Query 037144
Match_columns 502
No_of_seqs 285 out of 2767
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 15:19:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037144.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037144hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e1o_A HDC, histidine decarbox 100.0 7.5E-75 2.6E-79 608.2 51.0 464 1-501 3-477 (481)
2 3k40_A Aromatic-L-amino-acid d 100.0 5.4E-75 1.8E-79 607.8 47.1 460 4-501 1-470 (475)
3 1js3_A DDC;, DOPA decarboxylas 100.0 1.1E-68 3.6E-73 563.0 49.1 463 4-501 1-473 (486)
4 3vp6_A Glutamate decarboxylase 100.0 1.2E-67 3.9E-72 557.0 55.8 475 4-501 19-504 (511)
5 2okj_A Glutamate decarboxylase 100.0 1.4E-64 4.7E-69 534.0 53.3 475 4-501 16-501 (504)
6 2jis_A Cysteine sulfinic acid 100.0 1.4E-63 4.7E-68 527.5 52.1 475 3-502 33-515 (515)
7 2qma_A Diaminobutyrate-pyruvat 100.0 9.1E-63 3.1E-67 519.2 51.3 459 3-502 28-496 (497)
8 2dgk_A GAD-beta, GADB, glutama 100.0 2.1E-48 7E-53 405.0 36.3 407 38-501 7-433 (452)
9 3hbx_A GAD 1, glutamate decarb 100.0 1.3E-45 4.4E-50 388.2 36.3 411 32-501 14-443 (502)
10 3mc6_A Sphingosine-1-phosphate 100.0 1.8E-40 6.1E-45 349.3 30.8 390 45-501 34-436 (497)
11 3mad_A Sphingosine-1-phosphate 100.0 7.6E-40 2.6E-44 345.9 32.3 387 47-501 69-468 (514)
12 3bc8_A O-phosphoseryl-tRNA(SEC 100.0 3.1E-37 1.1E-41 313.3 25.4 305 47-405 21-349 (450)
13 3f9t_A TDC, L-tyrosine decarbo 100.0 1.7E-35 5.7E-40 301.1 37.2 381 48-500 4-396 (397)
14 2z67_A O-phosphoseryl-tRNA(SEC 100.0 8.4E-37 2.9E-41 317.7 27.1 396 4-499 29-455 (456)
15 1wyu_B Glycine dehydrogenase s 100.0 9.6E-31 3.3E-35 273.3 31.1 393 38-500 31-439 (474)
16 3nnk_A Ureidoglycine-glyoxylat 100.0 4.3E-29 1.5E-33 255.5 28.4 359 75-501 10-389 (411)
17 3isl_A Purine catabolism prote 100.0 4.2E-29 1.4E-33 255.9 25.6 356 74-501 7-389 (416)
18 1wyu_A Glycine dehydrogenase ( 100.0 5.8E-28 2E-32 249.8 30.0 378 37-499 30-437 (438)
19 4hvk_A Probable cysteine desul 100.0 4.5E-28 1.5E-32 244.9 28.4 340 79-501 3-372 (382)
20 3kgw_A Alanine-glyoxylate amin 100.0 7.8E-28 2.7E-32 244.3 26.8 353 76-501 21-387 (393)
21 2dr1_A PH1308 protein, 386AA l 100.0 1.2E-27 4.1E-32 242.5 27.2 349 77-501 20-378 (386)
22 2huf_A Alanine glyoxylate amin 100.0 1.1E-27 3.7E-32 243.7 26.8 353 77-501 18-382 (393)
23 4eb5_A Probable cysteine desul 100.0 1.1E-27 3.7E-32 242.5 26.4 340 79-501 3-372 (382)
24 2z9v_A Aspartate aminotransfer 100.0 3.1E-27 1E-31 240.3 29.7 349 76-501 8-370 (392)
25 2yrr_A Aminotransferase, class 100.0 8.6E-28 3E-32 240.3 25.1 342 82-501 4-352 (353)
26 3hl2_A O-phosphoseryl-tRNA(SEC 100.0 1.7E-27 5.7E-32 238.2 26.5 393 40-501 31-460 (501)
27 1vjo_A Alanine--glyoxylate ami 100.0 2E-27 7E-32 241.7 27.2 345 79-499 36-392 (393)
28 3zrp_A Serine-pyruvate aminotr 100.0 1.3E-27 4.5E-32 241.9 23.2 318 111-501 30-362 (384)
29 3e9k_A Kynureninase; kynurenin 100.0 2.3E-27 7.8E-32 247.2 25.3 360 78-501 69-460 (465)
30 3lvm_A Cysteine desulfurase; s 100.0 1.4E-26 4.7E-31 237.9 30.8 341 77-501 23-398 (423)
31 3ffr_A Phosphoserine aminotran 100.0 5.9E-28 2E-32 242.5 19.2 342 79-499 5-361 (362)
32 1iug_A Putative aspartate amin 100.0 3.4E-27 1.2E-31 236.1 23.6 334 84-501 7-347 (352)
33 1t3i_A Probable cysteine desul 100.0 1.8E-26 6.1E-31 236.6 28.0 357 78-501 30-412 (420)
34 2ch1_A 3-hydroxykynurenine tra 100.0 9.6E-27 3.3E-31 236.9 25.5 353 76-501 16-382 (396)
35 3f0h_A Aminotransferase; RER07 99.9 3E-26 1E-30 231.6 26.9 339 83-501 24-373 (376)
36 1eg5_A Aminotransferase; PLP-d 99.9 1.6E-25 5.3E-30 226.6 32.2 341 78-501 3-375 (384)
37 1kmj_A Selenocysteine lyase; p 99.9 4.7E-26 1.6E-30 232.3 27.9 357 78-501 25-404 (406)
38 3vax_A Putative uncharacterize 99.9 1.1E-26 3.7E-31 236.9 21.4 352 76-501 20-399 (400)
39 1m32_A 2-aminoethylphosphonate 99.9 4.9E-26 1.7E-30 228.7 24.8 315 116-501 37-364 (366)
40 3dzz_A Putative pyridoxal 5'-p 99.9 5.4E-26 1.9E-30 230.8 24.6 335 90-502 42-389 (391)
41 2bkw_A Alanine-glyoxylate amin 99.9 5.3E-26 1.8E-30 230.3 24.2 353 77-501 4-383 (385)
42 3cai_A Possible aminotransfera 99.9 4.9E-26 1.7E-30 232.6 23.5 343 77-498 27-405 (406)
43 1elu_A L-cysteine/L-cystine C- 99.9 6E-26 2E-30 230.3 23.4 315 115-498 58-388 (390)
44 1svv_A Threonine aldolase; str 99.9 2.5E-25 8.4E-30 223.1 26.0 333 79-501 17-357 (359)
45 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1.9E-26 6.4E-31 232.6 17.3 302 115-502 52-370 (371)
46 1v72_A Aldolase; PLP-dependent 99.9 5.1E-26 1.7E-30 227.9 19.6 300 115-500 42-351 (356)
47 1j32_A Aspartate aminotransfer 99.9 1.2E-25 4E-30 228.5 21.8 330 91-501 46-386 (388)
48 2w8t_A SPT, serine palmitoyltr 99.9 2.1E-24 7.3E-29 222.3 30.9 298 115-501 108-414 (427)
49 1xi9_A Putative transaminase; 99.9 6.3E-25 2.2E-29 224.6 24.1 327 91-501 57-402 (406)
50 1qz9_A Kynureninase; kynurenin 99.9 1.3E-24 4.3E-29 222.8 26.2 311 116-501 71-401 (416)
51 2gb3_A Aspartate aminotransfer 99.9 2.7E-25 9.2E-30 227.6 20.6 325 91-501 59-401 (409)
52 4dq6_A Putative pyridoxal phos 99.9 1.2E-24 4E-29 220.9 24.9 326 90-499 47-390 (391)
53 1gd9_A Aspartate aminotransfer 99.9 5.2E-25 1.8E-29 223.7 22.1 330 90-501 41-385 (389)
54 3e77_A Phosphoserine aminotran 99.9 8.7E-26 3E-30 226.9 15.5 340 84-501 20-374 (377)
55 1o4s_A Aspartate aminotransfer 99.9 1E-24 3.5E-29 221.8 23.3 324 90-500 56-387 (389)
56 3tqx_A 2-amino-3-ketobutyrate 99.9 4.6E-24 1.6E-28 217.2 27.9 300 115-502 87-396 (399)
57 3l8a_A METC, putative aminotra 99.9 1.5E-24 5.1E-29 223.0 22.5 332 91-500 77-420 (421)
58 3nra_A Aspartate aminotransfer 99.9 5.3E-25 1.8E-29 224.8 18.1 316 107-501 73-404 (407)
59 1c7n_A Cystalysin; transferase 99.9 2.7E-24 9.2E-29 219.2 23.2 331 90-501 46-392 (399)
60 3ke3_A Putative serine-pyruvat 99.9 2.7E-24 9.2E-29 218.0 22.5 326 110-501 29-375 (379)
61 3m5u_A Phosphoserine aminotran 99.9 2.9E-25 9.8E-30 222.3 15.1 339 78-501 5-359 (361)
62 3dyd_A Tyrosine aminotransfera 99.9 9.2E-24 3.2E-28 217.5 25.5 340 89-501 72-423 (427)
63 3kax_A Aminotransferase, class 99.9 4.3E-24 1.5E-28 216.2 22.7 329 90-499 39-382 (383)
64 1d2f_A MALY protein; aminotran 99.9 1.1E-23 3.7E-28 214.1 24.9 331 90-501 43-388 (390)
65 1fc4_A 2-amino-3-ketobutyrate 99.9 3.5E-23 1.2E-27 211.0 28.7 300 116-501 90-396 (401)
66 3piu_A 1-aminocyclopropane-1-c 99.9 6.3E-24 2.2E-28 219.2 23.3 323 107-501 81-431 (435)
67 1u08_A Hypothetical aminotrans 99.9 3.6E-24 1.2E-28 217.4 20.9 329 90-497 45-385 (386)
68 3a9z_A Selenocysteine lyase; P 99.9 1.4E-23 4.7E-28 216.3 25.5 355 76-501 18-427 (432)
69 1iay_A ACC synthase 2, 1-amino 99.9 4.6E-23 1.6E-27 212.2 29.4 327 107-501 78-426 (428)
70 2zc0_A Alanine glyoxylate tran 99.9 1.8E-23 6.3E-28 213.6 25.5 334 89-501 50-403 (407)
71 3a2b_A Serine palmitoyltransfe 99.9 1.4E-23 4.7E-28 214.0 24.3 300 113-501 85-391 (398)
72 3g0t_A Putative aminotransfera 99.9 1.4E-23 4.7E-28 216.6 24.3 346 91-501 60-436 (437)
73 1b9h_A AHBA synthase, protein 99.9 6.8E-23 2.3E-27 208.1 28.6 332 93-501 19-387 (388)
74 3h14_A Aminotransferase, class 99.9 2.4E-23 8.3E-28 211.6 24.9 326 90-501 46-381 (391)
75 2o0r_A RV0858C (N-succinyldiam 99.9 7.8E-24 2.7E-28 216.8 20.5 331 91-500 41-394 (411)
76 3op7_A Aminotransferase class 99.9 1.5E-23 5.1E-28 211.9 21.6 307 105-501 56-370 (375)
77 1yiz_A Kynurenine aminotransfe 99.9 1.1E-23 3.8E-28 216.9 20.9 345 90-501 52-428 (429)
78 3cq5_A Histidinol-phosphate am 99.9 2.8E-22 9.5E-27 202.3 30.6 300 107-500 65-366 (369)
79 2fnu_A Aminotransferase; prote 99.9 1.4E-23 4.9E-28 211.7 21.1 332 91-501 13-371 (375)
80 1rv3_A Serine hydroxymethyltra 99.9 2.9E-24 9.9E-29 224.6 16.5 344 89-500 56-429 (483)
81 3ffh_A Histidinol-phosphate am 99.9 1.9E-22 6.4E-27 202.9 28.9 310 90-498 47-362 (363)
82 3kki_A CAI-1 autoinducer synth 99.9 1.5E-22 5E-27 207.2 28.3 294 116-501 104-403 (409)
83 3ly1_A Putative histidinol-pho 99.9 2E-22 6.8E-27 201.8 28.5 314 90-501 31-351 (354)
84 1b5p_A Protein (aspartate amin 99.9 2.9E-23 9.9E-28 210.7 22.7 326 91-500 47-383 (385)
85 3qm2_A Phosphoserine aminotran 99.9 1.3E-24 4.6E-29 219.4 12.6 307 111-501 67-384 (386)
86 3tcm_A Alanine aminotransferas 99.9 1.4E-22 4.8E-27 212.8 28.3 334 104-501 126-493 (500)
87 3aow_A Putative uncharacterize 99.9 2E-22 6.7E-27 208.8 29.0 335 89-501 92-444 (448)
88 3fdb_A Beta C-S lyase, putativ 99.9 5.7E-23 2E-27 207.5 24.3 323 91-501 39-375 (377)
89 2z61_A Probable aspartate amin 99.9 2.8E-23 9.6E-28 209.5 21.9 316 90-500 44-369 (370)
90 1bw0_A TAT, protein (tyrosine 99.9 6.2E-23 2.1E-27 210.3 24.8 342 90-501 52-412 (416)
91 1v2d_A Glutamine aminotransfer 99.9 1.9E-23 6.6E-28 211.6 20.0 320 90-501 40-370 (381)
92 3euc_A Histidinol-phosphate am 99.9 5.3E-23 1.8E-27 207.2 23.0 287 120-500 71-366 (367)
93 1vp4_A Aminotransferase, putat 99.9 5.5E-23 1.9E-27 211.5 23.4 333 90-501 60-417 (425)
94 2dkj_A Serine hydroxymethyltra 99.9 1.1E-23 3.7E-28 215.2 17.7 329 90-500 36-386 (407)
95 3ele_A Amino transferase; RER0 99.9 3.7E-23 1.3E-27 210.7 21.6 326 90-501 50-395 (398)
96 2vyc_A Biodegradative arginine 99.9 5.1E-23 1.8E-27 224.8 23.6 241 120-405 209-482 (755)
97 2x5d_A Probable aminotransfera 99.9 9E-23 3.1E-27 209.0 23.7 333 90-501 52-397 (412)
98 3uwc_A Nucleotide-sugar aminot 99.9 4.6E-23 1.6E-27 208.1 21.2 321 93-501 21-370 (374)
99 3get_A Histidinol-phosphate am 99.9 1.8E-22 6E-27 203.2 25.3 311 90-499 45-364 (365)
100 2c81_A Glutamine-2-deoxy-scyll 99.9 1.2E-22 4E-27 208.6 24.3 318 115-501 41-413 (418)
101 2fyf_A PSAT, phosphoserine ami 99.9 4.8E-23 1.6E-27 210.1 21.3 344 77-502 39-398 (398)
102 3frk_A QDTB; aminotransferase, 99.9 7.3E-24 2.5E-28 214.1 14.5 323 90-500 16-366 (373)
103 3dr4_A Putative perosamine syn 99.9 1.8E-23 6.3E-28 212.6 17.6 309 110-499 54-390 (391)
104 2x3l_A ORN/Lys/Arg decarboxyla 99.9 5E-24 1.7E-28 220.5 13.4 290 117-501 58-352 (446)
105 2zyj_A Alpha-aminodipate amino 99.9 1.7E-22 5.7E-27 205.9 23.5 321 90-501 49-392 (397)
106 1bs0_A Protein (8-amino-7-oxon 99.9 2.6E-22 8.7E-27 203.4 24.4 292 116-498 84-383 (384)
107 2o1b_A Aminotransferase, class 99.9 1.4E-22 4.9E-27 207.0 22.6 327 91-501 63-402 (404)
108 2bwn_A 5-aminolevulinate synth 99.9 5.2E-22 1.8E-26 202.5 26.6 299 118-501 93-399 (401)
109 2dou_A Probable N-succinyldiam 99.9 5.2E-22 1.8E-26 200.7 25.3 323 91-499 41-375 (376)
110 3b46_A Aminotransferase BNA3; 99.9 2.4E-23 8.3E-28 215.7 15.8 347 89-498 71-443 (447)
111 3ftb_A Histidinol-phosphate am 99.9 2.9E-21 9.8E-26 193.9 29.8 288 120-502 65-361 (361)
112 3fvs_A Kynurenine--oxoglutarat 99.9 2.1E-22 7.2E-27 206.7 21.8 346 89-502 42-422 (422)
113 2c0r_A PSAT, phosphoserine ami 99.9 2E-22 6.8E-27 202.7 20.8 305 111-501 44-360 (362)
114 2oga_A Transaminase; PLP-depen 99.9 2.3E-22 7.7E-27 205.2 21.4 324 91-501 44-395 (399)
115 2vi8_A Serine hydroxymethyltra 99.9 7E-22 2.4E-26 201.5 24.1 329 90-501 36-386 (405)
116 2a7v_A Serine hydroxymethyltra 99.9 6.5E-22 2.2E-26 205.4 23.7 335 90-500 67-439 (490)
117 2cb1_A O-acetyl homoserine sul 99.9 1.1E-21 3.9E-26 200.9 25.2 303 117-497 57-411 (412)
118 1c4k_A Protein (ornithine deca 99.9 5.3E-22 1.8E-26 215.0 23.7 249 119-404 176-447 (730)
119 3ihj_A Alanine aminotransferas 99.9 1.8E-21 6.1E-26 204.1 27.0 334 105-501 122-492 (498)
120 3lws_A Aromatic amino acid bet 99.9 1.9E-21 6.6E-26 195.0 25.3 330 76-498 11-355 (357)
121 3ezs_A Aminotransferase ASPB; 99.9 3E-21 1E-25 194.9 26.8 318 90-501 38-374 (376)
122 1mdo_A ARNB aminotransferase; 99.9 1.8E-21 6.1E-26 197.8 23.9 327 94-501 23-385 (393)
123 1lc5_A COBD, L-threonine-O-3-p 99.9 3.5E-21 1.2E-25 193.8 25.5 313 91-501 40-359 (364)
124 3n0l_A Serine hydroxymethyltra 99.9 2.1E-21 7.2E-26 198.8 23.7 309 110-500 65-387 (417)
125 1o69_A Aminotransferase; struc 99.9 2.4E-21 8.2E-26 197.3 23.9 329 112-500 32-385 (394)
126 1w23_A Phosphoserine aminotran 99.9 1.5E-22 5.2E-27 203.1 14.4 331 88-501 13-359 (360)
127 2rfv_A Methionine gamma-lyase; 99.9 1.1E-21 3.9E-26 199.9 21.0 287 115-498 63-396 (398)
128 3jtx_A Aminotransferase; NP_28 99.9 3.5E-21 1.2E-25 195.8 24.0 323 90-499 45-395 (396)
129 1fg7_A Histidinol phosphate am 99.9 8.3E-21 2.8E-25 190.6 25.9 284 121-498 63-354 (356)
130 3gbx_A Serine hydroxymethyltra 99.9 7.1E-22 2.4E-26 202.4 18.4 307 113-501 73-395 (420)
131 3hdo_A Histidinol-phosphate am 99.9 2.8E-21 9.5E-26 194.2 22.3 308 90-500 41-353 (360)
132 2x5f_A Aspartate_tyrosine_phen 99.9 3.6E-21 1.2E-25 198.2 23.0 314 106-501 82-428 (430)
133 1gc0_A Methionine gamma-lyase; 99.9 3.2E-21 1.1E-25 196.6 22.4 216 117-400 66-287 (398)
134 1jg8_A L-ALLO-threonine aldola 99.9 1.4E-21 4.7E-26 195.2 18.9 317 92-501 19-345 (347)
135 3rq1_A Aminotransferase class 99.9 7.3E-21 2.5E-25 195.1 24.5 332 88-501 56-414 (418)
136 2po3_A 4-dehydrase; external a 99.9 2.5E-20 8.5E-25 191.6 28.1 323 90-500 31-384 (424)
137 3qhx_A Cystathionine gamma-syn 99.9 7.6E-21 2.6E-25 193.4 23.6 216 118-402 68-289 (392)
138 3e2y_A Kynurenine-oxoglutarate 99.9 1.1E-21 3.7E-26 200.5 17.3 343 89-498 37-409 (410)
139 1e5e_A MGL, methionine gamma-l 99.9 1.4E-20 4.8E-25 192.3 25.4 213 120-400 66-285 (404)
140 3fsl_A Aromatic-amino-acid ami 99.9 4.7E-21 1.6E-25 194.9 20.9 325 91-498 47-396 (397)
141 3p1t_A Putative histidinol-pho 99.9 4.9E-20 1.7E-24 183.0 27.6 302 91-500 32-335 (337)
142 3b8x_A WBDK, pyridoxamine 5-ph 99.9 2.6E-20 8.8E-25 189.3 25.9 335 92-495 16-389 (390)
143 3qgu_A LL-diaminopimelate amin 99.9 2.6E-20 9E-25 192.8 26.1 307 105-501 104-439 (449)
144 1qgn_A Protein (cystathionine 99.9 1.6E-20 5.3E-25 193.4 23.9 230 118-416 116-368 (445)
145 3pj0_A LMO0305 protein; struct 99.9 3E-20 1E-24 186.4 25.5 294 119-498 51-358 (359)
146 3ecd_A Serine hydroxymethyltra 99.9 5E-21 1.7E-25 196.4 20.1 304 116-500 78-395 (425)
147 1ax4_A Tryptophanase; tryptoph 99.9 1.4E-20 4.8E-25 195.8 23.6 351 78-500 44-439 (467)
148 2ez2_A Beta-tyrosinase, tyrosi 99.9 1.3E-19 4.3E-24 188.1 30.6 317 107-501 70-430 (456)
149 3nyt_A Aminotransferase WBPE; 99.9 1.1E-21 3.7E-26 197.8 14.2 319 90-498 15-360 (367)
150 1cs1_A CGS, protein (cystathio 99.9 5.7E-20 2E-24 186.5 26.9 279 120-499 56-384 (386)
151 2r2n_A Kynurenine/alpha-aminoa 99.9 6.6E-20 2.3E-24 188.5 27.3 326 108-501 74-423 (425)
152 3b1d_A Betac-S lyase; HET: PLP 99.8 1.7E-23 5.9E-28 212.9 0.0 333 90-500 46-391 (392)
153 3t18_A Aminotransferase class 99.9 3.2E-20 1.1E-24 190.0 23.9 347 72-499 40-411 (413)
154 3ju7_A Putative PLP-dependent 99.9 2.3E-20 8E-25 188.7 22.3 309 111-500 35-373 (377)
155 2oqx_A Tryptophanase; lyase, p 99.9 4.2E-20 1.5E-24 192.2 24.3 375 54-500 18-440 (467)
156 3ri6_A O-acetylhomoserine sulf 99.9 1.3E-20 4.5E-25 193.4 19.9 244 110-415 80-355 (430)
157 4f4e_A Aromatic-amino-acid ami 99.9 1.1E-20 3.7E-25 194.0 19.1 326 91-499 70-419 (420)
158 1vef_A Acetylornithine/acetyl- 99.9 4.9E-20 1.7E-24 187.4 23.6 289 116-499 87-394 (395)
159 3if2_A Aminotransferase; YP_26 99.9 4E-20 1.4E-24 191.1 22.4 317 107-501 78-439 (444)
160 3ei9_A LL-diaminopimelate amin 99.8 1.9E-20 6.4E-25 192.9 18.9 308 106-500 92-426 (432)
161 2ctz_A O-acetyl-L-homoserine s 99.8 1.1E-19 3.8E-24 186.6 24.6 253 119-416 61-346 (421)
162 1pff_A Methionine gamma-lyase; 99.8 2.6E-20 9E-25 184.7 19.3 157 120-319 2-165 (331)
163 3h7f_A Serine hydroxymethyltra 99.8 3.1E-20 1.1E-24 192.3 20.0 307 112-500 87-412 (447)
164 3ndn_A O-succinylhomoserine su 99.8 6E-20 2.1E-24 187.9 21.0 218 117-403 82-305 (414)
165 7aat_A Aspartate aminotransfer 99.8 6.5E-20 2.2E-24 186.9 20.3 361 56-499 15-400 (401)
166 3acz_A Methionine gamma-lyase; 99.8 1.7E-19 6E-24 183.2 23.2 215 118-401 61-281 (389)
167 1ajs_A Aspartate aminotransfer 99.8 5.3E-20 1.8E-24 188.2 19.5 326 91-501 51-410 (412)
168 3ruy_A Ornithine aminotransfer 99.8 2.5E-19 8.7E-24 181.9 23.2 296 117-499 79-391 (392)
169 1yaa_A Aspartate aminotransfer 99.8 4.7E-20 1.6E-24 188.7 17.3 356 56-501 16-410 (412)
170 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 1.5E-19 5.2E-24 186.5 21.0 330 108-500 58-434 (437)
171 3fkd_A L-threonine-O-3-phospha 99.8 7.3E-19 2.5E-23 175.7 25.1 281 120-501 54-341 (350)
172 2fq6_A Cystathionine beta-lyas 99.8 1.2E-19 4.2E-24 185.5 19.7 233 110-416 80-337 (415)
173 2ord_A Acoat, acetylornithine 99.8 6.2E-19 2.1E-23 179.4 23.3 298 116-501 82-396 (397)
174 3g7q_A Valine-pyruvate aminotr 99.8 2.1E-19 7.3E-24 183.9 19.8 334 91-501 49-412 (417)
175 3meb_A Aspartate aminotransfer 99.8 1.3E-18 4.5E-23 180.1 25.7 360 54-501 34-443 (448)
176 1sff_A 4-aminobutyrate aminotr 99.8 6.6E-18 2.2E-22 173.4 29.5 316 118-501 86-423 (426)
177 2eh6_A Acoat, acetylornithine 99.8 7E-19 2.4E-23 177.4 21.8 287 119-498 73-374 (375)
178 1n8p_A Cystathionine gamma-lya 99.8 2.3E-19 7.8E-24 182.5 18.3 282 119-499 58-392 (393)
179 3ez1_A Aminotransferase MOCR f 99.8 7.8E-19 2.7E-23 180.2 22.1 310 107-501 64-414 (423)
180 3asa_A LL-diaminopimelate amin 99.8 2.4E-19 8.2E-24 182.8 18.1 304 107-501 70-392 (400)
181 3ppl_A Aspartate aminotransfer 99.8 9.4E-19 3.2E-23 179.9 22.5 315 107-501 73-419 (427)
182 2ay1_A Aroat, aromatic amino a 99.8 5.8E-19 2E-23 179.3 20.4 322 91-499 47-393 (394)
183 1ibj_A CBL, cystathionine beta 99.8 9E-20 3.1E-24 189.1 14.6 159 117-319 134-298 (464)
184 3cog_A Cystathionine gamma-lya 99.8 2.6E-19 8.9E-24 182.7 17.4 215 111-399 66-287 (403)
185 2q7w_A Aspartate aminotransfer 99.8 3.3E-19 1.1E-23 181.2 16.6 320 91-498 47-395 (396)
186 3nx3_A Acoat, acetylornithine 99.8 9.8E-18 3.4E-22 170.4 27.6 301 115-502 77-395 (395)
187 3dxv_A Alpha-amino-epsilon-cap 99.8 1.2E-17 4.1E-22 172.3 28.6 316 114-501 84-424 (439)
188 3n75_A LDC, lysine decarboxyla 99.8 1.9E-18 6.4E-23 185.8 22.9 238 120-405 199-457 (715)
189 3f6t_A Aspartate aminotransfer 99.8 7.7E-19 2.6E-23 185.6 19.2 365 88-501 116-524 (533)
190 1uu1_A Histidinol-phosphate am 99.8 3.5E-18 1.2E-22 169.8 22.7 298 90-498 34-334 (335)
191 3d6k_A Putative aminotransfera 99.8 3.9E-18 1.3E-22 175.1 23.3 316 106-501 70-417 (422)
192 4adb_A Succinylornithine trans 99.8 4.8E-18 1.7E-22 173.1 23.5 297 117-501 82-399 (406)
193 2eo5_A 419AA long hypothetical 99.8 2.7E-17 9.3E-22 168.7 28.5 297 117-501 87-417 (419)
194 2aeu_A Hypothetical protein MJ 99.8 1.8E-18 6.1E-23 174.8 19.3 296 115-501 57-370 (374)
195 2pb2_A Acetylornithine/succiny 99.8 6E-18 2E-22 173.6 23.2 301 116-501 99-417 (420)
196 1s0a_A Adenosylmethionine-8-am 99.8 2.2E-17 7.4E-22 169.9 27.1 307 118-501 88-423 (429)
197 4eu1_A Mitochondrial aspartate 99.8 3.9E-18 1.3E-22 174.2 21.1 354 56-499 28-408 (409)
198 1z7d_A Ornithine aminotransfer 99.8 4.5E-17 1.5E-21 167.7 28.6 303 116-501 107-428 (433)
199 3nmy_A Xometc, cystathionine g 99.8 1.1E-17 3.6E-22 170.4 23.2 220 110-403 65-292 (400)
200 3i16_A Aluminum resistance pro 99.8 7.1E-18 2.4E-22 172.3 21.4 233 121-415 78-340 (427)
201 3i4j_A Aminotransferase, class 99.8 3.2E-17 1.1E-21 168.6 26.4 329 115-501 71-427 (430)
202 3jzl_A Putative cystathionine 99.8 7.8E-18 2.7E-22 171.4 20.5 233 120-415 63-323 (409)
203 3a8u_X Omega-amino acid--pyruv 99.8 1.9E-16 6.7E-21 163.7 30.3 347 91-501 69-446 (449)
204 2oat_A Ornithine aminotransfer 99.8 8.9E-17 3.1E-21 165.8 27.6 303 118-502 120-439 (439)
205 1zod_A DGD, 2,2-dialkylglycine 99.8 3.4E-17 1.2E-21 168.6 23.0 320 116-501 85-431 (433)
206 3n5m_A Adenosylmethionine-8-am 99.8 2.9E-16 9.9E-21 162.6 29.9 330 114-502 89-452 (452)
207 3hvy_A Cystathionine beta-lyas 99.8 3.9E-17 1.3E-21 166.8 20.8 234 120-415 78-340 (427)
208 3tfu_A Adenosylmethionine-8-am 99.7 1.4E-16 4.8E-21 165.1 24.7 313 116-501 118-452 (457)
209 3oks_A 4-aminobutyrate transam 99.7 4.6E-16 1.6E-20 161.0 28.5 318 115-501 103-450 (451)
210 4a6r_A Omega transaminase; tra 99.7 3.4E-16 1.2E-20 162.4 27.3 322 115-501 93-448 (459)
211 3hmu_A Aminotransferase, class 99.7 6.2E-16 2.1E-20 160.9 28.0 326 115-501 98-451 (472)
212 3i5t_A Aminotransferase; pyrid 99.7 1.7E-15 5.6E-20 157.9 31.3 327 115-501 96-453 (476)
213 3gju_A Putative aminotransfera 99.7 7.1E-16 2.4E-20 160.1 28.3 329 115-501 94-455 (460)
214 3k28_A Glutamate-1-semialdehyd 99.7 1.4E-16 4.8E-21 163.8 22.5 312 117-501 94-426 (429)
215 3dod_A Adenosylmethionine-8-am 99.7 1.9E-15 6.4E-20 156.3 30.6 324 115-501 86-442 (448)
216 3ht4_A Aluminum resistance pro 99.7 2.1E-17 7.2E-22 169.6 15.5 225 118-402 67-312 (431)
217 4ffc_A 4-aminobutyrate aminotr 99.7 1.1E-15 3.7E-20 158.3 28.4 318 115-501 106-448 (453)
218 3l44_A Glutamate-1-semialdehyd 99.7 2.2E-16 7.5E-21 162.5 21.9 305 117-501 96-429 (434)
219 2cjg_A L-lysine-epsilon aminot 99.7 3.5E-16 1.2E-20 161.9 23.3 314 117-501 102-447 (449)
220 3fq8_A Glutamate-1-semialdehyd 99.7 7.4E-16 2.5E-20 158.3 23.5 311 115-502 91-427 (427)
221 2cy8_A D-phgat, D-phenylglycin 99.7 2.3E-15 8E-20 155.8 27.4 327 92-501 77-434 (453)
222 4e77_A Glutamate-1-semialdehyd 99.7 2.9E-15 1E-19 153.9 27.2 308 116-502 93-429 (429)
223 3k7y_A Aspartate aminotransfer 99.7 1.4E-16 4.7E-21 162.3 16.9 325 89-501 48-404 (405)
224 1ohv_A 4-aminobutyrate aminotr 99.7 2.3E-15 8E-20 156.6 26.0 315 114-502 108-471 (472)
225 2epj_A Glutamate-1-semialdehyd 99.7 1.8E-15 6.1E-20 155.8 22.9 309 115-501 95-430 (434)
226 3bwn_A AT1G70560, L-tryptophan 99.7 2.5E-15 8.5E-20 152.6 22.3 291 106-500 57-385 (391)
227 2zy4_A L-aspartate beta-decarb 99.7 8.6E-16 2.9E-20 162.4 17.9 189 107-317 133-332 (546)
228 2e7u_A Glutamate-1-semialdehyd 99.6 2.6E-14 8.9E-19 146.6 21.7 306 115-498 91-423 (424)
229 2hox_A ALLIIN lyase 1; cystein 99.6 5.2E-15 1.8E-19 152.0 14.5 307 89-500 70-423 (427)
230 3ou5_A Serine hydroxymethyltra 99.6 2.3E-13 7.9E-18 135.9 24.9 353 81-499 58-438 (490)
231 4h51_A Aspartate aminotransfer 99.5 6.8E-14 2.3E-18 142.6 16.3 328 92-501 66-416 (420)
232 4ao9_A Beta-phenylalanine amin 99.5 6.4E-12 2.2E-16 128.8 23.9 307 117-501 128-445 (454)
233 2yky_A Beta-transaminase; tran 99.1 1.1E-14 3.9E-19 150.1 0.0 307 115-501 139-459 (465)
234 4atq_A 4-aminobutyrate transam 99.4 3.8E-10 1.3E-14 116.0 33.1 318 117-501 108-454 (456)
235 4e3q_A Pyruvate transaminase; 99.3 1.3E-09 4.5E-14 112.4 27.8 326 117-501 112-467 (473)
236 4a0g_A Adenosylmethionine-8-am 99.2 1E-09 3.5E-14 120.8 21.5 328 120-502 428-828 (831)
237 4g81_D Putative hexonate dehyd 80.9 12 0.00041 34.4 10.9 68 175-250 33-103 (255)
238 4fgs_A Probable dehydrogenase 78.6 10 0.00035 35.3 9.7 70 175-252 53-122 (273)
239 3grp_A 3-oxoacyl-(acyl carrier 65.0 36 0.0012 31.1 10.0 67 177-251 53-119 (266)
240 4dqx_A Probable oxidoreductase 62.2 41 0.0014 30.9 9.9 65 178-250 54-118 (277)
241 2pju_A Propionate catabolism o 61.7 67 0.0023 28.7 10.7 72 174-269 107-179 (225)
242 1tks_A 3,4-dihydroxy-2-butanon 61.2 13 0.00046 32.6 5.7 53 216-268 142-194 (204)
243 3rwb_A TPLDH, pyridoxal 4-dehy 60.4 36 0.0012 30.6 9.0 65 177-249 32-96 (247)
244 3gvc_A Oxidoreductase, probabl 60.2 40 0.0014 31.0 9.4 65 177-249 55-119 (277)
245 3h8q_A Thioredoxin reductase 3 58.4 38 0.0013 26.3 7.7 73 174-256 17-91 (114)
246 4e6p_A Probable sorbitol dehyd 58.1 53 0.0018 29.6 9.8 64 178-249 35-98 (259)
247 3m0z_A Putative aldolase; MCSG 57.5 34 0.0012 30.5 7.6 74 186-272 145-221 (249)
248 4eso_A Putative oxidoreductase 56.1 40 0.0014 30.5 8.5 64 177-249 35-98 (255)
249 3lyl_A 3-oxoacyl-(acyl-carrier 55.7 81 0.0028 28.0 10.6 47 195-249 52-98 (247)
250 4ibo_A Gluconate dehydrogenase 55.3 79 0.0027 28.8 10.6 67 175-249 50-119 (271)
251 3mio_A DHBP synthase, 3,4-dihy 54.1 26 0.0009 30.8 6.4 52 217-268 142-194 (206)
252 3l6e_A Oxidoreductase, short-c 53.1 44 0.0015 29.7 8.2 64 177-249 30-93 (235)
253 3tfo_A Putative 3-oxoacyl-(acy 52.7 62 0.0021 29.5 9.3 44 201-249 54-97 (264)
254 2q5c_A NTRC family transcripti 52.3 77 0.0026 27.5 9.3 67 175-265 96-162 (196)
255 3h7a_A Short chain dehydrogena 52.0 71 0.0024 28.7 9.5 43 201-249 57-99 (252)
256 3imf_A Short chain dehydrogena 51.2 90 0.0031 28.0 10.1 67 177-249 33-99 (257)
257 1hxh_A 3BETA/17BETA-hydroxyste 50.9 1.1E+02 0.0038 27.3 10.7 64 177-249 33-96 (253)
258 3m6y_A 4-hydroxy-2-oxoglutarat 50.4 20 0.00068 32.4 5.0 73 187-272 169-244 (275)
259 3op4_A 3-oxoacyl-[acyl-carrier 50.2 58 0.002 29.2 8.6 65 177-249 35-99 (248)
260 3m1a_A Putative dehydrogenase; 49.1 83 0.0028 28.6 9.7 65 177-249 31-95 (281)
261 4dyv_A Short-chain dehydrogena 48.7 75 0.0026 29.0 9.2 59 177-244 55-113 (272)
262 3rih_A Short chain dehydrogena 47.9 1.2E+02 0.004 28.1 10.5 68 177-250 68-136 (293)
263 3n74_A 3-ketoacyl-(acyl-carrie 47.8 80 0.0027 28.3 9.2 60 177-245 36-95 (261)
264 3sju_A Keto reductase; short-c 47.7 76 0.0026 29.0 9.1 44 201-249 74-117 (279)
265 4fn4_A Short chain dehydrogena 47.7 60 0.0021 29.6 8.2 42 194-243 53-94 (254)
266 1g57_A DHBP synthase, 3,4-dihy 46.8 36 0.0012 30.2 6.2 51 217-268 151-201 (217)
267 3o38_A Short chain dehydrogena 46.8 1E+02 0.0034 27.8 9.7 45 200-249 73-117 (266)
268 3oid_A Enoyl-[acyl-carrier-pro 46.3 1.1E+02 0.0036 27.6 9.8 44 201-249 55-98 (258)
269 3l21_A DHDPS, dihydrodipicolin 46.3 32 0.0011 32.4 6.2 58 211-268 29-89 (304)
270 3tjr_A Short chain dehydrogena 45.4 85 0.0029 29.1 9.1 44 201-249 81-124 (301)
271 3v8b_A Putative dehydrogenase, 44.6 1.3E+02 0.0043 27.6 10.2 62 177-244 55-116 (283)
272 2wkj_A N-acetylneuraminate lya 43.9 16 0.00053 34.6 3.6 57 212-268 26-85 (303)
273 3dz1_A Dihydrodipicolinate syn 43.1 30 0.001 32.8 5.5 58 211-268 22-81 (313)
274 2jah_A Clavulanic acid dehydro 42.3 1.3E+02 0.0044 26.8 9.6 45 201-250 57-101 (247)
275 1snn_A DHBP synthase, 3,4-dihy 42.2 46 0.0016 29.8 6.1 52 216-268 161-212 (227)
276 3ged_A Short-chain dehydrogena 41.8 88 0.003 28.3 8.3 46 201-251 48-93 (247)
277 1x1t_A D(-)-3-hydroxybutyrate 41.7 1.5E+02 0.005 26.5 10.0 43 201-248 56-98 (260)
278 3ftp_A 3-oxoacyl-[acyl-carrier 41.4 1.4E+02 0.0049 27.0 9.9 49 194-250 74-122 (270)
279 1f6k_A N-acetylneuraminate lya 41.3 36 0.0012 31.8 5.7 57 212-268 18-78 (293)
280 1zco_A 2-dehydro-3-deoxyphosph 41.1 91 0.0031 28.5 8.3 72 201-276 131-205 (262)
281 4fc7_A Peroxisomal 2,4-dienoyl 41.0 97 0.0033 28.2 8.7 47 195-249 75-121 (277)
282 3edm_A Short chain dehydrogena 40.5 1.8E+02 0.006 26.1 10.3 44 201-249 59-103 (259)
283 1xky_A Dihydrodipicolinate syn 40.4 12 0.00041 35.4 2.1 57 212-268 27-86 (301)
284 3tox_A Short chain dehydrogena 40.2 1.7E+02 0.0059 26.6 10.3 64 176-244 33-96 (280)
285 2a4k_A 3-oxoacyl-[acyl carrier 39.8 1.1E+02 0.0038 27.6 8.8 63 177-248 33-95 (263)
286 3nvt_A 3-deoxy-D-arabino-heptu 39.8 1.1E+02 0.0038 29.8 9.0 69 201-275 250-323 (385)
287 3ezx_A MMCP 1, monomethylamine 39.7 77 0.0026 28.0 7.4 68 188-269 112-183 (215)
288 3lf2_A Short chain oxidoreduct 39.2 1.3E+02 0.0045 27.0 9.3 45 201-250 60-104 (265)
289 3ghf_A Septum site-determining 39.1 1.2E+02 0.004 24.1 7.6 49 215-267 25-78 (120)
290 3fkr_A L-2-keto-3-deoxyarabona 38.8 24 0.00083 33.4 4.1 57 212-268 23-82 (309)
291 2rhc_B Actinorhodin polyketide 38.8 1.6E+02 0.0054 26.7 9.8 43 201-248 72-114 (277)
292 3pk0_A Short-chain dehydrogena 38.8 1.5E+02 0.0052 26.6 9.6 46 200-250 60-105 (262)
293 2ew8_A (S)-1-phenylethanol deh 38.6 1.6E+02 0.0055 26.1 9.6 64 177-248 34-97 (249)
294 1vl8_A Gluconate 5-dehydrogena 38.5 1.4E+02 0.0048 26.9 9.3 43 201-248 72-114 (267)
295 3ctg_A Glutaredoxin-2; reduced 37.8 87 0.003 25.0 6.8 72 174-255 37-114 (129)
296 3s5o_A 4-hydroxy-2-oxoglutarat 37.8 33 0.0011 32.4 4.8 57 212-268 29-88 (307)
297 3flu_A DHDPS, dihydrodipicolin 37.7 31 0.001 32.4 4.6 58 211-268 21-81 (297)
298 3cpr_A Dihydrodipicolinate syn 37.4 31 0.0011 32.5 4.6 58 211-268 30-90 (304)
299 3na8_A Putative dihydrodipicol 37.3 26 0.00088 33.3 4.0 58 211-268 38-98 (315)
300 3b4u_A Dihydrodipicolinate syn 37.2 32 0.0011 32.2 4.6 51 212-262 18-68 (294)
301 1geg_A Acetoin reductase; SDR 37.1 1.8E+02 0.0063 25.8 9.8 43 201-248 52-94 (256)
302 2r8w_A AGR_C_1641P; APC7498, d 36.9 35 0.0012 32.6 4.9 57 212-268 49-108 (332)
303 3ai3_A NADPH-sorbose reductase 36.7 1.7E+02 0.0058 26.1 9.5 44 201-249 58-101 (263)
304 1hdc_A 3-alpha, 20 beta-hydrox 36.5 1.1E+02 0.0037 27.4 8.1 62 177-247 32-93 (254)
305 3l77_A Short-chain alcohol deh 36.4 1E+02 0.0036 26.9 7.9 49 194-250 49-97 (235)
306 4dpp_A DHDPS 2, dihydrodipicol 36.3 47 0.0016 32.1 5.6 58 211-268 73-133 (360)
307 3v2g_A 3-oxoacyl-[acyl-carrier 36.2 1.8E+02 0.0063 26.2 9.7 44 201-249 82-125 (271)
308 3zv4_A CIS-2,3-dihydrobiphenyl 36.2 1.3E+02 0.0044 27.4 8.7 59 177-244 32-90 (281)
309 4dmm_A 3-oxoacyl-[acyl-carrier 36.1 1.2E+02 0.0042 27.4 8.5 44 201-249 79-122 (269)
310 2ojp_A DHDPS, dihydrodipicolin 36.0 31 0.001 32.3 4.2 57 212-268 16-75 (292)
311 3si9_A DHDPS, dihydrodipicolin 35.8 28 0.00096 33.0 4.0 58 211-268 36-96 (315)
312 2c07_A 3-oxoacyl-(acyl-carrier 35.6 1.7E+02 0.0059 26.5 9.5 44 201-249 94-137 (285)
313 1yb1_A 17-beta-hydroxysteroid 35.6 2.3E+02 0.0078 25.4 10.3 43 201-248 81-123 (272)
314 3v2h_A D-beta-hydroxybutyrate 35.6 2E+02 0.0069 26.1 10.0 44 201-249 77-120 (281)
315 3tpc_A Short chain alcohol deh 35.6 99 0.0034 27.7 7.7 53 187-247 43-95 (257)
316 3tak_A DHDPS, dihydrodipicolin 35.6 31 0.0011 32.2 4.2 57 212-268 16-75 (291)
317 3oec_A Carveol dehydrogenase ( 35.5 1.5E+02 0.0051 27.6 9.2 45 201-250 108-152 (317)
318 1ae1_A Tropinone reductase-I; 35.3 2.4E+02 0.0082 25.3 10.4 44 201-249 71-115 (273)
319 3gaf_A 7-alpha-hydroxysteroid 35.3 1.8E+02 0.0061 25.9 9.4 44 201-249 62-105 (256)
320 3pgx_A Carveol dehydrogenase; 35.2 1.5E+02 0.0053 26.8 9.1 44 201-249 78-121 (280)
321 4egf_A L-xylulose reductase; s 35.2 1.4E+02 0.0048 26.9 8.7 47 195-249 68-114 (266)
322 3r1i_A Short-chain type dehydr 35.2 99 0.0034 28.2 7.7 44 201-249 82-125 (276)
323 3qze_A DHDPS, dihydrodipicolin 35.2 32 0.0011 32.6 4.2 58 211-268 37-97 (314)
324 3nyw_A Putative oxidoreductase 35.2 1.8E+02 0.0061 25.9 9.3 44 201-249 60-103 (250)
325 4fs3_A Enoyl-[acyl-carrier-pro 35.1 2.4E+02 0.0081 25.2 10.3 63 176-244 34-97 (256)
326 3cxt_A Dehydrogenase with diff 35.1 1.8E+02 0.0062 26.6 9.6 43 201-248 84-126 (291)
327 1w6u_A 2,4-dienoyl-COA reducta 34.6 2E+02 0.0067 26.2 9.8 42 201-247 77-118 (302)
328 3kzv_A Uncharacterized oxidore 34.2 1.5E+02 0.005 26.5 8.6 61 176-244 29-89 (254)
329 3is3_A 17BETA-hydroxysteroid d 34.2 1.3E+02 0.0043 27.2 8.3 48 194-249 65-112 (270)
330 2uvd_A 3-oxoacyl-(acyl-carrier 34.0 2.1E+02 0.0072 25.2 9.6 43 201-248 55-97 (246)
331 3u5t_A 3-oxoacyl-[acyl-carrier 33.7 1.9E+02 0.0066 26.0 9.4 44 201-249 78-121 (267)
332 3kts_A Glycerol uptake operon 33.6 19 0.00064 31.5 2.1 48 216-274 18-67 (192)
333 4gqr_A Pancreatic alpha-amylas 33.5 16 0.00055 36.7 2.0 32 242-273 69-100 (496)
334 3rkr_A Short chain oxidoreduct 33.4 1.3E+02 0.0044 27.0 8.1 38 201-243 79-116 (262)
335 3tzq_B Short-chain type dehydr 33.4 1.5E+02 0.0051 26.8 8.6 59 177-244 38-96 (271)
336 3tsc_A Putative oxidoreductase 33.3 1.3E+02 0.0046 27.1 8.3 44 201-249 74-117 (277)
337 2nuw_A 2-keto-3-deoxygluconate 33.3 29 0.001 32.4 3.6 51 212-262 14-64 (288)
338 1iy8_A Levodione reductase; ox 33.3 1.8E+02 0.0061 26.1 9.1 40 201-245 65-104 (267)
339 1w3i_A EDA, 2-keto-3-deoxy glu 33.3 34 0.0012 32.0 4.1 51 212-262 14-64 (293)
340 3h5d_A DHDPS, dihydrodipicolin 32.7 30 0.001 32.8 3.6 58 211-268 21-81 (311)
341 3rag_A Uncharacterized protein 32.6 41 0.0014 30.5 4.3 37 233-271 10-46 (242)
342 3rjz_A N-type ATP pyrophosphat 32.6 2.7E+02 0.0093 24.9 9.9 98 142-267 7-120 (237)
343 3awd_A GOX2181, putative polyo 32.5 2.4E+02 0.0081 24.9 9.8 40 201-245 63-102 (260)
344 3ioy_A Short-chain dehydrogena 32.4 1.2E+02 0.004 28.4 7.8 44 201-249 60-103 (319)
345 1k4i_A 3,4-dihydroxy-2-butanon 32.3 66 0.0023 28.8 5.5 50 218-268 152-212 (233)
346 3ppi_A 3-hydroxyacyl-COA dehyd 32.3 2.8E+02 0.0095 24.9 11.9 61 178-247 57-118 (281)
347 1zem_A Xylitol dehydrogenase; 32.2 2E+02 0.0068 25.7 9.2 39 201-244 57-95 (262)
348 3qiv_A Short-chain dehydrogena 32.0 1.5E+02 0.0053 26.2 8.4 38 201-243 59-96 (253)
349 2o23_A HADH2 protein; HSD17B10 32.0 2.1E+02 0.0073 25.3 9.4 53 187-247 48-100 (265)
350 2v9d_A YAGE; dihydrodipicolini 31.9 37 0.0013 32.7 4.1 51 212-262 46-96 (343)
351 2hmc_A AGR_L_411P, dihydrodipi 31.8 46 0.0016 31.9 4.8 57 212-268 41-97 (344)
352 3pxx_A Carveol dehydrogenase; 31.8 2.6E+02 0.009 25.1 10.1 42 201-247 72-113 (287)
353 3gk3_A Acetoacetyl-COA reducta 31.8 1.9E+02 0.0064 26.0 9.0 45 201-250 76-120 (269)
354 3uve_A Carveol dehydrogenase ( 31.5 1.9E+02 0.0064 26.2 9.0 42 201-247 77-118 (286)
355 3m5v_A DHDPS, dihydrodipicolin 31.2 35 0.0012 32.0 3.8 57 212-268 22-82 (301)
356 1nff_A Putative oxidoreductase 31.1 2E+02 0.0067 25.7 9.0 44 201-249 54-97 (260)
357 3a5f_A Dihydrodipicolinate syn 31.1 44 0.0015 31.2 4.5 57 211-268 16-75 (291)
358 3gdg_A Probable NADP-dependent 31.0 2.4E+02 0.008 25.1 9.6 50 193-250 69-118 (267)
359 2b4q_A Rhamnolipids biosynthes 30.8 2.9E+02 0.01 24.8 10.2 44 201-249 78-121 (276)
360 3s55_A Putative short-chain de 30.8 1.9E+02 0.0065 26.1 8.9 45 201-250 72-116 (281)
361 3t7c_A Carveol dehydrogenase; 30.4 1.9E+02 0.0064 26.6 8.9 43 201-248 90-132 (299)
362 2pnf_A 3-oxoacyl-[acyl-carrier 30.2 2.7E+02 0.0093 24.2 10.2 46 195-248 55-100 (248)
363 3qlj_A Short chain dehydrogena 30.1 1.5E+02 0.0052 27.5 8.3 44 201-249 87-130 (322)
364 1mxh_A Pteridine reductase 2; 30.0 2.3E+02 0.0079 25.4 9.3 45 201-250 63-111 (276)
365 4imr_A 3-oxoacyl-(acyl-carrier 29.9 1.9E+02 0.0064 26.2 8.7 43 201-249 83-125 (275)
366 3kfu_G Glutamyl-tRNA(Gln) amid 29.9 1.3E+02 0.0046 22.4 6.2 54 4-61 22-75 (92)
367 3a28_C L-2.3-butanediol dehydr 29.9 1.9E+02 0.0066 25.7 8.7 43 201-248 54-96 (258)
368 3u9l_A 3-oxoacyl-[acyl-carrier 29.5 2.5E+02 0.0085 26.2 9.6 48 194-249 56-103 (324)
369 3ucx_A Short chain dehydrogena 29.2 2.5E+02 0.0086 25.0 9.4 38 201-243 61-98 (264)
370 3ak4_A NADH-dependent quinucli 29.1 2E+02 0.0069 25.6 8.7 42 201-247 59-100 (263)
371 3e96_A Dihydrodipicolinate syn 29.0 34 0.0012 32.4 3.3 50 212-261 27-76 (316)
372 3osu_A 3-oxoacyl-[acyl-carrier 29.0 2.4E+02 0.0082 24.8 9.1 49 194-250 51-99 (246)
373 2wci_A Glutaredoxin-4; redox-a 28.9 1.9E+02 0.0066 23.2 7.5 69 174-255 35-110 (135)
374 3qfe_A Putative dihydrodipicol 28.6 34 0.0012 32.4 3.3 57 212-268 26-85 (318)
375 3ksu_A 3-oxoacyl-acyl carrier 28.4 1.5E+02 0.0051 26.6 7.7 44 201-249 64-107 (262)
376 2qv5_A AGR_C_5032P, uncharacte 28.1 2E+02 0.0068 26.3 8.2 89 178-270 60-162 (261)
377 3sc4_A Short chain dehydrogena 28.0 2E+02 0.0069 26.1 8.6 50 193-250 61-110 (285)
378 2nly_A BH1492 protein, diverge 28.0 2.4E+02 0.008 25.5 8.6 81 188-270 44-135 (245)
379 2ae2_A Protein (tropinone redu 27.9 2.7E+02 0.0094 24.6 9.4 42 201-247 59-101 (260)
380 2wsb_A Galactitol dehydrogenas 27.8 2.6E+02 0.0087 24.5 9.1 54 187-249 47-101 (254)
381 4iiu_A 3-oxoacyl-[acyl-carrier 27.8 2.4E+02 0.0082 25.2 9.0 44 201-249 77-120 (267)
382 1g94_A Alpha-amylase; beta-alp 27.4 23 0.0008 35.3 1.9 32 242-273 57-88 (448)
383 3ff4_A Uncharacterized protein 27.4 89 0.0031 24.8 5.1 43 216-267 67-109 (122)
384 2hq1_A Glucose/ribitol dehydro 27.2 3.1E+02 0.011 23.8 9.8 40 201-245 56-95 (247)
385 3l4n_A Monothiol glutaredoxin- 27.0 1.6E+02 0.0056 23.4 6.7 72 174-255 14-90 (127)
386 3d0c_A Dihydrodipicolinate syn 26.6 42 0.0014 31.8 3.4 57 212-268 27-86 (314)
387 3ezl_A Acetoacetyl-COA reducta 26.6 3.3E+02 0.011 23.9 11.6 51 192-250 58-108 (256)
388 1vs1_A 3-deoxy-7-phosphoheptul 26.5 3.2E+02 0.011 25.0 9.4 84 182-275 131-219 (276)
389 3eb2_A Putative dihydrodipicol 26.2 28 0.00095 32.8 2.1 58 211-268 18-78 (300)
390 1vr6_A Phospho-2-dehydro-3-deo 25.8 1.6E+02 0.0056 28.1 7.5 69 201-275 214-287 (350)
391 2r91_A 2-keto-3-deoxy-(6-phosp 25.8 41 0.0014 31.3 3.2 51 212-262 13-63 (286)
392 2yxg_A DHDPS, dihydrodipicolin 25.7 43 0.0015 31.2 3.3 57 212-268 15-74 (289)
393 3svt_A Short-chain type dehydr 25.7 2.3E+02 0.0077 25.6 8.4 38 201-243 64-101 (281)
394 1spx_A Short-chain reductase f 25.7 2.6E+02 0.0088 25.1 8.8 42 201-247 59-100 (278)
395 3kvo_A Hydroxysteroid dehydrog 25.2 2.6E+02 0.009 26.4 9.0 49 193-249 97-145 (346)
396 3dii_A Short-chain dehydrogena 25.2 2.4E+02 0.0082 24.8 8.4 45 201-250 48-92 (247)
397 1h5q_A NADP-dependent mannitol 25.0 3.5E+02 0.012 23.7 10.4 43 201-248 65-107 (265)
398 4gkb_A 3-oxoacyl-[acyl-carrier 25.0 3.8E+02 0.013 24.1 10.5 47 191-245 49-95 (258)
399 3bh4_A Alpha-amylase; calcium, 24.8 30 0.001 34.9 2.2 31 243-273 72-102 (483)
400 1ud2_A Amylase, alpha-amylase; 24.6 31 0.001 34.8 2.2 31 243-273 74-104 (480)
401 3asu_A Short-chain dehydrogena 24.6 2.1E+02 0.0071 25.4 7.8 50 187-244 36-85 (248)
402 1mxg_A Alpha amylase; hyperthe 24.4 31 0.0011 34.3 2.2 30 243-272 80-109 (435)
403 4iin_A 3-ketoacyl-acyl carrier 24.4 2.6E+02 0.0088 25.0 8.5 49 193-249 75-123 (271)
404 1zk4_A R-specific alcohol dehy 24.3 3.5E+02 0.012 23.5 10.3 44 201-249 55-98 (251)
405 2ehh_A DHDPS, dihydrodipicolin 24.2 45 0.0015 31.1 3.2 57 212-268 15-74 (294)
406 1lwj_A 4-alpha-glucanotransfer 24.2 30 0.001 34.4 2.0 26 246-271 66-91 (441)
407 1hvx_A Alpha-amylase; hydrolas 24.0 32 0.0011 35.1 2.2 30 243-272 75-104 (515)
408 1o5k_A DHDPS, dihydrodipicolin 23.9 48 0.0016 31.2 3.3 57 212-268 27-86 (306)
409 1uls_A Putative 3-oxoacyl-acyl 23.8 2.2E+02 0.0074 25.1 7.7 42 202-248 51-92 (245)
410 3ip4_C Aspartyl/glutamyl-tRNA( 23.7 1.3E+02 0.0044 22.9 5.1 57 4-61 20-79 (100)
411 3dhu_A Alpha-amylase; structur 23.7 30 0.001 34.4 2.0 30 243-272 77-106 (449)
412 1wpc_A Glucan 1,4-alpha-maltoh 23.7 33 0.0011 34.6 2.2 31 243-273 76-106 (485)
413 4dry_A 3-oxoacyl-[acyl-carrier 23.5 3.5E+02 0.012 24.4 9.3 39 201-244 84-122 (281)
414 2h7i_A Enoyl-[acyl-carrier-pro 23.4 3E+02 0.01 24.6 8.7 61 177-245 36-99 (269)
415 1t1v_A SH3BGRL3, SH3 domain-bi 23.3 2.2E+02 0.0074 20.7 7.2 69 174-255 2-80 (93)
416 2cq9_A GLRX2 protein, glutared 22.9 2.7E+02 0.0093 21.8 7.4 70 174-253 27-98 (130)
417 3e03_A Short chain dehydrogena 22.8 3.3E+02 0.011 24.4 9.0 48 194-249 59-106 (274)
418 2guy_A Alpha-amylase A; (beta- 22.8 33 0.0011 34.5 2.0 31 242-272 90-120 (478)
419 1gcy_A Glucan 1,4-alpha-maltot 22.6 33 0.0011 35.1 2.0 28 244-271 87-114 (527)
420 3i4f_A 3-oxoacyl-[acyl-carrier 22.6 2.4E+02 0.0081 25.1 7.8 37 201-242 58-94 (264)
421 2pcq_A Putative dihydrodipicol 22.5 29 0.001 32.3 1.4 55 212-268 13-67 (283)
422 1ht6_A AMY1, alpha-amylase iso 22.4 33 0.0011 33.7 1.9 30 244-273 63-92 (405)
423 2rfg_A Dihydrodipicolinate syn 22.3 45 0.0015 31.2 2.7 50 212-261 15-64 (297)
424 2cfc_A 2-(R)-hydroxypropyl-COM 22.2 2.8E+02 0.0095 24.2 8.2 42 201-247 53-94 (250)
425 1yxm_A Pecra, peroxisomal tran 22.1 3.7E+02 0.013 24.3 9.3 42 201-247 73-114 (303)
426 3ijr_A Oxidoreductase, short c 22.0 3.5E+02 0.012 24.5 9.0 39 201-244 98-136 (291)
427 2whl_A Beta-mannanase, baman5; 21.9 79 0.0027 29.2 4.4 39 190-231 38-77 (294)
428 2bd0_A Sepiapterin reductase; 21.8 2.8E+02 0.0096 24.1 8.1 43 201-248 59-101 (244)
429 3afn_B Carbonyl reductase; alp 21.5 3.8E+02 0.013 23.3 9.0 38 201-243 58-95 (258)
430 3p9x_A Phosphoribosylglycinami 21.5 3.4E+02 0.012 23.8 8.1 54 144-207 7-60 (211)
431 1bqc_A Protein (beta-mannanase 21.5 97 0.0033 28.6 4.9 19 188-209 37-55 (302)
432 2fiq_A Putative tagatose 6-pho 21.4 1.2E+02 0.0042 29.8 5.7 29 214-243 21-49 (420)
433 3rd5_A Mypaa.01249.C; ssgcid, 21.3 3.8E+02 0.013 24.2 9.1 55 177-244 43-97 (291)
434 1fov_A Glutaredoxin 3, GRX3; a 21.2 2.1E+02 0.0071 19.7 7.1 32 175-209 2-35 (82)
435 4e3z_A Putative oxidoreductase 21.2 3.5E+02 0.012 24.1 8.7 40 201-245 77-116 (272)
436 4ggo_A Trans-2-enoyl-COA reduc 21.2 5.8E+02 0.02 24.8 11.7 48 187-242 102-149 (401)
437 1x7f_A Outer surface protein; 21.1 98 0.0033 30.1 4.8 60 215-274 38-98 (385)
438 4aie_A Glucan 1,6-alpha-glucos 21.0 37 0.0013 34.7 2.0 30 243-272 73-102 (549)
439 1xkq_A Short-chain reductase f 21.0 3.7E+02 0.013 24.0 8.9 42 201-247 59-100 (280)
440 3kbq_A Protein TA0487; structu 21.0 3.3E+02 0.011 22.9 7.7 69 187-269 27-95 (172)
441 1wza_A Alpha-amylase A; hydrol 21.0 38 0.0013 34.1 2.1 26 246-271 78-103 (488)
442 2q2v_A Beta-D-hydroxybutyrate 20.8 4.3E+02 0.015 23.2 9.8 42 201-247 52-93 (255)
443 3sx2_A Putative 3-ketoacyl-(ac 20.6 4.5E+02 0.015 23.4 9.5 45 194-246 71-115 (278)
444 2z1k_A (NEO)pullulanase; hydro 20.6 38 0.0013 34.0 2.0 30 216-248 95-124 (475)
445 1jae_A Alpha-amylase; glycosid 20.5 32 0.0011 34.6 1.3 30 243-272 68-97 (471)
446 2dh2_A 4F2 cell-surface antige 20.2 41 0.0014 33.3 2.0 30 243-272 75-104 (424)
447 2ht9_A Glutaredoxin-2; thiored 20.0 3.3E+02 0.011 22.0 7.4 70 174-253 49-120 (146)
No 1
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.5e-75 Score=608.16 Aligned_cols=464 Identities=40% Similarity=0.778 Sum_probs=421.1
Q ss_pred CCccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccc
Q 037144 1 MDQAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYF 80 (502)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~ 80 (502)
+.+||+++||+.+++++|++.+|+++++++||.|.++|++++..++..+|++|.+.+++++++.+.++++.++|+||+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 82 (481)
T 4e1o_A 3 LGSMEPEEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDIERIIMPGVVHWQSPHMH 82 (481)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHHHHSGGGSCSSCCCCTTTTGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTSTTBC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCee
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCc---CCCCcEEEcCCchHHHHHHH
Q 037144 81 AYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLF---SGNGGGVIQGTTCEALLCTL 157 (502)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~---~~~~~g~~t~ggt~a~~~al 157 (502)
+|+++++++|+++++++.+.+|++...|..+|+++++|+++++|+++++|++..+.. .+.++|+||+|||+||++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al 162 (481)
T 4e1o_A 83 AYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIAL 162 (481)
T ss_dssp SSSCCCCCHHHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999875421 12347899999999999999
Q ss_pred HHHHHHHHHHhCcc-------C-CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh
Q 037144 158 TAARDRVLKKIGRE-------N-ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE 229 (502)
Q Consensus 158 ~~a~~~~~~~~~~~-------~-~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~ 229 (502)
.++|++...+.+.. + .++++|++|+.+|+|+.+++++.|. +++.||+++ +|+||+++|+++|+++++
T Consensus 163 ~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~---~~~~v~~~~--~~~~d~~~Le~~i~~~~~ 237 (481)
T 4e1o_A 163 LAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLV---KMKFLPVDD--NFSLRGEALQKAIEEDKQ 237 (481)
T ss_dssp HHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTC---EEEEECCCT--TSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCC---ceEEEEcCC--CCcCCHHHHHHHHHHHHh
Confidence 99998866532111 1 1678999999999999999999998 999999974 579999999999999888
Q ss_pred cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc
Q 037144 230 AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC 309 (502)
Q Consensus 230 ~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~ 309 (502)
+|..|++|++++|+|++|.+|||++|+++|++||+|+|||+||+++.+.+++++..+.+++.+||+++++|||+++|++|
T Consensus 238 ~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~ 317 (481)
T 4e1o_A 238 RGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDC 317 (481)
T ss_dssp TTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSC
T ss_pred CCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCce
Confidence 88889999999999999999999999999999999999999999998888888888888889999999999999999999
Q ss_pred eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 037144 310 CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLF 389 (502)
Q Consensus 310 g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l 389 (502)
|+++++++..+...+...+.|+..... +..+++.+++++++|++.++++|++++.+|.+|+++++++..++++++
T Consensus 318 g~l~~~~~~~l~~~~~~~~~yl~~~~~-----~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l 392 (481)
T 4e1o_A 318 TGFWVKDKYKLQQTFSVNPIYLRHANS-----GVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYF 392 (481)
T ss_dssp EEEEESBHHHHHTTTCCCCGGGCCTTT-----TTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCHHHHHHHhcCCchhccCccc-----CCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999998777777778889876431 234677889999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC
Q 037144 390 ERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG 469 (502)
Q Consensus 390 ~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~ 469 (502)
++.|+++|+|+++.++.+++++|++.+. +..+.++.++|.++|.++++++.+.
T Consensus 393 ~~~L~~~~g~~~~~~~~~~~v~f~~~~~---------------------------~~~~~~l~~~L~~~g~~~~~~~~~~ 445 (481)
T 4e1o_A 393 ESLVRNDPSFEIPAKRHLGLVVFRLKGP---------------------------NSLTENVLKEIAKAGRLFLIPATIQ 445 (481)
T ss_dssp HHHHHTCTTEECCSCCCSSEEEEEESSC---------------------------HHHHHHHHHHHHHHCSSBCEEEEET
T ss_pred HHHHhcCCCeEEecCCceeEEEEEeCCc---------------------------hHHHHHHHHHHHhCCeEEEEeeEEC
Confidence 9999999999998888899999998653 3456788999999998888898899
Q ss_pred CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 470 GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 470 g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
|..++|+++++++++++||+++++.|++++++
T Consensus 446 g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~ 477 (481)
T 4e1o_A 446 DKLIIRFTVTSQFTTRDDILRDWNLIRDAATL 477 (481)
T ss_dssp TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998764
No 2
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=5.4e-75 Score=607.84 Aligned_cols=460 Identities=43% Similarity=0.811 Sum_probs=399.6
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccC
Q 037144 4 AYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYF 83 (502)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~ 83 (502)
||+++||+.+++++|++.+|+++++++||.|.++|++|++.++..+|++|.+.+++++++.+.+.++.++|+||+|++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (475)
T 3k40_A 1 MEAPEFKDFAKTMVDFIAEYLENIRERRVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYF 80 (475)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCSSCTTCSGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTCTTBCCSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCCCCCcCceeeC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCc--CCCCcEEEcCCchHHHHHHHHHHH
Q 037144 84 PATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLF--SGNGGGVIQGTTCEALLCTLTAAR 161 (502)
Q Consensus 84 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~--~~~~~g~~t~ggt~a~~~al~~a~ 161 (502)
++++.+++++++++.+.+|++...|..+|.++++|+++++|+++++|+|..+.. .+.++|+||+|||+||++|+.++|
T Consensus 81 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar 160 (475)
T 3k40_A 81 PTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAK 160 (475)
T ss_dssp CCCCCHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999875422 123479999999999999999999
Q ss_pred HHHHHHhCccC--------CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 037144 162 DRVLKKIGREN--------ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELI 233 (502)
Q Consensus 162 ~~~~~~~~~~~--------~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~ 233 (502)
++...+.+..+ .++++|++|..+|+|+.+++++.|+ +++.||+++ ++ ||+++|+++|+++++++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~---~~~~v~~d~--~~-~d~~~L~~~i~~~~~~~~~ 234 (475)
T 3k40_A 161 AKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGV---KLRSVQSEN--HR-MRGAALEKAIEQDVAEGLI 234 (475)
T ss_dssp HHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTC---EEEEECCBT--TB-CCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCC---ceEEEECCC--CC-cCHHHHHHHHHHHHHCCCc
Confidence 88654321111 1467999999999999999999999 999999974 57 9999999999998888888
Q ss_pred cEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEE
Q 037144 234 PLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLW 313 (502)
Q Consensus 234 p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~ 313 (502)
|++|++++|+|++|.+|||++|+++|++||+|+|||+||+++.+.++.++..+.+++++||+++++|||+++|++||+++
T Consensus 235 ~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~ 314 (475)
T 3k40_A 235 PFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMW 314 (475)
T ss_dssp EEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred cEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEE
Confidence 99999999999999999999999999999999999999999988888888888888899999999999999999999999
Q ss_pred eeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q 037144 314 VKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLV 393 (502)
Q Consensus 314 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l 393 (502)
++++..+...+...+.|+..... +..+++.+++++++|++.++++|++++.+|.+|+++++++..++++++++.|
T Consensus 315 ~~~~~~l~~~~~~~~~yl~~~~~-----~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L 389 (475)
T 3k40_A 315 LKDPSWVVNAFNVDPLYLKHDMQ-----GSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLC 389 (475)
T ss_dssp ESSGGGC--------------------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCHHHHHHHhcCCccccCCCcC-----CCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987766667777888865421 2346778899999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEE
Q 037144 394 TSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYV 473 (502)
Q Consensus 394 ~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~ 473 (502)
+++|+|+++.++.+++|+|++.+. +..+.++.++|.++|.++++++.+.|..+
T Consensus 390 ~~~~g~~l~~~~~~~iv~f~~~~~---------------------------~~~~~~l~~~L~~~g~~~~~~~~~~g~~~ 442 (475)
T 3k40_A 390 VADSRFELAAEINMGLVCFRLKGS---------------------------NERNEALLKRINGRGHIHLVPAKIKDVYF 442 (475)
T ss_dssp HHSTTEEESSCCBTTEEEEEESSC---------------------------HHHHHHHHHHHHHHTSCBCEEEEETTEEE
T ss_pred hcCCCEEEecCCceEEEEEEeCCc---------------------------hHHHHHHHHHHHhCCcEEEEeeEECCEEE
Confidence 999999999888899999998653 34567889999999998899999999999
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 474 LRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 474 lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+|+++++++++++||+++++.|++++++
T Consensus 443 lR~~~~~~~tt~~di~~~~~~i~~~~~~ 470 (475)
T 3k40_A 443 LRMAICSRFTQSEDMEYSWKEVSAAADE 470 (475)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998764
No 3
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=100.00 E-value=1.1e-68 Score=563.03 Aligned_cols=463 Identities=43% Similarity=0.828 Sum_probs=402.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccC
Q 037144 4 AYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYF 83 (502)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~ 83 (502)
||+++||+++++++|++.+|++++.++||.|.++|+++++.++..+|++|.+++++++++.+.+.++..+|+||+|++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 80 (486)
T 1js3_A 1 MNASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYF 80 (486)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCCCCTTCSGGGSCSSCCSSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCceEeC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCc--CCCCcEEEcCCchHHHHHHHHHHH
Q 037144 84 PATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLF--SGNGGGVIQGTTCEALLCTLTAAR 161 (502)
Q Consensus 84 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~--~~~~~g~~t~ggt~a~~~al~~a~ 161 (502)
++++.+|+.+++++...+|++...|..+|..+++|+++++|+++++|++..+.. .+.++|++|+|||+||++++.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~ 160 (486)
T 1js3_A 81 PTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAAR 160 (486)
T ss_dssp CCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999864311 012368999999999999999998
Q ss_pred HHHHHHhCcc-C-------CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 037144 162 DRVLKKIGRE-N-------ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELI 233 (502)
Q Consensus 162 ~~~~~~~~~~-~-------~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~ 233 (502)
+...++.+.. | .++.+|++|..+|+|+.++++.+|+ .++.||++. +|+||+++|+++|++++++|.+
T Consensus 161 ~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~---~v~~v~~d~--~~~~d~~~L~~~i~~~~~~g~~ 235 (486)
T 1js3_A 161 TKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGV---KLKAIPSDG--KFAMRASALQEALERDKAAGLI 235 (486)
T ss_dssp HHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTC---EEEEECCCT--TSCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCC---ceEEeecCC--CCCCCHHHHHHHHHHHHhCCCC
Confidence 7654321100 0 0245789999999999999999999 999999974 6799999999999999988999
Q ss_pred cEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEE
Q 037144 234 PLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLW 313 (502)
Q Consensus 234 p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~ 313 (502)
|++|++++|+|++|.+||+++|+++|++||+|+|||+|||++.+.++++++.+.+++++||+++++|||+++|++||+++
T Consensus 236 p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~ 315 (486)
T 1js3_A 236 PFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMW 315 (486)
T ss_dssp EEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEE
Confidence 99999999999999999999999999999999999999999988888888877788899999999999999999999999
Q ss_pred eeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q 037144 314 VKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLV 393 (502)
Q Consensus 314 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l 393 (502)
++++..+.+.+...+.|+...... .....++.+++++++||+.++++|++++.+|.+|+++++++..++++++.+.|
T Consensus 316 ~~~~~~l~~~~~~~~~yl~~~~~~---~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L 392 (486)
T 1js3_A 316 VKRRTDLTGAFKLDPVYLKHSHQG---SGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFV 392 (486)
T ss_dssp ESCHHHHHGGGC---------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCHHHHHHHhcCCchhhCCCccc---ccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 998876556666667787653211 11235666788999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEE
Q 037144 394 TSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYV 473 (502)
Q Consensus 394 ~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~ 473 (502)
+++|+++++.+|.+++++|++.+. +..+.++.++|.++|.++++++.+.+..+
T Consensus 393 ~~~~~~~~~~~~~~~~v~f~~~~~---------------------------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 445 (486)
T 1js3_A 393 LQDPRFEVCAEVTLGLVCFRLKGS---------------------------DGLNEALLERINSARKIHLVPCRLRGQFV 445 (486)
T ss_dssp HHCTTEEECSCCCSSEEEEEESSC---------------------------HHHHHHHHHHHHHHTSCBCEEEEETTEEE
T ss_pred hcCCCeEEeCCCceeEEEEEecCh---------------------------HHHHHHHHHHHHhcCCEEEEEEEECCEEE
Confidence 999999998778889999998643 33457888888889988888888888999
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 474 LRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 474 lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+|+++++++++++||+++++.|++++++
T Consensus 446 lRi~~~~~~~t~~di~~~~~~l~~~~~~ 473 (486)
T 1js3_A 446 LRFAICSRKVESGHVRLAWEHIRGLAAE 473 (486)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999988989999999999999987654
No 4
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=100.00 E-value=1.2e-67 Score=557.04 Aligned_cols=475 Identities=21% Similarity=0.354 Sum_probs=414.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCCchhHhhc---CCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCc
Q 037144 4 AYAQEFRRQGHMFVDFMAEYYKNIDKY--PVRSQVEPGYLKKR---LPESAPYSPESVETILQDVQEHIVPGITHWQSPN 78 (502)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~---~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~ 78 (502)
-+.++++..+++++|++.+|++++.++ +|.+.++|++|+.. ++..+|++|.+++++++++.+.+.++ .+|+||+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~p~ 97 (511)
T 3vp6_A 19 NGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYG-VRTGHPR 97 (511)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHHCBTTBCCCCCSSCCCHHHHHHHHHHHHHTS-CCTTSTT
T ss_pred CChHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHhhcc-CCCCCCC
Confidence 367899999999999999999998765 57788999999999 89999999999999999999888776 5579999
Q ss_pred ccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHH
Q 037144 79 YFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLT 158 (502)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~ 158 (502)
||||+++++.+++++++++.+.+|++...|..+|+.+++|+++++|+++++|++.+. .+++||+|||+||+.|+.
T Consensus 98 f~~~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~-----~~~~~t~ggt~a~~~al~ 172 (511)
T 3vp6_A 98 FFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKD-----GDGIFSPGGAISNMYSIM 172 (511)
T ss_dssp EESSSSCCCCHHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSS-----CEEEEESSHHHHHHHHHH
T ss_pred ceEeecCCCcHHHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCC-----CceEECCchHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998531 379999999999999999
Q ss_pred HHHHHHHH---HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccE
Q 037144 159 AARDRVLK---KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL 235 (502)
Q Consensus 159 ~a~~~~~~---~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~ 235 (502)
++++++++ +.|..+.++++|++|..+|+|+.++++++|+|..+++.||++. +|+||+++|+++|+++.++|.+|+
T Consensus 173 ~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~--~~~~d~~~Le~~i~~~~~~g~~~~ 250 (511)
T 3vp6_A 173 AARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPF 250 (511)
T ss_dssp HHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCC--CCccCHHHHHHHHHHHHhcCCCcE
Confidence 99986532 2233334678999999999999999999999888899999985 579999999999999888888899
Q ss_pred EEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEee
Q 037144 236 FLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVK 315 (502)
Q Consensus 236 ~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r 315 (502)
+|++++|+|++|.+|||++|+++|++||+|+|||+||+++.+.+++++..+.|++++||+++++||||++|.+||+++++
T Consensus 251 ~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~ 330 (511)
T 3vp6_A 251 YVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVK 330 (511)
T ss_dssp EEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEES
T ss_pred EEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEe
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred CchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144 316 DPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS 395 (502)
Q Consensus 316 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~ 395 (502)
++..+...+...+.|+...... ....+++.+++++++|++.++++|++++.+|.+|+++++++..++++++++.|++
T Consensus 331 ~~~~~~~~~~~~~~yl~~~~~~---~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~ 407 (511)
T 3vp6_A 331 EKGILQGCNQMHASYLFQQDKH---YDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKN 407 (511)
T ss_dssp STTHHHHHHCCCCTTTCCSSCS---SCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHhccCCccccCcccc---cccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9887777777888898764432 2345677889999999999999999999999999999999999999999999999
Q ss_pred CCCeEEec--CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECC-EE
Q 037144 396 DKRFEVAF--PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGG-IY 472 (502)
Q Consensus 396 ~~~~~l~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g-~~ 472 (502)
+|+|+++. +|.+++++|++.|...+.. ..........+..+.++.++|.++|.+++.++...+ ..
T Consensus 408 ~pg~~l~~~~~p~~~~v~f~~~p~~~~~~------------~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~ 475 (511)
T 3vp6_A 408 REEFEMVFNGEPEHTNVCFWYIPQSLRGV------------PDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKAN 475 (511)
T ss_dssp CTTEEESSSSCCSSSCEEEEECCGGGSSC------------CCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEE
T ss_pred CCCEEEEecCCCCeEEEEEEEeCcccccc------------ccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceE
Confidence 99999987 5888999999987542110 000011223456677899999999988777655554 46
Q ss_pred EEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 473 VLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 473 ~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
++|++++++.++++||++++++|+++++.
T Consensus 476 ~lRi~~~~~~~t~~di~~ll~~i~~~~~~ 504 (511)
T 3vp6_A 476 FFRMVISNPAATQSDIDFLIEEIERLGQD 504 (511)
T ss_dssp EEEECCCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 89999989999999999999999998764
No 5
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=100.00 E-value=1.4e-64 Score=533.96 Aligned_cols=475 Identities=21% Similarity=0.353 Sum_probs=402.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCCchhHhhc---CCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCc
Q 037144 4 AYAQEFRRQGHMFVDFMAEYYKNIDKY--PVRSQVEPGYLKKR---LPESAPYSPESVETILQDVQEHIVPGITHWQSPN 78 (502)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~---~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~ 78 (502)
|++++||++++++++++.+|++++.++ ||.|.++|++|+.. ++..+|++|.+.+++++++.+.+.++.. +.||+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~p~ 94 (504)
T 2okj_A 16 NGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGVR-TGHPR 94 (504)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHSCBTTBCCCCCSSCCCHHHHHHHHHHHHHTSCC-TTCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHHhhccCC-CCCCC
Confidence 899999999999999999999998774 49999999999999 9999999999999999999887766654 45999
Q ss_pred ccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHH
Q 037144 79 YFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLT 158 (502)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~ 158 (502)
|++|++++..+++++++++.+++|++...|..+|..+++|+++++|+++++|++... .+++||+|||+||++++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~-----~~~~~t~ggtea~~~al~ 169 (504)
T 2okj_A 95 FFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKD-----GDGIFSPGGAISNMYSIM 169 (504)
T ss_dssp EESSSSCCCCHHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSS-----CEEEEESSHHHHHHHHHH
T ss_pred EEEEccCCCCHHHHHHHHHHHhhccCCCchhhChHHHHHHHHHHHHHHHHhCCCCCC-----CCEEEeCCcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998311 269999999999999999
Q ss_pred HHHHHHHH---HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccE
Q 037144 159 AARDRVLK---KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL 235 (502)
Q Consensus 159 ~a~~~~~~---~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~ 235 (502)
+++++..+ +.|....++.+|++|..+|+|+.++++.+|+|.++++.||+++ +|+||+++|+++|+++.++|..|.
T Consensus 170 ~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~ 247 (504)
T 2okj_A 170 AARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPF 247 (504)
T ss_dssp HHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCCcccEEEEecCC--CCCCCHHHHHHHHHHHHHCCCCce
Confidence 99875321 1111111255899999999999999999999776899999974 579999999999998887788899
Q ss_pred EEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEee
Q 037144 236 FLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVK 315 (502)
Q Consensus 236 ~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r 315 (502)
+|++++|+|++|.++|+++|+++|++||+|+|||+||+++.+.+++++..+.+++++||+++++|||+++|++||+++++
T Consensus 248 ~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~ 327 (504)
T 2okj_A 248 YVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVK 327 (504)
T ss_dssp EEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEES
T ss_pred EEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEE
Confidence 99999999999999999999999999999999999999999888888777888889999999999999999999999999
Q ss_pred CchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144 316 DPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS 395 (502)
Q Consensus 316 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~ 395 (502)
++..+...+...++|+...... .+..+++.+++++++||++++++|++++.+|.+|+++++++..+++++|.+.|++
T Consensus 328 ~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~ 404 (504)
T 2okj_A 328 EKGILQGCNQMCAGYLFQPDKQ---YDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKN 404 (504)
T ss_dssp STTHHHHHHCCCCSSSCCSCCS---SCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHhcCCCccccCCccc---ccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8766655566778888643321 1233567788999999999999999999999999999999999999999999999
Q ss_pred CCCeEEec--CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCE-E
Q 037144 396 DKRFEVAF--PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGI-Y 472 (502)
Q Consensus 396 ~~~~~l~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~-~ 472 (502)
+|+++++. +|..++++|++.+..... .. .........++.+.++.++|.++|.+++.++.+.+. .
T Consensus 405 ~~~~~~~~~~~p~~~~v~f~~~~~~~~~----------~~--~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~ 472 (504)
T 2okj_A 405 REEFEMVFNGEPEHTNVCFWYIPQSLRG----------VP--DSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKAN 472 (504)
T ss_dssp CTTEEESSSSCCSSSCEEEEECCGGGSS----------CC--CCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEE
T ss_pred CCCEEEEecCCCCeEEEEEEEeCccccc----------cc--cchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceE
Confidence 99999987 578889999986531100 00 000001122334678889999999888877777665 7
Q ss_pred EEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 473 VLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 473 ~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
++|++++|+.++++||+++++.|++++++
T Consensus 473 ~lRis~~~~~~t~edi~~~~~~l~~~~~~ 501 (504)
T 2okj_A 473 FFRMVISNPAATQSDIDFLIEEIERLGQD 501 (504)
T ss_dssp EEEECCCCTTCCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999988999999999999999998765
No 6
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=1.4e-63 Score=527.48 Aligned_cols=475 Identities=22% Similarity=0.342 Sum_probs=397.3
Q ss_pred ccCHHHHHHHHHHHHHHHHH-HHHhcCC--CCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcc
Q 037144 3 QAYAQEFRRQGHMFVDFMAE-YYKNIDK--YPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNY 79 (502)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~ 79 (502)
+|++++||++++++++++.+ |++++.. +||.|.++|++++..++..+|++|.+.+++++++.+.+.++.. +.||+|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~p~~ 111 (515)
T 2jis_A 33 AGDPVAVEALLRAVFGVVVDEAIQKGTSVSQKVCEWKEPEELKQLLDLELRSQGESQKQILERCRAVIRYSVK-TGHPRF 111 (515)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHTTTGGGCTTSCSCCCCCHHHHHHHHCCCCCSSCCCHHHHHHHHHHHHHHSCC-TTSTTE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCHHHHHhhcccCCCCCCCCHHHHHHHHHHHhcCCCC-CCCCCe
Confidence 58999999999999999999 9998765 4999999999999999999999999999999999987766654 459999
Q ss_pred cccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHH
Q 037144 80 FAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTA 159 (502)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ 159 (502)
++|++++..+++++++++...+|++...|..+|.++++|.++++|+++++|++.. +++||+|||+||++++.+
T Consensus 112 ~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~~~-------~~~~t~ggtea~~~al~~ 184 (515)
T 2jis_A 112 FNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWSSG-------DGIFCPGGSISNMYAVNL 184 (515)
T ss_dssp ESSSCCCCCHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCSSC-------EEEEESSHHHHHHHHHHH
T ss_pred EEEeeCCCCHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCCCC-------CeEEcCCcHHHHHHHHHH
Confidence 9999999999999999999989999889999999999999999999999999843 699999999999999999
Q ss_pred HHHHHH---HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEE
Q 037144 160 ARDRVL---KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLF 236 (502)
Q Consensus 160 a~~~~~---~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~ 236 (502)
+|+++. +..|..+.++.+|++|..+|+|+.++++.+|+|..+++.||+++ +++||+++|+++|+++.++|.+|.+
T Consensus 185 ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~ 262 (515)
T 2jis_A 185 ARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADE--RGKMVPEDLERQIGMAEAEGAVPFL 262 (515)
T ss_dssp HHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEecCC--CCcCCHHHHHHHHHHHHhCCCCcEE
Confidence 987542 11121112356899999999999999999999877899999975 5799999999999988777878999
Q ss_pred EEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeC
Q 037144 237 LCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKD 316 (502)
Q Consensus 237 Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~ 316 (502)
|++++|+|++|.++|+++|+++|++||+|+|||+||+++.+.++.++..+.+++++||+++++|||+++|++||++++++
T Consensus 263 Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~ 342 (515)
T 2jis_A 263 VSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQD 342 (515)
T ss_dssp EEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESC
T ss_pred EEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeC
Confidence 99999999999999999999999999999999999999999888888778888899999999999999999999999998
Q ss_pred c-hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144 317 P-SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS 395 (502)
Q Consensus 317 ~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~ 395 (502)
+ ..+...+...++|+...... ....+++..++++++||++++++|++++.+|.+|+++++++..++++++.+.|++
T Consensus 343 ~~~~~~~~~~~~~~yl~~~~~~---~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~ 419 (515)
T 2jis_A 343 TSNLLKRCHGSQASYLFQQDKF---YDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKK 419 (515)
T ss_dssp CSCHHHHHHCC---------CC---SCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHhcCCchhccCCccc---ccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8 55555566677888543221 1233566778889999999999999999999999999999999999999999999
Q ss_pred CCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECC-EEEE
Q 037144 396 DKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGG-IYVL 474 (502)
Q Consensus 396 ~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g-~~~l 474 (502)
+|+++++.++..++++|++.|...... .+ ...-...+++.+..+.+.+.++|.++++++.+.+ ..++
T Consensus 420 ~~g~~~~~~~~~~~v~f~~~p~~~~~~---------~~---~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~l 487 (515)
T 2jis_A 420 REGFELVMEPEFVNVCFWFVPPSLRGK---------QE---SPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFF 487 (515)
T ss_dssp STTEEESSCCSSSEEEEEECCGGGTTC---------TT---STTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEE
T ss_pred CCCEEEeCCCCeeEEEEEEeCcccccc---------cc---chhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEE
Confidence 999999987778899999865321000 00 0000122334456788889999988877766655 4799
Q ss_pred EEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144 475 RFAAGNSMTMESHVRAAWTVVQEHLEAF 502 (502)
Q Consensus 475 R~~~~~~~t~~~di~~~~~~l~~~~~~~ 502 (502)
|++++++.++++||+++++.|+++++++
T Consensus 488 Ris~~~~~~t~edid~~~~~l~~~~~~~ 515 (515)
T 2jis_A 488 RVVVANSALTCADMDFLLNELERLGQDL 515 (515)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHTTC
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 9999788899999999999999988753
No 7
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=9.1e-63 Score=519.21 Aligned_cols=459 Identities=22% Similarity=0.360 Sum_probs=388.4
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHhhcCCC-CCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccc
Q 037144 3 QAYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPE-SAPYSPESVETILQDVQEHIVPGITHWQSPNYFA 81 (502)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~ 81 (502)
+++.++||+++++++|.+.+|+++.+ +| .+.++|+++++.++. .+|++|.+++++++++.+.++++.++|+||+||+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~ 105 (497)
T 2qma_A 28 ELGSAEFASVMSHTTSAMKSVFEQVN-AP-YSGMDPKALEDAINAVDLDNKNAPLKSVIDDVAELVAKNAIFTQHPDCIA 105 (497)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHHCC-SS-SCCCCHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHTTTTSCCTTSTTBCS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhcc-CC-CCCCCHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeE
Confidence 57899999999999999999999984 44 788899999999987 4899999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHH
Q 037144 82 YFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR 161 (502)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~ 161 (502)
|+.+++.+++++++++...+|++...|..+|..+++|+++++|+++++|++... .++||+|||+||+.++.++|
T Consensus 106 ~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~------~~~~t~ggt~a~~~al~~ar 179 (497)
T 2qma_A 106 HLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKA------DGIFTSGGTQSNQMGLMLAR 179 (497)
T ss_dssp SSCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTC------EEEEESSHHHHHHHHHHHHH
T ss_pred eCCCCCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCCC------CeEEcCCchHHHHHHHHHHH
Confidence 999999999999999999999988889999999999999999999999997532 69999999999999999998
Q ss_pred HHHHHHh-C----ccCC----CCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCC
Q 037144 162 DRVLKKI-G----RENI----SKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAEL 232 (502)
Q Consensus 162 ~~~~~~~-~----~~~~----~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~ 232 (502)
+++..+. + ..|. ++.+|+++..+|+|+.++++.+|+|.++++.||+++ +++||+++|+++|+++.++|.
T Consensus 180 ~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~ 257 (497)
T 2qma_A 180 DWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANA--DGTMDITKLDEVIAQAKAEGL 257 (497)
T ss_dssp HHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSSBCGGGHHHHHHHHHHTTC
T ss_pred HHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCC--CCcCCHHHHHHHHHHHHHCCC
Confidence 7654210 0 0111 244899999999999999999999766799999974 579999999999998877777
Q ss_pred ccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEE
Q 037144 233 IPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCL 312 (502)
Q Consensus 233 ~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~ 312 (502)
+|++|+++.|+|++|.+||+++|+++|++||+|+|||+||+++...++ ++..+.+++++|++++++|||+++|++||++
T Consensus 258 ~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l 336 (497)
T 2qma_A 258 IPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQTISCGAL 336 (497)
T ss_dssp EEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCCCSSCEEE
T ss_pred cceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCCCcceEEE
Confidence 788999999999999999999999999999999999999999988777 6666778889999999999999999999999
Q ss_pred EeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 037144 313 WVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERL 392 (502)
Q Consensus 313 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~ 392 (502)
+++++..+. .+...+.|+..... ...++..++++++|++.++++|++++.+|.+|+++++++..+++++|.+.
T Consensus 337 ~~~~~~~~~-~~~~~~~yl~~~~~------~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~ 409 (497)
T 2qma_A 337 LVNDKSNFK-FLLHHADYLNREHD------ELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADM 409 (497)
T ss_dssp EESCGGGGG-GGCC--------------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCHHHHH-HhcCCchhcCCccc------cCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 999887543 45455667754221 12455667889999999999999999999999999999999999999999
Q ss_pred HhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEE
Q 037144 393 VTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIY 472 (502)
Q Consensus 393 l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~ 472 (502)
|+++|+++++.++..++++|++.+... ..++++.++.+.+.++|.++++++.+.+..
T Consensus 410 L~~~~~~~~~~~~~~~~v~f~~~~~~~-----------------------~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~ 466 (497)
T 2qma_A 410 IRTNDQFELLAEPSLSTVLFRATHETA-----------------------DLDELNKALRLEALTRGIAVLGETIVDGKT 466 (497)
T ss_dssp HHTCTTEEECSCCSSSEEEEEECCSSS-----------------------CHHHHHHHHHHHHHHHTSCBCEEEEETTEE
T ss_pred HhhCCCeEEEcCCCceEEEEEEcCCcc-----------------------CHHHHHHHHHHHHHhCCCEEEEeeEECCEE
Confidence 999999999878888999999865320 124566788888999999888888888889
Q ss_pred EEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144 473 VLRFAAGNSMTMESHVRAAWTVVQEHLEAF 502 (502)
Q Consensus 473 ~lR~~~~~~~t~~~di~~~~~~l~~~~~~~ 502 (502)
++|++++++.++++||+++++.|+++++++
T Consensus 467 ~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 467 ALKFTILNPCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp EEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 999999888899999999999999988753
No 8
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=100.00 E-value=2.1e-48 Score=405.00 Aligned_cols=407 Identities=15% Similarity=0.193 Sum_probs=315.2
Q ss_pred chhHhhcCCCCCCCCCCCHHHHHHHHHHhh-cCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHH
Q 037144 38 PGYLKKRLPESAPYSPESVETILQDVQEHI-VPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVE 116 (502)
Q Consensus 38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~ 116 (502)
...++..++..+|++|.+.+++++++.+.+ .++..++.||+|++. +. +..+.+++...++.+...|..+|...+
T Consensus 7 ~~~~~~~~~~~lp~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~~----~~-~~~v~e~~~~a~~~~~~~~~~~~~~~~ 81 (452)
T 2dgk_A 7 KSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQT----WD-DENVHKLMDLSINKNWIDKEEYPQSAA 81 (452)
T ss_dssp --------CCSCCCSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSCC----CC-CHHHHHHHHHTTTCBTTCTTTCHHHHH
T ss_pred hHHhhhccCCCCCCCCCCHHHHHHHHHHHhcCCCCCccCCCCeeCC----Cc-hHHHHHHHHHHhccCCCChhhChhHHH
Confidence 445667778889999999999999999988 688888899999872 11 245789999999888888999999999
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCC--CCeEEEeCCCCchhHHHHHHH
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENI--SKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~--~~~~v~~s~~~H~s~~~aa~~ 194 (502)
+|+++++|+++++|++.... +...+++|+|||+||++++.++++.+.++....|. .+++|+++. .|+++.+++++
T Consensus 82 l~~~~~~~la~l~g~~~~~~--~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~ 158 (452)
T 2dgk_A 82 IDLRCVNMVADLWHAPAPKN--GQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARY 158 (452)
T ss_dssp HHHHHHHHHHHHTTCCCCTT--SCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccc--cCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHH
Confidence 99999999999999976410 00248999999999999999988754322111121 135788899 99999999999
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh------CCEEEe
Q 037144 195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF------GIWVHV 268 (502)
Q Consensus 195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~------g~~lhV 268 (502)
+|+ +++.||+++ ++|.||+++|+++|+++ +.+|+++.|+|++|.++|+++|+++|++| |+|+||
T Consensus 159 ~G~---~v~~v~~~~-~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~v 228 (452)
T 2dgk_A 159 WDV---ELREIPMRP-GQLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHI 228 (452)
T ss_dssp TTC---EEEECCCBT-TBCSCCHHHHHHHCCTT------EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_pred cCc---eEEEEecCC-CCCeECHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEE
Confidence 999 999999975 35899999999999654 46899999999999999999999999996 999999
Q ss_pred eccccccccc--CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144 269 DAAYAGSACI--CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG 346 (502)
Q Consensus 269 DaA~g~~~~~--~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (502)
|+||+++..+ .+..+..+ .+.++|++++++|||+++|.++|+++++++..+.+.+...+.|+...
T Consensus 229 D~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~------------ 295 (452)
T 2dgk_A 229 DAASGGFLAPFVAPDIVWDF-RLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQ------------ 295 (452)
T ss_dssp ECTTGGGTHHHHCTTCCCST-TSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCC------------
T ss_pred EcccHHHHHHhhCccchhhc-CCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCC------------
Confidence 9999987652 33222222 25689999999999999999999999988754434444445565421
Q ss_pred CCcccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC----CCeeEEEEEeecCcchh
Q 037144 347 YKDWQITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP----RNFSLVCFRVTPSAVMD 421 (502)
Q Consensus 347 ~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~----~~~~~v~f~~~~~~~~~ 421 (502)
+..++++++|++ .++++|++++.+|.+++++++++..++++++.+.|+++++++++.+ +..++++|++.+...
T Consensus 296 ~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~-- 373 (452)
T 2dgk_A 296 IGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGED-- 373 (452)
T ss_dssp EEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCC--
T ss_pred CCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCccc--
Confidence 123456778887 6789999999999999999999999999999999999989999865 578899999865210
Q ss_pred hhhhcccCCCcccccccchhHhhHHH-HHHHHHHHHhcCcE---EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144 422 KLRTKYKNGTYDQYRQFSEEERTNEF-NRELLESINVSGKV---FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~g~~---~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~ 497 (502)
... ..++.++|.++|+. +..++...+..++|+++++++| ++|++++++.|++
T Consensus 374 -----------------------~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t-~e~id~li~~l~~ 429 (452)
T 2dgk_A 374 -----------------------PGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFE-MDFAELLLEDYKA 429 (452)
T ss_dssp -----------------------CSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCTTCC-HHHHHHHHHHHHH
T ss_pred -----------------------ccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecCCCC-HHHHHHHHHHHHH
Confidence 000 14677788888873 3333334467799999987754 7799999999988
Q ss_pred HHHh
Q 037144 498 HLEA 501 (502)
Q Consensus 498 ~~~~ 501 (502)
+.+.
T Consensus 430 ~~~~ 433 (452)
T 2dgk_A 430 SLKY 433 (452)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 9
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=100.00 E-value=1.3e-45 Score=388.21 Aligned_cols=411 Identities=17% Similarity=0.240 Sum_probs=326.4
Q ss_pred CCCCCCchhHhhcCCC-CCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccc-ccCCCCCCHHHHHHHHHHhhcCCCCcccc
Q 037144 32 VRSQVEPGYLKKRLPE-SAPYSPESVETILQDVQEHIVPGITHWQSPNYF-AYFPATSSVAGIVGEMLSSGFNVVGLDWI 109 (502)
Q Consensus 32 ~~~~~~~~~l~~~~~~-~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~l~~~~n~~~~~~~ 109 (502)
..|...+.++++.+|. .+|++|.+.+++++++.+.+..+ .||+++ +.+. +..++..+.+++...++.+...|.
T Consensus 14 ~~~~~~~~~~~~~lp~~~~p~~~~~~~~~~~~~~~~i~l~----gnp~~~l~s~~-t~~~~~~v~~~l~~~~~~~~~~~~ 88 (502)
T 3hbx_A 14 VHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLD----GNPRLNLASFV-TTWMEPECDKLIMSSINKNYVDMD 88 (502)
T ss_dssp CSCTTTSSGGGSCCCSSSCCSSCCCHHHHHHHHHHHGGGS----CCGGGBTTCCS-CCCCCHHHHHHHHHTTTCBTTCTT
T ss_pred ccccccchhhhhhccCCCCCCCCCCHHHHHHHHHHHhccC----CCCCceecccc-CCCCCHHHHHHHHHHhccCCCChh
Confidence 4456778999999998 89999999999999999876432 467743 3322 233345688888899998888889
Q ss_pred cChhhHHHHHHHHHHHHHhcCCC--CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC--CCCeEEEeCCCCc
Q 037144 110 SSPAAVELENIVMDWLGQMLDLP--KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN--ISKLVVYSSDQTH 185 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~--~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~--~~~~~v~~s~~~H 185 (502)
.+|.+.++|+++++|+++++|++ .+. ...|++|+|||+||++++.+++..+.++....| ..++.|+++..+|
T Consensus 89 ~~p~~~~le~~~~~~la~l~g~~~~~~~----~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h 164 (502)
T 3hbx_A 89 EYPVTTELQNRCVNMIAHLFNAPLEEAE----TAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQ 164 (502)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCCCSSC----CCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCC
T ss_pred cChhHHHHHHHHHHHHHHHhCCCccccc----CCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCch
Confidence 99999999999999999999998 221 125788999999999999988876544321111 2345899999999
Q ss_pred hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---
Q 037144 186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF--- 262 (502)
Q Consensus 186 ~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~--- 262 (502)
+++.++++++|+ .++.||+++ ++|.||+++|+++|+++ |.+|+++.++|++|.++|+++|+++|+++
T Consensus 165 ~s~~~~~~~~G~---~~~~v~~~~-~~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~ 234 (502)
T 3hbx_A 165 VCWEKFARYFEV---ELKEVKLSE-GYYVMDPQQAVDMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLVEKNKE 234 (502)
T ss_dssp HHHHHHHHHTTC---EEEEECCBT-TBCSCCHHHHHHHCCTT------EEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCc---eeEEEecCC-CcCcCCHHHHHHHHhhC------CEEEEEecCCCCCCcccCHHHHHHHHHHhhhc
Confidence 999999999999 999999975 34899999999999764 46899999999999999999999999999
Q ss_pred ---CCEEEeecccccccc--cCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCC
Q 037144 263 ---GIWVHVDAAYAGSAC--ICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATD 337 (502)
Q Consensus 263 ---g~~lhVDaA~g~~~~--~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~ 337 (502)
|+|+|||+||+++.. ..+..+..+. +.++|++++++|||+++|.++|+++++++..+...+...+.|+....
T Consensus 235 ~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~-~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~-- 311 (502)
T 3hbx_A 235 TGWDTPIHVDAASGGFIAPFLYPELEWDFR-LPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQ-- 311 (502)
T ss_dssp HCCCCCEEEECTTGGGTHHHHCTTCCCSTT-STTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCE--
T ss_pred cCCCCeEEEECCccchhhhhhCcccccccC-CCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCC--
Confidence 999999999988764 2444433332 56899999999999999999999999988766555555567765432
Q ss_pred CCCcccccCCCcccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEee
Q 037144 338 QEPKEQEVGYKDWQITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVT 415 (502)
Q Consensus 338 ~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~ 415 (502)
..+++.++|+. .++++|++++.+|.+++.+++++..+++++|.+.|+++++|+++.+ +.+++++|++.
T Consensus 312 ----------~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~ 381 (502)
T 3hbx_A 312 ----------PTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLK 381 (502)
T ss_dssp ----------EECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEES
T ss_pred ----------CCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEec
Confidence 12456677775 6789999999999999999999999999999999999988999876 78999999986
Q ss_pred cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEe---eeECCEEEEEEEecCCCCcHHHHHHHH
Q 037144 416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTH---AIVGGIYVLRFAAGNSMTMESHVRAAW 492 (502)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~---~~~~g~~~lR~~~~~~~t~~~di~~~~ 492 (502)
+... .+ ...+.+.|.++|+++... ....+..++|++++. .++++|+++++
T Consensus 382 ~~~~------------------------~~--~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~~-~~t~edid~li 434 (502)
T 3hbx_A 382 DSSC------------------------HT--EFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIRE-DFSRTLAERLV 434 (502)
T ss_dssp SCSS------------------------CC--HHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECCT-TCCHHHHHHHH
T ss_pred CCCc------------------------CC--HHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeCC-CCCHHHHHHHH
Confidence 5310 00 236788888889864322 223456899999874 46677999999
Q ss_pred HHHHHHHHh
Q 037144 493 TVVQEHLEA 501 (502)
Q Consensus 493 ~~l~~~~~~ 501 (502)
+.|+++.+.
T Consensus 435 ~~L~~~l~~ 443 (502)
T 3hbx_A 435 IDIEKVMRE 443 (502)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987653
No 10
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-40 Score=349.32 Aligned_cols=390 Identities=16% Similarity=0.209 Sum_probs=301.3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHhhcC-CCCCCCCCcccccCCCC-CCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHH
Q 037144 45 LPESAPYSPESVETILQDVQEHIVP-GITHWQSPNYFAYFPAT-SSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVM 122 (502)
Q Consensus 45 ~~~~~p~~~~~~~~il~~~~~~~~~-~~~~~~~p~~~~~~~~~-~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~ 122 (502)
....+|++|.+.+++++++.+.... ....|.+|+|+|++..+ +.....+.+.+....+.+...|..+|+..++|+++.
T Consensus 34 ~~~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 113 (497)
T 3mc6_A 34 NFPQLPSNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVV 113 (497)
T ss_dssp CCSSCCSSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHH
T ss_pred cccCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHH
Confidence 4467899999999999999987653 56788999999987544 344455566666666667778889999999999999
Q ss_pred HHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCE
Q 037144 123 DWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNI 202 (502)
Q Consensus 123 ~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v 202 (502)
+|+++++|++... ..+++++|||+|+.+++.+++++...+. |.++++|+++..+|.++.++++.+|+ ++
T Consensus 114 ~~la~~~g~~~~~-----~~~~~~~ggt~a~~~a~~a~~~~~~~~~---g~~~~~Vi~~~~~h~~~~~~~~~~G~---~~ 182 (497)
T 3mc6_A 114 SMVLRMFNAPSDT-----GCGTTTSGGTESLLLACLSAKMYALHHR---GITEPEIIAPVTAHAGFDKAAYYFGM---KL 182 (497)
T ss_dssp HHHHHHTTCCTTT-----CCEEEESSHHHHHHHHHHHHHHHHHHHS---CCSSCEEEEETTSCHHHHHHHHHSCC---EE
T ss_pred HHHHHHhCCCCCC-----CeEEEcCcHHHHHHHHHHHHHHHHHhcC---CCCCceEEEeCCccHHHHHHHHHcCC---eE
Confidence 9999999998211 2689999999999999999987644332 22457899999999999999999999 99
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccccc----
Q 037144 203 RAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI---- 278 (502)
Q Consensus 203 ~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~---- 278 (502)
+.||+++ +++.+|+++|+++|+++ +.+|+++.++|++|.++|+++|+++|++||+|+|||+||+++...
T Consensus 183 ~~v~~~~-~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~ 255 (497)
T 3mc6_A 183 RHVELDP-TTYQVDLGKVKKFINKN------TVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEK 255 (497)
T ss_dssp EEECBCT-TTCSBCTTTTGGGCCSS------EEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTT
T ss_pred EEEecCc-ccCcCCHHHHHHHHhhC------CEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhh
Confidence 9999985 25799999999998643 568999999999999999999999999999999999999977553
Q ss_pred -----CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144 279 -----CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT 353 (502)
Q Consensus 279 -----~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 353 (502)
.+.+.. ...++|++++++|||+++|.++|+++++++......+...+.|.... +...++.
T Consensus 256 ~~~~~~~~~~~---~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ 320 (497)
T 3mc6_A 256 AGYKNLPLLDF---RVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGL------------YGSPTLA 320 (497)
T ss_dssp TTCCSCCCCST---TSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTSC------------BCCSSSC
T ss_pred hcccCCccccc---cCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCCC------------cCCcCcc
Confidence 111211 12378999999999999999999999988754322222222222211 1122333
Q ss_pred CCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCC
Q 037144 354 LCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS-DKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGT 431 (502)
Q Consensus 354 ~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~ 431 (502)
++|.. ..+++|++++.++.+++.+++++..++++++++.|++ +|+++++.++..++++|+.....
T Consensus 321 g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~~~~------------- 387 (497)
T 3mc6_A 321 GSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSKTLN------------- 387 (497)
T ss_dssp SSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECTTTT-------------
T ss_pred cCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCCCCC-------------
Confidence 33332 2457999999999999999999999999999999999 79999988888889998754211
Q ss_pred cccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 432 YDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..++.+.|.++|..+... .....+|++++ . +++++++++++.|+++.++
T Consensus 388 ----------------~~~l~~~L~~~Gi~v~~~---~~~~~~ri~~~-~-~t~e~i~~~~~~L~~~l~~ 436 (497)
T 3mc6_A 388 ----------------IHELSDRLSKKGWHFNAL---QKPVALHMAFT-R-LSAHVVDEICDILRTTVQE 436 (497)
T ss_dssp ----------------HHHHHHHHHTTTCBCEEC---CSSCCEEEECC-T-TTTCTHHHHHHHHHHHHHH
T ss_pred ----------------HHHHHHHHHhCCEEEecC---CCCCeEEEEEe-C-CCHHHHHHHHHHHHHHHHH
Confidence 346778888888743221 22336899987 3 5667999999999987653
No 11
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=100.00 E-value=7.6e-40 Score=345.93 Aligned_cols=387 Identities=17% Similarity=0.162 Sum_probs=306.4
Q ss_pred CCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCC-CCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHH
Q 037144 47 ESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPA-TSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWL 125 (502)
Q Consensus 47 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l 125 (502)
..+|++|.+.+++++++.+.+.++...|.+++|+|++.. .+.++..+.+.+....+.+...|..+|...++|.++++|+
T Consensus 69 ~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~l 148 (514)
T 3mad_A 69 ARLPRAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMT 148 (514)
T ss_dssp SSCCSSCCCHHHHHHHHHHHHHHHHHHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhccCCCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHH
Confidence 568999999999999999988888888999999999764 4566778888888888888888889999999999999999
Q ss_pred HHhcCCCC---ccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCE
Q 037144 126 GQMLDLPK---SFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNI 202 (502)
Q Consensus 126 ~~l~g~~~---~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v 202 (502)
++++|++. .. .|++|+|||+|+..++.+++....++. |.++++|+++..+|.++.++++.+|+ ++
T Consensus 149 a~~~g~~~~~~~v------~~~~t~ggt~a~~~al~a~~~~g~~~~---g~~~d~Vi~~~~~~~~~~~~~~~~G~---~v 216 (514)
T 3mad_A 149 AHMLGGDAAGGTV------CGTVTSGGTESLLLAMKTYRDWARATK---GITAPEAVVPVSAHAAFDKAAQYFGI---KL 216 (514)
T ss_dssp HHHTTGGGGTSCC------EEEEESSHHHHHHHHHHHHHHHHHHHH---CCSSCEEEEETTSCTHHHHHHHHHTC---EE
T ss_pred HHHcCCCCccCCc------ceEEcCcHHHHHHHHHHHHHHHhhhhc---CCCCCeEEEeCccchHHHHHHHHcCC---ee
Confidence 99999973 32 569999999999999999987643322 23457899999999999999999999 99
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccccccc----
Q 037144 203 RAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI---- 278 (502)
Q Consensus 203 ~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~---- 278 (502)
+.||+++ +|.+|+++|+++|+++ +.+|+++.++|++|.++|+++|+++|++||+|+|+|+||+++.+.
T Consensus 217 ~~v~~~~--~~~~d~~~Le~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~ 288 (514)
T 3mad_A 217 VRTPLDA--DYRADVAAMREAITPN------TVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAER 288 (514)
T ss_dssp EEECBCT--TSCBCHHHHHHHCCTT------EEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHH
T ss_pred EEeeeCC--CCCCCHHHHHHHhccC------CEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHh
Confidence 9999986 5799999999999653 458999999999999999999999999999999999999987653
Q ss_pred ----CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144 279 ----CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL 354 (502)
Q Consensus 279 ----~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 354 (502)
.+.+.. ...++|++++++||++++|.++|+++++++......+.....|... .+...++.+
T Consensus 289 ~g~~~~~~~~---~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~g 353 (514)
T 3mad_A 289 LGYPVPPFDF---RLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGG------------LYFSPTFAG 353 (514)
T ss_dssp TTCCCCCCST---TSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTC------------SEEESSSCS
T ss_pred cCCCCCcccc---cCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCC------------cccCCccCC
Confidence 111211 2347899999999999999999999998876543221111112111 011223444
Q ss_pred CCCCC-chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcc
Q 037144 355 CRRFR-SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYD 433 (502)
Q Consensus 355 sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 433 (502)
++... .+++|++++.++.+++++++++..++++++.+.|+++++++++.++ .++++|......
T Consensus 354 s~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~~~--------------- 417 (514)
T 3mad_A 354 SRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP-LWVIAVASDELN--------------- 417 (514)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC-SSEEEEECSSSC---------------
T ss_pred CCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC-eEEEEEeCCCCC---------------
Confidence 55433 4789999999999999999999999999999999999999988655 456666543211
Q ss_pred cccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 434 QYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 434 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..++.++|.++|..+ .+ ......+|+++++.++++++|+++++.|+++.++
T Consensus 418 --------------~~~l~~~L~~~Gi~v-~g--~~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~ 468 (514)
T 3mad_A 418 --------------IYQVMEEMAGRGWRL-NG--LHRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQ 468 (514)
T ss_dssp --------------HHHHHHHHHTTTCBC-EE--ETTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHH
T ss_pred --------------HHHHHHHHHhcCCEe-cc--CCCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 246778888888754 22 2323579999988888888999999999987653
No 12
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=100.00 E-value=3.1e-37 Score=313.31 Aligned_cols=305 Identities=12% Similarity=0.089 Sum_probs=235.3
Q ss_pred CCCCCCCCCHHHHHHHHHHhhcCCCCCCC-----------------CCcccccCCCCCCHHHHHHHHHHhhcCCCCcccc
Q 037144 47 ESAPYSPESVETILQDVQEHIVPGITHWQ-----------------SPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWI 109 (502)
Q Consensus 47 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~-----------------~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~ 109 (502)
..+|++|.+.++|...|.+.-.-..++|. .||||||+++. +..+|++.. +. .|.
T Consensus 21 ~~~p~~g~~~~~i~~~l~~~~~~d~~~~~~~~~~geregrv~~~~~~~r~~g~~hg~----~~~~d~l~~----~~-~~~ 91 (450)
T 3bc8_A 21 GKCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGI----GRSGDISAV----QP-KAA 91 (450)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCB----CC-----------CC-SBH
T ss_pred ccCCccCCCHHHHHHHHHHHhhCCCCccccccccCcccceEecccccCCccceecch----hHHHHHHHh----Cc-ccc
Confidence 46899999999999888876444444553 17999999876 345577666 33 788
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCch-HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTC-EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF 188 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt-~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (502)
.+|+...+|+.+..|+.+++|+|..+ ++++++|+| +++.+++.++|+... +++.|+++..+|.|+
T Consensus 92 ~~~~~~~~e~~~~~~~~~~lGlp~~~------~~~lV~GaT~~~~a~~L~aar~~~~--------~~~~viv~r~aHkSv 157 (450)
T 3bc8_A 92 GSSLLNKITNSLVLNVIKLAGVHSVA------SCFVVPMATGMSLTLCFLTLRHKRP--------KAKYIIWPRIDQKSC 157 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTCC------EEEEESSCHHHHHHHHHHHHHHHCT--------TCCEEEEECCCCHHH
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCc------eEEEECCHHHHHHHHHHHHcchhhc--------CCCEEEEECCcHHHH
Confidence 89999999999999999999999875 678999998 778888888876310 235667778899999
Q ss_pred HHHHHHcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144 189 QKAAQIVGIDRKNIRAIKTTK-SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 189 ~~aa~~~Glg~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh 267 (502)
.+++.++|+ ..+.|+... ++.+.||+++|+++|+++.. ..+++|+.+.+++.+|.+|||++|+++|++||+|+|
T Consensus 158 ~kAl~l~Gl---~p~~v~~~~~~~~~~id~~~le~aI~~~~~--~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~ 232 (450)
T 3bc8_A 158 FKSMVTAGF---EPVVIENVLEGDELRTDLKAVEAKIQELGP--EHILCLHSTTACFAPRVPDRLEELAVICANYDIPHV 232 (450)
T ss_dssp HHHHHHTTC---EEEEECCEEETTEEECCHHHHHHHHHHHCG--GGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEE
T ss_pred HHHHHHcCC---eeEEEEeeecCccCCcCHHHHHHHHHhcCC--CCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEE
Confidence 999999999 777775521 23689999999999988642 146788888787778899999999999999999999
Q ss_pred eecccccccccCccchhhhcCC--CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144 268 VDAAYAGSACICPEFRHFIDGV--ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV 345 (502)
Q Consensus 268 VDaA~g~~~~~~~~~~~~~~~~--~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (502)
||+|||+...+.++.. ..++ ++||+++.|+|||+++|.+++++++|++..+.... ..|.....
T Consensus 233 VD~A~G~~~~~~~~l~--~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~---~~~~g~~s---------- 297 (450)
T 3bc8_A 233 VNNAYGLQSSKCMHLI--QQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDIS---KMYPGRAS---------- 297 (450)
T ss_dssp EECTTTTTCHHHHHHH--HHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHH---HHSCSCBC----------
T ss_pred EECCCchhhhhhHhHH--HHHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHH---HHhhcCCc----------
Confidence 9999998765432211 0223 58999999999999999999999999887654332 22332110
Q ss_pred CCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCC
Q 037144 346 GYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK---RFEVAFPR 405 (502)
Q Consensus 346 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---~~~l~~~~ 405 (502)
+ ..++++|.++..+|.+++++.+++..++++++++.|++++ ++.++..+
T Consensus 298 ---------~--SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~ 349 (450)
T 3bc8_A 298 ---------A--SPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTP 349 (450)
T ss_dssp ---------S--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCT
T ss_pred ---------c--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCc
Confidence 0 1358999999999999999999999999999999999988 88887644
No 13
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.7e-35 Score=301.11 Aligned_cols=381 Identities=18% Similarity=0.204 Sum_probs=290.4
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHH
Q 037144 48 SAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQ 127 (502)
Q Consensus 48 ~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~ 127 (502)
.+|+.|.+.+++++++.+.. +...+|.+|.|+++..+++. | .+.+.+...+..+...+...|...+++.++.+++++
T Consensus 4 ~lp~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~-~-~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~ 80 (397)
T 3f9t_A 4 NMQEKGVSEKEILEELKKYR-SLDLKYEDGNIFGSMCSNVL-P-ITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGS 80 (397)
T ss_dssp SCCSSCCCHHHHHHHHHHHH-TTSCCGGGTCBCSCSCCCCC-T-HHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCeEEEecCCCc-H-HHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHH
Confidence 57899999999999999864 66677888999999866544 3 346666666665544455667889999999999999
Q ss_pred hcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH--hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEE
Q 037144 128 MLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK--IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAI 205 (502)
Q Consensus 128 l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~--~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v 205 (502)
++|.+.. .+++|+|||+|+..++.+++..+... .+....+++.|+++..+|+++.++++.+|+ +++.+
T Consensus 81 ~~~~~~~-------~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v 150 (397)
T 3f9t_A 81 LLNNKDA-------YGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDL---EYIYA 150 (397)
T ss_dssp HTTCTTC-------EEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTC---EEEEE
T ss_pred HhCCCCC-------CEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCc---eeEEE
Confidence 9999764 58999999999999999887653211 111122578899999999999999999999 99999
Q ss_pred ecCCCCCcccCHHHHHHHHHH-HHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchh
Q 037144 206 KTTKSSSYGLSAESVLSQINL-DVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRH 284 (502)
Q Consensus 206 ~~~~~~~~~~d~~~Le~~i~~-~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~ 284 (502)
|+++ ++.+|+++|+++|++ ++ .+|+++.++|++|.+.|+++|.++|++||+|+|+|++|+++.+.......
T Consensus 151 ~~~~--~~~~d~~~l~~~i~~~~~------~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~ 222 (397)
T 3f9t_A 151 PIKE--DYTIDEKFVKDAVEDYDV------DGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKY 222 (397)
T ss_dssp CBCT--TSSBCHHHHHHHHHHSCC------CEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGG
T ss_pred eeCC--CCcCCHHHHHHHHhhcCC------eEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhccccc
Confidence 9985 579999999999987 33 47888899999999999999999999999999999999887653221100
Q ss_pred -------hhc-CCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC
Q 037144 285 -------FID-GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR 356 (502)
Q Consensus 285 -------~~~-~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr 356 (502)
.+. .. ++|++++++||+++.|.++|+++++++... +.+....+|+.... .....+++
T Consensus 223 ~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~-------------~~~~~~~~ 287 (397)
T 3f9t_A 223 KKKGVNYKFDFSL-GVDSITIDPHKMGHCPIPSGGILFKDIGYK-RYLDVDAPYLTETR-------------QATILGTR 287 (397)
T ss_dssp CCTTCCCCCSGGG-TCSEEECCTTTTTCCCSSCEEEEESSGGGG-GGTCEECTTSSSSE-------------ECSSCSSC
T ss_pred ccccccccccccc-cCCeEEEccccccCCCCCceEEEEeCHHHH-HhhccCCccccCCC-------------cccccccc
Confidence 000 12 689999999999999999999999877543 23322234443211 11222333
Q ss_pred C-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccc
Q 037144 357 R-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQY 435 (502)
Q Consensus 357 ~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 435 (502)
. ...+.+|++++.++..++.+++++..++++++.+.|+++ +++++.++..++++|....
T Consensus 288 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~------------------- 347 (397)
T 3f9t_A 288 VGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN-NFKPVIEPILNIVAIEDED------------------- 347 (397)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCCSSSEEEEECTT-------------------
T ss_pred ccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcCCCccEEEEEeCC-------------------
Confidence 3 245788889988888999999999999999999999998 8887777888888876532
Q ss_pred cccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 436 RQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 436 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
..++.+.+.++|..+ .+.. ...++|++++ ..+++++++++++.|+++.+
T Consensus 348 ------------~~~~~~~l~~~gi~v-~~~~--~~~~~Ri~~~-~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 348 ------------YKEVCKKLRDRGIYV-SVCN--CVKALRIVVM-PHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp ------------HHHHHHHHHHTTCBC-EECS--SSSEEEEECC-TTCCHHHHHHHHHHHHHHC-
T ss_pred ------------HHHHHHHHHhCCeEE-eccC--CCCEEEEEEc-CCCCHHHHHHHHHHHHHhhC
Confidence 245677777778643 3321 2468999986 55678899999999998754
No 14
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=100.00 E-value=8.4e-37 Score=317.65 Aligned_cols=396 Identities=12% Similarity=0.093 Sum_probs=276.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccC
Q 037144 4 AYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYF 83 (502)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~ 83 (502)
+-++.|.+.+++++....++++++-. ...+|++|.+.+++.+.+.+...... ..|+++.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~lp~~g~~~~~i~~~~~~~~~~~~-----~~yld~a 87 (456)
T 2z67_A 29 LIPKNMEKRGELVLNEYLKEIEDVFN----------------HRKIPENGIDDEKIKLFLKFLSMMDT-----DKDPKSV 87 (456)
T ss_dssp SSCHHHHHHHHHHHHHHTHHHHHHHH----------------HCSCCSSCCCHHHHHHHHHHHHTTBG-----GGCTTCE
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhhc----------------cCCCCCCCCCHHHHHHHHHHHHhccc-----ccccccc
Confidence 33567888888887776666654321 13468889999888887776543221 2355544
Q ss_pred CCCCCHHHHHHHHHHh----hcC----------CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCc
Q 037144 84 PATSSVAGIVGEMLSS----GFN----------VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTT 149 (502)
Q Consensus 84 ~~~~~~~~~~~~~l~~----~~n----------~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~gg 149 (502)
..++.++.++..+... .++ .+. .|..+|.+.++++++++|+++++|++. .+++|+||
T Consensus 88 a~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~g~~~--------~~~~t~g~ 158 (456)
T 2z67_A 88 RIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQP-KASGASIMYALTNKILESFFKQLGLNV--------HAIATPIS 158 (456)
T ss_dssp ECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCT-TBHHHHHHHHHHHHHHHHHHHHTTCCC--------EEEEESSC
T ss_pred ccccccccccccccCccccccCCCccHHHHHHhhCc-ccccCcHHHHHHHHHHHHHHHHcCCCC--------CEEEeCcH
Confidence 3333333222222111 111 122 456677789999999999999999975 27999999
Q ss_pred h-HHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHH
Q 037144 150 C-EALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK-SSSYGLSAESVLSQINLD 227 (502)
Q Consensus 150 t-~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~ 227 (502)
| ++|+.++.+++... ++.+|+++...|+|+.++++..|+ +++.+++.+ +++|.+|+++|+++|++.
T Consensus 159 te~a~~~al~~~~~~~---------~~~~vi~~~~~h~s~~~~~~~~G~---~~~~v~~~~~~~~~~~d~~~l~~~i~~~ 226 (456)
T 2z67_A 159 TGMSISLCLSAARKKY---------GSNVVIYPYASHKSPIKAVSFVGM---NMRLVETVLDGDRVYVPVEDIENAIKKE 226 (456)
T ss_dssp HHHHHHHHHHHHHHHH---------CCCEEEEECCCCHHHHHHHHHTTC---EEEEECCEEETTEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc---------CCCEEEEECCCcHHHHHHHHHcCC---CceEEEEeccCCCCCcCHHHHHHHHHHH
Confidence 9 67777877765521 345667677799999999999999 999988732 236899999999999432
Q ss_pred HhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccc-cCccchhhhcCCCCCCeeEEccCCcCCCC
Q 037144 228 VEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSAC-ICPEFRHFIDGVECVDSFSFNPHKWLFTT 306 (502)
Q Consensus 228 ~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~-~~~~~~~~~~~~~~aDsi~~~~hK~l~~p 306 (502)
..++ .+++|+.+.++|++|.++|+++|+++|+++|+|+|||+||++... ..+.....+.+ ++|++++++|||+++|
T Consensus 227 ~~~~-~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~--~~D~~~~s~hK~~~~p 303 (456)
T 2z67_A 227 IELG-NRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY--RVDAVVSSSDKNLLTP 303 (456)
T ss_dssp HHTT-CCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS--CCSEEEEEHHHHHCCC
T ss_pred hhCC-CeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC--CCCEEEEcCCCCcCCC
Confidence 2122 467888899999999999999999999999999999999987765 22332222333 7999999999999999
Q ss_pred CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHH
Q 037144 307 LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMA 386 (502)
Q Consensus 307 ~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la 386 (502)
.++|++++|++..+.. + .+.|..... ...++++|+++..+|.++++++.++..+++
T Consensus 304 ~g~G~l~~~~~~~~~~-l--~~~~~g~~~---------------------~~~~~~~~aal~~l~~~~~~~~~~~~~~~~ 359 (456)
T 2z67_A 304 IGGGLVYSTDAEFIKE-I--SLSYPGRAS---------------------ATPVVNTLVSLLSMGSKNYLELVKNQKNSK 359 (456)
T ss_dssp SSCEEEEESCHHHHHH-H--HTTSCSCBC---------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcCHHHHhh-c--CcCCCCCCC---------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987655432 2 223332100 012678999999999999999999999999
Q ss_pred HHHHHHHhcCC---CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE--
Q 037144 387 KLFERLVTSDK---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV-- 461 (502)
Q Consensus 387 ~~l~~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~-- 461 (502)
+++.+.|++++ |+.++ ++. ++++|.+.... . ..++.++|.++|..
T Consensus 360 ~~l~~~L~~~~~~~g~~v~-~~~-~~v~~~~~~~~--------------------------~--~~~l~~~L~~~gi~~~ 409 (456)
T 2z67_A 360 KLLDELLNDLSKKTGGKFL-DVE-SPIASCISVNS--------------------------D--PVEIAAKLYNLRVTGP 409 (456)
T ss_dssp HHHHHHHHHHHHHSSCCBC-CCC-CSSEEEEECSS--------------------------C--HHHHHHHHHHTTEESC
T ss_pred HHHHHHHHhcccccCCEec-CCC-CeEEEEEeccc--------------------------H--HHHHHHHHHHcCCCcc
Confidence 99999999886 77665 444 88888773221 0 23456666666631
Q ss_pred EEE-------ee--eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 462 FMT-------HA--IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 462 ~~~-------~~--~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
-+. +. ......++|++++ ..++++|||+++++|+++.
T Consensus 410 rv~~~~g~f~G~~~~~~~~~~vr~s~~-~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 410 RGIKKTDHFGNCYLGTYTHDYIVMNAA-IGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp EEECTTCHHHHTCSSCCSCCEEEEECC-TTCCHHHHHHHHHHHHTC-
T ss_pred eEEeecCccccccccccCcchhhhhhh-cCCCHHHHHHHHHHHHHHh
Confidence 111 00 0112468999975 5677889999999998754
No 15
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=100.00 E-value=9.6e-31 Score=273.30 Aligned_cols=393 Identities=12% Similarity=0.081 Sum_probs=264.4
Q ss_pred chhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccc-cChhhHH
Q 037144 38 PGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWI-SSPAAVE 116 (502)
Q Consensus 38 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~-~~p~~~~ 116 (502)
|+.++...+..+| +.+..++++++.+....+...+.+..|+| .......|.++.++.....+-+..... .+++..+
T Consensus 31 p~~~~~~~~~~lp--~~~e~~~~~~~~~l~~~~~~~~~~~~~lg-~~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~ 107 (474)
T 1wyu_B 31 PKEHLREVPPRLP--EVDELTLVRHYTGLSRRQVGVDTTFYPLG-SCTMKYNPKLHEEAARLFADLHPYQDPRTAQGALR 107 (474)
T ss_dssp CGGGBCSSCCCCC--CCCHHHHHHHHHHHHTTCCCTTTSCCCBT-TTCCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHH
T ss_pred CHHHhccCCCCCC--CCCHHHHHHHHHHHHhCCCCcccCccccc-cccccCCHHHHHHHHHHHHhcCCCCchhhChHHHH
Confidence 4555544455688 79999999999988766655455667777 333344456555555442222222222 5788899
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G 196 (502)
++.++.+|+++++|++. ..++|+|||+|+..++.+++.....+ |. ..++..|+++...|.++.++++..|
T Consensus 108 l~~~l~~~la~~~g~~~--------~~~~~~ggt~a~~~al~~~~~~~~~~-Gd-~~~r~~Vlv~~~~h~~~~~~~~~~G 177 (474)
T 1wyu_B 108 LMWELGEYLKALTGMDA--------ITLEPAAGAHGELTGILIIRAYHEDR-GE-GRTRRVVLVPDSAHGSNPATASMAG 177 (474)
T ss_dssp HHHHHHHHHHHHHTCSE--------EECCCSSHHHHHHHHHHHHHHHHHHT-TC-TTTCCEEEEETTSCTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCc--------eeecChHHHHHHHHHHHHHHHHHHhc-CC-ccCCCEEEEeCCcChhhHHHHHHCC
Confidence 99999999999999874 35788999999999998887643321 10 0123478889999999999999999
Q ss_pred CCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-CChhHHHHHHHHhCCEEEeecccccc
Q 037144 197 IDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-DPLKPLCDVAKQFGIWVHVDAAYAGS 275 (502)
Q Consensus 197 lg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-dpl~eI~~i~~~~g~~lhVDaA~g~~ 275 (502)
+ +++.||+++ +|.+|+++|+++|++++ .+|+++.++ ++|.+ +|+++|+++|++||+|+|+|++|+.+
T Consensus 178 ~---~vv~v~~~~--~~~~d~~~L~~~i~~~t------~~v~~~~pn-~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~ 245 (474)
T 1wyu_B 178 Y---QVREIPSGP--EGEVDLEALKRELGPHV------AALMLTNPN-TLGLFERRILEISRLCKEAGVQLYYDGANLNA 245 (474)
T ss_dssp C---EEEEECBCT--TSSBCHHHHHHHCSTTE------EEEEECSSC-TTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGG
T ss_pred C---EEEEecCCC--CCCcCHHHHHHhhCCCc------eEEEEECCC-CCcccCCCHHHHHHHHHHcCCEEEEeCchhhh
Confidence 9 999999975 57999999999996543 377778774 69999 89999999999999999999999765
Q ss_pred cccCccchhhhcCCCCCCeeEEccCCcCCCCC-----cceEEEeeCchhhhhhhcCC------cccccCccCCCCCcccc
Q 037144 276 ACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-----DCCCLWVKDPSCLLSTLSTN------PQYLKNEATDQEPKEQE 344 (502)
Q Consensus 276 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-----~~g~~~~r~~~~l~~~~~~~------~~yl~~~~~~~~~~~~~ 344 (502)
.+..-..... ++|++++++||++++|. ++|++++++.. + +.+... ..|....... ..
T Consensus 246 ~~g~~~~~~~-----g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l-~-~~l~~~~~~~~g~~~~~~~~~~-----~~ 313 (474)
T 1wyu_B 246 IMGWARPGDM-----GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHL-A-PYLPVPLVERGEEGFYLDFDRP-----KS 313 (474)
T ss_dssp TTTTCCHHHH-----TCSEEECCTTTTTCCCCTTSCCCCCCEEECGGG-G-GGCCSCEEEECSSCEEEECCCT-----TC
T ss_pred hccCCCcccC-----CCcEEEEeCccccccCCCCCCCCeEEEEEcHHH-H-HhCCCCeeeccCCeeEecccCc-----cc
Confidence 5311111111 68999999999999985 68999987642 2 222110 0111000000 00
Q ss_pred cCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-CeeEEEEEeecCcchhhh
Q 037144 345 VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-NFSLVCFRVTPSAVMDKL 423 (502)
Q Consensus 345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-~~~~v~f~~~~~~~~~~~ 423 (502)
...+...+.......++|..++.+|.+++++..++..++++++.+.|++. ++++..++ .+..+++.+ +.+.
T Consensus 314 --~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~~~~---- 385 (474)
T 1wyu_B 314 --IGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK-GYRVPYDGPSMHEFVAQP-PEGF---- 385 (474)
T ss_dssp --CCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCSSCSSCCSCEEEBC-STTC----
T ss_pred --CcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcEecCCCCcceEEEEEc-CCCC----
Confidence 00000001111223466777777789999999999999999999999987 88874332 232233333 2110
Q ss_pred hhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 424 RTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
...++.++|.++|... ....+. ...++|++++. .++++++++++++|+++.+
T Consensus 386 -----------------------~~~~l~~~L~~~Gi~~-~~~~~~~~~~~~lRis~~~-~~t~e~id~~~~~L~~~~~ 439 (474)
T 1wyu_B 386 -----------------------RALDLAKGLLELGFHP-PTVYFPLIVKEALMVEPTE-TEAKETLEAFAEAMGALLK 439 (474)
T ss_dssp -----------------------CHHHHHHHHHHTTCCC-CEESCSTTSTTCEEECCCT-TSCHHHHHHHHHHHHHHHT
T ss_pred -----------------------CHHHHHHHHHHCCccc-cccccccccCCEEEEEeec-CCCHHHHHHHHHHHHHHHH
Confidence 0245677777778752 221121 24689999864 4567799999999998764
No 16
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.97 E-value=4.3e-29 Score=255.51 Aligned_cols=359 Identities=13% Similarity=0.028 Sum_probs=246.1
Q ss_pred CCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHH
Q 037144 75 QSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALL 154 (502)
Q Consensus 75 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~ 154 (502)
.+|.++-+.+++..++..+.+.+...+ ... .++....+..++.+++++++|.+... ..++++||++|+.
T Consensus 10 ~~~~~~~~~pgp~~~~~~v~~a~~~~~---~~~--~~~~~~~~~~~~~~~la~~~~~~~~~------~v~~~~sgt~al~ 78 (411)
T 3nnk_A 10 NPPSRLLMGPGPINADPRVLRAMSSQL---IGQ--YDPAMTHYMNEVMALYRGVFRTENRW------TMLVDGTSRAGIE 78 (411)
T ss_dssp CCCCCEEESSSCCCCCHHHHHHHTSCC---CCT--TCHHHHHHHHHHHHHHHHHHTCCCSE------EEEEESCHHHHHH
T ss_pred CCccceeecCCCCCCCHHHHHHhhccc---ccc--ccHHHHHHHHHHHHHHHHHhCCCCCc------EEEECCCcHHHHH
Confidence 467777777777666666666655432 111 24666678889999999999997642 3688899999998
Q ss_pred HHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCC
Q 037144 155 CTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAEL 232 (502)
Q Consensus 155 ~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~ 232 (502)
.++.+... +++.|+++..+|++ +..+++..|+ +++.+|++. ++.+|+++|+++|++..
T Consensus 79 ~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~---- 138 (411)
T 3nnk_A 79 AILVSAIR-----------PGDKVLVPVFGRFGHLLCEIARRCRA---EVHTIEVPW--GEVFTPDQVEDAVKRIR---- 138 (411)
T ss_dssp HHHHHHCC-----------TTCEEEEEECSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHHC----
T ss_pred HHHHHhcC-----------CCCEEEEecCCchHHHHHHHHHHcCC---eEEEEecCC--CCCCCHHHHHHHHhhCC----
Confidence 88776632 67788889999988 8889999999 999999975 56899999999998631
Q ss_pred ccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEE
Q 037144 233 IPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCL 312 (502)
Q Consensus 233 ~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~ 312 (502)
+.+|+++.++|++|.+.|+++|+++|++||+|+|+|++++.+....+. .. .++|++++++|||+++|.++|++
T Consensus 139 -~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~-~~-----~~~d~~~~s~~K~l~~~~g~g~~ 211 (411)
T 3nnk_A 139 -PRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLET-DV-----WGLDAVSAGMQKCLGGPSGTSPI 211 (411)
T ss_dssp -CSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCT-TT-----TTCSEEECCSTTTTCCCSSEEEE
T ss_pred -CeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccch-hc-----cCCcEEEecCccccCCCCceEEE
Confidence 348888999999999999999999999999999999998776543321 11 16899999999999889899999
Q ss_pred EeeCchhhhhhhcC---CcccccCccCC---CCCcccccCCC-------ccccc-CCCC-CCchHHHHHHHHhcHHHHHH
Q 037144 313 WVKDPSCLLSTLST---NPQYLKNEATD---QEPKEQEVGYK-------DWQIT-LCRR-FRSLKLWVVIRNFGVANLRN 377 (502)
Q Consensus 313 ~~r~~~~l~~~~~~---~~~yl~~~~~~---~~~~~~~~~~~-------~~~~~-~sr~-~~al~~~~~l~~~g~~g~~~ 377 (502)
++++.. ....... .+.|....... ........+.. ..... .+.. .....+..+++.+..+|+++
T Consensus 212 ~~~~~~-~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~ 290 (411)
T 3nnk_A 212 TLSARM-EEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDY 290 (411)
T ss_dssp EECHHH-HHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred EECHHH-HHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHH
Confidence 886542 2211111 11222111000 00000000000 00000 1111 12234556666666677899
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEecCCC---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHH
Q 037144 378 FIRSHVGMAKLFERLVTSDKRFEVAFPRN---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLES 454 (502)
Q Consensus 378 ~~~~~~~la~~l~~~l~~~~~~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 454 (502)
+.++..++++++.+.|++. ++++..++. .++++|.++.. . + ..++.+.
T Consensus 291 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~-------------------------~--~~~l~~~ 341 (411)
T 3nnk_A 291 GIARHKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVVIPQG-I-------------------------N--GDQARKL 341 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEECCTT-C-------------------------C--HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEECCCC-C-------------------------C--HHHHHHH
Confidence 9999999999999999987 888765432 45677766421 1 0 2356666
Q ss_pred HHhc-CcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 455 INVS-GKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 455 l~~~-g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
|.++ |..+.++....+..++|++++++.+++++|+++++.|+++.++
T Consensus 342 l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~ 389 (411)
T 3nnk_A 342 MLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNY 389 (411)
T ss_dssp HHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHH
Confidence 6666 7654333222234589999866777888999999999998764
No 17
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.97 E-value=4.2e-29 Score=255.95 Aligned_cols=356 Identities=12% Similarity=0.074 Sum_probs=240.9
Q ss_pred CCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144 74 WQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL 153 (502)
Q Consensus 74 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~ 153 (502)
..+|.++.+.+++..++..+.+.+... ... ..++...++..++++++++++|.+... ..++++|||+++
T Consensus 7 ~~~~~~~~~~p~p~~~~~~v~~a~~~~---~~~--~~~~~~~~~~~~l~~~la~~~g~~~~~------~~~~~~s~t~al 75 (416)
T 3isl_A 7 LCTPLRTIMTPGPVEVDPRVLRVMSTP---VVG--QFDPAFTGIMNETMEMLRELFQTKNRW------AYPIDGTSRAGI 75 (416)
T ss_dssp CCCCCCEECSSSSCCCCHHHHHHTTSC---CCC--TTSHHHHHHHHHHHHHHHHHTTCCCSE------EEEEESCHHHHH
T ss_pred cCcccceeecCCCcCcCHHHHHHhccc---CCC--CccHHHHHHHHHHHHHHHHHhCCCCCc------EEEecCcHHHHH
Confidence 345666667666655555555544331 111 223555778889999999999987642 234889999999
Q ss_pred HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC
Q 037144 154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE 231 (502)
Q Consensus 154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g 231 (502)
..++.+... +++.|+++..+|++ +.++++..|+ +++.+|++. ++.+|+++|+++|++..
T Consensus 76 ~~~~~~l~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~--- 136 (416)
T 3isl_A 76 EAVLASVIE-----------PEDDVLIPIYGRFGYLLTEIAERYGA---NVHMLECEW--GTVFDPEDIIREIKKVK--- 136 (416)
T ss_dssp HHHHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHHC---
T ss_pred HHHHHHhcC-----------CCCEEEEecCCcccHHHHHHHHhcCC---eeEEEecCC--CCCCCHHHHHHHHhhCC---
Confidence 877766532 67788888899998 7788999999 999999986 45899999999998421
Q ss_pred CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceE
Q 037144 232 LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCC 311 (502)
Q Consensus 232 ~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~ 311 (502)
+.+|++++++|++|.+.|+++|+++|++||+++|+|++|+.+....+. .. .++|++++++|||+++|.++|+
T Consensus 137 --~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-~~-----~~~d~~~~s~~K~l~g~~g~g~ 208 (416)
T 3isl_A 137 --PKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKV-DE-----WKIDAAIGGTQKCLSVPSGMAP 208 (416)
T ss_dssp --CSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCT-TT-----TTCSEEECCSSSTTCCCSSEEE
T ss_pred --CcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcch-hh-----cCCCEEEecCccccCCCCCeEE
Confidence 248999999999999999999999999999999999999765544321 11 1689999999999999999999
Q ss_pred EEeeCchhhhhhhcCC----cc--------cccCccCCCCCcccccCC-------CcccccC-CCC-CCchHHHHHHHHh
Q 037144 312 LWVKDPSCLLSTLSTN----PQ--------YLKNEATDQEPKEQEVGY-------KDWQITL-CRR-FRSLKLWVVIRNF 370 (502)
Q Consensus 312 ~~~r~~~~l~~~~~~~----~~--------yl~~~~~~~~~~~~~~~~-------~~~~~~~-sr~-~~al~~~~~l~~~ 370 (502)
+++++.. .. .+... .. +....... .....+. ....+.. +.. .....++.+++.+
T Consensus 209 ~~~~~~~-~~-~~~~~~~~~~Gw~~~~~~~~~~gg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~ 283 (416)
T 3isl_A 209 ITYNERV-AD-VIAARKKVERGIATQADRAALSGNRPI---TSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLV 283 (416)
T ss_dssp EEECHHH-HH-HHHTC------------------CCCC---SCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHH
T ss_pred EEECHHH-HH-HhhccccccccccccccchhccCCCCC---CccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHH
Confidence 9886542 22 22110 00 00000000 0000000 0001111 111 1223555666666
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHH
Q 037144 371 GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEF 447 (502)
Q Consensus 371 g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (502)
...|++++.++..++++++.+.|++. ++++..++. ..+++|.++... +
T Consensus 284 ~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~--------------------------~-- 334 (416)
T 3isl_A 284 LEEGLETRFERHRHHEAALAAGIKAM-GLRLFGDDSCKMPVVTCVEIPGGI--------------------------D-- 334 (416)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCTTEEEEECCTTC--------------------------C--
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCccccCCcEEEEeCCCCC--------------------------C--
Confidence 66678999999999999999999996 888875432 356777764211 0
Q ss_pred HHHHHHHHHhc-CcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 448 NRELLESINVS-GKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 448 ~~~l~~~l~~~-g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..++.+.|.++ |..+.++....+..++|++++.+.+++++|++++++|+++.++
T Consensus 335 ~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~ 389 (416)
T 3isl_A 335 GESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLR 389 (416)
T ss_dssp HHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHH
Confidence 24567777666 7543322211235689999976777776699999999998764
No 18
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.96 E-value=5.8e-28 Score=249.81 Aligned_cols=378 Identities=14% Similarity=0.104 Sum_probs=241.9
Q ss_pred CchhHhhcCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCC---CCHHHHHHHHH--HhhcCC-CCccccc
Q 037144 37 EPGYLKKRLPESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPAT---SSVAGIVGEML--SSGFNV-VGLDWIS 110 (502)
Q Consensus 37 ~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~---~~~~~~~~~~l--~~~~n~-~~~~~~~ 110 (502)
-|+.++.. +..+| +|.+..++++++.....++.. +|..|...+ ...|..+.+++ ...+.. +......
T Consensus 30 ~p~~~~~~-~~~lp-~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~ 102 (438)
T 1wyu_A 30 LPKEILSP-PIDLP-EPLPEWKVLEELRRLAAQNLP-----AHKAFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEV 102 (438)
T ss_dssp SCGGGSSC-CCCCC-CCCCHHHHHHHHHHHHHTSCC-----CTTCCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGG
T ss_pred CcHHHhcC-CCCCC-CCCCHHHHHHHHHHHHhcCcC-----ccccccCCCccCCcCcHHHHHHHhcchhhhcCCCCcchh
Confidence 37777777 77899 789999999999876554422 233333222 22445544443 222222 1111235
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH
Q 037144 111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK 190 (502)
Q Consensus 111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 190 (502)
+++..+++.++.+++++++|++.. ++++++|+|.++..++.+.+.. ++++|+++...|.++..
T Consensus 103 ~~g~~~~~~~~~~~la~~~g~~~~-------~i~~~~g~taa~ea~~~a~~~~----------~gd~Viv~~~~h~s~~~ 165 (438)
T 1wyu_A 103 SQGVLQATFEYQTMIAELAGLEIA-------NASMYDGATALAEGVLLALRET----------GRMGVLVSQGVHPEYRA 165 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSSEE-------CSCBSSHHHHHHHHHHHHHHHH----------TCCEEEEETTSCHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHhCCCcc-------ceEEeCcHHHHHHHHHHHHhcC----------CCCEEEEcCccCHhHHH
Confidence 778889999999999999999754 4688898884433222222221 57789999999998775
Q ss_pred HH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144 191 AA----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV 266 (502)
Q Consensus 191 aa----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l 266 (502)
++ +..|+ +++.+|++ ++.+|+++ |++ .+.+|+++++ |++|.++|+++|+++|+++|+|+
T Consensus 166 ~~~~~a~~~G~---~v~~v~~~---~~~~d~~~----i~~------~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~v 228 (438)
T 1wyu_A 166 VLRAYLEAVGA---KLLTLPLE---GGRTPLPE----VGE------EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALF 228 (438)
T ss_dssp HHHHHHHHTTC---EEEEECCB---TTBCCCCC----CCT------TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHCCC---EEEEEcCc---CCccCHHH----hCC------CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEE
Confidence 44 55899 99999973 45888776 432 2458888888 99999999999999999999999
Q ss_pred Eeecc-cccccccCccchhhhcCCCCCCeeEEccCC-----cCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCC-
Q 037144 267 HVDAA-YAGSACICPEFRHFIDGVECVDSFSFNPHK-----WLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE- 339 (502)
Q Consensus 267 hVDaA-~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK-----~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~- 339 (502)
|||.. ++.+.+..+ ... ++|+++++.|| |+++| ++|++++++. ... .+ +.++.....+..
T Consensus 229 ivd~d~~a~g~~~~~--~~~-----g~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~-~~~-~l---~~~~~g~~~~~~~ 295 (438)
T 1wyu_A 229 VAVADPLSLGVLKPP--GAY-----GADIAVGDGQSLGLPMGFGGP-HFGFLATKKA-FVR-QL---PGRLVSETVDVEG 295 (438)
T ss_dssp EEECCTTGGGTBCCH--HHH-----TCSEEEEECTTTTCCCGGGCS-CCEEEEECGG-GGG-GC---CSCCEEEEEBTTS
T ss_pred EEEechhhccCcCCC--ccC-----CCCEEEECCcccCCCccCCCC-CeeEEEEcHH-HHH-hC---CCceeccccccCC
Confidence 96643 322222233 221 79999999888 67778 8999988754 222 22 222211000000
Q ss_pred CcccccCC--Ccc--cc-cCCCCC---Cc-hHHHHH--HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCe
Q 037144 340 PKEQEVGY--KDW--QI-TLCRRF---RS-LKLWVV--IRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNF 407 (502)
Q Consensus 340 ~~~~~~~~--~~~--~~-~~sr~~---~a-l~~~~~--l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~ 407 (502)
...-.+++ ... .. ..+... .+ .+++++ +..++.+|++++.++..++++++.+.|+++||+++..+ +.+
T Consensus 296 ~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 375 (438)
T 1wyu_A 296 RRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFF 375 (438)
T ss_dssp CEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBC
T ss_pred CcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCCeE
Confidence 00000000 000 00 011111 11 233333 77788899999999999999999999999999999865 344
Q ss_pred eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEE-EEeeeECCEEEEEEEecCCCCcHH
Q 037144 408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVF-MTHAIVGGIYVLRFAAGNSMTMES 486 (502)
Q Consensus 408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~~~g~~~lR~~~~~~~t~~~ 486 (502)
.+++|+.... ..++.++|.++|..+ +.++.+.+..++|+|++ ..++++
T Consensus 376 ~~~~~~~~~~------------------------------~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~-~~~t~e 424 (438)
T 1wyu_A 376 NEFALALPKD------------------------------PEAVRRALAERGFHGATPVPREYGENLALFAAT-ELHEEE 424 (438)
T ss_dssp SEEEEECSSC------------------------------HHHHHHHHHHTTCCCCEECCTTSCSSEEEEECC-TTCCHH
T ss_pred EEEEEeCCCC------------------------------HHHHHHHHHHCCceeccccccccCCCeEEEEec-ccCCHH
Confidence 5566654211 245677777778653 12333233568999987 567788
Q ss_pred HHHHHHHHHHHHH
Q 037144 487 HVRAAWTVVQEHL 499 (502)
Q Consensus 487 di~~~~~~l~~~~ 499 (502)
|+++++++|+++.
T Consensus 425 di~~~~~~l~~~l 437 (438)
T 1wyu_A 425 DLLALREALKEVL 437 (438)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998764
No 19
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.96 E-value=4.5e-28 Score=244.89 Aligned_cols=340 Identities=13% Similarity=0.097 Sum_probs=233.8
Q ss_pred ccccCCCCCCHHHHHHHHHHhh---cCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHH
Q 037144 79 YFAYFPATSSVAGIVGEMLSSG---FNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLC 155 (502)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~---~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~ 155 (502)
|+++..+++.++.++..+.... .......|..+.....+..++.+++++++|.+.+ .+++|+||++|+..
T Consensus 3 yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-------~i~~~~g~~~a~~~ 75 (382)
T 4hvk_A 3 YFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG-------TVVFTSGATEANNL 75 (382)
T ss_dssp BCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTE-------EEEEESSHHHHHHH
T ss_pred eecCCCcCCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcC-------eEEEECCchHHHHH
Confidence 5666655555555443332222 2112223444456678888999999999999754 58999999999988
Q ss_pred HHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCC
Q 037144 156 TLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI---VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAEL 232 (502)
Q Consensus 156 al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~---~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~ 232 (502)
++.+......+ +++.|+++...|+++..++.. .|+ +++.+|+++ ++.+|+++|+++++++
T Consensus 76 ~~~~~~~~~~~-------~gd~vi~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~----- 138 (382)
T 4hvk_A 76 AIIGYAMRNAR-------KGKHILVSAVEHMSVINPAKFLQKQGF---EVEYIPVGK--YGEVDVSFIDQKLRDD----- 138 (382)
T ss_dssp HHHHHHHHHGG-------GCCEEEEETTCCHHHHHHHHHHHHTTC---EEEEECBCT--TSCBCHHHHHHHCCTT-----
T ss_pred HHHHhhhhhcC-------CCCEEEECCCCcHHHHHHHHHHHhcCC---EEEEeccCC--CCCcCHHHHHHHhccC-----
Confidence 88876531111 677899999999998887665 488 999999985 5699999999998653
Q ss_pred ccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEE
Q 037144 233 IPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCL 312 (502)
Q Consensus 233 ~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~ 312 (502)
+.+|+++.++|++|.+.|+++|.++|++||+ +|+|++|+.+....+. ... ++|+++.++||++ +|.|+|++
T Consensus 139 -~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~-~~~-----~~d~~~~s~~K~~-g~~g~g~~ 209 (382)
T 4hvk_A 139 -TILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDV-EKI-----GADMLTISSNDIY-GPKGVGAL 209 (382)
T ss_dssp -EEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCH-HHH-----TCSEEEEESGGGT-SCTTCEEE
T ss_pred -ceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCc-hhc-----CCCEEEEeHHHhc-CCCceEEE
Confidence 3489999999999999999999999999999 9999999776554332 111 6899999999975 57789999
Q ss_pred EeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC-C-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q 037144 313 WVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR-R-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFE 390 (502)
Q Consensus 313 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr-~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~ 390 (502)
++++...+. .++...... .....+. . .....+..+++. ..++++++.++..++++++.
