN 191 (389)
T ss_dssp HHHTT----EEEEE-EEEETTEEEEHHHHHHHHHHHH---CGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEE
T ss_pred HHhcCC---eEEEeeccCCCCeeeccHHHHHHHHHHh---CCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEc
Confidence 999999 999999632 234677899999999553 4446788888877777777 55999999999999999999
Q ss_pred cccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCc
Q 037144 270 AAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKD 349 (502)
Q Consensus 270 aA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 349 (502)
+|||...-.+-..-.......+.|.++-+.-|.|.+|-|.+.+...++..+... + ..|-....
T Consensus 192 nAYgvQ~~~~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~v-s--~~YpGRas-------------- 254 (389)
T PF05889_consen 192 NAYGVQSSKCMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAV-S--KEYPGRAS-------------- 254 (389)
T ss_dssp GTTTTT-HHHHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHH-H--HTSHSHBT--------------
T ss_pred cchhhhHHHHHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHHHHH-H--HHhhhhhh--------------
Confidence 999774321100000000123789999999999999999999888776544321 1 12221100
Q ss_pred ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCee-EEEEEeecCcchhhhhh
Q 037144 350 WQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVAFPRNFS-LVCFRVTPSAVMDKLRT 425 (502)
Q Consensus 350 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~~~~~~~-~v~f~~~~~~~~~~~~~ 425 (502)
+...+-+...+..+|..|+...+....++-.++.++|++. -+-.+...|.-. .+.|...... .
T Consensus 255 -------~sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~--~---- 321 (389)
T PF05889_consen 255 -------ASPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLY--E---- 321 (389)
T ss_dssp -------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCC--T----
T ss_pred -------cccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccch--h----
Confidence 0123556778888999999999999999999998888542 143444333322 2334332210 0
Q ss_pred cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE---EEEeeeECC--------EEEEEEEecCCCCcHHHHHHHHHH
Q 037144 426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV---FMTHAIVGG--------IYVLRFAAGNSMTMESHVRAAWTV 494 (502)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~~~g--------~~~lR~~~~~~~t~~~di~~~~~~ 494 (502)
... .....|...|..+|.. .+.+..-.. ..+|-++- ....++||||.+++.
T Consensus 322 -------------~~~----k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~As-aiG~~~eevd~~v~r 383 (389)
T PF05889_consen 322 -------------ISQ----KDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAAS-AIGMTREEVDYFVKR 383 (389)
T ss_dssp -------------CCS----SHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE--TT--HHHHHHHHHH
T ss_pred -------------hcc----chhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHH-HhCCCHHHHHHHHHH
Confidence 000 1123555666666642 222111111 25777743 466788899999999
Q ss_pred HHHHHH
Q 037144 495 VQEHLE 500 (502)
Q Consensus 495 l~~~~~ 500 (502)
|+++.+
T Consensus 384 L~k~i~ 389 (389)
T PF05889_consen 384 LDKIIK 389 (389)
T ss_dssp HHHHHH
T ss_pred HHHHhC
Confidence 999864
No 300
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.54 E-value=7.2e-12 Score=127.65 Aligned_cols=278 Identities=13% Similarity=0.107 Sum_probs=155.6
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC------CEEEEecCCCCCccc
Q 037144 142 GGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK------NIRAIKTTKSSSYGL 215 (502)
Q Consensus 142 ~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~------~v~~v~~~~~~~~~~ 215 (502)
-.+|++|||+||..|+..+|... + ++.+|......|-+...++...|.... .+..++.. . ..
T Consensus 86 ~~~~~~SGseA~~~Al~~ar~~~----~----~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~ 153 (375)
T PRK04260 86 LAFFCNSGAEANEAAIKIARKAT----G----KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA---I-FN 153 (375)
T ss_pred EEEEcCccHHHHHHHHHHHHHhc----C----CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe---C-CC
Confidence 36899999999999999997641 0 234555566678777666655443100 01111110 0 24
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCC
Q 037144 216 SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEC 291 (502)
Q Consensus 216 d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~ 291 (502)
|+++|++.+.++ ..+|++....+.+|.+-| +++|.++|+++|+++++|++|.+.......+.....++ .
T Consensus 154 dl~~l~~~l~~~------~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~-~ 226 (375)
T PRK04260 154 DLNSVKALVNKN------TAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGI-E 226 (375)
T ss_pred CHHHHHHhcCCC------eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCC-C
Confidence 889999887532 346777777778888754 89999999999999999999976422111111111233 3
Q ss_pred CCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc
Q 037144 292 VDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG 371 (502)
Q Consensus 292 aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g 371 (502)
.|.+ ++.|.++.....|.++.++. . .+.+... .+.. ++ .+.+..+..+..+++.+.
T Consensus 227 pdi~--t~sK~l~~G~~ig~~~~~~~-~-~~~~~~~-~~~~------------------t~-~~~~~~~~aa~a~l~~~~ 282 (375)
T PRK04260 227 PDIF--TLAKGLANGVPVGAMLAKSS-L-GGAFGYG-SHGS------------------TF-GGNKLSMAAASATLDIML 282 (375)
T ss_pred CCEE--EecccccCCcceEEEEEcHH-H-HhhcCCC-CCCC------------------CC-CcCHHHHHHHHHHHHHHH
Confidence 5655 46799875566888888643 2 2222110 0000 00 011112233344444433
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHH
Q 037144 372 VAN-LRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRE 450 (502)
Q Consensus 372 ~~g-~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (502)
.+. .++..+....+.+.+.+.+.+.+.+.-+ +....++.+.+... ..+
T Consensus 283 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~------------------------------~~~ 331 (375)
T PRK04260 283 TAGFLEQALENGNYLQEQLQKALQDKETVTTV-RGLGYMIGIETTAD------------------------------LSQ 331 (375)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE-eccceEEEEEecCc------------------------------HHH
Confidence 322 2233333334444444444444322222 11233444444211 246
Q ss_pred HHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 451 LLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 451 l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
+.+++.++|..+.+. +...+|++.... .+++||+++++.|+++
T Consensus 332 ~~~~l~~~Gi~v~~~----~~~~lR~~~~~~-~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 332 LVEAARDKGLIVLTA----GTNVIRLLPPLT-LTKEEIEQGIAILSEV 374 (375)
T ss_pred HHHHHHhCCCEEecC----CCCEEEEcCCCc-cCHHHHHHHHHHHHHh
Confidence 777787889754322 346799998544 4577999999999775
No 301
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.53 E-value=5.6e-12 Score=136.71 Aligned_cols=362 Identities=10% Similarity=0.047 Sum_probs=213.9
Q ss_pred chhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHH-------HHhhcCCCCccccc
Q 037144 38 PGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEM-------LSSGFNVVGLDWIS 110 (502)
Q Consensus 38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-------l~~~~n~~~~~~~~ 110 (502)
|..++..-+..+|+ +.+..++++++++....|.. ...|.|--.-+...|+++.+- ++++ -+++..-++
T Consensus 46 P~~ir~~~~l~lp~-~~sE~e~~~~~~~~a~kN~~---~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaY-TPYQpEisQ 120 (954)
T PRK12566 46 PPAIRLNRPLDLPA-ALDEQAALARLRGYAEQNQV---WTSLIGMGYHGTVTPTVILRNVLENPGWYTAY-TPYQPEIAQ 120 (954)
T ss_pred CHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCC---ccccccccccCCcCcHHHHHHHHhCchhhhcC-CCCCchhhh
Confidence 55665433456666 68999999999988666644 345666443344556666332 3332 344433345
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH
Q 037144 111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK 190 (502)
Q Consensus 111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 190 (502)
+....-+|.+ .++++|.|++-. +..+.-++|.+- .|+..++... +. ++.++++++..|+....
T Consensus 121 G~Lqal~e~Q--tmi~~LtGm~va-------NASl~D~atA~a-EA~~ma~~~~-~~------k~~~~~v~~~~hP~~~~ 183 (954)
T PRK12566 121 GRLEALLNFQ--QMTIDLTGLDLA-------NASLLDEATAAA-EAMALAKRVA-KS------KSNRFFVDEHCHPQTLS 183 (954)
T ss_pred HHHHHHHHHH--HHHHHHhCchhh-------hhhhccchhHHH-HHHHHHHHHh-hc------CCCEEEECCCCCHHHHH
Confidence 5555556655 789999999853 223334444222 2333333211 10 24568899999986554
Q ss_pred H----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144 191 A----AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV 266 (502)
Q Consensus 191 a----a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l 266 (502)
. ++.+|+ +++. ++|++.+.++ .+.|++..++ ..|.+.++++|++++|+.|..+
T Consensus 184 v~~t~~~~~g~---~i~~-------------~~~~~~~~~~------~~~v~vq~P~-~~G~i~d~~~i~~~~h~~gal~ 240 (954)
T PRK12566 184 VLRTRAEGFGF---ELVV-------------DAVDNLAAHA------VFGALLQYPD-THGEIRDLRPLIDQLHGQQALA 240 (954)
T ss_pred HHHHhhhcCCc---EEEE-------------cchhhcCCCC------EEEEEEECCC-CceEEccHHHHHHHHHHcCCEE
Confidence 3 344565 5553 2233333222 3467676665 7899999999999999999875
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-----cceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144 267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-----DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK 341 (502)
Q Consensus 267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-----~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 341 (502)
+ +++--...........+ +||.++.+ ++-|++|. ..|++.+|++ + ....|..+.+...+ .
T Consensus 241 ~-~~~d~laL~ll~~Pge~-----GADI~vG~-~Q~fGvp~~~GGP~ag~~a~~~~--~---~R~~PGRivG~s~D---~ 305 (954)
T PRK12566 241 C-VAADLLSLLVLTPPGEL-----GADVVLGS-TQRFGVPMGYGGPHAAYFACRDD--Y---KRAMPGRIIGVSRD---A 305 (954)
T ss_pred E-EEeCHHHHhCCCChhhc-----CCcEEeeC-CCcCCCCCCCCCCCeeeeeehHH--H---HhhCCCCccceeec---C
Confidence 5 44432222222222222 89998554 44444443 3677877754 2 23345555443333 1
Q ss_pred ccccCCCcccccC----CCCCCc----------hHHHHHHH--HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 037144 342 EQEVGYKDWQITL----CRRFRS----------LKLWVVIR--NFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR 405 (502)
Q Consensus 342 ~~~~~~~~~~~~~----sr~~~a----------l~~~~~l~--~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~ 405 (502)
.+...+. .++|. -||..| +++.+++. ++|.+|++++.++...++.+|.+.|.+ .|+++...+
T Consensus 306 ~G~~a~~-l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~~~~ 383 (954)
T PRK12566 306 RGNTALR-MALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEA-KGIKRLNRH 383 (954)
T ss_pred CCCeeee-hhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh-cCCccccCC
Confidence 2222221 22222 355333 23333333 469999999999999999999999999 599998776
Q ss_pred CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcH
Q 037144 406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTME 485 (502)
Q Consensus 406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~ 485 (502)
-+..++++.... ..++.++..+.|.-+.. ++ ...+.+|+- -.+++
T Consensus 384 fF~~~~v~~~~~------------------------------~~~~~~~a~~~~~n~r~---~~-~~~~~~s~d-e~~~~ 428 (954)
T PRK12566 384 FFDTLTLEVGGA------------------------------QAAIIESAEAARINLRI---LG-RGRLGVSLD-ETCDE 428 (954)
T ss_pred ccceEEEEccCC------------------------------HHHHHHHHHHCCCeeEE---eC-CCeEEEEeC-CCCCH
Confidence 677777766211 23455555556653221 22 235888875 56788
Q ss_pred HHHHHHHHHHH
Q 037144 486 SHVRAAWTVVQ 496 (502)
Q Consensus 486 ~di~~~~~~l~ 496 (502)
+|++.+++.+.
T Consensus 429 ~~~~~~~~~f~ 439 (954)
T PRK12566 429 ATVARLFDIFL 439 (954)
T ss_pred HHHHHHHHHhc
Confidence 89999999884
No 302
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.53 E-value=1.5e-11 Score=119.79 Aligned_cols=332 Identities=12% Similarity=0.108 Sum_probs=206.3
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144 106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH 185 (502)
Q Consensus 106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (502)
..|..+.+..++-..+.+.....+..|... ..+.++|+|.|.+...++.++.+ .++.|++...++
T Consensus 94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~----~wdiiit~G~t~~l~~~l~~~~N-----------~gd~vlie~~ty 158 (472)
T KOG0634|consen 94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYK----NWDIIITNGNTDGLFKVLRTLIN-----------RGDHVLIEEYTY 158 (472)
T ss_pred hccccccCcHHHHHHHHHhccccccCCCCC----CceEEEecCCchHHHHHHHHhhc-----------CCCceEEecccc
Confidence 356666677766655555444344444321 12789999999999999988887 578899999999
Q ss_pred hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc---CCccEEEEEe--cCCccccccCCh---hHHHH
Q 037144 186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA---ELIPLFLCAT--VGTTAITAVDPL---KPLCD 257 (502)
Q Consensus 186 ~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~---g~~p~~Vv~t--~gtt~~G~idpl---~eI~~ 257 (502)
.+-..+.+.+|+ +++.|+.|.+ .|++|.|++.+...... ..+|- |.-| .|.|+||..-.+ ++|.+
T Consensus 159 ~~AL~s~~a~gv---~~ipv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~-vlYTIPTgqNPTG~tls~errk~iy~ 231 (472)
T KOG0634|consen 159 PSALQSMEALGV---KIIPVKMDQD---GIDPESLEEILSNWKPGSYKKPKPH-VLYTIPTGQNPTGNTLSLERRKKIYQ 231 (472)
T ss_pred hHHHHhccccCc---eEEeccccCC---CCCHHHHHHHHhcCCcccccCCCCe-EEEeCcCCCCCCCCccCHHHHHHHHH
Confidence 999999999999 9999988753 69999999999865432 12343 3333 488999998655 58999
Q ss_pred HHHHhCCEEEeecccccccccC---------ccch------hhhcCCCCCC----eeEEc-cCCcCCCCCcceEEEeeCc
Q 037144 258 VAKQFGIWVHVDAAYAGSACIC---------PEFR------HFIDGVECVD----SFSFN-PHKWLFTTLDCCCLWVKDP 317 (502)
Q Consensus 258 i~~~~g~~lhVDaA~g~~~~~~---------~~~~------~~~~~~~~aD----si~~~-~hK~l~~p~~~g~~~~r~~ 317 (502)
+|+||++.++.|..|.-..+.. |.+. .+....-..| +|..+ ++|-+......|++...+
T Consensus 232 LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~- 310 (472)
T KOG0634|consen 232 LARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNS- 310 (472)
T ss_pred HHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCH-
Confidence 9999999999999885544321 1111 1111111111 33333 678887666677765433
Q ss_pred hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHH----HHHHHHHHHHHHH
Q 037144 318 SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIR----SHVGMAKLFERLV 393 (502)
Q Consensus 318 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~----~~~~la~~l~~~l 393 (502)
..+...+... +.+.+....+...-+++.++.+|++|+.+.+. .+...+..+...+
T Consensus 311 ~~l~ril~~a---------------------e~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al 369 (472)
T KOG0634|consen 311 LFLKRILDLA---------------------EVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSAL 369 (472)
T ss_pred HHHHHHhhhc---------------------ceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222221110 11111112235567788899999977655444 4456667777777
Q ss_pred hc-CCCe-EEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE--C
Q 037144 394 TS-DKRF-EVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV--G 469 (502)
Q Consensus 394 ~~-~~~~-~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~ 469 (502)
.+ +|.- -.+.+|..+++.+.-.+-.. .+ ....+++....+...+.+.|..++.+..+ .
T Consensus 370 ~kylp~~~~~~~~P~aGmFiwv~i~~~~----------~~--------~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~ 431 (472)
T KOG0634|consen 370 DKYLPKSVCEYHPPKAGMFIWVEIPYIN----------FD--------TKKSINQIEEIIFIKAVKNGVKLVCGSWFMVD 431 (472)
T ss_pred HHhCCCCeeEEecCCcceEEEEEecccc----------cc--------cccchHHHHHHHHHHHHHCCeEEecCceeEEc
Confidence 54 4543 22346766666554433100 00 01223445556677778888866555433 1
Q ss_pred -----CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 470 -----GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 470 -----g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
++-++|+++.. .+.+++++.++.+..+.++
T Consensus 432 p~~s~~kiffRls~a~--a~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634|consen 432 PESSWSKIFFRLSIAF--AEPEKLDEGIERFGSVIKE 466 (472)
T ss_pred CccCCCcceEEEEeec--CCHHHHHHHHHHHHHHHHH
Confidence 33499999864 3556888888888777654
No 303
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.51 E-value=6.4e-11 Score=122.06 Aligned_cols=306 Identities=11% Similarity=0.037 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+...++.+.|++++.-+.. ..+|++||||||-.|+..||....++ | +..+|......|-...-+....
T Consensus 117 ~~~~~lAe~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t~~~-g----r~~ii~~~~~yHG~t~~~ls~t 184 (442)
T TIGR03372 117 PLRALLAKTLAALTPGKLK-------YSFFCNSGTESVEAALKLAKAYQSPR-G----KFTFIAASGAFHGKSLGALSAT 184 (442)
T ss_pred HHHHHHHHHHHHhCCCCcC-------EEEEeCCchHHHHHHHHHHHHHHhhc-C----CcEEEEECCCccCCCHHHhhcc
Confidence 3445577778887643211 47899999999999999998763211 1 1223444444554433333322
Q ss_pred CC-------C--CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHh
Q 037144 196 GI-------D--RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQF 262 (502)
Q Consensus 196 Gl-------g--~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~ 262 (502)
|- + ...++.+|.+ |.+.+++.+++....+....+|++.......|.+-| +++|.++|++|
T Consensus 185 ~~~~~~~~~~p~~~~~~~~p~~-------d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~ 257 (442)
T TIGR03372 185 AKPAFRKPFMPLLPGFHHVAFG-------DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEF 257 (442)
T ss_pred CCcccCCCCCCCCCCCEEeCCC-------CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHc
Confidence 21 0 0123444432 678888888654334445667777776667788888 99999999999
Q ss_pred CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144 263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK 341 (502)
Q Consensus 263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 341 (502)
|+.+++|.++.|+-....-+.....++ ..|.+++ .|.++.. ++.|.++.++. . .+.+... ++....
T Consensus 258 g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~--gK~lg~G~~Pigavv~~~~-i-~~~~~~~-~~~~~~------- 324 (442)
T TIGR03372 258 GALLILDEVQTGMGRTGKMFACEHEGV-QPDILCL--AKALGGGVMPIGATIATEA-V-FSVLFDN-PFLHTT------- 324 (442)
T ss_pred CCEEEEeecccCCCccccchhhhhcCC-CCCeeee--hhhhcCCcccceEEEecHH-H-HHhhhcc-CccccC-------
Confidence 999999999966432221111111234 5788875 5998765 35788777633 2 2333211 122110
Q ss_pred ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----C-CeEEecCCCeeEEEEEeec
Q 037144 342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----K-RFEVAFPRNFSLVCFRVTP 416 (502)
Q Consensus 342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~-~~~l~~~~~~~~v~f~~~~ 416 (502)
|+ .+.+..+.+..++++.+-.+ ++.++..++.++|++.|+++ | .+.=+ .-...++.+.+..
T Consensus 325 ---------T~-~gnp~~~Aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~v-RG~Gl~~giel~~ 390 (442)
T TIGR03372 325 ---------TF-GGNPLACAAALATINELLEK---NLPAQAAIKGDFLLDGFQQLAAEYPDLIIEA-RGKGLLMAIEFRD 390 (442)
T ss_pred ---------CC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-ecceEEEEEEeCC
Confidence 00 11122223334445544333 34556667777777777653 2 11111 1123344554432
Q ss_pred CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144 417 SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQ 496 (502)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~ 496 (502)
++....+.+.+.++|.+. .... .+...+|++.. ...+++|+|++++++.
T Consensus 391 ----------------------------~~~~~~i~~~l~~~Gvl~-~~~~-~~~~~lr~~Pp-l~~t~~~id~~~~~l~ 439 (442)
T TIGR03372 391 ----------------------------NEIGYAFAKELFQQNILV-AGTL-NNAKSIRIEPP-LTITIEQCALVIKAAK 439 (442)
T ss_pred ----------------------------hHHHHHHHHHHHHCCcEE-eecC-CCCCEEEEECC-cccCHHHHHHHHHHHH
Confidence 122356778888888653 3221 12358999875 4456779999999998
Q ss_pred HH
Q 037144 497 EH 498 (502)
Q Consensus 497 ~~ 498 (502)
+.
T Consensus 440 ~~ 441 (442)
T TIGR03372 440 DA 441 (442)
T ss_pred Hh
Confidence 75
No 304
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.50 E-value=4.4e-11 Score=125.32 Aligned_cols=333 Identities=12% Similarity=0.017 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
++.+.++.+.|.+++.-.. . ...+|+++|++||..|+..||..... .+..+ +..+|......|-+..-+..+
T Consensus 132 ~~~~~~lae~L~~~~~~~~-~-----~~v~f~~SGsEA~e~AlKlAr~~~~~-~g~~~-r~~iI~~~~~yHG~t~~a~sl 203 (504)
T PLN02760 132 TKPSLDLAKELLEMFTARK-M-----GKVFFTNSGSEANDTQVKLVWYYNNA-LGRPN-KKKFIARSKSYHGSTLISASL 203 (504)
T ss_pred cHHHHHHHHHHHhhcCCCC-C-----CEEEEeCChHHHHHHHHHHHHHHHHh-cCCCC-CcEEEEECCCccCChHhhhhc
Confidence 3445556666777653211 1 14789999999999999999865311 12111 344566666678776555554
Q ss_pred cCCC---------CCCEEEEecCCCCC----c-------ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---
Q 037144 195 VGID---------RKNIRAIKTTKSSS----Y-------GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP--- 251 (502)
Q Consensus 195 ~Glg---------~~~v~~v~~~~~~~----~-------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp--- 251 (502)
.|.. ...+..++.+..-. + ....++|++++... ....+.+|++.......|.+-|
T Consensus 204 sg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g~gG~~~p~~~ 281 (504)
T PLN02760 204 SGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKE--GPETIAAFIAEPVMGAGGVIPPPAT 281 (504)
T ss_pred cCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhc--CCCceEEEEECCccCCCCCcCCCHH
Confidence 4431 01122333211000 0 01124577766431 1234556777666666788888
Q ss_pred -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCcc
Q 037144 252 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQ 329 (502)
Q Consensus 252 -l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~ 329 (502)
+++|.++|++||+++++|.++.|+.....-+..-..++ ..|.++++ |.++..+ +.|.+++++. . .+.+.....
T Consensus 282 yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv-~PDivtlg--K~lggG~~PigAv~~~~~-i-~d~~~~~~~ 356 (504)
T PLN02760 282 YFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNI-KPDLVSLA--KALSSAYMPIGAVLVSPE-I-SDVIHSQSN 356 (504)
T ss_pred HHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCC-CCcEEEec--ccccCCccccceEeecHH-H-Hhhhhcccc
Confidence 99999999999999999999966543333222222344 48887765 9887543 4677776533 2 233321100
Q ss_pred cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--Ce
Q 037144 330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR--NF 407 (502)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~--~~ 407 (502)
..... ....|.. +.+..+....++|+.+-. ++++++..++.++|++.|+++....++... ..
T Consensus 357 ~~~~~------------~h~~T~~-gnPl~~Aaala~Le~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~G 420 (504)
T PLN02760 357 KLGSF------------AHGFTYS-GHPVSCAVALEALKIYKE---RNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTG 420 (504)
T ss_pred cccCc------------ccCCCCC-CCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCc
Confidence 00000 0001111 112222333344444432 256788888889998888765322222111 12
Q ss_pred eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144 408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH 487 (502)
Q Consensus 408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d 487 (502)
.++.+.+...... . ........+...+.+.+.++|.+.... + ..+|++.. ...+++|
T Consensus 421 l~~gie~~~~~~~-----------~------~~~~~~~~~~~~i~~~~~~~Gvl~~~~----g-~~lrl~Pp-l~it~ee 477 (504)
T PLN02760 421 LILGTEFVDNKSP-----------N------DPFPAEWGVGAYFGAECKKRGMLVRVA----G-DNIMMSPP-LIITPEE 477 (504)
T ss_pred eEEEEEEecCCcc-----------c------ccccchhHHHHHHHHHHHhCCcEEEec----C-CEEEEECC-CCCCHHH
Confidence 3444444321100 0 000001234567788888889754321 2 36888853 3467779
Q ss_pred HHHHHHHHHHHHHh
Q 037144 488 VRAAWTVVQEHLEA 501 (502)
Q Consensus 488 i~~~~~~l~~~~~~ 501 (502)
||++++++.+++++
T Consensus 478 id~~~~~l~~al~~ 491 (504)
T PLN02760 478 VDELISIYGKALKA 491 (504)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887653
No 305
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.49 E-value=7.2e-11 Score=121.96 Aligned_cols=313 Identities=12% Similarity=0.064 Sum_probs=168.7
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
....++.+.|.+++..+... ....+| ++|||+||..|++.||... + +..+|......|-...-+...
T Consensus 82 ~~~~~lae~l~~~~~~~~~~----~~~~~f~~~sGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~~ls~ 149 (425)
T PRK09264 82 TAKREFLETFEETILKPRGL----DYKVQFTGPTGTNAVEAALKLARKVT----G----RTNIVAFTNGFHGMTLGSLAV 149 (425)
T ss_pred HHHHHHHHHHHHhhcCCcCC----CceEEEeCCCHHHHHHHHHHHHHHhc----C----CCeEEEECCccCCccHHHHHh
Confidence 34455667777765333211 002455 5799999999999998751 1 222344444445433323222
Q ss_pred cC---------CCCCCEEEEecCCCCCc-ccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc----CChhHHHHHHH
Q 037144 195 VG---------IDRKNIRAIKTTKSSSY-GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV----DPLKPLCDVAK 260 (502)
Q Consensus 195 ~G---------lg~~~v~~v~~~~~~~~-~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i----dpl~eI~~i~~ 260 (502)
.| .....+..+|....... .-|+++|++.|++.......+.+|++.......|.+ +.+++|.++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~ 229 (425)
T PRK09264 150 TGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCR 229 (425)
T ss_pred cCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHH
Confidence 22 11224566665321000 126788888886532111235567766655556654 46999999999
Q ss_pred HhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCC-CCcceEEEeeCchhhhhhhcCCcccccCccCCCC
Q 037144 261 QFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE 339 (502)
Q Consensus 261 ~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 339 (502)
+||+++++|.++.|+......+.....++ ..|.++++ |.++. ...+|++++++. +. .+. ......
T Consensus 230 ~~g~llI~DEV~tG~GrtG~~~~~~~~~v-~PDi~t~~--K~l~~~G~pigav~~~~~--i~-~~~--~~~~~~------ 295 (425)
T PRK09264 230 KHDILLIVDDIQAGCGRTGTFFSFERAGI-TPDIVTLS--KSISGYGLPMALVLIKPE--LD-VWK--PGEHNG------ 295 (425)
T ss_pred HcCcEEEEechhhCCccccHHHHHhhcCC-CCCEEEec--cccCCCccceEEEEEchh--hh-ccC--CCccCC------
Confidence 99999999999976432211111111233 56888775 98875 566788888644 11 111 000000
Q ss_pred CcccccCCCcccccCCCCCCchHHHHHH-HHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCC-CeeEEEEE
Q 037144 340 PKEQEVGYKDWQITLCRRFRSLKLWVVI-RNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPR-NFSLVCFR 413 (502)
Q Consensus 340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l-~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~-~~~~v~f~ 413 (502)
+. .+.+.......+++ ..+.. .++.++..++.++|++.|++ .|.+ +.... ...++.+.
T Consensus 296 -----------T~-~gnp~~~aaa~a~l~~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~~-~~~vrg~Gl~~~i~ 359 (425)
T PRK09264 296 -----------TF-RGNNLAFVTATAALEEYWSD---DAFEKEVKAKGELVRERLEEIAAKYPGL-GAEVRGRGMMQGID 359 (425)
T ss_pred -----------CC-CCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHHhCCCc-eecceecccEEEEE
Confidence 10 01111222233444 22222 24566667777777777654 3322 11111 12333444
Q ss_pred eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHH
Q 037144 414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWT 493 (502)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~ 493 (502)
+.+ ......+.+.+.++|.++... .. ....||++.. ...++++|+++++
T Consensus 360 l~~----------------------------~~~~~~l~~~~~~~Gv~~~~~-~~-~~~~lr~~p~-l~~t~~ei~~~~~ 408 (425)
T PRK09264 360 FGD----------------------------GELAGKIAAEAFENGLIIETS-GP-EDEVVKLLPP-LTIDEEELEEGLD 408 (425)
T ss_pred ecC----------------------------hHHHHHHHHHHHHCCCEEecc-CC-CCCEEEEeCC-CCCCHHHHHHHHH
Confidence 432 223456788888889754332 11 1357888854 4456789999999
Q ss_pred HHHHHHHh
Q 037144 494 VVQEHLEA 501 (502)
Q Consensus 494 ~l~~~~~~ 501 (502)
.|.++.++
T Consensus 409 ~l~~~l~~ 416 (425)
T PRK09264 409 ILEEAVAE 416 (425)
T ss_pred HHHHHHHH
Confidence 99887653
No 306
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.48 E-value=4.6e-11 Score=118.54 Aligned_cols=309 Identities=11% Similarity=0.055 Sum_probs=182.7
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
+++|.++.+.+.++++.-+ ..-|+++||||++.|+..||-.. . ++.+|-.....|-+.+...--
T Consensus 92 te~Ei~~Aell~~~~p~~e--------~vrfvnSGTEAtmsAiRlARa~T-g-------R~kIikF~G~YHG~~D~~lv~ 155 (432)
T COG0001 92 TELEVELAELLIERVPSIE--------KVRFVNSGTEATMSAIRLARAYT-G-------RDKIIKFEGCYHGHSDSLLVK 155 (432)
T ss_pred CHHHHHHHHHHHHhcCccc--------EEEEecchhHHHHHHHHHHHHhh-C-------CCeEEEEcCCCCCCccHHHhh
Confidence 6788888999999987633 47899999999999999999753 1 233444444555444433222
Q ss_pred cC-------------CC---CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhH
Q 037144 195 VG-------------ID---RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKP 254 (502)
Q Consensus 195 ~G-------------lg---~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~e 254 (502)
.| +. .+.++.+|.+ |++.|++++++. |....+|++.-.-.+.|.+-| +++
T Consensus 156 agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-------D~~al~~~~~~~---g~~IAaVIvEPv~gn~g~i~p~~~Fl~~ 225 (432)
T COG0001 156 AGSGAATLGSPSSPGVPADVAKHTLVLPYN-------DLEALEEAFEEY---GDDIAAVIVEPVAGNMGVVPPEPGFLEG 225 (432)
T ss_pred cCcCcccCCCCCCCCCChhhhccEEEecCC-------CHHHHHHHHHHc---CCcEEEEEeccccCCCCCCCCCHHHHHH
Confidence 22 21 1134445543 899999999764 334567888777778888866 789
Q ss_pred HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCc
Q 037144 255 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNE 334 (502)
Q Consensus 255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~ 334 (502)
|.++|+++|+.|+.|....|+-+..-. .+..-++ ..|..|++ |.++...++|.+-.|.. .+ +.+... ..+++.
T Consensus 226 Lr~lt~e~G~lLI~DEViTGFR~~~gG-aq~~~gi-~PDlttlG--KiIGGGlP~ga~gGr~e-iM-~~~~p~-g~vyqa 298 (432)
T COG0001 226 LRELTEEHGALLIFDEVITGFRVALGG-AQGYYGV-EPDLTTLG--KIIGGGLPIGAFGGRAE-IM-EQLAPL-GPVYQA 298 (432)
T ss_pred HHHHHHHcCcEEEEecchhhcccCCcc-cccccCc-Ccchhhhh--hhhcCCcceeeeccHHH-HH-hhhCCC-CCcccc
Confidence 999999999999999998776554211 1112233 57877766 99988888999876533 22 222111 112211
Q ss_pred cCCCCCcccccCCCcccccCCCCCCchHH---HHHHHHhcH-HHHHHHHHHHHHHHHHHHHHH----hcCCCeEEecCCC
Q 037144 335 ATDQEPKEQEVGYKDWQITLCRRFRSLKL---WVVIRNFGV-ANLRNFIRSHVGMAKLFERLV----TSDKRFEVAFPRN 406 (502)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~-~g~~~~~~~~~~la~~l~~~l----~~~~~~~l~~~~~ 406 (502)
. +-...++.+ .++++.+-. ++ ..++..+++++|++.| .+. ++.+.....
T Consensus 299 G-------------------T~sgnplamaAG~atl~~l~~~~~---~y~~l~~~~~~L~~gl~~~~~~~-g~~~~v~~~ 355 (432)
T COG0001 299 G-------------------TLSGNPLAMAAGLATLEELMTEEG---VYERLDALGERLAEGLRAAAERH-GIPLTVNRV 355 (432)
T ss_pred C-------------------CCCCcHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeee
Confidence 1 111233333 334444322 22 3444555555555555 444 555543444
Q ss_pred eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144 407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES 486 (502)
Q Consensus 407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~ 486 (502)
.+++++.+.+.... +.......+...+ .++...|.++|. ++++..++ ..+.+...+++
T Consensus 356 gsm~~i~F~~~~~~--------------n~~da~~sd~~~~-~~~~~~~l~~GV-~l~ps~~e------a~flS~ahte~ 413 (432)
T COG0001 356 GSMFGIFFTEEGVR--------------NYADAKRSDVERF-AKFFHHLLNRGV-YLAPSQFE------AGFLSTAHTEE 413 (432)
T ss_pred cceEEEEecCCCCC--------------CHHHHHhhchHHH-HHHHHHHHhCCc-ccCCcccc------ceeeecccCHH
Confidence 56777766553210 1111111222333 344458888886 55554332 23334445777
Q ss_pred HHHHHHHHHHHHHHh
Q 037144 487 HVRAAWTVVQEHLEA 501 (502)
Q Consensus 487 di~~~~~~l~~~~~~ 501 (502)
|||+.++++.++.++
T Consensus 414 di~~~~~a~~~~~~~ 428 (432)
T COG0001 414 DIDRTLEAADEAFKE 428 (432)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999987764
No 307
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.48 E-value=2.8e-11 Score=120.80 Aligned_cols=235 Identities=16% Similarity=0.201 Sum_probs=162.4
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144 109 ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF 188 (502)
Q Consensus 109 ~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (502)
...|....+|+. ++.+=|.. .++.+++|..|+..++.+... +++.|+++...+...
T Consensus 60 ~~nPT~~~lE~~----~a~LEg~~---------~~~afsSGmaAI~~~~l~ll~-----------~GD~vl~~~~~YG~t 115 (396)
T COG0626 60 TGNPTRDALEEA----LAELEGGE---------DAFAFSSGMAAISTALLALLK-----------AGDHVLLPDDLYGGT 115 (396)
T ss_pred CCCccHHHHHHH----HHHhhCCC---------cEEEecCcHHHHHHHHHHhcC-----------CCCEEEecCCccchH
Confidence 356767777766 45554443 468888888777666555443 567777777766543
Q ss_pred H----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHH-HHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC
Q 037144 189 Q----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINL-DVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG 263 (502)
Q Consensus 189 ~----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~-~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g 263 (502)
. +....+|+ ++..++. .+.+++++++.+ .+ .+|.+-.++|++.-+-||++|+++|+++|
T Consensus 116 ~~~~~~~l~~~gi---~~~~~d~-------~~~~~~~~~~~~~~t------k~v~lEtPsNP~l~v~DI~~i~~~A~~~g 179 (396)
T COG0626 116 YRLFEKILQKFGV---EVTFVDP-------GDDEALEAAIKEPNT------KLVFLETPSNPLLEVPDIPAIARLAKAYG 179 (396)
T ss_pred HHHHHHHHHhcCe---EEEEECC-------CChHHHHHHhcccCc------eEEEEeCCCCcccccccHHHHHHHHHhcC
Confidence 3 34455677 7777653 255666766664 44 38999999999999999999999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc--eEEEeeCchhhhhhh-cCCcccccCccCCCCC
Q 037144 264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC--CCLWVKDPSCLLSTL-STNPQYLKNEATDQEP 340 (502)
Q Consensus 264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~--g~~~~r~~~~l~~~~-~~~~~yl~~~~~~~~~ 340 (502)
+.++||.+++.+.+.-| ... +||.+.-+.-|++++...+ |+++.++... .+.+ .....++.
T Consensus 180 ~~vvVDNTfatP~~q~P-L~~------GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~-~~~~~~~~~~~~G-------- 243 (396)
T COG0626 180 ALVVVDNTFATPVLQRP-LEL------GADIVVHSATKYLGGHSDVLGGVVLTPNEEL-YELLFFAQRANTG-------- 243 (396)
T ss_pred CEEEEECCcccccccCh-hhc------CCCEEEEeccccccCCcceeeeEEecChHHH-HHHHHHHHHhhcC--------
Confidence 99999999988766433 221 7999999999999876443 4344344433 2221 01101111
Q ss_pred cccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CC--------------
Q 037144 341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF-PR-------------- 405 (502)
Q Consensus 341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~-~~-------------- 405 (502)
--..+.-.|..+| |.+-+.-+++++.++|..+.+.|++.|.++-+. |.
T Consensus 244 ---------------~~l~p~dA~l~lR--GlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~ 306 (396)
T COG0626 244 ---------------AVLSPFDAWLLLR--GLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQM 306 (396)
T ss_pred ---------------CCCCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhc
Confidence 1124556687777 668888999999999999999999999988543 31
Q ss_pred --CeeEEEEEeec
Q 037144 406 --NFSLVCFRVTP 416 (502)
Q Consensus 406 --~~~~v~f~~~~ 416 (502)
..++++|.+..
T Consensus 307 ~g~gg~~Sf~l~~ 319 (396)
T COG0626 307 TGYGGLFSFELKN 319 (396)
T ss_pred CCCceEEEEEeCC
Confidence 35688898865
No 308
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.48 E-value=1.5e-10 Score=117.01 Aligned_cols=319 Identities=11% Similarity=0.028 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G 196 (502)
...++.+.|.+++.-+.. .-.+|+++||+||-.|+..||...- +..+|-.....|-...-+..+.|
T Consensus 100 ~~v~~ae~L~~~~p~~~~------~~~~f~~sGaeA~E~AiKiAr~~Tg--------r~~viaf~~afHG~T~galslT~ 165 (447)
T COG0160 100 PYVELAEKLTALAPGSGL------KKVFFGNSGAEAVEAAIKIARAYTG--------RPGVIAFDGAFHGRTLGALSLTG 165 (447)
T ss_pred hHHHHHHHHHHhCCcccC------CeEEecCCcHHHHHHHHHHHHHHhC--------CCcEEEECCcccccchhhHHhcc
Confidence 344455666666543211 2579999999999999999998641 23344445556755444444332
Q ss_pred --------CC--CCCEEEEecCCC--CCc--------ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----h
Q 037144 197 --------ID--RKNIRAIKTTKS--SSY--------GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----L 252 (502)
Q Consensus 197 --------lg--~~~v~~v~~~~~--~~~--------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l 252 (502)
.| ...+..+|.... +.+ .-..+.++..|.+....+..|.++++-......|.+.| +
T Consensus 166 ~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl 245 (447)
T COG0160 166 SKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFL 245 (447)
T ss_pred CccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHH
Confidence 22 124777776421 111 22345566666666556667888888887878888855 8
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCccccc
Q 037144 253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLK 332 (502)
Q Consensus 253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~ 332 (502)
+++.++|++||+.+++|.++.|+..-..-+..--.++ ..|.+|++ |.++.....|.++.|..- .+.......+
T Consensus 246 ~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv-~PDivt~a--K~ig~G~Pl~avv~r~ei--~~~~~g~~~~-- 318 (447)
T COG0160 246 KALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTLA--KSLGGGLPLSAVVGRAEI--MDWPPGGHGG-- 318 (447)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCC-CCCEEEec--ccccCCCceeEEeccHHh--cccCCcccCC--
Confidence 8999999999999999999988765442222222344 68999977 988877778888876442 1111111111
Q ss_pred CccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCCC-e-eE
Q 037144 333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFPRN-F-SL 409 (502)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~~~-~-~~ 409 (502)
+ -.+.+..+.+..++|+.+-.+ .+.++..++.++++++|.++ ..+.+++..+ . -+
T Consensus 319 ------------------T-f~GNpva~Aaa~AvL~vie~e---~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm 376 (447)
T COG0160 319 ------------------T-FGGNPVACAAALAVLDVIEEE---NLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLM 376 (447)
T ss_pred ------------------C-CCcCHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHhhcCceecccccceE
Confidence 1 122222333333444444333 67777888888888888653 2344554433 1 23
Q ss_pred EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144 410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR 489 (502)
Q Consensus 410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~ 489 (502)
+-+.+..+.-.+ +-..+...++.+++.++|.++.+.+.. ..+||+..- ...+++++|
T Consensus 377 ~giE~v~d~~t~--------------------~p~~~~~~~i~~~~~~~Glil~~~G~~--~nviRi~PP-L~is~e~~d 433 (447)
T COG0160 377 IGVELVKDRDTK--------------------EPDAELAAKIVARAFERGLLLLTCGPH--GNVLRILPP-LTISDEELD 433 (447)
T ss_pred EEEEEecCCCCC--------------------CCCHHHHHHHHHHHHHcCCEEeccCCC--CcEEEEeCC-cccCHHHHH
Confidence 334443211000 001355778899999999876665432 458999853 346677999
Q ss_pred HHHHHHHHHHHh
Q 037144 490 AAWTVVQEHLEA 501 (502)
Q Consensus 490 ~~~~~l~~~~~~ 501 (502)
.+++.|.+.+++
T Consensus 434 ~~l~il~~al~~ 445 (447)
T COG0160 434 EGLDILEEALKE 445 (447)
T ss_pred HHHHHHHHHHHh
Confidence 999999988764
No 309
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.48 E-value=1.1e-10 Score=121.09 Aligned_cols=317 Identities=11% Similarity=0.027 Sum_probs=174.5
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+.+.++.+.|++++.-.. ...+|+++|++||..|+..||... + ++.+|......|-+..-+..+.
T Consensus 86 ~~~~~la~~L~~~~~~~~-------~~v~f~~SGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~~~s~~ 150 (433)
T PRK08117 86 ESILKLAEELAEITPGGL-------DCFFFSNSGAEAIEGALKLAKHVT----K----RPYIISFTGCFHGRTLGALSVT 150 (433)
T ss_pred HHHHHHHHHHHHhCCCCC-------CEEEEeCcHHHHHHHHHHHHHHhc----C----CCeEEEECCCcCCcCHHHHhhc
Confidence 344556667777762111 147899999999999999998741 1 2345555555676554443332
Q ss_pred CC--------C--CCCEEEEecCCCCC--c--------ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144 196 GI--------D--RKNIRAIKTTKSSS--Y--------GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---- 251 (502)
Q Consensus 196 Gl--------g--~~~v~~v~~~~~~~--~--------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---- 251 (502)
+- + ...+..+|...... . .-|+++|++.++.... +..+.+|++.......|.+-|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~aavi~Epi~~~~G~~~~~~~~ 229 (433)
T PRK08117 151 TSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVT-PEEVAAVIIEPVLGEGGYIVPPKSF 229 (433)
T ss_pred CCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccC-CCcEEEEEECCeeCCCCCccCCHHH
Confidence 21 0 11244455431100 0 0156677777754211 223567777766677788888
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccc
Q 037144 252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYL 331 (502)
Q Consensus 252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl 331 (502)
+++|.++|++||+++++|.+|+|+......+.....++ ..|.+ .+.|.++..+..|+++.++. .. +.+... .+
T Consensus 230 l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv-~pDi~--t~sK~lg~G~pigav~~~~~-i~-~~~~~~-~~- 302 (433)
T PRK08117 230 LKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGV-VPDIM--TIAKGIASGLPLSAVVASKE-LM-EQWPLG-SH- 302 (433)
T ss_pred HHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCC-CCCEe--ehhhhccCCCcceeEEEcHH-HH-hhccCC-CC-
Confidence 99999999999999999999987422211111001122 35654 45699986677888777543 22 222110 00
Q ss_pred cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEec-CCCe-e
Q 037144 332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAF-PRNF-S 408 (502)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~-~~~~-~ 408 (502)
. .+. .+.+....+..++++.+..+ .+.++..++.+++++.|+++. .+.++. .+.. .
T Consensus 303 --~---------------~T~-~~np~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl 361 (433)
T PRK08117 303 --G---------------TTF-GGNPVACAAALATLEVIKEE---KLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGL 361 (433)
T ss_pred --C---------------CCC-CcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCc
Confidence 0 011 11112223333444443222 456667777888888776541 111111 1111 2
Q ss_pred EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144 409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV 488 (502)
Q Consensus 409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di 488 (502)
++.+.+.+... .. .......+.+.+.+.|.++.... ....++|++.. ...++++|
T Consensus 362 ~~gi~~~~~~~-------------------~~---~~~~~~~~~~~l~~~Gv~~~~~g--~~~~~lRl~p~-~~~t~~~i 416 (433)
T PRK08117 362 MIGIEIVDPDG-------------------EP---DGDAVEKILDKCLEKGLLFYLCG--NAGNVLRMIPP-LTVTKEEI 416 (433)
T ss_pred EEEEEEecCCC-------------------Cc---chHHHHHHHHHHHHCCCEEeecC--CCCCEEEEeCC-ccCCHHHH
Confidence 33344432110 00 02234567778888897654321 12468999964 34567799
Q ss_pred HHHHHHHHHHHHh
Q 037144 489 RAAWTVVQEHLEA 501 (502)
Q Consensus 489 ~~~~~~l~~~~~~ 501 (502)
++++++|.++.++
T Consensus 417 ~~~~~~l~~~l~~ 429 (433)
T PRK08117 417 DEGLDILDEALTE 429 (433)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987654
No 310
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.47 E-value=2.9e-10 Score=116.57 Aligned_cols=304 Identities=12% Similarity=0.053 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCe-EEEeCCCCchhHHHHHHHc
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKL-VVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~aa~~~ 195 (502)
...++.+.|.++.+..+ ..+|++|||+|+..|+..||.....+ |.. .++. +|......|-...-+....
T Consensus 83 ~~~~la~~L~~~~~~~~--------~v~f~~sGseA~e~AlklAr~~~~~~-g~~-~~r~~ii~~~~~yHG~t~~~~s~~ 152 (408)
T PRK04612 83 PPLKLAEELVTASRFAE--------KVFLCNSGTEANEAAIKLVRKWASSQ-GRP-ADKRVIVTFRGSFHGRTLAAVTAT 152 (408)
T ss_pred HHHHHHHHHHhhCCCCC--------EEEEcCchHHHHHHHHHHHHHHHHhh-CCC-CCCcEEEEECCCcCCccHHHHHhc
Confidence 34456677777754321 58999999999999999999764221 110 0133 4444444564433343333
Q ss_pred CCCC---------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHh
Q 037144 196 GIDR---------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQF 262 (502)
Q Consensus 196 Glg~---------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~ 262 (502)
|-.. ..++.+|. -|++.|++++.. ..+.+|++.-.....|.+.| +++|.++|++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~-----~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~ 220 (408)
T PRK04612 153 AQPKYQEGYEPLPGGFRYVDF-------NDVEALEAAMAG-----GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQH 220 (408)
T ss_pred CCcccccCCCCCCCCceEcCC-------CCHHHHHHhhCC-----CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 3210 01122221 278889888742 22445555443333344432 89999999999
Q ss_pred CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144 263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE 342 (502)
Q Consensus 263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 342 (502)
|+++++|.+|.+......-+.....++ ..|.+++ .|.++..+..|+++.++. . .+.+... . ..
T Consensus 221 g~llI~DEv~tg~gr~G~~~a~~~~~~-~pdi~t~--~K~l~~G~piga~~~~~~-~-~~~~~~~---~-~~-------- 283 (408)
T PRK04612 221 DALLVLDEIQCGMGRTGTLFAHWQEQV-TPDIVTL--AKALGGGFPIGAMLAGPK-V-AETMQFG---A-HG-------- 283 (408)
T ss_pred CCEEEEeccccCCCcCCchhhhhhcCC-CCCEEEE--cchhcCCCceEEEEECHH-H-HhhhcCC---C-cC--------
Confidence 999999999976433221111111111 3455555 699976677888876543 2 2222211 0 00
Q ss_pred cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEec--CCCeeEEEEEeecCcc
Q 037144 343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAF--PRNFSLVCFRVTPSAV 419 (502)
Q Consensus 343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~--~~~~~~v~f~~~~~~~ 419 (502)
.++ ++.+..+..+..+++.+-. .++.++..++.++|.+.|+++. .+.++. .....++.+.+.+..
T Consensus 284 -------~t~-~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~- 351 (408)
T PRK04612 284 -------TTF-GGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAH- 351 (408)
T ss_pred -------CCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCch-
Confidence 011 1112233334444444422 3567778888888888887641 122221 122234444443210
Q ss_pred hhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 420 MDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
......+.+.+.++|.++.. .+...+|++.. ...+++||+++++.++++.
T Consensus 352 -------------------------~~~a~~i~~~l~~~Gvlv~~----~g~~~lRl~Pp-l~it~eeid~~l~~l~~~l 401 (408)
T PRK04612 352 -------------------------AGQAGAILDLAAEHGLLLLQ----AGPDVLRFVPA-LNLTDAELADGLARLRLAL 401 (408)
T ss_pred -------------------------hhHHHHHHHHHHHCCeEEee----CCCCEEEEcCC-ccCCHHHHHHHHHHHHHHH
Confidence 12235677778888965432 24468999863 5567889999999998876
Q ss_pred Hh
Q 037144 500 EA 501 (502)
Q Consensus 500 ~~ 501 (502)
.+
T Consensus 402 ~~ 403 (408)
T PRK04612 402 AD 403 (408)
T ss_pred HH
Confidence 54
No 311
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.47 E-value=8.1e-12 Score=127.83 Aligned_cols=231 Identities=18% Similarity=0.201 Sum_probs=166.4
Q ss_pred HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCC
Q 037144 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRK 200 (502)
Q Consensus 121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~ 200 (502)
..+..++.||.+.++ ++++|.|.||...+.+... +++.|++....|-|+..+.-+.|+
T Consensus 75 Aqe~aA~~fgAd~ty--------FvvNGTS~ank~vi~a~~~-----------~GD~VLvdRN~HKSi~~glilaGa--- 132 (557)
T COG1982 75 AQELAARVFGADHTY--------FVVNGTSTANKAVINAVLT-----------PGDKVLVDRNCHKSIHHGLILAGA--- 132 (557)
T ss_pred HHHHHHHHhCCCceE--------EEECCccHHHHHHHHhhcC-----------CCCEEEecCCccHHHHHHHHHcCC---
Confidence 447789999998864 7788888899776666554 789999999999999999999999
Q ss_pred CEEEEecCCCC----CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccc
Q 037144 201 NIRAIKTTKSS----SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 276 (502)
Q Consensus 201 ~v~~v~~~~~~----~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~ 276 (502)
..+++....+. -+.++.+.+++++.+..... .++++|. .|..|..-++++|.+.++.+++|+.+|.+++...
T Consensus 133 ~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~---k~~vitn-pTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~ 208 (557)
T COG1982 133 TPVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAE---KLAVITN-PTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHF 208 (557)
T ss_pred ceEEecCCCCccccccCCCCHHHHHHHHHhChhhh---eeEEEec-CccceEeecHHHHHHHHhhcCceEEhhhcCcccc
Confidence 88888664432 26889999999987654321 2555555 4589999999999999999999999999998876
Q ss_pred ccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc-----hhhhhhh----cCCcccccCccCCCCCcccccCC
Q 037144 277 CICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP-----SCLLSTL----STNPQYLKNEATDQEPKEQEVGY 347 (502)
Q Consensus 277 ~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~-----~~l~~~~----~~~~~yl~~~~~~~~~~~~~~~~ 347 (502)
-.++..... .--..+|.++-|.||.+++-..++.+.+++. ..+.+++ +.+|.|.-.
T Consensus 209 ~~~~~l~~~-~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~-------------- 273 (557)
T COG1982 209 DFSPMLPES-ALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLM-------------- 273 (557)
T ss_pred cccccCcch-hhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHH--------------
Confidence 655433221 1113799999999999998888899998873 1111111 111112110
Q ss_pred CcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 037144 348 KDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR 405 (502)
Q Consensus 348 ~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~ 405 (502)
.++-+ +-+.. |+.-+++-++...+.++.+++...++++|+++.++
T Consensus 274 -----------ASlD~--Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~ 321 (557)
T COG1982 274 -----------ASLDV--ARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPE 321 (557)
T ss_pred -----------HHHHH--HHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecccc
Confidence 12222 11122 44445555888899999999999999899998765
No 312
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.46 E-value=3.1e-11 Score=124.96 Aligned_cols=310 Identities=10% Similarity=0.023 Sum_probs=160.2
Q ss_pred HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCC-CchhHHHHHHHcCC
Q 037144 119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQ-THCAFQKAAQIVGI 197 (502)
Q Consensus 119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~-~H~s~~~aa~~~Gl 197 (502)
.++.+.|++.+.-.+ ..+|++|||+|+..|+..+|... ++..|++... .|-.......+.+-
T Consensus 91 ~~lae~l~~~~~~~~--------~v~~~~sGseA~e~Alk~ar~~~---------gr~~ii~~~~~yhG~~~~~~~~~~~ 153 (423)
T TIGR00713 91 ILLAKEIISRVPSVE--------MVRFVNSGTEATMSAVRLARGYT---------GRDKIIKFEGCYHGHHDALLVKAGS 153 (423)
T ss_pred HHHHHHHHHhCCccc--------EEEEeCCHHHHHHHHHHHHHHhh---------CCCEEEEEcCCCCCChhhhhccccC
Confidence 345556666654322 58999999999999999998752 2334444433 44332222221111
Q ss_pred CCC----------------CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHH
Q 037144 198 DRK----------------NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCD 257 (502)
Q Consensus 198 g~~----------------~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~ 257 (502)
|.. .+..+| ..|+++|++++++. +..+.+|++....+++|.+-| +++|.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~ 223 (423)
T TIGR00713 154 GAATLGLPTSPGVPEDFAKLTLVLP-------YNDLEALEEVFEEY---GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRA 223 (423)
T ss_pred cccccCCCCCCCCCcccccceEEeC-------CCCHHHHHHHHHHc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHH
Confidence 100 111121 12899999998642 123445666533333788866 789999
Q ss_pred HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcc-cccCccC
Q 037144 258 VAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQ-YLKNEAT 336 (502)
Q Consensus 258 i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~-yl~~~~~ 336 (502)
+|++||+++++|.+|.++. ..........++ ..|.++ +.|.++..+..|+++.++. . .+.+..... +...
T Consensus 224 l~~~~~~llI~DEv~~g~r-~g~~~~~~~~~~-~pDi~t--~sK~l~~G~pig~v~~~~~-i-~~~~~~~~~~~~~~--- 294 (423)
T TIGR00713 224 LTEEYGSLLIFDEVMTGFR-VALGGAQEYFGV-EPDLTT--LGKIIGGGLPVGAFGGRRE-I-MERLAPEGPVYQAG--- 294 (423)
T ss_pred HHHHhCCEEEEEccccccc-cCcchhHHHhCC-Ccchhh--hhhhhcCCCceeeeeEHHH-H-HHhhCcCCCeeecc---
Confidence 9999999999999997663 211111111222 356554 6799986566788877533 2 223321100 1100
Q ss_pred CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEee
Q 037144 337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVT 415 (502)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~ 415 (502)
+. ++.+....+..++++.+..+ .++...+....+.+.|.+.+++. ++..-......++.+.+.
T Consensus 295 --------------T~-~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~~~v~~~ 358 (423)
T TIGR00713 295 --------------TL-SGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT-GIPHTVNRVGSMFSLFFT 358 (423)
T ss_pred --------------CC-CCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEeeccEEEEEEe
Confidence 00 11111223333445444322 23333344444455555555555 333211122344444443
Q ss_pred cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144 416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV 495 (502)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l 495 (502)
.....+. ......+ ......+.+.+.++|.+ +.+. +...+|++.. .++++|+++++.|
T Consensus 359 ~~~~~~~--------------~~~~~~~-~~~~~~~~~~l~~~Gv~-v~~~---~~~~~~l~~~---~t~~~i~~~~~~l 416 (423)
T TIGR00713 359 EEEVTNY--------------ADAKKSD-TELFAKFFHEMLDKGVF-LPPS---QFEACFLSAA---HTEEDIENTIEAA 416 (423)
T ss_pred cCCCCCh--------------hhhhccc-HHHHHHHHHHHHHCCeE-EecC---CccceeeECC---CCHHHHHHHHHHH
Confidence 2110000 0000000 12234677788888854 4432 2235787653 4677999999999
Q ss_pred HHHHHhC
Q 037144 496 QEHLEAF 502 (502)
Q Consensus 496 ~~~~~~~ 502 (502)
.++.+++
T Consensus 417 ~~~l~~~ 423 (423)
T TIGR00713 417 EEVFAEL 423 (423)
T ss_pred HHHHhhC
Confidence 9887653
No 313
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.46 E-value=4.7e-11 Score=117.24 Aligned_cols=293 Identities=14% Similarity=0.098 Sum_probs=177.6
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHHHH----
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQKAA---- 192 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~aa---- 192 (502)
..++.++|+++.+ ..+ .++|++||+|||-.|+..||.+.. +..+ -+|......|-.-.-+.
T Consensus 86 ~~~la~~L~~~s~-~~d-------~vff~NSGaEA~EaAiKlARk~~~------~~~k~~Iia~~nsFHGRT~galS~t~ 151 (404)
T COG4992 86 QAELAEKLVELSP-FAD-------RVFFCNSGAEANEAALKLARKYTG------DPEKSKIIAFENSFHGRTLGALSATG 151 (404)
T ss_pred HHHHHHHHHhhCc-ccc-------EEEEcCCcHHHHHHHHHHHHHHcC------CCCCcEEEEEcCCcCCccceeeeccC
Confidence 3456677788876 222 589999999999999999998743 1122 33444444553211111
Q ss_pred -----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhC
Q 037144 193 -----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFG 263 (502)
Q Consensus 193 -----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g 263 (502)
+-.+--...++.+|.+ |+++|+++|++++. .|++---.-..|.+-| ++++.++|++||
T Consensus 152 ~~ky~~~F~Pl~~g~~~vpfn-------Di~al~~ai~~~ta------AvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g 218 (404)
T COG4992 152 QPKYRKGFGPLLPGFRHVPFN-------DIEALEAAIDEDTA------AVIVEPIQGEGGVIPAPPEFLKALRELCDEHG 218 (404)
T ss_pred ChhhccCCCCCCCCceecCCC-------CHHHHHHHhccCeE------EEEEecccCCCCCCCCCHHHHHHHHHHHHHhC
Confidence 1111111245666653 89999999998664 6777665556677633 889999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
+.++.|..+.|.-.-..-+..-..++ ..|.+++. |.++..++.|.++.+ .... ..++.. --.+
T Consensus 219 ~LLI~DEVQtG~GRTGk~fA~e~~gV-~PDI~tla--K~LgGG~PigA~la~-~~~~-~~~~~G--~HgS---------- 281 (404)
T COG4992 219 ALLILDEVQTGLGRTGKLFAYEHYGV-EPDILTLA--KALGGGFPIGAMLAT-EEIA-SAFTPG--DHGS---------- 281 (404)
T ss_pred eEEEEeccccCCCccchHHHHHHhCC-CCCEEEee--ccccCCccceeeEEc-hhhh-hcCCCC--cccC----------
Confidence 99999999977643222222111233 57888876 999888889999887 3211 111110 0000
Q ss_pred ccCCCcccccCCCCCCchHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--CeeEEEEEeecC
Q 037144 344 EVGYKDWQITLCRRFRSLKLW---VVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAFPR--NFSLVCFRVTPS 417 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~~~--~~~~v~f~~~~~ 417 (502)
|+ ++ .+++.. ++++.+-.+ ++.++..++.++|.++|+++. .+.++... ..-++-+.+.+.
T Consensus 282 -------Tf-GG---NpLacAv~~a~l~~l~~e---~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~ 347 (404)
T COG4992 282 -------TF-GG---NPLACAVALAVLEVLLEE---GLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEP 347 (404)
T ss_pred -------CC-Cc---CHHHHHHHHHHHHHHcch---hHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCc
Confidence 00 12 334443 344444443 456667778888888887752 22233221 122344444332
Q ss_pred cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144 418 AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~ 497 (502)
. ....+.+.+.++|.+.... +..++|+... ...++++|+.+++++++
T Consensus 348 ~----------------------------~a~~~~~~~~~~gvL~~~a----~~~ViR~~Pp-L~i~~eei~~~~~~l~~ 394 (404)
T COG4992 348 Y----------------------------RARDIVRALREEGVLVLPA----GPNVIRFLPP-LVITEEEIDEALDALER 394 (404)
T ss_pred c----------------------------cHHHHHHHHHHCCeEEecC----CCCeEEecCC-ccCCHHHHHHHHHHHHH
Confidence 0 1356777888889654333 3449999863 56788899999999998
Q ss_pred HHHh
Q 037144 498 HLEA 501 (502)
Q Consensus 498 ~~~~ 501 (502)
+++.
T Consensus 395 ~l~~ 398 (404)
T COG4992 395 ALAA 398 (404)
T ss_pred HHHH
Confidence 8764
No 314
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.45 E-value=1.8e-10 Score=119.23 Aligned_cols=315 Identities=10% Similarity=0.051 Sum_probs=168.7
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI 197 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl 197 (502)
..++.+.+.+..+.+.. ...+|+++|++|+..|+..+|... + ++.+|.++...|....-+....+-
T Consensus 86 ~~~la~~l~~~~~~~~~------~~~~f~~sGsea~e~Alklar~~~-~-------r~~iv~~~~~yHG~~~~~~~~~~~ 151 (425)
T PRK08088 86 YLELCEKMNQKVPGDFA------KKTLLVTTGSEAVENAVKIARAAT-K-------RSGVIAFTGAYHGRTHYTLALTGK 151 (425)
T ss_pred HHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHHh-C-------CCeEEEECCccCCccHHHHHhhCC
Confidence 34677778887764321 157899999999999999998642 1 334555566566554333332221
Q ss_pred --------C--CCCEEEEecCCCCCcccC----HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHH
Q 037144 198 --------D--RKNIRAIKTTKSSSYGLS----AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVA 259 (502)
Q Consensus 198 --------g--~~~v~~v~~~~~~~~~~d----~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~ 259 (502)
+ ...+..++...+.+ .++ ++.|++++++.. .+..+.+|++.......|.+-+ +++|.++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~~l~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~ 229 (425)
T PRK08088 152 VNPYSAGMGLMPGHVYRALYPCPLH-GVSEDDAIASIERIFKNDA-APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALC 229 (425)
T ss_pred CCccccCCCCCCCCcEEcCCCcccc-CccHHHHHHHHHHHHHhcc-CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHH
Confidence 0 11122222211111 122 456887775321 2234556666665555566655 99999999
Q ss_pred HHhCCEEEeecccccccccCccchhh-hcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCC
Q 037144 260 KQFGIWVHVDAAYAGSACICPEFRHF-IDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQ 338 (502)
Q Consensus 260 ~~~g~~lhVDaA~g~~~~~~~~~~~~-~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~ 338 (502)
++||+++++|.+|++.... ...... ..++ ..|. .++.|.++..+..|+++.+.. . .+.+.... +..