T Consensus 210 ~~~~~~~~~-------~~~~~~~~~------------~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~~~~~~~~~~~l~ 269 (382)
T 4hvk_A 210 WIRKEAKLQ-------PVILGGGQE------------NGLRSGSENVPSIVGFGKAAEI-TAMEWREEAERLRRLRDRII 269 (382)
T ss_dssp EEETTCCCC-------CSSCSSCTG------------GGTSCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCccCcC-------cccccCCCc------------CccccCCcCHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHH
Confidence 987653211 111111000 0000110 1 111233344442 35688999999999999999
Q ss_pred HHHhcCCCeEEecCCC---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee
Q 037144 391 RLVTSDKRFEVAFPRN---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI 467 (502)
Q Consensus 391 ~~l~~~~~~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~ 467 (502)
+.|+++|++++..++. .++++|.+.... ..++.+.|.++|..+..+..
T Consensus 270 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~gi~v~~g~~ 320 (382)
T 4hvk_A 270 DNVLKIEESYLNGHPEKRLPNNVNVRFSYIE-----------------------------GESIVLSLDMAGIQASTGSA 320 (382)
T ss_dssp HHHTTSTTEEECSCSSSBCTTEEEEEETTCC-----------------------------HHHHHHHHHHTTCBCBCC--
T ss_pred HHHhcCCCeEEeCCccccCCCEEEEEECCCC-----------------------------HHHHHHHHHHCCEEEeeCCc
Confidence 9999999999875432 347777764321 23566777777864332211
Q ss_pred EC-------------C------EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 468 VG-------------G------IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 468 ~~-------------g------~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+. + ..++|++++ ..+++++++++++.|+++.++
T Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~-~~~t~e~i~~~~~~l~~~~~~ 372 (382)
T 4hvk_A 321 CSSKTLQPSHVLMACGLKHEEAHGTLLLTLG-RYNTDEDVDRLLEVLPGVIER 372 (382)
T ss_dssp ------CCCHHHHHTTCCHHHHHTEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCcchHHHHHcCCChhhcCCeEEEEcC-CCCCHHHHHHHHHHHHHHHHH
Confidence 11 0 468999986 456777999999999988654
No 20
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.96 E-value=7.8e-28 Score=244.35 Aligned_cols=353 Identities=11% Similarity=0.063 Sum_probs=237.7
Q ss_pred CCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHH
Q 037144 76 SPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLC 155 (502)
Q Consensus 76 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~ 155 (502)
.|+++.+.+++..++..+.+.+...... . ..+....+..++++++++++|.+... .+++|+||++|+..
T Consensus 21 ~~~~~~~~p~p~~~~~~v~~a~~~~~~~---~--~~~~~~~~~~~l~~~la~~~~~~~~~------~v~~~~gg~~al~~ 89 (393)
T 3kgw_A 21 VPTRLLLGPGPSNLAPRVLAAGSLRMIG---H--MQKEMLQIMEEIKQGIQYVFQTRNPL------TLVVSGSGHCAMET 89 (393)
T ss_dssp CCCCEECSSSCCCCCHHHHHHTTCCCCC---T--TSHHHHHHHHHHHHHHHHHHTCCCSE------EEEESCCTTTHHHH
T ss_pred CccceeccCCCCCCCHHHHHHhcccccC---c--ccHHHHHHHHHHHHHHHHHhCCCCCc------EEEEeCCcHHHHHH
Confidence 4667777777666666665555442211 1 23555677888999999999987542 47899999999988
Q ss_pred HHHHHHHHHHHHhCccCCCCeEEEeCCCCch--hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 037144 156 TLTAARDRVLKKIGRENISKLVVYSSDQTHC--AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELI 233 (502)
Q Consensus 156 al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~--s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~ 233 (502)
++.+... +++.|+++..+|+ .+...++..|. +++.+|++. ++.+|+++|+++|++..
T Consensus 90 ~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~i~~~~----- 148 (393)
T 3kgw_A 90 ALFNLLE-----------PGDSFLTGTNGIWGMRAAEIADRIGA---RVHQMIKKP--GEHYTLQEVEEGLAQHK----- 148 (393)
T ss_dssp HHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHHC-----
T ss_pred HHHhcCC-----------CCCEEEEEeCCchhHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHHHHHhhCC-----
Confidence 8776633 5677888777876 44778888999 999999975 45899999999998721
Q ss_pred cEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEE
Q 037144 234 PLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLW 313 (502)
Q Consensus 234 p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~ 313 (502)
+.+|+++.++|++|.+.|+++|.++|++||+|+++|++|+.+....+. .. .++|++++++||++++|.++|+++
T Consensus 149 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~-~~-----~~~d~~~~s~sK~~~~~~g~g~~~ 222 (393)
T 3kgw_A 149 PVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYM-DQ-----QGIDIMYSSSQKVLNAPPGISLIS 222 (393)
T ss_dssp CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCT-TT-----TTCCEEEEESSSTTCCCSSCEEEE
T ss_pred CcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccch-hh-----cCCCEEEecCcccccCCCceeEEE
Confidence 337899999999999999999999999999999999999754333221 11 168999999999998888999998
Q ss_pred eeCchhhhhhhcCCc---cc-ccCccCCCCCcccccCCCc-cccc-CCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHH
Q 037144 314 VKDPSCLLSTLSTNP---QY-LKNEATDQEPKEQEVGYKD-WQIT-LCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMA 386 (502)
Q Consensus 314 ~r~~~~l~~~~~~~~---~y-l~~~~~~~~~~~~~~~~~~-~~~~-~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la 386 (502)
+++.. ......... .+ +..... ...+.... .... .+.. ....++..++..+..++++++.++..+++
T Consensus 223 ~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 296 (393)
T 3kgw_A 223 FNDKA-KYKVYSRKTKPVSFYTDITYL-----AKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREAT 296 (393)
T ss_dssp ECHHH-HHHHHTCSSCCSCSTTCHHHH-----HHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ECHHH-HHHHhccCCCCCceeecHHHH-----HHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 86542 222111110 11 100000 00000000 0000 0111 12234455666666677899999999999
Q ss_pred HHHHHHHhcCCCeEEecCC---C-eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcE
Q 037144 387 KLFERLVTSDKRFEVAFPR---N-FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKV 461 (502)
Q Consensus 387 ~~l~~~l~~~~~~~l~~~~---~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 461 (502)
+++.+.|+++ ++++..++ . ..+++|.++.. . ...++.++|.++ |..
T Consensus 297 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~---------------------------~~~~~~~~l~~~~gi~ 347 (393)
T 3kgw_A 297 AHLHKHLQEM-GLKFFVKDPEIRLPTITTVTVPAG-Y---------------------------NWRDIVSYVLDHFSIE 347 (393)
T ss_dssp HHHHHHHHHT-TCCBSSSSGGGBCSSEEEEECCTT-B---------------------------CHHHHHHHHHHHHCEE
T ss_pred HHHHHHHHHc-CCeeccCChhhcCCeEEEEeCCCC-C---------------------------CHHHHHHHHHHhCCEE
Confidence 9999999998 88876322 1 23455665321 1 024567777776 764
Q ss_pred EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 462 FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 462 ~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+..+....+..++|++++...++++++++++++|+++.++
T Consensus 348 v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~ 387 (393)
T 3kgw_A 348 ISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQH 387 (393)
T ss_dssp CBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred EeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHh
Confidence 4333222345689999855666888999999999998765
No 21
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.96 E-value=1.2e-27 Score=242.54 Aligned_cols=349 Identities=11% Similarity=0.035 Sum_probs=237.3
Q ss_pred CcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHH
Q 037144 77 PNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCT 156 (502)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~a 156 (502)
..|+.+...+..++. +.+.+...+.. .| ++...++.+++.+++++++|.+.. ..+++|+|||+|+..+
T Consensus 20 ~~~l~~~~~~~~~~~-v~~a~~~~~~~---~~--~~~~~~~~~~~~~~la~~~g~~~~------~~v~~~~g~t~a~~~~ 87 (386)
T 2dr1_A 20 KYKLFTAGPVACFPE-VLEIMKVQMFS---HR--SKEYRKVHMDTVERLREFLEVEKG------EVLLVPSSGTGIMEAS 87 (386)
T ss_dssp CSEECCSSSCCCCHH-HHHHTTSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCSSS------EEEEESSCHHHHHHHH
T ss_pred cceeecCCCcCCcHH-HHHHHhccccc---cc--CHHHHHHHHHHHHHHHHHhCCCCC------cEEEEeCChHHHHHHH
Confidence 356666544444444 44554444321 22 344578889999999999999721 1488999999999888
Q ss_pred HHHHHHHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 037144 157 LTAARDRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIP 234 (502)
Q Consensus 157 l~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p 234 (502)
+.+... +++.|+++..+|++ +..+++..|+ +++.+|++. ++.+|+++|+++|++.. .+
T Consensus 88 ~~~l~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~~----~~ 147 (386)
T 2dr1_A 88 IRNGVS-----------KGGKVLVTIIGAFGKRYKEVVESNGR---KAVVLEYEP--GKAVKPEDLDDALRKNP----DV 147 (386)
T ss_dssp HHHHSC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHCT----TC
T ss_pred HHHhhc-----------CCCeEEEEcCCchhHHHHHHHHHhCC---ceEEEecCC--CCCCCHHHHHHHHhcCC----CC
Confidence 876532 56788889899998 8888899999 999999975 46899999999996521 24
Q ss_pred EEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEe
Q 037144 235 LFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWV 314 (502)
Q Consensus 235 ~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~ 314 (502)
.+|+++.++|++|.+.|+++|.++|++||+++|+|++|+.+....+ . ... ++|+++.++||+++.|.++|++++
T Consensus 148 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-~----~~~-~~di~~~s~sK~~~~~~g~G~~~~ 221 (386)
T 2dr1_A 148 EAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIK-F----DKW-GLDVVFSSSQKAFGVPPGLAIGAF 221 (386)
T ss_dssp CEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCC-T----TTT-TCSEEEEETTSTTCCCSSCEEEEE
T ss_pred cEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCcccc-c----ccc-CCcEEEEeccccccCCCceEEEEE
Confidence 5788889999999999999999999999999999999987654322 1 111 689999999999999888999988
Q ss_pred eCchhhhhhhcC--CcccccCccCCCCCcccccCCC-cccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHH
Q 037144 315 KDPSCLLSTLST--NPQYLKNEATDQEPKEQEVGYK-DWQITLCRR-FRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLF 389 (502)
Q Consensus 315 r~~~~l~~~~~~--~~~yl~~~~~~~~~~~~~~~~~-~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l 389 (502)
++. ... .+.. ...+...... ...... ......+.. .....+..+++.+... +++++.++..++++++
T Consensus 222 ~~~-~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l 293 (386)
T 2dr1_A 222 SER-FLE-IAEKMPERGWYFDIPL------YVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMV 293 (386)
T ss_dssp CHH-HHH-HHTTCTTCCSTTCHHH------HHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CHH-HHH-HHhcCCCCceEEeHHH------HHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 653 222 2211 0111100000 000000 000001111 1223455566665455 6888999999999999
Q ss_pred HHHHhcCCCeEEecCC---CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee
Q 037144 390 ERLVTSDKRFEVAFPR---NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA 466 (502)
Q Consensus 390 ~~~l~~~~~~~l~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 466 (502)
.+.|+++ ++++..++ ..++++|.++.. . ...++.++|.++|..+..+.
T Consensus 294 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~---------------------------~~~~~~~~l~~~gi~v~~~~ 344 (386)
T 2dr1_A 294 REGVREI-GLDILAEPGHESPTITAVLTPPG-I---------------------------KGDEVYEAMRKRGFELAKGY 344 (386)
T ss_dssp HHHHHHT-TCCBSSCTTCBCSSEEEEECCTT-C---------------------------CHHHHHHHHHHTTEECEECC
T ss_pred HHHHHHc-CCeeCcCccccCCceEEEEcCCC-C---------------------------CHHHHHHHHHHCCeEEecCc
Confidence 9999998 88876442 356777776421 0 03467777877876543332
Q ss_pred eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 467 IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 467 ~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
...+..++|++++. .+++++++++++.|+++.++
T Consensus 345 ~~~~~~~iRi~~~~-~~~~~~i~~~~~~l~~~~~~ 378 (386)
T 2dr1_A 345 GSVKEKTFRIGHMG-YMKFEDIQEMLDNLREVINE 378 (386)
T ss_dssp GGGTTTEEEEECCS-SCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCC-CCCHHHHHHHHHHHHHHHHH
Confidence 22234689999864 46777999999999987654
No 22
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.96 E-value=1.1e-27 Score=243.71 Aligned_cols=353 Identities=15% Similarity=0.071 Sum_probs=231.9
Q ss_pred CcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHH
Q 037144 77 PNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCT 156 (502)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~a 156 (502)
++.+.+.+++..++..+.+.+...+.. .| ++.......++++++++++|.+... .+++|+|||+|+..+
T Consensus 18 ~~~~~~~~g~~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~l~~~la~~~g~~~~~------~i~~~~g~t~a~~~~ 86 (393)
T 2huf_A 18 PNKLLMGPGPSNAPQRVLDAMSRPILG---HL--HPETLKIMDDIKEGVRYLFQTNNIA------TFCLSASGHGGMEAT 86 (393)
T ss_dssp CCCEECSSSCCCCCHHHHHHTTSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCCCSE------EEEESSCHHHHHHHH
T ss_pred CCeEEecCCCCCCCHHHHHHHHhhhcc---CC--CHHHHHHHHHHHHHHHHHhCCCCCc------EEEEcCcHHHHHHHH
Confidence 444455555544555555665554432 22 3445677788999999999986531 478999999999888
Q ss_pred HHHHHHHHHHHhCccCCCCeEEEeCCCCchhH--HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 037144 157 LTAARDRVLKKIGRENISKLVVYSSDQTHCAF--QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIP 234 (502)
Q Consensus 157 l~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p 234 (502)
+.+... +++.|+++..+|++. .+.++..|+ +++.+|+++ ++.+|+++|+++|++. .+
T Consensus 87 ~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~ 145 (393)
T 2huf_A 87 LCNLLE-----------DGDVILIGHTGHWGDRSADMATRYGA---DVRVVKSKV--GQSLSLDEIRDALLIH-----KP 145 (393)
T ss_dssp HHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHH-----CC
T ss_pred HHHHhC-----------CCCEEEEECCCcchHHHHHHHHHcCC---eeEEEeCCC--CCCCCHHHHHHHHhcc-----CC
Confidence 876632 567888888889873 445566898 999999975 4689999999999762 12
Q ss_pred EEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEe
Q 037144 235 LFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWV 314 (502)
Q Consensus 235 ~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~ 314 (502)
.+|+++.++|++|.+.|+++|+++|++||+++|+|++++.+....+ . .. .++|+++.++||++++|.|+|++++
T Consensus 146 ~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~----~~-~~~d~~~~s~sK~l~g~~G~G~~~~ 219 (393)
T 2huf_A 146 SVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMF-M----DR-WEIDAMYTGSQKVLGAPPGITPVSF 219 (393)
T ss_dssp SEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-T----TT-TTCSEEECCSSSTTCCCSSCEEEEE
T ss_pred cEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcc-h----hh-cCccEEEECCCcccccCCCeEEEEE
Confidence 3788899999999999999999999999999999999875443222 1 11 1589999999999988888999888
Q ss_pred eCchhhhhhhcC---CcccccCccCCCCCcccccCC-Cccccc-CCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 037144 315 KDPSCLLSTLST---NPQYLKNEATDQEPKEQEVGY-KDWQIT-LCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKL 388 (502)
Q Consensus 315 r~~~~l~~~~~~---~~~yl~~~~~~~~~~~~~~~~-~~~~~~-~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~ 388 (502)
++ ......... ..+|....... ...+.. ...... ++... ...++..+++.+..+++.++.++..+++++
T Consensus 220 ~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 294 (393)
T 2huf_A 220 SH-RAVERYKRRNTKVKVYYWDMSLV----GDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKR 294 (393)
T ss_dssp CH-HHHHHHHTCSSCCSCGGGCHHHH----HHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CH-HHHHHHhhcCCCCceEEEchHHH----HhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 63 332222111 12222110000 000000 000000 11111 112333455555455788899999999999
Q ss_pred HHHHHhcCCCeEEecCC--Cee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEE
Q 037144 389 FERLVTSDKRFEVAFPR--NFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMT 464 (502)
Q Consensus 389 l~~~l~~~~~~~l~~~~--~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~ 464 (502)
+.+.|+++ ++++..++ ..+ +++|.++.. . + ..++.++|.++ |..+..
T Consensus 295 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~-------------------------~--~~~~~~~L~~~~gi~v~~ 345 (393)
T 2huf_A 295 LYRGLQDA-GFELYADPKDRLSTVTTIKVPQG-V-------------------------D--WLKAAQYAMKTYLVEISG 345 (393)
T ss_dssp HHHHHHHT-TCCBSSCGGGBCTTEEEEECCTT-C-------------------------C--HHHHHHHHHHHHCEECBC
T ss_pred HHHHHHHc-CCeeccCccccCCcEEEEEcCCC-C-------------------------C--HHHHHHHHHHhCCEEEec
Confidence 99999998 88876443 233 667766421 1 0 23566666654 754322
Q ss_pred eeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 465 HAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 465 ~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+....+..++|++++.+.++++++++++++|+++.++
T Consensus 346 g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~ 382 (393)
T 2huf_A 346 GLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAA 382 (393)
T ss_dssp CCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred CcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHH
Confidence 2222245689999865667888999999999988654
No 23
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.96 E-value=1.1e-27 Score=242.52 Aligned_cols=340 Identities=12% Similarity=0.081 Sum_probs=230.1
Q ss_pred ccccCCCCCCHHHHHHHHHHhhcCC--C-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHH
Q 037144 79 YFAYFPATSSVAGIVGEMLSSGFNV--V-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLC 155 (502)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~n~--~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~ 155 (502)
|+++..+++.++.++..+.....+. + ...|..++.......++.+++++++|.+.+ .+++|+|||+|+..
T Consensus 3 yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a~~~ 75 (382)
T 4eb5_A 3 YFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG-------TVVFTSGATEANNL 75 (382)
T ss_dssp BCBTTTCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTE-------EEEEESSHHHHHHH
T ss_pred eeccCCCCCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEcCchHHHHHH
Confidence 5666555555555444333222211 1 112444455677888899999999998653 58999999999998
Q ss_pred HHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCC
Q 037144 156 TLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI---VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAEL 232 (502)
Q Consensus 156 al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~---~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~ 232 (502)
++.+.+..+.. +++.|+++..+|+++..++.. .|+ +++.+|+++ ++.+|+++|+++|+++
T Consensus 76 ~~~~l~~~~~~-------~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~----- 138 (382)
T 4eb5_A 76 AIIGYAMRNAR-------KGKHILVSAVEHMSVINPAKFLQKQGF---EVEYIPVGK--YGEVDVSFIDQKLRDD----- 138 (382)
T ss_dssp HHHHHHHHHGG-------GCCEEEEETTCCHHHHHHHHHHTTTTC---EEEEECBCT--TSCBCHHHHHHHCCTT-----
T ss_pred HHHHHHhhccC-------CCCEEEECCCcchHHHHHHHHHHhCCc---EEEEeccCC--CCccCHHHHHHHhcCC-----
Confidence 88877632111 567889999999999887765 577 899999975 4689999999988643
Q ss_pred ccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEE
Q 037144 233 IPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCL 312 (502)
Q Consensus 233 ~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~ 312 (502)
+.+|++++++|++|.+.|+++|.++|++||+| |+|++|+.+....+ .... ++|+++.++||++ +|.|+|++
T Consensus 139 -~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~-~~~~-----~~di~~~s~sK~~-g~~g~G~~ 209 (382)
T 4eb5_A 139 -TILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVD-VEKI-----GADMLTISSNDIY-GPKGVGAL 209 (382)
T ss_dssp -EEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCC-HHHH-----TCSEEEEETGGGT-CCSSCEEE
T ss_pred -CeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccC-cccc-----CCCEEEeehHHhc-CCCceEEE
Confidence 45888999999999999999999999999999 99999985433222 1111 5899999999985 56689999
Q ss_pred EeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc-CCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q 037144 313 WVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT-LCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFE 390 (502)
Q Consensus 313 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~-~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~ 390 (502)
++++...+. .++...... .... ++.. .....+..+++.+ .++++++.++..++++++.
T Consensus 210 ~~~~~~~l~-------~~~~~~~~~------------~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~ 269 (382)
T 4eb5_A 210 WIRKEAKLQ-------PVILGGGQE------------NGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRII 269 (382)
T ss_dssp EEETTCCCC-------CSSCSSCTG------------GGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred EEccccccC-------ceecCCCcc------------ccccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHH
Confidence 887652111 111110000 0000 0101 1122334455543 4578889999999999999
Q ss_pred HHHhcCCCeEEecCCC---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee
Q 037144 391 RLVTSDKRFEVAFPRN---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI 467 (502)
Q Consensus 391 ~~l~~~~~~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~ 467 (502)
+.|+++|++++..++. .++++|++.+.. ..++.+.|.+.|..+..+..
T Consensus 270 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~gi~v~~g~~ 320 (382)
T 4eb5_A 270 DNVLKIEESYLNGHPEKRLPNNVNVRFSYIE-----------------------------GESIVLSLDMAGIQASTGSA 320 (382)
T ss_dssp HHHTTSTTEEECSCSSSBCTTEEEEEETTSC-----------------------------HHHHHHHHHHHTCBCBCCCG
T ss_pred HHHhhCCCeEEeCCcccCCCCEEEEEeCCcC-----------------------------HHHHHHHHHHCCEEEecccc
Confidence 9999998999875431 457777764211 23456666666864432211
Q ss_pred E-------------------CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 468 V-------------------GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 468 ~-------------------~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
. .+..++|+++. ..+++++++++++.|+++.++
T Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~ 372 (382)
T 4eb5_A 321 CSSKTLQPSHVLMACGLKHEEAHGTLLLTLG-RYNTDEDVDRLLEVLPGVIER 372 (382)
T ss_dssp GGTSSCCCCHHHHHTTCCHHHHTTEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcccHHHHHcCCChhccCCeEEEECC-CCCCHHHHHHHHHHHHHHHHH
Confidence 0 01358999975 456778999999999987654
No 24
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.96 E-value=3.1e-27 Score=240.25 Aligned_cols=349 Identities=14% Similarity=0.059 Sum_probs=235.2
Q ss_pred CCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHH
Q 037144 76 SPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLC 155 (502)
Q Consensus 76 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~ 155 (502)
++.|+++...++.++. +.+.+...+.. ..++.......++++++++++|.+.+ .+++|+|||+|+..
T Consensus 8 ~~~yl~~~~~~~~~~~-v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~t~g~t~a~~~ 74 (392)
T 2z9v_A 8 DPVITLTAGPVNAYPE-VLRGLGRTVLY-----DYDPAFQLLYEKVVDKAQKAMRLSNK-------PVILHGEPVLGLEA 74 (392)
T ss_dssp CCSEECSSSCCCCCHH-HHHHTTSCCCC-----TTSHHHHHHHHHHHHHHHHHTTCSSC-------CEEESSCTHHHHHH
T ss_pred CcceeecCCCcCCCHH-HHHHHhccccc-----cccHHHHHHHHHHHHHHHHHhCCCCC-------EEEEeCCchHHHHH
Confidence 4567777654444444 44555444432 12355566777899999999998643 58999999999988
Q ss_pred HHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH--HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 037144 156 TLTAARDRVLKKIGRENISKLVVYSSDQTHCAF--QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELI 233 (502)
Q Consensus 156 al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~ 233 (502)
++.+... +++.|+++..+|++. ...++..|+ +++.+|+++ ++.+|+++|+++|++.. .
T Consensus 75 ~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~~----~ 134 (392)
T 2z9v_A 75 AAASLIS-----------PDDVVLNLASGVYGKGFGYWAKRYSP---HLLEIEVPY--NEAIDPQAVADMLKAHP----E 134 (392)
T ss_dssp HHHHHCC-----------TTCCEEEEESSHHHHHHHHHHHHHCS---CEEEEECCT--TSCCCHHHHHHHHHHCT----T
T ss_pred HHHHhcC-----------CCCEEEEecCCcccHHHHHHHHHcCC---ceEEeeCCC--CCCCCHHHHHHHHhcCC----C
Confidence 8876632 567788888899875 345566899 999999975 35899999999996521 2
Q ss_pred cEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEE
Q 037144 234 PLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLW 313 (502)
Q Consensus 234 p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~ 313 (502)
+.+|+++.++|++|.+.|+++|.++|++||+|+|+|++|+.+....+ .... ++|+++.++|||+++|.|+|+++
T Consensus 135 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~~-----~~d~~~~s~sK~~~~~~g~G~l~ 208 (392)
T 2z9v_A 135 ITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTH-PEDC-----KADIYVTGPNKCLGAPPGLTMMG 208 (392)
T ss_dssp CCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCC-GGGG-----TCSEEEECSSSTTCCCSCCEEEE
T ss_pred CcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccc-cccc-----cceEEEecCcccccCCCceeEEE
Confidence 44788899999999999999999999999999999999986544332 1111 58999999999999888899998
Q ss_pred eeCchhhhhhhcC-C--c--ccccCccCCCCCcccccCCCcccc-cCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHH
Q 037144 314 VKDPSCLLSTLST-N--P--QYLKNEATDQEPKEQEVGYKDWQI-TLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMA 386 (502)
Q Consensus 314 ~r~~~~l~~~~~~-~--~--~yl~~~~~~~~~~~~~~~~~~~~~-~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la 386 (502)
+++. ... .+.. . + .|+...... . .+..... .++... ....+..+++.+...|++++.++..+++
T Consensus 209 ~~~~-~~~-~l~~~~~g~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~ 279 (392)
T 2z9v_A 209 VSER-AWA-KMKANPLAPRASMLSIVDWE-----N--AWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTA 279 (392)
T ss_dssp ECHH-HHH-HHHTCTTSCCSSTTCSGGGT-----T--TTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ECHH-HHH-HhhhccCCCCceeccHHHHH-----h--hhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 8654 222 2211 0 1 111100000 0 0000000 011111 1134455666655566888999999999
Q ss_pred HHHHHHHhcCCCeEEecCC----CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcE
Q 037144 387 KLFERLVTSDKRFEVAFPR----NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKV 461 (502)
Q Consensus 387 ~~l~~~l~~~~~~~l~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 461 (502)
+++.+.|+++ ++++..++ ..++++|+++.. . + ..++.++|.++ |..
T Consensus 280 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~-------------------------~--~~~l~~~L~~~~gi~ 330 (392)
T 2z9v_A 280 KAMRAGVTAM-GLSVWAASDSIASPTTTAVRTPDG-V-------------------------D--EKALRQAARARYGVV 330 (392)
T ss_dssp HHHHHHHHHT-TCCBSSSSGGGBCTTEEEEECCTT-C-------------------------C--HHHHHHHHHHHHCEE
T ss_pred HHHHHHHHHc-CCeeccCCccccCCceEEEECCCC-C-------------------------C--HHHHHHHHHhcCCEE
Confidence 9999999988 88876523 355677776421 0 0 23567777776 865
Q ss_pred EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 462 FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 462 ~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+..+....+..++|+++..+.+++++++++++.|+++.++
T Consensus 331 v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~ 370 (392)
T 2z9v_A 331 FSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNA 370 (392)
T ss_dssp CEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHH
Confidence 4433222345689999644356788999999999988764
No 25
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.96 E-value=8.6e-28 Score=240.26 Aligned_cols=342 Identities=12% Similarity=0.057 Sum_probs=228.4
Q ss_pred cCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHH
Q 037144 82 YFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR 161 (502)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~ 161 (502)
+.+++..++..+.+.+...+.. ..++.......++++++++++|.+... ..+++|+|||+|+..++.+.+
T Consensus 4 ~~~gp~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~~-----~~v~~t~g~t~a~~~~~~~~~ 73 (353)
T 2yrr_A 4 LTPGPTPIPERVQKALLRPMRG-----HLDPEVLRVNRAIQERLAALFDPGEGA-----LVAALAGSGSLGMEAGLANLD 73 (353)
T ss_dssp CSSSSCCCCHHHHGGGGSCCCC-----TTCHHHHHHHHHHHHHHHHHHCCCTTC-----EEEEESSCHHHHHHHHHHTCS
T ss_pred CCCCCCCCCHHHHHHHhccccc-----ccCHHHHHHHHHHHHHHHHHhCCCCCC-----ceEEEcCCcHHHHHHHHHHhc
Confidence 3344444444455555554432 134666778889999999999986211 158999999999987776542
Q ss_pred HHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEE
Q 037144 162 DRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCA 239 (502)
Q Consensus 162 ~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~ 239 (502)
+ +.|+++...|++ +.+.++..|+ +++.+|+++ ++.+|+++|++++++. ++.+|++
T Consensus 74 ------------~-d~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~ 130 (353)
T 2yrr_A 74 ------------R-GPVLVLVNGAFSQRVAEMAALHGL---DPEVLDFPP--GEPVDPEAVARALKRR-----RYRMVAL 130 (353)
T ss_dssp ------------C-CCEEEEECSHHHHHHHHHHHHTTC---CEEEEECCT--TSCCCHHHHHHHHHHS-----CCSEEEE
T ss_pred ------------C-CcEEEEcCCCchHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHHHHHHhC-----CCCEEEE
Confidence 2 456777778887 4567788899 999999975 4689999999999762 1347888
Q ss_pred ecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchh
Q 037144 240 TVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSC 319 (502)
Q Consensus 240 t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~ 319 (502)
+.++|++|.+.|+++|.++|++||+|+|+|++|+.+....+ .... ++|++++++|||+++|.|+|++++++..
T Consensus 131 ~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~-~~~~-----~~d~~~~s~~K~~~~~~g~G~~~~~~~~- 203 (353)
T 2yrr_A 131 VHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFS-MRAM-----GVDYAFTGSQKCLSAPPGLAPIAASLEA- 203 (353)
T ss_dssp ESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCC-HHHH-----TCSEEECCTTSTTCCCSSCEEEEECHHH-
T ss_pred EccCCCcceecCHHHHHHHHHHcCCeEEEEcCccccccccc-cccc-----CceEEEecCcccccCCCceEEEEECHHH-
Confidence 99999999999999999999999999999999965433222 1111 5799999999999888889999886542
Q ss_pred hhhhhcCCc-ccccCccCCCCCcccccCCCcccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144 320 LLSTLSTNP-QYLKNEATDQEPKEQEVGYKDWQITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK 397 (502)
Q Consensus 320 l~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 397 (502)
+ +.+...+ .|+..... .+... .....++... ....+..+++.+...+++++.++..++++++.+.|+++
T Consensus 204 ~-~~l~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 274 (353)
T 2yrr_A 204 R-KAFTGKRGWYLDLARV-----AEHWE--RGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR- 274 (353)
T ss_dssp H-HHCCCCSCSTTCHHHH-----HHHHT--TCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred H-HHhccCCCccccHHHH-----hhhhh--cCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-
Confidence 2 2222111 11110000 00000 0000111111 12344566666666678899999999999999999998
Q ss_pred CeEEecCC--CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEE
Q 037144 398 RFEVAFPR--NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLR 475 (502)
Q Consensus 398 ~~~l~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR 475 (502)
++++..++ ...+++|+++.. . + ..++.+.|.++|..+..+.......++|
T Consensus 275 g~~~~~~~~~~~~~~~~~~~~~-~-------------------------~--~~~~~~~l~~~gi~v~~g~~~~~~~~iR 326 (353)
T 2yrr_A 275 GFRPYPKASPLPTVLVVRPPEG-V-------------------------D--ADRLVRALYAEGVAVAGGIGPTRGQVLR 326 (353)
T ss_dssp TCEESCSSSBCTTEEEEECCTT-C-------------------------C--HHHHHHHHHHTTEECEECCGGGTTTCEE
T ss_pred CCccccCccCCCeEEEEECCCC-C-------------------------C--HHHHHHHHHHCCEEEeCCccccCCCeEE
Confidence 89887543 234556776321 1 0 2456777777786544333223346899
Q ss_pred EEecCCCCcHHHHH-HHHHHHHHHHHh
Q 037144 476 FAAGNSMTMESHVR-AAWTVVQEHLEA 501 (502)
Q Consensus 476 ~~~~~~~t~~~di~-~~~~~l~~~~~~ 501 (502)
++++...+.+ +++ +++++|+++.+.
T Consensus 327 i~~~~~~~~~-~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 327 LGLMGEGARR-EAYQAFLKALDRALAL 352 (353)
T ss_dssp EECSGGGSCH-HHHHHHHHHHHHHHHC
T ss_pred EecCccCCHH-HHHHHHHHHHHHHHhh
Confidence 9986555555 888 999999988653
No 26
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.96 E-value=1.7e-27 Score=238.21 Aligned_cols=393 Identities=12% Similarity=0.069 Sum_probs=245.4
Q ss_pred hHhhcCC-CCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCcccccCCCC----CCHHHHHHHHH---HhhcCCCCcccccC
Q 037144 40 YLKKRLP-ESAPYSPESVETILQDVQEHIVPGITHWQSPNYFAYFPAT----SSVAGIVGEML---SSGFNVVGLDWISS 111 (502)
Q Consensus 40 ~l~~~~~-~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~----~~~~~~~~~~l---~~~~n~~~~~~~~~ 111 (502)
.++..+. ..+|++|-+.+.|--.|.++-.-...+ |.+..--+ -....+++.-. .-.+...+..-..-
T Consensus 31 ~~~~ll~~r~~P~~g~~d~~ie~~l~~la~mdsnn-----~~~~~g~GERE~Rv~s~lv~rrh~~~~HGiGRSGd~~~~Q 105 (501)
T 3hl2_A 31 LIRLLLEKGKCPENGWDESTLELFLHELAIMDSNN-----FLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQ 105 (501)
T ss_dssp HHHHHHHHCCCCSSCCCHHHHHHHHHHHHTTBGGG-----CSSCCCCSSCCCCCSCHHHHHHTTTCCSCBSCSSCTTCCC
T ss_pred HHHHHHHcCCCCccCCCHHHHHHHHHHHHhhccCC-----CcccCCcccchHHHHHHHHHhhccCcccCCCCccccccCC
Confidence 3455554 489999999887766666553333222 33332111 11112222111 11122222222222
Q ss_pred h-------hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC
Q 037144 112 P-------AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT 184 (502)
Q Consensus 112 p-------~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 184 (502)
| ...--|..+.+||+.+ |+|... ..++++|+|.+++..+.++..... .+++.|+++..+
T Consensus 106 PKAaGssll~~ltn~l~ld~L~~~-G~~~~~------~~flVnGsTgg~lamilaa~r~~r-------pg~d~VIvpRn~ 171 (501)
T 3hl2_A 106 PKAAGSSLLNKITNSLVLDIIKLA-GVHTVA------NCFVVPMATGMSLTLCFLTLRHKR-------PKAKYIIWPRID 171 (501)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHT-TCTTCC------EEEEESSCHHHHHHHHHHHHHHHC-------TTCCEEEEECCC
T ss_pred CCccchHHHHHHHHHHHHHHHHHc-CCCCCC------cEEEECcHHHHHHHHHHHHcCccc-------CCCCEEEEecch
Confidence 2 2234566788999888 999753 578899999777666666544310 023678889999
Q ss_pred chhHHHHHHHcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC
Q 037144 185 HCAFQKAAQIVGIDRKNIRAIKTTK-SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG 263 (502)
Q Consensus 185 H~s~~~aa~~~Glg~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g 263 (502)
|.|+.+++.++|+ .+++|+... ++.+.+|+++||++|++... ....+|+.|.+++..+..+||++|+++|++||
T Consensus 172 HKSv~kAliL~Gl---~Pv~V~p~~d~~~~~id~e~le~aI~e~ga--~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~g 246 (501)
T 3hl2_A 172 QKSCFKSMITAGF---EPVVIENVLEGDELRTDLKAVEAKVQELGP--DCILCIHSTTSCFAPRVPDRLEELAVICANYD 246 (501)
T ss_dssp CHHHHHHHHHTTC---EEEEECEEEETTEEEECHHHHHHHHHHHCG--GGEEEEEEECSCCTTBCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCC---eEEEEeeeecccccCCCHHHHHHHHHhcCC--CcEEEEEecCCCCCCcccccHHHHHHHHHHcC
Confidence 9999999999999 999887622 12589999999999987621 12233444333333457799999999999999
Q ss_pred CEEEeecccccccccCccch-hhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144 264 IWVHVDAAYAGSACICPEFR-HFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE 342 (502)
Q Consensus 264 ~~lhVDaA~g~~~~~~~~~~-~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 342 (502)
+|+|||+|||+.+.++++.. ..+. ..+||+++.|+||++.+|.+++++++++++.+... ...|....
T Consensus 247 IpllVDeAhGah~~~~~~lp~sA~~-~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~---~~~yPGr~-------- 314 (501)
T 3hl2_A 247 IPHIVNNAYGVQSSKCMHLIQQGAR-VGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEI---SKMYPGRA-------- 314 (501)
T ss_dssp CCEEEECTTCTTCHHHHHHHHHHHH-HSCCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHH---HHTSCSCB--------
T ss_pred CeEEEeCcchhhhhhhhhhHHHHHh-cCCCcEEEecccccceeecCceEEEeCCHHHHHHH---HHhCCCCC--------
Confidence 99999999999875543321 1111 22599999999999999999999989988765432 12232110
Q ss_pred cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCCeeEEEEEeecCcc
Q 037144 343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK---RFEVAFPRNFSLVCFRVTPSAV 419 (502)
Q Consensus 343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~ 419 (502)
..+.++.+|+++..+|.+||+++++++.+++++|++.|+++. |-+++..+. |-+++.+.-..+
T Consensus 315 -------------S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~-n~is~a~tl~~~ 380 (501)
T 3hl2_A 315 -------------SASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPH-NPISLAMTLKTL 380 (501)
T ss_dssp -------------CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTT-CSSEEEEECTTS
T ss_pred -------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCC-CceeEEEecccc
Confidence 023568899999999999999999999999999999998742 345554332 323333322211
Q ss_pred hhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee--------eEC---------CEEEEEEEecCCC
Q 037144 420 MDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA--------IVG---------GIYVLRFAAGNSM 482 (502)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--------~~~---------g~~~lR~~~~~~~ 482 (502)
. ........++...|..+- -+|-=+++++ .+. ...|+=++ +...
T Consensus 381 ~-----------------~~~~~~~t~~gs~Lf~r~-vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a-~aiG 441 (501)
T 3hl2_A 381 D-----------------EHRDKAVTQLGSMLFTRQ-VSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAA-SAIG 441 (501)
T ss_dssp C-----------------TTTSCHHHHHHHHHHHTT-CCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEE-CCTT
T ss_pred c-----------------ccccccHHHHHHHHHhcC-CCcceeecCCCceEECCeeecCcccCCCCCCchHHHHH-HHcC
Confidence 0 000112233333444331 1222233322 111 12366665 3466
Q ss_pred CcHHHHHHHHHHHHHHHHh
Q 037144 483 TMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 483 t~~~di~~~~~~l~~~~~~ 501 (502)
.+++|||.+++.|.++..+
T Consensus 442 ~~~~~v~~~~~~l~~~~~~ 460 (501)
T 3hl2_A 442 MKMQDVDLFIKRLDRCLKA 460 (501)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 7888999999999988754
No 27
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.96 E-value=2e-27 Score=241.75 Aligned_cols=345 Identities=13% Similarity=0.059 Sum_probs=235.4
Q ss_pred ccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHH
Q 037144 79 YFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLT 158 (502)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~ 158 (502)
|+....+.+.++. +.+.+...+.. .| ++...++..++.+++++++|.+.+. .+++|+|||+|+..++.
T Consensus 36 ~l~~~~~~~~~~~-v~~a~~~~~~~---~~--~~~~~~~~~~~~~~la~~~g~~~~~------~v~~t~g~t~al~~~~~ 103 (393)
T 1vjo_A 36 LLLGPGPSNAHPS-VLQAMNVSPVG---HL--DPAFLALMDEIQSLLRYVWQTENPL------TIAVSGTGTAAMEATIA 103 (393)
T ss_dssp EECSSSCCCCCHH-HHHHHSSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCCCSC------EEEESSCHHHHHHHHHH
T ss_pred eeccCCCCCCCHH-HHHHHhccccc---cc--CHHHHHHHHHHHHHHHHHhCCCCCc------EEEEeCchHHHHHHHHH
Confidence 4444333333344 55555554432 22 3446678889999999999996431 48999999999988887
Q ss_pred HHHHHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEE
Q 037144 159 AARDRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLF 236 (502)
Q Consensus 159 ~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~ 236 (502)
++.. +++.|+++..+|++ +..+++..|+ +++.+|++. ++.+|+++|++++++. .+.+
T Consensus 104 ~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~-----~~~~ 162 (393)
T 1vjo_A 104 NAVE-----------PGDVVLIGVAGYFGNRLVDMAGRYGA---DVRTISKPW--GEVFSLEELRTALETH-----RPAI 162 (393)
T ss_dssp HHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCHHHHHHHHHHH-----CCSE
T ss_pred hccC-----------CCCEEEEEcCChhHHHHHHHHHHcCC---ceEEEecCC--CCCCCHHHHHHHHhhC-----CceE
Confidence 7643 56788888889998 8899999999 999999975 4689999999999862 1237
Q ss_pred EEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeC
Q 037144 237 LCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKD 316 (502)
Q Consensus 237 Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~ 316 (502)
|+++.++|++|.+.|+++|.++|++||+++++|++|+.+....+ +.. .++|+++.++||+++.|.++|++++++
T Consensus 163 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~-----~~~-~~~di~~~s~sK~l~~~~~~G~l~~~~ 236 (393)
T 1vjo_A 163 LALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIF-----LDA-WGVDLAYSCSQKGLGCSPGASPFTMSS 236 (393)
T ss_dssp EEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCC-----TTT-TTCSEEECCSSSTTCSCSSCEEEEECH
T ss_pred EEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCc-----ccc-cCccEEEEcCcccccCCCceEEEEECH
Confidence 88899999999999999999999999999999999984432221 111 268999999999999998899999865
Q ss_pred chhhhhhhcCC----cccccCccCCCCCcccccCCCcccccC-CCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q 037144 317 PSCLLSTLSTN----PQYLKNEATDQEPKEQEVGYKDWQITL-CRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFE 390 (502)
Q Consensus 317 ~~~l~~~~~~~----~~yl~~~~~~~~~~~~~~~~~~~~~~~-sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~ 390 (502)
. ... .+... ..+...... ..+.. ....... +.. .....+..+++.+..++++++.++..++++++.
T Consensus 237 ~-~~~-~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 308 (393)
T 1vjo_A 237 R-AIE-KLQRRRTKVANWYLDMNL----LGKYW--GSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLW 308 (393)
T ss_dssp H-HHH-HHHTCSSCCSCSTTCHHH----HHHHH--STTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred H-HHH-HHhccCCCCCceecCcHh----hhhhh--ccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 4 222 22110 111110000 00000 0000111 111 122345566666555678889999999999999
Q ss_pred HHHhcCCCeEEecCCC---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEee
Q 037144 391 RLVTSDKRFEVAFPRN---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHA 466 (502)
Q Consensus 391 ~~l~~~~~~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~ 466 (502)
+.|+++ ++++..+.. .++++|.++.. . + ..++.++|.++ |..+.++.
T Consensus 309 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~-------------------------~--~~~~~~~l~~~~gi~v~~g~ 359 (393)
T 1vjo_A 309 ERLEDI-GLSLHVEKEYRLPTLTTVCIPDG-V-------------------------D--GKAVARRLLNEHNIEVGGGL 359 (393)
T ss_dssp HHHHHT-TCCBSSCGGGBCSSEEEEECCTT-C-------------------------C--HHHHHHHHHHHHCEECEECC
T ss_pred HHHHHc-CCcccCCccccCCcEEEEEcCCC-C-------------------------C--HHHHHHHHHhhCCEEEecCc
Confidence 999988 888764432 34667766321 0 0 24567777777 86554443
Q ss_pred eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 467 IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 467 ~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
...+..++|+++..+.++++++++++++|+++.
T Consensus 360 ~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 360 GELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp GGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 333456899996556678889999999998875
No 28
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.96 E-value=1.3e-27 Score=241.94 Aligned_cols=318 Identities=13% Similarity=0.091 Sum_probs=222.8
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--H
Q 037144 111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA--F 188 (502)
Q Consensus 111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~ 188 (502)
++....+..++++++++++|.+... ..+++|+|||+|+. ++..... +++.|+++...|++ +
T Consensus 30 ~~~~~~~~~~~~~~la~~~~~~~~~-----~~v~~~~g~t~al~-~~~~~~~-----------~gd~vi~~~~~~~~~~~ 92 (384)
T 3zrp_A 30 SKEFVEALAYSLKGLRYVMGASKNY-----QPLIIPGGGTSAME-SVTSLLK-----------PNDKILVVSNGVFGDRW 92 (384)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCCTTS-----EEEEEESCHHHHHH-HGGGGCC-----------TTCEEEEECSSHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCC-----cEEEEcCCcHHHHH-HHHhhcC-----------CCCEEEEecCCcchHHH
Confidence 4555778888999999999997621 15899999999998 7654422 67788888889976 6
Q ss_pred HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144 189 QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 189 ~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV 268 (502)
...++..|+ +++.+|++. ++.+|+++|+++|++.. +.+|+++.++|++|.+.|+++|.++|++||+++++
T Consensus 93 ~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 162 (384)
T 3zrp_A 93 EQIFKRYPV---NVKVLRPSP--GDYVKPGEVEEEVRKSE-----YKLVALTHVETSTGVREPVKDVINKIRKYVELIVV 162 (384)
T ss_dssp HHHHTTSSC---EEEEECCST--TCCCCHHHHHHHHHHSC-----EEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEE
T ss_pred HHHHHHcCC---cEEEecCCC--CCCCCHHHHHHHHHhCC-----CcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEE
Confidence 667778898 999999986 46899999999998721 45889999999999999999999999999999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhh-hc-CCcccccCccCCCCCcccccC
Q 037144 269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLST-LS-TNPQYLKNEATDQEPKEQEVG 346 (502)
Q Consensus 269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~-~~-~~~~yl~~~~~~~~~~~~~~~ 346 (502)
|++|+.+....+. .. .++|++++++||++++|.++|++++++.. +... -. ....|..... ....
T Consensus 163 D~a~~~~~~~~~~-~~-----~~~d~~~~s~~K~~~~~~g~g~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~ 228 (384)
T 3zrp_A 163 DGVSSVGAEEVKA-EE-----WNVDVYLTASQKALGSAAGLGLLLLSPKA-LSILDSQNSIAGYYLDLR-------NWLP 228 (384)
T ss_dssp ECTTTTTTSCCCT-TT-----TTCSEEEEETTSTTCCCSSEEEEEECHHH-HHHHHHCCCSCCSTTCHH-------HHHH
T ss_pred ECcccccCccccc-cc-----cCCCEEEecCcccccCCCceEEEEECHHH-HHHhcCCCCCCcccccHH-------HHHH
Confidence 9999766543321 11 16899999999999888889999886543 2221 00 0011110000 0000
Q ss_pred -CCc----cccc-CCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC----CeeEEEEEee
Q 037144 347 -YKD----WQIT-LCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR----NFSLVCFRVT 415 (502)
Q Consensus 347 -~~~----~~~~-~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~----~~~~v~f~~~ 415 (502)
... .... ++.. .....+..++..+...+++++.++..++++++.+.|+++ ++++..++ ...+++|.+.
T Consensus 229 ~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~ 307 (384)
T 3zrp_A 229 VMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPESYSNTVTGVILK 307 (384)
T ss_dssp HHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCSSEEEEECS
T ss_pred HHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccccCccEEEEECC
Confidence 000 0000 0111 122345566776666778999999999999999999998 88877544 2456677764
Q ss_pred cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144 416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV 495 (502)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l 495 (502)
... ..++.+.|.++|..+. +.......++|+++... ++++|++++++.|
T Consensus 308 ~~~-----------------------------~~~~~~~l~~~gi~v~-~g~~~~~~~iRi~~~~~-~~~e~i~~~~~~l 356 (384)
T 3zrp_A 308 VAD-----------------------------PQKVLAGTVNEGVEFA-PGVHPAFKYFRIGHMGW-VTPNDAIIAISVI 356 (384)
T ss_dssp SSC-----------------------------HHHHHHHHHTTTCCCE-ECCCTTCCEEEEECCSS-CCHHHHHHHHHHH
T ss_pred CCC-----------------------------HHHHHHHHHHCCEEEe-cCCCCCcCEEEEecccc-CCHHHHHHHHHHH
Confidence 311 2467777888886543 32211127899998644 6778999999999
Q ss_pred HHHHHh
Q 037144 496 QEHLEA 501 (502)
Q Consensus 496 ~~~~~~ 501 (502)
+++.++
T Consensus 357 ~~~l~~ 362 (384)
T 3zrp_A 357 ERTLRK 362 (384)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988754
No 29
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.96 E-value=2.3e-27 Score=247.25 Aligned_cols=360 Identities=11% Similarity=0.066 Sum_probs=240.1
Q ss_pred cccccCCCCCC---HHHHHHHHHHhhcCCCCccccc-ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144 78 NYFAYFPATSS---VAGIVGEMLSSGFNVVGLDWIS-SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL 153 (502)
Q Consensus 78 ~~~~~~~~~~~---~~~~~~~~l~~~~n~~~~~~~~-~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~ 153 (502)
.||+....++. ....+.+.+....+.+...|.. .+....+..++.+++++++|++.+ ..++|+|+|+++
T Consensus 69 iyld~~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~t~g~t~al 141 (465)
T 3e9k_A 69 IYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEK-------EIALMNALTVNL 141 (465)
T ss_dssp EECBTTTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGG-------GEEECSCHHHHH
T ss_pred EEecCCccCCChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcC-------CEEEECCHHHHH
Confidence 46665544433 3333555554443333333332 233445666789999999999764 689999999988
Q ss_pred HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcCCCCCCE-----EEEecCCCCCcccCHHHHHHHH
Q 037144 154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVGIDRKNI-----RAIKTTKSSSYGLSAESVLSQI 224 (502)
Q Consensus 154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~Glg~~~v-----~~v~~~~~~~~~~d~~~Le~~i 224 (502)
..++.+... .+.++.+|+++..+|++ +...++..|+ ++ ..+|.+ +++.+|+++|+++|
T Consensus 142 ~~~~~~~~~--------~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~---~~~~~~v~~~~~~--~~~~~d~~~l~~~i 208 (465)
T 3e9k_A 142 HLLMLSFFK--------PTPKRYKILLEAKAFPSDHYAIESQLQLHGL---NIEESMRMIKPRE--GEETLRIEDILEVI 208 (465)
T ss_dssp HHHHHHHCC--------CCSSSCEEEEETTCCHHHHHHHHHHHHHTTC---CHHHHEEEECCCT--TCSSCCHHHHHHHH
T ss_pred HHHHHHhcc--------ccCCCCEEEEcCCcCCchHHHHHHHHHHcCC---cceeeeEEEecCC--CCCccCHHHHHHHH
Confidence 776665532 12246678999999987 4557778898 64 334544 35799999999999
Q ss_pred HHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC
Q 037144 225 NLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF 304 (502)
Q Consensus 225 ~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~ 304 (502)
++... .+.+|+++.++|++|.+.|+++|.++|++||+++|+|+||+.+..+.+-.. . ++|++++++||+++
T Consensus 209 ~~~~~---~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~-~-----~~D~~~~s~~K~l~ 279 (465)
T 3e9k_A 209 EKEGD---SIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHD-W-----GVDFACWCSYKYLN 279 (465)
T ss_dssp HHHGG---GEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHH-H-----TCCEEEECSSSTTC
T ss_pred HhcCC---CeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhh-c-----CCCEEEECcccccc
Confidence 85421 256899999999999999999999999999999999999988876654222 2 78999999999995
Q ss_pred -CCCcceEEEeeCchhhhhhhcCCcccccCccCCCC--CcccccCCCcccccCCCC--CCchHHHHHHHHhcHHHHHHHH
Q 037144 305 -TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE--PKEQEVGYKDWQITLCRR--FRSLKLWVVIRNFGVANLRNFI 379 (502)
Q Consensus 305 -~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~--~~~~~~~~~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~ 379 (502)
+|.++|+++++++.. .........|......... .....+......++.+.+ ....++++++..+...+++++.
T Consensus 280 ~gp~~~g~l~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~ 358 (465)
T 3e9k_A 280 AGAGGIAGAFIHEKHA-HTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALR 358 (465)
T ss_dssp CCTTCCCEEEECGGGT-TTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred cCCCceEEEEEcHHHH-hhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHH
Confidence 788889999865421 1111111111111000000 000000011112222222 2235667788877777889999
Q ss_pred HHHHHHHHHHHHHHhcC----------CCeEEecCC----CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhH
Q 037144 380 RSHVGMAKLFERLVTSD----------KRFEVAFPR----NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTN 445 (502)
Q Consensus 380 ~~~~~la~~l~~~l~~~----------~~~~l~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (502)
++..++++++.+.|+++ ++++++.+. ..++++|++...
T Consensus 359 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~~---------------------------- 410 (465)
T 3e9k_A 359 KKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSVP---------------------------- 410 (465)
T ss_dssp HHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECCT----------------------------
T ss_pred HHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecCC----------------------------
Confidence 99999999999999885 799998654 267888877521
Q ss_pred HHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 446 EFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 446 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..++.+.|.++|.++ . ..+..++|+++++..++++||+++++.|+++.++
T Consensus 411 --~~~l~~~L~~~Gi~v-~---~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 411 --NKDVFQELEKRGVVC-D---KRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDS 460 (465)
T ss_dssp --TCCHHHHHHTTTEEC-E---EETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC
T ss_pred --HHHHHHHHHHCCEEE-e---cCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHh
Confidence 124667777788643 2 3345689999866778889999999999998753
No 30
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.96 E-value=1.4e-26 Score=237.94 Aligned_cols=341 Identities=13% Similarity=0.129 Sum_probs=232.0
Q ss_pred CcccccCCCCCCHHHHHHHHHHhhcC--CC-C---c-ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCc
Q 037144 77 PNYFAYFPATSSVAGIVGEMLSSGFN--VV-G---L-DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTT 149 (502)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~~~~n--~~-~---~-~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~gg 149 (502)
..|+++..+++.++. +.+.+...+. .. . . .+..+....+...++.+++++++|.+.+ .+++|+||
T Consensus 23 ~iyld~~~~~~~~~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-------~v~~~~gg 94 (423)
T 3lvm_A 23 PIYLDYSATTPVDPR-VAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-------EIVFTSGA 94 (423)
T ss_dssp SEECBTTTCCCCCHH-HHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESSH
T ss_pred CEeecCCCcCCCCHH-HHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCC-------eEEEeCCh
Confidence 357777665555444 4455554443 11 1 1 2333445567788899999999999754 58999999
Q ss_pred hHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc---CCCCCCEEEEecCCCCCcccCHHHHHHHHHH
Q 037144 150 CEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV---GIDRKNIRAIKTTKSSSYGLSAESVLSQINL 226 (502)
Q Consensus 150 t~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~---Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~ 226 (502)
|+|+..++.+.++.+.+ +++.|+++...|.++..++..+ |+ +++.+|+++ ++.+|+++|+++|++
T Consensus 95 t~a~~~a~~~l~~~~~~-------~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~ 162 (423)
T 3lvm_A 95 TESDNLAIKGAANFYQK-------KGKHIITSKTEHKAVLDTCRQLEREGF---EVTYLAPQR--NGIIDLKELEAAMRD 162 (423)
T ss_dssp HHHHHHHHHHHHHHHTT-------TCCEEEEETTSCHHHHHHHHHHHHTTC---EEEEECCCT--TSCCCHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHhhcc-------CCCEEEECCccchHHHHHHHHHHHcCC---EEEEeccCC--CCccCHHHHHHhcCC
Confidence 99999998877653211 4678999999999998887555 88 999999886 568999999999865
Q ss_pred HHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC
Q 037144 227 DVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT 306 (502)
Q Consensus 227 ~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p 306 (502)
+ +.+|+++.++|++|.+.|+++|+++|++||+++++|++|+.+....+.. . .++|++++++||++ +|
T Consensus 163 ~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~-~-----~~~di~~~s~sK~~-g~ 229 (423)
T 3lvm_A 163 D------TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLS-Q-----LKVDLMSFSGHKIY-GP 229 (423)
T ss_dssp T------EEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTT-T-----SCCSEEEEESTTTT-SC
T ss_pred C------cEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChh-h-----cCCCEEEechHHhc-CC
Confidence 3 4588899999999999999999999999999999999998765533211 1 16899999999965 56
Q ss_pred CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC-CCC-CCchHHHHHHHHhcHHHHHHHHHHHHH
Q 037144 307 LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL-CRR-FRSLKLWVVIRNFGVANLRNFIRSHVG 384 (502)
Q Consensus 307 ~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~-sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~ 384 (502)
.++|++++++... . .+ ..+....... ..... +.. .....+..+++.+ .+.++++.++..+
T Consensus 230 ~g~G~~~~~~~~~-~-~~---~~~~~~~~~~------------~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~ 291 (423)
T 3lvm_A 230 KGIGALYVRRKPR-V-RI---EAQMHGGGHE------------RGMRSGTLPVHQIVGMGEAYRIA-KEEMATEMERLRG 291 (423)
T ss_dssp SSCEEEEECBTTB-C-CC---CCSSCSSCTT------------TTTCCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred CCeEEEEEecccc-C-CC---CccccCCccc------------ccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 6799998875421 1 11 1111110000 00000 101 1112333444443 3347889999999
Q ss_pred HHHHHHHHHhcCCCeEEecCCC---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE
Q 037144 385 MAKLFERLVTSDKRFEVAFPRN---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV 461 (502)
Q Consensus 385 la~~l~~~l~~~~~~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 461 (502)
+++++.+.|+++|++++..++. .++++|.+.... ...+.+.|.+ +
T Consensus 292 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~l~~~l~~---i 339 (423)
T 3lvm_A 292 LRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVE-----------------------------GESLIMALKD---L 339 (423)
T ss_dssp HHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEETTSC-----------------------------HHHHHHHTTT---E
T ss_pred HHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeCCCC-----------------------------HHHHHHHHhh---h
Confidence 9999999999999999986543 357777773221 2244555443 3
Q ss_pred EEEeeeE---------------C-----CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 462 FMTHAIV---------------G-----GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 462 ~~~~~~~---------------~-----g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.+.++.. . ...++|+++. ..++++||+++++.|+++.++
T Consensus 340 ~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~-~~~t~e~i~~~~~~l~~~~~~ 398 (423)
T 3lvm_A 340 AVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLG-RFTTEEEIDYTIELVRKSIGR 398 (423)
T ss_dssp ECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred eeccCccccCCCccccHHHHHhCCCccccCceEEEECC-CCCCHHHHHHHHHHHHHHHHH
Confidence 3332211 0 0368999986 556778999999999988754
No 31
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.95 E-value=5.9e-28 Score=242.47 Aligned_cols=342 Identities=12% Similarity=0.065 Sum_probs=229.7
Q ss_pred ccccCCCCCCHHHHHHHHHHhhc-CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHH
Q 037144 79 YFAYFPATSSVAGIVGEMLSSGF-NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTL 157 (502)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~-n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al 157 (502)
++.+.+++..+|..+.+.+...+ +.....+..++...++.+++.+++++++|.++.. .+++|+|||+|+..++
T Consensus 5 ~~~~~p~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~------~v~~~~g~t~al~~~~ 78 (362)
T 3ffr_A 5 KIYFTPGPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNY------EVLFLASATEIWERII 78 (362)
T ss_dssp CEEECSSSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTE------EEEEESCHHHHHHHHH
T ss_pred ceeccCCCcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCc------EEEEeCCchHHHHHHH
Confidence 45566665555544554444433 3321122356777888899999999999986432 6899999999998777
Q ss_pred HHHHHHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccE
Q 037144 158 TAARDRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPL 235 (502)
Q Consensus 158 ~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~ 235 (502)
.+... + .+++....|++ +...++..|+ +++.++.+. ++.+|+++|+ +++ ++.
T Consensus 79 ~~l~~-----------~--~~i~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~--~~~------~~~ 132 (362)
T 3ffr_A 79 QNCVE-----------K--KSFHCVNGSFSKRFYEFAGELGR---EAYKEEAAF--GKGFYPADIT--VPA------DAE 132 (362)
T ss_dssp HHHCS-----------S--EEEEEECSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCGGGCC--CCT------TCC
T ss_pred HhccC-----------C--cEEEEcCcHHHHHHHHHHHHhCC---CeEEEecCC--CCCCCHHHHh--ccC------Ccc
Confidence 66532 3 34444456665 4456778899 999999875 4689999998 332 245
Q ss_pred EEEEecCCccccccCChhHHHHHHHHh-CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEe
Q 037144 236 FLCATVGTTAITAVDPLKPLCDVAKQF-GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWV 314 (502)
Q Consensus 236 ~Vv~t~gtt~~G~idpl~eI~~i~~~~-g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~ 314 (502)
+|++++++|++|.+.|+++|+++|++| |+|+|+|++|+.+....+ +..+|+++.++|||+++|.|+|++++
T Consensus 133 ~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~--------~~~~d~~~~s~~K~~~~~~G~g~~~~ 204 (362)
T 3ffr_A 133 IICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFD--------WTKIDSVFFSVQKCFGLPAGLGVWIL 204 (362)
T ss_dssp EEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCC--------TTSCSEEEEETTSTTCCCSCCEEEEE
T ss_pred EEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccC--------hhHCcEEEEecccccCCCCceEEEEE
Confidence 888899999999999999999999999 999999999976544322 12489999999999998888999887
Q ss_pred eCchhhhhhhcCC-----cccccCccCCCCCcccccC-CCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 037144 315 KDPSCLLSTLSTN-----PQYLKNEATDQEPKEQEVG-YKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAK 387 (502)
Q Consensus 315 r~~~~l~~~~~~~-----~~yl~~~~~~~~~~~~~~~-~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~ 387 (502)
++.. ........ ..|..... ...+ ........+.. .....+..+++.+..++++++.++..++++
T Consensus 205 ~~~~-~~~~~~~~~gg~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 276 (362)
T 3ffr_A 205 NDRV-IEKSKALLAKRKSIGTYHTIP-------SMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAA 276 (362)
T ss_dssp EHHH-HHHHHHHHHTTCCCCSTTSHH-------HHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CHHH-HHHhhhccccCCCCcccccHH-------HHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 6542 21111100 11110000 0000 00000001111 122345566666666678999999999999
Q ss_pred HHHHHHhcCCCeEEecCC----CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE
Q 037144 388 LFERLVTSDKRFEVAFPR----NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM 463 (502)
Q Consensus 388 ~l~~~l~~~~~~~l~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 463 (502)
++.+.|+++|+++++.+. ...+++|.+.. . ..++.+.|.++|..+.
T Consensus 277 ~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~-----------------------------~~~~~~~l~~~gi~~~ 326 (362)
T 3ffr_A 277 LINTYIESSKVFSFGVEDAKLRSMTTIVANTTM-L-----------------------------PGEINKILEPFDMAVG 326 (362)
T ss_dssp HHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS-C-----------------------------HHHHHHHHGGGTEEEE
T ss_pred HHHHHHHHccCceeccCChhhcCCceEEEecCC-C-----------------------------HHHHHHHHHHCCeEEe
Confidence 999999999999987522 24566776643 1 3467888888886554
Q ss_pred EeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 464 THAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 464 ~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
++....+..++|++++. .+++++|++++++|+++.
T Consensus 327 ~g~~~~~~~~iRis~~~-~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 327 AGYGSKKETQIRIANFP-AHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp ECSGGGTTTEEEEECCT-TSCHHHHHHHHHHHHHHT
T ss_pred cCccccCCCEEEEECCC-CCCHHHHHHHHHHHHHHh
Confidence 43222345689999875 467789999999998864
No 32
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.95 E-value=3.4e-27 Score=236.14 Aligned_cols=334 Identities=14% Similarity=0.014 Sum_probs=225.8
Q ss_pred CCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHH
Q 037144 84 PATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDR 163 (502)
Q Consensus 84 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~ 163 (502)
+++..++..+.+.+...+.. ..++.......++++++++++|.+.+ .+++|+|||+|+..++.+...
T Consensus 7 ~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~-------~i~~~~g~t~a~~~~~~~~~~- 73 (352)
T 1iug_A 7 PGPVRLHPKALEALARPQLH-----HRTEAAREVFLKARGLLREAFRTEGE-------VLILTGSGTLAMEALVKNLFA- 73 (352)
T ss_dssp SSSCCCCHHHHHHHHSCCCC-----TTSHHHHHHHHHHHHHHHHHHTCSSE-------EEEEESCHHHHHHHHHHHHCC-
T ss_pred CCCCCCCHHHHHHhccCCCC-----ccCHHHHHHHHHHHHHHHHHhCCCCc-------eEEEcCchHHHHHHHHHhccC-
Confidence 44444445566666665542 13455666777899999999998743 589999999999888877632
Q ss_pred HHHHhCccCCCCeEEEeCCCCchhHH--HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec
Q 037144 164 VLKKIGRENISKLVVYSSDQTHCAFQ--KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV 241 (502)
Q Consensus 164 ~~~~~~~~~~~~~~v~~s~~~H~s~~--~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~ 241 (502)
+++.|+++..+|++.. +.++..|+ +++.+|+++ ++.+|+++|++ + .+.+|+++.
T Consensus 74 ----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~---~------~~~~v~~~~ 129 (352)
T 1iug_A 74 ----------PGERVLVPVYGKFSERFYEIALEAGL---VVERLDYPY--GDTPRPEDVAK---E------GYAGLLLVH 129 (352)
T ss_dssp ----------TTCEEEEEECSHHHHHHHHHHHHTTC---EEEEEECCT--TCCCCTTTSCC---S------SCSEEEEES
T ss_pred ----------CCCeEEEEeCCchhHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHhc---c------CCcEEEEEE
Confidence 5678888888999864 45566798 999999975 45899998877 1 234788899
Q ss_pred CCccccccCChhHHHHHHHHh--CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchh
Q 037144 242 GTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSC 319 (502)
Q Consensus 242 gtt~~G~idpl~eI~~i~~~~--g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~ 319 (502)
++|++|.+.|+++|.++|++| |+|+|+|++|+.+....+ .... ++|+++.++|||+++|.|+|++++++..
T Consensus 130 ~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~-~~~~-----~~d~~~~s~~K~~~~~~g~G~~~~~~~~- 202 (352)
T 1iug_A 130 SETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVA-LEAM-----GVDAAASGSQKGLMCPPGLGFVALSPRA- 202 (352)
T ss_dssp EETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCC-SGGG-----TCSEEEEESSSTTCCCSCEEEEEECHHH-
T ss_pred ecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCccee-cccc-----CeeEEEecCcccccCCCceeEEEECHHH-
Confidence 999999999999999999999 999999999975543322 1111 5899999999999999899999886542
Q ss_pred hhhhhcCCcccccCccCCCCCcccccC-CCcccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144 320 LLSTLSTNPQYLKNEATDQEPKEQEVG-YKDWQITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK 397 (502)
Q Consensus 320 l~~~~~~~~~yl~~~~~~~~~~~~~~~-~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 397 (502)
+. .+.. ..|..... .... .......++... ....+..++..+... ++++.++..++++++.+.|+++
T Consensus 203 ~~-~~~~-~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~- 271 (352)
T 1iug_A 203 LE-RLKP-RGYYLDLA-------RELKAQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG- 271 (352)
T ss_dssp HH-TCCC-CSSTTCHH-------HHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-
T ss_pred HH-HhhC-CCceeeHH-------HHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC-
Confidence 22 1111 11100000 0000 000000011111 112344555554444 7889999999999999999998
Q ss_pred CeEEecCC-CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEE
Q 037144 398 RFEVAFPR-NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRF 476 (502)
Q Consensus 398 ~~~l~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~ 476 (502)
++++..++ ..++++|+++.. . + ..++.++|.++|..+..+....+..++|+
T Consensus 272 g~~~~~~~~~~~~~~~~~~~~-~-------------------------~--~~~~~~~l~~~gi~v~~~~~~~~~~~iRi 323 (352)
T 1iug_A 272 GLRPVPKRFSPAVAAFYLPEG-V-------------------------P--YARVKEAFAQRGAVIAGGQGPLKGKVFRL 323 (352)
T ss_dssp TCEESCSSBCTTCEEEECCTT-C-------------------------C--HHHHHHHHHTTTEECEECCGGGTTTEEEE
T ss_pred CCcccccccCCeEEEEEcCCC-C-------------------------C--HHHHHHHHHHCCEEEEeCCCccCCCEEEE
Confidence 89887543 455777776421 1 0 24577778888864433321123468999
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 477 AAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 477 ~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+++. .++++++++++++|+++.++
T Consensus 324 ~~~~-~~~~~~i~~~~~~l~~~~~~ 347 (352)
T 1iug_A 324 SLMG-AYDRYEALGVAGMFREVLEE 347 (352)
T ss_dssp CCCS-SCCHHHHHHHHHHHHHHHHH
T ss_pred Eccc-cCCHHHHHHHHHHHHHHHHH
Confidence 9864 46677999999999988764
No 33
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.95 E-value=1.8e-26 Score=236.55 Aligned_cols=357 Identities=12% Similarity=0.049 Sum_probs=232.1
Q ss_pred cccccCCCCCCHHHHHHHHHHhhcCC---C-C-cccccChhhHHHHHHHHHHHHHhcCC-CCccCcCCCCcEEEcCCchH
Q 037144 78 NYFAYFPATSSVAGIVGEMLSSGFNV---V-G-LDWISSPAAVELENIVMDWLGQMLDL-PKSFLFSGNGGGVIQGTTCE 151 (502)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~n~---~-~-~~~~~~p~~~~le~~~~~~l~~l~g~-~~~~~~~~~~~g~~t~ggt~ 151 (502)
.||++...++.++. +.+.+...+.. + . ..+..++.......++.+++++++|. +.. .+++|+|||+
T Consensus 30 i~l~~~~~~~~~~~-v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~-------~v~~~~g~t~ 101 (420)
T 1t3i_A 30 VYLDNAATSQKPRA-VLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPR-------EIVYTRNATE 101 (420)
T ss_dssp EECBTTTCCCCCHH-HHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGG-------GEEEESSHHH
T ss_pred EEecCCccCCCCHH-HHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCC-------eEEEcCChHH
Confidence 35665544443444 44444444422 1 1 11222222345566788899999998 433 6899999999
Q ss_pred HHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHH
Q 037144 152 ALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA----FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLD 227 (502)
Q Consensus 152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~ 227 (502)
|+..++.+++.... .+++.|+++..+|.+ +...++..|+ +++.+|++. ++.+|+++|+++|+++
T Consensus 102 a~~~~~~~~~~~~~-------~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~ 169 (420)
T 1t3i_A 102 AINLVAYSWGMNNL-------KAGDEIITTVMEHHSNLVPWQMVAAKTGA---VLKFVQLDE--QESFDLEHFKTLLSEK 169 (420)
T ss_dssp HHHHHHHHTHHHHC-------CTTCEEEEETTCCGGGTHHHHHHHHHHCC---EEEEECBCT--TSSBCHHHHHHHCCTT
T ss_pred HHHHHHHHhhhccc-------CCCCEEEECcchhHHHHHHHHHHHHhcCc---EEEEeccCC--CCCcCHHHHHHhhCCC
Confidence 99988887742101 156788889999988 6677888999 999999974 5789999999998643
Q ss_pred HhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC
Q 037144 228 VEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL 307 (502)
Q Consensus 228 ~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~ 307 (502)
+.+|+++.++|++|.+.|+++|.++|++||+|+|+|++|+.+....+ .... +.|+++.++||.+ +|.
T Consensus 170 ------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-~~~~-----~~di~~~s~sK~~-~~~ 236 (420)
T 1t3i_A 170 ------TKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLD-VQLI-----DCDWLVASGHKMC-APT 236 (420)
T ss_dssp ------EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-HHHH-----TCSEEEEEGGGTT-SCT
T ss_pred ------ceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCc-hhhc-----CCCEEEEehhhhc-CCC
Confidence 45888999999999999999999999999999999999987654322 2222 5899999999955 566
Q ss_pred cceEEEeeCchhhhhhhcCC-cccccCccCCCCCcccccCCCcccccCCCC-C-CchHHHHHHHHhcHHHHHHHHHHHHH
Q 037144 308 DCCCLWVKDPSCLLSTLSTN-PQYLKNEATDQEPKEQEVGYKDWQITLCRR-F-RSLKLWVVIRNFGVANLRNFIRSHVG 384 (502)
Q Consensus 308 ~~g~~~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~~~~~ 384 (502)
|+|++++++ .... .+... ..+....... .....+......+..+.. . ..++++.+++.+...++.++.++..+
T Consensus 237 g~G~~~~~~-~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~ 312 (420)
T 1t3i_A 237 GIGFLYGKE-EILE-AMPPFFGGGEMIAEVF--FDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVE 312 (420)
T ss_dssp TCEEEEECH-HHHH-HSCCCSCSTTSEEEEC--SSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred ceEEEEEch-HHHh-hcCceecCCCcccccc--ccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 788888764 3322 22111 0000000000 000000000111111111 1 11233335666655678889999999
Q ss_pred HHHHHHHHHhcCCCeEEecCC-----CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcC
Q 037144 385 MAKLFERLVTSDKRFEVAFPR-----NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSG 459 (502)
Q Consensus 385 la~~l~~~l~~~~~~~l~~~~-----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 459 (502)
+++++.+.|+++|+++++.+. ..++++|.+++.. ..++.+.+.+.|
T Consensus 313 ~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~g 363 (420)
T 1t3i_A 313 LTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGLH-----------------------------ASDVATMVDQDG 363 (420)
T ss_dssp HHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTBC-----------------------------HHHHHHHHHTTT
T ss_pred HHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECCCC-----------------------------HHHHHHHHHHCC
Confidence 999999999999899988654 3678888753210 235667777778
Q ss_pred cEEEEee-------eECC-EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 460 KVFMTHA-------IVGG-IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 460 ~~~~~~~-------~~~g-~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..+..+. ...+ ..++|+++. ..++++|+++++++|+++.+.
T Consensus 364 i~v~~~~~~~~~~~~~~g~~~~iRis~~-~~~~~~~i~~~~~~l~~~~~~ 412 (420)
T 1t3i_A 364 IAIRSGHHCTQPLHRLFDASGSARASLY-FYNTKEEIDLFLQSLQATIRF 412 (420)
T ss_dssp EECBCSCTTCHHHHHHTTCCCCEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEeeccccchHHHHhcCCCCeEEEecC-CCCCHHHHHHHHHHHHHHHHH
Confidence 6433221 1112 568999986 446778999999999988764
No 34
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.95 E-value=9.6e-27 Score=236.90 Aligned_cols=353 Identities=12% Similarity=0.065 Sum_probs=233.5
Q ss_pred CCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHH
Q 037144 76 SPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLC 155 (502)
Q Consensus 76 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~ 155 (502)
.++.+.+.+++..++..+.+.+...+.. .| ++.......++++++++++|.+.+. .+++|+|||+++..
T Consensus 16 ~~~~~~~~~~p~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~l~~~la~~~~~~~~~------~v~~~~g~t~al~~ 84 (396)
T 2ch1_A 16 IPEKIMMGPGPSNCSKRVLTAMTNTVLS---NF--HAELFRTMDEVKDGLRYIFQTENRA------TMCVSGSAHAGMEA 84 (396)
T ss_dssp CCCCBCCSSSSCCCCHHHHHHTTSCCCC---TT--CHHHHHHHHHHHHHHHHHHTCCCSC------EEEESSCHHHHHHH
T ss_pred CCcceeecCCCCCCCHHHHHHhcccccc---CC--ChhHHHHHHHHHHHHHHHhCCCCCc------EEEECCcHHHHHHH
Confidence 4555666665555555565655544422 23 3444556678889999999987531 47899999999988
Q ss_pred HHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH--HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCc
Q 037144 156 TLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ--KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELI 233 (502)
Q Consensus 156 al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~--~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~ 233 (502)
++.+... +++.|+++..+|.+.. +.++..|+ +++.+|+++ ++.+|+++|++++++..
T Consensus 85 ~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~~----- 143 (396)
T 2ch1_A 85 MLSNLLE-----------EGDRVLIAVNGIWAERAVEMSERYGA---DVRTIEGPP--DRPFSLETLARAIELHQ----- 143 (396)
T ss_dssp HHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCT--TSCCCHHHHHHHHHHHC-----
T ss_pred HHHHhcC-----------CCCeEEEEcCCcccHHHHHHHHHcCC---ceEEecCCC--CCCCCHHHHHHHHHhCC-----
Confidence 8776632 5678888888998874 57788999 999999975 46899999999998621
Q ss_pred cEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEE
Q 037144 234 PLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLW 313 (502)
Q Consensus 234 p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~ 313 (502)
+.+|+++.++|++|.+.|+++|.++|++||+++++|++|+.+....+ +... ++|+++.++||+++.|.++|+++
T Consensus 144 ~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~-----~~~~-~~d~~~~s~~K~~~~~~g~g~~~ 217 (396)
T 2ch1_A 144 PKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFY-----MDKW-EIDAVYTGAQKVLGAPPGITPIS 217 (396)
T ss_dssp CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCCEEECCCC-CCCCCSSCEEEE
T ss_pred CCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccc-----hhhc-CcCEEEEcCCccccCCCCeEEEE
Confidence 23788899999999999999999999999999999999985433221 1111 57999999999999998999888
Q ss_pred eeCchhhhhhhcCC----cccccCccCCCCCcccccCC--CcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHH
Q 037144 314 VKDPSCLLSTLSTN----PQYLKNEATDQEPKEQEVGY--KDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMA 386 (502)
Q Consensus 314 ~r~~~~l~~~~~~~----~~yl~~~~~~~~~~~~~~~~--~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la 386 (502)
+++. .+. .+... ..+....... ...+.. ......++.. .....+..+++.+..++++++.++..+++
T Consensus 218 ~~~~-~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 291 (396)
T 2ch1_A 218 ISPK-ALD-VIRNRRTKSKVFYWDLLLL----GNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECA 291 (396)
T ss_dssp ECHH-HHH-HHHTCSSCCSCGGGCHHHH----HHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ECHH-HHH-hhhhccCcccceEechHHH----HHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 8653 322 22111 1111110000 000000 0000001111 11234445666555577889999999999
Q ss_pred HHHHHHHhcCCCeEEecCCC---e-eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcE
Q 037144 387 KLFERLVTSDKRFEVAFPRN---F-SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKV 461 (502)
Q Consensus 387 ~~l~~~l~~~~~~~l~~~~~---~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 461 (502)
+++.+.|+++ |++++.+.. . .+++|+++.. . + ..++.++|.++ |..
T Consensus 292 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~-------------------------~--~~~~~~~L~~~~gi~ 342 (396)
T 2ch1_A 292 QILYEGLGKM-GLDIFVKDPRHRLPTVTGIMIPKG-V-------------------------D--WWKVSQYAMNNFSLE 342 (396)
T ss_dssp HHHHHHHHHH-TCCBSSCSGGGBCTTEEEEECCTT-C-------------------------C--HHHHHHHHHHHHCBC
T ss_pred HHHHHHHHHC-CCeeccCCccccCCceEEEEcCCC-C-------------------------C--HHHHHHHHHHhCCEE
Confidence 9999999988 888764332 1 2667766321 1 0 23566666654 765
Q ss_pred EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 462 FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 462 ~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+..+....+..++|++++.+.++++++++++++|+++.++
T Consensus 343 v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~ 382 (396)
T 2ch1_A 343 VQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKA 382 (396)
T ss_dssp CBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred EecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHH
Confidence 4322212234689999865667888999999999988754
No 35
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.95 E-value=3e-26 Score=231.56 Aligned_cols=339 Identities=9% Similarity=-0.032 Sum_probs=223.7
Q ss_pred CCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHH
Q 037144 83 FPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARD 162 (502)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~ 162 (502)
.+++..+|..+.+.+...+.. . .++...++..++.+++++++|.+... ...++|+|||+|+..++.+...
T Consensus 24 ~pgp~~~~~~v~~a~~~~~~~---~--~~~~~~~~~~~~~~~la~~~g~~~~~-----~~i~~~~ggt~al~~~~~~~~~ 93 (376)
T 3f0h_A 24 TVGPVMSSEEVRAIGAEQVPY---F--RTTEFSSTMLENEKFMLEYAKAPEGS-----KAVFMTCSSTGSMEAVVMNCFT 93 (376)
T ss_dssp SSSSCCCCHHHHHHHTSCCCC---C--SSHHHHHHHHHHHHHHHHHHTCCTTC-----EEEEESSCHHHHHHHHHHHHCC
T ss_pred cCCCCCCcHHHHHHhcCCCCC---C--CCHHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCChhHHHHHHHHhccC
Confidence 445545555555555543321 1 24566678888999999999997532 1344588999999888776643
Q ss_pred HHHHHhCccCCCCeEEEeCCCCchhH--HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe
Q 037144 163 RVLKKIGRENISKLVVYSSDQTHCAF--QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCAT 240 (502)
Q Consensus 163 ~~~~~~~~~~~~~~~v~~s~~~H~s~--~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t 240 (502)
+++.|+++...+++. ...+...|+ +++.+|++. ++.+|+++|+++++++ +.+|+++
T Consensus 94 -----------~gd~vi~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~~~------~~~v~~~ 151 (376)
T 3f0h_A 94 -----------KKDKVLVIDGGSFGHRFVQLCEIHEI---PYVALKLEH--GKKLTKEKLYEYDNQN------FTGLLVN 151 (376)
T ss_dssp -----------TTCCEEEEESSHHHHHHHHHHHHTTC---CEEEEECCT--TCCCCHHHHHTTTTSC------CCEEEEE
T ss_pred -----------CCCeEEEEeCChhhHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHHHhhccC------ceEEEEe
Confidence 556666666555553 345677888 999999875 4689999999876433 3478888
Q ss_pred cCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhh
Q 037144 241 VGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCL 320 (502)
Q Consensus 241 ~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l 320 (502)
.++|++|.+.|+++|+++|++||+++|+|++++.+....+ .... ++|++++++||++++|.|+|++++++.. .
T Consensus 152 ~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~-~~~~-----~~d~~~~s~~K~l~~~~G~g~~~~~~~~-~ 224 (376)
T 3f0h_A 152 VDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFN-MNEC-----GADVMITGSQKVLACPPGISVIVLAPRG-V 224 (376)
T ss_dssp SEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-HHHH-----TCSEEEEETTTTTCCCSSCEEEEECHHH-H
T ss_pred cccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCcccc-cccc-----CccEEEecCcccccCCCceEEEEECHHH-H
Confidence 8999999999999999999999999999999987655432 1111 5899999999999988889998776542 2
Q ss_pred hhhhc-CCcccccCccCCCCCcccccCCCcccccCCCC--CCc---hHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHH
Q 037144 321 LSTLS-TNPQYLKNEATDQEPKEQEVGYKDWQITLCRR--FRS---LKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERLV 393 (502)
Q Consensus 321 ~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~--~~a---l~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l 393 (502)
..... ....+...... .. ......+.. ... .++..+++.+..+ +++++.++..++++++.+.|
T Consensus 225 ~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L 294 (376)
T 3f0h_A 225 ERVEKSKVRTMYFDLKD-------AL---KNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKI 294 (376)
T ss_dssp HHHHTCCCCCSTTCHHH-------HH---HHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhhcCCCCceeecHHH-------HH---hhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 22211 11111110000 00 000000111 111 3455666666555 68899999999999999999
Q ss_pred hcCCCeEEecCCCee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeECCE
Q 037144 394 TSDKRFEVAFPRNFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVGGI 471 (502)
Q Consensus 394 ~~~~~~~l~~~~~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~ 471 (502)
+++ ++++..+...+ ++++.. .+. ...++.+.|.++ |..+.++....+.
T Consensus 295 ~~~-~~~~~~~~~~~~~~~~~~--~~~---------------------------~~~~l~~~l~~~~gi~v~~g~~~~~~ 344 (376)
T 3f0h_A 295 KDL-PFELVSESPANGVTSVHP--TTA---------------------------NAYDIFLKLKDEYGIWICPNGGEMKD 344 (376)
T ss_dssp TTS-SEEECCSSBBTTEEEEEE--SSS---------------------------CHHHHHHHHHHHSSEECEECCGGGTT
T ss_pred HHc-CCccCccccCceEEEEeC--CCC---------------------------CHHHHHHHHHHhCCEEEecCccccCC
Confidence 988 68876543333 334432 211 024677778777 7544333212234
Q ss_pred EEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 472 YVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 472 ~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.++|+++.. .++++++++++++|+++.++
T Consensus 345 ~~lRis~~~-~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 345 TIFRVGHIG-ALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp TCEEEECCS-SCCHHHHHHHHHHHHHHHHT
T ss_pred CEEEEecCC-CCCHHHHHHHHHHHHHHHHh
Confidence 689999864 46778999999999998754
No 36
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.95 E-value=1.6e-25 Score=226.63 Aligned_cols=341 Identities=12% Similarity=0.089 Sum_probs=225.0
Q ss_pred cccccCCCCCCHHHHHHHHHHhhcCC----CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHH
Q 037144 78 NYFAYFPATSSVAGIVGEMLSSGFNV----VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEAL 153 (502)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~n~----~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~ 153 (502)
.|+++...++.++.++ +.+...+.. ....+..+........++.+++++++|.+.+ .+++|+|||+|+
T Consensus 3 ~yld~~~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a~ 74 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVL-EEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPS-------EIFFTSCATESI 74 (384)
T ss_dssp EECBTTTCCCCCHHHH-HHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGG-------GEEEESCHHHHH
T ss_pred EEEecCccCCCCHHHH-HHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCC-------eEEEECCHHHHH
Confidence 3566655555445444 333333321 1111222334466777888999999998754 589999999999
Q ss_pred HHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH---HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc
Q 037144 154 LCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA---QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA 230 (502)
Q Consensus 154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa---~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~ 230 (502)
..++.+++.... .+++.|+++..+|+++...+ +..|+ +++.+|+++ ++.+|+++|+++|+++
T Consensus 75 ~~~~~~~~~~~~-------~~gd~vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~--- 139 (384)
T 1eg5_A 75 NWILKTVAETFE-------KRKRTIITTPIEHKAVLETMKYLSMKGF---KVKYVPVDS--RGVVKLEELEKLVDED--- 139 (384)
T ss_dssp HHHHHHHHHHTT-------TTCCEEEECTTSCHHHHHHHHHHHHTTC---EEEECCBCT--TSCBCHHHHHHHCCTT---
T ss_pred HHHHHhhhhhcc-------CCCCEEEECCCCchHHHHHHHHHHhcCC---EEEEEccCC--CCccCHHHHHHHhCCC---
Confidence 988887763100 05678899999999887766 67788 999999875 4689999999998643
Q ss_pred CCccEEEEEecCCccccccCChhHHHHHHHHhC--CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc
Q 037144 231 ELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG--IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD 308 (502)
Q Consensus 231 g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g--~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~ 308 (502)
+.+|+++.++|++|.+.|+++|.++|++|| +++|+|++|+.+....+ +... ++|++++++||+++ |.|
T Consensus 140 ---~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~-----~~~~-~~di~~~s~sK~~g-~~G 209 (384)
T 1eg5_A 140 ---TFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFS-----LEKL-EVDYASFSAHKFHG-PKG 209 (384)
T ss_dssp ---EEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCC-----CTTT-CCSEEEEEGGGGTS-CTT
T ss_pred ---CeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccC-----chhc-CCCEEEecHHHhcC-CCc
Confidence 457888999999999999999999999999 99999999873322211 1122 58999999999865 556
Q ss_pred ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 037144 309 CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAK 387 (502)
Q Consensus 309 ~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~ 387 (502)
+|++++++...+. .++...... . . . ..++.. .....++.+++.+ .++++++.++..++++
T Consensus 210 ~G~~~~~~~~~~~-------~~~~~~~~~-----~--~---~-~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~ 270 (384)
T 1eg5_A 210 VGITYIRKGVPIR-------PLIHGGGQE-----R--G---L-RSGTQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRS 270 (384)
T ss_dssp CEEEEECTTSCCC-------CSBCSSCTT-----T--T---T-BCSCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCccc-------cccccCccc-----c--c---c-cCCCCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHH
Confidence 8998886542011 111110000 0 0 0 001111 1122334455442 4567889999999999
Q ss_pred HHHHHHhcCCCeEEecCC---CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE
Q 037144 388 LFERLVTSDKRFEVAFPR---NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT 464 (502)
Q Consensus 388 ~l~~~l~~~~~~~l~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 464 (502)
++.+.|++ +++++..++ ...++.|.+.... ..++.+.|.+.|..+..
T Consensus 271 ~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~gi~v~~ 320 (384)
T 1eg5_A 271 KLVSGLMN-LGAHIITPLEISLPNTLSVSFPNIR-----------------------------GSTLQNLLSGYGIYVST 320 (384)
T ss_dssp HHHHHHHT-TTCEECSCTTSBCTTEEEEECTTCC-----------------------------HHHHHHHHHHTTEECBC
T ss_pred HHHHHhCC-CCeEEeCCcccCCCCEEEEEeCCCC-----------------------------HHHHHHHHhhCCeEEec
Confidence 99999998 689887543 2346677654211 23566677677764433
Q ss_pred eeeEC-------------------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 465 HAIVG-------------------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 465 ~~~~~-------------------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+..+. +..++|+++. ..++++|++++++.|+++.++
T Consensus 321 g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~ 375 (384)
T 1eg5_A 321 SSACTSKDERLRHVLDAMGVDRRIAQGAIRISLC-KYNTEEEVDYFLKKIEEILSF 375 (384)
T ss_dssp ------------CHHHHTTCCHHHHHHEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCcchHHHHHcCCChhhcCCeEEEECC-CCCCHHHHHHHHHHHHHHHHH
Confidence 22111 1368999975 456778999999999988765
No 37
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.95 E-value=4.7e-26 Score=232.25 Aligned_cols=357 Identities=15% Similarity=0.076 Sum_probs=231.3
Q ss_pred cccccCCCCCCHHHHHHHHHHhhcCC-----CCcccccChhhHHHHHHHHHHHHHhcCC-CCccCcCCCCcEEEcCCchH
Q 037144 78 NYFAYFPATSSVAGIVGEMLSSGFNV-----VGLDWISSPAAVELENIVMDWLGQMLDL-PKSFLFSGNGGGVIQGTTCE 151 (502)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~n~-----~~~~~~~~p~~~~le~~~~~~l~~l~g~-~~~~~~~~~~~g~~t~ggt~ 151 (502)
.||++...++.++. +.+.+...+.. ....+..+........++++++++++|. +.. ..++|+|||+
T Consensus 25 i~l~~~~~~~~~~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~-------~v~~~~g~t~ 96 (406)
T 1kmj_A 25 AYLDSAASAQKPSQ-VIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAE-------ELVFVRGTTE 96 (406)
T ss_dssp EECCTTTCCCCCHH-HHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGG-------GEEEESSHHH
T ss_pred EEecCCccCCCCHH-HHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCC-------eEEEeCChhH
Confidence 46666655554444 44444444322 1111111222355666788899999998 333 6899999999
Q ss_pred HHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH----HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHH
Q 037144 152 ALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF----QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLD 227 (502)
Q Consensus 152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~----~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~ 227 (502)
|+..++.+++.... .+++.|+++..+|++. ...++..|+ +++.+|+++ ++.+|+++|+++|+++
T Consensus 97 a~~~~~~~~~~~~~-------~~gd~vl~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~l~~~ 164 (406)
T 1kmj_A 97 GINLVANSWGNSNV-------RAGDNIIISQMEHHANIVPWQMLCARVGA---ELRVIPLNP--DGTLQLETLPTLFDEK 164 (406)
T ss_dssp HHHHHHHHTHHHHC-------CTTCEEEEETTCCGGGTHHHHHHHHHHTC---EEEEECBCT--TSCBCGGGHHHHCCTT
T ss_pred HHHHHHHHhhhhcC-------CCCCEEEEecccchHHHHHHHHHHHhCCC---EEEEEecCC--CCCcCHHHHHHHhccC
Confidence 99988887742111 1567888888898764 345778899 999999875 4689999999998643
Q ss_pred HhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC
Q 037144 228 VEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL 307 (502)
Q Consensus 228 ~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~ 307 (502)
+.+|+++.++|++|.+.|+++|+++|++||+++++|++|+.+....+ .... +.|+++.++||++ +|.
T Consensus 165 ------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~-~~~~-----~~d~~~~s~~K~~-g~~ 231 (406)
T 1kmj_A 165 ------TRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVD-VQAL-----DCDFYVFSGHKLY-GPT 231 (406)
T ss_dssp ------EEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-HHHH-----TCSEEEEEGGGTT-SCT
T ss_pred ------CeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCc-cccc-----CCCEEEEEchhcc-CCC
Confidence 45888999999999999999999999999999999999987654322 2221 6899999999988 566
Q ss_pred cceEEEeeCchhhhhhhcCCcccccCccCCCCCcc--cccCCCcccccCCCC-CC-chHHHHHHHHhcHHHHHHHHHHHH
Q 037144 308 DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE--QEVGYKDWQITLCRR-FR-SLKLWVVIRNFGVANLRNFIRSHV 383 (502)
Q Consensus 308 ~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~--~~~~~~~~~~~~sr~-~~-al~~~~~l~~~g~~g~~~~~~~~~ 383 (502)
|+|++++++ .... .+.... ............ ..+....+.++.+.. .. .+++..+++.+...+++++.++..
T Consensus 232 G~G~~~~~~-~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 307 (406)
T 1kmj_A 232 GIGILYVKE-ALLQ-EMPPWE--GGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQ 307 (406)
T ss_dssp TCEEEEECH-HHHH-HCCCSS--CSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CcEEEEEeH-HHHh-hcCCcc--cCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 789998863 3322 221110 000000000000 000000011111111 11 122334555555557888899999
Q ss_pred HHHHHHHHHHhcCCCeEEecCC-CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEE
Q 037144 384 GMAKLFERLVTSDKRFEVAFPR-NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVF 462 (502)
Q Consensus 384 ~la~~l~~~l~~~~~~~l~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 462 (502)
++++++.+.|+++|++++..+. ..++++|.+.+.. ..++.+.+.+.|..+
T Consensus 308 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~gi~v 358 (406)
T 1kmj_A 308 NLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHH-----------------------------AYDVGSFLDNYGIAV 358 (406)
T ss_dssp HHHHHHHHHHTTSTTEEEESCTTCCSEEEEEETTCC-----------------------------HHHHHHHHHHTTEEC
T ss_pred HHHHHHHHHHhcCCCeEEecCCCcCCEEEEEECCCC-----------------------------HHHHHHHHhhCCcEE
Confidence 9999999999999899988542 6778888763211 234566777778654
Q ss_pred EEeee--------ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 463 MTHAI--------VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 463 ~~~~~--------~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.++.. ++...++|+++. ..++++|+++++++|+++.+.
T Consensus 359 ~~g~~~~~~~~~~~g~~~~iRis~~-~~~t~~~i~~~~~~l~~~~~~ 404 (406)
T 1kmj_A 359 RTGHHCAMPLMAYYNVPAMCRASLA-MYNTHEEVDRLVTGLQRIHRL 404 (406)
T ss_dssp EEECTTCHHHHHHTTCSCEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred EeccccchHHHHhcCCCCeEEEEee-cCCCHHHHHHHHHHHHHHHHh
Confidence 33321 122478999986 446777999999999988764
No 38
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.95 E-value=1.1e-26 Score=236.87 Aligned_cols=352 Identities=12% Similarity=0.066 Sum_probs=210.8
Q ss_pred CCcccccCCCCCCHHHHHHHHHHhhc----CCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchH
Q 037144 76 SPNYFAYFPATSSVAGIVGEMLSSGF----NVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCE 151 (502)
Q Consensus 76 ~p~~~~~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~ 151 (502)
+..|+++..+++.++.++ +.+...+ .+....+..+....++..++.+++++++|.+.+ .+++|+||++
T Consensus 20 ~~iyld~~~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-------~v~~~~g~t~ 91 (400)
T 3vax_A 20 HMTYLDAAATTRVDQRVA-DIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPD-------ELIFTSGATE 91 (400)
T ss_dssp --CCCCCCCCSSSCHHHH-HHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGG-------GEEEESCHHH
T ss_pred CcEEecCCCCCCCCHHHH-HHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCC-------cEEEeCCHHH
Confidence 456777766555555444 3333322 222223444455667788899999999999754 5899999999
Q ss_pred HHHHHHHHHHHHHHHHhCccCCCCe-EEEeCCCCchhHHHHHHH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHH
Q 037144 152 ALLCTLTAARDRVLKKIGRENISKL-VVYSSDQTHCAFQKAAQI---VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLD 227 (502)
Q Consensus 152 a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~aa~~---~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~ 227 (502)
|+..++.+.+....+ +++ .|+++...|+++...+.. .|+ +++.+|+++ ++.+|+++|+++|+++
T Consensus 92 al~~~~~~l~~~~~~-------~gd~~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~ 159 (400)
T 3vax_A 92 SNNIALLGLAPYGER-------TGRRHIITSAIEHKAVLEPLEHLAGRGF---EVDFLTPGP--SGRISVEGVMERLRPD 159 (400)
T ss_dssp HHHHHHHTTHHHHHH-------HTCCEEEEETTSCHHHHHHHHHHHTTTC---EEEEECCCT--TCCCCHHHHHTTCCTT
T ss_pred HHHHHHHHHHHhhcc-------CCCCEEEECccccHhHHHHHHHHHhcCC---eEEEEccCC--CCCcCHHHHHHhcCCC
Confidence 999888877532111 466 888899999998776665 477 999999875 5689999999998653
Q ss_pred HhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC
Q 037144 228 VEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL 307 (502)
Q Consensus 228 ~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~ 307 (502)
+.+|+++.++|++|.+.|+++|.++|++||+++++|++|+.+....+ +... +|+++.++||+ ++|.
T Consensus 160 ------~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~-----~~~~--~d~~~~s~~K~-~g~~ 225 (400)
T 3vax_A 160 ------TLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGD-----LTTP--IDMISISGHKI-GAPK 225 (400)
T ss_dssp ------EEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGG-----GGSC--CSEEEEETGGG-TSCS
T ss_pred ------ceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcC-----hhhc--CcEEEEeHHHh-CCCC
Confidence 45899999999999999999999999999999999999976543321 2222 89999999995 5577
Q ss_pred cceEEE-eeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC-CC-CchHHHHHHHHhcHHHHHHHHHHHHH
Q 037144 308 DCCCLW-VKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR-RF-RSLKLWVVIRNFGVANLRNFIRSHVG 384 (502)
Q Consensus 308 ~~g~~~-~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr-~~-~al~~~~~l~~~g~~g~~~~~~~~~~ 384 (502)
++|+++ ++++...... .....++..... ......+. .. ....+..+++.+ .++++++.++..+
T Consensus 226 g~g~~~~~~~~~~~~~~-~~~~~~~~~~~~------------~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~ 291 (400)
T 3vax_A 226 GVGALVTRRREEMDDER-VPLEPIMFGGGQ------------ERKLRPGTLPVPLIMGLAEAAKIF-EAEHAQWQVAAQD 291 (400)
T ss_dssp SCEEEEECBCSSSTTCB-CCCCCSSCSSCT------------GGGTSCSCCCHHHHHHHHHHHHHH-HHSHHHHHHHHHH
T ss_pred ceEEEEEecchhccccc-cccCceecCCCc------------eeeeecCCCCHHHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 899999 8774322100 000111111000 00000010 10 112222334332 4577889999999
Q ss_pred HHHHHHHHHhcCCCeEEecCCC---eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHH-HHHHhcCc
Q 037144 385 MAKLFERLVTSDKRFEVAFPRN---FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELL-ESINVSGK 460 (502)
Q Consensus 385 la~~l~~~l~~~~~~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~g~ 460 (502)
+++++.+.|+ .+++++..++. .+++.|...... . .++.+.+. .-+...|.
T Consensus 292 ~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~---~~l~~~L~~gi~v~~g~ 345 (400)
T 3vax_A 292 LRSRLLAGLA-STSFQVNGDQDHVVPHILNLSFEDVD----------------------A---EAFLVTLKDLVAVATGS 345 (400)
T ss_dssp HHHHHHHHHT-TTTCEECSCTTSBCTTEEEEECTTCC----------------------H---HHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeCCCC----------------------H---HHHHHHHhcCcEEEecc
Confidence 9999999999 88999875543 357777664321 0 12222222 11223343
Q ss_pred EEEEeee--------E--C---CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 461 VFMTHAI--------V--G---GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 461 ~~~~~~~--------~--~---g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.+..... + . ...++|+++++..++++++++++++|+++.++
T Consensus 346 ~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 346 ASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp EEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred cccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 3322210 0 0 03689999922445677999999999988764
No 39
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.95 E-value=4.9e-26 Score=228.66 Aligned_cols=315 Identities=12% Similarity=0.091 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh-HHHHHHH
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-FQKAAQI 194 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~aa~~ 194 (502)
....++++++++++|.+... ..+++|+|||+|+..++.+++.. ++.+++.+...|.+ +..++..
T Consensus 37 ~~~~~l~~~la~~~g~~~~~-----~~v~~~~g~t~a~~~~~~~~~~~----------gd~vi~~~~~~~~~~~~~~~~~ 101 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGY-----TSVLLQGSGSYAVEAVLGSALGP----------QDKVLIVSNGAYGARMVEMAGL 101 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSE-----EEEEEESCHHHHHHHHHHHSCCT----------TCCEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcC-----cEEEEecChHHHHHHHHHHhcCC----------CCeEEEEeCCCccHHHHHHHHH
Confidence 44556777888888843211 14899999999998888776431 23355566677876 5677888
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144 195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 274 (502)
Q Consensus 195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~ 274 (502)
.|+ +++.+|++. ++.+|+++|+++|++.. .+.+|+++.++|++|.+.|+++|.++|++||+++|+|++|+.
T Consensus 102 ~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~ 172 (366)
T 1m32_A 102 MGI---AHHAYDCGE--VARPDVQAIDAILNADP----TISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSF 172 (366)
T ss_dssp HTC---CEEEEECCT--TSCCCHHHHHHHHHHCT----TCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTT
T ss_pred hCC---ceEEEeCCC--CCCCCHHHHHHHHhcCC----CeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccc
Confidence 999 999999875 46899999999998632 134777888999999999999999999999999999999976
Q ss_pred ccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccCCCcc-cc
Q 037144 275 SACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVGYKDW-QI 352 (502)
Q Consensus 275 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~-~~ 352 (502)
+....+ . .. .++|+++.++||++++|.|+|++++++.. . +.+.. ...|..... .. +..+ ..
T Consensus 173 ~~~~~~-~----~~-~~~di~~~s~~K~~~~~~g~G~~~~~~~~-~-~~~~~~~~~~~~~~~-------~~--~~~~~~~ 235 (366)
T 1m32_A 173 GGIPMD-I----AA-LHIDYLISSANKCIQGVPGFAFVIAREQK-L-AACKGHSRSLSLDLY-------AQ--WRCMEDN 235 (366)
T ss_dssp TTSCCC-T----TT-TTCSEEEEESSSTTCCCSSEEEEEEEHHH-H-TTCTTCCSCSTTCHH-------HH--HHHHHHT
T ss_pred cCcCcc-c----cc-cCccEEEecCcccccCCCceEEEEECHHH-H-HhhcCCCCCccccHH-------HH--Hhhhccc
Confidence 544322 1 11 15899999999999888889999987542 2 22211 111111000 00 0000 00
Q ss_pred cCCCCC--C---chHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCee-EEEEEeecC-cchhh
Q 037144 353 TLCRRF--R---SLKLWVVIRNFGVAN-LRNFIRSHVGMAKLFERLVTSDKRFEVAFP--RNFS-LVCFRVTPS-AVMDK 422 (502)
Q Consensus 353 ~~sr~~--~---al~~~~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~~~~-~v~f~~~~~-~~~~~ 422 (502)
...+++ . ...+..+++.+...| +.++.++..++++++.+.|+++ ++++..+ +..+ +++|.++.. +.
T Consensus 236 ~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--- 311 (366)
T 1m32_A 236 HGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSPEDPQY--- 311 (366)
T ss_dssp TTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCCTTC---
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CCeeccCchhcCceEEEEEcCccCCC---
Confidence 011111 1 124455666555555 7889999999999999999988 7877644 2344 667766420 10
Q ss_pred hhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 423 LRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
...++.+.|.++|..+ .++...+..++|++++. .++++++++++++|+++.++
T Consensus 312 ------------------------~~~~~~~~l~~~gi~v-~~~~~~~~~~iRi~~~~-~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 312 ------------------------RFSEFYRRLKEQGFVI-YPGKVSQSDCFRIGNIG-EVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp ------------------------CHHHHHHHHHHTTEEC-EECCCSSSCEEEEECCS-SCCHHHHHHHHHHHHHHCTT
T ss_pred ------------------------CHHHHHHHHHHCCEEE-ECCcCCCCCEEEEecCC-CCCHHHHHHHHHHHHHHHHh
Confidence 0245677777778643 33333356789999864 46677999999999988765
No 40
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.94 E-value=5.4e-26 Score=230.84 Aligned_cols=335 Identities=9% Similarity=0.050 Sum_probs=228.8
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+......|... ..++++++.+++++.+|.+... ...++|+||++++..++.+...
T Consensus 42 ~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~-----~~i~~~~g~~~a~~~~~~~l~~------- 107 (391)
T 3dzz_A 42 APEIMASMEEKLKVAAFGYESV--PAEYYKAVADWEEIEHRARPKE-----DWCVFASGVVPAISAMVRQFTS------- 107 (391)
T ss_dssp CHHHHHHHHHHHTTCCCCCBCC--CHHHHHHHHHHHHHHHSCCCCG-----GGEEEESCHHHHHHHHHHHHSC-------
T ss_pred CHHHHHHHHHHHhcCcCCCCCC--CHHHHHHHHHHHHHHhCCCCCH-----HHEEECCCHHHHHHHHHHHhCC-------
Confidence 3445566666665444444433 5789999999999999954221 2689999999999888776532
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecC-CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTT-KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~-~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|+++..+|.++..+++..|. +++.+|++ .++++.+|+++|+++|++. .+.+|+++.++|++|.
T Consensus 108 ----~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~i~~p~nptG~ 175 (391)
T 3dzz_A 108 ----PGDQILVQEPVYNMFYSVIEGNGR---RVISSDLIYENSKYSVNWADLEEKLATP-----SVRMMVFCNPHNPIGY 175 (391)
T ss_dssp ----TTCEEEECSSCCHHHHHHHHHTTC---EEEECCCEEETTEEECCHHHHHHHHTST-----TEEEEEEESSBTTTTB
T ss_pred ----CCCeEEECCCCcHHHHHHHHHcCC---EEEEeeeeecCCceeecHHHHHHHHhcc-----CceEEEEECCCCCCCc
Confidence 577899999999999999999999 99999986 2345679999999999631 2447888899999999
Q ss_pred c---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcC-CCCCC--eeEEccCCcCC-CCCcceEEEeeCchhhh
Q 037144 249 V---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDG-VECVD--SFSFNPHKWLF-TTLDCCCLWVKDPSCLL 321 (502)
Q Consensus 249 i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~-~~~aD--si~~~~hK~l~-~p~~~g~~~~r~~~~l~ 321 (502)
+ +++++|+++|++||+++|+|++|+.+............. ....| +++.++||+++ .+..+|+++++++....
T Consensus 176 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~ 255 (391)
T 3dzz_A 176 AWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRA 255 (391)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHH
T ss_pred ccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHH
Confidence 9 889999999999999999999998765432211111111 11245 88899999996 55678888887555432
Q ss_pred hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeE
Q 037144 322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS-DKRFE 400 (502)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~~~~ 400 (502)
.+......... ..........+..++.. +.+.++++.++..++++++.+.|++ +|+++
T Consensus 256 -~~~~~~~~~~~-------------------~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 314 (391)
T 3dzz_A 256 -RAEESFFLAGI-------------------GEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVK 314 (391)
T ss_dssp -HHHHHHHHHTC-------------------SSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred -HHHHHHHhhcc-------------------CCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcE
Confidence 22111000000 00001122233334443 5667888999999999999999998 89999
Q ss_pred EecCCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEE
Q 037144 401 VAFPRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRF 476 (502)
Q Consensus 401 l~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~ 476 (502)
+.. +..+++. +.+...+. ...++.++|. +.|..+.++..+. +..++|+
T Consensus 315 ~~~-~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi 366 (391)
T 3dzz_A 315 VLD-SNASYLAWVDISALGM---------------------------NAEDFCKYLREKTGLIISAGNGYRGNGHEFVRI 366 (391)
T ss_dssp ECC-CCBSSEEEEECGGGCS---------------------------CHHHHHHHHHHHHCEECEESGGGCTTGGGEEEE
T ss_pred Eec-cCceEEEEEehhhcCC---------------------------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEE
Confidence 874 4444444 44432110 0235666664 5686544433332 3579999
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144 477 AAGNSMTMESHVRAAWTVVQEHLEAF 502 (502)
Q Consensus 477 ~~~~~~t~~~di~~~~~~l~~~~~~~ 502 (502)
+++ +++++|+++++.|.++.+++
T Consensus 367 s~~---~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 367 NLA---CPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp ECC---SCHHHHHHHHHHHHHHHHTC
T ss_pred Eec---CCHHHHHHHHHHHHHHHHHh
Confidence 986 47789999999999987753
No 41
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.94 E-value=5.3e-26 Score=230.32 Aligned_cols=353 Identities=13% Similarity=0.057 Sum_probs=226.6
Q ss_pred CcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHH
Q 037144 77 PNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCT 156 (502)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~a 156 (502)
|+.+.+.+++..++..+.+.+...... .+ +|.......+++++++++++..... ....+++|+|||+|+..+
T Consensus 4 ~~~~~~~p~p~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~v~~~~g~t~al~~~ 75 (385)
T 2bkw_A 4 SVDTLLIPGPIILSGAVQKALDVPSLG---HT--SPEFVSIFQRVLKNTRAVFKSAAAS---KSQPFVLAGSGTLGWDIF 75 (385)
T ss_dssp CCCEECSSSSCCCCHHHHHTTSCCCCC---TT--SHHHHHHHHHHHHHHHHHTTCCGGG---TCEEEEEESCTTHHHHHH
T ss_pred ccceeecCCCcCchHHHHHHHhccccc---cC--CHHHHHHHHHHHHHHHHHhCCCCCC---CCceEEEcCchHHHHHHH
Confidence 445666666666555565555544332 12 5555556667888888888764210 012589999999999888
Q ss_pred HHHHHHHHHHHhCccCCCCeEEEeCCC--CchhHHHHHHHcCCCCCCEEEEec-CCCCCcccCHHHHHHHHHHHHhcCCc
Q 037144 157 LTAARDRVLKKIGRENISKLVVYSSDQ--THCAFQKAAQIVGIDRKNIRAIKT-TKSSSYGLSAESVLSQINLDVEAELI 233 (502)
Q Consensus 157 l~~a~~~~~~~~~~~~~~~~~v~~s~~--~H~s~~~aa~~~Glg~~~v~~v~~-~~~~~~~~d~~~Le~~i~~~~~~g~~ 233 (502)
+.+.... ..+++.|++... .|.++.++++..|+ +++.+|+ +. ++.+|+++|+++|++. .
T Consensus 76 ~~~~~~~--------~~~gd~vlv~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~~d~~~l~~~l~~~-----~ 137 (385)
T 2bkw_A 76 ASNFILS--------KAPNKNVLVVSTGTFSDRFADCLRSYGA---QVDVVRPLKI--GESVPLELITEKLSQN-----S 137 (385)
T ss_dssp HHHHSCT--------TCSCCEEEEECSSHHHHHHHHHHHHTTC---EEEEECCSST--TSCCCHHHHHHHHHHS-----C
T ss_pred HHHHhcc--------CCCCCeEEEEcCCcchHHHHHHHHHcCC---ceEEEecCCC--CCCCCHHHHHHHHhcC-----C
Confidence 8766310 004555555433 34455577888899 9999998 64 5689999999999761 1
Q ss_pred cEEEEEecCCccccccCChhHHHHHHHHh--CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceE
Q 037144 234 PLFLCATVGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCC 311 (502)
Q Consensus 234 p~~Vv~t~gtt~~G~idpl~eI~~i~~~~--g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~ 311 (502)
+.+|+++.++|++|.+.|+++|+++|++| |+++|+|++|+.+....+ . ... ++|++++++|||+++|.|+|+
T Consensus 138 ~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~-~----~~~-~~d~~~~s~~K~~~~~~G~G~ 211 (385)
T 2bkw_A 138 YGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFE-F----DEW-GVDFALTASQKAIGAPAGLSI 211 (385)
T ss_dssp CSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCC-T----TTT-TCSEEEEESSSTTCCCSCEEE
T ss_pred CCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcccc-c----ccc-CceEEEecCccccccCCcceE
Confidence 33788899999999999999999999999 999999999976544322 1 111 589999999999998888999
Q ss_pred EEeeCchhhhhhhc-----CCcccccCccCCCCCcccccCCCccccc-----CCCC-CCchHHHHHHHHhcHHHHHHHHH
Q 037144 312 LWVKDPSCLLSTLS-----TNPQYLKNEATDQEPKEQEVGYKDWQIT-----LCRR-FRSLKLWVVIRNFGVANLRNFIR 380 (502)
Q Consensus 312 ~~~r~~~~l~~~~~-----~~~~yl~~~~~~~~~~~~~~~~~~~~~~-----~sr~-~~al~~~~~l~~~g~~g~~~~~~ 380 (502)
++++++. +...+. ....|....... . .. ...+... ++.. .....+..+++.+...++.++.+
T Consensus 212 ~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~---~-~~--~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 284 (385)
T 2bkw_A 212 SLCSSRF-MDYALNDSKNGHVHGYFSSLRRW---T-PI--MENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWD 284 (385)
T ss_dssp EEECHHH-HHHHTCHHHHCCCSCSTTCHHHH---H-HH--HHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred EEEcHHH-HHHHHhhccCCCCCceeecHHHH---h-hH--HHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHH
Confidence 8886543 220111 001111000000 0 00 0000000 0111 11234445566554556888899
Q ss_pred HHHHHHHHHHHHH-hcCCCeEEecCC-----CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHH
Q 037144 381 SHVGMAKLFERLV-TSDKRFEVAFPR-----NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLES 454 (502)
Q Consensus 381 ~~~~la~~l~~~l-~~~~~~~l~~~~-----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 454 (502)
+..++++++.+.| +++ +++++.+. ..++++|.+.. ..++.++
T Consensus 285 ~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~ 332 (385)
T 2bkw_A 285 LHREMSDWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYVAD-------------------------------PPDVIAF 332 (385)
T ss_dssp HHHHHHHHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEECSC-------------------------------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc-CceecccCcccccCCceEEEecCC-------------------------------HHHHHHH
Confidence 9999999999999 888 88887421 35667776531 2356667
Q ss_pred HHhcCcEEEEeeeE--CCEEEEEEE-ecC--CCCcHHHHHHHHHHHHHHHHh
Q 037144 455 INVSGKVFMTHAIV--GGIYVLRFA-AGN--SMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 455 l~~~g~~~~~~~~~--~g~~~lR~~-~~~--~~t~~~di~~~~~~l~~~~~~ 501 (502)
|.++|.. +.+... .+..++|++ +.. +.++++|++++++.|+++.++
T Consensus 333 l~~~gi~-v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 333 LKSHGVV-IAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp HHHTTEE-CBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred HHHCCeE-EeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 7667754 333221 135689999 541 235677999999999988764
No 42
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.94 E-value=4.9e-26 Score=232.56 Aligned_cols=343 Identities=11% Similarity=0.049 Sum_probs=223.0
Q ss_pred CcccccCCCCCCHHHHHHHHHHhhcCC----CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHH
Q 037144 77 PNYFAYFPATSSVAGIVGEMLSSGFNV----VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEA 152 (502)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~~~~n~----~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a 152 (502)
..|+++..+++.++.+ .+.+...+.. ....|..++.......++.+++++++|.+.. .+++|+|+|++
T Consensus 27 ~~~ld~~~~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a 98 (406)
T 3cai_A 27 WVHFDAPAGMLIPDSV-ATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPG-------GVVLGADRAVL 98 (406)
T ss_dssp CEECBGGGCCCCCHHH-HHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESCHHHH
T ss_pred eEEEeCCCcCCCCHHH-HHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCChHHH
Confidence 3567766555444444 3444433321 1223433444566777889999999998654 58999999998
Q ss_pred HHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH----cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH
Q 037144 153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI----VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV 228 (502)
Q Consensus 153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~----~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~ 228 (502)
+..++.+.... . .+++.|+++..+|.++...... .|. +++.+|++++ ++.+|+++|+++|+++
T Consensus 99 l~~~~~~l~~~-~-------~~gd~vi~~~~~~~~~~~~~~~~~~~~g~---~v~~v~~~~~-~~~~d~~~l~~~l~~~- 165 (406)
T 3cai_A 99 LSLLAEASSSR-A-------GLGYEVIVSRLDDEANIAPWLRAAHRYGA---KVKWAEVDIE-TGELPTWQWESLISKS- 165 (406)
T ss_dssp HHHHHHHTGGG-G-------BTTCEEEEETTSCGGGTHHHHHHHHHHBC---EEEEECCCTT-TCCCCGGGHHHHCCTT-
T ss_pred HHHHHHHHhhc-c-------CCCCEEEEcCCccHHHHHHHHHHHHhcCC---eEEEEecCcc-cCCcCHHHHHHHhCCC-
Confidence 87665543100 0 0567888899999886555443 698 9999998732 4689999999998643
Q ss_pred hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc
Q 037144 229 EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD 308 (502)
Q Consensus 229 ~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~ 308 (502)
+.+|+++.++|++|.+.|+++|.++|+++|+++|+|++|+.+....+ .... ++|+++.++||+++ |.
T Consensus 166 -----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~~-----~~d~~~~s~~K~~g-~~- 232 (406)
T 3cai_A 166 -----TRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLD-IRET-----DADVVTVNAHAWGG-PP- 232 (406)
T ss_dssp -----EEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCC-HHHH-----CCSEEEEEGGGGTS-CS-
T ss_pred -----ceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCC-chhc-----CCCEEEeehhhhcC-CC-
Confidence 45888999999999999999999999999999999999986554332 2221 58999999999875 65
Q ss_pred ce-EEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCC-CCCCc-hHHHHHHHHhcHH------------
Q 037144 309 CC-CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLC-RRFRS-LKLWVVIRNFGVA------------ 373 (502)
Q Consensus 309 ~g-~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~s-r~~~a-l~~~~~l~~~g~~------------ 373 (502)
+| ++++++ .... .+.....+.... ....+..+ ....+ ..+..+++.+...
T Consensus 233 ~G~~~~~~~-~~~~-~l~~~~~~~~~~-------------~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~ 297 (406)
T 3cai_A 233 IGAMVFRDP-SVMN-SFGSVSTNPYAT-------------GPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERL 297 (406)
T ss_dssp CEEEEESCH-HHHH-TSCCCCSCTTCC-------------GGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHH
T ss_pred cCeEEEEeh-HHHh-hcCCcccCCCCC-------------ccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhh
Confidence 78 777654 3222 221111011000 00011111 11111 1233344443221
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHH
Q 037144 374 --NLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR--NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNR 449 (502)
Q Consensus 374 --g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (502)
+++++.++..++++++.+.|+++|++++..+. ..++++|.+.... ..
T Consensus 298 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~ 348 (406)
T 3cai_A 298 AVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHKVP-----------------------------AD 348 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEETTBC-----------------------------HH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEECCcC-----------------------------HH
Confidence 47888899999999999999999899887543 3567777764211 23
Q ss_pred HHHHHHHhcCcEEEEee------eE---CCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 450 ELLESINVSGKVFMTHA------IV---GGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 450 ~l~~~l~~~g~~~~~~~------~~---~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
++.+.|.+.|..+..+. .+ .+..++|+++. ..++++|+++++++|+++
T Consensus 349 ~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~-~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 349 RVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLA-HYSTMAEVDQLVRALASL 405 (406)
T ss_dssp HHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECC-TTCCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEee-cCCCHHHHHHHHHHHHHh
Confidence 56666767776443322 01 12468999986 446778999999999764
No 43
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.94 E-value=6e-26 Score=230.32 Aligned_cols=315 Identities=14% Similarity=0.131 Sum_probs=215.1
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH----
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK---- 190 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~---- 190 (502)
.....++.+.+++++|.+.+ .+++|+|||+|+..++.+.+-. +++.|+++..+|.+...
T Consensus 58 ~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a~~~~~~~~~~~----------~gd~vl~~~~~~~~~~~~~~~ 120 (390)
T 1elu_A 58 QQLIAQLRQALAETFNVDPN-------TITITDNVTTGCDIVLWGLDWH----------QGDEILLTDCEHPGIIAIVQA 120 (390)
T ss_dssp HHHHHHHHHHHHHHTTSCGG-------GEEEESSHHHHHHHHHHHSCCC----------TTCEEEEETTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHH-------HEEEeCChHHHHHHHHhCCCCC----------CCCEEEEecCcccHHHHHHHH
Confidence 45566788889999998654 5899999999998887766211 56788889999988654
Q ss_pred HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHH----HhCCEE
Q 037144 191 AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAK----QFGIWV 266 (502)
Q Consensus 191 aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~----~~g~~l 266 (502)
.++..|. +++.+|++...++.+|+++|+++|+++ +.+|+++.++|++|.+.|+++|.++|+ +||+++
T Consensus 121 ~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~l 191 (390)
T 1elu_A 121 IAARFGI---TYRFFPVAATLNQGDAAAVLANHLGPK------TRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRV 191 (390)
T ss_dssp HHHHHCC---EEEEECCGGGSSSSCHHHHHHTTCCTT------EEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEE
T ss_pred HHHHhCc---EEEEEcCCCCCCccchHHHHHHhcCCC------ceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEE
Confidence 4677899 999999863235789999999988643 457888999999999999999999999 999999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCC-cccccCccCCCCCccccc
Q 037144 267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTN-PQYLKNEATDQEPKEQEV 345 (502)
Q Consensus 267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~ 345 (502)
++|++|+.+....+ . .. ...|+++.++|||+++|.++|++++++.. .. .+... ..+....... ....+
T Consensus 192 i~Dea~~~g~~~~~-~----~~-~~~d~~~~s~~K~~~~~~g~G~~~~~~~~-~~-~~~~~~~g~~~~~~~~---~~~~~ 260 (390)
T 1elu_A 192 LVDGAQSAGSLPLD-F----SR-LEVDYYAFTGHKWFAGPAGVGGLYIHGDC-LG-EINPTYVGWRSITYGA---KGEPT 260 (390)
T ss_dssp EEECTTTBTTBCCC-T----TT-SCCSEEEEESSSTTCCCTTCEEEEECTTT-GG-GCCCCSCCTTTEEECT---TSCEE
T ss_pred EEEcccccCCcCCC-h----hh-cCCCEEEccccccccCCCceEEEEECHHh-Hh-hcCCccccCCcccccc---cCccc
Confidence 99999976543321 1 11 26899999999999999999999987542 22 22110 0000000000 00000
Q ss_pred CCCc--ccccCCCC--CCchHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEEEEeecCc
Q 037144 346 GYKD--WQITLCRR--FRSLKLWVVIRNFGVAN-LRNFIRSHVGMAKLFERLVTSDKRFEVAFP--RNFSLVCFRVTPSA 418 (502)
Q Consensus 346 ~~~~--~~~~~sr~--~~al~~~~~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~~~~~v~f~~~~~~ 418 (502)
++.+ ..+..+.. .....+..+++.+...+ ++++.++..++++++.+.|+++++++++.+ +..++++|.+.+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~- 339 (390)
T 1elu_A 261 GWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSP- 339 (390)
T ss_dssp EECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSS-
T ss_pred ccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcCCC-
Confidence 0000 01111111 11234445666654445 888999999999999999999889998753 3567888866421
Q ss_pred chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
. + ..++.++|.++|..+..+. +..++|+++. ..++++++++++++|+++
T Consensus 340 ~-------------------------~--~~~~~~~l~~~gi~v~~~~---~~~~iRis~~-~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 340 L-------------------------G--HRAIVQKLEEQRIYLRTIA---DPDCIRACCH-YITDEEEINHLLARLADF 388 (390)
T ss_dssp S-------------------------C--HHHHHHHHHHTTEECEEET---TTTEEEEECC-TTCCHHHHHHHHHHHTTC
T ss_pred C-------------------------C--HHHHHHHHHHCCEEEEecC---CCCeEEEecc-cCCCHHHHHHHHHHHHhh
Confidence 1 0 2356677777786543332 3468999984 456778999999998764
No 44
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.94 E-value=2.5e-25 Score=223.05 Aligned_cols=333 Identities=12% Similarity=0.088 Sum_probs=221.8
Q ss_pred ccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHH
Q 037144 79 YFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLT 158 (502)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~ 158 (502)
||+....++ ++..+.+.+...+.. |..+.+..++++++.+++++++|.+.+ .+++|+|||+|+..++.
T Consensus 17 ~l~~~~~~~-~~~~v~~a~~~~~~~----~~~~~g~~~~~~~~~~~l~~~~g~~~~-------~v~~~~g~t~a~~~~~~ 84 (359)
T 1svv_A 17 SFVNDYSVG-MHPKILDLMARDNMT----QHAGYGQDSHCAKAARLIGELLERPDA-------DVHFISGGTQTNLIACS 84 (359)
T ss_dssp ECSCSCSSC-CCHHHHHHHHHHTTC----CCCSTTCSHHHHHHHHHHHHHHTCTTS-------EEEEESCHHHHHHHHHH
T ss_pred EecCCCcCC-CCHHHHHHHHHHHhh----ccccccccHHHHHHHHHHHHHhCCCCc-------cEEEeCCchHHHHHHHH
Confidence 454433333 344455666665543 333345567888999999999997654 58999999999998888
Q ss_pred HHHHHHHHHhCccCCCCeEEEeCCCCchhHHH--HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH-hcCCccE
Q 037144 159 AARDRVLKKIGRENISKLVVYSSDQTHCAFQK--AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV-EAELIPL 235 (502)
Q Consensus 159 ~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~--aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~-~~g~~p~ 235 (502)
+++. +++.|+++..+|+++.. .++..|+ +++.+|.+ ++.+|+++|++++++.. +.+..+.
T Consensus 85 ~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~ 147 (359)
T 1svv_A 85 LALR-----------PWEAVIATQLGHISTHETGAIEATGH---KVVTAPCP---DGKLRVADIESALHENRSEHMVIPK 147 (359)
T ss_dssp HHCC-----------TTEEEEEETTSHHHHSSTTHHHHTTC---CEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEE
T ss_pred HHhC-----------CCCEEEEcccchHHHHHHHHHhcCCC---eeEEEeCC---CCeecHHHHHHHHHHHHhccCCCce
Confidence 7753 57789999999999888 4788899 99999985 46899999999998641 2233456
Q ss_pred EEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC-CCCCeeEEccCCcCCCCCcceE
Q 037144 236 FLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV-ECVDSFSFNPHKWLFTTLDCCC 311 (502)
Q Consensus 236 ~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~-~~aDsi~~~~hK~l~~p~~~g~ 311 (502)
+|+++.+ |++|.+.| +++|.++|++||+|+|+|++|.++.+.........-++ ..+|++++++||++ .|.++|+
T Consensus 148 ~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g-~~~~~g~ 225 (359)
T 1svv_A 148 LVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAG-GMFGEAL 225 (359)
T ss_dssp EEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTT-CSSCEEE
T ss_pred EEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCC-CCCceEE
Confidence 7888877 68999988 99999999999999999999954322111110000000 26899999999985 5778888
Q ss_pred EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 037144 312 LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFER 391 (502)
Q Consensus 312 ~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~ 391 (502)
+++++. ... .+. .+..... .....+. ..... ....+..+++.++.++..++++++.+
T Consensus 226 l~~~~~-~~~-~~~---~~~~~~~--------------~~~~~~~--~~~~~--~~~~l~~~~~~~~~~~~~~~~~~l~~ 282 (359)
T 1svv_A 226 IILNDA-LKP-NAR---HLIKQRG--------------ALMAKGW--LLGIQ--FEVLMKDNLFFELGAHSNKMAAILKA 282 (359)
T ss_dssp EECSGG-GCT-THH---HHHHHTT--------------CCCTTTH--HHHHH--HHHHTSTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEccc-HHH-HHH---HHHhcCC--------------cccccch--hhHHH--HHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 887543 211 111 0100000 0000000 01111 12234456678889999999999999
Q ss_pred HHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeECC
Q 037144 392 LVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVGG 470 (502)
Q Consensus 392 ~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g 470 (502)
.| +.+++++..+...+++++.+. .++.+++.++ |..+.. ....+
T Consensus 283 ~L-~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~l~~~~gi~v~~-~~~~~ 327 (359)
T 1svv_A 283 GL-EACGIRLAWPSASNQLFPILE---------------------------------NTMIAELNNDFDMYTVE-PLKDG 327 (359)
T ss_dssp HH-HHTTCCBSSCCSSSEECBEEE---------------------------------HHHHHHHTTTEECEEEE-EETTT
T ss_pred Hh-ccCCeEEccCCccceEEEEcC---------------------------------HHHHHHHHHhcCEEEEe-cccCC
Confidence 99 567888775555555544331 2567778888 875522 11235
Q ss_pred EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 471 IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 471 ~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..++|++++ ..+++++++++++.|+++.++
T Consensus 328 ~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~ 357 (359)
T 1svv_A 328 TCIMRLCTS-WATEEKECHRFVEVLKRLVAS 357 (359)
T ss_dssp EEEEEEECC-TTCCHHHHHHHHHHHHHC---
T ss_pred CceEEEEcc-CcCCHHHHHHHHHHHHHHHhc
Confidence 789999964 556788999999999987654
No 45
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.94 E-value=1.9e-26 Score=232.57 Aligned_cols=302 Identities=14% Similarity=0.098 Sum_probs=211.1
Q ss_pred HHHHHHHHHH-HHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144 115 VELENIVMDW-LGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ 193 (502)
Q Consensus 115 ~~le~~~~~~-l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~ 193 (502)
.....++.++ +++++|.+ . +++|+|||+|+..++.++.. +++.|+++..+|+++..+++
T Consensus 52 ~~~~~~l~~~~la~~~~~~-~--------v~~~~g~t~a~~~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~ 111 (371)
T 2e7j_A 52 TPPIHDFIHNQLPKFLGCD-V--------ARVTNGAREAKFAVMHSLAK-----------KDAWVVMDENCHYSSYVAAE 111 (371)
T ss_dssp -CCHHHHHHTHHHHHTTSS-E--------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCC-E--------EEEeCChHHHHHHHHHHHhC-----------CCCEEEEccCcchHHHHHHH
Confidence 3455667788 89999876 2 79999999999888877642 57789999999999999999
Q ss_pred HcCCCCCCEEEEe--cCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecc
Q 037144 194 IVGIDRKNIRAIK--TTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 271 (502)
Q Consensus 194 ~~Glg~~~v~~v~--~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA 271 (502)
..|+ +++.+| +++ ++.+|+++|++++++...+ ..+.+|+++.++|++|.+.|+++|.++|++||+++++|++
T Consensus 112 ~~g~---~~~~v~~~~~~--~~~~d~~~l~~~l~~~~~~-~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a 185 (371)
T 2e7j_A 112 RAGL---NIALVPKTDYP--DYAITPENFAQTIEETKKR-GEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGA 185 (371)
T ss_dssp HTTC---EEEEECCCCTT--TCCCCHHHHHHHHHHHTTT-SCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECT
T ss_pred HcCC---eEEEeecccCC--CCCcCHHHHHHHHHhhccc-CCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECc
Confidence 9999 999999 764 4799999999999754321 2356899999999999999999999999999999999999
Q ss_pred cccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCc-ccccCccCCCCCcccccCCCcc
Q 037144 272 YAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNP-QYLKNEATDQEPKEQEVGYKDW 350 (502)
Q Consensus 272 ~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~ 350 (502)
|+.+....+ .... ++|+++.++||++++|.++|++++++.. ....+.... .+... .
T Consensus 186 ~~~~~~~~~-~~~~-----~~di~~~s~sK~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~----------------~ 242 (371)
T 2e7j_A 186 YAIGRMPVS-LKEI-----GADFIVGSGHKSMAASGPIGVMGMKEEW-AEIVLRRSEKYKNKE----------------V 242 (371)
T ss_dssp TTBTTBCCC-HHHH-----TCSEEEEEHHHHSSCCSSCEEEEECTTT-TTTTTCBCSSCTTSB----------------G
T ss_pred cccCCCCCC-hhhc-----CCCEEEecCCcCCCCCCCcEEEEEechh-hhhhccccccCcccc----------------c
Confidence 988765322 1211 5789999999999988899999987642 111011110 01100 0
Q ss_pred cccC-CCCCC-chHHHHHHHHhcHHHHHHHHHHH--HHHHHHHHHHHhcCCCeEEecCC--CeeEEEEEeecCcchhhhh
Q 037144 351 QITL-CRRFR-SLKLWVVIRNFGVANLRNFIRSH--VGMAKLFERLVTSDKRFEVAFPR--NFSLVCFRVTPSAVMDKLR 424 (502)
Q Consensus 351 ~~~~-sr~~~-al~~~~~l~~~g~~g~~~~~~~~--~~la~~l~~~l~~~~~~~l~~~~--~~~~v~f~~~~~~~~~~~~ 424 (502)
.+.. +.... ...+..+++.+.. ++.++. .++++++.+.|+++ ++++..++ ..+++++.+. .
T Consensus 243 ~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~-~------- 309 (371)
T 2e7j_A 243 ELLGCTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE-V------- 309 (371)
T ss_dssp GGTTCCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH-H-------
T ss_pred ccccCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC-C-------
Confidence 0001 11111 1222334443322 566677 88999999999988 89987553 4667777653 1
Q ss_pred hcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE-C---C--EEEEE-EEecCCCCcHHHHHHHHHHHHH
Q 037144 425 TKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV-G---G--IYVLR-FAAGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~---g--~~~lR-~~~~~~~t~~~di~~~~~~l~~ 497 (502)
..++.+.|.+.|..+.+ ... . + ..++| +++....++++++++++++|++
T Consensus 310 -----------------------~~~~~~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~ 365 (371)
T 2e7j_A 310 -----------------------LYEISKKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKE 365 (371)
T ss_dssp -----------------------HHHHHHHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHH
T ss_pred -----------------------HHHHHHHHHHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHH
Confidence 23455666666653322 110 0 1 46799 9987442577799999999999
Q ss_pred HHHhC
Q 037144 498 HLEAF 502 (502)
Q Consensus 498 ~~~~~ 502 (502)
+.+++
T Consensus 366 ~~~~~ 370 (371)
T 2e7j_A 366 IIEKY 370 (371)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 87754
No 46
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.94 E-value=5.1e-26 Score=227.90 Aligned_cols=300 Identities=15% Similarity=0.098 Sum_probs=205.5
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH--H
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA--A 192 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a--a 192 (502)
..++.++.+|+++++| ++. .+++|+|||+|+..++.+++. +++.|+++...|++...+ +
T Consensus 42 ~~~~~~l~~~la~~~g-~~~-------~v~~~~~gt~a~~~al~~~~~-----------~gd~vi~~~~~~~~~~~~~~~ 102 (356)
T 1v72_A 42 DELTAQVKRKFCEIFE-RDV-------EVFLVPTGTAANALCLSAMTP-----------PWGNIYCHPASHINNDECGAP 102 (356)
T ss_dssp SHHHHHHHHHHHHHHT-SCC-------EEEEESCHHHHHHHHHHTSCC-----------TTEEEEECTTSHHHHSSTTHH
T ss_pred chHHHHHHHHHHHHhC-CCC-------cEEEeCCccHHHHHHHHHhcC-----------CCCEEEEcCccchhhhhchHH
Confidence 4567778899999999 432 479999999999888877643 678899999999988776 7
Q ss_pred HHc--CCCCCCEEEEecCCCCCcccCHHHHHH-HHHHHH-hcCCccEEEEEecCCccccc---cCChhHHHHHHHHhCCE
Q 037144 193 QIV--GIDRKNIRAIKTTKSSSYGLSAESVLS-QINLDV-EAELIPLFLCATVGTTAITA---VDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 193 ~~~--Glg~~~v~~v~~~~~~~~~~d~~~Le~-~i~~~~-~~g~~p~~Vv~t~gtt~~G~---idpl~eI~~i~~~~g~~ 265 (502)
..+ |. +++.+|.+ ++.+|+++|++ ++++.. ..+.++.+|+++.++ ++|. .+++++|+++|++||+|
T Consensus 103 ~~~~~g~---~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~-~tG~~~~~~~l~~i~~~~~~~~~~ 175 (356)
T 1v72_A 103 EFFSNGA---KLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQAT-EVGSIYTLDEIEAIGDVCKSSSLG 175 (356)
T ss_dssp HHHTTSC---EEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSC-TTSCCCCHHHHHHHHHHHHHTTCE
T ss_pred HHHhCCc---EEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCC-CCCccCCHHHHHHHHHHHHHcCCe
Confidence 777 88 89888875 46899999999 886421 122246678888876 4999 67899999999999999
Q ss_pred EEeecccccccccCccchhhhcCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE 344 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 344 (502)
+|+|++|+.+............++ ..+|++++++||+ +.|.|+|+++. ++..... +. ++.... +.
T Consensus 176 li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~-~~~~~~~-~~----~~~~~~-------~~ 241 (356)
T 1v72_A 176 LHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLF-NTSLATE-MS----YRRKRA-------GH 241 (356)
T ss_dssp EEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEES-SGGGHHH-HH----HHHHHT-------TC
T ss_pred EEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEE-CHHHHhh-HH----HHhhcc-------Cc
Confidence 999999975432111111111111 2689999999999 66877778876 3433221 11 110000 00
Q ss_pred cCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhh
Q 037144 345 VGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLR 424 (502)
Q Consensus 345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~ 424 (502)
. ..........+++.+..+.+.++.++..++++++.+.|++++++++..++..+++++.+.
T Consensus 242 -------~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~--------- 302 (356)
T 1v72_A 242 -------L---SSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD--------- 302 (356)
T ss_dssp -------C---CSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC---------
T ss_pred -------h---hhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC---------
Confidence 0 000112233345555445566778888999999999999988999876666666666542
Q ss_pred hcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 425 TKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
. ++.++|.++|..+.++. +. ..++|+++ +..+++++++++++.|+++.+
T Consensus 303 --------------------~----~~~~~l~~~gi~v~~g~-~~-~~~iRi~~-~~~~~~~~i~~~~~~l~~~l~ 351 (356)
T 1v72_A 303 --------------------S----AMIDALLKAGFGFYHDR-WG-PNVVRFVT-SFATTAEDVDHLLNQVRLAAD 351 (356)
T ss_dssp --------------------H----HHHHHHHHTTCBCBCSS-SS-TTEEEEEC-CTTCCHHHHHHHHHHHHHTC-
T ss_pred --------------------H----HHHHHHHhcCeEEeccc-cC-CCeEEEEe-cCCCCHHHHHHHHHHHHHHHH
Confidence 1 45666667786543322 32 56899996 456778899999999988754
No 47
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.94 E-value=1.2e-25 Score=228.45 Aligned_cols=330 Identities=10% Similarity=0.062 Sum_probs=224.7
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (502)
..+.+.+...++.....|...++..++++.+.+|+.+.+|++... ...++|+||++|+..++.+...
T Consensus 46 ~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~-------- 112 (388)
T 1j32_A 46 KHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGA-----DNILVTNGGKQSIFNLMLAMIE-------- 112 (388)
T ss_dssp HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEcCCHHHHHHHHHHHhcC--------
Confidence 445555555553333456555667899999999999999874221 2689999999999888776643
Q ss_pred cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-
Q 037144 171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV- 249 (502)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i- 249 (502)
+++.|+++..+|.++..+++..|+ +++.+|+++++++.+|+++|+++++++ +.+|+++.++|++|.+
T Consensus 113 ---~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~ 180 (388)
T 1j32_A 113 ---PGDEVIIPAPFWVSYPEMVKLAEG---TPVILPTTVETQFKVSPEQIRQAITPK------TKLLVFNTPSNPTGMVY 180 (388)
T ss_dssp ---TTCEEEEESSCCTHHHHHHHHTTC---EEEEECCCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCC
T ss_pred ---CCCEEEEcCCCChhHHHHHHHcCC---EEEEecCCcccCCCCCHHHHHHhcCcC------ceEEEEeCCCCCCCcCC
Confidence 567888999999999999999999 999999875335789999999998643 3477888899999998
Q ss_pred --CChhHHHHHHHHhCCEEEeecccccccccCcc---chhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhh
Q 037144 250 --DPLKPLCDVAKQFGIWVHVDAAYAGSACICPE---FRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLST 323 (502)
Q Consensus 250 --dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~---~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~ 323 (502)
+++++|+++|++||+++++|++|+.+.+.... .........+.|.++.++||+++.| ..+|+++.++. .. +.
T Consensus 181 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~-~~-~~ 258 (388)
T 1j32_A 181 TPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVP-LV-KA 258 (388)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHH-HH-HH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHH-HH-HH
Confidence 45999999999999999999999876542211 1111000125788999999999644 34888887543 22 22
Q ss_pred hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
+.....+.. + ....+..+++...+ +.+.++++.++..++++++.+.|+++|++++
T Consensus 259 l~~~~~~~~-----------------~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 315 (388)
T 1j32_A 259 ATKIQGHST-----------------S------NVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLEC 315 (388)
T ss_dssp HHHHHHTTT-----------------C------SCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBC
T ss_pred HHHHHhhcc-----------------c------CCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcc
Confidence 211000000 0 01233334333333 4567888899999999999999999888887
Q ss_pred ecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeECCEEEEEEEec
Q 037144 402 AFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVGGIYVLRFAAG 479 (502)
Q Consensus 402 ~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lR~~~~ 479 (502)
.. +..+++++ .+...+. ...++.+.+.+ .|..+.++..+....++|+++.
T Consensus 316 ~~-~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~ 367 (388)
T 1j32_A 316 PK-PDGAFYMFPSIAKTGR---------------------------SSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA 367 (388)
T ss_dssp CC-CCBTTEECCBCGGGTC---------------------------CHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC
T ss_pred cC-CCeeEEEEEecCCCCC---------------------------CHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec
Confidence 64 44444433 2221000 02356666665 5865444333333468999985
Q ss_pred CCCCcHHHHHHHHHHHHHHHHh
Q 037144 480 NSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 480 ~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+++++|+++++.|+++.++
T Consensus 368 ---~~~~~i~~~~~~l~~~l~~ 386 (388)
T 1j32_A 368 ---TDLDTIKRGMERLEKFLHG 386 (388)
T ss_dssp ---SCHHHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHHHHHH
Confidence 4788999999999988764
No 48
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.94 E-value=2.1e-24 Score=222.26 Aligned_cols=298 Identities=14% Similarity=0.060 Sum_probs=206.1
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
.....++.+++++++|.+ ..+++++|++||..++.+... ++++|+++...|.++..+++.
T Consensus 108 ~~~~~~l~~~la~~~g~~---------~~i~~~sGs~a~~~al~~l~~-----------~gd~vl~~~~~h~~~~~~~~~ 167 (427)
T 2w8t_A 108 FHDHMEVEQALRDFYGTT---------GAIVFSTGYMANLGIISTLAG-----------KGEYVILDADSHASIYDGCQQ 167 (427)
T ss_dssp CHHHHHHHHHHHHHHTCS---------EEEEESCHHHHHHHHHHHHSC-----------TTCEEEEETTCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCC---------ceEEecCcHHHHHHHHHHhcC-----------CCCEEEECCcccHHHHHHHHH
Confidence 355666778888888875 257778888999877766432 567888999999999999999
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144 195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 274 (502)
Q Consensus 195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~ 274 (502)
.|. +++.+| .+|+++|+++|++... ..+.+|+++.+.+++|.+.|+++|.++|++||+++++|++|++
T Consensus 168 ~g~---~~~~~~-------~~d~~~le~~l~~~~~--~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~ 235 (427)
T 2w8t_A 168 GNA---EIVRFR-------HNSVEDLDKRLGRLPK--EPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSM 235 (427)
T ss_dssp SCS---EEEEEC-------TTCHHHHHHHHHTSCS--SSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTT
T ss_pred cCC---eeEEeC-------CCCHHHHHHHHHhccC--CCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccc
Confidence 998 888776 3589999999975311 1356888888899999999999999999999999999999988
Q ss_pred ccccCccchhhh--cCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccCCCcc
Q 037144 275 SACICPEFRHFI--DGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVGYKDW 350 (502)
Q Consensus 275 ~~~~~~~~~~~~--~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~ 350 (502)
+.+.- ..+... .++ .++|+++.++||+++.| + |+++.++ ... +.+.. ...|...
T Consensus 236 ~~~~~-~g~~~~~~~~~~~~~di~~~s~sK~~g~~-g-G~v~~~~-~l~-~~l~~~~~~~~~~----------------- 293 (427)
T 2w8t_A 236 GFFGP-NGRGVYEAQGLEGQIDFVVGTFSKSVGTV-G-GFVVSNH-PKF-EAVRLACRPYIFT----------------- 293 (427)
T ss_dssp TTSST-TSCCHHHHTTCTTCCSEEEEESSSTTCSC-C-EEEEECC-TTG-GGGGGTCHHHHSS-----------------
T ss_pred cccCC-CCCchHhhcCCCcCCcEEEecchhhhccC-C-CEEEeCH-HHH-HHHHHhccccccc-----------------
Confidence 76531 111111 122 36799999999999743 4 7777653 332 22221 1122211
Q ss_pred cccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-CeeEEEEEeecCcchhhhhhccc
Q 037144 351 QITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-NFSLVCFRVTPSAVMDKLRTKYK 428 (502)
Q Consensus 351 ~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-~~~~v~f~~~~~~~~~~~~~~~~ 428 (502)
++.. .....+..+++.+. .+.++.++..++++++.+.|+++ ++++..++ ..+++++.+..
T Consensus 294 ---~~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~------------ 355 (427)
T 2w8t_A 294 ---ASLPPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSAIVAVMLED------------ 355 (427)
T ss_dssp ---CCCCHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSSEEEEEESS------------
T ss_pred ---CCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCCEEEEEECC------------
Confidence 1111 11122234444432 24678888999999999999988 88887455 66777777642
Q ss_pred CCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee---ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 429 NGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI---VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.....++.+.|.++|..+..... ..+..++|++++. .+++++|++++++|+++.++
T Consensus 356 ----------------~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~-~~t~e~i~~~~~~l~~~l~~ 414 (427)
T 2w8t_A 356 ----------------QEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICA-EHTPAQIQTVLGMFQAAGRA 414 (427)
T ss_dssp ----------------HHHHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCT-TCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------HHHHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCC-CCCHHHHHHHHHHHHHHHHH
Confidence 12245677888888864433321 1235799999864 45677999999999988654
No 49
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.93 E-value=6.3e-25 Score=224.60 Aligned_cols=327 Identities=10% Similarity=0.066 Sum_probs=222.1
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (502)
..+.+.+...+......|...++..++++.+.+|+.+.+|++... ..+++|+||++|+..++.+...
T Consensus 57 ~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~-----~~v~~t~g~~~al~~~~~~l~~-------- 123 (406)
T 1xi9_A 57 EHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITP-----DDVRVTAAVTEALQLIFGALLD-------- 123 (406)
T ss_dssp HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCH-----HHEEEcCChHHHHHHHHHHhCC--------
Confidence 334455544443332345555567899999999999988864321 2689999999999888776532
Q ss_pred cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
+++.|+++..+|.++..+++..|+ +++.+|+++++++.+|+++|+++++++ +.+|+++.++|++|.+-
T Consensus 124 ---~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~ 191 (406)
T 1xi9_A 124 ---PGDEILVPGPSYPPYTGLVKFYGG---KPVEYRTIEEEDWQPDIDDIRKKITDR------TKAIAVINPNNPTGALY 191 (406)
T ss_dssp ---TTCEEEEEESCCHHHHHHHHHTTC---EEEEEEEEGGGTSEECHHHHHHHCCTT------EEEEEEESSCTTTCCCC
T ss_pred ---CCCEEEEcCCCCccHHHHHHHcCC---EEEEeecCCCcCCcCCHHHHHHhhCcC------ceEEEEECCCCCCCCCc
Confidence 567888999999999999999999 999999875334689999999998643 34777888999999986
Q ss_pred C---hhHHHHHHHHhCCEEEeecccccccccCc--cchhhhcCCCCC-CeeEEccCCcCCCC-CcceEEE--eeCc---h
Q 037144 251 P---LKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHFIDGVECV-DSFSFNPHKWLFTT-LDCCCLW--VKDP---S 318 (502)
Q Consensus 251 p---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~--~~~~~~~~~~~a-Dsi~~~~hK~l~~p-~~~g~~~--~r~~---~ 318 (502)
| +++|+++|++||+|+++|++|+.+....+ .... +. ... |.++.++||+++.| ..+|+++ .++. .
T Consensus 192 ~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~-~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 268 (406)
T 1xi9_A 192 DKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGS-LT--KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSE 268 (406)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHH-HC--SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHH-cC--CCceEEEEeccccccCCCccEEEEEEEecCchhHHH
Confidence 5 99999999999999999999988654111 1111 11 244 67888999999733 3478887 4331 3
Q ss_pred hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcC
Q 037144 319 CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSD 396 (502)
Q Consensus 319 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~ 396 (502)
.. +.+.....+.. + ...+..+++...+ +.++++++.++..++++++.+.|+++
T Consensus 269 l~-~~l~~~~~~~~----------------------~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 323 (406)
T 1xi9_A 269 VR-EAIDRLARIRL----------------------C--PNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEI 323 (406)
T ss_dssp HH-HHHHHHHHHTC----------------------C--SCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HH-HHHHHHHHhhc----------------------C--CCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 32 22211111100 0 0122233333332 45668888899999999999999999
Q ss_pred CCeEEecCCCeeEEEE-EeecC-cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CE
Q 037144 397 KRFEVAFPRNFSLVCF-RVTPS-AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GI 471 (502)
Q Consensus 397 ~~~~l~~~~~~~~v~f-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~ 471 (502)
|++++. ++..++++| .+... +. + ..++.+++. +.|..+.++..+. +.
T Consensus 324 ~~~~~~-~~~~~~~~~~~~~~~~~~-------------------------~--~~~l~~~l~~~~gi~v~~g~~f~~~~~ 375 (406)
T 1xi9_A 324 PGISTT-KPQGAFYIFPKIEVGPWK-------------------------N--DKEFVLDVLHNAHVLFVHGSGFGEYGA 375 (406)
T ss_dssp TTEECC-CCCBSSEECCEECSCSCS-------------------------S--HHHHHHHHHHHHCEECEEGGGGCGGGT
T ss_pred CCCeee-cCCeeEEEEEecCccCCC-------------------------C--HHHHHHHHHHhCCEEEeCchhcCCCCC
Confidence 898876 444455554 44320 10 0 235666665 5686544433332 24
Q ss_pred EEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 472 YVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 472 ~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.++|++++ +++++|+++++.|.++.++
T Consensus 376 ~~lRis~~---~~~~~i~~~~~~l~~~l~~ 402 (406)
T 1xi9_A 376 GHFRAVFL---PPIEILEEAMDRFEKFMKE 402 (406)
T ss_dssp TBEEEECC---SCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEec---CCHHHHHHHHHHHHHHHHH
Confidence 68999986 6778999999999988765
No 50
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.93 E-value=1.3e-24 Score=222.82 Aligned_cols=311 Identities=15% Similarity=0.146 Sum_probs=206.0
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHHHH--
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQKAA-- 192 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~aa-- 192 (502)
....++.+++++++|.+.+ .+++|+|+++++..++.+++...... .++ .+|+++...|.++..+.
T Consensus 71 ~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~al~~al~~~~~~~~~~-----~~gd~vii~~~~~~~~~~~~~~~ 138 (416)
T 1qz9_A 71 DLSERLGNRLATLIGARDG-------EVVVTDTTSINLFKVLSAALRVQATR-----SPERRVIVTETSNFPTDLYIAEG 138 (416)
T ss_dssp GHHHHHHHHHHTTTTCCTT-------SEEECSCHHHHHHHHHHHHHHHHHHH-----STTCCEEEEETTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcc-------cEEEeCChhHHHHHHHHhhccccccc-----CCCCcEEEEcCCCCCchHHHHHH
Confidence 4556788999999998643 58899999998877777665210000 033 36777878998766543
Q ss_pred --HHc--CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144 193 --QIV--GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 193 --~~~--Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV 268 (502)
+.. |+ +++.+|+ +++|+++|+++ +.+|+++.++|++|.+.|+++|.++|++||+|+|+
T Consensus 139 ~~~~~~~g~---~~~~v~~---------~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~ 200 (416)
T 1qz9_A 139 LADMLQQGY---TLRLVDS---------PEELPQAIDQD------TAVVMLTHVNYKTGYMHDMQALTALSHECGALAIW 200 (416)
T ss_dssp HHHHHCSSC---EEEEESS---------GGGHHHHCSTT------EEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHhcCCc---eEEEeCc---------HHHHHHHhCCC------ceEEEEeccccCcccccCHHHHHHHHHHcCCEEEE
Confidence 334 88 8888875 56788877542 45899999999999999999999999999999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc-eEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccC
Q 037144 269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC-CCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVG 346 (502)
Q Consensus 269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~-g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~ 346 (502)
|++|+.+....+ .... ++|++++++||+++.+.++ |++++++... . .+.. ...|........ ....+.
T Consensus 201 D~a~~~g~~~~~-~~~~-----~~d~~~~s~~K~l~~g~~~~g~l~~~~~~~-~-~l~~~~~g~~g~~~~~~--~~~~~~ 270 (416)
T 1qz9_A 201 DLAHSAGAVPVD-LHQA-----GADYAIGCTYKYLNGGPGSQAFVWVSPQLC-D-LVPQPLSGWFGHSRQFA--MEPRYE 270 (416)
T ss_dssp ECTTTTTTSCCC-HHHH-----TCSEEEECSSSTTCCCTTCCCEEEECTTTT-T-TSCCSCCCGGGBCTTSC--CCSSCC
T ss_pred EccccccCcCCC-hhhc-----CCCEEEecCcccCCCCCCCeEEEEECHHHH-h-ccCCCccccCccccccC--CCCccC
Confidence 999986544332 2221 5899999999999777777 9998875521 1 1211 111111000000 000000
Q ss_pred CC--cccccCCC-C-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-C--CeEEecCC----CeeEEEEEee
Q 037144 347 YK--DWQITLCR-R-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD-K--RFEVAFPR----NFSLVCFRVT 415 (502)
Q Consensus 347 ~~--~~~~~~sr-~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~-~--~~~l~~~~----~~~~v~f~~~ 415 (502)
+. ......+. . ....++..+++.+..++++++.++..++++++.+.|+++ | ++++..+. ..++++|.+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 350 (416)
T 1qz9_A 271 PSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHP 350 (416)
T ss_dssp BCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECT
T ss_pred CCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecC
Confidence 00 00111111 1 112344566766666788899999999999999999885 6 89887543 3567776653
Q ss_pred cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144 416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV 495 (502)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l 495 (502)
. ..++.+.|.++|... . ..+..++|+++.++.++++||+++++.|
T Consensus 351 ~-------------------------------~~~l~~~l~~~gi~~-~---~~~~~~lRis~~~~~~t~~~i~~~~~~l 395 (416)
T 1qz9_A 351 E-------------------------------GYAVIQALIDRGVIG-D---YREPRIMRFGFTPLYTTFTEVWDAVQIL 395 (416)
T ss_dssp T-------------------------------HHHHHHHHHTTTEEC-E---EETTTEEEEECCTTTCCHHHHHHHHHHH
T ss_pred C-------------------------------HHHHHHHHHhCCcEe-c---cCCCCeEEEeCcccCCCHHHHHHHHHHH
Confidence 1 235677777778542 2 2245689999864467888999999999
Q ss_pred HHHHHh
Q 037144 496 QEHLEA 501 (502)
Q Consensus 496 ~~~~~~ 501 (502)
+++.++
T Consensus 396 ~~~~~~ 401 (416)
T 1qz9_A 396 GEILDR 401 (416)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 987653
No 51
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.93 E-value=2.7e-25 Score=227.60 Aligned_cols=325 Identities=11% Similarity=0.042 Sum_probs=224.7
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (502)
..+.+.+ ..+......|...++..++++.+.+|+.+.+|.+... ..+++|+|||+|+..++.+...
T Consensus 59 ~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~v~~~~g~t~a~~~~~~~~~~-------- 124 (409)
T 2gb3_A 59 EVFFERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKP-----ENVLVTNGGSEAILFSFAVIAN-------- 124 (409)
T ss_dssp THHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCG-----GGEEEESHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCH-----HHEEEeCCHHHHHHHHHHHhCC--------
Confidence 3455556 6665444456655667899999999999988864321 2689999999999888876532
Q ss_pred cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
+++.|+++..+|.++..+++..|. +++.+|+++++++.+ +++|+++++++ +.+|+++.++|++|.+-
T Consensus 125 ---~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~-~~~l~~~l~~~------~~~v~~~~p~nptG~~~ 191 (409)
T 2gb3_A 125 ---PGDEILVLEPFYANYNAFAKIAGV---KLIPVTRRMEEGFAI-PQNLESFINER------TKGIVLSNPCNPTGVVY 191 (409)
T ss_dssp ---TTCEEEEEESCCTHHHHHHHHHTC---EEEEEECCGGGTSCC-CTTGGGGCCTT------EEEEEEESSCTTTCCCC
T ss_pred ---CCCEEEEcCCCchhHHHHHHHcCC---EEEEeccCCCCCCcc-HHHHHHhhCcC------CeEEEECCCCCCCCCCc
Confidence 567888999999999999999999 999999875333555 88888887542 44778888999999984
Q ss_pred ---ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcC
Q 037144 251 ---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLST 326 (502)
Q Consensus 251 ---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~ 326 (502)
++++|+++|++||+++++|++|+++.... .....+.++...|+++.++||+++.| ..+|+++++++.... .+..
T Consensus 192 ~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~-~l~~ 269 (409)
T 2gb3_A 192 GKDEMRYLVEIAERHGLFLIVDEVYSEIVFRG-EFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELIS-HAMK 269 (409)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEECcccccccCC-CCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHHH-HHHH
Confidence 58999999999999999999998765422 11121334446789999999999744 347888887633322 2211
Q ss_pred CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 037144 327 NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP 404 (502)
Q Consensus 327 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~ 404 (502)
...+. + ....+..+++...+ +.++++++.++..++++++.+.|++. +++++..
T Consensus 270 ~~~~~-------------------~-----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 324 (409)
T 2gb3_A 270 LAQGR-------------------L-----APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH-GLKRFTK 324 (409)
T ss_dssp HHHHS-------------------C-----CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCC
T ss_pred HHhcc-------------------C-----CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc-CceeeeC
Confidence 00000 0 00223333333333 56778888999999999999999988 7887224
Q ss_pred CCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc------CcEEEEeeeE-----CCEE
Q 037144 405 RNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS------GKVFMTHAIV-----GGIY 472 (502)
Q Consensus 405 ~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~~~~~~~~~-----~g~~ 472 (502)
+..++++| .+.... ..++.++|.++ |..+.++..+ .+..
T Consensus 325 ~~~~~~~~~~~~~~~-----------------------------~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~ 375 (409)
T 2gb3_A 325 PSGAFYITAELPVED-----------------------------AEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKK 375 (409)
T ss_dssp CSBSSEEEEECSSSC-----------------------------HHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSS
T ss_pred CCeeEEEEEEeCCCC-----------------------------HHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCC
Confidence 44444444 443110 24567777766 7544433222 2357
Q ss_pred EEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 473 VLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 473 ~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
++|++++ +++++|+++++.|+++.++
T Consensus 376 ~iRis~~---~~~e~i~~~~~~l~~~l~~ 401 (409)
T 2gb3_A 376 EIRIACV---LEKDLLSRAIDVLMEGLKM 401 (409)
T ss_dssp EEEEECC---SCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeC---CCHHHHHHHHHHHHHHHHH
Confidence 9999976 5778999999999987654
No 52
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.93 E-value=1.2e-24 Score=220.94 Aligned_cols=326 Identities=11% Similarity=0.073 Sum_probs=223.3
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCC--CCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDL--PKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK 167 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~--~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~ 167 (502)
+..+.+.+...+......|.. ...++++++.+++++++|. +.+ ..++|+||++|+..++.+...
T Consensus 47 ~~~v~~a~~~~~~~~~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~-------~v~~~~g~~~a~~~~~~~~~~----- 112 (391)
T 4dq6_A 47 APCIIDSLKNRLEQEIYGYTT--RPDSYNESIVNWLYRRHNWKIKSE-------WLIYSPGVIPAISLLINELTK----- 112 (391)
T ss_dssp CHHHHHHHHHHHTTCCCCCBC--CCHHHHHHHHHHHHHHHCCCCCGG-------GEEEESCHHHHHHHHHHHHSC-----
T ss_pred CHHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHHHHHHhCCCCcHH-------HeEEcCChHHHHHHHHHHhCC-----
Confidence 344556666666544444443 3478999999999999994 333 689999999999888776643
Q ss_pred hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecC--CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144 168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTT--KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245 (502)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~--~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~ 245 (502)
+++.|+++..+|.++..+++..|. +++.+|++ .++++.+|+++|++++++ +.+|+++.++|+
T Consensus 113 ------~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~v~i~~p~np 176 (391)
T 4dq6_A 113 ------ANDKIMIQEPVYSPFNSVVKNNNR---ELIISPLQKLENGNYIMDYEDIENKIKD-------VKLFILCNPHNP 176 (391)
T ss_dssp ------TTCEEEECSSCCTHHHHHHHHTTC---EEEECCCEECTTSCEECCHHHHHHHCTT-------EEEEEEESSBTT
T ss_pred ------CCCEEEEcCCCCHHHHHHHHHcCC---eEEeeeeeecCCCceEeeHHHHHHHhhc-------CCEEEEECCCCC
Confidence 567888999999999999999999 99999987 345678999999999865 347888889999
Q ss_pred cccc---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC----CCCCeeEEccCCcCC-CCCcceEEEeeCc
Q 037144 246 ITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV----ECVDSFSFNPHKWLF-TTLDCCCLWVKDP 317 (502)
Q Consensus 246 ~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~----~~aDsi~~~~hK~l~-~p~~~g~~~~r~~ 317 (502)
+|.+ +++++|+++|++||+++++|++|+.+......... +..+ .....++.++||+++ .+...|+++++++
T Consensus 177 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~ 255 (391)
T 4dq6_A 177 VGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIP-MASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDE 255 (391)
T ss_dssp TTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSH
T ss_pred CCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccC-HHHcCccccCcEEEEEechhhccCcccceEEEEeCCH
Confidence 9999 78999999999999999999999775432211111 1111 022367789999996 4456788887764
Q ss_pred hhhhhhhcCC-cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-
Q 037144 318 SCLLSTLSTN-PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS- 395 (502)
Q Consensus 318 ~~l~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~- 395 (502)
.... .+... ..+... .........+..++.. +.+.++++.++..++++++.+.|++
T Consensus 256 ~~~~-~~~~~~~~~~~~--------------------~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~ 313 (391)
T 4dq6_A 256 KDYK-LLDDAFTRIDIK--------------------RNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINEN 313 (391)
T ss_dssp HHHH-HHHHHHHHTTCC--------------------CCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHHHHhhcCC--------------------CCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4322 22110 000000 0000111222333333 4566888889999999999999988
Q ss_pred CCCeEEecCCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC--CE
Q 037144 396 DKRFEVAFPRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--GI 471 (502)
Q Consensus 396 ~~~~~l~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~ 471 (502)
+|++++.. +..+++. +.+...+. ...++.+.|.++ |..+.++..+. +.
T Consensus 314 ~~~~~~~~-~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~ 365 (391)
T 4dq6_A 314 MPKLKVRK-PEGTYLLWVDFSALGL---------------------------SDEELESILVQKGKVALNQGNSFGIGGS 365 (391)
T ss_dssp CTTSEECC-CSBSSEEEEECGGGCC---------------------------CHHHHHHHHHHTTCEECEEGGGGCTTCT
T ss_pred CCCCEecC-CCccEEEEEEhhhcCC---------------------------CHHHHHHHHHHhCCEEeeCchhhCCCCC
Confidence 78999874 4445544 44432110 034677778887 76544433332 34
Q ss_pred EEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 472 YVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 472 ~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
.++|++++ +++++|+++++.|.++.
T Consensus 366 ~~iRis~~---~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 366 GYQRINLA---CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp TEEEEECC---SCHHHHHHHHHHHHHHH
T ss_pred CeEEEEEc---CCHHHHHHHHHHHHHHh
Confidence 78999986 46789999999998865
No 53
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.93 E-value=5.2e-25 Score=223.73 Aligned_cols=330 Identities=11% Similarity=0.048 Sum_probs=222.9
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCc-EEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGG-GVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~-g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
+..+.+.+...+......|....+..++++.+.+|+.+.+|.+... .. .++|+||++++..++.+...
T Consensus 41 ~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~~v~~~~g~~~a~~~~~~~~~~------ 109 (389)
T 1gd9_A 41 PQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADP-----KTEIMVLLGANQAFLMGLSAFLK------ 109 (389)
T ss_dssp CHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCT-----TTSEEEESSTTHHHHHHHTTTCC------
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC-----CCeEEEcCChHHHHHHHHHHhCC------
Confidence 3445555555553333346555567899999999999998863211 26 89999999999887766532
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|+++..+|.++..+++..|+ +++.+|+++++++.+|+++|+++++++ +.+|+++.++|++|.
T Consensus 110 -----~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~ 175 (389)
T 1gd9_A 110 -----DGEEVLIPTPAFVSYAPAVILAGG---KPVEVPTYEEDEFRLNVDELKKYVTDK------TRALIINSPCNPTGA 175 (389)
T ss_dssp -----TTCEEEEEESCCTTHHHHHHHHTC---EEEEEECCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCC
T ss_pred -----CCCEEEEcCCCchhHHHHHHHCCC---EEEEeccCCccCCCCCHHHHHHhcCcC------ceEEEEECCCCCCCc
Confidence 567888899999999999999999 999999875334689999999998642 346777889999999
Q ss_pred cC---ChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhh
Q 037144 249 VD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLS 322 (502)
Q Consensus 249 id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~ 322 (502)
+- ++++|+++|++||+++++|++|+.+.......... +.+....|+++.++||+++.| ..+|++++++ ... +
T Consensus 176 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~-~ 253 (389)
T 1gd9_A 176 VLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPS-WII-E 253 (389)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCH-HHH-H
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECH-HHH-H
Confidence 86 59999999999999999999998865532111111 122346789999999998744 4478888753 322 2
Q ss_pred hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHH--HHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144 323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVA--NLRNFIRSHVGMAKLFERLVTSDKR 398 (502)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~--g~~~~~~~~~~la~~l~~~l~~~~~ 398 (502)
.+.....+.. + ....+..+++...+ +.+ +++++.++..++++++.+.|+++ +
T Consensus 254 ~l~~~~~~~~-----------------~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 309 (389)
T 1gd9_A 254 RMVKFQMYNA-----------------T------CPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM-G 309 (389)
T ss_dssp HHHHHHTTTT-----------------C------SCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred HHHHHHhhhc-----------------c------CCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 2211100000 0 00222233333333 334 67888899999999999999988 7
Q ss_pred eEEecCCCeeE-EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEE
Q 037144 399 FEVAFPRNFSL-VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVL 474 (502)
Q Consensus 399 ~~l~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~l 474 (502)
+++.. +..++ +++.+.+.+. + ..++.++|. +.|..+.++..+. +..++
T Consensus 310 ~~~~~-~~~~~~~~~~~~~~~~-------------------------~--~~~~~~~l~~~~gi~v~~g~~~~~~~~~~i 361 (389)
T 1gd9_A 310 LPTVK-PKGAFYIFPRIRDTGL-------------------------T--SKKFSELMLKEARVAVVPGSAFGKAGEGYV 361 (389)
T ss_dssp CCCCC-CCBTTEECCBCGGGTC-------------------------C--HHHHHHHHHHHTCEECEEGGGGCGGGTTBE
T ss_pred CeecC-CCeeeEEEEeccCCCC-------------------------C--HHHHHHHHHHhCCEEEeCchhhCCCCCCeE
Confidence 87764 44443 3334432010 0 235667776 6676544433222 34689
Q ss_pred EEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 475 RFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 475 R~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
|++++. ++++|+++++.|.++.++
T Consensus 362 Ri~~~~---~~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 362 RISYAT---AYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp EEECCS---CHHHHHHHHHHHHHHHHH
T ss_pred EEEecC---CHHHHHHHHHHHHHHHHh
Confidence 999863 677999999999988764
No 54
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.93 E-value=8.7e-26 Score=226.86 Aligned_cols=340 Identities=11% Similarity=0.032 Sum_probs=222.4
Q ss_pred CCCCCHHHHHHHHHHhhcC---CCCcc---cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHHHHHH
Q 037144 84 PATSSVAGIVGEMLSSGFN---VVGLD---WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEALLCT 156 (502)
Q Consensus 84 ~~~~~~~~~~~~~l~~~~n---~~~~~---~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~a 156 (502)
.+.+.++.++..+.....+ ++... ...++.+.++-+++++.+++++|.++.. ..+| |+|||+++.++
T Consensus 20 t~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~------evif~t~~~T~a~n~a 93 (377)
T 3e77_A 20 FQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNY------KVIFLQGGGCGQFSAV 93 (377)
T ss_dssp CSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCC------eEEEEcCchHHHHHHH
Confidence 3445556655555443332 22221 2345677888889999999999997642 5788 68999998777
Q ss_pred HHHHHHHHHHHhCccCCCCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 037144 157 LTAARDRVLKKIGRENISKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIP 234 (502)
Q Consensus 157 l~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p 234 (502)
+...... .+++.+++...+|++ +.+.++..|. .++.+|+++ ++..++++++.++++++
T Consensus 94 ~~~l~~~---------~~Gd~v~~~~~g~~~~~~~~~a~~~G~---~~~~~~~~~--~~~~~~~~~~~~i~~~t------ 153 (377)
T 3e77_A 94 PLNLIGL---------KAGRCADYVVTGAWSAKAAEEAKKFGT---INIVHPKLG--SYTKIPDPSTWNLNPDA------ 153 (377)
T ss_dssp HHHHGGG---------STTCEEEECCCSHHHHHHHHHHTTTSE---EEECSCCCS--SSCSCCCGGGCCCCTTC------
T ss_pred HHhccCC---------CCCCeEEEEECCHHHHHHHHHHHHhCC---ceEEeccCC--CcCCCCChHHhccCCCc------
Confidence 6654321 024566666667765 3344555676 777778764 34667777766665444
Q ss_pred EEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEe
Q 037144 235 LFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWV 314 (502)
Q Consensus 235 ~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~ 314 (502)
.+|++++.+|.+|.+.|+ +|+++|+++|||++++.+..+++-. ..|.+++++|||+ +|.|.|++++
T Consensus 154 ~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~--------~~~~~~~s~~K~~-gp~G~g~l~~ 219 (377)
T 3e77_A 154 SYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVS--------KFGVIFAGAQKNV-GSAGVTVVIV 219 (377)
T ss_dssp SCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGG--------GCSEEEEEGGGTT-SCTTCEEEEE
T ss_pred cEEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCCCCchh--------hcCEEEEeccccc-CCCccEEEEE
Confidence 378899999999999999 4788999999999999888877532 3456899999999 5999999999
Q ss_pred eCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHH
Q 037144 315 KDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERL 392 (502)
Q Consensus 315 r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~ 392 (502)
|++.. ...-...+.|+...... . .....++-. +....+..+++.+-.+ |++++.++..++++++++.
T Consensus 220 ~~~~l-~~~~~~~p~~~~~~~~~--------~--~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~ 288 (377)
T 3e77_A 220 RDDLL-GFALRECPSVLEYKVQA--------G--NSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEI 288 (377)
T ss_dssp ETTSC-SCCCTTSCGGGCHHHHH--------T--TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHH-hhccCCCCchhhHHHHh--------h--cCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHH
Confidence 87642 11111112232100000 0 000000101 1224566777777677 8999999999999999999
Q ss_pred HhcCCCeEEecC---CCee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE
Q 037144 393 VTSDKRFEVAFP---RNFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV 468 (502)
Q Consensus 393 l~~~~~~~l~~~---~~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~ 468 (502)
|+++||+++... ..++ +++|.++.... . .++...+.+.+.+.|.+...+ .
T Consensus 289 L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~---------------------~---~~~~~~~l~~l~~~Gi~~~~g--~ 342 (377)
T 3e77_A 289 IDNSQGFYVCPVEPQNRSKMNIPFRIGNAKG---------------------D---DALEKRFLDKALELNMLSLKG--H 342 (377)
T ss_dssp HHTSTTSEECCSCGGGBCSSEEEEEESSTTC---------------------C---HHHHHHHHHHHHHTTEESCBC--C
T ss_pred HHhcCCceecCCCHHHcCCcEEEEEcCCCCC---------------------c---hhHHHHHHHHHHHCCcEEeCC--C
Confidence 999999986431 2344 58998864210 0 122235666666778643222 1
Q ss_pred CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 469 GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 469 ~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
...+.+|+|+.+ .++++|||+++++|+++.++
T Consensus 343 ~~~g~iRiS~~~-~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 343 RSVGGIRASLYN-AVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp TTTCSEEEECCT-TSCHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEEECCC-CCCHHHHHHHHHHHHHHHHH
Confidence 223469999875 46777999999999998764
No 55
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.93 E-value=1e-24 Score=221.75 Aligned_cols=324 Identities=11% Similarity=0.052 Sum_probs=224.1
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+......|...++..++++.+.+|+.+.+|++... ...++|+||++++..++.+...
T Consensus 56 ~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~-----~~v~~~~g~t~al~~~~~~l~~------- 123 (389)
T 1o4s_A 56 PEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISP-----DQVVVTNGAKQALFNAFMALLD------- 123 (389)
T ss_dssp CHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCG-----GGEEEESHHHHHHHHHHHHHCC-------
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCH-----HHEEEecCHHHHHHHHHHHhCC-------
Confidence 3445666666664433456555677899999999999988874211 2689999999999888776532
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|+++..+|.++..+++..|+ +++.+|.++++++.+|+++|+++++++ +.+|+++.++|++|.+
T Consensus 124 ----~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~ 190 (389)
T 1o4s_A 124 ----PGDEVIVFSPVWVSYIPQIILAGG---TVNVVETFMSKNFQPSLEEVEGLLVGK------TKAVLINSPNNPTGVV 190 (389)
T ss_dssp ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECCGGGTTCCCHHHHHHTCCTT------EEEEEEESSCTTTCCC
T ss_pred ----CCCEEEEcCCCchhHHHHHHHcCC---EEEEEecCCccCCCCCHHHHHHhcccC------ceEEEEcCCCCCCCCC
Confidence 567888899999999999999999 999999975334789999999988643 3467788899999999
Q ss_pred CC---hhHHHHHHHHhCCEEEeecccccccccCc--cchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhh
Q 037144 250 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLST 323 (502)
Q Consensus 250 dp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~--~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~ 323 (502)
-| +++|+++|++||+++++|++|+.+....+ .... +.+....|.++.++||+++.| ..+|++++++. .. +.
T Consensus 191 ~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~-~~-~~ 267 (389)
T 1o4s_A 191 YRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILD-VSEGFDRIVYINGFSKSHSMTGWRVGYLISSEK-VA-TA 267 (389)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHH-HCSSSTTEEEEEESTTTTTCGGGCCEEEECCHH-HH-HH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhh-cCCCCCcEEEEeechhhcCCcccceEEEEeCHH-HH-HH
Confidence 66 99999999999999999999987654211 1111 222246789999999999733 34788887533 22 22
Q ss_pred hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144 324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF 403 (502)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~ 403 (502)
+.....+... ....+..+++...+.. +++++.++..++++++.+.|+++ ++++..
T Consensus 268 l~~~~~~~~~-----------------------~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 322 (389)
T 1o4s_A 268 VSKIQSHTTS-----------------------CINTVAQYAALKALEV-DNSYMVQTFKERKNFVVERLKKM-GVKFVE 322 (389)
T ss_dssp HHHHHHHHTC-----------------------SCCHHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHT-TCCCCC
T ss_pred HHHHhhhccc-----------------------CCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhc-CCeeec
Confidence 2111000000 0123444455555532 27788888999999999999988 787763
Q ss_pred CCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEEEecCC
Q 037144 404 PRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRFAAGNS 481 (502)
Q Consensus 404 ~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~ 481 (502)
+..+++. +.+. .. ..++.++|. +.|..+.++..+....++|+++++
T Consensus 323 -~~~~~~~~~~~~-~~-----------------------------~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~- 370 (389)
T 1o4s_A 323 -PEGAFYLFFKVR-GD-----------------------------DVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT- 370 (389)
T ss_dssp -CSBSSEEEEECS-SC-----------------------------HHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-
T ss_pred -CCcceEEEEeCC-CC-----------------------------HHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC-
Confidence 4444443 3442 11 235666665 568655444333323589999873
Q ss_pred CCcHHHHHHHHHHHHHHHH
Q 037144 482 MTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 482 ~t~~~di~~~~~~l~~~~~ 500 (502)
++++|+++++.|.++.+
T Consensus 371 --~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 371 --SIERLTEALDRIEDFLN 387 (389)
T ss_dssp --CHHHHHHHHHHHHHHHT
T ss_pred --CHHHHHHHHHHHHHHHh
Confidence 67799999999988765
No 56
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.93 E-value=4.6e-24 Score=217.17 Aligned_cols=300 Identities=11% Similarity=0.062 Sum_probs=211.2
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
.....++.+++++++|.+. .+++++||+++..++.+... +++.|+++...|.++..+++.
T Consensus 87 ~~~~~~l~~~la~~~~~~~---------~i~~~sGt~a~~~~l~~~~~-----------~gd~v~~~~~~~~~~~~~~~~ 146 (399)
T 3tqx_A 87 QTIHKELEKDISEFLGTDD---------TILYSSCFDANGGLFETLLG-----------PEDAIISDELNHASIIDGIRL 146 (399)
T ss_dssp BHHHHHHHHHHHHHHTCSE---------EEEESCHHHHHHTTHHHHCC-----------TTCEEEEETTCCHHHHHHHHS
T ss_pred chHHHHHHHHHHHHHCCCc---------EEEECchHHHHHHHHHHhcC-----------CCCEEEECCcccHHHHHHHHH
Confidence 3455567788888888763 46666778998877765432 677899999999999999999
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144 195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 274 (502)
Q Consensus 195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~ 274 (502)
.|. +++.+|. +|+++|++++++....+..+.+|+++.++|++|.+.|+++|.++|++||+++|+|++|+.
T Consensus 147 ~g~---~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~ 216 (399)
T 3tqx_A 147 CKA---QRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAV 216 (399)
T ss_dssp CCS---EEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTT
T ss_pred cCC---ceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccc
Confidence 999 8888875 477899999988665455677899999999999999999999999999999999999974
Q ss_pred ccccCccchhh--hcC-CCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc
Q 037144 275 SACICPEFRHF--IDG-VECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ 351 (502)
Q Consensus 275 ~~~~~~~~~~~--~~~-~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 351 (502)
+++.. ..... ..+ ....|+++.++||+++++.+ |+++.+ +............|....
T Consensus 217 ~~~~~-~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~-~~~~~~~~~~~~~~~~~~----------------- 276 (399)
T 3tqx_A 217 GFIGE-NGRGTPEYCGVADRVDILTGTLGKALGGASG-GYTSGH-KEIIEWLRNRSRPYLFSN----------------- 276 (399)
T ss_dssp TTSST-TSCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEEC-HHHHHHHHHHCHHHHSSC-----------------
T ss_pred cccCC-CCCchHHhhCCCCCCcEEEecchHhcccCce-EEEEcC-HHHHHHHHHhCcceeccC-----------------
Confidence 43321 11111 112 24679999999999985544 666654 433322222122222110
Q ss_pred ccCCCCCCch---HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhccc
Q 037144 352 ITLCRRFRSL---KLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYK 428 (502)
Q Consensus 352 ~~~sr~~~al---~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~ 428 (502)
....+ .+..+++... ++..++.++..++++++.+.|+++ ++++. ++..+++++.+..
T Consensus 277 -----~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~------------ 336 (399)
T 3tqx_A 277 -----TVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKL-GFQLV-PGNHPIIPVMLGD------------ 336 (399)
T ss_dssp -----CCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCSSSEEEEEEEC------------
T ss_pred -----CCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC------------
Confidence 11222 3333343322 567889999999999999999988 78776 5667777777643
Q ss_pred CCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE----CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144 429 NGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV----GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF 502 (502)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~ 502 (502)
.....++.++|.++|..+. +..+ .+..++|++++ ..+++++++++++.|+++.+++
T Consensus 337 ----------------~~~~~~~~~~l~~~gi~v~-~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 337 ----------------AQLATNMADHLLQEGIYVV-GFSYPVVPMGKARIRVQMS-AVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp ----------------HHHHHHHHHHHHHTTEECC-EECTTTSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHT
T ss_pred ----------------HHHHHHHHHHHHHCCCEEe-eeCCCCCCCCCceEEEEee-cCCCHHHHHHHHHHHHHHHHHh
Confidence 1124567788888886543 3322 34579999986 4567789999999999987753
No 57
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.93 E-value=1.5e-24 Score=222.99 Aligned_cols=332 Identities=12% Similarity=0.052 Sum_probs=224.3
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (502)
..+.+.+...+......|...+ .++++++++|+++.+|++... ...++|+|+++|+..++.+++.
T Consensus 77 ~~v~~a~~~~~~~~~~~y~~~~--~~l~~~l~~~l~~~~g~~~~~-----~~v~~~~g~~ea~~~a~~~~~~-------- 141 (421)
T 3l8a_A 77 PEIKEAIINYGREHIFGYNYFN--DDLYQAVIDWERKEHDYAVVK-----EDILFIDGVVPAISIALQAFSE-------- 141 (421)
T ss_dssp HHHHHHHHHHHHHCCSSCBCCC--HHHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSC--------
T ss_pred HHHHHHHHHHHhcCCcCCCCCC--HHHHHHHHHHHHHHhCCCCCH-----HHEEEcCCHHHHHHHHHHHhcC--------
Confidence 3455555555543333444333 788999999999999954221 2689999999999888887643
Q ss_pred cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecC-CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTT-KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~-~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|++...+|.++..+++..|. +++.+|++ .++++.+|+++|+++|++. .+.+|+++.+++++|.+
T Consensus 142 ---~gd~Vi~~~~~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~le~~i~~~-----~~~~vil~~p~nptG~~ 210 (421)
T 3l8a_A 142 ---KGDAVLINSPVYYPFARTIRLNDH---RLVENSLQIINGRFEIDFEQLEKDIIDN-----NVKIYLLCSPHNPGGRV 210 (421)
T ss_dssp ---TEEEEEEEESCCHHHHHHHHHTTE---EEEEEECEEETTEEECCHHHHHHHHHHT-----TEEEEEEESSBTTTTBC
T ss_pred ---CCCEEEECCCCcHHHHHHHHHCCC---EEEeccccccCCCeeeCHHHHHHHhhcc-----CCeEEEECCCCCCCCCc
Confidence 567888888999999999999999 99999986 3456789999999999742 13478888999999999
Q ss_pred ---CChhHHHHHHHHhCCEEEeecccccccccCccchhhhc---CCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhh
Q 037144 250 ---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID---GVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLS 322 (502)
Q Consensus 250 ---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~---~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~ 322 (502)
+++++|+++|++||+++++|++|+++............ .....+.+..+++|+++ .+..+|+++++++....
T Consensus 211 ~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~- 289 (421)
T 3l8a_A 211 WDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRR- 289 (421)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHH-
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHH-
Confidence 78999999999999999999999876543211111111 11234477888999997 45677888887554432
Q ss_pred hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
.+....... +..+.......++.++++. +.++++++.++..++++++.+.|++.|++++.
T Consensus 290 ~~~~~~~~~-------------------~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~ 349 (421)
T 3l8a_A 290 KFQYRQLAN-------------------NQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIKVM 349 (421)
T ss_dssp HHHHHHHHT-------------------TCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEE
T ss_pred HHHHHHHhc-------------------ccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCceEe
Confidence 221110000 0000111122233344443 56778899999999999999999887899987
Q ss_pred cCCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeE--CCEEEEEEEe
Q 037144 403 FPRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIV--GGIYVLRFAA 478 (502)
Q Consensus 403 ~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lR~~~ 478 (502)
. +..+++. +.+...+. ...++.+.+.++ |..+.++..+ .+..++|+++
T Consensus 350 ~-~~~~~~~~v~~~~~~~---------------------------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~ 401 (421)
T 3l8a_A 350 E-PEGTYLVWLDFSAYAI---------------------------AQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNV 401 (421)
T ss_dssp C-CSBSSEEEEECGGGTC---------------------------CTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEEC
T ss_pred C-CCeeEEEEEeccccCC---------------------------CHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEe
Confidence 4 4444444 44432110 023566667644 6544333222 2357999998
Q ss_pred cCCCCcHHHHHHHHHHHHHHHH
Q 037144 479 GNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 479 ~~~~t~~~di~~~~~~l~~~~~ 500 (502)
+ +++++|+++++.|.++.+
T Consensus 402 ~---~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 402 A---TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp C---SCHHHHHHHHHHHHHHC-
T ss_pred c---CCHHHHHHHHHHHHHHHh
Confidence 6 478899999999988754
No 58
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.93 E-value=5.3e-25 Score=224.83 Aligned_cols=316 Identities=12% Similarity=0.076 Sum_probs=215.0
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch
Q 037144 107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC 186 (502)
Q Consensus 107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~ 186 (502)
.|...++..++++++.+++++.+|.+... ....++|+||++|+..++.+... +++.|+++..+|.
T Consensus 73 ~y~~~~g~~~l~~~l~~~l~~~~g~~~~~----~~~i~~~~g~~~a~~~~~~~l~~-----------~gd~vl~~~~~~~ 137 (407)
T 3nra_A 73 AYTEYRGDLGIRDLLAPRLAAFTGAPVDA----RDGLIITPGTQGALFLAVAATVA-----------RGDKVAIVQPDYF 137 (407)
T ss_dssp HSCCTTCCHHHHHHHHHHHHHHHTSCCCT----TTSEEEESHHHHHHHHHHHTTCC-----------TTCEEEEEESCCT
T ss_pred CcCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCcHHHHHHHHHHhCC-----------CCCEEEEcCCccc
Confidence 45555677889999999999999985210 01589999999999877765432 5778889999999
Q ss_pred hHHHHHHHcCCCCCCEEEEecCC----CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHH
Q 037144 187 AFQKAAQIVGIDRKNIRAIKTTK----SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVA 259 (502)
Q Consensus 187 s~~~aa~~~Glg~~~v~~v~~~~----~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~ 259 (502)
++..+++..|. +++.+|++. ++++.+|+++|++++++.+ .+|+++.++|++|.+-| +++|+++|
T Consensus 138 ~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~p~nptG~~~~~~~l~~i~~~~ 208 (407)
T 3nra_A 138 ANRKLVEFFEG---EMVPVQLDYVSADETRAGLDLTGLEEAFKAGA------RVFLFSNPNNPAGVVYSAEEIGQIAALA 208 (407)
T ss_dssp HHHHHHHHTTC---EEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTC------CEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred chHHHHHHcCC---EEEEeecccccccCcCCCcCHHHHHHHHhhCC------cEEEEcCCCCCCCcccCHHHHHHHHHHH
Confidence 99999999999 999999842 1357899999999997632 37788889999999988 99999999
Q ss_pred HHhCCEEEeecccccccccCccchhhh--c-CCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCcc
Q 037144 260 KQFGIWVHVDAAYAGSACICPEFRHFI--D-GVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEA 335 (502)
Q Consensus 260 ~~~g~~lhVDaA~g~~~~~~~~~~~~~--~-~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~ 335 (502)
++||+++++|++|+.+.+......... . .....+.++.++||+++ .+..+|+++.+ +.... .+.....+...
T Consensus 209 ~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~-~l~~~~~~~~~-- 284 (407)
T 3nra_A 209 ARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGS-RAIIA-RMEKLQAIVSL-- 284 (407)
T ss_dssp HHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEEC-HHHHH-HHHHHHHHHTS--
T ss_pred HHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcC-HHHHH-HHHHHHhhhcc--
Confidence 999999999999987654321111110 0 11244577889999997 44567877663 33322 22111000000
Q ss_pred CCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEE
Q 037144 336 TDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFR 413 (502)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~ 413 (502)
....+..+++...+ +.+.+++..++..++++++.+.|+++|++++..+....++.+.
T Consensus 285 ---------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 343 (407)
T 3nra_A 285 ---------------------RAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPR 343 (407)
T ss_dssp ---------------------SSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCB
T ss_pred ---------------------CCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEe
Confidence 00122222222333 3456788888999999999999999988887644333444444
Q ss_pred eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHH
Q 037144 414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRA 490 (502)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~ 490 (502)
+..... ...++.+.|.++ |..+.++..+. +..++|++++. ++++|++
T Consensus 344 ~~~~~~---------------------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~---~~~~i~~ 393 (407)
T 3nra_A 344 LPKLAV---------------------------APAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ---DHEAAVA 393 (407)
T ss_dssp CCCBSS---------------------------CHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS---CHHHHHH
T ss_pred CCCCCC---------------------------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC---CHHHHHH
Confidence 432110 023556666543 76544333222 45789999863 7789999
Q ss_pred HHHHHHHHHHh
Q 037144 491 AWTVVQEHLEA 501 (502)
Q Consensus 491 ~~~~l~~~~~~ 501 (502)
+++.|.++.++
T Consensus 394 ~~~~l~~~~~~ 404 (407)
T 3nra_A 394 AARRIVTLVER 404 (407)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988764
No 59
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.93 E-value=2.7e-24 Score=219.20 Aligned_cols=331 Identities=11% Similarity=0.018 Sum_probs=221.9
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+......|... ..++++.+.+|+.+.+|.+... ...++|+||++|+..++.+...
T Consensus 46 ~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~-----~~v~~t~g~~~a~~~~~~~l~~------- 111 (399)
T 1c7n_A 46 PPELIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQT-----DWIINTAGVVPAVFNAVREFTK------- 111 (399)
T ss_dssp CHHHHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHHCC-------
T ss_pred CHHHHHHHHHHHhcCCCCCCCC--cHHHHHHHHHHHHHHhCCCCCh-----hhEEEcCCHHHHHHHHHHHhcC-------
Confidence 3445555555543333344433 7889999999999988853211 2689999999999887776532
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecC-CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTT-KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~-~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|+++..+|.++..+++..|. +++.+|++ .++++.+|+++|+++|++. .+.+|+++.++|++|.
T Consensus 112 ----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~ 179 (399)
T 1c7n_A 112 ----PGDGVIIITPVYYPFFMAIKNQER---KIIECELLEKDGYYTIDFQKLEKLSKDK-----NNKALLFCSPHNPVGR 179 (399)
T ss_dssp ----TTCEEEECSSCCTHHHHHHHTTTC---EEEECCCEEETTEEECCHHHHHHHHTCT-----TEEEEEEESSBTTTTB
T ss_pred ----CCCEEEEcCCCcHhHHHHHHHcCC---EEEecccccCCCCEEEcHHHHHHHhccC-----CCcEEEEcCCCCCCCc
Confidence 567888999999999999999998 99999885 3234679999999998621 1346777899999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC----CCCCeeEEccCCcCCCC-CcceEEEeeCchhh
Q 037144 249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV----ECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCL 320 (502)
Q Consensus 249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~----~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l 320 (502)
+-| +++|+++|++||+++++|++|+.+......... +..+ ...+.++.++||+++.| ..+|+++++++...
T Consensus 180 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 258 (399)
T 1c7n_A 180 VWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTV-FQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIR 258 (399)
T ss_dssp CCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCccc-HHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHH
Confidence 988 999999999999999999999876542211111 1111 13456778899999744 45788888765433
Q ss_pred hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-CC
Q 037144 321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTS-DK 397 (502)
Q Consensus 321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~-~~ 397 (502)
.........+-. + ....+..+++...+ +.+.+++..++..++++++.+.|++ +|
T Consensus 259 ~~l~~~~~~~~~----------------------~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 315 (399)
T 1c7n_A 259 ERFTKSRDATSG----------------------M-PFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHP 315 (399)
T ss_dssp HHHHHHHHHTTC----------------------C-CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHhhccc----------------------C-CCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 221111100100 0 01223333333332 4567888888999999999999998 88
Q ss_pred CeEEecCCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEE
Q 037144 398 RFEVAFPRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYV 473 (502)
Q Consensus 398 ~~~l~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~ 473 (502)
++++. ++..+++. +.+...+. ...++.+.|. +.|..+.++..+. +..+
T Consensus 316 ~~~~~-~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~ 367 (399)
T 1c7n_A 316 EIKAP-LIEGTYLQWIDFRALKM---------------------------DHKAMEEFMIHKAQIFFDEGYIFGDGGIGF 367 (399)
T ss_dssp TSBCC-CCSBSSEEEEECGGGCC---------------------------CHHHHHHHHHHTTCCCCEEGGGGCGGGTTE
T ss_pred CCeEe-cCCceEEEEEEcccCCC---------------------------CHHHHHHHHHHhCCEEEeCccccCCCCCCe
Confidence 88776 45555554 45432100 0235677776 5687554443332 3468
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 474 LRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 474 lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+|++++. .+++++++++.|.++.++
T Consensus 368 iRis~~~---~~~~l~~~l~~l~~~l~~ 392 (399)
T 1c7n_A 368 ERINLAA---PSSVIQESLERLNKALKD 392 (399)
T ss_dssp EEEECCS---CHHHHHHHHHHHHHHHHH
T ss_pred EEEEecc---CHHHHHHHHHHHHHHHHH
Confidence 9999874 367999999999887654
No 60
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.92 E-value=2.7e-24 Score=217.99 Aligned_cols=326 Identities=9% Similarity=0.028 Sum_probs=210.2
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-- 187 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-- 187 (502)
.++.+.++.+++++++++++|.+. ..+||+|||+|+..++... . +++.|+++...|++
T Consensus 29 ~~~~~~~~~~~~~~~l~~~~~~~~--------~v~~~~sgt~a~~~~~~~~-~-----------~gd~vi~~~~~~~~~~ 88 (379)
T 3ke3_A 29 MSKAFQEVMNDLLSNLKTVYNAEA--------AVIIPGSGTYGMEAVARQL-T-----------IDEDCLIIRNGWFSYR 88 (379)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCSE--------EEEEESCHHHHHHHHHHHH-C-----------TTCEEEEEECSHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCC--------EEEEcCChhHHHHHHHHhC-C-----------CCCeEEEEeCCchhHH
Confidence 367777888899999999999873 5789999999987765322 1 46677777778766
Q ss_pred HHHHHHHcCCCCCCEEEEecCCCC------C-cccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHH
Q 037144 188 FQKAAQIVGIDRKNIRAIKTTKSS------S-YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCD 257 (502)
Q Consensus 188 ~~~aa~~~Glg~~~v~~v~~~~~~------~-~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~ 257 (502)
+...++..|++. +++.++.+..+ . +.+|+++|+++|++.. +.+|++++.+|++|.+.| +++|++
T Consensus 89 ~~~~~~~~g~~~-~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~~~G~~~~~~~l~~i~~ 162 (379)
T 3ke3_A 89 WTQILEKGKFAK-SSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDK-----SAIVYAPHVETSSGIILSEEYIKALSE 162 (379)
T ss_dssp HHHHHHHHCCSS-EEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHT-----CSEEEEESEETTTTEECCHHHHHHHHH
T ss_pred HHHHHHHhCCCC-ceEEEeccccccccccCCCCCCCHHHHHHHHhhcC-----CcEEEEEeecCCCceeCCHHHHHHHHH
Confidence 334556666522 56777764310 1 2689999999996431 237888999999999999 999999
Q ss_pred HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhc-CCcccccCccC
Q 037144 258 VAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLS-TNPQYLKNEAT 336 (502)
Q Consensus 258 i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~-~~~~yl~~~~~ 336 (502)
+|++||+++|+|++++ +..+.+- ... ++|++++++|||+++|.+.|++++++... ..... ...+|......
T Consensus 163 ~~~~~~~~li~D~~~~-g~~~~~~-~~~-----~~d~~~~s~~K~l~~~~g~g~~~~~~~~~-~~l~~~~~~~~~~~~~~ 234 (379)
T 3ke3_A 163 AVHSVGGLLVIDCIAS-GCVWLDM-KEL-----GIDVLISAPQKGWSSTPCAGLVMLSAAAI-KKVESTESNCFSLDLKQ 234 (379)
T ss_dssp HHHHTTCEEEEECTTC-TTCCCCH-HHH-----TCSEEEECTTTTTCSCCCEEEEEECHHHH-HHHHTCCCSCSTTCHHH
T ss_pred HHHHcCCEEEEEeccc-CCccccc-ccc-----CCCEEEecchhhcCCCCceEEEEECHHHH-HhhhcCCCCceeecHHH
Confidence 9999999999999997 4433321 111 78999999999999999999998875532 21111 11122111000
Q ss_pred CCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CeeEEEEE
Q 037144 337 DQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR--NFSLVCFR 413 (502)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~--~~~~v~f~ 413 (502)
-. ...+....+......+-. ....++.++++.+..+|++++.++..++++++++.|+++ |++++.++ .++++...
T Consensus 235 ~~-~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~ 312 (379)
T 3ke3_A 235 WL-TIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVS 312 (379)
T ss_dssp HH-HHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEE
T ss_pred HH-HHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEE
Confidence 00 000000000000000111 111244466666667788999999999999999999998 78886543 24444332
Q ss_pred eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee-----ECCEEEEEEEecCCCCcHHHH
Q 037144 414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI-----VGGIYVLRFAAGNSMTMESHV 488 (502)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-----~~g~~~lR~~~~~~~t~~~di 488 (502)
..+. ... .+.+.|.++|..+.++.. ..+..++|++++.+ ++++||
T Consensus 313 ~~~~---------------------------~~~--~~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~-~t~~di 362 (379)
T 3ke3_A 313 YTER---------------------------DDM--HKGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGL-DKLTDI 362 (379)
T ss_dssp ECSC---------------------------HHH--HSSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSH-HHHTCH
T ss_pred ccCC---------------------------cch--HHHHHHHHCCeEEeCCccccccccCcCCEEEEeCCcC-CCHHHH
Confidence 2221 011 124455667875333211 11256899998754 577799
Q ss_pred HHHHHHHHHHHHh
Q 037144 489 RAAWTVVQEHLEA 501 (502)
Q Consensus 489 ~~~~~~l~~~~~~ 501 (502)
++++++|+++.++
T Consensus 363 ~~~~~~l~~~l~~ 375 (379)
T 3ke3_A 363 DGTVERFEKALDE 375 (379)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988764
No 61
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.92 E-value=2.9e-25 Score=222.30 Aligned_cols=339 Identities=11% Similarity=0.018 Sum_probs=219.4
Q ss_pred cccccCCCCCCHHHHHHHHHHhhcC----CCCccc---ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCc
Q 037144 78 NYFAYFPATSSVAGIVGEMLSSGFN----VVGLDW---ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTT 149 (502)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~---~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~gg 149 (502)
+.+.|.+++...|..+.+.+...+. ++...+ ..++.+.++-.++++.+++++|.++.. ..+| |+||
T Consensus 5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~------~v~f~t~~~ 78 (361)
T 3m5u_A 5 RKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDY------EVLFLQGGA 78 (361)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHH
T ss_pred ceEeecCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCcH
Confidence 3455666666666556666555442 222222 225567788888999999999997532 5777 9999
Q ss_pred hHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh
Q 037144 150 CEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE 229 (502)
Q Consensus 150 t~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~ 229 (502)
|+++.+++.... . +....+|+.+..+|. +.+.++..|+ +++.+++++++.+.++++. + |++++
T Consensus 79 T~a~n~~~~~~~-~--------~~~~~~i~~~~~~~~-~~~~a~~~G~---~v~~~~~~~~g~~~~~~~~-~--l~~~t- 141 (361)
T 3m5u_A 79 SLQFAMIPMNLA-L--------NGVCEYANTGVWTKK-AIKEAQILGV---NVKTVASSEESNFDHIPRV-E--FSDNA- 141 (361)
T ss_dssp HHHHHHHHHHHC-C--------SSCEEEEECSHHHHH-HHHHHHHTTC---CEEEEEECTTTTSCSCCCC-C--CCTTS-
T ss_pred HHHHHHHHHhcC-C--------CCeEEEEeCCHHHHH-HHHHHHHcCC---ceEEEecccCcCCCcCChh-h--cCCCC-
Confidence 999977766442 1 112234555555564 4455566798 9999999874322256665 3 65443
Q ss_pred cCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc
Q 037144 230 AELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC 309 (502)
Q Consensus 230 ~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~ 309 (502)
.+|.+++.+|.+|.+.|. |++ +|+++|||++++.+..+++- +.+|++++++|||++ |.|+
T Consensus 142 -----~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~--------~~~d~~~~s~~K~~g-p~G~ 201 (361)
T 3m5u_A 142 -----DYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVDF--------SNIALFYGGVQKNAG-ISGL 201 (361)
T ss_dssp -----SEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCCC--------TTEEEEEEETTTTSS-CTTC
T ss_pred -----CEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCCc--------ccCCEEEEechhccC-CCcc
Confidence 378889999999998552 334 49999999999888877653 257899999999995 9999
Q ss_pred eEEEeeCchhhhhhhc-CCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHH
Q 037144 310 CCLWVKDPSCLLSTLS-TNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVA-NLRNFIRSHVGMA 386 (502)
Q Consensus 310 g~~~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~la 386 (502)
|+++++++.. ..... ..+.|+...... .... .. ++-. .....+..+++.+-.+ |++++.++..+++
T Consensus 202 g~l~~~~~~~-~~~~~~~~p~~~~~~~~~------~~~~---~~-~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~ 270 (361)
T 3m5u_A 202 SCIFIRKDML-ERSKNKQIPSMLNYLTHA------ENQS---LF-NTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKA 270 (361)
T ss_dssp EEEEEEHHHH-HHHHTCCCCGGGCHHHHH------HTTT---CS-SCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred EEEEEcHHHH-hhhcCCCCCceeehHHHh------hcCC---CC-CCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 9999986643 21111 122332110000 0000 00 0101 1234566777777667 7999999999999
Q ss_pred HHHHHHHhcCCCe-EEecCC--C-eeEEEEEeec-CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE
Q 037144 387 KLFERLVTSDKRF-EVAFPR--N-FSLVCFRVTP-SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV 461 (502)
Q Consensus 387 ~~l~~~l~~~~~~-~l~~~~--~-~~~v~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 461 (502)
+++++.|++++++ ++..++ . ..+++|.++. ... ...+...|.++|..
T Consensus 271 ~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~----------------------------~~~~~~~L~~~gI~ 322 (361)
T 3m5u_A 271 TMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKDL----------------------------EPLFVKEAEEAGMI 322 (361)
T ss_dssp HHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSCTTH----------------------------HHHHHHHHHHTTEE
T ss_pred HHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCchhh----------------------------hHHHHHHHHHCCCE
Confidence 9999999999876 664332 2 3478898864 111 12455667777864
Q ss_pred EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 462 FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 462 ~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
...+ ....+.+|+|++++ ++++|||+++++|+++.++
T Consensus 323 ~~~g--~~~~g~iRiS~~~~-~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 323 GLKG--HRILGGIRASIYNA-LNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp CCBC--CTTTCSEEEECCTT-SCHHHHHHHHHHHHHHHHH
T ss_pred EecC--CCccCeEEEEccCC-CCHHHHHHHHHHHHHHHHh
Confidence 3222 12224599999765 6777999999999998764
No 62
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.92 E-value=9.2e-24 Score=217.51 Aligned_cols=340 Identities=11% Similarity=0.023 Sum_probs=223.1
Q ss_pred HHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144 89 VAGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK 167 (502)
Q Consensus 89 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~ 167 (502)
++..+.+.+...+... ...|...++..++++.+.+++... |.+... ...++|+|||+|+..++.+.++
T Consensus 72 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~~-----~~v~~t~g~t~al~~~~~~l~~----- 140 (427)
T 3dyd_A 72 TDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-EAPLEA-----KDVILTSGCSQAIDLCLAVLAN----- 140 (427)
T ss_dssp CCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBT-TBCCCG-----GGEEEESSHHHHHHHHHHHHCC-----
T ss_pred CCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhc-CCCCCh-----HHEEEecCcHHHHHHHHHHhcC-----
Confidence 3444555555544332 235655566777887776666544 432111 2689999999999888777643
Q ss_pred hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
+++.|+++..+|..+...++..|+ +++.+|.++.+++.+|+++|++++++. +.+|+++.++|++|
T Consensus 141 ------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG 205 (427)
T 3dyd_A 141 ------PGQNILVPRPGFSLYKTLAESMGI---EVKLYNLLPEKSWEIDLKQLEYLIDEK------TACLIVNNPSNPCG 205 (427)
T ss_dssp ------TTCEEEEEESCCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHSSCCTT------EEEEEEESSCTTTC
T ss_pred ------CCCEEEEcCCCchhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHhccC------CCEEEEECCCCCCC
Confidence 567888999999999999999999 999999875446789999999988653 34788888999999
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCC-eeEEccCCcCCC-CCcceEEEeeCch----
Q 037144 248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVD-SFSFNPHKWLFT-TLDCCCLWVKDPS---- 318 (502)
Q Consensus 248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aD-si~~~~hK~l~~-p~~~g~~~~r~~~---- 318 (502)
.+-| +++|+++|++||+++++|++|+++............--...+ .++.++||.++. ...+|+++++++.
T Consensus 206 ~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~ 285 (427)
T 3dyd_A 206 SVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFG 285 (427)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSH
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhH
Confidence 9999 999999999999999999999876543221111110001223 345689998654 3557898887641
Q ss_pred -hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144 319 -CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK 397 (502)
Q Consensus 319 -~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 397 (502)
.+.+.+........ +........+..+++....+++.++.++..++++++.+.|+++|
T Consensus 286 ~~i~~~l~~~~~~~~---------------------~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 344 (427)
T 3dyd_A 286 NEIRDGLVKLSQRIL---------------------GPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIP 344 (427)
T ss_dssp HHHHHHHHHHHHHHC---------------------CSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHhccC---------------------CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 11111110000000 00011223334445444577888999999999999999999999
Q ss_pred CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEE
Q 037144 398 RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRF 476 (502)
Q Consensus 398 ~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~ 476 (502)
++++..+....++.+.+...... + .....++.+++. +.|.++.++..+....++|+
T Consensus 345 g~~~~~p~~g~~~~~~l~~~~~~-------------------~----~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRi 401 (427)
T 3dyd_A 345 GLRPVRPSGAMYLMVGIEMEHFP-------------------E----FENDVEFTERLVAEQSVHCLPATCFEYPNFIRV 401 (427)
T ss_dssp TEEEECCSBTTEEEEEECGGGCT-------------------T----CSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEE
T ss_pred CceecCCCeeEEEEEecCHhhcC-------------------C----CCCHHHHHHHHHHHCCEEEECCcccCCCCeEEE
Confidence 99887544444444455321000 0 000234555554 55765555444555679999
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 477 AAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 477 ~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+++ +++++|+++++.|.++.++
T Consensus 402 s~~---~~~e~i~~~l~~l~~~l~~ 423 (427)
T 3dyd_A 402 VIT---VPEVMMLEACSRIQEFCEQ 423 (427)
T ss_dssp ESC---SCHHHHHHHHHHHHHHHHH
T ss_pred EEC---CCHHHHHHHHHHHHHHHHH
Confidence 975 5778999999999988764
No 63
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.92 E-value=4.3e-24 Score=216.19 Aligned_cols=329 Identities=10% Similarity=0.042 Sum_probs=219.5
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+......|... ..++++++.+++++.+|.+... ...++|+||++++..++.+...
T Consensus 39 ~~~v~~a~~~~~~~~~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~l~~------- 104 (383)
T 3kax_A 39 PQPIQTALKKRIEHPIFGYTLP--PENIGDIICNWTKKQYNWDIQK-----EWIVFSAGIVPALSTSIQAFTK------- 104 (383)
T ss_dssp CHHHHHHHHHHHHSCCCCCCCC--CTTHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHCC-------
T ss_pred CHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHHHHHHhCCCCCh-----hhEEEcCCHHHHHHHHHHHhCC-------
Confidence 3445555555554433344333 5678899999999999943211 2689999999999888776643
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKS-SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~-~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|+++..+|.++...++..|. +++.+|++++ +++.+|+++|+++++++ +.+|+++.++|++|.
T Consensus 105 ----~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~ 171 (383)
T 3kax_A 105 ----ENESVLVQPPIYPPFFEMVTTNNR---QLCVSPLQKQNDTYAIDFEHLEKQFQQG------VKLMLLCSPHNPIGR 171 (383)
T ss_dssp ----TTCEEEECSSCCHHHHHHHHHTTC---EEEECCCEEETTEEECCHHHHHHHHTTT------CCEEEEESSBTTTTB
T ss_pred ----CCCEEEEcCCCcHHHHHHHHHcCC---EEEeccceecCCcEEEcHHHHHHHhCcC------CeEEEEeCCCCCCCc
Confidence 567899999999999999999999 9999998642 24679999999999433 336777889999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCC---CCCCeeEEccCCcCC-CCCcceEEEeeCchhhh
Q 037144 249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV---ECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLL 321 (502)
Q Consensus 249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~---~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~ 321 (502)
+-| +++|+++|++||+++++|++|+.+............-. ...+.++.++||+++ .+...|++++.++....
T Consensus 172 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 251 (383)
T 3kax_A 172 VWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQ 251 (383)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHH
T ss_pred CcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHH
Confidence 966 56666679999999999999977554321111111100 134477888999997 44567888775554332
Q ss_pred hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-CCC
Q 037144 322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTS-DKR 398 (502)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~-~~~ 398 (502)
........+... ....+..+++...+ +.+.++++.++..++++++.+.|++ +|+
T Consensus 252 ~~~~~~~~~~~~-----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 308 (383)
T 3kax_A 252 AFTSIQYRQGFH-----------------------GLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPT 308 (383)
T ss_dssp HHHHHHHHTTCC-----------------------CCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHhhcccC-----------------------CCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 111100000000 01233334444433 4566888889999999999999988 789
Q ss_pred eEEecCCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEE
Q 037144 399 FEVAFPRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVL 474 (502)
Q Consensus 399 ~~l~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~l 474 (502)
+++. ++..+++. +.+...+. ...++.+.|. +.|..+.++..+. +..++
T Consensus 309 ~~~~-~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~i 360 (383)
T 3kax_A 309 LSVM-KPEGSFLLWIDCSALNL---------------------------SQDERTKLLEEKGKIIVEPGEKYGLGGEEHI 360 (383)
T ss_dssp CEEC-CCSBSSEEEEECGGGCC---------------------------CHHHHHHHHHHTSCEECEESGGGCTTCTTEE
T ss_pred ceEe-cCCceEEEEEEccccCC---------------------------CHHHHHHHHHhhCCEEeECchhhcCCCCCeE
Confidence 9887 44555554 44432110 0345677776 4676544432222 35789
Q ss_pred EEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 475 RFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 475 R~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
|++++ +++++|+++++.|+++.
T Consensus 361 Ri~~~---~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 361 GINIG---CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp EEECS---SCHHHHHHHHHHHHHHH
T ss_pred EEEEc---CCHHHHHHHHHHHHHHh
Confidence 99986 46789999999998864
No 64
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.92 E-value=1.1e-23 Score=214.09 Aligned_cols=331 Identities=11% Similarity=0.017 Sum_probs=220.7
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHH-HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVE-LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~-le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
+..+.+.+...++.....|... ..+ +++++.+|+.+.+|.+... ...++|+|+++++..++.+...
T Consensus 43 ~~~v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~-----~~v~~t~g~~~al~~~~~~l~~------ 109 (390)
T 1d2f_A 43 APCIIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAIDS-----QTVVYGPSVIYMVSELIRQWSE------ 109 (390)
T ss_dssp CHHHHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCCG-----GGEEEESCHHHHHHHHHHHSSC------
T ss_pred CHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCCH-----HHEEEcCCHHHHHHHHHHHhcC------
Confidence 4456666666665433445443 567 8999999999988853221 2689999999999877776532
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKS-SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~-~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
+++.|++...+|.++..+++..|. +++.+|++++ +++.+|+++|++++++. .+.+|+++.++|++|
T Consensus 110 -----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG 176 (390)
T 1d2f_A 110 -----TGEGVVIHTPAYDAFYKAIEGNQR---TVMPVALEKQADGWFCDMGKLEAVLAKP-----ECKIMLLCSPQNPTG 176 (390)
T ss_dssp -----TTCEEEEEESCCHHHHHHHHHTTC---EEEEEECEECSSSEECCHHHHHHHHTST-----TEEEEEEESSCTTTC
T ss_pred -----CCCEEEEcCCCcHHHHHHHHHCCC---EEEEeecccCCCccccCHHHHHHHhccC-----CCeEEEEeCCCCCCC
Confidence 567888888999999999999999 9999998753 24679999999998641 244777788999999
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CC-CeeEEccCCcCCC-CCcceEEEeeCchhhh
Q 037144 248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-CV-DSFSFNPHKWLFT-TLDCCCLWVKDPSCLL 321 (502)
Q Consensus 248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~a-Dsi~~~~hK~l~~-p~~~g~~~~r~~~~l~ 321 (502)
.+-| +++|+++|++||+++++|++|+.+......... +..+. .. |. ..++||+++. ...+|+++++++....
T Consensus 177 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~ 254 (390)
T 1d2f_A 177 KVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIP-WSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRD 254 (390)
T ss_dssp CCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCC-GGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHH
T ss_pred cCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcC-HHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHH
Confidence 9966 889999999999999999999876543211111 11111 22 55 8889999973 3457888886554332
Q ss_pred hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-CCC
Q 037144 322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTS-DKR 398 (502)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~-~~~ 398 (502)
.+...... .. +.. ....+..+++...+ +.+.+++..++..++++++.+.|++ +|+
T Consensus 255 -~~~~~~~~--~~----------------~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 312 (390)
T 1d2f_A 255 -AYLSALKG--RD----------------GLS---SPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPE 312 (390)
T ss_dssp -HHHHHHHT--TS----------------CCC---SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred -HHHHHHhh--hc----------------ccC---CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 22110000 00 000 01223333333322 4567888888999999999999988 788
Q ss_pred eEEecCCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEE
Q 037144 399 FEVAFPRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVL 474 (502)
Q Consensus 399 ~~l~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~l 474 (502)
+++. ++..+++. +.+...+. + ..++.+.+. +.|..+.++..+. +..++
T Consensus 313 ~~~~-~~~~~~~~~~~~~~~~~-------------------------~--~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~ 364 (390)
T 1d2f_A 313 LNWQ-IPQSTYLAWLDLRPLNI-------------------------D--DNALQKALIEQEKVAIMPGYTYGEEGRGFV 364 (390)
T ss_dssp CCCC-CCSBCSEEEEECGGGCC-------------------------C--HHHHHHHHHHTTCEECEEGGGGCGGGTTEE
T ss_pred CEEe-cCCccEEEEEEccccCC-------------------------C--HHHHHHHHHHHcCEEeeCccccCCCCCCeE
Confidence 8765 45555554 44432100 0 245677777 4676544433332 34689
Q ss_pred EEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 475 RFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 475 R~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
|++++. ++++++++++.|.++.++
T Consensus 365 Ris~~~---~~~~l~~~l~~l~~~l~~ 388 (390)
T 1d2f_A 365 RLNAGC---PRSKLEKGVAGLINAIRA 388 (390)
T ss_dssp EEECCS---CHHHHHHHHHHHHHHHHH
T ss_pred EEEecC---CHHHHHHHHHHHHHHHHh
Confidence 999874 467999999999988764
No 65
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.92 E-value=3.5e-23 Score=211.04 Aligned_cols=300 Identities=11% Similarity=0.069 Sum_probs=201.9
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
....++.+.+++++|.+ . .+++++||+++..++.+... ++++|+++...|.++..+++..
T Consensus 90 ~~~~~l~~~la~~~g~~-~--------~i~~~sGs~a~~~~~~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~ 149 (401)
T 1fc4_A 90 DSHKELEQKLAAFLGME-D--------AILYSSCFDANGGLFETLLG-----------AEDAIISDALNHASIIDGVRLC 149 (401)
T ss_dssp HHHHHHHHHHHHHHTCS-E--------EEEESCHHHHHHTTHHHHCC-----------TTCEEEEETTCCHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCC-c--------EEEeCChHHHHHHHHHHHcC-----------CCCEEEEcchhHHHHHHHHHHc
Confidence 34455667777888876 2 46667778899877666532 5678889999999999999989
Q ss_pred CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccc-c
Q 037144 196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA-G 274 (502)
Q Consensus 196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g-~ 274 (502)
|+ +++.+|. +|+++|++++++....+.++.+|+++.++|++|.+.|+++|.++|++||+++++|++|+ +
T Consensus 150 g~---~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g 219 (401)
T 1fc4_A 150 KA---KRYRYAN-------NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVG 219 (401)
T ss_dssp CS---EEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTT
T ss_pred CC---ceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECccccc
Confidence 98 8888762 48999999998654433346688889999999999999999999999999999999996 4
Q ss_pred cccc-CccchhhhcCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc
Q 037144 275 SACI-CPEFRHFIDGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI 352 (502)
Q Consensus 275 ~~~~-~~~~~~~~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~ 352 (502)
.... ...... ..++ .+.|+++.++||+++.+.+ |+++.+ +............|....
T Consensus 220 ~~~~~g~~~~~-~~~~~~~~di~~~s~sK~~~~~~g-G~~~~~-~~~~~~l~~~~~~~~~~~------------------ 278 (401)
T 1fc4_A 220 FVGENGRGSHE-YCDVMGRVDIITGTLGKALGGASG-GYTAAR-KEVVEWLRQRSRPYLFSN------------------ 278 (401)
T ss_dssp TSSTTSCCHHH-HTTCTTCCSEEEEESSSTTCSSSC-EEEEEC-HHHHHHHHHHCHHHHHSC------------------
T ss_pred ccCCCCCccHH-HcCCCcCCcEEEecchhhccCCCC-EEEEcC-HHHHHHHHHhCcCceeCC------------------
Confidence 3321 111111 1122 2579999999999965655 777764 443322211111121100
Q ss_pred cCCCCCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCC
Q 037144 353 TLCRRFRSLKLWVVIRNFGV-ANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGT 431 (502)
Q Consensus 353 ~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~ 431 (502)
....+.+++++..+.. +..+++.++..++++++.+.|++. ++++. ++..+++++.+..
T Consensus 279 ----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~--------------- 337 (401)
T 1fc4_A 279 ----SLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA-GFTLA-GADHAIIPVMLGD--------------- 337 (401)
T ss_dssp ----CCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC-CSSSSEEEEEEEC---------------
T ss_pred ----CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCCCEEEEEcCC---------------
Confidence 0122333333322211 114677888999999999999988 78776 5566777777642
Q ss_pred cccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE---CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 432 YDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV---GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.....++.+.|.++|..+...... .+..++|++++ ..++++++++++++|+++.++
T Consensus 338 -------------~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~ 396 (401)
T 1fc4_A 338 -------------AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMS-AAHTPEQITRAVEAFTRIGKQ 396 (401)
T ss_dssp -------------HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred -------------hHHHHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHH
Confidence 112346777787788643332211 23578999986 445777999999999998765
No 66
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.92 E-value=6.3e-24 Score=219.19 Aligned_cols=323 Identities=11% Similarity=0.051 Sum_probs=217.8
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCC----CCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC
Q 037144 107 DWISSPAAVELENIVMDWLGQMLDL----PKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD 182 (502)
Q Consensus 107 ~~~~~p~~~~le~~~~~~l~~l~g~----~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~ 182 (502)
.|....+..++++++.+++.+..|. +.+ .+++|+||++||..++.+.+. +++.|+++.
T Consensus 81 ~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~-------~v~~~~gg~~a~~~~~~~l~~-----------~gd~vl~~~ 142 (435)
T 3piu_A 81 LFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN-------HLVLTAGATSANETFIFCLAD-----------PGEAVLIPT 142 (435)
T ss_dssp HCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG-------GEEEEEHHHHHHHHHHHHHCC-----------TTCEEEEEE
T ss_pred ccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHH-------HEEEcCChHHHHHHHHHHhcC-----------CCCeEEECC
Confidence 3555556688999999999987662 332 689999999999888876643 567888899
Q ss_pred CCchhHHHHHH-HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHH
Q 037144 183 QTHCAFQKAAQ-IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDV 258 (502)
Q Consensus 183 ~~H~s~~~aa~-~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i 258 (502)
..|.++..++. ..|. +++.+|+++++++.+|+++|+++|++..+.+..+.+|+++.++|++|.+-| +++|+++
T Consensus 143 p~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~ 219 (435)
T 3piu_A 143 PYYPGFDRDLKWRTGV---EIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSF 219 (435)
T ss_dssp SCCTTHHHHTTTTTCC---EEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred CccccHHHHHHHhcCC---EEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHH
Confidence 99999988877 7888 999999986555789999999999886655556778889999999999844 6888899
Q ss_pred HHHhCCEEEeecccccccccCccch---hhhcCC--------CCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcC
Q 037144 259 AKQFGIWVHVDAAYAGSACICPEFR---HFIDGV--------ECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLST 326 (502)
Q Consensus 259 ~~~~g~~lhVDaA~g~~~~~~~~~~---~~~~~~--------~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~ 326 (502)
|++||+++++|++|+++.+...... ...... .....+..++||+++ .+..+|+++.+++... ..+..
T Consensus 220 ~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~-~~~~~ 298 (435)
T 3piu_A 220 VEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVV-AAATK 298 (435)
T ss_dssp HHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHH-HHHHH
T ss_pred HHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHH-HHHHH
Confidence 9999999999999987554322111 111100 112267789999997 4456788887655432 22211
Q ss_pred CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHH---HHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 327 NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV---VIRNFG--VANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 327 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g--~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
...+.. . .++...+ .+.... .+.+.+..++..++++++.+.|++. ++++
T Consensus 299 ~~~~~~----------------------~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 352 (435)
T 3piu_A 299 MSSFGL----------------------V---SSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GISC 352 (435)
T ss_dssp HGGGSC----------------------C---CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEE
T ss_pred HhhcCC----------------------C---CHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcc
Confidence 111110 0 1222222 222111 2345677788889999999999987 8888
Q ss_pred ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeE--CCEEEEEEEe
Q 037144 402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIV--GGIYVLRFAA 478 (502)
Q Consensus 402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lR~~~ 478 (502)
..+....++.+.+..... . .......++.+++.++ |..+.++..+ .+..++|+++
T Consensus 353 ~~~~~g~~~~~~l~~~~~--------------------~--~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~ 410 (435)
T 3piu_A 353 LNGNAGLFCWVDMRHLLR--------------------S--NTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCF 410 (435)
T ss_dssp CCCCSSSEEEEECGGGSS--------------------S--SSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEEC
T ss_pred cCCCeeEEEEEEcccccc--------------------c--CCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEe
Confidence 743333455555532100 0 0011234677777776 7654433322 3457899998
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHh
Q 037144 479 GNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 479 ~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+.. ++++|+++++.|.++.++
T Consensus 411 ~~~--~~e~i~~~l~~l~~~l~~ 431 (435)
T 3piu_A 411 ANL--PERTLDLAMQRLKAFVGE 431 (435)
T ss_dssp SSS--CHHHHHHHHHHHHHHHHH
T ss_pred eCC--CHHHHHHHHHHHHHHHHH
Confidence 533 678999999999988764
No 67
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.92 E-value=3.6e-24 Score=217.38 Aligned_cols=329 Identities=11% Similarity=0.045 Sum_probs=220.1
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCC-cEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNG-GGVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
+..+.+.+...++.....|...++..++++.+.+|+.+.+|.+... . ..++|+||++++..++.+...
T Consensus 45 ~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~-----~~~v~~~~g~~~a~~~~~~~~~~------ 113 (386)
T 1u08_A 45 PRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDA-----DSDITVTAGATEALYAAITALVR------ 113 (386)
T ss_dssp CHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCT-----TTTEEEESSHHHHHHHHHHHHCC------
T ss_pred CHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCCEEEcCChHHHHHHHHHHhCC------
Confidence 3456666665554333456555567899999999999998864221 2 589999999999887776532
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|+++...|.++..+++..|. +++.+|++.+ ++.+|+++|+++++++ +.+|+++.++|++|.
T Consensus 114 -----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~ 178 (386)
T 1u08_A 114 -----NGDEVICFDPSYDSYAPAIALSGG---IVKRMALQPP-HFRVDWQEFAALLSER------TRLVILNTPHNPSAT 178 (386)
T ss_dssp -----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECCTT-TCCCCHHHHHHHCCTT------EEEEEEESSCTTTCC
T ss_pred -----CCCEEEEeCCCchhHHHHHHHcCC---EEEEeecCcc-cCcCCHHHHHHhhccc------CEEEEEeCCCCCCCc
Confidence 567888888999999999999999 9999999753 4789999999998532 447778889999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhh
Q 037144 249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLS 322 (502)
Q Consensus 249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~ 322 (502)
+-| +++|+++|++||+|+++|++|+.+.+........ +.+....|.++.++||+++.| ..+|++++++ ... +
T Consensus 179 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~-~ 256 (386)
T 1u08_A 179 VWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA-PIS-A 256 (386)
T ss_dssp CCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH-HHH-H
T ss_pred cCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCH-HHH-H
Confidence 865 7899999999999999999998754422111111 000126789999999999743 3478888753 322 2
Q ss_pred hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
.+.....+.. ++ .+ ......+..+++. +.++++++.++..++++++.+.|++. ++++.
T Consensus 257 ~l~~~~~~~~-----------------~~--~~-~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 314 (386)
T 1u08_A 257 EIRKVHQYLT-----------------FS--VN-TPAQLALADMLRA-EPEHYLALPDFYRQKRDILVNALNES-RLEIL 314 (386)
T ss_dssp HHHHHHHHHT-----------------SS--CC-HHHHHHHHHHHHH-CTHHHHTHHHHHHHHHHHHHHHTTSS-SCEEC
T ss_pred HHHHHHHhhc-----------------cC--CC-hHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHHC-CCeec
Confidence 2211100000 00 00 0011222333433 35678888899999999999999987 88876
Q ss_pred cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeE----CCEEEEEEE
Q 037144 403 FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIV----GGIYVLRFA 477 (502)
Q Consensus 403 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~----~g~~~lR~~ 477 (502)
.+....++++.+..... ....++.+++. +.|..+.++..+ .+..++|++
T Consensus 315 ~~~~g~~~~~~~~~~~~--------------------------~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis 368 (386)
T 1u08_A 315 PCEGTYFLLVDYSAVST--------------------------LDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLC 368 (386)
T ss_dssp CCCBSSEEEEECTTTCC--------------------------SCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEE
T ss_pred CCCceEEEEEecCCCCC--------------------------CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEE
Confidence 44333456665532100 00235666665 457654443333 245789999
Q ss_pred ecCCCCcHHHHHHHHHHHHH
Q 037144 478 AGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 478 ~~~~~t~~~di~~~~~~l~~ 497 (502)
++ +++++|+++++.|++
T Consensus 369 ~~---~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 369 FA---KKESTLLAAAERLRQ 385 (386)
T ss_dssp CC---SCHHHHHHHHHHHTT
T ss_pred Ec---CCHHHHHHHHHHHhh
Confidence 86 367899999998854
No 68
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.92 E-value=1.4e-23 Score=216.29 Aligned_cols=355 Identities=12% Similarity=0.126 Sum_probs=222.5
Q ss_pred CCcccccCCCCCCHHHHHHHHHHhhcC----CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchH
Q 037144 76 SPNYFAYFPATSSVAGIVGEMLSSGFN----VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCE 151 (502)
Q Consensus 76 ~p~~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~ 151 (502)
...||++..+++.++.++ +.+...+. .....|..++...++..++++++++++|.+.+ .+++|+|||+
T Consensus 18 ~~~~Ld~~~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~ 89 (432)
T 3a9z_A 18 RKVYMDYNATTPLEPEVI-QAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQ-------DIIFTSGGTE 89 (432)
T ss_dssp CCEECBTTTCCCCCHHHH-HHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESCHHH
T ss_pred CcEEeeCCccCCCCHHHH-HHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcC-------eEEEeCChHH
Confidence 345777765555555544 33333321 11223444556677888999999999998654 5899999999
Q ss_pred HHHHHHHHHHHHHHH---HhCcc------CC-CCeEEEeCCCCchhHHHHHH----HcCCCCCCEEEEecCCCCCcccCH
Q 037144 152 ALLCTLTAARDRVLK---KIGRE------NI-SKLVVYSSDQTHCAFQKAAQ----IVGIDRKNIRAIKTTKSSSYGLSA 217 (502)
Q Consensus 152 a~~~al~~a~~~~~~---~~~~~------~~-~~~~v~~s~~~H~s~~~aa~----~~Glg~~~v~~v~~~~~~~~~~d~ 217 (502)
|+..++.+....+.. +.|.. +. ....|+++...|.|+.++.. ..|. +++.+|+++. ++.+|+
T Consensus 90 a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~---~v~~v~~~~~-~~~~d~ 165 (432)
T 3a9z_A 90 SNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVA---EVTFVPVSKV-NGQVEV 165 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSC---EEEEECCCTT-TSSCCH
T ss_pred HHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCc---EEEEEecCcc-cCCcCH
Confidence 999888877532221 11100 00 12578889999999866543 3578 9999998752 468999
Q ss_pred HHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC----------CEEEeecccccccccCccchhhhc
Q 037144 218 ESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG----------IWVHVDAAYAGSACICPEFRHFID 287 (502)
Q Consensus 218 ~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g----------~~lhVDaA~g~~~~~~~~~~~~~~ 287 (502)
++|+++|+++ +.+|+++.++|++|.+.|+++|.++|+++| +|+|+|++|+.+....+ ....
T Consensus 166 ~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~-~~~~-- 236 (432)
T 3a9z_A 166 EDILAAVRPT------TCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVD-VEDL-- 236 (432)
T ss_dssp HHHHHTCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCC-HHHH--
T ss_pred HHHHHhccCC------ceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccC-hhhc--
Confidence 9999988643 458899999999999999999999999999 99999999976543322 1211
Q ss_pred CCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc-CCCCC-CchHHHH
Q 037144 288 GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT-LCRRF-RSLKLWV 365 (502)
Q Consensus 288 ~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~-~sr~~-~al~~~~ 365 (502)
++|++++++||+++ |. +|++++++..... ...+.+...... .... ++... ....+..
T Consensus 237 ---~~d~~~~s~~K~~g-~~-~G~~~~~~~~~~~---~~~~~~~~~~~~-------------~~~~~~~~~~~~~~a~~a 295 (432)
T 3a9z_A 237 ---GVDFLTIVGHKFYG-PR-IGALYVRGVGKLT---PLYPMLFGGGQE-------------RNFRPGTENTPMIAGLGK 295 (432)
T ss_dssp ---CCSEEEEEGGGTTC-CS-CEEEEETTBTTTB---CCCCSCCSSCGG-------------GGTSCSCCCHHHHHHHHH
T ss_pred ---CCCEEEEehhHhcC-Cc-ceEEEEccccccC---CcCceeecCCcc-------------ccccCCCcCHHHHHHHHH
Confidence 68999999999875 66 9999987653111 111111111000 0000 11111 1123334
Q ss_pred HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--cC----CCe-eEEEEEeecCcchhhhhhcccCCCccccccc
Q 037144 366 VIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA--FP----RNF-SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQF 438 (502)
Q Consensus 366 ~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~--~~----~~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (502)
+++.+ .++++++.++..++++++.+.|++++++++. .+ ... ++++|.+.....
T Consensus 296 al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 355 (432)
T 3a9z_A 296 AADLV-SENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQL------------------- 355 (432)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTC-------------------
T ss_pred HHHHH-HhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCC-------------------
Confidence 45443 4578889999999999999999886565443 22 122 367777754210
Q ss_pred chhHhhHHHHHHHHHHHH----hcCcEEEEee------e--ECC------EEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 439 SEEERTNEFNRELLESIN----VSGKVFMTHA------I--VGG------IYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 439 ~~~~~~~~~~~~l~~~l~----~~g~~~~~~~------~--~~g------~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
+ ...+.+.+. +.|..+.... . ..| ..++|+++. ..++++|++++++.|+++.+
T Consensus 356 -~-------~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~-~~~t~eei~~~~~~l~~~~~ 426 (432)
T 3a9z_A 356 -R-------GYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVG-RSTTRAEVDLIVQDLKQAVN 426 (432)
T ss_dssp -C-------HHHHHHHCSSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECC-TTCCHHHHHHHHHHHHHHHH
T ss_pred -c-------HHHHHHHhcCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcC-CCCCHHHHHHHHHHHHHHHH
Confidence 0 112222221 1111100000 0 001 258999986 55678899999999998765
Q ss_pred h
Q 037144 501 A 501 (502)
Q Consensus 501 ~ 501 (502)
+
T Consensus 427 ~ 427 (432)
T 3a9z_A 427 Q 427 (432)
T ss_dssp H
T ss_pred H
Confidence 4
No 69
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.92 E-value=4.6e-23 Score=212.21 Aligned_cols=327 Identities=11% Similarity=0.059 Sum_probs=218.1
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch
Q 037144 107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC 186 (502)
Q Consensus 107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~ 186 (502)
.|....+..++++.+.+++.+.+|.+... .....++|+|+++++..++.+.++ +++.|+++..+|.
T Consensus 78 ~Y~~~~g~~~lr~~la~~~~~~~g~~~~~---~~~~i~~~~G~~~ai~~~~~~~~~-----------~gd~Vl~~~p~y~ 143 (428)
T 1iay_A 78 NFQDYHGLPEFRKAIAKFMEKTRGGRVRF---DPERVVMAGGATGANETIIFCLAD-----------PGDAFLVPSPYYP 143 (428)
T ss_dssp HCCCTTCCHHHHHHHHHHHHHHTTTCSCC---CTTSCEEEEHHHHHHHHHHHHHCC-----------TTCEEEEESSCCT
T ss_pred CCCCCCCcHHHHHHHHHHHHHhcCCCCCC---ChhhEEEccChHHHHHHHHHHhCC-----------CCCeEEEccCCCc
Confidence 34433357889999999999988843100 002579999999999887776643 5678888889999
Q ss_pred hHHHHH-HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHh
Q 037144 187 AFQKAA-QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQF 262 (502)
Q Consensus 187 s~~~aa-~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~ 262 (502)
++...+ ...|+ +++.+|.+.++++.+|+++|++++++....+..+.+|+++.++|++|.+.| +++|+++|++|
T Consensus 144 ~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~ 220 (428)
T 1iay_A 144 AFNRDLRWRTGV---QLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQH 220 (428)
T ss_dssp THHHHTTTTTCC---EEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTT
T ss_pred chHHHHHHhcCC---EEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHC
Confidence 887754 46788 999999875445789999999999875444445667888899999999999 99999999999
Q ss_pred CCEEEeecccccccccCcc---chhhhcC----CCCCC--eeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCccccc
Q 037144 263 GIWVHVDAAYAGSACICPE---FRHFIDG----VECVD--SFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLK 332 (502)
Q Consensus 263 g~~lhVDaA~g~~~~~~~~---~~~~~~~----~~~aD--si~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~ 332 (502)
|+++++|++|+++.+.... ....... .-..| .+..++||+++.| ..+|+++..++.... .+.....+.
T Consensus 221 ~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~-~~~~~~~~~- 298 (428)
T 1iay_A 221 NIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVN-CARKMSSFG- 298 (428)
T ss_dssp TCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHH-HHHHHHTTS-
T ss_pred CeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHH-HHHHHHhcc-
Confidence 9999999999875442211 1111110 00267 6788999999744 457888875554332 221100000
Q ss_pred CccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 037144 333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-----VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNF 407 (502)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-----~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~ 407 (502)
+ ...+...++...+. .+.+++..++..++++++.+.|+++ ++++..+...
T Consensus 299 ------------------~------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g 353 (428)
T 1iay_A 299 ------------------L------VSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCLKNNAG 353 (428)
T ss_dssp ------------------C------CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSS
T ss_pred ------------------c------CCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCee
Confidence 0 02233333333332 2356778888899999999999988 7876533244
Q ss_pred eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC--CEEEEEEEecCCCCc
Q 037144 408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--GIYVLRFAAGNSMTM 484 (502)
Q Consensus 408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lR~~~~~~~t~ 484 (502)
+++++.+..... .. ......++.++|.++ |..+..+..+. +..++|++++ . .+
T Consensus 354 ~~~~~~~~~~~~-------------------~~---~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~-~-~~ 409 (428)
T 1iay_A 354 LFCWMDLRPLLR-------------------ES---TFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA-N-MD 409 (428)
T ss_dssp SEEEEECGGGCS-------------------SS---SHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS-S-SC
T ss_pred EEEEEechhhcC-------------------CC---chhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-c-CC
Confidence 456666542100 00 011234677888776 76544433332 2468999986 3 57
Q ss_pred HHHHHHHHHHHHHHHHh
Q 037144 485 ESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 485 ~~di~~~~~~l~~~~~~ 501 (502)
++++++++++|+++.++
T Consensus 410 ~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 410 DGTVDIALARIRRFVGV 426 (428)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 78999999999988764
No 70
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.92 E-value=1.8e-23 Score=213.57 Aligned_cols=334 Identities=12% Similarity=0.096 Sum_probs=219.1
Q ss_pred HHHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 037144 89 VAGIVGEMLSSGFNVV---GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL 165 (502)
Q Consensus 89 ~~~~~~~~l~~~~n~~---~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~ 165 (502)
++..+.+.+...+... .. |...++..++++.+.+|+.+.+|.+... ...++|+|||+|+..++.+++.
T Consensus 50 ~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~-----~~v~~t~g~t~a~~~~~~~~~~--- 120 (407)
T 2zc0_A 50 PRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSP-----ENIVITIGGTGALDLLGRVLID--- 120 (407)
T ss_dssp CHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCG-----GGEEEESHHHHHHHHHHHHHCC---
T ss_pred CHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCc-----ceEEEecCHHHHHHHHHHHhcC---
Confidence 3445555555544322 23 5555567899999999999988853221 2689999999999888877643
Q ss_pred HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEE-EEecCCc
Q 037144 166 KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFL-CATVGTT 244 (502)
Q Consensus 166 ~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~V-v~t~gtt 244 (502)
+++.|+++..+|.++..+++..|+ +++.+|+++ + .+|+++|++++++....+..+.+| +.+.++|
T Consensus 121 --------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~--~-~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~n 186 (407)
T 2zc0_A 121 --------PGDVVITENPSYINTLLAFEQLGA---KIEGVPVDN--D-GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQN 186 (407)
T ss_dssp --------TTCEEEEEESCCHHHHHHHHTTTC---EEEEEEEET--T-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCT
T ss_pred --------CCCEEEEeCCChHHHHHHHHHcCC---EEEEcccCC--C-CCCHHHHHHHHHhhhcccCCceEEEECCCCCC
Confidence 567788888999999999999999 999999875 2 399999999997432222234455 5677899
Q ss_pred cccccCChh---HHHHHHHHhCCEEEeecccccccccCccchhhhcCC--CCCCeeEEccCCcCCCCCcceEEEeeCchh
Q 037144 245 AITAVDPLK---PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV--ECVDSFSFNPHKWLFTTLDCCCLWVKDPSC 319 (502)
Q Consensus 245 ~~G~idpl~---eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~--~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~ 319 (502)
++|.+.|++ +|+++|++||+++|+|++|+.+.+....... +..+ .+.+.+..++||+++....+|+++++ +..
T Consensus 187 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~ 264 (407)
T 2zc0_A 187 PMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVP-LKALDNEGRVIVAGTLSKVLGTGFRIGWIIAE-GEI 264 (407)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCC-GGGGCSSCCEEEEEESTTTTCTTSCCEEEECC-HHH
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCC-hhhcCCCCCEEEEcccccccCCCcceEEEecC-HHH
Confidence 999998887 9999999999999999999886542211111 1111 12335677899999833458888875 333
Q ss_pred hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--c--H-HHHHHHHHHHHHHHHHHHHHHh
Q 037144 320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--G--V-ANLRNFIRSHVGMAKLFERLVT 394 (502)
Q Consensus 320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g--~-~g~~~~~~~~~~la~~l~~~l~ 394 (502)
. +.+....... +. ....+..+++...+ + . +.++++.++..++++++.+.|+
T Consensus 265 ~-~~~~~~~~~~-------------------~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 320 (407)
T 2zc0_A 265 L-KKVLMQKQPI-------------------DF----CAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALE 320 (407)
T ss_dssp H-HHHHHHHTTT-------------------TS----SSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHhh-------------------cC----CCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2221100000 00 01222223332222 2 2 4566777888899999999998
Q ss_pred c-CCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC---
Q 037144 395 S-DKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--- 469 (502)
Q Consensus 395 ~-~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--- 469 (502)
+ .|++++..+....++++.++.. . + ..++.+.|.++ |..+.++..+.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~-~-------------------------~--~~~l~~~l~~~~gi~v~~g~~~~~~~ 372 (407)
T 2zc0_A 321 NHLPNAEFTKPIAGMFVMFFLPEG-A-------------------------D--GISFANELMEREGVVVVPGKPFYTDE 372 (407)
T ss_dssp HHCTTSCBCCCSBSSEEEEECSTT-C-------------------------C--HHHHHHHHHHHTCEECBCSGGGCSSS
T ss_pred HhCCCCEEecCCCcEEEEEEcCCC-C-------------------------C--HHHHHHHHHHhCCeEEECchhccCCC
Confidence 7 5777765444444566665321 1 0 24567777777 76443332221
Q ss_pred -CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 470 -GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 470 -g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+..++|++++.. ++++|+++++.|.++.++
T Consensus 373 ~~~~~iRis~~~~--~~~~i~~~~~~l~~~l~~ 403 (407)
T 2zc0_A 373 SGKNAIRLNFSRP--SKEEIPIGIKKLAKLYKE 403 (407)
T ss_dssp CCTTEEEEECSSS--CTTHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEeCCC--CHHHHHHHHHHHHHHHHH
Confidence 346899998754 566999999999987754
No 71
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.92 E-value=1.4e-23 Score=213.97 Aligned_cols=300 Identities=11% Similarity=0.035 Sum_probs=208.5
Q ss_pred hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH
Q 037144 113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA 192 (502)
Q Consensus 113 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa 192 (502)
+..++.+++.+++++++|.+ ..++|+|||+|+..++.+... +++.|+++...|.++..++
T Consensus 85 g~~~~~~~l~~~la~~~g~~---------~v~~~~ggt~a~~~~~~~~~~-----------~gd~V~~~~p~~~~~~~~~ 144 (398)
T 3a2b_A 85 GTLDIHVELEEKLSAYVGKE---------AAILFSTGFQSNLGPLSCLMG-----------RNDYILLDERDHASIIDGS 144 (398)
T ss_dssp CCCHHHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHSSC-----------TTCEEEEETTCCHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEECCccCHHHHHHH
Confidence 44567788999999999864 479999999999888776643 6778999999999999999
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
+..|. +++.+|+ +|+++|++++++... ..+.+|+++.++|++|.+.|+++|.++|++||+++++|++|
T Consensus 145 ~~~g~---~~~~v~~-------~d~~~l~~~l~~~~~--~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~ 212 (398)
T 3a2b_A 145 RLSFS---KVIKYGH-------NNMEDLRAKLSRLPE--DSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAH 212 (398)
T ss_dssp HHSSS---EEEEECT-------TCHHHHHHHHHTSCS--SSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTT
T ss_pred HHcCC---ceEEeCC-------CCHHHHHHHHHhhcc--CCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCC
Confidence 99999 8888875 589999999975321 13557888889999999999999999999999999999999
Q ss_pred ccccccCccchhh--hcCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCc
Q 037144 273 AGSACICPEFRHF--IDGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKD 349 (502)
Q Consensus 273 g~~~~~~~~~~~~--~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 349 (502)
+.+.+. ...... ..++ +++|+++.++||+++ |.| |+++.+ +............+....
T Consensus 213 ~~~~~~-~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~G-G~~~~~-~~~~~~l~~~~~~~~~~~--------------- 273 (398)
T 3a2b_A 213 SLGVIG-HKGAGTASHFGLNDDVDLIMGTFSKSLA-SLG-GFVAGD-ADVIDFLKHNARSVMFSA--------------- 273 (398)
T ss_dssp TTTTSS-GGGCCHHHHHTCGGGCSEEEEESSSTTC-SSC-EEEEEC-HHHHHHHHHHCHHHHSSB---------------
T ss_pred cccccC-CCCCchHhhcCCCcCCeEEEeccccccc-CCC-cEEEeC-HHHHHHHHHhcccceecC---------------
Confidence 765431 111111 1122 247999999999998 545 777764 333222111111121110
Q ss_pred ccccCCCCCCch-HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhccc
Q 037144 350 WQITLCRRFRSL-KLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYK 428 (502)
Q Consensus 350 ~~~~~sr~~~al-~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~ 428 (502)
+...... .+..+++.+ +.++++.++..++++++.+.|+++ ++++. ++..+++++.++.
T Consensus 274 -----~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~~~~~~------------ 332 (398)
T 3a2b_A 274 -----SMTPASVASTLKALEII--QNEPEHIEKLWKNTDYAKAQLLDH-GFDLG-ATESPILPIFIRS------------ 332 (398)
T ss_dssp -----CCCHHHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHHHHHHHT-TCCBC-SCCSSEEEEECCC------------
T ss_pred -----CCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHhc-CCCcC-CCCCCEEEEEcCC------------
Confidence 0000111 223444442 335678888999999999999988 78776 4555666666532
Q ss_pred CCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC---CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 429 NGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG---GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.....++.++|.++|..+.++..+. +..++|++++. .++++++++++++|+++.++
T Consensus 333 ----------------~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~-~~~~e~i~~~~~~l~~~l~~ 391 (398)
T 3a2b_A 333 ----------------NEKTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMA-THTYDQIDEAIEKMVKVFKQ 391 (398)
T ss_dssp ----------------HHHHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECCT-TCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------HHHHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEeC-CCCHHHHHHHHHHHHHHHHH
Confidence 1124567788888886544332221 35789999864 35677999999999998765
No 72
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.92 E-value=1.4e-23 Score=216.59 Aligned_cols=346 Identities=10% Similarity=0.011 Sum_probs=221.5
Q ss_pred HHHHHHHHhhcCCCC-cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHH--HHHHHH
Q 037144 91 GIVGEMLSSGFNVVG-LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR--DRVLKK 167 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~-~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~--~~~~~~ 167 (502)
..+.+.+...+.... ..|....+..++++.+.+++.+.+|.+... ...++|+|||+++..++.+.. .
T Consensus 60 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~-----~~i~~t~g~t~al~~~~~~l~~~~----- 129 (437)
T 3g0t_A 60 QIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPA-----RACVPTVGSMQGCFVSFLVANRTH----- 129 (437)
T ss_dssp HHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHTTSC-----
T ss_pred HHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCc-----ccEEEeCCHHHHHHHHHHHHhcCC-----
Confidence 344455544443222 445555556889999999999988875321 268999999999988877664 3
Q ss_pred hCccCCCCe--EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144 168 IGRENISKL--VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245 (502)
Q Consensus 168 ~~~~~~~~~--~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~ 245 (502)
+++ .|+++..+|.++..+++..|+ +++.+|+++ +++.+|+++|+++++.. .+.+|+++.++|+
T Consensus 130 ------~gd~~~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~-~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~np 194 (437)
T 3g0t_A 130 ------KNREYGTLFIDPGFNLNKLQCRILGQ---KFESFDLFE-YRGEKLREKLESYLQTG-----QFCSIIYSNPNNP 194 (437)
T ss_dssp ------TTCSCCEEEEESCCHHHHHHHHHHTC---CCEEEEGGG-GCTTHHHHHHHHHHTTT-----CCCEEEEESSCTT
T ss_pred ------CCCccEEEEeCCCcHhHHHHHHHcCC---EEEEEeecC-CCCccCHHHHHHHHhcC-----CceEEEEeCCCCC
Confidence 456 788888999999999999999 999999974 34689999999999321 1337778889999
Q ss_pred ccccCC---hhHHHHHHHHhCCEEEeecccccccccCccch-------hhhcCCCCCCeeEEccCCcCC-CCCcceEEEe
Q 037144 246 ITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFR-------HFIDGVECVDSFSFNPHKWLF-TTLDCCCLWV 314 (502)
Q Consensus 246 ~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~-------~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~ 314 (502)
+|.+-| +++|+++|++||+++++|++|+.+.+...... ..+.+....+.++.++||+++ .+..+|++++
T Consensus 195 tG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 274 (437)
T 3g0t_A 195 TWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMI 274 (437)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEE
T ss_pred CCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEE
Confidence 999976 77789999999999999999986544210000 111222356688889999997 4456788877
Q ss_pred eCchhhhhhhc-CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHH--H---HHHHHHHHHHHHHH
Q 037144 315 KDPSCLLSTLS-TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVA--N---LRNFIRSHVGMAKL 388 (502)
Q Consensus 315 r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~--g---~~~~~~~~~~la~~ 388 (502)
++ ......+. ....+....... ... .......+-....+..+++...+... + +.++.++..+++++
T Consensus 275 ~~-~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 346 (437)
T 3g0t_A 275 SG-KLYEREYPDLEESFGRLRFGE-----ALS--SSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARI 346 (437)
T ss_dssp CH-HHHHCBCGGGHHHHSCSBHHH-----HHH--TTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred CH-HHhhhhhhcccccccccchhH-----HHH--HHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHH
Confidence 53 22220100 000000000000 000 00000000011233444444443222 2 78889999999999
Q ss_pred HHHHHhcCCCeEEe------cC-CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE
Q 037144 389 FERLVTSDKRFEVA------FP-RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV 461 (502)
Q Consensus 389 l~~~l~~~~~~~l~------~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 461 (502)
+.+.|+++ ++++. .+ ....++++.+.+.. ..++.+.|.++|..
T Consensus 347 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~l~~~L~~~gi~ 396 (437)
T 3g0t_A 347 MKKMFLDN-GFNIVYDKDGNEPLADGFYFTVGYKGMD-----------------------------SSKLIEKFVRYGMC 396 (437)
T ss_dssp HHHHHHTT-TEEESSCEETTEECCSSSEEEEEETTCC-----------------------------HHHHHHHHHHTTEE
T ss_pred HHHHHHHc-CCEEeccccCCCCCceeEEEEEecCCCC-----------------------------HHHHHHHHHHcCeE
Confidence 99999998 89887 34 44445555554211 24567777777865
Q ss_pred EEEeeeECC--EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 462 FMTHAIVGG--IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 462 ~~~~~~~~g--~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+.+...+.. ..++|++++ .. ++++|++++++|+++.++
T Consensus 397 v~~~~~~~~~~~~~iRis~~-~~-~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 397 AITLKTTGSKRNEAMRICTS-LL-PESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp CEESTTTTCCCTTCEEEECS-SS-CGGGHHHHHHHHHHHHHH
T ss_pred EeeccccCCCCCCEEEEEEe-cC-CHHHHHHHHHHHHHHHhc
Confidence 443322211 157999987 33 667999999999988754
No 73
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.92 E-value=6.8e-23 Score=208.06 Aligned_cols=332 Identities=14% Similarity=0.096 Sum_probs=210.1
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC
Q 037144 93 VGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN 172 (502)
Q Consensus 93 ~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~ 172 (502)
+.+.+...+......|..++...++++. +++++|.+. .+++++||+|+..++.+.+-.
T Consensus 19 ~~~a~~~~l~~~~~~~~~~~~~~~l~~~----la~~~~~~~---------~i~~~sGt~al~~~l~~l~~~--------- 76 (388)
T 1b9h_A 19 ERNGLVRALEQGQWWRMGGDEVNSFERE----FAAHHGAAH---------ALAVTNGTHALELALQVMGVG--------- 76 (388)
T ss_dssp HHHHHHHHHHTSCCBTTTCSHHHHHHHH----HHHHTTCSE---------EEEESCHHHHHHHHHHHTTCC---------
T ss_pred HHHHHHHHHHcCCeeecCCHHHHHHHHH----HHHHhCCCe---------EEEeCCHHHHHHHHHHHcCCC---------
Confidence 4444444443322334455555666655 666777652 345555699998887765211
Q ss_pred CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCCh
Q 037144 173 ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPL 252 (502)
Q Consensus 173 ~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl 252 (502)
+++.|+++..+|.++..+++..|+ +++.+|++++ ++.+|+++|+++|++++ .+|+ +++++|.+.|+
T Consensus 77 -~gd~Vi~~~~~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~i~~~~------~~v~---~~n~tG~~~~l 142 (388)
T 1b9h_A 77 -PGTEVIVPAFTFISSSQAAQRLGA---VTVPVDVDAA-TYNLDPEAVAAAVTPRT------KVIM---PVHMAGLMADM 142 (388)
T ss_dssp -TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCTT-TCCBCHHHHHHHCCTTE------EEEC---CBCGGGCCCCH
T ss_pred -CcCEEEECCCccHHHHHHHHHcCC---EEEEEecCCC-cCCCCHHHHHHhcCcCc------eEEE---EeCCccCcCCH
Confidence 567889999999999999999999 9999999863 47899999999986432 2444 78889999999
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchh--hhhhhcCCccc
Q 037144 253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSC--LLSTLSTNPQY 330 (502)
Q Consensus 253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~--l~~~~~~~~~y 330 (502)
++|.++|++||+++|+|++|+.+....... +..+..+++.+++.||+++++ ..|+++.++... +....... .+
T Consensus 143 ~~i~~la~~~~~~li~D~a~~~g~~~~~~~---~~~~~~i~~~S~s~~K~l~g~-~~G~~~~~~~~~~~~~~~~~~~-~~ 217 (388)
T 1b9h_A 143 DALAKISADTGVPLLQDAAHAHGARWQGKR---VGELDSIATFSFQNGKLMTAG-EGGAVVFPDGETEKYETAFLRH-SC 217 (388)
T ss_dssp HHHHHHHHHHTCCBCEECTTCTTCEETTEE---GGGSSSCEEEECCTTSSSCSS-SCEEEEECTTCHHHHHHHHHHT-BT
T ss_pred HHHHHHHHHcCCEEEEecchhcCCccCCee---cccccceEEEEccCCCcccCC-CeEEEEECCHHHHHHHHHHHHH-hC
Confidence 999999999999999999998654331111 111224677888889999765 467777765533 22221100 00
Q ss_pred ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-----C
Q 037144 331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-----R 405 (502)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-----~ 405 (502)
.... ....+.......+.+...+.++.... ..+.+.+.+++..++++++.+.|+++|++++..+ +
T Consensus 218 -~~~~-------~~~~~~~~~~g~~~~~~~~~~a~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 287 (388)
T 1b9h_A 218 -GRPR-------DDRRYFHKIAGSNMRLNEFSASVLRA--QLARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADR 287 (388)
T ss_dssp -TCCT-------TCSSCCCCSCCCBCBCBHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCB
T ss_pred -CCCc-------cCccceeecccccCCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCc
Confidence 0000 00000000111111223344443333 2455777888889999999999999989988752 2
Q ss_pred C-eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE---C------------
Q 037144 406 N-FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV---G------------ 469 (502)
Q Consensus 406 ~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~------------ 469 (502)
. .++++|++.+.. .....++.+.|.++|..+..+... .
T Consensus 288 ~~~~~~~~~~~~~~--------------------------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~ 341 (388)
T 1b9h_A 288 NSHYMAMFRIPGLT--------------------------EERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDES 341 (388)
T ss_dssp CCCSEEEEECTTCC--------------------------HHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSC
T ss_pred cceEEEEEEeCCcC--------------------------cccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCccc
Confidence 2 456777764310 011346777777788754332110 0
Q ss_pred --------------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 470 --------------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 470 --------------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
....||+++...+++++||+++++.|+++.++
T Consensus 342 ~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 342 VDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp HHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 02369999864432788999999999998764
No 74
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.92 E-value=2.4e-23 Score=211.59 Aligned_cols=326 Identities=13% Similarity=0.053 Sum_probs=216.9
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+......|....+..++++++.+++.+.+|.+... ...++|+||++|+..++.+...
T Consensus 46 ~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~v~~t~g~~~al~~~~~~l~~------- 113 (391)
T 3h14_A 46 PRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDP-----GRVVITPGSSGGFLLAFTALFD------- 113 (391)
T ss_dssp CHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHHCC-------
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCH-----HHEEEecChHHHHHHHHHHhcC-------
Confidence 3445666666665544556655567899999999999999964321 2689999999999887776543
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|+++..+|.++..+++..|+ +++.+|+++++++.+|+++|+++ + +.+|+++.++|++|.+
T Consensus 114 ----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~---~------~~~v~i~~p~nptG~~ 177 (391)
T 3h14_A 114 ----SGDRVGIGAPGYPSYRQILRALGL---VPVDLPTAPENRLQPVPADFAGL---D------LAGLMVASPANPTGTM 177 (391)
T ss_dssp ----TTCEEEEEESCCHHHHHHHHHTTC---EEEEEECCGGGTTSCCHHHHTTS---C------CSEEEEESSCTTTCCC
T ss_pred ----CCCEEEEcCCCCccHHHHHHHcCC---EEEEeecCcccCCCCCHHHHHhc---C------CeEEEECCCCCCCCcc
Confidence 567888889999999999999999 99999998655578999999876 2 3378888999999999
Q ss_pred CC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhc
Q 037144 250 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLS 325 (502)
Q Consensus 250 dp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~ 325 (502)
-| +++|+++|++||+++++|++|+.+..... .... ......+.++.+++|+++ .+.+.|+++.++. .. +.+.
T Consensus 178 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~-~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~-~~~~ 253 (391)
T 3h14_A 178 LDHAAMGALIEAAQAQGASFISDEIYHGIEYEAK-AVTA-LELTDECYVINSFSKYFSMTGWRVGWMVVPED-QV-RVVE 253 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC-CCCG-GGTCSSSEEEEESSSTTCCTTSCCEEEECCGG-GH-HHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECcchhcccCCC-CcCh-hhcCCCEEEEEechhccCCccceeEEEEeCHH-HH-HHHH
Confidence 87 88999999999999999999987554221 1111 112245567778999997 5566788876543 22 2221
Q ss_pred CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 037144 326 TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP 404 (502)
Q Consensus 326 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~ 404 (502)
....+... ....+..++++..+ +.+.+.+..++..++++++.+.|++. ++..+.+
T Consensus 254 ~~~~~~~~-----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~ 309 (391)
T 3h14_A 254 RIAQNMFI-----------------------CAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKA-GFTRIAP 309 (391)
T ss_dssp HHHHHTTC-----------------------CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCBCC
T ss_pred HHHhhhcc-----------------------CCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCCcccC
Confidence 10000000 00223333333322 56778889999999999999999987 4444334
Q ss_pred CCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC---CEEEEEEEec
Q 037144 405 RNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG---GIYVLRFAAG 479 (502)
Q Consensus 405 ~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~---g~~~lR~~~~ 479 (502)
+..+++. +.+..... ...++.+++.++ |..+.++..+. +..++|++++
T Consensus 310 ~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~ 362 (391)
T 3h14_A 310 PDGAFYVYADVSDLTD---------------------------DSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYA 362 (391)
T ss_dssp CCBTTEEEEECTTTCS---------------------------CHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECC
T ss_pred CCeeEEEEEecCccCC---------------------------CHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEec
Confidence 5444443 33432111 023566666665 76544433332 3579999986
Q ss_pred CCCCcHHHHHHHHHHHHHHHHh
Q 037144 480 NSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 480 ~~~t~~~di~~~~~~l~~~~~~ 501 (502)
. ++++|+++++.|.++.++
T Consensus 363 ~---~~~~i~~~l~~l~~~~~~ 381 (391)
T 3h14_A 363 R---ATADIEEGLDRLEAFMQA 381 (391)
T ss_dssp S---CHHHHHHHHHHHHHHHHH
T ss_pred C---CHHHHHHHHHHHHHHHHH
Confidence 4 568999999999998765
No 75
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.91 E-value=7.8e-24 Score=216.81 Aligned_cols=331 Identities=11% Similarity=0.057 Sum_probs=222.9
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCC-cEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNG-GGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
..+.+.+...++.....|...++..++++.+.+|+.+.+|.+... . .+++|+||++|+..++.+...
T Consensus 41 ~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~~v~~t~g~~~al~~~~~~~~~------- 108 (411)
T 2o0r_A 41 PKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDP-----ETEVLVTVGATEAIAAAVLGLVE------- 108 (411)
T ss_dssp HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCT-----TTSEEEEEHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCC-----CceEEEeCCHHHHHHHHHHHhcC-------
Confidence 445566655554333456555667899999999999999864221 2 589999999999888776632
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKS-SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~-~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|+++..+|.++..+++..|+ +++.+|++.+ .++.+|+++|+++++++ +.+|+++.++|++|.
T Consensus 109 ----~gd~Vl~~~~~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~~~nptG~ 175 (411)
T 2o0r_A 109 ----PGSEVLLIEPFYDSYSPVVAMAGA---HRVTVPLVPDGRGFALDADALRRAVTPR------TRALIINSPHNPTGA 175 (411)
T ss_dssp ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEEETTEEECCHHHHHHHCCTT------EEEEEEESSCTTTCC
T ss_pred ----CCCEEEEeCCCcHhHHHHHHHcCC---EEEEeeccccccCCCCCHHHHHHhhccC------ceEEEEeCCCCCCCC
Confidence 567888899999999999999999 9999998642 24679999999998642 447788889999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhh
Q 037144 249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLS 322 (502)
Q Consensus 249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~ 322 (502)
+-| +++|+++|++||+++++|++|+.+.+........ +.+....|.++.++||+++.| ..+|+++++ +... +
T Consensus 176 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~-~ 253 (411)
T 2o0r_A 176 VLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGP-AELI-A 253 (411)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECC-HHHH-H
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeC-HHHH-H
Confidence 965 5899999999999999999998765422111111 111236789999999998743 347888874 3332 2
Q ss_pred hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
.+.....+.. ++ ........+..+++. +.++++++.++..++++++.+.|++. ++++.
T Consensus 254 ~l~~~~~~~~-----------------~~---~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 311 (411)
T 2o0r_A 254 GVRAAKQYLS-----------------YV---GGAPFQPAVALALDT-EDAWVAALRNSLRARRDRLAAGLTEI-GFAVH 311 (411)
T ss_dssp HHHHHHHHHT-----------------SC---CCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEC
T ss_pred HHHHHHhhcc-----------------CC---CChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHc-CCEec
Confidence 2211111100 00 001122233344443 46778888999999999999999887 78876
Q ss_pred cCCCee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeE-C----------
Q 037144 403 FPRNFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIV-G---------- 469 (502)
Q Consensus 403 ~~~~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~-~---------- 469 (502)
. +..+ ++++.+..... . + ..++.+++. +.|..+.++..+ .
T Consensus 312 ~-~~~g~~~~~~~~~~~~----------------------~--~--~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~ 364 (411)
T 2o0r_A 312 D-SYGTYFLCADPRPLGY----------------------D--D--STEFCAALPEKVGVAAIPMSAFCDPAAGQASQQA 364 (411)
T ss_dssp C-CCBSSEEEEECGGGTC----------------------C--C--HHHHHHHHHHHHSEECEEGGGGSCCC--------
T ss_pred C-CCeeEEEEEecCCCCC----------------------C--C--HHHHHHHHHHhCCEEEcChhhhCCCccccccccc
Confidence 4 4444 55666542100 0 0 235566665 457655443322 1
Q ss_pred --CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 470 --GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 470 --g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
+..++|+++.+ ++++|+++++.|.++.+
T Consensus 365 ~~~~~~iRis~~~---~~e~i~~~~~~l~~~~~ 394 (411)
T 2o0r_A 365 DVWNHLVRFTFCK---RDDTLDEAIRRLSVLAE 394 (411)
T ss_dssp CCGGGCEEEECCS---CHHHHHHHHHHHGGGGC
T ss_pred cCCCCeEEEEecC---CHHHHHHHHHHHHHHHh
Confidence 34689999863 67799999999987654
No 76
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.91 E-value=1.5e-23 Score=211.86 Aligned_cols=307 Identities=10% Similarity=0.049 Sum_probs=206.3
Q ss_pred CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC
Q 037144 105 GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT 184 (502)
Q Consensus 105 ~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 184 (502)
...|...++..++++.+.+|+. +.+.+ ..++|+||++|+..++.+... +++.|+++..+
T Consensus 56 ~~~y~~~~g~~~l~~~la~~~~---~~~~~-------~v~~~~g~~~a~~~~~~~l~~-----------~gd~Vl~~~~~ 114 (375)
T 3op7_A 56 KLNYGWIEGSPAFKKSVSQLYT---GVKPE-------QILQTNGATGANLLVLYSLIE-----------PGDHVISLYPT 114 (375)
T ss_dssp CCSSCCTTCCHHHHHHHHTTSS---SCCGG-------GEEEESHHHHHHHHHHHHHCC-----------TTCEEEEEESS
T ss_pred CcCCCCCCChHHHHHHHHHHhc---cCChh-------hEEEcCChHHHHHHHHHHhcC-----------CCCEEEEeCCC
Confidence 3445555566777776554431 34443 689999999999888776543 67788899999
Q ss_pred chhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHH
Q 037144 185 HCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQ 261 (502)
Q Consensus 185 H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~ 261 (502)
|.++..+++..|. +++.+|+++++++.+|+++|++++++++ .+|+++.++|++|.+-| +++|+++|++
T Consensus 115 ~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~~~nptG~~~~~~~l~~i~~la~~ 185 (375)
T 3op7_A 115 YQQLYDIPKSLGA---EVDLWQIEEENGWLPDLEKLRQLIRPTT------KMICINNANNPTGAVMDRTYLEELVEIASE 185 (375)
T ss_dssp CTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHHHCCTTC------CEEEEESSCTTTCCCCCHHHHHHHHHHHHT
T ss_pred chhHHHHHHHcCC---EEEEEeccccCCCCCCHHHHHHhhccCC------eEEEEcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 9999999999999 9999999754457799999999986433 37788899999999999 9999999999
Q ss_pred hCCEEEeeccccccccc-CccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCC
Q 037144 262 FGIWVHVDAAYAGSACI-CPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE 339 (502)
Q Consensus 262 ~g~~lhVDaA~g~~~~~-~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 339 (502)
||+++++|++|+.+... .+.... ....+.+..+++|+++.| ..+|+++. ++... +.+.....+...
T Consensus 186 ~~~~li~De~~~~~~~~~~~~~~~----~~~~~i~~~s~sK~~~~~G~r~G~v~~-~~~l~-~~~~~~~~~~~~------ 253 (375)
T 3op7_A 186 VGAYILSDEVYRSFSELDVPSIIE----VYDKGIAVNSLSKTYSLPGIRIGWVAA-NHQVT-DILRDYRDYTMI------ 253 (375)
T ss_dssp TTCEEEEECCSCCCSSSCCCCHHH----HCTTEEEEEESSSSSSCGGGCCEEEEC-CHHHH-HHHTTTGGGTTS------
T ss_pred cCCEEEEEcccccccccCCCchhh----hcCCEEEEeEChhhcCCcccceEEEEe-CHHHH-HHHHHHHhhhcc------
Confidence 99999999999875442 111111 124457788899999744 55688776 44433 233221111100
Q ss_pred CcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecC
Q 037144 340 PKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPS 417 (502)
Q Consensus 340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~ 417 (502)
+ ...+..+++...+ ..+.+++..++..++++++.+.|++.|++++..+.....+.+.+...
T Consensus 254 --------------~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 316 (375)
T 3op7_A 254 --------------C---AGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVD 316 (375)
T ss_dssp --------------C---CCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCS
T ss_pred --------------C---CCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCC
Confidence 0 0222223332222 23456677777789999999999998899877443333333333321
Q ss_pred cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHH-HhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144 418 AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESI-NVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQ 496 (502)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~ 496 (502)
. + ..++.+++ .+.|..+.++..+....++|++++. ++++|+++++.|.
T Consensus 317 -~--------------------~-------~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~---~~~~i~~~l~~l~ 365 (375)
T 3op7_A 317 -M--------------------P-------MEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFAC---EQETLIKGLEKLS 365 (375)
T ss_dssp -S--------------------C-------HHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCS---CHHHHHHHHHHHH
T ss_pred -C--------------------C-------HHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecC---CHHHHHHHHHHHH
Confidence 1 0 23455555 3568765544444446789999763 3479999999999
Q ss_pred HHHHh
Q 037144 497 EHLEA 501 (502)
Q Consensus 497 ~~~~~ 501 (502)
++.++
T Consensus 366 ~~l~~ 370 (375)
T 3op7_A 366 QFLRR 370 (375)
T ss_dssp HHHGG
T ss_pred HHHHH
Confidence 88764
No 77
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.91 E-value=1.1e-23 Score=216.87 Aligned_cols=345 Identities=10% Similarity=0.049 Sum_probs=224.5
Q ss_pred HHHHHHHHHhhcCC---CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCC-cEEEcCCchHHHHHHHHHHHHHHH
Q 037144 90 AGIVGEMLSSGFNV---VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNG-GGVIQGTTCEALLCTLTAARDRVL 165 (502)
Q Consensus 90 ~~~~~~~l~~~~n~---~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~a~~~~~ 165 (502)
+..+.+.+...++. ....|....+..++++++.+|+.+.+|.+... . ..++|+||++|+..++.+...
T Consensus 52 ~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~-----~~~v~~~~g~~~a~~~~~~~~~~--- 123 (429)
T 1yiz_A 52 PKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINP-----MTEVLVTVGAYEALYATIQGHVD--- 123 (429)
T ss_dssp CHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCT-----TTSEEEESHHHHHHHHHHHHHCC---
T ss_pred CHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCC-----cCCEEEecChHHHHHHHHHHhcC---
Confidence 34556666666644 23345544567889999999999998864221 2 589999999999888777642
Q ss_pred HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCC--------CcccCHHHHHHHHHHHHhcCCccEEE
Q 037144 166 KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSS--------SYGLSAESVLSQINLDVEAELIPLFL 237 (502)
Q Consensus 166 ~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~--------~~~~d~~~Le~~i~~~~~~g~~p~~V 237 (502)
+++.|+++..+|.++..+++..|. +++.+|++.++ ++.+|+++|+++++++ +.+|
T Consensus 124 --------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v 186 (429)
T 1yiz_A 124 --------EGDEVIIIEPFFDCYEPMVKAAGG---IPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK------TKMI 186 (429)
T ss_dssp --------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTT------EEEE
T ss_pred --------CCCEEEEcCCCchhHHHHHHHcCC---EEEEEeCCcccccccccccCcccCHHHHHHHhccC------ceEE
Confidence 567788888899999999999999 99999987532 4689999999988532 4477
Q ss_pred EEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCCC-CcceE
Q 037144 238 CATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFTT-LDCCC 311 (502)
Q Consensus 238 v~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~p-~~~g~ 311 (502)
+++.++|++|.+-| +++|+++|++||+++++|++|+++.+........ +.+..+.|.++.++||+++.| ..+|+
T Consensus 187 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~ 266 (429)
T 1yiz_A 187 IINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGW 266 (429)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEE
T ss_pred EECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEE
Confidence 77899999999975 9999999999999999999998765422111111 111235788999999998733 34888
Q ss_pred EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh----c--HHHHHHHHHHHHHH
Q 037144 312 LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF----G--VANLRNFIRSHVGM 385 (502)
Q Consensus 312 ~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~----g--~~g~~~~~~~~~~l 385 (502)
+++++ ... +.+.....+.. ++ ........+..+++.. + .+.+++..++..++
T Consensus 267 ~~~~~-~~~-~~l~~~~~~~~-----------------~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 324 (429)
T 1yiz_A 267 AYGPE-ALL-KNLQMVHQNCV-----------------YT---CATPIQEAIAVGFETELKRLKSPECYFNSISGELMAK 324 (429)
T ss_dssp EESCH-HHH-HHHHHHHHTTT-----------------CC---CCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHH
T ss_pred EEeCH-HHH-HHHHHHHhhcc-----------------cC---CChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHH
Confidence 88753 322 22211100000 00 0001112333444431 3 45678888889999
Q ss_pred HHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEE
Q 037144 386 AKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMT 464 (502)
Q Consensus 386 a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~ 464 (502)
++++.+.|++. ++++..+....++++.+...... .... .... .....++.+++. +.|..+.+
T Consensus 325 ~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~------------~~~~--~~~~--~~~~~~l~~~l~~~~gv~v~~ 387 (429)
T 1yiz_A 325 RDYMASFLAEV-GMNPTVPQGGYFMVADWSSLDSK------------VDLT--QETD--ARKDYRFTKWMTKSVGLQGIP 387 (429)
T ss_dssp HHHHHHHHHHH-TCEEEECSBSSEEEEECCSSCTT------------TTCC--SSSS--SCHHHHHHHHHHHHTSEECBC
T ss_pred HHHHHHHHHhC-CCcccCCCcceEEEEEccccccc------------cccc--cccc--CCCHHHHHHHHHHhCCEEEeC
Confidence 99999999887 78876443344666666431000 0000 0000 001235666665 46764433
Q ss_pred eeeEC-------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 465 HAIVG-------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 465 ~~~~~-------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+..+. +..++|++++ +++++|+++++.|.++.++
T Consensus 388 g~~f~~~~~~~~~~~~iRis~~---~~~e~i~~~l~~l~~~l~~ 428 (429)
T 1yiz_A 388 PSAFYSEPNKHLGEDFVRYCFF---KKDENLQKAAEILRKWKGS 428 (429)
T ss_dssp GGGGSCGGGGGGTTTEEEEECC---SCHHHHHHHHHHHHHHSCC
T ss_pred chHhCCCcccCCCCCeEEEEec---CCHHHHHHHHHHHHHhccC
Confidence 32232 2568999986 3678999999999987654
No 78
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.91 E-value=2.8e-22 Score=202.26 Aligned_cols=300 Identities=13% Similarity=0.062 Sum_probs=209.7
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCch
Q 037144 107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHC 186 (502)
Q Consensus 107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~ 186 (502)
.|..... .++++.+.+|+.+.+|++... ...++|+|+++++..++.+... +++.|+++..+|.
T Consensus 65 ~y~~~~~-~~l~~~la~~l~~~~g~~~~~-----~~v~~~~G~~~al~~~~~~l~~-----------~gd~Vl~~~~~y~ 127 (369)
T 3cq5_A 65 RYPERDA-VELRDELAAYITKQTGVAVTR-----DNLWAANGSNEILQQLLQAFGG-----------PGRTALGFQPSYS 127 (369)
T ss_dssp SCCCTTC-HHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCS-----------TTCEEEEEESSCT
T ss_pred cCCCccH-HHHHHHHHHhhhhcccCCCCh-----HhEEECCChHHHHHHHHHHhcC-----------CCCEEEEcCCChH
Confidence 4433333 689999999999987764221 2689999999998777765532 5678888889999
Q ss_pred hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV 266 (502)
Q Consensus 187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l 266 (502)
++..+++..|. +++.+|.+. ++.+|+++|++++++. .+.+|+++.++|++|.+.|++++.++|+.+++++
T Consensus 128 ~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~l 197 (369)
T 3cq5_A 128 MHPILAKGTHT---EFIAVSRGA--DFRIDMDVALEEIRAK-----QPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIV 197 (369)
T ss_dssp HHHHHHHHTTC---EEEEEECCT--TSSCCHHHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEE
T ss_pred HHHHHHHHcCC---EEEEecCCc--CCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEE
Confidence 99999999999 999999764 4689999999999762 1236777899999999999999999999999999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144 267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV 345 (502)
Q Consensus 267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (502)
++|++|+.+... .............+.++.++||+++.| ..+|++++++. .. +.+......
T Consensus 198 i~De~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~-~~l~~~~~~--------------- 259 (369)
T 3cq5_A 198 IVDEAYAEFSPS-PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPA-FI-DAVMLVRLP--------------- 259 (369)
T ss_dssp EEECTTGGGCCS-CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTH-HH-HHHHTTSCT---------------
T ss_pred EEECCchhhcCC-cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHH-HH-HHHHHcCCC---------------
Confidence 999999876532 111121121111457888999999744 45788887643 22 222111100
Q ss_pred CCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhh
Q 037144 346 GYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLR 424 (502)
Q Consensus 346 ~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~ 424 (502)
++ ...+..+++...+ ..+.+++..++..++++++.+.|++. ++++. ++..+++++.+. ..
T Consensus 260 ----~~------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~-~~------ 320 (369)
T 3cq5_A 260 ----YH------LSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEEL-GYAVV-PSESNFVFFGDF-SD------ 320 (369)
T ss_dssp ----TC------SCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHH-TCEEE-CCSSSEEEEECC-SS------
T ss_pred ----CC------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEC-CCCCeEEEEECC-CC------
Confidence 00 1233344444433 23457788888999999999999885 78886 556667777553 11
Q ss_pred hcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 425 TKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
..++.+++.+.|..+ .+. ....++|++++ +++++++++++|+++.+
T Consensus 321 -----------------------~~~l~~~l~~~gi~v-~~~--~~~~~iRis~~----~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 321 -----------------------QHAAWQAFLDRGVLI-RDV--GIAGHLRTTIG----VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp -----------------------HHHHHHHHHHTTEEC-BCC--SCTTEEEEECC----CHHHHHHHHHHHHHHHT
T ss_pred -----------------------HHHHHHHHHHCCEEE-EEC--CCCCeEEEEeC----CHHHHHHHHHHHHHHHh
Confidence 235666676678643 332 22468999986 56799999999998764
No 79
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.91 E-value=1.4e-23 Score=211.70 Aligned_cols=332 Identities=11% Similarity=0.044 Sum_probs=208.3
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (502)
..+.+.+...+.... +..++... ++.+.+++++|.+ .+++|+|||+|+..++.+++.. .
T Consensus 13 ~~v~~a~~~~~~~~~--~~~~~~~~----~l~~~la~~~~~~---------~v~~~~ggt~al~~~~~~~~~~-~----- 71 (375)
T 2fnu_A 13 KEDKKAVLEVLNSKQ--LTQGKRSL----LFEEALCEFLGVK---------HALVFNSATSALLTLYRNFSEF-S----- 71 (375)
T ss_dssp HHHHHHHHHHHTSSC--CSSSHHHH----HHHHHHHHHHTCS---------EEEEESCHHHHHHHHHHHSSCC-C-----
T ss_pred HHHHHHHHHHHHcCc--ccCChHHH----HHHHHHHHHhCCC---------eEEEeCCHHHHHHHHHHHhccc-C-----
Confidence 334555555554321 22234333 4556677777875 3799999999998888776210 0
Q ss_pred cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
.+++.|+++..+|.++..+++..|+ +++.+|++++ +.+|+++|+++++++ +.+|+++.+ +|.+.
T Consensus 72 --~~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~--~~~d~~~l~~~i~~~------~~~v~~~~~---tG~~~ 135 (375)
T 2fnu_A 72 --ADRNEIITTPISFVATANMLLESGY---TPVFAGIKND--GNIDELALEKLINER------TKAIVSVDY---AGKSV 135 (375)
T ss_dssp --TTSCEEEECSSSCTHHHHHHHHTTC---EEEECCBCTT--SSBCGGGSGGGCCTT------EEEEEEECG---GGCCC
T ss_pred --CCCCEEEECCCccHhHHHHHHHCCC---EEEEeccCCC--CCCCHHHHHhhcCcC------ceEEEEeCC---cCCcc
Confidence 1567899999999999999999999 9999999763 489999999988643 235666554 89999
Q ss_pred ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeC-chhhhhhhcCCcc
Q 037144 251 PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKD-PSCLLSTLSTNPQ 329 (502)
Q Consensus 251 pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~-~~~l~~~~~~~~~ 329 (502)
|+++|.++|++||+++|+|++|+.+...... .+.....+++.++++||+++ | |.|++++++ +.... .+..
T Consensus 136 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~i~~~s~s~~K~~~-~-g~g~~~~~~~~~~~~-~~~~--- 206 (375)
T 2fnu_A 136 EVESVQKLCKKHSLSFLSDSSHALGSEYQNK---KVGGFALASVFSFHAIKPIT-T-AEGGAVVTNDSELHE-KMKL--- 206 (375)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSC-C-SSCEEEEESCHHHHH-HHHH---
T ss_pred CHHHHHHHHHHcCCEEEEECccccCCeECCe---eccccCCeEEEeCCCCCCcc-c-cCceEEEeCCHHHHH-HHHH---
Confidence 9999999999999999999999776543211 11212235566777889984 4 688888854 43322 1110
Q ss_pred cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC----
Q 037144 330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR---- 405 (502)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~---- 405 (502)
+....... . ....+. ....+.++....+.+++.....++++++.++..++++++.+.|+++|++++..++
T Consensus 207 ~~~~~~~~---~-~~~~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 280 (375)
T 2fnu_A 207 FRSHGMLK---K-DFFEGE--VKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDK 280 (375)
T ss_dssp HTBTTEEE---S-SSSCEE--ESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSC
T ss_pred HHhcCCcc---c-cccccc--cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCC
Confidence 10000000 0 000000 0001111122233333333345678889999999999999999999899887541
Q ss_pred -CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEe---ee----EC--------
Q 037144 406 -NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTH---AI----VG-------- 469 (502)
Q Consensus 406 -~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~---~~----~~-------- 469 (502)
...++.+.+...+. . ...++.+.|.++|..+... .. +.
T Consensus 281 ~~~~~~~~~~~~~~~----------------------~----~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~ 334 (375)
T 2fnu_A 281 SSNHLYPILMHQKFF----------------------T----CKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPL 334 (375)
T ss_dssp CCCSCEEEEECGGGG----------------------G----GHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCC
T ss_pred cceEEEEEEeCcccc----------------------c----hHHHHHHHHHHCCCCccccccccccchhhhcCCCccCC
Confidence 12233455432100 0 1345677777777643211 00 00
Q ss_pred ------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 470 ------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 470 ------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
...++|+++. +.++++|+++++++|+++.++
T Consensus 335 ~~~~~~~~~~lRi~~~-~~~t~~~i~~~~~~l~~~~~~ 371 (375)
T 2fnu_A 335 KSAEDFYHAEISLPCH-ANLNLESVQNIAHSVLKTFES 371 (375)
T ss_dssp HHHHHHHHHEEEECCC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHhCEEEecCC-CCCCHHHHHHHHHHHHHHHHH
Confidence 1268999975 556788999999999988754
No 80
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.91 E-value=2.9e-24 Score=224.59 Aligned_cols=344 Identities=11% Similarity=0.033 Sum_probs=211.0
Q ss_pred HHHHHHHHHHhhcCC-CC------cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHH
Q 037144 89 VAGIVGEMLSSGFNV-VG------LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAAR 161 (502)
Q Consensus 89 ~~~~~~~~l~~~~n~-~~------~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~ 161 (502)
++..+.+.+...+.+ .. ..|..++...++|+.+++++++++|++.+. ....++.++|+.+|+.++.+..
T Consensus 56 ~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~----~~~~V~~~sGs~an~~~~~all 131 (483)
T 1rv3_A 56 ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQC----WGVNVQPYSGSPANFAVYTALV 131 (483)
T ss_dssp CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTT----EEEECCCSSHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCccc----CceEEEECCcHHHHHHHHHHhc
Confidence 344555565555432 21 124455677899999999999999997420 0012444555688876666543
Q ss_pred HHHHHHhCccCCCCeEEEeCCCCchhHHH--------HHHHcCCCCCCEEEEec--CCCCCcccCHHHHHHHHHHHHhcC
Q 037144 162 DRVLKKIGRENISKLVVYSSDQTHCAFQK--------AAQIVGIDRKNIRAIKT--TKSSSYGLSAESVLSQINLDVEAE 231 (502)
Q Consensus 162 ~~~~~~~~~~~~~~~~v~~s~~~H~s~~~--------aa~~~Glg~~~v~~v~~--~~~~~~~~d~~~Le~~i~~~~~~g 231 (502)
+ +++.|++++..|.++.. .++..|. .++.++. ++ +++.+|+++|++++++..
T Consensus 132 ~-----------pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~---~~~~v~~~~~~-~~~~iD~d~le~~i~~~~--- 193 (483)
T 1rv3_A 132 E-----------PHGRIMGLDLPDGGHLTHGFMTDKKKISATSI---FFESMAYKVNP-DTGYIDYDRLEENARLFH--- 193 (483)
T ss_dssp C-----------TTCEEEEECGGGTCCGGGCCBCSSCBCSHHHH---HSEEEEECBCT-TTCSBCHHHHHHHHHHHC---
T ss_pred C-----------CCCEEEEecCccCcCcchhhhhcccCcccccc---eEEEEECcccc-CCCcCCHHHHHHHHhhcC---
Confidence 2 67889998888876542 2344453 2455554 53 358999999999997321
Q ss_pred CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceE
Q 037144 232 LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCC 311 (502)
Q Consensus 232 ~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~ 311 (502)
|.+|++ .+++++ .+.|+++|+++|+++|+++|+|+||+.+....+.....+ ..+|++++++||++.+|.+ |+
T Consensus 194 --tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~---~~~div~~s~~K~l~Gprg-G~ 265 (483)
T 1rv3_A 194 --PKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPF---EHCHVVTTTTHKTLRGCRA-GM 265 (483)
T ss_dssp --CSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGG---GTCSEEEEESSGGGCCCSC-EE
T ss_pred --CcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCC---CCCcEEEecCcccCCCCCc-eE
Confidence 336777 666666 889999999999999999999999976654432222212 2689999999999988887 99
Q ss_pred EEeeCchhhhhhh-cCCcccccCccCCCCCcccccCCCc-ccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 037144 312 LWVKDPSCLLSTL-STNPQYLKNEATDQEPKEQEVGYKD-WQITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKL 388 (502)
Q Consensus 312 ~~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~-~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~ 388 (502)
+++++........ .....|-.. ..++... ...+++... ...++..+++.....+++++.++..+++++
T Consensus 266 i~~~~~~~~~~~~~g~~~~y~~~---------~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~ 336 (483)
T 1rv3_A 266 IFYRRGVRSVDPKTGKEILYNLE---------SLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRA 336 (483)
T ss_dssp EEEECSBCC-------CCBCCHH---------HHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHH
T ss_pred EEEcchhhhhccccCcchhhHHH---------HHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHH
Confidence 9988652100000 000000000 0000000 000111111 123445566666667889999999999999
Q ss_pred HHHHHhcCCCeEEecCCC-eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE---
Q 037144 389 FERLVTSDKRFEVAFPRN-FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT--- 464 (502)
Q Consensus 389 l~~~l~~~~~~~l~~~~~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~--- 464 (502)
+.+.|.+. |++++.+.. ...+.+.+.+.+. + ...+.+.|.+.|+.+..
T Consensus 337 l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~g~-------------------------~--~~~~~~~L~~~gI~v~~~~~ 388 (483)
T 1rv3_A 337 LSAALVEL-GYKIVTGGSDNHLILVDLRSKGT-------------------------D--GGRAEKVLEACSIACNKNTC 388 (483)
T ss_dssp HHHHHHHT-TCEEGGGSCSSSEEEEEGGGGTC-------------------------C--HHHHHHHHHHTTEECEEECC
T ss_pred HHHHHHhc-CCEeccCCCCCceEEEeccCCCC-------------------------C--HHHHHHHHHhCCcEEecCCC
Confidence 99999998 899875432 2234444432211 0 12345555556754331
Q ss_pred eee--ECCEEEEEEEecCCCCc----HHHHHHHHHHHHHHHH
Q 037144 465 HAI--VGGIYVLRFAAGNSMTM----ESHVRAAWTVVQEHLE 500 (502)
Q Consensus 465 ~~~--~~g~~~lR~~~~~~~t~----~~di~~~~~~l~~~~~ 500 (502)
+.. ..+..++|+++.. .++ ++|++++++.|.++.+
T Consensus 389 pg~~~~~~~~~iRis~~~-~~t~g~~~edi~~~~~~l~~~l~ 429 (483)
T 1rv3_A 389 PGDKSALRPSGLRLGTPA-LTSRGLLEKDFQKVAHFIHRGIE 429 (483)
T ss_dssp SSCSCTTSCCEEEEECHH-HHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCcCCCCceEEeecCC-cccCCCCHHHHHHHHHHHHHHHH
Confidence 221 1135689999863 345 7899999999988754
No 81
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.91 E-value=1.9e-22 Score=202.86 Aligned_cols=310 Identities=12% Similarity=0.068 Sum_probs=211.8
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+.. ...| ..+.. .++++++++++|.+.+ ..++|+|||+++..++.+...
T Consensus 47 ~~~v~~a~~~~~~~-~~~y-~~~~~----~~lr~~la~~~~~~~~-------~v~~~~g~t~a~~~~~~~~~~------- 106 (363)
T 3ffh_A 47 SKKVAAIQANSSVE-TEIY-PDGWA----SSLRKEVADFYQLEEE-------ELIFTAGVDELIELLTRVLLD------- 106 (363)
T ss_dssp CHHHHHHHHTCBSC-CCBC-----C----HHHHHHHHHHHTCCGG-------GEEEESSHHHHHHHHHHHHCS-------
T ss_pred CHHHHHHHHHHHHH-hhcC-CCcch----HHHHHHHHHHhCCChh-------hEEEeCCHHHHHHHHHHHHcc-------
Confidence 44455666655532 2223 22333 3455667788887654 689999999999887776532
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|+++..+|.++...++..|. +++.+|.++ ++.+|+++|+++++++ +.+|+++.++|++|.+
T Consensus 107 ----~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~ 171 (363)
T 3ffh_A 107 ----TTTNTVMATPTFVQYRQNALIEGA---EVREIPLLQ--DGEHDLEGMLNAIDEK------TTIVWICNPNNPTGNY 171 (363)
T ss_dssp ----TTCEEEEEESSCHHHHHHHHHHTC---EEEEEECCT--TSCCCHHHHHHHCCTT------EEEEEEESSCTTTCCC
T ss_pred ----CCCEEEEcCCChHHHHHHHHHcCC---EEEEecCCC--CCCcCHHHHHHhcccC------CCEEEEeCCCCCcCCC
Confidence 567888888999999999999999 999999985 4699999999998653 3478889999999999
Q ss_pred CChhHHHHHHHHh--CCEEEeecccccccccCccchhhhc--CCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhh
Q 037144 250 DPLKPLCDVAKQF--GIWVHVDAAYAGSACICPEFRHFID--GVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTL 324 (502)
Q Consensus 250 dpl~eI~~i~~~~--g~~lhVDaA~g~~~~~~~~~~~~~~--~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~ 324 (502)
-|+++|.++|+.+ |+++|+|++|+.+.. . ....... ....-+.+..+++|+++ ....+|++++ ++.......
T Consensus 172 ~~~~~l~~l~~~~~~~~~li~De~~~~~~~-~-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~ 248 (363)
T 3ffh_A 172 IELADIQAFLDRVPSDVLVVLDEAYIEYVT-P-QPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIA-DKEIIRQLN 248 (363)
T ss_dssp CCHHHHHHHHTTSCTTSEEEEECTTGGGCS-S-CCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEE-CHHHHHHHH
T ss_pred cCHHHHHHHHHhCCCCcEEEEeCchHhhcC-c-cccCHHHHhhcCCCEEEEeechhhhcCchhceeeeec-CHHHHHHHH
Confidence 9999999999988 999999999986554 1 1111111 11123366778999997 4445688877 443332211
Q ss_pred cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144 325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF 403 (502)
Q Consensus 325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~ 403 (502)
.....| ....+..+++...+ ..+++++..++..++++++.+.|++++++++.
T Consensus 249 ~~~~~~--------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~- 301 (363)
T 3ffh_A 249 IVRPPF--------------------------NTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLY- 301 (363)
T ss_dssp HTCCSC--------------------------CCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEC-
T ss_pred HhCCCC--------------------------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCceEC-
Confidence 111000 01233333333333 23677888899999999999999997799886
Q ss_pred CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCC
Q 037144 404 PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMT 483 (502)
Q Consensus 404 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t 483 (502)
++..+++++.+... ..++.+.|.++|..+.++..+....++|++++
T Consensus 302 ~~~~~~~~~~~~~~------------------------------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---- 347 (363)
T 3ffh_A 302 PANGNFVLIDLGIE------------------------------AGTIFSYLEKNGYITRSGAALGFPTAVRITIG---- 347 (363)
T ss_dssp CCCSSEEEEECSSC------------------------------HHHHHHHHHHTTEECEETTTTTCTTEEEEECC----
T ss_pred CCCCeEEEEECCCC------------------------------HHHHHHHHHHCCeEEEeCccCCCCCeEEEECC----
Confidence 55566666665421 24567777777865444333333569999975
Q ss_pred cHHHHHHHHHHHHHH
Q 037144 484 MESHVRAAWTVVQEH 498 (502)
Q Consensus 484 ~~~di~~~~~~l~~~ 498 (502)
+++|+++++++|+++
T Consensus 348 ~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 348 KEEDNSAVIALLEKL 362 (363)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 677999999999875
No 82
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.91 E-value=1.5e-22 Score=207.22 Aligned_cols=294 Identities=10% Similarity=0.073 Sum_probs=199.2
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+...++.+++++++|.+. .+++++|+++|..++.+... +++.|+++...|.++..+++..
T Consensus 104 ~~~~~l~~~la~~~g~~~---------~i~~~sGt~a~~~~l~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~ 163 (409)
T 3kki_A 104 YDKPMIEKRLAKFTGFDE---------CLLSQSGWNANVGLLQTICQ-----------PNTNVYIDFFAHMSLWEGARYA 163 (409)
T ss_dssp TTSCHHHHHHHHHHTCSE---------EEEESCHHHHHHHHHHHHCC-----------TTCEEEEETTSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCe---------EEEecchHHHHHHHHHHhcC-----------CCCEEEECCCcCHHHHHHHHHc
Confidence 344456677888888763 46667778999887776543 6788999999999999999999
Q ss_pred CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccc
Q 037144 196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS 275 (502)
Q Consensus 196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~ 275 (502)
|. +++.++. +|+++|+++|++.. +.+|+++.+++++|.+.|+++|.++|++||+|+++|++|+++
T Consensus 164 g~---~~~~~~~-------~d~~~le~~l~~~~-----~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g 228 (409)
T 3kki_A 164 NA---QAHPFMH-------NNCDHLRMLIQRHG-----PGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLG 228 (409)
T ss_dssp TC---EEEEECT-------TCHHHHHHHHHHHC-----SCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred CC---eEEEecC-------CCHHHHHHHHHhcC-----CeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCcccc
Confidence 98 8777653 58999999998642 248888999999999999999999999999999999999775
Q ss_pred cccCc--cchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144 276 ACICP--EFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT 353 (502)
Q Consensus 276 ~~~~~--~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 353 (502)
.+... ...........+|.++.++||+++.+ .|+++.++ ............+....
T Consensus 229 ~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~--gg~v~~~~-~~~~~~~~~~~~~~~~~------------------- 286 (409)
T 3kki_A 229 THGPNGAGLLAELGLTREVHFMTASLAKTFAYR--AGAIWCNN-EVNRCVPFISYPAIFSS------------------- 286 (409)
T ss_dssp TSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS--CEEEEESS-SGGGTHHHHCHHHHHSB-------------------
T ss_pred ccCCCCCcchhhcCCCCCCCEEEeecchhhCCC--ceEEEECH-HHHHHHHHhCcCccccC-------------------
Confidence 43211 01111111136889999999999866 36655543 32221111111121110
Q ss_pred CCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144 354 LCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTY 432 (502)
Q Consensus 354 ~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 432 (502)
+.. ....++.++++.+ +...++.++..++++++.+.|+++ ++++. +..+++.+.+...
T Consensus 287 -~~~~~~~aa~~aal~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~--------------- 345 (409)
T 3kki_A 287 -TLLPYEAAGLETTLEII--ESADNRRQHLDRMARKLRIGLSQL-GLTIR--SESQIIGLETGDE--------------- 345 (409)
T ss_dssp -CCCHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHTT-TCCCC--CSSSEEEEEEESH---------------
T ss_pred -CCcHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCccC--CCCCEEEEEeCCH---------------
Confidence 000 0112333344433 122577788899999999999988 67765 3456677766431
Q ss_pred ccccccchhHhhHHHHHHHHHHHHhcCcEEEEee---eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHA---IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
....++.++|.++|.++.... ...+..++|++++ ..+++++|++++++|+++.+.
T Consensus 346 -------------~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~-~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 346 -------------RNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLN-SDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp -------------HHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred -------------HHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEcc-CCCCHHHHHHHHHHHHHHHhc
Confidence 123467778888886532221 1235689999986 456778999999999998764
No 83
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.91 E-value=2e-22 Score=201.84 Aligned_cols=314 Identities=9% Similarity=0.028 Sum_probs=214.7
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+.. ...|. .+ ...++++++++++|.+.+ ..++|+||++++..++.+...
T Consensus 31 ~~~v~~a~~~~~~~-~~~y~-~~----~~~~l~~~la~~~~~~~~-------~i~~~~g~~~a~~~~~~~l~~------- 90 (354)
T 3ly1_A 31 SPKAQAAARDAVVK-ANRYA-KN----EILMLGNKLAAHHQVEAP-------SILLTAGSSEGIRAAIEAYAS------- 90 (354)
T ss_dssp CHHHHHHHHHTGGG-TTSCC-HH----HHHHHHHHHHHHTTSCGG-------GEEEESHHHHHHHHHHHHHCC-------
T ss_pred CHHHHHHHHHHHhh-CcCCC-CC----chHHHHHHHHHHhCCChH-------HEEEeCChHHHHHHHHHHHhC-------
Confidence 34455555555542 22331 12 234667788888998654 589999999999887776532
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|+++..+|.++...++..|+ +++.+|.++ ++.+|+++|+++|++. ..+.+|+++.++|++|.+
T Consensus 91 ----~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~l~~~----~~~~~v~l~~p~nptG~~ 157 (354)
T 3ly1_A 91 ----LEAQLVIPELTYGDGEHFAKIAGM---KVTKVKMLD--NWAFDIEGLKAAVAAY----SGPSIVYLVNPNNPTGTI 157 (354)
T ss_dssp ----TTCEEEEESSSCTHHHHHHHHTTC---EEEEECCCT--TSCCCHHHHHHHHHTC----SSCEEEEEESSCTTTCCC
T ss_pred ----CCCeEEECCCCchHHHHHHHHcCC---EEEEecCCC--CCCCCHHHHHHHhccC----CCCCEEEEeCCCCCcCCC
Confidence 567888899999999999999999 999999975 4799999999999731 124478888999999999
Q ss_pred CChhHHHHHHHH--hCCEEEeecccccccccCc--cchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhh
Q 037144 250 DPLKPLCDVAKQ--FGIWVHVDAAYAGSACICP--EFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTL 324 (502)
Q Consensus 250 dpl~eI~~i~~~--~g~~lhVDaA~g~~~~~~~--~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~ 324 (502)
-|+++|.++++. +|+++++|++|+.+..... ............+.++.++||+++ .+.+.|+++. ++.... .+
T Consensus 158 ~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~-~~ 235 (354)
T 3ly1_A 158 TPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVA-HPTVIA-LM 235 (354)
T ss_dssp CCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEEC-CHHHHH-HH
T ss_pred cCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeec-CHHHHH-HH
Confidence 999999888887 9999999999986554221 111111211134577889999997 4556788776 333322 22
Q ss_pred cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144 325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF 403 (502)
Q Consensus 325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~ 403 (502)
.....+ . ....+..+++...+ ..+.+.++.++..++++++.+.|++. ++++.
T Consensus 236 ~~~~~~-~------------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~- 288 (354)
T 3ly1_A 236 GRYVAG-E------------------------KINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL-KLPYL- 288 (354)
T ss_dssp GGGTTC-S------------------------CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-
T ss_pred HHhcCC-C------------------------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-
Confidence 111000 0 01233344444443 23667888899999999999999887 77765
Q ss_pred CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE-CCEEEEEEEecCCC
Q 037144 404 PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV-GGIYVLRFAAGNSM 482 (502)
Q Consensus 404 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lR~~~~~~~ 482 (502)
++..+++++.+... ..++.+.|.++|.. +. +.+ .+..++|++++
T Consensus 289 ~~~~~~~~~~~~~~------------------------------~~~~~~~l~~~gi~-v~-g~~~~~~~~iRis~~--- 333 (354)
T 3ly1_A 289 PSEGNFVFHQLVVP------------------------------LKDYQTHMADAGVL-IG-RAFPPADNWCRISLG--- 333 (354)
T ss_dssp CCCSSEEEEECSSC------------------------------HHHHHHHHHHTTEE-CC-CCCTTCTTEEEEECC---
T ss_pred CCCceEEEEECCCC------------------------------HHHHHHHHHHCCEE-Ee-ecCCCCCCEEEEEcC---
Confidence 45556666655421 24566777777864 33 333 34678999975
Q ss_pred CcHHHHHHHHHHHHHHHHh
Q 037144 483 TMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 483 t~~~di~~~~~~l~~~~~~ 501 (502)
+++++++++++|+++.++
T Consensus 334 -~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 334 -TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp -CHHHHHHHHHHHHHHHHT
T ss_pred -CHHHHHHHHHHHHHHHHh
Confidence 567999999999998764
No 84
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.91 E-value=2.9e-23 Score=210.74 Aligned_cols=326 Identities=13% Similarity=0.075 Sum_probs=216.5
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (502)
..+.+.+...+......|....+..++++.+.+|+...+|.+... ...++|+||++++..++.+..+
T Consensus 47 ~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~g~~~al~~~~~~l~~-------- 113 (385)
T 1b5p_A 47 EHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTP-----EETIVTVGGSQALFNLFQAILD-------- 113 (385)
T ss_dssp HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCG-----GGEEEESHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----HHEEEcCChHHHHHHHHHHhcC--------
Confidence 344455444443323345555567889999999999988864221 2689999999999887766532
Q ss_pred cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
+++.|+++..+|.++...++..|. +++.+|+++++++.+|+++|++++++. +.+|+++.++|+||.+-
T Consensus 114 ---~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~~ 181 (385)
T 1b5p_A 114 ---PGDEVIVLSPYWVSYPEMVRFAGG---VVVEVETLPEEGFVPDPERVRRAITPR------TKALVVNSPNNPTGAVY 181 (385)
T ss_dssp ---TTCEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGGTTCCCHHHHHTTCCTT------EEEEEEESSCTTTCCCC
T ss_pred ---CCCEEEEcCCCchhHHHHHHHcCC---EEEEeecCcccCCCCCHHHHHHhcCCC------CEEEEEeCCCCCCCCCc
Confidence 577888888999999999999999 999999975335789999999988643 34778889999999985
Q ss_pred C---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhc
Q 037144 251 P---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-CVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLS 325 (502)
Q Consensus 251 p---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~ 325 (502)
| +++|+++|++||+++++|++|+.+.... .... +..+. ..+.+..+++|+++.| ...|+++.++ .... .+.
T Consensus 182 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~-~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~-~~~~-~l~ 257 (385)
T 1b5p_A 182 PKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFS-PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPK-EVIK-AMA 257 (385)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCC-GGGTCTTTEEEEEESTTTTTCGGGCCEEEECCH-HHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCC-HHHcCCCCEEEEEechhhcCCcccceEEEEeCH-HHHH-HHH
Confidence 5 9999999999999999999998754421 1111 11111 3456778899999754 3478887743 3322 221
Q ss_pred CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-----cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144 326 TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-----GVANLRNFIRSHVGMAKLFERLVTSDKRFE 400 (502)
Q Consensus 326 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g~~g~~~~~~~~~~la~~l~~~l~~~~~~~ 400 (502)
....+... ....+..+++...+ +.+.+++..+++.++++++.+.|+++ +++
T Consensus 258 ~~~~~~~~-----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 313 (385)
T 1b5p_A 258 SVSRQSTT-----------------------SPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLK 313 (385)
T ss_dssp HHHHTTTC-----------------------SCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCC
T ss_pred HHHhhccC-----------------------CCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCe
Confidence 10000000 01223333333333 35567788888999999999999887 787
Q ss_pred EecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEec
Q 037144 401 VAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAG 479 (502)
Q Consensus 401 l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~ 479 (502)
+. ++..+.+.| .+...+. + ..++.+.|.+.|..+.++..+....++|++++
T Consensus 314 ~~-~~~~~~~~~~~~~~~~~-------------------------~--~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~ 365 (385)
T 1b5p_A 314 AV-RPSGAFYVLMDTSPIAP-------------------------D--EVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA 365 (385)
T ss_dssp BC-CCSBTTEEEEECTTTCS-------------------------S--HHHHHHHHHHTTEECEESGGGTCTTEEEEECC
T ss_pred ec-CCCeeEEEEEecCCCCC-------------------------C--HHHHHHHHHHCCeEEecccccCCCCeEEEEec
Confidence 65 444443333 3321110 0 24566777767865544433332468999986
Q ss_pred CCCCcHHHHHHHHHHHHHHHH
Q 037144 480 NSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 480 ~~~t~~~di~~~~~~l~~~~~ 500 (502)
+++++|+++++.|.++.+
T Consensus 366 ---~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 366 ---TSEENLRKALERFARVLG 383 (385)
T ss_dssp ---SCHHHHHHHHHHGGGGC-
T ss_pred ---CCHHHHHHHHHHHHHHHh
Confidence 577799999998877654
No 85
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.91 E-value=1.3e-24 Score=219.39 Aligned_cols=307 Identities=11% Similarity=0.015 Sum_probs=196.7
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhH-
Q 037144 111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAF- 188 (502)
Q Consensus 111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~- 188 (502)
++.+.++-.++++.+++++|.++.. ..+| |+|||+++.+++..... +++.+++...+|++.