T Consensus 230 ~~~~~~lI~Dev~~g~g~~-g~~~~~~~~~~-~pdi--~s~sK~l~~G~rig~v~~~~~-~-~~~~~~~~-~~~------ 296 (425)
T PRK08088 230 DEHGIMLIADEVQTGAGRT-GTLFAMEQMGV-AADL--TTFAKSIAGGFPLAGVTGRAE-V-MDAIAPGG-LGG------ 296 (425)
T ss_pred HHcCCEEEEeccccCCCcC-cchhHHhhcCC-CCCE--EEEeccccCCCcceeeEecHH-H-HhhcCCCC-CCC------
Confidence 9999999999999864322 111110 1122 3454 455799986677888887432 2 22221110 000
Q ss_pred CCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEecCCCeeEEEEEe
Q 037144 339 EPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT----SDKRFEVAFPRNFSLVCFRV 414 (502)
Q Consensus 339 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~----~~~~~~l~~~~~~~~v~f~~ 414 (502)
+.. ...+...+++..+..-...+++++..++.+++++.|. +.|.+.-+..+ ..++.+.+
T Consensus 297 ------------t~~----~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~~~l~l 359 (425)
T PRK08088 297 ------------TYA----GNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL-GAMIAIEL 359 (425)
T ss_pred ------------CCC----cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceEEEEEE
Confidence 000 1223333333333211223444555555555555553 34443323222 33445555
Q ss_pred ecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHH
Q 037144 415 TPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTV 494 (502)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~ 494 (502)
....... .. .......+.+++.++|.++.+...+ ..++|+++. ...++++|++.++.
T Consensus 360 ~~~~~~~------------------~p--~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~iRl~~~-~~~t~~ei~~~i~~ 416 (425)
T PRK08088 360 FEDGDHS------------------KP--NAKLTAQIVARARDKGLILLSCGPY--YNVLRILVP-LTIEDAQIRQGLEI 416 (425)
T ss_pred ecCCCCC------------------CC--CHHHHHHHHHHHHhCCCEEecCCCC--CCEEEEECC-CCcCHHHHHHHHHH
Confidence 3210000 00 0233567888888889765433222 367999985 34567799999999
Q ss_pred HHHHHHh
Q 037144 495 VQEHLEA 501 (502)
Q Consensus 495 l~~~~~~ 501 (502)
|.++.++
T Consensus 417 l~~~l~~ 423 (425)
T PRK08088 417 IAQCFDE 423 (425)
T ss_pred HHHHHHh
Confidence 9988764
No 315
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.43 E-value=7.3e-10 Score=115.10 Aligned_cols=320 Identities=11% Similarity=0.058 Sum_probs=171.8
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHHH
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQI 194 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~~ 194 (502)
+...++.+.|.+++..... ...+|+++||+|+..|+..||... ++..|+ .....|-...-+..+
T Consensus 99 ~~~~~la~~l~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t---------gr~~ii~~~~~yHG~t~~al~~ 163 (443)
T PRK06058 99 EGYVAVAEQLNRLTPGDHE------KRSALFNSGAEAVENAVKIARSYT---------GRQAVVVFDHAYHGRTNLTMAL 163 (443)
T ss_pred HHHHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHhh---------CCCeEEEECCCcCcChHHHHhh
Confidence 4555677888887743211 147899999999999999998752 233344 444445444344333
Q ss_pred cCC--------C--CCCEEEEecCCCCC----cccCH-HHHHHHHHHHHh--cCCccEEEEEecCCccccccCC----hh
Q 037144 195 VGI--------D--RKNIRAIKTTKSSS----YGLSA-ESVLSQINLDVE--AELIPLFLCATVGTTAITAVDP----LK 253 (502)
Q Consensus 195 ~Gl--------g--~~~v~~v~~~~~~~----~~~d~-~~Le~~i~~~~~--~g~~p~~Vv~t~gtt~~G~idp----l~ 253 (502)
.+. + ...+..+|....-+ ...+. +.+++.++.-.+ .+..+.+|++.......|.+-| ++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~ 243 (443)
T PRK06058 164 TAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLP 243 (443)
T ss_pred cCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHH
Confidence 221 1 11234444211000 00111 222222221111 1233556666554444566644 99
Q ss_pred HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccC
Q 037144 254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKN 333 (502)
Q Consensus 254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~ 333 (502)
+|.++|++||+.+++|.++.|+......+.....++ ..|.++++ |.++..+..|.++.++. . .+.+... ....
T Consensus 244 ~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv-~PDiv~~g--K~l~~G~Pi~av~~~~~-i-~~~~~~~--~~~~ 316 (443)
T PRK06058 244 ALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGI-VPDLITTA--KGIAGGLPLSAVTGRAE-I-MDAPHPG--GLGG 316 (443)
T ss_pred HHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCC-CCCEEEEc--ccccCCCccEEEEEcHH-H-HhhccCC--CCCC
Confidence 999999999999999999977543222111111234 47888885 99987777888887643 2 2222111 0000
Q ss_pred ccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEec--CCCeeEE
Q 037144 334 EATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAF--PRNFSLV 410 (502)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~--~~~~~~v 410 (502)
|. .+.+....+..++++.+..+ ++.++..++.++|.++|+++. ...++. .....++
T Consensus 317 -----------------T~-~gnpl~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~ 375 (443)
T PRK06058 317 -----------------TY-GGNPVACAAALAAIETIEED---DLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMI 375 (443)
T ss_pred -----------------CC-CCCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEE
Confidence 10 11111222333344433232 456777777888888886631 122221 2233445
Q ss_pred EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHH
Q 037144 411 CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRA 490 (502)
Q Consensus 411 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~ 490 (502)
.+.+.+... . ....++...+.+.+.++|.++.....+ ..+||+... ...++++|++
T Consensus 376 ~i~~~~~~~--------------------~-~~~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~lr~~Pp-l~~t~~~i~~ 431 (443)
T PRK06058 376 AIELVKPGT--------------------T-EPDAELTKALAAAAHAAGVIVLTCGTY--GNVIRLLPP-LVIGDELLRE 431 (443)
T ss_pred EEEEecCCC--------------------C-CCcHHHHHHHHHHHHHCCeEEeccCCC--CCEEEEECC-CccCHHHHHH
Confidence 555533210 0 000234567788888889754332221 248999764 4467789999
Q ss_pred HHHHHHHHHHhC
Q 037144 491 AWTVVQEHLEAF 502 (502)
Q Consensus 491 ~~~~l~~~~~~~ 502 (502)
++++|+++.+++
T Consensus 432 ~~~~l~~~l~~~ 443 (443)
T PRK06058 432 GLDVLEAALADL 443 (443)
T ss_pred HHHHHHHHHHhC
Confidence 999999987754
No 316
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.43 E-value=3.3e-10 Score=116.57 Aligned_cols=315 Identities=10% Similarity=0.053 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ 193 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~ 193 (502)
++...++.+.|.+++..|... ....+| +++||+|+..|++.||... + +..+|......|-...-+..
T Consensus 77 ~~~~~~lae~l~~~~~~~~~~----~~~~~f~~~sGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~als 144 (412)
T TIGR02407 77 TEAKREFLETFNEIILKPRGL----DYKVQFPGPTGTNAVESALKLARKVT----G----RSNVVSFTNAFHGMTLGSLS 144 (412)
T ss_pred cHHHHHHHHHHHHhccCccCC----CceEEEeCCCchHHHHHHHHHHhhhc----C----CCeEEEECCCcCCchHHHHH
Confidence 445556777777765323211 002445 5899999999999998751 1 22234444445544333333
Q ss_pred HcCC-------C--CCCEEEEecCCCCCc-ccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc----CChhHHHHHH
Q 037144 194 IVGI-------D--RKNIRAIKTTKSSSY-GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV----DPLKPLCDVA 259 (502)
Q Consensus 194 ~~Gl-------g--~~~v~~v~~~~~~~~-~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i----dpl~eI~~i~ 259 (502)
..|. | ...+..+|.....+. .-+++.+++.+.+.......+.+|++.......|.+ +-+++|.++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc 224 (412)
T TIGR02407 145 VTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLC 224 (412)
T ss_pred hcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHH
Confidence 3221 1 123455554210000 124777888886432111234566665555556664 4489999999
Q ss_pred HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCC-CCcceEEEeeCchhhhhhhcCCcccccCccCCC
Q 037144 260 KQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQ 338 (502)
Q Consensus 260 ~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~ 338 (502)
++||+++++|.++.|+......+.....++ ..|.++++ |+++. .+..|++++++.. +.+. ......
T Consensus 225 ~~~g~llI~DEV~tG~GRtG~~~a~~~~~v-~PDi~~~~--K~lg~~G~pigav~~~~~~---~~~~--~~~~~~----- 291 (412)
T TIGR02407 225 RRHDILLIVDDIQAGCGRTGTFFSFEPAGI-EPDIVCLS--KSISGYGLPLALTLIKPEL---DVWK--PGEHNG----- 291 (412)
T ss_pred HHcCCEEEEechhhCCCccchhHHhcccCC-CCCEEEec--hhccCCccceeEEEEchhh---hccC--CCccCC-----
Confidence 999999999999976532211111111233 57888765 99976 6778999886542 2221 000000
Q ss_pred CCcccccCCCcccccCCCCCCchHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeEEEEE
Q 037144 339 EPKEQEVGYKDWQITLCRRFRSLKLWVVIRN-FGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNFSLVCFR 413 (502)
Q Consensus 339 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~-~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~~~v~f~ 413 (502)
++ .+.+.......++++. +..+ ++.++..++.++|+++|++ .|++..-......++.+.
T Consensus 292 ------------T~-~gnpl~~aaa~a~l~~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~ 355 (412)
T TIGR02407 292 ------------TF-RGNNLAFVTATAALEYYWSDD---AFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIE 355 (412)
T ss_pred ------------CC-CccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEE
Confidence 11 0111111233445553 3333 3445555666666666543 443321111122344555
Q ss_pred eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHH
Q 037144 414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWT 493 (502)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~ 493 (502)
+.+ ......+.+.+.++|.++. +.. .+...||++.. ...+++|++++++
T Consensus 356 l~~----------------------------~~~~~~~~~~~~~~Gv~v~-~~~-~~~~~lr~~p~-l~~t~~~i~~~~~ 404 (412)
T TIGR02407 356 CGD----------------------------GDLAGKIAKAAFENGLIIE-TSG-PNDEVIKLLPP-LTIDEETLQQGLD 404 (412)
T ss_pred ecC----------------------------hHHHHHHHHHHHHCCCEEe-ccC-CCCCEEEEECC-CCCCHHHHHHHHH
Confidence 532 1234577888888897543 221 12357999874 5577789999999
Q ss_pred HHHHHHHh
Q 037144 494 VVQEHLEA 501 (502)
Q Consensus 494 ~l~~~~~~ 501 (502)
.|.++.++
T Consensus 405 ~l~~~l~~ 412 (412)
T TIGR02407 405 ILEQAVEE 412 (412)
T ss_pred HHHHHHhC
Confidence 99988753
No 317
>PRK06541 hypothetical protein; Provisional
Probab=99.43 E-value=4.9e-10 Score=116.51 Aligned_cols=330 Identities=11% Similarity=0.046 Sum_probs=175.9
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+...++.+.|.+++.-+- ...+|+++||+|+..|+..||..... .|..+ +..+|......|-...-+....
T Consensus 95 ~~~~~la~~l~~~~p~~~-------~~v~f~~sGseAve~AlklAr~~~~~-~g~~~-r~~ii~~~~~yHG~t~~a~s~~ 165 (460)
T PRK06541 95 PPAIELAERLAALAPGDL-------NRVFFTTGGSEAVESAWKLAKQYFKL-TGKPG-KHKVISRAIAYHGTTQGALAIT 165 (460)
T ss_pred HHHHHHHHHHHHhCCCCc-------CEEEEcCCcHHHHHHHHHHHHHHHHh-cCCCC-ccEEEEEcCcccCcchhhhcCc
Confidence 334456677777753221 15799999999999999999875321 11111 2234444444554433333332
Q ss_pred CCC---------CCCEEEEecCCCCC---cccC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144 196 GID---------RKNIRAIKTTKSSS---YGLS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---- 251 (502)
Q Consensus 196 Glg---------~~~v~~v~~~~~~~---~~~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---- 251 (502)
|.. ...+..+|....-. +.-+ ++.|++.++.. ....+.+|++....+..|.+-|
T Consensus 166 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~Aavi~EPv~g~~G~~~~~~~y 243 (460)
T PRK06541 166 GLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE--GPDTVAAVFLEPVQNAGGCFPPPPGY 243 (460)
T ss_pred CChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHH
Confidence 221 11234444321000 1112 35667666532 1233556666666777888888
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCc-c
Q 037144 252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNP-Q 329 (502)
Q Consensus 252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~-~ 329 (502)
+++|.++|++||+++++|.++.|+......+.....++ ..|.+++ .|.++..+ ..|.++.+++. . +.+.... .
T Consensus 244 l~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv-~PDivt~--gK~l~~G~~pigav~~~~~i-~-~~~~~~~~~ 318 (460)
T PRK06541 244 FERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGY-VPDIITC--AKGITSGYSPLGAMIASDRL-F-EPFLDGPTM 318 (460)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCC-CCCEEEe--cccccCCccceeEEEEcHHH-H-HHhhcCCCc
Confidence 99999999999999999999965532222111111233 5788774 69888654 57888776442 2 2232111 1
Q ss_pred cccCccCCCCCcccccCCCcccccCCCCCCchHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--C
Q 037144 330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV---VIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF--P 404 (502)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~--~ 404 (502)
++... |. ...++.+.+ +++.+..+ .+.++..++.++|.+.|+++....++. .
T Consensus 319 ~~~~~----------------T~----~gnp~~~aaala~l~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~v~~vr 375 (460)
T PRK06541 319 FLHGY----------------TF----GGHPVSAAVALANLDIFERE---GLLDHVRDNEPAFRATLEKLLDLPIVGDVR 375 (460)
T ss_pred cccCC----------------CC----CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence 11100 00 112333333 34443333 456778888899998887763222211 1
Q ss_pred CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCc
Q 037144 405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTM 484 (502)
Q Consensus 405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~ 484 (502)
....++.+.+...... . .+. . +..........+.+.+.++|.+. .+. ..+..+||++.. ...+
T Consensus 376 g~Gl~~~ie~~~~~~~-----------~-~~~-~-~~~~~~~~~~~~~~~l~~~Gi~~-~~~-~~g~~~lrl~Pp-l~~t 438 (460)
T PRK06541 376 GDGYFYGIELVKDKAT-----------K-ETF-T-DDESERLLRGFLSPALFEAGLYC-RAD-DRGDPVVQLAPP-LISG 438 (460)
T ss_pred ecceEEEEEEecCccc-----------c-cCC-c-chhhhhhHHHHHHHHHHhCCeEE-Eec-CCCCCEEEEECC-CCCC
Confidence 2223444444321000 0 000 0 00000112235677888888643 331 124468999875 4467
Q ss_pred HHHHHHHHHHHHHHHHh
Q 037144 485 ESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 485 ~~di~~~~~~l~~~~~~ 501 (502)
++|||++++++.++.++
T Consensus 439 ~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 439 QEEFDEIEQILRSVLTE 455 (460)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77999999999988754
No 318
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.42 E-value=7.9e-10 Score=114.06 Aligned_cols=314 Identities=12% Similarity=0.064 Sum_probs=171.1
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCe-EEEeCCCCchhHHHHHHHcC
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKL-VVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~aa~~~G 196 (502)
..++.+.|.+++..+.. ...+|+++||+|+..|++.||... ++. +|......|-...-+..+.|
T Consensus 85 ~~~la~~l~~~~p~~~~------~~~~f~~sGseA~e~AlklAr~~t---------gr~~ii~~~~~yHG~t~~~~s~t~ 149 (421)
T PRK06777 85 YVTLAERINALAPIDGP------AKTAFFTTGAEAVENAVKIARAYT---------GRPGVIAFGGAFHGRTLLTMALTG 149 (421)
T ss_pred HHHHHHHHHHhCCCCCC------ceEEEeCCcHHHHHHHHHHHHHhh---------CCCeEEEEcCCcCCccHHHHhhcC
Confidence 34566777777643211 157899999999999999998752 223 33344445544333333333
Q ss_pred C--------C--CCCEEEEecCCCCCc---ccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-CC---hhHHHHHH
Q 037144 197 I--------D--RKNIRAIKTTKSSSY---GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-DP---LKPLCDVA 259 (502)
Q Consensus 197 l--------g--~~~v~~v~~~~~~~~---~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-dp---l~eI~~i~ 259 (502)
. + ...+..+|......+ .-+++.+++.+++.. .+..+.+|++.......|.. -| +++|.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc 228 (421)
T PRK06777 150 KVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLC 228 (421)
T ss_pred CCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHH
Confidence 1 0 012333333211000 123667777775321 12234566666555556643 33 99999999
Q ss_pred HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCC
Q 037144 260 KQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE 339 (502)
Q Consensus 260 ~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 339 (502)
++||+++++|.+|.++......+.....++ ..|.++ ..|.++..+..|+++.++. . .+.+.... ...
T Consensus 229 ~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~pDiv~--~sK~l~~G~pigav~~~~~-i-~~~~~~~~--~~~------ 295 (421)
T PRK06777 229 DEHGILLIADEVQTGFARTGKLFAMEYYDV-KPDLIT--MAKSLGGGMPISAVVGRAE-V-MDAPAPGG--LGG------ 295 (421)
T ss_pred HHcCCEEEEechhhCCccCCchhhhhhcCC-CCCEEe--eehhhcCCCceEEEEEcHH-H-HhccCCCC--CCC------
Confidence 999999999999987533221111001122 467665 5699886677888887532 2 22222110 000
Q ss_pred CcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeEEEEEee
Q 037144 340 PKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFPRNFSLVCFRVT 415 (502)
Q Consensus 340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~~~~~~v~f~~~ 415 (502)
++ ++.+....+..++|..+.. .++.++..++.++|++.|+++ |.+.-+ .+...++.+.+.
T Consensus 296 -----------T~-~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rg~G~~~~i~~~ 359 (421)
T PRK06777 296 -----------TY-AGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEKAKASCPAIVDI-RARGSMVAVEFN 359 (421)
T ss_pred -----------CC-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-cCceEEEEEEEe
Confidence 11 1111122233334443322 456777888888888888764 433323 334444444443
Q ss_pred cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144 416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV 495 (502)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l 495 (502)
.... .....++...+.+++.++|.++.+...+ + .++|++.. ...++++++++++.|
T Consensus 360 ~~~~---------------------~~~~~~~~~~l~~~~~~~Gv~i~~~~~~-g-~~lr~~pp-l~i~~~~i~~~~~~l 415 (421)
T PRK06777 360 DPQT---------------------GKPSPEFTRQYQRQALEEGLLLLSCGVH-G-NVIRFLYP-LTIPDAQFSKALNIL 415 (421)
T ss_pred cCcc---------------------CCccHHHHHHHHHHHHhCCeEEeecCCC-C-CEEEEeCC-CCCCHHHHHHHHHHH
Confidence 2100 0001234567777788888654333222 2 48999863 346788999999999
Q ss_pred HHHHH
Q 037144 496 QEHLE 500 (502)
Q Consensus 496 ~~~~~ 500 (502)
.+.+.
T Consensus 416 ~~~l~ 420 (421)
T PRK06777 416 TRLLA 420 (421)
T ss_pred HHHHh
Confidence 88754
No 319
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.42 E-value=7.1e-10 Score=114.56 Aligned_cols=312 Identities=13% Similarity=0.077 Sum_probs=169.5
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC-
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG- 196 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G- 196 (502)
+.++.+.|.+++.-... ...+|+++||+|+..|+..||... + ++.+|......|-...-+..+.|
T Consensus 78 ~~~la~~l~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~~~~~~~~ 143 (420)
T TIGR00700 78 YVALAEKLNRIAPGSGP------KKSVFFNSGAEAVENAVKIARSYT----G----RPGVVAFDHGFHGRTNMTMALTAK 143 (420)
T ss_pred HHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHhc----C----CCcEEEECCCcCCCcHHHHHhcCC
Confidence 34566777777632111 157999999999999999998752 1 22244445555644333333322
Q ss_pred -------CC--CCCEEEEecCCCC---------CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhH
Q 037144 197 -------ID--RKNIRAIKTTKSS---------SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKP 254 (502)
Q Consensus 197 -------lg--~~~v~~v~~~~~~---------~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~e 254 (502)
.+ ...+..+|..... .+.-+++.+++.+.... .+....+|++......+|.+-| +++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~Epi~g~~G~~~~~~~~l~~ 222 (420)
T TIGR00700 144 VMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDV-GANNVAALVIEPVQGEGGFIVPAKGFVPA 222 (420)
T ss_pred CcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhc-CCCcEEEEEECCccCCCCCccCCHHHHHH
Confidence 11 1134444432100 00112556776664211 2234567777665556677655 999
Q ss_pred HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCc
Q 037144 255 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNE 334 (502)
Q Consensus 255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~ 334 (502)
|.++|++||+++++|.+|.++.....-+.....++ ..|.++ +.|.++..+..|+++.++. . .+.+... ....
T Consensus 223 l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~-~pDi~~--lsK~l~~G~pig~v~~~~~-i-~~~~~~~--~~~~- 294 (420)
T TIGR00700 223 LLDWCREHGIVFIADEVQTGFARTGAMFACEHEGP-EPDLIT--TAKSLADGLPLSGVTGRAE-I-MDAPAPG--GLGG- 294 (420)
T ss_pred HHHHHHHcCCEEEEEecccCCcccchhHHHhhcCC-CCCEEE--eeccccCCcceEEEEecHH-H-HhhcCCC--CcCC-
Confidence 99999999999999999987643221111001122 577666 5699987778888887543 2 2222111 0100
Q ss_pred cCCCCCcccccCCCcccccCCCCCCchHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEecCCCe
Q 037144 335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLWVV---IRNFGVANLRNFIRSHVGMAKLFERLVT----SDKRFEVAFPRNF 407 (502)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~---l~~~g~~g~~~~~~~~~~la~~l~~~l~----~~~~~~l~~~~~~ 407 (502)
++ ++ .++...++ ++.+..+.+ .++..++.+++++.|+ +.|.+..+ .+..
T Consensus 295 ----------------T~-~~---~pl~~aaa~a~l~~l~~~~~---~~~~~~~g~~l~~~L~~l~~~~~~~~~v-rg~G 350 (420)
T TIGR00700 295 ----------------TY-AG---NPLACAAALAVLAIIESEGL---IERARQIGRLVTDRLTTLKAVDPRIGDV-RGLG 350 (420)
T ss_pred ----------------CC-Cc---CHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHhhCCCEEEe-eccc
Confidence 11 11 23433334 544444333 3444444555555554 34444333 2334
Q ss_pred eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144 408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH 487 (502)
Q Consensus 408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d 487 (502)
.++.+.+.+... ......+...+.+.+.++|..+.+...+ ..++|++... ..++++
T Consensus 351 ~~~~i~~~~~~~---------------------~~~~~~~~~~l~~~~~~~Gv~i~p~~~f--~~~lRl~p~l-~~~~~~ 406 (420)
T TIGR00700 351 AMIAVELVDPGT---------------------TEPDAGLAERIATAAHAAGLLLLTCGMF--GNIIRFLPPL-TIGDEL 406 (420)
T ss_pred eEEEEEEecCCC---------------------CCccHHHHHHHHHHHHHCCeEEeccCCC--CCEEEEECCC-CcCHHH
Confidence 455555432110 0001234567888888889765443322 2589998642 246779
Q ss_pred HHHHHHHHHHHHH
Q 037144 488 VRAAWTVVQEHLE 500 (502)
Q Consensus 488 i~~~~~~l~~~~~ 500 (502)
|+++++.|.+++.
T Consensus 407 l~~~~~~l~~~l~ 419 (420)
T TIGR00700 407 LSEGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988764
No 320
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.42 E-value=9.6e-10 Score=113.92 Aligned_cols=317 Identities=14% Similarity=0.055 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+.+.++.+.|.++++...+ ..+|+++||+|+..|+..||... + +..++-.....|-...-+....
T Consensus 84 ~~~~~la~~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~t----g----r~~ii~~~~~yHG~t~~a~s~~ 148 (443)
T PRK08360 84 VEPLLLAEKLIEIAPGDNP-------KVSFGLSGSDANDGAIKFARAYT----K----RRKILSYLRSYYGSTYGAMSLT 148 (443)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEcCCHHHHHHHHHHHHHHhc----C----CCeEEEEeCCcCCcCHHHHHhc
Confidence 3445667778887654322 58999999999999999998752 1 2223333334454333333333
Q ss_pred CCC---------CCCEEEEecCCCCC--cc--------cCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----h
Q 037144 196 GID---------RKNIRAIKTTKSSS--YG--------LSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----L 252 (502)
Q Consensus 196 Glg---------~~~v~~v~~~~~~~--~~--------~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l 252 (502)
|.. ...+..+|...... +. -+++.++++++... .+..+.+|++.-..+++|.+-| +
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iAAvi~eP~~~~~G~~~~~~~~l 227 (443)
T PRK08360 149 GLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEV-YAEGVAALFAEPIQGDAGMIVPPEDYF 227 (443)
T ss_pred CCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhcc-CCCCeEEEEECCccCCCCCcCCCHHHH
Confidence 321 11344554431000 00 12345556664321 1234567777766678887755 8
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCccccc
Q 037144 253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLK 332 (502)
Q Consensus 253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~ 332 (502)
++|.++|++||+++++|.+|.++......+.....++ ..|.+++ .|.++..+..|+++.++. . .+.+... .+..
T Consensus 228 ~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~-~pDiitl--sK~l~~G~pigav~~~~~-i-~~~~~~~-~~~~ 301 (443)
T PRK08360 228 KKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGV-EPDIITL--GKPLGGGLPISATIGRAE-I-MDSLPPL-AHAF 301 (443)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCC-CCCEEEe--cccccCCceeEEEEEcHH-H-HhhhcCC-CCCC
Confidence 9999999999999999999987533221111111133 4577766 799986667888877533 2 2233211 0100
Q ss_pred CccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEec--CCCeeE
Q 037144 333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAF--PRNFSL 409 (502)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~--~~~~~~ 409 (502)
+.. +.+.......++++.+..+ ++.++..++.++|++.|+++ ..+.++. .....+
T Consensus 302 ------------------T~~-~~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~ 359 (443)
T PRK08360 302 ------------------TLS-GNPVASAAALAVIEEIEEK---NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLM 359 (443)
T ss_pred ------------------CCC-cCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceE
Confidence 110 1111223334445444332 35667777777777777653 1111221 122234
Q ss_pred EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144 410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR 489 (502)
Q Consensus 410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~ 489 (502)
+.+.+....... .. .......+.+++.++|.++ .+. +...+|++.. ...+++||+
T Consensus 360 ~gie~~~~~~~~------------------~~--~~~~~~~~~~~l~~~Gi~~-~~~---~~~~lr~~P~-l~~t~~~id 414 (443)
T PRK08360 360 IGVDLVKDRETK------------------ER--AYEEAAKVVWRAWELGLIV-TFF---SGNVLRIQPP-LTIEKEVLD 414 (443)
T ss_pred EEEEEecCCccc------------------Cc--cHHHHHHHHHHHHHCCeEE-eec---CCCEEEEeCC-CCCCHHHHH
Confidence 444443211000 00 0122456777888889643 321 2357999864 456778999
Q ss_pred HHHHHHHHHHHh
Q 037144 490 AAWTVVQEHLEA 501 (502)
Q Consensus 490 ~~~~~l~~~~~~ 501 (502)
++++.+.++.++
T Consensus 415 ~~~~~l~~~l~~ 426 (443)
T PRK08360 415 EGLDILEEAIED 426 (443)
T ss_pred HHHHHHHHHHHH
Confidence 999999987653
No 321
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.41 E-value=2.4e-10 Score=118.19 Aligned_cols=312 Identities=12% Similarity=0.061 Sum_probs=168.5
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
..+.++.++|.+++.-. ...+++.||++||..|+..++... + +..+|......|-...-+....
T Consensus 90 ~~~~~la~~L~~~~~~~--------~~v~~~~sGseA~e~Aik~a~~~~----g----~~~ii~~~~~yHG~t~~~~~~~ 153 (426)
T PRK00062 90 ELEVELAELVIELVPSI--------EMVRMVNSGTEATMSAIRLARGYT----G----RDKIIKFEGCYHGHADSLLVKA 153 (426)
T ss_pred HHHHHHHHHHHHhCCCC--------CEEEEecCHHHHHHHHHHHHHHHh----C----CCeEEEEcCccCCchhhhhhcc
Confidence 34456777777776311 157999999999999999998751 1 2334444554564432222221
Q ss_pred CCC-----CC----CEE-----EEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHH
Q 037144 196 GID-----RK----NIR-----AIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCD 257 (502)
Q Consensus 196 Glg-----~~----~v~-----~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~ 257 (502)
|-+ .. ..+ .+... .-|+++|++.+.+. +..+.+|++.......|.+-| +++|.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~ 225 (426)
T PRK00062 154 GSGAATLGLPDSPGVPEDFAKHTLTAP-----YNDLEAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRE 225 (426)
T ss_pred CccccccCCCCCCCCCcccccceEEcC-----CCCHHHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHH
Confidence 210 00 000 11111 13789999988642 223456777766667898887 999999
Q ss_pred HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCC-cccccCccC
Q 037144 258 VAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTN-PQYLKNEAT 336 (502)
Q Consensus 258 i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~~~~~ 336 (502)
+|++||+++++|.+|.|+ ...........++ ..|.++ ..|.++..+..|+++.+ +.. .+.+... ..+....
T Consensus 226 l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~-~pDi~~--~gK~l~~G~p~ga~~~~-~~i-~~~~~~~~~~~~~~T-- 297 (426)
T PRK00062 226 LCDEHGALLIFDEVMTGF-RVALGGAQGYYGV-TPDLTT--LGKIIGGGLPVGAFGGR-REI-MEQLAPLGPVYQAGT-- 297 (426)
T ss_pred HHHHcCCEEEEeechhcc-ccCCccHHHHhCC-CcchHh--hhhHhhCCCcceeeeEH-HHH-HHhhccCCCceeccc--
Confidence 999999999999999765 3221111111122 356544 46998765667777654 332 2333211 1111110
Q ss_pred CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeEEEE
Q 037144 337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNFSLVCF 412 (502)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~~~v~f 412 (502)
. ++.+....++.+++..+..+ +..++..++.+++++.|++ .+ +..-......++.+
T Consensus 298 ---------------~-~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~vrg~G~~~~i 357 (426)
T PRK00062 298 ---------------L-SGNPLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKEAAKKAG-IPLTVNRVGSMFGL 357 (426)
T ss_pred ---------------C-cCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEecceEEE
Confidence 0 11122233444455554332 3556666667777666653 33 33211233445555
Q ss_pred EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHH
Q 037144 413 RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAW 492 (502)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~ 492 (502)
.+.+..... . .... .........+.+.+.++|.+ +.+.. ...+|++. ..++++|++++
T Consensus 358 ~l~~~~~~~----------~----~~~~-~~~~~~~~~i~~~l~~~Gv~-v~~~~---~~~~~~~~---~~t~~ei~~~~ 415 (426)
T PRK00062 358 FFTDEPVTN----------Y----ADAK-KSDTERFARFFHAMLDEGVY-LAPSQ---FEAGFVSA---AHTDEDIEKTL 415 (426)
T ss_pred EEecCCCcc----------h----hhhc-cccHHHHHHHHHHHHHCCeE-eecCC---cCceeeec---cCCHHHHHHHH
Confidence 554321000 0 0000 00023345778888888864 43322 12456553 34777999999
Q ss_pred HHHHHHHHh
Q 037144 493 TVVQEHLEA 501 (502)
Q Consensus 493 ~~l~~~~~~ 501 (502)
+.++++.++
T Consensus 416 ~~l~~~l~~ 424 (426)
T PRK00062 416 EAARKAFAA 424 (426)
T ss_pred HHHHHHHHh
Confidence 999988765
No 322
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.41 E-value=1.3e-09 Score=112.96 Aligned_cols=315 Identities=10% Similarity=0.040 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+.+.++.+.|.+++.-+.. ...+|++|||+|+..|+..||... + +..+|......|-...-+..+.
T Consensus 97 ~~~~~lAe~L~~~~p~~~~------~~v~f~~SGsEA~e~AlklAr~~t----g----r~~Ii~~~~~yHG~t~~~ls~t 162 (441)
T PRK05769 97 EPAVELAERLVEIAPGGFE------KKVFFTNSGTESNEAAIKIARYHT----G----RKYIIAFLGAFHGRTYGSLSLT 162 (441)
T ss_pred HHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHHh----C----CCeEEEECCCcCCccHHHHHhc
Confidence 4455677888887642111 157999999999999999999752 1 2223334444454433333332
Q ss_pred CC----------CCCCEEEEecCCCCC--cc-cC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---
Q 037144 196 GI----------DRKNIRAIKTTKSSS--YG-LS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP--- 251 (502)
Q Consensus 196 Gl----------g~~~v~~v~~~~~~~--~~-~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp--- 251 (502)
|. ....+..+|....-. +. -| ++.+++.+.+....+..+.+|++.......|.+-|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~ 242 (441)
T PRK05769 163 ASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKN 242 (441)
T ss_pred CCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHH
Confidence 21 012344555421000 00 11 23355533221111234667777766667788888
Q ss_pred -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCccc
Q 037144 252 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQY 330 (502)
Q Consensus 252 -l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~y 330 (502)
+++|.++|++||+++++|.++.|+.....-+.....++ ..|.++++ |.++..++.|.++.++.- . ..+. ..
T Consensus 243 ~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv-~pDivt~~--K~l~~G~p~gav~~~~~i-~-~~~~---~~ 314 (441)
T PRK05769 243 FFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGV-EPDIITLA--KAIAGGLPLGAVIGRAEL-M-FLPP---GS 314 (441)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCC-CCCEEEEc--ccccCCcccEEEEEehhh-h-hcCC---CC
Confidence 99999999999999999999986432211111111133 46888764 888766778888776442 1 1111 00
Q ss_pred ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--Ce
Q 037144 331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAFPR--NF 407 (502)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~~~--~~ 407 (502)
.. .+. .+.+.......++++.+.. +..++..++.++|++.|+++. .+.++... ..
T Consensus 315 ~~-----------------~T~-~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G 372 (441)
T PRK05769 315 HA-----------------NTF-GGNPVAAAAALATLEELEE----GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLG 372 (441)
T ss_pred CC-----------------CCC-CcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecce
Confidence 00 011 1111222333344444422 567778888888888886531 12222111 12
Q ss_pred eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144 408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH 487 (502)
Q Consensus 408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d 487 (502)
.++.+.+..... +...+....+.+.+.++|.++ .+ .+...+|++.. ...+++|
T Consensus 373 ~~~~i~~~~~~~----------------------~~~~~~~~~~~~~~~~~Gil~-~~---~~~~~lr~~p~-l~~t~~~ 425 (441)
T PRK05769 373 LMIGVELVKDRK----------------------EPDPKLRDKVLYEAFKRGLLL-LG---AGKSAIRIIPP-LIITEEE 425 (441)
T ss_pred EEEEEEeccCCc----------------------cccHHHHHHHHHHHHhCCcEE-ec---CCCCEEEEeCC-CCCCHHH
Confidence 344444432100 000234556777888889653 22 23467999874 4457779
Q ss_pred HHHHHHHHHHHHHh
Q 037144 488 VRAAWTVVQEHLEA 501 (502)
Q Consensus 488 i~~~~~~l~~~~~~ 501 (502)
||+++++++++.++
T Consensus 426 id~~~~~l~~~l~~ 439 (441)
T PRK05769 426 ADIGLEILEEAIKE 439 (441)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988764
No 323
>PRK12403 putative aminotransferase; Provisional
Probab=99.41 E-value=1.2e-09 Score=113.67 Aligned_cols=327 Identities=10% Similarity=-0.001 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQ 193 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~ 193 (502)
.....++.+.|+++++-..+ ..+|+++||+||..|+..||...... +.. .+.+|+. ....|-+..-+..
T Consensus 97 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseA~e~AiklAr~~~~~~-g~~--~r~~ii~~~~~yHG~t~~~~s 166 (460)
T PRK12403 97 HPAVIELSELLFSLLPGHYS-------HAIYTNSGSEANEVLIRTVRRYWQVL-GKP--QKKIMIGRWNGYHGSTLAATA 166 (460)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhh-CCC--CCcEEEEECCCcCcccHhhhh
Confidence 34455566778887753212 47999999999999999998753221 110 2333333 3334766555555
Q ss_pred HcCCC--------CCCEEEEecCCC--CCccc--------CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144 194 IVGID--------RKNIRAIKTTKS--SSYGL--------SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---- 251 (502)
Q Consensus 194 ~~Glg--------~~~v~~v~~~~~--~~~~~--------d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---- 251 (502)
+.|.. ...+..+|.... .++.+ +.++|++.+.+.. ...+.+|++.......|.+-|
T Consensus 167 ~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~--~~~iaavI~Epv~g~gG~~~~~~~y 244 (460)
T PRK12403 167 LGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELG--AENVAGFVAEPFQGAGGMIFPPESY 244 (460)
T ss_pred cCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhC--CCceEEEEEccccCCCCCccCCHHH
Confidence 44431 012344442110 00011 1355666654321 123556777666666788877
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCC-cc
Q 037144 252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTN-PQ 329 (502)
Q Consensus 252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~-~~ 329 (502)
+++|.++|++||+.+++|.+++|+.-...-+..-..++ ..|.+++ .|.++..+ ..|.+++++. . .+.+... ..
T Consensus 245 l~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~~--gK~lggG~~Piga~v~~~~-i-~~~~~~~~~~ 319 (460)
T PRK12403 245 WPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGF-EPDTLSI--AKGLTSGYVPMGGLVLSKR-I-AEALVEQGGV 319 (460)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCC-CCCeEEE--cccccccccceEEEEECHH-H-HHHHhcCCCc
Confidence 99999999999999999999977633322111111244 3688885 59987664 6777777533 2 2333211 11
Q ss_pred cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHH-HHHHHHHHHHhcC-CCeEEecC--C
Q 037144 330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHV-GMAKLFERLVTSD-KRFEVAFP--R 405 (502)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~-~la~~l~~~l~~~-~~~~l~~~--~ 405 (502)
|+... |. .+.+..+.+..++|+.+-.+. +.++.. ++.++|++.|+++ ....++.. -
T Consensus 320 ~~~~~----------------T~-~gnPl~~Aaala~L~~i~~~~---l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG 379 (460)
T PRK12403 320 FAHGL----------------TY-SGHPVAAAVAIANLKALRDEG---VVTRVKDDTGPYLQRCLREVFGDHPLVGEVQG 379 (460)
T ss_pred cccCC----------------CC-CCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhcCCCEEeEee
Confidence 21110 00 111222233344555543333 445553 5666666666532 11222211 1
Q ss_pred CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcH
Q 037144 406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTME 485 (502)
Q Consensus 406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~ 485 (502)
...++.+.+....... ............+.+.+.++|.+.... + ..+|++.. ...++
T Consensus 380 ~Gl~~gie~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~Gll~~~~----~-~~~~l~Pp-l~it~ 436 (460)
T PRK12403 380 AGLVAALQFAEDKATR-----------------KRFANENDLAWRCRTIGFEEGVIIRST----L-GRMIMAPA-LVAGR 436 (460)
T ss_pred cceEEEEEEccCcccc-----------------ccccchhHHHHHHHHHHHhCCEEEEec----C-CEEEEECC-CCCCH
Confidence 1234444443211000 000000122345667778889654321 1 24777653 44678
Q ss_pred HHHHHHHHHHHHHHHh
Q 037144 486 SHVRAAWTVVQEHLEA 501 (502)
Q Consensus 486 ~di~~~~~~l~~~~~~ 501 (502)
+||+++++.+.++.++
T Consensus 437 ~eid~~~~~l~~al~~ 452 (460)
T PRK12403 437 AEIDELVDKTRIAVDR 452 (460)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8999999999887654
No 324
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.40 E-value=4.9e-10 Score=116.50 Aligned_cols=312 Identities=11% Similarity=0.026 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQ 193 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~ 193 (502)
.+.+.++.+.|++.+..- + ...|+++||||+..|+..||... ++..|+ .....|-...-...
T Consensus 138 ~~~~~~lAe~l~~~~p~~-~-------~v~f~~SGsEA~e~AlklAR~~t---------gr~~Ii~~~g~YHG~~~~~~~ 200 (474)
T PLN02482 138 CLLENVLAEMVIDAVPSV-E-------MVRFVNSGTEACMGVLRLARAYT---------GREKIIKFEGCYHGHADSFLV 200 (474)
T ss_pred CHHHHHHHHHHHHhCCCC-C-------EEEEeCChHHHHHHHHHHHHHhc---------CCCEEEEECCccCCCcchhhh
Confidence 456667788888886421 1 58999999999999999998752 233333 34334532211111
Q ss_pred Hc--CC-----------CC---CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hh
Q 037144 194 IV--GI-----------DR---KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LK 253 (502)
Q Consensus 194 ~~--Gl-----------g~---~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~ 253 (502)
.. |. .. ..+..+|. -|+++|++.+.+. +..+.+|++.......|.+-| ++
T Consensus 201 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l~~~l~~~---~~~iAavI~Epv~g~~G~i~p~~~fl~ 270 (474)
T PLN02482 201 KAGSGVATLGLPDSPGVPKAATSATLTAPY-------NDLEAVKKLFEAN---KGEIAAVILEPVVGNSGFIVPKKEFLE 270 (474)
T ss_pred hcCCCccccCCCCCCCCCCCCCCCeEEecC-------CChHHHHHHHHhC---CCceEEEEECCCCCCCCCcCCCHHHHH
Confidence 10 11 00 01122221 2789999988642 233557777766667787766 55
Q ss_pred HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCC-ccccc
Q 037144 254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTN-PQYLK 332 (502)
Q Consensus 254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~ 332 (502)
+|.++|++||+.+++|.++.|+ ..........-++ ..|.+++ .|.++..+..|.+..++. . .+.+... +.+..
T Consensus 271 ~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv-~PDi~t~--gK~lggG~Pigav~g~~e-i-~~~~~~~~~~~~~ 344 (474)
T PLN02482 271 GLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGI-TPDLTTL--GKVIGGGLPVGAYGGRRE-I-MEMVAPAGPMYQA 344 (474)
T ss_pred HHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCC-CCCEEEe--cchhhCCCceEEEEEcHH-H-HHhhccCCCcccc
Confidence 8999999999999999999665 3222111112234 5788776 599987677888876533 2 2333211 11111
Q ss_pred CccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCCeeE
Q 037144 333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK---RFEVAFPRNFSL 409 (502)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---~~~l~~~~~~~~ 409 (502)
. |+. +.+....+..++|+.+.. .+..++..++.++|+++|+++- ++.+......++
T Consensus 345 ~-----------------T~~-gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~ 403 (474)
T PLN02482 345 G-----------------TLS-GNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGM 403 (474)
T ss_pred c-----------------Ccc-hhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceE
Confidence 1 100 111122233445555433 2466777778888888886541 122221111234
Q ss_pred EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144 410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR 489 (502)
Q Consensus 410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~ 489 (502)
+.+.+....... .......+ .+....+...+.++|.++ .+.... . ++ + +...+++|||
T Consensus 404 ~gi~f~~~~~~~--------------~~~~~~~d-~~~~~~~~~~l~~~Gv~~-~~~~~~-~---~~-p-sl~ht~~dId 461 (474)
T PLN02482 404 FGFFFTEGPVYN--------------FADAKKSD-TAKFARFHRGMLEEGVYL-APSQFE-A---GF-T-SLAHTEEDID 461 (474)
T ss_pred EEEEEecCCccC--------------hhhhccCC-HHHHHHHHHHHHHCCeEE-eccCCC-C---Cc-C-CCCCCHHHHH
Confidence 444443211000 00000000 223456777888888643 332111 1 11 2 3334678999
Q ss_pred HHHHHHHHHHHhC
Q 037144 490 AAWTVVQEHLEAF 502 (502)
Q Consensus 490 ~~~~~l~~~~~~~ 502 (502)
++++++.++.+++
T Consensus 462 ~~l~al~~~l~~~ 474 (474)
T PLN02482 462 FTIAAAERVLARI 474 (474)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999987653
No 325
>PLN00144 acetylornithine transaminase
Probab=99.40 E-value=7.8e-10 Score=112.65 Aligned_cols=302 Identities=14% Similarity=0.048 Sum_probs=163.7
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC----C-CCeEEEeCCCCchhHHH
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN----I-SKLVVYSSDQTHCAFQK 190 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~----~-~~~~v~~s~~~H~s~~~ 190 (502)
+.+.++.+.|.++.+.+ ..+|+++||+|+..|+..||....++....+ . +..+|......|-...-
T Consensus 57 ~~~~~la~~l~~~~~~~---------~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~ 127 (382)
T PLN00144 57 IPQVELAKRLVASSFAD---------RVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLG 127 (382)
T ss_pred HHHHHHHHHHHhcCCCC---------eEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHH
Confidence 34455667777765432 4799999999999999999875322110000 0 12244445445544333
Q ss_pred HHHHcCCC---------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc--CC--hhHHHH
Q 037144 191 AAQIVGID---------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV--DP--LKPLCD 257 (502)
Q Consensus 191 aa~~~Glg---------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i--dp--l~eI~~ 257 (502)
+....+-. ...+..+|. -|+++|++.+.. ..+.+|++.-..++.|.+ ++ +++|.+
T Consensus 128 ~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~-----~~~aavi~eP~q~~gg~~~~~~~~~~~l~~ 195 (382)
T PLN00144 128 ALALTSKEQYRTPFEPLMPGVTFVEY-------GNLEAARKLIQK-----GKTAAVFVEPVQGEGGIYPATKEFLQGLRA 195 (382)
T ss_pred HHhcCCCccccccCCCCCCCeEEeCC-------CCHHHHHHhcCC-----CCeEEEEEccccCCCCCccCCHHHHHHHHH
Confidence 33332221 112233332 178999988742 234456665445553443 44 899999
Q ss_pred HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCC
Q 037144 258 VAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATD 337 (502)
Q Consensus 258 i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~ 337 (502)
+|++||+++++|.++.++......+.....++ ..|.+++ .|.++..+..|+++.++. . .+.+... ....
T Consensus 196 l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~PDi~t~--sK~l~~G~pig~v~~~~~-~-~~~~~~~--~~~~---- 264 (382)
T PLN00144 196 LCDEAGALLVFDEVQCGLGRTGYLWAHEAYGV-EPDIMTL--AKPLAGGLPIGAVLVTEK-V-ASAINPG--DHGS---- 264 (382)
T ss_pred HHHHcCCEEEEechhhCCCccchHhhhhhcCC-CCCEEEe--cccccCCcceEEEEEcHH-H-HhccCCC--CCCC----
Confidence 99999999999999987543221111112233 4675554 699987777888887533 2 2222110 0000
Q ss_pred CCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH----hcCCCeEEecCCCeeEEEEE
Q 037144 338 QEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLV----TSDKRFEVAFPRNFSLVCFR 413 (502)
Q Consensus 338 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l----~~~~~~~l~~~~~~~~v~f~ 413 (502)
+. .+.+..+..+.++++.+-... ..++..++.++|++.| .+.|.+.-+.. ...++.+.
T Consensus 265 -------------T~-~~~pl~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg-~G~~~~l~ 326 (382)
T PLN00144 265 -------------TF-AGGPLVCNAALAVLDKISKPG---FLASVAKKGEYLRELLRRKLGGNPHVKEVRG-VGLLVGIQ 326 (382)
T ss_pred -------------CC-CCCHHHHHHHHHHHHHHhhch---HHHHHHHHHHHHHHHHHHHHhhCCCceeeec-CceEEEEE
Confidence 11 111112233344445553333 3444445555555544 34443211211 22334444
Q ss_pred eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHH
Q 037144 414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWT 493 (502)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~ 493 (502)
+... ...+.+.+.++|..+.+. ....++|++... ..++++|+.+++
T Consensus 327 l~~~------------------------------~~~~~~~~~~~Gv~i~~~---~~~~~lrl~p~~-~~~~~~i~~~~~ 372 (382)
T PLN00144 327 LDVP------------------------------AGPLVDACRDSGLLVLTA---GKGDVVRLVPPL-VISEAELEQAVE 372 (382)
T ss_pred ecCc------------------------------cHHHHHHHHHCCeEEeec---CCCCEEEEeCCC-ccCHHHHHHHHH
Confidence 4111 135677777889754333 113689999854 345779999999
Q ss_pred HHHHHHHh
Q 037144 494 VVQEHLEA 501 (502)
Q Consensus 494 ~l~~~~~~ 501 (502)
.|.+++.+
T Consensus 373 ~l~~~l~~ 380 (382)
T PLN00144 373 ILADCLPA 380 (382)
T ss_pred HHHHHHHh
Confidence 99998765
No 326
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.40 E-value=1.1e-09 Score=113.67 Aligned_cols=324 Identities=13% Similarity=0.131 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G 196 (502)
...++.+.|.+++.-+.+ ..+|++|||+|+..|++.||.....+ +..+ +.-+|......|-...-+....|
T Consensus 93 ~~~~la~~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~gals~~~ 163 (445)
T PRK09221 93 LAFELAERLAELAPGGLD-------HVFFTNSGSESVDTALKIALAYHRAR-GQGT-RTRLIGRERGYHGVGFGGISVGG 163 (445)
T ss_pred HHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCccchhhhccCC
Confidence 344566777777632211 57999999999999999998753221 1111 22344445445543222222222
Q ss_pred C-------C--CCCEEEEecCC-CCC--cc--------cCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----h
Q 037144 197 I-------D--RKNIRAIKTTK-SSS--YG--------LSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----L 252 (502)
Q Consensus 197 l-------g--~~~v~~v~~~~-~~~--~~--------~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l 252 (502)
. + ...+..+|... ... +. -..++|++.++.. ....+.+|++.......|.+-| +
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~Epv~g~~G~~~~~~~yl 241 (445)
T PRK09221 164 IVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALH--DASTIAAVIVEPMAGSAGVLVPPKGYL 241 (445)
T ss_pred ChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCCCcccCCHHHH
Confidence 1 0 01233444321 000 00 1135677766532 1134567777777777899888 9
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccc
Q 037144 253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYL 331 (502)
Q Consensus 253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl 331 (502)
++|.++|++||+++++|.++.|+......+.....++ ..|.++++ |.++.. +..|.++.++. . .+.+...+.+.
T Consensus 242 ~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv-~PDi~~~g--K~l~gG~~Pi~av~~~~~-i-~~~~~~~~~~~ 316 (445)
T PRK09221 242 QRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGV-TPDIITFA--KGLTNGAIPMGAVIASDE-I-YDAFMQGPEYA 316 (445)
T ss_pred HHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCC-CCCEEEec--cccccCcccceeeEEcHH-H-HHhhccCcccc
Confidence 9999999999999999999866432211111111233 46877765 877543 23666666543 2 23332211111
Q ss_pred cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-Cee-E
Q 037144 332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-NFS-L 409 (502)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-~~~-~ 409 (502)
... ....|+. +.+.......++++.+-.+ .++++..++.++|++.|+++.++..+... ..+ +
T Consensus 317 ~~~------------~~~~T~~-~~pl~~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~ 380 (445)
T PRK09221 317 IEF------------FHGYTYS-AHPVACAAGLATLDIYREE---DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLV 380 (445)
T ss_pred ccc------------ccccCCC-cCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceE
Confidence 000 0001111 1121222333445544333 45778888999999998876332222111 112 2
Q ss_pred EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144 410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR 489 (502)
Q Consensus 410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~ 489 (502)
..+.+.+... .+ .....++.+.+.++|.+. .. .+ ..+|++.. ...+++||+
T Consensus 381 ~~v~~~~~~~-------------------~~----~~~~~~~~~~~~~~Gv~~-~~---~~-~~lr~~Pp-l~~t~~eid 431 (445)
T PRK09221 381 AGIELAPRPG-------------------AP----GARGYEAFMKCFEKGLLV-RY---TG-DTIALSPP-LIIEKAQID 431 (445)
T ss_pred EEEEEecccc-------------------cc----cchHHHHHHHHHHCCeEE-ee---cC-CEEEEECC-ccCCHHHHH
Confidence 2333322100 00 111346677788889643 22 12 47999864 456778999
Q ss_pred HHHHHHHHHHHh
Q 037144 490 AAWTVVQEHLEA 501 (502)
Q Consensus 490 ~~~~~l~~~~~~ 501 (502)
++++.|++++++
T Consensus 432 ~~~~~l~~~l~~ 443 (445)
T PRK09221 432 ELVDALGDALRA 443 (445)
T ss_pred HHHHHHHHHHHh
Confidence 999999988765
No 327
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.39 E-value=6.5e-11 Score=119.91 Aligned_cols=327 Identities=13% Similarity=0.112 Sum_probs=201.7
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH
Q 037144 112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA 191 (502)
Q Consensus 112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 191 (502)
.+..++-.++.+||+++.|++.- .+=..+|..+-..++.+.|.....+ |.. .+-+.+++..+|-.....
T Consensus 578 qGY~~lf~~Le~~Lc~iTG~D~~--------s~QPNsGA~GEYaGL~~IRaY~~~k-ge~--hRnvClIPvSAHGTNPAS 646 (1001)
T KOG2040|consen 578 QGYQQLFTELEKDLCEITGFDSF--------SLQPNSGAQGEYAGLRVIRAYLESK-GEG--HRNVCLIPVSAHGTNPAS 646 (1001)
T ss_pred hhHHHHHHHHHHHhheeecccce--------eecCCCCcccchhhHHHHHHHHHhc-cCC--cceeEEEeecccCCChhh
Confidence 35567777888999999999742 1223355566667777776654332 221 456778888899999999
Q ss_pred HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-CChhHHHHHHHHhCCEEEeec
Q 037144 192 AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-DPLKPLCDVAKQFGIWVHVDA 270 (502)
Q Consensus 192 a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-dpl~eI~~i~~~~g~~lhVDa 270 (502)
|.+.|+ +|+.|.++. +|.+|..+|+++.++...+ -.++.+|.++| .|.+ ..|+++.++.++||--+..||
T Consensus 647 A~Magm---kvvpV~~~~--~G~id~~dLk~kaekh~~~---Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDG 717 (1001)
T KOG2040|consen 647 AAMAGM---KVVPVGCDA--NGNIDMVDLKAKAEKHKDN---LAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDG 717 (1001)
T ss_pred HHhcCC---EEEEeeccC--CCCccHHHHHHHHHHhhhh---hheeEEecccc-cccccccHHHHHHHHHhcCCEEEecC
Confidence 999999 999998875 5799999999988765432 34778888875 4677 469999999999999999999
Q ss_pred ccccc-cccCccchhhhcCCCCCCeeEEccCCcCCCCCcceE-----EEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144 271 AYAGS-ACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCC-----LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE 344 (502)
Q Consensus 271 A~g~~-~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~-----~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 344 (502)
|.=-. +-+|.. .+ -++|+.-++.||+|..|.|.|. +.+|.. .++||....... ..+.
T Consensus 718 ANMNAqVGlc~p-Gd-----~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~H---------LapfLP~HpVvs--~~~~ 780 (1001)
T KOG2040|consen 718 ANMNAQVGLCRP-GD-----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH---------LAPFLPSHPVVS--PGRP 780 (1001)
T ss_pred CCccceecccCC-cc-----ccccceeecccceeeecCCCCCCCCCccchhhh---------ccccCCCCCccC--CCCC
Confidence 75221 112211 11 1899999999999988865544 444321 233443211100 0000
Q ss_pred cCCCcccccCCCCCC---ch-HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEE--EEeecCc
Q 037144 345 VGYKDWQITLCRRFR---SL-KLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVC--FRVTPSA 418 (502)
Q Consensus 345 ~~~~~~~~~~sr~~~---al-~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~--f~~~~~~ 418 (502)
-+....+--.+-+++ .+ --|+.++.+|..|+...-+-.+-+|+|+.++|+.. ++++....-+.|. |.+.-..
T Consensus 781 ~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~~~~vaHEFIlD~r~ 858 (1001)
T KOG2040|consen 781 EDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKILFRGENGLVAHEFILDLRP 858 (1001)
T ss_pred CCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--cceeEecCCcceeeeeeeechh
Confidence 000001111122222 23 34899999999999999888999999999999875 6665433333443 2221110
Q ss_pred chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee-eECCEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144 419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA-IVGGIYVLRFAAGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~ 497 (502)
++... +--...+.++|..-|.- .++ .|.-.+.|=+-.+.. .+.+++|++++++-.
T Consensus 859 ---------fK~~a------------gieavDvAKRL~DYgFH--aPTmswPV~gtLMIEPTES-E~k~ElDRfcdAliS 914 (1001)
T KOG2040|consen 859 ---------FKKTA------------GIEAVDVAKRLMDYGFH--APTMSWPVAGTLMIEPTES-EDKAELDRFCDALIS 914 (1001)
T ss_pred ---------hcccc------------CCcHHHHHHHHHhccCC--CCccccccCCceEeccCcc-ccHHHHHHHHHHHHH
Confidence 00000 00023455666666752 222 232233344433322 345789999999877
Q ss_pred HHHh
Q 037144 498 HLEA 501 (502)
Q Consensus 498 ~~~~ 501 (502)
+.++
T Consensus 915 IreE 918 (1001)
T KOG2040|consen 915 IREE 918 (1001)
T ss_pred HHHH
Confidence 6553
No 328
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.39 E-value=8.7e-10 Score=114.01 Aligned_cols=310 Identities=11% Similarity=0.043 Sum_probs=171.4
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+.+.++.+.|.+++.- . ....|+++||+|+..|+..||... + +..+|......|-...-+....
T Consensus 93 ~~~~~la~~l~~~~p~-~-------~~v~f~~sGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~~~~~~ 156 (428)
T PRK12389 93 ELEIEFAKMLKEAIPS-L-------EKVRFVNSGTEAVMTTIRVARAYT----G----RTKIIKFAGCYHGHSDLVLVAA 156 (428)
T ss_pred HHHHHHHHHHHHhCCC-C-------cEEEEeCCHHHHHHHHHHHHHHhh----C----CCEEEEECCCcCCChHHHHHhc
Confidence 3455677777777641 1 157999999999999999999752 1 2234444444564433333333
Q ss_pred CCCC----------------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHH
Q 037144 196 GIDR----------------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPL 255 (502)
Q Consensus 196 Glg~----------------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI 255 (502)
|-+. ..+..+|. -|++.|++.+++.. ..+.+|++.......|.+.| +++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~---~~vaavi~EPv~g~~G~~~p~~~yl~~l 226 (428)
T PRK12389 157 GSGPSTLGTPDSAGVPKSIAQEVITVPF-------NDIEALKEALDKWG---DEVAAVLVEPIVGNFGIVEPKPGFLEAV 226 (428)
T ss_pred CCcccccCCCCCCCCCCcccCceEEcCC-------CCHHHHHHHHHhcC---CcEEEEEEeCCCCCCCCcCCCHHHHHHH
Confidence 2100 11222221 17899999886432 23557777766667788888 9999
Q ss_pred HHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCc
Q 037144 256 CDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNE 334 (502)
Q Consensus 256 ~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~ 334 (502)
.++|++||+.+++|.++.|+ -....+.....++ ..|.+++ -|.++..+..|.++.++. . .+.+.. .+.+....
T Consensus 227 ~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv-~PDivt~--gK~lggG~Pi~av~~~~~-i-~~~~~~~~~~~~~~T 300 (428)
T PRK12389 227 NELAHEAGALVIYDEVITAF-RFMYGGAQDLLGV-EPDLTAL--GKIIGGGLPIGAYGGRKD-I-MEQVAPLGPAYQAGT 300 (428)
T ss_pred HHHHHHcCCEEEEEcccccc-ccCcchhhHHhCC-CCCeeee--chhhcCCCceeEEeEHHH-H-HhhhccCCCcccccC
Confidence 99999999999999999876 2211111111234 5788776 498876677888876533 2 233321 11111110
Q ss_pred cCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEecCCCeeE
Q 037144 335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKR-FEVAFPRNFSL 409 (502)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~-~~l~~~~~~~~ 409 (502)
. .+.+..+.+..++++.+..+ ++.++..++.++|++.|++ .|. .++..- .++
T Consensus 301 -----------------~-~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~--~g~ 357 (428)
T PRK12389 301 -----------------M-AGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAEKHGITITINRL--KGA 357 (428)
T ss_pred -----------------C-ccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEec--CcE
Confidence 0 11112223334455554333 3667777888888888865 331 122111 123
Q ss_pred EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144 410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR 489 (502)
Q Consensus 410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~ 489 (502)
+.+.+....... . .............+.+.+.++|.++ .+. +...+.++ ...+++||+
T Consensus 358 ~gi~~~~~~~~~--------------~-~~~~~~~~~~~~~~~~~l~~~Gv~~-~~~---~~~~~~~~---l~~t~e~id 415 (428)
T PRK12389 358 LTVYFTDEKVTN--------------Y-DQAERSDGEAFGKFFKLMLNQGINL-APS---KYEAWFLT---TAHTEEDIE 415 (428)
T ss_pred EEEEEeCCCCCC--------------h-hhhcccCHHHHHHHHHHHHHCCcEe-ecC---CCCCeeec---CCCCHHHHH
Confidence 333332211000 0 0000000223457778888888644 332 11123333 335778999
Q ss_pred HHHHHHHHHHHhC
Q 037144 490 AAWTVVQEHLEAF 502 (502)
Q Consensus 490 ~~~~~l~~~~~~~ 502 (502)
+++++++++.+++
T Consensus 416 ~~~~~l~~~l~~~ 428 (428)
T PRK12389 416 ETLEAVDRAFAQL 428 (428)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999987653
No 329
>PRK06062 hypothetical protein; Provisional
Probab=99.38 E-value=1.3e-09 Score=113.08 Aligned_cols=323 Identities=10% Similarity=0.020 Sum_probs=171.9
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
.+...++.+.|.++..-+- ...+|+++||+|+..|++.||... + +..+|......|-...-+...
T Consensus 94 ~~~~~~lae~L~~~~p~~~-------~~v~f~~SGsEAve~AlklAr~~t----g----r~~ii~~~~~yHG~t~~als~ 158 (451)
T PRK06062 94 NDARSEAARLIAERAPGDL-------SKVFFTNGGADANEHAVRMARLHT----G----RPKVLSAYRSYHGGTGSAINL 158 (451)
T ss_pred CHHHHHHHHHHHHhCCCCC-------CEEEEcCChHHHHHHHHHHHHHhh----C----CceEEEEeCCCCCCCHHHHhh
Confidence 3444556677777763211 158999999999999999998752 1 223344444445443333333
Q ss_pred cCCC--------CCCEEEEecCCCCC--c--ccC-------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144 195 VGID--------RKNIRAIKTTKSSS--Y--GLS-------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---- 251 (502)
Q Consensus 195 ~Glg--------~~~v~~v~~~~~~~--~--~~d-------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---- 251 (502)
.|.. ...+..++...... + .-| +++|+++|+.. .+..+.+|++.......|.+-|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~~y 236 (451)
T PRK06062 159 TGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELE--GPSTIAAILLESVPGTAGILVPPPGY 236 (451)
T ss_pred cCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHH
Confidence 3210 01223333221000 0 012 67778877531 1234567777666666788888
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCccc
Q 037144 252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQY 330 (502)
Q Consensus 252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~y 330 (502)
+++|.++|++||+.+++|.++.|+.....-+.....++ ..|.+++ -|.++..+ +.|.++.++. . .+.+... .+
T Consensus 237 l~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv-~PDi~t~--gK~lggG~~Pigav~~~~~-i-~~~~~~~-~~ 310 (451)
T PRK06062 237 LAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV-VPDLITF--AKGVNSGYVPLGGVAISEA-I-AATFADR-PY 310 (451)
T ss_pred HHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC-CCCeeee--chhhhcCCcCcEEEEEcHH-H-HHHhccC-CC
Confidence 99999999999999999999987533222111112244 5788876 49987654 5788877653 3 3344211 11
Q ss_pred ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHH-HHHHHHHhc----CCCeEEecCC
Q 037144 331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMA-KLFERLVTS----DKRFEVAFPR 405 (502)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la-~~l~~~l~~----~~~~~l~~~~ 405 (502)
... .|+. +.+..+....++|+.+-.+. ++++..++. ++|++.|++ .|.+.-+. -
T Consensus 311 ~~~----------------~T~~-gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vr-G 369 (451)
T PRK06062 311 PGG----------------LTYS-GHPLACAAAVATINAMEEEG---IVENAARIGAEVLGPGLRELAERHPSVGEVR-G 369 (451)
T ss_pred CCC----------------CCCC-CCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhcCCcEEeEe-c
Confidence 110 0111 11222233344555443333 455555554 456555544 33211111 1
Q ss_pred CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcH
Q 037144 406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTME 485 (502)
Q Consensus 406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~ 485 (502)
...++.+.+...... .++. .. .... ......+.+.+.++|.+. .+ . ...+|++.. ...++
T Consensus 370 ~Gl~~gve~~~~~~~---------~~~~---~~-~~~~-~~~~~~~~~~l~~~Gvl~-~~---~-~~~lrl~pp-l~~t~ 429 (451)
T PRK06062 370 LGVFWALELVADRET---------REPL---AP-YGAS-SAAMAAVKAACKERGLLP-FV---N-GNRIHVVPP-CTVTE 429 (451)
T ss_pred cccEEEEEEcccccc---------cCCC---cc-cchh-hHHHHHHHHHHHHCCcEE-ee---c-CCEEEEECC-ccCCH
Confidence 122344444321000 0000 00 0000 223567888888889753 22 1 236898763 34577
Q ss_pred HHHHHHHHHHHHHHHh
Q 037144 486 SHVRAAWTVVQEHLEA 501 (502)
Q Consensus 486 ~di~~~~~~l~~~~~~ 501 (502)
+|||++++.+.+++++
T Consensus 430 ~eid~~~~~l~~~l~~ 445 (451)
T PRK06062 430 DEVREGLAILDAALAV 445 (451)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8999999999988764
No 330
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.38 E-value=9.5e-10 Score=113.89 Aligned_cols=325 Identities=11% Similarity=0.123 Sum_probs=173.4
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+.+.++.+.|++++. ... ...+|+++||+|+..|+..||.....+ +..+ +.-+|......|-...-+..+.