T Consensus 67 ~~~~~~~~~~ar~~la~ll~~~~~~------evif~t~~~T~a~n~ai~~l~~-----------~gd~v~~~~~~~~~~~ 129 (386)
T 3qm2_A 67 GKEFIQVAEEAEQDFRDLLNIPSNY------KVLFCHGGGRGQFAGVPLNLLG-----------DKTTADYVDAGYWAAS 129 (386)
T ss_dssp ------CCHHHHHHHHHHHTCCTTE------EEEEEESCTTHHHHHHHHHHCT-----------TCCEEEEEESSHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHHHHHHHHhccC-----------CCCeEEEEeCCHHHHH
Confidence 4556677778999999999997532 5787 79999999877665422 334443333355542
Q ss_pred -HHHHHHcCCCCCCEEEEecC--CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-CChhHHHHHHHHhCC
Q 037144 189 -QKAAQIVGIDRKNIRAIKTT--KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-DPLKPLCDVAKQFGI 264 (502)
Q Consensus 189 -~~aa~~~Glg~~~v~~v~~~--~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-dpl~eI~~i~~~~g~ 264 (502)
.+.++.. | .+..+|++ ..+ ..+++++++++|+++++ +|++++.+|.+|.+ +||++|+ +|+
T Consensus 130 ~~~~a~~~--G--~v~~v~~~~~~~G-~~~~~~~~~~~l~~~t~------lV~~~h~et~tG~~i~pi~~i~-----~g~ 193 (386)
T 3qm2_A 130 AIKEAKKY--C--APQIIDAKITVDG-KRAVKPMREWQLSDNAA------YLHYCPNETIDGIAIDETPDFG-----PEV 193 (386)
T ss_dssp HHHHHTTT--S--EEEEEECEEEETT-EEEECCGGGCCCCTTCS------CEEECSEETTTTEECCCCCCCC-----TTC
T ss_pred HHHHHHHh--C--CeEEEecCcccCC-CCCCchHHHhhcCCCCc------EEEEECCcCCcCEecCchhhhc-----CCC
Confidence 2233333 3 58889987 322 13788888877765543 78899999999995 9999996 799
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144 265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE 344 (502)
Q Consensus 265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 344 (502)
++|||++++.+..+++-. ..|.+++++|||++ |.|+|++++|+... .......+.++...... +.
T Consensus 194 ~~~vDa~qs~g~~pidv~--------~~~~~~~s~hK~lG-P~G~g~l~v~~~~~-~~~~~~~p~~~~~~~~~----~~- 258 (386)
T 3qm2_A 194 VVTADFSSTILSAPLDVS--------RYGVIYAGAQKNIG-PAGLTLVIVREDLL-GKAHESCPSILDYTVLN----DN- 258 (386)
T ss_dssp CEEEECTTTTTSSCCCGG--------GCSEEEEETTTTTC-CTTEEEEEEEGGGC-SCCCTTSCGGGCHHHHH----HC-
T ss_pred EEEEEcccccCCCCCCcc--------ccCEEEEecccccC-CCccEEEEECHHHH-hhhcccCCcHHHHHHHh----hc-
Confidence 999999999888877632 34567899999995 99999999987642 11111112222100000 00
Q ss_pred cCCCcccccCCCCCCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCe-EEecCC--Ce-eEEEEEeecCcc
Q 037144 345 VGYKDWQITLCRRFRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERLVTSDKRF-EVAFPR--NF-SLVCFRVTPSAV 419 (502)
Q Consensus 345 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~~~-~l~~~~--~~-~~v~f~~~~~~~ 419 (502)
. ....+..-+....+..+++.+-.+ |++++.++..++++++++.|+++ ++ ....++ .+ .+++|.++..+.
T Consensus 259 -~---~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~rs~~iv~f~~~~~~~ 333 (386)
T 3qm2_A 259 -D---SMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRNDVAQANRSRMNVPFQLADNTL 333 (386)
T ss_dssp -----------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECCBCGGGBCSSEEEEEESSGGG
T ss_pred -C---CCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHcCceEEEEECCCccc
Confidence 0 000000012335666778877777 89999999999999999999998 55 332222 33 478898864211
Q ss_pred hhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 420 MDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
...+...|.+.|.+...+ ....+.+|+|+.++ ++++|||++++.|+++.
T Consensus 334 ----------------------------~~~~~~~L~~~gI~~~~g--~~~~~~iRiS~~~~-~t~edId~l~~~l~~~~ 382 (386)
T 3qm2_A 334 ----------------------------DKVFLEESFAAGLHALKG--HRVVGGMRASIYNA-MPIEGVKALTDFMIDFE 382 (386)
T ss_dssp ----------------------------HHHHHHHHHHTTEECCBC--CTTTCSEEEECCTT-SCHHHHHHHHHHHHHHH
T ss_pred ----------------------------cHHHHHHHHHCCCEEeCC--CCCcCeEEEEcCCC-CCHHHHHHHHHHHHHHH
Confidence 124555566778643222 12123499998654 67779999999999987
Q ss_pred Hh
Q 037144 500 EA 501 (502)
Q Consensus 500 ~~ 501 (502)
++
T Consensus 383 ~~ 384 (386)
T 3qm2_A 383 RR 384 (386)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 86
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.91 E-value=1.4e-22 Score=212.79 Aligned_cols=334 Identities=10% Similarity=0.049 Sum_probs=219.4
Q ss_pred CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCC
Q 037144 104 VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQ 183 (502)
Q Consensus 104 ~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~ 183 (502)
....|..+++..++++++.+|+.+..|.+... ...++|+|+++++..++.+.... +++.|+++..
T Consensus 126 ~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~~----------~gd~Vlv~~p 190 (500)
T 3tcm_A 126 ATGAYSHSQGIHGLRDAIASGIASRDGFPANA-----DDIFLTDGASPGVHLMMQLLIRN----------EKDGILVPIP 190 (500)
T ss_dssp CSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCG-----GGEEEESSSHHHHHHHHHHHCCS----------TTEEEEEEES
T ss_pred cCCCcCCCcChHHHHHHHHHHHHhhcCCCCCc-----ccEEEcCCHHHHHHHHHHHHcCC----------CCCEEEEeCC
Confidence 34567777888999999999999998865321 26899999999998777665311 6788999999
Q ss_pred CchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC---ChhHHHHHHH
Q 037144 184 THCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD---PLKPLCDVAK 260 (502)
Q Consensus 184 ~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id---pl~eI~~i~~ 260 (502)
.|.++..+++..|. +++.+++++++++.+|+++|+++|++..+++..+.+|+++.++|+||.+- ++++|+++|+
T Consensus 191 ~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~ 267 (500)
T 3tcm_A 191 QYPLYSASIALHGG---ALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCK 267 (500)
T ss_dssp CCTHHHHHHHHTTC---EEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred CcHhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHH
Confidence 99999999999999 99999998766689999999999998766666677888889999999994 4777788899
Q ss_pred HhCCEEEeecccccccccCc----cchhhhcCC----CCCCee-EEccCCcC-C-CCCcceEEEee--CchhhhhhhcCC
Q 037144 261 QFGIWVHVDAAYAGSACICP----EFRHFIDGV----ECVDSF-SFNPHKWL-F-TTLDCCCLWVK--DPSCLLSTLSTN 327 (502)
Q Consensus 261 ~~g~~lhVDaA~g~~~~~~~----~~~~~~~~~----~~aDsi-~~~~hK~l-~-~p~~~g~~~~r--~~~~l~~~~~~~ 327 (502)
+||+++++|.+|+.+.+... ........+ ...+.+ ..+++|.+ + ....+|++++. ++..........
T Consensus 268 ~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~ 347 (500)
T 3tcm_A 268 NEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIA 347 (500)
T ss_dssp HHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHH
T ss_pred HcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHH
Confidence 99999999999987654211 111111111 123334 44899998 3 23456777763 333322111100
Q ss_pred cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc------------HHHHHHHHHHHHHHHHHHHHHHhc
Q 037144 328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG------------VANLRNFIRSHVGMAKLFERLVTS 395 (502)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g------------~~g~~~~~~~~~~la~~l~~~l~~ 395 (502)
..+. ++ ..+..+++...+. .+...++.+++.++++++.+.|++
T Consensus 348 ~~~~----------------------~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~ 402 (500)
T 3tcm_A 348 SVNL----------------------CS---NITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNK 402 (500)
T ss_dssp HTTC----------------------CC---CHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hccc----------------------CC---CHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0000 00 1122222222221 234566778888999999999999
Q ss_pred CCCeEEecCCCeeEEEEE-eecCc-chhhhhhcccCCCcccccccchhHhhHHHHHHH-HHHHHhcCcEEEEeeeE---C
Q 037144 396 DKRFEVAFPRNFSLVCFR-VTPSA-VMDKLRTKYKNGTYDQYRQFSEEERTNEFNREL-LESINVSGKVFMTHAIV---G 469 (502)
Q Consensus 396 ~~~~~l~~~~~~~~v~f~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~~g~~~~~~~~~---~ 469 (502)
+||+++. +++.++++|. +..+. .... ........ ...+ .+.+.+.|.++.++..+ .
T Consensus 403 ~~g~~~~-~~~g~~~~~~~~~lp~~~~~~----------------~~~~g~~~-~~~~~~~ll~~~gI~v~pg~~f~~~~ 464 (500)
T 3tcm_A 403 LEGITCN-EAEGAMYVFPQICLPQKAIEA----------------AKAANKAP-DAFYALRLLESTGIVVVPGSGFGQVP 464 (500)
T ss_dssp STTEECC-CCCBTTEECCEECCCHHHHHH----------------HHHHTSCH-HHHHHHHHHHHHCEECEESTTTCCCT
T ss_pred CCCcEEe-cCCeEEEEeeeecCchhhHHH----------------HHhcCCCc-HHHHHHHHHHHCCEEEEeCcccCCCC
Confidence 9999986 5666666653 22110 0000 00000000 1122 24444568765544332 3
Q ss_pred CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 470 GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 470 g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+..++|++++ .++++|++++++|.++.++
T Consensus 465 g~~~iRis~~---~~~e~i~~~i~~l~~~~~~ 493 (500)
T 3tcm_A 465 GTWHFRCTIL---PQEDKIPAVISRFTVFHEA 493 (500)
T ss_dssp TCCBEEEESC---SCTTTHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEC---CCHHHHHHHHHHHHHHHHH
Confidence 4668999987 4566899999999887654
No 87
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.91 E-value=2e-22 Score=208.84 Aligned_cols=335 Identities=12% Similarity=0.067 Sum_probs=221.3
Q ss_pred HHHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 037144 89 VAGIVGEMLSSGFNVV---GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL 165 (502)
Q Consensus 89 ~~~~~~~~l~~~~n~~---~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~ 165 (502)
++..+.+.+...+... ...|....+..++++.+.+++.+.+|.+ .. ...++|+|+++++..++.+..+
T Consensus 92 p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~-----~~v~~t~G~~~al~~~~~~l~~--- 162 (448)
T 3aow_A 92 PKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGIS-QD-----NDIMITSGSQQALDLIGRVFLN--- 162 (448)
T ss_dssp CHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCC-TT-----SEEEEESSHHHHHHHHHHHHCC---
T ss_pred CHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcC-Ch-----hhEEEeCcHHHHHHHHHHHHcC---
Confidence 3455555555555332 2345555667889999999998888984 21 2689999999999887776543
Q ss_pred HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEE-EEecCCc
Q 037144 166 KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFL-CATVGTT 244 (502)
Q Consensus 166 ~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~V-v~t~gtt 244 (502)
+++.|++...+|.++..+++..|. +++.+|+++ + .+|+++|+++|+.....+.++.+| +.+.++|
T Consensus 163 --------~Gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~--~-g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~N 228 (448)
T 3aow_A 163 --------PGDIVVVEAPTYLAALQAFNFYEP---QYIQIPLDD--E-GMKVEILEEKLKELKSQGKKVKVVYTVPTFQN 228 (448)
T ss_dssp --------TTCEEEEEESCCHHHHHHHHTTCC---EEEEEEEET--T-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCT
T ss_pred --------CCCEEEEeCCChHHHHHHHHHcCC---EEEEeccCC--C-CCCHHHHHHHHhhhhccCCCCeEEEECCCCCC
Confidence 567888899999999999999999 999999975 2 399999999997322122235565 5678899
Q ss_pred cccccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhc-CCCCCCeeEEccCCcCCCCCcceEEEeeCchhh
Q 037144 245 AITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID-GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCL 320 (502)
Q Consensus 245 ~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~-~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l 320 (502)
++|.+-| +++|+++|++||+++++|++|+.+.+.......... ...+.+.+..+++|+++....+|+++.+ +...
T Consensus 229 PtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~-~~l~ 307 (448)
T 3aow_A 229 PAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGD-PGII 307 (448)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCGGGCCEEEEEC-HHHH
T ss_pred CcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhccccccEEEEEeC-HHHH
Confidence 9999866 579999999999999999999876542211111100 1123456778899999833457888876 3332
Q ss_pred hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--c--HHHHHHHHHHHHHHHHHHHHHHhc-
Q 037144 321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--G--VANLRNFIRSHVGMAKLFERLVTS- 395 (502)
Q Consensus 321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g--~~g~~~~~~~~~~la~~l~~~l~~- 395 (502)
. .+....... +. ++ ..+..+++...+ + .+.+.++.+++.++++++.+.|++
T Consensus 308 ~-~l~~~~~~~-------------------~~-~~---~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 363 (448)
T 3aow_A 308 R-KMEIAKQST-------------------DL-CT---NVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEF 363 (448)
T ss_dssp H-HHHHHHHHH-------------------HS-SC---CHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHh-------------------cC-CC---CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 221110000 00 00 223333333333 2 345677778888999999999987
Q ss_pred CC-CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE----CC
Q 037144 396 DK-RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV----GG 470 (502)
Q Consensus 396 ~~-~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g 470 (502)
+| ++++..+....++++.++. .. + ..++.+++.++|..+.++..+ .+
T Consensus 364 ~~~g~~~~~p~~g~~~~v~~~~-~~-------------------------~--~~~l~~~l~~~gV~v~pg~~f~~~~~~ 415 (448)
T 3aow_A 364 MPEGVKWTKPEGGMFIWVTLPD-GI-------------------------D--SKKMLERAIKKGVAYVPGEAFYAHRDV 415 (448)
T ss_dssp CCTTCEECCCSBSSEEEEECST-TC-------------------------C--HHHHHHHHHHTTEECEEGGGGSTTCCC
T ss_pred CCCCeEEeCCCccEEEEEEcCC-CC-------------------------C--HHHHHHHHHHCCcEEEcchhhcCCCCC
Confidence 57 6887644334455555532 11 0 245677777788765554333 24
Q ss_pred EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 471 IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 471 ~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..++|++++.. ++++|+++++.|.++.++
T Consensus 416 ~~~iRls~~~~--~~e~i~~~~~~L~~~l~~ 444 (448)
T 3aow_A 416 KNTMRLNFTYV--DEDKIMEGIKRLAETIKE 444 (448)
T ss_dssp CSEEEEECSSS--CTHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCC--CHHHHHHHHHHHHHHHHH
Confidence 57899998643 567999999999987754
No 88
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.91 E-value=5.7e-23 Score=207.54 Aligned_cols=323 Identities=12% Similarity=0.042 Sum_probs=216.2
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (502)
..+.+.+...+......|.. .. .++++.+.+++.+.+|.+... ...++|+||++|+..++.+...
T Consensus 39 ~~v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~-----~~i~~t~g~~~a~~~~~~~~~~-------- 103 (377)
T 3fdb_A 39 PAVLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARP-----EWIFPIPDVVRGLYIAIDHFTP-------- 103 (377)
T ss_dssp HHHHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSC--------
T ss_pred HHHHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCH-----HHEEEeCChHHHHHHHHHHhcC--------
Confidence 34555555555433334544 33 678999999999988865321 2689999999999887776532
Q ss_pred cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
+++.|+++..+|.++...++..|. +++.+|+++ + +|+++|++++++.+ .+|+++.++|++|.+-
T Consensus 104 ---~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~--~--~d~~~l~~~l~~~~------~~v~i~~p~nptG~~~ 167 (377)
T 3fdb_A 104 ---AQSKVIVPTPAYPPFFHLLSATQR---EGIFIDATG--G--INLHDVEKGFQAGA------RSILLCNPYNPLGMVF 167 (377)
T ss_dssp ---TTCCEEEEESCCTHHHHHHHHHTC---CEEEEECTT--S--CCHHHHHHHHHTTC------CEEEEESSBTTTTBCC
T ss_pred ---CCCEEEEcCCCcHhHHHHHHHcCC---EEEEccCCC--C--CCHHHHHHHhccCC------CEEEEeCCCCCCCCCC
Confidence 566788888999999999999999 999999985 2 99999999997643 3788888999999996
Q ss_pred C---hhHHHHHHHHhCCEEEeecccccccccC-ccchhhhcCC--CCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhh
Q 037144 251 P---LKPLCDVAKQFGIWVHVDAAYAGSACIC-PEFRHFIDGV--ECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLST 323 (502)
Q Consensus 251 p---l~eI~~i~~~~g~~lhVDaA~g~~~~~~-~~~~~~~~~~--~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~ 323 (502)
| +++|+++|++||+++++|++|+.+.... ..... +..+ ...+.+..+++|+++ .....|++++.++.... .
T Consensus 168 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~-~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~-~ 245 (377)
T 3fdb_A 168 APEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAA-GVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAE-H 245 (377)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGG-GSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCccc-HHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHH-H
Confidence 4 6677778999999999999998755432 11111 1111 123367788999996 44567877776654432 2
Q ss_pred hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-CCCeE
Q 037144 324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTS-DKRFE 400 (502)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~-~~~~~ 400 (502)
+.....+... ....+..+++...+ +.+.++++.++..++++++.+.|++ +|+++
T Consensus 246 ~~~~~~~~~~-----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 302 (377)
T 3fdb_A 246 WQQLSPVIKD-----------------------GASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAK 302 (377)
T ss_dssp HHHSCHHHHC-----------------------CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCE
T ss_pred HHHHHHhhcC-----------------------CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCce
Confidence 2111111100 01223333333332 4567888999999999999999988 88999
Q ss_pred EecCCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC--CEEEEEE
Q 037144 401 VAFPRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--GIYVLRF 476 (502)
Q Consensus 401 l~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lR~ 476 (502)
+. ++..+++. +.+...+. ..++.+.+.++ |..+.++..+. +..++|+
T Consensus 303 ~~-~~~~~~~~~~~~~~~~~----------------------------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ri 353 (377)
T 3fdb_A 303 IT-PMQATYLMWIDFRDTTI----------------------------EGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRL 353 (377)
T ss_dssp EC-CCSBCSEEEEECTTSCC----------------------------CSCHHHHHHHHHCEECEEGGGGCGGGTTEEEE
T ss_pred Ee-cCCeeEEEEEECcccCC----------------------------CHHHHHHHHHhCCEEecCChhccCCCCCEEEE
Confidence 87 44445553 44432111 01344455544 76544333222 2578999
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 477 AAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 477 ~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+++ +++++|+++++.|.++.++
T Consensus 354 s~~---~~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 354 NFA---TSREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp ECC---SCHHHHHHHHHHHHHHHTT
T ss_pred EeC---CCHHHHHHHHHHHHHHHhh
Confidence 987 3678999999999998765
No 89
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.91 E-value=2.8e-23 Score=209.52 Aligned_cols=316 Identities=12% Similarity=0.078 Sum_probs=215.5
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+......|...++..++++.+.+|+.+.+|.+... ...++|+||++++..++.+...
T Consensus 44 ~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~------- 111 (370)
T 2z61_A 44 PKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIP-----DNIIITGGSSLGLFFALSSIID------- 111 (370)
T ss_dssp CHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCG-----GGEEEESSHHHHHHHHHHHHCC-------
T ss_pred CHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----hhEEECCChHHHHHHHHHHhcC-------
Confidence 3445555555554333445555567899999999999988864321 2689999999999888776632
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|+++..+|.++..+++..|. +++.+| +|+++|+++++++ +.+|+++.++|++|.+
T Consensus 112 ----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~--------~d~~~l~~~l~~~------~~~v~~~~p~nptG~~ 170 (370)
T 2z61_A 112 ----DGDEVLIQNPCYPCYKNFIRFLGA---KPVFCD--------FTVESLEEALSDK------TKAIIINSPSNPLGEV 170 (370)
T ss_dssp ----TTCEEEEESSCCTHHHHHHHHTTC---EEEEEC--------SSHHHHHHHCCSS------EEEEEEESSCTTTCCC
T ss_pred ----CCCEEEEeCCCchhHHHHHHHcCC---EEEEeC--------CCHHHHHHhcccC------ceEEEEcCCCCCcCcc
Confidence 567888899999999999999999 888887 5889999988542 3467788899999999
Q ss_pred CChhHHHHHHHHhCCEEEeecccccccccCc--cchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcC
Q 037144 250 DPLKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLST 326 (502)
Q Consensus 250 dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~--~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~ 326 (502)
.|++ |.++|++||+++++|++|+.+..... .... +.+....|.++.++||+++.| ..+|+++.++ ... +.+..
T Consensus 171 ~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~-~~~~~ 246 (370)
T 2z61_A 171 IDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIE-FDENLEKTILINGFSKLYAMTGWRIGYVISND-EII-EAILK 246 (370)
T ss_dssp CCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGG-TCTTCSSEEEEEESTTTTTCGGGCCEEEECCH-HHH-HHHHH
T ss_pred cCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHH-ccCCCCcEEEEecChhccCCccceEEEEEECH-HHH-HHHHH
Confidence 9999 99999999999999999987654211 1111 112336788999999999633 3478887765 322 22211
Q ss_pred CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144 327 NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF 403 (502)
Q Consensus 327 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~ 403 (502)
....... ....+..+++...+ +.++++++.++..++++++.+.|+++ ++++..
T Consensus 247 ~~~~~~~-----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 302 (370)
T 2z61_A 247 LQQNLFI-----------------------SAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-GWEVNN 302 (370)
T ss_dssp HHHHHTS-----------------------SSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCCC
T ss_pred HHhhccc-----------------------CCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecC
Confidence 0000000 01223333333333 45667888889999999999999988 787753
Q ss_pred CCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEEEec
Q 037144 404 PRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRFAAG 479 (502)
Q Consensus 404 ~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~ 479 (502)
+..+++.+ .+... ..++.+++. +.|..+..+..+. +..++|++++
T Consensus 303 -~~~~~~~~~~~~~~------------------------------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~ 351 (370)
T 2z61_A 303 -PIGAYYVFPNIGED------------------------------GREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA 351 (370)
T ss_dssp -CCBTTEECCBCSSC------------------------------HHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC
T ss_pred -CCcceEEEEecCCC------------------------------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe
Confidence 44444333 33211 235566665 5686544432222 3568999987
Q ss_pred CCCCcHHHHHHHHHHHHHHHH
Q 037144 480 NSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 480 ~~~t~~~di~~~~~~l~~~~~ 500 (502)
+++++|+++++.|.++.+
T Consensus 352 ---~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 352 ---NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp ---SCHHHHHHHHHHHHHHHC
T ss_pred ---CCHHHHHHHHHHHHHHHh
Confidence 477799999999988764
No 90
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.91 E-value=6.2e-23 Score=210.33 Aligned_cols=342 Identities=12% Similarity=0.059 Sum_probs=220.4
Q ss_pred HHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHh------cCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHH
Q 037144 90 AGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQM------LDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARD 162 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l------~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~ 162 (502)
+..+.+.+...+... ...|....+..++++.+.+|+.+. .|.+... ..+++|+||++++..++.+...
T Consensus 52 ~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~-----~~v~~~~g~~~al~~~~~~l~~ 126 (416)
T 1bw0_A 52 SAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVK-----DNVVLCSGGSHGILMAITAICD 126 (416)
T ss_dssp CHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCG-----GGEEEESHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCc-----ceEEEeCChHHHHHHHHHHhCC
Confidence 344555555444322 234544456788999999998843 3332111 2689999999999877776532
Q ss_pred HHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecC
Q 037144 163 RVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVG 242 (502)
Q Consensus 163 ~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g 242 (502)
+++.|+++..+|.++..+++..|+ +++.+|+++++++.+|+++|++++++. +.+|+++.+
T Consensus 127 -----------~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p 186 (416)
T 1bw0_A 127 -----------AGDYALVPQPGFPHYETVCKAYGI---GMHFYNCRPENDWEADLDEIRRLKDDK------TKLLIVTNP 186 (416)
T ss_dssp -----------TTCEEEEEESCCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHHHCCTT------EEEEEEESS
T ss_pred -----------CCCEEEEcCCCcHhHHHHHHHcCc---EEEEeecCcccCCCCCHHHHHHHhccC------CeEEEEeCC
Confidence 567888888999999999999999 999999875334689999999988643 346777889
Q ss_pred CccccccCC---hhHHHHHHHHhCCEEEeecccccccccCc----cchhhhcCCCC--CCeeEEccCCcCCCC-CcceEE
Q 037144 243 TTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICP----EFRHFIDGVEC--VDSFSFNPHKWLFTT-LDCCCL 312 (502)
Q Consensus 243 tt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~----~~~~~~~~~~~--aDsi~~~~hK~l~~p-~~~g~~ 312 (502)
+|++|.+.| +++|+++|++||+++++|++|+.+.+... .... +..+.. .+.++.++||+++.| ..+|++
T Consensus 187 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~ 265 (416)
T 1bw0_A 187 SNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTS-VADFETTVPRVILGGTAKNLVVPGWRLGWL 265 (416)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCC-TTSSCCSCCEEEEEESTTTTSCGGGCCEEE
T ss_pred CCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccC-HHHccCCCcEEEEecchhhCCCCCceEEEE
Confidence 999999988 99999999999999999999987543221 1111 122211 135567899998655 457888
Q ss_pred EeeCc-hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 037144 313 WVKDP-SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFER 391 (502)
Q Consensus 313 ~~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~ 391 (502)
+++++ ............+.... + +........+..+++..+.++++++.++..++++++.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~---------------~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 327 (416)
T 1bw0_A 266 LYVDPHGNGPSFLEGLKRVGMLV---------------C---GPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYN 327 (416)
T ss_dssp EEECTTCSCHHHHHHHHHHHHHH---------------T---CSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeCchhhHHHHHHHHHHHhccc---------------c---CCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 88764 22111110000000000 0 00001122333344433567888999999999999999
Q ss_pred HHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECC
Q 037144 392 LVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGG 470 (502)
Q Consensus 392 ~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g 470 (502)
.|+++|++++..+....++.+.+...... +.. ...++.+++. +.|..+.++..+..
T Consensus 328 ~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-------------------~~~----~~~~~~~~l~~~~gi~v~~g~~f~~ 384 (416)
T 1bw0_A 328 HIGECIGLAPTMPRGAMYLMSRIDLEKYR-------------------DIK----TDVEFFEKLLEEENVQVLPGTIFHA 384 (416)
T ss_dssp HHTTSTTEEECCCCBTTEEEEEECGGGBS-------------------SCC----SHHHHHHHHHHHHCEECEEGGGGTC
T ss_pred HHHhCCCCcccCCCeeEEEEEeCCHHHcC-------------------CCC----CHHHHHHHHHHHCCEEEecccccCC
Confidence 99998899876443344555555321000 000 0234556653 56875554443433
Q ss_pred EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 471 IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 471 ~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..++|++++ +++++++++++.|.++.++
T Consensus 385 ~~~iRis~~---~~~e~l~~~l~~l~~~l~~ 412 (416)
T 1bw0_A 385 PGFTRLTTT---RPVEVYREAVERIKAFCQR 412 (416)
T ss_dssp TTEEEEECC---SCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEec---CCHHHHHHHHHHHHHHHHH
Confidence 568999984 4677999999999887654
No 91
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.91 E-value=1.9e-23 Score=211.57 Aligned_cols=320 Identities=10% Similarity=0.050 Sum_probs=211.1
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+.. ...|...+...++++. +++++|.+.+ .+++|+||++++..++.+...
T Consensus 40 ~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~----la~~~~~~~~-------~v~~~~g~~~a~~~~~~~~~~------- 100 (381)
T 1v2d_A 40 PPFLLEAVRRALGR-QDQYAPPAGLPALREA----LAEEFAVEPE-------SVVVTSGATEALYVLLQSLVG------- 100 (381)
T ss_dssp CHHHHHHHHHHTTT-SCSCCCTTCCHHHHHH----HHHHHTSCGG-------GEEEESSHHHHHHHHHHHHCC-------
T ss_pred CHHHHHHHHHHHHH-hcCCCCCCCCHHHHHH----HHHhcCCChh-------hEEEcCChHHHHHHHHHHhCC-------
Confidence 34455666665544 3345544455666655 5555777654 589999999999888876642
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecC--CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTT--KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~--~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
+++.|+++..+|.++..+++..|+ +++.+|++ ++ ++.+|+++|+++++++ +.+|+++.++|++|
T Consensus 101 ----~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG 166 (381)
T 1v2d_A 101 ----PGDEVVVLEPFFDVYLPDAFLAGA---KARLVRLDLTPE-GFRLDLSALEKALTPR------TRALLLNTPMNPTG 166 (381)
T ss_dssp ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEEETT-EEECCHHHHHTTCCTT------EEEEEEESSCTTTC
T ss_pred ----CCCEEEEcCCCchhHHHHHHHcCC---EEEEEeCCCCCc-cCCcCHHHHHHhcCcC------CEEEEECCCCCCCC
Confidence 567888889999999999999999 99999986 32 4789999999988532 45788889999999
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhh
Q 037144 248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLST 323 (502)
Q Consensus 248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~ 323 (502)
.+-| +++|+++|++||+++|+|++|+++.+ .........-..+.|.++.++||+++.| ..+|++++++. ... .
T Consensus 167 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~-~~~-~ 243 (381)
T 1v2d_A 167 LVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKE-FMP-R 243 (381)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTT-THH-H
T ss_pred CccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHH-HHH-H
Confidence 9865 89999999999999999999987654 2111111100236889999999998744 34888887543 222 2
Q ss_pred hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
+.....+.. ++ ........+..+++... .++++++.++..++++++.+.|++. ++++.
T Consensus 244 ~~~~~~~~~-----------------~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 302 (381)
T 1v2d_A 244 LAGMRQWTS-----------------FS---APTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLRVY 302 (381)
T ss_dssp HHHHHHHHT-----------------SS---CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCCEE
T ss_pred HHHHHhhcc-----------------cC---CCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC-CCEec
Confidence 211000000 00 00001122223333221 4567888999999999999999985 88887
Q ss_pred cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC----CEEEEEEEe
Q 037144 403 FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG----GIYVLRFAA 478 (502)
Q Consensus 403 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----g~~~lR~~~ 478 (502)
.+....++++.+.+. + +.+.+.+.|..+.++..+. +..++|+++
T Consensus 303 ~~~~~~~~~~~~~~~---------------------------~-----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~ 350 (381)
T 1v2d_A 303 VPEGTYFLMAELPGW---------------------------D-----AFRLVEEARVALIPASAFYLEDPPKDLFRFAF 350 (381)
T ss_dssp CCSBSSEEEEECTTC---------------------------C-----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEEC
T ss_pred CCCcceEEEEecChH---------------------------h-----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEe
Confidence 543333444444210 1 3344555676544433332 356899998
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHh
Q 037144 479 GNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 479 ~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+. ++++|+++++.|.++.++
T Consensus 351 ~~---~~~~i~~~~~~l~~~l~~ 370 (381)
T 1v2d_A 351 CK---TEEELHLALERLGRVVNS 370 (381)
T ss_dssp CS---CHHHHHHHHHHHHHHC--
T ss_pred CC---CHHHHHHHHHHHHHHHhh
Confidence 64 677999999999887653
No 92
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.91 E-value=5.3e-23 Score=207.19 Aligned_cols=287 Identities=12% Similarity=0.069 Sum_probs=200.5
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR 199 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~ 199 (502)
++++++++++|.+.. ...++|+|||+++..++.+... +++.|+++..+|.++..+++..|.
T Consensus 71 ~l~~~la~~~g~~~~------~~i~~~~g~t~a~~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~g~-- 131 (367)
T 3euc_A 71 ALRAKLKEVMQVPAG------MEVLLGNGSDEIISMLALAAAR-----------PGAKVMAPVPGFVMYAMSAQFAGL-- 131 (367)
T ss_dssp HHHHHHHHHHTCCTT------CEEEEEEHHHHHHHHHHHHTCC-----------TTCEEEEEESCSCCSCHHHHTTTC--
T ss_pred HHHHHHHHHhCCCCc------ceEEEcCCHHHHHHHHHHHHcC-----------CCCEEEEcCCCHHHHHHHHHHcCC--
Confidence 455667778888322 1689999999999877765532 567888888999999999999999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHH-HHhcCCccEEEEEecCCcccccc---CChhHHHHHHHHh--CCEEEeecccc
Q 037144 200 KNIRAIKTTKSSSYGLSAESVLSQINL-DVEAELIPLFLCATVGTTAITAV---DPLKPLCDVAKQF--GIWVHVDAAYA 273 (502)
Q Consensus 200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~-~~~~g~~p~~Vv~t~gtt~~G~i---dpl~eI~~i~~~~--g~~lhVDaA~g 273 (502)
+++.+|+++ ++.+|+++|++++++ ++ .+|+++.++|++|.+ +++++|+++|++| |+++++|++|+
T Consensus 132 -~~~~v~~~~--~~~~d~~~l~~~l~~~~~------~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~ 202 (367)
T 3euc_A 132 -EFVGVPLRA--DFTLDRGAMLAAMAEHQP------AIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQ 202 (367)
T ss_dssp -EEEEEECCT--TSCCCHHHHHHHHHHHCC------SEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTC
T ss_pred -eEEEecCCC--CCCCCHHHHHHHhhccCC------CEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcch
Confidence 999999986 579999999999987 33 377888999999999 4688888889999 99999999998
Q ss_pred cccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144 274 GSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT 353 (502)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 353 (502)
.+... .....+. ....+.+..++||++..+.+.|+++. ++............| +
T Consensus 203 ~~~~~--~~~~~~~-~~~~~i~~~s~sK~~~~G~r~G~~~~-~~~~~~~~~~~~~~~--------------------~-- 256 (367)
T 3euc_A 203 PFAQE--SWMSRLT-DFGNLLVMRTVSKLGLAGIRLGYVAG-DPQWLEQLDKVRPPY--------------------N-- 256 (367)
T ss_dssp CSSSC--CSGGGGG-TCTTEEEEEECCCTTSCSCCEEEEEE-CHHHHHHHGGGCCSS--------------------C--
T ss_pred hhccc--chHHHHh-hCCCEEEEecchhhcccccCceeeee-CHHHHHHHHHhCCCC--------------------C--
Confidence 64321 1111111 12345777889999444556777776 333322211111000 0
Q ss_pred CCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144 354 LCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTY 432 (502)
Q Consensus 354 ~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 432 (502)
...+..+++...+. .+++.++.++..++++++.+.|+++|++++. ++..+++.+.+. .
T Consensus 257 ----~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~-~--------------- 315 (367)
T 3euc_A 257 ----VNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVF-PSAANFLLARVP-D--------------- 315 (367)
T ss_dssp ----CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEEC-CCSSSEEEEECS-C---------------
T ss_pred ----CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC-C---------------
Confidence 12333333333332 5667889999999999999999999999954 555566666553 1
Q ss_pred ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE--CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV--GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
..++.+.|.++|..+.++..+ .+..++|++++ +++++++++++|+++.+
T Consensus 316 ---------------~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~----~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 316 ---------------AAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS----TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp ---------------HHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC----CHHHHHHHHHHHHHHTC
T ss_pred ---------------HHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC----CHHHHHHHHHHHHHHhc
Confidence 245677777778754433322 13468999975 67799999999998764
No 93
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.91 E-value=5.5e-23 Score=211.51 Aligned_cols=333 Identities=9% Similarity=0.036 Sum_probs=219.4
Q ss_pred HHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHhcCCC-CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 037144 90 AGIVGEMLSSGFNVV---GLDWISSPAAVELENIVMDWLGQMLDLP-KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL 165 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~le~~~~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~ 165 (502)
+..+.+.+...+... ...|....+..++++++.+|+.+.+|.+ ... ...++|+|+++++..++.+...
T Consensus 60 ~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~-----~~v~~t~G~~~al~~~~~~l~~--- 131 (425)
T 1vp4_A 60 RKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDE-----DNLIFTVGSQQALDLIGKLFLD--- 131 (425)
T ss_dssp HHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCG-----GGEEEEEHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCc-----ccEEEeccHHHHHHHHHHHhCC---
Confidence 445566665555332 2345555567899999999998888853 111 1689999999999877766532
Q ss_pred HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc--CCccEEE-EEecC
Q 037144 166 KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA--ELIPLFL-CATVG 242 (502)
Q Consensus 166 ~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~--g~~p~~V-v~t~g 242 (502)
+++.|++...+|.++..+++..|. +++.+|+++ + .+|+++|+++|++..++ +..+.+| +.+.+
T Consensus 132 --------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~--~-~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~ 197 (425)
T 1vp4_A 132 --------DESYCVLDDPAYLGAINAFRQYLA---NFVVVPLED--D-GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNF 197 (425)
T ss_dssp --------TTCEEEEEESCCHHHHHHHHTTTC---EEEEEEEET--T-EECHHHHHHHHHHHHHTTCGGGEEEEEEECSS
T ss_pred --------CCCEEEEeCCCcHHHHHHHHHcCC---EEEEeccCC--C-CCCHHHHHHHHHhhhhcccCCCceEEEECCCC
Confidence 567888888999999999999999 999999875 2 39999999999863211 1124465 57789
Q ss_pred CccccccCC---hhHHHHHHHHhCCEEEeecccccccccCc---cchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeC
Q 037144 243 TTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICP---EFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKD 316 (502)
Q Consensus 243 tt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~---~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~ 316 (502)
+|++|.+-| +++|+++|++||+++++|++|+.+..... .... +. ....+.++.+++|+++....+|+++++
T Consensus 198 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~-~~-~~~~~i~~~s~sK~~~~G~r~G~~~~~- 274 (425)
T 1vp4_A 198 HNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFK-IG-GPERVVLLNTFSKVLAPGLRIGMVAGS- 274 (425)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHH-HH-CTTTEEEEEESTTTTCGGGCEEEEECC-
T ss_pred CCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHH-hC-CCCCEEEEeccccccccccceEEEeeC-
Confidence 999999965 67899999999999999999987654221 1111 11 123457788999999833457888876
Q ss_pred chhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--c--HHHHHHHHHHHHHHHHHHHHH
Q 037144 317 PSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--G--VANLRNFIRSHVGMAKLFERL 392 (502)
Q Consensus 317 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g--~~g~~~~~~~~~~la~~l~~~ 392 (502)
+.... .+....... +. + ...+..+++...+ + .+.++++.++..++++++.+.
T Consensus 275 ~~~~~-~l~~~~~~~-------------------~~--~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 330 (425)
T 1vp4_A 275 KEFIR-KIVQAKQSA-------------------DL--C--SPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNA 330 (425)
T ss_dssp HHHHH-HHHHHHHHH-------------------HS--S--CCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHhhhh-------------------cC--C--CCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33322 221100000 00 0 0233344444433 2 345677788888999999999
Q ss_pred HhcC-C---CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE
Q 037144 393 VTSD-K---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV 468 (502)
Q Consensus 393 l~~~-~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~ 468 (502)
|++. | ++++..+....++++.++.. . + ..++.+.|.++|..+.++..+
T Consensus 331 L~~~~~~~~g~~~~~~~~g~~~~~~~~~~-~--------------------~-------~~~l~~~l~~~gi~v~~g~~f 382 (425)
T 1vp4_A 331 LEEYFSDIPGVKWVKSEGGLFIWLTLPEG-F--------------------D-------TWEMFEYAKRKKVFYVPGRVF 382 (425)
T ss_dssp HHHHSTTSTTCEECCCSBSSEEEEECCTT-C--------------------C-------TTTTHHHHHHHTEECEEGGGG
T ss_pred HHHhCCCCCceEEecCCccEEEEEEcCCC-C--------------------C-------HHHHHHHHHHCCCEEECchhh
Confidence 9873 5 68876444445666665421 0 0 124566666668655443333
Q ss_pred ----CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 469 ----GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 469 ----~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.+..++|++++.. ++++++++++.|.++.++
T Consensus 383 ~~~~~~~~~iRis~~~~--~~e~i~~~l~~l~~~l~~ 417 (425)
T 1vp4_A 383 KVYDEPSPSMRLSFCLP--PDEKIVEGIKRLREVVLE 417 (425)
T ss_dssp CTTCCCCSEEEEECSSS--CHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCeEEEEeCCC--CHHHHHHHHHHHHHHHHH
Confidence 1357899998753 678999999999887653
No 94
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.91 E-value=1.1e-23 Score=215.15 Aligned_cols=329 Identities=12% Similarity=0.045 Sum_probs=211.9
Q ss_pred HHHHHHHHHhhcCC-CCcccc------cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHH
Q 037144 90 AGIVGEMLSSGFNV-VGLDWI------SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARD 162 (502)
Q Consensus 90 ~~~~~~~l~~~~n~-~~~~~~------~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~ 162 (502)
+..+.+.+...+.. ....|. ..+....+|+.+++++++++|.+.. -+++++||+|+..++.++..
T Consensus 36 ~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~~--------~i~~~sGt~a~~~~~~~~~~ 107 (407)
T 2dkj_A 36 SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWA--------NVQPHSGSQANMAVYMALME 107 (407)
T ss_dssp CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCcc--------eEEecchHHHHHHHHHHhcC
Confidence 45566666665532 222222 2333346777777899999998642 35556678888888776632
Q ss_pred HHHHHhCccCCCCeEEEeCCCCchhH---HHHHHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEE
Q 037144 163 RVLKKIGRENISKLVVYSSDQTHCAF---QKAAQIVGIDRKNIRAIKTTKS-SSYGLSAESVLSQINLDVEAELIPLFLC 238 (502)
Q Consensus 163 ~~~~~~~~~~~~~~~v~~s~~~H~s~---~~aa~~~Glg~~~v~~v~~~~~-~~~~~d~~~Le~~i~~~~~~g~~p~~Vv 238 (502)
+++.|+++..+|.++ ..+++..|. .++.++++.+ +++.+|+++|++++++.. +.+|+
T Consensus 108 -----------~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-----~~~v~ 168 (407)
T 2dkj_A 108 -----------PGDTLMGMDLAAGGHLTHGSRVNFSGK---LYKVVSYGVRPDTELIDLEEVRRLALEHR-----PKVIV 168 (407)
T ss_dssp -----------TTCEEEEECGGGTCCGGGTCTTSHHHH---HSEEEEECCCTTTSSCCHHHHHHHHHHHC-----CSEEE
T ss_pred -----------CCCEEEEecccccCccchHHHHHhcCc---eEEEEecCCCcccCccCHHHHHHHHhhcC-----CeEEE
Confidence 567888888899776 355556665 5555555321 257899999999997521 22566
Q ss_pred EecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCch
Q 037144 239 ATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPS 318 (502)
Q Consensus 239 ~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~ 318 (502)
++.+++ |.+.|+++|.++|++||+++++|++|+.+....+.... .++..|+++.++||+++++.+ |+++++++.
T Consensus 169 ~~~p~~--~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~---~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~ 242 (407)
T 2dkj_A 169 AGASAY--PRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPN---PLPYAHVVTSTTHKTLRGPRG-GLILSNDPE 242 (407)
T ss_dssp ECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCC---CTTTCSEEEEESSGGGCCCSC-EEEEESCHH
T ss_pred Eecccc--CCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCC---ccccccEEEEeccccCCCCCc-eEEEECCHH
Confidence 655555 47889999999999999999999999875543322111 123579999999999987765 888876544
Q ss_pred hhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCC-chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144 319 CLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFR-SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK 397 (502)
Q Consensus 319 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 397 (502)
...........+.. .+.... ...+..+++.+..++++++.++..++++++.+.|++.
T Consensus 243 ~~~~l~~~~~~~~~---------------------~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 300 (407)
T 2dkj_A 243 LGKRIDKLIFPGIQ---------------------GGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR- 300 (407)
T ss_dssp HHHHHHHHHTTTTC---------------------SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHhhhccccc---------------------CCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-
Confidence 33221110001100 000001 1234455555445778899999999999999999998
Q ss_pred CeEEecC-CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee------ECC
Q 037144 398 RFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI------VGG 470 (502)
Q Consensus 398 ~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~------~~g 470 (502)
+++++.+ ...+++++.+...+. ....+.+.|.+.|..+..+.. ...
T Consensus 301 g~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~ 353 (407)
T 2dkj_A 301 GYRIVTGGTDNHLFLVDLRPKGL---------------------------TGKEAEERLDAVGITVNKNAIPFDPKPPRV 353 (407)
T ss_dssp TCEEGGGSCSSSEEEEECGGGTC---------------------------CHHHHHHHHHHTTEECEECCCTTCSSCTTT
T ss_pred CceeecCCCCceEEEEECcccCC---------------------------CHHHHHHHHHHcCceecCCcCccccccccC
Confidence 8988753 356677777643110 023566677677865443321 112
Q ss_pred EEEEEEEecCC---CCcHHHHHHHHHHHHHHHH
Q 037144 471 IYVLRFAAGNS---MTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 471 ~~~lR~~~~~~---~t~~~di~~~~~~l~~~~~ 500 (502)
..++|++++.+ ..+++++++++++|+++.+
T Consensus 354 ~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~ 386 (407)
T 2dkj_A 354 TSGIRIGTPAITTRGFTPEEMPLVAELIDRALL 386 (407)
T ss_dssp CSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHH
T ss_pred CCceeeecccccccCCCHHHHHHHHHHHHHHHh
Confidence 46899998542 2566799999999988765
No 95
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.91 E-value=3.7e-23 Score=210.70 Aligned_cols=326 Identities=10% Similarity=0.049 Sum_probs=217.6
Q ss_pred HHHHHHHHHhhcCCC----CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 037144 90 AGIVGEMLSSGFNVV----GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL 165 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~----~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~ 165 (502)
+..+.+.+...+... ...|...++..++++++.+|+.+.+|.+... ...++|+||++++..++.+...
T Consensus 50 ~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~-----~~i~~~~g~~~al~~~~~~l~~--- 121 (398)
T 3ele_A 50 PQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNA-----DNLYMTMGAAASLSICFRALTS--- 121 (398)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHHCC---
T ss_pred CHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCCh-----HHEEEccCHHHHHHHHHHHHcC---
Confidence 344555555544332 2345555666899999999999999964221 2689999999999888776643
Q ss_pred HHhCccCCCC-eEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144 166 KKIGRENISK-LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT 244 (502)
Q Consensus 166 ~~~~~~~~~~-~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt 244 (502)
++ +.|+++..+|.++..+++..|+ +++.+|++++ ++.+|+++|+++++++ +.+|+++.++|
T Consensus 122 --------~g~d~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~~p~n 183 (398)
T 3ele_A 122 --------DAYDEFITIAPYFPEYKVFVNAAGA---RLVEVPADTE-HFQIDFDALEERINAH------TRGVIINSPNN 183 (398)
T ss_dssp --------STTCEEEEESSCCTHHHHHHHHTTC---EEEEECCCTT-TSSCCHHHHHHTCCTT------EEEEEECSSCT
T ss_pred --------CCCCEEEEeCCCchhhHHHHHHcCC---EEEEEecCCc-CCcCCHHHHHHHhCcC------CCEEEEcCCCC
Confidence 56 7888899999999999999999 9999999753 5799999999998643 34788889999
Q ss_pred cccccCC---hhHHHHHHHH------hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEe
Q 037144 245 AITAVDP---LKPLCDVAKQ------FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWV 314 (502)
Q Consensus 245 ~~G~idp---l~eI~~i~~~------~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~ 314 (502)
++|.+-| +++|+++|++ ||+++++|++|+.+......... .......+.++.++||+++ .+...|++++
T Consensus 184 ptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 262 (398)
T 3ele_A 184 PSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPF-VTKYYDNTLVCYSYSKSLSLPGERIGYVLV 262 (398)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCC-GGGTCSSEEEEEESTTTSSCTTTCCEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCC-hHhhcCCeEEEEehhhcCCCccceeEEEEE
Confidence 9999987 7777799999 99999999999875542211111 1112245577889999997 5567899887
Q ss_pred eCchh----hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q 037144 315 KDPSC----LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFE 390 (502)
Q Consensus 315 r~~~~----l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~ 390 (502)
++... +...+........ .-....+..+++...+... ...+++.++++++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~l~ 317 (398)
T 3ele_A 263 PDEVYDKAELYAAVCGAGRALG----------------------YVCAPSLFQKMIVKCQGAT---GDINAYKENRDLLY 317 (398)
T ss_dssp CTTSTTHHHHHHHHHHHHHHTT----------------------CCCSCHHHHHHHTTCTTCC---CCHHHHHHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHhhhcc----------------------ccCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHHH
Confidence 66521 1111100000000 0000122223322222111 13566778888899
Q ss_pred HHHhcCCCeEEecCCCeeE-EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC
Q 037144 391 RLVTSDKRFEVAFPRNFSL-VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG 469 (502)
Q Consensus 391 ~~l~~~~~~~l~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~ 469 (502)
+.|+++ ++++.. +..++ +++.++... ..++.+.+.++|..+.++..+.
T Consensus 318 ~~L~~~-g~~~~~-~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~gi~v~~g~~~~ 366 (398)
T 3ele_A 318 EGLTRI-GYHCFK-PDGAFYMFVKALEDD-----------------------------SNAFCEKAKEEDVLIVAADGFG 366 (398)
T ss_dssp HHHHHH-TCCEEC-CSBSSEEEEECSSSC-----------------------------HHHHHHHHHTTTEECEESGGGT
T ss_pred HHHHHc-CCeecC-CCeeEEEEEEcCCCC-----------------------------HHHHHHHHHHCCEEEeCccccC
Confidence 999887 787764 44454 445443211 2456677777787555444444
Q ss_pred CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 470 GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 470 g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
...++|++++ +++++|+++++.|.++.++
T Consensus 367 ~~~~iRis~~---~~~e~i~~~l~~l~~~l~~ 395 (398)
T 3ele_A 367 CPGWVRISYC---VDREMIKHSMPAFEKIYKK 395 (398)
T ss_dssp CTTEEEEECC---SCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEec---CCHHHHHHHHHHHHHHHHH
Confidence 4569999985 5788999999999988764
No 96
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.91 E-value=5.1e-23 Score=224.84 Aligned_cols=241 Identities=12% Similarity=0.067 Sum_probs=172.4
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR 199 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~ 199 (502)
+..+.+++++|.+. ..++++|+++||..++.+... +++.|+++...|.|+..++...|+
T Consensus 209 ~~ee~la~l~G~d~--------~i~~~~Gtt~a~~~~i~al~~-----------~GD~Vlv~~~~h~s~~~~~~~~G~-- 267 (755)
T 2vyc_A 209 ESEKYAARVFGADR--------SWSVVVGTSGSNRTIMQACMT-----------DNDVVVVDRNCHKSIEQGLMLTGA-- 267 (755)
T ss_dssp HHHHHHHHHHTCSE--------EEEESSHHHHHHHHHHHHHCC-----------TTCEEEEESSCCHHHHHHHHHHCC--
T ss_pred HHHHHHHHHhCCCc--------eEEECCcHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHHHHHHHcCC--
Confidence 45577899999864 357777778888877776543 678899999999999999999999
Q ss_pred CCEEEEecCCCC---Cccc-----CHHHHHHHHHHH--H--hcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144 200 KNIRAIKTTKSS---SYGL-----SAESVLSQINLD--V--EAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 200 ~~v~~v~~~~~~---~~~~-----d~~~Le~~i~~~--~--~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh 267 (502)
+++.++.+.+. .+.+ |+++|+++|++. + +.+.+|.+|+++.+ |++|.+.|+++|+++|++||+++|
T Consensus 268 -~~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~li 345 (755)
T 2vyc_A 268 -KPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLH 345 (755)
T ss_dssp -EEEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEE
T ss_pred -EEEEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEE
Confidence 99999886431 1246 999999999863 2 24556667888886 689999999999999999999999
Q ss_pred eecccccccccCccchhhhcCCCC--CCe------eEEccCCcCCCCCcceEEEeeCc--hhhhhhhcCCcccccCccCC
Q 037144 268 VDAAYAGSACICPEFRHFIDGVEC--VDS------FSFNPHKWLFTTLDCCCLWVKDP--SCLLSTLSTNPQYLKNEATD 337 (502)
Q Consensus 268 VDaA~g~~~~~~~~~~~~~~~~~~--aDs------i~~~~hK~l~~p~~~g~~~~r~~--~~l~~~~~~~~~yl~~~~~~ 337 (502)
||+||+++..+.+.++.. ..+.+ +|+ ++.++||++++|.++|++++++. ..-...+......+.
T Consensus 346 vDeA~~~~~~~~~~~~~~-~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~----- 419 (755)
T 2vyc_A 346 FDEAWYGYARFNPIYADH-YAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHA----- 419 (755)
T ss_dssp EECTTCTTGGGCGGGTTS-SSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHHTS-----
T ss_pred EECcCchhcccCcccCCc-chhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHHHhC-----
Confidence 999998765444432111 11124 787 99999999999988999998775 110001100000010
Q ss_pred CCCcccccCCCcccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC---------eEEecCC
Q 037144 338 QEPKEQEVGYKDWQITLCRR--FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR---------FEVAFPR 405 (502)
Q Consensus 338 ~~~~~~~~~~~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~---------~~l~~~~ 405 (502)
.+.+ ....++-.+++.+..+|..+++++..++++++++.|+++++ |+++.+.
T Consensus 420 ----------------s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~ 482 (755)
T 2vyc_A 420 ----------------TTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKE 482 (755)
T ss_dssp ----------------CSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCS
T ss_pred ----------------CCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCch
Confidence 0111 01234445666666665678899999999999999999887 8887643
No 97
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.91 E-value=9e-23 Score=208.97 Aligned_cols=333 Identities=14% Similarity=0.090 Sum_probs=217.1
Q ss_pred HHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 90 AGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
+..+.+.+...+... ...|...++..++++.+.+|+.+.+|.+... ....++|+||++|+..++.+...
T Consensus 52 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~----~~~v~~t~g~~~a~~~~~~~~~~------ 121 (412)
T 2x5d_A 52 PPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDP----ESEAIVTIGSKEGLAHLMLATLD------ 121 (412)
T ss_dssp CHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCT----TTSEEEESCHHHHHHHHHHHHCC------
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CcCEEEcCChHHHHHHHHHHhCC------
Confidence 345666666665433 3345555667899999999999988863210 01589999999999888776532
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|+++..+|.++..+++..|. +++.+|+++++++.+|+++|+++++++ +.+|+++.++|++|.
T Consensus 122 -----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~l~~p~nptG~ 187 (412)
T 2x5d_A 122 -----HGDTILVPNPSYPIHIYGAVIAGA---QVRSVPLVPGIDFFNELERAIRESIPK------PRMMILGFPSNPTAQ 187 (412)
T ss_dssp -----TTCEEEEEESCCHHHHHHHHHHTC---EEEEEECSTTSCHHHHHHHHHHTEESC------CSEEEEESSCTTTCC
T ss_pred -----CCCEEEEcCCCchhHHHHHHHcCC---EEEEeecCCccCCCCCHHHHHHhcccC------ceEEEECCCCCCCCC
Confidence 567888888999999999999999 999999986434568999999887532 336777889999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCC-CCcceEEEeeCchhhhh
Q 037144 249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSCLLS 322 (502)
Q Consensus 249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~l~~ 322 (502)
+-| +++|+++|++||+++++|++|+.+.+........ +.+....|.++.++||+++. ...+|+++++ +....
T Consensus 188 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~- 265 (412)
T 2x5d_A 188 CVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGN-PELVS- 265 (412)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEEC-HHHHH-
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcC-HHHHH-
Confidence 865 7889999999999999999998865422111111 11113567889999999974 4467888874 33322
Q ss_pred hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144 323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFE 400 (502)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~ 400 (502)
.+.....+... ....+..+++...+ +.+.++++.++..++++++.+.|++. +++
T Consensus 266 ~l~~~~~~~~~-----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 321 (412)
T 2x5d_A 266 ALARIKSYHDY-----------------------GTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA-GWM 321 (412)
T ss_dssp HHHHHHHHHCC-----------------------CCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH-TCC
T ss_pred HHHHHHhhhcc-----------------------CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCE
Confidence 22111000000 01223333333333 45678888899999999999999887 777
Q ss_pred EecCCCeeE-EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEEEEE
Q 037144 401 VAFPRNFSL-VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYVLRF 476 (502)
Q Consensus 401 l~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~ 476 (502)
+. ++..++ +++.++. .. .. ....++.++|.+ .|..+.++..+. +..++|+
T Consensus 322 ~~-~~~~g~~~~~~~~~-~~--------------------~~----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi 375 (412)
T 2x5d_A 322 VE-NPKASMYVWAKIPE-PY--------------------AH----LGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRF 375 (412)
T ss_dssp CC-CCSBSSEEEEECCT-TT--------------------GG----GCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEE
T ss_pred ec-CCCeeeEEEEEcCC-cc--------------------CC----CCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEE
Confidence 65 445453 4455532 10 00 002356666654 486544433332 2468999
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 477 AAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 477 ~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+++. ++++++++++.|.++.++
T Consensus 376 s~~~---~~~~l~~~l~~l~~~l~~ 397 (412)
T 2x5d_A 376 ALIE---NRDRLRQAVRGIKAMFRA 397 (412)
T ss_dssp ECCS---CHHHHHHHHHHHHHHHHH
T ss_pred EecC---CHHHHHHHHHHHHHHHHh
Confidence 9863 677999999999988764
No 98
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.91 E-value=4.6e-23 Score=208.06 Aligned_cols=321 Identities=15% Similarity=0.105 Sum_probs=209.8
Q ss_pred HHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC
Q 037144 93 VGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN 172 (502)
Q Consensus 93 ~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~ 172 (502)
+.+.+...+... .|...+...+++ +.+++++|.+ .+++++|||+|+..++.+++-.
T Consensus 21 ~~~~~~~~~~~~--~~~~~~~~~~l~----~~la~~~~~~---------~~~~~~~gt~a~~~~~~~~~~~--------- 76 (374)
T 3uwc_A 21 YLNDLREFIKTA--DFTLGAELEKFE----KRFAALHNAP---------HAIGVGTGTDALAMSFKMLNIG--------- 76 (374)
T ss_dssp HHHHHHHHHHHT--CCSSCHHHHHHH----HHHHHHTTCS---------EEEEESCHHHHHHHHHHHTTCC---------
T ss_pred HHHHHHHHHHcC--CcccChhHHHHH----HHHHHHhCCC---------cEEEeCCHHHHHHHHHHHcCCC---------
Confidence 555555554332 244455555555 4567777765 3789999999998777765211
Q ss_pred CCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCCh
Q 037144 173 ISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPL 252 (502)
Q Consensus 173 ~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl 252 (502)
+++.|+++..+|.++..+++..|+ +++.+|++. ++.+|+++|++++++++ .+|+ +++++|.+.|+
T Consensus 77 -~gd~v~~~~~~~~~~~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~~~~~~------~~v~---~~n~~G~~~~~ 141 (374)
T 3uwc_A 77 -AGDEVITCANTFIASVGAIVQAGA---TPVLVDSEN--GYVIDPEKIEAAITDKT------KAIM---PVHYTGNIADM 141 (374)
T ss_dssp -TTCEEEEESSSCHHHHHHHHHTTC---EEEEECBCT--TSSBCGGGTGGGCCTTE------EEEC---CBCGGGCCCCH
T ss_pred -CCCEEEECCCccHHHHHHHHHcCC---EEEEEecCC--CCCcCHHHHHHhCCCCc------eEEE---EeCCcCCcCCH
Confidence 577899999999999999999999 999999973 57999999999886532 3444 67899999999
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccC--CcCCCCCcceEEEeeCchhhhhhhcCCccc
Q 037144 253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPH--KWLFTTLDCCCLWVKDPSCLLSTLSTNPQY 330 (502)
Q Consensus 253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~h--K~l~~p~~~g~~~~r~~~~l~~~~~~~~~y 330 (502)
++|.++|++||+++|+|++|+.+......... ..+|.+++++| |+++.+...|+++.+++..........
T Consensus 142 ~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~-----~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~--- 213 (374)
T 3uwc_A 142 PALAKIAKKHNLHIVEDACQTILGRINDKFVG-----SWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYR--- 213 (374)
T ss_dssp HHHHHHHHHTTCEEEEECTTCTTCEETTEETT-----SSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHT---
T ss_pred HHHHHHHHHcCCEEEEeCCCccCceeCCeecc-----ccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHH---
Confidence 99999999999999999999865442211111 13699999987 999764446666666554322111100
Q ss_pred ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEecCCCe--
Q 037144 331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR-FEVAFPRNF-- 407 (502)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~-~~l~~~~~~-- 407 (502)
..... ..+. ....+.......+..++.....++++++.++..++++++.+.|+++++ +++...+..
T Consensus 214 -~~~~~------~~~~----~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 282 (374)
T 3uwc_A 214 -NHGLI------NRDV----CVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVY 282 (374)
T ss_dssp -BTTEE------ETTE----ESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEE
T ss_pred -hcCcc------ccCc----cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCc
Confidence 00000 0000 000111223334445555545677888999999999999999999987 887543321
Q ss_pred -eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee--e------E----------
Q 037144 408 -SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA--I------V---------- 468 (502)
Q Consensus 408 -~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~------~---------- 468 (502)
+.+.|...... ..++.+.|.++|....... . +
T Consensus 283 ~~~~~~~~~~~~-----------------------------~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~ 333 (374)
T 3uwc_A 283 HVFHIYVLRVKY-----------------------------RDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDF 333 (374)
T ss_dssp CCCSSEEEEETT-----------------------------HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSC
T ss_pred eeeEEEEEEcCC-----------------------------HHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCC
Confidence 11223222111 2456777777786432221 0 0
Q ss_pred -----CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 469 -----GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 469 -----~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.....+|+++. +.++++||+++++.|+++.++
T Consensus 334 ~~~~~~~~~~lrl~~~-~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 334 PMAEKHGEAVITLPAH-PYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp HHHHHHHHHEEEECCC-TTSCHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHhCEEEccCC-CCCCHHHHHHHHHHHHHHHHh
Confidence 01268999975 567788999999999998764
No 99
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.91 E-value=1.8e-22 Score=203.20 Aligned_cols=311 Identities=10% Similarity=0.071 Sum_probs=211.4
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+.. ...|..... . ++++++++++|.+.+ ..++|+||++++..++.+...
T Consensus 45 ~~~v~~a~~~~~~~-~~~y~~~~~-~----~lr~~la~~~~~~~~-------~v~~~~g~~~a~~~~~~~l~~------- 104 (365)
T 3get_A 45 PPKAIECLRQNANK-AHLYPDDSM-I----ELKSTLAQKYKVQNE-------NIIIGAGSDQVIEFAIHSKLN------- 104 (365)
T ss_dssp CHHHHHHHHHHGGG-TTSCCCTTC-H----HHHHHHHHHHTCCGG-------GEEEESSHHHHHHHHHHHHCC-------
T ss_pred CHHHHHHHHHHHHh-hccCCCCCh-H----HHHHHHHHHhCCCcc-------eEEECCCHHHHHHHHHHHHhC-------
Confidence 34455555555432 223332222 3 445667777887654 689999999999877766532
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|+++..+|.++...++..|. +++.+|++ ++++ +|+++|+++++++ +.+|+++.++|++|.+
T Consensus 105 ----~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~-~~~~-~d~~~l~~~l~~~------~~~v~~~~p~nptG~~ 169 (365)
T 3get_A 105 ----SKNAFLQAGVTFAMYEIYAKQCGA---KCYKTQSI-THNL-DEFKKLYETHKDE------IKLIFLCLPNNPLGEC 169 (365)
T ss_dssp ----TTCEEEECSSCCTHHHHHHHHHTC---EEEECSSS-SCCH-HHHHHHHHHTTTT------EEEEEEESSCTTTCCC
T ss_pred ----CCCEEEEeCCChHHHHHHHHHcCC---EEEEEecC-CCCC-CCHHHHHHHhCCC------CCEEEEcCCCCCCCCC
Confidence 567889999999999999999999 99999982 2368 9999999998743 3478888999999999
Q ss_pred CChhHHHHHHH--HhCCEEEeecccccccc--cCcc---chhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhh
Q 037144 250 DPLKPLCDVAK--QFGIWVHVDAAYAGSAC--ICPE---FRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLL 321 (502)
Q Consensus 250 dpl~eI~~i~~--~~g~~lhVDaA~g~~~~--~~~~---~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~ 321 (502)
-|+++|.++++ ++|+++++|++|+.+.+ .... ...... ....+.++.++||+++ .+...|+++. ++....
T Consensus 170 ~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~ 247 (365)
T 3get_A 170 LDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIK-EFDNVLYLGTFSKLYGLGGLRIGYGIA-NANIIS 247 (365)
T ss_dssp CCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHH-HCTTEEEEEESSSTTSCTTTCCEEEEE-CHHHHH
T ss_pred cCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhc-cCCCEEEEeecchHhcCcchheEEEEc-CHHHHH
Confidence 99999999988 77999999999986553 2111 111111 1145577889999997 4456788877 444332
Q ss_pred hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144 322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFE 400 (502)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~ 400 (502)
........| + ...+..+++...+ ..+++++..++..++++++.+.|+++ +++
T Consensus 248 ~~~~~~~~~--------------------~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 300 (365)
T 3get_A 248 AFYKLRAPF--------------------N------VSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-NIK 300 (365)
T ss_dssp HHHHHSCTT--------------------C------SCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred HHHHhcCCC--------------------C------cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCE
Confidence 211111000 0 1223333333333 24678889999999999999999998 888
Q ss_pred EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecC
Q 037144 401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGN 480 (502)
Q Consensus 401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~ 480 (502)
+. ++..+++.+.+.... ..++.+.|.++|..+.++..+. ..++|++++
T Consensus 301 ~~-~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~gi~v~~g~~~~-~~~iRis~~- 348 (365)
T 3get_A 301 II-DSYTNFITYFFDEKN-----------------------------STDLSEKLLKKGIIIRNLKSYG-LNAIRITIG- 348 (365)
T ss_dssp EC-CCSSSEEEEECSSSC-----------------------------HHHHHHHHHTTTEECEECGGGT-CSEEEEECC-
T ss_pred EC-CCCCeEEEEECCCCC-----------------------------HHHHHHHHHHCCEEEEECccCC-CCEEEEEcC-
Confidence 75 555566666554311 3466777777886544433333 679999975
Q ss_pred CCCcHHHHHHHHHHHHHHH
Q 037144 481 SMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 481 ~~t~~~di~~~~~~l~~~~ 499 (502)
+++++++++++|+++.
T Consensus 349 ---~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 349 ---TSYENEKFFTEFDKIL 364 (365)
T ss_dssp ---CHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHh
Confidence 5679999999998875
No 100
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.90 E-value=1.2e-22 Score=208.58 Aligned_cols=318 Identities=13% Similarity=0.044 Sum_probs=201.6
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
.++..++.+++++++|.+. .+++++||+|+..++.+.+-. +++.|+++..+|.++..+++.
T Consensus 41 ~~l~~~l~~~la~~~g~~~---------~i~~~~gt~al~~~~~~~~~~----------~gd~Vl~~~~~~~~~~~~~~~ 101 (418)
T 2c81_A 41 ESMERKFAKAFADFNGVPY---------CVPTTSGSTALMLALEALGIG----------EGDEVIVPSLTWIATATAVLN 101 (418)
T ss_dssp CCHHHHHHHHHHHHHTCSE---------EEEESCHHHHHHHHHHHTTCC----------TTCEEEEESSSCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCc---------EEEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCccHhHHHHHHH
Confidence 4455667788889888862 578888999998887765211 567889999999999999999
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144 195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 274 (502)
Q Consensus 195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~ 274 (502)
.|+ +++.+|++++ ++.+|+++|+++|+++ +.+|+++ +++|...|+++|.++|++||+++|+|++|+.
T Consensus 102 ~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~---~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~ 168 (418)
T 2c81_A 102 VNA---LPVFVDVEAD-TYCIDPQLIKSAITDK------TKAIIPV---HLFGSMANMDEINEIAQEHNLFVIEDCAQSH 168 (418)
T ss_dssp TTC---EEEEECBCTT-TCSBCHHHHGGGCCTT------EEEECCB---CCTTCCCCHHHHHHHHHHTTCEEEEECTTCT
T ss_pred cCC---EEEEEecCCC-CCCcCHHHHHHhhCCC------CeEEEEe---CCcCCcccHHHHHHHHHHCCCEEEEECcccc
Confidence 999 9999999752 5799999999988643 2355543 4789999999999999999999999999987
Q ss_pred ccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCc-----
Q 037144 275 SACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKD----- 349 (502)
Q Consensus 275 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~----- 349 (502)
+...... . +..+..++++++++||+++.+ .+|+++.+++..... +.....+....... +......+.+
T Consensus 169 ~~~~~~~--~-~~~~~~~~~~s~s~~K~~~~g-~~g~~~~~~~~l~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 241 (418)
T 2c81_A 169 GSVWNNQ--R-AGTIGDIGAFSCQQGKVLTAG-EGGIIVTKNPRLFEL-IQQLRADSRVYCDD--SSELMHGDMQLVKKG 241 (418)
T ss_dssp TCEETTE--E-TTSSSSEEEEECCTTSSSCSS-SCEEEEESCHHHHHH-HHHHHBTTEEECSC--GGGCCTTCBSEEECC
T ss_pred cCccCCE--e-cccccceEEEeccCCcccCCC-CeEEEEECCHHHHHH-HHHHHHhCcccccc--ccccccchhhccccc
Confidence 7532111 1 111223556666679999773 566666655543221 11000000000000 0000000100
Q ss_pred ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe------eEEEEEeecC---cch
Q 037144 350 WQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNF------SLVCFRVTPS---AVM 420 (502)
Q Consensus 350 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~------~~v~f~~~~~---~~~ 420 (502)
..+....+...+.. ++.....++++++.++..++++++.+.|+++|++++..++.. .++++.+... +.
T Consensus 242 ~~~g~~~~~~~~~a--a~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 318 (418)
T 2c81_A 242 DIQGSNYCLSEFQS--AILLDQLQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVKFGGL- 318 (418)
T ss_dssp SSCCCBCCCCHHHH--HHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGGTTTC-
T ss_pred cccCcCCCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEcccccccc-
Confidence 00011112222322 222223456788888999999999999999999998744432 2455665420 10
Q ss_pred hhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcE---EEEeee-E------C--------------------
Q 037144 421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKV---FMTHAI-V------G-------------------- 469 (502)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~---~~~~~~-~------~-------------------- 469 (502)
...++.+.|.++ |.. .-.+.. . .
T Consensus 319 --------------------------~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (418)
T 2c81_A 319 --------------------------NADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRG 372 (418)
T ss_dssp --------------------------CHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHT
T ss_pred --------------------------CHHHHHHHHHHcCCCCcccccccccccccCchhccccccccccccccccccccc
Confidence 024567777777 765 322110 0 0
Q ss_pred C---------EEEEEEEecCCCC-cHHHHHHHHHHHHHHHHh
Q 037144 470 G---------IYVLRFAAGNSMT-MESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 470 g---------~~~lR~~~~~~~t-~~~di~~~~~~l~~~~~~ 501 (502)
+ ...||+++. +.+ +++||++++++|+++.++
T Consensus 373 ~~~~~~~~~~~~~lrl~~~-~~~gt~edi~~~~~~l~~~~~~ 413 (418)
T 2c81_A 373 LHYPVSERASGQSIVIHHA-ILLAEPSHLSLLVDAVAELARK 413 (418)
T ss_dssp CCCHHHHHHHHHEEEEEGG-GGGSCHHHHHHHHHHHHHHHHT
T ss_pred CCChHHHHHHhCEEEecCC-ccCCCHHHHHHHHHHHHHHHHh
Confidence 1 258999985 556 788999999999998765
No 101
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.90 E-value=4.8e-23 Score=210.07 Aligned_cols=344 Identities=12% Similarity=-0.009 Sum_probs=213.7
Q ss_pred CcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHHHHH
Q 037144 77 PNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEALLC 155 (502)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~ 155 (502)
|..+.+.+++..+|..+.+.+....+........+|...++.+++++++++++|++... .+++ |+|||+|+..
T Consensus 39 ~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~------~i~~~t~g~t~al~~ 112 (398)
T 2fyf_A 39 PRDGRFGSGPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGY------EVILGNGGATAFWDA 112 (398)
T ss_dssp CSSCBCCSSSCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTC------EEEEEETCHHHHHHH
T ss_pred cCCccccCCCCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEeCCchhHHHHH
Confidence 33344445544444445555444221211111235666777888999999999997422 5787 9999999988
Q ss_pred HHHHHHHHHHHHhCccCCCCeEEEeCCCCchh-HHHHHHHc--CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCC
Q 037144 156 TLTAARDRVLKKIGRENISKLVVYSSDQTHCA-FQKAAQIV--GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAEL 232 (502)
Q Consensus 156 al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~aa~~~--Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~ 232 (502)
++.+... ++ +++++...|.. +...+... |. +++.||++. + ..++. + +++
T Consensus 113 ~~~~l~~-----------~g-v~~v~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~-g-~~~~~-~----i~~------ 164 (398)
T 2fyf_A 113 AAFGLID-----------KR-SLHLTYGEFSAKFASAVSKNPFVG---EPIIITSDP-G-SAPEP-Q----TDP------ 164 (398)
T ss_dssp HHHHTCS-----------SC-EEEEECSHHHHHHHHHHHHCTTSC---CCEEEECCT-T-CCCCC-C----CCT------
T ss_pred HHHHhcC-----------CC-eEEEeCCHHHHHHHHHHHHhCCCC---ceEEEecCC-C-CCCCc-c----ccC------
Confidence 7776532 34 23334444532 33345666 66 888999873 2 23332 1 221
Q ss_pred ccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEE
Q 037144 233 IPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCL 312 (502)
Q Consensus 233 ~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~ 312 (502)
++.+|+++.++|++|.+.|+++|.++ +|+|+|+|+||+.+....+ +..+|+++.++||+++.|.++|++
T Consensus 165 ~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~--------~~~~di~~~s~sK~~~~~gg~g~l 233 (398)
T 2fyf_A 165 SVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVD--------IAETDAYYFAPQKNFASDGGLWLA 233 (398)
T ss_dssp TCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCC--------GGGCSEEEECTTSTTCSCSSEEEE
T ss_pred CCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccC--------cccCcEEEEecCcccCCCCceEEE
Confidence 24578888999999999999999987 8999999999987654322 125899999999999888678888
Q ss_pred EeeCchhhhhhhc------CCcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHHH-HHHHHHHHHH
Q 037144 313 WVKDPSCLLSTLS------TNPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVAN-LRNFIRSHVG 384 (502)
Q Consensus 313 ~~r~~~~l~~~~~------~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g-~~~~~~~~~~ 384 (502)
++++. .+..... ..+.|+...... .... ..... .+.. ....++..+++.+..+| ++++.++..+
T Consensus 234 ~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~-~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~ 305 (398)
T 2fyf_A 234 IMSPA-ALSRIEAIAATGRWVPDFLSLPIAV-----ENSL-KNQTY-NTPAIATLALLAEQIDWLVGNGGLDWAVKRTAD 305 (398)
T ss_dssp EECHH-HHHHHHHHHHTTCCCCGGGCHHHHH-----HHHT-TTCCS-SCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred EECHH-HHHHhhcccccCCCCCcEEehHHHh-----hhcc-cCCCC-CCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 87654 2221110 012233211000 0000 00000 0101 11234556666655565 8899999999
Q ss_pred HHHHHHHHHhcCCCeEEec-CC--Cee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCc
Q 037144 385 MAKLFERLVTSDKRFEVAF-PR--NFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGK 460 (502)
Q Consensus 385 la~~l~~~l~~~~~~~l~~-~~--~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 460 (502)
+++++.+.|+++|++++.. .+ ..+ +++|++++ +. + ..++.++|.++|.
T Consensus 306 ~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~-------------------------~--~~~l~~~L~~~gI 357 (398)
T 2fyf_A 306 SSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVD-DV-------------------------D--AGTVAKILRANGI 357 (398)
T ss_dssp HHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECT-TS-------------------------C--HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCC-CC-------------------------C--HHHHHHHHHHCCc
Confidence 9999999999998999874 23 356 77787742 11 0 2467777777787
Q ss_pred EEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144 461 VFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF 502 (502)
Q Consensus 461 ~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~ 502 (502)
.+.++....+..++|++++. .++++|+++++++|+++.+++
T Consensus 358 ~v~~g~~~~~~~~iRis~~~-~~t~e~i~~~~~~l~~~l~~~ 398 (398)
T 2fyf_A 358 VDTEPYRKLGRNQLRVAMFP-AVEPDDVSALTECVDWVVERL 398 (398)
T ss_dssp BCCSCCTTTCSSEEEEECCT-TSCHHHHHHHHHHHHHHHHTC
T ss_pred EEecCcccCCCCEEEEEecC-CCCHHHHHHHHHHHHHHHHhC
Confidence 54332111234689999874 467789999999999987653
No 102
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.90 E-value=7.3e-24 Score=214.14 Aligned_cols=323 Identities=14% Similarity=0.070 Sum_probs=206.5
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+... .|..++...++|+. +++++|.+ .+++++|||+|+..++.++.-.
T Consensus 16 ~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~----la~~~~~~---------~~i~~~sgt~al~~~l~~l~~~------ 74 (373)
T 3frk_A 16 EYEIKFKFEEIYKRN--WFILGDEDKKFEQE----FADYCNVN---------YCIGCGNGLDALHLILKGYDIG------ 74 (373)
T ss_dssp HHHHHHHHHHHHHHT--CCSSSHHHHHHHHH----HHHHHTSS---------EEEEESCHHHHHHHHHHHTTCC------
T ss_pred CHHHHHHHHHHHHCC--CccCCchHHHHHHH----HHHHhCCC---------eEEEeCCHHHHHHHHHHHcCCC------
Confidence 333444444444332 24455666666655 55666664 3799999999998887765211
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|+++..+|.++..+++..|+ +++.++++++ ++.+|+++|+++|++++ .+|+ +++++|.+
T Consensus 75 ----~gd~Vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~l~~~~------~~v~---~~n~~G~~ 137 (373)
T 3frk_A 75 ----FGDEVIVPSNTFIATALAVSYTGA---KPIFVEPDIR-TYNIDPSLIESAITEKT------KAII---AVHLYGQP 137 (373)
T ss_dssp ----TTCEEEEETTSCTHHHHHHHHHSC---EEEEECEETT-TTEECGGGTGGGCCTTE------EEEE---EECCTTCC
T ss_pred ----CcCEEEECCCCcHHHHHHHHHcCC---EEEEEecccc-ccCcCHHHHHHhcCCCC------eEEE---EECCCcCc
Confidence 577899999999999999999999 9999999853 57999999999886533 3555 56689999
Q ss_pred CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEc--cCCcCCCCCcceEEEeeCchhhhhhhcCC
Q 037144 250 DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFN--PHKWLFTTLDCCCLWVKDPSCLLSTLSTN 327 (502)
Q Consensus 250 dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~--~hK~l~~p~~~g~~~~r~~~~l~~~~~~~ 327 (502)
.|+++|.++|++||+++|+|+||+.+...... .. + ...|.++++ .||+++.+...|+++.+++..... +..
T Consensus 138 ~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~--~~--~-~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~-~~~- 210 (373)
T 3frk_A 138 ADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGM--KV--G-SLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEK-IKA- 210 (373)
T ss_dssp CCHHHHHHHHHHHTCEEEEECTTCTTCEETTE--ET--T-SSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHH-HHH-
T ss_pred ccHHHHHHHHHHcCCEEEEECCcccCCEECCE--ec--c-ccccEEEEeCcCCCccCccceeEEEEeCCHHHHHH-HHH-
Confidence 99999999999999999999999865542211 11 0 136777777 669997634456666655533221 110
Q ss_pred cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC-
Q 037144 328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN- 406 (502)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~- 406 (502)
+...... .. +. ....+..+....+.+++.....++++++.++..++++++.+.|++++ +++...+.
T Consensus 211 ---~~~~g~~-----~~--~~--~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~ 277 (373)
T 3frk_A 211 ---LSNYGSE-----KK--YH--HIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADY 277 (373)
T ss_dssp ---HHBTTCS-----BT--TB--CCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTT
T ss_pred ---HHhcCcc-----cC--Cc--cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCC
Confidence 0000000 00 00 00011122333444555555567788889999999999999999986 77643221
Q ss_pred --eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee---eE-----------C-
Q 037144 407 --FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA---IV-----------G- 469 (502)
Q Consensus 407 --~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~~-----------~- 469 (502)
.+.+.|.+.... ...+.+.|.++|...-... .. .
T Consensus 278 ~~~~~~~~~~~~~~-----------------------------~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~ 328 (373)
T 3frk_A 278 AKHVWYTFVIRSEK-----------------------------RDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTG 328 (373)
T ss_dssp EECCCSSEEEEESS-----------------------------HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTT
T ss_pred CceeeEEEEEEeCC-----------------------------HHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCC
Confidence 112223322211 2456777777786432111 00 0
Q ss_pred --------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 470 --------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 470 --------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
....+|+++. +.++++||++++++|++...
T Consensus 329 ~~~~~~~~~~~~lrl~~~-~~~t~~di~~~~~~l~~~~~ 366 (373)
T 3frk_A 329 NFPIAEKIANEILSIPIW-YGMKNEEIEYVIDKINAWKL 366 (373)
T ss_dssp SSHHHHHHHHHEEEECCC-TTCCHHHHHHHHHHHHTCC-
T ss_pred CCHHHHHHHhCEEEccCC-CCCCHHHHHHHHHHHHHHhh
Confidence 0168999975 66788899999999987654
No 103
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.90 E-value=1.8e-23 Score=212.55 Aligned_cols=309 Identities=13% Similarity=0.106 Sum_probs=202.8
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
.++...++++. +++++|.+ .+++++|||+|+..++.++.-. +++.|+++..+|.++.
T Consensus 54 ~~~~~~~l~~~----la~~~~~~---------~~i~~~~gt~al~~~l~~~~~~----------~gd~vl~~~~~~~~~~ 110 (391)
T 3dr4_A 54 VGRFIVEFEKA----FADYCGVK---------HAIACNNGTTALHLALVAMGIG----------PGDEVIVPSLTYIASA 110 (391)
T ss_dssp CSHHHHHHHHH----HHHHHTCS---------EEEEESSHHHHHHHHHHHHTCC----------TTCEEEEESSSCTHHH
T ss_pred CChHHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCchHHHH
Confidence 34555555555 56666665 3789999999998888766211 5778999999999999
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEee
Q 037144 190 KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVD 269 (502)
Q Consensus 190 ~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVD 269 (502)
.+++..|+ +++.++++++ ++.+|+++|++++++++ .+|+ .++++|.+.|+++|+++|++||+++++|
T Consensus 111 ~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~------~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D 177 (391)
T 3dr4_A 111 NSVTYCGA---TPVLVDNDPR-TFNLDAAKLEALITPRT------KAIM---PVHLYGQICDMDPILEVARRHNLLVIED 177 (391)
T ss_dssp HHHHHTTC---EEEEECBCTT-TCSBCGGGSGGGCCTTE------EEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHCCC---EEEEEecCcc-ccCcCHHHHHHhcCCCc------eEEE---EECCCCChhhHHHHHHHHHHcCCEEEEE
Confidence 99999999 9999999853 57999999999886432 3444 3568999999999999999999999999
Q ss_pred cccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCc
Q 037144 270 AAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKD 349 (502)
Q Consensus 270 aA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 349 (502)
+||+.+....+.... .+..+++++++.||+++++ ..|+++.+++.... .+.....+-... ....
T Consensus 178 ~a~~~g~~~~~~~~~---~~~di~~~S~s~~K~l~~g-~gg~~~~~~~~~~~-~~~~~~~~g~~~-------~~~~---- 241 (391)
T 3dr4_A 178 AAEAVGATYRGKKSG---SLGDCATFSFFGNAIITTG-EGGMITTNDDDLAA-KMRLLRGQGMDP-------NRRY---- 241 (391)
T ss_dssp CTTCTTCEETTEETT---SSSSEEEEECBTTSSSCCB-SCEEEEESCHHHHH-HHHHHHBTTCCT-------TSTT----
T ss_pred CcccccceECCeeec---ccCCEEEEECCCCCcCCcC-CeEEEEECCHHHHH-HHHHHHhcCCCC-------CCcc----
Confidence 999865544332111 1123455666688999763 45666665553322 111000000000 0000
Q ss_pred ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--C-----CeeEEEEEeecC-cchh
Q 037144 350 WQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP--R-----NFSLVCFRVTPS-AVMD 421 (502)
Q Consensus 350 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~--~-----~~~~v~f~~~~~-~~~~ 421 (502)
+....+..+....+.+++.....++++++.++..++++++.+.|+++ ++++..+ + ...++.+.+... +.
T Consensus 242 ~~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-- 318 (391)
T 3dr4_A 242 WFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHVFWMYTVRLGEGLST-- 318 (391)
T ss_dssp CCSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCCSSEEEEECSSCSS--
T ss_pred cccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcceeEEEEEEECCccch--
Confidence 01111222344455555555556778889999999999999999998 8887654 2 122345555431 10
Q ss_pred hhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee-------E-------------CCEEEEEEEecCC
Q 037144 422 KLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI-------V-------------GGIYVLRFAAGNS 481 (502)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-------~-------------~g~~~lR~~~~~~ 481 (502)
...++.+.|.++|..+..+.. + .....+|+++. +
T Consensus 319 -------------------------~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~-~ 372 (391)
T 3dr4_A 319 -------------------------TRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTH-A 372 (391)
T ss_dssp -------------------------CHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCC-T
T ss_pred -------------------------hHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCC-C
Confidence 024677778788875432210 0 01358999874 6
Q ss_pred CCcHHHHHHHHHHHHHHH
Q 037144 482 MTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 482 ~t~~~di~~~~~~l~~~~ 499 (502)
.++++||++++++|+++.
T Consensus 373 ~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 373 GLTEADIDRVIAALDQVL 390 (391)
T ss_dssp TCCHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHh
Confidence 677889999999998753
No 104
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.90 E-value=5e-24 Score=220.53 Aligned_cols=290 Identities=10% Similarity=0.003 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G 196 (502)
...++.+++++ +|.+. ..++|+|+|+||..++.++.. +++.|+++..+|.++..++...|
T Consensus 58 ~~~~~~~~la~-~g~~~--------~v~~~~G~t~a~~~~~~a~~~-----------~gd~Vlv~~~~h~s~~~~~~~~G 117 (446)
T 2x3l_A 58 VILKSMKQVEK-HSDYD--------GYFLVNGTTSGILSVIQSFSQ-----------KKGDILMARNVHKSVLHALDISQ 117 (446)
T ss_dssp HHHHHHHHHCS-CTTEE--------EEEESSHHHHHHHHHHHTTTT-----------SSSCEEECTTCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHh-cCCCc--------eEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEecCccHHHHHHHHHcC
Confidence 45667788999 99863 478999999999888877643 67789999999999999999999
Q ss_pred CCCCCEEEEecCCCCC----cccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 197 IDRKNIRAIKTTKSSS----YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 197 lg~~~v~~v~~~~~~~----~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
+ +++.++...+++ +.+|+++| +.++ +.+|+++. +|++|.+.|+++|+++|++||+|+|+|+||
T Consensus 118 ~---~~~~v~~~~~~~~~~~~~~d~~~l---~~~~------~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~ 184 (446)
T 2x3l_A 118 Q---EGHFIETHQSPLTNHYNKVNLSRL---NNDG------HKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAH 184 (446)
T ss_dssp C---CEEECEEEECTTTSSEEEEEC----------------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTT
T ss_pred C---eEEEEeCeeccccCcCCCCCHHHH---cCCC------ceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchh
Confidence 9 999999822122 57898887 3322 33677777 566999999999999999999999999999
Q ss_pred ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc
Q 037144 273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI 352 (502)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~ 352 (502)
++...+.+...... . .++|+++.++||+++++.++|++++++...-...+.........
T Consensus 185 ~~~~~f~~~~~~~~-~-~g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~~~~~~------------------- 243 (446)
T 2x3l_A 185 GAHFGLQGFPDSTL-N-YQADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYLSYFQT------------------- 243 (446)
T ss_dssp CTTTTSTTSCCCGG-G-GTCSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHHHHHSC-------------------
T ss_pred hhhhccCCCCCChH-H-cCCCEEEECCccccccccccEEEEEcCCcCCHHHHHHHHHHHcC-------------------
Confidence 87322222100111 1 15899999999999988899999997653210111000000000
Q ss_pred cCCCCCC-chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCC
Q 037144 353 TLCRRFR-SLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGT 431 (502)
Q Consensus 353 ~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~ 431 (502)
++.... ...+..+++.+...+.+++.++..++++++++. +++++.+.....+++.+.+..
T Consensus 244 -~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~-----g~~~~~~~~~~~l~i~~~~~~------------- 304 (446)
T 2x3l_A 244 -SSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK-----GFEMLQVDDPLKLLIKYEGFT------------- 304 (446)
T ss_dssp -SSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-----TCEEEECSSTTEEEEECTTSC-------------
T ss_pred -CCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-----CCEECcCCCCeEEEEEeCCcC-------------
Confidence 111111 123444555554445555778888888888776 688775432234555553211
Q ss_pred cccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 432 YDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..++.+.|.++|..+ .. .+..++|++++. .++++++ +++++|+++.+.
T Consensus 305 ----------------~~~l~~~L~~~GI~v-~~---~g~~~iRi~~~~-~~t~e~i-~l~~aL~~~~~~ 352 (446)
T 2x3l_A 305 ----------------GHDIQNWFMNAHIYL-EL---ADDYQALAILPL-WHHDDTY-LFDSLLRKIEDM 352 (446)
T ss_dssp ----------------HHHHHHHHHHTTEEE-SE---ECSSCEEEECCC-CCTTCCC-CHHHHHHHHHTC
T ss_pred ----------------HHHHHHHHHHCCCEE-Ee---cCCCEEEEEeec-CCCHHHH-HHHHHHHHHHHh
Confidence 235667777777543 21 134689999864 4566689 999999988654
No 105
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.90 E-value=1.7e-22 Score=205.92 Aligned_cols=321 Identities=14% Similarity=0.091 Sum_probs=210.2
Q ss_pred HHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144 90 AGIVGEMLSSGFNVV---GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK 166 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~ 166 (502)
+..+.+.+...+... ...|...++..++++.+.+|+ |.+.+ ..++|+|+++++..++.+...
T Consensus 49 ~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~----g~~~~-------~v~~~~g~~~al~~~~~~~~~---- 113 (397)
T 2zyj_A 49 KEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWI----GVRPE-------EVLITTGSQQALDLVGKVFLD---- 113 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHH----TSCGG-------GEEEESHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHh----CCChh-------hEEEeccHHHHHHHHHHHhCC----
Confidence 445555555544321 124444445667777666555 66543 589999999999877776532
Q ss_pred HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHH-HHhcCCccEEE-EEecCCc
Q 037144 167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINL-DVEAELIPLFL-CATVGTT 244 (502)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~-~~~~g~~p~~V-v~t~gtt 244 (502)
+++.|++...+|.++...++..|. +++.+|.++ + .+|+++|++++++ ++ .+| +.+.++|
T Consensus 114 -------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~--~-~~d~~~l~~~l~~~~~------~~v~~~~~~~n 174 (397)
T 2zyj_A 114 -------EGSPVLLEAPSYMGAIQAFRLQGP---RFLTVPAGE--E-GPDLDALEEVLKRERP------RFLYLIPSFQN 174 (397)
T ss_dssp -------TTCEEEEEESCCHHHHHHHHTTCC---EEEEEEEET--T-EECHHHHHHHHHHCCC------SCEEECCBSCT
T ss_pred -------CCCEEEEeCCCcHHHHHHHHHcCC---EEEecCcCC--C-CCCHHHHHHHHhhcCC------eEEEECCCCcC
Confidence 567788888899999999999999 999999875 2 3999999999976 22 244 5678899
Q ss_pred cccccCChh---HHHHHHHHhCCEEEeecccccccccCc---cchhhhcCCC---CCCeeEEccCCcCCCCCcceEEEee
Q 037144 245 AITAVDPLK---PLCDVAKQFGIWVHVDAAYAGSACICP---EFRHFIDGVE---CVDSFSFNPHKWLFTTLDCCCLWVK 315 (502)
Q Consensus 245 ~~G~idpl~---eI~~i~~~~g~~lhVDaA~g~~~~~~~---~~~~~~~~~~---~aDsi~~~~hK~l~~p~~~g~~~~r 315 (502)
++|.+-|.+ +|+++|++||+++++|++|+.+..... ..... . .. .-..++.++||+++....+|+++++
T Consensus 175 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~-~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~ 252 (397)
T 2zyj_A 175 PTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFEL-A-REAGYPGVIYLGSFSKVLSPGLRVAFAVAH 252 (397)
T ss_dssp TTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHH-H-HHHTCCCEEEEEESTTTTCGGGCCEEEECC
T ss_pred CCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhh-C-cccCCCeEEEEecccccccccceeEEEecC
Confidence 999997754 899999999999999999987654221 11111 0 01 1226678899999833567888876
Q ss_pred CchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cH-HHHHHHHHHHHHHHHHHHHH
Q 037144 316 DPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GV-ANLRNFIRSHVGMAKLFERL 392 (502)
Q Consensus 316 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~-~g~~~~~~~~~~la~~l~~~ 392 (502)
+... +.+....... +. ++ ..+..+++...+ +. +.++++.+++.++++++.+.
T Consensus 253 -~~~~-~~l~~~~~~~-------------------~~-~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 307 (397)
T 2zyj_A 253 -PEAL-QKLVQAKQGA-------------------DL-HT---PMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHA 307 (397)
T ss_dssp -HHHH-HHHHHHHHHH-------------------HS-SC---CHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHH-HHHHHHHHhh-------------------cC-CC---CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3322 2221100000 00 00 223333333333 22 45777888888999999999
Q ss_pred Hhc-CC-CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-
Q 037144 393 VTS-DK-RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG- 469 (502)
Q Consensus 393 l~~-~~-~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~- 469 (502)
|++ .| ++++..+....++++.+... . + ..++.+++.++|..+.++..+.
T Consensus 308 L~~~~~~g~~~~~~~~g~~~~~~~~~~-~-------------------------~--~~~~~~~l~~~gi~v~~g~~f~~ 359 (397)
T 2zyj_A 308 LDREVPKEVRYTRPKGGMFVWMELPKG-L-------------------------S--AEGLFRRALEENVAFVPGGPFFA 359 (397)
T ss_dssp HHHHSCTTSEECCCSBSSEEEEECSTT-C-------------------------C--HHHHHHHHHHTTEEEEESGGGCT
T ss_pred HHHHCCCCeEEccCCccEEEEEEcCCC-C-------------------------C--HHHHHHHHHHCCCEEechHHhcC
Confidence 987 57 68876544445566665321 0 0 2467777778886554433331
Q ss_pred ---CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 470 ---GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 470 ---g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+..++|++++.. ++++|+++++.|.++.++
T Consensus 360 ~~~~~~~iRis~~~~--~~~~i~~~~~~l~~~l~~ 392 (397)
T 2zyj_A 360 NGGGENTLRLSYATL--DREGIAEGVRRLGRALKG 392 (397)
T ss_dssp TSCCTTEEEEECSSS--CHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCeEEEEcCCC--CHHHHHHHHHHHHHHHHH
Confidence 356899998753 678999999999887654
No 106
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.90 E-value=2.6e-22 Score=203.44 Aligned_cols=292 Identities=11% Similarity=0.032 Sum_probs=197.1
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
....++++.+++++|.+. .+++++||+++..++.+... ++++|+++...|.++..+++..
T Consensus 84 ~~~~~l~~~la~~~g~~~---------~i~~~sGt~a~~~~~~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~ 143 (384)
T 1bs0_A 84 VVHQALEEELAEWLGYSR---------ALLFISGFAANQAVIAAMMA-----------KEDRIAADRLSHASLLEAASLS 143 (384)
T ss_dssp HHHHHHHHHHHHHHTCSE---------EEEESCHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCCCc---------EEEeCCcHHHHHHHHHHhCC-----------CCcEEEEcccccHHHHHHHHHc
Confidence 344556677777788752 46667779999887765432 5678889999999999999999
Q ss_pred CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccc
Q 037144 196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS 275 (502)
Q Consensus 196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~ 275 (502)
|. +++.+|. +|+++|+++|++... .+.+|+++.++|++|.+.|+++|.++|++||+++++|++|+.+
T Consensus 144 g~---~~~~~~~-------~d~~~l~~~l~~~~~---~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~ 210 (384)
T 1bs0_A 144 PS---QLRRFAH-------NDVTHLARLLASPCP---GQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTG 210 (384)
T ss_dssp SS---EEEEECT-------TCHHHHHHHHHSCCS---SCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred CC---CEEEeCC-------CCHHHHHHHHHhcCC---CCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccc
Confidence 98 8888873 488999999875321 2457888889999999999999999999999999999999765
Q ss_pred ccc-C-ccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144 276 ACI-C-PEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT 353 (502)
Q Consensus 276 ~~~-~-~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 353 (502)
.+. . ......+ + ...|+++.++||+++ |.| |+++++ +............|....
T Consensus 211 ~~~~~~~~~~~~~-~-~~~di~~~s~sK~~~-~~G-G~~~~~-~~~~~~l~~~~~~~~~~~------------------- 266 (384)
T 1bs0_A 211 VIGEQGRGSCWLQ-K-VKPELLVVTFGKGFG-VSG-AAVLCS-STVADYLLQFARHLIYST------------------- 266 (384)
T ss_dssp TSSGGGCCHHHHT-T-CCCSEEEEESSSTTS-SCC-EEEEEC-HHHHHHHHHHCHHHHSSB-------------------
T ss_pred eecCCCCchHHhc-C-CCCcEEEeeccchhh-ccC-cEEEeC-HHHHHHHHHhchhhhcCC-------------------
Confidence 432 0 1111111 1 257899999999998 444 777774 433322111111121110
Q ss_pred CCCCCCch---HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCC
Q 037144 354 LCRRFRSL---KLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNG 430 (502)
Q Consensus 354 ~sr~~~al---~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 430 (502)
....+ .+..+++.+...+.+++.++..++++++.+.|+++ ++++. ++..+++++.+..
T Consensus 267 ---~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~-------------- 327 (384)
T 1bs0_A 267 ---SMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFTLA-DSCSAIQPLIVGD-------------- 327 (384)
T ss_dssp ---CCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEEC-SCCSSBCCEEEES--------------
T ss_pred ---CCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCccc-CCCCCEEEEEeCC--------------
Confidence 11222 23334444321155788889999999999999988 78876 4555666666632
Q ss_pred CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE---CCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV---GGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
.....++.+.|.++|..+.....+ .+..++|++++ ..++++++++++++|+++
T Consensus 328 --------------~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~-~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 328 --------------NSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLT-AAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp --------------HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCC-TTCCHHHHHHHHHHHHHH
T ss_pred --------------HHHHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEc-CCCCHHHHHHHHHHHHhh
Confidence 112346777777777643332211 23578999986 445777999999999875
No 107
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.90 E-value=1.4e-22 Score=207.04 Aligned_cols=327 Identities=9% Similarity=0.001 Sum_probs=218.6
Q ss_pred HHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 91 GIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 91 ~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
..+.+.+...+... ...|...++..++++.+.+|+.+.+|.+.+. ....++|+|+++++..++.+...
T Consensus 63 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~v~~t~G~~~al~~~~~~l~~------- 131 (404)
T 2o1b_A 63 QGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDK----EDEVCILYGTKNGLVAVPTCVIN------- 131 (404)
T ss_dssp HHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCT----TTSEEEESSHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----cccEEEcCCcHHHHHHHHHHhcC-------
Confidence 34556666555332 2235444567889999999999999975210 01589999999999887776532
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|+++..+|.++..+++..|. +++.+|+++ +++.+|+++|++++++++ .+|+++.++|++|.+
T Consensus 132 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~-~~~~~d~~~l~~~l~~~~------~~v~l~~p~nptG~~ 197 (404)
T 2o1b_A 132 ----PGDYVLLPDPGYTDYLAGVLLADG---KPVPLNLEP-PHYLPDWSKVDSQIIDKT------KLIYLTYPNNPTGST 197 (404)
T ss_dssp ----TTCEEEEEESCCSSHHHHHHHTTC---EEEEEECCT-TTCCCCGGGSCHHHHHHE------EEEEECSSCTTTCCC
T ss_pred ----CCCEEEEcCCCchhHHHHHHHCCC---EEEEeccCc-ccCcCCHHHHHHhhccCc------eEEEEcCCCCCCCcc
Confidence 567788888899999999999999 999999976 346789999999997543 377778899999999
Q ss_pred CC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhc--CCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhh
Q 037144 250 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID--GVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLST 323 (502)
Q Consensus 250 dp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~--~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~ 323 (502)
-| +++|+++|++||+++++|++|+.+.+.. ....... +....|.++.++||+++.| ..+|+++.+ +.... .
T Consensus 198 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~-~ 274 (404)
T 2o1b_A 198 ATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGN-KDMIQ-A 274 (404)
T ss_dssp CCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEEC-HHHHH-H
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccCchhheEeEecC-HHHHH-H
Confidence 65 7889999999999999999998764321 1111111 0113467888999999744 457887764 33322 2
Q ss_pred hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
+.....+... ....+..+++...+ +.+.+++..++..++++++.+.|++. ++++
T Consensus 275 l~~~~~~~~~-----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 330 (404)
T 2o1b_A 275 LKKYQTHTNA-----------------------GMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA-DLPF 330 (404)
T ss_dssp HHHHHHHHCC-----------------------CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCE
T ss_pred HHHHHhhccC-----------------------CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCee
Confidence 2111000000 00223333333333 35678888888999999999999988 7887
Q ss_pred ecCCCeeE-EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEEE
Q 037144 402 AFPRNFSL-VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRFA 477 (502)
Q Consensus 402 ~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~ 477 (502)
. ++..++ +++.++. .. + ..++.+++. +.|..+.++..+. +..++|++
T Consensus 331 ~-~~~~g~~~~~~~~~-~~-------------------------~--~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis 381 (404)
T 2o1b_A 331 V-HAKGGIYVWLETPP-GY-------------------------D--SEQFEQFLVQEKSILVAPGKPFGENGNRYVRIS 381 (404)
T ss_dssp E-CCCBSSEEEEECCT-TC-------------------------C--HHHHHHHHHHHHCEECEESGGGCGGGTTEEEEE
T ss_pred c-CCCcceEEEEeCCC-CC-------------------------C--HHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEE
Confidence 6 444454 4455532 11 0 234566655 3576544433232 24689999
Q ss_pred ecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 478 AGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 478 ~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
++. ++++|+++++.|.+++++
T Consensus 382 ~~~---~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 382 LAL---DDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp CCS---CTTHHHHHHHHHHGGGGG
T ss_pred EcC---CHHHHHHHHHHHHHHHHh
Confidence 874 456999999999988765
No 108
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.90 E-value=5.2e-22 Score=202.45 Aligned_cols=299 Identities=13% Similarity=0.100 Sum_probs=198.4
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCC
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGI 197 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Gl 197 (502)
..++.+.+++++|.+. ..++++ |+.+++.++.+.... .++++|+++...|.++..+++..|.
T Consensus 93 ~~~l~~~la~~~~~~~--------~i~~~s-G~~a~~~~~~~l~~~---------~~gd~Vl~~~~~~~~~~~~~~~~g~ 154 (401)
T 2bwn_A 93 HRRLEAEIAGLHQKEA--------ALVFSS-AYNANDATLSTLRVL---------FPGLIIYSDSLNHASMIEGIKRNAG 154 (401)
T ss_dssp HHHHHHHHHHHTTCSE--------EEEESC-HHHHHHHHHHHHHHH---------STTCEEEEETTCCHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhCCCc--------EEEECC-cHHHHHHHHHHHhcC---------CCCCEEEECchhhHHHHHHHHHcCC
Confidence 3445666777888643 355555 555887776654321 0567888999999999999999999
Q ss_pred CCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccc
Q 037144 198 DRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSAC 277 (502)
Q Consensus 198 g~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~ 277 (502)
+++.+|.+ |+++|+++++.... ..+.+|+++.++|++|.+.|+++|.++|++||+++++|++|+.+.+
T Consensus 155 ---~~~~v~~~-------d~~~le~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~ 222 (401)
T 2bwn_A 155 ---PKRIFRHN-------DVAHLRELIAADDP--AAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMY 222 (401)
T ss_dssp ---CEEEECTT-------CHHHHHHHHHHSCT--TSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTS
T ss_pred ---eEEEEcCC-------CHHHHHHHHHhhcc--CCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEecccccccc
Confidence 99999863 78999999875321 1356889999999999999999999999999999999999985432
Q ss_pred cCccchhh--hcCC-CCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccCCCccccc
Q 037144 278 ICPEFRHF--IDGV-ECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVGYKDWQIT 353 (502)
Q Consensus 278 ~~~~~~~~--~~~~-~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~ 353 (502)
. +..... ..++ +..|.+..+++|+++.|. |+++. ++... +.+.. ...+....
T Consensus 223 ~-~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G--G~~~~-~~~~~-~~l~~~~~~~~~~~------------------- 278 (401)
T 2bwn_A 223 G-PRGAGVAERDGLMHRIDIFNGTLAKAYGVFG--GYIAA-SARMV-DAVRSYAPGFIFST------------------- 278 (401)
T ss_dssp S-TTSCCHHHHHTCGGGCSEEEEESSSTTCSCC--EEEEE-CHHHH-HHHHHHCHHHHTSB-------------------
T ss_pred C-CCCceeeeccCccccCcEEEeechhhccCCC--CEEec-CHHHH-HHHHHhCcCceecC-------------------
Confidence 1 111111 1122 246888889999998653 66655 33322 22211 11111110
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcc
Q 037144 354 LCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYD 433 (502)
Q Consensus 354 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 433 (502)
.........+..+++.+...++.++.++..++++++.+.|+++ ++++. ++..++++|.+..
T Consensus 279 ~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~----------------- 339 (401)
T 2bwn_A 279 SLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPII-DHGSHIVPVVIGD----------------- 339 (401)
T ss_dssp CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCSSSCEEEECCC-----------------
T ss_pred CCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCCCeEEEEeCC-----------------
Confidence 0001123344566766656677889999999999999999987 78776 4555677776632
Q ss_pred cccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeE---CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 434 QYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIV---GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 434 ~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~---~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.....++.+.|. +.|..+.+...+ .+..++|++++ ..++++||++++++|+++.++
T Consensus 340 -----------~~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~-~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 340 -----------PVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPS-PVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp -----------HHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCC-TTSCHHHHHHHHHHHHHHC--
T ss_pred -----------hHHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEee-CCCCHHHHHHHHHHHHHHHHh
Confidence 111345667775 567643322211 13468999986 446777999999999988664
No 109
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.90 E-value=5.2e-22 Score=200.69 Aligned_cols=323 Identities=13% Similarity=0.070 Sum_probs=215.5
Q ss_pred HHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 91 GIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 91 ~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
..+.+.+...+... ...|...++..++++.+.+|+.+.+|.+... ....++|+|+++++..++.+..+
T Consensus 41 ~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~----~~~v~~~~g~~~a~~~~~~~l~~------- 109 (376)
T 2dou_A 41 EAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDP----RREALALIGSQEGLAHLLLALTE------- 109 (376)
T ss_dssp HHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCT----TTSEEEESSHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CccEEEcCCcHHHHHHHHHHhcC-------
Confidence 44566666655432 2344443467889999999999888986210 01589999999999877766532
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|+++..+|.++..+++..|. +++.+|++ +++.+|+++|++++++.+ .+|+++.++|++|.+
T Consensus 110 ----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~--~~~~~d~~~l~~~l~~~~------~~v~l~~p~nptG~~ 174 (376)
T 2dou_A 110 ----PEDLLLLPEVAYPSYFGAARVASL---RTFLIPLR--EDGLADLKAVPEGVWREA------KVLLLNYPNNPTGAV 174 (376)
T ss_dssp ----TTCEEEEESSCCHHHHHHHHHTTC---EEEEECBC--TTSSBCGGGSCHHHHHHE------EEEEECSSCTTTCCC
T ss_pred ----CCCEEEECCCCcHhHHHHHHHcCC---EEEEeeCC--CCCCCCHHHHHHhhccCc------eEEEECCCCCCcCcc
Confidence 567888888999999999999999 99999983 346799999999996543 477778899999999
Q ss_pred CC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhc--CCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhh
Q 037144 250 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID--GVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLST 323 (502)
Q Consensus 250 dp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~--~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~ 323 (502)
-| +++|+++|++||+++++|++|+.+.... .....+. +....+.+..++||+++.| ..+|+++.+ +.... .
T Consensus 175 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~-~ 251 (376)
T 2dou_A 175 ADWGYFEEALGLARKHGLWLIHDNPYVDQVYEG-EAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS-EEALA-R 251 (376)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSS-CCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC-HHHHH-H
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC-HHHHH-H
Confidence 66 7789999999999999999998765421 1111111 1124567788999999744 457887654 43322 2
Q ss_pred hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
+........ . + ...+...++...+ +.+.+++..++..++++++.+.|++. +++
T Consensus 252 l~~~~~~~~-------------------~--~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~ 306 (376)
T 2dou_A 252 LERVKGVID-------------------F--N--QYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--LSL 306 (376)
T ss_dssp HHHHHHHHC-------------------C--C--SCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEE
T ss_pred HHHHHHhcc-------------------c--C--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCc
Confidence 211000000 0 0 0122233333333 35678888889999999999999887 776
Q ss_pred ecCCCeeE-EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEe
Q 037144 402 AFPRNFSL-VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAA 478 (502)
Q Consensus 402 ~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~ 478 (502)
. ++..++ +.+.++.. . + ..++.+++.++|..+.++..+. +..++|+++
T Consensus 307 ~-~~~~~~~~~~~~~~~-~-------------------------~--~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~ 357 (376)
T 2dou_A 307 L-PPRATMYLWGRLPEG-V-------------------------D--DLEFGLRLVERGVALAPGRGFGPGGKGFVRIAL 357 (376)
T ss_dssp C-CCCBSSEEEEECCTT-C-------------------------C--HHHHHHHHHHTTEECEEGGGGCGGGTTEEEEEC
T ss_pred c-CCCeeEEEEEECCCC-C-------------------------C--HHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEe
Confidence 5 344443 44555321 1 0 2356777777886544433332 246899998
Q ss_pred cCCCCcHHHHHHHHHHHHHHH
Q 037144 479 GNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 479 ~~~~t~~~di~~~~~~l~~~~ 499 (502)
+. ++++|+++++.|.++.
T Consensus 358 ~~---~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 358 VR---PLEELLEAAKRIREAL 375 (376)
T ss_dssp CS---CHHHHHHHHHHHHHTC
T ss_pred cC---CHHHHHHHHHHHHHHh
Confidence 63 6779999999998754
No 110
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.4e-23 Score=215.67 Aligned_cols=347 Identities=9% Similarity=0.035 Sum_probs=222.7
Q ss_pred HHHHHHHHHHhhcCC-CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144 89 VAGIVGEMLSSGFNV-VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK 167 (502)
Q Consensus 89 ~~~~~~~~l~~~~n~-~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~ 167 (502)
+|..+.+.+...+.. ....|....+..++++++.+|+.+.+|.+... ...++|+||++|+..++.+..+
T Consensus 71 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-----~~v~~t~G~~~al~~~~~~l~~----- 140 (447)
T 3b46_A 71 PPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKA-----ENVTVTTGANEGILSCLMGLLN----- 140 (447)
T ss_dssp CCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCG-----GGEEEESHHHHHHHHHHHHHCC-----
T ss_pred CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEeCCHHHHHHHHHHHHcC-----
Confidence 345566777666654 23456555567899999999999988864321 2689999999999888877643
Q ss_pred hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCC----------CcccCHHHHHHHHHHHHhcCCccEEE
Q 037144 168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSS----------SYGLSAESVLSQINLDVEAELIPLFL 237 (502)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~----------~~~~d~~~Le~~i~~~~~~g~~p~~V 237 (502)
+++.|+++...|.++...++..|. +++.+|+++++ ++.+|+++|+++|+++ +.+|
T Consensus 141 ------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v 205 (447)
T 3b46_A 141 ------AGDEVIVFEPFFDQYIPNIELCGG---KVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSK------TKAV 205 (447)
T ss_dssp ------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTT------EEEE
T ss_pred ------CCCEEEEeCCCchhHHHHHHHcCC---EEEEEeCCCccccccccccccCcccCHHHHHHhhccC------CeEE
Confidence 567888888999999999999999 99999986532 4689999999988633 3478
Q ss_pred EEecCCcccccc---CChhHHHHHHHHhCCEEEeecccccccccCc--cchhhhcCCCCCCeeEEccCCcCC-CCCcceE
Q 037144 238 CATVGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHFIDGVECVDSFSFNPHKWLF-TTLDCCC 311 (502)
Q Consensus 238 v~t~gtt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~--~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~ 311 (502)
+++.++|++|.+ +++++|+++|++||+++++|++|+.+.+..+ .....-.+..+.|.++.++||+++ ....+|+
T Consensus 206 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~ 285 (447)
T 3b46_A 206 IINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGW 285 (447)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEE
T ss_pred EEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEE
Confidence 888999999998 5799999999999999999999987543211 111100111257888999999997 4456888
Q ss_pred EEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHH
Q 037144 312 LWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFE 390 (502)
Q Consensus 312 ~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~ 390 (502)
++.+++.... .+.....+.. + ++......++..+++... .+.++++.+++.++++++.
T Consensus 286 ~~~~~~~l~~-~l~~~~~~~~-----------------~---~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~ 344 (447)
T 3b46_A 286 VLSLNAELLS-YAAKAHTRIC-----------------F---ASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFT 344 (447)
T ss_dssp EECSCHHHHH-HHHHHHHHHT-----------------S---SCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred EEeCCHHHHH-HHHHHHhhcc-----------------C---CCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHH
Confidence 8874444332 2211000000 0 000001122223343321 3457788889999999999
Q ss_pred HHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC
Q 037144 391 RLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG 469 (502)
Q Consensus 391 ~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~ 469 (502)
+.|+++ ++++..+....++++.+..... +.....+.... ......++.+++.+ .|.++.++..+.
T Consensus 345 ~~L~~~-g~~~~~~~~g~~~~~~~~~~~~------------p~~~~~~~~~~-~~~~~~~~~~~l~~~~gV~v~pg~~f~ 410 (447)
T 3b46_A 345 SIFDEL-GLPYTAPEGTYFVLVDFSKVKI------------PEDYPYPEEIL-NKGKDFRISHWLINELGVVAIPPTEFY 410 (447)
T ss_dssp HHHHHH-TCCEECCSBSSEEEEECTTCCC------------CTTCCCCGGGS-SSCHHHHHHHHHHHHTCEECBCGGGGS
T ss_pred HHHHHC-CCeecCCCeeEEEEEecccccC------------ccccccccccc-cCCCHHHHHHHHHHhCCEEEECchHhC
Confidence 999987 7887643333344555532100 00000000000 00012356666654 576544433331
Q ss_pred -------CEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 470 -------GIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 470 -------g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
+..++|++++. ++++|+++++.|.++
T Consensus 411 ~~~~~~~~~~~iRls~~~---~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 411 IKEHEKAAENLLRFAVCK---DDAYLENAVERLKLL 443 (447)
T ss_dssp CGGGGGGGTTEEEEECCS---CHHHHHHHHHHGGGG
T ss_pred CCCccCCCCCEEEEEEeC---CHHHHHHHHHHHHHH
Confidence 24689999863 678999999999874
No 111
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.90 E-value=2.9e-21 Score=193.85 Aligned_cols=288 Identities=10% Similarity=0.011 Sum_probs=199.9
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR 199 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~ 199 (502)
++++++++++|.+.+ ..++|+|||+++..++.++ +.|+++..+|.++..+++..|.
T Consensus 65 ~l~~~la~~~~~~~~-------~i~~~~g~t~al~~~~~~~---------------d~vi~~~~~~~~~~~~~~~~g~-- 120 (361)
T 3ftb_A 65 RLNKSIENYLKLKDI-------GIVLGNGASEIIELSISLF---------------EKILIIVPSYAEYEINAKKHGV-- 120 (361)
T ss_dssp HHHHHHHHHHTCCSC-------EEEEESSHHHHHHHHHTTC---------------SEEEEEESCCTHHHHHHHHTTC--
T ss_pred HHHHHHHHHhCCCcc-------eEEEcCCHHHHHHHHHHHc---------------CcEEEecCChHHHHHHHHHcCC--
Confidence 345566777787654 5899999999997766543 3577888899999999999999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeeccccccc
Q 037144 200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSA 276 (502)
Q Consensus 200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~ 276 (502)
+++.+|++++ +.+++++|++++++ + .+|+++.++|++|.+-| +++|+++|++||+++++|++|+.+.
T Consensus 121 -~~~~~~~~~~--~~~~~~~l~~~l~~-~------~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 190 (361)
T 3ftb_A 121 -SVVFSYLDEN--MCIDYEDIISKIDD-V------DSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFT 190 (361)
T ss_dssp -EEEEEECCTT--SCCCHHHHHHHTTT-C------SEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGT
T ss_pred -eEEEeecCcc--cCCCHHHHHHhccC-C------CEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhc
Confidence 9999999864 47888999998865 3 37888899999999965 6677888889999999999998765
Q ss_pred ccCccchhh-hcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccC
Q 037144 277 CICPEFRHF-IDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITL 354 (502)
Q Consensus 277 ~~~~~~~~~-~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 354 (502)
.. ...... ..+......++.++||+++ .+...|++++.++............|
T Consensus 191 ~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~------------------------ 245 (361)
T 3ftb_A 191 GD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPW------------------------ 245 (361)
T ss_dssp CC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCTT------------------------
T ss_pred CC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCCC------------------------
Confidence 53 111000 1111123356678999997 44567777756655433221111100
Q ss_pred CCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EecCCCeeEEEEEeecCcchhhhhhcccCCCc
Q 037144 355 CRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFE-VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTY 432 (502)
Q Consensus 355 sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~-l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 432 (502)
....+..+++...+ ..++++++.++..++++++.+.|+++|+++ +. ++..+++.+.+....
T Consensus 246 --~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~-------------- 308 (361)
T 3ftb_A 246 --NINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVF-SPHANFVLCRLENIS-------------- 308 (361)
T ss_dssp --CSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEE-CCSSSEEEEEESSSC--------------
T ss_pred --CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceec-CCCCeEEEEEcCCCC--------------
Confidence 01233444444444 246778889999999999999999999998 65 556667777664311
Q ss_pred ccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144 433 DQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF 502 (502)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~ 502 (502)
..++.+.|.++|..+.++..+. +..++|++++ +++++++++++|+++.+.+
T Consensus 309 ---------------~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~~l 361 (361)
T 3ftb_A 309 ---------------GEKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAIK----DEKKNTKFLRALKGVENNL 361 (361)
T ss_dssp ---------------HHHHHHHHHTTTEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHHHTC
T ss_pred ---------------HHHHHHHHHHCCeEEeeCccCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHhcC
Confidence 2467777888886544433332 3568999975 5668999999999887653
No 112
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.90 E-value=2.1e-22 Score=206.70 Aligned_cols=346 Identities=12% Similarity=0.045 Sum_probs=221.9
Q ss_pred HHHHHHHHHHhhcCCC--CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144 89 VAGIVGEMLSSGFNVV--GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK 166 (502)
Q Consensus 89 ~~~~~~~~l~~~~n~~--~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~ 166 (502)
++..+.+.+...+... ...|....+..++++.+.+|+.+.+|.+... ....++|+||++++..++.+...
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~----~~~i~~~~g~~~a~~~~~~~~~~---- 113 (422)
T 3fvs_A 42 PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDP----LRNVLVTVGGYGALFTAFQALVD---- 113 (422)
T ss_dssp CCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCH----HHHEEEESHHHHHHHHHHHHHCC----
T ss_pred CCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC----CCcEEEECChHHHHHHHHHHHcC----
Confidence 3444555555555332 2355555567889999999999999975320 01589999999999888776533
Q ss_pred HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC----C------CCcccCHHHHHHHHHHHHhcCCccEE
Q 037144 167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK----S------SSYGLSAESVLSQINLDVEAELIPLF 236 (502)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~----~------~~~~~d~~~Le~~i~~~~~~g~~p~~ 236 (502)
+++.|+++...|.++...++..|. +++.+|+++ + .++.+|+++|+++++++ +.+
T Consensus 114 -------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~------~~~ 177 (422)
T 3fvs_A 114 -------EGDEVIIIEPFFDCYEPMTMMAGG---RPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR------TKA 177 (422)
T ss_dssp -------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTT------EEE
T ss_pred -------CCCEEEEcCCCchhhHHHHHHcCC---EEEEEecccccccccccccccCCCCCHHHHHhhcCCC------ceE
Confidence 567788888899999999999999 999999875 2 25689999999988643 347
Q ss_pred EEEecCCccccccC---ChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCCC-CCcce
Q 037144 237 LCATVGTTAITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLFT-TLDCC 310 (502)
Q Consensus 237 Vv~t~gtt~~G~id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~~-p~~~g 310 (502)
|+++.++|++|.+- ++++|+++|++||+++++|++|+.+.......... +......+.+..+++|+++. ....|
T Consensus 178 v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G 257 (422)
T 3fvs_A 178 LVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVG 257 (422)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCE
T ss_pred EEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEE
Confidence 88889999999997 59999999999999999999998754432111111 11111334677789999974 46678
Q ss_pred EEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---------cHHHHHHHHHH
Q 037144 311 CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---------GVANLRNFIRS 381 (502)
Q Consensus 311 ~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---------g~~g~~~~~~~ 381 (502)
+++.++. .+. .+........ + ....+..+++...+ ..+.++++.++
T Consensus 258 ~~~~~~~-~~~-~~~~~~~~~~-----------------~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 312 (422)
T 3fvs_A 258 WVLGPDH-IMK-HLRTVHQNSV-----------------F------HCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQA 312 (422)
T ss_dssp EEECCHH-HHH-HHHHHHHTTT-----------------C------CCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHH
T ss_pred EEEeCHH-HHH-HHHHHHhhcc-----------------C------CCCcHHHHHHHHHHhhccccccchHHHHHHHHHH
Confidence 8876543 222 1111000000 0 00222223332222 24567888899
Q ss_pred HHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCc
Q 037144 382 HVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGK 460 (502)
Q Consensus 382 ~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~ 460 (502)
..++++++.+.|++. ++++..+....++++.+....... .+ . ..... .....++.+.+.+ .|.
T Consensus 313 ~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~----------~~--~-~~~~~--~~~~~~~~~~ll~~~gv 376 (422)
T 3fvs_A 313 MQRCRDHMIRSLQSV-GLKPIIPQGSYFLITDISDFKRKM----------PD--L-PGAVD--EPYDRRFVKWMIKNKGL 376 (422)
T ss_dssp HHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEECHHHHHHC----------CC--C-CCCTT--CCHHHHHHHHHHHHHCE
T ss_pred HHHHHHHHHHHHHHc-CCeecCCCeeeEEEEechhhcccc----------cc--c-ccccc--cccHHHHHHHHHHhcCE
Confidence 999999999999998 888775544444444443210000 00 0 00000 0002244555443 476
Q ss_pred EEEEeeeE-------CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144 461 VFMTHAIV-------GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF 502 (502)
Q Consensus 461 ~~~~~~~~-------~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~ 502 (502)
.+.++..+ .+..++|++++. ++++|+++++.|+++.+++
T Consensus 377 ~v~~g~~f~~~~~~~~~~~~iRis~~~---~~e~i~~~l~~l~~~l~~l 422 (422)
T 3fvs_A 377 VAIPVSIFYSVPHQKHFDHYIRFCFVK---DEATLQAMDEKLRKWKVEL 422 (422)
T ss_dssp ECEEGGGGSCHHHHTTSCSEEEEECCC---CHHHHHHHHHHHHHHHHCC
T ss_pred EEeCcHHhcCCcCCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHhhC
Confidence 54443333 246799999863 7789999999999987753
No 113
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.89 E-value=2e-22 Score=202.66 Aligned_cols=305 Identities=12% Similarity=0.031 Sum_probs=195.7
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCc-EEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh--
Q 037144 111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGG-GVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-- 187 (502)
Q Consensus 111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~-g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-- 187 (502)
+|...++.+++++++++++|.+.+. . .++|+|||+++..++.+... +++.|++....|++
T Consensus 44 ~~~~~~~~~~~~~~la~~~g~~~~~------~~i~~t~g~t~a~~~~~~~l~~-----------~gd~vl~~~~~~~~~~ 106 (362)
T 2c0r_A 44 GAVYEAVHNEAQARLLALLGNPTGY------KVLFIQGGASTQFAMIPMNFLK-----------EGQTANYVMTGSWASK 106 (362)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCSSE------EEEEESSHHHHHHHHHHHHHCC-----------TTCEEEEEECSHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCc------EEEEECCCchHHHHHHHHhcCC-----------CCCeEEEEecCcHhHH
Confidence 5666778889999999999997531 3 46789999999877765532 55666666566666
Q ss_pred HHHHHHHcCCCCCCEEEEecCC--CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc-cCChhHHHHHHHHhCC
Q 037144 188 FQKAAQIVGIDRKNIRAIKTTK--SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA-VDPLKPLCDVAKQFGI 264 (502)
Q Consensus 188 ~~~aa~~~Glg~~~v~~v~~~~--~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~-idpl~eI~~i~~~~g~ 264 (502)
+...++..| +++.+|++. +.+..+|.++++ |++ .+.+|++++++|+||. +.|+++| +|+
T Consensus 107 ~~~~~~~~g----~~~~v~~~~~~~~~~~~~~~~~~--i~~------~t~~v~~~~~~n~tG~~~~~l~~i------~~~ 168 (362)
T 2c0r_A 107 ALKEAKLIG----DTHVAASSEASNYMTLPKLQEIQ--LQD------NAAYLHLTSNETIEGAQFKAFPDT------GSV 168 (362)
T ss_dssp HHHHHHHHS----CEEEEEECGGGTTCSCCCGGGCC--CCT------TEEEEEEESEETTTTEECSSCCCC------TTS
T ss_pred HHHHHHHhC----CeEEEecccccccccCCCHHHcc--cCC------CcCEEEEeCCcCccceeccccccc------CCC
Confidence 335556554 578888762 111235665553 422 2458899999999999 4899998 899
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccc
Q 037144 265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQE 344 (502)
Q Consensus 265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 344 (502)
|+|||+||+.+....+ +...|+++.++|||++ |.|+|++++++... +.+....+++...... ..
T Consensus 169 ~vivD~a~~~~~~~~~--------~~~~d~~~~s~~K~~g-~~G~G~l~~~~~~~--~~l~~~~~~~~~~~~~-----~~ 232 (362)
T 2c0r_A 169 PLIGDMSSDILSRPFD--------LNQFGLVYAGAQKNLG-PSGVTVVIVREDLV--AESPKHLPTMLRYDTY-----VK 232 (362)
T ss_dssp CEEEECTTTTTSSCCC--------GGGCSEEEEETTTTTC-CSSCEEEEEEGGGS--SSCCTTSCGGGCHHHH-----HH
T ss_pred EEEEEChhhccCCccc--------hhHCcEEEEecccccc-CcCcEEEEEcHHHH--hhccccCchHHhHHHH-----hh
Confidence 9999999987654322 1234999999999996 77899999875421 1121111111100000 00
Q ss_pred cCCCcccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCe-EEecCC---CeeEEEEEeecCc
Q 037144 345 VGYKDWQITLCRR-FRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERLVTSDKRF-EVAFPR---NFSLVCFRVTPSA 418 (502)
Q Consensus 345 ~~~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~~~~~-~l~~~~---~~~~v~f~~~~~~ 418 (502)
.. ...++-. .....+..+++.+... +++++.++..++++++.+.|++++++ ++..++ ...+++|.++.
T Consensus 233 ~~----~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 306 (362)
T 2c0r_A 233 NN----SLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS-- 306 (362)
T ss_dssp TT----TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC--
T ss_pred cc----CcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCC--
Confidence 00 0001111 1224455566655444 78999999999999999999998546 875422 24566776532
Q ss_pred chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
.....++.+.|.++|.++.++.. ....+|+|+++. ++++|++++++.|+++
T Consensus 307 --------------------------~~~~~~~~~~L~~~gi~~~~g~~--~~~~iRis~~~~-~~~e~i~~l~~~l~~~ 357 (362)
T 2c0r_A 307 --------------------------EELEKEFVKASEQEGFVGLKGHR--SVGGLRASIYNA-VPYESCEALVQFMEHF 357 (362)
T ss_dssp --------------------------HHHHHHHHHHHHHTTEESCBCCT--TTCSEEEECCTT-SCHHHHHHHHHHHHHH
T ss_pred --------------------------cchHHHHHHHHHHCCCeeccCCC--CCCEEEEECCCC-CCHHHHHHHHHHHHHH
Confidence 11234677777778874332211 124699998754 5678999999999988
Q ss_pred HHh
Q 037144 499 LEA 501 (502)
Q Consensus 499 ~~~ 501 (502)
.++
T Consensus 358 ~~~ 360 (362)
T 2c0r_A 358 KRS 360 (362)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 114
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.89 E-value=2.3e-22 Score=205.20 Aligned_cols=324 Identities=16% Similarity=0.081 Sum_probs=206.5
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (502)
..+.+.+...+... .|..++...+++ +.+++++|.+ ..+++++||+|+..++.+++-.
T Consensus 44 ~~v~~a~~~~~~~~--~y~~~~~~~~l~----~~la~~~~~~---------~~v~~~~Gt~a~~~~l~~~~~~------- 101 (399)
T 2oga_A 44 AETDAAIARVLDSG--RYLLGPELEGFE----AEFAAYCETD---------HAVGVNSGMDALQLALRGLGIG------- 101 (399)
T ss_dssp HHHHHHHHHHHHHT--CCSSSHHHHHHH----HHHHHHTTSS---------EEEEESCHHHHHHHHHHHTTCC-------
T ss_pred HHHHHHHHHHHhcC--CCCCchhHHHHH----HHHHHHHCCC---------eEEEecCHHHHHHHHHHHhCCC-------
Confidence 34445555444332 344445555555 5566777765 3688889999998887765211
Q ss_pred cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
+++.|+++..+|.++..+++..|+ +++.+|++++ ++.+|+++|+++|+++ +.+|+ .++++|.+.
T Consensus 102 ---~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~---~~n~tG~~~ 165 (399)
T 2oga_A 102 ---PGDEVIVPSHTYIASWLAVSATGA---TPVPVEPHED-HPTLDPLLVEKAITPR------TRALL---PVHLYGHPA 165 (399)
T ss_dssp ---TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCSS-SSSBCHHHHHHHCCTT------EEEEC---CBCGGGCCC
T ss_pred ---CcCEEEECCCccHHHHHHHHHCCC---EEEEEecCCC-CCCcCHHHHHHhcCCC------CeEEE---EeCCcCCcc
Confidence 567888899999999999999999 9999999753 4789999999998643 23454 357899999
Q ss_pred ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccC--CcCCCCCcceEEEeeCchhhhhhhcCCc
Q 037144 251 PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPH--KWLFTTLDCCCLWVKDPSCLLSTLSTNP 328 (502)
Q Consensus 251 pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~h--K~l~~p~~~g~~~~r~~~~l~~~~~~~~ 328 (502)
|+++|.++|+++|+++++|++|+.+.... ... +. ...|.+++++| |+++.|..+|+++.+++..........
T Consensus 166 ~l~~i~~l~~~~~~~li~Dea~~~g~~~~--~~~-~~--~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~- 239 (399)
T 2oga_A 166 DMDALRELADRHGLHIVEDAAQAHGARYR--GRR-IG--AGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLR- 239 (399)
T ss_dssp CHHHHHHHHHHHTCEECEECTTCTTCEET--TEE-TT--CTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHH-
T ss_pred CHHHHHHHHHHcCCEEEEECcccccCccC--Cee-cc--cccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHH-
Confidence 99999999999999999999997654321 111 11 12588999985 999865456666665554432211000
Q ss_pred ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC-e
Q 037144 329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN-F 407 (502)
Q Consensus 329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~-~ 407 (502)
.+ ... ..+.........+...+.+++++..+ +.+.++.++..++++++.+.|+++|++++...+. .
T Consensus 240 ~~---g~~--------~~~~~~~~g~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 306 (399)
T 2oga_A 240 NY---GSR--------QKYSHETKGTNSRLDEMQAAVLRIRL--AHLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDT 306 (399)
T ss_dssp BT---TCS--------STTCCCSCCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTE
T ss_pred hc---Ccc--------ccccccccccCCCcCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCC
Confidence 00 000 00000011111233455555554433 4456777888899999999999988888754332 2
Q ss_pred eEE--EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC----------C-----
Q 037144 408 SLV--CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG----------G----- 470 (502)
Q Consensus 408 ~~v--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----------g----- 470 (502)
+.+ .|...... ..++.+.|.++|..+....... +
T Consensus 307 ~~~~~~~~~~~~~-----------------------------~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 357 (399)
T 2oga_A 307 DPVWHLFTVRTER-----------------------------RDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGS 357 (399)
T ss_dssp ECCCSSEEEECSS-----------------------------HHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTS
T ss_pred cceeEEEEEECCC-----------------------------HHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCC
Confidence 211 23332211 2356677777786432211000 0
Q ss_pred --------EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 471 --------IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 471 --------~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..++|+++. ..++++|+++++++|+++.++
T Consensus 358 ~p~~~~~~~~~lRi~~~-~~~t~edi~~~~~~l~~~~~~ 395 (399)
T 2oga_A 358 LPRAESFARQVLSLPIG-PHLERPQALRVIDAVREWAER 395 (399)
T ss_dssp CHHHHHHHHHEEEECCS-TTCCHHHHHHHHHHHHHHHHS
T ss_pred ChhHHHHHhCEEEccCC-CCCCHHHHHHHHHHHHHHHHH
Confidence 258999975 567788999999999998765
No 115
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.89 E-value=7e-22 Score=201.50 Aligned_cols=329 Identities=11% Similarity=0.069 Sum_probs=209.8
Q ss_pred HHHHHHHHHhhcC-CCCcc------cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHH
Q 037144 90 AGIVGEMLSSGFN-VVGLD------WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARD 162 (502)
Q Consensus 90 ~~~~~~~l~~~~n-~~~~~------~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~ 162 (502)
+..+.+.+...+. ..... |...+...++|+.+++++++++|.+.. .+++++||+|+..++.++..
T Consensus 36 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~--------~i~~~sGt~a~~~a~~~~~~ 107 (405)
T 2vi8_A 36 SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHA--------NVQPHSGAQANMAVYFTVLE 107 (405)
T ss_dssp CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCce--------EEEecCcHHHHHHHHHHhcC
Confidence 4455666665553 22111 223456778998899999999998742 35456669999888877632
Q ss_pred HHHHHhCccCCCCeEEEeCCCCchhHHH-H--HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEE
Q 037144 163 RVLKKIGRENISKLVVYSSDQTHCAFQK-A--AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCA 239 (502)
Q Consensus 163 ~~~~~~~~~~~~~~~v~~s~~~H~s~~~-a--a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~ 239 (502)
+++.|+++...|.++.. . +...|.+. .++.+++++ .++.+|+++|++++++.. +.+|++
T Consensus 108 -----------~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~-~~~~~d~~~l~~~i~~~~-----~~~v~~ 169 (405)
T 2vi8_A 108 -----------HGDTVLGMNLSHGGHLTHGSPVNFSGVQY-NFVAYGVDP-ETHVIDYDDVREKARLHR-----PKLIVA 169 (405)
T ss_dssp -----------TTCEEEEECGGGTCCTTTTCTTSHHHHHS-EEEEECBCT-TTCSBCHHHHHHHHHHHC-----CSEEEE
T ss_pred -----------CCCEEEEecccccchhcccchhhhcccee-EEEeccccc-ccCCcCHHHHHHHHHhcC-----CeEEEE
Confidence 56778888888877643 1 12333211 566777653 257899999999997621 224554
Q ss_pred ecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchh
Q 037144 240 TVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSC 319 (502)
Q Consensus 240 t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~ 319 (502)
+ + +..|...|+++|.++|++||+++|+|++|+.+....+... ..+..+|+++.++||++++|.| |+++++ +..
T Consensus 170 ~-~-~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~---~~~~~~di~~~s~sK~~~g~~g-G~~~~~-~~~ 242 (405)
T 2vi8_A 170 A-A-AAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHP---NPVPYAHFVTTTTHKTLRGPRG-GMILCQ-EQF 242 (405)
T ss_dssp C-C-SSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC---CSTTTCSEEEEESSSTTCCCSC-EEEEEC-HHH
T ss_pred e-C-CCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCC---CccccCCEEEEeccccCCCCCC-eEEEEc-HHH
Confidence 3 2 3457777999999999999999999999985443322111 1234689999999999987777 888775 333
Q ss_pred hhhhhcCC-cccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 037144 320 LLSTLSTN-PQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK 397 (502)
Q Consensus 320 l~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~ 397 (502)
. +.+... ..+.. ++.. .....+.++++.+..++++++.++..++++++.+.|+++
T Consensus 243 ~-~~l~~~~~~~~~---------------------~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 299 (405)
T 2vi8_A 243 A-KQIDKAIFPGIQ---------------------GGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE- 299 (405)
T ss_dssp H-HHHHHHHTTTTC---------------------SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred H-HHHHhhhccccc---------------------CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-
Confidence 2 222110 01100 0000 111233345555444688899999999999999999998
Q ss_pred CeEEecCC-CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee------eECC
Q 037144 398 RFEVAFPR-NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA------IVGG 470 (502)
Q Consensus 398 ~~~l~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~------~~~g 470 (502)
++++..++ ..+++++.+...+. ....+.+.|.+.|..+..+. ...+
T Consensus 300 g~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~ 352 (405)
T 2vi8_A 300 GFTLVSGGTDNHLLLVDLRPQQL---------------------------TGKTAEKVLDEVGITVNKNTIPYDPESPFV 352 (405)
T ss_dssp TCEEGGGSCSSSEEEEECGGGTC---------------------------CHHHHHHHHHHHTEECEEECCTTCSSCTTT
T ss_pred CCeEecCCCCceEEEEEccCCCC---------------------------CHHHHHHHHHHcCceeccCcCccccCCCCC
Confidence 89987542 45667776643110 02345666666686543331 0112
Q ss_pred EEEEEEEecCC---CCcHHHHHHHHHHHHHHHHh
Q 037144 471 IYVLRFAAGNS---MTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 471 ~~~lR~~~~~~---~t~~~di~~~~~~l~~~~~~ 501 (502)
..++|+++..+ ..+++++++++++|+++.++
T Consensus 353 ~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 386 (405)
T 2vi8_A 353 TSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKN 386 (405)
T ss_dssp CSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTC
T ss_pred CCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhc
Confidence 45799998642 34688999999999987653
No 116
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.89 E-value=6.5e-22 Score=205.43 Aligned_cols=335 Identities=13% Similarity=0.049 Sum_probs=194.0
Q ss_pred HHHHHHHHHhhc-CCCCcc------cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHH
Q 037144 90 AGIVGEMLSSGF-NVVGLD------WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARD 162 (502)
Q Consensus 90 ~~~~~~~l~~~~-n~~~~~------~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~ 162 (502)
+..+.+.+...+ |..... |...+...++|+.+++++++++|.+.... +..++++|||+||+.++.+..+
T Consensus 67 ~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~----~~~v~~~sGt~An~~al~al~~ 142 (490)
T 2a7v_A 67 SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQW----GVNVQPYSGSPANLAVYTALLQ 142 (490)
T ss_dssp CHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTE----EEECCCSSHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccC----ceEEeCCchHHHHHHHHHHHcC
Confidence 444555554443 444322 23334456899999999999999976310 0135566899999888876643
Q ss_pred HHHHHhCccCCCCeEEEeCCCCchhHH--------HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCcc
Q 037144 163 RVLKKIGRENISKLVVYSSDQTHCAFQ--------KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIP 234 (502)
Q Consensus 163 ~~~~~~~~~~~~~~~v~~s~~~H~s~~--------~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p 234 (502)
+++.|+++...|.+.. +.+.+.|... .++.+++++ +++.+|+++|++++.+.. |
T Consensus 143 -----------pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~-~~~~~~vd~-~~~~iD~d~le~~l~~~~-----~ 204 (490)
T 2a7v_A 143 -----------PHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFF-ESMPYKLNP-KTGLIDYNQLALTARLFR-----P 204 (490)
T ss_dssp -----------SCEECCC--------------------------------CCBCT-TTCSBCHHHHHHHHHHHC-----C
T ss_pred -----------CCCEecccCccccccccchhhhcchhHHHcCCeE-EEEeccccc-ccCCcCHHHHHHHHhhcC-----C
Confidence 7889998887775421 1334556511 233444553 357999999999997532 3
Q ss_pred EEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEe
Q 037144 235 LFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWV 314 (502)
Q Consensus 235 ~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~ 314 (502)
.+|+++. +..|...|+++|+++|++||+++|+|+||+.+..........+ ..+|++++++||+|++|.| |++++
T Consensus 205 klIi~~~--s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~---~~aDiv~~S~hK~l~Gp~G-G~i~~ 278 (490)
T 2a7v_A 205 RLIIAGT--SAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF---KHADIVTTTTHKTLRGARS-GLIFY 278 (490)
T ss_dssp SEEEECC--SSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGG---GTCSEEEEESSGGGCSCSC-EEEEE
T ss_pred cEEEEcC--CCCCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCC---CCCCEEEECCcccCccccc-hheee
Confidence 3565543 3456678999999999999999999999876544322211112 3789999999999988865 88887
Q ss_pred eCchh-------------hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCC-chHHHHHHHHhcHHHHHHHHH
Q 037144 315 KDPSC-------------LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFR-SLKLWVVIRNFGVANLRNFIR 380 (502)
Q Consensus 315 r~~~~-------------l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~ 380 (502)
++... +.+.+. ..++. +.+++.... ..++..+++..-.+.+.++.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~l~~~i~---~~~~~-----------------g~qggp~~~~iaAla~Al~~~~~~~~~~~~~ 338 (490)
T 2a7v_A 279 RKGVKAVDPKTGREIPYTFEDRIN---FAVFP-----------------SLQGGPHNHAIAAVAVALKQACTPMFREYSL 338 (490)
T ss_dssp ECSEEEEETTTEEEEECCCHHHHH---HHHTT-----------------TTCCSCCHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ccchhcccccccchhhHHHHHHHH---HHhcc-----------------cCCCCchHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 76410 111100 00100 111111111 123333444433345688889
Q ss_pred HHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcC
Q 037144 381 SHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSG 459 (502)
Q Consensus 381 ~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 459 (502)
+..+++++|++.|++. |++++.. ....++.+.+.+.+.. ..++.+.|.+.|
T Consensus 339 ~~~~na~~L~~~L~~~-G~~v~~~~t~t~lv~vdl~~~g~~---------------------------~~~~~~~L~~~G 390 (490)
T 2a7v_A 339 QVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKGLD---------------------------GARAERVLELVS 390 (490)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTTTCC---------------------------HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHc-CcEEecCCCCCeEEEEEeCCCCCC---------------------------HHHHHHHHHhCC
Confidence 9999999999999997 8999743 3456676666543210 134555565667
Q ss_pred cEEEEeeeEC-----CEEEEEEEec---CCCCcHHHHHHHHHHHHHHHH
Q 037144 460 KVFMTHAIVG-----GIYVLRFAAG---NSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 460 ~~~~~~~~~~-----g~~~lR~~~~---~~~t~~~di~~~~~~l~~~~~ 500 (502)
+.+-..+... ....||++.. +...+++|++++.+.|.+++.
T Consensus 391 I~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~ 439 (490)
T 2a7v_A 391 ITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp EECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHH
Confidence 6432221111 1356999652 233577899999999988754
No 117
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.89 E-value=1.1e-21 Score=200.92 Aligned_cols=303 Identities=9% Similarity=0.048 Sum_probs=193.3
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH----
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA---- 192 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa---- 192 (502)
...++.+++++++|.+ .+++|+|||+|+..++.++.. +++.|+++...|.+.....
T Consensus 57 ~~~~l~~~la~~~g~~---------~~~~~~~gt~a~~~al~~l~~-----------~gd~vi~~~~~~~~~~~~~~~~~ 116 (412)
T 2cb1_A 57 TAKALEERLKALEGAL---------EAVVLASGQAATFAALLALLR-----------PGDEVVAAKGLFGQTIGLFGQVL 116 (412)
T ss_dssp HHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHTTCC-----------TTCEEEEETTCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchhHHHHHHHHH
Confidence 3445667788888864 378999999999888876532 5678888999998876654
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
+..|+ +++.++. |+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|++||+++|+|++|
T Consensus 117 ~~~g~---~~~~~~~--------~~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~ 179 (412)
T 2cb1_A 117 SLMGV---TVRYVDP--------EPEAVREALSAK------TRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTF 179 (412)
T ss_dssp TTTTC---EEEEECS--------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGG
T ss_pred HHcCC---EEEEECC--------CHHHHHHHhccC------CeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCC
Confidence 34677 7888875 388899888653 347888999999999999999999999999999999999
Q ss_pred ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeCchh-hhhhhcCCcccccCccC-CCCCccccc-CCC
Q 037144 273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKDPSC-LLSTLSTNPQYLKNEAT-DQEPKEQEV-GYK 348 (502)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~~~~-l~~~~~~~~~yl~~~~~-~~~~~~~~~-~~~ 348 (502)
+.+........ .++|+++.++||++++|.+ .|++++.++.. ........++....... ......... ...
T Consensus 180 ~~~~~~~~~~~------~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r 253 (412)
T 2cb1_A 180 GAAGALCRPLA------WGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVR 253 (412)
T ss_dssp GTTTTSCCGGG------GTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHH
T ss_pred ccccccCCccc------cCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHH
Confidence 87622221111 1689999999999988876 77777765321 00000000000000000 000000000 000
Q ss_pred ccc-ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CeeEE
Q 037144 349 DWQ-ITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-----------------NFSLV 410 (502)
Q Consensus 349 ~~~-~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-----------------~~~~v 410 (502)
..+ ...+....+...|..+.. .+.+.+++++..++++++.+.|.+.++++.+..| ..+++
T Consensus 254 ~~~~~~~g~~~~~~~a~~~~~~--l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv 331 (412)
T 2cb1_A 254 TLGLSLCGMALSPFNAYLLFQG--LETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPIL 331 (412)
T ss_dssp HHHTTTTCCCCCHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEE
T ss_pred HHHHHhcCCCCChHHhHHHHcC--CchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEE
Confidence 001 001112344555555543 3556777888889999999999999999855211 35688
Q ss_pred EEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee--------eE--------------
Q 037144 411 CFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA--------IV-------------- 468 (502)
Q Consensus 411 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--------~~-------------- 468 (502)
+|.+ +. . ..+.+.+.+.|... ... ..
T Consensus 332 ~~~~-~~---------------------------~---~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~ 379 (412)
T 2cb1_A 332 TLDL-GD---------------------------L---ERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEAR 379 (412)
T ss_dssp EEEC-SS---------------------------H---HHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHH
T ss_pred EEEe-CC---------------------------H---HHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHH
Confidence 8888 42 1 12333333446543 220 00
Q ss_pred --CC--EEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144 469 --GG--IYVLRFAAGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 469 --~g--~~~lR~~~~~~~t~~~di~~~~~~l~~ 497 (502)
.| ...+|+|++ ..+++++|+++.++|++
T Consensus 380 ~~~g~~~~~iR~s~g-~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 380 LQAGVTPGLVRVSVG-LEDPLDLLALFEEALEA 411 (412)
T ss_dssp HHTTCCTTEEEEECC-SSCHHHHHHHHHHHHHC
T ss_pred HhcCCCCCeEEEEec-cCCHHHHHHHHHHHHhh
Confidence 01 468999986 55677799999998864
No 118
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.89 E-value=5.3e-22 Score=214.97 Aligned_cols=249 Identities=12% Similarity=0.006 Sum_probs=166.5
Q ss_pred HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH-HHHcCC
Q 037144 119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA-AQIVGI 197 (502)
Q Consensus 119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a-a~~~Gl 197 (502)
.++.+.+++++|.+. ..++++|+|++|..++.+... +++.|+++...|.|+..+ +.+.|+
T Consensus 176 ~e~e~~lA~~~gae~--------~i~v~nGtt~an~~ai~al~~-----------pGD~VLv~~~~H~S~~~~~~~l~Ga 236 (730)
T 1c4k_A 176 VAAEKHAARVYNADK--------TYFVLGGSSNANNTVTSALVS-----------NGDLVLFDRNNHKSVYNSALAMAGG 236 (730)
T ss_dssp HHHHHHHHHHTTCSE--------EEEESSHHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHTTTTCC
T ss_pred HHHHHHHHHHHCCCc--------EEEECCHHHHHHHHHHHHhcC-----------CCCEEEEcCCchHHHHHHHHHHCCC
Confidence 345677899999875 357777777899877776543 678899999999999998 888888
Q ss_pred CCCCEEEEecCCCC---CcccCHHHH-----HHHHHHH-Hh--cCCcc-EEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 198 DRKNIRAIKTTKSS---SYGLSAESV-----LSQINLD-VE--AELIP-LFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 198 g~~~v~~v~~~~~~---~~~~d~~~L-----e~~i~~~-~~--~g~~p-~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
+++.++.+.++ .+.+|+++| +++|++. .+ ....| .+|+++.+ |++|.+.|+++|+++|++||++
T Consensus 237 ---~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~ 312 (730)
T 1c4k_A 237 ---RPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDY 312 (730)
T ss_dssp ---EEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSE
T ss_pred ---EEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCe
Confidence 88888764321 145889888 7777543 11 01123 46777777 4799999999999999999999
Q ss_pred EEeecccccccccCccchh--hhcC-CCCCC----eeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCC
Q 037144 266 VHVDAAYAGSACICPEFRH--FIDG-VECVD----SFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQ 338 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~--~~~~-~~~aD----si~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~ 338 (502)
+|||+||+++..+.+..+. .+.. -.++| +++.++||++++|.++|++++++... . ....++....
T Consensus 313 livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l-~----g~~~~i~~~~--- 384 (730)
T 1c4k_A 313 IEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHI-K----GQLRYCDHKH--- 384 (730)
T ss_dssp EEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGG-T----TSTTCCCHHH---
T ss_pred EEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhh-c----CcccccCHHH---
Confidence 9999999875444443321 1110 11577 99999999999988889999987642 1 1111111000
Q ss_pred CCcccccCCCcccccCCCCC--CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEecC
Q 037144 339 EPKEQEVGYKDWQITLCRRF--RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS-DKRFEVAFP 404 (502)
Q Consensus 339 ~~~~~~~~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~~~~l~~~ 404 (502)
+......++.+.+. ...++-.+++.+..++..+.+++..++++++++.|++ ++|++++.+
T Consensus 385 ------~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p 447 (730)
T 1c4k_A 385 ------FNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVP 447 (730)
T ss_dssp ------HHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSC
T ss_pred ------HHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccc
Confidence 00000011111111 1123334555555544467789999999999999998 789998754
No 119
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.89 E-value=1.8e-21 Score=204.13 Aligned_cols=334 Identities=10% Similarity=0.038 Sum_probs=212.0
Q ss_pred CcccccChhhHHHHHHHHHHHHHhcC-CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCC-CCeEEEeCC
Q 037144 105 GLDWISSPAAVELENIVMDWLGQMLD-LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENI-SKLVVYSSD 182 (502)
Q Consensus 105 ~~~~~~~p~~~~le~~~~~~l~~l~g-~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~-~~~~v~~s~ 182 (502)
...|..+.+..++++++.+++.+..| ++... ...++|+|+++++..++.+..+. |. +++.|+++.
T Consensus 122 ~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~-----~~i~~t~G~~~ai~~~~~~l~~~--------gd~~~d~Vlv~~ 188 (498)
T 3ihj_A 122 LGSYSASQGVNCIREDVAAYITRRDGGVPADP-----DNIYLTTGASDGISTILKILVSG--------GGKSRTGVMIPI 188 (498)
T ss_dssp ------CCSCHHHHHHHHHHHHHHTTTCCCCG-----GGEEEESSHHHHHHHHHHHHCCC--------CGGGSEEEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCc-----ccEEEcCCHHHHHHHHHHHHcCC--------CCCCCCEEEEeC
Confidence 35677777888999999999999985 64221 26899999999998777654321 00 235899999
Q ss_pred CCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---CChhHHHHHH
Q 037144 183 QTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---DPLKPLCDVA 259 (502)
Q Consensus 183 ~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---dpl~eI~~i~ 259 (502)
..|.++..+++.+|. +++.++++++++|.+|+++|+++|++... +..+.+|+++.++|+||.+ +++++|+++|
T Consensus 189 p~y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la 264 (498)
T 3ihj_A 189 PQYPLYSAVISELDA---IQVNYYLDEENCWALNVNELRRAVQEAKD-HCDPKVLCIINPGNPTGQVQSRKCIEDVIHFA 264 (498)
T ss_dssp SCCTHHHHHHHHTTC---EEEEEECBGGGTTBCCHHHHHHHHHHHTT-TSEEEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred CCchhHHHHHHHcCC---EEEEeeccccccCCCCHHHHHHHHHhhhc-cCCCeEEEEECCCCCCCCcCCHHHHHHHHHHH
Confidence 999999999999999 99999998765689999999999987532 1235678888999999999 5577899999
Q ss_pred HHhCCEEEeecccccccccCc----cchhhhcCC-----CCCCee-EEccCCcCC--CCCcceEEEe--eCchhhhhhhc
Q 037144 260 KQFGIWVHVDAAYAGSACICP----EFRHFIDGV-----ECVDSF-SFNPHKWLF--TTLDCCCLWV--KDPSCLLSTLS 325 (502)
Q Consensus 260 ~~~g~~lhVDaA~g~~~~~~~----~~~~~~~~~-----~~aDsi-~~~~hK~l~--~p~~~g~~~~--r~~~~l~~~~~ 325 (502)
++||+++++|.+|+.+.+... ........+ .....+ ..+++|.+. .....|++.+ .++........
T Consensus 265 ~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~ 344 (498)
T 3ihj_A 265 WEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVK 344 (498)
T ss_dssp HHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHH
T ss_pred HHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHH
Confidence 999999999999987655321 111111101 123334 457999994 4566777764 44443221111
Q ss_pred CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc------------HHHHHHHHHHHHHHHHHHHHHH
Q 037144 326 TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG------------VANLRNFIRSHVGMAKLFERLV 393 (502)
Q Consensus 326 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g------------~~g~~~~~~~~~~la~~l~~~l 393 (502)
....++. + ..+..++....+. .+...++.+++.++++++.+.|
T Consensus 345 ~~~~~~~----------------------~---~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L 399 (498)
T 3ihj_A 345 LLSVRLC----------------------P---PVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLF 399 (498)
T ss_dssp HHHHSCC----------------------C---CHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCC----------------------C---CHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1000110 0 1222222222221 1223566778889999999999
Q ss_pred hcCCCeEEecCCCeeEEEE-EeecCcchhhhhhcccCCCcccccccchhHhhHHHHHH--HHHHHHhcCcEEEEeeeE--
Q 037144 394 TSDKRFEVAFPRNFSLVCF-RVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRE--LLESINVSGKVFMTHAIV-- 468 (502)
Q Consensus 394 ~~~~~~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~l~~~g~~~~~~~~~-- 468 (502)
+++|++++. +++.+++.| ++..+.- .. ......+..... +.+.+.+.|.++.++..+
T Consensus 400 ~~~~g~~~~-~p~gg~~~~~~l~~p~~-~~----------------~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~ 461 (498)
T 3ihj_A 400 NQVPGIHCN-PLQGAMYAFPRIFIPAK-AV----------------EAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQ 461 (498)
T ss_dssp HTSTTEECC-CCCBSSEECCEECCCHH-HH----------------HHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCC
T ss_pred hcCCCcEec-CCCeEEEEEEeccCchh-hh----------------HHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCC
Confidence 999999886 566677666 3321100 00 000000000112 234445568766554433
Q ss_pred -CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 469 -GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 469 -~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.+..++|+++. .++++++++++.|.++.++
T Consensus 462 ~~~~~~~Ris~~---~~~e~l~~~i~~L~~~~~~ 492 (498)
T 3ihj_A 462 REGTYHFRMTIL---PPVEKLKTVLQKVKDFHIN 492 (498)
T ss_dssp CTTCCBEEEECC---SCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEeC---CCHHHHHHHHHHHHHHHHH
Confidence 34568999984 4678999999999887654
No 120
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.89 E-value=1.9e-21 Score=194.97 Aligned_cols=330 Identities=10% Similarity=0.031 Sum_probs=205.6
Q ss_pred CCcccccCCCCCCHHHHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHH
Q 037144 76 SPNYFAYFPATSSVAGIVGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALL 154 (502)
Q Consensus 76 ~p~~~~~~~~~~~~~~~~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~ 154 (502)
+..|++.-+ .+..+..+.+++..... .....|...+...+++ +++++++|.+. .++++|||+|+.
T Consensus 11 ~~~~l~~~~-~p~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~----~~la~~~~~~~---------~i~~~~G~~a~~ 76 (357)
T 3lws_A 11 QTTGQISGH-GKRNVGVLKTAFAAVADEMASDQYGTGAIIEPFE----QKFADVLGMDD---------AVFFPSGTMAQQ 76 (357)
T ss_dssp TCSEESSBS-SCCBHHHHHHHHTTSCTTCBCEETTEETTHHHHH----HHHHHHHTCSE---------EEEESCHHHHHH
T ss_pred hhcccccCC-CCCCHHHHHHHHHHhhcccCcccccCChHHHHHH----HHHHHHhCCCc---------EEEecCcHHHHH
Confidence 345666654 34555666666554221 1223455556555555 55777888743 477788999998
Q ss_pred HHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHH---HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhc
Q 037144 155 CTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQK---AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEA 230 (502)
Q Consensus 155 ~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~---aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~ 230 (502)
.++.+.... ++ .+|+++...|++... .+...|+ +++.+|.+ ++.+|+++|+++.+
T Consensus 77 ~al~~~~~~----------gd~~~vi~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~---~~~~d~~~l~~~~~----- 135 (357)
T 3lws_A 77 VALRIWSDE----------TDNRTVAYHPLCHLEIHEQDGLKELHPI---ETILVGAA---DRLMTLDEIKALPD----- 135 (357)
T ss_dssp HHHHHHHHH----------HTCCEEEECTTCHHHHSSTTHHHHHSSC---EEEECSCT---TSCCCHHHHHTCCS-----
T ss_pred HHHHHHhhc----------CCCcEEEecccceeeeeccchhhhccCc---EEEEecCC---CCCcCHHHHhcCcC-----
Confidence 888776653 22 278888888887655 3456677 78877743 46899999998721
Q ss_pred CCccEEEEEecCCccc-cccCC---hhHHHHHHHHhCCEEEeecccccccc--cCccchhhhcCCCCCCeeEEccCCcCC
Q 037144 231 ELIPLFLCATVGTTAI-TAVDP---LKPLCDVAKQFGIWVHVDAAYAGSAC--ICPEFRHFIDGVECVDSFSFNPHKWLF 304 (502)
Q Consensus 231 g~~p~~Vv~t~gtt~~-G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~--~~~~~~~~~~~~~~aDsi~~~~hK~l~ 304 (502)
+.+|+++.++|++ |.+-| +++|+++|++||+|+|+|+||..... ......... ..+|+++.++||+++
T Consensus 136 ---~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~ 209 (357)
T 3lws_A 136 ---IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA---GLFDSIYISFYKGLG 209 (357)
T ss_dssp ---CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH---TTSSEEEEESSSTTC
T ss_pred ---cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH---hcCCEEEEeccccCC
Confidence 2378888888887 88765 89999999999999999999862211 111112211 367899999999998
Q ss_pred CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHH
Q 037144 305 TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVG 384 (502)
Q Consensus 305 ~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~ 384 (502)
+|.+ |+++ .++.......... ....... +....+. ..++..+ +...+.+++..+
T Consensus 210 ~~~g-g~~~-~~~~~~~~~~~~~-~~~~~~~--------------------~~~~~~~-~~~~~~l--~~~~~~~~~~~~ 263 (357)
T 3lws_A 210 GIAG-AILA-GPAAFCQTARIWK-RRYGGDL--------------------ISLYPYI-VSADYYY--ELRKDRMGQYYE 263 (357)
T ss_dssp CSSC-EEEE-ECHHHHHHHHHHH-HHTTCCC--------------------SCCHHHH-HHHHHHH--HHHTTCHHHHHH
T ss_pred CCce-EEEE-cCHHHHHHHHHHH-HHhcCCc--------------------ccchHHH-HHHHHHH--HHHHHHHHHHHH
Confidence 7876 6654 4554332221100 0010000 0001111 1112222 113344555678
Q ss_pred HHHHHHHHHhcCCCeEEe-cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEE
Q 037144 385 MAKLFERLVTSDKRFEVA-FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFM 463 (502)
Q Consensus 385 la~~l~~~l~~~~~~~l~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 463 (502)
+++++.+.|+++|++++. .++..+++++.+.... .....++.+.|.++|..+.
T Consensus 264 ~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~l~~~Gi~v~ 317 (357)
T 3lws_A 264 QAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQA--------------------------ADISPKLEQVQEETGLGFV 317 (357)
T ss_dssp HHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCH--------------------------HHHHHHHHHHHHHHCEESC
T ss_pred HHHHHHHHHHhCCCCeeccCCCcceEEEEEecCCh--------------------------HHHHHHHHHHHHhcCeEEe
Confidence 899999999999999984 4667778877775421 1113466777777786543
Q ss_pred EeeeE-CCEEEEEEEecCCC--CcHHHHHHHHHHHHHH
Q 037144 464 THAIV-GGIYVLRFAAGNSM--TMESHVRAAWTVVQEH 498 (502)
Q Consensus 464 ~~~~~-~g~~~lR~~~~~~~--t~~~di~~~~~~l~~~ 498 (502)
++... .+..++|+++...+ .++++++++++.|.+.
T Consensus 318 ~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~a 355 (357)
T 3lws_A 318 GYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQA 355 (357)
T ss_dssp SCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHH
T ss_pred cccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHh
Confidence 33222 46679999986443 5777888888888765
No 121
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.89 E-value=3e-21 Score=194.91 Aligned_cols=318 Identities=10% Similarity=0.019 Sum_probs=211.5
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
|..+.+.+...+ .....|....+..++++++.+|+.+.+|.+... ...++|+||++++..++.+...
T Consensus 38 ~~~v~~a~~~~~-~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~-----~~i~~t~g~~~al~~~~~~~~~------- 104 (376)
T 3ezs_A 38 PKFIQDALKNHT-HSLNIYPKSAFEESLRAAQRGFFKRRFKIELKE-----NELISTLGSREVLFNFPSFVLF------- 104 (376)
T ss_dssp CHHHHHHHHTTG-GGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCG-----GGEEEESSSHHHHHHHHHHHTT-------
T ss_pred CHHHHHHHHHhh-hhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCH-----HHEEECcCcHHHHHHHHHHHcC-------
Confidence 445666666655 223345544556889999999999999983211 2689999999999888776643
Q ss_pred ccCCC--CeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 170 RENIS--KLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 170 ~~~~~--~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
+ ++.|+++..+|.++..+++..|. +++.+|+++++ .+++ +|++++.++++ +|+++.++|++|
T Consensus 105 ----~~~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~--~~~~-~l~~~~~~~~~------~v~~~~p~nptG 168 (376)
T 3ezs_A 105 ----DYQNPTIAYPNPFYQIYEGAAKFIKA---KSLLMPLTKEN--DFTP-SLNEKELQEVD------LVILNSPNNPTG 168 (376)
T ss_dssp ----TCSSCEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGG--TSCC-CCCHHHHHHCS------EEEECSSCTTTC
T ss_pred ----CCCCCEEEEecCCcHhHHHHHHHcCC---EEEEcccCCCC--Ccch-hHHhhhccCCC------EEEEcCCCCCcC
Confidence 5 67888999999999999999999 99999998643 4555 77888876443 777788999999
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcC-------CCCCCeeEEccCCcCC-CCCcceEEEeeC
Q 037144 248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDG-------VECVDSFSFNPHKWLF-TTLDCCCLWVKD 316 (502)
Q Consensus 248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~-------~~~aDsi~~~~hK~l~-~p~~~g~~~~r~ 316 (502)
.+-| +++|+++|++||+++++|++|+.+..... ....... ....+.+..++||+++ .+..+|+++. +
T Consensus 169 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~ 246 (376)
T 3ezs_A 169 RTLSLEELISWVKLALKHDFILINDECYSEIYENTP-PPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAG-D 246 (376)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSC-CCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEE-C
T ss_pred CCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC-CCCHHHccccccccccCcEEEEecchhccCCccceeEEEee-C
Confidence 9966 67777889999999999999987654321 1111110 1256688889999996 4556787765 3
Q ss_pred chhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhc
Q 037144 317 PSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTS 395 (502)
Q Consensus 317 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~ 395 (502)
+.... .+.....+.. + ....+..+++...+ ..+.+++..++..++++++.+.|+
T Consensus 247 ~~~~~-~~~~~~~~~~-----------------~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~- 301 (376)
T 3ezs_A 247 SRLLE-KYKAFRAYLG-----------------Y------TSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK- 301 (376)
T ss_dssp HHHHH-HHHHHHTTTC-----------------C------CCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST-
T ss_pred HHHHH-HHHHHHhhhc-----------------C------CCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc-
Confidence 43322 2211000000 0 01223333333332 134577888888899999999887
Q ss_pred CCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC----C
Q 037144 396 DKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG----G 470 (502)
Q Consensus 396 ~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~----g 470 (502)
++. .+....++.+.+. . ..++.+++.+ .|..+.++..+. +
T Consensus 302 --~~~--~~~~~~~~~~~~~-~------------------------------~~~~~~~l~~~~gi~v~~g~~~~~~~~~ 346 (376)
T 3ezs_A 302 --NTL--IYPYSFYVYLPVQ-N------------------------------GENFAKTLYQNEGIITLPALYLGRNRIG 346 (376)
T ss_dssp --TCC--CCSBSSEEEEECS-C------------------------------HHHHHHHHHHHHCCBCEEGGGGCSTTTT
T ss_pred --CCC--CCCcceEEEEECC-C------------------------------HHHHHHHHHHhCCEEEeCcHHhCCCCCC
Confidence 454 2333334444443 1 2355666665 687654433322 4
Q ss_pred EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 471 IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 471 ~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..++|++++. ++++|+++++.|.++.++
T Consensus 347 ~~~iRis~~~---~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 347 ADYVRLALVY---DTPLLEKPLEIIETYREN 374 (376)
T ss_dssp TTEEEEECCS---CHHHHHHHHHHHHHHHCC
T ss_pred CCeEEEEEcC---CHHHHHHHHHHHHHHHHh
Confidence 5799999863 778999999999988754
No 122
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.88 E-value=1.8e-21 Score=197.77 Aligned_cols=327 Identities=15% Similarity=0.105 Sum_probs=203.6
Q ss_pred HHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCC
Q 037144 94 GEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENI 173 (502)
Q Consensus 94 ~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~ 173 (502)
.+.+...+.... +..++...++++ .+++++|.+ .+++|+|||+|+..++.+.+-.
T Consensus 23 ~~a~~~~~~~~~--~~~~~~~~~l~~----~la~~~~~~---------~~~~~~~gt~al~~~~~~~~~~---------- 77 (393)
T 1mdo_A 23 LAAVKTVLDSGW--ITTGPKNQELEA----AFCRLTGNQ---------YAVAVSSATAGMHIALMALGIG---------- 77 (393)
T ss_dssp HHHHHHHHHHTC--CSSSHHHHHHHH----HHHHHHCCS---------EEEEESCHHHHHHHHHHHTTCC----------
T ss_pred HHHHHHHHhcCC--cCCChHHHHHHH----HHHHHhCCC---------cEEEecChHHHHHHHHHHcCCC----------
Confidence 344544443321 223455555555 456666654 3789999999998887765211
Q ss_pred CCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChh
Q 037144 174 SKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLK 253 (502)
Q Consensus 174 ~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~ 253 (502)
+++.|+++..+|.++..+++..|+ +++.+|++++ ++.+|+++|+++|+++ +.+|+++ +++|.+.|++
T Consensus 78 ~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~---~~~G~~~~~~ 144 (393)
T 1mdo_A 78 EGDEVITPSMTWVSTLNMIVLLGA---NPVMVDVDRD-TLMVTPEHIEAAITPQ------TKAIIPV---HYAGAPADLD 144 (393)
T ss_dssp TTCEEEEESSSCHHHHHHHHHTTC---EEEEECBCTT-TCCBCHHHHHHHCCTT------EEEECCB---CGGGCCCCHH
T ss_pred CCCEEEeCCCccHhHHHHHHHCCC---EEEEEeccCC-cCCCCHHHHHHhcCCC------ceEEEEe---CCCCCcCCHH
Confidence 567889999999999999999999 9999999853 4789999999998643 3355554 4799999999
Q ss_pred HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccC--CcCCCCCcceEEEeeCchhhhhhhcCCcccc
Q 037144 254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPH--KWLFTTLDCCCLWVKDPSCLLSTLSTNPQYL 331 (502)
Q Consensus 254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~h--K~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl 331 (502)
+|.++|+++|+++++|++|+.+..... +.. +. .|++++++| |+++++ ..|+++.+++..............
T Consensus 145 ~i~~l~~~~~~~li~D~a~~~g~~~~~--~~~--~~--~d~~~~S~~k~K~l~~~-~~g~~~~~~~~~~~~l~~~~~~~~ 217 (393)
T 1mdo_A 145 AIYALGERYGIPVIEDAAHATGTSYKG--RHI--GA--RGTAIFSFHAIKNITCA-EGGIVVTDNPQFADKLRSLKFHGL 217 (393)
T ss_dssp HHHHHHHHHTCCBCEECTTCTTCEETT--EET--TS--SSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHTBTTE
T ss_pred HHHHHHHHcCCeEEEECccccCCeECC--eec--CC--CCeEEEeCCCCCccccc-cceEEEeCCHHHHHHHHHHHhcCC
Confidence 999999999999999999985543321 111 11 899999999 998654 456666654543322111000000
Q ss_pred cCccCCCCCcccccCCCccccc---CC--CCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-
Q 037144 332 KNEATDQEPKEQEVGYKDWQIT---LC--RRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR- 405 (502)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~---~s--r~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~- 405 (502)
...... .......+.++ .+ .+..++....++. ..+++++..++..++++++.+.|.+++ +++...+
T Consensus 218 ~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~--~l~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~ 289 (393)
T 1mdo_A 218 GVDAWD-----RQSGGRAPQAEVLAPGYKYNLPDLNAAIALA--QLQKLDALNARRAAIAAQYHQAMADLP-FQPLSLPS 289 (393)
T ss_dssp ECC----------------CCEESSCCCBCCCCHHHHHHHHH--HHHTHHHHHHHHHHHHHHHHHHHHTSS-CEECCCCS
T ss_pred cccchh-----hhcccccccccccccCccCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccCCC
Confidence 000000 00000001111 11 1223333333333 345677888888999999999999986 8876432
Q ss_pred -----CeeEEEEEeecC--cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE----------
Q 037144 406 -----NFSLVCFRVTPS--AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV---------- 468 (502)
Q Consensus 406 -----~~~~v~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------- 468 (502)
...++++++.+. +. ...++.+.|.+.|..+..+...
T Consensus 290 ~~~~~~~~~~~v~~~~~~~~~---------------------------~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~ 342 (393)
T 1mdo_A 290 WEHIHAWHLFIIRVDEARCGI---------------------------TRDALMASLKTKGIGTGLHFRAAHTQKYYRER 342 (393)
T ss_dssp SCEECCCSCEEEECCHHHHSS---------------------------CHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHH
T ss_pred CCCCceeEEEEEEeccccccc---------------------------CHHHHHHHHHhCCCCcccccCccccChhhhcc
Confidence 223566666420 00 0345677777778643221100
Q ss_pred ------C-----CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 469 ------G-----GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 469 ------~-----g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
. +..++|+++. ..++++||++++++|+++.+.
T Consensus 343 ~~~~~~~~~~~~~~~~lRi~~~-~~~t~~~i~~~~~~l~~~~~~ 385 (393)
T 1mdo_A 343 FPTLTLPDTEWNSERICSLPLF-PDMTESDFDRVITALHQIAGQ 385 (393)
T ss_dssp STTCCCHHHHHHHTTEEEECCC-TTCCHHHHHHHHHHHHHHHC-
T ss_pred CCccCChhHHHHHhCEEEecCC-CCCCHHHHHHHHHHHHHHHhc
Confidence 0 1237999975 556778999999999988653
No 123
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.88 E-value=3.5e-21 Score=193.75 Aligned_cols=313 Identities=12% Similarity=0.049 Sum_probs=202.4
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (502)
..+.+.+...+.. ...|. .+...++++. +++++|.+.+ ..++|+|+++++..++.+. .
T Consensus 40 ~~v~~a~~~~~~~-~~~y~-~~~~~~l~~~----la~~~~~~~~-------~v~~~~g~~~al~~~~~~~--~------- 97 (364)
T 1lc5_A 40 VSVKRALIDNLDC-IERYP-DADYFHLHQA----LARHHQVPAS-------WILAGNGETESIFTVASGL--K------- 97 (364)
T ss_dssp HHHHHHHHHTGGG-GGSCC-CTTCHHHHHH----HHHHHTSCGG-------GEEEESSHHHHHHHHHHHH--C-------
T ss_pred HHHHHHHHHHHHH-hhcCC-CCCHHHHHHH----HHHHHCcCHH-------HEEECCCHHHHHHHHHHHc--C-------
Confidence 3455666555533 22342 2344555554 5566677644 5899999999998777665 1
Q ss_pred cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
+ +.|++...+|.++..+++..|. +++.+|.++++++.+ ++++.+.+.+ .+.+|+++.++|++|.+-
T Consensus 98 ---g-d~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~-l~~~~~~~~~------~~~~v~i~~p~nptG~~~ 163 (364)
T 1lc5_A 98 ---P-RRAMIVTPGFAEYGRALAQSGC---EIRRWSLREADGWQL-TDAILEALTP------DLDCLFLCTPNNPTGLLP 163 (364)
T ss_dssp ---C-SEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGGTTCC-CTTHHHHCCT------TCCEEEEESSCTTTCCCC
T ss_pred ---C-CeEEEeCCCcHHHHHHHHHcCC---eEEEEeCCcccccch-hHHHHHhccC------CCCEEEEeCCCCCCCCCC
Confidence 3 5677788899999999999999 999999875222332 3433333321 234677788999999998
Q ss_pred C---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcC
Q 037144 251 P---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLST 326 (502)
Q Consensus 251 p---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~ 326 (502)
| +++|+++|++||+++++|++|+.+..........+ +....|.++.++||+++.| ..+|++++.++.........
T Consensus 164 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~ 242 (364)
T 1lc5_A 164 ERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPAL-KDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQ 242 (364)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGC-TTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHh-ccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHh
Confidence 8 99999999999999999999987653211111111 1124678888999999744 45788873444433221111
Q ss_pred CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 037144 327 NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR 405 (502)
Q Consensus 327 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~ 405 (502)
...| ....+..+++...+. .+.+++..++..++++++.+.|+++|++++. ++
T Consensus 243 ~~~~--------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~ 295 (364)
T 1lc5_A 243 QMPW--------------------------SVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVY-PG 295 (364)
T ss_dssp SCTT--------------------------CSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEC-CC
T ss_pred CCCC--------------------------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEEC-CC
Confidence 1000 013344455555543 3567788888899999999999998899876 55
Q ss_pred CeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--CEEEEEEEecCCCC
Q 037144 406 NFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--GIYVLRFAAGNSMT 483 (502)
Q Consensus 406 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t 483 (502)
..+++.+.+... ..++.+.|.++|..+.++..+. +..++|++++
T Consensus 296 ~g~~~~~~~~~~------------------------------~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~---- 341 (364)
T 1lc5_A 296 RANYLLLRCERE------------------------------DIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR---- 341 (364)
T ss_dssp SSSEEEEEESCT------------------------------TCCHHHHHHTTTEECEECTTSTTCCTTEEEEECC----
T ss_pred CCeEEEEECCCc------------------------------HHHHHHHHHHCCcEEeeCcccCCCCCCEEEEEeC----
Confidence 666666655321 1245666777786544433232 2468999975
Q ss_pred cHHHHHHHHHHHHHHHHh
Q 037144 484 MESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 484 ~~~di~~~~~~l~~~~~~ 501 (502)
+++++++++++|+++.++
T Consensus 342 ~~~~~~~l~~~l~~~~~~ 359 (364)
T 1lc5_A 342 SAAQNERLLAALRNVLTG 359 (364)
T ss_dssp CHHHHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHHHHhhc
Confidence 467899999999887653
No 124
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.88 E-value=2.1e-21 Score=198.77 Aligned_cols=309 Identities=11% Similarity=0.052 Sum_probs=191.3
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..+...++|+.+.+++++++|.+.. . +++++||+|+..++.+... +++.|+++..+|.++.
T Consensus 65 ~~~~~~~~~~~~~~~la~~~g~~~~-------~-i~~~sGt~a~~~~~~~~~~-----------~gd~vl~~~~~~~~~~ 125 (417)
T 3n0l_A 65 GCEFVDEIETLAIERCKKLFNCKFA-------N-VQPNSGSQANQGVYAALIN-----------PGDKILGMDLSHGGHL 125 (417)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSEE-------E-CCCSSHHHHHHHHHHHHSC-----------TTCEEEEECC------
T ss_pred cchHHHHHHHHHHHHHHHHhCCCCc-------c-eEeccHHHHHHHHHHHhcC-----------CCCEEEeccccccccc
Confidence 3456678999999999999998653 2 4445558999888776643 6778888888887765
Q ss_pred H---HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144 190 K---AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV 266 (502)
Q Consensus 190 ~---aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l 266 (502)
. .....|.+. .++.++++ +++.+|+++|+++|++.. +.+|+++.++ .|.+.|+++|.++|++||+++
T Consensus 126 ~~~~~~~~~g~~~-~~~~~~~~--~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~--~G~~~~l~~i~~l~~~~~~~l 195 (417)
T 3n0l_A 126 THGAKVSSSGKMY-ESCFYGVE--LDGRIDYEKVREIAKKEK-----PKLIVCGASA--YARVIDFAKFREIADEIGAYL 195 (417)
T ss_dssp ----------CCS-EEEEECCC--TTSSCCHHHHHHHHHHHC-----CSEEEECCSS--CCSCCCHHHHHHHHHHHTCEE
T ss_pred chhhhhhhhccee-eeEeccCC--CCCCcCHHHHHHHHHhcC-----CeEEEECCcc--cCccCCHHHHHHHHHHcCCEE
Confidence 4 334445411 34455555 357899999999997421 2366666655 399999999999999999999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccC
Q 037144 267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVG 346 (502)
Q Consensus 267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (502)
++|++|+.+......... .+..+|+++.++||++.+|. .|+++.+++.... .+.. .....
T Consensus 196 i~Dea~~~g~~~~~~~~~---~~~~~di~~~s~sK~l~g~~-~G~~~~~~~~~~~-~~~~---~~~~~------------ 255 (417)
T 3n0l_A 196 FADIAHIAGLVVAGEHPS---PFPYAHVVSSTTHKTLRGPR-GGIIMTNDEELAK-KINS---AIFPG------------ 255 (417)
T ss_dssp EEECTTTHHHHHTTSSCC---CTTTCSEEEEESSTTTCSCS-CEEEEESCHHHHH-HHHH---HHTTT------------
T ss_pred EEECccchhhhhcccCCC---ccccceEEEeeCccccCCCC-eeEEEECCHHHHH-HHhh---hhCCc------------
Confidence 999997655443222111 12367999999999997776 4777776544332 2211 00000
Q ss_pred CCcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhh
Q 037144 347 YKDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLR 424 (502)
Q Consensus 347 ~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~ 424 (502)
..++.. ....++..++.....+++.++.++..++++++.+.|++ .++++... ...+++.+.+.+.+..
T Consensus 256 -----~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~~---- 325 (417)
T 3n0l_A 256 -----IQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD-RKFKLVSDGTDNHLVLMSFLDREFS---- 325 (417)
T ss_dssp -----TCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGGSCSSSEEEEECTTSSSC----
T ss_pred -----ccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCceEEEEEcccCCCC----
Confidence 000000 01223444555545567889999999999999999998 58888642 3344555555432210
Q ss_pred hcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee------ECCEEEEEEEecCC---CCcHHHHHHHHHHH
Q 037144 425 TKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI------VGGIYVLRFAAGNS---MTMESHVRAAWTVV 495 (502)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~------~~g~~~lR~~~~~~---~t~~~di~~~~~~l 495 (502)
...+.+.+.+.|..+..... ......+|++.... ..++++|+++++.|
T Consensus 326 -----------------------~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l 382 (417)
T 3n0l_A 326 -----------------------GKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYI 382 (417)
T ss_dssp -----------------------HHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHH
T ss_pred -----------------------HHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHH
Confidence 23455556666764332211 01234699986422 24578999999999
Q ss_pred HHHHH
Q 037144 496 QEHLE 500 (502)
Q Consensus 496 ~~~~~ 500 (502)
.++.+
T Consensus 383 ~~~l~ 387 (417)
T 3n0l_A 383 ADILD 387 (417)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98765
No 125
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.88 E-value=2.4e-21 Score=197.28 Aligned_cols=329 Identities=12% Similarity=0.031 Sum_probs=199.4
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH
Q 037144 112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA 191 (502)
Q Consensus 112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 191 (502)
+...++++. +++++|.+ .+++++|||+|+..++.+.+-. +++.|+++..+|.++..+
T Consensus 32 ~~~~~l~~~----la~~~~~~---------~v~~~~ggt~al~~~~~~l~~~----------~gd~Vl~~~~~~~~~~~~ 88 (394)
T 1o69_A 32 EFVNRFEQS----VKDYSKSE---------NALALNSATAALHLALRVAGVK----------QDDIVLASSFTFIASVAP 88 (394)
T ss_dssp HHHHHHHHH----HHHHHCCS---------EEEEESCHHHHHHHHHHHTTCC----------TTCEEEEESSSCGGGTHH
T ss_pred hHHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHcCCC----------CCCEEEECCCccHHHHHH
Confidence 445555554 55666652 4899999999998887765211 567889999999999999
Q ss_pred HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecc
Q 037144 192 AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 271 (502)
Q Consensus 192 a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA 271 (502)
++..|+ +++.+|++. ++.+|+++|+++|++.. ..+.+|+++. ++|...|+++|.++|+++|+++++|+|
T Consensus 89 ~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~---~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea 157 (394)
T 1o69_A 89 ICYLKA---KPVFIDCDE--TYNIDVDLLKLAIKECE---KKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAA 157 (394)
T ss_dssp HHHTTC---EEEEECBCT--TSSBCHHHHHHHHHHCS---SCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECT
T ss_pred HHHcCC---EEEEEEeCC--CCCcCHHHHHHHHhccc---CCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECc
Confidence 999999 999999973 57999999999997621 0123566654 789999999999999999999999999
Q ss_pred cccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc
Q 037144 272 YAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ 351 (502)
Q Consensus 272 ~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 351 (502)
|+.+....... ...+..+|+++++.||+++ |.++|+++++++............+.... .. + ..
T Consensus 158 ~~~g~~~~~~~---~~~~~~~~~~s~s~~K~l~-~~~~G~~~~~~~~l~~~l~~~~~~~~~~~--------~~--~--~~ 221 (394)
T 1o69_A 158 EALGSFYKNKA---LGTFGEFGVYSYNGNKIIT-TSGGGMLIGKNKEKIEKARFYSTQARENC--------LH--Y--EH 221 (394)
T ss_dssp TCTTCEETTEE---TTSSSSEEEEECCTTSSSC-CSSCEEEEESCHHHHHHHHHHTBTCCCSS--------SS--C--CC
T ss_pred CcccceeCCcc---cccccCcEEEEEeCCccCC-CCCceEEEECCHHHHHHHHHHHHhccccC--------cc--c--cc
Confidence 98433332211 1112357899999999876 66789988876554332211111111000 00 0 01
Q ss_pred ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----CeeEEEEEeecCcchhhhhhc
Q 037144 352 ITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR-----NFSLVCFRVTPSAVMDKLRTK 426 (502)
Q Consensus 352 ~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~-----~~~~v~f~~~~~~~~~~~~~~ 426 (502)
.+.+.+++...+.+++.....+.+++.+++..++++++.+.|+++ +++..++ .+.+++|.+.+.... +
T Consensus 222 ~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~ 294 (394)
T 1o69_A 222 LDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNE-----L 294 (394)
T ss_dssp SSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGG-----S
T ss_pred cccCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhc-----c
Confidence 111222223233333322123457788899999999999999887 6665432 122566766431000 0
Q ss_pred ccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee-------eECC----E---------EEEEEEecCCCCcHH
Q 037144 427 YKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA-------IVGG----I---------YVLRFAAGNSMTMES 486 (502)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-------~~~g----~---------~~lR~~~~~~~t~~~ 486 (502)
..+++.......... .+....++.+.|.++|..+.++. .+.. . ..+|+.. ++.++++
T Consensus 295 ~~~~~~~~~~~~~~~--~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~e 371 (394)
T 1o69_A 295 NACQKDINISQKNIT--LHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPS-GTAMSKD 371 (394)
T ss_dssp CCCCEEEECCCCCCC--CCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECC-CTTCCHH
T ss_pred ccccccccccccccc--cccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccC-CCCCCHH
Confidence 000000000000000 00013467777777786432220 1111 0 2455554 5778888
Q ss_pred HHHHHHHHHHHHHH
Q 037144 487 HVRAAWTVVQEHLE 500 (502)
Q Consensus 487 di~~~~~~l~~~~~ 500 (502)
||++++++|+++.+
T Consensus 372 di~~~~~~l~~~~~ 385 (394)
T 1o69_A 372 DVYEISKLILKSIK 385 (394)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
No 126
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.88 E-value=1.5e-22 Score=203.08 Aligned_cols=331 Identities=13% Similarity=0.029 Sum_probs=208.1
Q ss_pred CHHHHHHHHHHhhcCC----CCccccc---ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCc-hHHHHHHHHH
Q 037144 88 SVAGIVGEMLSSGFNV----VGLDWIS---SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTT-CEALLCTLTA 159 (502)
Q Consensus 88 ~~~~~~~~~l~~~~n~----~~~~~~~---~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~gg-t~a~~~al~~ 159 (502)
.+|..+.+.+...+.. ....|.. ++....+..++++++++++|.++.. .+++|+|+ |+|+..++..
T Consensus 13 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~------~v~~~~g~gt~al~~~~~~ 86 (360)
T 1w23_A 13 ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDY------QILFLQGGASLQFTMLPMN 86 (360)
T ss_dssp CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCcchHHHHHHHHH
Confidence 4444555555555532 2223333 6677778888999999999996321 57889888 8988776655
Q ss_pred HHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHH-HHHHHHhcCCccEEEE
Q 037144 160 ARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLS-QINLDVEAELIPLFLC 238 (502)
Q Consensus 160 a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~-~i~~~~~~g~~p~~Vv 238 (502)
.... +.++++|+++...|++... ++.. | +++.+|++++ ++.+|+++|++ +++++ +.+|+
T Consensus 87 l~~~--------~~~g~~vi~~~~~~~~~~~-~~~~--g--~~~~v~~~~~-~~~~d~~~l~~~~i~~~------~k~v~ 146 (360)
T 1w23_A 87 LLTK--------GTIGNYVLTGSWSEKALKE-AKLL--G--ETHIAASTKA-NSYQSIPDFSEFQLNEN------DAYLH 146 (360)
T ss_dssp HCCT--------TCEEEEEECSHHHHHHHHH-HHTT--S--EEEEEEECGG-GTSCSCCCGGGCCCCTT------EEEEE
T ss_pred hcCC--------CCcccEEEecchhHHHHHH-HHHh--C--CeEEeecccc-cCcCCccchHhhccCCC------CCEEE
Confidence 4321 1145678888878877433 3433 4 6888998742 34689999988 77433 45788
Q ss_pred EecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCch
Q 037144 239 ATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPS 318 (502)
Q Consensus 239 ~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~ 318 (502)
+++++|++|.+-| + |+++||+++++|++|+.+....+ . . ..|+++.++||+++ |.|+|++++++..
T Consensus 147 ~~~~~nptG~~~~--~---i~~~~~~~li~D~a~~~~~~~~~-~----~---~~di~~~s~sK~~~-~~G~G~~~~~~~~ 212 (360)
T 1w23_A 147 ITSNNTIYGTQYQ--N---FPEINHAPLIADMSSDILSRPLK-V----N---QFGMIYAGAQKNLG-PSGVTVVIVKKDL 212 (360)
T ss_dssp EESEETTTTEECS--S---CCCCCSSCEEEECTTTTTSSCCC-G----G---GCSEEEEETTTTTS-CTTCEEEEEEHHH
T ss_pred EeCCCCCcceecc--c---ccccCCceEEEechhhcCCCCcC-c----c---cCCEEEEEcccccC-CCCcEEEEEcHHH
Confidence 8899999999854 2 23389999999999987654322 1 1 23899999999887 6689999887542
Q ss_pred hhhhhhcC-CcccccCccCCCCCcccccCCCcccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhc
Q 037144 319 CLLSTLST-NPQYLKNEATDQEPKEQEVGYKDWQITLCRR-FRSLKLWVVIRNFGVA-NLRNFIRSHVGMAKLFERLVTS 395 (502)
Q Consensus 319 ~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~la~~l~~~l~~ 395 (502)
+. .+.. .+.++.... ... ..... ++.. .....+..+++.+..+ +++++.++..++++++.+.|++
T Consensus 213 -~~-~~~~~~~~~~~~~~--------~~~-~~~~~-~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 280 (360)
T 1w23_A 213 -LN-TKVEQVPTMLQYAT--------HIK-SDSLY-NTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDE 280 (360)
T ss_dssp -HC-SCCTTCCGGGCHHH--------HHH-TTTCS-SCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -Hh-hcccCCcchhhhhh--------hhh-ccCCC-CCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 21 1211 111110000 000 00000 0101 1123444556555444 7888999999999999999999
Q ss_pred CCCe-EEecCC--Cee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCE
Q 037144 396 DKRF-EVAFPR--NFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGI 471 (502)
Q Consensus 396 ~~~~-~l~~~~--~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~ 471 (502)
++++ ....++ ..+ +++|.+++ .....++.++|.+.|..+..+. ...
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~l~~~gi~~~~~~--~~~ 330 (360)
T 1w23_A 281 SNGFYVGHAEKGSRSLMNVTFNLRN----------------------------EELNQQFLAKAKEQGFVGLNGH--RSV 330 (360)
T ss_dssp TTTSSEESSCGGGBCSSEEEEECSS----------------------------HHHHHHHHHHHHHTTEESCBCC--TTT
T ss_pred ccCcccccCCchhccCcEEEEEcCC----------------------------CccHHHHHHHHHHCCeeeecCC--CCC
Confidence 8765 654222 344 67776532 1113456777777786542221 123
Q ss_pred EEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 472 YVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 472 ~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.++|++++. .++++++++++++|+++.++
T Consensus 331 ~~iRis~~~-~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 331 GGCRASIYN-AVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp CSEEEECCT-TSCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEecC-CCCHHHHHHHHHHHHHHHhh
Confidence 579999864 45778999999999988654
No 127
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.88 E-value=1.1e-21 Score=199.93 Aligned_cols=287 Identities=14% Similarity=0.151 Sum_probs=191.6
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH--
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA-- 192 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa-- 192 (502)
.....++.+++++++|.+ ..+++++|++|+..++.+... +++.|+++...|.++...+
T Consensus 63 ~~~~~~l~~~la~~~g~~---------~~i~~~sG~~a~~~~l~~~~~-----------~gd~vi~~~~~~~~~~~~~~~ 122 (398)
T 2rfv_A 63 NPTTDALEKKLAVLERGE---------AGLATASGISAITTTLLTLCQ-----------QGDHIVSASAIYGCTHAFLSH 122 (398)
T ss_dssp CHHHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSSCHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCCcccHHHHHHH
Confidence 345566778888998875 257777788999888776632 5678889999999887766
Q ss_pred --HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeec
Q 037144 193 --QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDA 270 (502)
Q Consensus 193 --~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDa 270 (502)
+..|+ +++.+|.+ |+++|+++++++ +.+|+++.++|++|.+.|+++|+++|++||+++|+|+
T Consensus 123 ~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De 186 (398)
T 2rfv_A 123 SMPKFGI---NVRFVDAA-------KPEEIRAAMRPE------TKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDN 186 (398)
T ss_dssp HHHHTTC---EEEEECTT-------SHHHHHHHCCTT------EEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHcCC---EEEEeCCC-------CHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEEC
Confidence 77888 88888863 789999988643 4588889999999999999999999999999999999
Q ss_pred ccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCC
Q 037144 271 AYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYK 348 (502)
Q Consensus 271 A~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 348 (502)
+|+.+....+. .. ++|+++.++||++++|.+ +|+++.++. .+...+.. +....
T Consensus 187 ~~~~~~~~~~~--~~-----~~di~~~s~sK~~~~~g~~~~G~~~~~~~-~~~~~~~~---~~~~~-------------- 241 (398)
T 2rfv_A 187 TFMSPYCQQPL--QL-----GADIVVHSVTKYINGHGDVIGGIIVGKQE-FIDQARFV---GLKDI-------------- 241 (398)
T ss_dssp TTTCTTTCCGG--GG-----TCSEEEEETTTTTTCSSCCCCEEEEECHH-HHHHHHHT---HHHHT--------------
T ss_pred CCcccccCCch--hh-----CCcEEEEeCcccccCCCCceEEEEEECHH-HHHHHHHH---HHHhC--------------
Confidence 99876553221 11 689999999999988876 577777543 22211111 11000
Q ss_pred cccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE--------------ecC---CCeeEEE
Q 037144 349 DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV--------------AFP---RNFSLVC 411 (502)
Q Consensus 349 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l--------------~~~---~~~~~v~ 411 (502)
. +-....+..|++++.+ +.+...+++..++++++.+.|++.+.++- ..+ ...++++
T Consensus 242 ----~-~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~ 314 (398)
T 2rfv_A 242 ----T-GGCMSPFNAWLTLRGV--KTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIIS 314 (398)
T ss_dssp ----T-CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEE
T ss_pred ----C-CCCCCHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEE
Confidence 0 0011345556665554 23445556667777888888877644332 211 2467888
Q ss_pred EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee----------------------EC
Q 037144 412 FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI----------------------VG 469 (502)
Q Consensus 412 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~----------------------~~ 469 (502)
|.+.+. .....++.+++...|.. ++.+. ..
T Consensus 315 ~~~~~~---------------------------~~~~~~l~~~~~~~~i~-~~~G~~~~li~~~~~~~~~~~~~~~~~~~ 366 (398)
T 2rfv_A 315 FEIAGG---------------------------LEAGRRMINSVELCLLA-VSLGDTETLIQHPASMTHSPVAPEERLKA 366 (398)
T ss_dssp EEETTH---------------------------HHHHHHHHTTCSSSEEC-SCCSSSSCEEECHHHHTSSSSCHHHHHHT
T ss_pred EEEcCC---------------------------HHHHHHHHHhCCcceec-cCCCCcceeeecccccccccCCHHHHHhc
Confidence 866421 11233455544333321 11110 01
Q ss_pred C--EEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 470 G--IYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 470 g--~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
| ..++|++++ ..+++++|+++.++|+++
T Consensus 367 g~~~~~iRls~~-~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 367 GITDGLIRLSVG-LEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp TCCTTEEEEECC-SSCHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEec-CCCHHHHHHHHHHHHHhh
Confidence 2 468999997 467788999999999764
No 128
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.88 E-value=3.5e-21 Score=195.80 Aligned_cols=323 Identities=11% Similarity=0.042 Sum_probs=210.3
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCC-CccCcCCCC-cEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLP-KSFLFSGNG-GGVIQGTTCEALLCTLTAARDRVLKK 167 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~-~~~~~~~~~-~g~~t~ggt~a~~~al~~a~~~~~~~ 167 (502)
+..+.+.+...+. ....|....+..++++++.+|+.+.+|.+ ... . ..++|+|+++++..++.+.+.
T Consensus 45 ~~~v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~-----~~~i~~t~g~~~al~~~~~~~~~----- 113 (396)
T 3jtx_A 45 PKVITDALTASLH-ELEKYPLTAGLPELRQACANWLKRRYDGLTVDA-----DNEILPVLGSREALFSFVQTVLN----- 113 (396)
T ss_dssp CHHHHHHHHHTGG-GGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCT-----TTSEEEESSHHHHHHHHHHHHCC-----
T ss_pred CHHHHHHHHHHhh-hccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCC-----CCeEEEcCCcHHHHHHHHHHHhC-----
Confidence 3445556555553 23345444556889999999999999964 111 2 589999999999887776643
Q ss_pred hCccCCCC-----eEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecC
Q 037144 168 IGRENISK-----LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVG 242 (502)
Q Consensus 168 ~~~~~~~~-----~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g 242 (502)
++ +.|+++..+|.++..+++..|. +++.+|++. +++.+|+++|++++++.+ .+|+++.+
T Consensus 114 ------~g~~~~~d~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~-~g~~~d~~~l~~~~~~~~------~~v~l~~p 177 (396)
T 3jtx_A 114 ------PVSDGIKPAIVSPNPFYQIYEGATLLGGG---EIHFANCPA-PSFNPDWRSISEEVWKRT------KLVFVCSP 177 (396)
T ss_dssp ------C---CCCCEEEEEESCCHHHHHHHHHTTC---EEEEEECCT-TTCCCCGGGSCHHHHHTE------EEEEEESS
T ss_pred ------CCCccCCCEEEEcCCCcHhHHHHHHHcCC---EEEEeecCC-CCCccCHHHHHHhhccCc------EEEEEECC
Confidence 32 6888888999999999999999 999999954 346889999999997643 47778899
Q ss_pred CccccccCChhH---HHHHHHHhCCEEEeecccccccccCccchhhhc------CCCCCCeeEEccCCcCCC-CCcceEE
Q 037144 243 TTAITAVDPLKP---LCDVAKQFGIWVHVDAAYAGSACICPEFRHFID------GVECVDSFSFNPHKWLFT-TLDCCCL 312 (502)
Q Consensus 243 tt~~G~idpl~e---I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~------~~~~aDsi~~~~hK~l~~-p~~~g~~ 312 (502)
+|++|.+-|.++ |+++|++||+++++|++|+.+............ .-...+.+..+++|.++. ...+|++
T Consensus 178 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 257 (396)
T 3jtx_A 178 NNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFV 257 (396)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEE
T ss_pred CCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEE
Confidence 999999976555 999999999999999999875443211111110 012556788899997654 4567777
Q ss_pred EeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHH
Q 037144 313 WVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFER 391 (502)
Q Consensus 313 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~ 391 (502)
+. ++.... .+.....+... ....+...++...+ -.+.+.+..++..++++++.+
T Consensus 258 ~~-~~~~~~-~~~~~~~~~~~-----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~ 312 (396)
T 3jtx_A 258 AG-DAELLK-NFLLYRTYHGS-----------------------AMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIP 312 (396)
T ss_dssp EE-CHHHHH-HHHHHHHHHTC-----------------------CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred Ee-CHHHHH-HHHHHHhhccc-----------------------CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 55 443322 22111000000 00222233333322 245678888889999999999
Q ss_pred HHhcCCCeEEecCCCee-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeE-
Q 037144 392 LVTSDKRFEVAFPRNFS-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIV- 468 (502)
Q Consensus 392 ~l~~~~~~~l~~~~~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~- 468 (502)
.|++. +.+. .+..+ ++++.+.... ..++.++|.+ .|..+.++..+
T Consensus 313 ~l~~~--~~~~-~~~~~~~~~~~~~~~~-----------------------------~~~~~~~l~~~~gi~v~~g~~~~ 360 (396)
T 3jtx_A 313 ILQQV--FDVK-LPDASFYIWLKVPDGD-----------------------------DLAFARNLWQKAAIQVLPGRFLA 360 (396)
T ss_dssp HHTTT--SCCC-CCSSSSEEEEECTTSC-----------------------------HHHHHHHHHHHHCEECEEGGGGC
T ss_pred HHHhc--CCcc-CCCeeEEEEEECCCCC-----------------------------HHHHHHHHHHHCCEEEeCChHhC
Confidence 99875 3333 34334 4444443211 2345555543 47654443222
Q ss_pred -------CCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 469 -------GGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 469 -------~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
.+..++|++++. ++++|+++++.|.++.
T Consensus 361 ~~~~~~~~~~~~iRis~~~---~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 361 RDTEQGNPGEGYVRIALVA---DVATCVKAAEDIVSLY 395 (396)
T ss_dssp CCCTTCCTTTTEEEEECCS---CHHHHHHHHHHHHHHC
T ss_pred CcccccCCCCCeEEEEEcC---CHHHHHHHHHHHHHHh
Confidence 235799999863 6789999999998764
No 129
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.88 E-value=8.3e-21 Score=190.58 Aligned_cols=284 Identities=10% Similarity=0.082 Sum_probs=192.6
Q ss_pred HHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHHHHHHcCCCC
Q 037144 121 VMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQKAAQIVGIDR 199 (502)
Q Consensus 121 ~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~aa~~~Glg~ 199 (502)
+++.+++++|.+.+ ..++|+|+++++..++.+..+ ++ +.|+++..+|.++..+++..|.
T Consensus 63 lr~~la~~~~~~~~-------~v~~~~G~~~ai~~~~~~~~~-----------~g~d~Vl~~~p~~~~~~~~~~~~g~-- 122 (356)
T 1fg7_A 63 VIENYAQYAGVKPE-------QVLVSRGADEGIELLIRAFCE-----------PGKDAILYCPPTYGMYSVSAETIGV-- 122 (356)
T ss_dssp HHHHHHHHHTSCGG-------GEEEESHHHHHHHHHHHHHCC-----------TTTCEEEECSSSCTHHHHHHHHHTC--
T ss_pred HHHHHHHHhCCChH-------HEEEcCCHHHHHHHHHHHHhC-----------CCCCEEEEeCCChHHHHHHHHHcCC--
Confidence 44456666687654 589999999999877776542 45 7888999999999999999999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH--hCCEEEeecccccccc
Q 037144 200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGSAC 277 (502)
Q Consensus 200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~--~g~~lhVDaA~g~~~~ 277 (502)
+++.+|.++ ++.+|+++|+++++ + +.+|+++.++|+||.+-|.++|.++++. +|+++++|++|+.+..
T Consensus 123 -~~~~v~~~~--~~~~d~~~l~~~i~-~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~ 192 (356)
T 1fg7_A 123 -ECRTVPTLD--NWQLDLQGISDKLD-G------VKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCP 192 (356)
T ss_dssp -EEEECCCCT--TSCCCHHHHHTSCT-T------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGSG
T ss_pred -EEEEeeCCC--CCCCCHHHHHHHhc-C------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCCEEEEEccchhhcC
Confidence 999999874 57899999998885 2 3478888999999999776655554443 8999999999986541
Q ss_pred cCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC
Q 037144 278 ICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR 356 (502)
Q Consensus 278 ~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr 356 (502)
......... ....+.+..++||+++.| ...|+++++ ++...........|
T Consensus 193 -~~~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~-------------------------- 243 (356)
T 1fg7_A 193 -QASLAGWLA-EYPHLAILRTLSKAFALAGLRCGFTLAN-EEVINLLMKVIAPY-------------------------- 243 (356)
T ss_dssp -GGCSGGGTT-TCTTEEEEEESSSTTCCGGGCCEEEEEC-HHHHHHHHHHSCSS--------------------------
T ss_pred -CCcHHHHHh-hCCCEEEEecchHhhcCchhhhEEEEeC-HHHHHHHHHhcCCC--------------------------
Confidence 111111111 113467788999999743 457888774 43322111111111
Q ss_pred CCCchHHHHHHHHhcHHH---HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcc
Q 037144 357 RFRSLKLWVVIRNFGVAN---LRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYD 433 (502)
Q Consensus 357 ~~~al~~~~~l~~~g~~g---~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 433 (502)
....+..+++...+...+ +++..++..++++++.+.|++++++....++..+++.+++. .
T Consensus 244 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~-~---------------- 306 (356)
T 1fg7_A 244 PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK-A---------------- 306 (356)
T ss_dssp CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET-T----------------
T ss_pred CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC-C----------------
Confidence 013445556666665444 67888889999999999999987654444555666666553 1
Q ss_pred cccccchhHhhHHHHHHHHHHHHhcCcEEEEeee-ECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 434 QYRQFSEEERTNEFNRELLESINVSGKVFMTHAI-VGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 434 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
..++.++|.+.|..+...+. +....++|+++. +++++++++++|+++
T Consensus 307 --------------~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~----~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 307 --------------SSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG----TREESQRVIDALRAE 354 (356)
T ss_dssp --------------HHHHHHHHHHTTEECEECTTSTTCTTEEEEECC----CHHHHHHHHHHHHTC
T ss_pred --------------HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC----CHHHHHHHHHHHHhh
Confidence 23566777677865444122 222348999985 467999999998764
No 130
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.88 E-value=7.1e-22 Score=202.36 Aligned_cols=307 Identities=11% Similarity=0.055 Sum_probs=190.5
Q ss_pred hhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH---
Q 037144 113 AAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ--- 189 (502)
Q Consensus 113 ~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~--- 189 (502)
....+++.+.+++++++|.+.. -+++++|++++..++.+... +++.|+++...|.++.
T Consensus 73 ~~~~~~~~~~~~la~~~~~~~~--------~v~~~sGs~a~~~a~~~~~~-----------~gd~v~~~~~~~~~~~~~~ 133 (420)
T 3gbx_A 73 YVDVVEQLAIDRAKELFGADYA--------NVQPHSGSQANFAVYTALLQ-----------PGDTVLGMNLAQGGHLTHG 133 (420)
T ss_dssp -CHHHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC-----------TTCEEEEEEEC--------
T ss_pred HHHHHHHHHHHHHHHHhCCCCc--------eeEecCcHHHHHHHHHHhcC-----------CCCEEEecchhhcceeccc
Confidence 3456787888999999998653 24456668999887766533 6778888888887743
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEee
Q 037144 190 KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVD 269 (502)
Q Consensus 190 ~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVD 269 (502)
......|.+. ..+.++.+ .++.+|+++|++++++.. +.+|+++.+++ |...|+++|+++|++||+++++|
T Consensus 134 ~~~~~~g~~~-~~~~~~~~--~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l~~l~~l~~~~~~~li~D 203 (420)
T 3gbx_A 134 SPVNFSGKLY-NIVPYGID--ESGKIDYDEMAKLAKEHK-----PKMIIGGFSAY--SGVVDWAKMREIADSIGAYLFVD 203 (420)
T ss_dssp ----CHHHHS-EEEEEEEC--TTCSCCHHHHHHHHHHHC-----CSEEEECCTTC--CSCCCHHHHHHHHHHTTCEEEEE
T ss_pred hhhhhcccce-eEEeccCC--ccCCcCHHHHHHHHHhcC-----CeEEEEecCcc--CCccCHHHHHHHHHHcCCEEEEE
Confidence 2222333310 34455555 357899999999998741 23677766554 56889999999999999999999
Q ss_pred cccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc--hhhhhhhcCCcccccCccCCCCCcccccCC
Q 037144 270 AAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP--SCLLSTLSTNPQYLKNEATDQEPKEQEVGY 347 (502)
Q Consensus 270 aA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~--~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 347 (502)
++|+.+......+.. .+..+|+++.++||++++|.+ |+++.++. ... ..+. .+.....
T Consensus 204 e~~~~~~~~~~~~~~---~~~~~di~~~s~sK~~~g~~g-g~~~~~~~~~~~~-~~~~---~~~~~~~------------ 263 (420)
T 3gbx_A 204 MAHVAGLIAAGVYPN---PVPHAHVVTTTTHKTLAGPRG-GLILAKGGDEELY-KKLN---SAVFPSA------------ 263 (420)
T ss_dssp CTTTHHHHHTTSSCC---STTTSSEEEEESSGGGCSCSC-EEEEESSCCHHHH-HHHH---HHHC---------------
T ss_pred CCcchhceecccCCc---ccccCCEEEeecccCCCCCCc-eEEEEcCCcHHHH-HHhh---hhcCCCC------------
Confidence 998765543222111 123589999999999977764 66666541 222 2211 1111000
Q ss_pred CcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhh
Q 037144 348 KDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRT 425 (502)
Q Consensus 348 ~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~ 425 (502)
.++.. ....++..++.....+++.++.++..++++++.+.|++. +++++.+ ...+++.+.+.+...
T Consensus 264 -----~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~------ 331 (420)
T 3gbx_A 264 -----QGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDLVDKNL------ 331 (420)
T ss_dssp ------CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTC------
T ss_pred -----CCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEcCCCCC------
Confidence 00000 112244445555556778889999999999999999884 8998753 345666666543211
Q ss_pred cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEe------eeECCEEEEEEEecCCC---CcHHHHHHHHHHHH
Q 037144 426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTH------AIVGGIYVLRFAAGNSM---TMESHVRAAWTVVQ 496 (502)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~------~~~~g~~~lR~~~~~~~---t~~~di~~~~~~l~ 496 (502)
....+.+.+.+.|..+... ....+...+|+++.... .++++|+++++.|+
T Consensus 332 ---------------------~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~ 390 (420)
T 3gbx_A 332 ---------------------TGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMC 390 (420)
T ss_dssp ---------------------CHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHH
T ss_pred ---------------------CHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHH
Confidence 0234555666668654431 11122345999985332 34789999999998
Q ss_pred HHHHh
Q 037144 497 EHLEA 501 (502)
Q Consensus 497 ~~~~~ 501 (502)
++.++
T Consensus 391 ~~l~~ 395 (420)
T 3gbx_A 391 DVLDN 395 (420)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 87653
No 131
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.88 E-value=2.8e-21 Score=194.18 Aligned_cols=308 Identities=11% Similarity=0.067 Sum_probs=202.6
Q ss_pred HHHHHHHHHhhcCCC---CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144 90 AGIVGEMLSSGFNVV---GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK 166 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~ 166 (502)
+..+.+.+...+... ...|.. +...+ +++++++++|.+.+ ..++|+||++|+..++.+...
T Consensus 41 ~~~v~~a~~~~~~~~~~~~~~y~~-~~~~~----lr~~la~~~g~~~~-------~i~~t~g~~~al~~~~~~l~~---- 104 (360)
T 3hdo_A 41 SPEVVKAILEELGPDGAALRIYPS-ASSQK----LREVAGELYGFDPS-------WIIMANGSDEVLNNLIRAFAA---- 104 (360)
T ss_dssp CHHHHHHHHHHHTTTCGGGGSCCC-SSCHH----HHHHHHHHHTCCGG-------GEEEESSHHHHHHHHHHHHCC----
T ss_pred CHHHHHHHHHHHhcccchhhcCCC-CchHH----HHHHHHHHhCcCcc-------eEEEcCCHHHHHHHHHHHHhC----
Confidence 344555555555443 223322 23334 45556777787554 689999999999887776532
Q ss_pred HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144 167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246 (502)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~ 246 (502)
+++.|+++..+|.++...++..|. +++.+|++. ++.+ +++++++ .+.+|+++.++|++
T Consensus 105 -------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~--~~~~--~~l~~~~--------~~~~v~i~~p~npt 162 (360)
T 3hdo_A 105 -------EGEEIGYVHPSYSYYGTLAEVQGA---RVRTFGLTG--DFRI--AGFPERY--------EGKVFFLTTPNAPL 162 (360)
T ss_dssp -------TTCEEEEESSSCTHHHHHHHHHTC---EEEEECBCT--TSSB--TTCCSSB--------CSSEEEEESSCTTT
T ss_pred -------CCCEEEEcCCChHHHHHHHHHCCC---EEEEeeCCC--CCCH--HHHHhhc--------CCCEEEEeCCCCCC
Confidence 567888899999999999999999 999999975 3455 4443322 12378888899999
Q ss_pred cccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhc
Q 037144 247 TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLS 325 (502)
Q Consensus 247 G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~ 325 (502)
|.+-|+++|.++|+++|+++++|++|+.+.- ........ ....+.++.++||+++ .+.+.|+++. ++........
T Consensus 163 G~~~~~~~l~~l~~~~~~~li~De~~~~~~~--~~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~ 238 (360)
T 3hdo_A 163 GPSFPLEYIDELARRCAGMLVLDETYAEFAE--SNALELVR-RHENVVVTRTLSKSYSLAGMRIGLAIA-RPEVIAALDK 238 (360)
T ss_dssp CCCCCHHHHHHHHHHBSSEEEEECTTGGGSS--CCCTHHHH-HCSSEEEEEESTTTTSCTTSCCEEEEC-CHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHCCCEEEEECChHhhCC--cchhHHhc-cCCCEEEEecchHhhcCCccceeeEee-CHHHHHHHHH
Confidence 9999999999999999999999999986421 11111111 1134466779999986 4456787776 4433221111
Q ss_pred CCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 037144 326 TNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP 404 (502)
Q Consensus 326 ~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~ 404 (502)
....| ....+..+++...+ ..+.+.++.++..++++++.+.|++. ++++. +
T Consensus 239 ~~~~~--------------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~ 290 (360)
T 3hdo_A 239 IRDHY--------------------------NLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI-GYDVI-P 290 (360)
T ss_dssp HSCSC--------------------------CSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEC-C
T ss_pred hCCCC--------------------------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEc-C
Confidence 11000 01223333333333 24567888999999999999999998 88875 5
Q ss_pred CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCc
Q 037144 405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTM 484 (502)
Q Consensus 405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~ 484 (502)
+..+++.+...... ..++.+.|.++|..+.......+..++|++++ +
T Consensus 291 ~~~~~~~~~~~~~~-----------------------------~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~----~ 337 (360)
T 3hdo_A 291 SQGNYLFATPPDRD-----------------------------GKRVYDGLYARKVLVRHFSDPLLAHGMRISIG----T 337 (360)
T ss_dssp CSSSEEEEECTTCC-----------------------------HHHHHHHHHHTTEECBCCCSTTTTTSEEEECC----C
T ss_pred CCccEEEEECCCCC-----------------------------HHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC----C
Confidence 56666666543211 24566777777865433222233578999975 6
Q ss_pred HHHHHHHHHHHHHHHH
Q 037144 485 ESHVRAAWTVVQEHLE 500 (502)
Q Consensus 485 ~~di~~~~~~l~~~~~ 500 (502)
++++++++++|+++.+
T Consensus 338 ~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 338 REEMEQTLAALKEIGE 353 (360)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhc
Confidence 6799999999998765
No 132
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.88 E-value=3.6e-21 Score=198.17 Aligned_cols=314 Identities=8% Similarity=0.031 Sum_probs=208.4
Q ss_pred cccccChhhHHHHHHHHHHHHHhc-CCCCccCcCCCCc---EEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeC
Q 037144 106 LDWISSPAAVELENIVMDWLGQML-DLPKSFLFSGNGG---GVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS 181 (502)
Q Consensus 106 ~~~~~~p~~~~le~~~~~~l~~l~-g~~~~~~~~~~~~---g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s 181 (502)
..|....+..++++.+.+++.+.. +.+.+ . .++|+||++|+..++.+..+ +++.|+++
T Consensus 82 ~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-------~~~~i~~t~g~~~al~~~~~~l~~-----------~gd~Vl~~ 143 (430)
T 2x5f_A 82 FPYAPPQGIEELRDLWQQKMLRDNPELSID-------NMSRPIVTNALTHGLSLVGDLFVN-----------QDDTILLP 143 (430)
T ss_dssp SSCCCTTCCHHHHHHHHHHHHHHCTTCCGG-------GBCCCEEESHHHHHHHHHHHHHCC-----------TTCEEEEE
T ss_pred cccCCCCCCHHHHHHHHHHHhccCcccCCC-------ccceEEEcCCchHHHHHHHHHHhC-----------CCCEEEEc
Confidence 345544467889999888887764 33322 5 79999999999888776543 56788888
Q ss_pred CCCchhHHHHHHH-cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHH
Q 037144 182 DQTHCAFQKAAQI-VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCD 257 (502)
Q Consensus 182 ~~~H~s~~~aa~~-~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~ 257 (502)
..+|.++...++. .|. +++.+|+++.+ +.+|+++|++++++. +..+.+|+++.++|++|.+-| +++|++
T Consensus 144 ~p~y~~~~~~~~~~~g~---~~~~~~~~~~~-~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~ 216 (430)
T 2x5f_A 144 EHNWGNYKLVFNTRNGA---NLQTYPIFDKD-GHYTTDSLVEALQSY---NKDKVIMILNYPNNPTGYTPTHKEVTTIVE 216 (430)
T ss_dssp SSCCTHHHHHHTTTTCC---EEEEECCBCTT-SCBCSHHHHHHHHHC---CSSEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred CCcCccHHHHHHHhcCC---eEEEEeccCcc-CCcCHHHHHHHHHhc---CCCCEEEEEcCCCCCCCCcCCHHHHHHHHH
Confidence 9999999999998 899 99999987532 689999999999752 122457788889999999988 899999
Q ss_pred HHHH-----hCCEEEeecccccccccCccchh---hhcCCCCC---CeeEEccCCcCCCC-CcceEEEe--eCchhhhhh
Q 037144 258 VAKQ-----FGIWVHVDAAYAGSACICPEFRH---FIDGVECV---DSFSFNPHKWLFTT-LDCCCLWV--KDPSCLLST 323 (502)
Q Consensus 258 i~~~-----~g~~lhVDaA~g~~~~~~~~~~~---~~~~~~~a---Dsi~~~~hK~l~~p-~~~g~~~~--r~~~~l~~~ 323 (502)
+|++ ||+++++|++|+.+......... .+.+.... +.+..++||+++.| ..+|++++ +++.... .
T Consensus 217 ~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~-~ 295 (430)
T 2x5f_A 217 AIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKE-V 295 (430)
T ss_dssp HHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHH-H
T ss_pred HHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHH-H
Confidence 9999 99999999999876543211111 12222233 56678899999744 44788887 2443322 2
Q ss_pred hcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-----HHHHHHHHHHHHHHHHHHHHHHh----
Q 037144 324 LSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-----VANLRNFIRSHVGMAKLFERLVT---- 394 (502)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-----~~g~~~~~~~~~~la~~l~~~l~---- 394 (502)
+........... .-....+..+++...+. .+.++++.+++.++++++.+.|+
T Consensus 296 l~~~~~~~~~~~-------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 356 (430)
T 2x5f_A 296 LEAKVKGLIRSN-------------------ISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQY 356 (430)
T ss_dssp HHHHHHHHHHTT-------------------TSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGG
T ss_pred HHHHHhhhhhcc-------------------cCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 211100000000 00012333333333332 12233477888889999999998
Q ss_pred cCCCeEEecCCCeeE-EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeECCEE
Q 037144 395 SDKRFEVAFPRNFSL-VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINV-SGKVFMTHAIVGGIY 472 (502)
Q Consensus 395 ~~~~~~l~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~ 472 (502)
+. ++++. ++..++ +++.+.+.. ..++.++|.+ .|..+.++ +..
T Consensus 357 ~~-g~~~~-~~~~g~~~~~~~~~~~-----------------------------~~~~~~~l~~~~gi~v~~g----~~~ 401 (430)
T 2x5f_A 357 HS-HWQAY-DFNSGYFMAIKVHDVD-----------------------------PEALRKHLIDKYSIGVIAL----NAT 401 (430)
T ss_dssp TT-TEEEC-CCCBSSEEEEEESSSC-----------------------------HHHHHHHHHHHHCEECEEC----SSS
T ss_pred CC-Cceee-CCCceEEEEeCCCCCC-----------------------------HHHHHHHHHHhCCEEEecC----CCC
Confidence 55 78876 455554 555554110 2356666666 68654332 456
Q ss_pred EEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 473 VLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 473 ~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
++|++++. +++++|+++++.|+++.++
T Consensus 402 ~iRis~~~--~~~e~i~~~~~~l~~~l~~ 428 (430)
T 2x5f_A 402 DIRIAFSC--VEKDDIPHVFDSIAKAIDD 428 (430)
T ss_dssp EEEEEGGG--SCGGGHHHHHHHHHHHHHH
T ss_pred eEEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 89999873 4677999999999988764
No 133
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.88 E-value=3.2e-21 Score=196.60 Aligned_cols=216 Identities=11% Similarity=0.085 Sum_probs=153.9
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH----
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA---- 192 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa---- 192 (502)
...++.+.+++++|.+ ..+++++|++|+..++.+... +++.|+++...|.++...+
T Consensus 66 ~~~~l~~~la~~~g~~---------~~i~~~sG~~a~~~~l~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~ 125 (398)
T 1gc0_A 66 TLNLLEARMASLEGGE---------AGLALASGMGAITSTLWTLLR-----------PGDEVLLGNTLYGCTFAFLHHGI 125 (398)
T ss_dssp HHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSCCSHHHHHHHHTG
T ss_pred HHHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhc-----------CCCEEEEeCCCchhHHHHHHHHH
Confidence 3445556677888875 257777789999888876632 5678888999999887765
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
...|+ +++.++.+ |+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|++||+++|+|++|
T Consensus 126 ~~~g~---~~~~~~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~ 189 (398)
T 1gc0_A 126 GEFGV---KLRHVDMA-------DLQALEAAMTPA------TRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTY 189 (398)
T ss_dssp GGGTC---EEEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTT
T ss_pred HHcCC---EEEEECCC-------CHHHHHHhcCCC------CeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCC
Confidence 56687 88888752 789999988653 458888999999999999999999999999999999999
Q ss_pred ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcc
Q 037144 273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDW 350 (502)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 350 (502)
+.+....+. . .++|+++.++||++++|.+ +|+++.++.. +...+.....++..
T Consensus 190 ~~~~~~~~~-~------~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~-~~~~~~~~~~~~~~----------------- 244 (398)
T 1gc0_A 190 CTPYLQRPL-E------LGADLVVHSATKYLSGHGDITAGIVVGSQAL-VDRIRLQGLKDMTG----------------- 244 (398)
T ss_dssp THHHHCCGG-G------GTCSEEEEETTTTTTCSSSCCCEEEEECHHH-HHHHHHTHHHHHTC-----------------
T ss_pred cccccCCch-h------hCceEEEECCccccCCCCCCeEEEEEEChHH-HHHHHHHHhhccCC-----------------
Confidence 877654331 1 1689999999999998876 5777765432 22112111111000
Q ss_pred cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144 351 QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFE 400 (502)
Q Consensus 351 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~ 400 (502)
-....+..|++++.+ +.+..++++..++++++.+.|+++|+++
T Consensus 245 -----~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~v~ 287 (398)
T 1gc0_A 245 -----AVLSPHDAALLMRGI--KTLNLRMDRHCANAQVLAEFLARQPQVE 287 (398)
T ss_dssp -----CCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred -----CCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHhcCCCee
Confidence 011345566665544 4456777888888888888888876554
No 134
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.87 E-value=1.4e-21 Score=195.21 Aligned_cols=317 Identities=15% Similarity=0.138 Sum_probs=192.6
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCcc
Q 037144 92 IVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRE 171 (502)
Q Consensus 92 ~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~ 171 (502)
.+.+.+...... ...|...+...+++ +++++++|.+ ..++++|||+|+..++.+..+
T Consensus 19 ~~~~a~~~~~~~-~~~y~~~~~~~~l~----~~la~~~g~~---------~~~~~~~gt~a~~~~~~~~~~--------- 75 (347)
T 1jg8_A 19 EMRKAMAQAEVG-DDVYGEDPTINELE----RLAAETFGKE---------AALFVPSGTMGNQVSIMAHTQ--------- 75 (347)
T ss_dssp HHHHHHHTCCCC-CGGGTCCHHHHHHH----HHHHHHHTCS---------EEEEESCHHHHHHHHHHHHCC---------
T ss_pred HHHHHHhcCCCC-CcccCCChHHHHHH----HHHHHHhCCc---------eEEEecCcHHHHHHHHHHhcC---------
Confidence 344555443321 22455556555555 5577777764 368889999999877755432
Q ss_pred CCCCeEEEeCCCCchhHHH---HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc-c
Q 037144 172 NISKLVVYSSDQTHCAFQK---AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI-T 247 (502)
Q Consensus 172 ~~~~~~v~~s~~~H~s~~~---aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~-G 247 (502)
+++.|+++..+|.+... .+...|+ +++.+ .++ ++.+|+++|+++|++....+.++.+|+++.++|++ |
T Consensus 76 --~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v-~~~--~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G 147 (347)
T 1jg8_A 76 --RGDEVILEADSHIFWYEVGAMAVLSGV---MPHPV-PGK--NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGG 147 (347)
T ss_dssp --TTCEEEEETTCHHHHSSTTHHHHHTCC---EEEEE-CEE--TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTS
T ss_pred --CCCEEEEcCcchhhhccccchhhccCe---EEEEe-cCC--CCccCHHHHHHHhccccccccCceEEEEeccccccCC
Confidence 67788889999987543 5677888 88888 432 46799999999886411011135578889999999 9
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeeccccccccc--CccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhh
Q 037144 248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACI--CPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLS 322 (502)
Q Consensus 248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~--~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~ 322 (502)
.+-| +++|+++|++||+++|+|+||.-+... ........ ..+|++++++||+++.| .|++++.++.....
T Consensus 148 ~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~l~~~--~G~~~~~~~~~~~~ 222 (347)
T 1jg8_A 148 RVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYA---GYADSVMFCLSKGLCAP--VGSVVVGDRDFIER 222 (347)
T ss_dssp BCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHH---HTCSEEEEESSSTTCCS--SCEEEEECHHHHHH
T ss_pred ccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhc---ccccEEEEecccccCCC--ceEEEEcCHHHHHH
Confidence 9865 578899999999999999987421111 01111111 26889999999999877 45445555543322
Q ss_pred hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
..... .+... +-+..++..+.+...+ +...+.+++..++++++.+.|+++ ++++.
T Consensus 223 ~~~~~-~~~~~---------------------~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~ 277 (347)
T 1jg8_A 223 ARKAR-KMLGG---------------------GMRQAGVLAAAGIIAL--TKMVDRLKEDHENARFLALKLKEI-GYSVN 277 (347)
T ss_dssp HHHHH-HHHTC---------------------CCSSTHHHHHHHHHHH--HHSSTTHHHHHHHHHHHHHHHHHH-TCBCC
T ss_pred HHHHH-HHcCC---------------------chhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhc-Cceec
Confidence 11100 01100 0001122222222222 111122344456778888888887 77653
Q ss_pred -cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCC
Q 037144 403 -FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNS 481 (502)
Q Consensus 403 -~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~ 481 (502)
.++..+++++.++..+. + ..++.++|.++|..+.... ..++|+++. .
T Consensus 278 ~~~~~~~~~~~~~~~~~~-------------------------~--~~~~~~~l~~~gi~v~~~~----~~~iRl~~~-~ 325 (347)
T 1jg8_A 278 PEDVKTNMVILRTDNLKV-------------------------N--AHGFIEALRNSGVLANAVS----DTEIRLVTH-K 325 (347)
T ss_dssp GGGCCSSEEEEECTTSSS-------------------------C--HHHHHHHHHHHTEECEEEE----TTEEEEECC-T
T ss_pred cCCCcceEEEEEcccccC-------------------------C--HHHHHHHHHHCCCEEecCC----CCeEEEEeC-C
Confidence 24556677776642110 0 2356666766786543321 347999974 4
Q ss_pred CCcHHHHHHHHHHHHHHHHh
Q 037144 482 MTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 482 ~t~~~di~~~~~~l~~~~~~ 501 (502)
.+++++++++++.|+++.++
T Consensus 326 ~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 326 DVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp TSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 56788999999999988754
No 135
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.87 E-value=7.3e-21 Score=195.09 Aligned_cols=332 Identities=9% Similarity=-0.006 Sum_probs=212.8
Q ss_pred CHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144 88 SVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK 167 (502)
Q Consensus 88 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~ 167 (502)
.++..+.+.+..........|....+..++++.+.+|+....+.+.. ..+++|+||++|+..++.+..+
T Consensus 56 ~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~------~~i~~t~g~~~al~~~~~~l~~----- 124 (418)
T 3rq1_A 56 VFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGH------IRSIATAGGTGGIHHLIHNYTE----- 124 (418)
T ss_dssp CCCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSE------EEEEEESHHHHHHHHHHHHHSC-----
T ss_pred cccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCcccc------ccEEECCchHHHHHHHHHHhcC-----
Confidence 34444566665544333345655566788999999999887764321 1589999999999888776543
Q ss_pred hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecC-Cccc
Q 037144 168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVG-TTAI 246 (502)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g-tt~~ 246 (502)
+++.|+++..+|.++...++..|. +++.+|++++ ++.+|+++|++++++..... ...+|+++.+ +|++
T Consensus 125 ------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~~-~~~~vi~~~p~~NPt 193 (418)
T 3rq1_A 125 ------PGDEVLTADWYWGAYRVICSDTGR---TLVTYSLFDE-HNNFNHEAFQNRVNELAAKQ-TNVVVIFNTPGNNPT 193 (418)
T ss_dssp ------TTCEEEEESSCCTHHHHHHHHTTC---EEEEECSBCT-TSSBCHHHHHHHHHHHHHHC-SEEEEEEECSSCTTT
T ss_pred ------CCCEEEECCCCchhHHHHHHHcCC---EEEEEeeeCC-CCCcCHHHHHHHHHHhhccC-CCEEEEEeCCCCCCC
Confidence 677889999999999999999999 9999998643 47899999999998642211 1236777778 8999
Q ss_pred cccCChhHHH---HHHH------HhCCEEEeecccccccccCccchhh---hcCCCCCC---eeEEccCCcCCC-CCcce
Q 037144 247 TAVDPLKPLC---DVAK------QFGIWVHVDAAYAGSACICPEFRHF---IDGVECVD---SFSFNPHKWLFT-TLDCC 310 (502)
Q Consensus 247 G~idpl~eI~---~i~~------~~g~~lhVDaA~g~~~~~~~~~~~~---~~~~~~aD---si~~~~hK~l~~-p~~~g 310 (502)
|.+-|.+++. ++|+ +||+++++|.+|.++.......... ..++ ..| .++.+++|.++. ....|
T Consensus 194 G~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G 272 (418)
T 3rq1_A 194 GYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHL-PKEILTCVCYSLSKGFTMYGQRVG 272 (418)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTC-CTTEEEEEEEESTTTTTCCSSCCE
T ss_pred CCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhc-CCCceEEEEEeCCCCCcCcCCcce
Confidence 9998766555 5555 8999999999997655321111111 1111 123 556789999874 45678
Q ss_pred EEEe--eCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH--------HHHHHHHH
Q 037144 311 CLWV--KDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV--------ANLRNFIR 380 (502)
Q Consensus 311 ~~~~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~--------~g~~~~~~ 380 (502)
+++. +++.... .+.....+..... . .....+...++...+.. +...++.+
T Consensus 273 ~~~~~~~~~~~~~-~~~~~~~~~~~~~------------------~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 332 (418)
T 3rq1_A 273 AMIGISDDEEIAD-EFFEVNKSTSRAT------------------W-SNICRPAMRTMANIVADPAKFKEYEAERNCYYQ 332 (418)
T ss_dssp EEEEEESSHHHHH-HHHHHHHHHHHHH------------------T-SSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHH-HHHHHHHHHHhhc------------------c-CCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 7766 2444332 2211111110000 0 00123333344433322 12335567
Q ss_pred HHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCc
Q 037144 381 SHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGK 460 (502)
Q Consensus 381 ~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 460 (502)
++.++++++.+.|+++ |+++. ++..+++.|...+. ..++.+.|.+.|.
T Consensus 333 ~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~------------------------------~~~~~~~l~~~gi 380 (418)
T 3rq1_A 333 LIRDRADIFKQEAAQV-GLPML-PYRGGFFITIPTDS------------------------------ANAICEELKKEHI 380 (418)
T ss_dssp HHHHHHHHHHHHHHHH-TCCCC-CCCSSSEEEEECTT------------------------------HHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHHhc-CCCCC-CCCceEEEEcCCCC------------------------------HHHHHHHHHhCCE
Confidence 7888889999999887 77765 45555555432221 2345666666786
Q ss_pred EEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 461 VFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 461 ~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.+.++ ..++|++++ ..++++|+++++.|+++.++
T Consensus 381 ~v~~g-----~~~iRis~~--~~~~~~i~~~~~~l~~~l~~ 414 (418)
T 3rq1_A 381 YVIAL-----ANGIRIAAC--GIPKCQMTGLAEKIYNAMKS 414 (418)
T ss_dssp ECEEC-----SSEEEEEGG--GSCHHHHTTHHHHHHHHHHH
T ss_pred EEecC-----CCCeEEEEe--cCCHHHHHHHHHHHHHHHHH
Confidence 54332 357999976 24677999999999998765
No 136
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.87 E-value=2.5e-20 Score=191.60 Aligned_cols=323 Identities=13% Similarity=0.061 Sum_probs=204.5
Q ss_pred HHHHHHHHHhhcCCCCccccc-ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 90 AGIVGEMLSSGFNVVGLDWIS-SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~-~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
|..+.+.+...+... .|.. ++...++++. +++++|.+ .+++|+|||+|+..++.+..
T Consensus 31 p~~~~~a~~~~~~~~--~y~~~~~~~~~l~~~----la~~~~~~---------~v~~~~ggt~al~~~l~~l~------- 88 (424)
T 2po3_A 31 RARLYERLDRALDSQ--WLSNGGPLVREFEER----VAGLAGVR---------HAVATCNATAGLQLLAHAAG------- 88 (424)
T ss_dssp HHHHHHHHHHHHHHT--CCSSSCHHHHHHHHH----HHHHHTSS---------EEEEESCHHHHHHHHHHHHT-------
T ss_pred hHHHHHHHHHHHhcC--CcccCCHHHHHHHHH----HHHHhCCC---------eEEEeCCHHHHHHHHHHHcC-------
Confidence 444555565555432 2443 4555666655 55555653 47999999999988877652
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|+++..+|.++..+++..|+ +++.+|++++ ++.+|+++|+++++++ +.+|+++. ++|.
T Consensus 89 -----~gd~Vlv~~~~~~~~~~~~~~~G~---~~~~v~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~~---~tG~ 150 (424)
T 2po3_A 89 -----LTGEVIMPSMTFAATPHALRWIGL---TPVFADIDPD-TGNLDPDQVAAAVTPR------TSAVVGVH---LWGR 150 (424)
T ss_dssp -----CCSEEEEESSSCTHHHHHHHHTTC---EEEEECBCTT-TSSBCHHHHGGGCCTT------EEEEEEEC---GGGC
T ss_pred -----CCCEEEECCCccHHHHHHHHHcCC---EEEEEecCCC-cCCcCHHHHHHhhCcC------CcEEEEEC---CCCC
Confidence 346788899999999999999999 9999999853 5789999999988643 33565543 7899
Q ss_pred cCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccC--CcCCCCCcceEEEeeCchhhhhhhcC
Q 037144 249 VDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPH--KWLFTTLDCCCLWVKDPSCLLSTLST 326 (502)
Q Consensus 249 idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~h--K~l~~p~~~g~~~~r~~~~l~~~~~~ 326 (502)
..++++|.++|+++|+++++|++|+.+..... .. +. ...|.++.++| |+++. ...|+++.+++.........
T Consensus 151 ~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~--~~-~~--~~~di~~~S~sk~K~l~~-~~~G~~v~~~~~l~~~l~~~ 224 (424)
T 2po3_A 151 PCAADQLRKVADEHGLRLYFDAAHALGCAVDG--RP-AG--SLGDAEVFSFHATKAVNA-FEGGAVVTDDADLAARIRAL 224 (424)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTCTTCEETT--EE-TT--SSSSEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCEEEEECccccCCeECC--ee-cc--cccCEEEEeCCCCCCccC-CCCeEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999984332211 11 11 12477777776 87765 55677666545433221110
Q ss_pred CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 037144 327 NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN 406 (502)
Q Consensus 327 ~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~ 406 (502)
..+.... .+... ......+...+..+.++.. .++++++.++..++++++.+.|+++|++++..++.
T Consensus 225 -~~~~~~~---------~~~~~--~~g~~~~~~~~~aa~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 290 (424)
T 2po3_A 225 -HNFGFDL---------PGGSP--AGGTNAKMSEAAAAMGLTS--LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDR 290 (424)
T ss_dssp -HBTTTTC---------TTCCT--TCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGG
T ss_pred -HhcCccc---------ccccc--ccCcCCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCC
Confidence 0000000 00000 1111223344555555543 46678888999999999999999988999875332
Q ss_pred -----eeEEEEEeecC--cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee--EC------C-
Q 037144 407 -----FSLVCFRVTPS--AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI--VG------G- 470 (502)
Q Consensus 407 -----~~~v~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~------g- 470 (502)
+.++.+.+.+. +. ...++.+.|.+.|..+..... .. +
T Consensus 291 ~~~~~~~~~~i~~~~~~~~~---------------------------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~ 343 (424)
T 2po3_A 291 HGLNNHQYVIVEIDEATTGI---------------------------HRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQ 343 (424)
T ss_dssp GSCCCCCCEEEEECHHHHSS---------------------------CHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTS
T ss_pred CCccccEEEEEEECCccchh---------------------------hHHHHHHHHHHCCCceecccCCccccchhhhhc
Confidence 23455555320 00 023566677777864322100 00 0
Q ss_pred -----EE-------EEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 471 -----IY-------VLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 471 -----~~-------~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
.. .+|+++ +..++++||++++++|+++.+
T Consensus 344 g~~~~~~~~r~~~~~l~l~~-~~~~t~e~i~~~~~~L~~~~~ 384 (424)
T 2po3_A 344 PHAPLPHTERLAARVLSLPT-GTAIGDDDIRRVADLLRLCAT 384 (424)
T ss_dssp CCCCCHHHHHHHTTEEEECC-STTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCChhHHHHhcCEEEeeC-CCCCCHHHHHHHHHHHHHHHh
Confidence 01 277764 456788899999999988764
No 137
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.87 E-value=7.6e-21 Score=193.42 Aligned_cols=216 Identities=13% Similarity=0.092 Sum_probs=158.7
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH----H
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA----Q 193 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa----~ 193 (502)
..++.+.+++++|.+ ..++++||++|+..++.+... +++.|+++...|.+....+ +
T Consensus 68 ~~~l~~~la~~~g~~---------~~~~~~sGt~A~~~al~~~~~-----------~gd~Vi~~~~~y~~~~~~~~~~~~ 127 (392)
T 3qhx_A 68 RTALEAALAAVEDAA---------FGRAFSSGMAAADCALRAMLR-----------PGDHVVIPDDAYGGTFRLIDKVFT 127 (392)
T ss_dssp HHHHHHHHHHHTTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCcchHHHHHHHHHH
Confidence 334556678888875 368899999999888876532 5678889999998776665 5
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccc
Q 037144 194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 273 (502)
Q Consensus 194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g 273 (502)
..|+ +++.+|.+ |+++|+++|+++ +.+|++..++|++|.+.|+++|+++|++||+++|+|++|+
T Consensus 128 ~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~ 191 (392)
T 3qhx_A 128 GWNV---EYTPVALA-------DLDAVRAAIRPT------TRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFA 191 (392)
T ss_dssp GGTC---EEEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTT
T ss_pred hcCc---EEEEeCCC-------CHHHHHHhhCCC------CeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCc
Confidence 5688 88888864 899999998754 3478889999999999999999999999999999999997
Q ss_pred cccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc
Q 037144 274 GSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ 351 (502)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 351 (502)
.+....+ . .. ++|.++.++||+++.+.+ +|+++.+++.... .+......
T Consensus 192 ~~~~~~~-~-~~-----~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~-~l~~~~~~--------------------- 242 (392)
T 3qhx_A 192 SPALQQP-L-SL-----GADVVLHSTTKYIGGHSDVVGGALVTNDEELDQ-SFAFLQNG--------------------- 242 (392)
T ss_dssp CTTTCCG-G-GG-----TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHH-HHHHHHHH---------------------
T ss_pred ccccCCh-H-Hh-----CCcEEEEcCccccCCCCCceEEEEEECcHHHHH-HHHHHHHh---------------------
Confidence 6543222 1 11 789999999999987643 6777776544332 11110000
Q ss_pred ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 352 ITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 352 ~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
.+....++..|.+++.+ +.+..++++..++++++.+.|++.|.+.-+
T Consensus 243 --~g~~~~~~~~~~~~~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v 289 (392)
T 3qhx_A 243 --AGAVPGPFDAYLTMRGL--KTLVLRMQRHSENAAAVAEFLAEHPAISTV 289 (392)
T ss_dssp --HCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred --cCCCCCHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHhcCCCcceE
Confidence 11122456667666644 446677888899999999999999888654
No 138
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.87 E-value=1.1e-21 Score=200.51 Aligned_cols=343 Identities=12% Similarity=0.012 Sum_probs=216.5
Q ss_pred HHHHHHHHHHhhcCCC-CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH
Q 037144 89 VAGIVGEMLSSGFNVV-GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK 167 (502)
Q Consensus 89 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~ 167 (502)
++..+.+.+...+... ...|....+..++++.+.+++.+.+|.+... ....++|+||++++..++.+...
T Consensus 37 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~----~~~i~~~~g~~~a~~~~~~~~~~----- 107 (410)
T 3e2y_A 37 PPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDP----NEEILVAVGAYGSLFNSIQGLVD----- 107 (410)
T ss_dssp CCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCT----TTSEEEESHHHHHHHHHHHHHCC-----
T ss_pred CCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCcHHHHHHHHHHhcC-----
Confidence 3455566666555432 2345554557889999999999998874321 01689999999999888776643
Q ss_pred hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC---------CCCcccCHHHHHHHHHHHHhcCCccEEEE
Q 037144 168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK---------SSSYGLSAESVLSQINLDVEAELIPLFLC 238 (502)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~---------~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv 238 (502)
+++.|+++...|.++...++..|. +++.+|+++ ..++.+|+++|+++++++ +.+|+
T Consensus 108 ------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~------~~~v~ 172 (410)
T 3e2y_A 108 ------PGDEVIIMVPFYDCYEPMVRMAGA---VPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSK------TKAII 172 (410)
T ss_dssp ------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTT------EEEEE
T ss_pred ------CCCEEEEeCCCchhhHHHHHHcCC---EEEEEeccccccccccccccCCcCCHHHHHhhcCCC------ceEEE
Confidence 567788888899999999999999 999999862 135679999999988543 44788
Q ss_pred EecCCcccccc---CChhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCC-CCCcceEE
Q 037144 239 ATVGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLF-TTLDCCCL 312 (502)
Q Consensus 239 ~t~gtt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~ 312 (502)
++.++|++|.+ +++++|+++|++||+++++|++|+.+.......... +......+.+..+++|+++ ....+|++
T Consensus 173 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~ 252 (410)
T 3e2y_A 173 LNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWS 252 (410)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEE
T ss_pred EeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEE
Confidence 88999999999 689999999999999999999998655422111111 1111123366778999997 44667887
Q ss_pred EeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHH------hcHHHHHHHHHHHHHHH
Q 037144 313 WVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRN------FGVANLRNFIRSHVGMA 386 (502)
Q Consensus 313 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~------~g~~g~~~~~~~~~~la 386 (502)
+.++. .+. .+........ + .........+..+++. ...+.++++.++..+++
T Consensus 253 ~~~~~-~~~-~~~~~~~~~~-----------------~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (410)
T 3e2y_A 253 IGPAH-LIK-HLQTVQQNSF-----------------Y---TCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKR 310 (410)
T ss_dssp ECCHH-HHH-HHHHHHHTTT-----------------C---CCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHH
T ss_pred EECHH-HHH-HHHHHHHhhc-----------------c---CCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHH
Confidence 76433 222 1211000000 0 0000111222233331 12456788889999999
Q ss_pred HHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEe
Q 037144 387 KLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTH 465 (502)
Q Consensus 387 ~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~ 465 (502)
+++.+.|+++ ++++..+....++.+.+...... .+. ...... . ..++.+++. +.|..+.++
T Consensus 311 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-----------~~~--~~~~~~--~--~~~~~~~ll~~~gv~v~~g 372 (410)
T 3e2y_A 311 DRMVRLLNSV-GLKPIVPDGGYFIIADVSSLGAD-----------LSD--MNSDEP--Y--DYKFVKWMTKHKKLTAIPV 372 (410)
T ss_dssp HHHHHHHHTT-TCEEEBCSBSSEEEEECGGGCCC-----------CTT--CCSSCC--H--HHHHHHHHHHHHSEECEEG
T ss_pred HHHHHHHHHC-CCeecCCCccEEEEEEchhhhcc-----------ccc--cccccc--C--HHHHHHHHHHHcCEEEeCc
Confidence 9999999998 88877544333444444321000 000 000000 0 123444443 447654444
Q ss_pred eeEC-------CEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 466 AIVG-------GIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 466 ~~~~-------g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
..+. +..++|++++. ++++|++++++|+++
T Consensus 373 ~~f~~~~~~~~~~~~iRis~~~---~~e~l~~~l~~l~~~ 409 (410)
T 3e2y_A 373 SAFCDSKSKPHFEKLVRFCFIK---KDSTLDAAEEIFRAW 409 (410)
T ss_dssp GGGSCTTTHHHHTTEEEEECCC---CHHHHHHHHHHHHTC
T ss_pred hhhCCCCCCCCCCCEEEEEEcC---CHHHHHHHHHHHHhc
Confidence 3332 24799999863 788999999998753
No 139
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.87 E-value=1.4e-20 Score=192.26 Aligned_cols=213 Identities=13% Similarity=0.125 Sum_probs=153.3
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH----HHHHc
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK----AAQIV 195 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~----aa~~~ 195 (502)
++.+++++++|.+ ..++++||++|+..++.+... +++.|+++...|.++.. .++..
T Consensus 66 ~l~~~ia~~~g~~---------~~i~~~~g~~ai~~~~~~l~~-----------~gd~Vl~~~~~y~~~~~~~~~~~~~~ 125 (404)
T 1e5e_A 66 NLEGKIAFLEKTE---------ACVATSSGMGAIAATVLTILK-----------AGDHLISDECLYGCTHALFEHALTKF 125 (404)
T ss_dssp HHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESCCCHHHHHHHHTHHHHT
T ss_pred HHHHHHHHHhCCC---------cEEEeCChHHHHHHHHHHHhC-----------CCCEEEEeCCCchhHHHHHHHHHHHc
Confidence 4555667777775 367888889998877765532 56788889999998877 77888
Q ss_pred CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH-hCCEEEeeccccc
Q 037144 196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ-FGIWVHVDAAYAG 274 (502)
Q Consensus 196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~-~g~~lhVDaA~g~ 274 (502)
|+ +++.+|.+ |+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|++ +|+++++|++|+.
T Consensus 126 g~---~~~~v~~~-------d~~~l~~~i~~~------t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~ 189 (404)
T 1e5e_A 126 GI---QVDFINTA-------IPGEVKKHMKPN------TKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCS 189 (404)
T ss_dssp TC---EEEEECTT-------STTHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTC
T ss_pred CC---EEEEECCC-------CHHHHHHhcCCC------CcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCch
Confidence 99 99998864 678899888653 3488899999999999999999999999 9999999999987
Q ss_pred ccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc
Q 037144 275 SACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI 352 (502)
Q Consensus 275 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~ 352 (502)
+....+. . .++|+++.++||+++.|.+ +|++++++. .+...+.....+...
T Consensus 190 ~~~~~~~--~-----~~~di~~~S~sK~~~~~g~ri~G~~~~~~~-~~~~~l~~~~~~~~g------------------- 242 (404)
T 1e5e_A 190 PMITNPV--D-----FGVDVVVHSATKYINGHTDVVAGLICGKAD-LLQQIRMVGIKDITG------------------- 242 (404)
T ss_dssp TTTCCGG--G-----GTCSEEEEETTTTTTCSSCCCCEEEEECHH-HHHHHHHTCCCCCCC-------------------
T ss_pred hhhCCcc--c-----cCCEEEEEcCccccCCCCCCeEEEEEECHH-HHHHHHHHHHHhCCC-------------------
Confidence 7643221 1 1689999999999998876 587777644 332122211111100
Q ss_pred cCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 037144 353 TLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFE 400 (502)
Q Consensus 353 ~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~ 400 (502)
.....+..|++++.+. .+..++++..++++.+.+.+++.+.++
T Consensus 243 ---~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~l~~~l~~~~~v~ 285 (404)
T 1e5e_A 243 ---SVISPHDAWLITRGLS--TLNIRMKAESENAMKVAEYLKSHPAVE 285 (404)
T ss_dssp ---CCCCHHHHHHHHHHHT--THHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred ---CCCCHHHHHHHHHhHh--HHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 0113455666666553 345667777888888888888776554
No 140
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.87 E-value=4.7e-21 Score=194.92 Aligned_cols=325 Identities=11% Similarity=0.040 Sum_probs=204.0
Q ss_pred HHHHHHHHh-hcCC-CCcccccChhhHHHHHHHHHHHHHhcCC---CCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 037144 91 GIVGEMLSS-GFNV-VGLDWISSPAAVELENIVMDWLGQMLDL---PKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL 165 (502)
Q Consensus 91 ~~~~~~l~~-~~n~-~~~~~~~~p~~~~le~~~~~~l~~l~g~---~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~ 165 (502)
..+.+.+.. .+.. ....|...++..++++++.+++....+. ++.. ..++|+||++++..++......
T Consensus 47 ~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~------~i~~t~g~~~a~~~~~~~~~~~-- 118 (397)
T 3fsl_A 47 QAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRV------ATIQTLGGSGALKVGADFLKRY-- 118 (397)
T ss_dssp HHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCE------EEEEESHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCcccccccce------EEEEcCCcHHHHHHHHHHHHhc--
Confidence 445555555 5544 3345666667788998988888766552 2200 3799999999998775433211
Q ss_pred HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144 166 KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245 (502)
Q Consensus 166 ~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~ 245 (502)
. +++.|+++..+|.++...++..|. +++.+|+..++++.+|+++|++++++. .....+|+.+.++|+
T Consensus 119 ~-------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~np 185 (397)
T 3fsl_A 119 F-------PESGVWVSDPTWENHVAIFAGAGF---EVSTYPWYDEATNGVRFNDLLATLKTL---QAGSIVLLHPCCHNP 185 (397)
T ss_dssp C-------TTCCEEEESSCCHHHHHHHHHTTC---CEEEECCEETTTTEECHHHHHHHHTTC---CTTCEEEECSSSCTT
T ss_pred C-------CCCeEEEeCCCchhHHHHHHHcCC---ceEEEeeeeccCCcCcHHHHHHHHHhC---CCCCEEEEeCCCCCC
Confidence 1 567788889999999999999999 999999843235799999999999742 122457888899999
Q ss_pred cccc---CChhHHHHHHHHhCCEEEeecccccccccCc-cchhh--hcCCCCCCeeEEccCCcCCC-CCcceEEEe--eC
Q 037144 246 ITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP-EFRHF--IDGVECVDSFSFNPHKWLFT-TLDCCCLWV--KD 316 (502)
Q Consensus 246 ~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~-~~~~~--~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~--r~ 316 (502)
+|.+ +++++|+++|++||+++++|.+|+.+..... ..... +.+...-..+..+++|.++. ....|++++ .+
T Consensus 186 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~ 265 (397)
T 3fsl_A 186 TGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCED 265 (397)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSS
T ss_pred CCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCC
Confidence 9999 5677999999999999999999977654311 11111 11122344667789999974 455788765 33
Q ss_pred chhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc--------HHHHHHHHHHHHHHHHH
Q 037144 317 PSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG--------VANLRNFIRSHVGMAKL 388 (502)
Q Consensus 317 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~la~~ 388 (502)
+..+.........+..... + ....+....+...+. .+.++++.++..+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~-------------------~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 325 (397)
T 3fsl_A 266 AEAAGRVLGQLKATVRRNY-------------------S-SPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQE 325 (397)
T ss_dssp HHHHHHHHHHHHHHHHTTT-------------------S-SCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcc-------------------C-CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332211111000100000 0 001222222222221 45677888899999999
Q ss_pred HHHHHhcCC---CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEe
Q 037144 389 FERLVTSDK---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTH 465 (502)
Q Consensus 389 l~~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 465 (502)
+.+.|++++ ++++. ++..+++.|.-.+ ...+.+.+.+.|.. +.+
T Consensus 326 l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~-------------------------------~~~~~~~l~~~gi~-v~~ 372 (397)
T 3fsl_A 326 LVKVLSTEMPERNFDYL-LNQRGMFSYTGLS-------------------------------AAQVDRLREEFGVY-LIA 372 (397)
T ss_dssp HHHHHHHHCTTSCCTHH-HHCCSSEEECCCC-------------------------------HHHHHHHHHTTCEE-CCT
T ss_pred HHHHHHhcCCCCCceee-cCCceEEEecCCC-------------------------------HHHHHHHHHhCCEE-ECC
Confidence 999998864 56554 3334444442111 12344555566754 333
Q ss_pred eeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 466 AIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 466 ~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
+ + |++++.. ++ ++|++++++|+++
T Consensus 373 g---~----Ris~~~~-~~-~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 373 S---G----RMCVAGL-NT-ANVQRVAKAFAAV 396 (397)
T ss_dssp T---C----EEEGGGC-CT-TTHHHHHHHHHHH
T ss_pred C---C----eEEEEec-CH-hhHHHHHHHHHhh
Confidence 2 1 9998632 44 5799999999875
No 141
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.87 E-value=4.9e-20 Score=183.01 Aligned_cols=302 Identities=11% Similarity=0.036 Sum_probs=202.1
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (502)
..+.+.+...... ...| ..+...+ +++.+++++|.+.+ ..++|+|+++++..++...
T Consensus 32 ~~v~~a~~~~~~~-~~~y-~~~~~~~----lr~~la~~~~~~~~-------~i~~t~G~~~~l~~~~~~~---------- 88 (337)
T 3p1t_A 32 PRVQAAIAAAAAR-INRY-PFDAEPR----VMRKLAEHFSCPED-------NLMLVRGIDECFDRISAEF---------- 88 (337)
T ss_dssp HHHHHHHHHHGGG-TTSC-CTTHHHH----HHHHHHHHHTSCGG-------GEEEESHHHHHHHHHHHHS----------
T ss_pred HHHHHHHHHhhhh-hccC-CCCchHH----HHHHHHHHhCcCHH-------HEEEeCCHHHHHHHHHHhc----------
Confidence 3444555554432 2234 2344444 44556777788654 5899999999887665543
Q ss_pred cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
+++.|+++..+|.++...++..|+ +++.+|+++ ++.+|+++|+++. .+.+|+++.++|++|.+-
T Consensus 89 ---~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~--------~~~~v~i~~p~nptG~~~ 152 (337)
T 3p1t_A 89 ---SSMRFVTAWPGFDGYRARIAVSGL---RHFEIGLTD--DLLLDPNDLAQVS--------RDDCVVLANPSNPTGQAL 152 (337)
T ss_dssp ---TTSEEEEESSSCSHHHHHHTTSCC---EEEEECBCT--TSSBCHHHHTTCC--------TTEEEEEESSCTTTCCCC
T ss_pred ---CCCeEEEeCCCcHHHHHHHHHcCC---EEEEecCCC--CCCCCHHHHHhhc--------CCCEEEEeCCCCCCCCCC
Confidence 355788888999999999999999 999999875 4799999998751 134888999999999999
Q ss_pred ChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcc
Q 037144 251 PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQ 329 (502)
Q Consensus 251 pl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~ 329 (502)
|+++|.++|+++++ +++|.+|+.+....+. .......+.++.++||+++ .+.++|+++.. +.... .+.....
T Consensus 153 ~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~----~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~-~~~~~-~l~~~~~ 225 (337)
T 3p1t_A 153 SAGELDQLRQRAGK-LLIDETYVDYSSFRAR----GLAYGENELVFRSFSKSYGLAGLRLGALFGP-SELIA-AMKRKQW 225 (337)
T ss_dssp CHHHHHHHHHHCSE-EEEECTTGGGSSCSSS----CCCCBTTEEEEEESSSTTCCTTTCCEEEECC-HHHHH-HHHTTSC
T ss_pred CHHHHHHHHHhCCc-EEEECCChhhcccccc----ccccCCCEEEEeeCchhccCcchheEEEEeC-HHHHH-HHHhhcC
Confidence 99999999999997 5669999764321111 1122356688889999997 55667877664 33322 2211100
Q ss_pred cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCee
Q 037144 330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFS 408 (502)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~ 408 (502)
+. ....+...++...+. .+.+.+.+++..++++++.+.|+++ ++++. ++..+
T Consensus 226 ~~-------------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~ 278 (337)
T 3p1t_A 226 FC-------------------------NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVA-SSEAN 278 (337)
T ss_dssp TT-------------------------CSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBC-CCSSS
T ss_pred CC-------------------------CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-cCEEC-CCCCe
Confidence 00 002233333333332 3456778888888999999999988 78765 55666
Q ss_pred EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144 409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV 488 (502)
Q Consensus 409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di 488 (502)
++.|..... ..+.+.+.+.|..+.++..+....++|++++ +++++
T Consensus 279 ~~~~~~~~~-------------------------------~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~----~~~~~ 323 (337)
T 3p1t_A 279 FVLVENAAG-------------------------------ERTLRFLRERGIQVKDAGQFGLHHHIRISIG----REEDN 323 (337)
T ss_dssp EEEEECTTT-------------------------------HHHHHHHHHTTEECEEGGGGTCCSEEEEECC----CHHHH
T ss_pred EEEEEcCCH-------------------------------HHHHHHHHHCCeEEEECccCCCCCeEEEecC----CHHHH
Confidence 766654321 2345566667865544443444579999976 57799
Q ss_pred HHHHHHHHHHHH
Q 037144 489 RAAWTVVQEHLE 500 (502)
Q Consensus 489 ~~~~~~l~~~~~ 500 (502)
++++++|+++.+
T Consensus 324 ~~l~~al~~~~~ 335 (337)
T 3p1t_A 324 DRLLAALAEYSD 335 (337)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHhh
Confidence 999999998754
No 142
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.87 E-value=2.6e-20 Score=189.25 Aligned_cols=335 Identities=10% Similarity=0.059 Sum_probs=199.2
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCcc
Q 037144 92 IVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRE 171 (502)
Q Consensus 92 ~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~ 171 (502)
.+.+.+...+... .|...+...++|+. +++++|.+ ..+++++||+|+..++.+++... ...
T Consensus 16 ~~~~a~~~~~~~~--~~~~~~~~~~l~~~----la~~~~~~---------~~i~~~sGt~a~~~al~~~~~~~----~~~ 76 (390)
T 3b8x_A 16 LEYKAIQSVLDSK--MFTMGEYVKQYETQ----FAKTFGSK---------YAVMVSSGSTANLLMIAALFFTK----KPR 76 (390)
T ss_dssp HHHHHHHHHHHHT--CCSSCHHHHHHHHH----HHHHHTCS---------EEEEESCHHHHHHHHHHHTTSSS----SCS
T ss_pred HHHHHHHHHHHcC--CCCCChHHHHHHHH----HHHHHCCC---------cEEEECCHHHHHHHHHHHHHhhh----hcC
Confidence 3334444444322 23345555666655 56666764 36889999999988887662100 000
Q ss_pred CCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC
Q 037144 172 NISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP 251 (502)
Q Consensus 172 ~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp 251 (502)
..+++.|+++..+|.++..+++..|+ +++.+|++++ ++.+|+++|+++|++++ .+|+++ +.+|...|
T Consensus 77 ~~~g~~Vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~------~~v~~~---~~~g~~~~ 143 (390)
T 3b8x_A 77 LKKGDEIIVPAVSWSTTYYPLQQYGL---RVKFVDIDIN-TLNIDIESLKEAVTDST------KAILTV---NLLGNPNN 143 (390)
T ss_dssp CCTTCEEEEESSSCHHHHHHHHHTTC---EEEEECBCTT-TCSBCHHHHHHHCCTTE------EEEEEE---CGGGCCCC
T ss_pred CCCcCEEEECCCCcHHHHHHHHHcCC---EEEEEecCcc-ccCcCHHHHHHHhCcCC------eEEEEE---CCccChhh
Confidence 01567899999999999999999999 9999999864 47999999999986533 356665 36788999
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeE--EccCCcCCCCCcceEEEeeCchhhhh--hhcCC
Q 037144 252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFS--FNPHKWLFTTLDCCCLWVKDPSCLLS--TLSTN 327 (502)
Q Consensus 252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~--~~~hK~l~~p~~~g~~~~r~~~~l~~--~~~~~ 327 (502)
+++|.++|++||+++|+|+||+.+..... +.. +. ..|..+ ..++|.+++|.+ |+++++++..... .+...
T Consensus 144 ~~~i~~l~~~~~~~li~D~a~~~g~~~~~--~~~--g~-~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~~~~~~ 217 (390)
T 3b8x_A 144 FDEINKIIGGRDIILLEDNCESMGATFNN--KCA--GT-FGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILLCIRAH 217 (390)
T ss_dssp HHHHHHHHTTSCCEEEEECTTCTTCEETT--EET--TS-SSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHHHHTBT
T ss_pred HHHHHHHHHHcCCEEEEECcCcccCEECC--ccc--cc-ccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHHHHHhc
Confidence 99999999999999999999985544321 111 11 224444 334455655544 7777766443211 11110
Q ss_pred cccccCcc-C-CCCCcccccCC-Ccccc-cCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 328 PQYLKNEA-T-DQEPKEQEVGY-KDWQI-TLCRR--FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 328 ~~yl~~~~-~-~~~~~~~~~~~-~~~~~-~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
.+..+.. . ..........+ ..+.. ..+.+ ...+..+.++.. .+.+++..++..++++++.+.|+++|++++
T Consensus 218 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~--l~~l~~~~~~~~~~~~~l~~~L~~~~~~~~ 294 (390)
T 3b8x_A 218 -GWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQ--LKKLPRFISVRRKNAEYFLDKFKDHPYLDV 294 (390)
T ss_dssp -TBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTCSSEEE
T ss_pred -CCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccc
Confidence 0000000 0 00000000000 00000 11222 344555666554 367888999999999999999999999988
Q ss_pred ecCC-CeeE--EEEEeecC-cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE---e------eeE
Q 037144 402 AFPR-NFSL--VCFRVTPS-AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT---H------AIV 468 (502)
Q Consensus 402 ~~~~-~~~~--v~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~------~~~ 468 (502)
..++ ..+. +.+.+.+. +. ...++.+.|.++|...-. + ..+
T Consensus 295 ~~~~~~~~~~~~~i~~~~~~~~---------------------------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~ 347 (390)
T 3b8x_A 295 QQETGESSWFGFSFIIKKDSGV---------------------------IRKQLVENLNSAGIECRPIVTGNFLKNTDVL 347 (390)
T ss_dssp CCCCSBCCCCEEEEEECTTSCC---------------------------CHHHHHHHHHHTTBCCBCSTTSSGGGCHHHH
T ss_pred CCCCCCcccEEEEEEecCcCcc---------------------------cHHHHHHHHHHCCCCeeeecCCchhhcchhh
Confidence 6532 2333 34444321 10 023566777777764322 1 001
Q ss_pred C--C--------------EEEEEEEecCCCCcHHHHHHHHHHH
Q 037144 469 G--G--------------IYVLRFAAGNSMTMESHVRAAWTVV 495 (502)
Q Consensus 469 ~--g--------------~~~lR~~~~~~~t~~~di~~~~~~l 495 (502)
. + ...||+++. +.++++||+++++.|
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~l~l~~~-~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 348 KYFDYTVHNNVDNAEYLDKNGLFVGNH-QIELFDEIDYLREVL 389 (390)
T ss_dssp TTCEEEESSCCHHHHHHHHHEEEEECC-SSCCHHHHHHHHHHT
T ss_pred hcCCCCCcCCChHHHHHhcCEEEeeCC-CCCCHHHHHHHHHhh
Confidence 1 0 136999974 677888999999876
No 143
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.87 E-value=2.6e-20 Score=192.80 Aligned_cols=307 Identities=12% Similarity=0.005 Sum_probs=201.1
Q ss_pred CcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC
Q 037144 105 GLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT 184 (502)
Q Consensus 105 ~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 184 (502)
...|...++..++++.+.+|+. .|++... ...++|+|+++++..+ ..... +++.|+++...
T Consensus 104 ~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~-----~~i~~t~G~~~al~~~-~~l~~-----------~gd~Vl~~~p~ 164 (449)
T 3qgu_A 104 YSGYGAEQGQGALREAVASTFY--GHAGRAA-----DEIFISDGSKCDIARI-QMMFG-----------SKPTVAVQDPS 164 (449)
T ss_dssp CCCSTTTTCCHHHHHHHHHHHH--TTTTCCG-----GGEEEESCHHHHHHHH-HHHHC-----------SSSCEEEEESC
T ss_pred CCCCCCCCCcHHHHHHHHHHHH--cCCCCCH-----HHEEEccCHHHHHHHH-HHHhC-----------CCCEEEEcCCC
Confidence 3455555567889999888887 5553221 2689999999888654 33221 56778889999
Q ss_pred chhHHHHHHHcCCCCCC----------EEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---
Q 037144 185 HCAFQKAAQIVGIDRKN----------IRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP--- 251 (502)
Q Consensus 185 H~s~~~aa~~~Glg~~~----------v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp--- 251 (502)
|.++..+++..|. + ++.+|++.++.+..|++++ ..+.+|+++.++|++|.+-+
T Consensus 165 ~~~~~~~~~~~g~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~v~l~~p~NPtG~~~~~~~ 230 (449)
T 3qgu_A 165 YPVYVDTSVMMGM---TGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----------KRTDIIFFCSPNNPTGAAATRAQ 230 (449)
T ss_dssp CTHHHHHHHHHTC---SCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----------CCCSEEEEESSCTTTCCCCCHHH
T ss_pred ChhHHHHHHHcCC---cccccccccceeEEEecccccCCcCChhHc-----------CCCCEEEEeCCCCCCCCcCCHHH
Confidence 9999999999998 7 9999998644455554321 12347777799999999855
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhh------
Q 037144 252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLS------ 322 (502)
Q Consensus 252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~------ 322 (502)
+++|+++|++||+++++|++|+++.......... +.+....+.+..+++|+++ .+..+|+++.++... ..
T Consensus 231 l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~-~~~~~~~~ 309 (449)
T 3qgu_A 231 LTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALK-YANGEPVH 309 (449)
T ss_dssp HHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCB-CTTSCBHH
T ss_pred HHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHH-hhhhhhHH
Confidence 8888999999999999999998765432111111 1112355688889999997 556788888754321 10
Q ss_pred -hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 037144 323 -TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG---VANLRNFIRSHVGMAKLFERLVTSDKR 398 (502)
Q Consensus 323 -~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~la~~l~~~l~~~~~ 398 (502)
.+.....+. . .....+...++...+. .+.+.++.+++.++++++.+.|++. +
T Consensus 310 ~~~~~~~~~~--------------------~---~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 365 (449)
T 3qgu_A 310 ADWNRVMTTC--------------------F---NGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-G 365 (449)
T ss_dssp HHHHHHHHHS--------------------C---CCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred HHHHHHhhcc--------------------c---CCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-C
Confidence 000000000 0 0113344444454443 3567888899999999999999998 7
Q ss_pred eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeE--CCEEEEE
Q 037144 399 FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIV--GGIYVLR 475 (502)
Q Consensus 399 ~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lR 475 (502)
+++..+....++.+.+. +.. ..++.++|.++ |.++.++..+ .+..++|
T Consensus 366 ~~~~~~~~~~~~~~~~~--~~~---------------------------~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iR 416 (449)
T 3qgu_A 366 FSVYGGDDAPYIWVGFP--GKP---------------------------SWDVFAEILERCNIVTTPGSGYGPAGEGFVR 416 (449)
T ss_dssp CCEEESSSSSEEEEECT--TSC---------------------------HHHHHHHHHHHHCEECEEGGGGCGGGTTEEE
T ss_pred CeeeCCCCeeEEEEECC--CCC---------------------------HHHHHHHHHHHCCEEEecchHhCCCCCCeEE
Confidence 88875444555555553 110 23556666665 7644443322 2357999
Q ss_pred EEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 476 FAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 476 ~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+++. .++++|+++++.|+++.++
T Consensus 417 is~~---~~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 417 ASAF---GSRENILEAVRRFKEAYGK 439 (449)
T ss_dssp EECC---SCHHHHHHHHHHHHHHHC-
T ss_pred EEec---CCHHHHHHHHHHHHHHHHh
Confidence 9965 3778999999999988653
No 144
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.87 E-value=1.6e-20 Score=193.45 Aligned_cols=230 Identities=11% Similarity=0.079 Sum_probs=161.8
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH----HH
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA----AQ 193 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a----a~ 193 (502)
..++.+++++++|.+. .+++++|++|+..++.+... +++.|+++...|.+.... ++
T Consensus 116 ~~~l~~~lA~l~g~~~---------~v~~~sG~~Ai~~al~~l~~-----------~Gd~Vi~~~~~y~~~~~~~~~~~~ 175 (445)
T 1qgn_A 116 TVVLEEKISALEGAES---------TLLMASGMCASTVMLLALVP-----------AGGHIVTTTDCYRKTRIFIETILP 175 (445)
T ss_dssp HHHHHHHHHHHHTCSE---------EEEESCHHHHHHHHHHHHSC-----------SSCEEEEETTSCHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHhCCCc---------EEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhHHHHHHHHHH
Confidence 3445566788888752 46666777998877765432 567888888888876664 45
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccc
Q 037144 194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 273 (502)
Q Consensus 194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g 273 (502)
..|+ +++.+|.+ |+++|+++|++++ +.+|+++.++|++|.+.|+++|+++|+++|+++|+|++|+
T Consensus 176 ~~G~---~v~~v~~~-------d~~~l~~ai~~~t-----v~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~ 240 (445)
T 1qgn_A 176 KMGI---TATVIDPA-------DVGALELALNQKK-----VNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFA 240 (445)
T ss_dssp GGTC---EEEEECSS-------CHHHHHHHHHHSC-----EEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred HcCC---EEEEeCCC-------CHHHHHHHhccCC-----CCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCc
Confidence 6788 88888753 8999999998653 2488889999999999999999999999999999999998
Q ss_pred cccccCccchhhhcCCCCCCeeEEccCCcCCCCC--cceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc
Q 037144 274 GSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL--DCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ 351 (502)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~--~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 351 (502)
.+....+ . . .++|.++.++||+++.+. ..|+++.++ ..+. .+. .+....
T Consensus 241 ~~~~~~~-~-~-----~g~Div~~S~sK~~gg~gd~~~G~l~~~~-~l~~-~l~---~~~~~~----------------- 291 (445)
T 1qgn_A 241 TPLNQKA-L-A-----LGADLVLHSATKFLGGHNDVLAGCISGPL-KLVS-EIR---NLHHIL----------------- 291 (445)
T ss_dssp CTTTCCT-T-T-----TTCSEEEECTTTTTTCSSSCCCEEEEECH-HHHH-HHH---HHHHHH-----------------
T ss_pred ccccCCc-c-c-----cCCEEEEECCcccccccccceEEEEEECH-HHHH-HHH---HHHHHh-----------------
Confidence 6644322 1 1 178999999999997553 277777654 3222 111 010000
Q ss_pred ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe-EEecC-----C-----------CeeEEEEEe
Q 037144 352 ITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRF-EVAFP-----R-----------NFSLVCFRV 414 (502)
Q Consensus 352 ~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~-~l~~~-----~-----------~~~~v~f~~ 414 (502)
+-...++..|.+++. .+.+..++++..++++++.+.|++.|++ .+..+ | ..++++|.+
T Consensus 292 ---g~~~~~~~a~~~~~~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l 366 (445)
T 1qgn_A 292 ---GGALNPNAAYLIIRG--MKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEV 366 (445)
T ss_dssp ---CCCCCHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEE
T ss_pred ---CCCCCHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEE
Confidence 001134455665554 4566777888888999999999999988 44433 1 357888988
Q ss_pred ec
Q 037144 415 TP 416 (502)
Q Consensus 415 ~~ 416 (502)
.+
T Consensus 367 ~~ 368 (445)
T 1qgn_A 367 DG 368 (445)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 145
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.87 E-value=3e-20 Score=186.38 Aligned_cols=294 Identities=11% Similarity=0.009 Sum_probs=185.2
Q ss_pred HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH---HHHHc
Q 037144 119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK---AAQIV 195 (502)
Q Consensus 119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~---aa~~~ 195 (502)
.++.+++++++|.+. .++++||++|+..++.+....- .+.+|+++...|++... .+...
T Consensus 51 ~~l~~~la~~~~~~~---------~i~~~~g~~a~~~a~~~~~~~g---------~~~vvi~~~~~~~~~~~~~~~~~~~ 112 (359)
T 3pj0_A 51 EDFETKIAKILGKQS---------AVFFPSGTMAQQIALRIWADRK---------ENRRVAYHPLSHLEIHEQDGLKELQ 112 (359)
T ss_dssp HHHHHHHHHHHTCSE---------EEEESCHHHHHHHHHHHHHHHH---------TCCEEEECTTCHHHHSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCc---------EEEeCCHHHHHHHHHHHHHhcC---------CCcEEEEeccceeeehhcchHHHhc
Confidence 345566788888753 4677899999988888776530 22357777778876543 23567
Q ss_pred CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc-cccCChhHH---HHHHHHhCCEEEeecc
Q 037144 196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI-TAVDPLKPL---CDVAKQFGIWVHVDAA 271 (502)
Q Consensus 196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~-G~idpl~eI---~~i~~~~g~~lhVDaA 271 (502)
|. +++.+|.+ ++.+|+++|+++ .+ .+.+|+++.+++++ |.+.|+++| +++|++||+|+|+|++
T Consensus 113 g~---~~~~v~~~---~~~~d~~~l~~~-~~------~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a 179 (359)
T 3pj0_A 113 QI---TPLLLGTA---NQLLTIDDIKSL-RE------PVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGA 179 (359)
T ss_dssp CC---EEEECSCT---TSCCCHHHHHTC-SS------CCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEET
T ss_pred Cc---eEEecCCc---CCCcCHHHHHhc-cC------CceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECc
Confidence 88 88888863 468999999987 22 23478888887777 788775555 9999999999999999
Q ss_pred cccccccC--ccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCc
Q 037144 272 YAGSACIC--PEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKD 349 (502)
Q Consensus 272 ~g~~~~~~--~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 349 (502)
|..+.... ....... ..+|++++++||++++|.+ |+ ++.++.......... .......
T Consensus 180 ~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~g-g~-~~~~~~l~~~~~~~~-~~~~~~~-------------- 239 (359)
T 3pj0_A 180 RLWEITPFYQKSAEEIC---ALFDSVYVSFYKGIGGIAG-AI-LAGNDDFVQEAKIWK-RRYGGDL-------------- 239 (359)
T ss_dssp TCGGGHHHHTCCHHHHH---TTCSEEEEESSSTTCCSSC-EE-EEECHHHHHHHHHHH-HHTTCCC--------------
T ss_pred chhcchhhhCCCHHHhh---ccCCEEEEeccccCCCcce-EE-EECCHHHHHHHHHHH-HHhCCCc--------------
Confidence 85443211 1111211 3689999999999988855 44 445554432211100 0000000
Q ss_pred ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cCCCeeEEEEEeecCcchhhhhhccc
Q 037144 350 WQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA-FPRNFSLVCFRVTPSAVMDKLRTKYK 428 (502)
Q Consensus 350 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~-~~~~~~~v~f~~~~~~~~~~~~~~~~ 428 (502)
+. ....+.....+++. ..+.+++..++++++.+.|+++|++++. .++..+++.+.+....
T Consensus 240 ~~----~~~~~~a~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~---------- 300 (359)
T 3pj0_A 240 IS----LYPYILSADYYFEK-----RIGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSA---------- 300 (359)
T ss_dssp SC----CHHHHHHHHHHHHH-----HGGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCH----------
T ss_pred ch----hHHHHHHHHHHHHH-----HHHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCcc----------
Confidence 00 00011111222222 1245566788899999999999999986 4566777777765421
Q ss_pred CCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee--ECCEEEEEEEecCC--CCcHHHHHHHHHHHHHH
Q 037144 429 NGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI--VGGIYVLRFAAGNS--MTMESHVRAAWTVVQEH 498 (502)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~g~~~lR~~~~~~--~t~~~di~~~~~~l~~~ 498 (502)
......+.+.+.++|..+.++.. ..+..++|+++... ..+.++++++++.|.+.
T Consensus 301 ----------------~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 301 ----------------DEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp ----------------HHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred ----------------chhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 11235677777778875443322 25678999998643 24667888888877654
No 146
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.86 E-value=5e-21 Score=196.38 Aligned_cols=304 Identities=11% Similarity=0.074 Sum_probs=186.4
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh-HHHHHH-
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-FQKAAQ- 193 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~aa~- 193 (502)
.++..+.+++++++|.+.. .++++||++|+..++.++.. +++.|+++..+|.+ +...+.
T Consensus 78 ~~~~~a~~~~~~~~~~~~~--------~v~~~~Gs~a~~~al~~~~~-----------~gd~Vi~~~~~~~~~~~~~~~~ 138 (425)
T 3ecd_A 78 EVEALAIERVKRLFNAGHA--------NVQPHSGAQANGAVMLALAK-----------PGDTVLGMSLDAGGHLTHGAKP 138 (425)
T ss_dssp HHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC-----------TTCEEEEECC------------
T ss_pred HHHHHHHHHHHHHhCCCCc--------eeecCchHHHHHHHHHHccC-----------CCCEEEEcccccccceecchhh
Confidence 5566666889999998652 35688999999888776632 67788888899987 323332
Q ss_pred -HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 194 -IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 194 -~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
..|.+. .++.++.++ +++.+|+++|++++++.. +.+|+++.+++ |...++++|.++|++||+++++|++|
T Consensus 139 ~~~g~~~-~~~~~~~~~-~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l~~i~~l~~~~~~~li~De~~ 209 (425)
T 3ecd_A 139 ALSGKWF-NALQYGVSR-DTMLIDYDQVEALAQQHK-----PSLIIAGFSAY--PRKLDFARFRAIADSVGAKLMVDMAH 209 (425)
T ss_dssp ------C-EEEEECCCT-TTSSCCHHHHHHHHHHHC-----CSEEEEECSCC--CSCCCHHHHHHHHHHHTCEEEEECGG
T ss_pred hhcccce-eeeecCCCc-ccCccCHHHHHHHHhhcC-----CcEEEEccccC--CCcCCHHHHHHHHHHcCCEEEEECcC
Confidence 445411 334455543 347999999999997531 23666665444 78899999999999999999999997
Q ss_pred ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccc
Q 037144 273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQI 352 (502)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~ 352 (502)
+.+.......... +..+|+++.++||++.+|. .|+++.+++.... .+.. +.....
T Consensus 210 ~~g~~~~~~~~~~---~~~~di~~~s~sK~l~g~~-~g~~~~~~~~~~~-~~~~---~~~~~~----------------- 264 (425)
T 3ecd_A 210 IAGVIAAGRHANP---VEHAHVVTSTTHKTLRGPR-GGFVLTNDEEIAK-KINS---AVFPGL----------------- 264 (425)
T ss_dssp GHHHHHTTSSCCG---GGTCSEEEEESSGGGCCCS-CEEEEESCHHHHH-HHHH---HHC--------------------
T ss_pred hHhhhhcccccCc---hhcCcEEEecCCcccCCCC-cEEEEeCCHHHHH-HHHh---hhCccc-----------------
Confidence 6655433222111 2258999999999997664 5777666543322 2211 111000
Q ss_pred cCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhhcccCC
Q 037144 353 TLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNG 430 (502)
Q Consensus 353 ~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~ 430 (502)
.++.. ....+++.++.....+++.++.++..++++++.+.|.+. +++++.+ ...+++.+.+.+...
T Consensus 265 ~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~----------- 332 (425)
T 3ecd_A 265 QGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTDNHLLLVDLRPKGL----------- 332 (425)
T ss_dssp --CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTC-----------
T ss_pred cCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCceEEEEEeCCCCC-----------
Confidence 00000 012344455555556778899999999999999999985 7888753 345566666543211
Q ss_pred CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee------ECCEEEEEEEecCC---CCcHHHHHHHHHHHHHHHH
Q 037144 431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI------VGGIYVLRFAAGNS---MTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~------~~g~~~lR~~~~~~---~t~~~di~~~~~~l~~~~~ 500 (502)
....+.+.+.+.|..+..... ......+|+++... ..++++|+++++.|+++.+
T Consensus 333 ----------------~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~ 395 (425)
T 3ecd_A 333 ----------------KGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFE 395 (425)
T ss_dssp ----------------CHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred ----------------CHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHh
Confidence 023455666666865432210 11234799985422 2347899999999988765
No 147
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.86 E-value=1.4e-20 Score=195.84 Aligned_cols=351 Identities=12% Similarity=0.092 Sum_probs=198.9
Q ss_pred cccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHH
Q 037144 78 NYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTL 157 (502)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al 157 (502)
.|++|..+.+. ..+.+.+...+......|...+...++++ ++++++|.+ .+++|+|||+|+..++
T Consensus 44 ~ylD~~~~~~~--~~v~~a~~~~~~~~~~~y~~~~~~~~l~~----~la~~~~~~---------~v~~t~ggt~A~~~al 108 (467)
T 1ax4_A 44 VYIDLLTDSGT--NAMSDHQWAAMITGDEAYAGSRNYYDLKD----KAKELFNYD---------YIIPAHQGRGAENILF 108 (467)
T ss_dssp CSEECSCSSSC--CCEEHHHHHHHHTCCCCSSSCHHHHHHHH----HHHHHHCCC---------EEEEESSHHHHHHHHH
T ss_pred eeeecccCcCC--HHHHHHHHHHHhhcccccccCccHHHHHH----HHHHHcCCC---------cEEEcCCcHHHHHHHH
Confidence 47777544332 22333333333222234555565555554 566666653 4899999999999999
Q ss_pred HHHHHHHHHHhCccCCCCeE---EEeCCCCch-hHHHHHHHcCCCCCCEEEEecCC----C----CCcccCHHHHHHHHH
Q 037144 158 TAARDRVLKKIGRENISKLV---VYSSDQTHC-AFQKAAQIVGIDRKNIRAIKTTK----S----SSYGLSAESVLSQIN 225 (502)
Q Consensus 158 ~~a~~~~~~~~~~~~~~~~~---v~~s~~~H~-s~~~aa~~~Glg~~~v~~v~~~~----~----~~~~~d~~~Le~~i~ 225 (502)
.++++.... +++. |+++ ..|+ ++..++...|. .++.++.+. + .++.+|+++|+++|+
T Consensus 109 ~~~~~~~~~-------~Gd~~~~viv~-~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~ 177 (467)
T 1ax4_A 109 PVLLKYKQK-------EGKAKNPVFIS-NFHFDTTAAHVELNGC---KAINIVTEKAFDSETYDDWKGDFDIKKLKENIA 177 (467)
T ss_dssp HHHHHHHHH-------TTCCSSCEEEE-SSCCHHHHHHHHHTTC---EEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHH
T ss_pred HHHHHhhcc-------CCCccceEEEe-ccccchhhHHHhccCC---ceecccccccccccccCCcccccCHHHHHHHHH
Confidence 988763211 2333 5556 5664 55667788888 777765431 0 135799999999998
Q ss_pred HHHhcCCccEEEEEecCCccc-ccc---CChhHHHHHHHHhCCEEEeeccccc-ccccC--------c-cchhhhc-CCC
Q 037144 226 LDVEAELIPLFLCATVGTTAI-TAV---DPLKPLCDVAKQFGIWVHVDAAYAG-SACIC--------P-EFRHFID-GVE 290 (502)
Q Consensus 226 ~~~~~g~~p~~Vv~t~gtt~~-G~i---dpl~eI~~i~~~~g~~lhVDaA~g~-~~~~~--------~-~~~~~~~-~~~ 290 (502)
+.. ...+.+|+++.+++++ |.+ +++++|+++|++||+|+|+|++++. +..+. + ....... -..
T Consensus 178 ~~~--~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (467)
T 1ax4_A 178 QHG--ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYK 255 (467)
T ss_dssp HHC--GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGG
T ss_pred hcC--CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhcc
Confidence 632 0124578888889999 665 5688999999999999999998654 11100 0 0001000 002
Q ss_pred CCCeeEEccCCcCCCCCcceEEEeeCc-hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCch-HHHHHHH
Q 037144 291 CVDSFSFNPHKWLFTTLDCCCLWVKDP-SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSL-KLWVVIR 368 (502)
Q Consensus 291 ~aDsi~~~~hK~l~~p~~~g~~~~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al-~~~~~l~ 368 (502)
.+|++++++||+++.|.| |+++.+++ ............+ .... . + .+.....+ ++..++.
T Consensus 256 ~~d~~~~s~sK~~g~~~G-g~~~~~d~~~l~~~~~~~~~~~-~~~~-~------------~---~~~~~~~~~a~~~~l~ 317 (467)
T 1ax4_A 256 YADALTMSAKKDPLLNIG-GLVAIRDNEEIFTLARQRCVPM-EGFV-T------------Y---GGLAGRDMAAMVQGLE 317 (467)
T ss_dssp GCSEEEEETTSTTCCSSC-EEEEESSCHHHHHHHHHHHHHH-TCST-T------------T---TTCCHHHHHHHHHHHH
T ss_pred ccceEEEeccccCCCCcc-eEEEeCCHHHHHHHHHhhcccc-cccc-c------------c---CCccchHHHHHHHHHH
Confidence 588999999999987743 55555545 4432211111101 0000 0 0 00000111 1111333
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecC--cchhhhhhcccCCCcccccccchhHhhHH
Q 037144 369 NFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPS--AVMDKLRTKYKNGTYDQYRQFSEEERTNE 446 (502)
Q Consensus 369 ~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (502)
..-. .+.+++..++++++.+.|++ +++++..+.....+.+..... .. ... ..
T Consensus 318 ~~~~---~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~--~~ 371 (467)
T 1ax4_A 318 EGTE---EEYLHYRIGQVKYLGDRLRE-AGIPIQYPTGGHAVFVDCKKLVPQI--------------------PGD--QF 371 (467)
T ss_dssp HTTC---HHHHHHHHHHHHHHHHHHHH-TTCCBCSSCCSSEEEEESTTTCTTS--------------------CGG--GC
T ss_pred Hhhh---hhHHHHHHHHHHHHHHHHHh-CCCCcccCCCceEEEEehhhhcccc--------------------ccC--CC
Confidence 2211 22444555778889999987 578776554444555552110 00 000 00
Q ss_pred HHHHHHHHH-HhcCcEEEEeeeE--------C-----CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 447 FNRELLESI-NVSGKVFMTHAIV--------G-----GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 447 ~~~~l~~~l-~~~g~~~~~~~~~--------~-----g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
...++.++| .+.|..+.+.+.+ + ...++|+++....+++++|+++++.|+++.+
T Consensus 372 ~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~ 439 (467)
T 1ax4_A 372 PAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKE 439 (467)
T ss_dssp HHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHH
T ss_pred CHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 134566676 6668655441211 0 1369999986455788899999999988764
No 148
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.86 E-value=1.3e-19 Score=188.08 Aligned_cols=317 Identities=13% Similarity=0.066 Sum_probs=194.8
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc-
Q 037144 107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH- 185 (502)
Q Consensus 107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H- 185 (502)
.|..++...++++. +++++|.+ .+++|+|||+|+..++.++.. +++ +++..+|
T Consensus 70 ~y~~~~~~~~l~~~----la~~~~~~---------~~~~~~~gt~a~~~al~~l~~-----------~gd--i~~~~~~~ 123 (456)
T 2ez2_A 70 AYAGSENFYHLERT----VQELFGFK---------HIVPTHQGRGAENLLSQLAIK-----------PGQ--YVAGNMYF 123 (456)
T ss_dssp CSSSCHHHHHHHHH----HHHHHCCS---------EEEEESSHHHHHHHHHHHHCC-----------TTC--EEEESSCC
T ss_pred hcccChhHHHHHHH----HHHHhCCC---------cEEEeCCcHHHHHHHHHHhCC-----------CCC--Eecccccc
Confidence 45566666666665 55666653 479999999999888876632 445 4556677
Q ss_pred hhHHHHHHHcCCCCCCEEEEecCCC----C----CcccCHHHHHHHHHHHHhcCCccEEEEEecCCc-cccccCC---hh
Q 037144 186 CAFQKAAQIVGIDRKNIRAIKTTKS----S----SYGLSAESVLSQINLDVEAELIPLFLCATVGTT-AITAVDP---LK 253 (502)
Q Consensus 186 ~s~~~aa~~~Glg~~~v~~v~~~~~----~----~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt-~~G~idp---l~ 253 (502)
.++..++...|. +++.++++++ . ++.+|+++|+++|++.++ ..+.+|+++.+++ ++|.+-| ++
T Consensus 124 ~~~~~~~~~~G~---~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~--~~~~~v~l~~p~n~ptG~~~~~~~l~ 198 (456)
T 2ez2_A 124 TTTRYHQEKNGA---VFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA--ENIAYICLAVTVNLAGGQPVSMANMR 198 (456)
T ss_dssp HHHHHHHHHTTC---EEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG--GGEEEEEEESSBTTTTSBCCCHHHHH
T ss_pred chhHHHHHHcCC---EEEEecccccccccccccccCCCCHHHHHHHHHhccc--cceeEEEEeccCCCCCCccCCHHHHH
Confidence 787889999999 9999988631 1 268999999999987541 1235777887777 8998866 99
Q ss_pred HHHHHHHHhCCEEEeecccccc---------cccCccch-h---hhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhh
Q 037144 254 PLCDVAKQFGIWVHVDAAYAGS---------ACICPEFR-H---FIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCL 320 (502)
Q Consensus 254 eI~~i~~~~g~~lhVDaA~g~~---------~~~~~~~~-~---~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l 320 (502)
+|+++|++||+|+|+|++|+.+ ........ . ... ...|.+++++||+++.| ..|+++.+++...
T Consensus 199 ~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~ 275 (456)
T 2ez2_A 199 AVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMF--SYADGCTMSGKKDCLVN-IGGFLCMNDDEMF 275 (456)
T ss_dssp HHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHH--TTCSEEEEETTTTTCCS-SCEEEEESCHHHH
T ss_pred HHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhc--ccCCEEEEeCcccCCCC-ceeEEEECCHHHH
Confidence 9999999999999999999763 11111110 0 011 14688888899997755 4677666555443
Q ss_pred hhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHH-HHHHHHHHHHHHHHHHHHhcCCCe
Q 037144 321 LSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANL-RNFIRSHVGMAKLFERLVTSDKRF 399 (502)
Q Consensus 321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~-~~~~~~~~~la~~l~~~l~~~~~~ 399 (502)
.........+. .... ..+.....+.. +++... +.+ .+..++..++++++.+.|++. ++
T Consensus 276 ~~~~~~~~~~~-~~~~----------------~~~~~~~~~~a-~a~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 334 (456)
T 2ez2_A 276 SSAKELVVVYE-GMPS----------------YGGLAGRDMEA-MAIGLR--EAMQYEYIEHRVKQVRYLGDKLKAA-GV 334 (456)
T ss_dssp HHHHHHHHHHT-CCTT----------------TTTCCHHHHHH-HHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHHHHhhcc-Cccc----------------ccCcchhHHHH-HHHHHH--HHhHHHHHHHHHHHHHHHHHHHhcC-CC
Confidence 22111111110 0000 00000011111 022211 233 466777788889999999885 78
Q ss_pred EEecCCCeeEEEEEeec--CcchhhhhhcccCCCcccccccchhHhhHHH-HHHHHHHH-HhcCcEEEEeee--------
Q 037144 400 EVAFPRNFSLVCFRVTP--SAVMDKLRTKYKNGTYDQYRQFSEEERTNEF-NRELLESI-NVSGKVFMTHAI-------- 467 (502)
Q Consensus 400 ~l~~~~~~~~v~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l-~~~g~~~~~~~~-------- 467 (502)
++..+.....+.+.+.. .+. +. .++ ...+.++| .+.|...+....
T Consensus 335 ~~~~p~~~~~~~~~~~~~~~~~--------------------~~---~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~ 391 (456)
T 2ez2_A 335 PIVEPVGGHAVFLDARRFCEHL--------------------TQ---DEFPAQSLAASIYVETGVRSMERGIISAGRNNV 391 (456)
T ss_dssp CBCSSCCSSEEEEEHHHHTTTS--------------------CG---GGCHHHHHHHHHHHHHSEECEEESHHHHCBCTT
T ss_pred ccccCCCceEEEEEhHHhcCCC--------------------Ch---hhccHHHHHHHHHHhcCeeeecccccccccCcc
Confidence 77654444444444421 110 00 112 34556666 455765444221
Q ss_pred -----ECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 468 -----VGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 468 -----~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..+..++|+++....+++++|+++++.|+++.++
T Consensus 392 ~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~ 430 (456)
T 2ez2_A 392 TGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQH 430 (456)
T ss_dssp TCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHT
T ss_pred ccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 1123689999875436788999999999987653
No 149
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.86 E-value=1.1e-21 Score=197.84 Aligned_cols=319 Identities=13% Similarity=0.108 Sum_probs=202.1
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+... .|..++...++|+. +++++|.+ .+++++|||+|+..++.+++-.
T Consensus 15 ~~~v~~a~~~~~~~~--~~~~~~~~~~l~~~----la~~~~~~---------~~~~~~sGt~al~~al~~~~~~------ 73 (367)
T 3nyt_A 15 KDKIDAGIQRVLRHG--QYILGPEVTELEDR----LADFVGAK---------YCISCANGTDALQIVQMALGVG------ 73 (367)
T ss_dssp HHHHHHHHHHHHHHC--CCSSCHHHHHHHHH----HHHHHTCS---------EEEEESCHHHHHHHHHHHTTCC------
T ss_pred CHHHHHHHHHHHhcC--CccCChHHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHhCCC------
Confidence 334445555444332 33455666666655 56666764 3799999999998888776311
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++.|+++..+|.++..++...|+ +++.++++++ ++.+|+++|+++|++++ .+|+ +++++|..
T Consensus 74 ----~gd~Vi~~~~~~~~~~~~~~~~G~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~------~~v~---~~~~~G~~ 136 (367)
T 3nyt_A 74 ----PGDEVITPGFTYVATAETVALLGA---KPVYVDIDPR-TYNLDPQLLEAAITPRT------KAII---PVSLYGQC 136 (367)
T ss_dssp ----TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCTT-TCSBCGGGTGGGCCTTE------EEEC---CBCGGGCC
T ss_pred ----CcCEEEECCCccHHHHHHHHHcCC---EEEEEecCCc-cCCcCHHHHHHhcCcCC------cEEE---eeCCccCh
Confidence 677899999999999999999999 9999999864 47999999999985433 3444 66789999
Q ss_pred CChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEc--cCCcCCCCCcceEEEeeCchhhhhhhcCC
Q 037144 250 DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFN--PHKWLFTTLDCCCLWVKDPSCLLSTLSTN 327 (502)
Q Consensus 250 dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~--~hK~l~~p~~~g~~~~r~~~~l~~~~~~~ 327 (502)
.|+++|.++|++||+++|+|++|+.+........ +. ..|.++++ +||+++.+...|+++.+++..........
T Consensus 137 ~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~----~~-~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~ 211 (367)
T 3nyt_A 137 ADFDAINAIASKYGIPVIEDAAQSFGASYKGKRS----CN-LSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIA 211 (367)
T ss_dssp CCHHHHHHHHHHTTCCBEEECTTTTTCEETTEET----TS-SSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHcCCEEEEECccccCCeECCeec----cC-CCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHH
Confidence 9999999999999999999999975544221111 11 12778877 59999874446666665554432211100
Q ss_pred cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC-
Q 037144 328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN- 406 (502)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~- 406 (502)
.+ .. ...+.......+.+...+..+.++.. .+.+++..++..++++++.+.|+++ ++.+...+.
T Consensus 212 -~~---g~--------~~~~~~~~~g~~~~~~~~~aa~~~~~--l~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~ 276 (367)
T 3nyt_A 212 -RH---GQ--------DRRYHHIRVGVNSRLDTLQAAILLPK--LEIFEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVN 276 (367)
T ss_dssp -BT---TE--------EETTEECSCCCBCCCCHHHHHHHHHH--HHTHHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTT
T ss_pred -hc---CC--------CcCceeeccCcCCCccHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccC-CeeccCCCCC
Confidence 00 00 00000001111222344444444443 3556778888999999999999988 465543221
Q ss_pred ----eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee--------EC-----
Q 037144 407 ----FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI--------VG----- 469 (502)
Q Consensus 407 ----~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~----- 469 (502)
..++.+... . ...+.+.|.++|.....+.. +.
T Consensus 277 ~~~~~~~~~~~~~-~------------------------------~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~ 325 (367)
T 3nyt_A 277 NISVYAQYTVRMD-N------------------------------RESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAK 325 (367)
T ss_dssp EECCCSSEEEECS-S------------------------------HHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCC
T ss_pred CceeeEEEEEEeC-C------------------------------HHHHHHHHHHCCCceeccCCCccccChhhhccCCC
Confidence 112333221 1 23566667777863221110 00
Q ss_pred -------CEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 470 -------GIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 470 -------g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
....||+.+ ++.++++||+++++.|++.
T Consensus 326 ~~~~~~~~~~~l~lp~-~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 326 LPVGDKAATQVMSLPM-HPYLDTASIKIICAALTNL 360 (367)
T ss_dssp CHHHHHHHHHEEEECC-CTTCCHHHHHHHHHHHHC-
T ss_pred ChHHHHHHhCeEEccC-CCCCCHHHHHHHHHHHHHH
Confidence 135799986 5778888999999999764
No 150
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.86 E-value=5.7e-20 Score=186.51 Aligned_cols=279 Identities=13% Similarity=0.111 Sum_probs=187.9
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH----HHHc
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA----AQIV 195 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a----a~~~ 195 (502)
++.+.+++++|.+. .+++++|++|+..++.++.. +++.|+++...|.+.... ++..
T Consensus 56 ~l~~~la~~~~~~~---------~i~~~sGt~a~~~~~~~~~~-----------~g~~vl~~~~~~~~~~~~~~~~~~~~ 115 (386)
T 1cs1_A 56 VVQRALAELEGGAG---------AVLTNTGMSAIHLVTTVFLK-----------PGDLLVAPHDCYGGSYRLFDSLAKRG 115 (386)
T ss_dssp HHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhCCCc---------EEEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCCcHhHHHHHHHHHHhc
Confidence 34455667777652 34456669999888776532 567788888899875543 3556
Q ss_pred CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccc
Q 037144 196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS 275 (502)
Q Consensus 196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~ 275 (502)
|+ +++.+|.+ |+++|+++|++++ .+|+++.++|++|.+.|+++|.++|++||+++|+|++|+++
T Consensus 116 g~---~~~~~~~~-------d~~~l~~~i~~~~------~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~ 179 (386)
T 1cs1_A 116 CY---RVLFVDQG-------DEQALRAALAEKP------KLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSP 179 (386)
T ss_dssp SC---EEEEECTT-------CHHHHHHHHHTCC------SEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCT
T ss_pred CC---EEEEeCCC-------CHHHHHHhhccCC------cEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccc
Confidence 77 88888753 8999999997533 37888999999999999999999999999999999999887
Q ss_pred cccCccchhhhcCCCCCCeeEEccCCcCCCCCcc--eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccccc
Q 037144 276 ACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC--CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQIT 353 (502)
Q Consensus 276 ~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~--g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 353 (502)
....+. . .++|.++.++||+++.|.+. |+++++++.... .+.. +....
T Consensus 180 ~~~~~~--~-----~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~-~l~~---~~~~~------------------- 229 (386)
T 1cs1_A 180 ALQNPL--A-----LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVT-ELAW---WANNI------------------- 229 (386)
T ss_dssp TTCCGG--G-----GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHH-HHHH---HHHHH-------------------
T ss_pred ccCCcc--c-----cCceEEEEcCcccccCCCCceeEEEEeCcHHHHH-HHHH---HHHhc-------------------
Confidence 654321 1 16899999999999988764 888887644322 2211 11000
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-C----------------CCeeEEEEEeec
Q 037144 354 LCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF-P----------------RNFSLVCFRVTP 416 (502)
Q Consensus 354 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~-~----------------~~~~~v~f~~~~ 416 (502)
+.....+..|.+++.+ +.+..+.++..++++++.+.|++++.+.-.. + ...++++|.+..
T Consensus 230 -~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (386)
T 1cs1_A 230 -GVTGGAFDSYLLLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG 306 (386)
T ss_dssp -TCBCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS
T ss_pred -CCCCCHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC
Confidence 0001233444444433 4456677778888999999998887665331 1 125677887643
Q ss_pred CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC---------------------------
Q 037144 417 SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG--------------------------- 469 (502)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--------------------------- 469 (502)
. ...+.+.+.+.|.+. ....++
T Consensus 307 ~------------------------------~~~~~~~l~~~gi~~-~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~ 355 (386)
T 1cs1_A 307 D------------------------------EQTLRRFLGGLSLFT-LAESLGGVESLISHAATMTHAGMAPEARAAAGI 355 (386)
T ss_dssp C------------------------------HHHHHHHHHTCSSSE-EBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTC
T ss_pred C------------------------------HHHHHHHHHhCCcce-EcccCCCcceeeecccccccccCCHHHHHhcCC
Confidence 1 124455566667643 211111
Q ss_pred CEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 470 GIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 470 g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
...++|+++.. .+++++|+++.++|+++.
T Consensus 356 ~~~~iRis~~~-~~~~~~i~~l~~al~~~~ 384 (386)
T 1cs1_A 356 SETLLRISTGI-EDGEDLIADLENGFRAAN 384 (386)
T ss_dssp CTTEEEEECCS-SCHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEcc-CCHHHHHHHHHHHHHHhh
Confidence 13689999875 577779999999998764
No 151
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.86 E-value=6.6e-20 Score=188.52 Aligned_cols=326 Identities=12% Similarity=0.082 Sum_probs=205.0
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCccC-c-CCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144 108 WISSPAAVELENIVMDWLGQMLDLPKSFL-F-SGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH 185 (502)
Q Consensus 108 ~~~~p~~~~le~~~~~~l~~l~g~~~~~~-~-~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (502)
|....+..++.+++.+++++.+|.+.... . .+....++|+|+++++..++.+..+ +++.|++...+|
T Consensus 74 Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~-----------~gd~Vlv~~p~y 142 (425)
T 2r2n_A 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIIN-----------PGDNVLLDEPAY 142 (425)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCC-----------CCCEEEEeCCCc
Confidence 44445567889999999999999864100 0 0001589999999999877776543 567888899999
Q ss_pred hhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH------hcCCccEEEEE-ecCCccccccCChh---HH
Q 037144 186 CAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDV------EAELIPLFLCA-TVGTTAITAVDPLK---PL 255 (502)
Q Consensus 186 ~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~------~~g~~p~~Vv~-t~gtt~~G~idpl~---eI 255 (502)
.++...++..|. +++.+|++. + .+|+++|++++++.. ..+..+.+|++ ..++|+||.+-|.+ +|
T Consensus 143 ~~~~~~~~~~g~---~~~~v~~~~--~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l 216 (425)
T 2r2n_A 143 SGTLQSLHPLGC---NIINVASDE--S-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEI 216 (425)
T ss_dssp HHHHHHHGGGTC---EEEEECEET--T-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHH
T ss_pred HHHHHHHHHcCC---EEEEeCcCC--C-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHH
Confidence 999999999999 999999874 2 499999999986311 00112335544 67899999997755 99
Q ss_pred HHHHHHhCCEEEeecccccccccCccchhhhc-CCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCc
Q 037144 256 CDVAKQFGIWVHVDAAYAGSACICPEFRHFID-GVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNE 334 (502)
Q Consensus 256 ~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~-~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~ 334 (502)
+++|++||+++++|++|+.+.+.......... .....+.+..+++|+++....+|+++.++. .. +.+........
T Consensus 217 ~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~-l~-~~l~~~~~~~~-- 292 (425)
T 2r2n_A 217 YELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKP-LI-ERVILHIQVST-- 292 (425)
T ss_dssp HHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHH-HH-HHHHHHHHTTT--
T ss_pred HHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCHH-HH-HHHHHHHHHhc--
Confidence 99999999999999999865432211111110 111334667889999973345788887643 22 22211000000
Q ss_pred cCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH----HHHHHHHHHHHHHHHHHHHHHhc-CCCeEEecCCCee-
Q 037144 335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV----ANLRNFIRSHVGMAKLFERLVTS-DKRFEVAFPRNFS- 408 (502)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~----~g~~~~~~~~~~la~~l~~~l~~-~~~~~l~~~~~~~- 408 (502)
+ +........+..+++.++. +.++++.+++.++++++.+.|++ .|++..+..|..+
T Consensus 293 ---------------~---~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~ 354 (425)
T 2r2n_A 293 ---------------L---HPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGM 354 (425)
T ss_dssp ---------------C---SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSS
T ss_pred ---------------C---CCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceE
Confidence 0 0000111222333333222 34566677788889999999987 6777433334434
Q ss_pred EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC-----CEEEEEEEecCCCC
Q 037144 409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG-----GIYVLRFAAGNSMT 483 (502)
Q Consensus 409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----g~~~lR~~~~~~~t 483 (502)
++++.+.... + .. ..+.+.+.+.|..+.++..+. +..++|++++. .