T Consensus 89 ~~~~~la~~l~~~~p--~~~-----~~v~f~~sGseA~e~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~gals~t 159 (442)
T PRK13360 89 PKAFELANRIAEIAP--GGL-----NHVFFTNSGSESVDTALKIALAYHRAR-GEGS-RTRLIGRERGYHGVGFGGISVG 159 (442)
T ss_pred HHHHHHHHHHHHhCC--CCC-----CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEEcCCcCCccHhhhhcc
Confidence 344467777888763 111 147999999999999999999753211 1100 1223334444454322222222
Q ss_pred CC-------C--CCCEEEEecCCC-CC--cc--------cCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144 196 GI-------D--RKNIRAIKTTKS-SS--YG--------LSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---- 251 (502)
Q Consensus 196 Gl-------g--~~~v~~v~~~~~-~~--~~--------~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---- 251 (502)
|. + ...+..+|.... .. +. -..++||+++... .+..+.+|++.......|.+-|
T Consensus 160 g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~f 237 (442)
T PRK13360 160 GIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGY 237 (442)
T ss_pred CChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHH
Confidence 21 0 113344544310 00 00 0246777777532 1234567777776777788888
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCccc
Q 037144 252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQY 330 (502)
Q Consensus 252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~y 330 (502)
+++|.++|++||+++++|.++.|+......+..-..++ ..|.+++ .|.++.. +..|.++.+++ . .+.+...+..
T Consensus 238 l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDivt~--gK~l~gG~~P~gav~~~~~-i-~~~~~~~~~~ 312 (442)
T PRK13360 238 LQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGV-TPDLLTC--AKGLTNGAIPMGAVFVSSE-I-HDAFMQGPEA 312 (442)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCC-CCceeee--eeccccCccceEEEEEcHH-H-HHHhhcCCcc
Confidence 99999999999999999999965432221111111234 4787766 5988644 34677776543 2 2233221100
Q ss_pred ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC-ee-
Q 037144 331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN-FS- 408 (502)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~-~~- 408 (502)
.. . -+...|+. +.+.......++++.+..+ .+.++..++.++|++.|+++..+..+.+.. .+
T Consensus 313 ~~-----------~-~~~~~T~~-g~pl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl 376 (442)
T PRK13360 313 GI-----------E-FFHGYTYS-GHPLACAAALATLDLYERE---GLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGL 376 (442)
T ss_pred cc-----------c-cccCCCCC-CCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccce
Confidence 00 0 00001111 1222233444455555333 356677788888888887653222221111 11
Q ss_pred EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144 409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV 488 (502)
Q Consensus 409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di 488 (502)
++.+.+.+... .. .....++.+++.++|.+. .. .+ ..+|++.. ...+++||
T Consensus 377 ~~~~~l~~~~~-------------------~~----~~~~~~~~~~l~~~Gvl~-~~---~~-~~lr~~Pp-l~~t~~ei 427 (442)
T PRK13360 377 VGAVELAPRDG-------------------KP----GKRAYEVFLKCFEKGLMI-RY---TG-DILALSPP-LIIEEAQI 427 (442)
T ss_pred EEEEEEecCCC-------------------Cc----chhHHHHHHHHHHCCcEE-Ee---cC-CEEEEeCC-CccCHHHH
Confidence 22233322110 00 112346677788888643 22 12 47999864 44677899
Q ss_pred HHHHHHHHHHHHh
Q 037144 489 RAAWTVVQEHLEA 501 (502)
Q Consensus 489 ~~~~~~l~~~~~~ 501 (502)
|++++.|.++.++
T Consensus 428 d~~~~~l~~~l~~ 440 (442)
T PRK13360 428 DELFDILAQALKE 440 (442)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988765
No 331
>PRK06105 aminotransferase; Provisional
Probab=99.37 E-value=1.2e-09 Score=113.84 Aligned_cols=332 Identities=10% Similarity=0.034 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
.+.+.++.+.|.+++..+.. ..+|+++||+|+-.|++.+|.....+ +..+ +..+|......|-...-+..+
T Consensus 91 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseAve~AlKlar~~~~~~-g~t~-r~~il~~~~~yHG~t~~a~s~ 161 (460)
T PRK06105 91 HGPVIDLAEKLVAMAPVPMS-------KVFFTNSGSEANDTVVKLVWYYNNAL-GRPE-KKKIISRQRGYHGVTIASASL 161 (460)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEecCccCCcchhheec
Confidence 34445566778887643222 57999999999999999998642111 1111 233444455556544333332
Q ss_pred cCCC---------CCCEEEEecCCCCCc-----------ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---
Q 037144 195 VGID---------RKNIRAIKTTKSSSY-----------GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP--- 251 (502)
Q Consensus 195 ~Glg---------~~~v~~v~~~~~~~~-----------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp--- 251 (502)
.|.. ...+..+|....-.+ .-..++||+++... ....+.+|++.......|.+-|
T Consensus 162 t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG~~~~~~~ 239 (460)
T PRK06105 162 TGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAE--GPDTIAAFIGEPVMGAGGVIVPPKT 239 (460)
T ss_pred cCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccCCCCCccCCHH
Confidence 2211 112333432210000 01245677776431 1234567777665666687777
Q ss_pred -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcc
Q 037144 252 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQ 329 (502)
Q Consensus 252 -l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~ 329 (502)
+++|.++|++||+.+++|.++.|+.....-+.....++ ..|.++++ |.++.. .+.|.++.++. . .+.+.....
T Consensus 240 yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v-~PDi~~~g--K~lggG~~P~~av~~~~~-i-~~~~~~~~~ 314 (460)
T PRK06105 240 YWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI-KPDILVMS--KQLSSSYQPLSAVLMNEK-V-YDPIADESG 314 (460)
T ss_pred HHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC-CCCeeeee--cccccCcccceEEEEcHH-H-HHHHhcccc
Confidence 99999999999999999999966543322222112244 58888765 888755 35777777643 2 233322110
Q ss_pred cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--Ce
Q 037144 330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR--NF 407 (502)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~--~~ 407 (502)
...... ...|. .+.+..+....++|+.+-. .+++++..++.++|.+.|+++....++... ..
T Consensus 315 ~~~~~~------------h~~T~-~gnpl~~aaa~a~L~~i~~---~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~G 378 (460)
T PRK06105 315 KIGTFG------------HGFTA-SGHPVAAAVALENLAIIEE---RDLVGNAAERGARLQARLRALADHPLVGEVRGVG 378 (460)
T ss_pred cCcccc------------cCCCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecc
Confidence 000000 00000 1112222333344544433 256778888888888888765332222111 12
Q ss_pred eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144 408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH 487 (502)
Q Consensus 408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d 487 (502)
.++.+.+.+.... ....+ ........+...+.++|.++ .+. + .++|++.. ...+++|
T Consensus 379 l~~gie~~~~~~~---------------~~~~~--~~~~~a~~i~~~~~~~Gvl~-~~~---g-~~i~l~Pp-l~it~~e 435 (460)
T PRK06105 379 LIAAVELVADKAT---------------KTPFE--PPGKVGARANAAAHEHGVIS-RAM---G-DTLAFCPP-LIITAAQ 435 (460)
T ss_pred eEEEEEEecCccc---------------CCCCC--chhHHHHHHHHHHHHCCeEE-Eec---C-CEEEEECC-CccCHHH
Confidence 2334444321100 00000 00123456777888889654 321 2 47998853 3467889
Q ss_pred HHHHHHHHHHHHHh
Q 037144 488 VRAAWTVVQEHLEA 501 (502)
Q Consensus 488 i~~~~~~l~~~~~~ 501 (502)
||++++.+.++.++
T Consensus 436 id~~~~~l~~~l~~ 449 (460)
T PRK06105 436 VDEMVDRFGRALDD 449 (460)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887654
No 332
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.37 E-value=1.2e-09 Score=105.26 Aligned_cols=165 Identities=10% Similarity=0.074 Sum_probs=128.7
Q ss_pred HHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCC
Q 037144 94 GEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENI 173 (502)
Q Consensus 94 ~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~ 173 (502)
+..+.....-..+.|+.|.+..-+.+.+++.+.+.=|.|.+. .+.++|+|+|.|..+.|......
T Consensus 95 A~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p-----~dI~LT~GAS~ai~~il~l~~~~---------- 159 (475)
T KOG0258|consen 95 AKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADP-----EDIFLTTGASPAIRSILSLLIAG---------- 159 (475)
T ss_pred HHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCH-----HHeeecCCCcHHHHHHHHHHhcC----------
Confidence 333444444456789999999999999999999999975442 37899999999986666555432
Q ss_pred CCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---C
Q 037144 174 SKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---D 250 (502)
Q Consensus 174 ~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---d 250 (502)
+++=|+++-+-++-+...+..+|. ..+..-+|+..+|.+|.++|++.+++.+ ++..|.++|+..+.|+||.+ .
T Consensus 160 ~~~GvliPiPQYPLYsAti~l~~~---~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e 235 (475)
T KOG0258|consen 160 KKTGVLIPIPQYPLYSATISLLGG---TQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEE 235 (475)
T ss_pred CCCceEeecCCCchhHHHHHHhCC---cccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHH
Confidence 344455565555555556678888 7777778887789999999999999987 88888888888889999998 6
Q ss_pred ChhHHHHHHHHhCCEEEeecccccccc
Q 037144 251 PLKPLCDVAKQFGIWVHVDAAYAGSAC 277 (502)
Q Consensus 251 pl~eI~~i~~~~g~~lhVDaA~g~~~~ 277 (502)
.|++|..+|+++|+.+..|..|--..+
T Consensus 236 ~ie~i~~fa~~~~l~llaDEVYQ~Nvy 262 (475)
T KOG0258|consen 236 NIEGIICFAAEEGLVLLADEVYQDNVY 262 (475)
T ss_pred HHHHHHHHHHHcCeEEechHHHHhhcc
Confidence 799999999999999999998755443
No 333
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.37 E-value=1.7e-10 Score=113.72 Aligned_cols=219 Identities=13% Similarity=0.119 Sum_probs=151.0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch---
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC--- 186 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~--- 186 (502)
..|....+|.. ++.+-|.+. ++.+++|..|...++..... .+..|+++...+.
T Consensus 75 ~nPt~~~le~~----iaal~ga~~---------~l~fsSGmaA~~~al~~L~~-----------~g~~iV~~~~~Y~gT~ 130 (409)
T KOG0053|consen 75 GNPTRDVLESG----IAALEGAAH---------ALLFSSGMAAITVALLHLLP-----------AGDHIVATGDVYGGTL 130 (409)
T ss_pred CCCchHHHHHH----HHHHhCCce---------EEEecccHHHHHHHHHHhcC-----------CCCcEEEeCCCcccHH
Confidence 34555555554 778877653 57777777777666665543 3445555554443
Q ss_pred -hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 187 -AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 187 -s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
-+.+....+|+ ....+.++ |++.++++++++++ +|-+-.++|+++.+-||++|+++|+++|+.
T Consensus 131 ~~l~~~~~~~gi---e~~~vd~~-------~~~~~~~~i~~~t~------~V~~ESPsNPll~v~DI~~l~~la~~~g~~ 194 (409)
T KOG0053|consen 131 RILRKFLPKFGG---EGDFVDVD-------DLKKILKAIKENTK------AVFLESPSNPLLKVPDIEKLARLAHKYGFL 194 (409)
T ss_pred HHHHHHHHHhCc---eeeeechh-------hHHHHHHhhccCce------EEEEECCCCCccccccHHHHHHHHhhCCCE
Confidence 34555667888 77777654 67888888887554 899999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
++||..++++.. ++.... +||.++-+..||+++.-. .|.+..+..+..++.. ....++..
T Consensus 195 vvVDnTf~~p~~-~~pL~l------GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~-~~~~~lg~---------- 256 (409)
T KOG0053|consen 195 VVVDNTFGSPYN-QDPLPL------GADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLK-FLQEDLGW---------- 256 (409)
T ss_pred EEEeCCcCcccc-cChhhc------CCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHH-HHHHHhcC----------
Confidence 999999988743 332222 799999999999986533 3555554343322221 11122211
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
-..++.+|..+| |.+-+.-+++++.+++..+.+.|++.|.++-
T Consensus 257 -------------~~~p~~~~ll~R--glktl~lRi~~~~ena~~~A~~Le~~~~v~k 299 (409)
T KOG0053|consen 257 -------------CEDPFDLFLLSR--GLKTLHLRINKHSENALKIALLLEAHPKVKK 299 (409)
T ss_pred -------------CCCHHHHHHHhc--CcchhhhhHHHHHHHHHHHHHHhhhCCceeE
Confidence 125666676666 4455666888899999999999998888884
No 334
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.37 E-value=1.4e-09 Score=112.91 Aligned_cols=314 Identities=11% Similarity=0.037 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHHHc
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQIV 195 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~~~ 195 (502)
...++.+.|+++++.... ..+|++|||+||..|+..||... ++..|+. ....|-...-+..+.
T Consensus 97 ~~~~lae~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t---------gr~~ii~~~~~yHG~t~~a~s~~ 160 (457)
T PRK05639 97 RAIRVAEKLAEISPIENP-------KVLFGLSGSDAVDMAIKVSKFST---------RRPWILAFIGAYHGQTLGATSVA 160 (457)
T ss_pred HHHHHHHHHHhhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhc---------CCCeEEEECCCcCCccHHHHHHc
Confidence 344566777777653222 58999999999999999998641 2333443 444554433333333
Q ss_pred CC--------C--CCCEEEEecCCCCC--cc----cCHH--------HHHHHHHHHHhcCCccEEEEEecCCccccccCC
Q 037144 196 GI--------D--RKNIRAIKTTKSSS--YG----LSAE--------SVLSQINLDVEAELIPLFLCATVGTTAITAVDP 251 (502)
Q Consensus 196 Gl--------g--~~~v~~v~~~~~~~--~~----~d~~--------~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp 251 (502)
|. + ...++.+|...... +. -|.+ .|++.|......+....+|++.......|.+-|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p 240 (457)
T PRK05639 161 AFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVP 240 (457)
T ss_pred CCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCC
Confidence 31 1 12355565532100 00 1233 334433221111234566777655555566544
Q ss_pred ----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCC
Q 037144 252 ----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTN 327 (502)
Q Consensus 252 ----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~ 327 (502)
+++|.++|++||+++++|.++.|+.....-+.....++ ..|.+++ .|.++..++.|.++.++.- . +.+.
T Consensus 241 ~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~~--gK~l~gG~pi~av~~~~~i-~-~~~~-- 313 (457)
T PRK05639 241 PENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEV-KPDLIIF--GKGVASGMGLSGVIGRKEL-M-DLTS-- 313 (457)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCC-CCCEEEe--chhhcCCCcceeEEehHHH-H-hhcC--
Confidence 88999999999999999999976432221111112244 5898885 6999766777888775442 1 1111
Q ss_pred cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCC-
Q 037144 328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFPR- 405 (502)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~~- 405 (502)
..+.. |. .+.+..+.+..++++.+..+ +.+++..++.++|++.|+++ .++.++...
T Consensus 314 ~~~~~------------------T~-~g~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~Vr 371 (457)
T PRK05639 314 GSALL------------------TP-AANPVISAAAEATLEIIEEE---NLLKNALKVGEFIKKRLLEMKESFEVIGDVR 371 (457)
T ss_pred CCccc------------------CC-CcCHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHHhCCCEEeec
Confidence 01111 10 01111222333444444333 45566777888888888663 122232211
Q ss_pred -CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCc
Q 037144 406 -NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTM 484 (502)
Q Consensus 406 -~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~ 484 (502)
...++.+.+..+... . ..+....+.+.+.++|.+. .+. ..+..++|++.. ...+
T Consensus 372 G~Gl~~gve~~~~~~~-------------------~---~~~~~~~~~~~~~~~Gv~~-~~~-g~~~~~lr~~Pp-l~it 426 (457)
T PRK05639 372 GKGLMIGVEIVKENGK-------------------P---DPELTGKICWRAFELGLIL-PSY-GMFGNVIRITPP-LVIT 426 (457)
T ss_pred cceeEEEEEEecCCCC-------------------C---CHHHHHHHHHHHHhCCeEE-eec-CCCCCEEEEeCC-CccC
Confidence 122344444321100 0 0233467788888889654 332 112358999874 4567
Q ss_pred HHHHHHHHHHHHHHHH
Q 037144 485 ESHVRAAWTVVQEHLE 500 (502)
Q Consensus 485 ~~di~~~~~~l~~~~~ 500 (502)
++|||++++.+.+..+
T Consensus 427 ~~~id~~~~~l~~~l~ 442 (457)
T PRK05639 427 KEIAEKGLEIMERAIK 442 (457)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7799999999998765
No 335
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.37 E-value=3.3e-10 Score=113.38 Aligned_cols=251 Identities=12% Similarity=0.064 Sum_probs=144.2
Q ss_pred CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEE-----
Q 037144 104 VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVV----- 178 (502)
Q Consensus 104 ~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v----- 178 (502)
.-..|..+|.+..||+. ++++||.+. +++|.+|+.++.....+.... ++..+
T Consensus 66 GDD~Y~gdpSv~~Lee~----vael~G~E~---------alpthqGRgaE~Il~~~~~~~----------~g~e~g~~~~ 122 (467)
T TIGR02617 66 GDEAYSGSRSYYALAES----VKNIFGYQY---------TIPTHQGRGAEQIYIPVLIKK----------REQEKGLDRS 122 (467)
T ss_pred CCcccccCchHHHHHHH----HHHHhCCce---------EEECCCCchHHHHHHHhhccc----------cccccccccc
Confidence 33468899999988877 457888764 688888999987776655431 22222
Q ss_pred --EeCCCCchhH-HHHHHHcCCCCCCEEEEecC--------CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc-c
Q 037144 179 --YSSDQTHCAF-QKAAQIVGIDRKNIRAIKTT--------KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA-I 246 (502)
Q Consensus 179 --~~s~~~H~s~-~~aa~~~Glg~~~v~~v~~~--------~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~-~ 246 (502)
+++...|+-- .-.+.+.|. .++.++.+ ..-+|.+|+++|+++|++... ...+ ++..+..+|. -
T Consensus 123 ~~~v~hn~~fett~g~a~l~G~---~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~-~~i~-~v~~tlt~N~~G 197 (467)
T TIGR02617 123 KMVAFSNYFFDTTQGHSQINGC---TARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP-NNVP-YIVATITCNSAG 197 (467)
T ss_pred ccccceEEEEecchHHHHHcCc---eeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC-CCce-eeeeeEEEecCC
Confidence 2233445443 335677787 76665432 112479999999999986421 1222 3333333333 3
Q ss_pred ccc---CChhHHHHHHHHhCCEEEeecccccc-cccCc---------cchhhh-cCCCCCCeeEEccCCcCCCCCcceEE
Q 037144 247 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGS-ACICP---------EFRHFI-DGVECVDSFSFNPHKWLFTTLDCCCL 312 (502)
Q Consensus 247 G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~-~~~~~---------~~~~~~-~~~~~aDsi~~~~hK~l~~p~~~g~~ 312 (502)
|.. +.++++.++|++||+.+|+|||.-.- +.+.. ..+... .-.+.+|++++++.|.+++|.| |++
T Consensus 198 Gqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG-g~L 276 (467)
T TIGR02617 198 GQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG-GLL 276 (467)
T ss_pred CEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc-ceE
Confidence 433 67889999999999999999986331 22111 011111 0124899999999999999964 455
Q ss_pred EeeCc---hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 037144 313 WVKDP---SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLF 389 (502)
Q Consensus 313 ~~r~~---~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l 389 (502)
..++. ..+...-.....|- +..-|+.+ .+|-..+++ ..|+. ..-...+++.....+||
T Consensus 277 ag~d~~~~~l~~~~~~~~i~~E-----------Gf~tYGGl---agrd~ea~a--~Gl~e---~~~~~yl~~ri~qv~yl 337 (467)
T TIGR02617 277 CFKDDSFFDVYTECRTLCVVQE-----------GFPTYGGL---EGGAMERLA--VGLYD---GMNLDWLAYRINQVQYL 337 (467)
T ss_pred EecchhHHHHHHHHHhhccccc-----------CCcCcCch---hHHHHHHHH--hhhhh---cccHHHHHHHHHHHHHH
Confidence 56665 33322211121111 11111100 112112221 12221 11235566677778899
Q ss_pred HHHHhcCCCeEEec
Q 037144 390 ERLVTSDKRFEVAF 403 (502)
Q Consensus 390 ~~~l~~~~~~~l~~ 403 (502)
.+.|.+. |+.++.
T Consensus 338 ~~~L~~~-Gvpi~~ 350 (467)
T TIGR02617 338 VNGLEEI-GVVCQQ 350 (467)
T ss_pred HHHHHhC-CCcEEe
Confidence 9999886 787765
No 336
>PRK07678 aminotransferase; Validated
Probab=99.36 E-value=3.8e-09 Score=109.83 Aligned_cols=327 Identities=12% Similarity=0.071 Sum_probs=173.7
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G 196 (502)
.+.++.+.|.++++... ..+|++|||+|+..|+..||..... .|..+ +..+|......|-...-+....|
T Consensus 90 ~~~~lae~l~~~~~~~~--------~v~f~~sGseA~e~AlklAr~~t~~-~g~~~-r~~ii~~~~~yHG~t~~als~~~ 159 (451)
T PRK07678 90 PAIKLAEKLNEWLGGEY--------VIFFSNSGSEANETAFKIARQYHAQ-KGEPH-RYKFISRYRAYHGNSMGALAATG 159 (451)
T ss_pred HHHHHHHHHHHhCCCCC--------EEEEeCCcHHHHHHHHHHHHHHHHh-cCCCC-CcEEEEECCCcCCccHHHhhcCC
Confidence 44557777888775432 4799999999999999999975322 12111 22334344444543333333322
Q ss_pred CC---------CCCEEEEecCCCCCccc---------CH---HHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144 197 ID---------RKNIRAIKTTKSSSYGL---------SA---ESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---- 251 (502)
Q Consensus 197 lg---------~~~v~~v~~~~~~~~~~---------d~---~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---- 251 (502)
.. ...+..+|... .++. |. +.+++.|+.. .+..+.+|++.-.....|.+-|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPiqg~gG~~~~~~~f 235 (451)
T PRK07678 160 QAQRKYKYEPLAPGFLHVPPPD--CYRMPGIESEDIYDLECVKEIDRVMTWE--LSETIAAVIMEPIITGGGVLMPPQDY 235 (451)
T ss_pred CcccccccCCCCCCCEEeCCCc--cccccccCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHH
Confidence 10 11234444321 1111 12 2355556421 1234566777655555677755
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCccc
Q 037144 252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQY 330 (502)
Q Consensus 252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~y 330 (502)
+++|.++|++||+.+++|.++.|+.....-+..-..|+ ..|.++++ |.++.. +..|.+++++.- .+.+.....+
T Consensus 236 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDivt~g--K~lggG~~Pi~av~~~~~i--~~~~~~~~~~ 310 (451)
T PRK07678 236 MKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDIITMA--KGITSAYLPLSATAVKKEI--YEAFKGKGEY 310 (451)
T ss_pred HHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCEEEee--cccccCCcceeEEEEcHHH--HHHHhccCcc
Confidence 99999999999999999999876633221111111244 58988874 988766 368888886542 2333221110
Q ss_pred --ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecC
Q 037144 331 --LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFP 404 (502)
Q Consensus 331 --l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~ 404 (502)
+.... |+ .+.+..+.+..++++.+..+ .+.++..++.++|.+.|++ .+.+.-+ .
T Consensus 311 ~~~~h~~---------------T~-~gnp~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~~~~~~~~v~~v-r 370 (451)
T PRK07678 311 EHFRHVN---------------TF-GGNPAACALALKNLEIMENE---NLIERSAQLGELLLEQLKEELGEHPLVGDI-R 370 (451)
T ss_pred cccccCC---------------CC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEE-E
Confidence 00000 10 11112223334444444333 3556677777777777743 2321111 1
Q ss_pred CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee--eECCEEEEEEEecCCC
Q 037144 405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA--IVGGIYVLRFAAGNSM 482 (502)
Q Consensus 405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~~g~~~lR~~~~~~~ 482 (502)
-...++.+.+....... . ....+...++.+.+.++|.++.... ...+...+|++.. ..
T Consensus 371 g~Gl~~~i~~~~~~~~~------------------~-~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Pp-l~ 430 (451)
T PRK07678 371 GKGLLVGIELVNDKETK------------------E-PADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPP-LV 430 (451)
T ss_pred eeceEEEEEEecCCccc------------------C-cCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECC-Cc
Confidence 11234444443211000 0 0002335678888888997543211 1123467999864 34
Q ss_pred CcHHHHHHHHHHHHHHHHhC
Q 037144 483 TMESHVRAAWTVVQEHLEAF 502 (502)
Q Consensus 483 t~~~di~~~~~~l~~~~~~~ 502 (502)
.+++|||++++++.++.+++
T Consensus 431 it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 431 ISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 56779999999999987653
No 337
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.35 E-value=6.4e-09 Score=107.95 Aligned_cols=318 Identities=12% Similarity=0.046 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+.+.++.+.|++++.-... ...+|+++||+||..|+..||... + +..+|......|-...-+..+.
T Consensus 85 ~~~~~lae~L~~~~p~~~~------~~v~f~~SGseA~e~AiklAr~~t----g----r~~ii~~~~~YHG~t~~als~s 150 (445)
T PRK08593 85 EPLVRLAKKLCELAPGDFE------KRVTFGLSGSDANDGIIKFARAYT----G----RPYIISFTNAYHGSTYGSLSMS 150 (445)
T ss_pred HHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHhh----C----CCeEEEECCCcCCCcHHHHhhc
Confidence 4445566777777642210 157999999999999999998752 1 2234444445565544444333
Q ss_pred CCC----------CCCEEEEecCCCCC---cccCH-------HHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144 196 GID----------RKNIRAIKTTKSSS---YGLSA-------ESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---- 251 (502)
Q Consensus 196 Glg----------~~~v~~v~~~~~~~---~~~d~-------~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---- 251 (502)
+.. ...++.+|...... ...+. +++++.+.... ....+.+|++.......|.+-|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavI~EPv~g~gG~~~~~~~y 229 (445)
T PRK08593 151 GISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYL-PADEVACIVIETIQGDGGLLEPVPGY 229 (445)
T ss_pred CCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhc-CCCceEEEEEccccCCCCCcCCCHHH
Confidence 310 11244555431100 01122 33444333211 1123556777666666787766
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccc
Q 037144 252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYL 331 (502)
Q Consensus 252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl 331 (502)
+++|.++|++||+++++|.++.|+......+.....++ ..|.+++ .|.++..+..|+++.++. . .+.+.. ..+.
T Consensus 230 l~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv-~pDi~t~--gK~l~~G~p~gav~~~~~-i-~~~~~~-~~~~ 303 (445)
T PRK08593 230 FEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNI-TPDLMSF--GKSLAGGMPMSAIVGRKE-I-MESLEA-PAHL 303 (445)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCC-CCCEeee--cccccCCcccEEEEEcHH-H-Hhhhcc-CCCC
Confidence 99999999999999999999866532211111111133 4687765 588875566788777633 2 223321 1111
Q ss_pred cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCC--Cee
Q 037144 332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFPR--NFS 408 (502)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~~--~~~ 408 (502)
. |. .+.+....+..++++.+-.+ +++++..++.++|++.|+++ ....++... ...
T Consensus 304 ~------------------T~-~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl 361 (445)
T PRK08593 304 F------------------TT-GANPVSCAAALATIDMIEDE---SLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGL 361 (445)
T ss_pred C------------------CC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccce
Confidence 1 10 11111223344455544332 45667777777777777653 111122111 112
Q ss_pred EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144 409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV 488 (502)
Q Consensus 409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di 488 (502)
++.+.+...... . .........+...+.++|.++ .+. +...+|++.. ...+++||
T Consensus 362 ~~gi~l~~~~~~-------------------~-~~~~~~~~~~~~~~~~~Gv~~-~~~---~~~~lr~~p~-l~~t~~~i 416 (445)
T PRK08593 362 SIGIDIVSDKKL-------------------K-TRDNEAALKICNYCFEHGVVI-IAV---AGNVLRFQPP-LVITYEQL 416 (445)
T ss_pred EEEEEEecCCCc-------------------C-CCcHHHHHHHHHHHHHCCeEE-ecc---CCCEEEEECC-CccCHHHH
Confidence 233333221000 0 000233456788888889643 221 2357999875 45667799
Q ss_pred HHHHHHHHHHHHh
Q 037144 489 RAAWTVVQEHLEA 501 (502)
Q Consensus 489 ~~~~~~l~~~~~~ 501 (502)
+++++++.++.++
T Consensus 417 d~~~~~l~~~l~~ 429 (445)
T PRK08593 417 DTALNTIEQAFTA 429 (445)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987654
No 338
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.34 E-value=5.9e-09 Score=107.51 Aligned_cols=317 Identities=13% Similarity=0.043 Sum_probs=169.6
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+...++.+.+.+++.-+.. ...+|++|||+|+..|+..||... + +..+|......|-...-+..+.
T Consensus 83 ~~~~~la~~l~~~~p~~~~------~~v~f~~SGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~~~~~~ 148 (425)
T PRK07495 83 ENYVRLAERLNALVPGDFA------KKTIFVTTGAEAVENAVKIARAAT----G----RSAVIAFGGGFHGRTFMGMSLT 148 (425)
T ss_pred HHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHhh----C----CCeEEEECCCcCCccHHHhhhc
Confidence 3444567777887642210 157999999999999999998751 1 2224444544554332222222
Q ss_pred CC--------C--CCCEEEEecCCCCCcccC----HHHHHHHHHHHHhcCCccEEEEEecCCccccccC----ChhHHHH
Q 037144 196 GI--------D--RKNIRAIKTTKSSSYGLS----AESVLSQINLDVEAELIPLFLCATVGTTAITAVD----PLKPLCD 257 (502)
Q Consensus 196 Gl--------g--~~~v~~v~~~~~~~~~~d----~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id----pl~eI~~ 257 (502)
|. + ...+..+|.+.+.+ .++ ++++++.++... .+..+.+|++.......|.+- -+++|.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~ 226 (425)
T PRK07495 149 GKVVPYKVGFGAMMPDVYHVPFPVELH-GVSVEQSLAALDKLFKADV-DPQRVAAIIIEPVQGEGGFYPAPAAFMKALRE 226 (425)
T ss_pred CCCcccccCCCCCCCCeEEecCCcccc-cccHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHH
Confidence 21 1 11455666543211 233 344466554311 123355666665444566553 3899999
Q ss_pred HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCC
Q 037144 258 VAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATD 337 (502)
Q Consensus 258 i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~ 337 (502)
+|++||+++++|.++.++.....-+.....++ ..|.+++ .|.++..+..|+++.++. . .+.+... ....
T Consensus 227 l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv-~pDi~tl--sK~l~~G~pigav~~~~~-i-~~~~~~~--~~~~---- 295 (425)
T PRK07495 227 LCDQHGILLIADEVQTGFARTGKLFAMEHHEV-AADLTTM--AKGLAGGFPLAAVTGRAE-I-MDAPGPG--GLGG---- 295 (425)
T ss_pred HHHHcCCEEEEechhhcCCcCCCceeecccCC-CCCEEee--hhhhcCCccceEEEEcHH-H-HhccCCC--CcCC----
Confidence 99999999999999976533221111101122 4676665 599876677888887543 2 2222111 1100
Q ss_pred CCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeEEEEE
Q 037144 338 QEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFPRNFSLVCFR 413 (502)
Q Consensus 338 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~~~~~~v~f~ 413 (502)
++ .+.+..+....++++.+..+ ++.++..++.++|+++|+++ |.+.-+.- ...++.+.
T Consensus 296 -------------T~-~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG-~Gl~~~ie 357 (425)
T PRK07495 296 -------------TY-GGNPLGIAAAHAVLDVIEEE---DLCERANQLGNRLKQRLASLRETVPEIADIRG-PGFMNAVE 357 (425)
T ss_pred -------------CC-CCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHhhCCCeeeeec-CceEEEEE
Confidence 11 11111222233455554332 35566666777777776543 32211111 12344444
Q ss_pred eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHH
Q 037144 414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWT 493 (502)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~ 493 (502)
+.+.... .. .......+.+.+.++|.+..... .. ..++|+... ...+++++|++++
T Consensus 358 l~~~~~~------------------~~---~~~~~~~~~~~~~~~Gvl~~~~g-~~-~~~~r~~Pp-l~it~~~id~~~~ 413 (425)
T PRK07495 358 FNDADSG------------------LP---SAEFANRVRLKALEKGLILLTCG-VH-GNVIRFLAP-ITIQDDVFAEALD 413 (425)
T ss_pred EecCCCC------------------Cc---cHHHHHHHHHHHHHCCeEEeecC-CC-CCEEEEeCC-CccCHHHHHHHHH
Confidence 4332100 00 01234577888888897543221 11 357999853 4578889999999
Q ss_pred HHHHHHHh
Q 037144 494 VVQEHLEA 501 (502)
Q Consensus 494 ~l~~~~~~ 501 (502)
.|.++.++
T Consensus 414 ~l~~~l~~ 421 (425)
T PRK07495 414 ILEASILE 421 (425)
T ss_pred HHHHHHHH
Confidence 99988764
No 339
>PRK05965 hypothetical protein; Provisional
Probab=99.34 E-value=3.9e-09 Score=109.89 Aligned_cols=329 Identities=12% Similarity=0.068 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+...++.+.|.+++.-+. ...+|+++||+|+-.|++.||.....+ |..+ +..+|......|-...-+....
T Consensus 90 ~~~~~lae~L~~~~p~~~-------~~v~f~~sGSEAve~AlKlAr~~~~~~-g~~~-r~kii~~~~~YHG~t~~a~s~t 160 (459)
T PRK05965 90 EPAIRLAAKLAERAPGSL-------NHVYFTLGGSDAVDSAVRFIRHYWNAT-GRPS-KKQFISLERGYHGSSSVGAGLT 160 (459)
T ss_pred HHHHHHHHHHHhhCCCCc-------CEEEEeCChhHHHHHHHHHHHHHHHhc-CCCC-ccEEEEecCCcCcccHHHHHhc
Confidence 344456677777763211 257999999999999999999764221 1111 1224444444564333232332
Q ss_pred CC-------C--CCCEEEEecCCC--CCcccC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----h
Q 037144 196 GI-------D--RKNIRAIKTTKS--SSYGLS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----L 252 (502)
Q Consensus 196 Gl-------g--~~~v~~v~~~~~--~~~~~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l 252 (502)
|. | ...+..+|.... ..+.-| +++|++.|... ....+.+|++.-.....|.+-| +
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAAvIvEPiqg~gG~~~p~~~yl 238 (459)
T PRK05965 161 ALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL--GADNVAAFFCEPIQGSGGVIVPPKGWL 238 (459)
T ss_pred CCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCCCCccCCHHHH
Confidence 21 1 122344443210 001113 25677777532 1133556666654445566533 8
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCcc--
Q 037144 253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQ-- 329 (502)
Q Consensus 253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~-- 329 (502)
++|.++|++||+.+++|..+.|+.....-+.....++ ..|.++++ |.++..+ ..|.++++++- .+.+.....
T Consensus 239 ~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--Kgl~gG~~Pi~av~~~~~i--~~~~~~~~~~~ 313 (459)
T PRK05965 239 KAMREACRELGILFVADEVITGFGRTGPLFACEAEGV-VPDLMTVA--KGLTSGYVPMGAVLMSDHV--YQGIADGAGAA 313 (459)
T ss_pred HHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCC-CCCeEEec--hhhccCCcceeEEEEcHHH--HHHHhcccccc
Confidence 8999999999999999999877643322221112244 58999986 8887664 68888876542 223321110
Q ss_pred -cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--C
Q 037144 330 -YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR--N 406 (502)
Q Consensus 330 -yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~--~ 406 (502)
.+.... |. .+.+.......++++.+-++ ++.++..++.++|.+.|+++....++... .
T Consensus 314 ~~~~h~~---------------T~-~gnpl~~Aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~ 374 (459)
T PRK05965 314 APVGHGY---------------TY-SAHPVSAAVGLEVLRLYHEG---GLLANGQKAGPRFAAGLDALRAHPLVGDVRGR 374 (459)
T ss_pred ccccccC---------------CC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEeec
Confidence 000000 10 11122223333444444333 45677788888888888765222122111 1
Q ss_pred eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144 407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES 486 (502)
Q Consensus 407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~ 486 (502)
..++.+.+....... ...........++.+.+.++|.++. + .+..++|++.. ...+++
T Consensus 375 Gl~~gie~~~~~~~~-----------------~~~~~~~~~~~~i~~~~~~~Gll~~-~---~g~~~i~~~Pp-L~it~~ 432 (459)
T PRK05965 375 GLLGALELVADKATK-----------------TPFDAALDPADRIFDRAYANGLVFR-A---FGDGVLGFAPA-LCCTEG 432 (459)
T ss_pred ceEEEEEEecccccc-----------------CCCCchhHHHHHHHHHHHhCCeEEE-e---cCCcEEEEECC-CcCCHH
Confidence 223344443211000 0000001235677788888897542 2 23457898853 446778
Q ss_pred HHHHHHHHHHHHHHh
Q 037144 487 HVRAAWTVVQEHLEA 501 (502)
Q Consensus 487 di~~~~~~l~~~~~~ 501 (502)
||+++++.+.+..++
T Consensus 433 ei~~~~~~l~~~l~~ 447 (459)
T PRK05965 433 EFDLIFERTRKTLDD 447 (459)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999887754
No 340
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.34 E-value=1.2e-09 Score=112.68 Aligned_cols=319 Identities=13% Similarity=0.040 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH---HHHH
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF---QKAA 192 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~---~~aa 192 (502)
+.+.++.+.|.++++.... ...|+++||+|+..|+..||... | +..+|......|-.. ..+.
T Consensus 93 ~~~~~la~~L~~~~~~~~~-------~v~f~~SGsEA~e~AiklAr~~t----g----r~~ii~~~~~yHG~td~~~~~~ 157 (433)
T PRK00615 93 EQEILFAEELFSYLGLEDH-------KIRFVSSGTEATMTAVRLARGIT----G----RSIIIKFLGCYHGHADTLLQGI 157 (433)
T ss_pred HHHHHHHHHHHHhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhh----C----CCEEEEEcCccCCCCcccCccc
Confidence 3455677788888754322 57999999999999999999752 1 222333344445422 1111
Q ss_pred HHcCCCCCCE-EEEecCCCCCc-----ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCCh----hHHHHHHHHh
Q 037144 193 QIVGIDRKNI-RAIKTTKSSSY-----GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPL----KPLCDVAKQF 262 (502)
Q Consensus 193 ~~~Glg~~~v-~~v~~~~~~~~-----~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl----~eI~~i~~~~ 262 (502)
...+-..... ........... .-|+++|++.+.+.. ..+.+|++.......|.+-|. ++|.++|++|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~ 234 (433)
T PRK00615 158 SFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLG---HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRT 234 (433)
T ss_pred ccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcC---CceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHc
Confidence 1111100000 00000000000 127899999886432 335577777766777888775 4999999999
Q ss_pred CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCC-cccccCccCCCCCc
Q 037144 263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTN-PQYLKNEATDQEPK 341 (502)
Q Consensus 263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~ 341 (502)
|+.+++|.++.|+ ...........++ ..|.+++ .|.++..+..|+++.++. . .+.+... ..+....
T Consensus 235 g~llI~DEv~tG~-R~G~~ga~~~~gv-~PDi~~~--gK~lggG~p~~av~~~~~-i-~~~~~~~~~~~~~~T------- 301 (433)
T PRK00615 235 GSLSIMDEVVTGF-RVAQGGAAAIYHV-KPDITVY--GKILGGGLPAAAVVAHKS-I-MDHLAPEGTIFQAGT------- 301 (433)
T ss_pred CCEEEEEcccccc-cccHhHHHHhcCC-CCCeEEE--cccccCCcceeeeeecHH-H-HhhhcCCCCcccCCC-------
Confidence 9999999999655 2221111111234 5788775 699876566777777544 2 2233211 1111110
Q ss_pred ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCeeEEEEEeecCc
Q 037144 342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVAFPRNFSLVCFRVTPSA 418 (502)
Q Consensus 342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~~~~~~~~v~f~~~~~~ 418 (502)
. .+.+..+.+..++++.+..+ +.+++..++.++|.++|++. .++.+.......++.+.+....
T Consensus 302 ----------~-~g~p~~~aa~la~L~~i~~~---~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~ 367 (433)
T PRK00615 302 ----------L-SGNPLAMAAGKASINLCREQ---GFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENR 367 (433)
T ss_pred ----------C-cccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeceEEEEEEeCCC
Confidence 0 01122233444455555333 34666666777776555441 1332211112234445543221
Q ss_pred chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
.. +... ......+....+...+.++|.+ +.+..... . .++.-+ +++|||++++++.++
T Consensus 368 ~~----------~~~~-----~~~~~~~~~~~~~~~l~~~Gv~-~~~~~~~~-~----~ls~~h-t~~did~~~~a~~~~ 425 (433)
T PRK00615 368 PN----------NLAE-----AQLSDIEAFQTFYQSAFSKGVY-LSPSPFEA-S----FLSSAH-SMENLDYAQNVLIDS 425 (433)
T ss_pred CC----------ChHH-----HhhCCHHHHHHHHHHHHHCCee-ecCccccc-c----ceecCC-CHHHHHHHHHHHHHH
Confidence 00 0000 0000123456788888889964 33322111 1 222223 566999999999998
Q ss_pred HHh
Q 037144 499 LEA 501 (502)
Q Consensus 499 ~~~ 501 (502)
+++
T Consensus 426 ~~~ 428 (433)
T PRK00615 426 LEK 428 (433)
T ss_pred HHH
Confidence 764
No 341
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.33 E-value=3e-09 Score=109.82 Aligned_cols=314 Identities=12% Similarity=0.061 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCe-EEEeCCCCchhHHHHHHH
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKL-VVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~aa~~ 194 (502)
+.+.++.+.|++++..... ...+|+++||+|+..|+..||... ++. +|......|-...-+..+
T Consensus 83 ~~~~~la~~l~~~~p~~~~------~~~~f~~sGseA~e~AlklAr~~t---------gr~~ii~~~~~yHG~t~~~~s~ 147 (421)
T PRK09792 83 ESYVTLAEKINALAPVSGQ------AKTAFFTTGAEAVENAVKIARAHT---------GRPGVIAFSGGFHGRTYMTMAL 147 (421)
T ss_pred HHHHHHHHHHHHhCCCCCC------ceEEEeCChHHHHHHHHHHHHHhc---------CCCeEEEECCCcCCccHHHHhh
Confidence 3445566777777643211 157899999999999999998641 223 333444455433223232
Q ss_pred cCC--------C--CCCEEEEecCCCCCccc----CHHHHHHHHHHHHhcCCccEEEEEecCCccccccC-C---hhHHH
Q 037144 195 VGI--------D--RKNIRAIKTTKSSSYGL----SAESVLSQINLDVEAELIPLFLCATVGTTAITAVD-P---LKPLC 256 (502)
Q Consensus 195 ~Gl--------g--~~~v~~v~~~~~~~~~~----d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id-p---l~eI~ 256 (502)
.|. + ...+..+|...+.+ .+ +++.+++.+++.. ....+.+|++.....+.|..- | +++|.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~v~~p~~~~-~~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~ 225 (421)
T PRK09792 148 TGKVAPYKIGFGPFPGSVYHVPYPSDLH-GISTQDSLDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNVAPKELVAAIR 225 (421)
T ss_pred cCCCcccccCCCCCCCCcEEcCCCcccc-cccHHHHHHHHHHHHHhcc-CCCceEEEEEccccCCCCCccCCHHHHHHHH
Confidence 221 1 11344555432111 12 3467777775421 123356777777677778653 5 99999
Q ss_pred HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccC
Q 037144 257 DVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEAT 336 (502)
Q Consensus 257 ~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~ 336 (502)
++|++||+++++|.++.++......+....-++ ..|.+++ .|.++..+..|+++.++. . .+.+... ....
T Consensus 226 ~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pDi~t~--gK~l~~G~pigav~~~~~-i-~~~~~~~--~~~~--- 295 (421)
T PRK09792 226 RLCDEHGIVMIADEVQSGFARTGKLFAMDHYAD-KPDLMTM--AKSLAGGMPLSGVVGNAN-I-MDAPAPG--GLGG--- 295 (421)
T ss_pred HHHHHcCCEEEEeccccCCCCCCchhHHHhcCC-CCcEEEe--ehhhcCCCceEEEEEcHH-H-HhccCCC--CcCC---
Confidence 999999999999999987643221111000122 5676555 699987777888877533 2 2222110 0000
Q ss_pred CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCC-eeEEE
Q 037144 337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRN-FSLVC 411 (502)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~-~~~v~ 411 (502)
|+ .+.+....+..++++.+..+ +.+++..++.+++.+.|++ .|.+ ..... ..++.
T Consensus 296 --------------T~-~gnpl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~p~v--~~vrG~Gl~~~ 355 (421)
T PRK09792 296 --------------TY-AGNPLAVAAAHAVLNIIDKE---SLCERANQLGQRLKNTLIDAKESVPAI--AAVRGLGSMIA 355 (421)
T ss_pred --------------CC-CCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhCCCc--ceecccceEEE
Confidence 11 11111222233455554333 4555666677777776654 3322 11122 23444
Q ss_pred EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHH
Q 037144 412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAA 491 (502)
Q Consensus 412 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~ 491 (502)
+.+.+... .... .....++.+.+.++|.++. +. -....++|+... ...++++|+++
T Consensus 356 ie~~~~~~--------------------~~~~-~~~~~~l~~~~~~~Gv~i~-~~-g~~~~~irl~P~-l~i~~~ei~~~ 411 (421)
T PRK09792 356 AEFNDPQT--------------------GEPS-AAIAQKIQQRALAQGLLLL-TC-GAYGNVIRFLYP-LTIPDAQFDAA 411 (421)
T ss_pred EEecCCcc--------------------CCcc-hHHHHHHHHHHHHCCcEEe-ec-CCCCCEEEEeCC-CcCCHHHHHHH
Confidence 55532210 0000 1235678888888997542 21 111368999864 33567799999
Q ss_pred HHHHHHHHH
Q 037144 492 WTVVQEHLE 500 (502)
Q Consensus 492 ~~~l~~~~~ 500 (502)
++.|.++++
T Consensus 412 ~~~l~~~l~ 420 (421)
T PRK09792 412 MKILQDALS 420 (421)
T ss_pred HHHHHHHHh
Confidence 999988764
No 342
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.32 E-value=5.1e-09 Score=109.08 Aligned_cols=316 Identities=12% Similarity=0.040 Sum_probs=164.0
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+.+.++.+.|.+++.-+.. ...+|++|||+|+..|+..||... . +..+|-.....|-...-+..+.
T Consensus 97 ~~~~~la~~L~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t-g-------r~~ii~~~~~yHG~t~~~ls~~ 162 (451)
T PRK06918 97 EPYIELAEKLAALAPGSFD------KKVLFLNSGAEAVENAVKIARKYT-K-------RQGIISFSRGFHGRTLMTMTMT 162 (451)
T ss_pred HHHHHHHHHHHHhCCCCCC------CEEEEcCCcHHHHHHHHHHHHHHh-C-------CCcEEEECCCcCccchhhhhhc
Confidence 4455677778888743211 157999999999999999998752 1 2223334444454333333322
Q ss_pred CC--------C--CCCEEEEecCCC--CCcccC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccC----C
Q 037144 196 GI--------D--RKNIRAIKTTKS--SSYGLS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVD----P 251 (502)
Q Consensus 196 Gl--------g--~~~v~~v~~~~~--~~~~~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id----p 251 (502)
|- + ...+..+|.... ....+. .+.+++.+.... .+..+.+|++.-.....|.+- -
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~EPi~g~gG~~~~~~~~ 241 (451)
T PRK06918 163 SKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEV-APETIAAVVMEPVQGEGGFIVPSKKF 241 (451)
T ss_pred CCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhc-CCCceEEEEECcccCCCCCccCCHHH
Confidence 21 0 112344443210 000111 223444332111 223355666654444446542 2
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccc
Q 037144 252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYL 331 (502)
Q Consensus 252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl 331 (502)
+++|.++|++||++++.|..+.++......+....-++ ..|.++ +.|.++..+..|+++.++. . .+.+... ..
T Consensus 242 l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v-~pDi~t--~sK~l~~G~pig~v~~~~~-i-~~~~~~~--~~ 314 (451)
T PRK06918 242 VQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDV-VPDLIT--VSKSLGAGVPISGVIGRKE-I-MDESAPG--EL 314 (451)
T ss_pred HHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCC-CCCEEe--eehhhcCCCccEEEEEcHH-H-HhccCCC--Cc
Confidence 88999999999999999999977643221111001122 367554 5699987788899887533 2 2222111 00
Q ss_pred cCccCCCCCcccccCCCcccccCCCCCCchHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecC
Q 037144 332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV---VIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFP 404 (502)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~ 404 (502)
.. ++ ++ ..+...+ ++..+..+. ..++..++.+++.++|+++ |.+.-+ .
T Consensus 315 ~~-----------------T~-~g---~~l~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~l~~l~~~~~~~~~v-r 369 (451)
T PRK06918 315 GG-----------------TY-AG---SPLGCAAALAVLDIIEKEN---LNDRAIELGKVVMNRFEEMKNKYNCIGDV-R 369 (451)
T ss_pred Cc-----------------CC-Cc---CHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHhhCCCceee-c
Confidence 00 00 11 2333333 444332333 3444555556666666543 322212 2
Q ss_pred CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCc
Q 037144 405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTM 484 (502)
Q Consensus 405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~ 484 (502)
....++.+.+..+... ... .......+.+.+.++|..+.+...+ ..++|+++.. ..+
T Consensus 370 g~G~~~~~~~~~~~~~-----------------~~~---~~~~~~~l~~~~~~~Gvlv~~~~~~--~~~lrl~p~l-~~t 426 (451)
T PRK06918 370 GLGAMCAFELVQDRKT-----------------KEP---DKTLTANICKEANKRGLLLLSAGTY--GNVIRVLMPL-VIT 426 (451)
T ss_pred cceeEEEEEEccCCCc-----------------CCC---cHHHHHHHHHHHHHCCeEEeecCCC--CCEEEEECCC-ccC
Confidence 2334445444211000 000 0234567788888889765443222 2579998743 256
Q ss_pred HHHHHHHHHHHHHHHHh
Q 037144 485 ESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 485 ~~di~~~~~~l~~~~~~ 501 (502)
+++|+++++.|.+++++
T Consensus 427 ~~~id~~l~~l~~~l~~ 443 (451)
T PRK06918 427 DEQLEEGLTIIEESLQA 443 (451)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77999999999987754
No 343
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.31 E-value=1.3e-10 Score=111.68 Aligned_cols=305 Identities=11% Similarity=0.086 Sum_probs=188.5
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR 199 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~ 199 (502)
.+.+.+++++|+++++ +-+-|-.++..++-+... +++++++.+..+..+.++.++.--
T Consensus 143 dlE~~iakF~G~E~ai---------vYs~gF~ti~S~ipafsK-----------rGDIi~~de~~nfaIq~GlqlSRS-- 200 (467)
T KOG1358|consen 143 DLEKRIAKFMGTEDAI---------VYSYGFSTIESAIPAFSK-----------RGDIIFVDEAVNFAIQKGLQLSRS-- 200 (467)
T ss_pred ccHHHHHHhhCCccee---------eeccccchhhhcchhhhc-----------cCcEEEEehhhhHHHHHHHhhhhh--
Confidence 3345588999998753 333222223223333222 678999999999999998886655
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHHH----hcCCc---cEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 200 KNIRAIKTTKSSSYGLSAESVLSQINLDV----EAELI---PLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~----~~g~~---p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
.++....+ |.++||..+.+.+ +..++ ..+|++..-.-++|.+.|+.+|.++..||...+++|..+
T Consensus 201 -~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~ 272 (467)
T KOG1358|consen 201 -TISYFKHN-------DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESL 272 (467)
T ss_pred -eeEEecCC-------CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEeccc
Confidence 77777643 7778877765433 22221 346778788889999999999999999999999999988
Q ss_pred ccccccCccch----hhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchh-hhhhhcCCcccccCccCCCCCcccccCC
Q 037144 273 AGSACICPEFR----HFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSC-LLSTLSTNPQYLKNEATDQEPKEQEVGY 347 (502)
Q Consensus 273 g~~~~~~~~~~----~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~-l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 347 (502)
..+.+.. ..+ +.-.++..+|.++.+.--.+. ..|.+++.+... ..+.++. ..|.++....
T Consensus 273 SfG~lg~-~GrGvteH~~v~~~~iDiv~~sm~~ala---s~GgFc~G~~~i~~hQrLSg-~~Y~fSAslP---------- 337 (467)
T KOG1358|consen 273 SFGVLGK-TGRGVTEHFGVPITDIDIVTASMETALA---SGGGFCAGKSFIADHQRLSG-SGYCFSASLP---------- 337 (467)
T ss_pred ccccccc-cCccccccCCCCccceeeeeeccccccc---ccCceeecceeeEeeeeccc-cceeeeccCc----------
Confidence 6665432 111 112235688999988665553 233333332211 1111111 1233321110
Q ss_pred CcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcc
Q 037144 348 KDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKY 427 (502)
Q Consensus 348 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~ 427 (502)
+..+-++..++..+ ++-.++++........+.+.++...++++.+.+.++++-..+.+..
T Consensus 338 ---------p~la~aa~~ai~i~--~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~--------- 397 (467)
T KOG1358|consen 338 ---------PYLAGAAIKAILIE--EWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSY--------- 397 (467)
T ss_pred ---------hhhhhhHHHHHHHH--hhCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccc---------
Confidence 01112222333332 3334567777788888889998888899999999998887776532
Q ss_pred cCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 428 KNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.+.++...+-+++.++...++.......... -..-||+|+..- -++++|+++.+.|++.+..
T Consensus 398 -----------~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~-~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 398 -----------GSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAG-MSEEELERAAELIKEVASA 465 (467)
T ss_pred -----------cchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCC-CCHHHHHHHHHHHHHHHHh
Confidence 1223334455677777666665433222221 134799998644 5667999999999998764
No 344
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.30 E-value=1.6e-08 Score=105.09 Aligned_cols=315 Identities=10% Similarity=0.074 Sum_probs=171.0
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G 196 (502)
...++.+.|.++++-+-. ..+|+++||+|+..|+..||.....+ +..+ +.-+|......|-...-+..+.|
T Consensus 98 ~~~~lAe~L~~~~p~~~~-------~v~f~~sGseAve~AlKlA~~~~~~r-g~~~-r~~Ii~~~~~yHG~t~gals~~~ 168 (453)
T PRK06943 98 PAIELAERLAALTGGTLG-------HAFFASDGASAVEIALKMSFHAWRNR-GRGD-KREFVCLANGYHGETIGALGVTD 168 (453)
T ss_pred HHHHHHHHHHHhCCCCCC-------EEEEeCCCHHHHHHHHHHHHHHHHHh-CCCC-CCEEEEECCCcCCCcHHhhcccC
Confidence 445567777777653211 57999999999999999998754322 1111 22344444445543322322222
Q ss_pred CC---------CCCEEEEecCCCCC--c--------ccCHHHHHHHHHHHHhcCCccEEEEEec-CCccccccC----Ch
Q 037144 197 ID---------RKNIRAIKTTKSSS--Y--------GLSAESVLSQINLDVEAELIPLFLCATV-GTTAITAVD----PL 252 (502)
Q Consensus 197 lg---------~~~v~~v~~~~~~~--~--------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt~~G~id----pl 252 (502)
-. ...+..+|...... . .-++++|++.+.. .+..+.+|++.- .....|.+- =+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAviiEPvvqg~gG~~~~~~~yl 245 (453)
T PRK06943 169 VALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAE---RAGKIAALIVEPLVQCAAGMAMHDPSYL 245 (453)
T ss_pred ChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEeccccccCCcccCCHHHH
Confidence 10 01233444321000 0 0134677777753 223455666654 244456653 38
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCc---
Q 037144 253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNP--- 328 (502)
Q Consensus 253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~--- 328 (502)
++|.++|++||+.+++|..+.|+.....-+.....++ ..|.++++ |.++..+ +.|.++++++- .+.+....
T Consensus 246 ~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv-~PDivt~g--Kgl~gG~~Pi~av~~~~ei--~~~~~~~~~~~ 320 (453)
T PRK06943 246 RGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGV-WPDFLCLS--KGISGGYLPLSLVLSRDAI--FAAFYDDDVTR 320 (453)
T ss_pred HHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCC-CCCeEeee--hhhccCcccceEEEEcHHH--HHhhcccCccC
Confidence 9999999999999999999877643322121112244 58999985 8887663 68888876542 22332110
Q ss_pred ccccCccCCCCCcccccCCCcccccCCCCCCchHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEe
Q 037144 329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV---VIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVA 402 (502)
Q Consensus 329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~ 402 (502)
.++.. .+-...++.+.+ ++..+-++ +++++..++.++|.+.|+++ +.+.-+
T Consensus 321 ~~~~~--------------------~T~~gnpl~~aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~~v 377 (453)
T PRK06943 321 GFLHS--------------------HSYTGNPLACRAALATLDLFAED---DVLARNARKSARLRAALAPLAAHPQVRHL 377 (453)
T ss_pred CccCC--------------------CCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCEEeE
Confidence 01000 010113343333 34444332 45667777778888877654 333211
Q ss_pred cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCC
Q 037144 403 FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSM 482 (502)
Q Consensus 403 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~ 482 (502)
.-...++.+.+..... . ...+..++.+.+.++|.++... + ..+|++.. ..
T Consensus 378 -rG~Gl~~gvel~~~~~--------------------~---~~~~~~~i~~~~~~~Gll~~~~----g-~~l~~~Pp-l~ 427 (453)
T PRK06943 378 -RQRGTIFAFDVALDGD--------------------A---ARTFSRRFFEAALERELLLRPI----G-TTVYLMPP-YV 427 (453)
T ss_pred -eccccEEEEEEccCCC--------------------c---chHHHHHHHHHHHHCCcEEEec----C-CEEEEeCC-Cc
Confidence 0111233343331100 0 0233567788888889754221 2 35898843 44
Q ss_pred CcHHHHHHHHHHHHHHHHh
Q 037144 483 TMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 483 t~~~di~~~~~~l~~~~~~ 501 (502)
.+++|||++++.|.+.+++
T Consensus 428 it~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 428 LDDDEIAWLAERTRATLDA 446 (453)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 6778999999999887654
No 345
>PRK07481 hypothetical protein; Provisional
Probab=99.30 E-value=7.9e-09 Score=107.38 Aligned_cols=331 Identities=11% Similarity=0.023 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+.+.++.+.|.++++-+ .. ...+|++|||+|+..|++.||..... .+..+ +..+|......|-...-+....
T Consensus 86 ~~~~~lae~L~~~~~~~-~~-----~~v~f~~sGsEAve~AlklAr~~~~~-~g~~~-r~~ii~~~~~yHG~t~ga~s~~ 157 (449)
T PRK07481 86 PRAIELSYELIDMFAPE-GM-----RRVFFSSGGSDSVETALKLARQYWKV-RGQPE-RTKFISLKQGYHGTHFGGASVN 157 (449)
T ss_pred HHHHHHHHHHHHhcCCC-CC-----CEEEEcCchHHHHHHHHHHHHHHHHh-cCCCC-CcEEEEECCCcCCcchhhhccC
Confidence 44556777788887421 11 25799999999999999999875321 12111 2234444444554332222222
Q ss_pred CCC---------CCCEEEEecCCCC--Ccc-cCHHHHHHHHHHH----H--hcCCccEEEEEecCCccccccCC----hh
Q 037144 196 GID---------RKNIRAIKTTKSS--SYG-LSAESVLSQINLD----V--EAELIPLFLCATVGTTAITAVDP----LK 253 (502)
Q Consensus 196 Glg---------~~~v~~v~~~~~~--~~~-~d~~~Le~~i~~~----~--~~g~~p~~Vv~t~gtt~~G~idp----l~ 253 (502)
|-. ...+..++....- .+. -|++.+++.+.+. . ..+..+.+|++.......|.+-| ++
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~ 237 (449)
T PRK07481 158 GNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWP 237 (449)
T ss_pred CCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHH
Confidence 110 0123334322100 011 2455544333211 1 12234667777765556677655 99
Q ss_pred HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCcc---
Q 037144 254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQ--- 329 (502)
Q Consensus 254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~--- 329 (502)
+|.++|++||+.+++|..+.|+.....-+.....++ ..|.++++ |.++..+ +.|.+++++. . .+.+.....
T Consensus 238 ~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--Kgl~gG~~Pi~av~~~~~-i-~~~~~~~~~~~~ 312 (449)
T PRK07481 238 LVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGV-KPDIMCLA--KGITSGYVPLGATMVNAR-I-ADAFEANADFGG 312 (449)
T ss_pred HHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCC-CCCEEEEe--ecccCCCcCceEEEEcHH-H-HHHHhccCcccc
Confidence 999999999999999999877533221111111234 58988885 9887653 5788887654 2 233321110
Q ss_pred cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--C
Q 037144 330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAFPR--N 406 (502)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~~~--~ 406 (502)
.+.... |. .+.+....+..++++.+.++ +..++..++.++|.+.|+++. ...++... .