T Consensus 355 ~~~~~~~~~~---------------------~---~~---~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~--~ 405 (425)
T 2r2n_A 355 FLWIKVKGIN---------------------D---VK---ELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS--A 405 (425)
T ss_dssp EEEEEETTCS---------------------C---CH---HHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS--C
T ss_pred EEEEEeCCCC---------------------C---HH---HHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC--C
Confidence 4455553210 0 01 124555666786554443332 24789999863 4
Q ss_pred cHHHHHHHHHHHHHHHHh
Q 037144 484 MESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 484 ~~~di~~~~~~l~~~~~~ 501 (502)
++++|+++++.|.++.++
T Consensus 406 ~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 406 SPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 778999999999988754
No 152
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.77 E-value=1.7e-23 Score=212.89 Aligned_cols=333 Identities=10% Similarity=0.021 Sum_probs=216.1
Q ss_pred HHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhC
Q 037144 90 AGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIG 169 (502)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (502)
+..+.+.+...+......|... ..++++++.+|+.+.+|.+... ...++|+||++++..++.+...
T Consensus 46 ~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~------- 111 (392)
T 3b1d_A 46 MPEVKQAIHDYAEQLVYGYTYA--SDELLQAVLDWEKSEHQYSFDK-----EDIVFVEGVVPAISIAIQAFTK------- 111 (392)
Confidence 3445555555554333344432 6789999999999988853221 2588999999999888777643
Q ss_pred ccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 170 RENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK-SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~-~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++.|++...+|.++..+++..|. +++.+|.++ ++++.+|+++|++++++.. +.+|+++.++|++|.
T Consensus 112 ----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~g~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~ 179 (392)
T 3b1d_A 112 ----EGEAVLINSPVYPPFARSVRLNNR---KLVSNSLKEENGLFQIDFEQLENDIVEND-----VKLYLLCNPHNPGGR 179 (392)
Confidence 466788888999999999999999 999999853 2346799999999997321 235667889999999
Q ss_pred cCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhh---cCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhh
Q 037144 249 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI---DGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLL 321 (502)
Q Consensus 249 idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~---~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~ 321 (502)
+-| +++|+++|++||+++++|++|+.+........... ......+.+..+++|+++ ....+|+++++++....
T Consensus 180 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 259 (392)
T 3b1d_A 180 VWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCA 259 (392)
Confidence 854 99999999999999999999987654321111111 111234567788999997 45567888876543322
Q ss_pred hhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeE
Q 037144 322 STLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS-DKRFE 400 (502)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~-~~~~~ 400 (502)
.+....... ++..........+..+++. +.+.++++.++..++++++.+.|++ +|+++
T Consensus 260 -~~~~~~~~~-------------------~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 318 (392)
T 3b1d_A 260 -QFKHQQLVN-------------------NHHEVSSLGYIATETAYRY-GKPWLVALKAVLEENIQFAVEYFAQEAPRLK 318 (392)
Confidence 121110000 0000011111222233332 3456778888888999999999988 78887
Q ss_pred EecCCCeeEEE-EEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeEC--CEEEEEE
Q 037144 401 VAFPRNFSLVC-FRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVG--GIYVLRF 476 (502)
Q Consensus 401 l~~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~ 476 (502)
+. ++..+++. +.+...+ ....++.+++. +.|..+.++..+. +..++|+
T Consensus 319 ~~-~~~~~~~~~i~~~~~~---------------------------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi 370 (392)
T 3b1d_A 319 VM-KPQGTYLIWLDFSDYG---------------------------LTDDALFTLLHDQAKVILNRGSDYGSEGELHARL 370 (392)
Confidence 76 45555554 4443210 01235666665 5676554443332 4678999
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHH
Q 037144 477 AAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 477 ~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
+++. ++++|+++++.|.++.+
T Consensus 371 ~~~~---~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 371 NIAA---PKSLVEEICKRIVCCLP 391 (392)
Confidence 9763 46799999999988754
No 153
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.86 E-value=3.2e-20 Score=189.96 Aligned_cols=347 Identities=10% Similarity=-0.017 Sum_probs=212.1
Q ss_pred CCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchH
Q 037144 72 THWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCE 151 (502)
Q Consensus 72 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~ 151 (502)
.+..+..+++.... ..++..+.+.+....+.....|...++..++.+++.+|+....+.+.. ...++|+||++
T Consensus 40 i~l~~g~~~~~~~~-~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~------~~i~~t~g~~~ 112 (413)
T 3t18_A 40 INAALGTLLDDKGK-IIALPSVYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGY------ISAIATPGGTG 112 (413)
T ss_dssp EECCSCCCBCTTSC-BCCCHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSE------EEEEEESHHHH
T ss_pred EeccccCccCCCCC-cCChHHHHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCcccc------CcEEEcCccHH
Confidence 33334444443322 233344556655543222345655567788999999999887664321 15899999999
Q ss_pred HHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC
Q 037144 152 ALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE 231 (502)
Q Consensus 152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g 231 (502)
|+..++.+..+ +++.|+++...|.++...++..|. +++.+|++++ ++.+|+++|++++++....+
T Consensus 113 al~~~~~~~~~-----------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~~ 177 (413)
T 3t18_A 113 AIRSAIFSYLD-----------EGDPLICHDYYWAPYRKICEEFGR---NFKTFEFFTD-DFAFNIDVYKEAIDEGIRDS 177 (413)
T ss_dssp HHHHHHHHHCC-----------SSCEEEEESSCCTHHHHHHHHHTC---EEEEECCBCT-TSSBCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcC-----------CCCEEEECCCCcccHHHHHHHhCC---eEEEeeccCC-CCCcCHHHHHHHHHHHhhcC
Confidence 99887775533 677888999999999999999999 9999998543 47999999999998642211
Q ss_pred CccEEEEEecC-CccccccCChhHHH---HHHH------HhCCEEEeecccccccccCccchhhhcCCC--CCC---eeE
Q 037144 232 LIPLFLCATVG-TTAITAVDPLKPLC---DVAK------QFGIWVHVDAAYAGSACICPEFRHFIDGVE--CVD---SFS 296 (502)
Q Consensus 232 ~~p~~Vv~t~g-tt~~G~idpl~eI~---~i~~------~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~--~aD---si~ 296 (502)
...+|+++.+ +|++|.+-|.+++. ++|+ +||+++++|.+|.++............... ..| .+.
T Consensus 178 -~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 256 (413)
T 3t18_A 178 -DRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVA 256 (413)
T ss_dssp -SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEE
T ss_pred -CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEE
Confidence 1236777777 89999998866655 5555 899999999999776543221122111111 123 455
Q ss_pred EccCCcCC-CCCcceEEEee--CchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-
Q 037144 297 FNPHKWLF-TTLDCCCLWVK--DPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV- 372 (502)
Q Consensus 297 ~~~hK~l~-~p~~~g~~~~r--~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~- 372 (502)
.+++|.++ ....+|+++.. ++.... .+.....+..... ......+...++...+..
T Consensus 257 ~S~sK~~~~~G~riG~~~~~~~~~~~~~-~~~~~~~~~~~~~-------------------~~~~~~~~~~a~~~~l~~~ 316 (413)
T 3t18_A 257 FSMSKSHTAYGLRSGAAVGISSSKEIIE-EFEASLAHSARCN-------------------WSNGTHAAQNILIELERAE 316 (413)
T ss_dssp EEHHHHTTCGGGCCEEEEEEESCHHHHH-HHHHHHHHHHHHH-------------------TSSCCHHHHHHHHHTTSHH
T ss_pred EecCccCCCcCcCcEEEEEecCCHHHHH-HHHHHHHHhhhcc-------------------ccCCChHHHHHHHHHhcCh
Confidence 68999998 44557887762 444322 2211111110000 000123344444444432
Q ss_pred ------HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHH
Q 037144 373 ------ANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNE 446 (502)
Q Consensus 373 ------~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (502)
+..+++.+++.++++++.+.|+++ ++++. +++.+++.|.-...
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~~~~~~~~~~~----------------------------- 365 (413)
T 3t18_A 317 NKKIYEQELVDLRNMLKSRADVFVTAAKEN-KLTMI-PYFGGFFTFIPTDK----------------------------- 365 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCB-CCCSSSCEEEECSC-----------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCcc-CCCceEEEEeCCCC-----------------------------
Confidence 233456677888899999999988 78776 45555544422111
Q ss_pred HHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 447 FNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 447 ~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
..++.+.|.+.|..+.++ ..++|++++.. ++++.++++.+.++++.
T Consensus 366 -~~~~~~~l~~~gv~v~~g-----~~~iRis~~~~-~~~~~l~~l~~~l~~~~ 411 (413)
T 3t18_A 366 -AFDIVKDLEKENIFTIPS-----AKGIRVAICGV-GEEKIPKLVQRLAFYTN 411 (413)
T ss_dssp -HHHHHHHHHHTTEECEEC-----SSEEEECTTTS-CGGGHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHhCCEEEecC-----CCceEEEEeeC-CHHHHHHHHHHHHHHHh
Confidence 234566666677654332 46899998744 33334666666665543
No 154
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.86 E-value=2.3e-20 Score=188.75 Aligned_cols=309 Identities=10% Similarity=0.067 Sum_probs=194.9
Q ss_pred ChhhHHHHHHHHHHH-HHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHH-HHHHHHHhCccCCCCeEEEeCCCCchhH
Q 037144 111 SPAAVELENIVMDWL-GQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAA-RDRVLKKIGRENISKLVVYSSDQTHCAF 188 (502)
Q Consensus 111 ~p~~~~le~~~~~~l-~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a-~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (502)
+|...++|++ + ++++|... ..++++|||+|+..++.+. .. +++.|+++...|.++
T Consensus 35 ~~~~~~l~~~----~~a~~~g~~~--------~~v~~~sgt~al~~al~~l~~~-----------~Gd~Vi~~~~~~~~~ 91 (377)
T 3ju7_A 35 GPINQRFEQT----IMSGFFQNRG--------AVTTVANATLGLMAAIQLKKRK-----------KGKYALMPSFTFPAT 91 (377)
T ss_dssp CHHHHHHHHH----HHHHTSTTCS--------EEEEESCHHHHHHHHHHHHSCT-----------TCCEEEEESSSCTHH
T ss_pred CHHHHHHHHH----HHHHHhCCCC--------eEEEeCCHHHHHHHHHHHcCCC-----------CcCEEEECCCCcHHH
Confidence 5666666665 5 77777322 4799999999998887765 22 678899999999999
Q ss_pred HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHH-HHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144 189 QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQI-NLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 189 ~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i-~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh 267 (502)
..++...|+ +++.++++++ ++.+|+++|++++ +++. ++.+|+ +++++|...|+++|.++|+ +|+++|
T Consensus 92 ~~~~~~~G~---~~~~v~~~~~-~~~~d~~~l~~~i~~~~~----~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi 159 (377)
T 3ju7_A 92 PLAAIWCGL---EPYFIDISID-DWYMDKTVLWDKIEELKE----EVAIVV---PYATFGSWMNLEEYEELEK-KGVPVV 159 (377)
T ss_dssp HHHHHHTTC---EEEEECBCTT-TCSBCHHHHHHHHHHHGG----GEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBE
T ss_pred HHHHHHcCC---EEEEEecCCc-cCCcCHHHHHHHHhcCCC----CceEEE---EECCCCCccCHHHHHHHHh-cCCEEE
Confidence 999999999 9999999853 6899999999998 4431 122454 4567899999999999999 999999
Q ss_pred eecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCC
Q 037144 268 VDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGY 347 (502)
Q Consensus 268 VDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 347 (502)
+|+||+.+..... +..-.....++.+++++||++++ ...|+++++++.......... .+ ... .....
T Consensus 160 ~D~a~a~g~~~~~--~~~g~~~~d~~~~S~~~~K~l~~-g~gG~~~~~~~~l~~~~~~~~-~~----g~~-----~~~~~ 226 (377)
T 3ju7_A 160 VDAAPGFGLMNGG--MHYGQDFSGMIIYSFHATKPFGI-GEGGLIYSKNEEDIQRIKRMG-NF----GFD-----TNREC 226 (377)
T ss_dssp EECTTCTTCEETT--EETTTTCSSEEEEECBTTSSSCC-BSCEEEEESCHHHHHHHHHHT-BT----TBC-----TTSCB
T ss_pred EECCCccCCeECC--EeccCCCCcEEEEECCCCCcCCC-CCcEEEEECCHHHHHHHHHHH-hc----CCC-----CCCce
Confidence 9999976543211 11101112455666678999986 356666666654332211100 00 000 00000
Q ss_pred CcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cCCC----e-eEEEEEeecCcchh
Q 037144 348 KDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA-FPRN----F-SLVCFRVTPSAVMD 421 (502)
Q Consensus 348 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~-~~~~----~-~~v~f~~~~~~~~~ 421 (502)
......-+...+..+..+. +.+.+.++.++..++++++.+.|++++++.+. .++. . ..+.++.....
T Consensus 227 --~~~g~~~~~~~~~aa~~~~--~l~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 299 (377)
T 3ju7_A 227 --TMMGFNCKMSEYAAAIGIA--TMKKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEV--- 299 (377)
T ss_dssp --CSSCCBCCCCHHHHHHHHH--HHHTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTS---
T ss_pred --eeccccCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChh---
Confidence 0001111223444444443 34778889999999999999999988754221 1111 1 12334432210
Q ss_pred hhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee--e------EC-------------CEEEEEEEecC
Q 037144 422 KLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA--I------VG-------------GIYVLRFAAGN 480 (502)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~------~~-------------g~~~lR~~~~~ 480 (502)
...++.+.|.++|+..-.+. . +. ....||+.+ +
T Consensus 300 -------------------------~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~-~ 353 (377)
T 3ju7_A 300 -------------------------RNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPL-W 353 (377)
T ss_dssp -------------------------CHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECC-C
T ss_pred -------------------------hHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCC-C
Confidence 03467788888886422111 0 00 135899997 5
Q ss_pred CCCcHHHHHHHHHHHHHHHH
Q 037144 481 SMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 481 ~~t~~~di~~~~~~l~~~~~ 500 (502)
+.++++|++++++.|+++..
T Consensus 354 ~~~t~~di~~v~~~l~~~~~ 373 (377)
T 3ju7_A 354 EGMTKEIVEQIVICLGQKVV 373 (377)
T ss_dssp TTCCHHHHHHHHHHHTC---
T ss_pred CCCCHHHHHHHHHHHHHHHh
Confidence 67788899999999987654
No 155
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.86 E-value=4.2e-20 Score=192.18 Aligned_cols=375 Identities=11% Similarity=0.061 Sum_probs=204.4
Q ss_pred CCHHHHHHHHHHhhcCCCCC-CCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCC
Q 037144 54 ESVETILQDVQEHIVPGITH-WQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLP 132 (502)
Q Consensus 54 ~~~~~il~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~ 132 (502)
....+-.+.+...- .+..+ .....|+.|..+.+. ..+.+.+...+......|...+...++++ ++++++|.+
T Consensus 18 ~~~~~~~~~~~~~g-~~~~~~~~~~~ylD~~~~~~~--~~v~~a~~~~l~~~~~~y~~~~~~~~l~~----~la~~~~~~ 90 (467)
T 2oqx_A 18 TTRAYREEAIIKSG-MNPFLLDSEDVFIDLLTDSGT--GAVTQSMQAAMMRGDEAYSGSRSYYALAE----SVKNIFGYQ 90 (467)
T ss_dssp CCHHHHHHHHHHTT-SCGGGSCGGGCSEECSCCSSC--SCCCHHHHHHTTSCCCCSSSCHHHHHHHH----HHHHHHCCS
T ss_pred ccHHHHHHHHHHcC-CCceeccCCCeeEecccCCCc--HHHHHHHHHHhccCcceeccCchhHHHHH----HHHHHhCcC
Confidence 34555555554421 11111 122357777554433 33344445555443335666666555554 566666653
Q ss_pred CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhH-HHHHHHcCCCCCCEEEE-----
Q 037144 133 KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAF-QKAAQIVGIDRKNIRAI----- 205 (502)
Q Consensus 133 ~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~-~~aa~~~Glg~~~v~~v----- 205 (502)
.+++|+|||+||..++.+++.......| .++ +.|+++ ..|+.. .......|. .++..
T Consensus 91 ---------~v~~t~~gt~A~~~al~~~~~~~~~~~G---~~~~d~Ii~~-~~h~~t~~~~~~~~~~---~~~~~~~~~~ 154 (467)
T 2oqx_A 91 ---------YTIPTHQGRGAEQIYIPVLIKKREQEKG---LDRSKMVAFS-NYFFDTTQGHSQINGC---TVRNVYIKEA 154 (467)
T ss_dssp ---------EEEEEC--CCSHHHHHHHHHHHHHHHHC---CCTTTCEEEE-SSCCHHHHHHHHHTTC---EEEECBCTTT
T ss_pred ---------cEEEcCCcHHHHHHHHHHHhccccccCC---CCccceEEec-ccccccchhhhhccCc---ceeecccccc
Confidence 4899999999999999988753111111 011 445555 577543 333444555 44432
Q ss_pred -ecCC--CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc-ccc---CChhHHHHHHHHhCCEEEeeccccc-ccc
Q 037144 206 -KTTK--SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI-TAV---DPLKPLCDVAKQFGIWVHVDAAYAG-SAC 277 (502)
Q Consensus 206 -~~~~--~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~-G~i---dpl~eI~~i~~~~g~~lhVDaA~g~-~~~ 277 (502)
+.+. ..++.+|+++|+++|++.. ...+.+|+++.+++++ |.+ +++++|+++|++||+|||+|++++. ..+
T Consensus 155 ~~~~~~~~~~~~~d~~~Le~~i~~~~--~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~ 232 (467)
T 2oqx_A 155 FDTGVRYDFKGNFDLEGLERGIEEVG--PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAY 232 (467)
T ss_dssp TCTTSCCTTTTCBCHHHHHHHHHHHC--GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHH
T ss_pred ccCCCCCCccCCcCHHHHHHHHHhcC--CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhh
Confidence 1210 0246899999999998631 0123478888888887 665 5689999999999999999988755 221
Q ss_pred --------cCc-cchhhh-cCCCCCCeeEEccCCcCCCCCcceEEEeeCc---hhhhhhhcCCcccc-cCccCCCCCccc
Q 037144 278 --------ICP-EFRHFI-DGVECVDSFSFNPHKWLFTTLDCCCLWVKDP---SCLLSTLSTNPQYL-KNEATDQEPKEQ 343 (502)
Q Consensus 278 --------~~~-~~~~~~-~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~---~~l~~~~~~~~~yl-~~~~~~~~~~~~ 343 (502)
... ...... .....+|++++++||+++.|.| |+++.++. ..+.. + ..+. .....
T Consensus 233 ~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~~~~~~~~~~~-~---~~~~~~~~~~------- 300 (467)
T 2oqx_A 233 FIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCMKDDSFFDVYTE-C---RTLCVVQEGF------- 300 (467)
T ss_dssp HHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSC-EEEEECSGGGHHHHHH-H---HHHHHHTTSS-------
T ss_pred hcccccccccCccHHHHhhhhhccCCeEEEecccccCCCCc-eEEEecChhHHHHHHH-H---HHhhhccCCc-------
Confidence 111 111110 0013588899999999987744 55555544 12211 1 1111 00000
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHH-HHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeec--Ccch
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANL-RNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTP--SAVM 420 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~-~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~--~~~~ 420 (502)
.+.+.. .+.. ..++...-.+.+ .+.+++..++++++.+.|+++ ++++. +....++.+.+.. .+.
T Consensus 301 --------~~~~~~-~~~~-~~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~~~~- 367 (467)
T 2oqx_A 301 --------PTYGGL-EGGA-MERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ-QAGGHAAFVDAGKLLPHI- 367 (467)
T ss_dssp --------CCCCCC-CHHH-HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE-EECSSCEEEEHHHHSTTS-
T ss_pred --------ccccch-hhhH-HHHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC-CCeee-cCCceEEEEechhhcccC-
Confidence 000000 1111 112221001122 235566678899999999888 78777 5445556665531 110
Q ss_pred hhhhhcccCCCcccccccchhHhhHHH-HHHHHHHH-HhcCcEEEEeeeE--C-----------CEEEEEEEecCCCCcH
Q 037144 421 DKLRTKYKNGTYDQYRQFSEEERTNEF-NRELLESI-NVSGKVFMTHAIV--G-----------GIYVLRFAAGNSMTME 485 (502)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l-~~~g~~~~~~~~~--~-----------g~~~lR~~~~~~~t~~ 485 (502)
+. .++ ..++.++| .+.|..+.+...+ . +..++|+++....+++
T Consensus 368 -------------------~~---~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~ 425 (467)
T 2oqx_A 368 -------------------PA---DQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQ 425 (467)
T ss_dssp -------------------CG---GGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCH
T ss_pred -------------------Cc---ccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCH
Confidence 00 111 34567777 6678654432211 0 2368999986332678
Q ss_pred HHHHHHHHHHHHHHH
Q 037144 486 SHVRAAWTVVQEHLE 500 (502)
Q Consensus 486 ~di~~~~~~l~~~~~ 500 (502)
++|+++++.|+++.+
T Consensus 426 e~i~~~~~~l~~~l~ 440 (467)
T 2oqx_A 426 THMDFIIEAFKHVKE 440 (467)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 899999999998765
No 156
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.85 E-value=1.3e-20 Score=193.36 Aligned_cols=244 Identities=14% Similarity=0.097 Sum_probs=169.0
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|...++| +++++++|.+. ++++++|++|+..++.+... +++.|+++...|.+..
T Consensus 80 ~~p~~~~le----~~lA~l~g~~~---------~v~~~sG~~Ai~~al~al~~-----------~Gd~Vi~~~~~y~~~~ 135 (430)
T 3ri6_A 80 SNPTVEDLE----QRLKNLTGALG---------VLALGSGMAAISTAILTLAR-----------AGDSVVTTDRLFGHTL 135 (430)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE---------EEEESCHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHH
T ss_pred CCHHHHHHH----HHHHHHHCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhHH
Confidence 345555555 55777888653 57778889998877766533 6788899999998777
Q ss_pred H----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCE
Q 037144 190 K----AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIW 265 (502)
Q Consensus 190 ~----aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~ 265 (502)
. .+...|+ +++.++.+ |+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 136 ~~~~~~~~~~G~---~~~~v~~~-------d~~~l~~ai~~~------t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~ 199 (430)
T 3ri6_A 136 SLFQKTLPSFGI---EVRFVDVM-------DSLAVEHACDET------TKLLFLETISNPQLQVADLEALSKVVHAKGIP 199 (430)
T ss_dssp HHHHTHHHHTTC---EEEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHcCC---EEEEeCCC-------CHHHHHHhhCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 6 6678899 89988864 899999998654 34888999999999999999999999999999
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC--cceEEEeeCchhhh---------hhhcCCcccccCc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL--DCCCLWVKDPSCLL---------STLSTNPQYLKNE 334 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~--~~g~~~~r~~~~l~---------~~~~~~~~yl~~~ 334 (502)
+++|++|+.+.+..+. .. ++|+++.+++|++++|. .+|+++.+....+. +.+. ...|+...
T Consensus 200 livD~a~~~~~~~~~~--~~-----g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g-~~~~i~~~ 271 (430)
T 3ri6_A 200 LVVDTTMTPPYLLEAK--RL-----GVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAG-PMAFLYKA 271 (430)
T ss_dssp EEEECTTSCTTTCCGG--GG-----TCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHG-GGHHHHHH
T ss_pred EEEECCCcccccCChH--Hc-----CCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhc-hhhHHHHH
Confidence 9999999876553221 11 68999999999998762 34555544332110 0000 00011000
Q ss_pred cCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC--------
Q 037144 335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN-------- 406 (502)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~-------- 406 (502)
. ..+....+....++..|..++ |.+.+..++++..++++++.+.|++.|+++.+..|.
T Consensus 272 ~------------~~~~~~~g~~~~~~~a~l~l~--~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~ 337 (430)
T 3ri6_A 272 R------------KEVFQNLGPSLSPHNAYLQSL--GLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYA 337 (430)
T ss_dssp H------------HTHHHHHCCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHH
T ss_pred H------------HHHHHhcCCCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHH
Confidence 0 000001122234556666665 567788899999999999999999999988654333
Q ss_pred --------ee-EEEEEee
Q 037144 407 --------FS-LVCFRVT 415 (502)
Q Consensus 407 --------~~-~v~f~~~ 415 (502)
.+ +++|.+.
T Consensus 338 ~~~~~~g~Gg~~lsf~l~ 355 (430)
T 3ri6_A 338 IAKRQFRYAGSILTFELE 355 (430)
T ss_dssp HHHHHCSSCCSEEEEECS
T ss_pred HHHHhCCCCceEEEEEEC
Confidence 34 8888875
No 157
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.85 E-value=1.1e-20 Score=194.05 Aligned_cols=326 Identities=11% Similarity=0.020 Sum_probs=204.8
Q ss_pred HHHHHHHHhhcCC-CCcccccChhhHHHHHHHHHHHHHhcCC---CCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHH
Q 037144 91 GIVGEMLSSGFNV-VGLDWISSPAAVELENIVMDWLGQMLDL---PKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLK 166 (502)
Q Consensus 91 ~~~~~~l~~~~n~-~~~~~~~~p~~~~le~~~~~~l~~l~g~---~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~ 166 (502)
..+.+.+...+.. ....|....+..++.+.+.+++....+. ++.. ..++|+||++|+..++...... .
T Consensus 70 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~------~i~~t~G~t~al~~~~~~~~~~--~ 141 (420)
T 4f4e_A 70 RAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRV------VTAQALGGTGALKIGADFLRTL--N 141 (420)
T ss_dssp HHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCE------EEEEEEHHHHHHHHHHHHHHHH--C
T ss_pred HHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCce------EEEECCccHHHHHHHHHHHHHh--C
Confidence 4455555554433 3345666667788998988888766552 2210 4799999999998775432111 1
Q ss_pred HhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144 167 KIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246 (502)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~ 246 (502)
+++.|+++..+|.++...++..|. +++.+|+..++++.+|+++|++++++. .....+|+.+.++|+|
T Consensus 142 -------~gd~Vlv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~NPt 208 (420)
T 4f4e_A 142 -------PKAKVAISDPSWENHRALFDMAGF---EVVAYPYYDAKTNGVNFDGMLAALNGY---EPGTIVVLHACCHNPT 208 (420)
T ss_dssp -------TTCCEEEEESCCHHHHHHHHHTTC---CEEEEECEETTTTEECHHHHHHHHTTC---CTTCEEEEECSSCTTT
T ss_pred -------CCCEEEEeCCCcHhHHHHHHHcCC---eEEEeeeeccccCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCC
Confidence 567788899999999999999999 999999832235799999999999632 1224578888999999
Q ss_pred ccc---CChhHHHHHHHHhCCEEEeecccccccccCc-cchhh--hcCCCCCCeeEEccCCcCCC-CCcceEEEe--eCc
Q 037144 247 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP-EFRHF--IDGVECVDSFSFNPHKWLFT-TLDCCCLWV--KDP 317 (502)
Q Consensus 247 G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~-~~~~~--~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~--r~~ 317 (502)
|.+ +++++|+++|++||+++++|.+|+++....+ ..... +.+....+.++.+++|.++. ...+|++++ .++
T Consensus 209 G~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~ 288 (420)
T 4f4e_A 209 GVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSK 288 (420)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSH
T ss_pred CCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCH
Confidence 998 5577999999999999999999977665321 11111 11223455777889999984 455788764 333
Q ss_pred hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc--------HHHHHHHHHHHHHHHHHH
Q 037144 318 SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG--------VANLRNFIRSHVGMAKLF 389 (502)
Q Consensus 318 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~la~~l 389 (502)
............+..... .+ ...+..+++...+. .+.++++.+++.++++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~-----------------~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l 348 (420)
T 4f4e_A 289 DEAARVLSQLKRVIRTNY-----------------SN---PPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGL 348 (420)
T ss_dssp HHHHHHHHHHHHHHHTTT-----------------SS---CCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccc-----------------CC---CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322211110000000000 00 01222222222221 345678888899999999
Q ss_pred HHHHhcC---CCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee
Q 037144 390 ERLVTSD---KRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA 466 (502)
Q Consensus 390 ~~~l~~~---~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 466 (502)
.+.|+++ +++++. .+..++++|.-.+ . ..+.+.+.+.|.. +.+.
T Consensus 349 ~~~L~~~~~~~~~~~~-~~~~g~~~~~~~~----------------------------~---~~~~~~l~~~gI~-v~~~ 395 (420)
T 4f4e_A 349 VERLKAAGIERDFSFI-NAQRGMFSYSGLT----------------------------S---AQVDRLREEFGIY-AVST 395 (420)
T ss_dssp HHHHHHTTCSSCCTHH-HHSCSSEEECCCC----------------------------H---HHHHHHHHHHCEE-CCTT
T ss_pred HHHHHhcCCCCCceeE-CCCccEEEEeCCC----------------------------H---HHHHHHHHhCCEE-ecCC
Confidence 9999887 366554 3444555542111 1 2334444455754 3331
Q ss_pred eECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 467 IVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 467 ~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
.|++++. .+ +++|++++++|+++.
T Consensus 396 -------~Ris~~~-~~-~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 396 -------GRICVAA-LN-TRNLDVVANAIAAVL 419 (420)
T ss_dssp -------SEEEGGG-CC-TTTHHHHHHHHHHHH
T ss_pred -------CeEEEec-CC-HHHHHHHHHHHHHHh
Confidence 2999863 24 447999999998875
No 158
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.85 E-value=4.9e-20 Score=187.39 Aligned_cols=289 Identities=10% Similarity=0.020 Sum_probs=181.5
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
....++.+++++++|.+.+ .+++|+||++|+..++.+++... + ++.+|+.+...|.+...++...
T Consensus 87 ~~~~~l~~~la~~~~~~~~-------~v~~~~gg~~a~~~al~~~~~~~-~-------~~~vi~~~~~y~~~~~~~~~~~ 151 (395)
T 1vef_A 87 PMRGEFYRTLTAILPPELN-------RVFPVNSGTEANEAALKFARAHT-G-------RKKFVAAMRGFSGRTMGSLSVT 151 (395)
T ss_dssp HHHHHHHHHHHHTSCTTEE-------EEEEESSHHHHHHHHHHHHHHHH-S-------CCEEEEETTCCCCSSHHHHHTC
T ss_pred HHHHHHHHHHHHhcCCCcC-------EEEEcCcHHHHHHHHHHHHHHHh-C-------CCeEEEEcCCcCCCchhhhhhc
Confidence 4556677888899886543 58999999999999888765311 0 3344544444556666676766
Q ss_pred CCCCCC------------EEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHH
Q 037144 196 GIDRKN------------IRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVA 259 (502)
Q Consensus 196 Glg~~~------------v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~ 259 (502)
|. . +..++ ..|+++|+++|+++ +.+|+++..++++|.+.| +++|+++|
T Consensus 152 g~---~~~~~~~~p~~~~~~~~~-------~~d~~~l~~~i~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~ 215 (395)
T 1vef_A 152 WE---PKYREPFLPLVEPVEFIP-------YNDVEALKRAVDEE------TAAVILEPVQGEGGVRPATPEFLRAAREIT 215 (395)
T ss_dssp CC---HHHHGGGCSCSSCEEEEC-------TTCHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHH
T ss_pred CC---cccccccCCCCCCeeEeC-------CCcHHHHHHHhccC------EEEEEEeCccCCCCccCCCHHHHHHHHHHH
Confidence 65 3 33333 24899999988642 347777777778998877 99999999
Q ss_pred HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCC
Q 037144 260 KQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE 339 (502)
Q Consensus 260 ~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 339 (502)
++||+++|+|++|+++............++ .+|+++ +||+++.+.++|++++++. . .+.+... .+..
T Consensus 216 ~~~~~~li~Dea~~~~~~~g~~~~~~~~~~-~~d~~s--~sK~~~~g~~~G~~~~~~~-~-~~~l~~~-~~~~------- 282 (395)
T 1vef_A 216 QEKGALLILDEIQTGMGRTGKRFAFEHFGI-VPDILT--LAKALGGGVPLGVAVMREE-V-ARSMPKG-GHGT------- 282 (395)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEE--ECGGGGTTSSCEEEEEEHH-H-HHTSCTT-SSCC-------
T ss_pred HHcCCEEEEEecccCCccCCchhHhhhcCC-CCCEEE--EcccccCCCceEEEEehHH-H-HhhhccC-CcCC-------
Confidence 999999999999985322111111011122 468774 5999988888999998754 2 2222110 0000
Q ss_pred CcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC--eEEecCCCeeEEEEEeecC
Q 037144 340 PKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR--FEVAFPRNFSLVCFRVTPS 417 (502)
Q Consensus 340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~--~~l~~~~~~~~v~f~~~~~ 417 (502)
+. .........+..+++.+.. .++.++..++++++.+.|++++. +... ++..+++++.+...
T Consensus 283 -----------~~-~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~g~~~~~~~~~~ 346 (395)
T 1vef_A 283 -----------TF-GGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPSPKIREV-RGMGLMVGLELKEK 346 (395)
T ss_dssp -----------SS-TTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCTTEEEE-EEETTEEEEEESSC
T ss_pred -----------Cc-CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcCceEEE-EEEEEEEEEEEcCh
Confidence 00 0001112233344444322 34677888899999999988742 1111 22335666665421
Q ss_pred cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144 418 AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQ 496 (502)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~ 496 (502)
..++.+.|. +.|..+. + .+..++|++++ ..+++++++++++.|+
T Consensus 347 ------------------------------~~~l~~~l~~~~gi~v~-~---~~~~~iRi~~~-~~~~~~~i~~~~~~l~ 391 (395)
T 1vef_A 347 ------------------------------AAPYIARLEKEHRVLAL-Q---AGPTVIRFLPP-LVIEKEDLERVVEAVR 391 (395)
T ss_dssp ------------------------------SHHHHHHHHHHHCEECE-E---SSTTEEEECCC-TTCCHHHHHHHHHHHH
T ss_pred ------------------------------HHHHHHHHHHHCCeEEe-c---CCCCEEEEeCC-CCCCHHHHHHHHHHHH
Confidence 134566666 6686443 3 23568999974 5577889999999998
Q ss_pred HHH
Q 037144 497 EHL 499 (502)
Q Consensus 497 ~~~ 499 (502)
++.
T Consensus 392 ~~l 394 (395)
T 1vef_A 392 AVL 394 (395)
T ss_dssp HHH
T ss_pred HHh
Confidence 865
No 159
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.85 E-value=4e-20 Score=191.10 Aligned_cols=317 Identities=10% Similarity=0.075 Sum_probs=191.7
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCe----------
Q 037144 107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKL---------- 176 (502)
Q Consensus 107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~---------- 176 (502)
.|....+..++++++.+|+.+.+|.+... ...++|+||++|+..++.+... +++
T Consensus 78 ~y~~~~g~~~lr~~ia~~l~~~~g~~~~~-----~~i~~t~G~t~al~~~~~~l~~-----------~gd~~~~~~~~~~ 141 (444)
T 3if2_A 78 NYSNPQGDSAFIDALVGFFNRHYDWNLTS-----ENIALTNGSQNAFFYLFNLFGG-----------AFVNEHSQDKESK 141 (444)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHSSE-----------EEECC-------C
T ss_pred ccCCCCCCHHHHHHHHHHHHhhcCCCCCH-----HHEEEecCcHHHHHHHHHHHhC-----------CCccccccccccc
Confidence 45555667899999999999988864321 2689999999999887776532 232
Q ss_pred ----EEEeC-CCCchhHHHHH------HHcCCCCCCEEEEecCCC-C--CcccCHHHHHHHHHHHHhcCCccEEEEEecC
Q 037144 177 ----VVYSS-DQTHCAFQKAA------QIVGIDRKNIRAIKTTKS-S--SYGLSAESVLSQINLDVEAELIPLFLCATVG 242 (502)
Q Consensus 177 ----~v~~s-~~~H~s~~~aa------~~~Glg~~~v~~v~~~~~-~--~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g 242 (502)
.|+++ ...|..+..++ ...|. .++.++++.+ + ++.+|+++|++++.... ..+.+|+++.+
T Consensus 142 g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~---~~~~~v~i~~p 215 (444)
T 3if2_A 142 SVDKSILLPLTPEYIGYSDVHVEGQHFAAVLP---HIDEVTHDGEEGFFKYRVDFEALENLPALKE---GRIGAICCSRP 215 (444)
T ss_dssp EEEEEEEESSSSCCGGGTTCCSSSCCEEECCC---EEEEEEETTEEEEEEEECCHHHHHTCHHHHT---TCEEEEEEESS
T ss_pred cccceEEEeCCCCccchhhcccccchhhccCc---eEEecccccccCccccCCCHHHHHHHHHhcC---CCceEEEeCCC
Confidence 45554 66666655432 22355 7777887641 1 25799999999864321 12457888889
Q ss_pred CccccccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchh
Q 037144 243 TTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSC 319 (502)
Q Consensus 243 tt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~ 319 (502)
+|++|.+-| +++|+++|++||+++|+|++|+.+.... .+..........+.++.++||++..+.++|+++.. +..
T Consensus 216 ~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~-~~l 293 (444)
T 3if2_A 216 TNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNI-IYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVAD-AKV 293 (444)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEECC-HHH
T ss_pred CCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccc-ccccccccCCCCEEEEechhhccCCCCceEEEEEC-HHH
Confidence 999999988 8899999999999999999997532111 11111111235678889999986555667876653 332
Q ss_pred hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH----HHHHH-HHHHHHHHHHHHHHHHh
Q 037144 320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV----ANLRN-FIRSHVGMAKLFERLVT 394 (502)
Q Consensus 320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~----~g~~~-~~~~~~~la~~l~~~l~ 394 (502)
. ..+........ .....+...++...+.. ....+ +.+++.++++++.+.|.
T Consensus 294 ~-~~~~~~~~~~~-----------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 349 (444)
T 3if2_A 294 I-EAVSAMNAVVN-----------------------LAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLK 349 (444)
T ss_dssp H-HHHHHHHHHHH-----------------------SSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHhcc-----------------------CCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22211000000 00122333333322211 11222 44455666667777665
Q ss_pred c-CC--CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC--
Q 037144 395 S-DK--RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG-- 469 (502)
Q Consensus 395 ~-~~--~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-- 469 (502)
+ ++ ++++..+....++++.+..... ...++.+.+.+.|..+.++..+.
T Consensus 350 ~~l~~~~~~~~~~~~g~~~~~~~~~~~~---------------------------~~~~l~~~l~~~gi~v~~g~~~~~~ 402 (444)
T 3if2_A 350 QALGDYPLMIHKPEGAIFLWLWFKDLPI---------------------------STLDLYERLKAKGTLIVPSEYFFPG 402 (444)
T ss_dssp HHSSSSSEEEECCCBSSEEEEEETTCSS---------------------------CHHHHHHHHHHTTEECEEGGGSCTT
T ss_pred HhcccCCceEecCCccEEEEEEcCCCCC---------------------------CHHHHHHHHHHCCeEEecchhhcCC
Confidence 4 44 4666544434445555542111 02356667777786544433221
Q ss_pred --------CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 470 --------GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 470 --------g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+..++|++++. ++++|+++++.|.++.++
T Consensus 403 ~~~~~~~~~~~~iRis~~~---~~e~i~~~l~~l~~~~~~ 439 (444)
T 3if2_A 403 VDVSDYQHAHECIRMSIAA---DEQTLIDGIKVIGEVVRE 439 (444)
T ss_dssp CCCTTCSGGGSEEEEESSS---CHHHHHHHHHHHHHHHHH
T ss_pred CCCcccccCCCeEEEEEeC---CHHHHHHHHHHHHHHHHH
Confidence 12589999863 778999999999987654
No 160
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.85 E-value=1.9e-20 Score=192.92 Aligned_cols=308 Identities=14% Similarity=0.059 Sum_probs=199.2
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144 106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH 185 (502)
Q Consensus 106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (502)
..|....+..++++++.+|+.+.++.+.+ ..++|+|+++++.. +..... +++.|+++...|
T Consensus 92 ~~y~~~~g~~~l~~~ia~~~~~~~~~~~~-------~i~~t~G~~~al~~-l~~l~~-----------~gd~Vl~~~p~y 152 (432)
T 3ei9_A 92 SGYGAEQGAKPLRAAIAKTFYGGLGIGDD-------DVFVSDGAKCDISR-LQVMFG-----------SNVTIAVQDPSY 152 (432)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHTTTTCCGG-------GEEEESCHHHHHHH-HHHHHC-----------TTCCEEEEESCC
T ss_pred cCCCCCCCCHHHHHHHHHHHHccCCCCcc-------eEEECCChHHHHHH-HHHHcC-----------CCCEEEEeCCCC
Confidence 34555556789999999999875666544 68999999988754 332221 577888899999
Q ss_pred hhHHHHHHHcCCCC---------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC---Chh
Q 037144 186 CAFQKAAQIVGIDR---------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD---PLK 253 (502)
Q Consensus 186 ~s~~~aa~~~Glg~---------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id---pl~ 253 (502)
.++..+++..|... .+++.+|++.++++..|++. ...+.+|+++.++|++|.+- +++
T Consensus 153 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~~v~l~~p~NPtG~~~~~~~l~ 221 (432)
T 3ei9_A 153 PAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----------VGRTDIIFFCSPNNPTGAAATREQLT 221 (432)
T ss_dssp THHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----------CCCCSEEEEESSCTTTCCCCCHHHHH
T ss_pred HHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----------CCCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 99999999888421 26889998754334445332 01234677789999999985 477
Q ss_pred HHHHHHHHhCCEEEeecccccccccCccchhh--hcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchh------hhhhh
Q 037144 254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSC------LLSTL 324 (502)
Q Consensus 254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~--~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~------l~~~~ 324 (502)
+|+++|++||+++++|.+|+.+.... ..... +.+....+.+..+++|+++ .+..+|++++++... +...+
T Consensus 222 ~l~~la~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~ 300 (432)
T 3ei9_A 222 QLVEFAKKNGSIIVYDSAYAMYMSDD-NPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDF 300 (432)
T ss_dssp HHHHHHHHHTCEEEEECTTGGGCCSS-CCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHH
T ss_pred HHHHHHHHcCcEEEEccchHhhccCC-CCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHH
Confidence 77888999999999999998764431 11111 1122345678889999997 556688888765431 01111
Q ss_pred cCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 325 STNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
.....+... ....+...+++..+ +.+.+.++.++..++++++.+.|+++ ++++
T Consensus 301 ~~~~~~~~~-----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 356 (432)
T 3ei9_A 301 NRIICTCFN-----------------------GASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDV 356 (432)
T ss_dssp HHHHHHSCC-----------------------CSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCE
T ss_pred HHHhccccC-----------------------CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-Ccee
Confidence 100000000 01234444444444 34567888899999999999999988 8888
Q ss_pred ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeE--CCEEEEEEEe
Q 037144 402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIV--GGIYVLRFAA 478 (502)
Q Consensus 402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lR~~~ 478 (502)
..+....++.+.+.... ..++.+++.++ |..+.++..+ .+..++|+++
T Consensus 357 ~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~ 407 (432)
T 3ei9_A 357 YGGKNAPYVWVHFPNQS-----------------------------SWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSA 407 (432)
T ss_dssp EECSSSSEEEEECTTSC-----------------------------HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEEC
T ss_pred cCCCcceEEEEECCCCC-----------------------------HHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEe
Confidence 75445556666554211 23455555554 7654443332 2357999997
Q ss_pred cCCCCcHHHHHHHHHHHHHHHH
Q 037144 479 GNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 479 ~~~~t~~~di~~~~~~l~~~~~ 500 (502)
. +++++|+++++.|++.-+
T Consensus 408 ~---~~~e~l~~~l~rl~~~~~ 426 (432)
T 3ei9_A 408 F---GHRENILEACRRFKQLYK 426 (432)
T ss_dssp C---SCHHHHHHHHHHHHHHHT
T ss_pred c---CCHHHHHHHHHHHHHHhh
Confidence 4 478899999999987543
No 161
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.85 E-value=1.1e-19 Score=186.63 Aligned_cols=253 Identities=12% Similarity=0.093 Sum_probs=164.6
Q ss_pred HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH----HH
Q 037144 119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA----QI 194 (502)
Q Consensus 119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa----~~ 194 (502)
.++.+.+++++|.+. .+++++|++|+..++.+... +++.|+++...|.+....+ +.
T Consensus 61 ~~l~~~la~~~g~~~---------~v~~~sGt~A~~~~l~~~~~-----------~gd~vi~~~~~~~~~~~~~~~~~~~ 120 (421)
T 2ctz_A 61 DVLEKRLAALEGGKA---------ALATASGHAAQFLALTTLAQ-----------AGDNIVSTPNLYGGTFNQFKVTLKR 120 (421)
T ss_dssp HHHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEECSCCCHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHhCCCc---------eEEecCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHHHHHHHHHHH
Confidence 344455777777652 46677779999888776532 5778999999999877765 67
Q ss_pred cCCCCCCEEEE-ecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc-
Q 037144 195 VGIDRKNIRAI-KTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY- 272 (502)
Q Consensus 195 ~Glg~~~v~~v-~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~- 272 (502)
.|+ +++.+ +.+ |+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|++||+++|+|++|
T Consensus 121 ~g~---~~~~~~~~~-------d~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~ 184 (421)
T 2ctz_A 121 LGI---EVRFTSREE-------RPEEFLALTDEK------TRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFG 184 (421)
T ss_dssp TTC---EEEECCTTC-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGG
T ss_pred cCC---EEEEECCCC-------CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcc
Confidence 888 88888 642 889999998653 347888999999999999999999999999999999999
Q ss_pred ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc-ceEEEeeC-c-hh----hhhhhcCCcccccCccCCCCCccccc
Q 037144 273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD-CCCLWVKD-P-SC----LLSTLSTNPQYLKNEATDQEPKEQEV 345 (502)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~-~g~~~~r~-~-~~----l~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (502)
+.+.. ..... .++|++++++||+++.|.+ .|++++.+ . .. +.........|...............
T Consensus 185 ~~g~~-~~~~~------~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~ 257 (421)
T 2ctz_A 185 MGGYL-LRPLA------WGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFI 257 (421)
T ss_dssp GGGTS-CCGGG------GTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHH
T ss_pred ccccc-CCccc------cCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHH
Confidence 65532 21111 1689999999999998763 67777753 2 11 11111111111100000000000000
Q ss_pred CCCcc--cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-C-----------------C
Q 037144 346 GYKDW--QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF-P-----------------R 405 (502)
Q Consensus 346 ~~~~~--~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~-~-----------------~ 405 (502)
....+ ....+....++..|+.++. .+.+..++++..++++++.+.|+++|+++.+. + .
T Consensus 258 ~~~r~~~~~~~g~~~~~~~a~~~~~~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~ 335 (421)
T 2ctz_A 258 VKARVDGLRDQGQALGPFEAWVVLLG--METLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGK 335 (421)
T ss_dssp HHHHHTHHHHHCCCCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHcC--cchHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCC
Confidence 00000 0001223345555665543 45566778888899999999999999999863 2 2
Q ss_pred CeeEEEEEeec
Q 037144 406 NFSLVCFRVTP 416 (502)
Q Consensus 406 ~~~~v~f~~~~ 416 (502)
..++++|.+.+
T Consensus 336 ~g~ivsf~l~~ 346 (421)
T 2ctz_A 336 PGAVLTFGLKG 346 (421)
T ss_dssp CCSEEEEEETT
T ss_pred CceEEEEEeCC
Confidence 35688888753
No 162
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.85 E-value=2.6e-20 Score=184.75 Aligned_cols=157 Identities=11% Similarity=0.067 Sum_probs=121.3
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH----HHc
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA----QIV 195 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa----~~~ 195 (502)
++.+.+++++|.+. .+++++||+|+..++.+... +++.|+++...|.+....+ +..
T Consensus 2 ~l~~~la~~~g~~~---------~i~~~sG~~a~~~~~~~~~~-----------~g~~v~~~~~~~~~~~~~~~~~~~~~ 61 (331)
T 1pff_A 2 ALEGKIAKLEHAEA---------CAATASGMGAIAASVWTFLK-----------AGDHLISDDCLYGCTHALFEHQLRKF 61 (331)
T ss_dssp HHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEESCCCHHHHHHHHTHHHHT
T ss_pred hHHHHHHHHhCCCe---------EEEeCChHHHHHHHHHHhcC-----------CCCEEEEcCCCcchHHHHHHHHHHhc
Confidence 34566888888762 46666679998877765532 5677888999998877664 457
Q ss_pred CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH-hCCEEEeeccccc
Q 037144 196 GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ-FGIWVHVDAAYAG 274 (502)
Q Consensus 196 Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~-~g~~lhVDaA~g~ 274 (502)
|+ +++.+|. +|+++|+++++++ +.+|+++.++|++|.+.|+++|.++|++ +|+++++|++|+.
T Consensus 62 g~---~~~~~~~-------~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~ 125 (331)
T 1pff_A 62 GV---EVDFIDM-------AVPGNIEKHLKPN------TRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFAS 125 (331)
T ss_dssp TC---EEEEECT-------TSTTHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTH
T ss_pred CC---EEEEeCC-------CCHHHHHHhhcCC------CeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcc
Confidence 88 8888875 3778888888643 3478889999999999999999999999 9999999999987
Q ss_pred ccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchh
Q 037144 275 SACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSC 319 (502)
Q Consensus 275 ~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~ 319 (502)
+....+. . .++|.++.++||+++.|.+ +|+++.+++..
T Consensus 126 ~~~~~~~--~-----~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~ 165 (331)
T 1pff_A 126 PILTNPL--D-----LGVDIVVHSATKYINGHTDVVAGLVCSRADII 165 (331)
T ss_dssp HHHCCGG--G-----GTCSEEEEETTTTTSSSSSCCCEEEEECHHHH
T ss_pred cccCChh--h-----cCCcEEEEECccccCCCCCceEEEEEeCcHHH
Confidence 6654332 1 1689999999999998876 67777765243
No 163
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.85 E-value=3.1e-20 Score=192.30 Aligned_cols=307 Identities=11% Similarity=-0.004 Sum_probs=188.7
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh-HHH
Q 037144 112 PAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA-FQK 190 (502)
Q Consensus 112 p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~ 190 (502)
+....+|...++++++++|.+.. .++++|||+||..++.++++ +++.|+++...|.+ +..
T Consensus 87 ~~~~~~e~~a~~~la~~~g~~~~--------~v~~~sGs~a~~~a~~~~~~-----------~Gd~Vl~~~~~~~~~~~~ 147 (447)
T 3h7f_A 87 EHVDVVENLARDRAKALFGAEFA--------NVQPHSGAQANAAVLHALMS-----------PGERLLGLDLANGGHLTH 147 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHCC-----------TTCEEEEECGGGTCCGGG
T ss_pred HHHHHHHHHHHHHHHHHcCCCce--------EEEeCCHHHHHHHHHHHhcC-----------CCCEEEecCcccccccch
Confidence 33445665555999999998742 34478899999888776653 67788888888755 211
Q ss_pred --HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144 191 --AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 191 --aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV 268 (502)
.....|.+. .++.++++++ ++.+|+++|++++++.. |.+|+++.++++++. |+++|+++|++||+++|+
T Consensus 148 ~~~~~~~g~~~-~~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~ 218 (447)
T 3h7f_A 148 GMRLNFSGKLY-ENGFYGVDPA-THLIDMDAVRATALEFR-----PKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLV 218 (447)
T ss_dssp TCTTSHHHHSS-EEEEECCCTT-TCSCCHHHHHHHHHHHC-----CSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEE
T ss_pred hhhhhhcCCee-EEEEcCcCcc-cCCcCHHHHHHHHHhcC-----CeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEE
Confidence 112222200 4556666543 57899999999997532 236666666766654 999999999999999999
Q ss_pred ecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccCccCCCCCcccccCC
Q 037144 269 DAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKNEATDQEPKEQEVGY 347 (502)
Q Consensus 269 DaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~ 347 (502)
|++|+.+.......... ++.+|+++.++||++++|.+ |+++.++ .... .+.. ..++...
T Consensus 219 Dea~~~g~~~~g~~~~~---~~~~di~~~s~sK~l~G~~g-G~i~~~~-~~~~-~l~~~~~~~~~~-------------- 278 (447)
T 3h7f_A 219 DMAHFAGLVAAGLHPSP---VPHADVVSTTVHKTLGGGRS-GLIVGKQ-QYAK-AINSAVFPGQQG-------------- 278 (447)
T ss_dssp ECTTTHHHHHTTSSCCS---TTTCSEEEEESSGGGCCCSC-EEEEECG-GGHH-HHHHHHTTTTCS--------------
T ss_pred ECCchhhhhcCCCCCCC---CCCCcEEEecCCcCCCCCCe-EEEEECH-HHHH-HHhhhcCCcccC--------------
Confidence 99986544322211111 23689999999999987765 7776654 2221 1110 0011100
Q ss_pred CcccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecC-CCeeEEEEEeecCcchh
Q 037144 348 KDWQITLCRR-FRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFP-RNFSLVCFRVTPSAVMD 421 (502)
Q Consensus 348 ~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~-~~~~~v~f~~~~~~~~~ 421 (502)
+.. ....++..++.....+++.++.++..++++++.+.|++. +|++++.. ...+++.+.+.+.+..
T Consensus 279 -------~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~- 350 (447)
T 3h7f_A 279 -------GPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPLD- 350 (447)
T ss_dssp -------SCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSCC-
T ss_pred -------CccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCCC-
Confidence 000 012344445555445678889999999999999999876 57888742 3445555555433210
Q ss_pred hhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE---ee---eECCEEEEEEEecCC---CCcHHHHHHHH
Q 037144 422 KLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT---HA---IVGGIYVLRFAAGNS---MTMESHVRAAW 492 (502)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~---~~~g~~~lR~~~~~~---~t~~~di~~~~ 492 (502)
...+.+.+.+.|.++.. +. .......+|++.... ..+++++++++
T Consensus 351 --------------------------~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~ 404 (447)
T 3h7f_A 351 --------------------------GQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVA 404 (447)
T ss_dssp --------------------------HHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHH
T ss_pred --------------------------HHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHH
Confidence 12333444445754321 11 112245699986422 14678999999
Q ss_pred HHHHHHHH
Q 037144 493 TVVQEHLE 500 (502)
Q Consensus 493 ~~l~~~~~ 500 (502)
+.|.++.+
T Consensus 405 ~~l~~~l~ 412 (447)
T 3h7f_A 405 DIIATALA 412 (447)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99988764
No 164
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.84 E-value=6e-20 Score=187.87 Aligned_cols=218 Identities=9% Similarity=0.067 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH---
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ--- 193 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~--- 193 (502)
...++.+++++++|.+ ..++++||++|+..++.+... +++.|+++...|.+....++
T Consensus 82 ~~~~l~~~la~~~g~~---------~~~~~~sG~~Ai~~al~~l~~-----------~Gd~Vi~~~~~y~~~~~~~~~~~ 141 (414)
T 3ndn_A 82 TVSVFEERLRLIEGAP---------AAFATASGMAAVFTSLGALLG-----------AGDRLVAARSLFGSCFVVCSEIL 141 (414)
T ss_dssp HHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHTTCC-----------TTCEEEEESCCCHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCccchHHHHHHHHH
Confidence 3445566788888864 468999999998777765532 67788888889988766654
Q ss_pred -HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 194 -IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 194 -~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
..|+ +++.+|.+ |+++|+++|++++ .+|+++.++|++|.+.|+++|+++|+++|+++++|++|
T Consensus 142 ~~~g~---~~~~v~~~-------d~~~l~~ai~~~t------~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~ 205 (414)
T 3ndn_A 142 PRWGV---QTVFVDGD-------DLSQWERALSVPT------QAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVF 205 (414)
T ss_dssp HHTTC---EEEEECTT-------CHHHHHHHTSSCC------SEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTT
T ss_pred HHcCc---EEEEeCCC-------CHHHHHHhcCCCC------eEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCC
Confidence 4888 89888864 8899999986543 37888999999999999999999999999999999999
Q ss_pred ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcc
Q 037144 273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDW 350 (502)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 350 (502)
+.+....+. . .++|.++.+++|+++.+.. .|+++.++. .+...+.......
T Consensus 206 ~~~~~~~~~--~-----~g~div~~S~sK~l~~~G~~~~G~vv~~~~-~~~~~l~~~~~~~------------------- 258 (414)
T 3ndn_A 206 ATPLLQQGF--P-----LGVDVVVYSGTKHIDGQGRVLGGAILGDRE-YIDGPVQKLMRHT------------------- 258 (414)
T ss_dssp THHHHCCCG--G-----GTCSEEEEETTTTTTCSSCCCCEEEEECHH-HHTTHHHHHHHHH-------------------
T ss_pred cccccCCch--h-----cCCCeEeccCCccccCCCCceEEEEEECHH-HHHHHHHHHHHHc-------------------
Confidence 865443332 1 1689999999999976542 676666543 2221111000000
Q ss_pred cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144 351 QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF 403 (502)
Q Consensus 351 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~ 403 (502)
+....++..|.+++ +.+.+..++++..++++++.+.|++.|+++.+.
T Consensus 259 ----g~~~~~~~a~~~~~--~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~ 305 (414)
T 3ndn_A 259 ----GPAMSAFNAWVLLK--GLETLAIRVQHSNASAQRIAEFLNGHPSVRWVR 305 (414)
T ss_dssp ----CCCCCHHHHHHHHH--HGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEE
T ss_pred ----CCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEE
Confidence 11124455666665 446678888999999999999999999887543
No 165
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.84 E-value=6.5e-20 Score=186.90 Aligned_cols=361 Identities=10% Similarity=0.015 Sum_probs=215.5
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCCCc
Q 037144 56 VETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLPKS 134 (502)
Q Consensus 56 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~ 134 (502)
.-.+.+.+...-.++..+.....|+.+...++..+. +.+.+..... .....|....+..++.+.+.+|+...+|.+-.
T Consensus 15 i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~-v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~ 93 (401)
T 7aat_A 15 ILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNC-VRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFK 93 (401)
T ss_dssp HHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHH-HHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHH-HHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccc
Confidence 344444444433333333333334444433333333 3443333332 23445666667788999999998877775211
Q ss_pred cCcCCCCcEEE--cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCC
Q 037144 135 FLFSGNGGGVI--QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSS 212 (502)
Q Consensus 135 ~~~~~~~~g~~--t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~ 212 (502)
. ...++ |+||++|+..++.+.+.. .+ +++.|+++..+|.++...++..|. +++.+|++..++
T Consensus 94 ~-----~~i~~v~t~G~~~al~~~~~~l~~~-~~-------~gd~Vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~ 157 (401)
T 7aat_A 94 S-----GRYVTVQGISGTGSLRVGANFLQRF-FK-------FSRDVYLPKPSWGNHTPIFRDAGL---QLQAYRYYDPKT 157 (401)
T ss_dssp T-----TCEEEEEEEHHHHHHHHHHHHHHHH-CT-------TCCEEEEEESCCTTHHHHHHHTTC---EEEEEECEETTT
T ss_pred c-----CceEEEecCcchHHHHHHHHHHHHh-cc-------CCCEEEEcCCCchhHHHHHHHcCC---eeEeeeeecccc
Confidence 0 14666 999999998887665421 11 577888999999999999999999 999999864345
Q ss_pred cccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc---CChhHHHHHHHHhCCEEEeecccccccccCcc-----chh
Q 037144 213 YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPE-----FRH 284 (502)
Q Consensus 213 ~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~-----~~~ 284 (502)
+.+|++.+++.+++. ...+.+|+++.++|+||.+ +++++|+++|++||+++++|.+|+.+...... ...
T Consensus 158 ~~~d~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 234 (401)
T 7aat_A 158 CSLDFTGAMEDISKI---PEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRH 234 (401)
T ss_dssp TEECHHHHHHHHTTS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHH
T ss_pred CccCHHHHHHHHHhC---CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHH
Confidence 799999999888652 1234688889999999976 56889999999999999999999776543210 111
Q ss_pred hhcCCCCCCeeEEccCCcCCCC-CcceEEEee--CchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCch
Q 037144 285 FIDGVECVDSFSFNPHKWLFTT-LDCCCLWVK--DPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSL 361 (502)
Q Consensus 285 ~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r--~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al 361 (502)
. .....-..++.++||.++.| ..+|++++. ++............+..... . ...+.
T Consensus 235 ~-~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~-~~~~~ 293 (401)
T 7aat_A 235 F-IEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMY-------------------S-NPPMN 293 (401)
T ss_dssp H-HHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHH-------------------S-SCCHH
T ss_pred H-HhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhcc-------------------C-CCChH
Confidence 1 11223446778899999744 347887762 33211101000000000000 0 00122
Q ss_pred HHHHHHHHh--c------HHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCCeeEEEEEeecCcchhhhhhcccCC
Q 037144 362 KLWVVIRNF--G------VANLRNFIRSHVGMAKLFERLVTSDK---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNG 430 (502)
Q Consensus 362 ~~~~~l~~~--g------~~g~~~~~~~~~~la~~l~~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 430 (502)
....+...+ + .+.+.+..+++.++++++.+.|+++. ++++. +|..+++.|.-.+
T Consensus 294 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~-------------- 358 (401)
T 7aat_A 294 GARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHI-TDQIGMFCFTGLK-------------- 358 (401)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHH-HHCCSSEEECCCC--------------
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcee-cCCcceEEecCCC--------------
Confidence 222222222 1 34467778888899999999998862 34443 3445555552111
Q ss_pred CcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 431 TYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
. ..+...+.+.|.. +.+ .+|++++. .+++ +|+++++.|+++.
T Consensus 359 --------------~---~~~~~ll~~~gi~-v~~-------~~Ris~~~-~~~~-~i~~~~~~l~~~~ 400 (401)
T 7aat_A 359 --------------P---EQVERLTKEFSIY-MTK-------DGRISVAG-VASS-NVGYLAHAIHQVT 400 (401)
T ss_dssp --------------H---HHHHHHHHHHCEE-CCT-------TCEEEGGG-CCTT-THHHHHHHHHHHH
T ss_pred --------------H---HHHHHHHHhCCEe-ccC-------CCeEEecc-CChh-hHHHHHHHHHHHh
Confidence 1 1222222344653 332 26999864 3555 5999999998875
No 166
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.84 E-value=1.7e-19 Score=183.19 Aligned_cols=215 Identities=13% Similarity=0.103 Sum_probs=153.4
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH----HH
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA----AQ 193 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a----a~ 193 (502)
..++.+++++++|.+ ..+++++|++|+..++.+... +++.|+++...|.+.... ++
T Consensus 61 ~~~l~~~la~~~g~~---------~~i~~~sG~~ai~~~~~~~~~-----------~gd~vl~~~~~y~~~~~~~~~~~~ 120 (389)
T 3acz_A 61 VEQFEEMVCSIEGAA---------GSAAFGSGMGAISSSTLAFLQ-----------KGDHLIAGDTLYGCTVSLFTHWLP 120 (389)
T ss_dssp HHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHTTTCC-----------TTCEEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC---------eEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHHHHHHHHHH
Confidence 334556678888875 257778889999877765432 567888888899886665 57
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccc
Q 037144 194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 273 (502)
Q Consensus 194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g 273 (502)
..|+ +++.+|. .|+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|+++|+++++|++|+
T Consensus 121 ~~g~---~~~~v~~-------~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~ 184 (389)
T 3acz_A 121 RFGI---EVDLIDT-------SDVEKVKAAWKPN------TKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFT 184 (389)
T ss_dssp HTTC---EEEEECT-------TCHHHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTT
T ss_pred HcCC---EEEEECC-------CCHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCc
Confidence 7898 8888885 3889999988653 3488889999999999999999999999999999999998
Q ss_pred cccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCccc
Q 037144 274 GSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQ 351 (502)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 351 (502)
.+....+ .. .++|+++.++||++++|.+ +|+++.++..... .+.....+..
T Consensus 185 ~~~~~~~-~~------~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~-~l~~~~~~~g------------------- 237 (389)
T 3acz_A 185 SPCFLKP-LE------LGADIALHSVSKYINGHGDVIGGVSSAKTAEDIA-TIKFYRKDAG------------------- 237 (389)
T ss_dssp CTTTCCG-GG------TTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHH-HHHHHHHHHC-------------------
T ss_pred cccccCc-cc------cCCeEEEECChhhccCCCCceeEEEEECcHHHHH-HHHHHHHhcC-------------------
Confidence 7654222 11 1789999999999998877 6888877623322 1111000000
Q ss_pred ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 352 ITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 352 ~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
.....+..|.+++.+ +.+..++++..++++.+.+.|++.+.++-
T Consensus 238 ----~~~~~~~~~~~~~~l--~~l~~r~~~~~~~~~~l~~~l~~~~~v~~ 281 (389)
T 3acz_A 238 ----SLMAPMDAFLCARGM--KTLPIRMQIHMENGLKVAKFLEQHEKIVK 281 (389)
T ss_dssp ----CCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHCTTEEE
T ss_pred ----CCCCHHHHHHHHcCc--cHHHHHHHHHHHHHHHHHHHHHcCCCeeE
Confidence 011335566666554 44566677788888888888888765543
No 167
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.84 E-value=5.3e-20 Score=188.24 Aligned_cols=326 Identities=13% Similarity=0.064 Sum_probs=205.2
Q ss_pred HHHHHHHHhhc-CC-CCcccccChhhHHHHHHHHHHHHHhcCC--CCccCcCCCCcEEE--cCCchHHHHHHHHHHHHHH
Q 037144 91 GIVGEMLSSGF-NV-VGLDWISSPAAVELENIVMDWLGQMLDL--PKSFLFSGNGGGVI--QGTTCEALLCTLTAARDRV 164 (502)
Q Consensus 91 ~~~~~~l~~~~-n~-~~~~~~~~p~~~~le~~~~~~l~~l~g~--~~~~~~~~~~~g~~--t~ggt~a~~~al~~a~~~~ 164 (502)
..+.+.+...+ +. ....|...++..++++.+.+|+....|. +.+ ..++ |+||++|+..++..++..
T Consensus 51 ~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~-------~v~~~~t~gg~~a~~~~~~~~~~~- 122 (412)
T 1ajs_A 51 PVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEK-------RVGGVQSLGGTGALRIGAEFLARW- 122 (412)
T ss_dssp HHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT-------CEEEEEEEHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCC-------cEEEEECCCcHHHHHHHHHHHHHh-
Confidence 44566665555 22 2334655566788888888888665553 222 5888 999999998876543321
Q ss_pred HHHhCccCCCC-----eEEEeCCCCchhHHHHHHHcCCCCCC-EEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEE
Q 037144 165 LKKIGRENISK-----LVVYSSDQTHCAFQKAAQIVGIDRKN-IRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLC 238 (502)
Q Consensus 165 ~~~~~~~~~~~-----~~v~~s~~~H~s~~~aa~~~Glg~~~-v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv 238 (502)
. ++ +.|+++..+|.++...++..|. + ++.+|++.++++.+|+++|++++++. +.+..+|+
T Consensus 123 -~-------~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~ 188 (412)
T 1ajs_A 123 -Y-------NGTNNKDTPVYVSSPTWENHNGVFTTAGF---KDIRSYRYWDTEKRGLDLQGFLSDLENA---PEFSIFVL 188 (412)
T ss_dssp -S-------SSSSCCCSCEEEEESCCTHHHHHHHHTTC---SCEEEEECEETTTTEECHHHHHHHHHHS---CTTCEEEE
T ss_pred -C-------cCcCCCCCeEEEcCCCcHHHHHHHHHcCC---ceeEEEeeecCCCCccCHHHHHHHHHhC---CCCcEEEE
Confidence 1 44 6788888899999999999999 9 99999853235789999999999752 11235777
Q ss_pred EecCCcccccc---CChhHHHHHHHHhCCEEEeecccccccccC---c--cchhhhcCCCCCCeeEEccCCcCCC-CCcc
Q 037144 239 ATVGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACIC---P--EFRHFIDGVECVDSFSFNPHKWLFT-TLDC 309 (502)
Q Consensus 239 ~t~gtt~~G~i---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~---~--~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~ 309 (502)
.+.++|+||.+ +++++|+++|++||+++++|++|.++.... + .... +.....-+.+..++||.++. ...+
T Consensus 189 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~ri 267 (412)
T 1ajs_A 189 HACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRY-FVSEGFELFCAQSFSKNFGLYNERV 267 (412)
T ss_dssp ESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHH-HHHTTCCEEEEEECTTTSCCGGGCE
T ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHH-HhccCCcEEEEEecccccCCCCcce
Confidence 89999999998 456789999999999999999987765421 1 1111 11111223678889999875 3447
Q ss_pred eEEEee--CchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--c------HHHHHHHH
Q 037144 310 CCLWVK--DPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--G------VANLRNFI 379 (502)
Q Consensus 310 g~~~~r--~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g------~~g~~~~~ 379 (502)
|++++. ++..+.........+... +..+ ...+..+++...+ + .+.++++.
T Consensus 268 G~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 327 (412)
T 1ajs_A 268 GNLTVVAKEPDSILRVLSQMQKIVRV-----------------TWSN---PPAQGARIVARTLSDPELFHEWTGNVKTMA 327 (412)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHHT-----------------TTSS---CCSHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHhc-----------------ccCC---CChHHHHHHHHHHcCcchhHHHHHHHHHHH
Confidence 888872 443211111000000000 0000 0223333333332 1 24677888
Q ss_pred HHHHHHHHHHHHHHhcCC---CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH
Q 037144 380 RSHVGMAKLFERLVTSDK---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN 456 (502)
Q Consensus 380 ~~~~~la~~l~~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 456 (502)
++..++++++.+.|++++ ++++. .+..+++.|.-.+ ...+...+.
T Consensus 328 ~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~-------------------------------~~~~~~~l~ 375 (412)
T 1ajs_A 328 DRILSMRSELRARLEALKTPGTWNHI-TDQIGMFSFTGLN-------------------------------PKQVEYLIN 375 (412)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSCCHHH-HHCCSSEEECCCC-------------------------------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCeeEE-cCCCceEEEeCCC-------------------------------HHHHHHHHH
Confidence 899999999999999874 36654 3344444442111 122333444
Q ss_pred hcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 457 VSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 457 ~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+.|.. +.+ .+|++++. .++++++++++.|+++.++
T Consensus 376 ~~gv~-v~~-------~~Ris~~~--~~~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 376 QKHIY-LLP-------SGRINMCG--LTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp TTCEE-CCT-------TSEEEGGG--CCTTTHHHHHHHHHHHHHH
T ss_pred hCCEE-ecC-------CcEEEeee--CCHHHHHHHHHHHHHHHHh
Confidence 56754 333 26999873 3566999999999988765
No 168
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.83 E-value=2.5e-19 Score=181.91 Aligned_cols=296 Identities=13% Similarity=0.075 Sum_probs=182.3
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G 196 (502)
...++.+++++++|. + ..++++|||+|+..++.+++.......+.. .+++.|++...+|++....+..++
T Consensus 79 ~~~~l~~~la~~~g~-~--------~v~~~~~gt~a~~~al~~~~~~~~~~~~~~-~~~~~vi~~~~~~~~~~~~~~~~~ 148 (392)
T 3ruy_A 79 QLGPWYEKVAKLTNK-E--------MVLPMNTGAEAVETAIKTARRWAYDVKKVE-ANRAEIIVCEDNFHGRTMGAVSMS 148 (392)
T ss_dssp THHHHHHHHHHHHTC-S--------EEEEESSHHHHHHHHHHHHHHHHHHTSCCC-TTCCEEEEETTCCCCSSHHHHHTC
T ss_pred HHHHHHHHHHHhcCC-C--------EEEEeCcHHHHHHHHHHHHHHhhhhccCCC-CCCcEEEEEcCCcCCCCHhhhhcc
Confidence 345566788888882 2 589999999999999988765321111110 135577777777765544443332
Q ss_pred CC----------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHh
Q 037144 197 ID----------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQF 262 (502)
Q Consensus 197 lg----------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~ 262 (502)
.. ...+..++. .|+++|+++|+++ +.+|+++.++|++|.+.| +++|+++|++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~ 215 (392)
T 3ruy_A 149 SNEEYKRGFGPMLPGIIVIPY-------GDLEALKAAITPN------TAAFILEPIQGEAGINIPPAGFLKEALEVCKKE 215 (392)
T ss_dssp SCTTTTTTCCSCCSSEEEECT-------TCHHHHHHHCCTT------EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTT
T ss_pred CChhhccccCCCCCCCeeeCc-------ccHHHHHHHhccC------eEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc
Confidence 21 012444432 2899999998733 458888889999999998 99999999999
Q ss_pred CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144 263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK 341 (502)
Q Consensus 263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 341 (502)
|+++|+|++|+++............++ ..|.++++ |++++. ...|+++.++ ... +.+.. ....
T Consensus 216 ~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~~~S--K~l~gG~~~~G~~~~~~-~~~-~~~~~---~~~~-------- 279 (392)
T 3ruy_A 216 NVLFVADEIQTGLGRTGKVFACDWDNV-TPDMYILG--KALGGGVFPISCAAANR-DIL-GVFEP---GSHG-------- 279 (392)
T ss_dssp TCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTTSCCEEEEECH-HHH-TTCCT---TSSC--------
T ss_pred CCEEEEeechhCCCccccchhhhccCC-CCCEEEEc--hhhhCChhhhEEEEECH-HHH-hhhcc---CCcC--------
Confidence 999999999975432211111111122 46888775 987653 4578877753 222 11111 0000
Q ss_pred ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC--CCeEEecCCCeeEEEEEeecCcc
Q 037144 342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD--KRFEVAFPRNFSLVCFRVTPSAV 419 (502)
Q Consensus 342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~--~~~~l~~~~~~~~v~f~~~~~~~ 419 (502)
. .+ ....+.+.++...+.....++..++..++++++.+.|+++ +.+... ++..+++.|.+...
T Consensus 280 -~-----~~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~g~~~~~~~~~~-- 344 (392)
T 3ruy_A 280 -S-----TF------GGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDNPMITEV-RGKGLFIGIELNEP-- 344 (392)
T ss_dssp -C-----SS------TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCCCTTEEEE-EEETTEEEEEESSC--
T ss_pred -C-----CC------CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhcCCCceEE-EeeeeEEEEEEcch--
Confidence 0 00 1123333333333221112567888899999999999887 334443 33455666665321
Q ss_pred hhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 420 MDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
..++.+.|.++|.. +.+. +..++|++++ ..+++++++++++.|+++.
T Consensus 345 ----------------------------~~~l~~~l~~~gi~-v~~~---~~~~iRi~~~-~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 345 ----------------------------ARPYCEQLKAAGLL-CKET---HENVIRIAPP-LVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp ----------------------------SHHHHHHHHTTTEE-CCCB---TTTEEEECCC-TTCCHHHHHHHHHHHHHHH
T ss_pred ----------------------------HHHHHHHHHHCCcE-EecC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHh
Confidence 23567777777864 3332 3568999975 4567789999999998875
No 169
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.83 E-value=4.7e-20 Score=188.69 Aligned_cols=356 Identities=10% Similarity=-0.012 Sum_probs=214.8
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHh-hcCCC-CcccccChhhHHHHHHHHHHHHHhcCCC-
Q 037144 56 VETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSS-GFNVV-GLDWISSPAAVELENIVMDWLGQMLDLP- 132 (502)
Q Consensus 56 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~-~~n~~-~~~~~~~p~~~~le~~~~~~l~~l~g~~- 132 (502)
...+.+.+.+.-.+......+..++++..... ++..+.+.+.. .+... ...|...++..++++.+.+|+....|.+
T Consensus 16 ~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~-~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~ 94 (412)
T 1yaa_A 16 LFGIKQRYGQDQRATKVDLGIGAYRDDNGKPW-VLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDAL 94 (412)
T ss_dssp THHHHHHHHTCCCSSCEECSSCCCBCTTSCBC-CCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCC-CcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCC
Confidence 44555555432112223333333333322222 33446666666 55432 3346555667889999988887766632
Q ss_pred -CccCcCCCCcEEE--cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEec-C
Q 037144 133 -KSFLFSGNGGGVI--QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKT-T 208 (502)
Q Consensus 133 -~~~~~~~~~~g~~--t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~-~ 208 (502)
.+ ..++ |+||++|+..++...+.. . +++.|+++..+|.++...++..|+ +++.+|+ +
T Consensus 95 ~~~-------~i~~~~t~g~~~a~~~~~~~~~~~--~-------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~ 155 (412)
T 1yaa_A 95 QED-------RVISVQSLSGTGALHISAKFFSKF--F-------PDKLVYLSKPTWANHMAIFENQGL---KTATYPYWA 155 (412)
T ss_dssp HTT-------CEEEEEEEHHHHHHHHHHHHHHHH--C-------TTCCEEEEESCCTTHHHHHHTTTC---CEEEEECEE
T ss_pred Ccc-------eEEEEeccchHhHHHHHHHHHHHh--C-------CCCEEEEeCCCCccHHHHHHHcCc---eEEEEeeec
Confidence 22 5788 999999997774433221 1 456788888899999999999999 9999998 4
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccccccC---c--
Q 037144 209 KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIC---P-- 280 (502)
Q Consensus 209 ~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~---~-- 280 (502)
++ ++.+|+++|++++++.. ....+++.+.++|+||.+-+ +++|+++|++||+++++|++|+.+.... +
T Consensus 156 ~~-~~~~d~~~l~~~l~~~~---~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 231 (412)
T 1yaa_A 156 NE-TKSLDLNGFLNAIQKAP---EGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAY 231 (412)
T ss_dssp TT-TTEECHHHHHHHHHHSC---TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTH
T ss_pred CC-CCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhH
Confidence 32 46899999999997531 11245566899999999854 6688999999999999999997654321 1
Q ss_pred cchhhhcCCCC---CCeeEEccCCcCCC-CCcceEEE--e----eCchh---hhhhhcCCcccccCccCCCCCcccccCC
Q 037144 281 EFRHFIDGVEC---VDSFSFNPHKWLFT-TLDCCCLW--V----KDPSC---LLSTLSTNPQYLKNEATDQEPKEQEVGY 347 (502)
Q Consensus 281 ~~~~~~~~~~~---aDsi~~~~hK~l~~-p~~~g~~~--~----r~~~~---l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 347 (502)
..... ..... -+.++.++||.++. ....|+++ . +++.. +.+.+.. .....
T Consensus 232 ~~~~~-~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~------------- 294 (412)
T 1yaa_A 232 AVRLG-VEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAK---IIRSE------------- 294 (412)
T ss_dssp HHHHH-HHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHH---HHHTT-------------
T ss_pred HHHHH-HhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHH---HHhhc-------------
Confidence 11111 11111 24567789999874 33468877 4 23331 1111111 00000
Q ss_pred CcccccCCCCCCchHHHHHHHHh--c------HHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCCeeEEEEEeec
Q 037144 348 KDWQITLCRRFRSLKLWVVIRNF--G------VANLRNFIRSHVGMAKLFERLVTSDK---RFEVAFPRNFSLVCFRVTP 416 (502)
Q Consensus 348 ~~~~~~~sr~~~al~~~~~l~~~--g------~~g~~~~~~~~~~la~~l~~~l~~~~---~~~l~~~~~~~~v~f~~~~ 416 (502)
.+ ....+..+++.+.+ + .++++++.++..++++++.+.|++++ ++++. ++..+++.|.-.+
T Consensus 295 ------~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~ 366 (412)
T 1yaa_A 295 ------VS-NPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHI-VNQCGMFSFTGLT 366 (412)
T ss_dssp ------TS-SCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHH-HHCCSSEEECCCC
T ss_pred ------cC-CCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeee-ccCceEEEeeCCC
Confidence 00 00222333333332 1 24678888889999999999998864 36654 3444555542111
Q ss_pred CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144 417 SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQ 496 (502)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~ 496 (502)
...+...+.+.|.. +.+ ++|++++. .+++++++++++|+
T Consensus 367 -------------------------------~~~~~~~l~~~gi~-v~~-------~~Ris~~~--~~~~~i~~~~~~l~ 405 (412)
T 1yaa_A 367 -------------------------------PQMVKRLEETHAVY-LVA-------SGRASIAG--LNQGNVEYVAKAID 405 (412)
T ss_dssp -------------------------------HHHHHHHHHHHCEE-CCT-------TSEEEGGG--CCTTTHHHHHHHHH
T ss_pred -------------------------------HHHHHHHHHhCCEE-ecc-------CcEEEEcc--CCHhHHHHHHHHHH
Confidence 12233333345754 333 47999863 35669999999999
Q ss_pred HHHHh
Q 037144 497 EHLEA 501 (502)
Q Consensus 497 ~~~~~ 501 (502)
++.+.
T Consensus 406 ~~~~~ 410 (412)
T 1yaa_A 406 EVVRF 410 (412)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88764
No 170
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.83 E-value=1.5e-19 Score=186.51 Aligned_cols=330 Identities=11% Similarity=0.054 Sum_probs=191.5
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchh
Q 037144 108 WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCA 187 (502)
Q Consensus 108 ~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s 187 (502)
|..++...++++ .+++++|.+ ..+++++||+|+..++.+.+...+.+.. ..+++.|+++..+|.+
T Consensus 58 ~~~~~~~~~l~~----~la~~~g~~---------~~i~~~sGt~a~~~al~~l~~~~~~~~~--~~~gd~Vi~~~~~~~~ 122 (437)
T 3bb8_A 58 LTTGRFNDAFEK----KLGEYLGVP---------YVLTTTSGSSANLLALTALTSPKLGVRA--LKPGDEVITVAAGFPT 122 (437)
T ss_dssp CBSCHHHHHHHH----HHHHHHTCS---------EEEEESCHHHHHHHHHHHTTCGGGGGGS--CCTTCEEEECSSSCHH
T ss_pred cCCChHHHHHHH----HHHHHHCCC---------cEEEeCCHHHHHHHHHHHhhhccccccc--CCCcCEEEECCCCcHH
Confidence 444555555554 466777765 2688999999998887765210000000 0156789999999999
Q ss_pred HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144 188 FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 188 ~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh 267 (502)
+..++...|+ +++.+|++++ ++.+|+++|+++|++++ .+|+++. .+|...|+++|.++|+++|+++|
T Consensus 123 ~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~i~~~~------~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li 189 (437)
T 3bb8_A 123 TVNPTIQNGL---IPVFVDVDIP-TYNVNASLIEAAVSDKT------KAIMIAH---TLGNLFDLAEVRRVADKYNLWLI 189 (437)
T ss_dssp HHHHHHHTTC---EEEECCEETT-TTEECGGGHHHHCCTTE------EEEEEEC---GGGCCCCHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHcCC---EEEEEeccCc-cCCcCHHHHHHhcCCCC------eEEEEeC---CCCChhcHHHHHHHHHHcCCEEE
Confidence 9999999999 9999998753 57999999999986533 3666654 56888999999999999999999
Q ss_pred eecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccC---c-cCC-----C
Q 037144 268 VDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKN---E-ATD-----Q 338 (502)
Q Consensus 268 VDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~---~-~~~-----~ 338 (502)
+|+||+.+... + .+.. + ...|.++++++|....|.+.|.+++.++..+...+.....+-.. . ... .
T Consensus 190 ~D~a~~~g~~~-~-~~~~--~-~~~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (437)
T 3bb8_A 190 EDCCDALGSTY-D-GKMA--G-TFGDIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKR 264 (437)
T ss_dssp EECTTCTTCEE-T-TEET--T-SSSSEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC-------------
T ss_pred EECccccCceE-C-Ceec--c-cccCEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccc
Confidence 99999855443 1 1111 1 13687777754433334445555555543332221110011100 0 000 0
Q ss_pred C--Cc-ccccCC-Cccc---ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC------
Q 037144 339 E--PK-EQEVGY-KDWQ---ITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPR------ 405 (502)
Q Consensus 339 ~--~~-~~~~~~-~~~~---~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~------ 405 (502)
. .. +....+ ...+ ....-+...+....++..+ +.+.+.+++..++++++.+.|++++++.++...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~ 342 (437)
T 3bb8_A 265 FGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQL--ERIEEFVEKRKANFKYLKDALQSCADFIELPEATENSDP 342 (437)
T ss_dssp ---CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEEC
T ss_pred cccccccccccccccccccccCcccCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCce
Confidence 0 00 000000 0000 0001111233333334332 445677778899999999999998887765311
Q ss_pred CeeEEEEEeecC-cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee--------EC--C----
Q 037144 406 NFSLVCFRVTPS-AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI--------VG--G---- 470 (502)
Q Consensus 406 ~~~~v~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~--g---- 470 (502)
....+.+.+... +. ....+.+.|.++|+..-.... +. +
T Consensus 343 ~~~~~~~~~~~~~~~---------------------------~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~ 395 (437)
T 3bb8_A 343 SWFGFPITLKEDSGV---------------------------SRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVV 395 (437)
T ss_dssp CCSSEEEEECGGGSS---------------------------CHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEEC
T ss_pred eeEEEEEEECCcCcC---------------------------cHHHHHHHHHHCCCceeccCCcccccCchhhccCcccc
Confidence 111233333211 00 024567777777864322100 00 0
Q ss_pred ----------EEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 471 ----------IYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 471 ----------~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
...+|+++ ++.++++||++++++|+++.+
T Consensus 396 ~~~~~~~~~~~~~lrl~~-~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 396 GELTNTDRIMNQTFWIGI-YPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp SCCHHHHHHHHHEEEECC-STTCCHHHHHHHHHHHHHHTT
T ss_pred CCCcHHHHHhcCEEEecC-CCCCCHHHHHHHHHHHHHHHc
Confidence 13599996 567788899999999998754
No 171
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.83 E-value=7.3e-19 Score=175.72 Aligned_cols=281 Identities=9% Similarity=-0.009 Sum_probs=188.5
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR 199 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~ 199 (502)
++++++++++|.+.+ ..++|+|+++++..++.+.. ++.|+++..+|.++..+++..|.
T Consensus 54 ~lr~~la~~~~~~~~-------~i~~t~g~~~al~~~~~~l~-------------gd~Vi~~~p~~~~~~~~~~~~g~-- 111 (350)
T 3fkd_A 54 TLRQMLAKRNSVDNN-------AILVTNGPTAAFYQIAQAFR-------------GSRSLIAIPSFAEYEDACRMYEH-- 111 (350)
T ss_dssp HHHHHHHHHTTCCGG-------GEEEESHHHHHHHHHHHHTT-------------TCEEEEEESCCHHHHHHHHHTTC--
T ss_pred HHHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHHC-------------CCEEEEeCCCcHHHHHHHHHcCC--
Confidence 466778888898654 58999999999977766542 35678888999999999999999
Q ss_pred CCEEEEec-CCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC-CEEEeecccccccc
Q 037144 200 KNIRAIKT-TKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG-IWVHVDAAYAGSAC 277 (502)
Q Consensus 200 ~~v~~v~~-~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g-~~lhVDaA~g~~~~ 277 (502)
+++.+|+ ++.+ .+++ ++ +.+|+++.++|++|.+-|+++|.++++.++ .++++|++|+.+..
T Consensus 112 -~~~~v~~~~~~~--~~~~--------~~------~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~ 174 (350)
T 3fkd_A 112 -EVCFYPSNEDIG--EADF--------SN------MDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTT 174 (350)
T ss_dssp -EEEEEETTSCGG--GSCC--------TT------CSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCS
T ss_pred -eEEEEecCCccc--cCcc--------CC------CCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhcc
Confidence 9999999 6422 4454 11 347788999999999999999999999876 79999999976543
Q ss_pred cCccchhhhcCCCCCCeeEEccCCcCC-CCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCC
Q 037144 278 ICPEFRHFIDGVECVDSFSFNPHKWLF-TTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCR 356 (502)
Q Consensus 278 ~~~~~~~~~~~~~~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr 356 (502)
........+. ....+.++.+++|+++ .+...|+++. ++.... .+...... +
T Consensus 175 ~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~~~~-~~~~~~-~~~~~~~~-------------------~------ 226 (350)
T 3fkd_A 175 EEVIRPADIK-GRKNLVMVYSFSHAYGIPGLRIGYIVA-NKDFMK-RVAAFSTP-------------------W------ 226 (350)
T ss_dssp SCCCCGGGGT-TCSSEEEEEESHHHHSCGGGCCEEEEC-CHHHHH-HHHTTCCT-------------------T------
T ss_pred CcchhhHHhh-cCCCEEEEecCchhccCcchheEeEEe-CHHHHH-HHHHhCCC-------------------C------
Confidence 2211111111 1234477788999997 4466788877 444332 22111000 0
Q ss_pred CCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccc
Q 037144 357 RFRSLKLWVVIRNFGV-ANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQY 435 (502)
Q Consensus 357 ~~~al~~~~~l~~~g~-~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 435 (502)
....+..+++...+.. +.+.+.+++..++++++.+.|+++|++++. ++..+++.++++...
T Consensus 227 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~----------------- 288 (350)
T 3fkd_A 227 AVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEVH-PSGTTFFLLRLKKGT----------------- 288 (350)
T ss_dssp CSCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTEEEC-CCSSSEEEEEESSSC-----------------
T ss_pred CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEC-CCCCcEEEEECCCCC-----------------
Confidence 0123344444444321 113334444558899999999999999985 556666666664311
Q ss_pred cccchhHhhHHHHHHHHHHHHh-cCcEEEEeeeEC--CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 436 RQFSEEERTNEFNRELLESINV-SGKVFMTHAIVG--GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 436 ~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
..++.+.|.+ .|..+.++..+. +..++|++++ +++++++++++|+++.++
T Consensus 289 ------------~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 289 ------------AAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ----RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp ------------HHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHHTC
T ss_pred ------------HHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHHH
Confidence 3466777777 676544433332 2579999975 566999999999988754
No 172
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.83 E-value=1.2e-19 Score=185.48 Aligned_cols=233 Identities=11% Similarity=0.111 Sum_probs=161.3
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|...++|+ .+++++|.+ ..++++||++|+..++.+... +++.|+++...|.+..
T Consensus 80 ~~p~~~~le~----~lA~l~g~~---------~~i~~ssGt~Ai~~al~~l~~-----------~Gd~Vi~~~~~y~~~~ 135 (415)
T 2fq6_A 80 GTLTHFSLQQ----AMCELEGGA---------GCVLFPCGAAAVANSILAFIE-----------QGDHVLMTNTAYEPSQ 135 (415)
T ss_dssp CCHHHHHHHH----HHHHHHTCS---------EEEEESSHHHHHHHHHHTTCC-----------TTCEEEEETTSCHHHH
T ss_pred CCchHHHHHH----HHHHHhCCC---------eEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHH
Confidence 4455555555 567777764 257778999999877765422 5678888888998876
Q ss_pred HHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH--hC
Q 037144 190 KAA----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ--FG 263 (502)
Q Consensus 190 ~aa----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~--~g 263 (502)
..+ +..|+ +++.++.+ |+++|+++|++++ .+|++..++|++|.+.|+++|+++|++ +|
T Consensus 136 ~~~~~~l~~~G~---~v~~v~~~-------d~~~le~ai~~~t------klV~~e~~~NptG~v~dl~~I~~la~~~~~g 199 (415)
T 2fq6_A 136 DFCSKILSKLGV---TTSWFDPL-------IGADIVKHLQPNT------KIVFLESPGSITMEVHDVPAIVAAVRSVVPD 199 (415)
T ss_dssp HHHHHTGGGGTC---EEEEECTT-------CGGGGGGGCCTTE------EEEEEESSCTTTCCCCCHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhhccCC------cEEEEECCCCCCCEeecHHHHHHHHHhhcCC
Confidence 554 34688 88888753 7888999886543 488889999999999999999999999 99
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144 264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK 341 (502)
Q Consensus 264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 341 (502)
+++|||++|+.+....| .. .++|.++.++||+++.+.+ .|+++.++. .+.. +.......
T Consensus 200 ~~livD~a~a~~~~~~p-~~------~g~Div~~S~sK~lg~~g~~~~G~l~~~~~-~~~~-l~~~~~~~---------- 260 (415)
T 2fq6_A 200 AIIMIDNTWAAGVLFKA-LD------FGIDVSIQAATKYLVGHSDAMIGTAVCNAR-CWEQ-LRENAYLM---------- 260 (415)
T ss_dssp CEEEEECTTTTTTSSCG-GG------GTCSEEEEETTTTTTCSSSCCCEEEEECTT-THHH-HHHHHHHT----------
T ss_pred CEEEEECCCcccccCCc-cc------cCCeEEEEeCccccCCCCCceEEEEEeCHH-HHHH-HHHHHHhc----------
Confidence 99999999986543222 11 1789999999999987754 577766543 2221 11000000
Q ss_pred ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cC----------------
Q 037144 342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA-FP---------------- 404 (502)
Q Consensus 342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~-~~---------------- 404 (502)
+........|..++. .+.+..++++..++++.+.+.|++.|.++-+ .+
T Consensus 261 -------------G~~~~~~~a~~~~~~--l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~ 325 (415)
T 2fq6_A 261 -------------GQMVDADTAYITSRG--LRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFT 325 (415)
T ss_dssp -------------TCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCS
T ss_pred -------------CCCCCHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCC
Confidence 001123445555443 4667778888899999999999988776533 22
Q ss_pred CCeeEEEEEeec
Q 037144 405 RNFSLVCFRVTP 416 (502)
Q Consensus 405 ~~~~~v~f~~~~ 416 (502)
...++++|.+..
T Consensus 326 ~~g~i~sf~l~g 337 (415)
T 2fq6_A 326 GSSGLFSFVLKK 337 (415)
T ss_dssp CCCSEEEEEESS
T ss_pred CCceEEEEEECC
Confidence 135688888754
No 173
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.82 E-value=6.2e-19 Score=179.39 Aligned_cols=298 Identities=11% Similarity=0.029 Sum_probs=184.9
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
....++.+++++++|.+ ..++|+||++|+..++.+++..... +..+ ++.+|+.+...|.+...+++..
T Consensus 82 ~~~~~l~~~la~~~g~~---------~v~~~~gg~~a~~~al~~~~~~~~~--~~~~-~~~vi~~~~~yh~~~~~~~~~~ 149 (397)
T 2ord_A 82 RPQMELAELLSKNTFGG---------KVFFANTGTEANEAAIKIARKYGKK--KSEK-KYRILSAHNSFHGRTLGSLTAT 149 (397)
T ss_dssp HHHHHHHHHHHHTTTSC---------EEEEESSHHHHHHHHHHHHHHHHHH--HCTT-CCEEEEEBTCCCCSSHHHHHHS
T ss_pred HHHHHHHHHHHHhcCCC---------eEEEeCCHHHHHHHHHHHHHHHhhc--CCCC-CceEEEEcCCcCCCchhhhhcc
Confidence 45556777888888732 5799999999999988877642111 0000 2345555555677777777777
Q ss_pred CCC---------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc----cCChhHHHHHHHHh
Q 037144 196 GID---------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA----VDPLKPLCDVAKQF 262 (502)
Q Consensus 196 Glg---------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~----idpl~eI~~i~~~~ 262 (502)
|.. ...++.+|. .|+++|+++++++ +.+|+++.++|++|. .+++++|+++|++|
T Consensus 150 g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~ 216 (397)
T 2ord_A 150 GQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSED------VCAVFLEPIQGESGIVPATKEFLEEARKLCDEY 216 (397)
T ss_dssp BCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCTT------EEEEEECSEECTTTCEECCHHHHHHHHHHHHHH
T ss_pred CChhhccccCCCCCCeeEecC-------CCHHHHHHHhhcC------eEEEEEecccCCCCcccCCHHHHHHHHHHHHHc
Confidence 761 001666664 2899999988643 458888889999999 38899999999999
Q ss_pred CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144 263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE 342 (502)
Q Consensus 263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 342 (502)
|+++++|++|+++............+. ..|.+++ +|+++.+.+.|++++++.. . .+... ...
T Consensus 217 ~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~s~--sK~~~~G~r~G~~~~~~~~-~--~l~~~----~~~-------- 278 (397)
T 2ord_A 217 DALLVFDEVQCGMGRTGKLFAYQKYGV-VPDVLTT--AKGLGGGVPIGAVIVNERA-N--VLEPG----DHG-------- 278 (397)
T ss_dssp TCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECSTT-C--CCCTT----SSC--------
T ss_pred CCEEEEEecccCCccCccchhhhhhCC-CCCeeee--ccccCCCcCeEEEEEchHh-c--ccCCC----CcC--------
Confidence 999999999975422111111001122 3687755 7999977789998886542 1 11110 000
Q ss_pred cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeEEEEEeecCc
Q 037144 343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFPRNFSLVCFRVTPSA 418 (502)
Q Consensus 343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~~~~~~v~f~~~~~~ 418 (502)
. +. .........+..+++.+.. +++.++..++++++.+.|+++ +.+... ++..++++|.+....
T Consensus 279 ~-------~~-~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 346 (397)
T 2ord_A 279 T-------TF-GGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVADV-RGMGLMIGIQFREEV 346 (397)
T ss_dssp C-------SS-TTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEECTTS
T ss_pred C-------CC-CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEEE-EEEeEEEEEEECChH
Confidence 0 00 0001112233344444332 356777888888888888764 322222 233456667664310
Q ss_pred chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
...++.+.|.++|..+.+. +..++|+++. ...+++++++++++|+++
T Consensus 347 ----------------------------~~~~l~~~l~~~gi~v~~~----~~~~iRis~~-~~~~~e~i~~~~~~l~~~ 393 (397)
T 2ord_A 347 ----------------------------SNREVATKCFENKLLVVPA----GNNTIRFLPP-LTVEYGEIDLAVETLKKV 393 (397)
T ss_dssp ----------------------------CHHHHHHHHHHTTEECEEE----TTTEEEECCC-TTCCHHHHHHHHHHHHHH
T ss_pred ----------------------------HHHHHHHHHHHCCCEEccC----CCCEEEEECC-cCCCHHHHHHHHHHHHHH
Confidence 0235667777778644332 3468999974 456788999999999988
Q ss_pred HHh
Q 037144 499 LEA 501 (502)
Q Consensus 499 ~~~ 501 (502)
.++
T Consensus 394 l~~ 396 (397)
T 2ord_A 394 LQG 396 (397)
T ss_dssp HHT
T ss_pred Hhh
Confidence 764
No 174
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.82 E-value=2.1e-19 Score=183.89 Aligned_cols=334 Identities=11% Similarity=0.051 Sum_probs=194.2
Q ss_pred HHHHHHHHhhcCCCC-----cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHH
Q 037144 91 GIVGEMLSSGFNVVG-----LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVL 165 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~-----~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~ 165 (502)
..+.+.+...+..+. ..|....+..++++.+.+|+.+.+|.+... ...++|+|+|+|+..++.+.+..
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~t~al~~~~~~l~~~-- 121 (417)
T 3g7q_A 49 DYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEP-----QNIALTNGSQSAFFYLFNLFAGR-- 121 (417)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSBC--
T ss_pred HHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCc-----ccEEEeCCcHHHHHHHHHHHcCC--
Confidence 445555555543221 246666677899999999999888864321 26899999999998887766431
Q ss_pred HHhCccCCCCeEEEeC-CCCchhHHHHHHHc----CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe
Q 037144 166 KKIGRENISKLVVYSS-DQTHCAFQKAAQIV----GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCAT 240 (502)
Q Consensus 166 ~~~~~~~~~~~~v~~s-~~~H~s~~~aa~~~----Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t 240 (502)
|.++ .+..|+++ ...|..+...+... +.+. .+..++.+. .++.+|+++|+ +.+ .+.+|+++
T Consensus 122 ---gd~~-~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~d~~~l~--~~~------~~~~v~~~ 187 (417)
T 3g7q_A 122 ---RADG-STKKVLFPLAPEYIGYADSGLEDDLFVSARP-NIELLPEGQ-FKYHVDFEHLH--IGE------ETGMICVS 187 (417)
T ss_dssp --------CCBEEEESSCCCHHHHHC-----CCEEECCC-EEEEEGGGE-EEEECCGGGCC--CCT------TEEEEEEE
T ss_pred ---CccC-CcceEEEeCCCccccchhhccchhhhccccC-cccccCCcc-cccccCHHHhc--ccc------CceEEEEC
Confidence 0000 11167776 67777766655322 2210 333444321 13578999988 332 24578888
Q ss_pred cCCccccccCC---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCc
Q 037144 241 VGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDP 317 (502)
Q Consensus 241 ~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~ 317 (502)
.++|++|.+-| +++|+++|++||+++++|++|+...-.. .+..........+.+..+++|++.....+|+++. ++
T Consensus 188 ~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~-~~ 265 (417)
T 3g7q_A 188 RPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGI-IFSEARPLWNPNIILCMSLSKLGLPGSRCGIIIA-ND 265 (417)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESGGGTCTTSCCEEEEC-CH
T ss_pred CCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccc-cccccccCCCCCEEEEEechhccCCCcceEEEEe-CH
Confidence 99999999988 8999999999999999999997532111 1111111123556778899997655566887665 33
Q ss_pred hhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cH-HHHHH-HHHHHHHHHHHHHHH
Q 037144 318 SCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GV-ANLRN-FIRSHVGMAKLFERL 392 (502)
Q Consensus 318 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~-~g~~~-~~~~~~~la~~l~~~ 392 (502)
.... .+........ .....+...++...+ .. +...+ +.+++.++++++.+.
T Consensus 266 ~~~~-~~~~~~~~~~-----------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (417)
T 3g7q_A 266 KTIT-AIANMNGIIS-----------------------LAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAI 321 (417)
T ss_dssp HHHH-HHHHHHHHHC-----------------------CCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHhhccee-----------------------eCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322 2211000000 001223333333322 11 11222 455566777777777
Q ss_pred Hhc-CC--CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeEC
Q 037144 393 VTS-DK--RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVG 469 (502)
Q Consensus 393 l~~-~~--~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~ 469 (502)
|++ ++ ++++..+....++++.+..... ...++.+.+.+.|..+.++..+.
T Consensus 322 l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~---------------------------~~~~l~~~l~~~gi~v~~g~~f~ 374 (417)
T 3g7q_A 322 IRRYLSEERCLIHKPEGAIFLWLWFKDLPI---------------------------TTELLYQRLKARGVLMVPGHYFF 374 (417)
T ss_dssp HHHHCCTTTCEEECCCBSSEEEEECTTCSS---------------------------CHHHHHHHHHHTTEECEEGGGGC
T ss_pred HHHhcccCCceeeCCCcceEEEEEcCCCCC---------------------------CHHHHHHHHHHCCEEEECchhhC
Confidence 765 45 4677644334444455532111 02356667777786554433221
Q ss_pred -C--------EEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 470 -G--------IYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 470 -g--------~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+ ..++|++++. ++++|+++++.|.++.++
T Consensus 375 ~~~~~~~~~~~~~iRis~~~---~~~~i~~~~~~l~~~l~~ 412 (417)
T 3g7q_A 375 PGLDKPWPHTHQCMRMNYVP---EPDKIEAGVKILAEEIER 412 (417)
T ss_dssp TTBSSCCGGGGGEEEEESCS---CHHHHHHHHHHHHHHHHH
T ss_pred CCCccccccCCCeEEEEecC---CHHHHHHHHHHHHHHHHH
Confidence 1 4699999863 778999999999988754
No 175
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.82 E-value=1.3e-18 Score=180.07 Aligned_cols=360 Identities=11% Similarity=0.023 Sum_probs=213.2
Q ss_pred CCHHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhc---CCCCcccccChhhHHHHHHHHHHHHHhcC
Q 037144 54 ESVETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGF---NVVGLDWISSPAAVELENIVMDWLGQMLD 130 (502)
Q Consensus 54 ~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~---n~~~~~~~~~p~~~~le~~~~~~l~~l~g 130 (502)
.+.-.+.+.+...-.+...+.....|+++...++..+. +.+.+.... +.....|...++..++.+++.+|+ +|
T Consensus 34 ~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a-v~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l---~g 109 (448)
T 3meb_A 34 DAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPA-VKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLM---FG 109 (448)
T ss_dssp CTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHH-HHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHH---HC
T ss_pred ChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHH-HHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHh---cC
Confidence 34556666666554344344444455555444344343 344433232 223345655566777887777776 36
Q ss_pred CCCccCcCCCCcEEE--cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH----HcCCCCCCEEE
Q 037144 131 LPKSFLFSGNGGGVI--QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ----IVGIDRKNIRA 204 (502)
Q Consensus 131 ~~~~~~~~~~~~g~~--t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~----~~Glg~~~v~~ 204 (502)
.+... ......++ |+|||+|+..+....... . +++.|+++..+|.++...++ ..|+ +++.
T Consensus 110 ~~~~~--~~~~~i~~~~t~ggt~al~l~~~~~~~~--~-------~gd~Vlv~~p~~~~~~~~~~~~~~~~G~---~v~~ 175 (448)
T 3meb_A 110 KDSKA--AQEGRIASCQSLSGTGSLHIGFEFLHLW--M-------PKAEFYMPSTTWPNHYGIYDKVFNKLKV---PYKE 175 (448)
T ss_dssp TTCHH--HHTTCEEEEEESHHHHHHHHHHHHHHHH--C-------TTCCEEEESSCCTHHHHHHHHHHCTTTS---CCEE
T ss_pred CCccc--cCcCcEEEEECCcHHHHHHHHHHHHHHh--C-------CCCEEEECCCCCHhHHHHHHhhHHhCCC---eEEE
Confidence 54100 00015788 999999997643322111 1 56788899999999999999 8999 9999
Q ss_pred Eec-CCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccccccCc
Q 037144 205 IKT-TKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICP 280 (502)
Q Consensus 205 v~~-~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~ 280 (502)
+|+ ++++++.+|+++|++++++.. ....+|+.+.++|+||.+-+ +++|+++|++||+++++|.+|+++.....
T Consensus 176 ~~~~~~~~~~~~d~e~l~~~l~~~~---~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~ 252 (448)
T 3meb_A 176 YTYLRKDGELEIDFSNTKKDIQSAP---EKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSF 252 (448)
T ss_dssp ECCBCTTSCSSBCHHHHHHHHHHSC---TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCH
T ss_pred EeccccccCCCcCHHHHHHHHHhCC---CCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCc
Confidence 998 542147999999999997521 12457788889999999865 55699999999999999999987654321
Q ss_pred -----cchhhhcCCCCCC-eeEEccCCcCCCC-CcceEE--Ee--------eCchh---hhhhhcCCcccccCccCCCCC
Q 037144 281 -----EFRHFIDGVECVD-SFSFNPHKWLFTT-LDCCCL--WV--------KDPSC---LLSTLSTNPQYLKNEATDQEP 340 (502)
Q Consensus 281 -----~~~~~~~~~~~aD-si~~~~hK~l~~p-~~~g~~--~~--------r~~~~---l~~~~~~~~~yl~~~~~~~~~ 340 (502)
..+.... . ..+ .++.++||.++.| ..+|++ +. .++.. +...+.. ......
T Consensus 253 ~~~~~~~~~~~~-~-~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~----- 322 (448)
T 3meb_A 253 EADAFAVRMFVD-A-GVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTL---QIRKTW----- 322 (448)
T ss_dssp HHHTHHHHHHHH-T-TCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHH---HHHTTT-----
T ss_pred ccCchhHHHHhh-c-CCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHH---HHhccc-----
Confidence 0111111 1 233 5577899999744 456776 44 33311 1111110 000000
Q ss_pred cccccCCCcccccCCCCCCchHHHHHHHHhcH--------HHHHHHHHHHHHHHHHHHHHHhcC--CC------eEEecC
Q 037144 341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV--------ANLRNFIRSHVGMAKLFERLVTSD--KR------FEVAFP 404 (502)
Q Consensus 341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~--------~g~~~~~~~~~~la~~l~~~l~~~--~~------~~l~~~ 404 (502)
+ ....+..+++...+.. +.++++.++..+++++|.+.|+++ ++ ++.. .
T Consensus 323 --------------~-~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~-~ 386 (448)
T 3meb_A 323 --------------S-MSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHI-L 386 (448)
T ss_dssp --------------S-SCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHH-H
T ss_pred --------------C-CccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCccccccee-C
Confidence 0 0122333333333321 346778888899999999999887 44 4433 2
Q ss_pred CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHH-HhcCcEEEEeeeECCEEEEEEEecCCCC
Q 037144 405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESI-NVSGKVFMTHAIVGGIYVLRFAAGNSMT 483 (502)
Q Consensus 405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lR~~~~~~~t 483 (502)
++.++++|.-.+ . ++.+.+ .+.|.. +.++. .|++++.. +
T Consensus 387 ~~~g~~~~~~~~----------------------------~----~~~~~ll~~~gV~-v~~G~------gRis~a~~-~ 426 (448)
T 3meb_A 387 TAIGMFTFTGLT----------------------------P----EHVDYLKEKWSIY-LVKAG------GRMSMCGL-T 426 (448)
T ss_dssp HCCSSEEECCCC----------------------------H----HHHHHHHHHHCEE-ECSGG------GEEEGGGC-C
T ss_pred CCceEEEecCCC----------------------------H----HHHHHHHHhCCEE-EeCCC------cEEEEecC-C
Confidence 344455542111 1 223333 234654 44422 29998632 4
Q ss_pred cHHHHHHHHHHHHHHHHh
Q 037144 484 MESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 484 ~~~di~~~~~~l~~~~~~ 501 (502)
+ ++|++++++|.++.++
T Consensus 427 ~-~~i~~~~~~l~~~l~~ 443 (448)
T 3meb_A 427 E-SNCDYVAEAIHDAVTK 443 (448)
T ss_dssp T-TTHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHh
Confidence 4 4699999999988764
No 176
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.82 E-value=6.6e-18 Score=173.36 Aligned_cols=316 Identities=10% Similarity=0.046 Sum_probs=182.7
Q ss_pred HHHHHHHHHHhc-CCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144 118 ENIVMDWLGQML-DLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 118 e~~~~~~l~~l~-g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G 196 (502)
..++.+.+++++ | +... .+++|+||++|+..++..++.. .+ ++.+|+.+...|.+...++...|
T Consensus 86 ~~~l~~~la~~~~~-~~~~------~v~~~~g~~~a~~~~~~~a~~~-~~-------~~~vi~~~p~y~~~~~~~~~~~g 150 (426)
T 1sff_A 86 YLELCEIMNQKVPG-DFAK------KTLLVTTGSEAVENAVKIARAA-TK-------RSGTIAFSGAYHGRTHYTLALTG 150 (426)
T ss_dssp HHHHHHHHHHHSSC-SSCE------EEEEESSHHHHHHHHHHHHHHH-HT-------CCEEEEETTCCCCSSHHHHHHSS
T ss_pred HHHHHHHHHHhCCc-cccc------EEEEeCchHHHHHHHHHHHHHh-hC-------CCeEEEECCCcCCCchHhhhhcC
Confidence 334556677777 4 2211 5899999999999888865432 11 44455555556666666777766
Q ss_pred CC----------CCCEEEEecCC---CCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHH
Q 037144 197 ID----------RKNIRAIKTTK---SSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVA 259 (502)
Q Consensus 197 lg----------~~~v~~v~~~~---~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~ 259 (502)
.. ...++.+|++. +.++.+|+++|++++++.. .+..+.+|+++...+++|.+.+ +++|.++|
T Consensus 151 ~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~ 229 (426)
T 1sff_A 151 KVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA-APEDIAAIVIEPVQGEGGFYASSPAFMQRLRALC 229 (426)
T ss_dssp CCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC-CGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHH
T ss_pred CccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhcc-CCCceEEEEEecccCCCCcccCCHHHHHHHHHHH
Confidence 51 01277788753 1134689999999997421 0112446666543334997777 99999999
Q ss_pred HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCC
Q 037144 260 KQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE 339 (502)
Q Consensus 260 ~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 339 (502)
++||+++++|++|+++....+.......++ .+|.+ +++|+++.+..+|++++++. .. +.+... .+..
T Consensus 230 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~di~--s~sK~~~~GlriG~~~~~~~-~~-~~l~~~-~~~~------- 296 (426)
T 1sff_A 230 DEHGIMLIADEVQSGAGRTGTLFAMEQMGV-APDLT--TFAKSIAGGFPLAGVTGRAE-VM-DAVAPG-GLGG------- 296 (426)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSGGGGTTS-CCSEE--EECGGGGTSSCCEEEEEEHH-HH-TTSCTT-SBCC-------
T ss_pred HHcCCEEEEechhhccCcccchhhhhhcCC-CCCEE--EEcccccCCCceEEEEEcHH-HH-hhhccC-CcCc-------
Confidence 999999999999986432111110001111 36766 55699986555799888643 22 222110 0000
Q ss_pred CcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeEEEEEee
Q 037144 340 PKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNFSLVCFRVT 415 (502)
Q Consensus 340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~~~v~f~~~ 415 (502)
+. .........+.++++.+..+ +..++..++++++++.|++ .+.+... ++..+++++.+.
T Consensus 297 -----------~~-~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~ 360 (426)
T 1sff_A 297 -----------TY-AGNPIACVAALEVLKVFEQE---NLLQKANDLGQKLKDGLLAIAEKHPEIGDV-RGLGAMIAIELF 360 (426)
T ss_dssp -----------SS-SSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHTCTTEEEE-EEETTEEEEEEB
T ss_pred -----------CC-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEEe
Confidence 00 00011222334444544322 3556677788888887765 4444333 233556777664
Q ss_pred cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144 416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV 495 (502)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l 495 (502)
+.... . ... .....++.++|.++|.++.++.. ...++|+++. ..+++++++++++.|
T Consensus 361 ~~~~~-----------------~-~~~--~~~~~~l~~~l~~~gi~v~~~~~--~~~~iRi~~~-~~~~~~~i~~~~~~l 417 (426)
T 1sff_A 361 EDGDH-----------------N-KPD--AKLTAEIVARARDKGLILLSCGP--YYNVLRILVP-LTIEDAQIRQGLEII 417 (426)
T ss_dssp GGGCT-----------------T-SBC--HHHHHHHHHHHHHTTEECEEEST--TSCEEEECCC-TTCCHHHHHHHHHHH
T ss_pred cCccc-----------------c-CCC--hHHHHHHHHHHHHCCcEEecCCC--CCCEEEEECC-ccCCHHHHHHHHHHH
Confidence 21000 0 000 12235677778778865443322 2468999974 456788999999999
Q ss_pred HHHHHh
Q 037144 496 QEHLEA 501 (502)
Q Consensus 496 ~~~~~~ 501 (502)
+++.++
T Consensus 418 ~~~l~~ 423 (426)
T 1sff_A 418 SQCFDE 423 (426)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987654
No 177
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.82 E-value=7e-19 Score=177.42 Aligned_cols=287 Identities=11% Similarity=0.046 Sum_probs=176.7
Q ss_pred HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCC-chhHHHHHHHcC
Q 037144 119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQT-HCAFQKAAQIVG 196 (502)
Q Consensus 119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~-H~s~~~aa~~~G 196 (502)
.++.+++++++|.+ + .+++|+||++|+..++.+++.. ..+ + .++ +.|+++..+ |.+...+....|
T Consensus 73 ~~l~~~la~~~g~~-~-------~v~~~~g~t~a~~~~~~~~~~~-~~~-~---~~g~~~vl~~~~~y~~~~~~~~~~~~ 139 (375)
T 2eh6_A 73 EELAHKLVKHFWTE-G-------KVFFANSGTESVEAAIKLARKY-WRD-K---GKNKWKFISFENSFHGRTYGSLSATG 139 (375)
T ss_dssp HHHHHHHHHTSSSC-E-------EEEEESSHHHHHHHHHHHHHHH-HHH-T---TCCCCEEEEEBTCCCCSSHHHHHHCB
T ss_pred HHHHHHHHhhcCCC-C-------eEEEeCchHHHHHHHHHHHHHH-hcc-C---CCCCCEEEEECCCcCCCchhhhhhcC
Confidence 35567788888885 3 5899999999999888765422 100 0 033 566666666 444444444333
Q ss_pred C-----CCC----CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhC
Q 037144 197 I-----DRK----NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFG 263 (502)
Q Consensus 197 l-----g~~----~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g 263 (502)
. |.. .+..+|. +|+++|+++++++ +.+|+++.+++++|.+.| +++|+++|++||
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~ 206 (375)
T 2eh6_A 140 QPKFHKGFEPLVPGFSYAKL-------NDIDSVYKLLDEE------TAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKD 206 (375)
T ss_dssp CGGGTTTTCSCCSSEEEECT-------TCHHHHHTTCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHT
T ss_pred CccccCCCCCCCCCceeCCC-------chHHHHHHHhcCC------eEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhC
Confidence 2 000 1333332 5899999888643 447888889999999977 999999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
+++++|++|+++............+. ..|+++++ |+++.+.++|++++++. . .+.+... .+..
T Consensus 207 ~~li~De~~~~~~~~~~~~~~~~~~~-~~d~~s~S--K~~~~g~~~G~~~~~~~-~-~~~~~~~-~~~~----------- 269 (375)
T 2eh6_A 207 VLLIIDEVQTGIGRTGEFYAYQHFNL-KPDVIALA--KGLGGGVPIGAILAREE-V-AQSFTPG-SHGS----------- 269 (375)
T ss_dssp CEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSCCEEEEEEHH-H-HTTCCTT-SCCC-----------
T ss_pred CEEEEeccccCCCCCCcchhhhhcCC-CCCEEEEc--ccccCCCCeEEEEEcHH-H-HhhhcCC-CCCC-----------
Confidence 99999999985322111110001111 37888766 99988888999998653 2 2222110 0000
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhh
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKL 423 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~ 423 (502)
+. ....+...++...+.. +.+..++..++++++.+.|++++...+ ++..+++++.+...
T Consensus 270 -------~~----~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~g~~~~~~~~~~------ 328 (375)
T 2eh6_A 270 -------TF----GGNPLACRAGTVVVDE--VEKLLPHVREVGNYFKEKLKELGKGKV--KGRGLMLGLELERE------ 328 (375)
T ss_dssp -------SS----TTCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTSSEE--EEETTEEEEECSSC------
T ss_pred -------CC----CCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCc--eEEEEEEEEEEcCc------
Confidence 00 0123333333332211 126778888999999999988754222 23345666655321
Q ss_pred hhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 424 RTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
..++.+.+.++|..+... +..++|++++ ..+++++++++++.|+++
T Consensus 329 ------------------------~~~~~~~l~~~gi~~~~~----~~~~iRi~~~-~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 329 ------------------------CKDYVLKALEKGLLINCT----AGKVLRFLPP-LIIQKEHIDRAISVLREI 374 (375)
T ss_dssp ------------------------CHHHHHHHHHTTEECEEE----TTTEEEECCC-TTCCHHHHHHHHHHHHHH
T ss_pred ------------------------HHHHHHHHHHCCCEEecC----CCCEEEEECC-CCCCHHHHHHHHHHHHHh
Confidence 134566666678643322 3468999975 456788999999999875
No 178
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.82 E-value=2.3e-19 Score=182.53 Aligned_cols=282 Identities=11% Similarity=0.111 Sum_probs=183.1
Q ss_pred HHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH----HHHH
Q 037144 119 NIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK----AAQI 194 (502)
Q Consensus 119 ~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~----aa~~ 194 (502)
.++.+.+++++|.+. .+++++||+|+..++. ... +++.|+++...|.+... .++.
T Consensus 58 ~~lr~~la~~~g~~~---------~i~~~sGt~a~~~al~-~~~-----------~gd~Vi~~~~~y~~~~~~~~~~~~~ 116 (393)
T 1n8p_A 58 ENLERAVAALENAQY---------GLAFSSGSATTATILQ-SLP-----------QGSHAVSIGDVYGGTHRYFTKVANA 116 (393)
T ss_dssp HHHHHHHHHHTTCSE---------EEEESCHHHHHHHHHH-TSC-----------SSCEEEEESSCCHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHhCCCc---------EEEECChHHHHHHHHH-HcC-----------CCCEEEEeCCCchHHHHHHHHHHHH
Confidence 345566788888752 4666667999987776 321 56778888888875544 3455
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh----CCEEEeec
Q 037144 195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF----GIWVHVDA 270 (502)
Q Consensus 195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~----g~~lhVDa 270 (502)
.|+ +++.+|++ | ++|+++|+++ +.+|+++.++|++|.+.|+++|+++|+++ |+++|+|+
T Consensus 117 ~G~---~v~~v~~~-------d-~~l~~~i~~~------t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~ 179 (393)
T 1n8p_A 117 HGV---ETSFTNDL-------L-NDLPQLIKEN------TKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDN 179 (393)
T ss_dssp TCS---CCEEESSH-------H-HHHHHHSCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEEC
T ss_pred cCc---EEEEeCCC-------h-HHHHHhcccC------ceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeC
Confidence 677 89998863 6 8888887543 34888899999999999999999999999 99999999
Q ss_pred ccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cc-eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCC
Q 037144 271 AYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DC-CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYK 348 (502)
Q Consensus 271 A~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~-g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 348 (502)
+|+.+... ..... ++|.++.++||+++.+. .. |+++.+++.......... ...
T Consensus 180 a~~~~~~~--~~~~~-----~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~-~~~----------------- 234 (393)
T 1n8p_A 180 TFLSPYIS--NPLNF-----GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQ-NAI----------------- 234 (393)
T ss_dssp TTTHHHHC--CGGGG-----TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHH-HHH-----------------
T ss_pred CccccccC--CHHHc-----CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHH-Hhc-----------------
Confidence 99877653 11111 68999999999987553 14 777665554332211000 000
Q ss_pred cccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEe-cC-----C------------C-ee
Q 037144 349 DWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR-FEVA-FP-----R------------N-FS 408 (502)
Q Consensus 349 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~-~~l~-~~-----~------------~-~~ 408 (502)
+.....+..|.+++.+ +.+..++++..++++.+.+.|++.+. +.-+ .+ + . .+
T Consensus 235 ------g~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~ 306 (393)
T 1n8p_A 235 ------GAIPSPFDAWLTHRGL--KTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGG 306 (393)
T ss_dssp ------CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCS
T ss_pred ------CCCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCcc
Confidence 0011334455544433 44566777788888999999988766 5432 12 1 2 56
Q ss_pred EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE---------EEEee--eE---------
Q 037144 409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV---------FMTHA--IV--------- 468 (502)
Q Consensus 409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---------~~~~~--~~--------- 468 (502)
+++|.+.+. ......+.+.+...+.. ...+. ..
T Consensus 307 i~~~~l~~~---------------------------~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~ 359 (393)
T 1n8p_A 307 MISFRIKGG---------------------------AEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEARE 359 (393)
T ss_dssp EEEEEESSC---------------------------HHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTT
T ss_pred EEEEEeCCc---------------------------HHHHHHHHhhCCcceECCCCCCCcceeeccccccccccCHHHHH
Confidence 788877532 11234555555322211 01110 00
Q ss_pred -CC--EEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 469 -GG--IYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 469 -~g--~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
.| ...+|+|++ ..+++++|+.+.++|+++.
T Consensus 360 ~~g~~~~~iRlS~g-~~~~~~~i~~l~~al~~~~ 392 (393)
T 1n8p_A 360 ASGVFDDLVRISVG-IEDTDDLLEDIKQALKQAT 392 (393)
T ss_dssp TTSCCTTEEEEECC-SSCHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCeEEEEEc-cCCHHHHHHHHHHHHHHhh
Confidence 12 368999986 5577889999999998764
No 179
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.82 E-value=7.8e-19 Score=180.23 Aligned_cols=310 Identities=10% Similarity=0.013 Sum_probs=188.6
Q ss_pred cc-ccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHH--HHHHHHHHHHHHHhCccCCC--------C
Q 037144 107 DW-ISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALL--CTLTAARDRVLKKIGRENIS--------K 175 (502)
Q Consensus 107 ~~-~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~--~al~~a~~~~~~~~~~~~~~--------~ 175 (502)
.| ...++..++++. ++++++++.+ ..++|+|+++++. .++.+.... .. + +
T Consensus 64 ~Yp~~~~g~~~lr~~----ia~~~~~~~~-------~i~~t~G~~~al~~~~~~~~l~~~------~~--g~~~~~~~~g 124 (423)
T 3ez1_A 64 NYPGGVAGLPSARAL----FAGYLDVKAE-------NVLVWNNSSLELQGLVLTFALLHG------VR--GSTGPWLSQT 124 (423)
T ss_dssp SSCSCTTCCHHHHHH----HHHHTTSCGG-------GEEECSSCHHHHHHHHHHHHHHTC------CT--TCSSCGGGGC
T ss_pred CCCCCCCChHHHHHH----HHHHhCCChh-------hEEEeCCcHHHHHHHHHHHHHhcc------CC--CccccccCCC
Confidence 34 444445555555 5556677654 6899999999986 555544320 00 1 4
Q ss_pred eEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEE-ecCCccccccCChh-
Q 037144 176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCA-TVGTTAITAVDPLK- 253 (502)
Q Consensus 176 ~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~-t~gtt~~G~idpl~- 253 (502)
+.|++...+|..+...++..|. +++.+|++.+ .+|+++|++++++. ..+.+|++ ..++|+||.+-|.+
T Consensus 125 d~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~---g~d~~~l~~~l~~~----~~~~~v~~~~~~~NPtG~~~~~~~ 194 (423)
T 3ez1_A 125 PKMIVTVPGYDRHFLLLQTLGF---ELLTVDMQSD---GPDVDAVERLAGTD----PSVKGILFVPTYSNPGGETISLEK 194 (423)
T ss_dssp CEEEEEESCCHHHHHHHHHHTC---EEEEEEEETT---EECHHHHHHHHHSC----TTEEEEEECSSSCTTTCCCCCHHH
T ss_pred CEEEEcCCCcHHHHHHHHHcCC---EEEeccCCCC---CCCHHHHHHHHhhC----CCceEEEECCCCCCCCCcCCCHHH
Confidence 7888999999999999999999 9999999752 49999999999521 12345654 47899999998877
Q ss_pred --HHHHHH-HHhCCEEEeecccccccccC-c-----cchhhh--cCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhh
Q 037144 254 --PLCDVA-KQFGIWVHVDAAYAGSACIC-P-----EFRHFI--DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLS 322 (502)
Q Consensus 254 --eI~~i~-~~~g~~lhVDaA~g~~~~~~-~-----~~~~~~--~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~ 322 (502)
+|+++| ++||+++++|++|+...+.. . ...... .+....+.+..+++|+++.+.+.|+++.++ ....
T Consensus 195 l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~-~~~~- 272 (423)
T 3ez1_A 195 ARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSE-DNIR- 272 (423)
T ss_dssp HHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECH-HHHH-
T ss_pred HHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCH-HHHH-
Confidence 888888 89999999999997533222 1 111110 012245577889999877777888877653 3222
Q ss_pred hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH------HHHHHHHHHHHHHHHHH----HHH
Q 037144 323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV------ANLRNFIRSHVGMAKLF----ERL 392 (502)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~------~g~~~~~~~~~~la~~l----~~~ 392 (502)
.+.....+.. .....+..+++...+.. +.+.+..+.+.+..+.+ .+.
T Consensus 273 ~~~~~~~~~~-----------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 329 (423)
T 3ez1_A 273 WLSKYLGAQS-----------------------IGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAE 329 (423)
T ss_dssp HHHHHHHHSC-----------------------SCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhc-----------------------cCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2211000000 00122333333333222 23334444444444444 444
Q ss_pred HhcCC-CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee-E--
Q 037144 393 VTSDK-RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI-V-- 468 (502)
Q Consensus 393 l~~~~-~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~-- 468 (502)
+.+++ ++++..+....++.+.+.... ...+.+.+.+.|..+.+.+. +
T Consensus 330 l~~~~~~~~~~~p~~g~~~~~~~~~~~-----------------------------~~~~~~~l~~~gv~v~~~g~~~~~ 380 (423)
T 3ez1_A 330 LGEGGEYATWTLPKGGYFISLDTAEPV-----------------------------ADRVVKLAEAAGVSLTPAGATYPA 380 (423)
T ss_dssp HTTTTSSEEECCCSBSSCEEEEESSSC-----------------------------HHHHHHHHHHTTEECCCTTTTSST
T ss_pred cCcCCCceEEeCCCccEEEEEECCCCc-----------------------------HHHHHHHHHHCCcEEecCcccccC
Confidence 44454 477664444445556554311 23556667777865444121 1
Q ss_pred ---CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 469 ---GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 469 ---~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.+..++|++++.. ++++|+++++.|.++.++
T Consensus 381 ~~~~~~~~iRis~~~~--~~~~i~~~~~~l~~~l~~ 414 (423)
T 3ez1_A 381 GQDPHNRNLRLAPTRP--PVEEVRTAMQVVAACIRL 414 (423)
T ss_dssp TCCSSSCEEEECCSSS--CHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCeEEEEcCCC--CHHHHHHHHHHHHHHHHH
Confidence 2357999998533 677999999999887653
No 180
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.82 E-value=2.4e-19 Score=182.76 Aligned_cols=304 Identities=13% Similarity=0.032 Sum_probs=184.2
Q ss_pred ccccChhhHHHHHHHHHHHHHhcC-CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCc
Q 037144 107 DWISSPAAVELENIVMDWLGQMLD-LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTH 185 (502)
Q Consensus 107 ~~~~~p~~~~le~~~~~~l~~l~g-~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (502)
.|...++..++++.+.+++. +| .+.+ ..++|+|+++++..++ .... +++.|++...+|
T Consensus 70 ~y~~~~g~~~lr~~la~~l~--~g~~~~~-------~v~~~~G~~~al~~~~-~~~~-----------~gd~Vl~~~p~y 128 (400)
T 3asa_A 70 GYGPDFGLPALRQKLSEDFY--RGFVDAK-------EIFISDGAKVDLFRLL-SFFG-----------PNQTVAIQDPSY 128 (400)
T ss_dssp CCCCTTCCHHHHHHHHHTTS--TTSSCGG-------GEEEESCHHHHHHHHH-HHHC-----------SSCEEEEEESCC
T ss_pred CCCCCCCCHHHHHHHHHHHH--cCCCCHH-------HEEEccChHHHHHHHH-HHcC-----------CCCEEEECCCCc
Confidence 45444556777776665543 56 4433 6899999998886533 2211 567788888899
Q ss_pred hhHHHHHHHcCCCCCC-EEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHH
Q 037144 186 CAFQKAAQIVGIDRKN-IRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQ 261 (502)
Q Consensus 186 ~s~~~aa~~~Glg~~~-v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~ 261 (502)
.++..+++..|. + ++.+|+++++.+..|++ +. ..+.+|+++.++|++|.+-| +++|+++|++
T Consensus 129 ~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~l~---~~--------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~ 194 (400)
T 3asa_A 129 PAYLDIARLTGA---KEIIALPCLQENAFFPEFP---ED--------THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIE 194 (400)
T ss_dssp HHHHHHHHHTTC---SEEEEEECCGGGTTCCCCC---TT--------CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCC---cceEecccchhcCcccChh---hc--------cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 999999999998 8 99999875333344432 11 12346777789999999976 6678899999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCC---CCCeeEEccCCcCC-CCCcceEEEeeCchh------hhhhhcCCcccc
Q 037144 262 FGIWVHVDAAYAGSACICPEFRHFIDGVE---CVDSFSFNPHKWLF-TTLDCCCLWVKDPSC------LLSTLSTNPQYL 331 (502)
Q Consensus 262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~---~aDsi~~~~hK~l~-~p~~~g~~~~r~~~~------l~~~~~~~~~yl 331 (502)
+|+++++|++|+.+.... .....+..+. ..+.+..+++|+++ ....+|++++++... +..........
T Consensus 195 ~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~- 272 (400)
T 3asa_A 195 HEILILFDAAYSTFISDP-SLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLST- 272 (400)
T ss_dssp TTCEEEEECTTGGGCCCT-TSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHH-
T ss_pred cCCEEEEEchhhhhhcCC-CCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHHHHHHHhcc-
Confidence 999999999998654321 1001111121 23467889999997 444578888755431 11111000000
Q ss_pred cCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEE
Q 037144 332 KNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVC 411 (502)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~ 411 (502)
+. . ....+...++...+....++++.++..++++++.+.|++. ++++..+...++++
T Consensus 273 -------------------~~-~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~ 329 (400)
T 3asa_A 273 -------------------TF-N--GASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLAT-GFEVFGGEHAPYLW 329 (400)
T ss_dssp -------------------HC-C--CCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT-TCEEEECSSSSEEE
T ss_pred -------------------Cc-c--CCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCceEEE
Confidence 00 0 0022333333333321146677888889999999999987 78887544455666
Q ss_pred EE-eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhc-CcEEEEeeeEC--CEEEEEEEecCCCCcHHH
Q 037144 412 FR-VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVS-GKVFMTHAIVG--GIYVLRFAAGNSMTMESH 487 (502)
Q Consensus 412 f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lR~~~~~~~t~~~d 487 (502)
+. .+ ... + ..++.+++.++ |..+.++..+. +..++|+++. +++++
T Consensus 330 ~~~~~-~~~--------------------~-------~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~---~~~e~ 378 (400)
T 3asa_A 330 VKPTQ-ANI--------------------S-------DRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSL---GKRED 378 (400)
T ss_dssp EECCC-TTC--------------------C-------TTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECC---SCHHH
T ss_pred EeccC-CCC--------------------C-------HHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEee---CCHHH
Confidence 66 43 211 0 11345555543 76544332222 3468999942 56789
Q ss_pred HHHHHHHHHHHHHh
Q 037144 488 VRAAWTVVQEHLEA 501 (502)
Q Consensus 488 i~~~~~~l~~~~~~ 501 (502)
++++++.|+++.++
T Consensus 379 i~~~l~~l~~~~~~ 392 (400)
T 3asa_A 379 ILAACERLQMAPAL 392 (400)
T ss_dssp HHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999887654
No 181
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.82 E-value=9.4e-19 Score=179.93 Aligned_cols=315 Identities=10% Similarity=-0.018 Sum_probs=192.0
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHH--HHHHHHHHHHHHHh---CccCCCCeEEEeC
Q 037144 107 DWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALL--CTLTAARDRVLKKI---GRENISKLVVYSS 181 (502)
Q Consensus 107 ~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~--~al~~a~~~~~~~~---~~~~~~~~~v~~s 181 (502)
.|....+..++++.+.++ ++++.+ ..++|+|+++++. .++.+..+.. .. .+...+++.|++.
T Consensus 73 ~Y~~~~g~~~lr~~ia~~----~~~~~~-------~i~~t~G~~~al~~~~~~~~l~~~~--~g~~~~~~~~~gd~V~v~ 139 (427)
T 3ppl_A 73 NYGGLDGIVDIRQIWADL----LGVPVE-------QVLAGDASSLNIMFDVISWSYIFGN--NDSVQPWSKEETVKWICP 139 (427)
T ss_dssp SSCCSSCCHHHHHHHHHH----HTSCGG-------GEEECSSCHHHHHHHHHHHHHHHCC--TTCSSCGGGSSCCEEEEE
T ss_pred CCCCCCCcHHHHHHHHHH----hCCCcc-------eEEEeCCcHHHHHHHHHHHHHhccC--CcccccccCCCCCEEEEc
Confidence 454444556666665544 477654 6899999999984 4444433200 00 0000016788899
Q ss_pred CCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe-cCCccccccCChh---HHHH
Q 037144 182 DQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCAT-VGTTAITAVDPLK---PLCD 257 (502)
Q Consensus 182 ~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t-~gtt~~G~idpl~---eI~~ 257 (502)
..+|.++...++..|. +++.+|++. + .+|+++|+++++.. .+.+|+++ .++|+||.+-|.+ +|++
T Consensus 140 ~p~y~~~~~~~~~~g~---~~~~v~~~~--~-g~d~~~l~~~l~~~-----~~~~v~~~p~~~NPtG~~~~~~~~~~l~~ 208 (427)
T 3ppl_A 140 VPGYDRHFSITERFGF---EMISVPMNE--D-GPDMDAVEELVKNP-----QVKGMWVVPVFSNPTGFTVTEDVAKRLSA 208 (427)
T ss_dssp ESCCHHHHHHHHHTTC---EEEEEEEET--T-EECHHHHHHHTTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHH
T ss_pred CCCcHHHHHHHHHcCC---EEEEeCCCC--C-CCCHHHHHHHHhcC-----CCeEEEECCCCCCCCCccCCHHHHHHHHH
Confidence 9999999999999999 999999985 2 39999999998421 13356555 7899999998877 8888
Q ss_pred HH-HHhCCEEEeecccccccccCcc-----chhhh--cCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcc
Q 037144 258 VA-KQFGIWVHVDAAYAGSACICPE-----FRHFI--DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQ 329 (502)
Q Consensus 258 i~-~~~g~~lhVDaA~g~~~~~~~~-----~~~~~--~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~ 329 (502)
+| ++||+++|+|.+|+...+.... ..... .+..+.+.+..+++|+++.+.++|+++.. +.... .+.....
T Consensus 209 ~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~-~~l~~-~~~~~~~ 286 (427)
T 3ppl_A 209 METAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTS-AENRK-WYTGHAG 286 (427)
T ss_dssp CCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECC-HHHHH-HHHHHHH
T ss_pred HHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcC-HHHHH-HHHHHhh
Confidence 88 9999999999999875432211 11110 11234567788999997666778877664 33222 2211100
Q ss_pred cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHh----cCCCeE
Q 037144 330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV-----ANLRNFIRSHVGMAKLFERLVT----SDKRFE 400 (502)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~la~~l~~~l~----~~~~~~ 400 (502)
+.. .....+..+++...+.. +.+.+..+.+.++.+++.+.|. .+++++
T Consensus 287 ~~~-----------------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~ 343 (427)
T 3ppl_A 287 IRG-----------------------IGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQ 343 (427)
T ss_dssp HHC-----------------------SCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCE
T ss_pred ccc-----------------------CCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceE
Confidence 000 01123333444444322 2344455555555555655553 344577
Q ss_pred EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee-E-----CCEEEE
Q 037144 401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI-V-----GGIYVL 474 (502)
Q Consensus 401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~-----~g~~~l 474 (502)
+..+....++++.+.... ..++.+.+.+.|..+.++.. + .+..++
T Consensus 344 ~~~p~~g~~~~~~~~~~~-----------------------------~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~ 394 (427)
T 3ppl_A 344 WTVPAGGYFISLDVVPGT-----------------------------ASRVAELAKEAGIALTGAGSSYPLRQDPENKNL 394 (427)
T ss_dssp ECCCSBSSCEEEECSTTC-----------------------------HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEE
T ss_pred EeCCCccEEEEEECCcch-----------------------------HHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeE
Confidence 654444445555553210 23556667777865444121 1 246799
Q ss_pred EEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 475 RFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 475 R~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
|++++.. ++++|+++++.|.++.++
T Consensus 395 Ris~~~~--~~~~i~~~~~~l~~~l~~ 419 (427)
T 3ppl_A 395 RLAPSLP--PVEELEVAMDGVATCVLL 419 (427)
T ss_dssp EECCSSS--CHHHHHHHHHHHHHHHHH
T ss_pred EEECCCC--CHHHHHHHHHHHHHHHHH
Confidence 9998533 677999999999887653
No 182
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.81 E-value=5.8e-19 Score=179.30 Aligned_cols=322 Identities=12% Similarity=0.035 Sum_probs=198.4
Q ss_pred HHHHHHHHhhcCC-CCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE--cCCchHHHHHHHHHHHHHHHHH
Q 037144 91 GIVGEMLSSGFNV-VGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI--QGTTCEALLCTLTAARDRVLKK 167 (502)
Q Consensus 91 ~~~~~~l~~~~n~-~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~--t~ggt~a~~~al~~a~~~~~~~ 167 (502)
..+.+.+...+.. ....|....+..++++.+.+++... +.+.+ ..++ |+||++|+..++.+.+...
T Consensus 47 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~-------~v~~~~~~g~~~a~~~~~~~~~~~~--- 115 (394)
T 2ay1_A 47 RAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGD-GLKSE-------TTATLATVGGTGALRQALELARMAN--- 115 (394)
T ss_dssp HHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGG-GCCGG-------GEEEEEEEHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCC-CCCcc-------cEEEEecCCchhHHHHHHHHHHhcC---
Confidence 4455555544322 2334555556678888888877432 22332 5777 9999999988877665420
Q ss_pred hCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 168 IGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
+++.|+++..+|.++...++..|. +++.+|.+..+++.+|+++|++++++.. ....+++.+.++|+||
T Consensus 116 ------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~~~~~~nptG 183 (394)
T 2ay1_A 116 ------PDLRVFVSDPTWPNHVSIMNFMGL---PVQTYRYFDAETRGVDFEGMKADLAAAK---KGDMVLLHGCCHNPTG 183 (394)
T ss_dssp ------TTCCEEEEESCCHHHHHHHHHHTC---CEEEEECEETTTTEECHHHHHHHHHTCC---TTCEEEEESSSCTTTC
T ss_pred ------CCCEEEEcCCCChhHHHHHHHcCC---ceEEEecccccCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCC
Confidence 455677888899999999999999 9999998532357899999999997531 1235677789999999
Q ss_pred ccCC---hhHHHHHHHHhCCEEEeecccccccccC--c--cchhhhcCCCCCC-eeEEccCCcCCC-CCcceEEEe--eC
Q 037144 248 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIC--P--EFRHFIDGVECVD-SFSFNPHKWLFT-TLDCCCLWV--KD 316 (502)
Q Consensus 248 ~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~--~--~~~~~~~~~~~aD-si~~~~hK~l~~-p~~~g~~~~--r~ 316 (502)
.+-| +++|+++|++||+++++|++|+++.... + .... +... ..+ .+..++||+++. ...+|++++ ++
T Consensus 184 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~-~~~~i~~~s~sK~~~~~G~riG~~~~~~~~ 261 (394)
T 2ay1_A 184 ANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRL-IASR-IPEVLIAASCSKNFGIYRERTGCLLALCAD 261 (394)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHH-HHHH-CSSEEEEEECTTTTTCGGGCEEEEEEECSS
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHH-Hhhc-CCCEEEEEeccCCCcCcCCccceEEEEeCC
Confidence 9865 6688999999999999999998754321 0 0111 1111 223 456689999974 345688887 34
Q ss_pred chhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--c------HHHHHHHHHHHHHHHHH
Q 037144 317 PSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--G------VANLRNFIRSHVGMAKL 388 (502)
Q Consensus 317 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g------~~g~~~~~~~~~~la~~ 388 (502)
+..+............. +..+ ...+..+++.+.+ + .+.++++.++..+++++
T Consensus 262 ~~~~~~l~~~~~~~~~~-----------------~~~~---~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 321 (394)
T 2ay1_A 262 AATRELAQGAMAFLNRQ-----------------TYSF---PPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQ 321 (394)
T ss_dssp HHHHHHHHHHHHHHHHT-----------------TTSS---CCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh-----------------hcCC---CChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43221111000000000 0000 0223333333333 1 24677888888999999
Q ss_pred HHHHHhcCC---CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEe
Q 037144 389 FERLVTSDK---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTH 465 (502)
Q Consensus 389 l~~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 465 (502)
+.+.|++++ ++++.. +..+++.|...+ . ..+.+.+.+.|.. +.+
T Consensus 322 l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~----------------------------~---~~~~~~l~~~gi~-v~~ 368 (394)
T 2ay1_A 322 LAGELRDLSGSDRFGFVA-EHRGMFSRLGAT----------------------------P---EQVKRIKEEFGIY-MVG 368 (394)
T ss_dssp HHHHHHHHHTSSTTTHHH-HCCSSEEECCCC----------------------------H---HHHHHHHHHHCEE-CCT
T ss_pred HHHHHHhcCCCCCeeEEc-CCceEEEeeCCC----------------------------H---HHHHHHHHhCCEE-ecC
Confidence 999998763 355542 333344332111 1 1344444456754 332
Q ss_pred eeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 466 AIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 466 ~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
.+|+++. . ++++++++++++|+++.
T Consensus 369 -------~~Ris~~-~-~~~~~i~~~~~~l~~~~ 393 (394)
T 2ay1_A 369 -------DSRINIA-G-LNDNTIPILARAIIEVG 393 (394)
T ss_dssp -------TCEEEGG-G-CCTTTHHHHHHHHHHHT
T ss_pred -------CCeEEee-c-CCHhhHHHHHHHHHHcc
Confidence 2699986 3 46679999999998763
No 183
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.81 E-value=9e-20 Score=189.09 Aligned_cols=159 Identities=14% Similarity=0.130 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHH----H
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKA----A 192 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a----a 192 (502)
...++.+++++++|.+ ..+++++|++|+..++. ... +++.|+++...|.++... +
T Consensus 134 ~~~~l~~~la~~~g~~---------~~i~~~sGt~al~~~l~-~~~-----------~Gd~Vi~~~~~y~~~~~~~~~~~ 192 (464)
T 1ibj_A 134 TRDALESLLAKLDKAD---------RAFCFTSGMAALSAVTH-LIK-----------NGEEIVAGDDVYGGSDRLLSQVV 192 (464)
T ss_dssp HHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHT-TSC-----------TTCEEEEESSCCHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhCCC---------eEEEECCHHHHHHHHHH-HhC-----------CCCEEEEECCCchhHHHHHHHHH
Confidence 5677889999999875 35788888888755442 111 567888888899887654 4
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
+..|+ +++.+|.+ |+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|++||+++++|++|
T Consensus 193 ~~~G~---~v~~v~~~-------d~~~l~~~i~~~------tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~ 256 (464)
T 1ibj_A 193 PRSGV---VVKRVNTT-------KLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSI 256 (464)
T ss_dssp GGGTC---EEEEECTT-------SHHHHHHHCCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTT
T ss_pred HHcCC---EEEEeCCC-------CHHHHHHHhccC------ceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCC
Confidence 56788 88888863 889999988643 348889999999999999999999999999999999999
Q ss_pred ccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcc--eEEEeeCchh
Q 037144 273 AGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDC--CCLWVKDPSC 319 (502)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~--g~~~~r~~~~ 319 (502)
+.+....+. . .++|+++.++||++++|.|+ |+++++++..
T Consensus 257 ~~g~~~~~~-~------~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l 298 (464)
T 1ibj_A 257 MSPVLSRPL-E------LGADIVMHSATKFIAGHSDVMAGVLAVKGEKL 298 (464)
T ss_dssp TCTTTCCGG-G------TTCSEEEEETTTTTTCSSCCCCEEEEECSHHH
T ss_pred cccccCChh-h------cCCEEEEECCcccccCCCCCcEEEEEEChHHH
Confidence 765432221 1 16899999999999988765 8888876443
No 184
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.81 E-value=2.6e-19 Score=182.69 Aligned_cols=215 Identities=12% Similarity=0.094 Sum_probs=145.7
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH
Q 037144 111 SPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK 190 (502)
Q Consensus 111 ~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 190 (502)
.|...++|+. +++++|.+. .+++++|++|+..++. ... +++.|+++...|.+...
T Consensus 66 ~p~~~~l~~~----la~~~g~~~---------~i~~~sG~~ai~~~~~-l~~-----------~gd~Vl~~~~~y~~~~~ 120 (403)
T 3cog_A 66 NPTRNCLEKA----VAALDGAKY---------CLAFASGLAATVTITH-LLK-----------AGDQIICMDDVYGGTNR 120 (403)
T ss_dssp CHHHHHHHHH----HHHHHTCSE---------EEEESCHHHHHHHHHT-TSC-----------TTCEEEEESSCCHHHHH
T ss_pred CchHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHH-HhC-----------CCCEEEEeCCCcchHHH
Confidence 4555556555 566667652 4556667788876655 321 56788888889987544
Q ss_pred H----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC-CE
Q 037144 191 A----AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG-IW 265 (502)
Q Consensus 191 a----a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g-~~ 265 (502)
. ++..|+ +++.+|.+ |+++|+++|+++ +.+|+++.++|++|.+.|+++|+++|+++| ++
T Consensus 121 ~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~i~~~------t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~ 184 (403)
T 3cog_A 121 YFRQVASEFGL---KISFVDCS-------KIKLLEAAITPE------TKLVWIETPTNPTQKVIDIEGCAHIVHKHGDII 184 (403)
T ss_dssp HHHHTGGGGTC---EEEEECTT-------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCE
T ss_pred HHHHHHHHcCC---EEEEECCC-------CHHHHHHhcCcC------CeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCE
Confidence 3 456788 88888864 789999988653 347888999999999999999999999999 99
Q ss_pred EEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCc--ceEEEeeCchhhhhhhcCCcccccCccCCCCCccc
Q 037144 266 VHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLD--CCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 266 lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~--~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 343 (502)
+++|++|+.+....+ .. .++|.++.++||++++|.+ +|+++.+++..... +.. +....
T Consensus 185 livD~~~~~~~~~~~-~~------~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~-l~~---~~~~~--------- 244 (403)
T 3cog_A 185 LVVDNTFMSPYFQRP-LA------LGADISMYSATKYMNGHSDVVMGLVSVNCESLHNR-LRF---LQNSL--------- 244 (403)
T ss_dssp EEEECTTTCTTTCCT-TT------TTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHH-HHH---HHHHH---------
T ss_pred EEEECCCcccccCCc-cc------cCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHH-HHH---HHHhc---------
Confidence 999999987654222 11 1689999999999998876 48887766543321 110 10000
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRF 399 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~ 399 (502)
+-....+..|++++.+ +.+..++++..+++..+.+.+++.+.+
T Consensus 245 -----------g~~~~~~~~~~~~~~l--~~l~~r~~~~~~n~~~l~~~l~~~~~v 287 (403)
T 3cog_A 245 -----------GAVPSPIDCYLCNRGL--KTLHVRMEKHFKNGMAVAQFLESNPWV 287 (403)
T ss_dssp -----------CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred -----------CCCCCHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 0001345566666544 344556666777777777777665433
No 185
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.81 E-value=3.3e-19 Score=181.20 Aligned_cols=320 Identities=11% Similarity=0.030 Sum_probs=199.8
Q ss_pred HHHHHHHHhhcCC-CCcccccChhhHHHHHHHHHHHHHhcCC--CCccCcCCCCcEEE--cCCchHHHHHHHHHHHHHHH
Q 037144 91 GIVGEMLSSGFNV-VGLDWISSPAAVELENIVMDWLGQMLDL--PKSFLFSGNGGGVI--QGTTCEALLCTLTAARDRVL 165 (502)
Q Consensus 91 ~~~~~~l~~~~n~-~~~~~~~~p~~~~le~~~~~~l~~l~g~--~~~~~~~~~~~g~~--t~ggt~a~~~al~~a~~~~~ 165 (502)
..+.+.+...+.. ....|...++..++++.+.+|+....+. +.+ ..++ |+||++|+..++.+++..
T Consensus 47 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~-------~v~~~~~~g~~~a~~~~~~~~~~~-- 117 (396)
T 2q7w_A 47 TSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDK-------RARTAQTPGGTGALRVAADFLAKN-- 117 (396)
T ss_dssp HHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT-------CEEEEEESHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccc-------cEEEEecccchhhHHHHHHHHHHh--
Confidence 3344555544322 2334655566788888888887654332 122 4676 999999998887665431
Q ss_pred HHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144 166 KKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245 (502)
Q Consensus 166 ~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~ 245 (502)
. +++.|++...+|.++...++..|. +++.+|.++.+++.+|+++|++++++.. ....+++.+.++|+
T Consensus 118 ~-------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~~~~p~np 184 (396)
T 2q7w_A 118 T-------SVKRVWVSNPSWPNHKSVFNSAGL---EVREYAYYDAENHTLDFDALINSLNEAQ---AGDVVLFHGCCHNP 184 (396)
T ss_dssp S-------CCCEEEEEESCCTHHHHHHHHTTC---EEEEEECEETTTTEECHHHHHHHHTTCC---TTCEEEEECSSCTT
T ss_pred C-------CCCEEEEcCCCchhHHHHHHHcCC---ceEEEecccCCCCCcCHHHHHHHHHhCC---CCCEEEEeCCCCCC
Confidence 0 567788888999999999999999 9999998532257899999999986421 12356778899999
Q ss_pred ccccCC---hhHHHHHHHHhCCEEEeecccccccccC--c--cchhhhcCCCCCCeeEEccCCcCCC-CCcceEEEe--e
Q 037144 246 ITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACIC--P--EFRHFIDGVECVDSFSFNPHKWLFT-TLDCCCLWV--K 315 (502)
Q Consensus 246 ~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~--~--~~~~~~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~--r 315 (502)
||.+-| +++|+++|++||+++++|++|+++.... + .... +.....-+.++.++||+++. ...+|++++ +
T Consensus 185 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~ 263 (396)
T 2q7w_A 185 TGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRA-FAAMHKELIVASSYSXNFGLYNERVGACTLVAA 263 (396)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHH-HHHHCSCEEEEEECTTTTTCGGGCCEEEEEECS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHH-HHhcCCcEEEEEeccccccccccccceEEEEcC
Confidence 999854 6689999999999999999997754321 0 1111 11111234667889999974 344788876 3
Q ss_pred Cchh---hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc--------HHHHHHHHHHHHH
Q 037144 316 DPSC---LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG--------VANLRNFIRSHVG 384 (502)
Q Consensus 316 ~~~~---l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~ 384 (502)
++.. +...+.. ..... ..+ ...+..+++...+. .+.+++..+++.+
T Consensus 264 ~~~~~~~~~~~~~~---~~~~~-----------------~~~---~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~ 320 (396)
T 2q7w_A 264 DSETVDRAFSQMKA---AIRAN-----------------YSN---PPAHGASVVATILSNDALRAIWEQELTDMRQRIQR 320 (396)
T ss_dssp SHHHHHHHHHHHHH---HHHTT-----------------TSS---CCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHH
T ss_pred CHHHHHHHHHHHHH---HHhhc-----------------cCC---CCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHH
Confidence 4421 1111110 00000 000 02233334444332 2466777888899
Q ss_pred HHHHHHHHHhcCC---CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcE
Q 037144 385 MAKLFERLVTSDK---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKV 461 (502)
Q Consensus 385 la~~l~~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 461 (502)
+++++.+.|++.+ ++++. ++..+++.|.-.+ . ..+.+.+.+.|..