T Consensus 313 ~~~h~~---------------T~-~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~ 373 (449)
T PRK07481 313 AIMHGY---------------TY-SGHPVACAAALATLDIVVRE---DLPANAAKRGAYLLEGLQPLKERFELVGDVRGK 373 (449)
T ss_pred ccccCC---------------CC-CCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeec
Confidence 000000 00 11122223333444444333 456667777888887776541 12222111 1
Q ss_pred eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144 407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES 486 (502)
Q Consensus 407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~ 486 (502)
..++.+.+....... ...+........+.+++.++|.++... + ..+|++.. ...+++
T Consensus 374 Glm~gi~l~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~Gvl~~~~----g-~~i~l~Pp-l~it~~ 430 (449)
T PRK07481 374 GLMLALDLVADKATR-----------------EPIDPSKGYANAVADVARENGVLVRPS----G-TKIILSPP-LVIQRE 430 (449)
T ss_pred ceEEEEEeccccccc-----------------CCCCchhHHHHHHHHHHHhCCeEEEec----C-CEEEEECC-CCCCHH
Confidence 223444442210000 000000233456778888889654222 2 24787742 335778
Q ss_pred HHHHHHHHHHHHHHh
Q 037144 487 HVRAAWTVVQEHLEA 501 (502)
Q Consensus 487 di~~~~~~l~~~~~~ 501 (502)
|||++++.+.+..++
T Consensus 431 eid~~~~~l~~~l~~ 445 (449)
T PRK07481 431 DVDRIVDALDAGLSA 445 (449)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988765
No 346
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.30 E-value=2e-09 Score=102.77 Aligned_cols=272 Identities=13% Similarity=0.101 Sum_probs=169.5
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcC-CchHHHHHHHHHHHHHHHHHhCccCCCCeEEE---eCCCCc
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQG-TTCEALLCTLTAARDRVLKKIGRENISKLVVY---SSDQTH 185 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~-ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~---~s~~~H 185 (502)
..--..++|.-+.+.--+.||+++.. .++-+++ +||-||+..-.+... |..+|. .++-.|
T Consensus 80 Gne~ID~iE~LCq~RALeaF~ldp~k-----WGVNVQp~SGSPANfavYtall~-----------Ph~RiMGLDLP~GGH 143 (477)
T KOG2467|consen 80 GNEYIDQIELLCQKRALEAFGLDPEK-----WGVNVQPYSGSPANFAVYTALLK-----------PHERIMGLDLPSGGH 143 (477)
T ss_pred cchHHHHHHHHHHHHHHHHhCCCHHH-----CceeeccCCCCchhhHHHhhhcC-----------CCCeeeeccCCCCCc
Confidence 33456789998999999999997653 1444544 888999755443332 344443 344455
Q ss_pred hhHHHH---HHHcCCCC-CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH
Q 037144 186 CAFQKA---AQIVGIDR-KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ 261 (502)
Q Consensus 186 ~s~~~a---a~~~Glg~-~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~ 261 (502)
.|.--. -++..... =+-....+|+ .+|-||-|.||+.-..- +|.+++ +|++.....-|.+.+.+||.+
T Consensus 144 LsHGy~T~~kkISa~SiyFeSmPYkv~~-~TG~IDYD~Le~~A~~f-----rPk~ii--aG~SaY~R~~DYaR~R~Iad~ 215 (477)
T KOG2467|consen 144 LSHGYQTPTKKISATSIYFESMPYKVDP-STGYIDYDKLEKTATLF-----RPKLII--AGTSAYSRLIDYARFRKIADK 215 (477)
T ss_pred cccccccCCceeeeeeeecccCceeeCC-CCCceehHHHHHHHHhc-----CCcEEE--eccccchhhccHHHHHHHHHh
Confidence 442111 01111100 0011233454 36899999999875543 365554 356667777899999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhh-cCCcccccCccCCCCC
Q 037144 262 FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTL-STNPQYLKNEATDQEP 340 (502)
Q Consensus 262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~-~~~~~yl~~~~~~~~~ 340 (502)
.|+++.+|-||-.+......... -++.+|.||...||.|-+|.+ |++++|..-.-...- .....|-
T Consensus 216 ~gA~Lm~DMAHISgLVAA~vips---PFey~DiVTTTTHKsLRGPRg-~mIFyRkGvk~~~~k~g~~i~yd--------- 282 (477)
T KOG2467|consen 216 VGAYLMADMAHISGLVAAGVIPS---PFEYCDIVTTTTHKSLRGPRG-AMIFYRKGVKSIKPKQGKEILYD--------- 282 (477)
T ss_pred cCceeehhhhhHHHHHhcccCCC---cccccceeeccccccccCCcc-eeEEEeccCCcCCCCCCCcceec---------
Confidence 99999999998655443222111 135899999999999999975 455555431100000 0011121
Q ss_pred cccccCCCc-ccccCCCCCCc-hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecC
Q 037144 341 KEQEVGYKD-WQITLCRRFRS-LKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPS 417 (502)
Q Consensus 341 ~~~~~~~~~-~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~ 417 (502)
.+..+++.- -++|++-.... .++..+|+.-....+.+..++...+++.|.+.|.+. |++++.. ....+|.+.+.|.
T Consensus 283 lE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLvDLr~~ 361 (477)
T KOG2467|consen 283 LEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLVDLRPK 361 (477)
T ss_pred hhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEEecccc
Confidence 112333322 25666655444 466678888778889999999999999999999998 8999853 3345777888776
Q ss_pred cc
Q 037144 418 AV 419 (502)
Q Consensus 418 ~~ 419 (502)
++
T Consensus 362 G~ 363 (477)
T KOG2467|consen 362 GV 363 (477)
T ss_pred CC
Confidence 64
No 347
>PRK07036 hypothetical protein; Provisional
Probab=99.30 E-value=7.5e-09 Score=107.90 Aligned_cols=325 Identities=10% Similarity=0.074 Sum_probs=172.3
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
.+.+.++.+.|.+++.-+. ...+|++|||+|+..|++.||.....+ +..+ +..+|......|-...-+..+
T Consensus 94 ~~~~~~lae~L~~~~p~~~-------~~v~f~~sGseAve~AlklAr~~~~~~-g~t~-r~~Ii~~~~~YHG~t~~a~s~ 164 (466)
T PRK07036 94 NAPAAELAAKLAELAPGDL-------NHVFLTTGGSTAVDSALRFVHYYFNVR-GRPA-KKHIITRGDAYHGSTYLTASL 164 (466)
T ss_pred CHHHHHHHHHHHHhCCCCc-------CEEEEeCCchHHHHHHHHHHHHHHHhc-CCCC-ccEEEEEcCccCCccHhhhcc
Confidence 3445567777777753211 258999999999999999998753221 1111 223344444455443333333
Q ss_pred cCCCC---------CCEEEEecCCC--CCcccC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144 195 VGIDR---------KNIRAIKTTKS--SSYGLS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---- 251 (502)
Q Consensus 195 ~Glg~---------~~v~~v~~~~~--~~~~~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---- 251 (502)
.|... ..+..+|.... ....+. ++.+++.+.. ..+..+.+|++.......|.+-|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~y 242 (466)
T PRK07036 165 TGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGSGGVIVPPPGY 242 (466)
T ss_pred cCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCCCCCccCCHHH
Confidence 22210 12444443210 001111 2345555542 12234667777776666788766
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhh-hcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCC--
Q 037144 252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF-IDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTN-- 327 (502)
Q Consensus 252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~-~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~-- 327 (502)
+++|.++|++||+.+++|.++.|+-....-+... .-++ ..|.++++ |.++..+ +.|.+++++. . .+.+...
T Consensus 243 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv-~PDivt~g--K~l~gG~~Pi~av~~~~~-i-~~~~~~~~~ 317 (466)
T PRK07036 243 HARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGI-QPDIITFA--KGLTSGYQPLGAVIISER-L-LDVISGPNA 317 (466)
T ss_pred HHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCC-CCCEEEEc--cccccCccccEEEEEcHH-H-HHHHhcccC
Confidence 9999999999999999999987653322111110 1133 57888875 9887653 5788887644 2 2333211
Q ss_pred c--ccccCccCCCCCcccccCCCcccccCCCCCCchHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 328 P--QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV---VIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 328 ~--~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
+ .|... .|. ...++.+.+ +++.+.. .++.++..++.++|++.|+++....++
T Consensus 318 ~~~~~~~~----------------~T~----~gnpl~~aaa~a~Le~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~v 374 (466)
T PRK07036 318 KGNVFTHG----------------FTY----SGHPVACAAALKNIEIMER---EGLCEHVREVGPYFEERLASLRELPLV 374 (466)
T ss_pred cCcccccC----------------CCC----CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhccCCCE
Confidence 0 01110 011 113333333 3444322 346677888888888888654222222
Q ss_pred cCC--CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecC
Q 037144 403 FPR--NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGN 480 (502)
Q Consensus 403 ~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~ 480 (502)
... ...++.+.+....... ............+.+.+.++|.+.. +. + ..+|++..
T Consensus 375 ~~vrG~Gl~~~ve~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~Gvl~~-~~---~-~~~~l~Pp- 431 (466)
T PRK07036 375 GDVRGDHLMACVECVADKGSK-----------------ALLPEDIAIGQRIDRHCQERGLLVR-PL---E-HLCVLSPP- 431 (466)
T ss_pred EEEEeeceEEEEEEccCcccc-----------------CCCCchhHHHHHHHHHHHHCCcEEe-ec---C-CEEEEeCC-
Confidence 111 1223444443211000 0000002345567788888897542 21 2 36787642
Q ss_pred CCCcHHHHHHHHHHHHHHHHh
Q 037144 481 SMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 481 ~~t~~~di~~~~~~l~~~~~~ 501 (502)
...+++|||++++.+.++.++
T Consensus 432 l~it~~~id~~~~~l~~al~~ 452 (466)
T PRK07036 432 LIITRAQIDEIVAILRAAIEE 452 (466)
T ss_pred CcCCHHHHHHHHHHHHHHHHH
Confidence 345778999999999877653
No 348
>PRK07482 hypothetical protein; Provisional
Probab=99.29 E-value=1.3e-08 Score=106.07 Aligned_cols=332 Identities=9% Similarity=0.002 Sum_probs=172.3
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQ 193 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~ 193 (502)
++.+.++.+.|.+++.-+- ...+|++|||+|+..|++.||.....+ +.. ++..|+ .....|-...-+..
T Consensus 93 ~~~~~~lAe~L~~~~p~~~-------~~v~f~~sGSEAve~AlKlAr~~~~~~-g~~--~r~~Ii~~~~~YHG~t~ga~s 162 (461)
T PRK07482 93 TEASITLSKRIIDRAPAGM-------SKVYYGLSGSDANETQIKLVWYYNNVL-GRP--EKKKIISRWRGYHGSGVVTGS 162 (461)
T ss_pred CHHHHHHHHHHHHhCCCCc-------CEEEEeCchHHHHHHHHHHHHHHHHhc-CCC--CCceEEEecCccCCccHhhhh
Confidence 4455667777888763211 257899999999999999998753221 211 133343 34444542221222
Q ss_pred Hc---------CCCCCCEEEEecCCCCCc-----------ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC--
Q 037144 194 IV---------GIDRKNIRAIKTTKSSSY-----------GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP-- 251 (502)
Q Consensus 194 ~~---------Glg~~~v~~v~~~~~~~~-----------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp-- 251 (502)
+. +.....+..+|.....+. .-++++|++.+... .+..+.+|++.-.....|.+-|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~~ 240 (461)
T PRK07482 163 LTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPPA 240 (461)
T ss_pred ccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCCH
Confidence 21 111123344433210000 01456777777432 1233556666654444566632
Q ss_pred --hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCc
Q 037144 252 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNP 328 (502)
Q Consensus 252 --l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~ 328 (502)
+++|.++|++||+.+++|..+.|+.....-+.....++ ..|.++++ |.++..+ +.|.++++++ . .+.+....
T Consensus 241 ~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--Kgl~gG~~Pi~av~~~~~-i-~~~~~~~~ 315 (461)
T PRK07482 241 GYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGI-EPDLITVA--KGLTSAYAPLSGSIVGEK-V-WDVLEQGS 315 (461)
T ss_pred HHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCC-CCCEEEEc--cccccCccccceeeecHH-H-HHHHhccc
Confidence 88999999999999999999877644332222222344 68999975 9987664 5777777644 2 22332111
Q ss_pred ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecC
Q 037144 329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFP 404 (502)
Q Consensus 329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~ 404 (502)
.... .+ ....|. .+.+..+.+..++++.+-++ ++.++..++.++|.+.|++ .|.+.-+ .
T Consensus 316 ~~~~-----------~~-~h~~T~-~gnpl~~Aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v-r 378 (461)
T PRK07482 316 DEHG-----------AI-GHGWTY-SGHPICAAAALANLDILERE---NLVGNAAEVGAYFRARLRAAFGDHPLVGEV-R 378 (461)
T ss_pred ccCC-----------cc-ccCCCC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEE-e
Confidence 0000 00 000011 11122223334445444333 3455666777777777754 3322111 1
Q ss_pred CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCc
Q 037144 405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTM 484 (502)
Q Consensus 405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~ 484 (502)
-...++.+.+....... ...........++.+.+.++|.+. .... +...+|+... ...+
T Consensus 379 G~Glm~giel~~~~~~~-----------------~~~~~~~~~~~~i~~~~~~~Gvl~-~~~~--~~~~i~~~Pp-l~it 437 (461)
T PRK07482 379 GVGMLAAVEFVADRDDR-----------------TPFDPALKIGPQVSAAALERGVIA-RAMP--HGDILGFAPP-LVLT 437 (461)
T ss_pred eceeEEEEEeccCCCcC-----------------CCCChhhHHHHHHHHHHHHCCcEE-ecCC--CCCEEEEeCC-CCCC
Confidence 11223344443211000 000000123467888888889653 2211 1257888753 4567
Q ss_pred HHHHHHHHHHHHHHHHh
Q 037144 485 ESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 485 ~~di~~~~~~l~~~~~~ 501 (502)
++||+++++.+.+..++
T Consensus 438 ~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 438 RAEADEIVAIAKDAVDE 454 (461)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88999999999887653
No 349
>PRK06149 hypothetical protein; Provisional
Probab=99.29 E-value=7.4e-09 Score=117.20 Aligned_cols=319 Identities=8% Similarity=-0.012 Sum_probs=175.3
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G 196 (502)
...++.+.|++++.-+. ...+|++|||+||..|+..||... | ++.+|......|-...-+..+.+
T Consensus 625 ~~~elae~L~~~~p~~~-------~~v~f~~SGsEA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~ga~~~s~ 689 (972)
T PRK06149 625 AVAEFSERLAALAPDGL-------DTVFLVNSGSEANDLAIRLAWAAS----G----RRDVVSVLEAYHGWTVATDAVST 689 (972)
T ss_pred HHHHHHHHHHHhCCCCc-------CEEEEeCCchHHHHHHHHHHHHhc----C----CCeEEEEeCCCCCcChhHhhhcC
Confidence 44456666777762111 157999999999999999998752 1 23445555555632222211111
Q ss_pred ----------CCCCCEEEEecCCC--CCcc-cC-----HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhH
Q 037144 197 ----------IDRKNIRAIKTTKS--SSYG-LS-----AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKP 254 (502)
Q Consensus 197 ----------lg~~~v~~v~~~~~--~~~~-~d-----~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~e 254 (502)
.....+..++.... ..+. .+ .+++++.++.....+..+.+|++.......|.+-| +++
T Consensus 690 ~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~ 769 (972)
T PRK06149 690 SIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQ 769 (972)
T ss_pred CccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHH
Confidence 00112344433210 0111 12 35666666554444455667777666666788888 999
Q ss_pred HHHHHHHhCCEEEeecccccccccCccc-hhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccC
Q 037144 255 LCDVAKQFGIWVHVDAAYAGSACICPEF-RHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKN 333 (502)
Q Consensus 255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~-~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~ 333 (502)
|.++|++||+.+++|.++.|+......+ ..-..|+ ..|.+|+ .|.++..+..|.+++++. . .+.+... .++.+
T Consensus 770 l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv-~PDivt~--gK~lg~G~Pl~av~~~~~-i-~~~~~~~-~~~~s 843 (972)
T PRK06149 770 VYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGV-VPDIITM--AKGMGNGHPLGAVITRRE-I-AEALEAE-GYFFS 843 (972)
T ss_pred HHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCC-CCCEEEe--cccccCCeeeEEEEEcHH-H-HhhhccC-CcccC
Confidence 9999999999999999996653322211 1111244 5898877 499886677888888654 2 2333221 12211
Q ss_pred ccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeE
Q 037144 334 EATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFPRNFSL 409 (502)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~~~~~~ 409 (502)
. . ++.+..+....+++..+-.+ ++.++..++.++|+++|+++ |-+..+. -...+
T Consensus 844 T-----------------~-~gnP~~~aaala~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vr-G~Gl~ 901 (972)
T PRK06149 844 S-----------------T-GGSPVSCRIGMAVLDVLREE---KLQENARRVGDHLKARLEALADRHPLIGAVH-GMGLY 901 (972)
T ss_pred C-----------------C-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe-ecceE
Confidence 0 0 12122223333444444333 45666777777887777653 2221111 11223
Q ss_pred EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144 410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR 489 (502)
Q Consensus 410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~ 489 (502)
+.+.+..... ..+...+....+.+++.++|.++ .+.. ....+||+... ...++++||
T Consensus 902 ~gvel~~~~~--------------------~~~~~~~~~~~i~~~l~~~Gvl~-~~~g-~~~~vl~~~Pp-l~it~~~id 958 (972)
T PRK06149 902 LGVELVRDRQ--------------------TLEPATEETAAICDRLLELGVIM-QPTG-DHLNILKIKPP-LCLDRESAD 958 (972)
T ss_pred EEEEEecCcc--------------------cCCCChHHHHHHHHHHHhCCeEE-eecC-CCCCEEEEECC-CcCCHHHHH
Confidence 3444432100 00000223467788888889654 3321 11357888753 346778999
Q ss_pred HHHHHHHHHHHh
Q 037144 490 AAWTVVQEHLEA 501 (502)
Q Consensus 490 ~~~~~l~~~~~~ 501 (502)
.++++|.+++.+
T Consensus 959 ~~~~~l~~~l~~ 970 (972)
T PRK06149 959 FFVDMLDRVLTE 970 (972)
T ss_pred HHHHHHHHHHHh
Confidence 999999988754
No 350
>PRK07480 putative aminotransferase; Validated
Probab=99.29 E-value=9.4e-09 Score=106.88 Aligned_cols=327 Identities=11% Similarity=0.010 Sum_probs=166.8
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCe-EEEeCCCCchhHHHHHHH
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKL-VVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~aa~~ 194 (502)
..+.++.+.|.+++.-+. ...+|++|||+|+..|+..||.....+ |.. ++. +|......|-...-+...
T Consensus 94 ~~~~~lae~L~~~~p~~~-------~~v~f~~SGseA~e~AlklAr~~~~~~-g~~--~r~~ii~~~~~yHG~tl~a~s~ 163 (456)
T PRK07480 94 PPAIELAAKLAEVAPPGF-------NHVFFTNSGSEANDTVLRMVRHYWALK-GKP--QKKVIISRKNGYHGSTVAGASL 163 (456)
T ss_pred HHHHHHHHHHHHhCCCCc-------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCC--CCcEEEEECCCcCCcchhhhhc
Confidence 445556777778764221 157999999999999999998753221 111 233 333344445433222222
Q ss_pred cCC-------C--CCCEEEEecCCC--CCcccC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144 195 VGI-------D--RKNIRAIKTTKS--SSYGLS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---- 251 (502)
Q Consensus 195 ~Gl-------g--~~~v~~v~~~~~--~~~~~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---- 251 (502)
.|. | ...+..++.... .....+ ++.|++.+.+. .+..+.+|++.......|.+-|
T Consensus 164 ~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~vAAvi~EPiqg~gG~~~~~~~y 241 (456)
T PRK07480 164 GGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL--GADNVAAFIGEPIQGAGGVIIPPATY 241 (456)
T ss_pred cCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHH
Confidence 221 0 112333332110 000011 25555555331 1234556666655555677766
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCccc
Q 037144 252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQY 330 (502)
Q Consensus 252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~y 330 (502)
+++|.++|++||+.+++|.++.|+.-...-+.....++ ..|.++++ |.++..+ +.|.++.++. . .+.+......
T Consensus 242 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~~Pi~av~~~~~-i-~~~~~~~~~~ 316 (456)
T PRK07480 242 WPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPDLMTIA--KGLTSGYIPMGAVGVGDR-V-AEVLIEEGGE 316 (456)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCCeeeee--hhhccCCccceEEEEcHH-H-HHHHhcCCCC
Confidence 99999999999999999999876533222111111244 57888774 9887653 5777777544 2 2333111111
Q ss_pred ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHH-HHHHHHHHHHHhcCCCeEEecCC--Ce
Q 037144 331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSH-VGMAKLFERLVTSDKRFEVAFPR--NF 407 (502)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~-~~la~~l~~~l~~~~~~~l~~~~--~~ 407 (502)
+.... |. .+.+..+.+..++|+.+-.++ +.++. .++.++|.+.|+++....++... ..
T Consensus 317 ~~~~~---------------T~-~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~G 377 (456)
T PRK07480 317 FNHGF---------------TY-SGHPVAAAVALANLRILRDEG---IVERVRDDTGPYLQKRLRELADHPLVGEVRGVG 377 (456)
T ss_pred cccCC---------------CC-CcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeec
Confidence 11000 11 111222334444555543333 44555 36666776666553222222111 12
Q ss_pred eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144 408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH 487 (502)
Q Consensus 408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d 487 (502)
.++.+.+...... . ............+.+.+.++|.+. .+ .+ ..+|++.. ...+++|
T Consensus 378 lm~gie~~~~~~~-----------~------~~~~~~~~~~~~~~~~~~~~Gll~-~~---~~-~~l~~~Pp-l~it~~e 434 (456)
T PRK07480 378 LVGAIELVKDKAT-----------R------ERFEAGGGVGTICRDHCFANGLIM-RA---VG-DRMIISPP-LVITHAE 434 (456)
T ss_pred ceEEEEEeccccc-----------c------ccCcchhhHHHHHHHHHHHCCcEE-ee---cC-CEEEEECC-CCCCHHH
Confidence 2334444221100 0 000000123356777888889754 22 12 46888753 4457889
Q ss_pred HHHHHHHHHHHHHh
Q 037144 488 VRAAWTVVQEHLEA 501 (502)
Q Consensus 488 i~~~~~~l~~~~~~ 501 (502)
||++++.|.++.++
T Consensus 435 id~~~~~l~~al~~ 448 (456)
T PRK07480 435 IDELVEKARKALDA 448 (456)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887653
No 351
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.29 E-value=1.2e-08 Score=105.94 Aligned_cols=326 Identities=11% Similarity=0.031 Sum_probs=170.4
Q ss_pred HHHHHHHHHHHHHhcCCCC-ccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPK-SFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ 193 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~-~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~ 193 (502)
++...++.+.|.+++.-.. .. ...++++|||+|+..|++.||... + +..+|......|-...-+..
T Consensus 81 ~~~~~~lae~L~~~~p~~~~~~-----~~~f~~~sGsEA~e~AlklAr~~t----g----r~~Ii~~~~~yHG~t~~~~s 147 (442)
T TIGR00709 81 TPLKDAFIEALLNIIPKRKMDY-----KLQFPGPSGADAVEAAIKLAKTYT----G----RTNVISFSGGFHGMTIGALA 147 (442)
T ss_pred cHHHHHHHHHHHHhCCCcCCCc-----cEEEeCCCHHHHHHHHHHHHHHhc----C----CCeEEEEcCCcCCchHHHHh
Confidence 3455567778888874321 11 024556899999999999999752 1 22344445555654444444
Q ss_pred HcCC---------CCCCEEEEecCCCCCccc--------CHHH----HHHHHHHHHhcCCccEEEEEecCCcccccc---
Q 037144 194 IVGI---------DRKNIRAIKTTKSSSYGL--------SAES----VLSQINLDVEAELIPLFLCATVGTTAITAV--- 249 (502)
Q Consensus 194 ~~Gl---------g~~~v~~v~~~~~~~~~~--------d~~~----Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i--- 249 (502)
+.|. ....+..+|... ..+. +.+. +++.+.........+.+|++.......|.+
T Consensus 148 ~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~ 225 (442)
T TIGR00709 148 VTGNLFAKNAVGMLMPGVQFMPYPH--EYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAP 225 (442)
T ss_pred hcCChhhhccCCCCCCCcEEeCCCc--cccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCC
Confidence 4331 011244444321 1111 2223 333332111111234556665555555655
Q ss_pred -CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCc
Q 037144 250 -DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNP 328 (502)
Q Consensus 250 -dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~ 328 (502)
+-+++|.++|++||++++.|..+.|+.....-+.....++ ..|.+++ .|.++..+..|.++.++. . +.+. .
T Consensus 226 ~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~~G~Pigav~~~~~--~-~~~~--~ 297 (442)
T TIGR00709 226 SEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGI-EPDFVVM--SKAVGGGLPLAVLLIAPE--F-DAWQ--P 297 (442)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCC-CCcEEEE--cccccCCcccEEEEEchH--H-hccC--C
Confidence 2389999999999999999999987644322111111233 5788885 599877778899888654 2 2221 1
Q ss_pred ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCC--
Q 037144 329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFPR-- 405 (502)
Q Consensus 329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~~-- 405 (502)
..... |+ .+.+....+..++++.+..+ .+.++..++.++|.+.|+++ ....++...
T Consensus 298 ~~~~~-----------------T~-~gnpla~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG 356 (442)
T TIGR00709 298 AGHTG-----------------TF-RGNQLAMVTGTEALNYWKDD---NLAQNAQERGERITSFLDDMIKEHPCIGNVRG 356 (442)
T ss_pred CcCCC-----------------CC-CcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeec
Confidence 11100 10 11122223333444444333 45567777788888877653 122222221
Q ss_pred CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcH
Q 037144 406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTME 485 (502)
Q Consensus 406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~ 485 (502)
...++.+.+...... ++ . ......+ ......+...+.++|.++ .+... ...++|+... ...++
T Consensus 357 ~Gl~~~ie~~~~~~~-------~~--~----~~~~~~~-~~~~~~~~~~~~~~Gvl~-~~~~~-~~~~l~~~Pp-l~it~ 419 (442)
T TIGR00709 357 RGLMQGIMIVDERQS-------KD--A----TGAYPRD-CELAAAIQGACFENGLLL-ETGGR-EGEVFRLLCP-ITIDQ 419 (442)
T ss_pred cceEEEEEEccCccc-------cc--c----cccCCcc-hHHHHHHHHHHHHCCeEE-eecCC-CCCEEEEECC-CCCCH
Confidence 223444544321100 00 0 0000000 123456777788888643 32211 2357898864 55677
Q ss_pred HHHHHHHHHHHHHHHh
Q 037144 486 SHVRAAWTVVQEHLEA 501 (502)
Q Consensus 486 ~di~~~~~~l~~~~~~ 501 (502)
++|+++++++.+..++
T Consensus 420 ~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 420 EECEEGISRFKQAVEE 435 (442)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8999999999887653
No 352
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.28 E-value=4.2e-09 Score=108.48 Aligned_cols=315 Identities=10% Similarity=-0.009 Sum_probs=168.1
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+...++.+.|.++++-+.+ ..+|+++||+|+..|+..||.....+ +. + +.-+|......|-...-+..+.
T Consensus 86 ~~~~~la~~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~~~~~-g~-~-r~kii~~~~~yHG~t~~a~s~~ 155 (428)
T PRK07986 86 PPAIELCRKLVAMTPQPLE-------CVFLADSGSVAVEVAMKMALQYWQAK-GE-P-RQRFLTLRHGYHGDTFGAMSVC 155 (428)
T ss_pred HHHHHHHHHHHhhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CC-C-CcEEEEECCCcCCCcHhhhccc
Confidence 3455677778887642211 57999999999999999998753211 11 1 2224444444554332222222
Q ss_pred CCC----------CCCEEEEecCCCC---Cc-ccCHHHHHHHHHHHHhcCCccEEEEEecC-Ccccccc----CChhHHH
Q 037144 196 GID----------RKNIRAIKTTKSS---SY-GLSAESVLSQINLDVEAELIPLFLCATVG-TTAITAV----DPLKPLC 256 (502)
Q Consensus 196 Glg----------~~~v~~v~~~~~~---~~-~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g-tt~~G~i----dpl~eI~ 256 (502)
|-. ...+..+|..... .+ .-|++++++.++.. +....+|++... ....|.+ +.+++|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~---~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~ 232 (428)
T PRK07986 156 DPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAH---RHEIAAVILEPIVQGAGGMRIYHPEWLKRVR 232 (428)
T ss_pred CCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhC---CCcEEEEEEechhcCcCCcccCCHHHHHHHH
Confidence 210 0123344432100 00 23667888888532 223445555432 3334443 3499999
Q ss_pred HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCc-ccccCc
Q 037144 257 DVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNP-QYLKNE 334 (502)
Q Consensus 257 ~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~-~yl~~~ 334 (502)
++|++||+++++|.++.|+.....-+.....++ ..|.+++ .|.++.. ..+|.++.++. +.+.+.... ..+...
T Consensus 233 ~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~--i~~~~~~~~~~~~~~~ 307 (428)
T PRK07986 233 KLCDREGILLIADEIATGFGRTGKLFACEHAGI-APDILCL--GKALTGGTMTLSATLTTRE--VAETISNGEAGCFMHG 307 (428)
T ss_pred HHHHHcCCEEEEeccccCCccCCCeeeecccCC-CCCEEEe--chhhhCCcccCcchhchHH--HHHHhhcCCCCccccC
Confidence 999999999999999866422211111111233 4688875 6888655 35677666543 223332111 000000
Q ss_pred cCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CeeEEEE
Q 037144 335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR--NFSLVCF 412 (502)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~--~~~~v~f 412 (502)
.|.. +.+..+.+..++++.+-.+ ++.++..++.++|++.|+++.....+... ...++.+
T Consensus 308 ---------------~T~~-g~p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~v 368 (428)
T PRK07986 308 ---------------PTFM-GNPLACAVANASLSLLESG---DWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVV 368 (428)
T ss_pred ---------------CCCC-cCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEE
Confidence 0111 2122333444555555333 35677788888888888764222222111 1223333
Q ss_pred EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHH
Q 037144 413 RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAW 492 (502)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~ 492 (502)
.+..+. ....+.+.+.++|.++ .+. | .++|++.. ...++++|++++
T Consensus 369 e~~~~~----------------------------~~~~~~~~l~~~Gl~~-~~~---g-~~i~~~Pp-l~it~~ei~~~~ 414 (428)
T PRK07986 369 ETTRPV----------------------------NMAALQRFFVEQGVWI-RPF---G-KLIYLMPP-YIILPEQLQRLT 414 (428)
T ss_pred EeCCcc----------------------------cHHHHHHHHHHCCcEE-Eec---C-CEEEEeCC-CCCCHHHHHHHH
Confidence 332210 1346777888889754 221 2 47999753 457788999999
Q ss_pred HHHHHHHHh
Q 037144 493 TVVQEHLEA 501 (502)
Q Consensus 493 ~~l~~~~~~ 501 (502)
+.|.+..++
T Consensus 415 ~~l~~~l~~ 423 (428)
T PRK07986 415 AAVNRAVQD 423 (428)
T ss_pred HHHHHHHhh
Confidence 999887653
No 353
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.27 E-value=1.7e-08 Score=104.98 Aligned_cols=315 Identities=14% Similarity=0.054 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
++.+.++.+.|+++++...+ ..+|++|||+|+..|+..||... + +..+|......|-...-+..+
T Consensus 112 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~t----g----r~~ii~~~~~yHG~t~~a~s~ 176 (459)
T PRK06082 112 NETAIECAEKLTEIAGGELN-------RVLFAPGGTSAIGMALKLARHIT----G----NFKVVSLWDSFHGASLDAISV 176 (459)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEECCCcHHHHHHHHHHHHHhc----C----CCEEEEEeCCCcCccHHHHhh
Confidence 45566677778888753212 57999999999999999998651 1 223444455556554444433
Q ss_pred cCCC---------CCCEEEEecCCCCC--c-cc------CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hh
Q 037144 195 VGID---------RKNIRAIKTTKSSS--Y-GL------SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LK 253 (502)
Q Consensus 195 ~Glg---------~~~v~~v~~~~~~~--~-~~------d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~ 253 (502)
.|-. ...+..+|....-. + .. +++.|++.++. .+ ...+|++.......+.+-| ++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~---~~-~vAavIvEPv~g~g~~~~~~~yl~ 252 (459)
T PRK06082 177 GGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK---EG-GIGAFIAEAVRNTDVQVPSKAYWK 252 (459)
T ss_pred cCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc---CC-CEEEEEECCccCCCCcCCCHHHHH
Confidence 3320 01234444221000 0 01 13557776653 12 3455666543333233444 99
Q ss_pred HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCccccc
Q 037144 254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQYLK 332 (502)
Q Consensus 254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~yl~ 332 (502)
+|.++|++||+.+++|.++.|+.....-+.....++ ..|.+++ .|.++..+ ..|.++.++.- ...+.. .+..
T Consensus 253 ~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PDiv~~--gKgl~gG~~P~~av~~~~~i--~~~~~~--~~~~ 325 (459)
T PRK06082 253 RVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPDILCI--GKGLGGGLVPIAAMITKDKY--NTAAQI--SLGH 325 (459)
T ss_pred HHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCCEEEe--cccccCCCCcceEEEEcHHH--HhhccC--CCCC
Confidence 999999999999999999887533221111111244 5888885 69987663 67888776542 122210 0000
Q ss_pred CccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecC--CCeeE
Q 037144 333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAFP--RNFSL 409 (502)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~~--~~~~~ 409 (502)
.|. .+.+..+.+..++++.+..+ +++++..++.++|++.|+++. ...++.. -...+
T Consensus 326 -----------------~T~-~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~ 384 (459)
T PRK06082 326 -----------------YTH-EKSPLGCAAALATIEVIEQE---GLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLL 384 (459)
T ss_pred -----------------CCC-CcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccce
Confidence 011 11111223333444444332 466777888888888886641 1212211 11224
Q ss_pred EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144 410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR 489 (502)
Q Consensus 410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~ 489 (502)
+.+.+...... . ....+....+...+.++|.++... +..++|++.. ...+++||+
T Consensus 385 ~~ve~~~~~~~-------------------~-~~~~~~~~~~~~~~~~~Gvl~~~~----~~~~i~~~Pp-l~it~~eid 439 (459)
T PRK06082 385 WGVELVTDRHT-------------------K-ERAYDEAEAVLYRCLNNGLSFKVS----QGNVIQLSPP-LIITREELT 439 (459)
T ss_pred eEEEEccCccc-------------------c-CccHHHHHHHHHHHHhCCCEEEec----CCCEEEEeCC-CccCHHHHH
Confidence 44444321000 0 000123456777888889754321 2357898853 335778999
Q ss_pred HHHHHHHHHHHh
Q 037144 490 AAWTVVQEHLEA 501 (502)
Q Consensus 490 ~~~~~l~~~~~~ 501 (502)
++++++.+...+
T Consensus 440 ~~~~~l~~~l~~ 451 (459)
T PRK06082 440 QALAILEEAIAK 451 (459)
T ss_pred HHHHHHHHHHHH
Confidence 999999887653
No 354
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.27 E-value=8.2e-09 Score=103.98 Aligned_cols=277 Identities=12% Similarity=0.041 Sum_probs=152.6
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHHHcC--
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQIVG-- 196 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~~~G-- 196 (502)
++.+.++++.|.+ ..+++++||+|+..|+..+|... ++..|++ +...|-...-+....|
T Consensus 70 ~la~~l~~~~~~~---------~v~~~~SGseA~e~Alklar~~~---------gr~~Ii~~~~syHG~t~~~ls~~~~~ 131 (364)
T PRK04013 70 EMLEELSKWVNYE---------YVYMGNSGTEAVEAALKFARLYT---------GRKEIIAMTNAFHGRTMGALSATWKP 131 (364)
T ss_pred HHHHHHHhhcCCC---------EEEEeCchHHHHHHHHHHHHHHh---------CCCEEEEECCccccCchhhccCCCCc
Confidence 3445556666543 47999999999999999998752 2334444 4444543322322211
Q ss_pred -----CC--CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC-C---hhHHHHHHHHhCCE
Q 037144 197 -----ID--RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD-P---LKPLCDVAKQFGIW 265 (502)
Q Consensus 197 -----lg--~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id-p---l~eI~~i~~~~g~~ 265 (502)
.+ ...+..+|. -|++.+++.+.+. +.+|++.......|.+- | +++|.++|++||+.
T Consensus 132 ~~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~~------~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gil 198 (364)
T PRK04013 132 KYREDFEPLVPGFKHIPF-------NDVEAAKEAITKE------TAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGAL 198 (364)
T ss_pred ccccCCCCCCCCcEEecC-------CCHHHHHHHhcCC------cEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 10 012223332 1678888888532 34666665444445543 4 99999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV 345 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (502)
++.|.++.|. -...-+.....++ ..|.+++ -|.++..+..|.++.++.- . ......
T Consensus 199 lI~DEv~tG~-RtG~~~a~~~~gv-~PDiv~~--gK~lggG~P~~a~~~~~~~--~------~~~~~~------------ 254 (364)
T PRK04013 199 LIADEVQSGL-RTGKFLAIEHYKV-EPDIVTM--GKGIGNGVPVSLTLTNFDV--E------RGKHGS------------ 254 (364)
T ss_pred EEEechhhcC-CCCchhHHHhcCC-CCCEEEe--cccccCCceeEEEEecccc--c------CCCcCC------------
Confidence 9999998765 3222111111233 5788887 4888766778887765431 0 000000
Q ss_pred CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhh
Q 037144 346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRT 425 (502)
Q Consensus 346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~ 425 (502)
|+ .+.+..+.+..++++.+-++++.+.+++. + ..+.. |.+.-+ .-..-++.+.+..+
T Consensus 255 -----T~-~gnp~~~aaa~a~l~~i~~~~l~~~~~~~------l-~~l~~-~~v~~v-RG~Gl~~gve~~~~-------- 311 (364)
T PRK04013 255 -----TF-GGNPLACKAVAVTLRILRRERLVEKAGEK------F-IEIKG-ERVVTT-RGRGLMIGIVLKKP-------- 311 (364)
T ss_pred -----CC-CcCHHHHHHHHHHHHHHHhccHHHHHHHH------H-HHhcc-Ccceee-eeCcEEEEEEeCCc--------
Confidence 00 11122333444555555555544443321 2 12221 211101 01122334433211
Q ss_pred cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
...+.+.+.++|.+. .+ .+..++|+... ...++++++.+++.|+++.++
T Consensus 312 ----------------------~~~i~~~~~~~Gll~-~~---~g~~vlr~~Pp-l~it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 312 ----------------------VGKYVEELQNRGYLV-HT---AGQRVIRLLPP-LIISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred ----------------------HHHHHHHHHhCCcEE-ee---CCCCEEEEeCC-cccCHHHHHHHHHHHHHHHHH
Confidence 235677777788653 22 23468999863 457788999999999988764
No 355
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.26 E-value=1.6e-08 Score=105.43 Aligned_cols=327 Identities=10% Similarity=0.030 Sum_probs=174.9
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
++...++.+.|++++.-+. ...+|+++||+|+..|+..||.....+ +..+ +..+|......|-...-+..+
T Consensus 89 ~~~~~~lae~L~~~~p~~~-------~~v~f~~sGsEAve~AlKlAr~~~~~~-g~t~-r~~ii~~~~~yHG~t~ga~s~ 159 (466)
T PRK07030 89 HEPVIELSERLVKITPPGL-------SRCFYADNGSSAIEVALKMSFHYWRNR-GKPR-KKRFVTLTNSYHGETLAAMSV 159 (466)
T ss_pred CHHHHHHHHHHHHhCCCCc-------CEEEEeCCcHHHHHHHHHHHHHHHHHh-CCCC-CcEEEEECCCcCcccHHHHhc
Confidence 3455567777888763211 258999999999999999998763222 1111 223444454456443333333
Q ss_pred cCCC---------CCCEEEEecCCCC--Cc--------ccCHHHHHHHHHHHHhcCCccEEEEEec-CCccccccCC---
Q 037144 195 VGID---------RKNIRAIKTTKSS--SY--------GLSAESVLSQINLDVEAELIPLFLCATV-GTTAITAVDP--- 251 (502)
Q Consensus 195 ~Glg---------~~~v~~v~~~~~~--~~--------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt~~G~idp--- 251 (502)
.|.. ...+..+|..... .. .-+++.+++.+.. .+..+.+|++.- .....|.+-|
T Consensus 160 ~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~---~~~~iAAvi~EP~iqg~gG~~~~~~~ 236 (466)
T PRK07030 160 GDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAE---HHDEIAAVIVEPLIQGAGGMRMYHPV 236 (466)
T ss_pred cCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEecccccCCCcccCCHH
Confidence 3321 0123344432100 00 0134566777752 223455666654 2444566533
Q ss_pred -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCc-
Q 037144 252 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNP- 328 (502)
Q Consensus 252 -l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~- 328 (502)
+++|.++|++||+.+++|..+.|+.....-+.....++ ..|.++++ |.++..+ ..|.++.++.- .+.+....
T Consensus 237 yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv-~PDiv~~g--Kgl~gG~~Pi~av~~~~ei--~~~~~~~~~ 311 (466)
T PRK07030 237 YLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGI-RPDFLCLS--KALTGGYLPLAAVLTTDTV--YQAFYDDYP 311 (466)
T ss_pred HHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCC-CCCEEeee--hhccCCcccceEEEecHHH--HHHHhcccc
Confidence 88999999999999999999877643322222112244 58999985 8887664 67888776442 22332110
Q ss_pred ---ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-
Q 037144 329 ---QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP- 404 (502)
Q Consensus 329 ---~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~- 404 (502)
.+... . |. .+.+....+..++++.+-++ +++++..++.++|++.|+++.....+..
T Consensus 312 ~~~~~~h~-~---------------T~-~gnpla~aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~~v 371 (466)
T PRK07030 312 TLRAFLHS-H---------------SY-TGNPLACAAALATLDIFEQD---NVIENNRALARRMAEATAHLADHPHVAEV 371 (466)
T ss_pred cccccccC-C---------------CC-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 01100 0 10 11122223333444444333 4567778888888888876422211211
Q ss_pred -CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCC
Q 037144 405 -RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMT 483 (502)
Q Consensus 405 -~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t 483 (502)
-...++.+.+....... . .. . .. .....++.+++.++|.+. .+. + ..+|+... ...
T Consensus 372 rG~Gl~~gie~~~~~~~~------------~-~~--~-~~-~~~~~~i~~~~~~~Gvl~-~~~---g-~~i~~~Pp-l~i 428 (466)
T PRK07030 372 RQTGMILAIEMVQDKASK------------T-PY--P-WQ-ERRGLKVYQHALERGALL-RPL---G-SVVYFLPP-YVI 428 (466)
T ss_pred EeceeEEEEEeccCcccc------------c-cC--c-ch-hHHHHHHHHHHHHCCeEE-Eec---C-CEEEEECC-ccC
Confidence 11223444443211000 0 00 0 00 122356778888889644 321 2 36888753 456
Q ss_pred cHHHHHHHHHHHHHHHHh
Q 037144 484 MESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 484 ~~~di~~~~~~l~~~~~~ 501 (502)
+++||+.+++.+.+.+++
T Consensus 429 t~~eid~~~~~l~~al~~ 446 (466)
T PRK07030 429 TPEQIDFLAEVASEGIDI 446 (466)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 788999999999988764
No 356
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.26 E-value=1e-08 Score=106.02 Aligned_cols=289 Identities=11% Similarity=0.043 Sum_probs=155.2
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHH-hC-------c----------cCCCC-eEEEeCCCCchhHHHHHHHcCCCC---
Q 037144 142 GGVIQGTTCEALLCTLTAARDRVLKK-IG-------R----------ENISK-LVVYSSDQTHCAFQKAAQIVGIDR--- 199 (502)
Q Consensus 142 ~g~~t~ggt~a~~~al~~a~~~~~~~-~~-------~----------~~~~~-~~v~~s~~~H~s~~~aa~~~Glg~--- 199 (502)
..+|++|||+||..|+..||...... .+ . .|.++ .+|......|-...-+....|-..
T Consensus 124 ~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~ 203 (464)
T TIGR00699 124 QVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHK 203 (464)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccc
Confidence 57999999999999999998753211 00 0 01112 344445555655444444433210
Q ss_pred -----CCEEEEecCCC-CCc-----------ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHH
Q 037144 200 -----KNIRAIKTTKS-SSY-----------GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDV 258 (502)
Q Consensus 200 -----~~v~~v~~~~~-~~~-----------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i 258 (502)
..+..+|.... ..+ .-+++.|++++++. +..+.+|++.......|.+-| +++|.++
T Consensus 204 ~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~---~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~l 280 (464)
T TIGR00699 204 LDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKW---HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDI 280 (464)
T ss_pred cCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHH
Confidence 01222332210 000 01356677777532 223567777766666788877 9999999
Q ss_pred HHHhCCEEEeecccccccccCccchhhhcCCC-CCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccC
Q 037144 259 AKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-CVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEAT 336 (502)
Q Consensus 259 ~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~ 336 (502)
|++||+.+++|.++.|+.....-+..-..++. ..|.++++ |.++. .|+++.+ . .+.. .+.+..+.
T Consensus 281 c~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~g--K~lg~---gG~~~~~-~-----~~~~~~~~~~~~T-- 347 (464)
T TIGR00699 281 TKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFS--KKFQT---AGYFFHD-P-----AFRPNKPYRQFNT-- 347 (464)
T ss_pred HHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEeh--hhhcc---CCccccc-h-----hccCCCCcccccC--
Confidence 99999999999998765332221121122443 58988874 88741 1222221 1 1111 01111100
Q ss_pred CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEe-cCCCeeEE
Q 037144 337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKR-FEVA-FPRNFSLV 410 (502)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~-~~l~-~~~~~~~v 410 (502)
. .+.+..+....++++.+-.+ ++.++..++.++|.+.|++ .|. +.-+ ......++
T Consensus 348 ---------------~-~gnp~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~ 408 (464)
T TIGR00699 348 ---------------W-MGDPSRALILREIIQEIKRK---DLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFI 408 (464)
T ss_pred ---------------C-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEE
Confidence 0 11111222333344444333 3555666666777777755 331 2112 11234455
Q ss_pred EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHH
Q 037144 411 CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRA 490 (502)
Q Consensus 411 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~ 490 (502)
.+.+.. ......+.+.+.++|.+. ... +...||++.. ...+++||+.
T Consensus 409 gie~~~----------------------------~~~~~~i~~~~~~~Gvl~-~~~---g~~~ir~~Pp-l~it~~eid~ 455 (464)
T TIGR00699 409 AWDTPD----------------------------EAKRDKLLKKARNNGVNI-GGC---GVKAIRLRPM-LVFQKHHADI 455 (464)
T ss_pred EEecCC----------------------------HHHHHHHHHHHHHCCcEE-ecC---CCCeEEEeCC-CCCCHHHHHH
Confidence 555421 122457788888889754 221 4468999874 5567789999
Q ss_pred HHHHHHHH
Q 037144 491 AWTVVQEH 498 (502)
Q Consensus 491 ~~~~l~~~ 498 (502)
++++|.++
T Consensus 456 ~~~~l~~~ 463 (464)
T TIGR00699 456 FLEIISKI 463 (464)
T ss_pred HHHHHHHh
Confidence 99999875
No 357
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.25 E-value=1.2e-08 Score=106.24 Aligned_cols=328 Identities=11% Similarity=0.036 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEc-CCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQ-GTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t-~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
+.+.++.+.|.+++.-+-. .....+|+ ++||+|+..|++.||... + +..+|......|-...-+..+
T Consensus 106 ~~~~~la~~L~~~~p~~~~----~~~~v~f~~~SGSEAve~AlklAr~~t----g----r~~ii~~~~~yHG~t~~als~ 173 (464)
T PRK06938 106 PVKDQFVQDLFASLPEAFA----REAKIQFCGPTGTDAVEAALKLVKTAT----G----RSTVLSFQGGYHGMSQGALSL 173 (464)
T ss_pred HHHHHHHHHHHHhCccccc----ccceEEEeCCCcHHHHHHHHHHHHHhh----C----CCeEEEECCccCCccHHHHhh
Confidence 3444455666666531100 00124454 799999999999998651 1 223444444455443333333
Q ss_pred cCC-------C--CCCEEEEecCCCCCc----------ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144 195 VGI-------D--RKNIRAIKTTKSSSY----------GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---- 251 (502)
Q Consensus 195 ~Gl-------g--~~~v~~v~~~~~~~~----------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---- 251 (502)
.|- + ...+..+|....... ..+.+.+++.+.+.......+.+|++.-.....|.+-|
T Consensus 174 t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~y 253 (464)
T PRK06938 174 MGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEW 253 (464)
T ss_pred cCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHH
Confidence 221 0 113455654321000 12367788888542211123556666654444566533
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccc
Q 037144 252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYL 331 (502)
Q Consensus 252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl 331 (502)
+++|.++|++||+.+++|..+.|+.....-+..-..++ ..|.++++ |.++..+..|.++.++. + +.+. +.+.
T Consensus 254 l~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~~g--KglggG~PlsAv~~~~~--~-~~~~--~~~~ 325 (464)
T PRK06938 254 LRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGI-IPDVVVLS--KAIGGSLPLAVVVYREW--L-DTWQ--PGAH 325 (464)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCC-CCCEEEee--ccccCCCceEEEeehhH--h-hccC--CCCC
Confidence 88999999999999999999877643222111111234 58999985 88876677899888644 2 2221 1111
Q ss_pred cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCC--Cee
Q 037144 332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFPR--NFS 408 (502)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~~--~~~ 408 (502)
.+ |+ .+.+....+..++++.+..+ ++.++..++.++|.+.|+++ ....++... ...
T Consensus 326 ~~-----------------T~-~gnpla~Aaa~a~L~~l~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl 384 (464)
T PRK06938 326 AG-----------------TF-RGNQMAMAAGSATLRYIKEH---RLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGL 384 (464)
T ss_pred CC-----------------CC-CcCHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccce
Confidence 10 11 11111223333444444333 45566777777777777653 112122111 122
Q ss_pred EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144 409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV 488 (502)
Q Consensus 409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di 488 (502)
++.+.+...... .+. .. ...........+.+.+.++|.++. +... ...+||+... ...+++||
T Consensus 385 m~gie~~~~~~~---------~~~----~~-~~~~~~~~~~~~~~~~~~~Gll~~-~~g~-~~~~l~~~Pp-l~it~~ei 447 (464)
T PRK06938 385 MLGVEIVDPQGE---------PDA----LG-HPPANGELASLIQRECLRRGLILE-LGGR-HGSVVRFLPP-LIITAEQI 447 (464)
T ss_pred EEEEEeccCccc---------ccc----cc-cCCccHHHHHHHHHHHHHCCeEEe-ecCC-CCCEEEEECC-CccCHHHH
Confidence 444444321100 000 00 000001334567788888896543 2211 1357998753 44677899
Q ss_pred HHHHHHHHHHHHh
Q 037144 489 RAAWTVVQEHLEA 501 (502)
Q Consensus 489 ~~~~~~l~~~~~~ 501 (502)
+++++++.++..+
T Consensus 448 d~~~~~l~~~l~~ 460 (464)
T PRK06938 448 DEVAEIFAEAVAA 460 (464)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999887654
No 358
>PRK07046 aminotransferase; Validated
Probab=99.25 E-value=9.5e-09 Score=106.68 Aligned_cols=306 Identities=13% Similarity=0.071 Sum_probs=163.9
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCe-EEEeCCCCchhHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKL-VVYSSDQTHCAFQKAAQ 193 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~aa~ 193 (502)
++.+.++.+.++++++++ ...|+++||||+..|+..||... ++. +|-.....|-.......
T Consensus 114 ~~~~~~lAe~l~~~~~~~---------~v~F~nSGtEA~e~AlrlAR~~T---------Gr~~ii~~~g~YHG~~d~~l~ 175 (453)
T PRK07046 114 SEDAAWVGEELARRFGLP---------YWQVATTATDANRFVLRWARAVT---------GRPKILVFNGCYHGTVDDVFV 175 (453)
T ss_pred CHHHHHHHHHHHHHhCCC---------EEEEECCHHHHHHHHHHHHHHhh---------CCCEEEEECCCCCCCcHHhHh
Confidence 456777888888887532 47999999999999999999752 233 33334444533211111
Q ss_pred Hc------------CCCC---CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhH
Q 037144 194 IV------------GIDR---KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKP 254 (502)
Q Consensus 194 ~~------------Glg~---~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~e 254 (502)
.. |+.. ..+..+|. -|+++|++.+.. ....+|++.......|.+-| +++
T Consensus 176 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l~~~l~~-----~~vAavi~EPi~g~~G~~~p~~~fl~~ 243 (453)
T PRK07046 176 DLVDGRPVQRPGLLGQVHDLTATTRVVEF-------NDLAALEAALAD-----GDVAAVLAEPAMTNIGMVLPEPGFHEA 243 (453)
T ss_pred hccCCCCCCCCCCCCCCccccCceEeeCC-------CCHHHHHHHhCC-----CCeEEEEECCCCCCCCCcCCCHHHHHH
Confidence 10 1100 01222221 278999988842 12456666655555566655 899
Q ss_pred HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCC-cccccC
Q 037144 255 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTN-PQYLKN 333 (502)
Q Consensus 255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~~ 333 (502)
|.++|++||+.+++|.++. +-.-.-.... .-++ ..|.+++ -|.++..+++|.+..++. . .+.+... .....
T Consensus 244 lr~lc~~~g~llI~DEV~t-fr~g~Gg~~~-~~gv-~PDi~t~--gK~lggG~Pi~av~g~~~-i-~~~~~~~~~~~~~- 315 (453)
T PRK07046 244 LRELTRRYGTLLVIDETHT-ISSGPGGYTR-AHGL-EPDFLVV--GKPIAGGVPCAVYGFSAE-L-AERAQAAKASAPP- 315 (453)
T ss_pred HHHHHHHhCCEEEEEcccc-CccCCcchhH-HhCC-Cccceee--hhhhcCCCcceeeeehHH-H-HHHHhhccccCCC-
Confidence 9999999999999999874 1000000111 1144 5788886 599887788998887644 2 2233210 00000
Q ss_pred ccCCCCCcccccCCCcccccCCCCCCchHH---HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEecCC
Q 037144 334 EATDQEPKEQEVGYKDWQITLCRRFRSLKL---WVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKR-FEVAFPR 405 (502)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~-~~l~~~~ 405 (502)
+. .....+-...++.+ .++++.+-. .+..++..++.++|++.|++ .+- +.+.+..
T Consensus 316 ---------~~-----~~~~~T~~gnpl~~aa~~a~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G 378 (453)
T PRK07046 316 ---------GH-----SGIGTTLSANALAMAAMRATLAEVMT---EAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVG 378 (453)
T ss_pred ---------CC-----ceeCCCCcccHHHHHHHHHHHHHHhc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 00 00001111123333 334444422 23455666666777666653 321 1222211
Q ss_pred CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHh--hHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCC
Q 037144 406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEER--TNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMT 483 (502)
Q Consensus 406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t 483 (502)
.++.+.+.+..... . .+... -......+...+.++|.++ .+. ...++++.. .
T Consensus 379 --~~~~i~~~~~~~~~----------~------~~~~~~~~~~~~~~~~~~~~~~Gv~~-~~~----~~~~~~~p~---~ 432 (453)
T PRK07046 379 --ARVEFQFAPTPPRN----------G------AEAAAALDPELEAALHLYLLNRGVLI-TPF----HNMMLVCPA---T 432 (453)
T ss_pred --cEEEEEEeCCCCCC----------H------HHHhcccCHHHHHHHHHHHHHCCCEE-ecc----cCcEEEeCC---C
Confidence 23444432211000 0 00000 0234567778888889754 321 135677642 4
Q ss_pred cHHHHHHHHHHHHHHHHh
Q 037144 484 MESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 484 ~~~di~~~~~~l~~~~~~ 501 (502)
+++|||++++++.+..++
T Consensus 433 t~~did~~~~~~~~~l~~ 450 (453)
T PRK07046 433 TAADVDRLVAAFDACLGE 450 (453)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 677999999999988764
No 359
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.25 E-value=1e-08 Score=105.95 Aligned_cols=312 Identities=12% Similarity=0.018 Sum_probs=168.2
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI 197 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl 197 (502)
..++.+.+.++++-+- ...+|+.+||+|+..|+..||.....+ +..+ +..+|..+...|-...-+..+.|.
T Consensus 90 ~~~la~~l~~~~~~~~-------~~v~f~~sGseA~e~AlklAr~~~~~~-~~~~-r~~il~~~~~yHG~t~~~~s~~~~ 160 (427)
T TIGR00508 90 AIELCQKLVKMTPNAL-------DCVFLADSGSVAVEVALKMALQYWQAK-GEKN-RQKFLTIRSGYHGDTFGAMSVCDP 160 (427)
T ss_pred HHHHHHHHHhhCCCCC-------CEEEEeCCcHHHHHHHHHHHHHHHHhh-CCCC-ccEEEEEcCCcCCccHhhhcccCC
Confidence 3456677788764321 258999999999999999999864321 1111 233555555566443323222221
Q ss_pred ----------CCCCEEEEecCCCCCc-----ccCHHHHHHHHHHHHhcCCccEEEEEecC-Cccccc----cCChhHHHH
Q 037144 198 ----------DRKNIRAIKTTKSSSY-----GLSAESVLSQINLDVEAELIPLFLCATVG-TTAITA----VDPLKPLCD 257 (502)
Q Consensus 198 ----------g~~~v~~v~~~~~~~~-----~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g-tt~~G~----idpl~eI~~ 257 (502)
....+..+|... ..+ .-|++++++.+.+. +....+|++... ....|. .+++++|.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~ 236 (427)
T TIGR00508 161 ENSMHSLYKGYLPEQIFAPAPQ-NRFDEEWNEEAITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQA 236 (427)
T ss_pred cccccccccccCCCCeEcCCCC-ccccchhHHHHHHHHHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHH
Confidence 001122333211 011 12567777777532 222345555543 333332 377999999
Q ss_pred HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCC--cccccCc
Q 037144 258 VAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTN--PQYLKNE 334 (502)
Q Consensus 258 i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~--~~yl~~~ 334 (502)
+|++||+.+++|.++.|+......+.....++ ..|.+++ .|.++..+ .++.++.++. . .+.+... ..+....
T Consensus 237 lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v-~pDi~~~--gK~l~gG~~p~~a~~~~~~-~-~~~~~~~~~~~~~~~~ 311 (427)
T TIGR00508 237 LCKQYDILLIADEIATGFGRTGKLFACEHAGV-VPDILCV--GKALTGGYMTLSATVTTDK-V-AQTISSGEAGCFMHGP 311 (427)
T ss_pred HHHHcCCEEEEeccccCCCcCCccchhhhcCC-CCCEEEe--chhhhcCcccceEEEEcHH-H-HHHHhcCCCCccccCC
Confidence 99999999999999865422211111111233 5787775 69886553 4666666533 2 2333211 1111110
Q ss_pred cCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEEE
Q 037144 335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP--RNFSLVCF 412 (502)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~~~~~v~f 412 (502)
|. .+.+.......++++.+..+ +..++..++.++|++.|+++.....+.. -...++.+
T Consensus 312 ----------------T~-~g~p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i 371 (427)
T TIGR00508 312 ----------------TF-MGNPLACAVAEASLAILLEG---EWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVV 371 (427)
T ss_pred ----------------CC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEE
Confidence 00 01122333444555554332 3467788888889888877532111111 11334444
Q ss_pred EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHH
Q 037144 413 RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAW 492 (502)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~ 492 (502)
.+.... ....+.+++.++|.. +.+. + ..+|++.. ...+++|||+++
T Consensus 372 ~~~~~~----------------------------~~~~~~~~l~~~Gv~-~~~~---~-~~l~~~pp-l~~t~~~id~~~ 417 (427)
T TIGR00508 372 EMYKPV----------------------------NVEELQKKFVEQGVW-IRPF---G-KLIYVMPP-YIITTEQLQKLT 417 (427)
T ss_pred EECCcc----------------------------CHHHHHHHHHHCCeE-EEec---C-CEEEEECC-CCCCHHHHHHHH
Confidence 443210 124577788888964 3332 1 36888764 345677999999
Q ss_pred HHHHHHHHh
Q 037144 493 TVVQEHLEA 501 (502)
Q Consensus 493 ~~l~~~~~~ 501 (502)
+++.+.+++
T Consensus 418 ~~l~~~l~~ 426 (427)
T TIGR00508 418 AALIEALHE 426 (427)
T ss_pred HHHHHHHhc
Confidence 999988754
No 360
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.24 E-value=1.6e-08 Score=104.84 Aligned_cols=311 Identities=10% Similarity=0.054 Sum_probs=161.0
Q ss_pred HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCC----CCeEEEeCCCCchhHHHHHHH
Q 037144 119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENI----SKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~----~~~~v~~s~~~H~s~~~aa~~ 194 (502)
.++.+.|.++.+ |... ...+|++|||||+..|++.||.....+....+. +..+|......|-...-+...
T Consensus 95 ~~la~~l~~~~~-p~~~-----~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~ 168 (443)
T PRK08297 95 ARFVDTFARVLG-DPEL-----PHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSL 168 (443)
T ss_pred HHHHHHHHhhcC-CCCC-----CEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhh
Confidence 345556666653 2211 258999999999999999998753211000111 123444444455443333333
Q ss_pred cCCCC------C--CEEEEecCC------CCC-------cccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc----
Q 037144 195 VGIDR------K--NIRAIKTTK------SSS-------YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---- 249 (502)
Q Consensus 195 ~Glg~------~--~v~~v~~~~------~~~-------~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---- 249 (502)
.|... . ....+|... +.+ ..-+++++++.+.. .+..+.+|++.-.....|.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~iAavI~EPi~g~~G~~~pp~ 245 (443)
T PRK08297 169 TNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFER---HPHDIACFIAEPIQGEGGDNHFRP 245 (443)
T ss_pred cCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEccccCCCCCcCCCH
Confidence 33100 0 000111100 000 00123455566643 23446677776655556666
Q ss_pred CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCch-hhh-hhhcCC
Q 037144 250 DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPS-CLL-STLSTN 327 (502)
Q Consensus 250 dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~-~l~-~~~~~~ 327 (502)
+.+++|.++|++||+++++|.++.|+.....-+..-..++ ..|.+++ .|.+ | .|.++++++- ... ..+..
T Consensus 246 ~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l--~--~~a~l~~~~i~~~~~~~~~~- 317 (443)
T PRK08297 246 EFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-RPDIVAF--GKKT--Q--VCGIMAGRRVDEVEDNVFAV- 317 (443)
T ss_pred HHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCC-CCCEEEe--cccc--c--ccceecchHHHHhhhhhccC-
Confidence 5699999999999999999999977533221111111233 5898886 4876 3 3444444321 110 01100
Q ss_pred cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCe--EE
Q 037144 328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRF--EV 401 (502)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~--~l 401 (502)
..+... |+ ++.+.......++++.+..+ +++++..++.++|.+.|++ .|.+ ++
T Consensus 318 ~~~~~~-----------------T~-~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~v 376 (443)
T PRK08297 318 SSRINS-----------------TW-GGNLVDMVRARRILEVIEED---GLVENAARQGEYLLARLEELAAEFPAVVSNV 376 (443)
T ss_pred ccccCC-----------------CC-CccHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHCCCcceee
Confidence 000000 11 11111222333344444332 4566677777777777765 3322 22
Q ss_pred ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCC
Q 037144 402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNS 481 (502)
Q Consensus 402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~ 481 (502)
- ....++.+.+.. ......+.+.+.++|.++.+. +...+|++.. .
T Consensus 377 r--g~G~~~~i~~~~----------------------------~~~~~~~~~~l~~~Gvl~~~~----~~~~lr~~P~-l 421 (443)
T PRK08297 377 R--GRGLMCAFDLPT----------------------------TADRDEVIRRLWEEGVLVLPC----GERSIRFRPA-L 421 (443)
T ss_pred e--ccceEEEEEecC----------------------------HHHHHHHHHHHHHCCEEEecC----CCCeEEEECC-c
Confidence 1 223455555532 122456777888888654322 3357899764 4
Q ss_pred CCcHHHHHHHHHHHHHHHHhC
Q 037144 482 MTMESHVRAAWTVVQEHLEAF 502 (502)
Q Consensus 482 ~t~~~di~~~~~~l~~~~~~~ 502 (502)
..+++|||++++.|.++++++
T Consensus 422 ~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 422 TVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred cCCHHHHHHHHHHHHHHHHhh
Confidence 457779999999999987653
No 361
>PRK06148 hypothetical protein; Provisional
Probab=99.24 E-value=2.8e-08 Score=112.65 Aligned_cols=321 Identities=13% Similarity=0.074 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+.+.++.+.|++++.-+.+ ..+|++||||||..|++.||... | ++.+|......|-...-+..+.
T Consensus 663 ~~~~~lAe~L~~~~p~~~~-------~v~f~nSGsEA~e~AlklAr~~t----G----r~~ii~~~~~YHG~t~~a~s~s 727 (1013)
T PRK06148 663 DAIVAYAERLTATLPDGLT-------VAFFVNSGSEANSLALRLARAHT----G----QRDAIVLDHAYHGTTTELIDLS 727 (1013)
T ss_pred HHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHhc----C----CCeEEEEcCCccCCCcchhhcC
Confidence 4455677778887642211 47999999999999999998752 1 2233444444453322222211
Q ss_pred --------CCC-CCCEEEEecCCC--CCcc-cC-------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----h
Q 037144 196 --------GID-RKNIRAIKTTKS--SSYG-LS-------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----L 252 (502)
Q Consensus 196 --------Glg-~~~v~~v~~~~~--~~~~-~d-------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l 252 (502)
+.+ ...+..++.... ..+. -+ .+.++++++.....+..+.+|++.......|.+-| +
T Consensus 728 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl 807 (1013)
T PRK06148 728 PYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYL 807 (1013)
T ss_pred chhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHH
Confidence 111 113333332100 0111 11 24567666543333445667777665556677766 9
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCcc-chhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccc
Q 037144 253 KPLCDVAKQFGIWVHVDAAYAGSACICPE-FRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYL 331 (502)
Q Consensus 253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~-~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl 331 (502)
++|.++|++||+.+++|.++.|+...... +..-..++ ..|.++++ |.++..+..|.++.++. . .+.+.....+.
T Consensus 808 ~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv-~PDivt~g--K~lggG~Plgav~~~~e-i-~~~~~~g~~~~ 882 (1013)
T PRK06148 808 REVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGV-VPDIVTMG--KPIGNGHPMGAVVTTRE-I-ADSFDNGMEYF 882 (1013)
T ss_pred HHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCC-Ccceeeec--ccccCCcceEEEEEcHH-H-HhhccCCCccc
Confidence 99999999999999999998766332221 11111244 68998874 99987788999988633 2 23332111111
Q ss_pred cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCC--Cee
Q 037144 332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFPR--NFS 408 (502)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~~--~~~ 408 (502)
+ |+ .+.+..+.+..++++.+..+ ++.++..++.++|+++|+++ ....++... ...
T Consensus 883 -~-----------------Tf-~gnpla~aaa~a~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl 940 (1013)
T PRK06148 883 -N-----------------TF-GGNPVSCAIGLAVLDIIEDE---DLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGL 940 (1013)
T ss_pred -c-----------------CC-CCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeece
Confidence 0 10 11122223334445444333 45566777778887777653 111122111 122
Q ss_pred EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144 409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV 488 (502)
Q Consensus 409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di 488 (502)
++.+.+..... ......+....+.+.+.++|.++ .+... ...++|+... ...++++|
T Consensus 941 ~~gvel~~~~~--------------------~~~~~~~~~~~i~~~~~~~Gvl~-~~~g~-~~~vlr~~Pp-l~it~~~i 997 (1013)
T PRK06148 941 FLGIELVTDRK--------------------TKAPATAIARYVKNGARERGILI-GTEGP-HDNVLKIRPP-LIFSRADA 997 (1013)
T ss_pred EEEEEecCCcc--------------------ccCccHHHHHHHHHHHHhCCeEE-eccCC-CCCEEEEeCC-ccCCHHHH
Confidence 33444432110 00000234567888888889754 32211 1367898864 55677899
Q ss_pred HHHHHHHHHHHHh
Q 037144 489 RAAWTVVQEHLEA 501 (502)
Q Consensus 489 ~~~~~~l~~~~~~ 501 (502)
|++++.+.+++.+
T Consensus 998 d~~l~~l~~~l~~ 1010 (1013)
T PRK06148 998 DHLLEVLDDVLAA 1010 (1013)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988764
No 362
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.24 E-value=1.6e-08 Score=104.38 Aligned_cols=315 Identities=10% Similarity=-0.017 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+.+.++.+.|.+++.-+. ...+|+++||+|+-.|+..||.....+ +..+ +..+|......|-.-.-+..+.
T Consensus 87 ~~~~~lae~L~~~~p~~~-------~~v~f~~sGseAve~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~a~s~~ 157 (429)
T PRK06173 87 EPAVELAQKLLEILPPSL-------NKIFFADSGSVAVEVAMKMALQYQQAK-GEVQ-RTKFATIRSGYHGDTWHAMSVC 157 (429)
T ss_pred HHHHHHHHHHHhhCCCCc-------CEEEEeCCchHHHHHHHHHHHHHHHHh-CCCC-CcEEEEECCCcCCcchhhhccC
Confidence 344556677777763211 258999999999999999999753222 2111 2234444444554322222221
Q ss_pred CC----------CCCCEEEEecCCCC---C-cccCHHHHHHHHHHHHhcCCccEEEEEecC-CccccccC----ChhHHH
Q 037144 196 GI----------DRKNIRAIKTTKSS---S-YGLSAESVLSQINLDVEAELIPLFLCATVG-TTAITAVD----PLKPLC 256 (502)
Q Consensus 196 Gl----------g~~~v~~v~~~~~~---~-~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g-tt~~G~id----pl~eI~ 256 (502)
|- ....+..+|..... . ..-+++.|++.|.. .+..+.+|++... ....|.+- =+++|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~---~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~ 234 (429)
T PRK06173 158 DPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQ---KGDEIAALILEPVVQGAGGMYFYSPTYLVKAR 234 (429)
T ss_pred CCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHh---CCCcEEEEEEcchhhccCCcccCCHHHHHHHH
Confidence 10 01123444432100 0 01246667777753 2234556666543 44445552 388999
Q ss_pred HHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCc--ccccC
Q 037144 257 DVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNP--QYLKN 333 (502)
Q Consensus 257 ~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~--~yl~~ 333 (502)
++|++||+++++|.++.|+.-...-+.....++ ..|.++ ..|.++..+ .++.++.++. . .+.+.... .+...
T Consensus 235 ~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~--~gK~l~gG~~p~~a~~~~~~-i-~~~~~~~~~~~~~~~ 309 (429)
T PRK06173 235 ELCDQYGVLLIFDEIATGFGRTGKLFALEHAGV-VPDIMC--IGKALTGGYLTLSATITTEA-I-AQTICSGEAKCFMHG 309 (429)
T ss_pred HHHHHcCCeEEecchhcCCCcCCcchHHHhcCC-CCCEEE--eehhhhCCccccceEEecHH-H-HHHHhcCCCCccccC
Confidence 999999999999999965322111111111234 478887 469886553 5777776543 2 22332110 11111
Q ss_pred ccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEE
Q 037144 334 EATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP--RNFSLVC 411 (502)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~~~~~v~ 411 (502)
. |. .+.+..+....++++.+-.+ ...++..++.++|++.|+++.++..+.. -...++.
T Consensus 310 ~----------------T~-~g~p~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~ 369 (429)
T PRK06173 310 P----------------TF-MANPLACAIAAESIRLLLES---PWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGV 369 (429)
T ss_pred C----------------CC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEE
Confidence 0 00 01122334445555555333 3467778888899888875433332221 1233455
Q ss_pred EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHH
Q 037144 412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAA 491 (502)
Q Consensus 412 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~ 491 (502)
+.+.... ....+.+.+.++|.+. .+. + .++|+... ...+++||+++
T Consensus 370 iel~~~~----------------------------~~~~i~~~l~e~Gi~v-~~~---g-~~l~~~Pp-l~it~~ei~~~ 415 (429)
T PRK06173 370 VEMKEPV----------------------------NMATLQPRFVEHGIWV-RPF---G-KLVYIMPP-FIISPDELSQL 415 (429)
T ss_pred EEeCCcc----------------------------cHHHHHHHHHHCCeEE-Eec---C-CEEEEeCC-ccCCHHHHHHH
Confidence 5553210 1346777888888643 332 2 47999863 55778899999
Q ss_pred HHHHHHHHHh
Q 037144 492 WTVVQEHLEA 501 (502)
Q Consensus 492 ~~~l~~~~~~ 501 (502)
++.|.++..+
T Consensus 416 ~~~l~~~l~~ 425 (429)
T PRK06173 416 TSGLLRVLKQ 425 (429)
T ss_pred HHHHHHHHHH
Confidence 9999988754
No 363
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.24 E-value=1.2e-08 Score=105.06 Aligned_cols=310 Identities=9% Similarity=-0.025 Sum_probs=161.7
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G 196 (502)
...++.+.|+++.+.+- ...+|+++||+|+..|+..||.....+ +..+ +.-+|......|-...-+..+.+
T Consensus 84 ~~~~lae~L~~~~p~~~-------~~v~f~~SGseA~e~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~als~~~ 154 (422)
T PRK05630 84 PAIKLTRKLLNLTDNGL-------DHVFYSDSGSVSVEVAIKMALQYSKGQ-GHPE-RTRLLTWRSGYHGDTFAAMSVCD 154 (422)
T ss_pred HHHHHHHHHHhhCCCCc-------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCccHHHhccCC
Confidence 34456677777763221 157999999999999999998763221 2111 12244445555643333333222
Q ss_pred C----------CCCCEEEEecCCCCCcccCH-------HHHHHHHHHHHhcCCccEEEEEecC-Ccccccc----CChhH
Q 037144 197 I----------DRKNIRAIKTTKSSSYGLSA-------ESVLSQINLDVEAELIPLFLCATVG-TTAITAV----DPLKP 254 (502)
Q Consensus 197 l----------g~~~v~~v~~~~~~~~~~d~-------~~Le~~i~~~~~~g~~p~~Vv~t~g-tt~~G~i----dpl~e 254 (502)
- ....+..+|.... ...+. +.+++.+.+ ...+|++.-. ....|.+ +.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~------~iAAvi~EPi~qg~gG~~~~~~~~l~~ 226 (422)
T PRK05630 155 PEGGMHSLWKGTLPEQIFAPAPPV--RGSSPQEISEYLRSLELLIDE------TVAAIIIEPIVQGAGGMRFHDVALIEG 226 (422)
T ss_pred CcccccccccccCCCCeEcCCCcc--cCCChHHHHHHHHHHHHHHhh------ceEEEEEechhcCcCCcccCCHHHHHH
Confidence 1 0012344443311 01122 333443432 2345555432 3334543 56999
Q ss_pred HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCC--cccc
Q 037144 255 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTN--PQYL 331 (502)
Q Consensus 255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~--~~yl 331 (502)
|.++|++||+++++|.++.|+.....-+.....++ ..|.+++ -|.++..+ ..|.+++++.- .+.+... ...+
T Consensus 227 lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~i--~~~~~~~~~~~~~ 301 (422)
T PRK05630 227 VRTLCDKHDILLIADEIATGFGRTGELFATLAAGV-TPDIMCV--GKALTGGFMSFAATLCTDKV--AQLISTPNGGGAL 301 (422)
T ss_pred HHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCC-CCCeeee--echhhcCccccceeeccHHH--HHHHhccCCCCcc
Confidence 99999999999999999866532221111111233 5788876 59986542 46666665432 2233211 0000
Q ss_pred cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeE
Q 037144 332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP--RNFSL 409 (502)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~~~~~ 409 (502)
... .|+ .+.+..+....++++.+..+ ...++..++.++|++.|+++.....+.. -...+
T Consensus 302 ~h~---------------~T~-~g~Pla~aaa~aaL~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~ 362 (422)
T PRK05630 302 MHG---------------PTF-MANPLACAVAHASLEIIETG---MWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAI 362 (422)
T ss_pred ccC---------------CCC-cCCHHHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccE
Confidence 000 011 11122233344555555333 3455777778888877764321111111 11234
Q ss_pred EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144 410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR 489 (502)
Q Consensus 410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~ 489 (502)
+.+.+.... ....+.+.+.++|.+. .+. + .++|+... ...+++|||
T Consensus 363 ~~ie~~~~~----------------------------~~~~~~~~~~~~Gl~~-~~~---g-~~l~~~Pp-L~it~~~i~ 408 (422)
T PRK05630 363 GVVEMEQPV----------------------------DMEEATQAAVDHGVWL-RPF---G-RLVYVMPP-YITTSEQIA 408 (422)
T ss_pred EEEEECCcc----------------------------cHHHHHHHHHHCCeEE-Eec---C-CEEEEECC-ccCCHHHHH
Confidence 444443210 0235677777888643 221 3 47898763 557888999
Q ss_pred HHHHHHHHHHHh
Q 037144 490 AAWTVVQEHLEA 501 (502)
Q Consensus 490 ~~~~~l~~~~~~ 501 (502)
++++.|+++.++
T Consensus 409 ~~~~~l~~al~~ 420 (422)
T PRK05630 409 QICAALAAAVKA 420 (422)
T ss_pred HHHHHHHHHHhc
Confidence 999999987653
No 364
>PRK06917 hypothetical protein; Provisional
Probab=99.23 E-value=5.6e-08 Score=100.95 Aligned_cols=333 Identities=12% Similarity=0.025 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQ 193 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~ 193 (502)
.+.+.++.+.|.+++..... ..+|+++||+|+..|+..||.....+ +.. ++..|+. ....|-...-+..
T Consensus 73 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~~~~r-g~t--~r~~ii~~~~~yHG~t~~als 142 (447)
T PRK06917 73 SEPAEKLAKKLSDLSPGDLN-------WSFFVNSGSEANETAMKIAIQHFQER-GIQ--GKHKILSRWMSYHGITMGALS 142 (447)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCChHHHHHHHHHHHHHHHHhc-CCC--CCCEEEEECCCcCCccHHHHH
Confidence 34555677888887743222 47999999999999999998764322 111 2333443 4344543333333
Q ss_pred HcCCCC---------CCEEEEecCCCCCc----------ccCHHHHHHHHHHHHhcCCccEEEEEecCCcc-ccccC---
Q 037144 194 IVGIDR---------KNIRAIKTTKSSSY----------GLSAESVLSQINLDVEAELIPLFLCATVGTTA-ITAVD--- 250 (502)
Q Consensus 194 ~~Glg~---------~~v~~v~~~~~~~~----------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~-~G~id--- 250 (502)
..|... ..+..+|....... .-+++.|++.++... +..+.+|++.-.... -|.+-
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~iAAvi~EPi~g~~gG~~~p~~ 220 (447)
T PRK06917 143 MSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIG--AEHIAAFIAEPIIGAAGAAVVPPK 220 (447)
T ss_pred hcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcC--CCceEEEEEeccccCcCceecCCH
Confidence 333210 01233332110000 012456676665321 123556666543332 23442
Q ss_pred -ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCc
Q 037144 251 -PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNP 328 (502)
Q Consensus 251 -pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~ 328 (502)
=+++|.++|++||+.+++|.++.|+.....-+.....++ ..|.+++ .|.++..+ +.|.++.++. . .+.+....
T Consensus 221 ~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv-~PDi~~~--gK~l~~G~~Pi~a~~~~~~-i-~~~~~~~~ 295 (447)
T PRK06917 221 GYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGV-EPDIMTL--GKGLGAGYTPIAATVVSDR-V-MEPILRGS 295 (447)
T ss_pred HHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCC-CCCEEEe--eehhccCCcceEEEEEcHH-H-HHHHhccC
Confidence 288999999999999999999876533222111111234 5788777 49987654 5777777643 2 23332211
Q ss_pred ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--
Q 037144 329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVAFPR-- 405 (502)
Q Consensus 329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~~~~-- 405 (502)
..+.... |. .+.+....+..++++.+..+ ++.++..++.++|++.|+++- ...++...
T Consensus 296 ~~~~~~~---------------T~-~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG 356 (447)
T PRK06917 296 RSIMSGH---------------TL-SANPLSAATALAVLEYMEKH---NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRG 356 (447)
T ss_pred ccccccc---------------CC-CCCHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEee
Confidence 1111100 00 11122223334445444332 456677777788877776531 12222111
Q ss_pred CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee---ECCEEEEEEEecCCC
Q 037144 406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI---VGGIYVLRFAAGNSM 482 (502)
Q Consensus 406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~ 482 (502)
...++.+.+....... . ......+....+.+.+.++|.++..... ......+|++.. ..
T Consensus 357 ~Gl~~~ie~~~~~~~~---------------~--~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Pp-l~ 418 (447)
T PRK06917 357 KGLLIGVEFVADKKTK---------------Q--PFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPP-MT 418 (447)
T ss_pred cceEEEEEEeccCCcC---------------C--CCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECC-Cc
Confidence 1223444443211000 0 0000023456788888889975432211 112357898753 44
Q ss_pred CcHHHHHHHHHHHHHHHHh
Q 037144 483 TMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 483 t~~~di~~~~~~l~~~~~~ 501 (502)
.+++|||++++++.+++++
T Consensus 419 it~~eid~~~~~l~~~l~~ 437 (447)
T PRK06917 419 ITYSELDELLSIFAKSVEE 437 (447)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 6778999999999988754
No 365
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.22 E-value=3.7e-08 Score=102.68 Aligned_cols=330 Identities=10% Similarity=0.012 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+.+.++.+.|++++.... ...+|++|||+|+..|+..||.....+ +..+ +..+|......|-...-+..+.
T Consensus 99 ~~~~~lae~L~~~~p~~~-------~~v~f~~SGseAve~AlklAr~~~~~~-g~tg-r~~ii~~~~~YHG~t~~als~s 169 (460)
T PRK06916 99 VPSILLAEKLIEVVPEGL-------KKVFYSDSGATAVEIAIKMAFQYWQNK-GKPK-KQRFVTLKNAYHGDTIGAVSVG 169 (460)
T ss_pred HHHHHHHHHHHHhCCCCC-------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCcCCcccHHhHhcc
Confidence 445567777888764221 157999999999999999999753221 1111 2234444544565444344433
Q ss_pred CCC---------CCCEEEEecCCCCC--c--------ccCHHHHHHHHHHHHhcCCccEEEEEec-CCccccccC----C
Q 037144 196 GID---------RKNIRAIKTTKSSS--Y--------GLSAESVLSQINLDVEAELIPLFLCATV-GTTAITAVD----P 251 (502)
Q Consensus 196 Glg---------~~~v~~v~~~~~~~--~--------~~d~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt~~G~id----p 251 (502)
|-. ...+..+|...... + .-+++.+++.++. .+..+.+|++.- .....|.+- =
T Consensus 170 ~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~f 246 (460)
T PRK06916 170 AIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKGY 246 (460)
T ss_pred CCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHHH
Confidence 321 01234444321000 0 1235666776652 223355666654 244456553 3
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCccc
Q 037144 252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNPQY 330 (502)
Q Consensus 252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~~y 330 (502)
+++|.++|++||+.+++|.++.|+.....-+.....++ ..|.++++ |.++..+ +.|.++.++. . .+.+... +
T Consensus 247 l~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~~Pi~av~~~~e-i-~~~~~~~--~ 319 (460)
T PRK06916 247 LKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENV-TPDIMTAG--KGLTGGYLPIAITVTTDE-I-YNAFYGD--Y 319 (460)
T ss_pred HHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCC-CCCeeeee--hhhhcCccccceeeecHH-H-HHHhhcc--c
Confidence 88999999999999999999876533222111112244 58888874 8887663 6788877644 2 2223111 1
Q ss_pred ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--Cee
Q 037144 331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR--NFS 408 (502)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~--~~~ 408 (502)
... ... ....|. .+.+.......++++.+..+ .+.++..++.++|++.|+++....++... ...
T Consensus 320 ~~~---------~~~-~~~~T~-~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl 385 (460)
T PRK06916 320 EEQ---------KTF-FHGHSY-TGNPLGCAVALANLELYEKT---NLIEQVARKTEYVATQLEDLFALKHVGDIRQLGL 385 (460)
T ss_pred ccc---------Ccc-ccCCCC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCc
Confidence 000 000 000011 11122222333444444333 45677888888888888765222112111 112
Q ss_pred EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144 409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV 488 (502)
Q Consensus 409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di 488 (502)
++.+.+...... .+ .. ... ......+...+.++|.++ .+. + ..+|+... ...+++||
T Consensus 386 m~giel~~~~~~-----------~~----~~-~~~-~~~~~~i~~~~~~~Gvl~-~~~---g-~~l~~~Pp-l~it~~~i 442 (460)
T PRK06916 386 MVGIELVKNKET-----------KE----PF-EWT-ERVGVQVCKRSRELGMLT-RPL---G-NTIVFMPP-LASTIDEL 442 (460)
T ss_pred eeeEEeeccccc-----------cc----CC-Cch-hhHHHHHHHHHHHCCeEE-Eec---C-CEEEEeCC-cccCHHHH
Confidence 333333221000 00 00 000 122456778888889654 221 2 47888753 45677899
Q ss_pred HHHHHHHHHHHHh
Q 037144 489 RAAWTVVQEHLEA 501 (502)
Q Consensus 489 ~~~~~~l~~~~~~ 501 (502)
+++++++.+.+++
T Consensus 443 d~~~~~l~~~l~~ 455 (460)
T PRK06916 443 DEMLRILYKAISD 455 (460)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988764
No 366
>PRK07483 hypothetical protein; Provisional
Probab=99.21 E-value=7.5e-08 Score=99.87 Aligned_cols=330 Identities=12% Similarity=0.073 Sum_probs=170.1
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHHH
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQI 194 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~~ 194 (502)
+...++.+.|.+++.-.. ...+|++|||+|+-.|+..||.....+ +.. .+..|+ .....|-...-+..+
T Consensus 73 ~~~~~lae~L~~~~p~~~-------~~v~f~~sGsEAve~AlklAr~~~~~~-g~~--~r~~Ii~~~~~YHG~t~~a~s~ 142 (443)
T PRK07483 73 EPAEALADRLVAAAPAGL-------EHVYFVSGGSEAVEAALKLARQYFVEI-GQP--QRRHFIARRQSYHGNTLGALAI 142 (443)
T ss_pred HHHHHHHHHHHHhCCCCC-------CEEEEcCCcHHHHHHHHHHHHHHHHhc-CCC--CCcEEEEECCCcCCcCHHHhhh
Confidence 344456677777763211 157999999999999999999763221 211 233343 344455433323232
Q ss_pred cCC---------CCCCEEEEecCCCCCccc-------------CHHHHHHHHHHHHhcCCccEEEEEecCCc-cccccCC
Q 037144 195 VGI---------DRKNIRAIKTTKSSSYGL-------------SAESVLSQINLDVEAELIPLFLCATVGTT-AITAVDP 251 (502)
Q Consensus 195 ~Gl---------g~~~v~~v~~~~~~~~~~-------------d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt-~~G~idp 251 (502)
.|- +...+..+|... .++- .+++|++++... ....+.+|++..... ..|.+-|
T Consensus 143 s~~~~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvivEPiqg~~gG~~~~ 218 (443)
T PRK07483 143 GGNAWRREPFAPLLIEAHHVSPCY--AYREQRAGESDEAYGQRLADELEAKILEL--GPDTVAAFVAETVVGATAGAVPP 218 (443)
T ss_pred cCCcccccccCCCCCCCEEeCCCc--cccccccCCCHHHHHHHHHHHHHHHHHhc--CCCceEEEEEeCcccCcCCeEeC
Confidence 221 111233444221 0111 125566655421 112344555544332 2355544
Q ss_pred ----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcC
Q 037144 252 ----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLST 326 (502)
Q Consensus 252 ----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~ 326 (502)
+++|.++|++||+.+++|..+.|+.....-+.....++ ..|.++++ |.++..+ +.|.++++++- .+.+..
T Consensus 219 ~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~~Pi~av~~~~~i--~~~~~~ 293 (443)
T PRK07483 219 VPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGV-APDLVTIA--KGLGAGYQPIGAVLASDRI--YDAIAD 293 (443)
T ss_pred CHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCC-CCCeeeeh--hhhccCccccEEEEEcHHH--HHHHhc
Confidence 89999999999999999999877643222111111234 58988885 8887664 68888886542 223322
Q ss_pred CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCC
Q 037144 327 NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFPR 405 (502)
Q Consensus 327 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~~ 405 (502)
...++.... |. .+.+.......++++.+-+ .++.++..++.++|++.|+++ ....++...
T Consensus 294 ~~~~~~h~~---------------T~-~gnpl~~aaa~a~l~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v 354 (443)
T PRK07483 294 GSGFFQHGH---------------TY-LGHATACAAALAVQRVIAE---DGLLANVRARGEQLRARLRERLGQHPHVGDI 354 (443)
T ss_pred CCCccccCC---------------CC-CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhcCCCeeeE
Confidence 111111110 00 1111122233334444333 245667777778888777642 122222111
Q ss_pred --CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee-eECC--EEEEEEEecC
Q 037144 406 --NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA-IVGG--IYVLRFAAGN 480 (502)
Q Consensus 406 --~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~g--~~~lR~~~~~ 480 (502)
...++.+.+...... . ...+. -.+....+.+.+.++|.++.... ...+ ..++|++..
T Consensus 355 RG~Glm~gie~~~~~~~-----------~----~~~~~--~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~Pp- 416 (443)
T PRK07483 355 RGRGLFVGVELVADRAT-----------K----APFDP--ALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPP- 416 (443)
T ss_pred eecccEEEEEEeecccc-----------c----CCCCc--hhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECC-
Confidence 122344444221000 0 00000 01234567888888997643321 1111 247998753
Q ss_pred CCCcHHHHHHHHHHHHHHHHh
Q 037144 481 SMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 481 ~~t~~~di~~~~~~l~~~~~~ 501 (502)
...+++|||+++++|.+.+.+
T Consensus 417 L~it~~eid~~~~~l~~~l~~ 437 (443)
T PRK07483 417 FIITAAQIDEIVERLGDAIDA 437 (443)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 457888999999999987654
No 367
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.21 E-value=3.1e-08 Score=103.20 Aligned_cols=329 Identities=11% Similarity=0.019 Sum_probs=170.4
Q ss_pred HHHHHHHHHHHHhcCCC---CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH
Q 037144 116 ELENIVMDWLGQMLDLP---KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA 192 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~---~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa 192 (502)
+...++.+.|.+++.-. ... ...+|+++||+||..|+..||.....+ +..+ +..+|......|-...-+.
T Consensus 107 ~~~~~lae~L~~~~p~~~~~~~~-----~~v~f~~sGSEAvE~AlKlAr~~~~~~-g~~~-r~~ii~~~~syHG~t~gal 179 (472)
T PRK08742 107 EPAVQLAEQLLAIAPRQDGRAPL-----SKVFYADNGSAGVEVALKMAFHYFHNR-GEHR-RTRFIALENGYHGETIGAL 179 (472)
T ss_pred HHHHHHHHHHHHhCCCcccCCCC-----CEEEEeCCchHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCCchhhh
Confidence 34456777777776321 011 258999999999999999999864332 2111 2234444544554333333
Q ss_pred HHcCCC---------CCCEEEEecCCCC--Ccc--------cCHHHHHHHHHHHHhcCCccEEEEEec-CCccccccC--
Q 037144 193 QIVGID---------RKNIRAIKTTKSS--SYG--------LSAESVLSQINLDVEAELIPLFLCATV-GTTAITAVD-- 250 (502)
Q Consensus 193 ~~~Glg---------~~~v~~v~~~~~~--~~~--------~d~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt~~G~id-- 250 (502)
...|.. ...+..+|..... ... -+++.+++.+.. .+..+.+|++.- .....|.+-
T Consensus 180 s~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~iAAvI~EPviqg~gG~~~~p 256 (472)
T PRK08742 180 AVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQ---SPGEICALILEPRLQCAGGMRMHH 256 (472)
T ss_pred hccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEccccccCCCcccCC
Confidence 332221 0123444432100 000 135667777652 223455666654 234446543
Q ss_pred --ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCC
Q 037144 251 --PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTN 327 (502)
Q Consensus 251 --pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~ 327 (502)
=++++.++|++||+.+++|..+.|+.....-+.....++ ..|.++++ |.++..+ +.|.++++++- .+.+...
T Consensus 257 ~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv-~PDiv~~g--Kgl~gG~~Plaav~~~~ei--~~~~~~~ 331 (472)
T PRK08742 257 PAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV-MPDLLCLS--KGLTGGFLPLSAVLATQQL--YDAFLDD 331 (472)
T ss_pred HHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC-CCCEEEEc--ccccCCCCCcceeeccHHH--HHHhhcc
Confidence 388999999999999999999877643322221112244 58999985 9887664 67787776442 2233211
Q ss_pred c--ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 037144 328 P--QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR 405 (502)
Q Consensus 328 ~--~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~ 405 (502)
. ..+... .|. .+.+....+..++++.+-++ +++++..++.++|.+.++.+....++...
T Consensus 332 ~~~~~~~h~---------------~T~-~gnpl~~Aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~~~~~~~~~~i~dv 392 (472)
T PRK08742 332 SRERAFLHS---------------HSY-TGNPLACAAALATLDIFADD---DVIARNQPTAARMTQLAAQIGEHPHVADV 392 (472)
T ss_pred CccCccCcC---------------CCC-CccHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHhcCCCeeeE
Confidence 0 000000 011 11122223333444444333 34555666666666655443222222111
Q ss_pred --CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCC
Q 037144 406 --NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMT 483 (502)
Q Consensus 406 --~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t 483 (502)
...++.+.+....... + ...........+.+++.++|.+.. +. | .+||+... ...
T Consensus 393 RG~Gl~~giel~~~~~~~---------------~--~~~~~~~~~~~~~~~~~~~Gll~~-~~---g-~vi~~~Pp-L~i 449 (472)
T PRK08742 393 RQAGMVVAFELTRGGNKR---------------T--PFPPAARVGLHAYRAALARGVVLR-PL---G-DVLYWMPP-YCV 449 (472)
T ss_pred eccceEEEEEeccCcccc---------------c--cCCchhHHHHHHHHHHHHCCeEEE-ec---C-CEEEEECC-CCC
Confidence 1223444443211000 0 000001233567777888896542 21 2 47999863 567
Q ss_pred cHHHHHHHHHHHHHHHHh
Q 037144 484 MESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 484 ~~~di~~~~~~l~~~~~~ 501 (502)
+++||+.+++.|.+..++
T Consensus 450 t~~ei~~~~~~l~~~l~~ 467 (472)
T PRK08742 450 DEAQLALLADTTRHAIDE 467 (472)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 888999999999988764
No 368
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.21 E-value=3.2e-08 Score=102.97 Aligned_cols=328 Identities=12% Similarity=0.048 Sum_probs=169.0
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQ 193 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~ 193 (502)
++.+.++.+.|.+++...... ....++++|||+|+..|+..||... ++..|+ .....|-...-+..
T Consensus 100 ~~~~~~lAe~L~~~~p~~~~~----~~~~f~~~SGsEAve~AlklAr~~t---------gr~~Ii~~~~~yHG~t~~als 166 (459)
T PRK06931 100 TPLKDAFSEYLLSLLPGQGKE----YCLQFTGPSGADAVEAAIKLAKTYT---------GRSNVISFSGGYHGMTHGALA 166 (459)
T ss_pred CHHHHHHHHHHHHhCCCcccc----ceEEEeCCCcHHHHHHHHHHHHHhc---------CCCeEEEECCCcCCccHHHHh
Confidence 455566778888877432110 0023556899999999999998752 233344 34444543333333
Q ss_pred HcCCC---------CCCEEEEecCCCCCc------ccCHHHHHHHHHHHHh----cCCccEEEEEecCCccccccCC---
Q 037144 194 IVGID---------RKNIRAIKTTKSSSY------GLSAESVLSQINLDVE----AELIPLFLCATVGTTAITAVDP--- 251 (502)
Q Consensus 194 ~~Glg---------~~~v~~v~~~~~~~~------~~d~~~Le~~i~~~~~----~g~~p~~Vv~t~gtt~~G~idp--- 251 (502)
+.|-. ...+..+|....-.. .-+.+.+++.+.+... ....+.+|++.-.....|.+-|
T Consensus 167 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~ 246 (459)
T PRK06931 167 VTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVE 246 (459)
T ss_pred hcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHH
Confidence 32210 113445553310000 0134445444443322 1233556666554444566533
Q ss_pred -hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCccc
Q 037144 252 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQY 330 (502)
Q Consensus 252 -l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~y 330 (502)
+++|.++|++||+.+++|..+.|+.....-+..-..++ ..|.++++ |.++..++.|.+..++. + +.+. +..
T Consensus 247 yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv-~PDivt~g--K~l~gG~Pi~av~~~~~--~-~~~~--~~~ 318 (459)
T PRK06931 247 WLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGI-EPDIIVMS--KAVGGGLPLAVLGIKKE--F-DAWQ--PGG 318 (459)
T ss_pred HHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCC-CCCEEEec--ccccCCcceeeeeeHHH--H-hhcc--CCC
Confidence 89999999999999999999877643322111112244 58998885 88876677888776532 2 2331 111
Q ss_pred ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecC--CCe
Q 037144 331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFP--RNF 407 (502)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~--~~~ 407 (502)
..+ |+ .+.+..+....++++.+..+ ...++..++.++|.+.|+++ ....++.. -..
T Consensus 319 ~~~-----------------T~-~gnpla~aaala~L~~l~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~G 377 (459)
T PRK06931 319 HTG-----------------TF-RGNQLAMATGLTTLKILKEE---NLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRG 377 (459)
T ss_pred CCC-----------------CC-CCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCc
Confidence 100 11 11122223333444444333 34566666777777776543 11111111 122
Q ss_pred eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144 408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH 487 (502)
Q Consensus 408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d 487 (502)
.++.+.+...... .+.......+ .+....+.+.+.++|.++.... ....++|+... ...+++|
T Consensus 378 lm~giel~~~~~~-------------~~~~~~~~~~-~~~~~~~~~~~~~~Gvl~~~~~--~~~~~l~~~Pp-l~it~~e 440 (459)
T PRK06931 378 LMIGIEIVDERQP-------------ADAMGSYPAD-GELAAAIQKACFENGLLLERGG--RNGNVVRLLPP-LLITQAE 440 (459)
T ss_pred eEEEEEEccCccc-------------ccccccCCcc-HHHHHHHHHHHHHCCcEEeecC--CCCCEEEEECC-CCcCHHH
Confidence 3445554321100 0000000000 1234567788888897543221 12357898864 4567789
Q ss_pred HHHHHHHHHHHHHh
Q 037144 488 VRAAWTVVQEHLEA 501 (502)
Q Consensus 488 i~~~~~~l~~~~~~ 501 (502)
||++++++.+.+++
T Consensus 441 id~~~~~l~~~l~~ 454 (459)
T PRK06931 441 CEEFIDRFEQALLA 454 (459)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887654
No 369
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.16 E-value=5.3e-08 Score=100.77 Aligned_cols=292 Identities=11% Similarity=0.020 Sum_probs=147.2
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHH---HhCccCC-CCeEEEeCCCCchhHHHHHHHcCCC-CC----CE---EEEec--
Q 037144 142 GGVIQGTTCEALLCTLTAARDRVLK---KIGRENI-SKLVVYSSDQTHCAFQKAAQIVGID-RK----NI---RAIKT-- 207 (502)
Q Consensus 142 ~g~~t~ggt~a~~~al~~a~~~~~~---~~~~~~~-~~~~v~~s~~~H~s~~~aa~~~Glg-~~----~v---~~v~~-- 207 (502)
..+|++|||+|+..|+..||...-+ ..|.... +..+|......|-...-+....|.. .. .. ..++.
T Consensus 105 ~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~ 184 (431)
T TIGR03251 105 HLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPK 184 (431)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCc
Confidence 5799999999999999999875211 0111000 1234444544564433333333321 00 00 00111
Q ss_pred -----CCCC-C--c---ccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc----CChhHHHHHHHHhCCEEEeeccc
Q 037144 208 -----TKSS-S--Y---GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV----DPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 208 -----~~~~-~--~---~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i----dpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
+... . . .-+++++++.+.. .+..+.+|++.......|.+ +.+++|.++|++||+.+++|.++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~ 261 (431)
T TIGR03251 185 LTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQ 261 (431)
T ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecch
Confidence 0000 0 0 0123444445542 23456777777655566765 56999999999999999999999
Q ss_pred ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCch-hhhh-hhcCCcccccCccCCCCCcccccCCCcc
Q 037144 273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPS-CLLS-TLSTNPQYLKNEATDQEPKEQEVGYKDW 350 (502)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~-~l~~-~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 350 (502)
.|+-....-+.....++ ..|.++++ |.+ | .+|++ .+++- .... .+. .+.... .
T Consensus 262 tG~GrtG~~~a~~~~gv-~PDi~~~g--K~~--~-~~g~~-~~~~i~~~~~~~~~-~~~~~~-----------------~ 316 (431)
T TIGR03251 262 TGVGLTGTAWAYQQLGV-QPDIVAFG--KKT--Q-VCGIM-AGRRVDEVADNVFA-VPSRLN-----------------S 316 (431)
T ss_pred hccCccchHHHHHhcCC-CCCEEEec--ccC--c-cceEE-ecchHHHhhhhccc-CccccC-----------------C
Confidence 86543211111111234 68988865 654 3 24444 43321 1110 110 000000 0
Q ss_pred cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeEEEEEeecCcchhhhhhc
Q 037144 351 QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNFSLVCFRVTPSAVMDKLRTK 426 (502)
Q Consensus 351 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~ 426 (502)
|+ ++.+....+..++++.+..++ ..++..++.++|.+.|++ .+++..-......++.+.+.+
T Consensus 317 T~-~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~---------- 382 (431)
T TIGR03251 317 TW-GGNLVDMVRATRILEIIEEER---LVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPS---------- 382 (431)
T ss_pred CC-CCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCC----------
Confidence 11 111222233344555543333 334455556666655544 332211111223344555532
Q ss_pred ccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 427 YKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
......+.+.+.++|.++ .+ .+...+|++.. ...+++||++++++|.++
T Consensus 383 ------------------~~~~~~~~~~l~~~Gvl~-~~---~g~~~lr~~P~-l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 383 ------------------TADRDEVIRQLYREGVLL-LG---CGERSIRFRPP-LTVTREEIDAAIDAIRRV 431 (431)
T ss_pred ------------------HHHHHHHHHHHHhCCeEE-ec---CCCCeEEEECC-ccCCHHHHHHHHHHHHhC
Confidence 122456778888888654 22 12356899874 557788999999998763
No 370
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.15 E-value=1.9e-08 Score=104.10 Aligned_cols=172 Identities=13% Similarity=-0.005 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeC-CCCchhHHHH---
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS-DQTHCAFQKA--- 191 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s-~~~H~s~~~a--- 191 (502)
..+.++.+.|.+++...+ ..+|+++||+|+..|+..||... ++..|+.. ..++.++...
T Consensus 88 ~~~~~la~~l~~~~p~~~--------~v~f~~sGseA~e~AlklAr~~t---------gr~~i~~~~~~~~h~~~~~~~g 150 (431)
T PRK06209 88 AIELDAAESFLELIDGAD--------MVKFCKNGSDATSAAVRLARAYT---------GRDLVARCADHPFFSTDDWFIG 150 (431)
T ss_pred HHHHHHHHHHHHhCCccc--------eEEEecCHHHHHHHHHHHHHHHh---------CCCeEEEeccCccccccccccc
Confidence 345566778888763211 57999999999999999998752 23333332 1221111111
Q ss_pred HHH--cCCCCCCE-EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144 192 AQI--VGIDRKNI-RAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 192 a~~--~Glg~~~v-~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV 268 (502)
... .|.....+ ..+... .-|+++|++++++. +..+.+|++.......+..+++++|.++|++||+.+++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~---~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~ 222 (431)
T PRK06209 151 TTPMSAGIPASVSALTVTFR-----YNDIASLEALFEDH---PGRIACVILEPATADEPQDGFLHEVRRLCHENGALFIL 222 (431)
T ss_pred cCCCCCCCChhHhccccccC-----CCCHHHHHHHHHhC---CCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 000 01100000 011111 22889999998642 12344555544333334445599999999999999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeC
Q 037144 269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKD 316 (502)
Q Consensus 269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~ 316 (502)
|.++.|+... .......-++ ..|.+++ .|.++..+..|.++.++
T Consensus 223 DEv~tG~~~~-~~g~~~~~gv-~PDi~t~--gK~lggG~p~~av~~~~ 266 (431)
T PRK06209 223 DEMITGFRWH-MRGAQKLYGI-VPDLSCF--GKALGNGFAVSALAGKR 266 (431)
T ss_pred EcccccCCcC-cchhhHHhCC-Ccceeee--hhhhcCCcccEEEEEHH
Confidence 9998665321 1001111233 4687665 59988656677777753
No 371
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.14 E-value=1.1e-08 Score=98.85 Aligned_cols=304 Identities=13% Similarity=0.070 Sum_probs=174.6
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHHHHHHHHHHHHHHHHHhCccCCCCe-EEEeCCCCchhH
Q 037144 111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEALLCTLTAARDRVLKKIGRENISKL-VVYSSDQTHCAF 188 (502)
Q Consensus 111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~ 188 (502)
+..+..+-.++.+.++++++.|+++ .+.| .+|+|...-++.+..... .+. -|....-+..+.
T Consensus 45 sk~~~~v~~~a~~~lreLl~iPd~Y------~VlflqGGat~qf~~~p~nLl~~----------~~~~yv~~g~Ws~~a~ 108 (365)
T COG1932 45 SKEFKNVLEEAEKDLRELLNIPDDY------KVLFLQGGATGQFAMAPMNLLGK----------RGTDYVDTGAWSEFAI 108 (365)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCccHHHHHHHHHhhhcc----------cCceeEeeeehhHhHH
Confidence 4456667778899999999999886 4544 555555443333333221 111 122222222233
Q ss_pred HHHHHHcCCCCCCEEEEecCCCC-CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC-ChhHHHHHHHHhCCEE
Q 037144 189 QKAAQIVGIDRKNIRAIKTTKSS-SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD-PLKPLCDVAKQFGIWV 266 (502)
Q Consensus 189 ~~aa~~~Glg~~~v~~v~~~~~~-~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id-pl~eI~~i~~~~g~~l 266 (502)
..+ +.++-. -++..+.....+ ..-.+++..+ +.++. .+|..+...|.+|+-- +...+.. +..+
T Consensus 109 ~eA-~~~~~~-~~~~~~~~~~~~~~~iP~~~~~~--~~~~~------ayv~~~~NeTi~Gv~v~~~p~~~~-----~~~~ 173 (365)
T COG1932 109 KEA-KKVGKQ-PKLIDARIEEAGYGSIPDLSKWD--FSDND------AYVHFCWNETISGVEVPELPDIGS-----DGLL 173 (365)
T ss_pred HHH-HHhccc-ccccccceeccCccCCCChhhcc--cCCCc------cEEEEecCCcccceEccCCCCCCC-----CceE
Confidence 333 334420 022222211111 1233444333 22221 2799999999999853 3333332 2789
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCccccc
Q 037144 267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEV 345 (502)
Q Consensus 267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~ 345 (502)
++|++.+.+....| +++.|.|.++.+|.++ |-|.+++++|+... .+.-+. .|.-+
T Consensus 174 v~D~SS~ilsr~iD--------vsk~dviyagaQKnlG-paGltvvIvr~~~l-~r~~~~~~P~if-------------- 229 (365)
T COG1932 174 VADASSAILSRPID--------VSKYDVIYAGAQKNLG-PAGLTVVIVRPDLL-ERAESYTLPSIF-------------- 229 (365)
T ss_pred EEecccHHhcCCCC--------hhHcceEEEehhhccC-ccceEEEEEcHHHH-hcccccCCchHh--------------
Confidence 99998777666554 3388999999999986 66788888886543 222111 11111
Q ss_pred CCCcccccCCCCC--CchHHH---HHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-ecC---CCeeEEEEEee
Q 037144 346 GYKDWQITLCRRF--RSLKLW---VVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEV-AFP---RNFSLVCFRVT 415 (502)
Q Consensus 346 ~~~~~~~~~sr~~--~al~~~---~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l-~~~---~~~~~v~f~~~ 415 (502)
++.......|.-. ..+.++ ..++.+ ..-|++++.++..+.++.|.+.+.+. +|.. ... .....|||.+.
T Consensus 230 ~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s-~fy~~~v~~~~RS~mnV~f~~~ 308 (365)
T COG1932 230 DYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS-DFYRNLVAKANRSRMNVTFTLV 308 (365)
T ss_pred hchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC-CccccccchhhccceeEEEEcC
Confidence 1110011111110 112332 233333 45578899999999999999999987 4543 111 12346788876
Q ss_pred cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144 416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV 495 (502)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l 495 (502)
. .++.+.+.+++.++|.+...+. +-.+-+|+++-|. .+.++++.|++-+
T Consensus 309 ~----------------------------~~ld~~fv~eae~~gl~~lkGh--r~vgGmRasiynA-~~~e~veaL~~fm 357 (365)
T COG1932 309 D----------------------------AELDKGFVAEAEAAGLIYLKGH--RSVGGLRASIYNA-VPLEDVEALTDFM 357 (365)
T ss_pred c----------------------------HHHHHHHHHHHHHcCCceeccc--cCCCceeeeeecC-CCHHHHHHHHHHH
Confidence 4 4567788888888898776663 2233499998655 4556999999999
Q ss_pred HHHHHh
Q 037144 496 QEHLEA 501 (502)
Q Consensus 496 ~~~~~~ 501 (502)
+...++
T Consensus 358 ~~f~~~ 363 (365)
T COG1932 358 DWFEET 363 (365)
T ss_pred HHHHHh
Confidence 887654
No 372
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.12 E-value=1.2e-08 Score=95.02 Aligned_cols=318 Identities=10% Similarity=0.086 Sum_probs=169.6
Q ss_pred CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeC-C
Q 037144 104 VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS-D 182 (502)
Q Consensus 104 ~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s-~ 182 (502)
+.+.|....+-..+-+.+...+.+.+|+.-+. ....+|+|+..+.++.....- .+ ..+|..+- |+.+ .
T Consensus 66 ~~cnY~~pQG~~~li~ala~~l~~~ygwnit~-----~NIalTnGSQs~fFYlfNlF~----G~-~sdG~~k~-illPLa 134 (417)
T COG3977 66 ALCNYDGPQGKAVLIDALAKMLRREYGWNITA-----QNIALTNGSQSAFFYLFNLFA----GR-RSDGTEKK-ILLPLA 134 (417)
T ss_pred HHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc-----ceeeecCCccchHHHHHHHhc----Cc-cCCCccee-EeeccC
Confidence 34556666666778888999999999996442 267888887666655433211 11 12222222 2222 1
Q ss_pred CCchhHHHHHHHcCCCCCCEEEEe----cCCCC--CcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---CChh
Q 037144 183 QTHCAFQKAAQIVGIDRKNIRAIK----TTKSS--SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---DPLK 253 (502)
Q Consensus 183 ~~H~s~~~aa~~~Glg~~~v~~v~----~~~~~--~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---dpl~ 253 (502)
+.+..+.. .|+-.+.++... ..+.+ .+++|.++|+- .+.+ -+|+++-+||+||.+ +++.
T Consensus 135 PeYiGY~d----~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i--~e~~------g~ic~SRPtNPTGNVlTdeE~~ 202 (417)
T COG3977 135 PEYIGYAD----AGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHI--GEST------GAICVSRPTNPTGNVLTDEELA 202 (417)
T ss_pred hhhccccc----cccCccceeeccCCcccccccceeeccCHHHccc--cccc------ceEEecCCCCCCCCcccHHHHH
Confidence 12211111 111111222221 11112 36778877753 2333 389999999999998 6788
Q ss_pred HHHHHHHHhCCEEEeeccccccccc--CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccc
Q 037144 254 PLCDVAKQFGIWVHVDAAYAGSACI--CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYL 331 (502)
Q Consensus 254 eI~~i~~~~g~~lhVDaA~g~~~~~--~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl 331 (502)
+|.++|++||+.+++|-|||..+=. +.+....+. .--.++.+.+|.+.....||+++.. .+.. ++++....-+
T Consensus 203 kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~---~NiilC~SLSK~GLPG~R~GIiIan-e~vi-qaitnmn~ii 277 (417)
T COG3977 203 KLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWN---ENIILCMSLSKLGLPGSRCGIIIAN-EKVI-QAITNMNGII 277 (417)
T ss_pred HHHHHhhhcCCcEEEecccCCCCCceecccccccCC---CCEEEEeehhhcCCCCcceeEEEcc-HHHH-HHHHhcccee
Confidence 9999999999999999999764311 111111111 2225788899987766778887654 4332 2332221111
Q ss_pred cCccCCCCCcccccCCCcccccCCCCCCchHHHH----HHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEE-ecCC
Q 037144 332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV----VIRNFGVANLRNFIRSHVGMAKLFERLVTS-DKRFEV-AFPR 405 (502)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~----~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~~~~l-~~~~ 405 (502)
. +.-+|-..|++.-+ .+..+..+-++-. +.+.++.....|++ +|...+ +..|
T Consensus 278 s-------------------Lap~~~G~Aia~~mie~gdl~rlseqVIrPF---Y~~~~q~~~~~l~~~lp~~~~~iHkp 335 (417)
T COG3977 278 S-------------------LAPGRMGPAIAAEMIESGDLLRLSEQVIRPF---YRNRVQTTIAILRRYLPEYRCLIHKP 335 (417)
T ss_pred e-------------------ecCCCccHHHHHHHhhcchHHHHHHHhhhHH---HHHHHHHHHHHHHHhcCccceeeecC
Confidence 1 11111111211110 0111111111111 22222333333322 333332 3467
Q ss_pred CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE---------CCEEEEEE
Q 037144 406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV---------GGIYVLRF 476 (502)
Q Consensus 406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------~g~~~lR~ 476 (502)
+..++.|-.-.. +.-...+|+++|.++|.+++++..+ +...++|+
T Consensus 336 EGAIFlWLWf~d--------------------------LPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rm 389 (417)
T COG3977 336 EGAIFLWLWFKD--------------------------LPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRM 389 (417)
T ss_pred Ccceeehhhhcc--------------------------CCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEE
Confidence 777765533211 0111468899999999987776554 23569999
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHH
Q 037144 477 AAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 477 ~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
+.. -+++.|+.-++.|.+..+
T Consensus 390 n~~---~~~~~ie~Gva~lae~ve 410 (417)
T COG3977 390 NYV---PEPEKIEKGVAILAEEVE 410 (417)
T ss_pred ecC---CCHHHHHHHHHHHHHHHH
Confidence 875 356688888888876654
No 373
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.07 E-value=2e-07 Score=90.27 Aligned_cols=291 Identities=12% Similarity=0.013 Sum_probs=160.9
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCC----------
Q 037144 142 GGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKS---------- 210 (502)
Q Consensus 142 ~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~---------- 210 (502)
..+|++||||||-+||+.||... .. +.|-.....|-+-.-++.+.|+ ..+.-+.+..
T Consensus 111 ~vfF~nsGsEANelal~mar~Yt---------~~~diIa~r~~YHG~t~~t~glt~~---~~~k~~~~~~~~~~~~~~~P 178 (442)
T KOG1404|consen 111 VVFFVNSGSEANELALKMARLYT---------GNLDIIARRNSYHGNTLYTLGLTGL---SPWKQNFPGVASGVHHTMNP 178 (442)
T ss_pred EEEEecCCchHHHHHHHHHHHhc---------CCceEEEeeccccCCchhhcccccC---CcccccCCCCCCcccccCCC
Confidence 58999999999999999999863 22 3333444456555555565555 3332221100
Q ss_pred ----CCcccC-----H----HHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCEEEeecccc
Q 037144 211 ----SSYGLS-----A----ESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYA 273 (502)
Q Consensus 211 ----~~~~~d-----~----~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g 273 (502)
+-+.=+ - ++|+..|..... ..+...++..-....|.+.+ +++..++|+++|..++.|.++.
T Consensus 179 dp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~--~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqt 256 (442)
T KOG1404|consen 179 DPYRGIFGGSNEEEASDRYAKELEDLILYDGP--ETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQT 256 (442)
T ss_pred CcccccCCCCchhhhHHHHHHHHHHHHHhcCC--CceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhh
Confidence 000101 2 334444443322 22445555554445587865 8899999999999999999998
Q ss_pred cccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144 274 GSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT 353 (502)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 353 (502)
|+....--+..--.++ .-|.+|.. |.++.....|.+++..+ + .+.+.....|....
T Consensus 257 GfGRtG~~wgfe~h~v-~PDIvTmA--KgiGnG~Pl~AVvtt~E-I-a~v~~~~~~~fnTy------------------- 312 (442)
T KOG1404|consen 257 GFGRTGHMWGFESHGV-VPDIVTMA--KGIGNGFPLGAVVTTPE-I-ADVLNQKSSHFNTY------------------- 312 (442)
T ss_pred ccccccccccccccCC-CccHHHHH--hhccCCCcceeeecCHH-H-HHHHHhcccccccc-------------------
Confidence 8754431111001111 34666654 98987788888887544 2 23343333233221
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCCC--eeEEEEEeecCcchhhhhhcccCC
Q 037144 354 LCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFPRN--FSLVCFRVTPSAVMDKLRTKYKNG 430 (502)
Q Consensus 354 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~~~--~~~v~f~~~~~~~~~~~~~~~~~~ 430 (502)
.+.+..+....+.++.+-+ +++.++..+...||.+.|.++ .+.++++..+ .-++-..+.....+..|
T Consensus 313 ggnP~a~avg~aVL~Vike---e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~p------- 382 (442)
T KOG1404|consen 313 GGNPVACAVGLAVLKVIKE---ENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKP------- 382 (442)
T ss_pred CCCchhHHHHHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCC-------
Confidence 1112222222334444333 567778888999999999775 3456665433 12333333322100000
Q ss_pred CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144 431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV 495 (502)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l 495 (502)
-+ ......+-+...+.|.. +.-+.+.|. ++|++.- .-.|.+|||.+++..
T Consensus 383 --------p~----~~~~~~i~~~cke~Gvl-vg~g~i~G~-vfriaPP-lciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 383 --------PA----TAEGAVIGEQCKELGVL-VGKGGIHGN-VFRIAPP-LCITKEDIDFAVEYF 432 (442)
T ss_pred --------cc----hHHHHHHHHHHHHhCee-eecccccce-EEEecCC-eeccHHHHHHHHHHH
Confidence 01 12234555666666864 455556666 8999863 235667998887744
No 374
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.02 E-value=3.6e-07 Score=92.25 Aligned_cols=321 Identities=11% Similarity=0.063 Sum_probs=167.3
Q ss_pred HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHHHcCCC-
Q 037144 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQIVGID- 198 (502)
Q Consensus 121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~~~Glg- 198 (502)
+.+.|+++..-. .. ..++|++|||+|+-+|++.+++.+..+ |.. ++-+++. ....|-+-.-+..+.|..
T Consensus 92 LA~~L~~~aP~~-~l-----~~vFf~~sGSeAvEtAlKma~qY~~~~-G~p--~r~~~Isr~~gYHG~T~ga~Sv~g~~~ 162 (449)
T COG0161 92 LAEKLAELAPEG-GL-----DHVFFTDSGSEAVETALKMALQYWRAR-GQP--QRKKFISRRNGYHGDTLGAMSVGGPVA 162 (449)
T ss_pred HHHHHHHhCCCC-Cc-----cEEEEeCCchHHHHHHHHHHHHHHHhc-CCC--cceEEEEeccCcCcccchheeccCchh
Confidence 445667776411 01 258999999999999999999876543 221 1323333 333454444444444421
Q ss_pred ---------CCCEEEEecCC---CC-Ccc------cCHHHHHHHHHHHHhcCCccEEEEEec-CCccccccCC----hhH
Q 037144 199 ---------RKNIRAIKTTK---SS-SYG------LSAESVLSQINLDVEAELIPLFLCATV-GTTAITAVDP----LKP 254 (502)
Q Consensus 199 ---------~~~v~~v~~~~---~~-~~~------~d~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt~~G~idp----l~e 254 (502)
...+..+|... .. .+. -..++||+.|.+... .....+++-- .....|.+-| +++
T Consensus 163 ~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~--~~IAAfI~EPv~g~agG~~~pp~~Yl~~ 240 (449)
T COG0161 163 LRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGP--ETIAAFIVEPVVGGAGGMLVPPPGYLKR 240 (449)
T ss_pred hhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCc--ccEEEEEecccccccCCcccCChHHHHH
Confidence 11223343321 00 011 224556666654321 3344454443 2333566644 899
Q ss_pred HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCC-ccccc
Q 037144 255 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTN-PQYLK 332 (502)
Q Consensus 255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~-~~yl~ 332 (502)
+.+||++||+.|+.|..-.|+--...-+..--.++ .-|.++++ |.+... .+.|.+++.++- .+.+... ..-+.
T Consensus 241 vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi-~PDi~~~a--KGLT~GY~Pl~a~l~~~~I--~~~~~~~~~~~f~ 315 (449)
T COG0161 241 VREICDKYGILLIADEVATGFGRTGKMFACEHAGI-VPDILCLA--KGLTGGYLPLSAVLTSDRI--YEAFSDGDAGAFM 315 (449)
T ss_pred HHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCC-CCCeeeec--ccccccchhhHhHhhhHHH--HHHHhcccCCeec
Confidence 99999999999999998766543222111111122 57888877 777422 335666665442 2333222 11111
Q ss_pred CccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEecCC-CeeE-
Q 037144 333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS-DKRFEVAFPR-NFSL- 409 (502)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~~~~l~~~~-~~~~- 409 (502)
+. .+-...+++..+++..+..---+.++++..++..+|.+.|++ +++...+... ..++
T Consensus 316 HG-------------------~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli 376 (449)
T COG0161 316 HG-------------------HTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLI 376 (449)
T ss_pred cC-------------------CccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceE
Confidence 11 111123454445554432222234556666888888888886 4433344332 2333
Q ss_pred EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144 410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR 489 (502)
Q Consensus 410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~ 489 (502)
..+.+..+.-. . ... ..+...++.+...++|.+ +.+. |. .+=++. -+-.++++|+
T Consensus 377 ~~iElv~d~~t-----------------~-~~f-~~~~~~~~~~~~~e~Gl~-iRp~---g~-~i~~~P-Pliit~~eid 431 (449)
T COG0161 377 GAIELVADKAT-----------------K-TPF-EARVGARVRAAALERGLL-IRPL---GD-VIYLMP-PLIITREEID 431 (449)
T ss_pred EEEEEeccccc-----------------c-cch-hhhHHHHHHHHHHHCCeE-Eeec---CC-EEEEcC-CccCCHHHHH
Confidence 34444432100 0 000 134456777888888964 3332 22 333332 2346788999
Q ss_pred HHHHHHHHHHHh
Q 037144 490 AAWTVVQEHLEA 501 (502)
Q Consensus 490 ~~~~~l~~~~~~ 501 (502)
++++.+.+.+++
T Consensus 432 ~l~~~l~~al~~ 443 (449)
T COG0161 432 ELVDALREALDE 443 (449)
T ss_pred HHHHHHHHHHHH
Confidence 999999987763
No 375
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=98.93 E-value=8.2e-08 Score=87.91 Aligned_cols=277 Identities=11% Similarity=0.042 Sum_probs=158.0
Q ss_pred EEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHH
Q 037144 143 GVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLS 222 (502)
Q Consensus 143 g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~ 222 (502)
..+--|+-|.+-.-+.+.+.. ++..|+...+++.-+.-.|.+-++ .|+.+|.++ +|.|+.+++.+
T Consensus 89 ic~GvGsDE~ID~iiR~~c~P----------GkeKIl~cPPtysMY~v~A~iNd~---eVvkvpl~p--dF~lnvdai~e 153 (375)
T KOG0633|consen 89 ICVGVGSDELIDLIIRCVCDP----------GKEKILDCPPTYSMYVVDAAINDA---EVVKVPLNP--DFSLNVDAIAE 153 (375)
T ss_pred eEEecCcHHHHHHHHhheecC----------CccceeecCCcceeEEEEeecCCc---eEEEecCCC--CccccHHHHHH
Confidence 344344445554444444432 335666666665433334567788 999999987 69999999999
Q ss_pred HHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh-CCEEEeecccccccccCccchhhhcCCCCCCee-EEccC
Q 037144 223 QINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF-GIWVHVDAAYAGSACICPEFRHFIDGVECVDSF-SFNPH 300 (502)
Q Consensus 223 ~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~-g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi-~~~~h 300 (502)
.++.+.+ |.++.+|.+.|++|.+-..+.|-+|.+-- +..++||.||--+.-...... ++.- --..+ .-.++
T Consensus 154 vl~~ds~----iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~-lV~k--YpNLivlqTlS 226 (375)
T KOG0633|consen 154 VLELDSK----IKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMK-LVKK--YPNLIVLQTLS 226 (375)
T ss_pred HHhcccc----ceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccch-HhHh--CCceeehhhhh
Confidence 9877643 67999999999999997777777777643 688999999844432111111 1110 11122 23466
Q ss_pred CcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHH
Q 037144 301 KWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLR 376 (502)
Q Consensus 301 K~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~ 376 (502)
|.++ +....|+-+.. .....-.....++|--+. +.--+++.++ ..+.++
T Consensus 227 KsfGLAGiRvG~~~~~-~~ia~iln~~KaPYNiS~--------------------------~~s~~AL~Als~~n~kkme 279 (375)
T KOG0633|consen 227 KSFGLAGIRVGYGAFP-LSIAEILNRAKAPYNISV--------------------------AGSVAALAALSDSNGKKME 279 (375)
T ss_pred hhcCcceeEeeccccc-HHHHHHHHhccCCccccc--------------------------hhHHHHHHhcCcccchHHH
Confidence 7765 33334443332 122221223334442211 1112233333 223345
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeE-EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHH
Q 037144 377 NFIRSHVGMAKLFERLVTSDKRFE-VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESI 455 (502)
Q Consensus 377 ~~~~~~~~la~~l~~~l~~~~~~~-l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 455 (502)
...+...+-+.+|...|.++|++. .++....+++.+++.+.+ +...+.++.++
T Consensus 280 ~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~--------------------------n~~akkly~q~ 333 (375)
T KOG0633|consen 280 DVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGD--------------------------NGMAKKLYKQD 333 (375)
T ss_pred HHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCC--------------------------cHHHHHHHHHH
Confidence 555556666778888888887765 234556778877776432 33445555544
Q ss_pred H-hcCcEEEEeeeE-CCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 456 N-VSGKVFMTHAIV-GGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 456 ~-~~g~~~~~~~~~-~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
. +.|.++-..+.- .-.+++|++++ ++|+-+-+++.+++.
T Consensus 334 at~~gVvVRfrgse~~c~G~lRitvG----t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 334 ATKMGVVVRFRGSEEGCKGYLRITVG----TPEENTVLMKCLKQF 374 (375)
T ss_pred HHhcceEEEEcCCccccceeEEEEcC----CcccchHHHHHHHhh
Confidence 4 446543333222 23789999987 334667777776653
No 376
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.92 E-value=5.8e-07 Score=85.17 Aligned_cols=298 Identities=14% Similarity=0.158 Sum_probs=162.5
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH-------
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA------- 192 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa------- 192 (502)
+..+.+.++||++. .+=+.+|.||+-.|+..||.|.....+-...+..++.+-...|-...-+.
T Consensus 105 ~f~~~vt~lf~~~k---------vlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~d 175 (427)
T KOG1402|consen 105 EFAEYVTKLFGYDK---------VLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPD 175 (427)
T ss_pred HHHHHHHHhcCcce---------eeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcc
Confidence 34466788888864 44466779999999999998755432211111222222233342111110
Q ss_pred HHcCCCCC---CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCE
Q 037144 193 QIVGIDRK---NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIW 265 (502)
Q Consensus 193 ~~~Glg~~---~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~ 265 (502)
...|.|.- .+..||.+ |.++|+.+|+... ...+++.--....|.+-| |++..++|.+|+++
T Consensus 176 s~~~fgp~~P~~~~~v~Y~-------d~eale~~l~~~~-----vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl 243 (427)
T KOG1402|consen 176 SWDGFGPFLPGVVDKVPYG-------DAEALEVALKSPN-----VAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVL 243 (427)
T ss_pred hhhccCCCCCCcceeeccC-------CHHHHHHHhcCCC-----eeEEEeeccccccceEeCCchhHHHHHHHHHhhcEE
Confidence 12222211 25555543 8899999997632 112333333445677644 89999999999999
Q ss_pred EEeecccccccc----cCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCC
Q 037144 266 VHVDAAYAGSAC----ICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEP 340 (502)
Q Consensus 266 lhVDaA~g~~~~----~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 340 (502)
+++|..+.|... .+-++... +-|.+.+. |.+. +-++.+.++..+.-.+ .+ .+.- +..