T Consensus 321 ~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~----------------------------~---~~~~~~l~~~gv~ 368 (396)
T 2q7w_A 321 MRQLFVNTLQEKGANRDFSFI-IKQNGMFSFSGLT----------------------------K---EQVLRLREEFGVY 368 (396)
T ss_dssp HHHHHHHHHHHTTCCSCCTHH-HHCCSSEEECCCC----------------------------H---HHHHHHHHHHCEE
T ss_pred HHHHHHHHHHhcCCCCCccee-cCCCceEEEecCC----------------------------H---HHHHHHHHhcCee
Confidence 9999999998874 36554 3444555442111 1 1334444455754
Q ss_pred EEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHH
Q 037144 462 FMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEH 498 (502)
Q Consensus 462 ~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~ 498 (502)
+.+ .+|++++.. +++++++++++|+++
T Consensus 369 -v~~-------~~Ris~~~~--~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 369 -AVA-------SGRVNVAGM--TPDNMAPLCEAIVAV 395 (396)
T ss_dssp -CCT-------TCEEEGGGC--CTTTHHHHHHHHHHH
T ss_pred -ecC-------CceEEEeec--CHHHHHHHHHHHHhc
Confidence 333 269998732 566999999999875
No 186
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.81 E-value=9.8e-18 Score=170.40 Aligned_cols=301 Identities=12% Similarity=0.046 Sum_probs=178.1
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC-chhHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT-HCAFQKAAQ 193 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~-H~s~~~aa~ 193 (502)
.....++.+++++++|. + ..++++||++|+..++.+++...... + .++..|++.+.. |.+...+..
T Consensus 77 ~~~~~~l~~~la~~~~~-~--------~v~~~~gg~ea~~~al~~~~~~~~~~-g---~~~~~vi~~~~~yhg~~~~~~~ 143 (395)
T 3nx3_A 77 NENIAAAAKNLAKASAL-E--------RVFFTNSGTESIEGAMKTARKYAFNK-G---VKGGQFIAFKHSFHGRTLGALS 143 (395)
T ss_dssp CHHHHHHHHHHHHHHTC-S--------EEEEESSHHHHHHHHHHHHHHHHHHT-T---CTTCEEEEETTCCCCSSHHHHT
T ss_pred CHHHHHHHHHHHHhcCC-C--------eEEEeCCHHHHHHHHHHHHHHHhhcc-C---CCCCEEEEEcCCcCCCCHHHHh
Confidence 34566777888888873 2 58999999999999998887643221 1 134445554444 444333332
Q ss_pred HcCC---------CCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHH
Q 037144 194 IVGI---------DRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAK 260 (502)
Q Consensus 194 ~~Gl---------g~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~ 260 (502)
..+- -...+..+|.+ |+++|+++++++ +.+|++....+++|.+.| +++|+++|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~-------d~~~l~~~l~~~------~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~ 210 (395)
T 3nx3_A 144 LTANEKYQKPFKPLISGVKFAKYN-------DISSVEKLVNEK------TCAIILESVQGEGGINPANKDFYKALRKLCD 210 (395)
T ss_dssp TCCCHHHHGGGCSCCSCEEEECTT-------CHHHHHTTCCTT------EEEEEEESEECTTSCEECCHHHHHHHHHHHH
T ss_pred hcCCcccccccCCCCCCcEEeCCC-------CHHHHHHhccCC------eEEEEEeCccCCCCcccCCHHHHHHHHHHHH
Confidence 2220 01155666542 799999988643 346777777788898877 999999999
Q ss_pred HhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCC
Q 037144 261 QFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEP 340 (502)
Q Consensus 261 ~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 340 (502)
+||+++|+|++|.++......+.....++ ..|.++++ |.++.+.+.|+++.++. .+.+.+... ....
T Consensus 211 ~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~~~~G~~~G~~~~~~~-~~~~~~~~~---~~~~------ 277 (395)
T 3nx3_A 211 EKDILLIADEIQCGMGRSGKFFAYEHAQI-LPDIMTSA--KALGCGLSVGAFVINQK-VASNSLEAG---DHGS------ 277 (395)
T ss_dssp HHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGTTTSCCEEEEECHH-HHHHHSCTT---CCSS------
T ss_pred HcCCEEEEEecccCCCcCCcchhHHhcCC-CCCEEEec--ccccCCCceEEEEEchh-hhhhhcCCc---ccCC------
Confidence 99999999999976532211111111122 46777654 98887778898877543 212222111 0000
Q ss_pred cccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEecCCCeeEEEEEeec
Q 037144 341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT----SDKRFEVAFPRNFSLVCFRVTP 416 (502)
Q Consensus 341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~----~~~~~~l~~~~~~~~v~f~~~~ 416 (502)
+. ....+.+.+++..+..-.-++..++..++.+++++.|+ +.|.+..+ ++..+++.+.+..
T Consensus 278 ----------~~----~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~ 342 (395)
T 3nx3_A 278 ----------TY----GGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKR-KGLGFMQGLSLDK 342 (395)
T ss_dssp ----------CB----SCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEECT
T ss_pred ----------CC----CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeEEEEEEEEeCC
Confidence 00 01233333333333110112344555555556555554 45555443 2334566666643
Q ss_pred CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144 417 SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQ 496 (502)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~ 496 (502)
.. ...++.+.+.++|.++.+. +..++|+++. ..++++++++++++|+
T Consensus 343 ~~----------------------------~~~~~~~~l~~~Gi~v~~~----~~~~iRi~~~-~~~t~e~i~~~l~~l~ 389 (395)
T 3nx3_A 343 SV----------------------------KVAKVIQKCQENALLLISC----GENDLRFLPP-LILQKEHIDEMSEKLR 389 (395)
T ss_dssp TS----------------------------CHHHHHHHHHHTTEECEEE----TTTEEEECCC-TTCCHHHHHHHHHHHH
T ss_pred cc----------------------------hHHHHHHHHHHCCCEEecC----CCCEEEEECC-CCCCHHHHHHHHHHHH
Confidence 20 0245677777788754333 3568999874 5567889999999999
Q ss_pred HHHHhC
Q 037144 497 EHLEAF 502 (502)
Q Consensus 497 ~~~~~~ 502 (502)
++.+++
T Consensus 390 ~~l~~~ 395 (395)
T 3nx3_A 390 KALKSF 395 (395)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 987653
No 187
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.81 E-value=1.2e-17 Score=172.31 Aligned_cols=316 Identities=10% Similarity=-0.058 Sum_probs=183.9
Q ss_pred hHHHHHHHHHHHHHhcCCCC-ccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHH
Q 037144 114 AVELENIVMDWLGQMLDLPK-SFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAA 192 (502)
Q Consensus 114 ~~~le~~~~~~l~~l~g~~~-~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa 192 (502)
..+...++.++++++++... + ..+||+||++|+..++.+++... + ++.+|+.....|.+...+.
T Consensus 84 ~~~~~~~l~~~la~~~~~~~~~-------~v~~~~ggsea~~~al~~~~~~~-~-------~~~vi~~~~~yhg~~~~~~ 148 (439)
T 3dxv_A 84 SNAPAVTLAERLLASFPGEGTH-------KIWFGHSGSDANEAAYRAIVKAT-G-------RSGVIAFAGAYHGCTVGSM 148 (439)
T ss_dssp EEHHHHHHHHHHHHTTTCTTTE-------EEEEESSHHHHHHHHHHHHHHHH-S-------CCEEEEETTCCCCSSHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCCC-------EEEEeCCHHHHHHHHHHHHHHHh-C-------CCEEEEECCCCCCCcHHHH
Confidence 34567778899999986533 2 58999999999999999876431 0 3456666666676666555
Q ss_pred HHcCCCC--C---------CEEEEecCCCCCccc-----CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----h
Q 037144 193 QIVGIDR--K---------NIRAIKTTKSSSYGL-----SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----L 252 (502)
Q Consensus 193 ~~~Glg~--~---------~v~~v~~~~~~~~~~-----d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l 252 (502)
.+.|... - .+..+|.+. .+.. |+++|+++|++. ....+.+|+++...+++|.+.| +
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l 224 (439)
T 3dxv_A 149 AFSGHSVQADAAKADGLILLPYPDPYRP--YRNDPTGDAILTLLTEKLAAV--PAGSIGAAFIEPIQSDGGLIVPPDGFL 224 (439)
T ss_dssp CC-------------CEEEECCCCSSSC--BTTBTTSHHHHHHHHHHHHTS--CTTCEEEEEECSSBSTTTSBCCCTTHH
T ss_pred hhcCCCchhhccccCCCCCCcEEcCCCc--ccccccHHHHHHHHHHHHHhc--CCCCEEEEEEccccCCCCCccCCHHHH
Confidence 4444310 0 013344332 1122 799999999511 1223567888888888999988 9
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCccccc
Q 037144 253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLK 332 (502)
Q Consensus 253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~ 332 (502)
++|.++|++||+++++|.+|+++............++ ..|.++ +.|.++.....|+++.++. .. +.+... ..
T Consensus 225 ~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~-~~di~s--~sK~~~~G~riG~~~~~~~-~~-~~~~~~---~~ 296 (439)
T 3dxv_A 225 RKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGF-VPDILV--LGKGLGGGLPLSAVIAPAE-IL-DCASAF---AM 296 (439)
T ss_dssp HHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTC-CCSEEE--ECGGGGTTSCCEEEEEEHH-HH-TSCSSS---SC
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCC-CCCEEE--EcchhcCCcceEEEEECHH-HH-hhhcCC---Cc
Confidence 9999999999999999999986422111011011122 366664 5699986667888877532 22 222110 00
Q ss_pred CccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCee
Q 037144 333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNFS 408 (502)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~~ 408 (502)
. .+. ..++.+.+++..+..-.-.+++++..++.+++++.|++ .+.+..+ ++..+
T Consensus 297 ~----------------~t~-----~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~ 354 (439)
T 3dxv_A 297 Q----------------TLH-----GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDI-RGRGL 354 (439)
T ss_dssp C----------------TTT-----TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETT
T ss_pred C----------------CCc-----ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEE
Confidence 0 001 13344444443332111134556666667777666654 4555443 33445
Q ss_pred EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144 409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV 488 (502)
Q Consensus 409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di 488 (502)
++.+.+....... ........++.+.+.++|.++.+.. ....++|++++ ...+++++
T Consensus 355 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~iRi~~~-~~~t~e~i 411 (439)
T 3dxv_A 355 ACGMELVCDRQSR--------------------EPARAETAKLIYRAYQLGLVVYYVG--MNGNVLEFTPP-LTITETDI 411 (439)
T ss_dssp EEEEEEEEETTTT--------------------EECHHHHHHHHHHHHHHTEECEEES--TTSCEEEECCC-TTCCHHHH
T ss_pred EEEEEEecCcccc--------------------CCCHHHHHHHHHHHHHCCcEEeecC--CCCCEEEEECC-CCCCHHHH
Confidence 5666553211000 0002234567777777887544332 22368999874 45677899
Q ss_pred HHHHHHHHHHHHh
Q 037144 489 RAAWTVVQEHLEA 501 (502)
Q Consensus 489 ~~~~~~l~~~~~~ 501 (502)
++++++|+++.++
T Consensus 412 ~~~l~~l~~~l~~ 424 (439)
T 3dxv_A 412 HKALDLLDRAFSE 424 (439)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988764
No 188
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.80 E-value=1.9e-18 Score=185.76 Aligned_cols=238 Identities=11% Similarity=0.111 Sum_probs=163.3
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCC
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDR 199 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~ 199 (502)
++.+.+++++|.+.. .++++|++.||..++.+... +++.|+++..+|.|+..++.+.|+
T Consensus 199 eaE~~lA~~fGa~~a--------~~v~nGts~An~~ai~al~~-----------pGD~VLv~r~~H~S~~~~l~lsGa-- 257 (715)
T 3n75_A 199 EAEQYIARVFNADRS--------YMVTNGTSTANKIVGMYSAP-----------AGSTILIDRNCHKSLTHLMMMSDV-- 257 (715)
T ss_dssp HHHHHHHHHHTCSEE--------EEESSHHHHHHHHHHHHHCC-----------TTCEEEEESSCCHHHHHHHHHSCC--
T ss_pred HHHHHHHHHhCCCCc--------eEECcHHHHHHHHHHHHhCC-----------CCCEEEECCCccHHHHHHHHHcCC--
Confidence 445668899998753 45566667888777766543 788999999999999999999999
Q ss_pred CCEEEEecCCCCCcc----c-----CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeec
Q 037144 200 KNIRAIKTTKSSSYG----L-----SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDA 270 (502)
Q Consensus 200 ~~v~~v~~~~~~~~~----~-----d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDa 270 (502)
.++.++.+.+ ++. + |+++|+++|++..+ .+.|.+|+++.+ |++|.+.|+++|+++|+++ +++||+
T Consensus 258 -~pv~v~~~~~-~~gi~~~i~~~~~d~e~Le~~l~~~~~-~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~--~livDE 331 (715)
T 3n75_A 258 -TPIYFRPTRN-AYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK--SIHFDS 331 (715)
T ss_dssp -EEEEECCCBC-TTCCBCCCCGGGGSHHHHHHHHHHSTT-CCSCSEEEEESS-CTTSEEECHHHHHHHCCCS--EEEEEC
T ss_pred -EEEEEecccc-ccccccCcccccCCHHHHHHHHhhCcC-ccCceEEEEECC-CCCCccCCHHHHHHHhCcC--cEEEcc
Confidence 9999987643 333 3 89999999987432 123557888888 8999999999999999876 389999
Q ss_pred ccccccccCccchhh--hcCCCCCCee---EEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCccccc
Q 037144 271 AYAGSACICPEFRHF--IDGVECVDSF---SFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEV 345 (502)
Q Consensus 271 A~g~~~~~~~~~~~~--~~~~~~aDsi---~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (502)
||+++..+.+..... +..-..+|.+ +.++||+++++.++|++++++... ...+.....++....
T Consensus 332 AH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~-~~~~~~~~~~~~STS---------- 400 (715)
T 3n75_A 332 AWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVN-EETFNEAYMMHTTTS---------- 400 (715)
T ss_dssp TTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCC-HHHHHHHHHHTSCSS----------
T ss_pred ccccccccCCccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhh-HHHHHHHHHhhcCCC----------
Confidence 999876555543311 1110136876 899999999988899999986521 111211111221110
Q ss_pred CCCcccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEecCC
Q 037144 346 GYKDWQITLCRRF-RSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKR------FEVAFPR 405 (502)
Q Consensus 346 ~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~------~~l~~~~ 405 (502)
-.. ...++-.+++.+-...-.+++++..+++++|++.|+++++ |+++.+.
T Consensus 401 ----------psy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~ 457 (715)
T 3n75_A 401 ----------PHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPD 457 (715)
T ss_dssp ----------CCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCS
T ss_pred ----------chHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcc
Confidence 000 1123334454443322345788999999999999988764 6777543
No 189
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.80 E-value=7.7e-19 Score=185.57 Aligned_cols=365 Identities=8% Similarity=0.022 Sum_probs=214.3
Q ss_pred CHHHHHHHHHHhhcCCCCcccc-cChhhHHHHHHHHHHHHHhc-C-CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHH
Q 037144 88 SVAGIVGEMLSSGFNVVGLDWI-SSPAAVELENIVMDWLGQML-D-LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRV 164 (502)
Q Consensus 88 ~~~~~~~~~l~~~~n~~~~~~~-~~p~~~~le~~~~~~l~~l~-g-~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~ 164 (502)
.+|..+.++....... .|. ...+..++++++.+++.+.+ + .+... ....++|+|||+|+..++.+...+.
T Consensus 116 ~~~~~v~a~~~~~~~~---~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~----~~~i~~t~G~t~al~~~~~~l~~~~ 188 (533)
T 3f6t_A 116 NRDKVVAEWVNGAVAN---NYPVPDRCLVNTEKIINYFLQELSYKDANLAE----QTDLFPTEGGTAAIVYAFHSLAENH 188 (533)
T ss_dssp CHHHHHHHHHHHHHTC---SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGG----GEEEEEEEHHHHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHHhC---CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCC----cceEEEECCHHHHHHHHHHHhhhhh
Confidence 3667776666655532 232 44567889999999997773 3 32210 0158999999999987776532110
Q ss_pred HHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCC--CCCcccCHHHHHHHHHHHHhcCCccEEEEEecC
Q 037144 165 LKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTK--SSSYGLSAESVLSQINLDVEAELIPLFLCATVG 242 (502)
Q Consensus 165 ~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~--~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g 242 (502)
+ -.+++.|+++...|.++..+++..|. .++.+|++. +.++.+|+++|+++++++ +.+|+++.+
T Consensus 189 l------~~~gd~Viv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~d~~~l~~~l~~~------~k~v~l~~p 253 (533)
T 3f6t_A 189 L------LKKGDKIAINEPIFTPYLRIPELKDY---ELVEVDLHSYEKNDWEIEPNEIEKLKDPS------IKALIVVNP 253 (533)
T ss_dssp S------SCTTCEEEEESSCCHHHHTSGGGGGS---EEEEECCCEETTTTSEECHHHHHHHSCTT------EEEEEEESS
T ss_pred c------cCCcCEEEEcCCCcHHHHHHHHHcCC---eEEEEEecCCcccCCCCCHHHHHHHhCCC------CeEEEEeCC
Confidence 0 01567899999999999999999999 999999864 345899999999988643 347888899
Q ss_pred CccccccCChh---HHHHHHH-HhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCc
Q 037144 243 TTAITAVDPLK---PLCDVAK-QFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDP 317 (502)
Q Consensus 243 tt~~G~idpl~---eI~~i~~-~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~ 317 (502)
+|++|.+-|.+ +|+++|+ +||+++++|.+|+.+.......... ....+.++.+++|.++.| ..+|+++.++.
T Consensus 254 ~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~---~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~ 330 (533)
T 3f6t_A 254 TNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSV---VPYNTMLVYSYSKLFGCTGWRLGVIALNEK 330 (533)
T ss_dssp CTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHH---SGGGEEEEEESHHHHTCGGGCEEEEEEESS
T ss_pred CCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhc---CCCCEEEEecCcccCCCcccceEEEEECcH
Confidence 99999997666 8888888 5899999999998655422222111 124457888999999743 44788888776
Q ss_pred hhhhhhhcCCcc---------cccCccCCCCCcccccCC--------CcccccCCCCCCchHHHH----HHHHh------
Q 037144 318 SCLLSTLSTNPQ---------YLKNEATDQEPKEQEVGY--------KDWQITLCRRFRSLKLWV----VIRNF------ 370 (502)
Q Consensus 318 ~~l~~~~~~~~~---------yl~~~~~~~~~~~~~~~~--------~~~~~~~sr~~~al~~~~----~l~~~------ 370 (502)
..+.......++ |-... . .+....+ .................+ ++..+
T Consensus 331 ~~~~~li~~l~~~~~~~~~~~~~~~~-~----~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~ 405 (533)
T 3f6t_A 331 NVFDDNIAHLDKVELRQLHKRYSSVV-L----DPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNG 405 (533)
T ss_dssp CHHHHHHHTSCHHHHHHHHHHHHTTC-S----CGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGG
T ss_pred HHHHHHHHhcchhhHHHHHhhhhccc-c----CcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccc
Confidence 332222211110 00000 0 0000000 000000000011112221 23333
Q ss_pred --cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhH-hh--H
Q 037144 371 --GVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEE-RT--N 445 (502)
Q Consensus 371 --g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~ 445 (502)
..+.++++.+++.+++++|.+.|. + ++++. ++..++++|.-.+.-... +. ..+.. .. +
T Consensus 406 ~~~~~~~~~~~~~~~~r~~~l~~~L~-~-~~~~~-~~~~g~~~~~~l~~~~~~-~~-------------g~~~~~~~~~~ 468 (533)
T 3f6t_A 406 GSDDPYIDIARKLVSERYDQLHDAMQ-A-PKDET-DTNTHYYSLIDIYRLAEK-IY-------------GKEFRDYLTNN 468 (533)
T ss_dssp GTBCHHHHHHHHHHHHHHHHHHHHHT-C-CCCCS-TTBCCSEEEEEHHHHHHH-HH-------------CHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcC-C-Ccccc-CCCceEEEEEehHhhhhh-cc-------------chHHHHHhhcc
Confidence 235677888888999999999997 5 45543 455555444322110000 00 00000 00 0
Q ss_pred HHHHHHHHHHH-hcCcEEEEeeeEC-CEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 446 EFNRELLESIN-VSGKVFMTHAIVG-GIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 446 ~~~~~l~~~l~-~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
....++..++. +.|.++.++..+. +..++|+++++ .++++|+++++.|.++.++
T Consensus 469 ~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a~--~~~e~i~~~i~~L~~~l~~ 524 (533)
T 3f6t_A 469 FEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQAN--LPTEDYALIGKQVLELLKE 524 (533)
T ss_dssp CCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESSS--SCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEee--CCHHHHHHHHHHHHHHHHH
Confidence 00123444444 4576544333332 25689999864 3567999999999988764
No 190
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.80 E-value=3.5e-18 Score=169.78 Aligned_cols=298 Identities=10% Similarity=0.010 Sum_probs=190.7
Q ss_pred HHHHHHHHHhhcC-CCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHh
Q 037144 90 AGIVGEMLSSGFN-VVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKI 168 (502)
Q Consensus 90 ~~~~~~~l~~~~n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~ 168 (502)
+..+.+.+...+. .....|.. +...++++.+.+++.+. ..+.+ ..++|+|+++++..++.+.
T Consensus 34 ~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~-~~~~~-------~v~~~~G~~~al~~~~~~~-------- 96 (335)
T 1uu1_A 34 PEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD-FLSKN-------NVSVGNGADEIIYVMMLMF-------- 96 (335)
T ss_dssp CHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS-SCCGG-------GEEEESSHHHHHHHHHHHS--------
T ss_pred CHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC-CCCHH-------HEEEcCChHHHHHHHHHHh--------
Confidence 3445555555552 22223422 23455555544444322 15443 6899999999987666543
Q ss_pred CccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 169 GRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
++.|+++ .+|.++...++..|. +++.+|+++ ++.+|+++| + .+.+|+++.++|++|.
T Consensus 97 ------gd~Vl~~-p~y~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l-----~------~~~~v~l~~p~nptG~ 153 (335)
T 1uu1_A 97 ------DRSVFFP-PTYSCYRIFAKAVGA---KFLEVPLTK--DLRIPEVNV-----G------EGDVVFIPNPNNPTGH 153 (335)
T ss_dssp ------SEEEECS-SSCHHHHHHHHHHTC---EEEECCCCT--TSCCCCCCC-----C------TTEEEEEESSCTTTCC
T ss_pred ------CCcEEEC-CCcHHHHHHHHHcCC---eEEEeccCC--CCCCCHHHc-----C------CCCEEEEeCCCCCCCC
Confidence 3568888 999999999999999 999999864 467888877 1 2347777889999999
Q ss_pred cCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCC
Q 037144 249 VDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTN 327 (502)
Q Consensus 249 idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~ 327 (502)
+-|.++|.++++..| ++++|++|+.+... .....+. ....+.++.+++|+++.| ..+|++++ ++..........
T Consensus 154 ~~~~~~l~~l~~~~~-~li~De~~~~~~~~--~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~ 228 (335)
T 1uu1_A 154 VFEREEIERILKTGA-FVALDEAYYEFHGE--SYVDFLK-KYENLAVIRTFSKAFSLAAQRVGYVVA-SEKFIDAYNRVR 228 (335)
T ss_dssp CCCHHHHHHHHHTTC-EEEEECTTHHHHCC--CCGGGGG-TCSSEEEEEESTTTTTCGGGCCEEEEE-CHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHhCC-EEEEECcchhhcch--hHHHHhh-hCCCEEEEecchhhcCCcccCeEEEEe-CHHHHHHHHHhc
Confidence 999999999999989 99999999764321 1111111 124567888999999744 45788887 443322111111
Q ss_pred cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 037144 328 PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG-VANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRN 406 (502)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~ 406 (502)
..| ....+..+++.+.+. .++++++.++..++++++.+.|++. ++++. ++.
T Consensus 229 ~~~--------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~ 280 (335)
T 1uu1_A 229 LPF--------------------------NVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYRIT-DSR 280 (335)
T ss_dssp CTT--------------------------CSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCC
T ss_pred CCC--------------------------CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CcEEc-CCC
Confidence 001 012233333333332 3467888888999999999999887 67654 445
Q ss_pred eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144 407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES 486 (502)
Q Consensus 407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~ 486 (502)
.+++.+.++. . ...++.+.|.++|..+.+ +..++|++++ +++
T Consensus 281 ~~~~~~~~~~--~---------------------------~~~~~~~~l~~~gi~v~~-----~~~~iRis~~----~~~ 322 (335)
T 1uu1_A 281 GNFVFVFMEK--E---------------------------EKERLLEHLRTKNVAVRS-----FREGVRITIG----KRE 322 (335)
T ss_dssp SSEEEEECCT--H---------------------------HHHHHHHHHHHHTEEEEE-----ETTEEEEECC----CHH
T ss_pred CeEEEEECCC--C---------------------------CHHHHHHHHHHCCEEEEE-----CCCeEEEEeC----CHH
Confidence 5555555431 0 123566677777865433 2358999985 346
Q ss_pred HHHHHHHHHHHH
Q 037144 487 HVRAAWTVVQEH 498 (502)
Q Consensus 487 di~~~~~~l~~~ 498 (502)
++++++++|+++
T Consensus 323 ~i~~~~~~l~~~ 334 (335)
T 1uu1_A 323 ENDMILRELEVF 334 (335)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHhh
Confidence 899999988753
No 191
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.80 E-value=3.9e-18 Score=175.13 Aligned_cols=316 Identities=11% Similarity=0.005 Sum_probs=189.7
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHH-HHHHHHHHHHHH-HhCccCC---CCeEEEe
Q 037144 106 LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALL-CTLTAARDRVLK-KIGRENI---SKLVVYS 180 (502)
Q Consensus 106 ~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~-~al~~a~~~~~~-~~~~~~~---~~~~v~~ 180 (502)
..|....+..++++.+.+|+ |++.+ ..++|+|++++++ ..+..+... + ..|.... .++.|++
T Consensus 70 ~~Y~~~~G~~~lr~~ia~~~----~~~~~-------~i~~t~G~~~al~l~~~~~~l~~--~~~~g~~~~~~~d~~~Vl~ 136 (422)
T 3d6k_A 70 RNYGGLLGIADIRELWAEAL----GLPAD-------LVVAQDGSSLNIMFDLISWSYTW--GNNDSSRPWSAEEKVKWLC 136 (422)
T ss_dssp TSSCCSSCCHHHHHHHHHHH----TCCGG-------GEEECSSCHHHHHHHHHHHHHHH--CCTTCSSCGGGSSCCEEEE
T ss_pred hCCCCCCCCHHHHHHHHHHh----CCChh-------HEEEecchHHHHHHHHHHHHhcC--cccccccccccCCCCEEEE
Confidence 35655555677776665554 67654 5899999999873 333222211 0 0000000 0336888
Q ss_pred CCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEE-EecCCccccccCChh---HHH
Q 037144 181 SDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLC-ATVGTTAITAVDPLK---PLC 256 (502)
Q Consensus 181 s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv-~t~gtt~~G~idpl~---eI~ 256 (502)
..++|..+..+++..|. +++.+|+++ + .+|+++|++++++. .+.+|+ .+.++|+||.+-|.+ +|+
T Consensus 137 ~~p~y~~~~~~~~~~g~---~~~~v~~~~--~-g~d~~~l~~~l~~~-----~~~~v~~~~~~~NPtG~~~~~~~l~~l~ 205 (422)
T 3d6k_A 137 PVPGYDRHFTITEHFGF---EMINVPMTD--E-GPDMGVVRELVKDP-----QVKGMWTVPVFGNPTGVTFSEQTCRELA 205 (422)
T ss_dssp EESCCHHHHHHHHHHTC---EEEEEEEET--T-EECHHHHHHHHTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHH
T ss_pred eCCccHHHHHHHHHcCC---EEEecCCCC--C-CCCHHHHHHHHhcC-----CCeEEEEcCCCCCCCCCCCCHHHHHHHH
Confidence 88899999999999999 999999975 2 39999999998641 133555 678999999998876 777
Q ss_pred HHHH-HhCCEEEeecccccccccCc--cchhhh-----cCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCc
Q 037144 257 DVAK-QFGIWVHVDAAYAGSACICP--EFRHFI-----DGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNP 328 (502)
Q Consensus 257 ~i~~-~~g~~lhVDaA~g~~~~~~~--~~~~~~-----~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~ 328 (502)
++|+ +||+++++|.+|+...+..+ ...... .+....+.+..+++|+++....+|+++.+ +... +.+....
T Consensus 206 ~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~-~~l~-~~l~~~~ 283 (422)
T 3d6k_A 206 EMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASS-KENI-EWYASHA 283 (422)
T ss_dssp HCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECC-HHHH-HHHHHHH
T ss_pred HHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeC-HHHH-HHHHHHH
Confidence 8887 99999999999974222111 111110 11224457778899995544568888875 3332 2221110
Q ss_pred ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhc----CCCe
Q 037144 329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV-----ANLRNFIRSHVGMAKLFERLVTS----DKRF 399 (502)
Q Consensus 329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~la~~l~~~l~~----~~~~ 399 (502)
..... ....+..+++...+.. +.+++..+++.+.++++.+.|.+ .+++
T Consensus 284 ~~~~~-----------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~ 340 (422)
T 3d6k_A 284 NVRGI-----------------------GPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVA 340 (422)
T ss_dssp HHHCS-----------------------CCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred HhhcC-----------------------CCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCce
Confidence 00000 0123444444444432 33445555555566666666643 4446
Q ss_pred EEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee-E-----CCEEE
Q 037144 400 EVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI-V-----GGIYV 473 (502)
Q Consensus 400 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~-----~g~~~ 473 (502)
++..+....++++.+.... ...+.+.+.+.|..+.+... + .+..+
T Consensus 341 ~~~~p~~g~~~~~~~~~~~-----------------------------~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~ 391 (422)
T 3d6k_A 341 KWTSPTGGYFISVDVVPGT-----------------------------ASRVVELAKEAGIALTGAGSSFPLHNDPNNEN 391 (422)
T ss_dssp EECCCSBSSCEEEEESTTC-----------------------------HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCE
T ss_pred EEeCCCcceEEEEECCCCC-----------------------------HHHHHHHHHHCCeEEEcCccccCCCCCCCCCe
Confidence 7654434445555553210 23455666677865443122 2 13578
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 474 LRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 474 lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+|++++. +++++++++++.|+++.++
T Consensus 392 iRis~~~--~~~e~i~~~~~~l~~~l~~ 417 (422)
T 3d6k_A 392 IRLAPSL--PPVAELEVAMDGFATCVLM 417 (422)
T ss_dssp EEECCSS--SCHHHHHHHHHHHHHHHHH
T ss_pred EEEecCC--CCHHHHHHHHHHHHHHHHH
Confidence 9999864 6778999999999887654
No 192
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.80 E-value=4.8e-18 Score=173.14 Aligned_cols=297 Identities=13% Similarity=0.043 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G 196 (502)
...++.+++++++|.+ ..++|+||++|+..++.+++.....+ +..+ ++.+|+.+...|.+...+....|
T Consensus 82 ~~~~l~~~la~~~~~~---------~v~~~~gg~~a~~~al~~~~~~~~~~-~~~g-~~~vi~~~~~y~~~~~~~~~~~~ 150 (406)
T 4adb_A 82 PVLRLAKKLIDATFAD---------RVFFCNSGAEANEAALKLARKFAHDR-YGSH-KSGIVAFKNAFHGRTLFTVSAGG 150 (406)
T ss_dssp HHHHHHHHHHHHSSCS---------EEEEESSHHHHHHHHHHHHHHHHHHH-TCTT-CCEEEEETTCCCCSSHHHHHHSS
T ss_pred HHHHHHHHHHhhCCCC---------eEEEeCcHHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCCcHHHhhccC
Confidence 4556778889998764 47999999999999998876532211 1110 23455555555555555555444
Q ss_pred CCC---------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc-----CChhHHHHHHHHh
Q 037144 197 IDR---------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV-----DPLKPLCDVAKQF 262 (502)
Q Consensus 197 lg~---------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i-----dpl~eI~~i~~~~ 262 (502)
... ..+..+|. .|+++|+++++++ +.+|+++ +.+++|.+ +++++|.++|++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~ 216 (406)
T 4adb_A 151 QPAYSQDFAPLPADIRHAAY-------NDINSASALIDDS------TCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRH 216 (406)
T ss_dssp CGGGTGGGCSCCSSEEEECT-------TCHHHHHTTCSTT------EEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHT
T ss_pred CccccccCCCCCCCceEeCC-------CcHHHHHHHhcCC------eEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHc
Confidence 210 14444443 3899999988633 3477777 78888754 5799999999999
Q ss_pred CCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144 263 GIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE 342 (502)
Q Consensus 263 g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 342 (502)
|+++|+|++|+++............++ ..|.+++ ||+++.+...|+++.++. .. +.+... ....
T Consensus 217 ~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~t~--sK~~~~G~r~G~~~~~~~-~~-~~~~~~---~~~~-------- 280 (406)
T 4adb_A 217 NALLIFDEVQTGVGRTGELYAYMHYGV-TPDLLTT--AKALGGGFPVGALLATEE-CA-RVMTVG---THGT-------- 280 (406)
T ss_dssp TCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECHH-HH-HTCCTT---SSCC--------
T ss_pred CCEEEEeccccCCCccchhHHHHhcCC-CCCEEEe--chhhcCCCCeEEEEEcHH-HH-hhhccC---CcCC--------
Confidence 999999999975433221111111122 4677765 999985566888776433 22 222111 0000
Q ss_pred cccCCCcccccCCCCCCchHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC----CeEEecCCCeeEEEEEee
Q 037144 343 QEVGYKDWQITLCRRFRSLKLW---VVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK----RFEVAFPRNFSLVCFRVT 415 (502)
Q Consensus 343 ~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~----~~~l~~~~~~~~v~f~~~ 415 (502)
+. ....+... .+++.+.. .++.++..++++++.+.|+++. .+.-. +....++.+.+.
T Consensus 281 --------~~----~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~ 344 (406)
T 4adb_A 281 --------TY----GGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINHRYGLFSEV-RGLGLLIGCVLN 344 (406)
T ss_dssp --------SS----TTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEEC
T ss_pred --------CC----CCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEE-EEEEEEEEEEEe
Confidence 00 01223333 33333322 5677788888888888887641 11111 112345566654
Q ss_pred cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144 416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV 495 (502)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l 495 (502)
... .....++.+.+.++|..+.+ .+..++|++++ ..+++++++++++.|
T Consensus 345 ~~~--------------------------~~~~~~~~~~l~~~gi~v~~----~~~~~iRi~~~-~~~~~e~i~~~~~~l 393 (406)
T 4adb_A 345 ADY--------------------------AGQAKQISQEAAKAGVMVLI----AGGNVVRFAPA-LNVSEEEVTTGLDRF 393 (406)
T ss_dssp TTT--------------------------TTCHHHHHHHHHHTTEECEE----SSTTEEEECCC-TTCCHHHHHHHHHHH
T ss_pred CCc--------------------------HHHHHHHHHHHHHCCcEEee----cCCCeEEEECC-CCCCHHHHHHHHHHH
Confidence 320 00134667777778865433 23568999864 557788999999999
Q ss_pred HHHHHh
Q 037144 496 QEHLEA 501 (502)
Q Consensus 496 ~~~~~~ 501 (502)
+++.++
T Consensus 394 ~~~l~~ 399 (406)
T 4adb_A 394 AAACEH 399 (406)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988754
No 193
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.80 E-value=2.7e-17 Score=168.66 Aligned_cols=297 Identities=10% Similarity=-0.005 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHhcCCC-CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHHH
Q 037144 117 LENIVMDWLGQMLDLP-KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQI 194 (502)
Q Consensus 117 le~~~~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~~ 194 (502)
...++.+.+++++|.+ .+ ..++|+||++|+..++.+++.. .+..|++ ....|.+...++..
T Consensus 87 ~~~~l~~~la~~~~~~~~~-------~v~~~~gg~ea~~~ai~~~~~~----------~~~~vi~~~p~yh~~~~~~~~~ 149 (419)
T 2eo5_A 87 PQLELAKKLVTYSPGNFQK-------KVFFSNSGTEAIEASIKVVKNT----------GRKYIIAFLGGFHGRTFGSISL 149 (419)
T ss_dssp HHHHHHHHHHHHSSCSSCE-------EEEEESSHHHHHHHHHHHHHTT----------SCCEEEEETTCCCCSSHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcCC-------EEEEeCchHHHHHHHHHHHHHh----------hCCcEEEECCCcCCCCHhhHhh
Confidence 3455667889999875 33 5899999999999998877642 1334444 44556555555544
Q ss_pred cCC------C----CCCEEEEecCCCCCcc----------------cCHHHHH-HHHHHHHhcCCccEEEEEecCCcccc
Q 037144 195 VGI------D----RKNIRAIKTTKSSSYG----------------LSAESVL-SQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 195 ~Gl------g----~~~v~~v~~~~~~~~~----------------~d~~~Le-~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
.|. + ...++.+|.+. +++ +|+++|+ ++|++.. ....+.+|+++...+++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~-~~~~~~~vi~~p~~~~tG 226 (419)
T 2eo5_A 150 TASKAVQRSIVGPFMPGVIHVPYPN--PYRNPWHINGYENPSELVNRVIEFIEDYIFVNLV-PPEEVAGIFFEPIQGEGG 226 (419)
T ss_dssp CCSCGGGGCSSCCCCTTEEEECCCC--SSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC-CGGGEEEEEECSSBTTTT
T ss_pred cCCccccccccCCCCCCCEEECCCc--cccccccccccccchhhHHHHHHHHHHHHHhhcc-CCCCEEEEEEeCccCCCC
Confidence 331 1 12678888753 222 4789999 8887420 001234566655556689
Q ss_pred ccCC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhh
Q 037144 248 AVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLS 322 (502)
Q Consensus 248 ~idp----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~ 322 (502)
.+-| +++|+++|++||+++|+|++|.++............++ ..|.++ +.|+++.+ .+.|+++.++. ..
T Consensus 227 ~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~-~~d~~t--~sK~~~~G~~riG~~~~~~~-~~-- 300 (419)
T 2eo5_A 227 YVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNT-VPDVIT--LAKALGGGIMPIGATIFRKD-LD-- 300 (419)
T ss_dssp SBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEE--ECGGGGTTTSCCEEEEEEGG-GC--
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCC-CCCEEE--ecccccCCccceEEEEEchH-hh--
Confidence 8666 99999999999999999999976532211111011122 457665 55998877 78899888653 21
Q ss_pred hhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 323 TLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
.+. ..... +. ....+.+.+++..+. .+.+..++..+++++|.+.|+++ +..+
T Consensus 301 ~~~---~~~~~-----------------t~----~~n~~~~~aa~aal~--~~~~~~~~~~~~~~~l~~~L~~~--~~~~ 352 (419)
T 2eo5_A 301 FKP---GMHSN-----------------TF----GGNALACAIGSKVID--IVKDLLPHVNEIGKIFAEELQGL--ADDV 352 (419)
T ss_dssp CC--------------------------CC----CCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTS--SSEE
T ss_pred cCC---cccCC-----------------CC----CCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHh--hhhe
Confidence 121 00000 00 012333333333331 12237788889999999999876 2222
Q ss_pred cCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCC
Q 037144 403 FPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSM 482 (502)
Q Consensus 403 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~ 482 (502)
++..+++.+.+.+. ..... +.+.+.++|.++.+. +..++|+++. ..
T Consensus 353 -~~~g~~~~i~~~~~---------------------------~~~~~-~~~~l~~~Gv~v~~~----~~~~lRis~~-~~ 398 (419)
T 2eo5_A 353 -RGIGLAWGLEYNEK---------------------------KVRDR-IIGESFKRGLLLLPA----GRSAIRVIPP-LV 398 (419)
T ss_dssp -EEETTEEEEECSCH---------------------------HHHHH-HHHHHHHTTEECEEE----TTTEEEECCC-TT
T ss_pred -EeeeEEEEEEEecC---------------------------ccHHH-HHHHHHHCCCEEecC----CCCEEEEECC-CC
Confidence 23345666655321 11234 777777778654433 2458999874 45
Q ss_pred CcHHHHHHHHHHHHHHHHh
Q 037144 483 TMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 483 t~~~di~~~~~~l~~~~~~ 501 (502)
++++++++++++|+++.++
T Consensus 399 ~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 399 ISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 6788999999999988765
No 194
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.79 E-value=1.8e-18 Score=174.79 Aligned_cols=296 Identities=13% Similarity=0.045 Sum_probs=177.2
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCC---CchhHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQ---THCAFQKA 191 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~---~H~s~~~a 191 (502)
..+++++.+++++++|.++.. ..++++|||+|+..++.+. +++.|+++.. .|+++...
T Consensus 57 ~~~~~~~~~~~a~~~g~~~~~------~~~~~~ggt~a~~~~~~~~-------------~gd~Vl~~~~~y~~~~~~~~~ 117 (374)
T 2aeu_A 57 SYFAEKVNEYGLKHLGGDEND------KCVGFNRTSSAILATILAL-------------KPKKVIHYLPELPGHPSIERS 117 (374)
T ss_dssp HHHHHHHHHHHHHHHTCCTTE------EEEEESSHHHHHHHHHHHH-------------CCSEEEEECSSSSCCTHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCcc------eEEEEcChHHHHHHHHHhC-------------CCCEEEEecCCCCccHHHHHH
Confidence 456778888889999984211 5799999999998887754 2456667766 46666667
Q ss_pred HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEE-EEEecCCcccc-ccCChhHHHHHHHHhCCEEEee
Q 037144 192 AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLF-LCATVGTTAIT-AVDPLKPLCDVAKQFGIWVHVD 269 (502)
Q Consensus 192 a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~-Vv~t~gtt~~G-~idpl~eI~~i~~~~g~~lhVD 269 (502)
++..|+ +++.+ +|+++|+++ ++ .+.+ |+++.++|++| ...|+++|.++|++||+++|+|
T Consensus 118 ~~~~g~---~~~~v---------~d~~~l~~~-~~------~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~D 178 (374)
T 2aeu_A 118 CKIVNA---KYFES---------DKVGEILNK-ID------KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVD 178 (374)
T ss_dssp HHHTTC---EEEEE---------SCHHHHHTT-CC------TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHcCc---EEEEe---------CCHHHHHhc-CC------CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEE
Confidence 888898 88777 278888876 32 2446 78888999999 8999999999999999999999
Q ss_pred cccccccc-cCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCC
Q 037144 270 AAYAGSAC-ICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYK 348 (502)
Q Consensus 270 aA~g~~~~-~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 348 (502)
++|+.+.. ..... .... .++|.++.++||+++++ +.|+++.++ .... .+.....+...
T Consensus 179 e~~~~~~~~~~~~~-~~~~--~~~di~~~S~sK~l~g~-~~G~~~~~~-~~~~-~l~~~~~~~~~--------------- 237 (374)
T 2aeu_A 179 DASGARVRLLFNQP-PALK--LGADLVVTSTDKLMEGP-RGGLLAGKK-ELVD-KIYIEGTKFGL--------------- 237 (374)
T ss_dssp CTTHHHHHHHTTCC-CHHH--HTCSEEEEETTSSSSSC-SCEEEEEEH-HHHH-HHHHHHHTTTC---------------
T ss_pred CCcccccccccccC-Cccc--cCCcEEEecCcccccCc-ceEEEEECH-HHHH-HHHHhhccccC---------------
Confidence 99977641 11010 0111 15799999999998764 788877754 3222 22110000000
Q ss_pred cccccCCCCCCchHH---HHHHHHhcHHHHHHHHHHHHHH----HHHHHHHHhcC---CCeEEecCCCeeEEEEEeecCc
Q 037144 349 DWQITLCRRFRSLKL---WVVIRNFGVANLRNFIRSHVGM----AKLFERLVTSD---KRFEVAFPRNFSLVCFRVTPSA 418 (502)
Q Consensus 349 ~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~~l----a~~l~~~l~~~---~~~~l~~~~~~~~v~f~~~~~~ 418 (502)
....+.+ ..+++.+..+.+++..++...+ .+.+.+.|..+ +++.+..++. +.+.+......
T Consensus 238 --------~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~-g~~~~~~~~~~ 308 (374)
T 2aeu_A 238 --------EAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPT-GFVIKRVYKDD 308 (374)
T ss_dssp --------BCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSS-EEEEEEEESSH
T ss_pred --------CCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCc-eEEEEeecccc
Confidence 0122223 3344433332344444444444 45556656554 3566543444 33333322110
Q ss_pred chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHH-HhcCcEEEEeeeE-CCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144 419 VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESI-NVSGKVFMTHAIV-GGIYVLRFAAGNSMTMESHVRAAWTVVQ 496 (502)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~-~g~~~lR~~~~~~~t~~~di~~~~~~l~ 496 (502)
...... ..++..++ .+.|.++.++..+ .+..++|++++.....+.+++++.++|+
T Consensus 309 ----------------------~~~~~~-~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~ 365 (374)
T 2aeu_A 309 ----------------------TINIKK-LIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIV 365 (374)
T ss_dssp ----------------------HHHHHH-HHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHH
T ss_pred ----------------------cccccc-hHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHH
Confidence 000001 11233333 3457654433222 2345899999765555556999999998
Q ss_pred HHHHh
Q 037144 497 EHLEA 501 (502)
Q Consensus 497 ~~~~~ 501 (502)
+++++
T Consensus 366 ~~l~~ 370 (374)
T 2aeu_A 366 ESIKM 370 (374)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87764
No 195
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.79 E-value=6e-18 Score=173.64 Aligned_cols=301 Identities=12% Similarity=0.030 Sum_probs=182.7
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHHHHHH
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~aa~~ 194 (502)
+...++.+++++++|.+ .+++|+||++|+..++.+++.....+ +.. ++ .+|+.+...|.+...++..
T Consensus 99 ~~~~~l~~~la~~~g~~---------~v~~~~ggteA~~~al~~~~~~~~~~-~~~--g~~~vi~~~~~yh~~~~~~~~~ 166 (420)
T 2pb2_A 99 EPALRLGRKLIDATFAE---------RVLFMNSGTEANETAFKLARHYACVR-HSP--FKTKIIAFHNAFHGRSLFTVSV 166 (420)
T ss_dssp HHHHHHHHHHHHHSSCS---------EEEEESSHHHHHHHHHHHHHHHHHHH-TCT--TCCEEEEETTCCCCSSHHHHHH
T ss_pred HHHHHHHHHHHhhCCCC---------eEEEeCCHHHHHHHHHHHHHHHhhhc-cCC--CCCEEEEEeCCcCCcCHHHHHh
Confidence 45566777888888742 58999999999999999887642211 111 23 3444455556666666666
Q ss_pred cCCC---------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc----cCChhHHHHHHHH
Q 037144 195 VGID---------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA----VDPLKPLCDVAKQ 261 (502)
Q Consensus 195 ~Glg---------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~----idpl~eI~~i~~~ 261 (502)
.|.. ...+..+|. .|+++|+++|+++ +.+|+++...+++|. .+++++|.++|++
T Consensus 167 ~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~~~------~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~ 233 (420)
T 2pb2_A 167 GGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMDDH------TCAVVVEPIQGEGGVQAATPEFLKGLRDLCDE 233 (420)
T ss_dssp SSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHH
T ss_pred cCCccccccCCCCCCCeEEecC-------CCHHHHHHHhccC------ceEEEEeCCcCCCCeecCCHHHHHHHHHHHHH
Confidence 5541 012555553 2899999988643 347777776666675 3789999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144 262 FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPK 341 (502)
Q Consensus 262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 341 (502)
||+++++|++|.++............++ ..|.+++ +|+++.+...|+++++++ . .+.+... . ..
T Consensus 234 ~gi~lI~Dev~~g~~~~g~~~~~~~~~~-~~diit~--sK~l~~G~~iG~~~~~~~-l-~~~l~~~--~--~~------- 297 (420)
T 2pb2_A 234 HQALLVFDEVQCGMGRTGDLFAYMHYGV-TPDILTS--AKALGGGFPVSAMLTTQE-I-ASAFHVG--S--HG------- 297 (420)
T ss_dssp TTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECHH-H-HTTCC--------C-------
T ss_pred cCCEEEEEcCCcCcccCCcHHHHHhcCC-CCCeEEe--cccccCCCceEEEEEhHH-H-HHhhcCC--C--cC-------
Confidence 9999999999965432211111111122 4687754 799987777999888653 2 2222110 0 00
Q ss_pred ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeEEEEEeecC
Q 037144 342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFPRNFSLVCFRVTPS 417 (502)
Q Consensus 342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~~~~~~v~f~~~~~ 417 (502)
. ++ ......+..+..+++.+.. +++.++..++++++.+.|+++ |.+..+ ++..+++.+.+...
T Consensus 298 -~-------t~-~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~v~~~~~ 364 (420)
T 2pb2_A 298 -S-------TY-GGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDI-RGMGLLIGAELKPK 364 (420)
T ss_dssp -C-------EE-CCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEECGG
T ss_pred -c-------cc-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecceEEEEEECCC
Confidence 0 01 0111122333444554433 356777888888888888764 433322 23345666665421
Q ss_pred cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHH
Q 037144 418 AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQE 497 (502)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~ 497 (502)
. .....++.+.+.++|.++.+. +..++|+++. ...++++++++++.|++
T Consensus 365 ~--------------------------~~~~~~l~~~l~~~Gi~v~~~----~~~~iRl~~~-~~~t~eei~~~~~~l~~ 413 (420)
T 2pb2_A 365 Y--------------------------KGRARDFLYAGAEAGVMVLNA----GADVMRFAPS-LVVEEADIHEGMQRFAQ 413 (420)
T ss_dssp G--------------------------TTCHHHHHHHHHHTTEECEES----STTEEEECCC-TTCCHHHHHHHHHHHHH
T ss_pred c--------------------------hHHHHHHHHHHHHCCCEEEeC----CCCEEEEECC-CCCCHHHHHHHHHHHHH
Confidence 0 001245677777778644332 2458999974 45678899999999998
Q ss_pred HHHh
Q 037144 498 HLEA 501 (502)
Q Consensus 498 ~~~~ 501 (502)
+.++
T Consensus 414 ~l~~ 417 (420)
T 2pb2_A 414 AVGK 417 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 196
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.79 E-value=2.2e-17 Score=169.86 Aligned_cols=307 Identities=10% Similarity=-0.015 Sum_probs=181.4
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC-CCchhHHHHHHHcC
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD-QTHCAFQKAAQIVG 196 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~~aa~~~G 196 (502)
..++.+.++++++.+.+ ..+||+||++|+..++.+++... +..| .++..|++++ ..|.+...++...|
T Consensus 88 ~~~l~~~la~~~~~~~~-------~v~~~~ggtea~~~ai~~~~~~~-~~~g---~~~~~vi~~~~~yh~~~~~~~~~~~ 156 (429)
T 1s0a_A 88 AIELCRKLVAMTPQPLE-------CVFLADSGSVAVEVAMKMALQYW-QAKG---EARQRFLTFRNGYHGDTFGAMSVCD 156 (429)
T ss_dssp HHHHHHHHHHHSCTTCC-------EEEEESSHHHHHHHHHHHHHHHH-HHHT---CCCCEEEEETTCCCCSSHHHHTTSC
T ss_pred HHHHHHHHHHhCCCCCC-------EEEEeCCHHHHHHHHHHHHHHHh-cccC---CCCCeEEEECCCCCCCchhhhhhcC
Confidence 34455678888876543 68999999999999998776421 1111 1244555555 45655444443333
Q ss_pred CC----------CCCEEEEecCCC----CCcccCHHHHHHHHHHHHhcCCccEEEEEecC-CccccccCC----hhHHHH
Q 037144 197 ID----------RKNIRAIKTTKS----SSYGLSAESVLSQINLDVEAELIPLFLCATVG-TTAITAVDP----LKPLCD 257 (502)
Q Consensus 197 lg----------~~~v~~v~~~~~----~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g-tt~~G~idp----l~eI~~ 257 (502)
.. ...++.++++.. ..+.+|+++|+++|++.. ..+.+|+++.. ++++|.+-| +++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~ 233 (429)
T 1s0a_A 157 PDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHR---HEIAAVIIEPIVQGAGGMRMYHPEWLKRIRK 233 (429)
T ss_dssp TTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHT---TTEEEEEECSSEECTTTCEEBCTHHHHHHHH
T ss_pred CchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCC---CCEEEEEEeecccCCCCcccCCHHHHHHHHH
Confidence 10 114566776421 113689999999997521 12346666655 688998766 999999
Q ss_pred HHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCC--cccccCc
Q 037144 258 VAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTN--PQYLKNE 334 (502)
Q Consensus 258 i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~--~~yl~~~ 334 (502)
+|++||+++|+|++|.++............++ ..|.++++ |+++.+ .+.|+++.++ ... +.+... ..+...
T Consensus 234 l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~G~~~iG~~~~~~-~~~-~~l~~~~~~~~~~~- 307 (429)
T 1s0a_A 234 ICDREGILLIADEIATGFGRTGKLFACEHAEI-APDILCLG--KALTGGTMTLSATLTTR-EVA-ETISNGEAGCFMHG- 307 (429)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTSSSCCEEEEECH-HHH-HHHHTSTTSSCSCC-
T ss_pred HHHHcCCEEEEeehhhCCcccchHHHhhhcCC-CCCEEEec--ccccCCCccceEEEeCH-HHH-HHhhcCCCcccccC-
Confidence 99999999999999976422111110001122 46777654 998877 7899988764 332 223211 000000
Q ss_pred cCCCCCcccccCCCcccccCCCCCCchH---HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCee
Q 037144 335 ATDQEPKEQEVGYKDWQITLCRRFRSLK---LWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVAFPRNFS 408 (502)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~---~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~~~~~~~ 408 (502)
.+-....+. +.++++.+.. .+..++..++++++.+.|+++ |++..+ ++..+
T Consensus 308 -------------------~t~~~n~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~~~g~ 364 (429)
T 1s0a_A 308 -------------------PTFMGNPLACAAANASLAILES---GDWQQQVADIEVQLREQLAPARDAEMVADV-RVLGA 364 (429)
T ss_dssp -------------------CTTTTCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHGGGGGCTTEEEE-EEETT
T ss_pred -------------------CCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhcCCCEEEE-EEeeE
Confidence 000112233 3334443322 245677788899999999775 566533 22334
Q ss_pred EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144 409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV 488 (502)
Q Consensus 409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di 488 (502)
++.+.+... . + ..++.+.|.++|.+ +.+. + .++|+++. ..++++++
T Consensus 365 ~~~~~~~~~-~-------------------------~--~~~l~~~l~~~Gi~-v~~~---~-~~iRis~~-~~~t~e~i 410 (429)
T 1s0a_A 365 IGVVETTHP-V-------------------------N--MAALQKFFVEQGVW-IRPF---G-KLIYLMPP-YIILPQQL 410 (429)
T ss_dssp EEEEEESSC-B-------------------------C--HHHHHHHHHHTTEE-CCCB---T-TEEEECCC-TTCCHHHH
T ss_pred EEEEEECCc-c-------------------------c--HHHHHHHHHHCCCE-Eecc---C-CEEEEECC-CCCCHHHH
Confidence 566655321 0 0 23566677777864 3332 2 58999964 45678899
Q ss_pred HHHHHHHHHHHHh
Q 037144 489 RAAWTVVQEHLEA 501 (502)
Q Consensus 489 ~~~~~~l~~~~~~ 501 (502)
++++++|+++.++
T Consensus 411 ~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 411 QRLTAAVNRAVQD 423 (429)
T ss_dssp HHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987643
No 197
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.79 E-value=3.9e-18 Score=174.22 Aligned_cols=354 Identities=12% Similarity=0.020 Sum_probs=206.5
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCcccccCCCCCCHHHHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCC--C
Q 037144 56 VETILQDVQEHIVPGITHWQSPNYFAYFPATSSVAGIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLP--K 133 (502)
Q Consensus 56 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~--~ 133 (502)
.-.+.+.+.+.-.+...+.....|+++...+. +.+.+..........|...++..++++.+.+|+....+.+ .
T Consensus 28 i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~-----v~~a~~~a~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~ 102 (409)
T 4eu1_A 28 ILGLGQDFRMDPAKRKVNLSIGVYRDDADQPF-----VLECVKQATLGTNMDYAPVTGIASFVEEAQKLCFGPTCAALRD 102 (409)
T ss_dssp HHHHHHHHHHCCCSSCEECCCSSCCCTTSCCC-----CCHHHHTCCCCSCCCCCCTTCCHHHHHHHHHHHHCSSCHHHHT
T ss_pred HHHHHHHHhhCCCcCceeeeeeEEECCCCCEe-----ecHHHHhcCccccccCCCCCCcHHHHHHHHHHHcCCCchhhcc
Confidence 34555555544333333333333333322222 3334444443444566666677888888888873222111 2
Q ss_pred ccCcCCCCcE--EEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCC
Q 037144 134 SFLFSGNGGG--VIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSS 211 (502)
Q Consensus 134 ~~~~~~~~~g--~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~ 211 (502)
+ .. ..|.||+.++..+....+.. . .+++.|+++..+|.++...++..|. +++.+|++.++
T Consensus 103 ~-------~i~~~~~~~g~ga~~~~~~~~~~~-~-------~~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~ 164 (409)
T 4eu1_A 103 G-------RIASCQTLGGTGALRIGGDLLNRF-V-------ANCNRIYGPDVGYPNHESIFAKAGM---ELTPYSYYDPA 164 (409)
T ss_dssp T-------CEEEEEESHHHHHHHHHHHHGGGT-S-------SSCCEEEEESSCCTHHHHHHHHTTC---EEEEECCEETT
T ss_pred C-------ceeeeecccchHHHHHHHHHHHHh-c-------CCCCEEEEeCCCcHhHHHHHHHcCC---eEEEEEeecCc
Confidence 1 34 34888888886554333211 0 1567889999999999999999999 99999985334
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHHHHHhCCEEEeecccccccccCc--cchhh-
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHF- 285 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~--~~~~~- 285 (502)
++.+|+++|++++++.. ....+++.+.++|+||.+-+ +++|+++|++||+++++|.+|+.+..... .....
T Consensus 165 ~~~~d~~~l~~~l~~~~---~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~ 241 (409)
T 4eu1_A 165 TKGLNLAGMLECLDKAP---EGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPR 241 (409)
T ss_dssp TTEECHHHHHHHHHHSC---TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHH
T ss_pred CCcCcHHHHHHHHHhCC---CCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHH
Confidence 67999999999997521 12456777889999999976 55599999999999999999987654321 01111
Q ss_pred -hcCCCCCC-eeEEccCCcCCCC-CcceEE--EeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCc
Q 037144 286 -IDGVECVD-SFSFNPHKWLFTT-LDCCCL--WVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRS 360 (502)
Q Consensus 286 -~~~~~~aD-si~~~~hK~l~~p-~~~g~~--~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~a 360 (502)
+.+. ..+ .++.+++|.++.| ..+|++ ++.++............+..... .+ ...
T Consensus 242 ~~~~~-~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~-----------------~~---~~~ 300 (409)
T 4eu1_A 242 HLVDM-VPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMY-----------------NN---PPL 300 (409)
T ss_dssp HHHTT-SSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHH-----------------SS---CCH
T ss_pred HHHhh-CCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhc-----------------CC---CCh
Confidence 1111 223 4556789999744 456776 56665421111100000000000 00 022
Q ss_pred hHHHHHHHHhc--------HHHHHHHHHHHHHHHHHHHHHHhcCCC---eEEecCCCeeEEEEEeecCcchhhhhhcccC
Q 037144 361 LKLWVVIRNFG--------VANLRNFIRSHVGMAKLFERLVTSDKR---FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKN 429 (502)
Q Consensus 361 l~~~~~l~~~g--------~~g~~~~~~~~~~la~~l~~~l~~~~~---~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 429 (502)
+..+++...+. .+.++++.+++.++++++.+.|++.+. +++. ++..+++.|. ...
T Consensus 301 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~~~~~--~~~----------- 366 (409)
T 4eu1_A 301 YGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHI-ERQVGMMAYT--GLT----------- 366 (409)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHH-HHSCSSEEEC--CCC-----------
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccee-cCCceEEEEe--CCC-----------
Confidence 33333333332 334677888899999999999988731 5544 3445555552 110
Q ss_pred CCcccccccchhHhhHHHHHHHHHHHH-hcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 037144 430 GTYDQYRQFSEEERTNEFNRELLESIN-VSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~ 499 (502)
. ++.+++. +.|.. +.+. .|++++. .++ ++|++++++|+++.
T Consensus 367 ---------------~----~~~~~ll~~~gv~-v~p~-------~Ri~~~~-~~~-~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 367 ---------------R----EQVELLRSEYHIY-MTLN-------GRAAVSG-LNS-TNVEYVSQAIHNVT 408 (409)
T ss_dssp ---------------H----HHHHHHHHHHCEE-CCTT-------CEEEGGG-CCT-TTHHHHHHHHHHHH
T ss_pred ---------------H----HHHHHHHHcCCEE-EcCC-------CEEEEEe-cCH-hhHHHHHHHHHHHh
Confidence 1 1233333 34653 3332 3888864 344 47999999998875
No 198
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.79 E-value=4.5e-17 Score=167.74 Aligned_cols=303 Identities=8% Similarity=-0.032 Sum_probs=168.9
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC-CCchhHHHHHHH
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD-QTHCAFQKAAQI 194 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~~aa~~ 194 (502)
+...++.+.+++++|.+ .++|++||++|+..++.+++.......|.. .++..|++.+ ..|.+...++.+
T Consensus 107 ~~~~~l~~~la~~~g~~---------~v~~~~sGseA~~~al~~a~~~~~~~~g~~-~gr~~vi~~~~~yhg~~~~~~~~ 176 (433)
T 1z7d_A 107 VPLGICERYLTNLLGYD---------KVLMMNTGAEANETAYKLCRKWGYEVKKIP-ENMAKIVVCKNNFSGRTLGCISA 176 (433)
T ss_dssp HHHHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHHHHHHHTSCCC-TTCCEEEEETTC-----------
T ss_pred HHHHHHHHHHHhhcCCC---------eEEEeCCHHHHHHHHHHHHHHHhhhccCCC-CCCCeEEEEeCCcCCcchhhhcc
Confidence 34445566677777742 589999999999999998875321111100 0224555544 445555555554
Q ss_pred cCC-------C--CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC----ChhHHHHHHHH
Q 037144 195 VGI-------D--RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD----PLKPLCDVAKQ 261 (502)
Q Consensus 195 ~Gl-------g--~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id----pl~eI~~i~~~ 261 (502)
.|. + ...++.+|. .|+++|+++|+. ..+.+|+++...+++|.+- ++++|.++|++
T Consensus 177 ~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~ 244 (433)
T 1z7d_A 177 STTKKCTSNFGPFAPQFSKVPY-------DDLEALEEELKD-----PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKK 244 (433)
T ss_dssp ---------------CEEEECT-------TCHHHHHHHHTS-----TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHH
T ss_pred cCCccccccCCCCCCCeEEeCC-------CCHHHHHHHhCC-----CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHH
Confidence 441 0 014555553 289999999851 1244677666566688764 79999999999
Q ss_pred hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCC
Q 037144 262 FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEP 340 (502)
Q Consensus 262 ~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~ 340 (502)
||++|++|++|.++......+.....++ ..|.++ ++|+++.. ...|+++.++ ... +.+... . ..
T Consensus 245 ~g~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t--~sK~l~~G~~~~G~v~~~~-~~~-~~l~~~--~--~~------ 309 (433)
T 1z7d_A 245 YNVLFVADEVQTGLGRTGKLLCVHHYNV-KPDVIL--LGKALSGGHYPISAVLAND-DIM-LVIKPG--E--HG------ 309 (433)
T ss_dssp TTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEE--ECGGGGTTSSCCEEEEECH-HHH-TTCCTT--C--CC------
T ss_pred cCCEEEEecCccCCCcCCcchhhHhcCC-CCCEEE--ECccccCCCCCeEEEEECH-HHH-hhhccc--c--cc------
Confidence 9999999999976422111111011122 568775 56999865 5688888764 322 222110 0 00
Q ss_pred cccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeEEEEEeec
Q 037144 341 KEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFPRNFSLVCFRVTP 416 (502)
Q Consensus 341 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~~~~~~v~f~~~~ 416 (502)
.++ .+.+..+....++++.+.. .++.++..++++++.+.|+++ |.+..+ ++..+++.+.+..
T Consensus 310 ---------~t~-~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~-~~~g~~~~i~~~~ 375 (433)
T 1z7d_A 310 ---------STY-GGNPLAASICVEALNVLIN---EKLCENAEKLGGPFLENLKRELKDSKIVRDV-RGKGLLCAIEFKN 375 (433)
T ss_dssp ---------CTT-TTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE-EEETTEEEEEECT
T ss_pred ---------ccC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeeeeEEEEEEcc
Confidence 011 0111122233344444322 245677788888888888653 332222 2334566666543
Q ss_pred CcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHH
Q 037144 417 SAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQ 496 (502)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~ 496 (502)
.. ....++.+.+.++|.++ .+. +..++|+++. ...++++|+++++.|+
T Consensus 376 ~~---------------------------~~~~~~~~~l~~~Gv~v-~~~---~~~~iRi~~~-~~~t~e~i~~~l~~l~ 423 (433)
T 1z7d_A 376 EL---------------------------VNVLDICLKLKENGLIT-RDV---HDKTIRLTPP-LCITKEQLDECTEIIV 423 (433)
T ss_dssp TT---------------------------CCHHHHHHHHHHTTEEC-CEE---TTTEEEECCC-TTCCHHHHHHHHHHHH
T ss_pred Ch---------------------------hHHHHHHHHHHHCCeEE-ecC---CCCEEEEECC-cCCCHHHHHHHHHHHH
Confidence 10 00245677777778643 332 3468999874 4567889999999998
Q ss_pred HHHHh
Q 037144 497 EHLEA 501 (502)
Q Consensus 497 ~~~~~ 501 (502)
++.++
T Consensus 424 ~~l~~ 428 (433)
T 1z7d_A 424 KTVKF 428 (433)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87653
No 199
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.79 E-value=1.1e-17 Score=170.41 Aligned_cols=220 Identities=12% Similarity=0.119 Sum_probs=153.8
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHH
Q 037144 110 SSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQ 189 (502)
Q Consensus 110 ~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (502)
..|...++|+ .++++.|.+ ..+++++|++|+.. +..... +++.|+++...|.+..
T Consensus 65 ~~p~~~~l~~----~la~l~g~~---------~~~~~~sG~~Ai~~-~~~l~~-----------~gd~Vi~~~~~y~~~~ 119 (400)
T 3nmy_A 65 HNPTRFAYER----CVAALEGGT---------RAFAFASGMAATST-VMELLD-----------AGSHVVAMDDLYGGTF 119 (400)
T ss_dssp CCHHHHHHHH----HHHHHHTCS---------EEEEESSHHHHHHH-HHTTSC-----------TTCEEEEESSCCHHHH
T ss_pred CCHHHHHHHH----HHHHHhCCC---------CEEEecCHHHHHHH-HHHHcC-----------CCCEEEEeCCCchHHH
Confidence 3455555554 477777765 35778888888765 322111 5678888888888655
Q ss_pred HHH-----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCC
Q 037144 190 KAA-----QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGI 264 (502)
Q Consensus 190 ~aa-----~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~ 264 (502)
... ...|+ +++.++.+ |+++|+++|+++ +.+|++..++|++|.+.|+++|+++|++||+
T Consensus 120 ~~~~~~~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~e~~~np~G~~~~l~~i~~la~~~g~ 183 (400)
T 3nmy_A 120 RLFERVRRRTAGL---DFSFVDLT-------DPAAFKAAIRAD------TKMVWIETPTNPMLKLVDIAAIAVIARKHGL 183 (400)
T ss_dssp HHHHHTHHHHHCC---EEEEECTT-------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHTTC
T ss_pred HHHHHhhHhhcCe---EEEEECCC-------CHHHHHHHhccC------CCEEEEECCCCCCCeeecHHHHHHHHHHcCC
Confidence 543 33588 88888763 889999998654 3488889999999999999999999999999
Q ss_pred EEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-c-ce-EEEeeCchhhhhhhcCCcccccCccCCCCCc
Q 037144 265 WVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-D-CC-CLWVKDPSCLLSTLSTNPQYLKNEATDQEPK 341 (502)
Q Consensus 265 ~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~-~g-~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 341 (502)
++++|++|+.+.+..+. . . ++|.++.++||++++|. . .| +++++++.... .+.....+.
T Consensus 184 ~livDe~~~~~~~~~~~-~-~-----g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~-~l~~~~~~~---------- 245 (400)
T 3nmy_A 184 LTVVDNTFASPMLQRPL-S-L-----GADLVVHSATKYLNGHSDMVGGIAVVGDNAELAE-QMAFLQNSI---------- 245 (400)
T ss_dssp EEEEECTTTHHHHCCGG-G-G-----TCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHH-HHHHHHHHH----------
T ss_pred EEEEECCCcccccCChh-h-c-----CCcEEEecCccccCCCCCcceeEEEEeCCHHHHH-HHHHHHHhc----------
Confidence 99999999865543321 1 1 79999999999998773 2 34 45555554322 221100011
Q ss_pred ccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 037144 342 EQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAF 403 (502)
Q Consensus 342 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~ 403 (502)
+....++..|.+++. .+.+..++++..++++++.+.|++.|.++-+.
T Consensus 246 -------------g~~~~~~~a~~~l~~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~ 292 (400)
T 3nmy_A 246 -------------GGVQGPFDSFLALRG--LKTLPLRMRAHCENALALAQWLETHPAIEKVI 292 (400)
T ss_dssp -------------CCBCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEE
T ss_pred -------------CCCCCHHHHHHHHHh--HhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEE
Confidence 111245666777764 45677888999999999999999999887653
No 200
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.78 E-value=7.1e-18 Score=172.34 Aligned_cols=233 Identities=12% Similarity=0.066 Sum_probs=159.5
Q ss_pred HHHHHHHhcCCCCccCcCCCCcEEE---cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC-CCchhHH-------
Q 037144 121 VMDWLGQMLDLPKSFLFSGNGGGVI---QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD-QTHCAFQ------- 189 (502)
Q Consensus 121 ~~~~l~~l~g~~~~~~~~~~~~g~~---t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~------- 189 (502)
+.+.+++++|.+. .++ ++||++||..++.+... +++.|+++. ..|....
T Consensus 78 Le~~lA~l~g~e~---------alv~p~~~sGt~Ai~~al~all~-----------pGD~Vl~~~~~~y~~~~~~~g~~~ 137 (427)
T 3i16_A 78 LDAVYARVFNTES---------ALVRPHFVNGTHALGAALFGNLR-----------PGNTMLSVCGEPYDTLHDVIGITE 137 (427)
T ss_dssp HHHHHHHHHTCSE---------EEEETTCCSHHHHHHHHHHHHCC-----------TTCEEEESSSSCCGGGHHHHTCSC
T ss_pred HHHHHHHHhCCcc---------eEEeCCCccHHHHHHHHHHHHhC-----------CCCEEEEeCCCccHHHHHHHhccc
Confidence 3356889999864 355 88999999777765533 677888887 7776555
Q ss_pred ----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec----CCccccccCChhHHHHHHHH
Q 037144 190 ----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV----GTTAITAVDPLKPLCDVAKQ 261 (502)
Q Consensus 190 ----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~----gtt~~G~idpl~eI~~i~~~ 261 (502)
+.++..|+ +++.+|+++ ++.+|+++|++++++. ..+.+|+++. +++++|.+.|+++|+++|++
T Consensus 138 ~~~~~~l~~~G~---~~~~v~~~~--~g~~D~e~l~~~l~~~----~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~ 208 (427)
T 3i16_A 138 NSNMGSLKEFGI---NYKQVDLKE--DGKPNLEEIEKVLKED----ESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKN 208 (427)
T ss_dssp CCSSCCTGGGTC---EEEECCCCT--TSSCCHHHHHHHHHTC----TTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHH
T ss_pred cchHHHHHHcCC---EEEEecCcc--CCCcCHHHHHHHhhCC----CCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHH
Confidence 34456688 899999875 4689999999999731 1134788887 89999999999999999999
Q ss_pred --hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC--cceEEEeeCchhhhhhhcC-CcccccCccC
Q 037144 262 --FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL--DCCCLWVKDPSCLLSTLST-NPQYLKNEAT 336 (502)
Q Consensus 262 --~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~--~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~ 336 (502)
+|+++|||++|+.+........ .++|.++.++||+++.+. ..|+++.+ +......... ....+..
T Consensus 209 ~~~g~~livD~a~~~~~~~~~p~~------~gaDiv~~S~sK~lgg~g~~~gG~i~~~-~~li~~l~~~~~~~~~g~--- 278 (427)
T 3i16_A 209 IRKDIICFVDNCYGEFMDTKEPTD------VGADLIAGSLIKNIGGGIAPTGGYLAGT-KDCIEKTSYRLTVPGIGG--- 278 (427)
T ss_dssp HCTTSEEEEECTTTTTSSSSCGGG------GTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTGG---
T ss_pred hCCCCEEEEECCCccccccCCccc------cCCeEEEecCcccCCCCCCceEEEEEEC-HHHHHHHHHhcccCccCc---
Confidence 9999999999987653222111 178999999999998632 23666554 4433222110 1111110
Q ss_pred CCCCcccccCCCcccccCCCCCCchH-HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCee-----EE
Q 037144 337 DQEPKEQEVGYKDWQITLCRRFRSLK-LWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFS-----LV 410 (502)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~sr~~~al~-~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~-----~v 410 (502)
..+ .++. .|.+++. ...+..++++..+++.++++.|+++ ++++. |.... ++
T Consensus 279 ----------------~~~---~~~~~a~~~l~g--l~~~~~r~~~~~~~a~~la~~L~~~-g~~V~-p~~~~~~~~~i~ 335 (427)
T 3i16_A 279 ----------------ECG---STFGVVRSMYQG--LFLAPHISMEALKGAILCSRIMELA-GFEVM-PKYDEKRSDIIQ 335 (427)
T ss_dssp ----------------GCC---CCTTCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEE-SCTTSCCSSSCE
T ss_pred ----------------cCC---ccHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCCCCCCccEEE
Confidence 001 1122 4555543 4556788999999999999999998 57774 43333 77
Q ss_pred EEEee
Q 037144 411 CFRVT 415 (502)
Q Consensus 411 ~f~~~ 415 (502)
+|.+.
T Consensus 336 ~i~l~ 340 (427)
T 3i16_A 336 SIKFN 340 (427)
T ss_dssp EEECS
T ss_pred EEEEC
Confidence 77764
No 201
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.78 E-value=3.2e-17 Score=168.61 Aligned_cols=329 Identities=11% Similarity=0.040 Sum_probs=175.6
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHH-HHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQK-AAQ 193 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~-aa~ 193 (502)
.+...++.+|+++.++.+.+ ..++|+||++|+..++.+++.....+ |.. ++..|++.+.+++.... +..
T Consensus 71 ~~~~~~l~~~la~~~~~~~~-------~v~~~~gg~ea~~~al~~~~~~~~~~-g~~--~~~~vi~~~~~yhg~~~~~~~ 140 (430)
T 3i4j_A 71 SDVLEEYAGRLARFVGLPTF-------RFWAVSGGSEATESAVKLARQYHVER-GEP--GRFKVITRVPSYHGASLGSLA 140 (430)
T ss_dssp EHHHHHHHHHHHHHTTCTTC-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCT--TCCEEEEETTC----------
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCcHHHHHHHHHHHHHHHHHhc-CCC--CCcEEEEEeCCcCCCCccccc
Confidence 34566778899999987544 58999999999999999887653322 111 34455555555443333 222
Q ss_pred HcCCCC---------C--CEEEEecCCC-CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc-cccccCC----hhHHH
Q 037144 194 IVGIDR---------K--NIRAIKTTKS-SSYGLSAESVLSQINLDVEAELIPLFLCATVGTT-AITAVDP----LKPLC 256 (502)
Q Consensus 194 ~~Glg~---------~--~v~~v~~~~~-~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt-~~G~idp----l~eI~ 256 (502)
..|... . .+..+|.+.. ..+..|+++|+++|++... ..+.+|+++...+ ++|.+-+ +++|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~--~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~ 218 (430)
T 3i4j_A 141 ASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGP--ETVAAFMAEPVVGASDAALAPAPGYYERVR 218 (430)
T ss_dssp ---------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCG--GGEEEEEECSSCCGGGTTCCCCTTHHHHHH
T ss_pred ccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCC--CCEEEEEEcCcccCcCCcccCCHHHHHHHH
Confidence 222100 0 2344554321 0134678999999975310 1245666666667 8888777 99999
Q ss_pred HHHHHhCCEEEeecccccccccCccchhhhc-CCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCC-cccccC
Q 037144 257 DVAKQFGIWVHVDAAYAGSACICPEFRHFID-GVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTN-PQYLKN 333 (502)
Q Consensus 257 ~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~-~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~-~~yl~~ 333 (502)
++|++||+++|+|.+|.++............ ++ ..|.+++ .|.++.. ...|+++.+ +... +.+... ..+...
T Consensus 219 ~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~-~~di~t~--sK~l~~G~~r~G~~~~~-~~i~-~~~~~~~~~~~~~ 293 (430)
T 3i4j_A 219 DICDEAGIIFIADEVMSGMGRCGSPLALSRWSGV-TPDIAVL--GKGLAAGYAPLAGLLAA-PQVY-ETVMGGSGAFMHG 293 (430)
T ss_dssp HHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTC-CCSEEEE--CGGGTTTSSCCEEEEEC-HHHH-HHHHHTTCBCCCC
T ss_pred HHHHHcCCEEEEechhhCCCcccchhhhhhhcCC-CCcEEEE--cccccCCccccEEEEEC-HHHH-HHHhccCCccccc
Confidence 9999999999999999765332111110011 22 4567765 4998865 667888774 3332 222211 111111
Q ss_pred ccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEecCCCeeE
Q 037144 334 EATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT----SDKRFEVAFPRNFSL 409 (502)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~----~~~~~~l~~~~~~~~ 409 (502)
. +-...++.+.+++..+..-.-+++.++..++.+++++.|+ +.|++..+ ++..++
T Consensus 294 ~--------------------t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~ 352 (430)
T 3i4j_A 294 F--------------------TYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQV-RGTGLL 352 (430)
T ss_dssp C--------------------TTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTE
T ss_pred C--------------------CCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEE
Confidence 0 0011233333333333110012344455555555555543 56666655 334456
Q ss_pred EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEee-eE--CCEEEEEEEecCCCCcHH
Q 037144 410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHA-IV--GGIYVLRFAAGNSMTMES 486 (502)
Q Consensus 410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~--~g~~~lR~~~~~~~t~~~ 486 (502)
+.+.+..... ...........++.+.+.++|.++.+.. .. .+..++|+++. ...+++
T Consensus 353 ~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~-~~~t~e 412 (430)
T 3i4j_A 353 LGVVLGDLAT-------------------GQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPP-LSITAA 412 (430)
T ss_dssp EEEEEC-------------------------------CHHHHHHHHHHTTEECC-----------CEEEECCC-TTCCHH
T ss_pred EEEEeccccc-------------------cCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECC-CCCCHH
Confidence 6665542100 0000000113567778888887543331 11 13568999975 446777
Q ss_pred HHHHHHHHHHHHHHh
Q 037144 487 HVRAAWTVVQEHLEA 501 (502)
Q Consensus 487 di~~~~~~l~~~~~~ 501 (502)
++++++++|+++.++
T Consensus 413 ~i~~~l~~l~~~l~~ 427 (430)
T 3i4j_A 413 EVDGLLALLAGALED 427 (430)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988764
No 202
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.78 E-value=7.8e-18 Score=171.40 Aligned_cols=233 Identities=8% Similarity=-0.025 Sum_probs=159.0
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEE---cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC-CCchhHHHH----
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVI---QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD-QTHCAFQKA---- 191 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~---t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~~a---- 191 (502)
++.+.+++++|.+. .++ ++||++||..++.+... +++.|+++. ..|......
T Consensus 63 ~Le~~lA~l~g~e~---------alv~p~~~sGt~Ai~~al~all~-----------~GD~Vl~~~~~~y~~~~~~~~~~ 122 (409)
T 3jzl_A 63 TLERVYATVFKTEA---------ALVRPQIISGTHAISTVLFGILR-----------PDDELLYITGQPYDTLEEIVGIR 122 (409)
T ss_dssp HHHHHHHHHHTCSE---------EEEETTSCSHHHHHHHHHHHHCC-----------TTCEEEECSSSCCTTHHHHHTSS
T ss_pred HHHHHHHHHhCCCc---------EEEECCCccHHHHHHHHHHHhcC-----------CCCEEEEeCCCCcHhHHHHHhcc
Confidence 34456788888764 355 88999999877766533 677888887 777776643
Q ss_pred ------HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec----CCccccccCChhHHHHHHHH
Q 037144 192 ------AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV----GTTAITAVDPLKPLCDVAKQ 261 (502)
Q Consensus 192 ------a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~----gtt~~G~idpl~eI~~i~~~ 261 (502)
++..|+ +++.+|+++ +|.+|+++|+++|+++ +.+|+++. +++++|.+.|+++|+++|++
T Consensus 123 g~~~~~l~~~G~---~~~~v~~~~--~g~~d~e~l~~ai~~~------tklV~i~~s~g~p~nptg~v~~l~~I~~la~~ 191 (409)
T 3jzl_A 123 KQGQGSLKDFHI---GYSSVPLLE--NGDVDFPRIAKKMTPK------TKMIGIQRSRGYADRPSFTIEKIKEMIVFVKN 191 (409)
T ss_dssp SSSSSCTGGGTC---EEEECCCCT--TSCCCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHH
T ss_pred cchhhHHHHcCC---EEEEeCCCC--CCCcCHHHHHHhccCC------CeEEEEECCCCCCCCCcCccccHHHHHHHHHh
Confidence 355688 899999875 4789999999998654 34788888 99999999999999999999
Q ss_pred --hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-c-ceEEEeeCchhhhhhhcC-CcccccCccC
Q 037144 262 --FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-D-CCCLWVKDPSCLLSTLST-NPQYLKNEAT 336 (502)
Q Consensus 262 --~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~-~g~~~~r~~~~l~~~~~~-~~~yl~~~~~ 336 (502)
+|+++|||++|+.+....... . .++|.++.++||+++++. . .|+++. +++........ ...++...
T Consensus 192 ~~~~~~livD~a~~~~~~~~~p~-~-----~g~Div~~S~sK~lgg~~~~~GG~v~~-~~~li~~l~~~~~~~~~g~~-- 262 (409)
T 3jzl_A 192 INPEVIVFVDNCYGEFVEYQEPP-E-----VGADIIAGSLIKNPGGGLAKTGGYIAG-KEALVDLCGYRLTTPGIGRE-- 262 (409)
T ss_dssp HCTTCEEEEECTTCTTTSSCCSG-G-----GTCSEEEEETTSGGGTTTCSSCEEEEE-CHHHHHHHHHHHSCTTTGGG--
T ss_pred hCCCCEEEEeCCcccccccCCcc-c-----cCCeEEEECccccCCccCCceEEEEEe-CHHHHHHHHHHhcccccccc--
Confidence 999999999998765322111 1 178999999999998653 2 355554 45443322110 11111110
Q ss_pred CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCee-----EEE
Q 037144 337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFS-----LVC 411 (502)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~-----~v~ 411 (502)
.+-... ..|++++ |......++++..+++.++++.|+++ ++++. +.... +++
T Consensus 263 -----------------~g~~~~--~~~~~l~--gl~~~~~r~~~~~~~a~~la~~L~~~-g~~v~-p~~~~~~~~~i~~ 319 (409)
T 3jzl_A 263 -----------------AGASLY--SLLEMYQ--GFFLAPHVTAQAIKGARFTAAMLAEF-GVEAD-PVWDAPRTDLIQS 319 (409)
T ss_dssp -----------------CCCCTT--CHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEE-SCTTSCCSSSCCE
T ss_pred -----------------ccccHH--HHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCCCCCccEEEE
Confidence 000001 1234443 33556778889999999999999998 67874 32323 666
Q ss_pred EEee
Q 037144 412 FRVT 415 (502)
Q Consensus 412 f~~~ 415 (502)
|.+.
T Consensus 320 i~l~ 323 (409)
T 3jzl_A 320 VSFH 323 (409)
T ss_dssp EECS
T ss_pred EEeC
Confidence 7664
No 203
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.77 E-value=1.9e-16 Score=163.73 Aligned_cols=347 Identities=13% Similarity=0.067 Sum_probs=192.0
Q ss_pred HHHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144 91 GIVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170 (502)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (502)
..+.+.+...+...... .......+...++.+.++++++.+.+ ..++|+||++|+..++.+++.... ..|.
T Consensus 69 ~~v~~a~~~~~~~~~~~-~~~~~~~~~~~~l~~~la~~~~~~~~-------~v~~~~ggsea~~~al~~~~~~~~-~~g~ 139 (449)
T 3a8u_X 69 KEIQEAVAKQLSTLDYS-PGFQYGHPLSFQLAEKITDLTPGNLN-------HVFFTDSGSECALTAVKMVRAYWR-LKGQ 139 (449)
T ss_dssp HHHHHHHHHHTTTCSCC-CSSSCCCHHHHHHHHHHHTTSSTTEE-------EEEEESSHHHHHHHHHHHHHHHHH-HTTC
T ss_pred HHHHHHHHHHHHhCCCc-cccccCCHHHHHHHHHHHHhCCCCCC-------EEEEcCcHHHHHHHHHHHHHHHHH-hcCC
Confidence 34555555555432210 00012233455677788888875443 589999999999999988875321 1111
Q ss_pred cCCCCeEEE-eCCCCchhHHHHHHHcCC-------C--CCCEEEEecCCC--CC-cccC--------HHHHHHHHHHHHh
Q 037144 171 ENISKLVVY-SSDQTHCAFQKAAQIVGI-------D--RKNIRAIKTTKS--SS-YGLS--------AESVLSQINLDVE 229 (502)
Q Consensus 171 ~~~~~~~v~-~s~~~H~s~~~aa~~~Gl-------g--~~~v~~v~~~~~--~~-~~~d--------~~~Le~~i~~~~~ 229 (502)
. +++.|+ .+...|.+...++...|. + ...++.++++.. .+ ..+| +++|+++|++..
T Consensus 140 ~--~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~- 216 (449)
T 3a8u_X 140 A--TKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHD- 216 (449)
T ss_dssp T--TCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHC-
T ss_pred C--CCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcC-
Confidence 0 234444 455566665556565542 1 114566665421 00 0256 999999997531
Q ss_pred cCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCC
Q 037144 230 AELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT 305 (502)
Q Consensus 230 ~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~ 305 (502)
...+.+|+++...+++|.+-| +++|.++|++||+++++|++|.++......+.....++ ..|.+++ +|+++.
T Consensus 217 -~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~di~s~--sK~l~~ 292 (449)
T 3a8u_X 217 -ASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGV-TPDLMCI--AKQVTN 292 (449)
T ss_dssp -GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGT
T ss_pred -CCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCC-CCCEEEE--cccccC
Confidence 012346666665567998888 99999999999999999999965432211111011122 4676654 599875
Q ss_pred C-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHH---HHHHHHhcHHHHHHHHHH
Q 037144 306 T-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKL---WVVIRNFGVANLRNFIRS 381 (502)
Q Consensus 306 p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~ 381 (502)
. ...|++++++ ... +.+...... .. ... + ....+-....+.+ .++++.+.. .++.++
T Consensus 293 G~~~~G~~~~~~-~~~-~~l~~~~~~---~~------~~~--~---~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~ 353 (449)
T 3a8u_X 293 GAIPMGAVIAST-EIY-QTFMNQPTP---EY------AVE--F---PHGYTYSAHPVACAAGLAALCLLQK---ENLVQS 353 (449)
T ss_dssp TSSCCEEEEEEH-HHH-HHHHTCSSC---TT------SCS--S---CCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHH
T ss_pred CCCceEEEEECH-HHH-HHhhccCcc---cc------ccc--c---cccCCCcccHHHHHHHHHHHHHHHh---cCHHHH
Confidence 3 4588888764 332 233221000 00 000 0 0000001122333 333443322 246778
Q ss_pred HHHHHHHHHHHHhcCCCeEEec--CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcC
Q 037144 382 HVGMAKLFERLVTSDKRFEVAF--PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSG 459 (502)
Q Consensus 382 ~~~la~~l~~~l~~~~~~~l~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 459 (502)
..++.+++++.|++++++.++. ++..+++.+.+..... . . ......+.+.+.++|
T Consensus 354 ~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~--------------------~-~--~~~~~~~~~~l~~~G 410 (449)
T 3a8u_X 354 VAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDG--------------------D-A--IVRPFEAGMALWKAG 410 (449)
T ss_dssp HHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTT--------------------B-S--SHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcc--------------------c-c--cccHHHHHHHHHHCC
Confidence 8888999999998753332211 2334566666643210 0 0 000124666777778
Q ss_pred cEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 460 KVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 460 ~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.++... + .++|+++. ...+++++++++++|+++.++
T Consensus 411 v~v~~~----g-~~iRis~~-~~~t~~~i~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 411 FYVRFG----G-DTLQFGPT-FNSKPQDLDRLFDAVGEVLNK 446 (449)
T ss_dssp EECEEE----T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred cEEecC----C-CEEEEECC-CcCCHHHHHHHHHHHHHHHHH
Confidence 654332 3 68999964 456788999999999988764
No 204
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.77 E-value=8.9e-17 Score=165.82 Aligned_cols=303 Identities=10% Similarity=-0.007 Sum_probs=179.5
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCC-CeEEEeCCCCchhHHHHHHHcC
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENIS-KLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~-~~~v~~s~~~H~s~~~aa~~~G 196 (502)
..++.+++++++|.+ .+++++||++|+..++.+++.......|.. .+ +.+|+.....|.+...++...|
T Consensus 120 ~~~l~~~la~~~g~~---------~v~~~~sGseA~~~al~~~~~~~~~~~g~~-~g~~~vi~~~~~yhg~~~~~~~~~g 189 (439)
T 2oat_A 120 LGEYEEYITKLFNYH---------KVLPMNTGVEAGETACKLARKWGYTVKGIQ-KYKAKIVFAAGNFWGRTLSAISSST 189 (439)
T ss_dssp HHHHHHHHHHHHTCS---------EEEEESSHHHHHHHHHHHHHHHHHHTTCCC-TTCCEEEEETTCCCCSSHHHHTTCC
T ss_pred HHHHHHHHHHhcCCC---------EEEEeCCHHHHHHHHHHHHHHHhhhccCCC-CCCCeEEEEcCCCCCCCHhHhhcCC
Confidence 334555666666632 489999999999999998875322111100 02 3444445555666666655544
Q ss_pred C-------C--CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC----ChhHHHHHHHHhC
Q 037144 197 I-------D--RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD----PLKPLCDVAKQFG 263 (502)
Q Consensus 197 l-------g--~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id----pl~eI~~i~~~~g 263 (502)
. + ...++.+|.+ |+++|+++|+.. .+.+|+++...+++|.+. ++++|.++|++||
T Consensus 190 ~~~~~~~~~p~~~~v~~~~~~-------d~~~le~~l~~~-----~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g 257 (439)
T 2oat_A 190 DPTSYDGFGPFMPGFDIIPYN-------DLPALERALQDP-----NVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQ 257 (439)
T ss_dssp CHHHHTTSCSCCTTEEEECSS-------CHHHHHHHTTST-----TEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTT
T ss_pred ChhcccCCCCCCCCeEEeCCC-------CHHHHHHHhCCC-----CEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 1 1 0256677642 899999998511 244666666556688765 7999999999999
Q ss_pred CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcc
Q 037144 264 IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKE 342 (502)
Q Consensus 264 ~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 342 (502)
+++++|++|.++......+.....++ ..|.+ +++|+++.+ ...|++++++. .. +.+.. .. ..
T Consensus 258 illI~DEv~~g~g~~g~~~~~~~~~~-~~Di~--t~sK~l~~G~~~~G~v~~~~~-~~-~~l~~---~~-~~-------- 320 (439)
T 2oat_A 258 VLFIADEIQTGLARTGRWLAVDYENV-RPDIV--LLGKALSGGLYPVSAVLCDDD-IM-LTIKP---GE-HG-------- 320 (439)
T ss_dssp CEEEEECTTTTTTTTSSSSGGGGGTC-CCSEE--EECGGGGTTSSCCEEEEECHH-HH-TTSCT---TS-SC--------
T ss_pred CEEEEeccccCCccCCcchhHHHhCC-CCcEE--EecccccCCCCCeEEEEECHH-HH-hccCC---CC-cc--------
Confidence 99999999965422111111011122 46876 456999865 56888887643 22 22211 00 00
Q ss_pred cccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--cCCCeeEEEEEeecCcch
Q 037144 343 QEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA--FPRNFSLVCFRVTPSAVM 420 (502)
Q Consensus 343 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~--~~~~~~~v~f~~~~~~~~ 420 (502)
.++ .+.+..+....++++.+.. .++.++..++++++++.|+++ ++.++ .++..+++.+.+....
T Consensus 321 -------~t~-~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~g~~~~v~l~~~~-- 386 (439)
T 2oat_A 321 -------STY-GGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRNELMKL-PSDVVTAVRGKGLLNAIVIKETK-- 386 (439)
T ss_dssp -------CSS-TTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTS-CTTTEEEEEEETTEEEEEECCCS--
T ss_pred -------cCC-CcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeeeEEEEEEecCc--
Confidence 011 0111122233344544432 256778888999999999886 33221 1223345666554310
Q ss_pred hhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
. ....++.+++.++|.++ .+ .+..++|+++. ...++++++++++.|+++.+
T Consensus 387 -------------------~-----~~~~~l~~~l~~~Gv~v-~~---~~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~ 437 (439)
T 2oat_A 387 -------------------D-----WDAWKVCLRLRDNGLLA-KP---THGDIIRFAPP-LVIKEDELRESIEIINKTIL 437 (439)
T ss_dssp -------------------S-----CCHHHHHHHHHHTTEEC-CB---SSSSEEEECCC-TTCCHHHHHHHHHHHHHHHH
T ss_pred -------------------c-----HHHHHHHHHHHHCCeEE-ec---CCCCEEEEECc-cCCCHHHHHHHHHHHHHHHH
Confidence 0 00235677777778643 33 23568999874 45678899999999999876
Q ss_pred hC
Q 037144 501 AF 502 (502)
Q Consensus 501 ~~ 502 (502)
++
T Consensus 438 ~~ 439 (439)
T 2oat_A 438 SF 439 (439)
T ss_dssp TC
T ss_pred hC
Confidence 53
No 205
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.77 E-value=3.4e-17 Score=168.58 Aligned_cols=320 Identities=13% Similarity=0.021 Sum_probs=181.5
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCe-EEEeCCCCchhHHHHHHH
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKL-VVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~aa~~ 194 (502)
....++.+.+++++|.+.+ ..++|+||++|+..++.+++... ++. +|+.+...|.+...+...
T Consensus 85 ~~~~~l~~~la~~~~~~~~-------~v~~~~gg~ea~~~a~~~~~~~~---------~~~~vi~~~~~yhg~~~~~~~~ 148 (433)
T 1zod_A 85 RPVVDLATRLANITPPGLD-------RALLLSTGAESNEAAIRMAKLVT---------GKYEIVGFAQSWHGMTGAAASA 148 (433)
T ss_dssp HHHHHHHHHHHHHSCTTCC-------EEEEESCHHHHHHHHHHHHHHHH---------TCCEEEEETTCCCCSSHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhh---------CCCeEEEECCCcCCCChhHHhh
Confidence 3455667778888887543 58999999999999998776421 333 444444456555444433
Q ss_pred cCC--------CCCCEEEEecCCC--C--------CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----h
Q 037144 195 VGI--------DRKNIRAIKTTKS--S--------SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----L 252 (502)
Q Consensus 195 ~Gl--------g~~~v~~v~~~~~--~--------~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l 252 (502)
.+. -...++.++++.. . .+.+|+++|+++|++. ....+.+|+++...+++|.+-| +
T Consensus 149 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l 226 (433)
T 1zod_A 149 TYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQ--SSGNLAAFIAEPILSSGGIIELPDGYM 226 (433)
T ss_dssp CCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHH--CCSCEEEEEECSEETTTTCEECCTTHH
T ss_pred cCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhc--CCCCeEEEEEccccCCCCcccCCHHHH
Confidence 221 0124666665320 0 1235799999999753 1123446666555567897655 9
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCccccc
Q 037144 253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLK 332 (502)
Q Consensus 253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~ 332 (502)
++|+++|++||+++++|++|+++............++ ..|.++ +.|+++.+.+.|+++.++ ... +.+... .+..
T Consensus 227 ~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~-~~di~s--~sK~~~~G~~ig~~~~~~-~~~-~~~~~~-~~~~ 300 (433)
T 1zod_A 227 AALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGV-TPDILT--LSKTLGAGLPLAAIVTSA-AIE-ERAHEL-GYLF 300 (433)
T ss_dssp HHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEE--ECHHHHTTSSCEEEEECH-HHH-HHHHHT-TCCC
T ss_pred HHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCC-CCCEEE--ecccccCCCCeeEEEEhH-HHH-HhhccC-CCCC
Confidence 9999999999999999999986532211111011122 356665 459998777889988864 332 222211 1110
Q ss_pred CccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCee
Q 037144 333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNFS 408 (502)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~~ 408 (502)
.. +. .+......++.++++.+..+ ++.++..++++++++.|++ .|.+..+ ++..+
T Consensus 301 ~~----------------t~-~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~ 359 (433)
T 1zod_A 301 YT----------------TH-VSDPLPAAVGLRVLDVVQRD---GLVARANVMGDRLRRGLLDLMERFDCIGDV-RGRGL 359 (433)
T ss_dssp CC----------------TT-TTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETT
T ss_pred CC----------------CC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEE
Confidence 00 00 00011112223344433222 3566677778888887765 3544433 33445
Q ss_pred EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144 409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV 488 (502)
Q Consensus 409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di 488 (502)
++.+.+....... .. + .....++.+.+.++|.++.+...+.+..++|++++ ...+++++
T Consensus 360 ~~~i~~~~~~~~~---------------~~-~----~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~-~~~t~~~i 418 (433)
T 1zod_A 360 LLGVEIVKDRRTK---------------EP-A----DGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPP-LTVSEDEI 418 (433)
T ss_dssp EEEEEEEEETTTT---------------EE-C----TTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCC-TTCCHHHH
T ss_pred EEEEEEecCcccc---------------CC-C----hHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECC-cCCCHHHH
Confidence 6666554210000 00 0 01134567777777865433332222468999864 45678899
Q ss_pred HHHHHHHHHHHHh
Q 037144 489 RAAWTVVQEHLEA 501 (502)
Q Consensus 489 ~~~~~~l~~~~~~ 501 (502)
+++++.|+++.++
T Consensus 419 ~~~l~~l~~~l~~ 431 (433)
T 1zod_A 419 DLGLSLLGQAIER 431 (433)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987764
No 206
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.76 E-value=2.9e-16 Score=162.60 Aligned_cols=330 Identities=12% Similarity=0.034 Sum_probs=182.4
Q ss_pred hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHH
Q 037144 114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQ 193 (502)
Q Consensus 114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~ 193 (502)
..+...++.++++++++.+. ..+||+|||+|+..|+.+++...... +.. .++.+|+.....|.....+..
T Consensus 89 ~~~~~~~la~~l~~~~~~~~--------~v~~~~ggseA~~~al~~~~~~~~~~-g~~-~~~~vi~~~~~yhg~~~~~~~ 158 (452)
T 3n5m_A 89 SHEPAIKLAEKLNEWLGGEY--------VIFFSNSGSEANETAFKIARQYYAQK-GEP-HRYKFMSRYRGYHGNTMATMA 158 (452)
T ss_dssp EEHHHHHHHHHHHHHHTSCE--------EEEEESSHHHHHHHHHHHHHHHHHTT-TCT-TCCEEEEETTCCCCSSHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCc--------eEEEeCchHHHHHHHHHHHHHHHHhc-CCC-CCCEEEEECCCcCCCCHHHHh
Confidence 34566778889999987643 37999999999999999988542211 110 023344444444544333333
Q ss_pred HcCCC---------CCCEEEEecCCCCC----------cccCHHHHHHHHHHHHhcCCccEEEEEecC-CccccccCC--
Q 037144 194 IVGID---------RKNIRAIKTTKSSS----------YGLSAESVLSQINLDVEAELIPLFLCATVG-TTAITAVDP-- 251 (502)
Q Consensus 194 ~~Glg---------~~~v~~v~~~~~~~----------~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g-tt~~G~idp-- 251 (502)
..|.. ...+..++....-. +..++++||++|++. ....+.+|+++.. .+ +|.+-|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~~~vi~ep~~~n-~G~~~~~~ 235 (452)
T 3n5m_A 159 ATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWE--LSETIAAFIMEPIITG-GGILMAPQ 235 (452)
T ss_dssp SCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHH--CGGGEEEEEECSSBTT-TTCBCCCT
T ss_pred cCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhc--CCCCEEEEEEccccCC-CCeeeCCH
Confidence 32321 11355555421100 111289999999732 1122456777776 68 998876
Q ss_pred --hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcC--
Q 037144 252 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLST-- 326 (502)
Q Consensus 252 --l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~-- 326 (502)
+++|+++|++||++|++|.+|.++......+.....++ ..|.+++ .|.++.+ .+.|+++.++. . .+.+..
T Consensus 236 ~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t~--sK~l~~G~~~ig~~~~~~~-i-~~~~~~~~ 310 (452)
T 3n5m_A 236 DYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDV-KPDIITM--AKGITSAYLPLSATAVKRE-I-YEAFKGKG 310 (452)
T ss_dssp THHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEE--CGGGGTTSSCCEEEEEEHH-H-HGGGCSSS
T ss_pred HHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCC-CCCEEee--cccccCCCcceEEEEECHH-H-HHHHhhcc
Confidence 99999999999999999999976532221111111122 4677765 4988766 67888877543 2 233322
Q ss_pred -CcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEE
Q 037144 327 -NPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT----SDKRFEV 401 (502)
Q Consensus 327 -~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~----~~~~~~l 401 (502)
...++.. .+-...++.+.+++..+..-.-++++++..++.+++++.|+ +.|.+..
T Consensus 311 ~~~~~~~~--------------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 370 (452)
T 3n5m_A 311 EYEFFRHI--------------------NTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGD 370 (452)
T ss_dssp TTCSCCCC--------------------CSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred CCCCcccc--------------------CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 1111110 00011334444444333211113345555666666666654 4455544
Q ss_pred ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeee--ECCEEEEEEEec
Q 037144 402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAI--VGGIYVLRFAAG 479 (502)
Q Consensus 402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~g~~~lR~~~~ 479 (502)
+ ++...++.+.+...... .... ......++.+.+.++|.++.+... ..+..++|+++.
T Consensus 371 ~-~~~g~~~~i~~~~~~~~------------------~~~~-~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~ 430 (452)
T 3n5m_A 371 I-RGKGLLVGIELVNDKET------------------KEPI-DNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPP 430 (452)
T ss_dssp E-EESSSCEEEEEEEETTT------------------TEEC-CHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCC
T ss_pred E-EEEEEEEEEEEecCCcc------------------cCCC-CHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECC
Confidence 4 23334455544321100 0000 012234677778888975443321 112578999864
Q ss_pred CCCCcHHHHHHHHHHHHHHHHhC
Q 037144 480 NSMTMESHVRAAWTVVQEHLEAF 502 (502)
Q Consensus 480 ~~~t~~~di~~~~~~l~~~~~~~ 502 (502)
...++++|++++++|+++.+++
T Consensus 431 -~~~t~e~i~~~l~~l~~~l~~~ 452 (452)
T 3n5m_A 431 -LVISSEEIAFVIGTLKTAMERI 452 (452)
T ss_dssp -TTCCHHHHHHHHHHHHHHHTTC
T ss_pred -CCCCHHHHHHHHHHHHHHHHhC
Confidence 4467789999999999987653
No 207
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.75 E-value=3.9e-17 Score=166.85 Aligned_cols=234 Identities=9% Similarity=0.027 Sum_probs=157.2
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEE---cCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC-CCchhHH------
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVI---QGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD-QTHCAFQ------ 189 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~---t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~------ 189 (502)
++.+.+++++|.+. .++ ++||++||..++.+... +++.|+++. ..|....
T Consensus 78 ~Le~~lA~l~g~e~---------alv~p~~~sGt~A~~~al~all~-----------pGD~Vl~~~~~~y~~~~~~~g~~ 137 (427)
T 3hvy_A 78 SLDRVYANIFNTES---------AFVRPHFVNGTHAIGAALFGNLR-----------PNDTMMSICGMPYDTLHDIIGMD 137 (427)
T ss_dssp HHHHHHHHHHTCSE---------EEEETTCCSHHHHHHHHHHHTCC-----------TTCEEEECSSSCCGGGHHHHTCC
T ss_pred HHHHHHHHHhCCCc---------eEEeCCCCcHHHHHHHHHHHhcC-----------CCCEEEEeCCCCchhHHHHhccc
Confidence 34466888998764 356 78999999777765433 678888887 6665544
Q ss_pred -----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec----CCccccccCChhHHHHHHH
Q 037144 190 -----KAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV----GTTAITAVDPLKPLCDVAK 260 (502)
Q Consensus 190 -----~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~----gtt~~G~idpl~eI~~i~~ 260 (502)
..++..|+ +++.+|. + ++.+|+++|++++++. .++.+|+++. +++++|.+.|+++|+++|+
T Consensus 138 ~~~~~~~l~~~G~---~~~~v~~-~--~~~~d~e~l~~~i~~~----~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~ 207 (427)
T 3hvy_A 138 DSKKVGSLREYGV---KYKMVDL-K--DGKVDINTVKEELKKD----DSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIR 207 (427)
T ss_dssp TTCCSCCTGGGTC---EEEECCC-B--TTBCCHHHHHHHHHHC----TTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHH
T ss_pred cchhhhHHHHcCC---EEEEecC-C--CCCcCHHHHHHHhhCC----CCCEEEEEECCCCCCCCccccHHHHHHHHHHHH
Confidence 33455788 8888887 3 4689999999999741 1245788888 8999999999999999999
Q ss_pred H--hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC--cceEEEeeCchhhhhhhcC-CcccccCcc
Q 037144 261 Q--FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL--DCCCLWVKDPSCLLSTLST-NPQYLKNEA 335 (502)
Q Consensus 261 ~--~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~--~~g~~~~r~~~~l~~~~~~-~~~yl~~~~ 335 (502)
+ +|++++||+||+.+........ .++|+++.++||+++++. ..|+++. ++......... ....+.
T Consensus 208 ~~~~g~~livD~a~~~~~~~~~p~~------~gaDiv~~S~sK~lgg~g~~~GG~i~~-~~~li~~l~~~~~~~~~g--- 277 (427)
T 3hvy_A 208 EVNENVIVFVDNCYGEFVEEKEPTD------VGADIIAGSLIKNIGGGIATTGGYIAG-KEEYVTQATFRVTVPGIG--- 277 (427)
T ss_dssp HHCSSSEEEEECTTCTTTSSSCGGG------GTCSEEEEETTSGGGTTTCCSCEEEEE-CHHHHHHHHHHHSCTTTG---
T ss_pred HhCCCCEEEEECCccccccCCCCcc------cCCeEEEECCcccccccccceEEEEEE-CHHHHHHHHHHhhcCCcc---
Confidence 9 8999999999987653222111 168999999999998632 2366555 44433222110 111110
Q ss_pred CCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCee-----EE
Q 037144 336 TDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVAFPRNFS-----LV 410 (502)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~~~~~~~-----~v 410 (502)
...+-.+. ..|.+++ |..-...++++..+++.++++.|+++ ++++. |.... ++
T Consensus 278 ----------------~~~~~~~~--~a~~~~~--gl~~~~~r~~~~~~~a~~la~~L~~~-g~~V~-p~~~~~~~~li~ 335 (427)
T 3hvy_A 278 ----------------GECGSTFG--VMRSLYE--GLFMAPHVTIEAVKGAVFCARIMELA-GFDVL-PKYNDKRTDIIQ 335 (427)
T ss_dssp ----------------GGCCCCTT--CHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEE-SCTTSCCSSSEE
T ss_pred ----------------cccCCCHH--HHHHHHH--hHhHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCCCCCCceEEE
Confidence 00110011 1344444 33455678889999999999999998 57774 33333 67
Q ss_pred EEEee
Q 037144 411 CFRVT 415 (502)
Q Consensus 411 ~f~~~ 415 (502)
+|.+.
T Consensus 336 ~~~l~ 340 (427)
T 3hvy_A 336 AIKFN 340 (427)
T ss_dssp EEECS
T ss_pred EEeCC
Confidence 77664
No 208
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.75 E-value=1.4e-16 Score=165.13 Aligned_cols=313 Identities=9% Similarity=-0.062 Sum_probs=183.5
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHHH
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQI 194 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~~ 194 (502)
+...++.++++++++.+.+ .++|++||++||..|+.+++.....+ +.. ++..|+ .....|....-+...
T Consensus 118 ~~~~~L~e~la~~~~~~~~-------~v~~~~sGseA~~~Alk~a~~~~~~~-g~~--g~~~ii~~~~~yhg~~~~~~~~ 187 (457)
T 3tfu_A 118 EPAARLAKLLVDITPAGLD-------TVFFSDSGSVSVEVAAKMALQYWRGR-GLP--GKRRLMTWRGGYHGDTFLAMSI 187 (457)
T ss_dssp HHHHHHHHHHHHHSSTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCT--TCCEEEEETTCCCCSSHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCcC-------EEEEeCcHHHHHHHHHHHHHHHHHhc-CCC--CCceEEEEcCCcCCccHHhhcc
Confidence 3445677888999875443 58999999999999999998753322 111 233444 444445433333222
Q ss_pred cC----------CCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec-CCccccccCC----hhHHHHHH
Q 037144 195 VG----------IDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV-GTTAITAVDP----LKPLCDVA 259 (502)
Q Consensus 195 ~G----------lg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt~~G~idp----l~eI~~i~ 259 (502)
.+ .....+..+|....+....|+++|+++|++.. ..+.+|++.. ..+++|.+-| +++|.++|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~---~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~ 264 (457)
T 3tfu_A 188 CDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHA---GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDIC 264 (457)
T ss_dssp SCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHG---GGEEEEEECSSEECTTTCEECCTHHHHHHHHHH
T ss_pred cCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCC---CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHH
Confidence 11 00113455555432223468999999997532 1245677777 7788898866 99999999
Q ss_pred HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcC-Ccc-cccCccC
Q 037144 260 KQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLST-NPQ-YLKNEAT 336 (502)
Q Consensus 260 ~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~-~~~-yl~~~~~ 336 (502)
++||++|++|++|.++......+.....++ ..|.+++ .|.++.++ ..|+++.++. . .+.+.. .+. +....
T Consensus 265 ~~~gillI~DEv~~g~gr~G~~~a~~~~~~-~pdiit~--sK~l~gG~~~lG~v~~~~~-i-~~~~~~~~~~~~~~~~-- 337 (457)
T 3tfu_A 265 RRYEVLLIFDEIATGFGRTGALFAADHAGV-SPDIMCV--GKALTGGYLSLAATLCTAD-V-AHTISAGAAGALMHGP-- 337 (457)
T ss_dssp HHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEE--CGGGGTTSSCCEEEEEEHH-H-HHHHHHSSSCSCCCCC--
T ss_pred HHcCCEEEEEcCccCCccccchhHhHhcCC-CceEEEE--ChhhhCCCcceEEEEEcHH-H-HHHhhccCCCceeEec--
Confidence 999999999999976532211111111122 5677765 59887763 6888887644 2 223311 011 11100
Q ss_pred CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCeeEEEEE
Q 037144 337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVAFPRNFSLVCFR 413 (502)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~~~~~~~~v~f~ 413 (502)
+-...++.+.+++..+..-.-+++.++..++.+++++.|+++ |++..+ .+...++.+.
T Consensus 338 ------------------t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~G~~~~i~ 398 (457)
T 3tfu_A 338 ------------------TFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDV-RVCGAIGVIE 398 (457)
T ss_dssp ------------------TTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTTEEEE-EECSSCEEEE
T ss_pred ------------------CCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCeeee-ecCCeEEEEE
Confidence 001133444444433321111245667777888888888764 455433 2334566666
Q ss_pred eecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHH
Q 037144 414 VTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWT 493 (502)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~ 493 (502)
+.... + ..++.+.+.++|.++ .+. ..++|++.. ...++++|+++++
T Consensus 399 l~~~~--------------------------~--~~~~~~~l~~~Gv~v-~~~----~~~lRi~p~-~~~t~eei~~~l~ 444 (457)
T 3tfu_A 399 CDRPV--------------------------D--LAVATPAALDRGVWL-RPF----RNLVYAMPP-YICTPAEITQITS 444 (457)
T ss_dssp ESSCC--------------------------C--HHHHHHHHHHTTEEC-CCB----TTEEEECCC-TTCCHHHHHHHHH
T ss_pred ECCcc--------------------------c--HHHHHHHHHHCCeEE-Eec----CCEEEEECC-CCCCHHHHHHHHH
Confidence 54321 0 245677777788643 321 248999864 4467789999999
Q ss_pred HHHHHHHh
Q 037144 494 VVQEHLEA 501 (502)
Q Consensus 494 ~l~~~~~~ 501 (502)
+|+++.++
T Consensus 445 ~L~~~l~~ 452 (457)
T 3tfu_A 445 AMVEVARL 452 (457)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998765
No 209
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.75 E-value=4.6e-16 Score=161.04 Aligned_cols=318 Identities=12% Similarity=0.068 Sum_probs=178.5
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQ 193 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~ 193 (502)
.+...++.++++++++.+.. ...+||+|||+||..|+.+++... ++..|++ ....|....-+..
T Consensus 103 ~~~~~~la~~l~~~~~~~~~------~~v~~~~sGseA~~~Alk~a~~~~---------g~~~ii~~~~~yhG~~~~~~~ 167 (451)
T 3oks_A 103 YEGYVAVCEQLNRLTPVRGD------KRSALFNSGSEAVENAVKIARSHT---------HKPAVVAFDHAYHGRTNLTMA 167 (451)
T ss_dssp CHHHHHHHHHHHHHSSCCSS------EEEEEESSHHHHHHHHHHHHHHHH---------CCCEEEEETTCCCCSSHHHHH
T ss_pred CHHHHHHHHHHHHhCCcCCC------CEEEEeCcHHHHHHHHHHHHHHhc---------CCCeEEEEcCCcCCccHHHHH
Confidence 45566788899999874321 158999999999999999888641 3344444 4444544433333
Q ss_pred HcCCC----------CCCEEEEecCCC--------CC---cccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC-
Q 037144 194 IVGID----------RKNIRAIKTTKS--------SS---YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP- 251 (502)
Q Consensus 194 ~~Glg----------~~~v~~v~~~~~--------~~---~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp- 251 (502)
+.|-. ...++.+|.... +. ..-+++.++++|++.. .+..+.+|++....+..|.+-|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~-~~~~~aavi~ep~~~~gG~~~~~ 246 (451)
T 3oks_A 168 LTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQI-GADNLAAVVIEPIQGEGGFIVPA 246 (451)
T ss_dssp HCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHT-CGGGEEEEEECSSBTTTTCBCCC
T ss_pred hcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhc-CCCCEEEEEEcCCcCCCCccCCC
Confidence 32210 115677776410 00 0123555556665422 1123456666665666677766
Q ss_pred ---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCc
Q 037144 252 ---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNP 328 (502)
Q Consensus 252 ---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~ 328 (502)
+++|.++|++||+++++|.+|.++......+.....++ ..|.+++ .|.++.+...|+++.++. .. +.+...
T Consensus 247 ~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~t~--sK~l~~G~~iG~v~~~~~-~~-~~~~~~- 320 (451)
T 3oks_A 247 DGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGI-DPDLIVT--AKGIAGGLPLSAVTGRAE-IM-DSPHVS- 320 (451)
T ss_dssp TTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEE--CGGGGTTSSCEEEEEEHH-HH-TCSCTT-
T ss_pred HHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCC-CCCeeee--hhhhhCCcceEEEEECHH-HH-hhhcCC-
Confidence 99999999999999999999976533221111111122 4677765 499987778898877532 22 222110
Q ss_pred ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEecC
Q 037144 329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT----SDKRFEVAFP 404 (502)
Q Consensus 329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~----~~~~~~l~~~ 404 (502)
. .. .+-...++...+++..+..-.-.++.++..++.+++++.|+ +.|.+..+ +
T Consensus 321 --~-~~-------------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~ 377 (451)
T 3oks_A 321 --G-LG-------------------GTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGDV-R 377 (451)
T ss_dssp --S-BC-------------------CSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-E
T ss_pred --C-cC-------------------CCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE-E
Confidence 0 00 00011334444444433210012345555566666666554 45555443 2
Q ss_pred CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCc
Q 037144 405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTM 484 (502)
Q Consensus 405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~ 484 (502)
+...++.+.+..... . .. ......++.+.+.++|.++.+... ...++|+++. ...+
T Consensus 378 ~~G~~~~~~~~~~~~-~-----------------~~---~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~~-~~~t 433 (451)
T 3oks_A 378 GRGAMIAMELVKAGT-T-----------------EP---DADLTKALCAGAHAAGVIVLSCGT--YGNVVRFLPP-LSIG 433 (451)
T ss_dssp EETTEEEEEEBSTTS-C-----------------CB---CHHHHHHHHHHHHHTTEECEEECT--TSCEEEECCC-TTCC
T ss_pred EeeEEEEEEEecCcc-C-----------------CC---CHHHHHHHHHHHHhCCcEEecCCC--CCCEEEEECC-CCCC
Confidence 333456665532100 0 00 022345678888888976544322 1257999864 4467
Q ss_pred HHHHHHHHHHHHHHHHh
Q 037144 485 ESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 485 ~~di~~~~~~l~~~~~~ 501 (502)
+++|+++++.|++++++
T Consensus 434 ~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 434 DDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 78999999999988764
No 210
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.75 E-value=3.4e-16 Score=162.44 Aligned_cols=322 Identities=11% Similarity=0.024 Sum_probs=181.1
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQ 193 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~ 193 (502)
.+...++.++++++++.+.+ .++|++||++|+..|+.+++.....+ +.. ++..|++ ....|....-+..
T Consensus 93 ~~~~~~la~~l~~~~~~~~~-------~v~~~~ggseA~~~al~~~~~~~~~~-g~~--~~~~vi~~~~~yhg~~~~~~~ 162 (459)
T 4a6r_A 93 HPAVVELSSLLAEVTPAGFD-------RVFYTNSGSESVDTMIRMVRRYWDVQ-GKP--EKKTLIGRWNGYHGSTIGGAS 162 (459)
T ss_dssp CHHHHHHHHHHHHHSCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCT--TCCEEEEETTCCCCSSHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCchHHHHHHHHHHHHHHHHhc-CCC--CCCEEEEECCCcCCccHHHHh
Confidence 45666788899999876543 58999999999999999998753221 111 2344444 4444543333333
Q ss_pred HcCCC---------CCCEEEEecCC--C-CCcccC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC--
Q 037144 194 IVGID---------RKNIRAIKTTK--S-SSYGLS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP-- 251 (502)
Q Consensus 194 ~~Glg---------~~~v~~v~~~~--~-~~~~~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp-- 251 (502)
..|.. ...+..++... . +++ +| +++|+++|++... ..+.+|++....++.|.+-|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~--~~~~~vi~ep~~~~~G~~~~~~ 239 (459)
T 4a6r_A 163 LGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGA--DKVAAFVGEPIQGAGGVIVPPA 239 (459)
T ss_dssp HSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCG--GGEEEEEECSSBTTTTCBCCCT
T ss_pred hcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCC--CCEEEEEECCccCCCCcccCCH
Confidence 32321 11455566432 0 112 45 7889998875211 12456777777777788877
Q ss_pred --hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCc
Q 037144 252 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNP 328 (502)
Q Consensus 252 --l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~ 328 (502)
+++|.++|++||+++++|.+|.++......+.....++ ..|.++++ |.++.+ ...|+++.++ +.. +.+....
T Consensus 240 ~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~-~pdi~t~s--K~l~gg~~~lg~v~~~~-~i~-~~~~~~~ 314 (459)
T 4a6r_A 240 TYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGF-QPDLFTAA--KGLSSGYLPIGAVFVGK-RVA-EGLIAGG 314 (459)
T ss_dssp THHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEEC--GGGGTTSSCCEEEEECH-HHH-HHHHHHC
T ss_pred HHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeehh--hhhcCCCCCccceeeCH-HHH-HHhhcCC
Confidence 99999999999999999999977533221111111122 46777765 988765 5788887743 332 2222100
Q ss_pred ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHH-HHHHHHHHH----HhcCCCeE
Q 037144 329 QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF---GVANLRNFIRSHV-GMAKLFERL----VTSDKRFE 400 (502)
Q Consensus 329 ~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~-~la~~l~~~----l~~~~~~~ 400 (502)
.+.... +. ...++.+.+++..+ ..+ +++++.. ++.+++++. |.+.|.+.
T Consensus 315 ~~~~~~----------------t~----~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 371 (459)
T 4a6r_A 315 DFNHGF----------------TY----SGHPVCAAVAHANVAALRDE---GIVQRVKDDIGPYMQKRWRETFSRFEHVD 371 (459)
T ss_dssp TTHHHH----------------HH----CSCHHHHHHHHHHHHHHHHT---CHHHHHHHTHHHHHHHHHHHHHTTCTTEE
T ss_pred CcccCC----------------CC----CCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 010000 00 01233333333333 222 3344444 444444444 45556555
Q ss_pred EecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecC
Q 037144 401 VAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGN 480 (502)
Q Consensus 401 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~ 480 (502)
.+ ++...++.|.+....... . ..........++.+.+.++|.++.+. + .++|++..
T Consensus 372 ~~-~~~g~~~~~~~~~~~~~~-----------~------~~~~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~~~- 427 (459)
T 4a6r_A 372 DV-RGVGMVQAFTLVKNKAKR-----------E------LFPDFGEIGTLCRDIFFRNNLIMRAC----G-DHIVSAPP- 427 (459)
T ss_dssp EE-EEETTEEEEEECSBTTTT-----------B------CCSSTTHHHHHHHHHHHHTTEECEEE----T-TEEEECCC-
T ss_pred EE-EEEEEEEEEEEecCcccc-----------c------cccchHHHHHHHHHHHHHCCeEEecC----C-CEEEEECC-
Confidence 44 333445666654321000 0 00000123456778888888754443 2 68999864
Q ss_pred CCCcHHHHHHHHHHHHHHHHh
Q 037144 481 SMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 481 ~~t~~~di~~~~~~l~~~~~~ 501 (502)
...+++++++++++|+++.++
T Consensus 428 ~~~t~e~i~~~l~~l~~~l~~ 448 (459)
T 4a6r_A 428 LVMTRAEVDEMLAVAERCLEE 448 (459)
T ss_dssp TTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 456778999999999887653
No 211
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.74 E-value=6.2e-16 Score=160.90 Aligned_cols=326 Identities=10% Similarity=0.030 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
.+...++.+.++++++.+.+ .++|++||++||..|+.+++.....+ |..+ ++.+|......|....-+...
T Consensus 98 ~~~~~~lae~l~~~~~~~~~-------~v~~~~sGseA~~~aik~a~~~~~~~-g~~~-~~~ii~~~~~yHg~t~~~~~~ 168 (472)
T 3hmu_A 98 HVPAIALAQKLAELAPGDLN-------HVFFAGGGSEANDTNIRMVRTYWQNK-GQPE-KTVIISRKNAYHGSTVASSAL 168 (472)
T ss_dssp CHHHHHHHHHHHHHSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCTT-CCEEEEETTCCCCSSHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCHHHHHHHHHHHHHHHHHhc-CCCC-CCEEEEEcCcCCCccHHhhhc
Confidence 34555677778888865433 58999999999999999998753221 2111 233444454455443333333
Q ss_pred cCC--------CCCCEEEEecCC--C-CCcccC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----
Q 037144 195 VGI--------DRKNIRAIKTTK--S-SSYGLS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---- 251 (502)
Q Consensus 195 ~Gl--------g~~~v~~v~~~~--~-~~~~~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---- 251 (502)
.|. ....+..+|... . .++ +| +++|+++|++... ..+.+|++....++.|.+-|
T Consensus 169 ~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~--~~~aavi~epv~~~gG~~~~~~~~ 245 (472)
T 3hmu_A 169 GGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELGE--NRVAAFIAEPVQGAGGVIVAPDSY 245 (472)
T ss_dssp SCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCG--GGEEEEEECSSBSTTTCBCCCTTH
T ss_pred cCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcCC--CCEEEEEEcCccCCCCcccCCHHH
Confidence 221 111466666432 0 011 34 7889998874211 22457777777778888887
Q ss_pred hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCccc
Q 037144 252 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQY 330 (502)
Q Consensus 252 l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~y 330 (502)
+++|.++|++||++|++|.+|.++......+.....++ ..|.++++ |.++.+ ...|+++.++. . .+.+.. ..+
T Consensus 246 l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v-~pdi~t~s--K~l~gg~~plG~v~~~~~-i-~~~~~~-~~~ 319 (472)
T 3hmu_A 246 WPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGI-RPHIMTIA--KGLSSGYAPIGGSIVCDE-V-AHVIGK-DEF 319 (472)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSSCCEEEEEEHH-H-HHHHTT-SCB
T ss_pred HHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCC-CCceeeec--hhhhcCCcceEEEEECHH-H-HHhccc-CCc
Confidence 99999999999999999999987533221111111233 56888765 998765 46788877543 2 233311 111
Q ss_pred ccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHH-HHHHHHHHHHhcC---CCeEEecCCC
Q 037144 331 LKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHV-GMAKLFERLVTSD---KRFEVAFPRN 406 (502)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~-~la~~l~~~l~~~---~~~~l~~~~~ 406 (502)
.... +-...++.+.+++..+..-.-++++++.. ++.+++++.|+++ |.+..+ .+.
T Consensus 320 ~~~~--------------------t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~ 378 (472)
T 3hmu_A 320 NHGY--------------------TYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTDHPLVGEA-KIV 378 (472)
T ss_dssp CCCC--------------------TTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGGSTTEEEE-EEE
T ss_pred cccC--------------------CCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-Eec
Confidence 1000 00113344444444332111134566666 6777777777554 444443 233
Q ss_pred eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144 407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES 486 (502)
Q Consensus 407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~ 486 (502)
..++.|.+....... ..... ........+.+.+.++|.++.+. + .++|++.. ...+++
T Consensus 379 G~~~~i~~~~~~~~~---------------~~~~~-~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~p~-~~~t~e 436 (472)
T 3hmu_A 379 GMMASIALTPNKASR---------------AKFAS-EPGTIGYICRERCFANNLIMRHV----G-DRMIISPP-LVITPA 436 (472)
T ss_dssp TTEEEEEECSCGGGT---------------CCBSS-CTTHHHHHHHHHHHHTTBCCEEE----T-TEEEECCC-TTCCHH
T ss_pred CceEEEEEecCcccc---------------ccccc-hhHHHHHHHHHHHHHCCcEEEec----C-CEEEEECC-CCCCHH
Confidence 446666664321000 00000 00123456778888889755443 2 68999853 446778
Q ss_pred HHHHHHHHHHHHHHh
Q 037144 487 HVRAAWTVVQEHLEA 501 (502)
Q Consensus 487 di~~~~~~l~~~~~~ 501 (502)
+|++++++|+++.++
T Consensus 437 ~i~~~l~~l~~~l~~ 451 (472)
T 3hmu_A 437 EIDEMFVRIRKSLDE 451 (472)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999987653
No 212
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.74 E-value=1.7e-15 Score=157.88 Aligned_cols=327 Identities=11% Similarity=0.051 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
.+...++.+|++++++.+.+ .++|++||++||..|+.+++.....+ |..+ ++.+|......|....-+...
T Consensus 96 ~~~~~~la~~l~~~~~~~~~-------~v~~~~sGseA~~~Aik~a~~~~~~~-g~~~-~~~vi~~~~~yHg~~~~~~~~ 166 (476)
T 3i5t_A 96 TSPAARLAEKIATLTPGDLN-------RIFFTTGGSTAVDSALRFSEFYNNVL-GRPQ-KKRIIVRYDGYHGSTALTAAC 166 (476)
T ss_dssp CHHHHHHHHHHHTTSSTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCTT-CCEEEEETTCCCCSSHHHHHT
T ss_pred CHHHHHHHHHHHhcCCCCcC-------EEEEeCchHHHHHHHHHHHHHHHHhc-CCCC-CCEEEEEcCCcCcCChhhccc
Confidence 45667788999999865433 58999999999999999998764332 2111 233444455556544444433
Q ss_pred cCCC---------CCCEEEEecCCCCC-cccC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----h
Q 037144 195 VGID---------RKNIRAIKTTKSSS-YGLS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----L 252 (502)
Q Consensus 195 ~Glg---------~~~v~~v~~~~~~~-~~~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l 252 (502)
.|.. ...+..++....-+ +..| +++||++|++.. ...+.+|++....++.|.+-| |
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~ep~~~~~G~~~~~~~~L 244 (476)
T 3i5t_A 167 TGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLG--PDTIAAFLAEPILASGGVIIPPAGYH 244 (476)
T ss_dssp CCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTSBCCCTTHH
T ss_pred cCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCcccCCHHHH
Confidence 3321 12345555432000 1223 789999887521 123457777777778887665 9
Q ss_pred hHHHHHHHHhCCEEEeecccccccccCccchhh-hcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCc--
Q 037144 253 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF-IDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNP-- 328 (502)
Q Consensus 253 ~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~-~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~-- 328 (502)
++|.++|++||++|++|.+|.++......+... ..++ ..|.++++ |.++.+ ...|+++.++ +. .+.+....
T Consensus 245 ~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v-~pdi~t~s--K~l~~G~~plg~v~~~~-~i-~~~~~~~~~~ 319 (476)
T 3i5t_A 245 ARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGV-VPDIITFA--KGVTSGYVPLGGLAISE-AV-LARISGENAK 319 (476)
T ss_dssp HHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCC-CCSEEEEC--GGGGTTSSCCEEEEECH-HH-HHTTSGGGCT
T ss_pred HHHHHHHHHcCCEEEEEecccCCccccCceeeecccCC-Ccchhhhh--hhhcCCCcCeEEEEECH-HH-HHHHhcCCcc
Confidence 999999999999999999998753322211111 1233 46788765 998876 5778887743 32 22332110
Q ss_pred --ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEec
Q 037144 329 --QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVAF 403 (502)
Q Consensus 329 --~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~~ 403 (502)
.+... .+-...++.+.+++..+..-.-+++.++..++.+++++.|+++ |.+..+
T Consensus 320 ~~~~~~~--------------------~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v- 378 (476)
T 3i5t_A 320 GSWFTNG--------------------YTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLRDLPGVAET- 378 (476)
T ss_dssp TCEECCC--------------------CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEE-
T ss_pred ccccccc--------------------CCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-
Confidence 01100 0001133444444443321111356677778888888888764 334333
Q ss_pred CCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCC
Q 037144 404 PRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMT 483 (502)
Q Consensus 404 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t 483 (502)
.+...++.+.+....... ............+.+.+.++|.++.+. | .++|++.. ...
T Consensus 379 ~~~G~~~~i~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~p~-l~~ 435 (476)
T 3i5t_A 379 RSVGLVGCVQCLLDPTRA-----------------DGTAEDKAFTLKIDERCFELGLIVRPL----G-DLCVISPP-LII 435 (476)
T ss_dssp EEETTEEEEEECCC----------------------CCHHHHHHHHHHHHHHHHTTEECEEE----T-TEEEECCC-TTC
T ss_pred EecCceeEEEEecCcccc-----------------ccccchhHHHHHHHHHHHHCCCEEEec----C-CEEEEECC-CCC
Confidence 233345556554321000 000001223567788888888654332 3 68999853 446
Q ss_pred cHHHHHHHHHHHHHHHHh
Q 037144 484 MESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 484 ~~~di~~~~~~l~~~~~~ 501 (502)
++++|++++++|+++.++
T Consensus 436 t~e~i~~~l~~l~~~l~~ 453 (476)
T 3i5t_A 436 SRAQIDEMVAIMRQAITE 453 (476)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 788999999999987653
No 213
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.74 E-value=7.1e-16 Score=160.07 Aligned_cols=329 Identities=12% Similarity=0.022 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-CCCCchhHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYS-SDQTHCAFQKAAQ 193 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~aa~ 193 (502)
.+...++.++++++++.+.+ ..+||+||++||..|+.+++.....+ |.. ++..|++ ....|....-+..
T Consensus 94 ~~~~~~la~~l~~~~~~~~~-------~v~~~~gGseA~~~al~~~~~~~~~~-g~~--~~~~vi~~~~~yhg~~~~~~~ 163 (460)
T 3gju_A 94 TEASITLAKMIIDRAPKGMS-------RVYFGLSGSDANETNIKLIWYYNNVL-GRP--EKKKIISRWRGYHGSGVMTGS 163 (460)
T ss_dssp CHHHHHHHHHHHHHSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCT--TCCEEEEETTCCCCSSHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCcC-------EEEEeCchHHHHHHHHHHHHHHHHhc-CCC--CCCEEEEECCCcCCCCHHHhh
Confidence 34566778888888765443 58999999999999999998643221 111 3344444 4444544444444
Q ss_pred HcCC---------CCCCEEEEecCCC---CCcccC--------HHHHHHHHHHHHhcCCccEEEEEecCCccccccCC--
Q 037144 194 IVGI---------DRKNIRAIKTTKS---SSYGLS--------AESVLSQINLDVEAELIPLFLCATVGTTAITAVDP-- 251 (502)
Q Consensus 194 ~~Gl---------g~~~v~~v~~~~~---~~~~~d--------~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp-- 251 (502)
..|. ....++.+|.... ++..++ +++|+++|++.. ...+.+|++....+++|.+-|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~--~~~~aaii~ep~~~~~G~~~~~~ 241 (460)
T 3gju_A 164 LTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEG--PETIAAFIGEPILGTGGIVPPPA 241 (460)
T ss_dssp HCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCT
T ss_pred ccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCCccCCH
Confidence 3222 1124667764320 011233 688999887421 123457777777777888766
Q ss_pred --hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCC-
Q 037144 252 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTN- 327 (502)
Q Consensus 252 --l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~- 327 (502)
+++|.++|++||++|++|.+|.++......+.....++ ..|.++++ |.++.+ ...|+++.++. . .+.+...
T Consensus 242 ~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~pdi~t~s--K~l~gG~~~lg~v~~~~~-i-~~~~~~~~ 316 (460)
T 3gju_A 242 GYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGI-KPDLITIA--KGLTSAYAPLSGVIVADR-V-WQVLVQGS 316 (460)
T ss_dssp THHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSSCCEEEEEEHH-H-HHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeeee--hhhcCCCCCeEEEEECHH-H-HHHHhccc
Confidence 99999999999999999999986533221111111122 46777765 998776 47888877543 2 2222110
Q ss_pred --cccccCccCCCCCcccccCCCcccccCCCCCCchHHHH---HHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 328 --PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWV---VIRNFGVAN-LRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 328 --~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g-~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
...+.... +-...++.+.+ +++.+..+. ++...+....+.+.|.+.+.+.|.+..
T Consensus 317 ~~~~~~~~~~-------------------t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 377 (460)
T 3gju_A 317 DKLGSLGHGW-------------------TYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGE 377 (460)
T ss_dssp HHHCSCSCCC-------------------TTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred ccccccccCC-------------------CCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 00010000 00112333333 343332222 233333333444455555566666554
Q ss_pred ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCC
Q 037144 402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNS 481 (502)
Q Consensus 402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~ 481 (502)
+ .+...++.+.+....... . ... .......++.+.+.++|.++.+.. +..++|++.. .
T Consensus 378 ~-~~~g~~~~~~~~~~~~~~-----------~----~~~--~~~~~~~~~~~~l~~~Gv~v~~~~---~~~~iRi~~~-~ 435 (460)
T 3gju_A 378 V-RGDGMLAAVEFVADKDDR-----------V----FFD--ASQKIGPQVATALAASGVIGRAMP---QGDILGFAPP-L 435 (460)
T ss_dssp E-EEETTEEEEEECSBTTTT-----------B----CCC--GGGCHHHHHHHHHHHTTEECEECS---SSCEEEECCC-T
T ss_pred E-eeeeEEEEEEEccCcccc-----------c----ccc--chHHHHHHHHHHHHHCCeEEecCC---CCCEEEEECC-C
Confidence 4 333445666554321000 0 000 001234567788888897544332 3468999864 4
Q ss_pred CCcHHHHHHHHHHHHHHHHh
Q 037144 482 MTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 482 ~t~~~di~~~~~~l~~~~~~ 501 (502)
..++++|++++++|+++.++
T Consensus 436 ~~t~e~i~~~l~~l~~~l~~ 455 (460)
T 3gju_A 436 CLTREQADIVVSKTADAVKS 455 (460)
T ss_dssp TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 46778999999999987654
No 214
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.74 E-value=1.4e-16 Score=163.82 Aligned_cols=312 Identities=13% Similarity=0.039 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCC-eEEEeCCCCchhHHHHHHHc
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISK-LVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~aa~~~ 195 (502)
...++.+.++++++ ..+ ..+|++|||+|+..|+.+++... ++ .+|..+...|.....+....
T Consensus 94 ~~~~l~~~la~~~~-~~~-------~v~~~~~Gsea~~~ai~~a~~~~---------~~~~vi~~~~~yhg~~~~~~~~~ 156 (429)
T 3k28_A 94 IENKLAKLVIERVP-SIE-------IVRMVNSGTEATMSALRLARGYT---------GRNKILKFIGCYHGHGDSLLIKA 156 (429)
T ss_dssp HHHHHHHHHHHHST-TCS-------EEEEESSHHHHHHHHHHHHHHHH---------TCCEEEEEETCCCCSCGGGCSSC
T ss_pred HHHHHHHHHHHhCC-CCC-------EEEEeCChHHHHHHHHHHHHHhh---------CCCEEEEECCCcCCCcHHHHHhc
Confidence 33445566777775 222 58999999999999999887631 33 34444444554433333223
Q ss_pred CCCCCCEEEEecCCCCCcc------------cCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHH
Q 037144 196 GIDRKNIRAIKTTKSSSYG------------LSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVA 259 (502)
Q Consensus 196 Glg~~~v~~v~~~~~~~~~------------~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~ 259 (502)
|. .+..++........ -|+++|++++++... .+.+|++....+++|.+.| +++|.++|
T Consensus 157 g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~ 230 (429)
T 3k28_A 157 GS---GVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGD---DIACVIVEPVAGNMGVVPPQPGFLEGLREVT 230 (429)
T ss_dssp CT---TC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCCTTHHHHHHHHH
T ss_pred CC---cccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCC---CEEEEEEcCCCCCCCcccCCHHHHHHHHHHH
Confidence 32 22222111100000 189999999975321 2456777777777888888 99999999
Q ss_pred HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCC
Q 037144 260 KQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQE 339 (502)
Q Consensus 260 ~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~ 339 (502)
++||+++|+|++|.++ ...........++ ..|.+++ .|.++++...|+++.++ +.. +.+.........
T Consensus 231 ~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~--sK~~~~G~~iG~~~~~~-~~~-~~~~~~~~~~~~------ 298 (429)
T 3k28_A 231 EQNGALLIFDEVMTGF-RVAYNCGQGYYGV-TPDLTCL--GKVIGGGLPVGAYGGKA-EIM-RQVAPSGPIYQA------ 298 (429)
T ss_dssp HHHTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECH-HHH-TTBTTTSSBCCC------
T ss_pred HHcCCEEEEecccccc-ccCcchHHHHhCC-CCceehh--hhhhcCCCCeEEEEEcH-HHH-hhhccCCCcccc------
Confidence 9999999999999765 3221111111122 4577665 59998777888887753 332 222211111000
Q ss_pred CcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeEEEEEee
Q 037144 340 PKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KRFEVAFPRNFSLVCFRVT 415 (502)
Q Consensus 340 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~~~l~~~~~~~~v~f~~~ 415 (502)
.+-....+.+.+++..+.... ++++++..++++++++.|+++ +.+..+ ++..+++.|.+.
T Consensus 299 --------------~t~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~ 362 (429)
T 3k28_A 299 --------------GTLSGNPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLRKAAEKHGIPHHI-NRAGSMIGIFFT 362 (429)
T ss_dssp --------------CTTTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEE-EEETTEEEEESS
T ss_pred --------------CCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEE-EeeccEEEEEEe
Confidence 001113344444444332111 567777778888888777653 332222 223345566553
Q ss_pred cCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHH
Q 037144 416 PSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVV 495 (502)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l 495 (502)
....... .. . .........++.+.+.++|.++ .+. +...+|+++ ..+++++++++++|
T Consensus 363 ~~~~~~~----------~~---~--~~~~~~~~~~~~~~l~~~Gv~v-~~~---~~~~~r~~~---~~t~e~i~~~l~~l 420 (429)
T 3k28_A 363 DEPVINY----------DA---A--KSSNLQFFAAYYREMVEQGVFL-PPS---QFEGLFLST---VHSDADIEATIAAA 420 (429)
T ss_dssp SSCCCSH----------HH---H--TTSCHHHHHHHHHHHHHTTEEC-CSS---TTSCBCCCT---TCCHHHHHHHHHHH
T ss_pred cCCcccc----------cc---c--ccccHHHHHHHHHHHHHCCeEE-ecC---CCCCEEEEC---CCCHHHHHHHHHHH
Confidence 2210000 00 0 0000223456778888888643 332 234577753 46788999999999
Q ss_pred HHHHHh
Q 037144 496 QEHLEA 501 (502)
Q Consensus 496 ~~~~~~ 501 (502)
+++.++
T Consensus 421 ~~~l~~ 426 (429)
T 3k28_A 421 EIAMSK 426 (429)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 998765
No 215
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.74 E-value=1.9e-15 Score=156.33 Aligned_cols=324 Identities=10% Similarity=0.014 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC-chhHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT-HCAFQKAAQ 193 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~-H~s~~~aa~ 193 (502)
.+...++.++++++++...+ .++||+|||+|+..|+.+++...... |.. .++.|++.+.+ |.+...+..
T Consensus 86 ~~~~~~la~~l~~~~~~~~~-------~v~~~~sGseA~~~al~~~~~~~~~~-G~~--~~~~vi~~~~~yhg~~~~~~~ 155 (448)
T 3dod_A 86 NVPATQLAETLIDISPKKLT-------RVFYSDSGAEAMEIALKMAFQYWKNI-GKP--EKQKFIAMKNGYHGDTIGAVS 155 (448)
T ss_dssp EHHHHHHHHHHHHHSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCT--TCCEEEEEC------------
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCchHHHHHHHHHHHHHHHHhh-CCC--CCCEEEEECCCCCCccHHHHH
Confidence 44566788899999865433 58999999999999999998753221 100 14555555555 433333333
Q ss_pred HcCCC---------CCCEEEEecCCCCCccc-----------CHHHHHHHHHHHHhcCCccEEEEEecCC-ccccccCC-
Q 037144 194 IVGID---------RKNIRAIKTTKSSSYGL-----------SAESVLSQINLDVEAELIPLFLCATVGT-TAITAVDP- 251 (502)
Q Consensus 194 ~~Glg---------~~~v~~v~~~~~~~~~~-----------d~~~Le~~i~~~~~~g~~p~~Vv~t~gt-t~~G~idp- 251 (502)
..|.. ...+..+|.+. .++. |+++||++|+... ..+.+|++.... ++.|.+-|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~a~vi~ep~~~~~~G~~~~~ 230 (448)
T 3dod_A 156 VGSIELFHHVYGPLMFESYKAPIPY--VYRSESGDPDECRDQCLRELAQLLEEHH---EEIAALSIESMVQGASGMIVMP 230 (448)
T ss_dssp -----------------CEEECCCC--CTTSSSCCHHHHHHHHHHHHHHHHHHHG---GGEEEEEEESSEESTTTCEECC
T ss_pred hcCCccccccccCCCCCceEeCCCc--cccCCccchhhhhHHHHHHHHHHHHhCC---CCEEEEEEeCcccCCCCeecCC
Confidence 22210 01345555532 2232 5899999997321 124466666665 77887755
Q ss_pred ---hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCC-cceEEEeeCchhhhhhhcCC
Q 037144 252 ---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTL-DCCCLWVKDPSCLLSTLSTN 327 (502)
Q Consensus 252 ---l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~-~~g~~~~r~~~~l~~~~~~~ 327 (502)
+++|.++|++||++|++|.+|.++......+.....++ ..|.++++ |.++.++ ..|+++.++. . .+.+...
T Consensus 231 ~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~-~~di~t~s--K~l~~G~~~ig~v~~~~~-~-~~~~~~~ 305 (448)
T 3dod_A 231 EGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENV-QPDLMAAG--KGITGGYLPIAVTFATED-I-YKAFYDD 305 (448)
T ss_dssp TTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSSCCEEEEEEHH-H-HHTTCSC
T ss_pred HHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCC-CCCEEEec--ccccCCcCceEEEEECHH-H-HHHhhhc
Confidence 99999999999999999999986533221111111122 46777654 9998764 7888877543 2 2233220
Q ss_pred ---cccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh---cCCCeEE
Q 037144 328 ---PQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT---SDKRFEV 401 (502)
Q Consensus 328 ---~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~---~~~~~~l 401 (502)
...+... .+-...++.+.+++..+..-.-+++.++..++.+++++.|+ ..|.+..
T Consensus 306 ~~~~~~~~~~-------------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ 366 (448)
T 3dod_A 306 YENLKTFFHG-------------------HSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGD 366 (448)
T ss_dssp GGGCCCCCCC-------------------CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred cccCCccccc-------------------CCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 0000000 00111333333333333110012345555556666665554 4444433
Q ss_pred ecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCC
Q 037144 402 AFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNS 481 (502)
Q Consensus 402 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~ 481 (502)
+ .+...++.+.+....... . ..... .....++.+.+.++|.++ .+. + .++|++.. .
T Consensus 367 ~-~~~g~~~~~~~~~~~~~~-----------~----~~~~~--~~~~~~~~~~l~~~Gv~~-~~~---~-~~iRi~~~-~ 422 (448)
T 3dod_A 367 I-RQLGFMCGAELVRSKETK-----------E----PYPAD--RRIGYKVSLKMRELGMLT-RPL---G-DVIAFLPP-L 422 (448)
T ss_dssp E-EEETTEEEEEECSBTTTT-----------B----CCCGG--GCHHHHHHHHHHHTTEEC-CEE---T-TEEEECCC-T
T ss_pred E-EeeeEEEEEEEccCcccc-----------c----ccchh--hHHHHHHHHHHHHCCcEE-ecc---C-CEEEEECC-C
Confidence 2 223345556554321000 0 00000 011346777777888654 332 2 68999864 4
Q ss_pred CCcHHHHHHHHHHHHHHHHh
Q 037144 482 MTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 482 ~t~~~di~~~~~~l~~~~~~ 501 (502)
..++++|++++++|+++.++
T Consensus 423 ~~t~e~i~~~l~~l~~~l~~ 442 (448)
T 3dod_A 423 ASTAEELSEMVAIMKQAIHE 442 (448)
T ss_dssp TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 56778999999999988754
No 216
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.73 E-value=2.1e-17 Score=169.57 Aligned_cols=225 Identities=10% Similarity=-0.001 Sum_probs=153.0
Q ss_pred HHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC-CCchhHHHHHHH--
Q 037144 118 ENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD-QTHCAFQKAAQI-- 194 (502)
Q Consensus 118 e~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~~aa~~-- 194 (502)
..++.+++++++|.+... .-++++|||+|+..++.+... +++.|+++. ..|.++...+.+
T Consensus 67 ~~~l~~~la~~~g~~~~~------~~i~~~sGt~Ai~~al~al~~-----------~Gd~Vl~~~~~~y~~~~~~~~l~g 129 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAGL------VRPQIISGTHAISTALFGILR-----------PGDELLYITGKPYDTLEEIVGVRG 129 (431)
T ss_dssp HHHHHHHHHHHTTCSEEC------CBTTSCSHHHHHHHHHHTTCC-----------TTCEEEECSSSCCTTHHHHTTSSS
T ss_pred HHHHHHHHHHHhCCCccc------ccceeeCHHHHHHHHHHHhCC-----------CCCEEEEeCCCCchhHHHHHhhcc
Confidence 566778899999987542 112245789999877765432 567788887 788888866543
Q ss_pred --------cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEec----CCccccccCChhHHHHHHHH-
Q 037144 195 --------VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATV----GTTAITAVDPLKPLCDVAKQ- 261 (502)
Q Consensus 195 --------~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~----gtt~~G~idpl~eI~~i~~~- 261 (502)
.|+ +++.+|.++ +|.+|+++|+++|+++ +.+|+++. +++.+|.++|+++|+++|++
T Consensus 130 ~~~~~~~~~G~---~~~~v~~~~--~~~~d~e~l~~~l~~~------tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~ 198 (431)
T 3ht4_A 130 KGVGSFKEYNI---GYNAVPLTE--GGLVDFEAVAAAIHSN------TKMIGIQRSKGYATRPSFTISQIKEMIAFVKEI 198 (431)
T ss_dssp CSSSCSGGGTC---EEEECCBCT--TSSBCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHH
T ss_pred cccchHHHcCC---EEEEeCCCC--CCCcCHHHHHhhcCCC------CeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhh
Confidence 677 899999875 4799999999999654 34777776 78888889999999999999
Q ss_pred -hCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCC---CCcceEEEeeCchhhhhhhcC-CcccccCccC
Q 037144 262 -FGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFT---TLDCCCLWVKDPSCLLSTLST-NPQYLKNEAT 336 (502)
Q Consensus 262 -~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~---p~~~g~~~~r~~~~l~~~~~~-~~~yl~~~~~ 336 (502)
+|++++||++|+.+....... .. ++|.++.++||++++ |.| |+++.+ +......... ....+..
T Consensus 199 ~~~~~livDea~~~~~~~~~~~-~~-----g~Di~~~S~sK~lgg~~~~~G-G~v~~~-~~li~~l~~~~~~~~~g~--- 267 (431)
T 3ht4_A 199 KPDVVVFVDNCYGEFIEEQEPC-HV-----GADLMAGSLIKNPGGGIVKTG-GYIVGK-EQYVEACAYRLTSPGIGA--- 267 (431)
T ss_dssp CTTCEEEEECTTCTTSSSCCGG-GT-----TCSEEEEETTSGGGTTTCSSC-EEEEEC-HHHHHHHHHHHSCTTTTT---
T ss_pred CCCCEEEEeCCChhhccCCCcc-cc-----CCeEEEcCccccCCCCCCCce-EEEEec-HHHHHHHHHHhccCCccc---
Confidence 999999999998876432211 11 689999999999765 444 666654 4332221110 0001100
Q ss_pred CCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 037144 337 DQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDKRFEVA 402 (502)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~~~~l~ 402 (502)
..+-.+.. .|.+++ +.+.+..++++..++++++.+.|+++ ++++.
T Consensus 268 ----------------~~~~~~~~--~~~~~~--~l~~~~~~~~~~~~~a~~l~~~L~~~-g~~v~ 312 (431)
T 3ht4_A 268 ----------------EAGASLYS--LQEMYQ--GFFLAPHVAGQALKGAIFTAAFLEKL-GMNTS 312 (431)
T ss_dssp ----------------SCSCCCSC--SHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH-TCCEE
T ss_pred ----------------ccCccHHH--HHHHHh--HhhhHHHHHHHHHHHHHHHHHHHHhC-cCEec
Confidence 00111111 122333 33455778889999999999999988 57764
No 217
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.73 E-value=1.1e-15 Score=158.32 Aligned_cols=318 Identities=10% Similarity=0.053 Sum_probs=173.8
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQ 193 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~ 193 (502)
.+...++.++++++++.+.. ...+||+|||+||..|+..++... ++..|+ .....|....-+..