T Consensus 244 ~I~DEvQTGl~RTGk~la~d~env-----~PDivilg--KalSGG~~Pvsavl~~~~im~--~~--~pge--Hgs----- 305 (427)
T KOG1402|consen 244 LIADEVQTGLARTGKLLACDYENV-----RPDIVILG--KALSGGVYPVSAVLADDDIML--NI--KPGE--HGS----- 305 (427)
T ss_pred EEehhhhhcccccCcEEEeehhhc-----CCCeEEEe--ccccCCeeeeEEEEecHHHHh--cc--CCCc--ccc-----
Confidence 999998877542 22223332 67888766 6663 3355666665433221 11 1110 000
Q ss_pred cccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eE-EecC--CCeeEEEEEeec
Q 037144 341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR-FE-VAFP--RNFSLVCFRVTP 416 (502)
Q Consensus 341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~-~~-l~~~--~~~~~v~f~~~~ 416 (502)
|. ++ ..|+...++..+..---+++.+++..+...|+.+|.+++. |. ++.. -..-+..+.+.+
T Consensus 306 ----------Ty-gg---NpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~ 371 (427)
T KOG1402|consen 306 ----------TY-GG---NPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINP 371 (427)
T ss_pred ----------cc-CC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEecc
Confidence 00 11 3444445555544444467888999999999999988642 10 0111 111222333333
Q ss_pred CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144 417 SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQ 496 (502)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~ 496 (502)
.... ..++ -.++-.+.+.|.+ .-+.+ + ..+||+.- ...+++|++..+++|.
T Consensus 372 ~~~~----------------------~~~a--w~~cl~lk~~g~L--AkptH-~-~IiRfaPP-L~I~e~dl~eg~e~i~ 422 (427)
T KOG1402|consen 372 SKTS----------------------GQDA--WDVCLALKENGLL--AKPTH-G-NIIRFAPP-LVISEEDLREGIEAIE 422 (427)
T ss_pred cccc----------------------chhH--HHHHHcccccccc--cCCCC-C-CeEEecCC-cccCHHHHHHHHHHHH
Confidence 2110 0111 2345555566753 22222 2 38999853 3467889999999998
Q ss_pred HHH
Q 037144 497 EHL 499 (502)
Q Consensus 497 ~~~ 499 (502)
+..
T Consensus 423 k~i 425 (427)
T KOG1402|consen 423 KTI 425 (427)
T ss_pred HHh
Confidence 765
No 377
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.92 E-value=3.6e-07 Score=85.61 Aligned_cols=338 Identities=13% Similarity=0.114 Sum_probs=199.9
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeC----CCCchhHHHHHH
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS----DQTHCAFQKAAQ 193 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s----~~~H~s~~~aa~ 193 (502)
..-+...++.+.|.... ++.+..+ -..|+..++..-. +.. ..+..|+.- ...||+++..++
T Consensus 113 De~il~l~~~iVGA~e~-------EvavmNs-LTvNlh~Ll~sFy---KPT----ekR~KILlE~kaFPSDhYAiesQ~~ 177 (465)
T KOG3846|consen 113 DEPILPLLAPIVGAQEN-------EVAVMNS-LTVNLHSLLISFY---KPT----EKRFKILLEKKAFPSDHYAIESQCK 177 (465)
T ss_pred chhhhhhhhhhccCCch-------hhhhHhh-hhhHHHHHHHHhc---CCc----chhhhhhhccCCCCchHHHHHhhhh
Confidence 34466778888888654 2333222 2345554443321 110 012223221 236999999999
Q ss_pred HcCCCCC-CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 194 IVGIDRK-NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 194 ~~Glg~~-~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
+-|+... .++.|...++ .-.+..+++-..|++ +|....+|+.+.....||..-++.+|...-+..|+++=-|-||
T Consensus 178 lhG~~~e~sm~~iePREG-EetlRteDILd~IEk---ngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAH 253 (465)
T KOG3846|consen 178 LHGISPENSMIQIEPREG-EETLRTEDILDTIEK---NGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAH 253 (465)
T ss_pred hcCCChHHheEEeccccc-ccchhHHHHHHHHHh---cCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhh
Confidence 9999533 4566666553 347888888777764 4556778888889999999999999996666779999999999
Q ss_pred ccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc--cCCCc
Q 037144 273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE--VGYKD 349 (502)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~--~~~~~ 349 (502)
+.+-.+..-+.+ ++|+.++...|+++ ++.|.|.+++-++.. .+.......|..+....+...... ...+.
T Consensus 254 AvgNVpL~LHdW------gVDFACWCSYKYlnaGaGgIgGlFvHekh~-~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa 326 (465)
T KOG3846|consen 254 AVGNVPLQLHDW------GVDFACWCSYKYLNAGAGGIGGLFVHEKHT-KESLPRLAGWWGHDPSKRFQMDNVLELIPGA 326 (465)
T ss_pred hhcCCceEEeec------CCceEEEeeecccccCCCccceeeeehhhh-cchhhHHhhhccCCcchhhhhccccccCccc
Confidence 877665533333 89999999999997 567788888865532 222222333433321110000011 11122
Q ss_pred ccccCCCCC--CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEe-ecCcchhhhhhc
Q 037144 350 WQITLCRRF--RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRV-TPSAVMDKLRTK 426 (502)
Q Consensus 350 ~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~-~~~~~~~~~~~~ 426 (502)
.++..|.+. ...++..+++.+.+-.+.++..+..-++.|+...++..-|..- +....-..|.+ .|...+
T Consensus 327 ~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~--~~rt~Kl~~~IiTP~~~~------ 398 (465)
T KOG3846|consen 327 LGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKH--PLRTEKLFFTIITPTSTD------ 398 (465)
T ss_pred cccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCc--hhhhcceeEEEeCCcccc------
Confidence 222223321 2246667788777777888899999999999888876543321 00000011111 111100
Q ss_pred ccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 427 YKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+.+-+..-. ....+..+..+|.++|.+. .-+...++|++....+++-.||.+++++|.++...
T Consensus 399 ------erGcQLsl~--Fssp~~~vfqeL~krGv~~----DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~ 461 (465)
T KOG3846|consen 399 ------ERGCQLSLY--FSSPTPKVFQELHKRGVIG----DKRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDK 461 (465)
T ss_pred ------cccceEEEE--eCCCchHHHHHHHHcCeec----cccCCCceEeecchhhccHHHHHHHHHHHHHHHHH
Confidence 000000000 0011356777788888542 22345689999887788889999999999988754
No 378
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.91 E-value=1.6e-06 Score=84.75 Aligned_cols=224 Identities=16% Similarity=0.058 Sum_probs=132.4
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC---C--CCcccC
Q 037144 142 GGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK---S--SSYGLS 216 (502)
Q Consensus 142 ~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~---~--~~~~~d 216 (502)
.++|..+||+||..||..||.....+.... +--+|..-...|---.-++...+. .-..+|.++ + .--.-|
T Consensus 118 rvff~nsGTeAne~ALK~Ark~~~~~~~~~--~t~~Iaf~nsyHG~tlgals~~~~---s~y~~~~~p~~p~v~~~~ynd 192 (433)
T KOG1401|consen 118 RVFFCNSGTEANETALKFARKFTGKKHPEK--KTKFIAFENSYHGRTLGALSVTGN---SKYGLPFDPIAPDVVTAEYND 192 (433)
T ss_pred EEEEecCCcHHHHHHHHHHHHhhcccCCcc--ceeEEEEecCcCCcchhHHHhhcc---cccCCCCCCCCCceeecccCC
Confidence 689999999999999999998654322111 112444455556433333333332 222222211 0 001237
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEecCCcccccc--CC--hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCC
Q 037144 217 AESVLSQINLDVEAELIPLFLCATVGTTAITAV--DP--LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECV 292 (502)
Q Consensus 217 ~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i--dp--l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~a 292 (502)
+.+|++.++.... . +..|++-...-.-|.+ +| +..|..+|+++|+.|+-|..+.|.....+.+.+-.-++ .-
T Consensus 193 ~t~l~k~~~~h~~--~-IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~-~P 268 (433)
T KOG1401|consen 193 STALEKLFESHKG--E-IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGV-TP 268 (433)
T ss_pred HHHHHHHHHhCCC--c-eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCc-CC
Confidence 9999999987542 1 4466666666555555 33 77899999999999999999988666555554433333 56
Q ss_pred CeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHH---HHHHHH
Q 037144 293 DSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKL---WVVIRN 369 (502)
Q Consensus 293 Dsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~ 369 (502)
|.+|+. |.|+...+.|...++++- .+.++...+ +.+..+ + ...+++. ..++..
T Consensus 269 DI~t~a--K~L~gGlPigA~~v~~kV--~~~i~~~~~-l~hg~T---------------f----~gnpLacsa~~~~l~~ 324 (433)
T KOG1401|consen 269 DITTVA--KPLGGGLPIGATGVRDKV--AEMISPGDH-LYHGGT---------------F----SGNPLACSAGIKVLDE 324 (433)
T ss_pred cceeeh--hhccCCceeEEEeehHHH--HhhcCCCCc-cccCcc---------------c----CCChhhhhHHHHHHHH
Confidence 888876 888777788999887663 234433322 222111 0 1133333 334444
Q ss_pred hc-HHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144 370 FG-VANLRNFIRSHVGMAKLFERLVTSDKR 398 (502)
Q Consensus 370 ~g-~~g~~~~~~~~~~la~~l~~~l~~~~~ 398 (502)
+. .+.+.+.-.....+++.+.+.+.+-+.
T Consensus 325 l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~ 354 (433)
T KOG1401|consen 325 LKDPETLKNVSKIGKELRKLLDEYLKKTPN 354 (433)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 43 344555556666777777777766543
No 379
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.87 E-value=6.9e-06 Score=90.42 Aligned_cols=234 Identities=12% Similarity=0.055 Sum_probs=123.7
Q ss_pred HHHHHHHHHHH--hcCCccEEEEEecC-CccccccCC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC
Q 037144 218 ESVLSQINLDV--EAELIPLFLCATVG-TTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 290 (502)
Q Consensus 218 ~~Le~~i~~~~--~~g~~p~~Vv~t~g-tt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~ 290 (502)
+.+++.|++.. ..+..+..|++.-. ....|.+-| +++|.++|++||+.|+.|..+.|+.-....+..-..++
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv- 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGC- 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCC-
Confidence 45666665321 12234555665542 334466633 88999999999999999999988754433222222234
Q ss_pred CCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCCc--ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHH
Q 037144 291 CVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTNP--QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVI 367 (502)
Q Consensus 291 ~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~~--~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l 367 (502)
..|.+++. |.+...+ +.|.+++++. +.+.|.... ..+.... |. .+.+..+....+++
T Consensus 646 ~PDIi~~g--KgLtgG~~Plaa~l~~~~--I~~~f~~~~~~~~~~hg~---------------Ty-~gnpl~cAaala~L 705 (817)
T PLN02974 646 KPDIACYA--KLLTGGLVPLAATLATEE--VFEAFRGPSKLDALLHGH---------------SY-TAHPMGCAAAAKAL 705 (817)
T ss_pred CCCEEeec--ccccCCCCccEEEEEcHH--HHHhhccccccCCcccCC---------------CC-CcCHHHHHHHHHHH
Confidence 58999877 8887663 6788887644 223442110 0011100 00 11122233334445
Q ss_pred HHhcHH-HHHHHHHHHHHHHHHHHHHH----hcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhH
Q 037144 368 RNFGVA-NLRNFIRSHVGMAKLFERLV----TSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEE 442 (502)
Q Consensus 368 ~~~g~~-g~~~~~~~~~~la~~l~~~l----~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (502)
+.+-.+ -+....++..++..++.+.| .+.|.+.=+. -...++.+.+..... + ...
T Consensus 706 ~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VR-g~Gl~~~iel~~~~~-----------------~--~~~ 765 (817)
T PLN02974 706 QWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVV-SLGTVLALELDAEGS-----------------G--SGY 765 (817)
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEE-eeeeEEEEEEecCCc-----------------c--ccc
Confidence 555332 22344455555555555444 3344332111 112344454433210 0 000
Q ss_pred hhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 443 RTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 443 ~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
.......+.+.+. ++|.+. .+. | .++|+.. .+.+++++++++++.|.+.+
T Consensus 766 -~~~~a~~v~~~~~~~~Gl~~-r~~---G-nvi~l~p-P~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 766 -SSLYARSVVRRLRREDGIYA-RPL---G-NVVYLMC-GPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred -chHHHHHHHHHHHHhCCEEE-Eec---C-CEEEEeC-CCCCCHHHHHHHHHHHHHHh
Confidence 0233456777777 778643 221 2 4788763 57788999999999998754
No 380
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.79 E-value=3e-07 Score=90.65 Aligned_cols=149 Identities=19% Similarity=0.155 Sum_probs=101.8
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEE----EeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCH
Q 037144 142 GGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVV----YSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSA 217 (502)
Q Consensus 142 ~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v----~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~ 217 (502)
.+++++..+.|++..+.+..+. ...++ .+. ..|+++...+++.|. .++.+... .+...
T Consensus 85 a~~ivnnn~aAVll~~~al~~~----------~EvVis~g~lV~-gg~~~v~d~~~~aG~---~l~EvG~t----n~t~~ 146 (395)
T COG1921 85 AAAIVNNNAAAVLLTLNALAEG----------KEVVVSRGELVE-GGAFRVPDIIRLAGA---KLVEVGTT----NRTHL 146 (395)
T ss_pred heeeECCcHHHHHHHHhhhccC----------CeEEEEcccccc-CCCCChhHHHHHcCC---EEEEeccc----CcCCH
Confidence 5788888777776555444321 11111 122 478999999999999 88887653 36799
Q ss_pred HHHHHHHHHHHhcCCccEEEEEecCCcccccc--CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCee
Q 037144 218 ESVLSQINLDVEAELIPLFLCATVGTTAITAV--DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSF 295 (502)
Q Consensus 218 ~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i--dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi 295 (502)
.+++.+|.+.++ ++.-++.++. |.. -++++++++|+++|+.++||.+-|.-.-.-+..+..++ .++|.+
T Consensus 147 ~d~~~AIne~ta------~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la--~GaDLV 217 (395)
T COG1921 147 KDYELAINENTA------LLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALA--LGADLV 217 (395)
T ss_pred HHHHHHhccCCe------eEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHh--cCCCEE
Confidence 999999998875 4444444433 333 46778999999999999999987654332223333332 289999
Q ss_pred EEccCCcCCCCCcceEEEeeCchh
Q 037144 296 SFNPHKWLFTTLDCCCLWVKDPSC 319 (502)
Q Consensus 296 ~~~~hK~l~~p~~~g~~~~r~~~~ 319 (502)
++|++|.|++|. .|++.-| +++
T Consensus 218 ~~SgdKllgGPq-aGii~Gk-Kel 239 (395)
T COG1921 218 SFSGDKLLGGPQ-AGIIVGK-KEL 239 (395)
T ss_pred EEecchhcCCCc-cceEech-HHH
Confidence 999999999996 6666554 444
No 381
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.78 E-value=4.2e-06 Score=81.54 Aligned_cols=279 Identities=13% Similarity=0.081 Sum_probs=167.1
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHH
Q 037144 142 GGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVL 221 (502)
Q Consensus 142 ~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le 221 (502)
.++=|.|||-|+-.+....... .++..|++|+++..-........|+ ++...|.-...+..+|.+.+-
T Consensus 96 ~t~Qt~GGTGAL~~~A~fl~~~---------~~~~~vwis~PtW~NH~~If~~aGl---~v~~Y~Yyd~~~~~~df~~ml 163 (396)
T COG1448 96 ATVQTLGGTGALRVAADFLARF---------FPDATVWISDPTWPNHKAIFEAAGL---EVETYPYYDAETKGLDFDGML 163 (396)
T ss_pred hheecCCcchHHHHHHHHHHHh---------CCCceEEeCCCCcHhHHHHHHhcCC---ceeeeeccccccccccHHHHH
Confidence 4566888998875554332222 1566799999998777777788999 999998754444568999998
Q ss_pred HHHHHHHhcCCccEEEEE-ecCCcccccc---CChhHHHHHHHHhCCEEEeecccccccccCccc----hhhhcCCCCCC
Q 037144 222 SQINLDVEAELIPLFLCA-TVGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEF----RHFIDGVECVD 293 (502)
Q Consensus 222 ~~i~~~~~~g~~p~~Vv~-t~gtt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~----~~~~~~~~~aD 293 (502)
+.|+...+.. +|++ .+.+|+||.- +..++|+++.++.|+.-.+|-||-|+.--.++. |...... .-=
T Consensus 164 a~L~~a~~~~----vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~-~~~ 238 (396)
T COG1448 164 ADLKTAPEGS----VVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVG-PEL 238 (396)
T ss_pred HHHHhCCCCC----EEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhC-CcE
Confidence 8887765432 3333 3478999964 457799999999999999999997765433322 1111111 114
Q ss_pred eeEEccCCcCCCC-CcceE--EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHH----
Q 037144 294 SFSFNPHKWLFTT-LDCCC--LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWV---- 365 (502)
Q Consensus 294 si~~~~hK~l~~p-~~~g~--~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~---- 365 (502)
.++.|+.|.|+.- -..|+ ++..+.+.....++.-..-+.... |.+ ....++-+
T Consensus 239 lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~y-------------------SnPP~~Ga~vva~IL~ 299 (396)
T COG1448 239 LVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNY-------------------SNPPAHGAAVVATILN 299 (396)
T ss_pred EEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhcc-------------------CCCchhhHHHHHHHhC
Confidence 6788899998632 12333 334454443333322211111110 000 01111111
Q ss_pred --HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-C--CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccch
Q 037144 366 --VIRNFGVANLRNFIRSHVGMAKLFERLVTSD-K--RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSE 440 (502)
Q Consensus 366 --~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~--~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (502)
.|+..-..-+..+.++..++++.|.+.|++. + .|..+ ..+.++++|. +-.
T Consensus 300 ~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i-~~Q~GMFsy~--Gls---------------------- 354 (396)
T COG1448 300 NPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFI-ISQRGMFSYT--GLS---------------------- 354 (396)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchH-hhcCceeecC--CCC----------------------
Confidence 2333334456778889999999999999872 2 35555 4456777764 211
Q ss_pred hHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 441 EERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 441 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
.+-.++|.++-.+++.. .| |++++.. ++..|+++.++|.++
T Consensus 355 --------~~QV~rLree~~IY~v~---sG----Ri~vaGl--~~~ni~~va~ai~~v 395 (396)
T COG1448 355 --------PEQVDRLREEFGIYLVA---SG----RINVAGL--NTSNIDYVAKAIAAV 395 (396)
T ss_pred --------HHHHHHHHHhccEEEec---CC----eeeeccC--ChhhHHHHHHHHHhh
Confidence 11233444444344332 22 8998754 455899999998765
No 382
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.73 E-value=3.5e-06 Score=84.43 Aligned_cols=188 Identities=13% Similarity=0.029 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
....++.+.|.++++-.. ...+|+.||++|+-.|+..+|.....+. ..+ +..++......|-...-+..+.
T Consensus 59 ~~~~~la~~L~~~~p~~~-------~~v~f~~sGseAve~Alkla~~~~~~~~-~~~-r~~il~~~~~yHG~t~~~~s~~ 129 (339)
T PF00202_consen 59 PEAAELAEKLAELFPGGL-------DRVFFANSGSEAVEAALKLARQYHNKRA-YTG-RRKILAFEGSYHGRTLGALSLT 129 (339)
T ss_dssp HHHHHHHHHHHHHSSTTE-------EEEEEESSHHHHHHHHHHHHHHHHHHTH-HHT-TTEEEEETTTB-TSSHHHHHHS
T ss_pred cchhhhhhhhhhcccccc-------ceeeeccCchHHHHHHHHHhhccccccc-ccC-CceEEEeeeeeeccCccccccc
Confidence 344556777888883322 2589999999999999999993211110 000 2334444545564333233322
Q ss_pred ---------CCCCCCEEEEecCCCCC---cccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc----CChhHHHHHH
Q 037144 196 ---------GIDRKNIRAIKTTKSSS---YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV----DPLKPLCDVA 259 (502)
Q Consensus 196 ---------Glg~~~v~~v~~~~~~~---~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i----dpl~eI~~i~ 259 (502)
+.....+..+|.+.... ..-..+.+++.+.+... ....+|++.-.....|.+ +=+++|.++|
T Consensus 130 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc 207 (339)
T PF00202_consen 130 GNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNA--DEIAAVIVEPIQGEGGMIPPPPEYLRELRELC 207 (339)
T ss_dssp SSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHG--GGEEEEEEESSBTTTTSBEE-TTHHHHHHHHH
T ss_pred CCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcC--CcEEEEEEeccccccCccccccchhhehcccc
Confidence 11123567777652100 00012224444443322 224566666655555655 2389999999
Q ss_pred HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc
Q 037144 260 KQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP 317 (502)
Q Consensus 260 ~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~ 317 (502)
++||+.+++|..+.|+.....-+.....++ ..|.++++ |.++.....|.++++++
T Consensus 208 ~~~gillI~DEV~tG~gRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~p~sav~~~~~ 262 (339)
T PF00202_consen 208 REHGILLIADEVQTGFGRTGKFFASEHYGV-DPDIVTFG--KGLGGGLPISAVLGSEE 262 (339)
T ss_dssp HHTT-EEEEEETTTTTTTTSSSSGHHHHTS-SSSEEEEE--GGGGTTSSEEEEEEEHH
T ss_pred cccccceecccccccccccCCccceecccc-cCcccccc--cchhhhhhcccccccch
Confidence 999999999999987644333222222344 67999997 99977688999988754
No 383
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.65 E-value=1.6e-05 Score=77.78 Aligned_cols=304 Identities=14% Similarity=0.127 Sum_probs=155.1
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC----ccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG----RENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~----~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
++++.+++++|.+.+ ..++.+++|. |++--..++.......+ |...++...+|+.+++-.....++.+
T Consensus 73 e~r~l~a~llgv~~~-------~viv~gNSSL-~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~ 144 (425)
T PF12897_consen 73 EARELFAELLGVPPE-------NVIVGGNSSL-NLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHF 144 (425)
T ss_dssp HHHHHHHHHHTS-GG-------GEEE-SS-HH-HHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHC
T ss_pred HHHHHHHHHhCCCHH-------HEEEeccchH-HHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhh
Confidence 355778999999876 4555544443 43333333333222211 22336788899999998889999999
Q ss_pred CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh-cCCccEEEEEecCCccccccCC---hhHHHHH-HHHhCCEEEeec
Q 037144 196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE-AELIPLFLCATVGTTAITAVDP---LKPLCDV-AKQFGIWVHVDA 270 (502)
Q Consensus 196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~-~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i-~~~~g~~lhVDa 270 (502)
|+ +++.||++++ ..|++.+|+.+.++.. +| +-++-.-+|++|..-. +++++.+ +...++.+.-|-
T Consensus 145 Gi---emi~VpM~~d---GPDmD~Ve~LV~~D~svKG----iWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDN 214 (425)
T PF12897_consen 145 GI---EMIPVPMTED---GPDMDMVEELVAEDPSVKG----IWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDN 214 (425)
T ss_dssp T----EEEEEEEETT---EE-HHHHHHHTHTSTTEEE----EEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-
T ss_pred Cc---EEEecCCCCC---CCCHHHHHHHHhcCCccce----EEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeec
Confidence 99 9999999864 4799999999976543 22 4555556889999843 4455554 235689999999
Q ss_pred ccccccccCccch----hhhc---CCCCCC--eeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144 271 AYAGSACICPEFR----HFID---GVECVD--SFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK 341 (502)
Q Consensus 271 A~g~~~~~~~~~~----~~~~---~~~~aD--si~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 341 (502)
||+...+..+..+ ..+. .....| .+..|.+|--+...|.+++..... .+.... . ++....
T Consensus 215 AY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~-Nl~~~~-~---~~~~~t------ 283 (425)
T PF12897_consen 215 AYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEA-NLAWIK-K---HLSVQT------ 283 (425)
T ss_dssp TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HH-HHHHHH-H---HHHHH-------
T ss_pred CceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHH-HHHHHH-H---HhcCce------
Confidence 9988877322111 1111 111233 556778998777666666655332 221110 0 010000
Q ss_pred ccccCCCcccccCCCCCCchHHHHHHHHhc-HH-HHHHHHHHHHHH--------HHHHHHHHh-cCCCeEEecCCCee-E
Q 037144 342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VA-NLRNFIRSHVGM--------AKLFERLVT-SDKRFEVAFPRNFS-L 409 (502)
Q Consensus 342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~-g~~~~~~~~~~l--------a~~l~~~l~-~~~~~~l~~~~~~~-~ 409 (502)
+ ...-+....-.+.++ .+ |++++++++.++ -+.|.+.|. .. ++--+..|..+ +
T Consensus 284 ---I-----------gpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~-~ia~Wt~P~GGYF 348 (425)
T PF12897_consen 284 ---I-----------GPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGL-GIASWTKPKGGYF 348 (425)
T ss_dssp ---S--------------HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGG-TSEEE---SBSS-
T ss_pred ---e-----------CccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCC-CeeEecCCCCceE
Confidence 0 001223333444443 45 777777766542 234444554 32 45556666544 6
Q ss_pred EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee--eE-----CCEEEEEEEecCCC
Q 037144 410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA--IV-----GGIYVLRFAAGNSM 482 (502)
Q Consensus 410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~-----~g~~~lR~~~~~~~ 482 (502)
|+|...+.. .+++.+...+.|.. +++. .+ .....||++.+.+
T Consensus 349 Isld~~~G~-----------------------------AkrvV~lakeAGV~-LT~AGAtfPyg~DP~D~nIRiAPS~P- 397 (425)
T PF12897_consen 349 ISLDVLDGT-----------------------------AKRVVELAKEAGVA-LTPAGATFPYGKDPRDSNIRIAPSYP- 397 (425)
T ss_dssp EEEEESTT------------------------------HHHHHHHHHHTTEE----TTTTSGGG--TTS-EEEE--SSS-
T ss_pred EEEecCCCh-----------------------------HHHHHHHHHHhCce-eCCCCCCCCCCCCCCCCcEEecCCCC-
Confidence 677765532 45667767777864 4442 11 1246899998654
Q ss_pred CcHHHHHHHHHHHHHHH
Q 037144 483 TMESHVRAAWTVVQEHL 499 (502)
Q Consensus 483 t~~~di~~~~~~l~~~~ 499 (502)
+.++++.+++.+.-+.
T Consensus 398 -~leel~~Am~~~~~cv 413 (425)
T PF12897_consen 398 -SLEELETAMDVFATCV 413 (425)
T ss_dssp --HHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHH
Confidence 6679999998876543
No 384
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.58 E-value=2.6e-05 Score=75.08 Aligned_cols=189 Identities=18% Similarity=0.223 Sum_probs=114.2
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144 106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH 185 (502)
Q Consensus 106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (502)
-.|..+...-.+... +.+.||+.-.. =.=++-|.|.++..+..-.. +..++.+..+.+..|
T Consensus 73 EAYagsrs~~~L~~a----vkdifGfq~~i-------PthQGRgAE~Il~~i~ik~~--------~~~pg~~~~~~sN~~ 133 (471)
T COG3033 73 EAYAGSRSYYALADA----VKDIFGFQYTI-------PTHQGRGAENILIPILIKKG--------EQEPGSKMVAFSNYH 133 (471)
T ss_pred hhhcccccHHHHHHH----HHHhcCceeee-------eccCCccHHHHHHHHHhhhc--------cccCCccccccccce
Confidence 356666666666655 55667764210 01122345666554432110 011444445555678
Q ss_pred hhHHHH-HHHcCCCCCCEEEEecCCCC--------CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc---cCChh
Q 037144 186 CAFQKA-AQIVGIDRKNIRAIKTTKSS--------SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA---VDPLK 253 (502)
Q Consensus 186 ~s~~~a-a~~~Glg~~~v~~v~~~~~~--------~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~---idpl~ 253 (502)
+-.-++ .+..|. .++-+++++.. .|.+|++.|++.|++... ...|.++.....++..|. ++.++
T Consensus 134 FdTTr~h~~~ng~---~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~-~nvp~I~~tiT~NsagGQpVSm~n~r 209 (471)
T COG3033 134 FDTTRGHIQINGA---TPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGA-DNVPYIVLTITNNSAGGQPVSMANMK 209 (471)
T ss_pred ecchhHHHHhcCC---ccccccccccccccccCCCCCccCHHHHHHHHHHhCc-ccCcEEEEEEeccccCCCcchHHhHH
Confidence 765554 345555 55555554311 368999999999987643 345654444444555554 47899
Q ss_pred HHHHHHHHhCCEEEeeccccc-ccccC----ccchhh-h-----cCCCCCCeeEEccCCcCCCCCcceEEEeeCch
Q 037144 254 PLCDVAKQFGIWVHVDAAYAG-SACIC----PEFRHF-I-----DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPS 318 (502)
Q Consensus 254 eI~~i~~~~g~~lhVDaA~g~-~~~~~----~~~~~~-~-----~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~ 318 (502)
++.+||++|++.++.|+|..+ .+.+. +.++++ . .-++-+|-++.|+-|=..++. .|+++++|+.
T Consensus 210 ~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnm-GGfl~~~D~~ 284 (471)
T COG3033 210 AVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNM-GGFLCFKDDS 284 (471)
T ss_pred HHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceecc-ccEEEecCcc
Confidence 999999999999999997533 22222 233322 1 124589999999999988875 5788888875
No 385
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=98.49 E-value=1.6e-06 Score=79.73 Aligned_cols=237 Identities=14% Similarity=0.084 Sum_probs=143.6
Q ss_pred hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCch-HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH
Q 037144 113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTC-EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA 191 (502)
Q Consensus 113 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt-~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 191 (502)
....+-.+.....-++.|+-.-. ..++++-+| +++-+.+...|.+. ++ .+.+|+ .....-|..|.
T Consensus 54 ll~~isne~a~~~i~l~glhav~------nc~vvpl~tgmslslc~~s~r~kr-pk------akyiiw-~ridqks~~ks 119 (432)
T KOG3843|consen 54 LLACISNEFAKDAIHLAGLHAVA------NCFVVPLATGMSLSLCFLSLRHKR-PK------AKYIIW-LRIDQKSCFKS 119 (432)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhh------ceeEEeccccccHHHHHHHHhhcC-Cc------ccEEEE-EecchHHHHHH
Confidence 34556666666677777763211 223333222 44545555555531 00 233443 45566677777
Q ss_pred HHHcCCCCCCEEEEe-cCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc---cCChhHHHHHHHHhCCEEE
Q 037144 192 AQIVGIDRKNIRAIK-TTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA---VDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 192 a~~~Glg~~~v~~v~-~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~---idpl~eI~~i~~~~g~~lh 267 (502)
.--.|. +.+.|. +.+.+....|++++++.+++... -+|...+.||+.-+ -|.+++|+.||..|++.-+
T Consensus 120 i~~agf---epiiie~i~d~d~l~tdleav~~~iee~g~-----dcilci~sttscfapr~pd~leaiaaica~~diphi 191 (432)
T KOG3843|consen 120 IIHAGF---EPIIIENILDGDELITDLEAVEAIIEELGE-----DCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHI 191 (432)
T ss_pred HHhcCC---CceeeeccccchHHHHhHHHHHHHHHHhCC-----ceEEEEeecccccCCCCCchHHHHHHHHHccCchhh
Confidence 666777 666664 33334577899999999987543 35555555555543 4889999999999999999
Q ss_pred eecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCC
Q 037144 268 VDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGY 347 (502)
Q Consensus 268 VDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 347 (502)
|.-|||...-.+-..-.......++|.++-+.-|.+++|.|..++..-+...++ .+ ...|-....
T Consensus 192 vnnayglqsee~i~~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq-~i--ak~ypgras------------ 256 (432)
T KOG3843|consen 192 VNNAYGLQSEECIHKIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQ-EI--AKMYPGRAS------------ 256 (432)
T ss_pred hccccccchHHHHHHHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHH-HH--HHhCCCccc------------
Confidence 999997653222110011122457899999999999999876665432221111 11 111221111
Q ss_pred CcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144 348 KDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS 395 (502)
Q Consensus 348 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~ 395 (502)
...++.+...+..+|..+|.+...+..++--+++..|.+
T Consensus 257 ---------a~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~ 295 (432)
T KOG3843|consen 257 ---------ASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIK 295 (432)
T ss_pred ---------cCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 013466777888889999998888888887777777643
No 386
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.32 E-value=5.8e-07 Score=88.01 Aligned_cols=161 Identities=16% Similarity=0.118 Sum_probs=37.6
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC------chhHHHHHH
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT------HCAFQKAAQ 193 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~------H~s~~~aa~ 193 (502)
.+.+.++.+.|..+ ++++++...|++.++.+... +-.|++|.-. .+.+....+
T Consensus 51 ~v~~ll~~ltgAea---------A~VvNnnaAAv~L~l~~la~------------~~EvIvsRGelVeiGgsFRip~vm~ 109 (367)
T PF03841_consen 51 HVEELLCELTGAEA---------ALVVNNNAAAVLLALNTLAK------------GKEVIVSRGELVEIGGSFRIPDVMR 109 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccc---------cccccccccccccccccccc------------ccccccccccccccccccccccccc
Confidence 35566788888764 56777766666665554322 1234445322 223555666
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc--cccc--CChhHHHHHHHHhCCEEEee
Q 037144 194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA--ITAV--DPLKPLCDVAKQFGIWVHVD 269 (502)
Q Consensus 194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~--~G~i--dpl~eI~~i~~~~g~~lhVD 269 (502)
..|. .++.|-+.. +..+++.+++|++++. ++.-.+.+|. .|-. -+++++++++++|++++++|
T Consensus 110 ~sGa---~lvEVGttN----~t~~~Dye~AI~e~Ta------~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~D 176 (367)
T PF03841_consen 110 QSGA---RLVEVGTTN----RTHLSDYEKAITENTA------ALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVD 176 (367)
T ss_dssp ----------------------------------------------------------------HHHHHHHHHT--EEEE
T ss_pred cccc---ccccccccc----cccccccccccccccc------ccccccccccccccccccccHHHHHHHHhhcCCcEEEE
Confidence 6777 888887641 6688999999999886 4555554444 2322 48999999999999999999
Q ss_pred cccccccc----cC---ccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc
Q 037144 270 AAYAGSAC----IC---PEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP 317 (502)
Q Consensus 270 aA~g~~~~----~~---~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~ 317 (502)
.+-|...= .. |..+..++ .++|.+++|+.|.+++|. +|+++-|..
T Consensus 177 lgsG~l~dl~~~gl~~Ep~v~~~~~--~GaDlV~fSGdKlLGGPQ-aGiI~Gkk~ 228 (367)
T PF03841_consen 177 LGSGLLVDLSPYGLPDEPTVQEYLA--AGADLVTFSGDKLLGGPQ-AGIIVGKKE 228 (367)
T ss_dssp -TTHHHHHHHTT----------CCC--CT-SEEEEETTSSSSS-S--EEEEEEHH
T ss_pred CCCCCCcCcccccCccccHHHHHhh--cCCCEEEEECCCcCCCCC-eEEEEeCHH
Confidence 87644321 01 11111111 379999999999999986 688877644
No 387
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.21 E-value=0.00065 Score=66.33 Aligned_cols=164 Identities=10% Similarity=0.072 Sum_probs=97.2
Q ss_pred HHHHHHHhcCCCCccCcCCCCcEEE---cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHHH--
Q 037144 121 VMDWLGQMLDLPKSFLFSGNGGGVI---QGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQI-- 194 (502)
Q Consensus 121 ~~~~l~~l~g~~~~~~~~~~~~g~~---t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~~-- 194 (502)
+-+-+++.||.++. ++ .-+||.|+-++|..... |++.++ ++...+-.+++..-+
T Consensus 59 le~iyA~vfgaE~A---------LVRpq~vSGTHAi~~~Lfg~Lr-----------pGD~ll~~tG~PYDTL~~VIG~~g 118 (403)
T PF06838_consen 59 LERIYADVFGAEDA---------LVRPQFVSGTHAIALALFGVLR-----------PGDELLSITGKPYDTLEEVIGIRG 118 (403)
T ss_dssp HHHHHHHHCT-SEE---------EEETTS-SHHHHHHHHHHHH-------------TT-EEEESSSS--CCHHHHHTSSS
T ss_pred HHHHHHHHhCchhh---------hhcccccchHHHHHHHHHhcCC-----------CCCeEEEcCCCchhhHHHHhCCCC
Confidence 33457899998753 22 23678888777766554 666665 455555567666533
Q ss_pred --------cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec--CC--ccccccCChhHHHHHHHHh
Q 037144 195 --------VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV--GT--TAITAVDPLKPLCDVAKQF 262 (502)
Q Consensus 195 --------~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~--gt--t~~G~idpl~eI~~i~~~~ 262 (502)
.|+ +...||+.+ ++.+|.+.++++|++.++ +|...- |. -..=.+++|+++.++.|+.
T Consensus 119 ~~~GSL~e~Gi---~Y~~v~L~~--dg~~D~~~i~~~~~~~tk------~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~ 187 (403)
T PF06838_consen 119 NGPGSLKEFGI---KYREVPLTE--DGTIDWEAIKKALKPNTK------MVLIQRSRGYSWRPSLTIEEIKEIIKFVKEI 187 (403)
T ss_dssp SSSSSTGGGT----EEEE--B-T--TSSB-HHHHHHHHHTTEE------EEEEE-S-TTSSS----HHHHHHHHHHHHHH
T ss_pred CCCCChHHhCc---eeEEEeecC--CCCcCHHHHHHhhccCce------EEEEecCCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 345 678888875 469999999999997654 555543 22 2333457788888888875
Q ss_pred --CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhh
Q 037144 263 --GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLL 321 (502)
Q Consensus 263 --g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~ 321 (502)
++++.||-|||-+.-.. +.-+. +||.+..|.-|..++. ..+|..++.+++...
T Consensus 188 ~p~~iifVDNCYGEFvE~~-EP~~v-----GADl~aGSLIKNpGGgiAptGGYIaGr~~lVe 243 (403)
T PF06838_consen 188 NPDVIIFVDNCYGEFVETQ-EPTEV-----GADLMAGSLIKNPGGGIAPTGGYIAGRKDLVE 243 (403)
T ss_dssp -TTSEEEEE-TTTTTTSSS--GGGG-----T-SEEEEETTSGGGTTT-SS-EEEEESHHHHH
T ss_pred CCCeEEEEeCCcceecccc-Ccccc-----chhheeccceeCCCCCccCcCCEEechHHHHH
Confidence 68999999997765433 22332 8999999999998632 346666666665543
No 388
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=98.19 E-value=0.00032 Score=65.59 Aligned_cols=338 Identities=13% Similarity=0.045 Sum_probs=184.8
Q ss_pred CHHHHHHHHHHhhcCCCCccc---c---cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHH
Q 037144 88 SVAGIVGEMLSSGFNVVGLDW---I---SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR 161 (502)
Q Consensus 88 ~~~~~~~~~l~~~~n~~~~~~---~---~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~ 161 (502)
.+-+++.++-...+|-++.+- + -+..+..+-......+++|+..|+.+ .--++++|||.. +.|+..-.
T Consensus 18 lp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~-----~vlf~QGGGt~q-FaAv~lNL 91 (370)
T KOG2790|consen 18 LPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNY-----KVLFLQGGGTGQ-FAAVPLNL 91 (370)
T ss_pred CCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCce-----eEEEEeCCCccc-ccccchhh
Confidence 344556666666666654332 2 23456677778899999999999886 123456666643 23322211
Q ss_pred HHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCC-cccCHHHHHHHHHHHHhcCCccEEEEEe
Q 037144 162 DRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSS-YGLSAESVLSQINLDVEAELIPLFLCAT 240 (502)
Q Consensus 162 ~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~-~~~d~~~Le~~i~~~~~~g~~p~~Vv~t 240 (502)
-. .+.|..-+-|++..-+--+.+.|.++.-. +.+..+..+..- -..|.+.++.-.+ . .+|..+
T Consensus 92 ~g-----lK~g~~AdYiVTGsWS~KA~~EAkk~~~~---~~V~~~~k~y~ygkvPd~~~w~~~~d--a------~yvyyC 155 (370)
T KOG2790|consen 92 IG-----LKHGRCADYVVTGSWSAKAAEEAKKYGTP---NIVIPKLKSYTYGKVPDPSTWELNPD--A------SYVYYC 155 (370)
T ss_pred hc-----cccCCccceEEeccccHHHHHHHHhhCCc---eEEeccccccccCcCCChhhcccCCC--c------cEEEEe
Confidence 10 11222334555554333445555444333 444444432110 1245555543221 1 278888
Q ss_pred cCCcccccc-CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchh
Q 037144 241 VGTTAITAV-DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSC 319 (502)
Q Consensus 241 ~gtt~~G~i-dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~ 319 (502)
...|..|.- +++. +-.-.|..++.|-+.--..-+. .+...+.|...++|..+ |.|..++++|+.-+
T Consensus 156 aNETVHGVEf~~~P----~~~~~~~vlVaDmSSnflSrpv--------Dvsk~gvi~aGAQKN~G-~aG~Tvvivr~dll 222 (370)
T KOG2790|consen 156 ANETVHGVEFDFIP----VNDPKGAVLVADMSSNFLSRPV--------DVSKFGVIFAGAQKNVG-PAGVTVVIVRKDLL 222 (370)
T ss_pred cCceeeceecCCCC----CCCCCCceEEEecccchhcCCc--------cchhcceEEeccccccC-ccccEEEEEehhhh
Confidence 899999984 5444 1233577888886432222222 23366789999999985 66788888886532
Q ss_pred hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144 320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKR 398 (502)
Q Consensus 320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~ 398 (502)
.......|.-+.-...+. ....++ |+++ |....+-+.++.+ ..-|+.++.+...+.++.+.+.|.+..|
T Consensus 223 -g~~~~~tP~v~dyk~~~~--NnSlyN----TpP~---f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~g 292 (370)
T KOG2790|consen 223 -GNALDITPSVLDYKIMDK--NNSLYN----TPPC---FGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNG 292 (370)
T ss_pred -cccccCCccccceeeecc--cccccc----CCCe---eeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 222222222221111000 000000 1111 1222233445444 2345677777788899999999999878
Q ss_pred eEEec-CC---CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEE
Q 037144 399 FEVAF-PR---NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVL 474 (502)
Q Consensus 399 ~~l~~-~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~l 474 (502)
|-... +| ....|+||+.++ ++-.++.++-.+++.+-+.+ ++..+.+
T Consensus 293 fy~cpVe~~~RS~MNV~Fri~~d----------------------------~Le~eFLkeA~~~~mv~LKG--hRSVGGi 342 (370)
T KOG2790|consen 293 FYRCPVEPSVRSRMNVPFRIEKD----------------------------ELEAEFLKEAAKEHMVQLKG--HRSVGGI 342 (370)
T ss_pred eEEcccchhhhhhcccceeecch----------------------------HHHHHHHHHHHHhhhhcccc--ccccccc
Confidence 86542 22 234689999764 23345555554555432222 3446679
Q ss_pred EEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 475 RFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 475 R~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
|.|+=|. .+-++++++++-+++..+.
T Consensus 343 RASlYNA-isv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 343 RASLYNA-ISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred hhhhhcc-ccHHHHHHHHHHHHHHHHh
Confidence 9998665 4556999999999887653
No 389
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.99 E-value=0.0033 Score=65.23 Aligned_cols=364 Identities=13% Similarity=0.115 Sum_probs=182.7
Q ss_pred chhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHh--hcC---CCCcccccCh
Q 037144 38 PGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSS--GFN---VVGLDWISSP 112 (502)
Q Consensus 38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~--~~n---~~~~~~~~~p 112 (502)
|.-++..-+..+| .|....+.++++.....++- -|.+=-=+||++. ..++.+...++.+ ++. ++...-+.+.
T Consensus 85 P~~Ir~~~~l~~~-~~~~E~eml~~l~~ia~kNk-~~ksfIGmGYyn~-~vP~~I~RNilenp~W~TqYTPYQ~EIsQGR 161 (1001)
T KOG2040|consen 85 PKSIRLKRPLKMD-KPLCESEMLQHLEDIASKNK-IWKSFIGMGYYNT-HVPAVILRNILENPGWYTQYTPYQAEISQGR 161 (1001)
T ss_pred chhhcccchhcCC-CCcCHHHHHHHHHHHHhhhh-HHHHhhccccccc-cCcHHHHHHhhhCCcceeccCCCchhhhhhh
Confidence 3344444444453 47888999999987654443 3433222455543 3334444444432 111 1111112222
Q ss_pred hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH
Q 037144 113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA 192 (502)
Q Consensus 113 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa 192 (502)
.-+.+-.+ ..++++.|+|-.. ..+.--||.|--...++.+.. ++-..+++...|+-....+
T Consensus 162 LEsllNyQ--Tmi~dlTGL~~aN-------ASLLDEgTAaaEAm~l~~~~~----------krkk~vvd~~~hpqtlsV~ 222 (1001)
T KOG2040|consen 162 LESLLNYQ--TMITDLTGLPMAN-------ASLLDEGTAAAEAMALCNRIN----------KRKKFVVDSNCHPQTLSVV 222 (1001)
T ss_pred HHHHhhhH--HhhhhccCCcccc-------hhhhccchhHHHHHHHHHhhc----------ccceEEecCCCCcchhhhh
Confidence 22222223 5688999998542 222223343332111222221 2334778888997443333
Q ss_pred ----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144 193 ----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 193 ----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV 268 (502)
.-+|+ .+... |+++...- .+...-|++..+. ..|.+.|.+++++.+++.|..+++
T Consensus 223 ~TRa~~~~i---~v~~~----------~~~~~~~s-------~~~v~gvlvQYP~-t~G~i~d~~el~~~a~~~~s~vv~ 281 (1001)
T KOG2040|consen 223 KTRAKGFGI---KVVVS----------DIKEADYS-------SKDVSGVLVQYPD-TEGSVLDFDELVELAHANGSLVVM 281 (1001)
T ss_pred hccccccce---eEEec----------CHHHhhcc-------ccceeEEEEEcCC-CCCcccCHHHHHHHhhccCceEEE
Confidence 33344 32222 22111111 1112345666655 468999999999999999887655
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcce-----EEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCC-----CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g-----~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
-.-.-+..++-|. .+. +||....+.+.+ ++|.|-| ++.+++. + ....|..+-.-..+ ..+
T Consensus 282 atDLLaLtiLrpP-gef-----GaDIavGSsQRF-GVPlGYGGPHAaFfAv~~~--l---~R~mPGRiiGvtkD---~~g 346 (1001)
T KOG2040|consen 282 ATDLLALTILRPP-GEF-----GADIAVGSSQRF-GVPLGYGGPHAAFFAVSES--L---VRMMPGRIIGVTKD---ALG 346 (1001)
T ss_pred eehhhHHHccCCh-hhc-----Cceeeecccccc-CccccCCCchHHHHHHHHH--H---HhhCCCceEeeeec---ccc
Confidence 2211111111121 222 899999988875 4665544 3444321 1 12223333221111 000
Q ss_pred ccCCCccccc----CCCCCC-------chHHHH---HHH--HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 037144 344 EVGYKDWQIT----LCRRFR-------SLKLWV---VIR--NFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNF 407 (502)
Q Consensus 344 ~~~~~~~~~~----~sr~~~-------al~~~~---~l~--~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~ 407 (502)
...+ ...+| --||-. |-++.+ ++. ++|.+|++++.++....+-.|...|+.. |-+++..+-+
T Consensus 347 k~a~-RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~~k~fF 424 (1001)
T KOG2040|consen 347 KEAY-RLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQHKPFF 424 (1001)
T ss_pred cHHH-HHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhcccccc
Confidence 0000 00111 123311 112222 221 2499999999999999999999999987 6888877766
Q ss_pred eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144 408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH 487 (502)
Q Consensus 408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d 487 (502)
-++.++.... .+++.++..++++-+ ..+ ..+.+-+++- ..++++|
T Consensus 425 DTLkI~~~~s------------------------------~~~~l~rA~~~~iNl---r~~-ed~tigvslD-ETv~~~D 469 (1001)
T KOG2040|consen 425 DTLKIRCGCS------------------------------AEEVLDRAAKRQINL---RLV-EDGTIGVSLD-ETVTEKD 469 (1001)
T ss_pred ceEEEEecCc------------------------------HHHHHHHHHhhcCce---EEe-ecCceEEeec-ccccHHH
Confidence 6666666431 223444443334211 111 1234666763 4577789
Q ss_pred HHHHHHHHH
Q 037144 488 VRAAWTVVQ 496 (502)
Q Consensus 488 i~~~~~~l~ 496 (502)
++.++..+.
T Consensus 470 vddLl~vf~ 478 (1001)
T KOG2040|consen 470 VDDLLWVFN 478 (1001)
T ss_pred HHHHHHHHc
Confidence 999998775
No 390
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.59 E-value=0.013 Score=55.42 Aligned_cols=301 Identities=12% Similarity=0.035 Sum_probs=158.1
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH------cCCCCCC---EEEEecCC--C
Q 037144 142 GGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI------VGIDRKN---IRAIKTTK--S 210 (502)
Q Consensus 142 ~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~------~Glg~~~---v~~v~~~~--~ 210 (502)
..+|+.+|||||-+|+..||+... ..++|......|--+....++ -|-|..+ |+.-|+.+ .
T Consensus 104 vc~F~NSGSEANDLALRLAR~ftk--------hqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyr 175 (452)
T KOG1403|consen 104 VCFFVNSGSEANDLALRLARNFTK--------HQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYR 175 (452)
T ss_pred EEEEecCCchhhHHHHHHHHhhcc--------cCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccc
Confidence 579999999999999999998531 345555554444222211111 1222222 33334421 0
Q ss_pred CC-----------cccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCEEEeecccccc
Q 037144 211 SS-----------YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGS 275 (502)
Q Consensus 211 ~~-----------~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g~~ 275 (502)
+. +..-.+.+++.+++...+|......++.+-.+--|.+-| ++++++..+.+|-.++.|..+-|+
T Consensus 176 GK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGF 255 (452)
T KOG1403|consen 176 GKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGF 255 (452)
T ss_pred cccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcc
Confidence 11 123346677888777666665544455444455566644 678888888899999999998776
Q ss_pred cccCccchh-hhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccCCCccccc
Q 037144 276 ACICPEFRH-FIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVGYKDWQIT 353 (502)
Q Consensus 276 ~~~~~~~~~-~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~ 353 (502)
......+.. .+-++ -.|.++.. |-++...+.+++..+.+ +.++|.. ...|+...
T Consensus 256 GRvG~hyWafq~y~f-iPDIVtmg--KpmGNGhPVa~Vattke--IA~Af~atgv~YFNTy------------------- 311 (452)
T KOG1403|consen 256 GRVGSHYWAFQTYNF-IPDIVTMG--KPMGNGHPVAAVATTKE--IAQAFHATGVEYFNTY------------------- 311 (452)
T ss_pred cccchhhhhhhhhcc-ccchheec--ccCCCCCeeeEEeccHH--HHHHhccccceehhcc-------------------
Confidence 544332211 11111 35667654 66665556677665433 2345543 44565432
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCCC-eeE-EEEEeecCcchhhhhhcccCC
Q 037144 354 LCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-KRFEVAFPRN-FSL-VCFRVTPSAVMDKLRTKYKNG 430 (502)
Q Consensus 354 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~~~~l~~~~~-~~~-v~f~~~~~~~~~~~~~~~~~~ 430 (502)
++.+.......+.++....+ ++.++..++.++|...|++. -..++++..+ .++ +-+.+..+.. .+
T Consensus 312 GGnPVsCAv~laVm~v~e~E---~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~---------tR 379 (452)
T KOG1403|consen 312 GGNPVSCAVGLAVMRVCEDE---NLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRK---------TR 379 (452)
T ss_pred CCCchhHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccc---------cC
Confidence 12232333334455544444 44455566666666666543 1456665433 222 2222222110 01
Q ss_pred CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
.++ .+....+..+|.+...+.++... ..+.+|.+-.--- -++++++.++..|.+++
T Consensus 380 tP~-----------tk~A~~~v~rlke~y~VLlsaDG-Ph~NilKiKPPmC-Fneena~e~v~~ld~iL 435 (452)
T KOG1403|consen 380 TPD-----------TKEAHWVVNRLKELYRVLLSADG-PHRNILKIKPPMC-FNEENADEFVLGLDEIL 435 (452)
T ss_pred CCc-----------HHHHHHHHHHHHHhhhEEEecCC-CCCceeecCCCcc-cChhhHHHHHHHHHHHH
Confidence 111 12244566667666655554321 2345666543101 24557777777776654
No 391
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.39 E-value=0.012 Score=57.15 Aligned_cols=220 Identities=14% Similarity=0.137 Sum_probs=117.8
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEec----CCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC-C
Q 037144 216 SAESVLSQINLDVEAELIPLFLCATV----GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV-E 290 (502)
Q Consensus 216 d~~~Le~~i~~~~~~g~~p~~Vv~t~----gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~-~ 290 (502)
-++++|+.|.+-.++......+++.- |.-..++-|-+..|.+||++||+-++||.++.|+..-..-|.+---++ .
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 46678888887765544334444433 344445557799999999999999999999876644333222211111 2
Q ss_pred CCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCccc-ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHH
Q 037144 291 CVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQY-LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRN 369 (502)
Q Consensus 291 ~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~y-l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~ 369 (502)
-.|.+|++ |-|. +|.++.. . .|..+.+| +++. | ++-++..+-+-..++.
T Consensus 334 PpD~vTFS--KK~q----~gGffh~-~-----~frpn~pYrifNT---------------W---mGdP~k~lll~~vv~~ 383 (484)
T KOG1405|consen 334 PPDVVTFS--KKFQ----TGGFFHD-E-----EFRPNEPYRIFNT---------------W---MGDPSKNLLLEEVVQE 383 (484)
T ss_pred Cccceehh--hhhh----cCccccC-c-----ccCCCchHHHhhh---------------h---cCChHHHHHHHHHHHH
Confidence 47888876 4443 2223321 1 22233333 2211 1 2323344444445554
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhH
Q 037144 370 FGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTN 445 (502)
Q Consensus 370 ~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (502)
+.++ .++++.....++|..+|.+ .|+.---..-+..++.|..+. .
T Consensus 384 I~~~---~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps----------------------------~ 432 (484)
T KOG1405|consen 384 IKRE---DLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPS----------------------------G 432 (484)
T ss_pred HhHH---HHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCC----------------------------h
Confidence 4444 3455555666667666643 343210001133344554433 2
Q ss_pred HHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 446 EFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 446 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.....+...+...|.. +.+ -|...+|+-.+-. -++.+.+-+++.+.++...
T Consensus 433 ~~Rdk~i~~~~~nGv~-~GG---Cg~~siRfRPsLv-f~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 433 SIRDKLILIARLNGVN-LGG---CGDKSIRFRPSLV-FRKHHADIFLDIFDKILAG 483 (484)
T ss_pred HHHHHHHHHHHHcCce-ecc---cccceeeecccee-ehhhhHHHHHHHHHHHhcc
Confidence 2344667777777753 222 2445677655422 3556899999999888764
No 392
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.34 E-value=0.048 Score=52.11 Aligned_cols=281 Identities=15% Similarity=0.181 Sum_probs=153.2
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHH
Q 037144 142 GGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVL 221 (502)
Q Consensus 142 ~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le 221 (502)
.|+=+-|||-|+..+..-. ..++ .+-.||+|.+.........+..|.- .+...+.=..++-.+|.+.+-
T Consensus 101 ~~vQslsGTGAl~~~A~Fl-~~~~--------~~~~VY~SnPTW~nH~~if~~aGf~--tv~~Y~yWd~~~k~~d~e~~L 169 (410)
T KOG1412|consen 101 FGVQSLSGTGALRIAADFL-ATFY--------NKNTVYVSNPTWENHHAIFEKAGFT--TVATYPYWDAENKCVDLEGFL 169 (410)
T ss_pred cceeeccccchhhhhHHHH-HHhc--------ccceeEecCCchhHHHHHHHHcCCc--eeeeeeeecCCCceecHHHHH
Confidence 4666677887775543322 1222 3456999999877777777777741 444444422234578888888
Q ss_pred HHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCEEEeecccccccccCcc---c--hhhhc-CCCC
Q 037144 222 SQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPE---F--RHFID-GVEC 291 (502)
Q Consensus 222 ~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~---~--~~~~~-~~~~ 291 (502)
..|+...... ++|.-.+..|+|| +|| ..+|+++.++.++...-|-||-|++.--+. + +..+. |++
T Consensus 170 sdl~~APe~s---i~iLhaCAhNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e- 244 (410)
T KOG1412|consen 170 SDLESAPEGS---IIILHACAHNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFE- 244 (410)
T ss_pred HHHhhCCCCc---EEeeeccccCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCe-
Confidence 8777655321 2233333578887 566 557899999999999999999887643222 1 11111 211
Q ss_pred CCeeEEccCCcCCC--C-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC--CCchHHHHH
Q 037144 292 VDSFSFNPHKWLFT--T-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR--FRSLKLWVV 366 (502)
Q Consensus 292 aDsi~~~~hK~l~~--p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~--~~al~~~~~ 366 (502)
=+++-++.|.++. + .||--+.++++.......+...--+... .|.+ ++|--+...
T Consensus 245 -~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~-------------------~SNPPAyGArIV~kv 304 (410)
T KOG1412|consen 245 -LFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSN-------------------WSNPPAYGARIVHKV 304 (410)
T ss_pred -EEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhc-------------------cCCCcchhhHHHHHH
Confidence 2567778898763 2 2333345566543222111111011100 0000 011111111
Q ss_pred H-----HHhcHHHHHHHHHHHHHHHHHHHHHHhcC--CC-eEEecCCCeeEEEEEeecCcchhhhhhcccCCCccccccc
Q 037144 367 I-----RNFGVANLRNFIRSHVGMAKLFERLVTSD--KR-FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQF 438 (502)
Q Consensus 367 l-----~~~g~~g~~~~~~~~~~la~~l~~~l~~~--~~-~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (502)
| +.--...+..+-.|..+++..|++.|..+ || +.-+ ..+.++++|.=.
T Consensus 305 L~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI-~~QiGMFSyTGL----------------------- 360 (410)
T KOG1412|consen 305 LSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHI-TQQIGMFSYTGL----------------------- 360 (410)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH-HhhccceeecCC-----------------------
Confidence 1 11112345667778888999999998775 22 1111 135667666321
Q ss_pred chhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 439 SEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 439 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
+..-.+.|.++..+++... | |++++..++ ..+|+...+|.+..+
T Consensus 361 ---------tp~qV~~li~~h~vyLl~~---G----RInisGLN~--~NveyVAkAIde~Vr 404 (410)
T KOG1412|consen 361 ---------TPAQVDHLIENHKVYLLSD---G----RINISGLNM--KNVEYVAKAIDETVR 404 (410)
T ss_pred ---------CHHHHHHHHHhceEEEecC---C----cEeeecccc--ccHHHHHHHHHHHHH
Confidence 2234566777777765542 2 677765433 367777777766654
No 393
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=96.84 E-value=0.028 Score=54.72 Aligned_cols=293 Identities=14% Similarity=0.098 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
.+||+++ +.|-++.|--... +.-++.+.|+.-++.|..-|+... .....+...|+.+.+.++++....++
T Consensus 46 ~eL~~~I-r~LH~~VGNAvt~-----gr~IV~GtGsTQL~~AalyALSp~----~~~~~~p~~VVa~aPYY~~Y~~qt~~ 115 (363)
T PF04864_consen 46 PELERQI-RRLHRVVGNAVTD-----GRYIVFGTGSTQLFNAALYALSPN----ASPSSSPASVVAAAPYYSSYPEQTDF 115 (363)
T ss_dssp HHHHHHH-HHHHHHH-SB--T-----TSEEEEECHHHHHHHHHHHHHCHH----T-TTSSSEEEEE-SS--CHHHHHCCC
T ss_pred HHHHHHH-HHHHHHhcccccc-----CcEEEEcCCHHHHHHHHHHhcCCC----CCCCCCCceeEecCCCccchHHHHHh
Confidence 4566543 4455555532211 123444444544555555444321 01111444555554444444445455
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144 195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 274 (502)
Q Consensus 195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~ 274 (502)
+.- ..-...-|.. .+. .. ....+++=++|.|+|+.|.+-. .+++.-+..++-|=||-.
T Consensus 116 f~s---~~y~w~Gda~-~~~----------~~---~~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYYW 173 (363)
T PF04864_consen 116 FDS---RLYKWAGDAS-NFK----------NS---DNPSPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYYW 173 (363)
T ss_dssp T-B---TTEEEEEECC-CGT----------T----S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-S
T ss_pred ccc---cCccccccHH-hhc----------cC---CCCCCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeeec
Confidence 544 3344444331 121 11 1134678889999999997731 123444566788988754
Q ss_pred ccc-cCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc
Q 037144 275 SAC-ICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI 352 (502)
Q Consensus 275 ~~~-~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~ 352 (502)
..+ +++. -..-|.+-++.+|.=+ +....|+.++||++..+.. ..|+... ++
T Consensus 174 PhyTpI~~-------~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM----~~y~~ln----------------Ti 226 (363)
T PF04864_consen 174 PHYTPITA-------PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKM----TKYMELN----------------TI 226 (363)
T ss_dssp TTTS---S--------B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHH----HHHHHHH----------------CS
T ss_pred ccccccCC-------CCCCceEEEEEecccCccccccceeeecCHHHHHHH----HHHHHHh----------------cc
Confidence 332 2221 1256889999999754 5567899999998765432 2454322 12
Q ss_pred cCCCC--CCchHHHHHHHH-hcHH-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCC-----------ee-EEE
Q 037144 353 TLCRR--FRSLKLWVVIRN-FGVA-----NLRNFIRSHVGMAKLFERLVTSDKRFEVAF-PRN-----------FS-LVC 411 (502)
Q Consensus 353 ~~sr~--~~al~~~~~l~~-~g~~-----g~~~~~~~~~~la~~l~~~l~~~~~~~l~~-~~~-----------~~-~v~ 411 (502)
..||- .+++++..++.. ++.+ -+.=-.+...+.-++|++.+.+...|.+.. +|+ .+ .-.
T Consensus 227 GvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAW 306 (363)
T PF04864_consen 227 GVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAW 306 (363)
T ss_dssp S--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEE
T ss_pred cCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEE
Confidence 22321 355555544332 2221 111122334445566777787777788753 121 11 222
Q ss_pred EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-CEEEEEEEecCCCCcHHHHHH
Q 037144 412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG-GIYVLRFAAGNSMTMESHVRA 490 (502)
Q Consensus 412 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~ 490 (502)
++....+ ++.+.++ |.+.|++--++..++ +..++|+|+. -++++.+.
T Consensus 307 lkCe~ee--------------------------d~DC~~~---l~~~~I~tr~G~~fga~~ryVRlSml---~~~d~Fd~ 354 (363)
T PF04864_consen 307 LKCEREE--------------------------DEDCYAV---LREAKIITRSGVLFGADSRYVRLSML---KRDDDFDQ 354 (363)
T ss_dssp EEESSCG--------------------------GSSHHHH---HHCTTEEEEEGGGGTS-TTEEEEESS---S-HHHHHH
T ss_pred EecCCcc--------------------------cccHHHH---HHhCCcccCCCCccCCCCCeEEEecc---CCHHHHHH
Confidence 2222111 1113332 333354333333333 3569999986 46779999
Q ss_pred HHHHHHHH
Q 037144 491 AWTVVQEH 498 (502)
Q Consensus 491 ~~~~l~~~ 498 (502)
+++.|..+
T Consensus 355 l~~rL~~l 362 (363)
T PF04864_consen 355 LLERLSKL 362 (363)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHhh
Confidence 99988754
No 394
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=96.47 E-value=0.024 Score=53.80 Aligned_cols=147 Identities=14% Similarity=0.136 Sum_probs=93.4
Q ss_pred HHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeE-EEeCCCCchhHHHHHHH--------
Q 037144 124 WLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLV-VYSSDQTHCAFQKAAQI-------- 194 (502)
Q Consensus 124 ~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~-v~~s~~~H~s~~~aa~~-------- 194 (502)
-.++.||.+.... .--|. +||.|+-+||.-... |++. +++....+-..+....+
T Consensus 73 vyA~vf~aE~a~V-----Rpq~i-sGTHAI~~aLfg~LR-----------pgDell~i~G~PYDTLeevIG~rg~~~gSL 135 (416)
T COG4100 73 VYAQVFGAEAALV-----RPQII-SGTHAIACALFGILR-----------PGDELLYITGSPYDTLEEVIGLRGEGQGSL 135 (416)
T ss_pred HHHHHhcccccee-----eeeee-cchhHHHHHHHhccC-----------CCCeEEEecCCcchhHHHHhccCCCCcccH
Confidence 3788888875431 22333 357777555544332 4444 44555455555554433
Q ss_pred --cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec----CCccccccCChhHHHHHHHHh--CCEE
Q 037144 195 --VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV----GTTAITAVDPLKPLCDVAKQF--GIWV 266 (502)
Q Consensus 195 --~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~----gtt~~G~idpl~eI~~i~~~~--g~~l 266 (502)
.|+ ..+.||+.. +|.+|.+.++.++++.++ +|...- .--+.-.+++|+++..+.|+. ++.+
T Consensus 136 ~dfgi---~Y~~v~Lt~--~gkiD~~~v~~~i~~~tk------li~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~iv 204 (416)
T COG4100 136 KDFGI---KYKAVPLTA--DGKIDIQAVKTAISDRTK------LIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIV 204 (416)
T ss_pred HHhCc---ceeeccccc--CCcccHHHHHHhcCccce------EEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEE
Confidence 344 567788775 469999999999998775 333322 223344568888888888875 6889
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEccCCcCC
Q 037144 267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF 304 (502)
Q Consensus 267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~ 304 (502)
.||-|||-+.-.. +.-+. ++|.+..+.-|.-+
T Consensus 205 FVDNCYGEFvE~~-EPt~v-----GaDliAGSLIKNpG 236 (416)
T COG4100 205 FVDNCYGEFVEEK-EPTHV-----GADLIAGSLIKNPG 236 (416)
T ss_pred EEeccchhhhhcc-Ccccc-----chhhhccceeeCCC
Confidence 9999997765322 22222 89999999888754
No 395
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=95.31 E-value=0.076 Score=51.56 Aligned_cols=259 Identities=13% Similarity=0.151 Sum_probs=140.2
Q ss_pred CCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---C
Q 037144 174 SKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---D 250 (502)
Q Consensus 174 ~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---d 250 (502)
+.-.||++.++..-..+.-...|+ .+..+.........+|.+.+-+.+.+..... ++++=.+.+|+||.= +
T Consensus 145 ~~~~I~ip~PTWgNh~~if~~ag~---~~~~yrYyd~~t~gld~~g~ledl~~~p~gs---~ilLhaCaHNPTGvDPt~e 218 (427)
T KOG1411|consen 145 PSRDIYIPDPTWGNHKNIFKDAGL---PVKFYRYYDPKTRGLDFKGMLEDLGEAPEGS---IILLHACAHNPTGVDPTKE 218 (427)
T ss_pred cccceeecCCcccccCccccccCc---ceeeeeeccccccccchHHHHHHHhcCCCCc---EEEeehhhcCCCCCCccHH
Confidence 455789998886555556667788 6665554333356788888777776654321 233333467888742 3
Q ss_pred ChhHHHHHHHHhCCEEEeecccccccccCc---c--chhhhcCCCCCC-eeEEccCCcCCCC-CcceE--EEeeCchhhh
Q 037144 251 PLKPLCDVAKQFGIWVHVDAAYAGSACICP---E--FRHFIDGVECVD-SFSFNPHKWLFTT-LDCCC--LWVKDPSCLL 321 (502)
Q Consensus 251 pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~---~--~~~~~~~~~~aD-si~~~~hK~l~~p-~~~g~--~~~r~~~~l~ 321 (502)
..++|.++.++.+..-..|.||-|+..-.. . .|..+.. +-+ .++-++-|.++.- -..|. +++++.+...
T Consensus 219 qw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~--g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~ 296 (427)
T KOG1411|consen 219 QWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVED--GHEILLAQSYAKNMGLYGERVGALSVVCKDADEAK 296 (427)
T ss_pred HHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHc--CCceEeehhhhhhcchhhhccceeEEEecCHHHHH
Confidence 477888999999999999999988764321 1 1111110 112 4566677887522 12233 4455543322
Q ss_pred hhh-----cCCcccccCccCCCCCcccccCCCcccccCCCCCCc-hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144 322 STL-----STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRS-LKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS 395 (502)
Q Consensus 322 ~~~-----~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~ 395 (502)
+.- -..+-|-... +.++|-..- +. -..|+.--..-...+.+|.+.+++.|.+.|..
T Consensus 297 rV~SQlk~liRpmYSnPP-----------------~hGArIv~~Il~-d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~ 358 (427)
T KOG1411|consen 297 RVESQLKILIRPMYSNPP-----------------LHGARIVATILS-DPDLKNQWLGEVKGMADRIISMRQQLFDALEK 358 (427)
T ss_pred HHHHHHHHHhcccccCCC-----------------ccchhhhhhccC-ChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhc
Confidence 111 0112221110 111111100 00 00111111223456778889999999999977
Q ss_pred CCCeEEec---CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEE
Q 037144 396 DKRFEVAF---PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIY 472 (502)
Q Consensus 396 ~~~~~l~~---~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~ 472 (502)
. |-..-. ..+.+++||.-.. .+-.+.|.++-.++++. +
T Consensus 359 ~-gs~~~W~hI~~QIGMF~fTgl~--------------------------------peQv~~l~ke~~iYmT~---d--- 399 (427)
T KOG1411|consen 359 E-GSPGNWSHITKQIGMFCFTGLN--------------------------------PEQVDWLTKEYHIYLTK---D--- 399 (427)
T ss_pred C-CCCccHHHHHHhhheeeecCCC--------------------------------HHHHHHHHhhheeeecc---C---
Confidence 5 322200 2467899985432 23345555556555554 2
Q ss_pred EEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 473 VLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 473 ~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
-|+|+.+. ++ ..+.++.++|.++.+
T Consensus 400 -GRiS~aG~-ss-~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 400 -GRISMAGL-SS-SNVPYLADAIHAVTK 424 (427)
T ss_pred -ceEeeccc-cc-cCCcccchhhHhHhc
Confidence 27787654 33 368888888877653
No 396
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=92.73 E-value=0.26 Score=43.12 Aligned_cols=63 Identities=5% Similarity=-0.014 Sum_probs=46.3
Q ss_pred cccChhhHHHHHHHHHHHHHhcC--CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144 108 WISSPAAVELENIVMDWLGQMLD--LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH 185 (502)
Q Consensus 108 ~~~~p~~~~le~~~~~~l~~l~g--~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (502)
|....+..++.+.+++|+.+.+| .+-.. ...++|+|++.++..++.+..+ +++.|++..+.+
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~p-----d~Ivvt~Ga~~al~~l~~~l~d-----------pGD~VlVp~P~Y 151 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFDA-----DMIVLSAGATAANEIIMFCIAD-----------PGDAFLVPTPYY 151 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccch-----hheEEcCCHHHHHHHHHHHHcC-----------CCCEEEEeCCCC
Confidence 44445678899999999999988 32111 2689999999998777766654 678888887665
Q ss_pred h
Q 037144 186 C 186 (502)
Q Consensus 186 ~ 186 (502)
.
T Consensus 152 ~ 152 (153)
T PLN02994 152 A 152 (153)
T ss_pred C
Confidence 3
No 397
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=71.45 E-value=12 Score=33.86 Aligned_cols=53 Identities=11% Similarity=-0.031 Sum_probs=42.3
Q ss_pred HHHHHHHHHHH-hc-CCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeec
Q 037144 218 ESVLSQINLDV-EA-ELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDA 270 (502)
Q Consensus 218 ~~Le~~i~~~~-~~-g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDa 270 (502)
++|..+++.-. +. ...-++|++|-|.+..|.++|++.-+++++++|+.+|+=|
T Consensus 95 dAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iytIg 149 (191)
T cd01455 95 EATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQPKKLADALAREPNVNAFVIF 149 (191)
T ss_pred HHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEEEE
Confidence 88888887654 22 2334788889999999999999988899999999998754
No 398
>COG0386 BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]
Probab=67.30 E-value=45 Score=28.97 Aligned_cols=95 Identities=12% Similarity=0.184 Sum_probs=62.8
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC--ChhHHHHHHHH-hCCE------EEeecc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD--PLKPLCDVAKQ-FGIW------VHVDAA 271 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id--pl~eI~~i~~~-~g~~------lhVDaA 271 (502)
.+..|-+-..-.++.-.+.||++-++-..+| ++|+-.+++..|.-. +-+||.++|+. ||+- ++|-|.
T Consensus 27 VlLIVNtASkCGfTpQYegLe~Ly~ky~~~G----f~VLgFPcNQF~~QEPg~~eEI~~fC~~~YgVtFp~f~Ki~VnG~ 102 (162)
T COG0386 27 VLLIVNTASKCGFTPQYEGLEALYKKYKDKG----FEVLGFPCNQFGGQEPGSDEEIAKFCQLNYGVTFPMFSKIDVNGK 102 (162)
T ss_pred EEEEEEcccccCCcHhHHHHHHHHHHHhhCC----cEEEeccccccccCCCCCHHHHHHHHHhccCceeeeeeEEeecCC
Confidence 3344444333346667889999998888887 788888998888664 58899999985 7753 566554
Q ss_pred cccccccCccchhhhc---CCCCCCeeEEccCCcCC
Q 037144 272 YAGSACICPEFRHFID---GVECVDSFSFNPHKWLF 304 (502)
Q Consensus 272 ~g~~~~~~~~~~~~~~---~~~~aDsi~~~~hK~l~ 304 (502)
.+. |-++.+.. +......|-|+++|++-
T Consensus 103 ~a~-----PLy~~L~~~~~g~~~~~~IkWNFtKFLv 133 (162)
T COG0386 103 NAH-----PLYKYLKEQKPGKLGGKDIKWNFTKFLV 133 (162)
T ss_pred CCC-----cHHHHHHhcCCCCccCCccceeeEEEEE
Confidence 322 22333321 22346788999999874
No 399
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=65.05 E-value=83 Score=29.21 Aligned_cols=67 Identities=13% Similarity=0.146 Sum_probs=38.3
Q ss_pred hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC---ChhHHHHHHHHhC
Q 037144 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD---PLKPLCDVAKQFG 263 (502)
Q Consensus 187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id---pl~eI~~i~~~~g 263 (502)
...+.|+.+|+ .++.++++... ....+.|..++.+..+.|.. .+ .+|.++ +-..+-.+|.+.|
T Consensus 47 ~~~~~A~~lgi---p~~~i~~~~~~--~~~~~~l~~~l~~~~~~g~~-~v--------v~G~i~sd~~~~~~e~v~~~~g 112 (218)
T TIGR03679 47 LTRLQAEALGI---PLVKIETSGEK--EKEVEDLKGALKELKREGVE-GI--------VTGAIASRYQKSRIERICEELG 112 (218)
T ss_pred HHHHHHHHhCC---CEEEEECCCCC--hHHHHHHHHHHHHHHHcCCC-EE--------EECCcccHhHHHHHHHHHHhCC
Confidence 45667888999 88888876311 23455677777665544421 11 123332 3445557777666
Q ss_pred CEEE
Q 037144 264 IWVH 267 (502)
Q Consensus 264 ~~lh 267 (502)
+.++
T Consensus 113 l~~~ 116 (218)
T TIGR03679 113 LKVF 116 (218)
T ss_pred CeEE
Confidence 6544
No 400
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=63.24 E-value=81 Score=32.26 Aligned_cols=131 Identities=18% Similarity=0.234 Sum_probs=74.5
Q ss_pred CeEEEeCCCCchh-HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecC--------Ccc
Q 037144 175 KLVVYSSDQTHCA-FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVG--------TTA 245 (502)
Q Consensus 175 ~~~v~~s~~~H~s-~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g--------tt~ 245 (502)
+.++|+|...-.. +.-=|+.+|+..+++...+ ..+++++.+.+++. +|.+||+..- ++.
T Consensus 121 ~~vLYVsGEES~~QiklRA~RL~~~~~~l~l~a-------Et~~e~I~~~l~~~-----~p~lvVIDSIQT~~s~~~~Sa 188 (456)
T COG1066 121 GKVLYVSGEESLQQIKLRADRLGLPTNNLYLLA-------ETNLEDIIAELEQE-----KPDLVVIDSIQTLYSEEITSA 188 (456)
T ss_pred CcEEEEeCCcCHHHHHHHHHHhCCCccceEEeh-------hcCHHHHHHHHHhc-----CCCEEEEeccceeecccccCC
Confidence 4788998665444 3334678898665665554 45888998888763 3656666542 334
Q ss_pred ccccCChh----HHHHHHHHhCCEE----Ee--ecccccccccC---ccchhhhcCCCCCCeeEEccCCcCCCC-CcceE
Q 037144 246 ITAVDPLK----PLCDVAKQFGIWV----HV--DAAYAGSACIC---PEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCC 311 (502)
Q Consensus 246 ~G~idpl~----eI~~i~~~~g~~l----hV--DaA~g~~~~~~---~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~ 311 (502)
.|.+.-++ +|.++||+.|+++ || ||+-+|.-.+- |.. -.+.|=.....=.+-.+|.=+++ -..|+
T Consensus 189 pGsVsQVRe~t~~L~~~AK~~~i~~fiVGHVTKeG~IAGPrvLEHmVDtV-lyFEGd~~~~~RiLR~vKNRFG~t~EiGv 267 (456)
T COG1066 189 PGSVSQVREVAAELMRLAKTKNIAIFIVGHVTKEGAIAGPRVLEHMVDTV-LYFEGDRHSRYRILRSVKNRFGATNELGV 267 (456)
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCeEEEEEEEcccccccCchheeeeeeEE-EEEeccCCCceeeeehhcccCCcccceeE
Confidence 46664444 6677899999886 44 66666653320 000 00111112223344455654333 44677
Q ss_pred EEeeCch
Q 037144 312 LWVKDPS 318 (502)
Q Consensus 312 ~~~r~~~ 318 (502)
|-+++..
T Consensus 268 FeM~~~G 274 (456)
T COG1066 268 FEMTENG 274 (456)
T ss_pred EEEecCC
Confidence 7776654
No 401
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=57.01 E-value=64 Score=28.75 Aligned_cols=69 Identities=14% Similarity=0.247 Sum_probs=45.2
Q ss_pred CeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhH
Q 037144 175 KLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKP 254 (502)
Q Consensus 175 ~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~e 254 (502)
+.-++......+......+++|+ ++...+.+ +.++++..+.+..+.|.. +|+... -
T Consensus 79 ~Iavv~~~~~~~~~~~~~~ll~~---~i~~~~~~-------~~~e~~~~i~~~~~~G~~--viVGg~------------~ 134 (176)
T PF06506_consen 79 KIAVVGYPNIIPGLESIEELLGV---DIKIYPYD-------SEEEIEAAIKQAKAEGVD--VIVGGG------------V 134 (176)
T ss_dssp EEEEEEESS-SCCHHHHHHHHT----EEEEEEES-------SHHHHHHHHHHHHHTT----EEEESH------------H
T ss_pred cEEEEecccccHHHHHHHHHhCC---ceEEEEEC-------CHHHHHHHHHHHHHcCCc--EEECCH------------H
Confidence 34444444444568888899999 99999875 578899999888777732 333321 2
Q ss_pred HHHHHHHhCCEEE
Q 037144 255 LCDVAKQFGIWVH 267 (502)
Q Consensus 255 I~~i~~~~g~~lh 267 (502)
..++|+++|+..+
T Consensus 135 ~~~~A~~~gl~~v 147 (176)
T PF06506_consen 135 VCRLARKLGLPGV 147 (176)
T ss_dssp HHHHHHHTTSEEE
T ss_pred HHHHHHHcCCcEE
Confidence 3678899998643
No 402
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=54.92 E-value=87 Score=30.56 Aligned_cols=120 Identities=17% Similarity=0.127 Sum_probs=67.5
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC--ch--hHHHHHHHcCCCCCCEEEEecCCCCCcccCH
Q 037144 142 GGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT--HC--AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSA 217 (502)
Q Consensus 142 ~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~--H~--s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~ 217 (502)
..++|-||.+||.....+|..+.+ | -+.+.++-... +. ...-....+|. .++.++... +..++
T Consensus 65 dTlvT~GgiQSNh~r~tAavA~~l---G----l~~v~ile~~~~~y~~ngn~Ll~~l~G~---~~~~~~~~~--d~~~~- 131 (323)
T COG2515 65 DTLVTYGGIQSNHVRQTAAVAAKL---G----LKCVLILENIEANYLLNGNLLLSKLMGA---EVRAVDAGT--DIGIN- 131 (323)
T ss_pred cEEEEecccchhHHHHHHHHHHhc---C----CcEEEEEeccccccccccchhhhhhcCc---eEEEecCCC--Chhhc-
Confidence 479999999999776665544321 2 13444443222 00 12223467788 888887643 22222
Q ss_pred HHHHHHHHHHHhcCCccEEEEEecCCcccccc---CChhHHHHHHHH-hCCEEEeecccccc
Q 037144 218 ESVLSQINLDVEAELIPLFLCATVGTTAITAV---DPLKPLCDVAKQ-FGIWVHVDAAYAGS 275 (502)
Q Consensus 218 ~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---dpl~eI~~i~~~-~g~~lhVDaA~g~~ 275 (502)
..++...++..++|.+|. |+-..|+++.|.. .=..||.+-+++ ..+-.+|.++-+++
T Consensus 132 ~~~~~~~e~~~~~g~kpy-vIp~GG~~~~g~lGyv~~a~Ei~~Q~~~~~~fD~vVva~gs~g 192 (323)
T COG2515 132 ASAEELAEEVRKQGGKPY-VIPEGGSSPLGALGYVRLALEIAEQAEQLLKFDSVVVAPGSGG 192 (323)
T ss_pred hhhHHHHHHHHhcCCCCc-EeccCCcCccccccHHHHHHHHHHHHhhccCCCEEEEeCCCcc
Confidence 334455555566788886 5555568886655 555566666665 34445555544333
No 403
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=54.76 E-value=2.3e+02 Score=28.29 Aligned_cols=104 Identities=10% Similarity=0.036 Sum_probs=57.2
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch------hHHHHHHHcCCCCCCEEEEecCCCCCccc
Q 037144 142 GGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC------AFQKAAQIVGIDRKNIRAIKTTKSSSYGL 215 (502)
Q Consensus 142 ~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~------s~~~aa~~~Glg~~~v~~v~~~~~~~~~~ 215 (502)
.++-.|||..|..++..+.... |.....+-++ .... -+.+.++.+|+ ....+.++
T Consensus 62 ~iV~lSGGkDSs~la~ll~~~~--------gl~~l~vt~~-~~~~~e~~~~n~~~~~~~lgv---d~~~i~~d------- 122 (343)
T TIGR03573 62 CIIGVSGGKDSTYQAHVLKKKL--------GLNPLLVTVD-PGWNTELGVKNLNNLIKKLGF---DLHTITIN------- 122 (343)
T ss_pred EEEECCCCHHHHHHHHHHHHHh--------CCceEEEEEC-CCCCCHHHHHHHHHHHHHcCC---CeEEEeCC-------
Confidence 4677899998887654433221 1121222222 2222 25556677898 88887664
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144 216 SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 274 (502)
Q Consensus 216 d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~ 274 (502)
++.+.+.+....+....|.. ....-....+.++|+++|+.+++.|..+.
T Consensus 123 -~~~~~~l~~~~~~~~~~pc~---------~c~~~~~~~l~~~A~~~gi~~Il~G~~~d 171 (343)
T TIGR03573 123 -PETFRKLQRAYFKKVGDPEW---------PQDHAIFASVYQVALKFNIPLIIWGENIA 171 (343)
T ss_pred -HHHHHHHHHHHHhccCCCch---------hhhhHHHHHHHHHHHHhCCCEEEeCCCHH
Confidence 34444444333222111211 11123356788999999999999986544
No 404
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=52.08 E-value=1.4e+02 Score=28.70 Aligned_cols=83 Identities=16% Similarity=0.086 Sum_probs=56.2
Q ss_pred CchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc-cc---cCChhHHHHHH
Q 037144 184 THCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI-TA---VDPLKPLCDVA 259 (502)
Q Consensus 184 ~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~-G~---idpl~eI~~i~ 259 (502)
.+..+.+.+.-.| ..+.+...- ..++++++.+++.-.+.|..-+ ++.-.|++.. +. .-++..|..+.
T Consensus 120 ~n~~LL~~~a~~g----kPVilk~G~----~~t~~e~~~Ave~i~~~Gn~~i-~l~~rG~s~y~~~~~~~~dl~~i~~lk 190 (260)
T TIGR01361 120 QNFELLKEVGKQG----KPVLLKRGM----GNTIEEWLYAAEYILSSGNGNV-ILCERGIRTFEKATRNTLDLSAVPVLK 190 (260)
T ss_pred cCHHHHHHHhcCC----CcEEEeCCC----CCCHHHHHHHHHHHHHcCCCcE-EEEECCCCCCCCCCcCCcCHHHHHHHH
Confidence 4555666655555 456666421 3489999999988877776443 3333355333 43 46788999998
Q ss_pred HHhCCEEEeecccccc
Q 037144 260 KQFGIWVHVDAAYAGS 275 (502)
Q Consensus 260 ~~~g~~lhVDaA~g~~ 275 (502)
+++++.+..|..|.++
T Consensus 191 ~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 191 KETHLPIIVDPSHAAG 206 (260)
T ss_pred HhhCCCEEEcCCCCCC
Confidence 8899999999999766
No 405
>PF07071 DUF1341: Protein of unknown function (DUF1341); InterPro: IPR010763 Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.; PDB: 3NZR_D 3LM7_A 3M0Z_B 3M6Y_A 3N73_A 3MUX_A.
Probab=52.02 E-value=62 Score=29.45 Aligned_cols=69 Identities=9% Similarity=0.084 Sum_probs=43.8
Q ss_pred hHHHHHHH-cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc--CChhHHHHHHHHhC
Q 037144 187 AFQKAAQI-VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV--DPLKPLCDVAKQFG 263 (502)
Q Consensus 187 s~~~aa~~-~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i--dpl~eI~~i~~~~g 263 (502)
+++.++.+ ..+|...++++|.. |.-.+++|+..-+.+.++|. .+ -+||-| |.+++|.++|.+.|
T Consensus 136 ~vetAiaml~dmG~~SiKffPm~----Gl~~leE~~avAkA~a~~g~---~l------EPTGGIdl~N~~~I~~i~l~aG 202 (218)
T PF07071_consen 136 PVETAIAMLKDMGGSSIKFFPMG----GLKHLEELKAVAKACARNGF---TL------EPTGGIDLDNFEEIVKICLDAG 202 (218)
T ss_dssp EHHHHHHHHHHTT--EEEE---T----TTTTHHHHHHHHHHHHHCT----EE------EEBSS--TTTHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHcCCCeeeEeecC----CcccHHHHHHHHHHHHHcCc---ee------CCcCCcCHHHHHHHHHHHHHcC
Confidence 45665543 45666689999985 35578999988888888772 11 267877 78999999999998
Q ss_pred CEEEe
Q 037144 264 IWVHV 268 (502)
Q Consensus 264 ~~lhV 268 (502)
+..++
T Consensus 203 v~~vi 207 (218)
T PF07071_consen 203 VEKVI 207 (218)
T ss_dssp -S-B-
T ss_pred CCeec
Confidence 76543
No 406
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=50.96 E-value=88 Score=24.89 Aligned_cols=72 Identities=11% Similarity=0.217 Sum_probs=43.7
Q ss_pred CCeEEEeCCCCchhH--HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC
Q 037144 174 SKLVVYSSDQTHCAF--QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP 251 (502)
Q Consensus 174 ~~~~v~~s~~~H~s~--~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp 251 (502)
.+.+||.....++|. .+...-.|+ ....+.++.+ .+..++.+.+.+.+.....|.+++ +....|..|+
T Consensus 8 ~~Vvvysk~~Cp~C~~ak~~L~~~~i---~~~~vdid~~----~~~~~~~~~l~~~tg~~tvP~Vfi---~g~~iGG~dd 77 (99)
T TIGR02189 8 KAVVIFSRSSCCMCHVVKRLLLTLGV---NPAVHEIDKE----PAGKDIENALSRLGCSPAVPAVFV---GGKLVGGLEN 77 (99)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC---CCEEEEcCCC----ccHHHHHHHHHHhcCCCCcCeEEE---CCEEEcCHHH
Confidence 456777777777764 344556688 7778887642 244566667765543445575432 2356777887
Q ss_pred hhHH
Q 037144 252 LKPL 255 (502)
Q Consensus 252 l~eI 255 (502)
+.++
T Consensus 78 l~~l 81 (99)
T TIGR02189 78 VMAL 81 (99)
T ss_pred HHHH
Confidence 7654
No 407
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=50.26 E-value=1.5e+02 Score=28.23 Aligned_cols=83 Identities=10% Similarity=0.055 Sum_probs=55.7
Q ss_pred CchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec-CCccccc----cCChhHHHHH
Q 037144 184 THCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV-GTTAITA----VDPLKPLCDV 258 (502)
Q Consensus 184 ~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt~~G~----idpl~eI~~i 258 (502)
.++.+.+++...| ..+.+... .-.++++++.+++.-.+.|..- |+++. |++.... .-++..|..+
T Consensus 110 ~n~~LL~~va~tg----kPVilk~G----~~~t~~e~~~A~e~i~~~Gn~~--i~L~eRg~~~Y~~~~~n~~dl~ai~~l 179 (250)
T PRK13397 110 QNFEFLKTLSHID----KPILFKRG----LMATIEEYLGALSYLQDTGKSN--IILCERGVRGYDVETRNMLDIMAVPII 179 (250)
T ss_pred cCHHHHHHHHccC----CeEEEeCC----CCCCHHHHHHHHHHHHHcCCCe--EEEEccccCCCCCccccccCHHHHHHH
Confidence 3566666655455 46666642 1579999999998877767543 33333 4433332 4567888888
Q ss_pred HHHhCCEEEeeccccccc
Q 037144 259 AKQFGIWVHVDAAYAGSA 276 (502)
Q Consensus 259 ~~~~g~~lhVDaA~g~~~ 276 (502)
.+++++.+++|.+|.++.
T Consensus 180 k~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 180 QQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred HHHhCCCeEECCCCCCcc
Confidence 888999999999997664
No 408
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=50.15 E-value=16 Score=32.15 Aligned_cols=49 Identities=14% Similarity=0.252 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC--CEEEeecccccc
Q 037144 216 SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG--IWVHVDAAYAGS 275 (502)
Q Consensus 216 d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g--~~lhVDaA~g~~ 275 (502)
|..+|+++++...+ +|++ -+|.+-.|+++.+..++.| +++|||=..|..
T Consensus 12 ~~~~le~~les~~~------~vfl-----L~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl~ 62 (181)
T COG1954 12 DNKDLEKALESESQ------YVFL-----LTGHILNIKEIVKKLKNRGKTVFIHVDLVEGLS 62 (181)
T ss_pred hHHHHHHHhcCCCe------EEEE-----EechhhhHHHHHHHHHhCCcEEEEEeHHhcccC
Confidence 56778888876543 4444 3678899999999999987 689999766543
No 409
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=49.88 E-value=1.9e+02 Score=27.77 Aligned_cols=78 Identities=12% Similarity=0.001 Sum_probs=49.3
Q ss_pred CCeEEEeCCCCchhHHHHH---HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-
Q 037144 174 SKLVVYSSDQTHCAFQKAA---QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV- 249 (502)
Q Consensus 174 ~~~~v~~s~~~H~s~~~aa---~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i- 249 (502)
+..+|++.....--..-+. +..|+ ++..+|+|-. |++++++..++...++...-++|-++|....|.+
T Consensus 30 g~~liLvaR~~~kL~~la~~l~~~~~v---~v~vi~~DLs-----~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~ 101 (265)
T COG0300 30 GYNLILVARREDKLEALAKELEDKTGV---EVEVIPADLS-----DPEALERLEDELKERGGPIDVLVNNAGFGTFGPFL 101 (265)
T ss_pred CCEEEEEeCcHHHHHHHHHHHHHhhCc---eEEEEECcCC-----ChhHHHHHHHHHHhcCCcccEEEECCCcCCccchh
Confidence 4567788765543222222 23466 8889998843 5677777666655555556678888898888866
Q ss_pred -CChhHHHHHH
Q 037144 250 -DPLKPLCDVA 259 (502)
Q Consensus 250 -dpl~eI~~i~ 259 (502)
-+++++.++-
T Consensus 102 ~~~~~~~~~mi 112 (265)
T COG0300 102 ELSLDEEEEMI 112 (265)
T ss_pred hCChHHHHHHH
Confidence 3455555543
No 410
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=49.00 E-value=49 Score=32.19 Aligned_cols=57 Identities=11% Similarity=0.053 Sum_probs=40.7
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
++++|.+.+++.++...+.|-.-+++..+.|....=..++-.++.+.+.+. ++++++
T Consensus 15 dg~iD~~~l~~l~~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 15 DGSFDEDAYRAHVEWLLSYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 569999999999998888776666666666666666667777777766554 355554
No 411
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=47.28 E-value=25 Score=34.33 Aligned_cols=52 Identities=8% Similarity=0.224 Sum_probs=40.6
Q ss_pred CCcccCHHHHHHHHHHHHh-cCCccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144 211 SSYGLSAESVLSQINLDVE-AELIPLFLCATVGTTAITAVDPLKPLCDVAKQF 262 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~-~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~ 262 (502)
.++.+|.+.+++.++...+ .|-.-+++..+.|....=..+.-.++.+.+.++
T Consensus 17 ~dg~iD~~~~~~li~~l~~~~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~~ 69 (293)
T PRK04147 17 EDGQIDEQGLRRLVRFNIEKQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEE 69 (293)
T ss_pred CCCCcCHHHHHHHHHHHHhcCCCCEEEECCCccccccCCHHHHHHHHHHHHHH
Confidence 4679999999999998888 887666777777776666677777777777654
No 412
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=46.34 E-value=38 Score=32.83 Aligned_cols=52 Identities=12% Similarity=0.215 Sum_probs=41.4
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144 211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF 262 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~ 262 (502)
.++.+|.+.+++.++...+.|-..+++..+.|....=..+.-.++.+++.++
T Consensus 14 ~dg~iD~~~~~~~i~~l~~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~ 65 (284)
T cd00950 14 DDGSVDFDALERLIEFQIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEA 65 (284)
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHH
Confidence 3579999999999998888887777777777777776778888888877665
No 413
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=46.20 E-value=48 Score=30.16 Aligned_cols=49 Identities=20% Similarity=0.160 Sum_probs=37.6
Q ss_pred HHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144 219 SVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 219 ~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV 268 (502)
+=|..++=.+-+|..|..|++-.-+ ..|.....+++.++|++||+.++.
T Consensus 142 HTEasVdLarlAGl~Pa~VicEi~~-~dG~mar~~~~~~fa~~h~l~~it 190 (203)
T COG0108 142 HTEAAVDLARLAGLKPAGVICEIMN-DDGTMARLPELEEFAKEHGLPVIT 190 (203)
T ss_pred hHHHHHHHHHHcCCCCcEEEEEEeC-CCccccChHHHHHHHHHcCCcEEE
Confidence 4455565556688889777776643 489999999999999999998763
No 414
>PRK05872 short chain dehydrogenase; Provisional
Probab=45.69 E-value=2.2e+02 Score=27.54 Aligned_cols=68 Identities=12% Similarity=-0.006 Sum_probs=38.0
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
.|++..-......+.++.++. ...+..+++| --|.+.+++++++..+....+-+|+.++|....+.+.
T Consensus 35 ~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~ 102 (296)
T PRK05872 35 KLALVDLEEAELAALAAELGG-DDRVLTVVAD-----VTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVA 102 (296)
T ss_pred EEEEEeCCHHHHHHHHHHhcC-CCcEEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcc
Confidence 343333333344555555543 2266776676 3478888888876544323345777777765555443
No 415
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=44.87 E-value=39 Score=29.89 Aligned_cols=72 Identities=18% Similarity=0.258 Sum_probs=38.9
Q ss_pred CeEEEeCCCC-chhHHHHHHHcCCCCCCEEEEecCCCCC--cccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 175 KLVVYSSDQT-HCAFQKAAQIVGIDRKNIRAIKTTKSSS--YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 175 ~~~v~~s~~~-H~s~~~aa~~~Glg~~~v~~v~~~~~~~--~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+-+|..+... .......++-.|+ +++.+++..... ..+..+.+.++++--......|++|....|..-||.+
T Consensus 34 KTII~L~~e~~~~~~~~f~~~~~I---~l~~~~~~~~~~~~~~~~~~~v~~aL~~ild~~n~PvLiHC~~G~~rTG~v 108 (164)
T PF03162_consen 34 KTIINLRPEPPSQDFLEFAEENGI---KLIHIPMSSSKDPWVPISEEQVAEALEIILDPRNYPVLIHCNHGKDRTGLV 108 (164)
T ss_dssp SEEEE--SS---HHHHHHHHHTT----EEEE-------GGG----HHHHHHHHHHHH-GGG-SEEEE-SSSSSHHHHH
T ss_pred ceEEEecCCCCCHHHHHHHhhcCc---eEEEeccccccCccccCCHHHHHHHHHHHhCCCCCCEEEEeCCCCcchhhH
Confidence 4456555443 3456667888999 999999864321 3467788888776443334569999999999999964
No 416
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=44.80 E-value=2.1e+02 Score=28.96 Aligned_cols=59 Identities=8% Similarity=-0.022 Sum_probs=42.8
Q ss_pred cCHHHHHHHHHHHHhcCCccEEEEEec-CCcccc---cc-CChhHHHHHHHHhCCEEEeecccccc
Q 037144 215 LSAESVLSQINLDVEAELIPLFLCATV-GTTAIT---AV-DPLKPLCDVAKQFGIWVHVDAAYAGS 275 (502)
Q Consensus 215 ~d~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt~~G---~i-dpl~eI~~i~~~~g~~lhVDaA~g~~ 275 (502)
.++++++.+++.-.+.|... |+++. |++... .. -++..|..+.+++++.+.+|..|.++
T Consensus 236 ~t~~e~~~Ave~i~~~Gn~~--i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 236 ATIEEFIYAAEYIMSQGNGQ--IILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred CCHHHHHHHHHHHHHCCCCC--EEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 69999999998877777644 33333 444322 11 37889999888899999999999765
No 417
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=44.66 E-value=54 Score=33.27 Aligned_cols=97 Identities=18% Similarity=0.281 Sum_probs=57.7
Q ss_pred EeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcc-cCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHH
Q 037144 179 YSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYG-LSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCD 257 (502)
Q Consensus 179 ~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~-~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~ 257 (502)
++....|..+.|. +++.. .+++.+++.. +.+. .+.+.|-+.++...++- -.|+++ -..-|.+.+++++.+
T Consensus 95 l~~~~~r~T~~K~-Rv~s~-nQQllRvD~E--e~~~~~~~~~ll~~~~~~l~~~---~~vVLS--DY~KG~L~~~q~~I~ 165 (467)
T COG2870 95 LLRDKNRPTIVKL-RVLSR-NQQLLRLDFE--EKFPIEDENKLLEKIKNALKSF---DALVLS--DYAKGVLTNVQKMID 165 (467)
T ss_pred eEeecCCCceeee-eeecc-cceEEEeccc--ccCcchhHHHHHHHHHHHhhcC---CEEEEe--ccccccchhHHHHHH
Confidence 3455567666654 33333 2255555543 2223 34555555555443321 133333 456799999999999
Q ss_pred HHHHhCCEEEee------cccccccccCccchh
Q 037144 258 VAKQFGIWVHVD------AAYAGSACICPEFRH 284 (502)
Q Consensus 258 i~~~~g~~lhVD------aA~g~~~~~~~~~~~ 284 (502)
+|++.|..+.|| .=|.|..+..|..+.
T Consensus 166 ~ar~~~~pVLvDPKg~Df~~Y~GAtLiTPN~~E 198 (467)
T COG2870 166 LAREAGIPVLVDPKGKDFEKYRGATLITPNLKE 198 (467)
T ss_pred HHHHcCCcEEECCCCcchhhhCCCeecCCCHHH
Confidence 999999999999 345565666665443
No 418
>PRK10638 glutaredoxin 3; Provisional
Probab=44.39 E-value=1.3e+02 Score=22.76 Aligned_cols=69 Identities=13% Similarity=0.172 Sum_probs=41.3
Q ss_pred CeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCCh
Q 037144 175 KLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPL 252 (502)
Q Consensus 175 ~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl 252 (502)
+.++|....+.+| ..+..+..|+ ....++++.+ .+ ..+.+.+.......|.+++ +....|..+++
T Consensus 3 ~v~ly~~~~Cp~C~~a~~~L~~~gi---~y~~~dv~~~------~~-~~~~l~~~~g~~~vP~i~~---~g~~igG~~~~ 69 (83)
T PRK10638 3 NVEIYTKATCPFCHRAKALLNSKGV---SFQEIPIDGD------AA-KREEMIKRSGRTTVPQIFI---DAQHIGGCDDL 69 (83)
T ss_pred cEEEEECCCChhHHHHHHHHHHcCC---CcEEEECCCC------HH-HHHHHHHHhCCCCcCEEEE---CCEEEeCHHHH
Confidence 4677877777766 3456677888 8888888642 22 2333444444455675533 34566666666
Q ss_pred hHHH
Q 037144 253 KPLC 256 (502)
Q Consensus 253 ~eI~ 256 (502)
.++.
T Consensus 70 ~~~~ 73 (83)
T PRK10638 70 YALD 73 (83)
T ss_pred HHHH
Confidence 6553
No 419
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=44.15 E-value=2.5e+02 Score=25.50 Aligned_cols=67 Identities=13% Similarity=0.119 Sum_probs=38.7
Q ss_pred hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhC
Q 037144 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFG 263 (502)
Q Consensus 187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g 263 (502)
...+.|+.+|+ .++.++++.+. .--.+.|.+.|.+..++|. ..+ .+|.++. -..+-++|++.|
T Consensus 49 ~~~~~A~~lgi---pl~~i~~~~~~--e~~~~~l~~~l~~~~~~g~-~~v--------v~G~i~sd~~~~~~e~~~~~~g 114 (194)
T cd01994 49 LLELQAEAMGI---PLIRIEISGEE--EDEVEDLKELLRKLKEEGV-DAV--------VFGAILSEYQRTRVERVCERLG 114 (194)
T ss_pred HHHHHHHHcCC---cEEEEeCCCCc--hHHHHHHHHHHHHHHHcCC-CEE--------EECccccHHHHHHHHHHHHHcC
Confidence 45667888999 88888764311 1122566666666544331 111 2455532 345667888888
Q ss_pred CEEE
Q 037144 264 IWVH 267 (502)
Q Consensus 264 ~~lh 267 (502)
+..+
T Consensus 115 l~~~ 118 (194)
T cd01994 115 LEPL 118 (194)
T ss_pred CEEE
Confidence 7654
No 420
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=42.55 E-value=34 Score=33.54 Aligned_cols=51 Identities=12% Similarity=0.163 Sum_probs=44.8
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF 262 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~ 262 (502)
++.+|.+++++.++...++|-.-++++.|.|...+=+.++-.++.+.+.+.
T Consensus 19 dg~vD~~a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~ 69 (299)
T COG0329 19 DGSVDEEALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEA 69 (299)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHH
Confidence 468999999999999988887777888888999998899999999988875
No 421
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=42.28 E-value=2e+02 Score=28.84 Aligned_cols=83 Identities=8% Similarity=-0.013 Sum_probs=54.3
Q ss_pred chhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCC-----ccccccCChhHHHHHH
Q 037144 185 HCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGT-----TAITAVDPLKPLCDVA 259 (502)
Q Consensus 185 H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gt-----t~~G~idpl~eI~~i~ 259 (502)
++.+.+++...| ..+.+... -.++++++..+++.-.+.|..- ++++-.|. +.+-..-++..|..+.
T Consensus 197 n~~LL~~va~t~----kPVllk~G----~~~t~ee~~~A~e~i~~~Gn~~-viL~erG~rtf~s~y~~~~~dl~ai~~lk 267 (352)
T PRK13396 197 NFSLLKKVGAQD----KPVLLKRG----MAATIDEWLMAAEYILAAGNPN-VILCERGIRTFDRQYTRNTLDLSVIPVLR 267 (352)
T ss_pred CHHHHHHHHccC----CeEEEeCC----CCCCHHHHHHHHHHHHHcCCCe-EEEEecCCccCcCCCCCCCcCHHHHHHHH
Confidence 344444444333 45556542 2459999999998877666533 44444443 2233446899999998
Q ss_pred HHhCCEEEeeccccccc
Q 037144 260 KQFGIWVHVDAAYAGSA 276 (502)
Q Consensus 260 ~~~g~~lhVDaA~g~~~ 276 (502)
+.+++.+++|.+|+.+.
T Consensus 268 ~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 268 SLTHLPIMIDPSHGTGK 284 (352)
T ss_pred HhhCCCEEECCcccCCc
Confidence 88899999999998764
No 422
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=42.24 E-value=3e+02 Score=28.08 Aligned_cols=130 Identities=12% Similarity=0.172 Sum_probs=67.8
Q ss_pred EEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHH
Q 037144 143 GVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLS 222 (502)
Q Consensus 143 g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~ 222 (502)
+++-++|..+.-.|...+++. ...+.+.+. +--+..++....+. ++..+.+| ..|.++|++
T Consensus 4 ilviGaG~Vg~~va~~la~~~----------d~~V~iAdR-s~~~~~~i~~~~~~---~v~~~~vD-----~~d~~al~~ 64 (389)
T COG1748 4 ILVIGAGGVGSVVAHKLAQNG----------DGEVTIADR-SKEKCARIAELIGG---KVEALQVD-----AADVDALVA 64 (389)
T ss_pred EEEECCchhHHHHHHHHHhCC----------CceEEEEeC-CHHHHHHHHhhccc---cceeEEec-----ccChHHHHH
Confidence 556666666665555555441 233444443 33333344333333 67777776 458899999
Q ss_pred HHHHHHhcCCccEEEEEecCCccc----------cc--------cCChhHHHHHHHHhCCEEEeecccccccc--cC-cc
Q 037144 223 QINLDVEAELIPLFLCATVGTTAI----------TA--------VDPLKPLCDVAKQFGIWVHVDAAYAGSAC--IC-PE 281 (502)
Q Consensus 223 ~i~~~~~~g~~p~~Vv~t~gtt~~----------G~--------idpl~eI~~i~~~~g~~lhVDaA~g~~~~--~~-~~ 281 (502)
+|++. . +|+-..+.+.. |. .++..++.+.|++.|+-.+.+.-..-+.. .. .-
T Consensus 65 li~~~-d------~VIn~~p~~~~~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~G~dPGi~nv~a~~a 137 (389)
T COG1748 65 LIKDF-D------LVINAAPPFVDLTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGCGFDPGITNVLAAYA 137 (389)
T ss_pred HHhcC-C------EEEEeCCchhhHHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEcccCcCcchHHHHHHHH
Confidence 99765 1 33333332111 11 12336677777777877777754333221 00 11
Q ss_pred chhhhcCCCCCCeeEEc
Q 037144 282 FRHFIDGVECVDSFSFN 298 (502)
Q Consensus 282 ~~~~~~~~~~aDsi~~~ 298 (502)
.++..+.++.+|++..+
T Consensus 138 ~~~~~~~i~si~iy~g~ 154 (389)
T COG1748 138 AKELFDEIESIDIYVGG 154 (389)
T ss_pred HHHhhccccEEEEEEec
Confidence 12333356778888776
No 423
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=41.74 E-value=54 Score=29.84 Aligned_cols=51 Identities=16% Similarity=0.134 Sum_probs=37.6
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144 216 SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 216 d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh 267 (502)
....-|.+++=..-.|..|..|++..-+ ..|..-+.+++.++|++||+.++
T Consensus 135 R~GhtEaavdLa~lAGl~p~avi~eil~-~dG~~~~~~~~~~fA~~~~l~~v 185 (194)
T PF00926_consen 135 RRGHTEAAVDLARLAGLSPVAVICEILD-DDGDMARRDELEEFAKKHGLPIV 185 (194)
T ss_dssp SSSHHHHHHHHHHHTTS-SBEEEEEBBE-TTSSBHCHHHHHHHHHHTT-EEE
T ss_pred CCChHHHHHHHHHHhCCCCcEEEEEEeC-CCCCcCCHHHHHHHHHHcCCcEE
Confidence 3445566666666688888877777754 38899999999999999998875
No 424
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=41.36 E-value=56 Score=30.95 Aligned_cols=98 Identities=18% Similarity=0.102 Sum_probs=54.8
Q ss_pred EEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch----hH---HHHHHHcCCCCCCEEEEecCCCCCccc
Q 037144 143 GVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC----AF---QKAAQIVGIDRKNIRAIKTTKSSSYGL 215 (502)
Q Consensus 143 g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~----s~---~~aa~~~Glg~~~v~~v~~~~~~~~~~ 215 (502)
.+..|||..+.+.|..+.-.. ++-++-++...-| ++ ...|+..|+ +-..++++ .|
T Consensus 21 ~vAfSGGvDSslLa~la~~~l----------G~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi---~H~~i~~~-----~~ 82 (269)
T COG1606 21 VVAFSGGVDSSLLAKLAKEAL----------GDNVVAVTVDSPYIPRREIEEAKNIAKEIGI---RHEFIKMN-----RM 82 (269)
T ss_pred EEEecCCccHHHHHHHHHHHh----------ccceEEEEEecCCCChhhhhHHHHHHHHhCC---cceeeehh-----hc
Confidence 566778888776665543221 2223322222222 22 334667899 88888876 45
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccc
Q 037144 216 SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS 275 (502)
Q Consensus 216 d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~ 275 (502)
+++--+..-. + | ..+--+=.+.|.+.++++|.-+++||+.+.-
T Consensus 83 ~~~~~~n~~~--------r-C--------Y~CK~~v~~~l~~~a~~~Gyd~V~dGtNasD 125 (269)
T COG1606 83 DPEFKENPEN--------R-C--------YLCKRAVYSTLVEEAEKRGYDVVADGTNASD 125 (269)
T ss_pred chhhccCCCC--------c-c--------hHHHHHHHHHHHHHHHHcCCCEEEeCCcHHH
Confidence 5321111100 0 1 1122234567889999999999999987543
No 425
>smart00642 Aamy Alpha-amylase domain.
Probab=41.35 E-value=55 Score=28.96 Aligned_cols=30 Identities=27% Similarity=0.346 Sum_probs=26.1
Q ss_pred CccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 243 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 243 tt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
....|..++++++++-|+++|+.+++|.+.
T Consensus 63 ~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 63 DPRFGTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 335688899999999999999999999764
No 426
>PRK05876 short chain dehydrogenase; Provisional
Probab=41.32 E-value=2.7e+02 Score=26.48 Aligned_cols=44 Identities=7% Similarity=-0.027 Sum_probs=27.5
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+++|- -|.+++++++++..+....+-+|+-++|....|.+
T Consensus 56 ~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~ 99 (275)
T PRK05876 56 DVHGVMCDV-----RHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPI 99 (275)
T ss_pred eEEEEeCCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence 677777763 37788888877654432234466777766554544
No 427
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=41.16 E-value=2.2e+02 Score=25.25 Aligned_cols=69 Identities=7% Similarity=-0.009 Sum_probs=35.3
Q ss_pred CeEEEeCCCC--chh---HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 175 KLVVYSSDQT--HCA---FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 175 ~~~v~~s~~~--H~s---~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
.-+|+++... ... ..+..+..|. ++..+.+| .-|.++++++++...+...+...|+-.++....+.+
T Consensus 26 ~~~il~~r~~~~~~~~~~~i~~l~~~g~---~v~~~~~D-----v~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~ 97 (181)
T PF08659_consen 26 RRLILLGRSGAPSAEAEAAIRELESAGA---RVEYVQCD-----VTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPI 97 (181)
T ss_dssp SEEEEEESSGGGSTTHHHHHHHHHHTT----EEEEEE-------TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-G
T ss_pred CEEEEeccCCCccHHHHHHHHHHHhCCC---ceeeeccC-----ccCHHHHHHHHHHHHhccCCcceeeeeeeeeccccc
Confidence 3456666652 222 3334445577 89999987 458999999998776555333345555666555555
Q ss_pred CC
Q 037144 250 DP 251 (502)
Q Consensus 250 dp 251 (502)
.+
T Consensus 98 ~~ 99 (181)
T PF08659_consen 98 QD 99 (181)
T ss_dssp CC
T ss_pred cc
Confidence 44
No 428
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=40.87 E-value=53 Score=31.96 Aligned_cols=52 Identities=8% Similarity=0.056 Sum_probs=39.9
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144 211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF 262 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~ 262 (502)
.++.+|.+.+++.++...+.|-..+++..+.|....=..+.-.++.+.+.+.
T Consensus 15 ~dg~iD~~~l~~~i~~l~~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~~~ 66 (292)
T PRK03170 15 EDGSVDFAALRKLVDYLIANGTDGLVVVGTTGESPTLTHEEHEELIRAVVEA 66 (292)
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECCcCCccccCCHHHHHHHHHHHHHH
Confidence 3579999999999998888887777777666766666667777777766654
No 429
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=40.85 E-value=1.4e+02 Score=30.19 Aligned_cols=65 Identities=15% Similarity=0.084 Sum_probs=43.2
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC-ChhHHHHHHHHhCCEEEe
Q 037144 190 KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD-PLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 190 ~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id-pl~eI~~i~~~~g~~lhV 268 (502)
+.++..++ .++..-+. +-.-|++.|+++++.. +|.+|++-.+| .+ +.++++++|++||..+.+
T Consensus 182 ~V~~av~v---PLIL~gsg---~~~kD~eVLeaaLe~~--~G~kpLL~SAt--------~e~Ny~~ia~lAk~yg~~Vvv 245 (389)
T TIGR00381 182 DVLQAVDV---PIVIGGSG---NPEKDPLVLEKAAEVA--EGERCLLASAN--------LDLDYEKIANAAKKYGHVVLS 245 (389)
T ss_pred HHHHhCCC---CEEEeCCC---CCcCCHHHHHHHHHHh--CCCCcEEEecC--------chhhHHHHHHHHHHhCCeEEE
Confidence 33455566 56555442 2356999999998764 45556543333 24 899999999999998776
Q ss_pred ec
Q 037144 269 DA 270 (502)
Q Consensus 269 Da 270 (502)
=+
T Consensus 246 ~s 247 (389)
T TIGR00381 246 WT 247 (389)
T ss_pred Ec
Confidence 43
No 430
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=39.09 E-value=1.2e+02 Score=25.16 Aligned_cols=76 Identities=16% Similarity=0.179 Sum_probs=46.1
Q ss_pred CCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc--------CChh
Q 037144 182 DQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV--------DPLK 253 (502)
Q Consensus 182 ~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i--------dpl~ 253 (502)
.+...++..+++.+|+ ....||+.. +.+..++++..-..- ..-..|.+..+-.|+-.+-.. -+.+
T Consensus 44 QP~~~~i~~aa~~aGl---~y~~iPV~~---~~iT~~dV~~f~~Al-~eaegPVlayCrsGtRs~~ly~~~~~~~gm~~d 116 (130)
T COG3453 44 QPGFAAIAAAAEAAGL---TYTHIPVTG---GGITEADVEAFQRAL-DEAEGPVLAYCRSGTRSLNLYGLGELDGGMSRD 116 (130)
T ss_pred CCChHHHHHHHHhcCC---ceEEeecCC---CCCCHHHHHHHHHHH-HHhCCCEEeeecCCchHHHHHHHHHHhcCCCHH
Confidence 3445678889999999 999999974 366666665433322 222347666665554433211 3556
Q ss_pred HHHHHHHHhCC
Q 037144 254 PLCDVAKQFGI 264 (502)
Q Consensus 254 eI~~i~~~~g~ 264 (502)
+|.++.+.+|+
T Consensus 117 e~~a~g~a~G~ 127 (130)
T COG3453 117 EIEALGQAAGF 127 (130)
T ss_pred HHHHHHHhhCc
Confidence 66666666664
No 431
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=38.94 E-value=2.6e+02 Score=30.03 Aligned_cols=120 Identities=20% Similarity=0.145 Sum_probs=69.0
Q ss_pred hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEE--EeCCCCch-----
Q 037144 114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVV--YSSDQTHC----- 186 (502)
Q Consensus 114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v--~~s~~~H~----- 186 (502)
...+...+.+.+.+.+-.+.. .|++.|||-.+.+.|..+++.. +.... |.....+.
T Consensus 212 ~~~l~~~l~~sV~~r~~advp-------vg~~lSGGlDSS~Iaa~a~~~~----------~~~~~~~fsvg~~~~~~~D~ 274 (542)
T COG0367 212 AEHLRSLLEDAVKRRLVADVP-------VGVFLSGGLDSSLIAAIAAEEL----------GKEGKTTFTVGFEDSDSPDA 274 (542)
T ss_pred HHHHHHHHHHHHHHHhccCCc-------EEEEeCCCccHHHHHHHHHHhc----------cccceeeeEeecCCCCCchH
Confidence 344445555555555433333 6889999887776666555542 11111 22222222
Q ss_pred -hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 187 -AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 187 -s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
-..++|+.+|. ..+.+.+ .++++.+++.+... ..-.....+...|+=-+++.+++.+.+
T Consensus 275 ~~a~~~A~~lg~---~h~~~~~--------~~~e~~~~~~~vv~---------~~~~p~~~~~~~ply~~~~~a~~~g~k 334 (542)
T COG0367 275 KYARAVAKFLGT---PHHEIIL--------TNEELLNALPEVVK---------ALDTPGGMAASIPLYLLSRKARAEGEK 334 (542)
T ss_pred HHHHHHHHHhCC---CcEEEee--------cHHHHHHHHHHHHh---------hcCCCCcccchhHHHHHHHhhhhcCcE
Confidence 13456778888 5555544 45667777655332 111222266778888999999999998
Q ss_pred EEeec
Q 037144 266 VHVDA 270 (502)
Q Consensus 266 lhVDa 270 (502)
+...|
T Consensus 335 VvLSG 339 (542)
T COG0367 335 VVLSG 339 (542)
T ss_pred EeecC
Confidence 88853
No 432
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=38.92 E-value=55 Score=32.25 Aligned_cols=51 Identities=8% Similarity=0.062 Sum_probs=41.8
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF 262 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~ 262 (502)
+|.+|.+.+++.++...+.|-.-++|..+.|....=..++-.++.+.+.+.
T Consensus 23 ~g~iD~~~l~~lv~~li~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~~ 73 (309)
T cd00952 23 TDTVDLDETARLVERLIAAGVDGILTMGTFGECATLTWEEKQAFVATVVET 73 (309)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcccccchhCCHHHHHHHHHHHHHH
Confidence 479999999999999888887777777777887777778888888877654
No 433
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=38.82 E-value=1.2e+02 Score=27.97 Aligned_cols=70 Identities=7% Similarity=0.065 Sum_probs=51.1
Q ss_pred hHHHHHHH-cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc--CChhHHHHHHHHhC
Q 037144 187 AFQKAAQI-VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV--DPLKPLCDVAKQFG 263 (502)
Q Consensus 187 s~~~aa~~-~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i--dpl~eI~~i~~~~g 263 (502)
+++.+..+ ..+|...++++|+. |.-..++++..-+.+.++|.. + -+||.| |.+++|.++|.+-|
T Consensus 136 ~vetAiaml~dmG~~SiKffPM~----Gl~~leE~~avA~aca~~g~~-----l----EPTGGIdl~Nf~~I~~i~ldaG 202 (236)
T TIGR03581 136 PIETAIAMLKDMGGSSVKFFPMG----GLKHLEEYAAVAKACAKHGFY-----L----EPTGGIDLDNFEEIVQIALDAG 202 (236)
T ss_pred eHHHHHHHHHHcCCCeeeEeecC----CcccHHHHHHHHHHHHHcCCc-----c----CCCCCccHHhHHHHHHHHHHcC
Confidence 46665544 46677799999985 355788888888887777631 1 377877 68999999999998
Q ss_pred CEEEee
Q 037144 264 IWVHVD 269 (502)
Q Consensus 264 ~~lhVD 269 (502)
+..++=
T Consensus 203 v~kviP 208 (236)
T TIGR03581 203 VEKVIP 208 (236)
T ss_pred CCeecc
Confidence 866543
No 434
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=38.82 E-value=1.3e+02 Score=31.90 Aligned_cols=63 Identities=10% Similarity=0.092 Sum_probs=43.5
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh--CCEEEeeccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAG 274 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~--g~~lhVDaA~g~ 274 (502)
+|..++... ..++.+++.+.|.+. .|-+|.++. .+..+....++++.+++. ++.+++=|.|+.
T Consensus 39 ~V~iiD~~~---~~~~~~~~~~~l~~~-----~pdvVgis~---~t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 39 DVTFLDAMT---GPLTDEKLVERLRAH-----CPDLVLITA---ITPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred ceEEecccc---cCCCHHHHHHHHHhc-----CcCEEEEec---CcccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 788887653 257778888877653 255666654 344566777888888887 889988776643
No 435
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=38.56 E-value=1.7e+02 Score=24.76 Aligned_cols=68 Identities=18% Similarity=0.191 Sum_probs=45.6
Q ss_pred HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---------CChhHHHHHH
Q 037144 189 QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---------DPLKPLCDVA 259 (502)
Q Consensus 189 ~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---------dpl~eI~~i~ 259 (502)
...+...|+ ..+.+|+.. +.++.++++...+-- .....|+++-+..|. -+|.+ -+.++|.+.+
T Consensus 50 ~~~a~~~gl---~y~~iPv~~---~~~~~~~v~~f~~~~-~~~~~pvL~HC~sG~-Rt~~l~al~~~~~g~~~~~i~~~~ 121 (135)
T TIGR01244 50 KAAAEAAGV---TYHHQPVTA---GDITPDDVETFRAAI-GAAEGPVLAYCRSGT-RSSLLWGFRQAAEGVPVEEIVRRA 121 (135)
T ss_pred HHHHHHCCC---eEEEeecCC---CCCCHHHHHHHHHHH-HhCCCCEEEEcCCCh-HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 356677899 999999874 256666654443222 223468888888887 66663 4677888888
Q ss_pred HHhCC
Q 037144 260 KQFGI 264 (502)
Q Consensus 260 ~~~g~ 264 (502)
++.|.
T Consensus 122 ~~~G~ 126 (135)
T TIGR01244 122 QAAGY 126 (135)
T ss_pred HHcCC
Confidence 87664
No 436
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=37.94 E-value=1.5e+02 Score=25.53 Aligned_cols=62 Identities=13% Similarity=0.022 Sum_probs=40.6
Q ss_pred hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHH
Q 037144 186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCD 257 (502)
Q Consensus 186 ~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~ 257 (502)
+.+...++..|. +++...+-+| |++.++++|++..++ ...- ++++.|.+..|..|-..+..+
T Consensus 23 ~~l~~~l~~~G~---~v~~~~~v~D-----d~~~i~~~l~~~~~~-~~~D-lVittGG~s~g~~D~t~~al~ 84 (152)
T cd00886 23 PALVELLEEAGH---EVVAYEIVPD-----DKDEIREALIEWADE-DGVD-LILTTGGTGLAPRDVTPEATR 84 (152)
T ss_pred HHHHHHHHHcCC---eeeeEEEcCC-----CHHHHHHHHHHHHhc-CCCC-EEEECCCcCCCCCcCcHHHHH
Confidence 346666788888 8887776543 678888888765441 0112 445557788888888766543
No 437
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=37.47 E-value=67 Score=31.36 Aligned_cols=52 Identities=12% Similarity=0.085 Sum_probs=40.4
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144 211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF 262 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~ 262 (502)
.++.+|.+.+++.++...+.|-.-+++..+.|....=..++-.++.+.+.+.
T Consensus 19 ~dg~iD~~~l~~li~~l~~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~~ 70 (296)
T TIGR03249 19 ADGSFDEAAYRENIEWLLGYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVST 70 (296)
T ss_pred CCCCcCHHHHHHHHHHHHhcCCCEEEECCCCcCcccCCHHHHHHHHHHHHHH
Confidence 3579999999999998888887666677777777777777777888776654
No 438
>PLN02417 dihydrodipicolinate synthase
Probab=37.46 E-value=66 Score=31.14 Aligned_cols=52 Identities=17% Similarity=0.126 Sum_probs=40.2
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144 211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF 262 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~ 262 (502)
.++.+|.+.+++.++...+.|-.-+++..+.|...+=..+.-.++.+.+.+.
T Consensus 15 ~~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~ls~~Er~~~~~~~~~~ 66 (280)
T PLN02417 15 PDGRFDLEAYDSLVNMQIENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVNC 66 (280)
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccCcchhhCCHHHHHHHHHHHHHH
Confidence 3569999999999998888887667777777777777777777777766554
No 439
>PRK08265 short chain dehydrogenase; Provisional
Probab=36.93 E-value=3.3e+02 Score=25.51 Aligned_cols=58 Identities=16% Similarity=-0.059 Sum_probs=32.6
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCC
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGT 243 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gt 243 (502)
+++++. ......+.++.++- ++..+++|- .|.+.+++.++...+.-..+-.++.++|.
T Consensus 33 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g~id~lv~~ag~ 90 (261)
T PRK08265 33 VAIVDI-DADNGAAVAASLGE---RARFIATDI-----TDDAAIERAVATVVARFGRVDILVNLACT 90 (261)
T ss_pred EEEEeC-CHHHHHHHHHHhCC---eeEEEEecC-----CCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 444433 33334455555554 677888763 37788888877654432234456666654
No 440
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=36.89 E-value=2.2e+02 Score=29.78 Aligned_cols=57 Identities=16% Similarity=0.295 Sum_probs=40.7
Q ss_pred hHhhHHHHHHHHHHHHhcCcEEEEee-eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 441 EERTNEFNRELLESINVSGKVFMTHA-IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 441 ~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
..+++.+|-.|.+.|....-.|..+. ...|..++||.+. +++.|++.+++.+.+..+
T Consensus 636 KqeinhLNidLVeaLKStDaAFS~Gd~Tr~Gl~CVkFGMl---sd~kdleeLldlVaqkGK 693 (838)
T KOG0630|consen 636 KQEINHLNIDLVEALKSTDAAFSLGDCTRDGLICVKFGML---SDEKDLEELLDLVAQKGK 693 (838)
T ss_pred HHHHhhccHHHHHHHhhhhhhcccCCccccceeEEEeccc---cchhhHHHHHHHHHHhch
Confidence 34567788899998887665554332 3357789999865 577899999988876654
No 441
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=36.86 E-value=59 Score=31.55 Aligned_cols=57 Identities=14% Similarity=0.126 Sum_probs=40.4
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
++.+|.+.+++.++...+.|..-+++..+.|....=..+.-.+|.+++.++ ++.+++
T Consensus 16 dg~id~~~~~~~i~~l~~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~ 75 (289)
T PF00701_consen 16 DGSIDEDALKRLIDFLIEAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIA 75 (289)
T ss_dssp TSSB-HHHHHHHHHHHHHTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CcCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEe
Confidence 569999999999998888886666666666766666667777888777663 455554
No 442
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=36.36 E-value=64 Score=31.65 Aligned_cols=58 Identities=10% Similarity=0.033 Sum_probs=41.7
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
+++.+|.+.+++.++...++|-.-+++..+.|...+=..++-.++.+.+.+. .+.+++
T Consensus 21 ~dg~iD~~~l~~li~~l~~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 81 (303)
T PRK03620 21 ADGSFDEAAYREHLEWLAPYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIA 81 (303)
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3579999999999998888876666666666666666667777777766553 355544
No 443
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=35.97 E-value=25 Score=38.00 Aligned_cols=65 Identities=17% Similarity=0.029 Sum_probs=46.5
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144 195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 274 (502)
Q Consensus 195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~ 274 (502)
..+|...|-.+|+.+- .-+ ..=|..+ +-.-++++..|.-++++++++-|++.||-|++|-+++-
T Consensus 175 ~elG~T~IELMPv~e~---p~~-----------~sWGYq~--~g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~H 238 (628)
T COG0296 175 KELGITHIELMPVAEH---PGD-----------RSWGYQG--TGYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPNH 238 (628)
T ss_pred HHhCCCEEEEcccccC---CCC-----------CCCCCCc--ceeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 3556666777787641 111 1113333 44557899999999999999999999999999998865
Q ss_pred c
Q 037144 275 S 275 (502)
Q Consensus 275 ~ 275 (502)
+
T Consensus 239 F 239 (628)
T COG0296 239 F 239 (628)
T ss_pred C
Confidence 4
No 444
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=35.93 E-value=53 Score=31.68 Aligned_cols=57 Identities=12% Similarity=0.110 Sum_probs=39.7
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144 204 AIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF 262 (502)
Q Consensus 204 ~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~ 262 (502)
..|.++ ++.+|.+.+++.++...+.|-.-+++..+.|....=..++-.++.+.+.+.
T Consensus 6 ~TPf~~--dg~iD~~~~~~~i~~l~~~Gv~gi~~~GstGE~~~ls~~Er~~l~~~~~~~ 62 (281)
T cd00408 6 VTPFTA--DGEVDLDALRRLVEFLIEAGVDGLVVLGTTGEAPTLTDEERKEVIEAVVEA 62 (281)
T ss_pred eCCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHH
Confidence 345554 569999999999998888776655666665655555566677777766554
No 445
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=35.71 E-value=90 Score=28.56 Aligned_cols=50 Identities=14% Similarity=0.071 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144 217 AESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 217 ~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh 267 (502)
.-+-|.+++=..-.|..|..|++..- +..|.....+++.++|++||+.++
T Consensus 141 ~GhTEaavdL~~lAGl~p~~vicEil-~~dG~m~~~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 141 GGHTEASVDLAELAGLKPAGVICEMM-NDDGTMARKPELMEYAKKHNLKLI 190 (199)
T ss_pred CChHHHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCcEE
Confidence 34456666656667888877777663 347999999999999999999874
No 446
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=35.57 E-value=43 Score=28.13 Aligned_cols=47 Identities=19% Similarity=0.232 Sum_probs=28.3
Q ss_pred ccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144 214 GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 214 ~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV 268 (502)
.++.+.-++.+++-.+ .. |.+|+++.|- .|-+++.++|+++++++..
T Consensus 64 ~l~~~~r~~~l~~l~~-~~-~P~iIvt~~~------~~p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 64 SLDEEERKERLEKLFS-YN-PPCIIVTRGL------EPPPELIELAEKYNIPLLR 110 (127)
T ss_dssp CS-HHHHCCHHHHHCT-TT--S-EEEETTT---------HHHHHHHHHCT--EEE
T ss_pred HCCHHHHHHHHHHHhC-CC-CCEEEEECcC------CCCHHHHHHHHHhCCcEEE
Confidence 6777777777776544 22 3466666543 7789999999999998765
No 447
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=34.86 E-value=58 Score=32.02 Aligned_cols=59 Identities=15% Similarity=0.046 Sum_probs=42.3
Q ss_pred cccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-CChhHHHHHHHHhCCEEEeeccc
Q 037144 213 YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-DPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 213 ~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-dpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
..++.+++++.++.-.+. ....-+++-+|+-+.|.- |-..+|.++|++.|..+.+|...
T Consensus 109 p~is~~~~~~~l~~~~~~-l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 109 PEISEAELEQFLEQLKAL-LESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCCCHHHHHHHHHHHHHh-cccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 467778887776654331 112234666788888876 67899999999999999999754
No 448
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=34.50 E-value=69 Score=31.08 Aligned_cols=58 Identities=9% Similarity=0.124 Sum_probs=43.0
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144 203 RAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF 262 (502)
Q Consensus 203 ~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~ 262 (502)
...|.++ +|.+|.+.+++.++...+.|-..+++..+.|....=..+.-.++.+.+.+.
T Consensus 6 ~~TPf~~--~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~ 63 (285)
T TIGR00674 6 LITPFKE--DGSVDFAALEKLIDFQIENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDL 63 (285)
T ss_pred eeCCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHH
Confidence 3445554 569999999999998888887777776777777666667777777776654
No 449
>PRK06139 short chain dehydrogenase; Provisional
Probab=34.41 E-value=3.5e+02 Score=26.73 Aligned_cols=45 Identities=13% Similarity=0.056 Sum_probs=29.1
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
++..+++|- -|.++++++++...+....+-+++-++|....+.+.
T Consensus 57 ~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~ 101 (330)
T PRK06139 57 EVLVVPTDV-----TDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFE 101 (330)
T ss_pred cEEEEEeeC-----CCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcc
Confidence 777788763 377888888776544322344677777776666554
No 450
>PRK08263 short chain dehydrogenase; Provisional
Probab=34.36 E-value=3.9e+02 Score=25.22 Aligned_cols=44 Identities=9% Similarity=0.048 Sum_probs=26.7
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
.+..+.+|- -|.+.+++.++...+.-..+-.|+-++|....+.+
T Consensus 50 ~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~ 93 (275)
T PRK08263 50 RLLPLALDV-----TDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMI 93 (275)
T ss_pred CeeEEEccC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCcccccc
Confidence 677777763 36777877776544332234467777776555544
No 451
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=34.33 E-value=83 Score=30.72 Aligned_cols=55 Identities=13% Similarity=0.144 Sum_probs=41.4
Q ss_pred EecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH
Q 037144 205 IKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ 261 (502)
Q Consensus 205 v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~ 261 (502)
-|.++ ++.+|.+.+++.++...++|-.-+++..+.|....=..++-.++.+.+.+
T Consensus 10 TPf~~--dg~iD~~~l~~lv~~~~~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~~ 64 (294)
T TIGR02313 10 TPFKR--NGDIDEEALRELIEFQIEGGSHAISVGGTSGEPGSLTLEERKQAIENAID 64 (294)
T ss_pred CCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHH
Confidence 34443 57999999999999988888766667777777777667777777776554
No 452
>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis. Terpeniods are plant natural products with important pharmaceutical activity. DXS catalyzes a transketolase-type condensation of pyruvate with D-glyceraldehyde-3-phosphate to form 1-deoxy-D-xylulose-5-phosphate (DXP) and carbon dioxide. The formation of DXP leads to the formation of the terpene precursor IPP (isopentyl diphosphate) and to the formation of thiamine (vitamin B1) and pyridoxal (vitamin B6).
Probab=34.18 E-value=2.6e+02 Score=25.33 Aligned_cols=42 Identities=12% Similarity=0.146 Sum_probs=25.7
Q ss_pred HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe
Q 037144 189 QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCAT 240 (502)
Q Consensus 189 ~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t 240 (502)
.+.++..|. .+.. ++| ..|++++.+++++..+ ...|.+|.+.
T Consensus 147 ~~~~~a~G~---~~~~-~vd-----G~d~~~l~~a~~~a~~-~~~P~~I~~~ 188 (195)
T cd02007 147 GNLFEELGF---RYIG-PVD-----GHNIEALIKVLKEVKD-LKGPVLLHVV 188 (195)
T ss_pred HHHHHhcCC---Cccc-eEC-----CCCHHHHHHHHHHHHh-CCCCEEEEEE
Confidence 344455666 5544 233 2389999999987654 4467766653
No 453
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=34.11 E-value=1.5e+02 Score=26.24 Aligned_cols=56 Identities=21% Similarity=0.207 Sum_probs=39.0
Q ss_pred ccCHHHHHHHHHHHHhcCCccEEEEEec-CCc------------cccccCChhHHHHHHHHhCCEEEee
Q 037144 214 GLSAESVLSQINLDVEAELIPLFLCATV-GTT------------AITAVDPLKPLCDVAKQFGIWVHVD 269 (502)
Q Consensus 214 ~~d~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt------------~~G~idpl~eI~~i~~~~g~~lhVD 269 (502)
.++.++.++.+..-.+-|...++|.-+. +.. ..+..|+|+.+.+.|+++|+.|++-
T Consensus 16 ~~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~G 84 (166)
T PF14488_consen 16 NWTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVG 84 (166)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEe
Confidence 5677888888877776676554444332 111 1244589999999999999999984
No 454
>PLN02672 methionine S-methyltransferase
Probab=33.90 E-value=5.8e+02 Score=30.04 Aligned_cols=151 Identities=11% Similarity=0.133 Sum_probs=83.7
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC
Q 037144 93 VGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN 172 (502)
Q Consensus 93 ~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~ 172 (502)
++.+....-+.....|+.-.+...+.+.+...|...++.|-.. .++++.++-..|+-.++..--
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~----------- 470 (1082)
T PLN02672 407 LAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTP-----DNVVVFPSRAVAIENALRLFS----------- 470 (1082)
T ss_pred HHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCc-----cceEEeccHHHHHHHHHHhhC-----------
Confidence 3333333334445566666677889999999999999987542 367777776666544433211
Q ss_pred CCCeEEE---eCCCCchhHHHHHHHcCCCC-----CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144 173 ISKLVVY---SSDQTHCAFQKAAQIVGIDR-----KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT 244 (502)
Q Consensus 173 ~~~~~v~---~s~~~H~s~~~aa~~~Glg~-----~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt 244 (502)
++..++ .+..-|..|..+...-|.+. +.+..+.... +-| .+.+.|++- +|.+|+......
T Consensus 471 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~-----~~~~~~~~~~~~ 538 (1082)
T PLN02672 471 -PRLAIVDEHLTRWLPKKWLTSLAIENATSDSKSDDVITVIEAPR----QSD--LVIELIKKL-----KPQVVVTGMADF 538 (1082)
T ss_pred -hHHHhhhhhhhccCCHHHHhHhhhhcccccCccCCeEEEEeCCC----cch--HHHHHHHhC-----CCeEEEEeccch
Confidence 111110 22333445655555444321 1222232211 222 445555442 366666665443
Q ss_pred cccccCChhHHHHHHHHhCCEEEeecc
Q 037144 245 AITAVDPLKPLCDVAKQFGIWVHVDAA 271 (502)
Q Consensus 245 ~~G~idpl~eI~~i~~~~g~~lhVDaA 271 (502)
..-...-++.|.+.+++.|.|+..|.+
T Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 539 EMRTSTAFEHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred hhhhHHHHHHHHHHHHhhCcEEEEehh
Confidence 333334577889999999999999964
No 455
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=33.21 E-value=4.3e+02 Score=26.65 Aligned_cols=89 Identities=9% Similarity=0.006 Sum_probs=52.0
Q ss_pred eEEEeCCCCchhHHH---HHHHcCCC--CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 176 LVVYSSDQTHCAFQK---AAQIVGID--RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 176 ~~v~~s~~~H~s~~~---aa~~~Glg--~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
.+++.-+..|.--.. .++++|-| .+..+.-..++++ .=-.-.++++|++..-.....-+|.+-+-+|+.|...
T Consensus 260 gvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG--~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~a 337 (440)
T KOG1394|consen 260 GVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDG--AGAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAA 337 (440)
T ss_pred eEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCc--chHHHHHHHHHHHcCCChhhcCeeecccccCcCchHH
Confidence 455556666643221 34666554 4444433334433 2234566777765432222345888888899999888
Q ss_pred ChhHHHHHHHHhCCEE
Q 037144 251 PLKPLCDVAKQFGIWV 266 (502)
Q Consensus 251 pl~eI~~i~~~~g~~l 266 (502)
+..+|..+..++....
T Consensus 338 E~~Ai~~vf~~~~~~~ 353 (440)
T KOG1394|consen 338 EAEAIKRVFGEHNIAS 353 (440)
T ss_pred HHHHHHHHhccCCccc
Confidence 8888888877776543
No 456
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=32.97 E-value=1.9e+02 Score=24.28 Aligned_cols=62 Identities=15% Similarity=0.078 Sum_probs=40.3
Q ss_pred CchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHH
Q 037144 184 THCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCD 257 (502)
Q Consensus 184 ~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~ 257 (502)
..+.+...++.+|. ++....+-++ |.+++++++.+..++. =++++.|.+..|..|-..+..+
T Consensus 20 n~~~l~~~l~~~G~---~v~~~~~v~D-----d~~~i~~~i~~~~~~~----DlvittGG~g~g~~D~t~~ai~ 81 (133)
T cd00758 20 NGPALEALLEDLGC---EVIYAGVVPD-----DADSIRAALIEASREA----DLVLTTGGTGVGRRDVTPEALA 81 (133)
T ss_pred hHHHHHHHHHHCCC---EEEEeeecCC-----CHHHHHHHHHHHHhcC----CEEEECCCCCCCCCcchHHHHH
Confidence 44456666778888 8887765432 6788888887654321 2455556678888887766544
No 457
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=32.97 E-value=3.8e+02 Score=25.73 Aligned_cols=68 Identities=19% Similarity=0.211 Sum_probs=42.8
Q ss_pred hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHh
Q 037144 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQF 262 (502)
Q Consensus 187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~ 262 (502)
.+.+.++..|+ ..+.+-.. .-+.+.|++..+.. .| +|....-+-.||+-++ ++++.+-.|++
T Consensus 138 ~~~~~~~~~gi---~~I~lvaP-----tt~~~rl~~i~~~a--~G----FiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~ 203 (265)
T COG0159 138 ELLKAAEKHGI---DPIFLVAP-----TTPDERLKKIAEAA--SG----FIYYVSRMGVTGARNPVSADVKELVKRVRKY 203 (265)
T ss_pred HHHHHHHHcCC---cEEEEeCC-----CCCHHHHHHHHHhC--CC----cEEEEecccccCCCcccchhHHHHHHHHHHh
Confidence 47888898999 77776543 23556666665433 23 4444444556787766 66666666665
Q ss_pred -CCEEEe
Q 037144 263 -GIWVHV 268 (502)
Q Consensus 263 -g~~lhV 268 (502)
++++.|
T Consensus 204 ~~~Pv~v 210 (265)
T COG0159 204 TDVPVLV 210 (265)
T ss_pred cCCCeEE
Confidence 566665
No 458
>PRK08643 acetoin reductase; Validated
Probab=32.80 E-value=3.7e+02 Score=24.91 Aligned_cols=44 Identities=14% Similarity=0.107 Sum_probs=26.9
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+| --|.+.+++.+++..++...+-.|+.++|....+.+
T Consensus 52 ~~~~~~~D-----l~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~ 95 (256)
T PRK08643 52 KAIAVKAD-----VSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPI 95 (256)
T ss_pred eEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 67777776 347788888887655432234466666665444333
No 459
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=32.75 E-value=2.2e+02 Score=23.79 Aligned_cols=61 Identities=15% Similarity=0.126 Sum_probs=39.3
Q ss_pred CchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHH
Q 037144 184 THCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLC 256 (502)
Q Consensus 184 ~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~ 256 (502)
..+.+.+.++.+|. +++...+-++ |.+.+++.+.+..+. .-+| ++.|.+..|..|-..+..
T Consensus 19 ~~~~l~~~l~~~G~---~~~~~~~v~D-----d~~~I~~~l~~~~~~---~dli-ittGG~g~g~~D~t~~~l 79 (135)
T smart00852 19 NGPALAELLTELGI---EVTRYVIVPD-----DKEAIKEALREALER---ADLV-ITTGGTGPGPDDVTPEAV 79 (135)
T ss_pred cHHHHHHHHHHCCC---eEEEEEEeCC-----CHHHHHHHHHHHHhC---CCEE-EEcCCCCCCCCcCcHHHH
Confidence 44566777888898 7766655432 678888888765542 1244 444555678888777654
No 460
>PRK00724 formate dehydrogenase accessory protein; Reviewed
Probab=32.61 E-value=1.9e+02 Score=27.80 Aligned_cols=73 Identities=22% Similarity=0.277 Sum_probs=45.9
Q ss_pred eEEEeCCCC-chhHHHHHHH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC
Q 037144 176 LVVYSSDQT-HCAFQKAAQI---VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP 251 (502)
Q Consensus 176 ~~v~~s~~~-H~s~~~aa~~---~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp 251 (502)
.+++.-+.+ |.+++|++-. -|+..++...+- .|++..|-+.|++... .|.+|..+++|+.
T Consensus 171 ~l~~~EDIGRHNAvDKviG~all~g~~~~~~~l~~-----SGR~s~emv~Ka~~aG-----ipvivS~saPT~l------ 234 (263)
T PRK00724 171 LLAVREDVGRHNALDKLIGAALRAGIPLRDGALLV-----SGRASSEMVQKAAMAG-----IPILVAVSAPTSL------ 234 (263)
T ss_pred EEEEEecCchhHHHHHHHHHHHHcCCCccCcEEEE-----eCCchHHHHHHHHHcC-----CcEEEEcccchHH------
Confidence 333433333 9999997643 255433333332 3599999999887653 3666655555533
Q ss_pred hhHHHHHHHHhCCEEE
Q 037144 252 LKPLCDVAKQFGIWVH 267 (502)
Q Consensus 252 l~eI~~i~~~~g~~lh 267 (502)
=.++|+++|+-|+
T Consensus 235 ---AVelA~~~giTLi 247 (263)
T PRK00724 235 ---AVELAEELGLTLV 247 (263)
T ss_pred ---HHHHHHHhCCEEE
Confidence 3899999999876
No 461
>PF03599 CdhD: CO dehydrogenase/acetyl-CoA synthase delta subunit; InterPro: IPR016041 This entry represents a conserved region predicted to form a TIM alpha/beta barrel, and is found in the delta subunit of a number of CO dehydrogenase/acetyl-CoA synthase enzymes.; PDB: 2H9A_B 2YCL_B 4DJF_E 4DJD_C 4DJE_C.
Probab=32.53 E-value=1.4e+02 Score=30.26 Aligned_cols=44 Identities=25% Similarity=0.329 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEee
Q 037144 216 SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVD 269 (502)
Q Consensus 216 d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVD 269 (502)
|++.|+++++.. ++++|++-.+|. ++.++++++|++||..+.+=
T Consensus 107 D~evl~aale~~--~~~kpLL~aAt~--------eNyk~m~~lA~~y~~pl~v~ 150 (386)
T PF03599_consen 107 DPEVLKAALEAC--AGKKPLLYAATE--------ENYKAMAALAKEYGHPLIVS 150 (386)
T ss_dssp HHHHHHHHHHHT--TTS--EEEEEBT--------TTHHHHHHHHHHCT-EEEEE
T ss_pred CHHHHHHHHHHh--CcCCcEEeEcCH--------HHHHHHHHHHHHcCCeEEEE
Confidence 788888887654 445676655543 57888888888888887763
No 462
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=32.41 E-value=2.8e+02 Score=25.82 Aligned_cols=101 Identities=14% Similarity=0.137 Sum_probs=59.4
Q ss_pred EEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC-----c----hhHHHHHHHcCCCCCCEEEEecCCCCCc
Q 037144 143 GVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT-----H----CAFQKAAQIVGIDRKNIRAIKTTKSSSY 213 (502)
Q Consensus 143 g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~-----H----~s~~~aa~~~Glg~~~v~~v~~~~~~~~ 213 (502)
..+-|||..+++. +..|... |.+ ....+.+.++.. | -.....|+.+|+ .++...++. ..
T Consensus 4 ~aL~SGGKDS~~A-l~~a~~~-----G~e-V~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi---~l~~~~~~g--~~ 71 (223)
T COG2102 4 IALYSGGKDSFYA-LYLALEE-----GHE-VVYLLTVKPENGDSYMFHTPNLELAELQAEAMGI---PLVTFDTSG--EE 71 (223)
T ss_pred EEEEecCcHHHHH-HHHHHHc-----CCe-eEEEEEEecCCCCeeeeeccchHHHHHHHHhcCC---ceEEEecCc--cc
Confidence 5677899999754 4444331 111 122233333332 3 234556788899 888888764 22
Q ss_pred ccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---CChhHHHHHHHHhCCEEE
Q 037144 214 GLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---DPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 214 ~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---dpl~eI~~i~~~~g~~lh 267 (502)
.-..++|.++|..-.-. .| .+|++ +-...+-.+|++.|+-..
T Consensus 72 e~eve~L~~~l~~l~~d-----~i-------v~GaI~s~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 72 EREVEELKEALRRLKVD-----GI-------VAGAIASEYQKERVERLCEELGLKVY 116 (223)
T ss_pred hhhHHHHHHHHHhCccc-----EE-------EEchhhhHHHHHHHHHHHHHhCCEEe
Confidence 45678888888764321 12 24555 446678888999887644
No 463
>PF10022 DUF2264: Uncharacterized protein conserved in bacteria (DUF2264); InterPro: IPR016624 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=32.10 E-value=3.7e+02 Score=27.17 Aligned_cols=125 Identities=15% Similarity=0.212 Sum_probs=74.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCC---CCCCC-----CCchhHh----------hcC----CCCCCCCCCCHHHHHHH
Q 037144 5 YAQEFRRQGHMFVDFMAEYYKNIDKY---PVRSQ-----VEPGYLK----------KRL----PESAPYSPESVETILQD 62 (502)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~l~----------~~~----~~~~p~~~~~~~~il~~ 62 (502)
|.+.+.++++++++-+..|+..-..+ |..+. ...+.|+ -.+ +..-++.+....++.+.
T Consensus 2 tR~~w~~~~~~ll~p~~~~~s~~~~~~~~P~~~~a~~~~~~a~~LEgfaR~l~g~ap~l~~~~~~~~~~~~~~~~~~~~~ 81 (361)
T PF10022_consen 2 TRADWVEALDKLLEPLLPYLSPGGARIRMPGESGAHYDRKAADYLEGFARPLWGAAPWLAGGGEDDDTEEGKLREKLREL 81 (361)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCcCCcCcchhHHHHHHHHHHHHHHHHHhcCCCcCcccccccHHHHHHH
Confidence 56788889999999999998764432 32221 1112122 011 12234456667788888
Q ss_pred HHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCC
Q 037144 63 VQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLP 132 (502)
Q Consensus 63 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~ 132 (502)
..+-+..+. .+.||.|+++........-..+.+....+-....-|. |....-.+.+++||.+.-+..
T Consensus 82 ~~~gi~~Gt-dP~spdyw~~~~~~dQ~~VEaa~la~aL~~a~~~lW~--~L~~~~k~~l~~wL~~~~~~~ 148 (361)
T PF10022_consen 82 YRKGIANGT-DPKSPDYWGFIGDYDQRLVEAASLALALLRAPEWLWD--PLDEEEKENLVDWLKQIRGIK 148 (361)
T ss_pred HHHHHHhcC-CCCCccccCCcccchhhHhHHHHHHHHHHHCHHHHHh--hCCHHHHHHHHHHHHhcCcCC
Confidence 888776664 5589999998765433333333333333323222333 445666778999999887653
No 464
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=31.91 E-value=4.2e+02 Score=25.95 Aligned_cols=100 Identities=19% Similarity=0.218 Sum_probs=61.8
Q ss_pred CcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh-----HHHHHHHcCCCCCCEEEEecCCCCCccc
Q 037144 141 GGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-----FQKAAQIVGIDRKNIRAIKTTKSSSYGL 215 (502)
Q Consensus 141 ~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-----~~~aa~~~Glg~~~v~~v~~~~~~~~~~ 215 (502)
+..++|.|-|.+.+..+..|++.. .+..||+.+ +++. ..|..+..|+ .+..|+-
T Consensus 120 g~~IlTh~~S~~v~~~l~~A~~~~---------k~~~V~VtE-SRP~~eG~~~ak~L~~~gI---~~~~I~D-------- 178 (301)
T COG1184 120 GDVILTHSFSKTVLEVLKTAADRG---------KRFKVIVTE-SRPRGEGRIMAKELRQSGI---PVTVIVD-------- 178 (301)
T ss_pred CCEEEEecCcHHHHHHHHHhhhcC---------CceEEEEEc-CCCcchHHHHHHHHHHcCC---ceEEEec--------
Confidence 468999999988888888887741 345677654 3332 3455566788 7777761
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-CCh--hHHHHHHHHhCCEEEee
Q 037144 216 SAESVLSQINLDVEAELIPLFLCATVGTTAITAV-DPL--KPLCDVAKQFGIWVHVD 269 (502)
Q Consensus 216 d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-dpl--~eI~~i~~~~g~~lhVD 269 (502)
.++-..+++..+ +++...+-...|.+ +.+ --|+..|++.+.++.|=
T Consensus 179 --sa~~~~~~~vd~------VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~ 227 (301)
T COG1184 179 --SAVGAFMSRVDK------VLVGADAILANGALVNKIGTSPLALAARELRVPFYVV 227 (301)
T ss_pred --hHHHHHHHhCCE------EEECccceecCCcEEeccchHHHHHHHHHhCCCEEEE
Confidence 233444444332 45555444444433 333 35777889999988774
No 465
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=31.88 E-value=95 Score=30.26 Aligned_cols=52 Identities=12% Similarity=0.203 Sum_probs=37.4
Q ss_pred CCcccCHHHHHHHHHHHHhcC-CccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144 211 SSYGLSAESVLSQINLDVEAE-LIPLFLCATVGTTAITAVDPLKPLCDVAKQF 262 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g-~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~ 262 (502)
.++++|.+.+++.++...+.| -.-+++..+.|....=..+.-.++.+.+.+.
T Consensus 14 ~dg~iD~~~~~~~i~~~i~~G~v~gi~~~GstGE~~~Lt~eEr~~~~~~~~~~ 66 (290)
T TIGR00683 14 EDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDE 66 (290)
T ss_pred CCCCcCHHHHHHHHHHHHhCCCcCEEEECCcccccccCCHHHHHHHHHHHHHH
Confidence 356999999999999888777 5555666666666665666666777766554
No 466
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=31.87 E-value=1.1e+02 Score=28.34 Aligned_cols=46 Identities=13% Similarity=0.048 Sum_probs=33.5
Q ss_pred HHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144 220 VLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV 266 (502)
Q Consensus 220 Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l 266 (502)
-|..++=.+-+|..|..|++-.- +..|..-..+++.++|++||+.+
T Consensus 155 TEaavdLa~lAGl~p~~vicEil-~~dG~ma~~~~l~~fA~~h~l~~ 200 (218)
T PRK00910 155 TEGTVDLMQMAGLQPAGVLCELT-NPDGTMAKTPEIIAFGKLHNMPV 200 (218)
T ss_pred cHHHHHHHHHcCCCceEEEEEEe-cCCCCcCCHHHHHHHHHHcCCcE
Confidence 34445444556777877666663 35688999999999999999887
No 467
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=31.84 E-value=86 Score=30.45 Aligned_cols=52 Identities=10% Similarity=0.227 Sum_probs=38.0
Q ss_pred CCcccCHHHHHHHHHHHHhc-CCccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144 211 SSYGLSAESVLSQINLDVEA-ELIPLFLCATVGTTAITAVDPLKPLCDVAKQF 262 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~-g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~ 262 (502)
.++.+|.+.+++.++...+. |-.-+++..+.|....=..+.-.++.+.+.+.
T Consensus 14 ~dg~iD~~~~~~~i~~l~~~~Gv~gi~~~GstGE~~~Lt~~Er~~~~~~~~~~ 66 (288)
T cd00954 14 ENGEINEDVLRAIVDYLIEKQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAEA 66 (288)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCEEEECcCCcCcccCCHHHHHHHHHHHHHH
Confidence 35799999999999988887 76666666666666665566666777766553
No 468
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff.
Probab=31.82 E-value=6.1e+02 Score=26.44 Aligned_cols=122 Identities=20% Similarity=0.174 Sum_probs=64.1
Q ss_pred hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe---CCCCch----
Q 037144 114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS---SDQTHC---- 186 (502)
Q Consensus 114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~---s~~~H~---- 186 (502)
..+++..+.+.+++.+..+.. -|++.|||-.+.+.+..+++.. . + .+...++ .....+
T Consensus 235 ~e~l~~~l~~aV~~r~~~~~~-------vg~~LSGGlDSs~iaa~a~~~~--~----~--~~~~~~t~~~~~~~~~~E~~ 299 (467)
T TIGR01536 235 VDELRSLLEDAVKRRLVADVP-------VGVLLSGGLDSSLVAAIARREA--P----R--GPVHTFSIGFEGSPDFDESP 299 (467)
T ss_pred HHHHHHHHHHHHHHHhccCCc-------eEEEecCChhHHHHHHHHHHhc--C----C--CCceEEEEecCCCCCCChHH
Confidence 345666666666665543332 4788899988876655444321 0 0 1222222 111111
Q ss_pred hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV 266 (502)
Q Consensus 187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l 266 (502)
-..+.|+.+|+ +...+.+++ +++.+.+.+.......|+. ....-+.-.+.+.++++|+.+
T Consensus 300 ~A~~vA~~lg~---~~~~i~~~~--------~~~~~~~~~~v~~~~~p~~---------~~~~~~~~~l~~~a~~~G~~v 359 (467)
T TIGR01536 300 YARKVADHLGT---EHHEVLFSV--------EEGLDALPEVIYHLEDPTT---------IRASIPLYLLSKLAREDGVKV 359 (467)
T ss_pred HHHHHHHHhCC---cCeEEECCH--------HHHHHHHHHHHHhhCCCCC---------CchHHHHHHHHHHHHhcCCEE
Confidence 34567888999 888887653 2233333322211112221 112224556788889999988
Q ss_pred Eeec
Q 037144 267 HVDA 270 (502)
Q Consensus 267 hVDa 270 (502)
+.+|
T Consensus 360 lltG 363 (467)
T TIGR01536 360 VLSG 363 (467)
T ss_pred EEec
Confidence 8876
No 469
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=31.78 E-value=2.7e+02 Score=23.71 Aligned_cols=62 Identities=13% Similarity=0.149 Sum_probs=40.3
Q ss_pred CchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHH
Q 037144 184 THCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCD 257 (502)
Q Consensus 184 ~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~ 257 (502)
.-+.+....+.+|. ++..+.+-.+ |.+.|.++|.+..++ .-+|+.| |.+..|..|-..+..+
T Consensus 28 n~~~l~~~l~~~G~---~v~~~~~v~D-----d~~~i~~~l~~~~~~---~DliItt-GG~g~g~~D~t~~ai~ 89 (144)
T TIGR00177 28 NGPLLAALLEEAGF---NVSRLGIVPD-----DPEEIREILRKAVDE---ADVVLTT-GGTGVGPRDVTPEALE 89 (144)
T ss_pred cHHHHHHHHHHCCC---eEEEEeecCC-----CHHHHHHHHHHHHhC---CCEEEEC-CCCCCCCCccHHHHHH
Confidence 44566777788898 8887776543 677888888765432 1244444 6667777777666544
No 470
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=31.72 E-value=2.4e+02 Score=27.59 Aligned_cols=55 Identities=16% Similarity=0.146 Sum_probs=30.7
Q ss_pred EEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch-hHHHHHHHcCCCCCCEEEEec
Q 037144 143 GVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC-AFQKAAQIVGIDRKNIRAIKT 207 (502)
Q Consensus 143 g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~-s~~~aa~~~Glg~~~v~~v~~ 207 (502)
.+++.|+|.+|...-.++.-+.+ | -+..|+++..... ......+.+|. +++.++-
T Consensus 58 ~vv~~g~ssGN~g~alA~~a~~~---G----~~~~ivvp~~~~~~~~~~~~~~~Ga---~v~~v~~ 113 (311)
T TIGR01275 58 TVITVGAIQSNHARATALAAKKL---G----LDAVLVLREKEELNGNLLLDKLMGA---ETRVYSA 113 (311)
T ss_pred EEEEcCCchhHHHHHHHHHHHHh---C----CceEEEecCCccCCCCHHHHHHcCC---EEEEECc
Confidence 57788777777532222211111 1 2466777763322 23344688999 9988874
No 471
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=31.61 E-value=3.3e+02 Score=23.18 Aligned_cols=47 Identities=19% Similarity=0.077 Sum_probs=34.4
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCCh
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPL 252 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl 252 (502)
++..+++|- -+.+.+++.+++..+.....-+++.++|....+.++++
T Consensus 53 ~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~ 99 (167)
T PF00106_consen 53 KITFIECDL-----SDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDL 99 (167)
T ss_dssp EEEEEESET-----TSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGS
T ss_pred ccccccccc-----cccccccccccccccccccccccccccccccccccccc
Confidence 889999873 37889999888776444445577777877777777665
No 472
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=31.43 E-value=1.1e+02 Score=28.54 Aligned_cols=45 Identities=18% Similarity=0.065 Sum_probs=31.7
Q ss_pred HHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144 221 LSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV 266 (502)
Q Consensus 221 e~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l 266 (502)
|..++=..-.|..|..|++.. -+..|..-..+++.++|++||+.+
T Consensus 160 EAavdLa~lAGl~P~~vicEi-l~~dG~ma~~~~l~~fA~~~~l~i 204 (230)
T PRK00014 160 EGSVDLAALAGLRPAGVLCEL-MNADGTMMRGASLERYAAKEGLVA 204 (230)
T ss_pred HHHHHHHHHcCCCceEEEEEE-eCCCCCccCHHHHHHHHHHcCCcE
Confidence 444443444666676666665 345688889999999999999887
No 473
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=31.42 E-value=4.3e+02 Score=24.53 Aligned_cols=60 Identities=17% Similarity=-0.033 Sum_probs=31.4
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT 244 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt 244 (502)
.|++.........+.....+- ++..+.+| --|.+.+++++++..+.-..+-+++-+++..
T Consensus 32 ~v~~~~r~~~~~~~~~~~~~~---~~~~~~~D-----~~~~~~~~~~~~~~~~~~~~id~li~~ag~~ 91 (257)
T PRK07067 32 RVVIADIKPARARLAALEIGP---AAIAVSLD-----VTRQDSIDRIVAAAVERFGGIDILFNNAALF 91 (257)
T ss_pred EEEEEcCCHHHHHHHHHHhCC---ceEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 343333333334444444444 67777776 3477788887776443322344555555543
No 474
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=31.35 E-value=5.1e+02 Score=25.35 Aligned_cols=83 Identities=16% Similarity=0.035 Sum_probs=39.6
Q ss_pred cEEEcCCch-HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHH
Q 037144 142 GGVIQGTTC-EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESV 220 (502)
Q Consensus 142 ~g~~t~ggt-~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~L 220 (502)
-+++|+||+ .+-.+|+..|+. +-.+++.+-......+-.-...+.| ++....+|-. +.+++
T Consensus 40 ~vLITGgg~GlGr~ialefa~r-----------g~~~vl~Din~~~~~etv~~~~~~g--~~~~y~cdis-----~~eei 101 (300)
T KOG1201|consen 40 IVLITGGGSGLGRLIALEFAKR-----------GAKLVLWDINKQGNEETVKEIRKIG--EAKAYTCDIS-----DREEI 101 (300)
T ss_pred EEEEeCCCchHHHHHHHHHHHh-----------CCeEEEEeccccchHHHHHHHHhcC--ceeEEEecCC-----CHHHH
Confidence 356677665 344555555543 2234444544443333333333334 6777777642 45555
Q ss_pred HHHHHHHHhcCCccEEEEEecC
Q 037144 221 LSQINLDVEAELIPLFLCATVG 242 (502)
Q Consensus 221 e~~i~~~~~~g~~p~~Vv~t~g 242 (502)
.+..++-+++-..+.++|-++|
T Consensus 102 ~~~a~~Vk~e~G~V~ILVNNAG 123 (300)
T KOG1201|consen 102 YRLAKKVKKEVGDVDILVNNAG 123 (300)
T ss_pred HHHHHHHHHhcCCceEEEeccc
Confidence 5544443332223444444444
No 475
>PRK07062 short chain dehydrogenase; Provisional
Probab=31.14 E-value=4.3e+02 Score=24.64 Aligned_cols=40 Identities=13% Similarity=-0.067 Sum_probs=24.1
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~ 245 (502)
++..+++| -.|.+.+++++++..+.-..+-.++-++|...
T Consensus 60 ~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~ 99 (265)
T PRK07062 60 RLLAARCD-----VLDEADVAAFAAAVEARFGGVDMLVNNAGQGR 99 (265)
T ss_pred eEEEEEec-----CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 67777776 34778888877765433222335666666543
No 476
>PRK05867 short chain dehydrogenase; Provisional
Probab=31.03 E-value=4.2e+02 Score=24.58 Aligned_cols=40 Identities=8% Similarity=-0.078 Sum_probs=23.1
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~ 245 (502)
++..+.+| -.|.+.+++++++..+.-..+-+++.++|...
T Consensus 59 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~ 98 (253)
T PRK05867 59 KVVPVCCD-----VSQHQQVTSMLDQVTAELGGIDIAVCNAGIIT 98 (253)
T ss_pred eEEEEEcc-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 67777776 34777888777654433222345666665433
No 477
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=30.86 E-value=3.2e+02 Score=28.24 Aligned_cols=58 Identities=14% Similarity=0.145 Sum_probs=33.6
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH---hCCEEEeeccccc
Q 037144 216 SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ---FGIWVHVDAAYAG 274 (502)
Q Consensus 216 d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~---~g~~lhVDaA~g~ 274 (502)
+++++.++|.........-++++=|.|.+.. ..+-++++.++.++ +...|++|++...
T Consensus 304 d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~k-d~~lm~EL~~~lk~~~PdevlLVLsATtk~ 364 (436)
T PRK11889 304 DEAAMTRALTYFKEEARVDYILIDTAGKNYR-ASETVEEMIETMGQVEPDYICLTLSASMKS 364 (436)
T ss_pred CHHHHHHHHHHHHhccCCCEEEEeCccccCc-CHHHHHHHHHHHhhcCCCeEEEEECCccCh
Confidence 5677888876544311224567777776552 22335666666554 4567888876544
No 478
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=30.84 E-value=4.2e+02 Score=24.20 Aligned_cols=69 Identities=19% Similarity=0.189 Sum_probs=38.2
Q ss_pred EEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCC-CchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHH
Q 037144 144 VIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQ-THCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLS 222 (502)
Q Consensus 144 ~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~-~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~ 222 (502)
+++++| +|+.|+.-+... +.- ....+.++|+. .=+..++| +..|+ ....+.... .-+-+++++
T Consensus 6 laSG~G--SNlqaiida~~~-----~~~-~a~i~~Visd~~~A~~lerA-~~~gI---pt~~~~~k~----~~~r~~~d~ 69 (200)
T COG0299 6 LASGNG--SNLQAIIDAIKG-----GKL-DAEIVAVISDKADAYALERA-AKAGI---PTVVLDRKE----FPSREAFDR 69 (200)
T ss_pred EEeCCc--ccHHHHHHHHhc-----CCC-CcEEEEEEeCCCCCHHHHHH-HHcCC---CEEEecccc----CCCHHHHHH
Confidence 344444 588888776542 100 12355556655 34555555 66888 666666543 225666776
Q ss_pred HHHHHH
Q 037144 223 QINLDV 228 (502)
Q Consensus 223 ~i~~~~ 228 (502)
.|.+..
T Consensus 70 ~l~~~l 75 (200)
T COG0299 70 ALVEAL 75 (200)
T ss_pred HHHHHH
Confidence 665544
No 479
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=30.80 E-value=1.2e+02 Score=28.11 Aligned_cols=49 Identities=14% Similarity=0.099 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144 218 ESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 218 ~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh 267 (502)
-+-|..++=.+-.|..|..|++-.- +..|..-..+++.++|++||+.++
T Consensus 152 GHTEaavdLa~lAGl~p~~vicEil-~~dG~ma~~~~~~~fA~~~~l~~i 200 (214)
T PRK01792 152 GHTEAAVDLARLAGYKEAGVICEIT-NDDGTMARTPEIVEFAKKFGYAVV 200 (214)
T ss_pred ChHHHHHHHHHHcCCCceEEEEEEe-cCCCCccCHHHHHHHHHHcCCcEE
Confidence 3455666555567777877776663 466889999999999999999873
No 480
>PF12162 STAT1_TAZ2bind: STAT1 TAZ2 binding domain; InterPro: IPR022752 This entry represents the C-terminal domain of STAT1, which selectively binds the TAZ2 domain of CRB (CREB-binding protein) []. This group of eukaryotic proteins is approximately 20 amino acids in length, and is found in association with PF02865 from PFAM, PF00017 from PFAM, PF01017 from PFAM, PF02864 from PFAM. By binding to CRB, it becomes a transcriptional activator and can initiate transcription of certain genes. ; GO: 0003700 sequence-specific DNA binding transcription factor activity; PDB: 2KA6_B.
Probab=30.72 E-value=54 Score=18.47 Aligned_cols=14 Identities=7% Similarity=0.140 Sum_probs=8.2
Q ss_pred CCccCHHHHHHHHH
Q 037144 1 MDQAYAQEFRRQGH 14 (502)
Q Consensus 1 ~~~~~~~~~~~~~~ 14 (502)
|-||++|+|+++-+
T Consensus 7 mmPMSPddy~~l~~ 20 (23)
T PF12162_consen 7 MMPMSPDDYDELER 20 (23)
T ss_dssp ---S-HHHHHHHHH
T ss_pred ccCCCHHHHHHHHH
Confidence 35899999997654
No 481
>PF09106 SelB-wing_2: Elongation factor SelB, winged helix ; InterPro: IPR015190 This entry represents a domain with a winged helix-type fold, which consists of a closed 3-helical bundle with a right-handed twist, and a small beta-sheet wing []. Different winged helix domains share a common structure, but can differ in sequence. This entry is designated "type 2". The winged helix motif is involved in both DNA and RNA binding. In the elongation factor SelB, the winged helix domains recognise RNA, allowing the complex to wrap around the small ribosomal subunit. In bacteria, the incorporation of the amino acid selenocysteine into proteins requires elongation factor SelB, which binds both transfer RNA (tRNA) and mRNA. SelB binds to an mRNA hairpin formed by the selenocysteine insertion sequence (SECIS) with extremely high specificity []. ; GO: 0003723 RNA binding, 0003746 translation elongation factor activity, 0005525 GTP binding, 0001514 selenocysteine incorporation, 0005737 cytoplasm; PDB: 2V9V_A 1LVA_A 2PLY_A 2UWM_A.
Probab=30.70 E-value=84 Score=22.24 Aligned_cols=46 Identities=22% Similarity=0.430 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCchhHhhcCCC-CCCCCCCCHHHHHHHHHHh
Q 037144 16 FVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPE-SAPYSPESVETILQDVQEH 66 (502)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~p~~~~~~~~il~~~~~~ 66 (502)
+++.+.+|.+. .|--+.+..++|++.+.. .+|. ..++.+++.+.+.
T Consensus 1 i~~~L~~yH~~---~Plr~G~~keeLrsrl~~~~l~~--k~~~~ll~~l~~~ 47 (59)
T PF09106_consen 1 ILEILAEYHRE---NPLRPGMPKEELRSRLFKPRLPP--KLFNALLEALVAE 47 (59)
T ss_dssp -HHHHHHHHHH----TTSS-EEHHHHHHHCST-TS-H--CCHHHHHHHHHHT
T ss_pred ChHHHHHHHHH---CcCccCcCHHHHHHHHhhccCCH--HHHHHHHHHHHHC
Confidence 35677888877 455568889999988866 6665 5788888887753
No 482
>PRK11633 cell division protein DedD; Provisional
Probab=30.11 E-value=2e+02 Score=26.85 Aligned_cols=49 Identities=12% Similarity=0.253 Sum_probs=35.6
Q ss_pred HHHHHHHHHhcCcE-EEEeee-ECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 448 NRELLESINVSGKV-FMTHAI-VGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 448 ~~~l~~~l~~~g~~-~~~~~~-~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
...|.++|...|.- |+.... ..| .+.|+-+ ++..++++.+++...|+++
T Consensus 163 A~~l~~kL~~~G~~Ay~~~~~~~~G-~~tRV~V-GP~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 163 VNEIVAKLRLSGYRVYTVPSTPVQG-KITRIYV-GPDASKDKLKGSLGELKQL 213 (226)
T ss_pred HHHHHHHHHHCCCeeEEEeeecCCC-cEEEEEe-CCCCCHHHHHHHHHHHHHh
Confidence 45788899999973 333222 234 4678876 4888899999999999886
No 483
>COG4019 Uncharacterized protein conserved in archaea [Function unknown]
Probab=29.73 E-value=1.6e+02 Score=24.57 Aligned_cols=86 Identities=16% Similarity=0.194 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE----EEeecccccccccCccc-hhhh-cCC
Q 037144 216 SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW----VHVDAAYAGSACICPEF-RHFI-DGV 289 (502)
Q Consensus 216 d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~----lhVDaA~g~~~~~~~~~-~~~~-~~~ 289 (502)
.++.+++.|....+ +||+ ++.-+.++.|-++.+++++. +-+|--++- .-.+|.. +.++ -.+
T Consensus 25 Eve~ireyi~sA~r------~vV~------t~N~~K~~aindvlrrf~l~Eaeml~~~T~~AD-lTrmPA~tKalmaldi 91 (156)
T COG4019 25 EVEKIREYIVSAKR------IVVA------TNNQKKFKAINDVLRRFCLAEAEMLDIDTRFAD-LTRMPALTKALMALDI 91 (156)
T ss_pred HHHHHHHHHhccce------EEEe------cCCHHHHHHHHHHHHHhccchHHHhcCccchhh-cccChHHHHHHHhccc
Confidence 44555555554432 4554 45568889999999988763 555544422 2233332 2222 257
Q ss_pred CCCCeeEEccCCcCCCCCcceEEEeeC
Q 037144 290 ECVDSFSFNPHKWLFTTLDCCCLWVKD 316 (502)
Q Consensus 290 ~~aDsi~~~~hK~l~~p~~~g~~~~r~ 316 (502)
++||.+..-+. +++|...+++.+-+
T Consensus 92 s~ADlvIARGR--LGvPGSGsmlVimD 116 (156)
T COG4019 92 SKADLVIARGR--LGVPGSGSMLVIMD 116 (156)
T ss_pred cCCcEEEeecc--ccCCCCCcEEEEEc
Confidence 89998876654 67886555555433
No 484
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=29.69 E-value=2.6e+02 Score=28.32 Aligned_cols=72 Identities=17% Similarity=0.154 Sum_probs=37.6
Q ss_pred EEEeCCCCchhHHHHHHH-cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHH
Q 037144 177 VVYSSDQTHCAFQKAAQI-VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPL 255 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~-~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI 255 (502)
.|++.+-......+.++. .+. ++..+.+| ..|.++|++.+++.. +|+-+.|.. --..|
T Consensus 25 ~v~va~r~~~~~~~~~~~~~~~---~~~~~~~d-----~~~~~~l~~~~~~~d-------vVin~~gp~------~~~~v 83 (386)
T PF03435_consen 25 EVTVADRNPEKAERLAEKLLGD---RVEAVQVD-----VNDPESLAELLRGCD-------VVINCAGPF------FGEPV 83 (386)
T ss_dssp EEEEEESSHHHHHHHHT--TTT---TEEEEE-------TTTHHHHHHHHTTSS-------EEEE-SSGG------GHHHH
T ss_pred cEEEEECCHHHHHHHHhhcccc---ceeEEEEe-----cCCHHHHHHHHhcCC-------EEEECCccc------hhHHH
Confidence 444433333333343332 344 88888887 347888999887652 455554443 12366
Q ss_pred HHHHHHhCCEEEeec
Q 037144 256 CDVAKQFGIWVHVDA 270 (502)
Q Consensus 256 ~~i~~~~g~~lhVDa 270 (502)
++.|-++|+. .||.
T Consensus 84 ~~~~i~~g~~-yvD~ 97 (386)
T PF03435_consen 84 ARACIEAGVH-YVDT 97 (386)
T ss_dssp HHHHHHHT-E-EEES
T ss_pred HHHHHHhCCC-eecc
Confidence 6677776653 4553
No 485
>PRK03353 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=29.56 E-value=1.3e+02 Score=28.02 Aligned_cols=49 Identities=20% Similarity=0.098 Sum_probs=36.6
Q ss_pred HHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeec
Q 037144 220 VLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDA 270 (502)
Q Consensus 220 Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDa 270 (502)
=|.+++=.+-.|..|..|++.. -+..|..-+.+++.++|++||+.+ ++.
T Consensus 154 tEaavdLa~lAgl~P~avi~ei-~~~~G~~~~~~~~~~fA~~~~l~~-v~i 202 (217)
T PRK03353 154 TEATIDLMTLAGLKPAGVLCEL-TNDDGTMARAPECIAFAKQHNMPV-LTI 202 (217)
T ss_pred hHHHHHHHHHcCCCceEEEEEe-ecCCCCcccHHHHHHHHHHcCCcE-EEH
Confidence 4555655556777887777765 335688999999999999999988 443
No 486
>PF05670 DUF814: Domain of unknown function (DUF814); InterPro: IPR008532 This domain occurs in proteins that have been annotated as Fibronectin/fibrinogen binding protein by similarity. This annotation comes from O34693 from SWISSPROT where the N-terminal region is involved in this activity []. Hence the activity of this C-terminal domain is unknown. This domain contains a conserved motif D/E-X-W/Y-X-H that may be functionally important.
Probab=29.22 E-value=38 Score=26.52 Aligned_cols=25 Identities=20% Similarity=0.284 Sum_probs=18.6
Q ss_pred hHH-HHHHHHhCCEEEeecccccccc
Q 037144 253 KPL-CDVAKQFGIWVHVDAAYAGSAC 277 (502)
Q Consensus 253 ~eI-~~i~~~~g~~lhVDaA~g~~~~ 277 (502)
+.| .++++..++|||+|..-|...+
T Consensus 20 e~L~~k~~~~~D~wfH~~~~pg~hvi 45 (90)
T PF05670_consen 20 EMLTKKYARPNDLWFHADDFPGPHVI 45 (90)
T ss_pred HHHHHHhhhhcceeEeccCCCCCEEE
Confidence 355 6788899999999976655544
No 487
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=29.06 E-value=2.4e+02 Score=25.98 Aligned_cols=76 Identities=16% Similarity=0.154 Sum_probs=42.9
Q ss_pred CeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhH
Q 037144 175 KLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKP 254 (502)
Q Consensus 175 ~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~e 254 (502)
..++++.+. .....+..+..|+ .++..+.+ |.+.|.++++... .|+...+.+.....+--..
T Consensus 24 ~V~~l~R~~-~~~~~~~l~~~g~---~vv~~d~~-------~~~~l~~al~g~d-------~v~~~~~~~~~~~~~~~~~ 85 (233)
T PF05368_consen 24 SVRALVRDP-SSDRAQQLQALGA---EVVEADYD-------DPESLVAALKGVD-------AVFSVTPPSHPSELEQQKN 85 (233)
T ss_dssp CEEEEESSS-HHHHHHHHHHTTT---EEEES-TT--------HHHHHHHHTTCS-------EEEEESSCSCCCHHHHHHH
T ss_pred CcEEEEecc-chhhhhhhhcccc---eEeecccC-------CHHHHHHHHcCCc-------eEEeecCcchhhhhhhhhh
Confidence 445555443 3333344455677 66543322 8899999997533 3444444433444455678
Q ss_pred HHHHHHHhCCEEEe
Q 037144 255 LCDVAKQFGIWVHV 268 (502)
Q Consensus 255 I~~i~~~~g~~lhV 268 (502)
|.+.|++.|+..+|
T Consensus 86 li~Aa~~agVk~~v 99 (233)
T PF05368_consen 86 LIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHHT-SEEE
T ss_pred HHHhhhccccceEE
Confidence 88899999876555
No 488
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=28.99 E-value=2.8e+02 Score=26.77 Aligned_cols=78 Identities=18% Similarity=0.084 Sum_probs=48.4
Q ss_pred ccCHHHHHHHHHHHHhcC-CccEEEEEecCCccccccCChhHHHHHHHHhCC--EEEe-ecccccccccCccchhhhcCC
Q 037144 214 GLSAESVLSQINLDVEAE-LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI--WVHV-DAAYAGSACICPEFRHFIDGV 289 (502)
Q Consensus 214 ~~d~~~Le~~i~~~~~~g-~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~--~lhV-DaA~g~~~~~~~~~~~~~~~~ 289 (502)
.+|+++.+..++.-...+ ..++.+++ .|+-|.++--.+|+.+.+++.. .+.| +-|.+++.+.+-
T Consensus 71 ~I~i~dse~v~raI~~~~~~~~IdLii---~TpGG~v~AA~~I~~~l~~~~~~v~v~VP~~A~SAGTlIAL--------- 138 (285)
T PF01972_consen 71 YIDIDDSEFVLRAIREAPKDKPIDLII---HTPGGLVDAAEQIARALREHPAKVTVIVPHYAMSAGTLIAL--------- 138 (285)
T ss_pred eEcHhhHHHHHHHHHhcCCCCceEEEE---ECCCCcHHHHHHHHHHHHhCCCCEEEEECcccccHHHHHHH---------
Confidence 445444444443322221 23444443 5788999999999999998854 3333 556666655431
Q ss_pred CCCCeeEEccCCcCC
Q 037144 290 ECVDSFSFNPHKWLF 304 (502)
Q Consensus 290 ~~aDsi~~~~hK~l~ 304 (502)
.||-+..+++-.+|
T Consensus 139 -aADeIvM~p~a~LG 152 (285)
T PF01972_consen 139 -AADEIVMGPGAVLG 152 (285)
T ss_pred -hCCeEEECCCCccC
Confidence 67888888887775
No 489
>PF01645 Glu_synthase: Conserved region in glutamate synthase; InterPro: IPR002932 Ferredoxin-dependent glutamate synthases have been implicated in a number of functions including photorespiration in Arabidopsis where they may also play a role in primary nitrogen assimilation in roots []. This region is expressed as a seperate subunit in the glutamate synthase alpha subunit from archaebacteria, or part of a large multidomain enzyme in other organisms. The aligned region of these proteins contains a putative FMN binding site and Fe-S cluster.; GO: 0015930 glutamate synthase activity, 0016638 oxidoreductase activity, acting on the CH-NH2 group of donors, 0006537 glutamate biosynthetic process, 0055114 oxidation-reduction process; PDB: 1EA0_A 2VDC_E 1OFE_A 1LLW_A 1OFD_A 1LLZ_A 1LM1_A.
Probab=28.83 E-value=3.6e+02 Score=27.34 Aligned_cols=79 Identities=16% Similarity=0.092 Sum_probs=42.7
Q ss_pred HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC-CccEEEEEecCCccccccCChhHHHHHHHHhCC-E
Q 037144 188 FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE-LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI-W 265 (502)
Q Consensus 188 ~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g-~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~-~ 265 (502)
-.+.+++.++....-...|... ...-++++|.+.|.+-++.+ ..|+.|=+.. -++++.++..+.+.++ .
T Consensus 160 ~~~ia~~R~~~~g~~~iSP~~h--~di~s~edl~~~I~~Lr~~~~~~pVgvKl~~-------~~~~~~~~~~~~~ag~D~ 230 (368)
T PF01645_consen 160 TEEIARIRGVPPGVDLISPPPH--HDIYSIEDLAQLIEELRELNPGKPVGVKLVA-------GRGVEDIAAGAAKAGADF 230 (368)
T ss_dssp -HHHHHHHTS-TT--EE--SS---TT-SSHHHHHHHHHHHHHH-TTSEEEEEEE--------STTHHHHHHHHHHTT-SE
T ss_pred hHHHHHHhCCCCCCccccCCCC--CCcCCHHHHHHHHHHHHhhCCCCcEEEEECC-------CCcHHHHHHhhhhccCCE
Confidence 4456666666433333334332 22568999999998877655 6676554443 2456777776666665 7
Q ss_pred EEeecccccc
Q 037144 266 VHVDAAYAGS 275 (502)
Q Consensus 266 lhVDaA~g~~ 275 (502)
+++||+.||.
T Consensus 231 ItIDG~~GGT 240 (368)
T PF01645_consen 231 ITIDGAEGGT 240 (368)
T ss_dssp EEEE-TT---
T ss_pred EEEeCCCCCC
Confidence 8999988774
No 490
>PRK05650 short chain dehydrogenase; Provisional
Probab=28.83 E-value=4e+02 Score=25.06 Aligned_cols=46 Identities=4% Similarity=-0.212 Sum_probs=27.9
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP 251 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp 251 (502)
++..+.+|- .|.+.+++.++........+-.|+.++|....+.+++
T Consensus 50 ~~~~~~~D~-----~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~ 95 (270)
T PRK05650 50 DGFYQRCDV-----RDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEE 95 (270)
T ss_pred ceEEEEccC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCccc
Confidence 677788763 3677777777654333223446777777666555533
No 491
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=28.72 E-value=4.8e+02 Score=24.24 Aligned_cols=42 Identities=14% Similarity=0.041 Sum_probs=25.5
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
++..+.+| -.|.+++++++++..+.-..+-+++.++|....+
T Consensus 56 ~~~~~~~D-----l~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~ 97 (251)
T PRK12481 56 KFHFITAD-----LIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQ 97 (251)
T ss_pred eEEEEEeC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 67778876 3477888888876543322333566666654433
No 492
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=28.71 E-value=32 Score=33.28 Aligned_cols=32 Identities=25% Similarity=0.280 Sum_probs=28.1
Q ss_pred CCccccccCChhHHHHHHHHhCCEEEeecccc
Q 037144 242 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 273 (502)
Q Consensus 242 gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g 273 (502)
..+..|..++++++++.|+++|+.|++|.+..
T Consensus 44 vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 44 VDPRFGTMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp ESTTTBHHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred cccccchhhhhhhhhhccccccceEEEeeecc
Confidence 45577889999999999999999999998764
No 493
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=28.44 E-value=1.3e+02 Score=29.70 Aligned_cols=19 Identities=37% Similarity=0.564 Sum_probs=18.1
Q ss_pred cCChhHHHHHHHHhCCEEE
Q 037144 249 VDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 249 idpl~eI~~i~~~~g~~lh 267 (502)
.|||+.+.+.||++|+-+|
T Consensus 69 ~DpL~~~I~eaHkrGlevH 87 (311)
T PF02638_consen 69 FDPLEFMIEEAHKRGLEVH 87 (311)
T ss_pred ccHHHHHHHHHHHcCCEEE
Confidence 7999999999999999888
No 494
>PLN02331 phosphoribosylglycinamide formyltransferase
Probab=28.43 E-value=4e+02 Score=24.48 Aligned_cols=71 Identities=20% Similarity=0.294 Sum_probs=38.8
Q ss_pred EEcCCchHHHHHHHHHHHHHHHHHhCccCC-CCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHH
Q 037144 144 VIQGTTCEALLCTLTAARDRVLKKIGRENI-SKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLS 222 (502)
Q Consensus 144 ~~t~ggt~a~~~al~~a~~~~~~~~~~~~~-~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~ 222 (502)
+++++| +|+.++.-+.+. + .. ...++++|+.......+.|+..|+ .+..++......-...-+++.+
T Consensus 5 l~Sg~G--sn~~al~~~~~~-----~--~l~~~i~~visn~~~~~~~~~A~~~gI---p~~~~~~~~~~~~~~~~~~~~~ 72 (207)
T PLN02331 5 FVSGGG--SNFRAIHDACLD-----G--RVNGDVVVVVTNKPGCGGAEYARENGI---PVLVYPKTKGEPDGLSPDELVD 72 (207)
T ss_pred EEeCCC--hhHHHHHHHHHc-----C--CCCeEEEEEEEeCCCChHHHHHHHhCC---CEEEeccccCCCcccchHHHHH
Confidence 344444 488777765442 1 11 234556666556666777788899 8877665321111233445555
Q ss_pred HHHH
Q 037144 223 QINL 226 (502)
Q Consensus 223 ~i~~ 226 (502)
.+++
T Consensus 73 ~l~~ 76 (207)
T PLN02331 73 ALRG 76 (207)
T ss_pred HHHh
Confidence 5554
No 495
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=28.34 E-value=50 Score=31.42 Aligned_cols=28 Identities=18% Similarity=0.192 Sum_probs=20.0
Q ss_pred ccccCChhHHHHHHHHhCCEEEeecccc
Q 037144 246 ITAVDPLKPLCDVAKQFGIWVHVDAAYA 273 (502)
Q Consensus 246 ~G~idpl~eI~~i~~~~g~~lhVDaA~g 273 (502)
.|.+.+.+++.++++++++-++||++|.
T Consensus 48 ~G~l~~~~~l~~~l~~~~i~~VIDATHP 75 (248)
T PRK08057 48 VGGFGGAEGLAAYLREEGIDLVIDATHP 75 (248)
T ss_pred ECCCCCHHHHHHHHHHCCCCEEEECCCc
Confidence 4555566777777777788888887773
No 496
>PRK07109 short chain dehydrogenase; Provisional
Probab=28.34 E-value=5e+02 Score=25.64 Aligned_cols=44 Identities=14% Similarity=-0.068 Sum_probs=27.0
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+++|- -|.+.++++++...+.-..+-+++-++|....+.+
T Consensus 58 ~~~~v~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~ 101 (334)
T PRK07109 58 EALAVVADV-----ADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPF 101 (334)
T ss_pred cEEEEEecC-----CCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCch
Confidence 788888873 47888888877654332233456666665544443
No 497
>KOG0622 consensus Ornithine decarboxylase [Amino acid transport and metabolism]
Probab=27.88 E-value=4.1e+02 Score=27.26 Aligned_cols=82 Identities=22% Similarity=0.262 Sum_probs=48.6
Q ss_pred CCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc------
Q 037144 174 SKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT------ 247 (502)
Q Consensus 174 ~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G------ 247 (502)
|.-.||++..--.|..+.|..-|+ ++-+++ ..++|++..+..... ..++-+++--++.+|
T Consensus 123 P~riIyanpcK~~s~IkyAa~~gV---~~~tfD---------ne~el~kv~~~hP~a--~llLrIatdds~a~~~l~~KF 188 (448)
T KOG0622|consen 123 PERIIYANPCKQVSQIKYAAKHGV---SVMTFD---------NEEELEKVAKSHPNA--NLLLRIATDDSTATCRLNLKF 188 (448)
T ss_pred hHHeEecCCCccHHHHHHHHHcCC---eEEeec---------CHHHHHHHHHhCCCc--eEEEEEccCCCcccccccCcc
Confidence 344667776667788888888898 666643 234555544433221 122333333344444
Q ss_pred --ccCChhHHHHHHHHhC-----CEEEee
Q 037144 248 --AVDPLKPLCDVAKQFG-----IWVHVD 269 (502)
Q Consensus 248 --~idpl~eI~~i~~~~g-----~~lhVD 269 (502)
..+.++.|.+.+++++ +.+||=
T Consensus 189 G~~~~~~~~lLd~ak~l~lnvvGvsfHvG 217 (448)
T KOG0622|consen 189 GCSLDNCRHLLDMAKELELNVVGVSFHVG 217 (448)
T ss_pred CCCHHHHHHHHHHHHHcCceEEEEEEEec
Confidence 2377888899999875 466774
No 498
>PRK05854 short chain dehydrogenase; Provisional
Probab=27.84 E-value=4.8e+02 Score=25.37 Aligned_cols=38 Identities=13% Similarity=-0.091 Sum_probs=24.6
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCC
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGT 243 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gt 243 (502)
++..+++|- -|++.+++++++..+....+-+++.++|.
T Consensus 66 ~v~~~~~Dl-----~d~~sv~~~~~~~~~~~~~iD~li~nAG~ 103 (313)
T PRK05854 66 KLSLRALDL-----SSLASVAALGEQLRAEGRPIHLLINNAGV 103 (313)
T ss_pred ceEEEEecC-----CCHHHHHHHHHHHHHhCCCccEEEECCcc
Confidence 677788763 37888888877654443334466666654
No 499
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=27.60 E-value=4.7e+02 Score=25.46 Aligned_cols=62 Identities=15% Similarity=0.073 Sum_probs=32.6
Q ss_pred eEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCC
Q 037144 176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGT 243 (502)
Q Consensus 176 ~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gt 243 (502)
.+++++. ......+.++.++....++..+++|- -|.+.+++++++..+.....-+++.++|.
T Consensus 30 ~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~~~~iD~lI~nAG~ 91 (314)
T TIGR01289 30 HVIMACR-DFLKAEQAAKSLGMPKDSYTIMHLDL-----GSLDSVRQFVQQFRESGRPLDALVCNAAV 91 (314)
T ss_pred EEEEEeC-CHHHHHHHHHHhcCCCCeEEEEEcCC-----CCHHHHHHHHHHHHHhCCCCCEEEECCCc
Confidence 3444443 23334444444433223677777763 37788888777654332233456666653
No 500
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=27.42 E-value=4.8e+02 Score=23.80 Aligned_cols=64 Identities=11% Similarity=-0.043 Sum_probs=33.9
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
.|+..........+.....+- ++..+++|- -|.+.+++++++..+.-..+-.|+-++|....+.
T Consensus 32 ~v~~~~~~~~~~~~~~~~~~~---~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~ 95 (245)
T PRK12936 32 IVGLHGTRVEKLEALAAELGE---RVKIFPANL-----SDRDEVKALGQKAEADLEGVDILVNNAGITKDGL 95 (245)
T ss_pred EEEEEcCCHHHHHHHHHHhCC---ceEEEEccC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCc
Confidence 444333333334444344444 677777763 3677888877665443223446666666554443
Done!