T Consensus 106 ~~~~~~la~~l~~~~~~~~~------~~v~~~~sGseA~~~alk~a~~~~---------g~~~ii~~~~~yhg~~~~~~~ 170 (453)
T 4ffc_A 106 YEQYVQVAELLNALTPGDHD------KRTALFNSGAEAVENAIKVARLAT---------GRPAVVAFDNAYHGRTNLTMA 170 (453)
T ss_dssp CHHHHHHHHHHHHHSSCSSC------EEEEEESSHHHHHHHHHHHHHHHH---------CCCEEEEETTCCCCSSHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCCC------cEEEEeCcHHHHHHHHHHHHHHhc---------CCCEEEEEcCccCCcchHHHh
Confidence 45666788999999875321 158999999999999999887531 334444 44445544444444
Q ss_pred HcCCC----------CCCEEEEecCCC--CCcccC-HHHHHHH---HHHHHhcCCccEEEEEecCCccccccCC----hh
Q 037144 194 IVGID----------RKNIRAIKTTKS--SSYGLS-AESVLSQ---INLDVEAELIPLFLCATVGTTAITAVDP----LK 253 (502)
Q Consensus 194 ~~Glg----------~~~v~~v~~~~~--~~~~~d-~~~Le~~---i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~ 253 (502)
+.|-. ...+..+|.... +.+.++ .+.++.. |++.. ....+.+|++....+..|.+-| ++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i-~~~~~aavi~ep~~~~gG~~~~~~~~l~ 249 (453)
T 4ffc_A 171 LTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQI-GAQSLAAIIIEPIQGEGGFIVPAPGFLA 249 (453)
T ss_dssp HCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHT-CGGGEEEEEECSSBTTTTSBCCCTTHHH
T ss_pred hcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhc-CCCCEEEEEEcCCCCCCCcccCCHHHHH
Confidence 33321 114667776420 111223 2333322 22211 1122445666555555667755 99
Q ss_pred HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccC
Q 037144 254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKN 333 (502)
Q Consensus 254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~ 333 (502)
+|.++|++||++|++|.+|.++......+.....++ ..|.++++ |.++.+...|+++.++. .. +.+... . .
T Consensus 250 ~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~-~pdi~t~s--K~~~~G~~~G~~~~~~~-i~-~~~~~~---~-~ 320 (453)
T 4ffc_A 250 TLTAWASENGVVFIADEVQTGFARTGAWFASEHEGI-VPDIVTMA--KGIAGGMPLSAVTGRAE-LM-DAVYAG---G-L 320 (453)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGGGTTSSCEEEEEEHH-HH-TTSCTT---S-S
T ss_pred HHHHHHHHcCCEEEEecCccCCCcccccchhhhcCC-CcchHhhh--hhhcCCcCeEEEEECHH-HH-hhhccc---C-c
Confidence 999999999999999999976533221111111122 45777654 99977778898877533 22 222110 0 0
Q ss_pred ccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEecCCCeeE
Q 037144 334 EATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVT----SDKRFEVAFPRNFSL 409 (502)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~----~~~~~~l~~~~~~~~ 409 (502)
.. + -...++...+++..+..-.-.++.++..++.+++++.|+ +.|.+..+ +....+
T Consensus 321 ~~---------------t----~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~ 380 (453)
T 4ffc_A 321 GG---------------T----YGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEV-RGRGAM 380 (453)
T ss_dssp CC---------------S----SSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEE-EEETTE
T ss_pred CC---------------C----CCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE-EeeceE
Confidence 00 0 011334444444333211112344555555555555554 45655443 233345
Q ss_pred EEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHH
Q 037144 410 VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVR 489 (502)
Q Consensus 410 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~ 489 (502)
+.+.+..... . .. ......++.+.+.++|.++.+... ...++|+++. ...++++|+
T Consensus 381 ~~~~~~~~~~-~-----------------~~---~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~iRi~~~-~~~t~e~i~ 436 (453)
T 4ffc_A 381 LAIEIVKPGT-L-----------------EP---DAALTKSIAAEALSQGVLILTCGT--FGNVIRLLPP-LVIGDDLLD 436 (453)
T ss_dssp EEEEEBCTTS-C-----------------CB---CHHHHHHHHHHHHHTTEECCEECT--TSCEEEECCC-TTCCHHHHH
T ss_pred EEEEEecCcc-c-----------------CC---CHHHHHHHHHHHHhCCCEEecCCC--CCCEEEEECC-CCCCHHHHH
Confidence 5665532100 0 00 023355777888888975444322 1358999874 446777999
Q ss_pred HHHHHHHHHHHh
Q 037144 490 AAWTVVQEHLEA 501 (502)
Q Consensus 490 ~~~~~l~~~~~~ 501 (502)
+++++|+++.++
T Consensus 437 ~~l~~l~~~l~~ 448 (453)
T 4ffc_A 437 EGITALSDIIRA 448 (453)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988764
No 218
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.73 E-value=2.2e-16 Score=162.55 Aligned_cols=305 Identities=10% Similarity=0.033 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCC-chhHHHHHHHc
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQT-HCAFQKAAQIV 195 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~-H~s~~~aa~~~ 195 (502)
...++.+++++.++ +.+ ..+|++|||+|+..|+.+++... ++..|++.+.+ |.....+....
T Consensus 96 ~~~~l~~~la~~~~-~~~-------~v~~~~sGsea~~~ai~~a~~~~---------~~~~vi~~~~~yhg~~~~~~~~~ 158 (434)
T 3l44_A 96 LEVKFAKMLKEAMP-ALD-------KVRFVNSGTEAVMTTIRVARAYT---------GRTKIMKFAGCYHGHSDLVLVAA 158 (434)
T ss_dssp HHHHHHHHHHHHCT-TCS-------EEEEESSHHHHHHHHHHHHHHHH---------CCCEEEEETTCCCCSSGGGGBC-
T ss_pred HHHHHHHHHHHhCC-CCC-------EEEEeCchHHHHHHHHHHHHHhh---------CCCEEEEEcCccCCCcHHHHhhc
Confidence 34456677888876 222 58999999999999999887631 34455554444 43332222222
Q ss_pred CCCC----------------CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHH
Q 037144 196 GIDR----------------KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPL 255 (502)
Q Consensus 196 Glg~----------------~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI 255 (502)
|.+. ..+..+|. -|+++|++++++... .+.+|+++...+++|.+.| +++|
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~~l~~l 228 (434)
T 3l44_A 159 GSGPSTLGTPDSAGVPQSIAQEVITVPF-------NNVETLKEALDKWGH---EVAAILVEPIVGNFGIVEPKPGFLEKV 228 (434)
T ss_dssp ------CCCBSSTTCCHHHHTTEEEECT-------TCHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCCTTHHHHH
T ss_pred CCcccccCCCCcCCCCCcCCCceEecCc-------ccHHHHHHHHHhCCC---CEEEEEEcCCCCCCCCccCCHHHHHHH
Confidence 2210 02233332 189999999975321 2356777777777888887 9999
Q ss_pred HHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCc-ccccCc
Q 037144 256 CDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNP-QYLKNE 334 (502)
Q Consensus 256 ~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~-~yl~~~ 334 (502)
.++|++||++||+|++|.++ ...........++ ..|.++++ |.++++...|+++.+ ++.. +.+.... .+...
T Consensus 229 ~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~iG~~~~~-~~i~-~~~~~~~~~~~~~- 301 (434)
T 3l44_A 229 NELVHEAGALVIYDEVITAF-RFMYGGAQDLLGV-TPDLTALG--KVIGGGLPIGAYGGK-KEIM-EQVAPLGPAYQAG- 301 (434)
T ss_dssp HHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTC-CCSEEEEE--GGGGTTSSCEEEEEC-HHHH-TTBTTTSSBCCCC-
T ss_pred HHHHHHcCCEEEEeccccce-eccccHHHHHcCC-CCCeeehh--hhhcCCcCeeeEEEc-HHHH-HhhccCCCcccCC-
Confidence 99999999999999999876 3221111111122 46766654 998887889988664 3332 2221110 01100
Q ss_pred cCCCCCcccccCCCcccccCCCCCCchHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCe
Q 037144 335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLWV---VIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNF 407 (502)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~ 407 (502)
+-....+.+.+ +++.+.. ++++++..++.+++++.|++ .+.+..+ ++..
T Consensus 302 --------------------t~~~~~~a~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g 357 (434)
T 3l44_A 302 --------------------TMAGNPASMASGIACLEVLQQ---EGLYEKLDELGATLEKGILEQAAKHNIDITL-NRLK 357 (434)
T ss_dssp --------------------TTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE-EEET
T ss_pred --------------------CCCcCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEE-Eeec
Confidence 00113333333 3333322 34556666677777776655 3332222 2334
Q ss_pred eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144 408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH 487 (502)
Q Consensus 408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d 487 (502)
+++.+.+.......... ..........++.+.+.++|.++ .+. +...+|++. ..++++
T Consensus 358 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~l~~~Gv~v-~~~---~~~~~rl~~---~~t~e~ 415 (434)
T 3l44_A 358 GALTVYFTTNTIEDYDA---------------AQDTDGEMFGKFFKLMLQEGVNL-APS---KYEAWFLTT---EHTKED 415 (434)
T ss_dssp TEEEEEESSSCCCSHHH---------------HHHSCHHHHHHHHHHHHHTTEEC-CSS---TTCCEECCT---TCCHHH
T ss_pred cEEEEEEecCcccchhh---------------ccccCHHHHHHHHHHHHHCCeEE-eec---CCCcEEEec---ccCHHH
Confidence 56666653321100000 00000223456778888888643 322 224577753 467889
Q ss_pred HHHHHHHHHHHHHh
Q 037144 488 VRAAWTVVQEHLEA 501 (502)
Q Consensus 488 i~~~~~~l~~~~~~ 501 (502)
+++++++|+++.++
T Consensus 416 i~~~l~~l~~~l~~ 429 (434)
T 3l44_A 416 IEYTIEAVGRAFAA 429 (434)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988754
No 219
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.73 E-value=3.5e-16 Score=161.87 Aligned_cols=314 Identities=10% Similarity=0.008 Sum_probs=177.3
Q ss_pred HHHHHHHHHHHhcC-CCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH---hCccCCCCeEEEeCCCC-chhHHHH
Q 037144 117 LENIVMDWLGQMLD-LPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK---IGRENISKLVVYSSDQT-HCAFQKA 191 (502)
Q Consensus 117 le~~~~~~l~~l~g-~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~---~~~~~~~~~~v~~s~~~-H~s~~~a 191 (502)
...++.+.++++++ .+.+ ..+|++|||+||..|+.+++.....+ .+..+.+++.|++.+.+ |....-+
T Consensus 102 ~~~~la~~la~~~~~~~~~-------~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~ 174 (449)
T 2cjg_A 102 AMARFVETFARVLGDPALP-------HLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYT 174 (449)
T ss_dssp HHHHHHHHHHHHHCCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTG
T ss_pred HHHHHHHHHHHhcCCCCCC-------EEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccch
Confidence 34456667777776 2222 68999999999999999887432211 01111125556665544 4322211
Q ss_pred HHH--------cCCC--CCCEEEEecCC--CCC------cccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC--
Q 037144 192 AQI--------VGID--RKNIRAIKTTK--SSS------YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP-- 251 (502)
Q Consensus 192 a~~--------~Glg--~~~v~~v~~~~--~~~------~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp-- 251 (502)
... .|.+ ...++.+|.+. ... ...++++|+++|++. +..+.+|+++...+++|.+-+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~---~~~~~~vi~ep~~~~~G~~~~~~ 251 (449)
T 2cjg_A 175 LSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETR---PHDIACFVAEPIQGEGGDRHFRP 251 (449)
T ss_dssp GGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHS---TTTEEEEEECSEETTTTCEECCH
T ss_pred hhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhc---CCceEEEEEeCcCCCCCCccCCH
Confidence 111 1221 12566777653 110 135677799888642 122456777766678898766
Q ss_pred --hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcc
Q 037144 252 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQ 329 (502)
Q Consensus 252 --l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~ 329 (502)
+++|.++|++||+++++|++|.++......+.....++ ..|.++++ |++ | .|++++++ +.. +.+. +.
T Consensus 252 ~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~-~~di~t~s--K~l--~--iG~~~~~~-~~~-~~l~--~~ 320 (449)
T 2cjg_A 252 EFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDV-APDIVAFG--KKT--Q--VCGVMAGR-RVD-EVAD--NV 320 (449)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGG--S--SEEEEECG-GGG-GSTT--CT
T ss_pred HHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCC-CceEEEec--Ccc--c--EEEEEECH-HHh-hhhh--hc
Confidence 99999999999999999999986433211111111122 46777654 988 4 78887764 322 2110 00
Q ss_pred cccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEecC
Q 037144 330 YLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKR-FEVAFP 404 (502)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~-~~l~~~ 404 (502)
++..... ..++ ++......++.++++.+.. .++.++..++++++++.|++ .|. +..+ +
T Consensus 321 ~~~~~~~------------~~t~-~~n~~~~~aa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~ 383 (449)
T 2cjg_A 321 FAVPSRL------------NSTW-GGNLTDMVRARRILEVIEA---EGLFERAVQHGKYLRARLDELAADFPAVVLDP-R 383 (449)
T ss_dssp TTSTTSS------------CCSS-SSCHHHHHHHHHHHHHHHH---HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEE-E
T ss_pred ccCCccc------------ccCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-e
Confidence 1100000 0000 1111112233334443322 34567778888888888875 454 5443 2
Q ss_pred CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCc
Q 037144 405 RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTM 484 (502)
Q Consensus 405 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~ 484 (502)
+..+++.|.+.. .....++.++|.++|.++... +..++|+++. ..++
T Consensus 384 ~~g~~~~~~~~~----------------------------~~~~~~~~~~l~~~Gv~v~~~----g~~~iRi~~~-~~~t 430 (449)
T 2cjg_A 384 GRGLMCAFSLPT----------------------------TADRDELIRQLWQRAVIVLPA----GADTVRFRPP-LTVS 430 (449)
T ss_dssp EETTEEEEECSS----------------------------HHHHHHHHHHHHHTTEECEEE----TTTEEEECCC-TTCC
T ss_pred eccEEEEEEECC----------------------------hHHHHHHHHHHHHCCeEEecC----CCCEEEEECC-CCCC
Confidence 344566665532 111346777777778654332 3468999864 5567
Q ss_pred HHHHHHHHHHHHHHHHh
Q 037144 485 ESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 485 ~~di~~~~~~l~~~~~~ 501 (502)
+++|+++++.|+++.++
T Consensus 431 ~e~i~~~l~~l~~~l~~ 447 (449)
T 2cjg_A 431 TAEIDAAIAAVRSALPV 447 (449)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88999999999988764
No 220
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.71 E-value=7.4e-16 Score=158.27 Aligned_cols=311 Identities=11% Similarity=-0.012 Sum_probs=172.8
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
.....++.+++++.++ +.+ ..++++||++|+..++..++... + ++.+|+.....|.....+...
T Consensus 91 ~~~~~~la~~l~~~~~-~~~-------~v~~~~ggsea~~~al~~a~~~~----~----~~~vi~~~~~yhg~~~~~~~~ 154 (427)
T 3fq8_A 91 CALENVLAEMVNDAVP-SIE-------MVRFVNSGTEACMAVLRIMRAYT----G----RDKIIKFEGCYHGHADMFLVK 154 (427)
T ss_dssp CHHHHHHHHHHHHHST-TCS-------EEEEESSHHHHHHHHHHHHHHHH----C----CCEEEEEETCCCCSCGGGCSS
T ss_pred CHHHHHHHHHHHHhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh----C----CCEEEEECCCcCCCCHHHHHh
Confidence 4566678889999987 322 58999999999999998877531 0 233444444445332221111
Q ss_pred cCCC----------------CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhH
Q 037144 195 VGID----------------RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKP 254 (502)
Q Consensus 195 ~Glg----------------~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~e 254 (502)
.|.+ ...++.+|.+ |+++|++++++.. ..+.+|+++...+++|.+.| +++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------d~~~le~~l~~~~---~~~~~vi~~p~~~~~G~~~~~~~~l~~ 224 (427)
T 3fq8_A 155 AGSGVATLGLPSSPGVPKKTTANTLTTPYN-------DLEAVKALFAENP---GEIAGVILEPIVGNSGFIVPDAGFLEG 224 (427)
T ss_dssp CCTHHHHHTCCSCSSSCHHHHTTEEEEETT-------CHHHHHHHHHHST---TTEEEEEECSSBCTTSCBCCCTTHHHH
T ss_pred cCCcccccCCCCCCCCCCcccCceeecCCC-------CHHHHHHHHHhCC---CCEEEEEEcCCcCCCCCcCCCHHHHHH
Confidence 1110 0024444431 8999999997631 23567888888888899988 999
Q ss_pred HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCc
Q 037144 255 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNE 334 (502)
Q Consensus 255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~ 334 (502)
|.++|++||+++++|++|+++ ...........++ ..|.++++ |+++.....|+++.+ +... +.+.....+...
T Consensus 225 l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~~G~~~~~-~~~~-~~~~~~~~~~~~- 297 (427)
T 3fq8_A 225 LREITLEHDALLVFDEVITGF-RIAYGGVQEKFGV-TPDLTTLG--KIIGGGLPVGAYGGK-REIM-QLVAPAGPMYQA- 297 (427)
T ss_dssp HHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTC-CCSEEEEC--GGGGTTSSCEEEEEC-HHHH-TTBTTTSSBCCC-
T ss_pred HHHHHHHcCCEEEEecccccc-ccCcchhhHhcCC-CCChhhhh--hhhhCCcceEEEEEc-HHHH-HhhccCCCcccc-
Confidence 999999999999999999865 3221111111122 45776665 999866668887664 3332 222211111110
Q ss_pred cCCCCCcccccCCCcccccCCCCCCchHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCCee
Q 037144 335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLWVV---IRNFGVANLRNFIRSHVGMAKLFERLVTSDK---RFEVAFPRNFS 408 (502)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~---l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---~~~l~~~~~~~ 408 (502)
.+-....+.+.++ ++.+.. +++.++..++.+++++.|+++. ++....+....
T Consensus 298 -------------------~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~ 355 (427)
T 3fq8_A 298 -------------------GTLSGNPLAMTAGIKTLELLRQ---PGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSG 355 (427)
T ss_dssp -------------------CTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETT
T ss_pred -------------------CCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeee
Confidence 0001123333333 333322 3455666666677766665420 11111112234
Q ss_pred EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHH
Q 037144 409 LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHV 488 (502)
Q Consensus 409 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di 488 (502)
++.|.+......... . . .........++.+.+.++|.++.+.. . .|+++. ...+++++
T Consensus 356 ~~~~~~~~~~~~~~~----------~-~----~~~~~~~~~~l~~~l~~~Gi~v~~~~----~--~r~~~~-~~~t~e~i 413 (427)
T 3fq8_A 356 MFGFFFTEGPVHNYE----------D-A----KKSDLQKFSRFHRGMLEQGIYLAPSQ----F--EAGFTS-LAHTEEDI 413 (427)
T ss_dssp EEEEESSSCCCCSHH----------H-H----TTSCHHHHHHHHHHHHHTTEECCSST----T--SCEECC-TTCCHHHH
T ss_pred EEEEEEecCcccccc----------c-c----ccccHHHHHHHHHHHHHCCcEEecCC----C--CCEEee-CcCCHHHH
Confidence 555655332110000 0 0 00002234567788888886443221 1 144443 44678899
Q ss_pred HHHHHHHHHHHHhC
Q 037144 489 RAAWTVVQEHLEAF 502 (502)
Q Consensus 489 ~~~~~~l~~~~~~~ 502 (502)
++++++|+++.+++
T Consensus 414 ~~~l~~l~~~l~~~ 427 (427)
T 3fq8_A 414 DATLAAARTVMSAL 427 (427)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999987753
No 221
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.71 E-value=2.3e-15 Score=155.81 Aligned_cols=327 Identities=12% Similarity=0.027 Sum_probs=176.4
Q ss_pred HHHHHHHhhcCCCCcccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCcc
Q 037144 92 IVGEMLSSGFNVVGLDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRE 171 (502)
Q Consensus 92 ~~~~~l~~~~n~~~~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~ 171 (502)
.+.+.+...+.... .+ ....+++.++.+|++++++ ..+ ..++++||++|+..++.++|... +
T Consensus 77 ~v~~a~~~~~~~~~-~~---~~~~~~~~~la~~l~~~~~-~~~-------~v~~~~gg~eA~~~al~~ar~~~-~----- 138 (453)
T 2cy8_A 77 RVNAAIAEALSHGV-QY---AASHPLEVRWAERIVAAFP-SIR-------KLRFTGSGTETTLLALRVARAFT-G----- 138 (453)
T ss_dssp HHHHHHHHHHTTTC-SS---CSSCHHHHHHHHHHHHHCT-TCS-------EEEEESCHHHHHHHHHHHHHHHH-C-----
T ss_pred HHHHHHHHHHHhCC-CC---CCCCHHHHHHHHHHHhhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-C-----
Confidence 34455555554321 12 1245788899999999986 322 58999999999999999876421 1
Q ss_pred CCCCeEEEeCCCCchhHHHHHHH----------cCCCC---CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEE
Q 037144 172 NISKLVVYSSDQTHCAFQKAAQI----------VGIDR---KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLC 238 (502)
Q Consensus 172 ~~~~~~v~~s~~~H~s~~~aa~~----------~Glg~---~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv 238 (502)
++.+|+.....|.....+... .|+.. ..+..+|. .|+++|+++|++.. ..+.+|+
T Consensus 139 --~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi 206 (453)
T 2cy8_A 139 --RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANHG---SDIAAFI 206 (453)
T ss_dssp --CCEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHHHG---GGEEEEE
T ss_pred --CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhcC---CCEEEEE
Confidence 334444443344222211111 13200 02333332 38999999997531 1244666
Q ss_pred EecCCccccccCC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEe
Q 037144 239 ATVGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWV 314 (502)
Q Consensus 239 ~t~gtt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~ 314 (502)
++...+++|.+-| +++|.++|++||++|++|++|+++ ...+.......++ ..|.++ ++|+++.+...|+++.
T Consensus 207 ~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s--~sK~l~~G~~~G~v~~ 282 (453)
T 2cy8_A 207 AEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDV-QPDLTC--LAKASAGGLPGGILGG 282 (453)
T ss_dssp ECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTC-CCSEEE--EEGGGGTTSSCEEEEE
T ss_pred ECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCC-CCcEEE--EChhhhCCcceEEEec
Confidence 6665567898877 999999999999999999999865 3221111101122 467665 4599987677899887
Q ss_pred eCchhhhhhhcCC--c-ccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHH
Q 037144 315 KDPSCLLSTLSTN--P-QYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGV-ANLRNFIRSHVGMAKLFE 390 (502)
Q Consensus 315 r~~~~l~~~~~~~--~-~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~la~~l~ 390 (502)
++ +.. +.+... . .+... +. ....+.+.+++..+.. - .+++.++..+++++++
T Consensus 283 ~~-~~~-~~l~~~~~~~~~~~~-----------------t~----~~n~~~~aa~~aal~~~~-~~~~~~~~~~~~~~l~ 338 (453)
T 2cy8_A 283 RE-DVM-GVLSRGSDRKVLHQG-----------------TF----TGNPITAAAAIAAIDTIL-EDDVCAKINDLGQFAR 338 (453)
T ss_dssp CH-HHH-TTSSSCC--------------------------C----CCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHH
T ss_pred hH-HHH-HHhccccCCCceeCC-----------------CC----CCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHH
Confidence 64 322 222110 0 00000 00 1123333333332211 1 2345677778888888
Q ss_pred HHHhcC----CCeEEecCCCeeEEEEEeec-----C-cchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCc
Q 037144 391 RLVTSD----KRFEVAFPRNFSLVCFRVTP-----S-AVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGK 460 (502)
Q Consensus 391 ~~l~~~----~~~~l~~~~~~~~v~f~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 460 (502)
+.|+++ +....+ ++...++.+.+.. . ...... .. ...+ .....++.+.+.++|.
T Consensus 339 ~~L~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~-----~~------~~~~----~~~~~~l~~~l~~~Gv 402 (453)
T 2cy8_A 339 EAMNHLFARKGLNWLA-YGRFSGFHLMPGLPPNTTDTGSITRA-----EV------ARPD----VKMIAAMRMALILEGV 402 (453)
T ss_dssp HHHHHHHHHTTCCEEE-ECCTTEEEEEETSCTTCCCCHHHHTT-----CS------CCCC----HHHHHHHHHHHHHTTE
T ss_pred HHHHHHHhhCCCcEEE-EEeeeEEEEEEecccccccccccccc-----cc------cccc----HHHHHHHHHHHHHCCe
Confidence 888653 322222 3445567776643 1 000000 00 0000 1223467777777786
Q ss_pred EEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 461 VFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 461 ~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
++ .+ .+. +|++ ...++++|++++++|+++.++
T Consensus 403 ~v-~~---~~~--~~l~---~~~t~~~i~~~l~~l~~~l~~ 434 (453)
T 2cy8_A 403 DI-GG---RGS--VFLS---AQHEREHVEHLVTTFDRVLDR 434 (453)
T ss_dssp EC-BT---TTE--EECC---TTCCHHHHHHHHHHHHHHHHH
T ss_pred EE-eC---CCC--EEee---ccCCHHHHHHHHHHHHHHHHH
Confidence 43 22 122 5543 446788999999999987653
No 222
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.71 E-value=2.9e-15 Score=153.93 Aligned_cols=308 Identities=9% Similarity=0.029 Sum_probs=164.8
Q ss_pred HHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHc
Q 037144 116 ELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIV 195 (502)
Q Consensus 116 ~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~ 195 (502)
+...++.++++++++ ..+ ..+|++|||+|+..|+..++... + ++.+|......|.....+....
T Consensus 93 ~~~~~la~~l~~~~~-~~~-------~v~~~~sGsea~~~al~~a~~~~----~----~~~ii~~~~~yhg~~~~~~~~~ 156 (429)
T 4e77_A 93 EMEVKMAQLVTDLVP-TMD-------MVRMVNSGTEATMSAIRLARGYT----G----RDKIIKFEGCYHGHADCLLVKA 156 (429)
T ss_dssp HHHHHHHHHHHHHST-TCS-------EEEEESSHHHHHHHHHHHHHHHH----C----CCEEEEETTCCCC---------
T ss_pred HHHHHHHHHHHhhCC-CCC-------EEEEeCcHHHHHHHHHHHHHHhh----C----CCEEEEEcCccCCCChhhhhhc
Confidence 445566778888886 222 58999999999999999887531 0 2344444554554444332222
Q ss_pred CCCCC----------------CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHH
Q 037144 196 GIDRK----------------NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPL 255 (502)
Q Consensus 196 Glg~~----------------~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI 255 (502)
|.|.. .+..+|. .|+++|++++++.. ..+.+|+++...+..|.+.| +++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~g~~~~~~~~l~~l 226 (429)
T 4e77_A 157 GSGALTLGQPNSPGVPTDFAKHTLTCTY-------NDLASVRQAFEQYP---QEVACIIVEPVAGNMNCIPPLPEFLPGL 226 (429)
T ss_dssp ---------CCCTTSCGGGGTTEEEECT-------TCHHHHHHHHHHST---TTEEEEEECSSBCTTSCBCCCTTHHHHH
T ss_pred CCcccccCCCCcCCCCCccCCceeecCC-------CCHHHHHHHHHhcC---CCEEEEEECCccCCCCCcCCCHHHHHHH
Confidence 22110 1222221 28999999997521 12446666666666788877 9999
Q ss_pred HHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCc-ccccCc
Q 037144 256 CDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNP-QYLKNE 334 (502)
Q Consensus 256 ~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~-~yl~~~ 334 (502)
.++|++||++|++|++|+++ ...........++ ..|.++++ |.++.+...|+++.+ +... +.+.... .+...
T Consensus 227 ~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~-~pdi~t~s--K~~~~G~~~G~~~~~-~~~~-~~l~~~~~~~~~~- 299 (429)
T 4e77_A 227 RALCDEFGALLIIDEVMTGF-RVALAGAQDYYHV-IPDLTCLG--KIIGGGMPVGAFGGR-REVM-NALAPTGPVYQAG- 299 (429)
T ss_dssp HHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTC-CCSEEEEE--GGGGTTSCCEEEEEC-HHHH-TTBTTTSSBCC---
T ss_pred HHHHHHcCCEEEEeccccCc-ccCcchHHHhcCC-CCCeeeec--ccccCCCCeEEEEEC-HHHH-HHhccCCCccccC-
Confidence 99999999999999999865 3221111111122 35776554 999877778877664 3332 2221110 01100
Q ss_pred cCCCCCcccccCCCcccccCCCCCCchHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCe
Q 037144 335 ATDQEPKEQEVGYKDWQITLCRRFRSLKLW---VVIRNFGVANLRNFIRSHVGMAKLFERLVTS----DKRFEVAFPRNF 407 (502)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~----~~~~~l~~~~~~ 407 (502)
+-....+.+. ++++.+.. +++.++..++.+++++.|++ .+..... +...
T Consensus 300 --------------------t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g 355 (429)
T 4e77_A 300 --------------------TLSGNPIAMAAGFACLTEISQ---VGVYETLTELTDSLATGLRHAAKEENIPLVV-NHVG 355 (429)
T ss_dssp --------------------CCCCCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEE-EEET
T ss_pred --------------------CCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEE-EEee
Confidence 0011233333 33443322 34555666666666666654 3321111 2233
Q ss_pred eEEEEEeecCc-chhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144 408 SLVCFRVTPSA-VMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES 486 (502)
Q Consensus 408 ~~v~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~ 486 (502)
.++.+.+.... ... .. . ..........++.+.+.++|.++.+. +...+|++ ...+++
T Consensus 356 ~~~~~~~~~~~~~~~----------~~----~-~~~~~~~~~~~~~~~l~~~Gi~v~~~----~~~~~~~~---~~~t~e 413 (429)
T 4e77_A 356 GMFGLFFTNADTVTC----------YQ----D-VMNCDVERFKRFFHLMLEEGVYLAPS----AFEAGFMS---LAHSNE 413 (429)
T ss_dssp TEEEEECCSSSCCCS----------HH----H-HHTSCHHHHHHHHHHHHHTTEECCSS----TTSCEECC---TTCCHH
T ss_pred eEEEEEEccCccccc----------cc----c-cccccHHHHHHHHHHHHHCCeEEeec----CCCCEEEe---ccCCHH
Confidence 45666554320 000 00 0 00000123457788888888643322 11234443 446788
Q ss_pred HHHHHHHHHHHHHHhC
Q 037144 487 HVRAAWTVVQEHLEAF 502 (502)
Q Consensus 487 di~~~~~~l~~~~~~~ 502 (502)
++++++++|+++.+++
T Consensus 414 ~i~~~l~~l~~~l~~~ 429 (429)
T 4e77_A 414 DIQKTVNAARRCFAKL 429 (429)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999987653
No 223
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.71 E-value=1.4e-16 Score=162.30 Aligned_cols=325 Identities=9% Similarity=0.024 Sum_probs=201.8
Q ss_pred HHHHHHHHHHhhc-C-CCCcccccChhhHHHHHHHHHHHHHhcCCC--CccCcCCCCcEEEcCCchHHHHHHHHHHHHHH
Q 037144 89 VAGIVGEMLSSGF-N-VVGLDWISSPAAVELENIVMDWLGQMLDLP--KSFLFSGNGGGVIQGTTCEALLCTLTAARDRV 164 (502)
Q Consensus 89 ~~~~~~~~l~~~~-n-~~~~~~~~~p~~~~le~~~~~~l~~l~g~~--~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~ 164 (502)
++..+.+... .+ + .....|....+..++.+.+.+|+.+..+.+ ++. -.+++|.||++|+..++.+..+.
T Consensus 48 ~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-----i~i~~t~G~~~al~~~~~~l~~~- 120 (405)
T 3k7y_A 48 IFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKK-----ICTIQCIGGTGAIFVLLEFLKML- 120 (405)
T ss_dssp CCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTC-----EEEEEEEHHHHHHHHHHHHHHTT-
T ss_pred ccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCccccccc-----eEEEEcCchHHHHHHHHHHHHhc-
Confidence 4455656554 32 2 234567777788999999999997665543 110 03588999999887776654431
Q ss_pred HHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecC-C
Q 037144 165 LKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVG-T 243 (502)
Q Consensus 165 ~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g-t 243 (502)
.+ +.|+++.+++..+..+++..|. +++.+|+...+++.+|+++|++++++..+ ..+|+++.+ +
T Consensus 121 --------~~-d~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~----~~~i~l~~~~~ 184 (405)
T 3k7y_A 121 --------NV-ETLYVTNPPYINHVNMIESRGF---NLKYINFFDYNLIDINYDLFLNDLRNIPN----GSSVILQISCY 184 (405)
T ss_dssp --------TC-CEEEEESSCCHHHHHHHHTTTC---EEEEECCEETTTTEECHHHHHHHHHHSCS----SCEEEECCSSC
T ss_pred --------CC-CEEEEeCCCCHhHHHHHHHcCC---eEEEEeccccccCCcCHHHHHHHHHhCCC----CeEEEEeCCCC
Confidence 15 7899999999999999999999 99999983223579999999999975321 225666654 8
Q ss_pred ccccccC---ChhHHHHHHHHhCCEEEeecccccccccC-c----cchhhhcCCCCCC-eeEEccCCcCC-CCCcceEEE
Q 037144 244 TAITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACIC-P----EFRHFIDGVECVD-SFSFNPHKWLF-TTLDCCCLW 313 (502)
Q Consensus 244 t~~G~id---pl~eI~~i~~~~g~~lhVDaA~g~~~~~~-~----~~~~~~~~~~~aD-si~~~~hK~l~-~p~~~g~~~ 313 (502)
|+||.+- .+++|+++|++||+|+++|.+|....... + ..+. +... .-. .+..++.|.++ ....+|+++
T Consensus 185 NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~-~~~~-~~~~i~~~S~SK~~~l~GlRiG~~~ 262 (405)
T 3k7y_A 185 NPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRK-FEEK-NIAFSVCQSFSKNMSLYGERAGALH 262 (405)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHH-HHTT-TCCEEEEEECTTTSCCTTTTEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHH-HHhc-CCcEEEEeeCCccCCCccccceEEE
Confidence 9999984 57788899999999999999997765321 0 0111 1111 122 44567999997 567788875
Q ss_pred e--eCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh-----c---HHHHHHHHHHHH
Q 037144 314 V--KDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF-----G---VANLRNFIRSHV 383 (502)
Q Consensus 314 ~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g---~~g~~~~~~~~~ 383 (502)
+ .++.......... ..+.... .+ ....+...++...+ + .+.+.++.+++.
T Consensus 263 ~~~~~~~~~~~~~~~l-~~~~~~~------------------~~-~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~ 322 (405)
T 3k7y_A 263 IVCKNQEEKKIVFNNL-CFIVRKF------------------YS-SPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRIT 322 (405)
T ss_dssp EECSSHHHHHHHHHHH-HHHHHTT------------------TS-SCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHH-HHHHhcc------------------cC-CCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 4 3443321111000 0000000 00 00122222222222 1 123455667788
Q ss_pred HHHHHHHHHHh----cCC---CeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHH
Q 037144 384 GMAKLFERLVT----SDK---RFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESIN 456 (502)
Q Consensus 384 ~la~~l~~~l~----~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 456 (502)
++++++.+.|+ ++. ++++. +|+.++++|.-.+. +++++|.
T Consensus 323 ~~R~~l~~~L~~~~~~~g~~~~~~~~-~p~gg~f~~~~l~~--------------------------------~~~~~L~ 369 (405)
T 3k7y_A 323 NNRILFFNKLETYQKKYNLNYDWNVY-KKQRGLFSFVPLLA--------------------------------KIAEHLK 369 (405)
T ss_dssp HHHHHHHHHHHHHGGGGTCCCCGGGG-SSCCSSEEECGGGG--------------------------------GGTTTTT
T ss_pred HHHHHHHHHHHhhhhhcCCCCCCccc-cCCceEEEecCCCH--------------------------------HHHHHHH
Confidence 89999999998 762 14544 56677766632110 1234453
Q ss_pred hcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 457 VSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 457 ~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
+.| +++.+. + |+++++ .++++|++++++|.++.++
T Consensus 370 ~~g-V~v~p~---~----Ris~a~--~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 370 THH-IYIINN---G----RINVSG--ITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp TTT-EECCTT---S----EEEGGG--CCTTHHHHHHHHHHHHHHC
T ss_pred HCC-EeecCC---C----eEEEec--cCHHHHHHHHHHHHHHHhh
Confidence 345 444442 2 999864 3556899999999998765
No 224
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.70 E-value=2.3e-15 Score=156.57 Aligned_cols=315 Identities=11% Similarity=0.028 Sum_probs=176.4
Q ss_pred hHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHH-hC----------------ccCC-CC
Q 037144 114 AVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKK-IG----------------RENI-SK 175 (502)
Q Consensus 114 ~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~-~~----------------~~~~-~~ 175 (502)
..++++++.+.++++++...+ .++|++|||+||..|+.+++.....+ .+ ..|. ++
T Consensus 108 ~~~l~~~la~~l~~~~~~~~~-------~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~ 180 (472)
T 1ohv_A 108 PENFVEKLRESLLSVAPKGMS-------QLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDY 180 (472)
T ss_dssp BTTHHHHHHHTGGGGCCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCC
T ss_pred HHHHHHHHHHHHHHhCCCCcC-------EEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCC
Confidence 356777777777777643322 58999999999999999997543210 01 0111 13
Q ss_pred eEEEeCCCCchhHHHHHHHcCC--------CCCCEEEEecCCC-CC------c-----ccCHHHHHHHHHHHHhcCCccE
Q 037144 176 LVVYSSDQTHCAFQKAAQIVGI--------DRKNIRAIKTTKS-SS------Y-----GLSAESVLSQINLDVEAELIPL 235 (502)
Q Consensus 176 ~~v~~s~~~H~s~~~aa~~~Gl--------g~~~v~~v~~~~~-~~------~-----~~d~~~Le~~i~~~~~~g~~p~ 235 (502)
.+|......|.+..-+..+.|. ....+..++.... .. + ..|+++|+++|++....+..+.
T Consensus 181 ~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 260 (472)
T 1ohv_A 181 SILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVA 260 (472)
T ss_dssp EEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred eEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEE
Confidence 3444444556555555444442 1111122333210 00 0 2378999999976422122355
Q ss_pred EEEEecCCccccccCC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCC-CCCeeEEccCCcC-CCCCcc
Q 037144 236 FLCATVGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-CVDSFSFNPHKWL-FTTLDC 309 (502)
Q Consensus 236 ~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~-~aDsi~~~~hK~l-~~p~~~ 309 (502)
+|++....+++|.+-| +++|.++|++||++||+|++|.++......+.....++. ..|.++++ |++ + .
T Consensus 261 ~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~s--K~~l~----G 334 (472)
T 1ohv_A 261 GIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFS--KKMMT----G 334 (472)
T ss_dssp EEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEEC--GGGSS----E
T ss_pred EEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEc--ccccc----C
Confidence 7777777778998877 999999999999999999999763221110011011221 37887766 984 3 2
Q ss_pred eEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 037144 310 CCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLF 389 (502)
Q Consensus 310 g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l 389 (502)
|++ + ++. +. ...+.+... ++ ++......++.++++.+.. .++.++..+++++|
T Consensus 335 G~~-~-~~~-~~---~~~~~~~~~-----------------T~-~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l 387 (472)
T 1ohv_A 335 GFF-H-KEE-FR---PNAPYRIFN-----------------TW-LGDPSKNLLLAEVINIIKR---EDLLSNAAHAGKVL 387 (472)
T ss_dssp EEE-E-CGG-GS---CSSSSSSCC-----------------SS-SSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHH
T ss_pred Ccc-C-chh-hc---ccccccccC-----------------cc-CccHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHH
Confidence 444 3 222 11 001000000 00 1111122233344444322 24567778888888
Q ss_pred HHHHhcC----CC-eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEE
Q 037144 390 ERLVTSD----KR-FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMT 464 (502)
Q Consensus 390 ~~~l~~~----~~-~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 464 (502)
++.|+++ |+ +.-+ .+...++.|.+.. ......+.++|.++|..+..
T Consensus 388 ~~~L~~l~~~~~~~v~~~-~~~g~~~~~~~~~----------------------------~~~~~~~~~~l~~~Gv~~~~ 438 (472)
T 1ohv_A 388 LTGLLDLQARYPQFISRV-RGRGTFCSFDTPD----------------------------ESIRNKLISIARNKGVMLGG 438 (472)
T ss_dssp HHHHHHHHHHCTTTCEEE-EEETTEEEEECSS----------------------------HHHHHHHHHHHHHTTEECEE
T ss_pred HHHHHHHHhhCCCcEEee-cCCceEEEEEeCC----------------------------hhHHHHHHHHHHHCCeEEec
Confidence 8888654 43 3322 2233455554321 11235677777778865433
Q ss_pred eeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144 465 HAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF 502 (502)
Q Consensus 465 ~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~ 502 (502)
. +..+||+++. ..++++||+++++.|.++.+++
T Consensus 439 ~----g~~~iRi~~~-~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 439 C----GDKSIRFRPT-LVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp E----TTTEEEECCC-TTCCHHHHHHHHHHHHHHHHTC
T ss_pred C----CCCEEEEECC-CCCCHHHHHHHHHHHHHHHHhc
Confidence 2 3458999875 5577889999999999987653
No 225
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.69 E-value=1.8e-15 Score=155.79 Aligned_cols=309 Identities=11% Similarity=0.036 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
.+...++.++++++++ ..+ ..+|++|||+|+..++.++|... + ++.+|+.....|.....+...
T Consensus 95 ~~~~~~l~~~la~~~~-~~~-------~v~~~~sgseA~~~al~~ar~~~-~-------~~~vi~~~~~yhg~~~~~~~~ 158 (434)
T 2epj_A 95 GEAEVLLAEKILGYVK-RGG-------MIRFVNSGTEATMTAIRLARGYT-G-------RDLILKFDGCYHGSHDAVLVA 158 (434)
T ss_dssp CHHHHHHHHHHHHHHC-TTC-------EEEEESSHHHHHHHHHHHHHHHH-C-------CCEEEEEETCCCCSSGGGSEE
T ss_pred CHHHHHHHHHHHHhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-C-------CCeEEEEcCCcCCCCHHHHHh
Confidence 3455667788888874 222 58999999999999999876421 1 334444443444322211111
Q ss_pred -------------cCCC---CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhH
Q 037144 195 -------------VGID---RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKP 254 (502)
Q Consensus 195 -------------~Glg---~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~e 254 (502)
.|+. ...++.+|. .|+++|+++|++.. ..+.+|+++...+++|.+.| +++
T Consensus 159 ~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~ 228 (434)
T 2epj_A 159 AGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERVFAEYG---DRIAGVIVEPVIANAGVIPPRREFLAA 228 (434)
T ss_dssp CC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHHHHHHG---GGEEEEEECSSBCSSSCBCCCHHHHHH
T ss_pred cCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHHHHhCC---CCEEEEEEeCCcCCCCccCCCHHHHHH
Confidence 1220 013555653 28999999997531 12456777666667899888 999
Q ss_pred HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcc-cccC
Q 037144 255 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQ-YLKN 333 (502)
Q Consensus 255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~-yl~~ 333 (502)
|.++|++||++|++|++|+++ ...+.......++ ..|.+++ +|+++.+...|+++.++ +.. +.+..... +...
T Consensus 229 l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s~--sK~l~~G~~~G~v~~~~-~~~-~~l~~~~~~~~~~ 302 (434)
T 2epj_A 229 LQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNI-EGDIIVL--GKIIGGGFPVGAVAGSR-EVM-SLLTPQGKVFNAG 302 (434)
T ss_dssp HHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTC-CCSEEEE--EGGGGTTSSCEEEEECH-HHH-TTBTTTSSBCCCC
T ss_pred HHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCC-CCCeeee--cchhcCCcceeeeeecH-HHH-HhhccCCCcccCC
Confidence 999999999999999999865 3222111111122 4676655 59998766788888764 322 22221000 1000
Q ss_pred ccCCCCCcccccCCCcccccCCCCCCchHH---HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCCe
Q 037144 334 EATDQEPKEQEVGYKDWQITLCRRFRSLKL---WVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK---RFEVAFPRNF 407 (502)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~---~~~l~~~~~~ 407 (502)
++ ....+.+ ..+++.+.. +++.++..++++++++.|+++. ++....++..
T Consensus 303 -----------------t~----~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g 358 (434)
T 2epj_A 303 -----------------TF----NAHPITMAAGLATLKALEE---EPVYSVSREAAKALEEAASEVLDRTGLPYTINRVE 358 (434)
T ss_dssp -----------------TT----TTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEET
T ss_pred -----------------CC----CcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEee
Confidence 00 1122333 333443322 3466777788888888887641 2321112334
Q ss_pred eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144 408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH 487 (502)
Q Consensus 408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d 487 (502)
+++.+.+.......... ..........++.+.|.++|.+ +.+.. ...+|++ ...++++
T Consensus 359 ~~~~i~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~l~~~Gv~-v~~~~---~~~~~~~---~~~t~e~ 416 (434)
T 2epj_A 359 SMMQLFIGVEEVSNAAQ---------------ARKADKKFYVKLHEEMLRRGVF-IAPSN---LEAVFTG---LPHQGEA 416 (434)
T ss_dssp TEEEEEETCSCCSSHHH---------------HTTSCHHHHHHHHHHHHHTTEE-CCSST---TSCEECC---TTCSHHH
T ss_pred eEEEEEEeCCCcccchh---------------ccccCHHHHHHHHHHHHHCCeE-EeccC---CCcEEEe---ccCCHHH
Confidence 56666664310000000 0000012245677778778864 33321 1234543 3467889
Q ss_pred HHHHHHHHHHHHHh
Q 037144 488 VRAAWTVVQEHLEA 501 (502)
Q Consensus 488 i~~~~~~l~~~~~~ 501 (502)
++++++.|+++.++
T Consensus 417 i~~~l~~l~~~l~~ 430 (434)
T 2epj_A 417 LEIAVEGLRSSLKT 430 (434)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999987654
No 226
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.68 E-value=2.5e-15 Score=152.60 Aligned_cols=291 Identities=10% Similarity=-0.018 Sum_probs=182.6
Q ss_pred cccccChhh-----HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCe----
Q 037144 106 LDWISSPAA-----VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKL---- 176 (502)
Q Consensus 106 ~~~~~~p~~-----~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~---- 176 (502)
..|....+. .++++.+.+|+. ..|.+... ....++|+|+++++..++.+..+ +++
T Consensus 57 ~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~----~~~i~~t~G~~~al~~~~~~l~~-----------~Gd~~~~ 120 (391)
T 3bwn_A 57 SYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATE----DRYIVVGTGSTQLCQAAVHALSS-----------LARSQPV 120 (391)
T ss_dssp SSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCS----SSEEEEEEHHHHHHHHHHHHHHH-----------TSSSSSE
T ss_pred hcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCC----CCeEEEeCChHHHHHHHHHHhcC-----------CCCCCcc
Confidence 456655565 889999988887 45653210 01589999999998877766544 566
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHH
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLC 256 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~ 256 (502)
.|+++.+.|.++..+++..|. +++.+++|.+ .++ . ..+.+|+++.++|+||.+-+ +|+
T Consensus 121 ~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~d~~---~l~--------~------~~~k~v~l~~p~NPtG~~~~--~l~ 178 (391)
T 3bwn_A 121 SVVAAAPFYSTYVEETTYVRS---GMYKWEGDAW---GFD--------K------KGPYIELVTSPNNPDGTIRE--TVV 178 (391)
T ss_dssp EEEECSSCCTHHHHHHHTTCB---TTEEEEEEST---TCC--------C------CSCEEEEEESSCTTTCCCCC--CCC
T ss_pred eEEEcCCCchhHHHHHHHcCC---eEEEecCCHH---HcC--------C------CCCEEEEECCCCCCCchhHH--HHH
Confidence 899999999999999999999 9999998753 222 0 12457778999999999975 554
Q ss_pred HHHHHhC--CEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccC
Q 037144 257 DVAKQFG--IWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKN 333 (502)
Q Consensus 257 ~i~~~~g--~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~ 333 (502)
+ ++++ +++++|.+|+... .. .+......+.+..++||.++.| ..+|++++.++.... .+.....+...
T Consensus 179 ~--~~~~~~~~ii~De~y~~~~-----~~-~l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~-~l~~~~~~~~~ 249 (391)
T 3bwn_A 179 N--RPDDDEAKVIHDFAYYWPH-----YT-PITRRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAK-KMVEYIIVNSI 249 (391)
T ss_dssp -------CCCEEEEECTTCSTT-----TS-CCCCCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHH-HHHHHHHHHHS
T ss_pred H--HhhcCCCEEEEeCCCCCCC-----CC-ccccCCCCeEEEEechhhcCCCccceEEEEecCHHHHH-HHHHHhccccc
Confidence 4 2255 9999999996311 11 1111235678888999998744 446888775554332 22111111100
Q ss_pred ccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--c----------HHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 037144 334 EATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--G----------VANLRNFIRSHVGMAKLFERLVTSDKRFEV 401 (502)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g----------~~g~~~~~~~~~~la~~l~~~l~~~~~~~l 401 (502)
....+..+++...+ + .+.++++.+++.++++++.+.|+++|++++
T Consensus 250 -----------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 306 (391)
T 3bwn_A 250 -----------------------GVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTL 306 (391)
T ss_dssp -----------------------SCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEEC
T ss_pred -----------------------CCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 00222223332222 2 345778888899999999999999888877
Q ss_pred ecCCCe------------e-EEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE
Q 037144 402 AFPRNF------------S-LVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV 468 (502)
Q Consensus 402 ~~~~~~------------~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~ 468 (502)
..+... + .+++.+... ..+.+.+.+.|..+.++..+
T Consensus 307 ~~p~~~~~~f~~~~~~~~g~~~~~~~~~~-------------------------------~~~~~~l~~~gV~v~pg~~f 355 (391)
T 3bwn_A 307 PKYPEAFCNYFGKSLESYPAFAWLGTKEE-------------------------------TDLVSELRRHKVMSRAGERC 355 (391)
T ss_dssp CCCCCEEETTTTEEECCCCSEEEEEESSS-------------------------------CCHHHHHHHTTEECEEGGGG
T ss_pred ccCCccccccccccCCCcceEEEecCCcH-------------------------------HHHHHHHHHCCEEEccCCCC
Confidence 532211 1 233443211 12334455567655544433
Q ss_pred C-CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 469 G-GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 469 ~-g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
. +..++|++++ ++++++++++++|+++.+
T Consensus 356 g~~~~~iRis~~---~~~e~i~~~~~~L~~~~~ 385 (391)
T 3bwn_A 356 GSDKKHVRVSML---SREDVFNVFLERLANMKL 385 (391)
T ss_dssp TCCTTEEEEESC---SCHHHHHHHHHHHHSCC-
T ss_pred CCCCCEEEEEec---CCHHHHHHHHHHHHHHHH
Confidence 3 2568999987 367799999999987654
No 227
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.67 E-value=8.6e-16 Score=162.41 Aligned_cols=189 Identities=8% Similarity=0.029 Sum_probs=127.8
Q ss_pred ccccChhhHHHHHH-HHHHHHHhcCC---C-CccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeC
Q 037144 107 DWISSPAAVELENI-VMDWLGQMLDL---P-KSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSS 181 (502)
Q Consensus 107 ~~~~~p~~~~le~~-~~~~l~~l~g~---~-~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s 181 (502)
.|....+...+.++ +..|+.+.++. + .. ...++|+|+++++..++.+...+.+ ..+++.|+++
T Consensus 133 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~------~~I~~t~G~~eal~~~~~~l~~~~l------~~~Gd~Vlv~ 200 (546)
T 2zy4_A 133 NYPVPPRMLNISEKIVRQYIIREMGADAIPSES------VNLFAVEGGTAAMAYIFESLKLNGL------LKAGDKVAIG 200 (546)
T ss_dssp SCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGG------EEEEEEEHHHHHHHHHHHHHHHTTS------SCTTCEEEEE
T ss_pred CCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCc------ceEEEECCHHHHHHHHHHHhhhhhc------CCCCCEEEEe
Confidence 45544444445544 55566776543 1 11 2689999999998776655321100 0156788888
Q ss_pred CCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC---hhHHHHH
Q 037144 182 DQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP---LKPLCDV 258 (502)
Q Consensus 182 ~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp---l~eI~~i 258 (502)
.++|..+..++.+.+.|. +++.+|+++++++.+|+++|++++... +.+|+++.++|+||.+-+ +++|+++
T Consensus 201 ~P~y~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~p~NPtG~~~~~~~l~~l~~~ 273 (546)
T 2zy4_A 201 MPVFTPYIEIPELAQYAL-EEVAINADPSLNWQYPDSELDKLKDPA------IKIFFCVNPSNPPSVKMDQRSLERVRNI 273 (546)
T ss_dssp ESCCHHHHHHHHSTTSCC-EEEEEECBGGGTTBCCHHHHGGGGSTT------EEEEEEESSCSSSCBCCCHHHHHHHHHH
T ss_pred CCCCccHHHHHHHcCCCc-EEEEEecCcccCCCCCHHHHHHhhCCC------CeEEEEECCCCCCCccCCHHHHHHHHHH
Confidence 899999988877654322 788899876556789999998876332 447777899999999966 6667888
Q ss_pred H--HHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCc
Q 037144 259 A--KQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDP 317 (502)
Q Consensus 259 ~--~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~ 317 (502)
| +++|+++++|.+|+.+.......... ....+.+..+++|+++.| ..+|+++..+.
T Consensus 274 a~~~~~~~~ii~De~y~~~~~~~~s~~~~---~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~ 332 (546)
T 2zy4_A 274 VAEHRPDLMILTDDVYGTFADDFQSLFAI---CPENTLLVYSFSKYFGATGWRLGVVAAHQQ 332 (546)
T ss_dssp HHHTCTTCEEEEECTTGGGSTTCCCHHHH---CGGGEEEEEESTTTTTCGGGCEEEEEEESS
T ss_pred HHhccCCcEEEEeCcchhhcccCcCHHHh---CCCCEEEEEeCccccCCCCcceEEEEECCH
Confidence 8 77999999999998765321111111 113457788899999744 56898888765
No 228
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.62 E-value=2.6e-14 Score=146.58 Aligned_cols=306 Identities=12% Similarity=0.058 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHH
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQI 194 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~ 194 (502)
.+++.++.++++++++ ..+ ..++++||++|+..++.+||... + ++.+|+.+...|.....+...
T Consensus 91 ~~~~~~l~~~l~~~~~-~~~-------~v~~~~~g~ea~~~al~~ar~~~-~-------~~~vi~~~~~yhg~~~~~~~~ 154 (424)
T 2e7u_A 91 SPLEVALAKKVKRAYP-FVD-------LVRFVNSGTEATMSALRLARGYT-G-------RPYIVKFRGNYHGHADGLLVE 154 (424)
T ss_dssp CHHHHHHHHHHHHHCT-TCC-------EEEEESSHHHHHHHHHHHHHHHH-C-------CCEEEEETTCCCCCCGGGSEE
T ss_pred CHHHHHHHHHHHHhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-C-------CCEEEEECCCcCCCcHHHHHh
Confidence 4456677788888875 222 58999999999999999876431 1 344555544445322222111
Q ss_pred c-------------CCC---CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhH
Q 037144 195 V-------------GID---RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKP 254 (502)
Q Consensus 195 ~-------------Glg---~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~e 254 (502)
. |+. ...++.+|. .|+++|++++++.. ..+.+|+++...+++|.+-| +++
T Consensus 155 ~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~ 224 (424)
T 2e7u_A 155 AGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREVLKRRG---EEIAAIIFEPVVGNAGVLVPTEDFLKA 224 (424)
T ss_dssp CCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCHHHHHH
T ss_pred cCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHHHHhCC---CCEEEEEEeCCCCCCCCcCCCHHHHHH
Confidence 1 210 013455543 38999999997531 12446666655555898877 999
Q ss_pred HHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC-CcccccC
Q 037144 255 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST-NPQYLKN 333 (502)
Q Consensus 255 I~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~-~~~yl~~ 333 (502)
|.++ ++||+++++|.+|+++ ...........++ ..|.+ +++|+++.+...|+++.++ +.. +.+.. ...+...
T Consensus 225 l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~--s~sK~l~~G~~~G~~~~~~-~~~-~~~~~~~~~~~~~ 297 (424)
T 2e7u_A 225 LHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGL-KPDLV--TLGKILGGGLPAAAYAGRR-EIM-EKVAPLGPVYQAG 297 (424)
T ss_dssp HHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEE--EECGGGGTTSSCEEEEECH-HHH-TTBTTTSSBCCCC
T ss_pred HHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCC-Ccchh--hhhhhhhCCcceEEEEEcH-HHH-hhhcccCCcccCC
Confidence 9999 9999999999999865 3221111111122 46765 5579998767788888764 322 22221 1001100
Q ss_pred ccCCCCCcccccCCCcccccCCCCCCchHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCe
Q 037144 334 EATDQEPKEQEVGYKDWQITLCRRFRSLKLW---VVIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVAFPRNF 407 (502)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~~~~~~ 407 (502)
++ ....+.+. ++++.+.. .+++.++..++++++++.|+++ .++....++..
T Consensus 298 -----------------t~----~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g 354 (424)
T 2e7u_A 298 -----------------TL----SGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVG 354 (424)
T ss_dssp -----------------TT----CSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEET
T ss_pred -----------------CC----CCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeec
Confidence 00 11233333 33333212 2456777888888888888764 12321112334
Q ss_pred eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144 408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH 487 (502)
Q Consensus 408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d 487 (502)
+++.+.+......... ...........++.+.+.++|.++ .+.. ...+|++ ...++++
T Consensus 355 ~~~~i~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~l~~~Gv~v-~~~~---~~~~~~~---~~~t~~~ 412 (424)
T 2e7u_A 355 SMITVFFTEGPVVTFQ---------------DARRTDTELFKRFFHGLLDRGIYW-PPSN---FEAAFLS---VAHREED 412 (424)
T ss_dssp TEEEEESSSSCCCSHH---------------HHTTSCHHHHHHHHHHHHTTTEEC-CSSS---SSCEECC---TTCCHHH
T ss_pred eEEEEEEeCCCCcchh---------------hhcccCHHHHHHHHHHHHHCCeEE-eccC---CCceEee---ccCCHHH
Confidence 4666665431100000 000000122456778888878643 3321 1224544 3467789
Q ss_pred HHHHHHHHHHH
Q 037144 488 VRAAWTVVQEH 498 (502)
Q Consensus 488 i~~~~~~l~~~ 498 (502)
+++++++|+++
T Consensus 413 i~~~l~~l~~~ 423 (424)
T 2e7u_A 413 VEKTLEALRKA 423 (424)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 229
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.60 E-value=5.2e-15 Score=151.98 Aligned_cols=307 Identities=9% Similarity=-0.063 Sum_probs=190.4
Q ss_pred HHHHHHHHHHhhc-CCC--CcccccCh-h---hHHHHHHHHHHHHHhcCC--CCccCcCCCCcEEEcCCchHHHHHHHHH
Q 037144 89 VAGIVGEMLSSGF-NVV--GLDWISSP-A---AVELENIVMDWLGQMLDL--PKSFLFSGNGGGVIQGTTCEALLCTLTA 159 (502)
Q Consensus 89 ~~~~~~~~l~~~~-n~~--~~~~~~~p-~---~~~le~~~~~~l~~l~g~--~~~~~~~~~~~g~~t~ggt~a~~~al~~ 159 (502)
+|..+.+.+...+ ... ...|.... + ..++++.+.+|+.+..+. +.+ ..++|+|+++++..++.+
T Consensus 70 ~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~-------~iv~t~G~~~al~~~~~~ 142 (427)
T 2hox_A 70 EEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDR-------YIVFGVGVTQLIHGLVIS 142 (427)
T ss_dssp HHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTC-------EEEEESHHHHHHHHHHHH
T ss_pred CCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCC-------EEEEeCCHHHHHHHHHHH
Confidence 3444555555544 222 22355444 5 688999999999876553 222 589999999998777665
Q ss_pred H--------HHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcC
Q 037144 160 A--------RDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAE 231 (502)
Q Consensus 160 a--------~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g 231 (502)
. .+ +++.|+++.+.|..+...++..|. +++. +.+|+++|++++++.
T Consensus 143 l~~~~~~~~~~-----------~Gd~Vlv~~P~y~~~~~~~~~~g~---~~~~--------~~~d~~~l~~~~~~~---- 196 (427)
T 2hox_A 143 LSPNMTATPDA-----------PESKVVAHAPFYPVFREQTKYFDK---KGYV--------WAGNAANYVNVSNPE---- 196 (427)
T ss_dssp HSCCTTTCTTS-----------CCEEEEECSSCCHHHHHHHHHSCB---TTEE--------EEEEGGGGTTCSCGG----
T ss_pred HhhccccccCC-----------CCCEEEEeCCCcccHHHHHHHcCC---eeee--------ecCCHHHHHHhhcCC----
Confidence 5 22 678999999999999999999998 7653 356778888877543
Q ss_pred CccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-Ccce
Q 037144 232 LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCC 310 (502)
Q Consensus 232 ~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g 310 (502)
+.+|+++.++|+||.+-+ +. ++ +++.+.|.++.... ..... +. ...+.+..+++|.++.| ..+|
T Consensus 197 --~k~v~l~~p~NPtG~~~~-~~----l~--~~~~i~d~~~~~~~---~s~~~-~~--~~~~i~~~S~SK~~g~~G~RiG 261 (427)
T 2hox_A 197 --QYIEMVTSPNNPEGLLRH-AV----IK--GCKSIYDMVYYWPH---YTPIK-YK--ADEDILLFTMSKFTGHSGSRFG 261 (427)
T ss_dssp --GEEEEEESSCTTTCCCCC-CS----ST--TCEEEEECTTCSTT---TSCCC-SC--BCCSEEEEEHHHHTSCGGGCCE
T ss_pred --ceEEEEcCCCCCcccccH-HH----Hc--CCCEEEeecccCCC---CCccc-cC--CCceEEEEeChhcCCCCCceEE
Confidence 347788899999999988 42 33 56788887663211 01111 11 35788999999998744 4578
Q ss_pred EEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHh--cH-----------HHHHH
Q 037144 311 CLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNF--GV-----------ANLRN 377 (502)
Q Consensus 311 ~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~-----------~g~~~ 377 (502)
+++++++....... ....+... ....+..+++...+ +. +.+++
T Consensus 262 ~~~~~~~~l~~~l~-~~~~~~~~-----------------------~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~ 317 (427)
T 2hox_A 262 WALIKDESVYNNLL-NYMTKNTE-----------------------GTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTF 317 (427)
T ss_dssp EEEECCHHHHHHHH-HHHHHHTS-----------------------SCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHH
T ss_pred EEEECCHHHHHHHH-HHHHhcCC-----------------------CCCHHHHHHHHHHhhcchhhhccccchhHHHHHH
Confidence 88886655433221 11111100 00222222333222 11 23455
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEE--ec-----------CCCeeE-EEEEeecCcchhhhhhcccCCCcccccccchhHh
Q 037144 378 FIRSHVGMAKLFERLVTSDKRFEV--AF-----------PRNFSL-VCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEER 443 (502)
Q Consensus 378 ~~~~~~~la~~l~~~l~~~~~~~l--~~-----------~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (502)
..+++.++++++.+.|++.+++++ +. .|..++ +++.+...
T Consensus 318 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~-------------------------- 371 (427)
T 2hox_A 318 GFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWE-------------------------- 371 (427)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSG--------------------------
T ss_pred HHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCCc--------------------------
Confidence 667888899999999999888876 21 122233 33444321
Q ss_pred hHHHHHHHHHHHH-hcCcEEEEeeeEC-CEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 444 TNEFNRELLESIN-VSGKVFMTHAIVG-GIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 444 ~~~~~~~l~~~l~-~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
..++.+++. +.|..+.++..+. +..++|+|+++ ++++++++++.|.++.+
T Consensus 372 ----~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~---~~e~l~~~l~~l~~~~~ 423 (427)
T 2hox_A 372 ----EDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK---TQDDFDQLMYYLKDMVK 423 (427)
T ss_dssp ----GGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS---CHHHHHHHHHHHHHHHT
T ss_pred ----HHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecC---CHHHHHHHHHHHHHHHh
Confidence 113344443 4576544443333 35789999873 67799999999988764
No 230
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.59 E-value=2.3e-13 Score=135.87 Aligned_cols=353 Identities=12% Similarity=0.063 Sum_probs=196.8
Q ss_pred ccCCCCCCHHHHHHHHHHhhc-CCCCcc------cccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEE-cCCchHH
Q 037144 81 AYFPATSSVAGIVGEMLSSGF-NVVGLD------WISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVI-QGTTCEA 152 (502)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~-n~~~~~------~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a 152 (502)
...++-+.....+.+.+.+.+ |.+.-+ |...-...++|.-+++..+++||++... .++-+ ..||+.|
T Consensus 58 eLIASEN~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~-----w~VNVQP~SGs~A 132 (490)
T 3ou5_A 58 ELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQ-----WGVNVQPYSGSPA 132 (490)
T ss_dssp ECCTTCCCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTT-----EEEECCCSSHHHH
T ss_pred eEecCCCcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccc-----cCCCCCcCCHHHH
Confidence 334443333344555555544 444333 3344457899999999999999997542 02233 4489999
Q ss_pred HHHHHHHHHHHHHHHhCccCCCCeEEEeCCC---CchhHHH-----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHH
Q 037144 153 LLCTLTAARDRVLKKIGRENISKLVVYSSDQ---THCAFQK-----AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQI 224 (502)
Q Consensus 153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~---~H~s~~~-----aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i 224 (502)
|+.+..+..+ |++.|+.-+. +|.+.-. .....|.-. +.+..++|++ ++.+|.+++++..
T Consensus 133 N~avy~All~-----------PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~-~~~~Y~vd~~-t~~IDyd~~~~~A 199 (490)
T 3ou5_A 133 NLAVYTALLQ-----------PHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFF-ESMPYKLNPK-TGLIDYNQLALTA 199 (490)
T ss_dssp HHHHHHHHCC------------CCCEECBC-----------------------------CBCEETT-TTEECHHHHHHHH
T ss_pred HHHHHHHHcC-----------CCCEEEecccCCCCcccccccCCCcccccccccc-cccccccCCC-CCcccHHHHHHHH
Confidence 9877666654 6777765444 3555432 223334311 3444555643 5799999999988
Q ss_pred HHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCC
Q 037144 225 NLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLF 304 (502)
Q Consensus 225 ~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~ 304 (502)
.+.+ |.+|++ |.+..-..-|++++.+||++.|++|++|.||-++......+...+. .||++|.+.||+|.
T Consensus 200 ~~~k-----PklIi~--G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~---~ADvVTtTTHKTLr 269 (490)
T 3ou5_A 200 RLFR-----PRLIIA--GTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK---HADIVTTTTHKTLR 269 (490)
T ss_dssp HHHC-----CSEEEE--CCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG---TCSEEEEESSSTTC
T ss_pred hhcC-----CCeEEE--CCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccc---cceEEecccccccc
Confidence 7753 666665 3445556678999999999999999999999777665443333333 79999999999999
Q ss_pred CCCcceEEEeeCchhhhhh-hcCCcccccCccCCCCCcccccCCC-cccccCCCCCCch-HHHHHHHHhcHHHHHHHHHH
Q 037144 305 TTLDCCCLWVKDPSCLLST-LSTNPQYLKNEATDQEPKEQEVGYK-DWQITLCRRFRSL-KLWVVIRNFGVANLRNFIRS 381 (502)
Q Consensus 305 ~p~~~g~~~~r~~~~l~~~-~~~~~~yl~~~~~~~~~~~~~~~~~-~~~~~~sr~~~al-~~~~~l~~~g~~g~~~~~~~ 381 (502)
+|. .|++++++...-.+. ......|-.. ..++.. -.+++++-....+ +...+++..-...+.+..++
T Consensus 270 GPr-GG~Il~~~~~~~~~~k~~~~~~~~~~---------kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~q 339 (490)
T 3ou5_A 270 GAR-SGLIFYRKGVKAVDPKTGREIPYTFE---------DRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQ 339 (490)
T ss_dssp SCS-CEEEEEECSEEEECC--CCEEECCCH---------HHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCC-ceEEEeccccccccccccchhHHHHH---------HHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHH
Confidence 996 677777763110000 0000000000 000000 0022222222222 22333443334567888999
Q ss_pred HHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCc
Q 037144 382 HVGMAKLFERLVTSDKRFEVAFP-RNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGK 460 (502)
Q Consensus 382 ~~~la~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 460 (502)
..++|+.|.+.|.+. |+.++.- ....++.+.+.+.++. . ++..+.|.+.|+
T Consensus 340 Vv~NAkaLA~~L~~~-G~~vvsGgTdnHlvLvDl~~~g~t------------------------G---~~ae~~Le~agI 391 (490)
T 3ou5_A 340 VLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKGLD------------------------G---ARAERVLELVSI 391 (490)
T ss_dssp HHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTCC------------------------H---HHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHhC-CCeeecCCCCceEEEEeccccCCC------------------------H---HHHHHHHHHcCc
Confidence 999999999999987 8999852 3345666666554321 1 122233333465
Q ss_pred EEEEeeeEC-----CEEEEEEEec---CCCCcHHHHHHHHHHHHHHH
Q 037144 461 VFMTHAIVG-----GIYVLRFAAG---NSMTMESHVRAAWTVVQEHL 499 (502)
Q Consensus 461 ~~~~~~~~~-----g~~~lR~~~~---~~~t~~~di~~~~~~l~~~~ 499 (502)
..-.-+... ....||+... ...-.++|++++.+.|.+++
T Consensus 392 tvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l 438 (490)
T 3ou5_A 392 TANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGV 438 (490)
T ss_dssp ECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 322111111 1236899863 23356678888888877654
No 231
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.54 E-value=6.8e-14 Score=142.64 Aligned_cols=328 Identities=10% Similarity=-0.010 Sum_probs=191.6
Q ss_pred HHHHHHHhhcCCCC-cccccChhhHHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCc
Q 037144 92 IVGEMLSSGFNVVG-LDWISSPAAVELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGR 170 (502)
Q Consensus 92 ~~~~~l~~~~n~~~-~~~~~~p~~~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (502)
.+.++....+..+. ..|....+..++.+.+.+++ +|-.... +.-..+-|.|||.|+..++......+.
T Consensus 66 ~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~---~g~~~~~---~~~~~~qt~ggtga~~~a~~~l~~~~~----- 134 (420)
T 4h51_A 66 VVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKII---YGNTVEL---ENLVAVQTLSGTGAVSLGAKLLTRVFD----- 134 (420)
T ss_dssp HHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHH---HC---CG---GGEEEEEEEHHHHHHHHHHHHHTTTSC-----
T ss_pred HHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHh---cCCCccc---cccceeeecCchHHHHHHHHHHHHhcC-----
Confidence 34444444443333 35877788888988887765 3321110 001345588899888776655433211
Q ss_pred cCCCCeEEEeCCCCchhHHHHHHHcCCCCCCE-EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 171 ENISKLVVYSSDQTHCAFQKAAQIVGIDRKNI-RAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v-~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
.+++.|+++++++.+.....+..|. .. ...+....+++.+|.+.+.+.+....+ ...+++.+.++|+||..
T Consensus 135 --~pgd~V~ip~P~w~~y~~i~~~aG~---~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~~vll~~~p~NPtG~~ 206 (420)
T 4h51_A 135 --AETTPIYLSDPTWPNHYGVVKAAGW---KNICTYAYYDPKTVSLNFEGMKKDILAAPD---GSVFILHQCAHNPTGVD 206 (420)
T ss_dssp --TTTSCEEEEESCCTHHHHHHHHTTC---CCEEEEECEEGGGTEECHHHHHHHHHHSCS---SCEEEEESSSCTTTCCC
T ss_pred --CCCCEEEEecCCchhHHHHHHHcCC---eEEEeeccccccccCCCHHHHHHHHhccCC---CcEEEEeCCCCCCCCCC
Confidence 1678899999999999999999998 64 444443334578899999998876432 24567778899999998
Q ss_pred ---CChhHHHHHHHHhCCEEEeecccccccccCccchh---h-hcCCCCCCeeEEccCCcCCC-CCcceEEEeeCchh--
Q 037144 250 ---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRH---F-IDGVECVDSFSFNPHKWLFT-TLDCCCLWVKDPSC-- 319 (502)
Q Consensus 250 ---dpl~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~---~-~~~~~~aDsi~~~~hK~l~~-p~~~g~~~~r~~~~-- 319 (502)
+.+++|+++|++++++++.|.+|.++......... + ......--.++.++.|.++. ...+|++.+.....
T Consensus 207 ~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~ 286 (420)
T 4h51_A 207 PSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTK 286 (420)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHH
T ss_pred CCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHH
Confidence 56889999999999999999999876543211110 0 00000112455679998764 46688877654421
Q ss_pred hhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHHHHHHHhc--------HHHHHHHHHHHHHHHHHHHH
Q 037144 320 LLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFG--------VANLRNFIRSHVGMAKLFER 391 (502)
Q Consensus 320 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~la~~l~~ 391 (502)
........ ..+.... .+ ...+.....+...+. .+-+..+.+++.++++.|.+
T Consensus 287 ~~~~~~~l-~~~~r~~------------------~s-~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~ 346 (420)
T 4h51_A 287 RADVKSVM-DSLIREE------------------YT-CPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYD 346 (420)
T ss_dssp HHHHHHHH-HHHHHTT------------------TS-SCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHhhhcc------------------cC-cchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11000000 0000000 00 001122222222221 23456677788889999999
Q ss_pred HHhcCC--C-eEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeE
Q 037144 392 LVTSDK--R-FEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIV 468 (502)
Q Consensus 392 ~l~~~~--~-~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~ 468 (502)
.|++.. + |..+ +++.++++|. +.. .+.++.|.+.|+ ++.+
T Consensus 347 ~L~~~g~~~~~~~i-~~q~GmF~~~--gls------------------------------~e~v~~L~e~~V-y~~~--- 389 (420)
T 4h51_A 347 ELLRLQTPGSWEHV-INQIGMFSFL--GLS------------------------------KAQCEYCQNHNI-FITV--- 389 (420)
T ss_dssp HHHHTTCSSCCTHH-HHCCSSEEEC--CCC------------------------------HHHHHHHHHTTE-ECCT---
T ss_pred HHHHhCCCCCCCee-cCCCceEEec--CcC------------------------------HHHHHHHHhCCE-EEcC---
Confidence 998762 1 2222 2344666652 211 112344545564 4433
Q ss_pred CCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 469 GGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 469 ~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.| |||+++ .+++.|+++.++|.++.++
T Consensus 390 ~g----Ris~Ag--l~~~ni~~~a~aI~~vvr~ 416 (420)
T 4h51_A 390 SG----RANMAG--LTHETALMLAQTINDAVRN 416 (420)
T ss_dssp TC----EEEGGG--CCHHHHHHHHHHHHHHHC-
T ss_pred CC----EEEecc--CCHHHHHHHHHHHHHHHHH
Confidence 12 999875 3667999999999998764
No 232
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.47 E-value=6.4e-12 Score=128.79 Aligned_cols=307 Identities=10% Similarity=0.012 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G 196 (502)
+|.++.+.+++++.-.+ ...|++||||||..|+..||... . +..+|......|-...-.....+
T Consensus 128 ~~~~lae~l~~~~p~~~--------~v~f~~SGsEA~e~AiklAr~~t-g-------r~~ii~~~~~yHG~t~~~~~~~~ 191 (454)
T 4ao9_A 128 LEGRLARLICERFPQIE--------QLRFTNSGTEANLMALTAALHFT-G-------RRKIVVFSGGYHGGVLGFGARPS 191 (454)
T ss_dssp SHHHHHHHHHHHSTTCS--------EEEEESSHHHHHHHHHHHHHHHH-T-------CCEEEEETTCBCSTTCBBSSSBC
T ss_pred HHHHHHHHHHHhCCCCC--------EEEEeCchHHHHHHHHHHHHhcc-c-------CCeEEEEeCCcCCcccccccccc
Confidence 44556677777774322 57999999999999999998753 1 23344444445543211100011
Q ss_pred CC--CCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCEEEeec
Q 037144 197 ID--RKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWVHVDA 270 (502)
Q Consensus 197 lg--~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~lhVDa 270 (502)
-. ......+|. -|++.+++.|++... ...+|++.......|.+-| |++|.++|++||++|++|.
T Consensus 192 ~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~---~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DE 261 (454)
T 4ao9_A 192 PTTVPFDFLVLPY-------NDAQTARAQIERHGP---EIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDE 261 (454)
T ss_dssp TTSCCSEEEEECT-------TCHHHHHHHHHHTGG---GEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CccCCCCcccCCC-------chHHHHHHHHhhcCC---ceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEEC
Confidence 00 002233332 388999999976432 2456777665666788877 9999999999999999999
Q ss_pred ccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcc
Q 037144 271 AYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDW 350 (502)
Q Consensus 271 A~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 350 (502)
++.| .....+..-..|+ ..|.+|++ |.++..++.|.+..++. . .+.+......+....
T Consensus 262 V~tG--R~G~~~a~e~~gv-~PDi~t~g--K~lggG~Piga~~~~~e-i-~~~~~~~~~~~~h~~--------------- 319 (454)
T 4ao9_A 262 VMTS--RLAPHGLANKLGI-RSDLTTLG--KYIGGGMSFGAFGGRAD-V-MALFDPRTGPLAHSG--------------- 319 (454)
T ss_dssp TTGG--GGSTTCHHHHHTC-CCSEEEEE--GGGGTTSSCEEEEECHH-H-HGGGCTTTCSCCCCC---------------
T ss_pred CCcC--CCccccchhccCC-CCcEEEec--cccCCCCcceeeeeHHH-H-HHHHhhccCCccccC---------------
Confidence 9864 2222222222244 57888876 88876677888887644 2 233322111111100
Q ss_pred cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CC-eEEecCCCeeEEEEEeecCcchhhhhh
Q 037144 351 QITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KR-FEVAFPRNFSLVCFRVTPSAVMDKLRT 425 (502)
Q Consensus 351 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~-~~l~~~~~~~~v~f~~~~~~~~~~~~~ 425 (502)
|+ .+.+..+.+..++|+.+-.+ +..++..++.++|+++|+++ +- .++-+ ...++.+.+.......
T Consensus 320 T~-~gnPla~AAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg--~G~m~gi~f~~~~~~~---- 389 (454)
T 4ao9_A 320 TF-NNNVMTMAAGYAGLTKLFTP---EAAGALAERGEALRARLNALCANEGVAMQFTG--IGSLMNAHFVQGDVRS---- 389 (454)
T ss_dssp TT-TTCHHHHHHHHHHHHHTSCH---HHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEE--ETTEEEEESCCSCCCS----
T ss_pred CC-CCCHHHHHHHHHHHHHHhcc---ChhHHHHHHHHHHHHHHHHHHhhCCCCEEEee--eceEEEEEEecCCCCC----
Confidence 11 11111223334455555433 34556666777777776542 21 11211 1224444443221100
Q ss_pred cccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHh
Q 037144 426 KYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEA 501 (502)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~ 501 (502)
.. . ......++...+...+.++|.+ +.+. + .+. +.-++ |++|||+++++|++++.+
T Consensus 390 ------~~----~-~~~~d~~~~~~~~~~ll~~Gv~-~~p~---~--~~~--~s~~~-T~~dId~~l~al~~~l~~ 445 (454)
T 4ao9_A 390 ------SE----D-LAAVDGRLRQLLFFHLLNEDIY-SSPR---G--FVV--LSLPL-TDADIDRYVAAIGSFIGG 445 (454)
T ss_dssp ------GG----G-GTTCCHHHHHHHHHHHHHTTEE-CCTT---C--EEE--CCTTC-CHHHHHHHHHHHHHHHHH
T ss_pred ------HH----H-HHhhhHHHHHHHHHHHHHCCEE-EcCC---C--CEE--EeCCC-CHHHHHHHHHHHHHHHHh
Confidence 00 0 0000133456677788888853 3331 1 222 33333 567999999999998765
No 233
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.15 E-value=1.1e-14 Score=150.09 Aligned_cols=307 Identities=9% Similarity=-0.018 Sum_probs=166.0
Q ss_pred HHHHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCC-CCchhHHHHH-
Q 037144 115 VELENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSD-QTHCAFQKAA- 192 (502)
Q Consensus 115 ~~le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~-~~H~s~~~aa- 192 (502)
.+.+.++.+.|+++++ ..+ ..+|++|||+||..|+.++|... ++..|++.+ ..|.+...+.
T Consensus 139 ~~~~~~Lae~L~~~~p-~~~-------~v~~~nSGseA~~~Aik~ar~~t---------gr~~ii~~~~~yHG~~~~~~s 201 (465)
T 2yky_A 139 TENEALFAEAVCDRFP-SID-------LVRFTNSGTEANLMALATATAIT---------GRKTVLAFDGGYHGGLLNFAS 201 (465)
Confidence 4455566677778774 112 47899999999999999887431 233444444 4454333322
Q ss_pred --HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hhHHHHHHHHhCCEE
Q 037144 193 --QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LKPLCDVAKQFGIWV 266 (502)
Q Consensus 193 --~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~eI~~i~~~~g~~l 266 (502)
...|+.. .++.+|. -|+++|+++|++.. ..+.+|++....+++|.+-| +++|.++|++||++|
T Consensus 202 g~~~~g~~~-~~~~~~~-------~d~~~l~~~l~~~~---~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~ll 270 (465)
T 2yky_A 202 GHAPTNAPY-HVVLGVY-------NDVEGTADLLKRHG---HDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALL 270 (465)
Confidence 1122211 1222221 37899999997421 12336666655556897766 999999999999999
Q ss_pred EeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcC---CcccccCccCCCCCccc
Q 037144 267 HVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLST---NPQYLKNEATDQEPKEQ 343 (502)
Q Consensus 267 hVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~---~~~yl~~~~~~~~~~~~ 343 (502)
++|.+|. + ...+....-..++ ..|.++ +.|+++.+...|+++.++. .. +.+.. .+-+...
T Consensus 271 I~DEv~~-~-r~g~~~a~~~~gv-~pDi~t--~sK~lg~G~piG~v~~~~~-i~-~~l~~~~~g~~~~~~---------- 333 (465)
T 2yky_A 271 IFDEVMT-S-RLSGGGAQEMLGI-SADLTT--LGKYIGGGMSFGAFGGRRD-LM-ERFDPARDGAFAHAG---------- 333 (465)
Confidence 9999998 4 2211110001122 356665 5699987777888776543 21 22211 0001100
Q ss_pred ccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEe--cCCCeeEEEEEeecCcch
Q 037144 344 EVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSDK-RFEVA--FPRNFSLVCFRVTPSAVM 420 (502)
Q Consensus 344 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~~-~~~l~--~~~~~~~v~f~~~~~~~~ 420 (502)
++ ++.+....+..++++.+..+ .+.++..++.++|+++|+++- .+.+. .+....++.|.+......
T Consensus 334 -------T~-~~npla~aAa~aaL~~l~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~ 402 (465)
T 2yky_A 334 -------TF-NNNILTMSAGHAALTQIYTR---QAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIR 402 (465)
Confidence 11 11122223333445544332 466777888888888887641 12221 123344566655321100
Q ss_pred hhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 037144 421 DKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLE 500 (502)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~ 500 (502)
.. ........+...++.+++.++|.++.+.. +. . +++ ..+++||++++++|.++.+
T Consensus 403 ~~---------------~~~~~~d~~~~~~~~~~ll~~GV~v~p~~-~~---~--~s~---~~t~edid~~l~~l~~~l~ 458 (465)
T 2yky_A 403 SA---------------GDVRAADQQLKELFFFHMLRKGIYLAPRG-MY---A--LSL---EIADAGRDAFAEALADFIG 458 (465)
Confidence 00 00000001234567778888887543332 21 1 333 3466799999999988765
Q ss_pred h
Q 037144 501 A 501 (502)
Q Consensus 501 ~ 501 (502)
+
T Consensus 459 ~ 459 (465)
T 2yky_A 459 E 459 (465)
Confidence 4
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.42 E-value=3.8e-10 Score=116.03 Aligned_cols=318 Identities=13% Similarity=0.041 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEE-eCCCCchhHHHHHHHc
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVY-SSDQTHCAFQKAAQIV 195 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~aa~~~ 195 (502)
.+.++.+.|.+++..+.. ...+|++||||||..|+..||... ++..|+ .....|-...-+....
T Consensus 108 ~~~~lae~L~~~~p~~~~------~~v~f~~sGsEA~e~AlklAr~~t---------~r~~ii~~~~~yHG~t~~als~t 172 (456)
T 4atq_A 108 GYVAVTEQLNRLTPGDHA------KRTVLFNSGAEAVENAVKVARLAT---------GRDAVVAFDHAYHGRTNLTMALT 172 (456)
T ss_dssp HHHHHHHHHHHHSSCSSC------EEEEEESSHHHHHHHHHHHHHHHH---------CCCEEEEETTCCCCSSHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCC------cEEEEeCChHHHHHHHHHHHhhhh---------cCCeEEEEecccCCccccccccc
Confidence 334566778888743321 147899999999999999998753 233344 4444564433333333
Q ss_pred CCC----------CCCEEEEecCCC----CCcccCHHHHHHHHHHHHh--cCCccEEEEEecCCccccccCC----hhHH
Q 037144 196 GID----------RKNIRAIKTTKS----SSYGLSAESVLSQINLDVE--AELIPLFLCATVGTTAITAVDP----LKPL 255 (502)
Q Consensus 196 Glg----------~~~v~~v~~~~~----~~~~~d~~~Le~~i~~~~~--~g~~p~~Vv~t~gtt~~G~idp----l~eI 255 (502)
|-. ...+..+|.... ....-+.+.+++.++...+ .+..+.+|++--.....|.+-| +++|
T Consensus 173 ~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~l 252 (456)
T 4atq_A 173 AKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPAL 252 (456)
T ss_dssp CCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHH
T ss_pred cCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHH
Confidence 221 124666765320 0112345566655543221 2334566777655555677744 9999
Q ss_pred HHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCCCcceEEEeeCchhhhhhhcCCcccccCcc
Q 037144 256 CDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTTLDCCCLWVKDPSCLLSTLSTNPQYLKNEA 335 (502)
Q Consensus 256 ~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p~~~g~~~~r~~~~l~~~~~~~~~yl~~~~ 335 (502)
.++|++||+.|++|.++.|+.....-+..-.-++ ..|.++++ |.++..+..|.++.+++. .+.+. +....+
T Consensus 253 r~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~g--K~lggg~P~~av~~~~~i--~~~~~--~~~~~~-- 323 (456)
T 4atq_A 253 SEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGV-VPDIITMA--KGIAGGLPLSAITGRADL--LDAVH--PGGLGG-- 323 (456)
T ss_dssp HHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEEC--GGGGTTSSCEEEEEEHHH--HTTSC--TTSSCC--
T ss_pred HHHHhhcCCceEecccccccCCccccccccccCC-CCchhhhh--hcccCcCCceeeEecHHH--Hhccc--ccCCCC--
Confidence 9999999999999999987644332222222244 58999887 777766778888887542 12221 111110
Q ss_pred CCCCCcccccCCCcccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CC--eEEecCCC--e
Q 037144 336 TDQEPKEQEVGYKDWQITLCRRFRSLKLWVVIRNFGVANLRNFIRSHVGMAKLFERLVTSD----KR--FEVAFPRN--F 407 (502)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~----~~--~~l~~~~~--~ 407 (502)
|+ .+.+..+.+..++++.+-+++ +.++..++.++|.++|+++ +. ..++...+ .
T Consensus 324 ---------------Tf-~gnpla~aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~G 384 (456)
T 4atq_A 324 ---------------TY-GGNPVACAAALAAIDTMEQHD---LNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRG 384 (456)
T ss_dssp ---------------SS-SSCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEET
T ss_pred ---------------CC-CCChHHHHhhHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecc
Confidence 11 111122233344444444443 4455566666666666542 21 11121111 1
Q ss_pred eEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHH
Q 037144 408 SLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESH 487 (502)
Q Consensus 408 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d 487 (502)
.++.+.+..+.. .+...++..++.+++.++|.++..... ...+||++.. ...++++
T Consensus 385 l~~giel~~~~~---------------------~~~~~~~~~~v~~~~~~~Gvl~~~~g~--~~~~irl~Pp-L~it~~~ 440 (456)
T 4atq_A 385 AMLAIELVQPGS---------------------KEPNAELTKAVAAACLKEGVIILTCGT--YGNVIRLLPP-LVISDEL 440 (456)
T ss_dssp TEEEEEEBCTTS---------------------CCBCHHHHHHHHHHHHHTTEECEEECT--TSCEEEECCC-TTCCHHH
T ss_pred eEEEEEEecCCC---------------------CCcCHHHHHHHHHHHHHCCCEEEecCC--CCCEEEEECC-CCCCHHH
Confidence 244454432210 000134567788888899975443322 2347898753 3467889
Q ss_pred HHHHHHHHHHHHHh
Q 037144 488 VRAAWTVVQEHLEA 501 (502)
Q Consensus 488 i~~~~~~l~~~~~~ 501 (502)
||++++.|.++++.
T Consensus 441 id~~l~~l~~al~a 454 (456)
T 4atq_A 441 LIDGLEVLAAAIKA 454 (456)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998775
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.29 E-value=1.3e-09 Score=112.45 Aligned_cols=326 Identities=9% Similarity=0.013 Sum_probs=174.9
Q ss_pred HHHHHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcC
Q 037144 117 LENIVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVG 196 (502)
Q Consensus 117 le~~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~G 196 (502)
.+.++.+.|.++...+-+ .++|++|||+||..|++.||.....+ +..+ +..+|-.....|-...-++...|
T Consensus 112 ~~~~lAe~L~~~~p~~~~-------~v~f~~sGsEA~e~AiKlAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~a~s~tg 182 (473)
T 4e3q_A 112 QTVMLSEKLVEVSPFDSG-------RVFYTNSGSEANDTMVKMLWFLHAAE-GKPQ-KRKILTRWNAYHGVTAVSASMTG 182 (473)
T ss_dssp HHHHHHHHHHHHSSCSSC-------EEEEESSHHHHHHHHHHHHHHHHHHT-TCTT-CCEEEEETTCCCCSSHHHHHHSC
T ss_pred HHHHHHHHHHhhCCCCcc-------EEEEeCchHHHHHHHHHHHHHHHHhc-CCCC-cceEEEeeceECCCccccccccc
Confidence 444567788888754432 58999999999999999998754332 2111 22233334445644444444332
Q ss_pred --------CCCCCEEEEecCC----CCCccc-------CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC----hh
Q 037144 197 --------IDRKNIRAIKTTK----SSSYGL-------SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP----LK 253 (502)
Q Consensus 197 --------lg~~~v~~v~~~~----~~~~~~-------d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp----l~ 253 (502)
.....+..++... ...+.. ..++|++.|.+.. ...+.+|++--.....|.+-| ++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~iAavi~EPiqg~gG~~~p~~~fl~ 260 (473)
T 4e3q_A 183 KPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREG--ADTIAGFFAEPVMGAGGVIPPAKGYFQ 260 (473)
T ss_dssp CGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCTTHHH
T ss_pred cccccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhC--CCceEEEEeCCccCCCCceeCCHHHHH
Confidence 2223455555421 000111 1344555554321 123456666655555677644 89
Q ss_pred HHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCeeEEccCCcCCCC-CcceEEEeeCchhhhhhhcCCccccc
Q 037144 254 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSFSFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLK 332 (502)
Q Consensus 254 eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~ 332 (502)
+|.++|++||+.|++|..+.|+.....-+..-..++ ..|.+++. |.++.. ++.|.++++++- . +.+........
T Consensus 261 ~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDi~t~~--K~l~gG~~Pl~av~~~~~i-~-~~~~~~~~~~~ 335 (473)
T 4e3q_A 261 AILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDF-TPDAIISS--KNLTAGFFPMGAVILGPEL-S-KRLETAIEAIE 335 (473)
T ss_dssp HHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTC-CCSEEEEC--GGGGTTSSCCEEEEECHHH-H-HHHHHHHHHHS
T ss_pred HHHHHhcccceEEeccCccccCCcccchhHHHhcCC-CCChHHhc--ccccCCCCCcccccccHHH-H-HHhcccccccc
Confidence 999999999999999999988644333222222344 58988876 888655 678888887542 1 22211100000
Q ss_pred CccCCCCCcccccCCCcccccCCCCCCchHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCC
Q 037144 333 NEATDQEPKEQEVGYKDWQITLCRRFRSLKLW---VVIRNFGVANLRNFIRSHVGMAKLFERLVTSD---KRFEVAFPRN 406 (502)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~la~~l~~~l~~~---~~~~l~~~~~ 406 (502)
... ...|+ ...++++. ++++.+-++ .++++..++.++|.++|+++ |.+.=+. -.
T Consensus 336 ~~~------------hg~T~----~Gnpla~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vR-G~ 395 (473)
T 4e3q_A 336 EFP------------HGFTA----SGHPVGCAIALKAIDVVMNE---GLAENVRRLAPRFEERLKHIAERPNIGEYR-GI 395 (473)
T ss_dssp CCC------------CCCTT----TTCHHHHHHHHHHHHHHHHS---SHHHHHHHHHHHHHHHHHHHTTSTTEEEEE-EE
T ss_pred ccc------------cCCCC----CCCcchhhhhhhhhhhhccc---cHHHHHHHHHHHHHHHHHHHhcCCCeeEEe-ec
Confidence 000 00010 11334333 444444333 34556667777887777653 3332110 01
Q ss_pred eeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHHHHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHH
Q 037144 407 FSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNEFNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMES 486 (502)
Q Consensus 407 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~ 486 (502)
..++.+.+....... . ..........++.+.+.++|.+..+. | ..+|++.. ...+++
T Consensus 396 Gl~~gielv~~~~~~---------------~--~~~~~~~~~~~~~~~~~~~Gll~~~~----g-~~i~l~PP-L~it~~ 452 (473)
T 4e3q_A 396 GFMWALEAVKDKASK---------------T--PFDGNLSVSERIANTCTDLGLICRPL----G-QSVVLCPP-FILTEA 452 (473)
T ss_dssp TTEEEEEECSBTTTT---------------B--CCCGGGCHHHHHHHHHHHTTEECEEE----T-TEEEECCC-TTCCHH
T ss_pred ceEEEEEEecCcccc---------------c--cccccHHHHHHHHHHHHHCCcEEEec----C-CEEEEeCC-CCCCHH
Confidence 123444443211000 0 00001223557788888889653222 2 36888742 446788
Q ss_pred HHHHHHHHHHHHHHh
Q 037144 487 HVRAAWTVVQEHLEA 501 (502)
Q Consensus 487 di~~~~~~l~~~~~~ 501 (502)
+||++++.+.+++++
T Consensus 453 eid~~~~~l~~al~~ 467 (473)
T 4e3q_A 453 QMDEMFDKLEKALDK 467 (473)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999998887654
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.18 E-value=1e-09 Score=120.81 Aligned_cols=328 Identities=13% Similarity=0.030 Sum_probs=166.1
Q ss_pred HHHHHHHHhcCCCCccCcCCCCcEEEcCCchHHHHHHHHHHHHHHHHHhCccC------CCCe-EEEeCCCCchhHHHHH
Q 037144 120 IVMDWLGQMLDLPKSFLFSGNGGGVIQGTTCEALLCTLTAARDRVLKKIGREN------ISKL-VVYSSDQTHCAFQKAA 192 (502)
Q Consensus 120 ~~~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~------~~~~-~v~~s~~~H~s~~~aa 192 (502)
++.+.|+++++-+.- ..++|++|||+||-.|+..|+.++..+.|..+ .++. +|......|-+..-++
T Consensus 428 ~Lae~L~~~~p~~~l------~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gal 501 (831)
T 4a0g_A 428 KCAELLLDGVGKGWA------SRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAM 501 (831)
T ss_dssp HHHHHHHHTTTTTTC------CEEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHH
T ss_pred HHHHHHHHhCCCCCC------CEEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeee
Confidence 455667777653210 15899999999999999999543333222210 0233 4444555677777777
Q ss_pred HHcCCCC-------------------------CCEEEEecCCC------CC-cccC------------------HHHHHH
Q 037144 193 QIVGIDR-------------------------KNIRAIKTTKS------SS-YGLS------------------AESVLS 222 (502)
Q Consensus 193 ~~~Glg~-------------------------~~v~~v~~~~~------~~-~~~d------------------~~~Le~ 222 (502)
...|... ..+..++.... +. -.-+ .++|++
T Consensus 502 s~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 581 (831)
T 4a0g_A 502 EAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSK 581 (831)
T ss_dssp HTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHH
T ss_pred eccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHH
Confidence 7665310 01122332210 00 0001 256777
Q ss_pred HHHHHH--hcCCccEEEEEecC-CccccccCC----hhHHHHHHHHhCCEEEeecccccccccCccchhhhcCCCCCCee
Q 037144 223 QINLDV--EAELIPLFLCATVG-TTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVECVDSF 295 (502)
Q Consensus 223 ~i~~~~--~~g~~p~~Vv~t~g-tt~~G~idp----l~eI~~i~~~~g~~lhVDaA~g~~~~~~~~~~~~~~~~~~aDsi 295 (502)
.|++.. ..+..+.+|++-.. ....|.+-| +++|.++|++||+++++|.++.|+......+..-..++ ..|.+
T Consensus 582 ~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDii 660 (831)
T 4a0g_A 582 HLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGC-KPDIA 660 (831)
T ss_dssp HC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSS-CCSEE
T ss_pred HHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCC-CCcEE
Confidence 765421 11233455555543 455666654 99999999999999999999877533322221111234 57888
Q ss_pred EEccCCcCCCC-CcceEEEeeCchhhhhhhcCCcccccCccCCCCCcccccCCCcccccCCCCCCchHHH---HHHHHhc
Q 037144 296 SFNPHKWLFTT-LDCCCLWVKDPSCLLSTLSTNPQYLKNEATDQEPKEQEVGYKDWQITLCRRFRSLKLW---VVIRNFG 371 (502)
Q Consensus 296 ~~~~hK~l~~p-~~~g~~~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g 371 (502)
|++ |.++.. ...|++++++. +.+.+...... . .+....+....++.+. ++++.+.
T Consensus 661 tls--K~L~gG~~Plgav~~~~~--i~~~~~~~~~~-~----------------~~~hg~T~~g~Pla~Aaala~L~~i~ 719 (831)
T 4a0g_A 661 CFA--KLLTGGMVPLAVTLATDA--VFDSFSGDSKL-K----------------ALLHGHSYSAHAMGCATAAKAIQWFK 719 (831)
T ss_dssp EEC--GGGGTTSSCCEEEEECHH--HHHTTCSSCGG-G----------------SCCCCCTTTTCHHHHHHHHHHHHHHH
T ss_pred EEe--cccccCccCcEEEEECHH--HHHHHhccccc-c----------------cceeecCCcccHHHHHHHHHHHHHHH
Confidence 755 988665 36788887644 22333221100 0 0000011111333333 3444432
Q ss_pred HHHHHHHHHHH-HHH----HHHHHHHHhcCCCeEEecCCCeeEEEEEeecCcchhhhhhcccCCCcccccccchhHhhHH
Q 037144 372 VANLRNFIRSH-VGM----AKLFERLVTSDKRFEVAFPRNFSLVCFRVTPSAVMDKLRTKYKNGTYDQYRQFSEEERTNE 446 (502)
Q Consensus 372 ~~g~~~~~~~~-~~l----a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (502)
.+.+.+.+.+. ..+ .+.+.+.+.+.|.+.-+. ....++.+.+...... . .....
T Consensus 720 ~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vr-g~Gl~~~iel~~~~~~-------------------~-~~~~~ 778 (831)
T 4a0g_A 720 DPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVV-VIGTLFALELKADASN-------------------S-GYASL 778 (831)
T ss_dssp CTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEE-EETTEEEEEEC-----------------------------CH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEe-ecccEEEEEEecCccc-------------------c-ccchH
Confidence 22221111110 111 223445566666654432 2223455555322100 0 00012
Q ss_pred HHHHHHHHHHhcCcEEEEeeeECCEEEEEEEecCCCCcHHHHHHHHHHHHHHHHhC
Q 037144 447 FNRELLESINVSGKVFMTHAIVGGIYVLRFAAGNSMTMESHVRAAWTVVQEHLEAF 502 (502)
Q Consensus 447 ~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~~~~~l~~~~~~~ 502 (502)
...++.+.+.++|.++ .+. + ..||++.. +..+++||+++++.|.++.+++
T Consensus 779 ~a~~~~~~l~e~Gv~v-~p~---g-~~lrl~pp-~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 779 YAKSLLIMLREDGIFT-RPL---G-NVIYLMCG-PCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp HHHHHHHHHHHTTEEC-CCB---T-TEEEEECC-TTCCHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHCCcEE-Eec---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 3456778888888643 322 2 58999864 4567889999999999887653
No 237
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=80.87 E-value=12 Score=34.42 Aligned_cols=68 Identities=7% Similarity=-0.026 Sum_probs=43.1
Q ss_pred CeEEEeCCCCchhHHHHHH---HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 175 KLVVYSSDQTHCAFQKAAQ---IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 175 ~~~v~~s~~~H~s~~~aa~---~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
+..|++.........+.++ ..|. ++..+++| --|.+++++.+++..++..++-++|-++|....+.+.
T Consensus 33 Ga~Vvi~~~~~~~~~~~~~~l~~~g~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~ 103 (255)
T 4g81_D 33 GARVILNDIRATLLAESVDTLTRKGY---DAHGVAFD-----VTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMV 103 (255)
T ss_dssp TCEEEECCSCHHHHHHHHHHHHHTTC---CEEECCCC-----TTCHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGG
T ss_pred CCEEEEEECCHHHHHHHHHHHHhcCC---cEEEEEee-----CCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCChh
Confidence 4445555444333444333 3355 88888887 3488999999988776654555777788876666553
No 238
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=78.62 E-value=10 Score=35.26 Aligned_cols=70 Identities=9% Similarity=0.016 Sum_probs=44.4
Q ss_pred CeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCCh
Q 037144 175 KLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPL 252 (502)
Q Consensus 175 ~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl 252 (502)
+..|++..-.--...+.++.+|- ++..+++| .-|.+++++.+++..++-.++-++|-++|....+.+.++
T Consensus 53 Ga~V~i~~r~~~~l~~~~~~~g~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~ 122 (273)
T 4fgs_A 53 GARVFITGRRKDVLDAAIAEIGG---GAVGIQAD-----SANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEV 122 (273)
T ss_dssp TCEEEEEESCHHHHHHHHHHHCT---TCEEEECC-----TTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSC
T ss_pred CCEEEEEECCHHHHHHHHHHcCC---CeEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhc
Confidence 33344443344456666777776 88888887 347888888887765443334567777887666665443
No 239
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=65.03 E-value=36 Score=31.11 Aligned_cols=67 Identities=10% Similarity=-0.016 Sum_probs=37.9
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP 251 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp 251 (502)
.|++.........+.++.+|. ++..+.+|- -|.+.+++++++..+....+-+|+-++|....+.+.+
T Consensus 53 ~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~ 119 (266)
T 3grp_A 53 IVGLHGTREDKLKEIAADLGK---DVFVFSANL-----SDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVR 119 (266)
T ss_dssp EEEEEESCHHHHHHHHHHHCS---SEEEEECCT-----TSHHHHHHHHHHHHHHHTSCCEEEECCCCC-----CC
T ss_pred EEEEEeCCHHHHHHHHHHhCC---ceEEEEeec-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCccc
Confidence 343333333445555666676 888888873 4788888887765443223446777777665555433
No 240
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=62.20 E-value=41 Score=30.95 Aligned_cols=65 Identities=17% Similarity=0.046 Sum_probs=39.7
Q ss_pred EEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 178 VYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 178 v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
|++.........+.+..+|. ++..+++|- -|.+.+++++++..+....+-+++-++|....+.+.
T Consensus 54 V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~ 118 (277)
T 4dqx_A 54 VVVADVNEDAAVRVANEIGS---KAFGVRVDV-----SSAKDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVV 118 (277)
T ss_dssp EEEEESSHHHHHHHHHHHCT---TEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTT
T ss_pred EEEEeCCHHHHHHHHHHhCC---ceEEEEecC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcc
Confidence 33333334445555555666 888888873 478888888876544322344677777766555543
No 241
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=61.74 E-value=67 Score=28.72 Aligned_cols=72 Identities=15% Similarity=0.104 Sum_probs=49.6
Q ss_pred CCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChh
Q 037144 174 SKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLK 253 (502)
Q Consensus 174 ~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~ 253 (502)
++.-++.....-..+...++++|+ ++...... +.++++..+.+..++|.. +|+...
T Consensus 107 ~kIavVg~~~~~~~~~~i~~ll~~---~i~~~~~~-------~~ee~~~~i~~l~~~G~~--vVVG~~------------ 162 (225)
T 2pju_A 107 SSIGVVTYQETIPALVAFQKTFNL---RLDQRSYI-------TEEDARGQINELKANGTE--AVVGAG------------ 162 (225)
T ss_dssp SCEEEEEESSCCHHHHHHHHHHTC---CEEEEEES-------SHHHHHHHHHHHHHTTCC--EEEESH------------
T ss_pred CcEEEEeCchhhhHHHHHHHHhCC---ceEEEEeC-------CHHHHHHHHHHHHHCCCC--EEECCH------------
Confidence 344455445555677888899999 88888764 578889999888887743 344321
Q ss_pred HHHHHHHHhCCE-EEee
Q 037144 254 PLCDVAKQFGIW-VHVD 269 (502)
Q Consensus 254 eI~~i~~~~g~~-lhVD 269 (502)
-..++|+++|+. +.+.
T Consensus 163 ~~~~~A~~~Gl~~vlI~ 179 (225)
T 2pju_A 163 LITDLAEEAGMTGIFIY 179 (225)
T ss_dssp HHHHHHHHTTSEEEESS
T ss_pred HHHHHHHHcCCcEEEEC
Confidence 237889999986 3443
No 242
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=61.21 E-value=13 Score=32.63 Aligned_cols=53 Identities=15% Similarity=0.070 Sum_probs=41.9
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144 216 SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 216 d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV 268 (502)
..-+=|..++=.+-+|..|..|++..-.+..|....++++.++|++||+.++.
T Consensus 142 R~GHTEAavdLarLAGl~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 142 RRGHTEAAVQLSTLAGLQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp CCCHHHHHHHHHHHTTSCSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEE
T ss_pred CCCcHHHHHHHHHHcCCCceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 33445666666666888998888877657789999999999999999997753
No 243
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=60.42 E-value=36 Score=30.62 Aligned_cols=65 Identities=20% Similarity=0.029 Sum_probs=39.5
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
.|++.........+.+..+|. ++..+.+|- -|.+.+++++++..+.-..+-+++-++|....+.+
T Consensus 32 ~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 96 (247)
T 3rwb_A 32 TVIVSDINAEGAKAAAASIGK---KARAIAADI-----SDPGSVKALFAEIQALTGGIDILVNNASIVPFVAW 96 (247)
T ss_dssp EEEEECSCHHHHHHHHHHHCT---TEEECCCCT-----TCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCG
T ss_pred EEEEEeCCHHHHHHHHHHhCC---ceEEEEcCC-----CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCc
Confidence 344443344455555555666 888888873 47888888887654432234467777776655544
No 244
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=60.24 E-value=40 Score=31.03 Aligned_cols=65 Identities=18% Similarity=0.126 Sum_probs=39.3
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
.|++.........+.+..+|. ++..+++|- -|.+.+++++++..+.-..+-+++-++|....+.+
T Consensus 55 ~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 119 (277)
T 3gvc_A 55 HVLCADIDGDAADAAATKIGC---GAAACRVDV-----SDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASL 119 (277)
T ss_dssp EEEEEESSHHHHHHHHHHHCS---SCEEEECCT-----TCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCBCT
T ss_pred EEEEEeCCHHHHHHHHHHcCC---cceEEEecC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 344333333445555566666 788888873 47888888887654432234567777776655544
No 245
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=58.39 E-value=38 Score=26.34 Aligned_cols=73 Identities=10% Similarity=0.167 Sum_probs=46.8
Q ss_pred CCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC
Q 037144 174 SKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP 251 (502)
Q Consensus 174 ~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp 251 (502)
.+.+||......+| ..+..+.+|+ ....+.++.. -|..++++.+.+.......|.+++ +....|..|+
T Consensus 17 ~~v~vy~~~~Cp~C~~ak~~L~~~~i---~~~~~dvd~~----~~~~~~~~~l~~~~g~~tvP~vfi---~g~~igG~d~ 86 (114)
T 3h8q_A 17 SRVVIFSKSYCPHSTRVKELFSSLGV---ECNVLELDQV----DDGARVQEVLSEITNQKTVPNIFV---NKVHVGGCDQ 86 (114)
T ss_dssp CSEEEEECTTCHHHHHHHHHHHHTTC---CCEEEETTTS----TTHHHHHHHHHHHHSCCSSCEEEE---TTEEEESHHH
T ss_pred CCEEEEEcCCCCcHHHHHHHHHHcCC---CcEEEEecCC----CChHHHHHHHHHHhCCCccCEEEE---CCEEEeCHHH
Confidence 56778877767666 3445566788 8888888742 256677777766554445675544 3446677776
Q ss_pred hhHHH
Q 037144 252 LKPLC 256 (502)
Q Consensus 252 l~eI~ 256 (502)
+.++.
T Consensus 87 l~~l~ 91 (114)
T 3h8q_A 87 TFQAY 91 (114)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66553
No 246
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=58.08 E-value=53 Score=29.63 Aligned_cols=64 Identities=17% Similarity=0.070 Sum_probs=39.5
Q ss_pred EEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 178 VYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 178 v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
|++.........+.+..++- ++..+.+| --|.+.+++++++..+....+-+|+-++|....+.+
T Consensus 35 V~~~~r~~~~~~~~~~~~~~---~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~ 98 (259)
T 4e6p_A 35 VAIADIDIERARQAAAEIGP---AAYAVQMD-----VTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPI 98 (259)
T ss_dssp EEEEESCHHHHHHHHHHHCT---TEEEEECC-----TTCHHHHHHHHHHHHHHSSSCCEEEECCCCCCCBCG
T ss_pred EEEEeCCHHHHHHHHHHhCC---CceEEEee-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence 43333344445555566665 78888887 347888888887665443345567777776555443
No 247
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=57.54 E-value=34 Score=30.50 Aligned_cols=74 Identities=7% Similarity=0.066 Sum_probs=54.0
Q ss_pred hhHHHHHHH-cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc--CChhHHHHHHHHh
Q 037144 186 CAFQKAAQI-VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV--DPLKPLCDVAKQF 262 (502)
Q Consensus 186 ~s~~~aa~~-~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i--dpl~eI~~i~~~~ 262 (502)
.+++.++.+ ..+|...++++|.. |.-.+++|+..-+.+.++|. .+ -+||.| |.+++|.++|.+.
T Consensus 145 V~vetAiaml~dmG~~SvKffPm~----Gl~~l~E~~avAka~a~~g~-----~l----EPTGGIdl~N~~~I~~i~l~a 211 (249)
T 3m0z_A 145 VPLETAIALLKDMGGSSIKYFPMG----GLKHRAEFEAVAKACAAHDF-----WL----EPTGGIDLENYSEILKIALDA 211 (249)
T ss_dssp EEHHHHHHHHHHTTCCEEEECCCT----TTTTHHHHHHHHHHHHHTTC-----EE----EEBSSCCTTTHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHcCCCeeeEeecC----CcccHHHHHHHHHHHHHcCc-----eE----CCCCCccHhhHHHHHHHHHHc
Confidence 356666554 46666789999985 35588999998888888773 22 267777 6899999999999
Q ss_pred CCEEEeeccc
Q 037144 263 GIWVHVDAAY 272 (502)
Q Consensus 263 g~~lhVDaA~ 272 (502)
|+..++=-.|
T Consensus 212 Gv~~viPHIY 221 (249)
T 3m0z_A 212 GVSKIIPHIY 221 (249)
T ss_dssp TCSCBCCBCC
T ss_pred CCCeeccccc
Confidence 9876554334
No 248
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=56.12 E-value=40 Score=30.50 Aligned_cols=64 Identities=8% Similarity=0.097 Sum_probs=38.4
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++++ .......+..+.+|. ++..+++|- -|.+.+++.++...+....+-+++-++|....+.+
T Consensus 35 V~~~~-r~~~~~~~~~~~~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 98 (255)
T 4eso_A 35 VLLTG-RNESNIARIREEFGP---RVHALRSDI-----ADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPF 98 (255)
T ss_dssp EEEEE-SCHHHHHHHHHHHGG---GEEEEECCT-----TCHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCG
T ss_pred EEEEe-CCHHHHHHHHHHhCC---cceEEEccC-----CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCh
Confidence 44443 334455555555666 888888873 47888888776654432234567777776555443
No 249
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=55.68 E-value=81 Score=27.96 Aligned_cols=47 Identities=17% Similarity=0.092 Sum_probs=32.4
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
.|. ++..+.+|- -|.+.+++.+++..+....+-+|+-++|....+.+
T Consensus 52 ~~~---~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~ 98 (247)
T 3lyl_A 52 KGF---KARGLVLNI-----SDIESIQNFFAEIKAENLAIDILVNNAGITRDNLM 98 (247)
T ss_dssp TTC---CEEEEECCT-----TCHHHHHHHHHHHHHTTCCCSEEEECCCCCCCCCG
T ss_pred cCC---ceEEEEecC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCch
Confidence 365 888888873 47888988888765554445577777776655544
No 250
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=55.28 E-value=79 Score=28.78 Aligned_cols=67 Identities=12% Similarity=0.057 Sum_probs=39.0
Q ss_pred CeEEEeCCCCchhHHHHHHH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 175 KLVVYSSDQTHCAFQKAAQI---VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 175 ~~~v~~s~~~H~s~~~aa~~---~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+..|++.........+.++. .|. ++..+.+| --|.+.+++++++..+....+-+|+-++|....+.+
T Consensus 50 G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 119 (271)
T 4ibo_A 50 GARILINGTDPSRVAQTVQEFRNVGH---DAEAVAFD-----VTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPM 119 (271)
T ss_dssp TCEEEECCSCHHHHHHHHHHHHHTTC---CEEECCCC-----TTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCG
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCC---ceEEEEcC-----CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCc
Confidence 33444443333334443332 354 78888876 347888888887765544445567777776554443
No 251
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=54.08 E-value=26 Score=30.84 Aligned_cols=52 Identities=13% Similarity=0.091 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEec-CCccccccCChhHHHHHHHHhCCEEEe
Q 037144 217 AESVLSQINLDVEAELIPLFLCATV-GTTAITAVDPLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 217 ~~~Le~~i~~~~~~g~~p~~Vv~t~-gtt~~G~idpl~eI~~i~~~~g~~lhV 268 (502)
..+=|.+++=.+-+|..|..|++.. +.+..|.....+++.++|++||+.++.
T Consensus 142 ~GhTEaavdLarlAGl~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 142 PGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp CCHHHHHHHHHHHTTSCSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEE
T ss_pred CChHHHHHHHHHHcCCCceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 4456677776677899998888776 256789999999999999999998763
No 252
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=53.12 E-value=44 Score=29.75 Aligned_cols=64 Identities=19% Similarity=0.147 Sum_probs=35.3
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++++. .-....+..+.++- .+..+.+|- -|.+.+++++++..+....+-+++-++|....+.+
T Consensus 30 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 93 (235)
T 3l6e_A 30 VSMMGR-RYQRLQQQELLLGN---AVIGIVADL-----AHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPV 93 (235)
T ss_dssp EEEEES-CHHHHHHHHHHHGG---GEEEEECCT-----TSHHHHHHHHHHHHHHHCSCSEEEEECCCC-----
T ss_pred EEEEEC-CHHHHHHHHHHhcC---CceEEECCC-----CCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCh
Confidence 444443 33345555555554 688888873 37888888887654432234467777776555544
No 253
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=52.66 E-value=62 Score=29.47 Aligned_cols=44 Identities=14% Similarity=0.000 Sum_probs=28.6
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+|- -|.+.+++++++..+....+-+++-++|....+.+
T Consensus 54 ~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~ 97 (264)
T 3tfo_A 54 TALAQVLDV-----TDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPL 97 (264)
T ss_dssp EEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred cEEEEEcCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 788888763 47888888877654432234467777776655544
No 254
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=52.33 E-value=77 Score=27.54 Aligned_cols=67 Identities=12% Similarity=0.244 Sum_probs=43.8
Q ss_pred CeEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhH
Q 037144 175 KLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKP 254 (502)
Q Consensus 175 ~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~e 254 (502)
+.-++.....-......+.++|+ ++.....+ +.+++++.+.+..++|.. +|+... -
T Consensus 96 kIavvg~~~~~~~~~~~~~ll~~---~i~~~~~~-------~~~e~~~~i~~l~~~G~~--vvVG~~------------~ 151 (196)
T 2q5c_A 96 ELALIAYKHSIVDKHEIEAMLGV---KIKEFLFS-------SEDEITTLISKVKTENIK--IVVSGK------------T 151 (196)
T ss_dssp EEEEEEESSCSSCHHHHHHHHTC---EEEEEEEC-------SGGGHHHHHHHHHHTTCC--EEEECH------------H
T ss_pred cEEEEeCcchhhHHHHHHHHhCC---ceEEEEeC-------CHHHHHHHHHHHHHCCCe--EEECCH------------H
Confidence 33444444445567788899999 88888765 345667777777777743 344321 2
Q ss_pred HHHHHHHhCCE
Q 037144 255 LCDVAKQFGIW 265 (502)
Q Consensus 255 I~~i~~~~g~~ 265 (502)
..++|+++|+.
T Consensus 152 ~~~~A~~~Gl~ 162 (196)
T 2q5c_A 152 VTDEAIKQGLY 162 (196)
T ss_dssp HHHHHHHTTCE
T ss_pred HHHHHHHcCCc
Confidence 37889999986
No 255
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=52.03 E-value=71 Score=28.68 Aligned_cols=43 Identities=14% Similarity=0.010 Sum_probs=29.8
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+++|- -|.+.++++++...+. ..+-+++-++|....+.+
T Consensus 57 ~~~~~~~Dv-----~~~~~v~~~~~~~~~~-g~id~lv~nAg~~~~~~~ 99 (252)
T 3h7a_A 57 RIVARSLDA-----RNEDEVTAFLNAADAH-APLEVTIFNVGANVNFPI 99 (252)
T ss_dssp EEEEEECCT-----TCHHHHHHHHHHHHHH-SCEEEEEECCCCCCCCCG
T ss_pred eEEEEECcC-----CCHHHHHHHHHHHHhh-CCceEEEECCCcCCCCCc
Confidence 788888873 4788888888776555 345567777776555544
No 256
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=51.18 E-value=90 Score=28.01 Aligned_cols=67 Identities=13% Similarity=0.006 Sum_probs=36.1
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++++. ......+....+.-...++..+.+|- -|.+.+++++++..+....+-+++-++|....+.+
T Consensus 33 V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 99 (257)
T 3imf_A 33 VVITGR-TKEKLEEAKLEIEQFPGQILTVQMDV-----RNTDDIQKMIEQIDEKFGRIDILINNAAGNFICPA 99 (257)
T ss_dssp EEEEES-CHHHHHHHHHHHCCSTTCEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred EEEEeC-CHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 444433 33344444443322122788888873 47888888887654432234467777775544433
No 257
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=50.86 E-value=1.1e+02 Score=27.30 Aligned_cols=64 Identities=14% Similarity=-0.026 Sum_probs=36.3
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+++++. .-....+.++.+|. ++..+.+|- -|.+.++++++...+.-..+-+|+-++|....+.+
T Consensus 33 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~ 96 (253)
T 1hxh_A 33 VAFSDI-NEAAGQQLAAELGE---RSMFVRHDV-----SSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDM 96 (253)
T ss_dssp EEEECS-CHHHHHHHHHHHCT---TEEEECCCT-----TCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCBCT
T ss_pred EEEEeC-CHHHHHHHHHHcCC---ceEEEEccC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 444443 32334444444555 788888763 47888888887654332234467777776554443
No 258
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=50.40 E-value=20 Score=32.37 Aligned_cols=73 Identities=8% Similarity=0.116 Sum_probs=52.4
Q ss_pred hHHHHHHHc-CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc--CChhHHHHHHHHhC
Q 037144 187 AFQKAAQIV-GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV--DPLKPLCDVAKQFG 263 (502)
Q Consensus 187 s~~~aa~~~-Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i--dpl~eI~~i~~~~g 263 (502)
+++.++.++ .+|...+++.|.. |.-.+++|+..-+.+.++|. .+ -+||.| |.+++|.++|.+.|
T Consensus 169 ~vetAiaml~dmG~~SvKffPM~----Gl~~leEl~avAkAca~~g~-----~l----EPTGGIdl~Nf~~I~~i~l~aG 235 (275)
T 3m6y_A 169 PIKTAIALVRDMGGNSLKYFPMK----GLAHEEEYRAVAKACAEEGF-----AL----EPTGGIDKENFETIVRIALEAN 235 (275)
T ss_dssp EHHHHHHHHHHHTCCEEEECCCT----TTTTHHHHHHHHHHHHHHTC-----EE----EEBSSCCTTTHHHHHHHHHHTT
T ss_pred eHHHHHHHHHHcCCCeeeEeecC----CcccHHHHHHHHHHHHHcCc-----eE----CCCCCccHhHHHHHHHHHHHcC
Confidence 566665543 5555689999985 35578999988888888773 22 267777 68999999999999
Q ss_pred CEEEeeccc
Q 037144 264 IWVHVDAAY 272 (502)
Q Consensus 264 ~~lhVDaA~ 272 (502)
+..++==.|
T Consensus 236 v~~viPHIY 244 (275)
T 3m6y_A 236 VEQVIPHVY 244 (275)
T ss_dssp CSCBCCEEC
T ss_pred CCeeccccc
Confidence 765443333
No 259
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=50.23 E-value=58 Score=29.20 Aligned_cols=65 Identities=14% Similarity=0.051 Sum_probs=37.7
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
.|++.........+.++.++- .+..+++| --|.+.+++++++..+....+-+++-++|....+.+
T Consensus 35 ~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 99 (248)
T 3op4_A 35 KVIGTATSESGAQAISDYLGD---NGKGMALN-----VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLL 99 (248)
T ss_dssp EEEEEESSHHHHHHHHHHHGG---GEEEEECC-----TTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCG
T ss_pred EEEEEeCCHHHHHHHHHHhcc---cceEEEEe-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 344333333445555555655 67778876 347888888887654432234467777776555443
No 260
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=49.12 E-value=83 Score=28.60 Aligned_cols=65 Identities=14% Similarity=-0.015 Sum_probs=38.6
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
.|++.........+....++- ++..+.+| --|.+.+++++++..+....+-+|+-++|....+.+
T Consensus 31 ~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D-----v~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~ 95 (281)
T 3m1a_A 31 TVIGTARRTEALDDLVAAYPD---RAEAISLD-----VTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAF 95 (281)
T ss_dssp EEEEEESSGGGGHHHHHHCTT---TEEEEECC-----TTCHHHHHHHHHHHHHHHSCCSEEEECCCCEEECCT
T ss_pred EEEEEeCCHHHHHHHHHhccC---CceEEEee-----CCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCh
Confidence 333333333445555555655 78888886 347888888877654332234467777776655554
No 261
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=48.66 E-value=75 Score=29.00 Aligned_cols=59 Identities=22% Similarity=0.147 Sum_probs=35.7
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT 244 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt 244 (502)
+++++ .......+.+..++- ++..+++|- -|.+.+++++++..+....+-+++-++|..
T Consensus 55 V~~~~-r~~~~~~~~~~~~~~---~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~ 113 (272)
T 4dyv_A 55 VALAG-RRLDALQETAAEIGD---DALCVPTDV-----TDPDSVRALFTATVEKFGRVDVLFNNAGTG 113 (272)
T ss_dssp EEEEE-SCHHHHHHHHHHHTS---CCEEEECCT-----TSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred EEEEE-CCHHHHHHHHHHhCC---CeEEEEecC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 44443 333455566666665 788888873 478888888876544322344677777654
No 262
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=47.94 E-value=1.2e+02 Score=28.08 Aligned_cols=68 Identities=13% Similarity=0.122 Sum_probs=38.1
Q ss_pred EEEeCCCCchhHHHHHHHc-CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 177 VVYSSDQTHCAFQKAAQIV-GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~-Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
+++++. .-....+.+..+ ..|..++..+.+|- -|.+.+++++++..++-..+-+|+-++|....+.+.
T Consensus 68 V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~ 136 (293)
T 3rih_A 68 VAVAAR-SPRELSSVTAELGELGAGNVIGVRLDV-----SDPGSCADAARTVVDAFGALDVVCANAGIFPEARLD 136 (293)
T ss_dssp EEEEES-SGGGGHHHHHHHTTSSSSCEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTT
T ss_pred EEEEEC-CHHHHHHHHHHHHhhCCCcEEEEEEeC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 444443 333344433333 33323788888873 478888888876544322344677777766655544
No 263
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=47.80 E-value=80 Score=28.28 Aligned_cols=60 Identities=13% Similarity=0.068 Sum_probs=36.5
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~ 245 (502)
+++++ -......+.++.++. ++..+.+|- -|.+.+++++++..+....+-+|+-++|...
T Consensus 36 V~~~~-r~~~~~~~~~~~~~~---~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~ 95 (261)
T 3n74_A 36 VVIVD-RDKAGAERVAGEIGD---AALAVAADI-----SKEADVDAAVEAALSKFGKVDILVNNAGIGH 95 (261)
T ss_dssp EEEEE-SCHHHHHHHHHHHCT---TEEEEECCT-----TSHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred EEEEc-CCHHHHHHHHHHhCC---ceEEEEecC-----CCHHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence 44443 344455566666666 888898873 3778888887765443223446777776543
No 264
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=47.71 E-value=76 Score=29.02 Aligned_cols=44 Identities=14% Similarity=0.050 Sum_probs=29.0
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+|- -|.+.+++++++..+.-..+-+|+-++|....+.+
T Consensus 74 ~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 117 (279)
T 3sju_A 74 DVDGSSCDV-----TSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGET 117 (279)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHCSCCEEEECCCCCCCSCG
T ss_pred cEEEEECCC-----CCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCh
Confidence 788888873 47888888887654432234467777776655544
No 265
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=47.71 E-value=60 Score=29.58 Aligned_cols=42 Identities=17% Similarity=0.150 Sum_probs=28.3
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCC
Q 037144 194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGT 243 (502)
Q Consensus 194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gt 243 (502)
-.|. ++..+++| --|.+++++.+++..++-.++-++|-++|.
T Consensus 53 ~~g~---~~~~~~~D-----vt~~~~v~~~~~~~~~~~G~iDiLVNNAGi 94 (254)
T 4fn4_A 53 GMGK---EVLGVKAD-----VSKKKDVEEFVRRTFETYSRIDVLCNNAGI 94 (254)
T ss_dssp HTTC---CEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred hcCC---cEEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence 3455 88899987 348888988887765542334456667764
No 266
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=46.81 E-value=36 Score=30.22 Aligned_cols=51 Identities=10% Similarity=0.030 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144 217 AESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 217 ~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV 268 (502)
..+=|.+++=.+-.|..|..|++..- +..|.....+++.++|++||+.++.
T Consensus 151 ~GhTEAavdLarLAGl~Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 151 GGHTEATIDLMTLAGFKPAGVLCELT-NDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp CSHHHHHHHHHHHTTSCSCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred CCcHHHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEEE
Confidence 44556667666678888988877654 4668899999999999999987653
No 267
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=46.78 E-value=1e+02 Score=27.76 Aligned_cols=45 Identities=24% Similarity=0.144 Sum_probs=29.5
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
.++..+++|- -|.+.+++++++..++...+-+|+-++|....+.+
T Consensus 73 ~~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~ 117 (266)
T 3o38_A 73 GRVEAVVCDV-----TSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPV 117 (266)
T ss_dssp SCEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred CceEEEEeCC-----CCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCCc
Confidence 3788888873 37888888887654432234567777776555443
No 268
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=46.34 E-value=1.1e+02 Score=27.59 Aligned_cols=44 Identities=7% Similarity=-0.041 Sum_probs=28.9
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+|- -|.+.+++++++..+....+-+++-++|....+.+
T Consensus 55 ~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 98 (258)
T 3oid_A 55 KVLVVKANV-----GQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPV 98 (258)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCG
T ss_pred cEEEEEcCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 788888873 47888888887654432234467777775554433
No 269
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=46.29 E-value=32 Score=32.40 Aligned_cols=58 Identities=16% Similarity=0.035 Sum_probs=43.1
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
.++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 29 ~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 29 GDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3579999999999998888886666666666777776677777788777664 356655
No 270
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=45.39 E-value=85 Score=29.09 Aligned_cols=44 Identities=2% Similarity=-0.059 Sum_probs=29.1
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+|- -|.+.+++++++..+....+-+|+-++|....+.+
T Consensus 81 ~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 124 (301)
T 3tjr_A 81 DAHGVVCDV-----RHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPL 124 (301)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSSCSEEEECCCCCCCBCG
T ss_pred ceEEEEccC-----CCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCc
Confidence 788888873 47888888887654432234467777776655544
No 271
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=44.61 E-value=1.3e+02 Score=27.55 Aligned_cols=62 Identities=11% Similarity=-0.078 Sum_probs=34.3
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT 244 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt 244 (502)
+++++. ......+.+..+.-...++..+++|- -|.+.+++++++..+....+-++|-++|..
T Consensus 55 V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~ 116 (283)
T 3v8b_A 55 VGALGR-TRTEVEEVADEIVGAGGQAIALEADV-----SDELQMRNAVRDLVLKFGHLDIVVANAGIN 116 (283)
T ss_dssp EEEEES-SHHHHHHHHHHHTTTTCCEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred EEEEeC-CHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 444433 33344444443321122788888873 478888888876544322344677777653
No 272
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=43.86 E-value=16 Score=34.61 Aligned_cols=57 Identities=9% Similarity=0.209 Sum_probs=42.8
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
++.+|.+.+++.++...+.|..-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 26 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 26 QQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 579999999999998888886666666666776666667777788777664 366655
No 273
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=43.14 E-value=30 Score=32.80 Aligned_cols=58 Identities=9% Similarity=-0.007 Sum_probs=45.5
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh--CCEEEe
Q 037144 211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF--GIWVHV 268 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~--g~~lhV 268 (502)
.++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 22 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 22 DDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 3579999999999998888887666777777777777778888888887765 466665
No 274
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=42.33 E-value=1.3e+02 Score=26.76 Aligned_cols=45 Identities=16% Similarity=0.124 Sum_probs=28.2
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
++..+.+|- -|.+.+++++++..+....+-+|+-++|....+.+.
T Consensus 57 ~~~~~~~Dv-----~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~ 101 (247)
T 2jah_A 57 KVHVLELDV-----ADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVE 101 (247)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCST
T ss_pred cEEEEECCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchh
Confidence 788888873 478888888876543222234677777765555443
No 275
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=42.19 E-value=46 Score=29.76 Aligned_cols=52 Identities=10% Similarity=-0.017 Sum_probs=39.9
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144 216 SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 216 d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV 268 (502)
..-+=|..++=.+-+|..|..|++-.- +..|..-..+++.++|++||+.++.
T Consensus 161 R~GHTEaaVdLarlAGl~Pa~VicEi~-~ddG~mar~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 161 RQGHTEMTVALAELANLVPITTICEMM-GDDGNAMSKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp CCSHHHHHHHHHHHTTSCSEEEEEEEB-CTTSSBCCHHHHHHHHHHHTCCEEE
T ss_pred CCCchHHHHHHHHHcCCCceEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 334556666666668888988887765 3569999999999999999988764
No 276
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=41.75 E-value=88 Score=28.31 Aligned_cols=46 Identities=7% Similarity=-0.070 Sum_probs=31.3
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP 251 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp 251 (502)
++..+.+| --|.+++++.+++..++-.++-++|-++|.+..+.+.+
T Consensus 48 ~~~~~~~D-----v~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~ 93 (247)
T 3ged_A 48 NLFYFHGD-----VADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSS 93 (247)
T ss_dssp TEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGT
T ss_pred CEEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCccc
Confidence 78888886 34788888888776554233446777777776666644
No 277
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=41.73 E-value=1.5e+02 Score=26.53 Aligned_cols=43 Identities=12% Similarity=-0.030 Sum_probs=26.4
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
++..+++|- -|.+.+++++++..+.-..+-+|+-++|....+.
T Consensus 56 ~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~ 98 (260)
T 1x1t_A 56 KVLYDGADL-----SKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTAL 98 (260)
T ss_dssp CEEEECCCT-----TSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCC
T ss_pred cEEEEECCC-----CCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC
Confidence 788888763 4788888888764432222346677776544443
No 278
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=41.38 E-value=1.4e+02 Score=26.99 Aligned_cols=49 Identities=14% Similarity=-0.002 Sum_probs=30.9
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
..|. ++..+.+|- -|.+.+++++++..+.-..+-+++-++|....+.+.
T Consensus 74 ~~~~---~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~ 122 (270)
T 3ftp_A 74 QAGL---EGRGAVLNV-----NDATAVDALVESTLKEFGALNVLVNNAGITQDQLAM 122 (270)
T ss_dssp HHTC---CCEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTT
T ss_pred hcCC---cEEEEEEeC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 3465 777888763 478888888876544322344677777766555443
No 279
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=41.28 E-value=36 Score=31.84 Aligned_cols=57 Identities=12% Similarity=0.195 Sum_probs=43.0
Q ss_pred CcccCHHHHHHHHHHHHh-cCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 212 SYGLSAESVLSQINLDVE-AELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~-~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
++.+|.+.+++.++...+ .|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 18 dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (293)
T 1f6k_A 18 DGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIA 78 (293)
T ss_dssp TSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 579999999999998888 786666666777777777777777888877663 355553
No 280
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=41.07 E-value=91 Score=28.53 Aligned_cols=72 Identities=17% Similarity=0.075 Sum_probs=46.6
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecC-C--ccccccCChhHHHHHHHHhCCEEEeeccccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVG-T--TAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 276 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g-t--t~~G~idpl~eI~~i~~~~g~~lhVDaA~g~~~ 276 (502)
..+.+...- ..+++++..++......|..-+.++--.+ + +..-..-+|..|..+.+.+++.+++|..|+.+.
T Consensus 131 kPV~lk~G~----~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 131 NPVLLKRGM----GNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp SCEEEECCT----TCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred CcEEEecCC----CCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 455665421 24899999999877777765444444211 1 121122367788888888899999999998764
No 281
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=40.95 E-value=97 Score=28.19 Aligned_cols=47 Identities=6% Similarity=0.014 Sum_probs=29.8
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
.|. ++..+.+|- -|.+.+++++++..++...+-+|+-++|....+.+
T Consensus 75 ~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 121 (277)
T 4fc7_A 75 TGR---RCLPLSMDV-----RAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPA 121 (277)
T ss_dssp HSS---CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred cCC---cEEEEEcCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCCc
Confidence 365 888888873 47888888887654432234467777775444433
No 282
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=40.47 E-value=1.8e+02 Score=26.06 Aligned_cols=44 Identities=20% Similarity=0.049 Sum_probs=27.5
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc-ccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT-AITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt-~~G~i 249 (502)
++..+.+|- -|.+.+++++++..+.-..+-+++-++|.. ..+.+
T Consensus 59 ~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~ 103 (259)
T 3edm_A 59 SALAIKADL-----TNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTI 103 (259)
T ss_dssp CCEEEECCT-----TCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCT
T ss_pred ceEEEEcCC-----CCHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCCh
Confidence 788888873 478888888876554322344666666644 34444
No 283
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=40.37 E-value=12 Score=35.39 Aligned_cols=57 Identities=9% Similarity=0.063 Sum_probs=40.8
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 86 (301)
T 1xky_A 27 NGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIA 86 (301)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEe
Confidence 579999999999998888776656666666666666667777777777654 355543
No 284
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=40.18 E-value=1.7e+02 Score=26.59 Aligned_cols=64 Identities=9% Similarity=-0.088 Sum_probs=34.1
Q ss_pred eEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144 176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT 244 (502)
Q Consensus 176 ~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt 244 (502)
..|++....-....+.+..+.-...++..+.+|- -|.+.++++++...+.-..+-+++-++|..
T Consensus 33 ~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 96 (280)
T 3tox_A 33 AKVVVTARNGNALAELTDEIAGGGGEAAALAGDV-----GDEALHEALVELAVRRFGGLDTAFNNAGAL 96 (280)
T ss_dssp CEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3444443333344444443322222788888763 477888888776544322344666666643
No 285
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=39.83 E-value=1.1e+02 Score=27.61 Aligned_cols=63 Identities=10% Similarity=-0.041 Sum_probs=35.7
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++++. ......+.++.++. ++..+++|- -|.+.+++++++..+.-..+-+|+-++|....+.
T Consensus 33 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~ 95 (263)
T 2a4k_A 33 LVAVDR-EERLLAEAVAALEA---EAIAVVADV-----SDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSAL 95 (263)
T ss_dssp EEEEES-CHHHHHHHHHTCCS---SEEEEECCT-----TSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTTTC
T ss_pred EEEEeC-CHHHHHHHHHHhcC---ceEEEEcCC-----CCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCC
Confidence 444433 33344445554553 788888763 3788888888765433223446777776554443
No 286
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=39.76 E-value=1.1e+02 Score=29.76 Aligned_cols=69 Identities=12% Similarity=0.013 Sum_probs=47.0
Q ss_pred CEEEEecCCCCCcc-cCHHHHHHHHHHHHhcCCccEEEEEecCCccc-c---ccCChhHHHHHHHHhCCEEEeecccccc
Q 037144 201 NIRAIKTTKSSSYG-LSAESVLSQINLDVEAELIPLFLCATVGTTAI-T---AVDPLKPLCDVAKQFGIWVHVDAAYAGS 275 (502)
Q Consensus 201 ~v~~v~~~~~~~~~-~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~-G---~idpl~eI~~i~~~~g~~lhVDaA~g~~ 275 (502)
.++.+.. |. .++++++.+++.....|...+++ +-.|++.. . ..-++..|..+.+.+++.+++|.+|+++
T Consensus 250 kPVilk~-----G~~~t~~e~~~Ave~i~~~Gn~~i~L-~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 250 KPILLKR-----GLSATIEEFIGAAEYIMSQGNGKIIL-CERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTG 323 (385)
T ss_dssp SCEEEEC-----CTTCCHHHHHHHHHHHHTTTCCCEEE-EECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHC
T ss_pred CcEEEec-----CCCCCHHHHHHHHHHHHHcCCCeEEE-EECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCC
Confidence 3555553 34 79999999998877777655433 33333322 1 1247888888888899999999999765
No 287
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=39.74 E-value=77 Score=28.02 Aligned_cols=68 Identities=12% Similarity=0.004 Sum_probs=42.7
Q ss_pred HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC----
Q 037144 188 FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG---- 263 (502)
Q Consensus 188 ~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g---- 263 (502)
+....+..|. +|+.+.. .+.++++.+++.+.. |-+|.++.....+...+.++++.+.+++.|
T Consensus 112 v~~~l~~~G~---~Vi~LG~------~vp~e~iv~~~~~~~-----~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~ 177 (215)
T 3ezx_A 112 VTTMLGANGF---QIVDLGV------DVLNENVVEEAAKHK-----GEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDS 177 (215)
T ss_dssp HHHHHHHTSC---EEEECCS------SCCHHHHHHHHHHTT-----TSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHCCC---eEEEcCC------CCCHHHHHHHHHHcC-----CCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCC
Confidence 3344566788 7776654 357788877766543 335666333334456677899999888876
Q ss_pred CEEEee
Q 037144 264 IWVHVD 269 (502)
Q Consensus 264 ~~lhVD 269 (502)
+.+.|=
T Consensus 178 v~v~vG 183 (215)
T 3ezx_A 178 VKCMFG 183 (215)
T ss_dssp SEEEEE
T ss_pred CEEEEE
Confidence 455553
No 288
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=39.19 E-value=1.3e+02 Score=27.01 Aligned_cols=45 Identities=13% Similarity=0.006 Sum_probs=29.1
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
++..+.+|- -|.+.+++.+++..+....+-+++-++|....+.+.
T Consensus 60 ~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~ 104 (265)
T 3lf2_A 60 RLFASVCDV-----LDALQVRAFAEACERTLGCASILVNNAGQGRVSTFA 104 (265)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHCSCSEEEECCCCCCCBCTT
T ss_pred eEEEEeCCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 588888873 478888888776544322344677777766655543
No 289
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=39.10 E-value=1.2e+02 Score=24.08 Aligned_cols=49 Identities=8% Similarity=0.100 Sum_probs=33.0
Q ss_pred cCHHHHHHHHHHHHhcC-----CccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144 215 LSAESVLSQINLDVEAE-----LIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 215 ~d~~~Le~~i~~~~~~g-----~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh 267 (502)
.|++.+.+.|++..++. ..|+++-+..-. ...++.+|.++|+++|+.++
T Consensus 25 ~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 25 AEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEEE
T ss_pred CCHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCCEEE
Confidence 48888888888766543 345444333221 23579999999999998764
No 290
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=38.83 E-value=24 Score=33.36 Aligned_cols=57 Identities=16% Similarity=0.057 Sum_probs=44.8
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
++.+|.+.+++.++...++|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 23 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 82 (309)
T 3fkr_A 23 TGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIV 82 (309)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 569999999999998888887777777777887777778888888887764 355554
No 291
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=38.81 E-value=1.6e+02 Score=26.72 Aligned_cols=43 Identities=14% Similarity=-0.050 Sum_probs=27.3
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
++..+++|- -|.+.+++++++..+.-..+-+|+-++|....+.
T Consensus 72 ~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~ 114 (277)
T 2rhc_B 72 EADGRTCDV-----RSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA 114 (277)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCSC
T ss_pred ceEEEECCC-----CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 788888763 3788888888765443223446777776554443
No 292
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=38.80 E-value=1.5e+02 Score=26.56 Aligned_cols=46 Identities=13% Similarity=0.033 Sum_probs=29.2
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 200 KNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 200 ~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
.++..+.+|- -|.+.+++++++..++...+-+++-++|....+.+.
T Consensus 60 ~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~ 105 (262)
T 3pk0_A 60 GKVIGVQTDV-----SDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLA 105 (262)
T ss_dssp SCEEEEECCT-----TSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTT
T ss_pred CcEEEEEcCC-----CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChh
Confidence 3788888873 478888888776544322344677777765555443
No 293
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=38.63 E-value=1.6e+02 Score=26.10 Aligned_cols=64 Identities=9% Similarity=-0.032 Sum_probs=34.8
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+++++........+..+..|. ++..+++|- -|.+.+++++++..+.-..+-+|+-++|....+.
T Consensus 34 V~~~~r~~~~~~~~~~~~~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 97 (249)
T 2ew8_A 34 IAIADLVPAPEAEAAIRNLGR---RVLTVKCDV-----SQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIP 97 (249)
T ss_dssp EEEEESSCCHHHHHHHHHTTC---CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred EEEEcCCchhHHHHHHHhcCC---cEEEEEeec-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 444443321233333333454 788888863 3778888887665432222446777777554443
No 294
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=38.47 E-value=1.4e+02 Score=26.93 Aligned_cols=43 Identities=12% Similarity=-0.070 Sum_probs=26.6
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
++..+.+|- -|.+.+++++++..+.-..+-+|+-++|....+.
T Consensus 72 ~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~ 114 (267)
T 1vl8_A 72 ETMAFRCDV-----SNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHP 114 (267)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred eEEEEEcCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCC
Confidence 788888763 3788888887765432222346666776554443
No 295
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=37.79 E-value=87 Score=24.97 Aligned_cols=72 Identities=10% Similarity=0.051 Sum_probs=41.0
Q ss_pred CCeEEEeCCCCchhHH---HHHHHcC---CCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 174 SKLVVYSSDQTHCAFQ---KAAQIVG---IDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 174 ~~~~v~~s~~~H~s~~---~aa~~~G---lg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
.+.++|....+.+|.. ......| + .+..++++.+. +-.++.+.+.+.......|.++ .. ....|
T Consensus 37 ~~Vvvy~~~~Cp~C~~a~k~~L~~~~~~~i---~~~~vdvd~~~----~~~~~~~~L~~~~g~~tVP~vf--i~-g~~ig 106 (129)
T 3ctg_A 37 KEVFVAAKTYCPYCKATLSTLFQELNVPKS---KALVLELDEMS----NGSEIQDALEEISGQKTVPNVY--IN-GKHIG 106 (129)
T ss_dssp SSEEEEECTTCHHHHHHHHHHHTTSCCCGG---GEEEEEGGGST----THHHHHHHHHHHHSCCSSCEEE--ET-TEEEE
T ss_pred CCEEEEECCCCCchHHHHHHHHHhcCccCC---CcEEEEccccC----CHHHHHHHHHHHhCCCCCCEEE--EC-CEEEc
Confidence 5678888777777643 3334456 5 78888886422 3345556666554444567543 22 33556
Q ss_pred ccCChhHH
Q 037144 248 AVDPLKPL 255 (502)
Q Consensus 248 ~idpl~eI 255 (502)
..|++.++
T Consensus 107 G~d~l~~l 114 (129)
T 3ctg_A 107 GNSDLETL 114 (129)
T ss_dssp SHHHHHHH
T ss_pred CHHHHHHH
Confidence 66666544
No 296
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=37.79 E-value=33 Score=32.41 Aligned_cols=57 Identities=4% Similarity=-0.063 Sum_probs=43.4
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
++.+|.+.+++.++...+.|-.-++|..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 29 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 29 TAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp TSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 568999999999988887776666677777777777777788888888775 355554
No 297
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=37.69 E-value=31 Score=32.42 Aligned_cols=58 Identities=14% Similarity=0.144 Sum_probs=42.7
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
+++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 21 ~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 21 QDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3579999999999988888886666666666777666677777787777664 355555
No 298
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=37.41 E-value=31 Score=32.47 Aligned_cols=58 Identities=16% Similarity=0.064 Sum_probs=42.2
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
.++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 30 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 90 (304)
T 3cpr_A 30 ESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIA 90 (304)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEe
Confidence 3579999999999998888876656666666766666667777777777654 355553
No 299
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=37.25 E-value=26 Score=33.29 Aligned_cols=58 Identities=12% Similarity=0.078 Sum_probs=44.4
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
.++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 38 ~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 98 (315)
T 3na8_A 38 ADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIV 98 (315)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3579999999999998888887666667777777777777778888887764 355555
No 300
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=37.16 E-value=32 Score=32.22 Aligned_cols=51 Identities=6% Similarity=-0.000 Sum_probs=40.2
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF 262 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~ 262 (502)
++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+.
T Consensus 18 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 18 DGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 579999999999998888886666666666777776667777888887765
No 301
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=37.09 E-value=1.8e+02 Score=25.77 Aligned_cols=43 Identities=12% Similarity=0.053 Sum_probs=27.6
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
++..+++|- -|.+.+++++++..+.-..+-+|+-++|....+.
T Consensus 52 ~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~ 94 (256)
T 1geg_A 52 HAVAVKVDV-----SDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTP 94 (256)
T ss_dssp CEEEEECCT-----TSHHHHHHHHHHHHHHTTCCCEEEECCCCCCCBC
T ss_pred cEEEEEecC-----CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 788888763 4788888888765443223446777777554443
No 302
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=36.88 E-value=35 Score=32.65 Aligned_cols=57 Identities=11% Similarity=-0.011 Sum_probs=41.3
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
++.+|.+.+++.++...+.|..-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 49 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 108 (332)
T 2r8w_A 49 AGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMA 108 (332)
T ss_dssp TCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 569999999999988877776656666666666666667777777777654 356655
No 303
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=36.67 E-value=1.7e+02 Score=26.13 Aligned_cols=44 Identities=11% Similarity=0.024 Sum_probs=27.1
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+++|- -|.+.+++++++..+.-..+-+|+-++|....+.+
T Consensus 58 ~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~ 101 (263)
T 3ai3_A 58 RVLEVAVDV-----ATPEGVDAVVESVRSSFGGADILVNNAGTGSNETI 101 (263)
T ss_dssp CEEEEECCT-----TSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCCCT
T ss_pred ceEEEEcCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 788888763 37888888877543321223466777765544433
No 304
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=36.45 E-value=1.1e+02 Score=27.37 Aligned_cols=62 Identities=15% Similarity=-0.079 Sum_probs=34.0
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
+++++. ......+.++.+|. ++..+++|- -|.+.+++++++..+.-..+-+|+-++|....+
T Consensus 32 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~~ 93 (254)
T 1hdc_A 32 VVLADV-LDEEGAATARELGD---AARYQHLDV-----TIEEDWQRVVAYAREEFGSVDGLVNNAGISTGM 93 (254)
T ss_dssp EEEEES-CHHHHHHHHHTTGG---GEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCS
T ss_pred EEEEeC-CHHHHHHHHHHhCC---ceeEEEecC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 444443 22334444444444 677888763 377888888775443222244666677655443
No 305
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=36.44 E-value=1e+02 Score=26.94 Aligned_cols=49 Identities=16% Similarity=-0.020 Sum_probs=30.4
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
..|. ++..+++|- -|.+.+++++++..+....+-+++-++|....+.+.
T Consensus 49 ~~~~---~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~ 97 (235)
T 3l77_A 49 EQGV---EVFYHHLDV-----SKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLE 97 (235)
T ss_dssp HHCC---CEEEEECCT-----TCHHHHHHHCC-HHHHHSSCSEEEECCCCCCCCCTT
T ss_pred hcCC---eEEEEEecc-----CCHHHHHHHHHHHHHhcCCCCEEEECCccccccCcc
Confidence 3466 888888873 478888887765443322344677777766555543
No 306
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=36.26 E-value=47 Score=32.13 Aligned_cols=58 Identities=14% Similarity=0.074 Sum_probs=42.6
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
.++.+|.+.+++.++...++|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 73 ~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 73 PDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3579999999999998888886666666677777776667777777776653 356655
No 307
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=36.19 E-value=1.8e+02 Score=26.22 Aligned_cols=44 Identities=23% Similarity=0.120 Sum_probs=28.8
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+|- -|.+.+++++++..+....+-+++-++|....+.+
T Consensus 82 ~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 125 (271)
T 3v2g_A 82 RAVAIRADN-----RDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPL 125 (271)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred cEEEEECCC-----CCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCh
Confidence 788888873 47888888887654432234467777776554443
No 308
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=36.17 E-value=1.3e+02 Score=27.41 Aligned_cols=59 Identities=12% Similarity=-0.089 Sum_probs=35.4
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT 244 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt 244 (502)
+++++ .......+....+|. ++..+.+|- -|.+.+++++++..+....+-+++-++|..
T Consensus 32 V~~~~-r~~~~~~~~~~~~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 90 (281)
T 3zv4_A 32 VAVLD-KSAERLRELEVAHGG---NAVGVVGDV-----RSLQDQKRAAERCLAAFGKIDTLIPNAGIW 90 (281)
T ss_dssp EEEEE-SCHHHHHHHHHHTBT---TEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEECCCCCC
T ss_pred EEEEe-CCHHHHHHHHHHcCC---cEEEEEcCC-----CCHHHHHHHHHHHHHhcCCCCEEEECCCcC
Confidence 44443 333445555555665 888888873 478888888876544322344666666643
No 309
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=36.12 E-value=1.2e+02 Score=27.39 Aligned_cols=44 Identities=18% Similarity=0.003 Sum_probs=28.8
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+|- -|.+.+++++++..+....+-+++-++|....+.+
T Consensus 79 ~~~~~~~D~-----~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 122 (269)
T 4dmm_A 79 EAFAVKADV-----SQESEVEALFAAVIERWGRLDVLVNNAGITRDTLL 122 (269)
T ss_dssp CEEEEECCT-----TSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred cEEEEECCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 788888873 47888888887654432234467777776655443
No 310
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=35.96 E-value=31 Score=32.32 Aligned_cols=57 Identities=16% Similarity=0.107 Sum_probs=40.7
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (292)
T 2ojp_A 16 KGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIA 75 (292)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 569999999999988877776656666666666666667777777777653 345543
No 311
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=35.79 E-value=28 Score=33.02 Aligned_cols=58 Identities=7% Similarity=0.089 Sum_probs=43.6
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
.++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 36 ~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 36 DNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3579999999999998888886666666667777776777777888877664 355555
No 312
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=35.61 E-value=1.7e+02 Score=26.51 Aligned_cols=44 Identities=14% Similarity=-0.007 Sum_probs=28.9
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+|- -|.+.+++++++..+....+-+|+-++|....+.+
T Consensus 94 ~~~~~~~Dl-----~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~ 137 (285)
T 2c07_A 94 ESSGYAGDV-----SKKEEISEVINKILTEHKNVDILVNNAGITRDNLF 137 (285)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHCSCCCEEEECCCCCCCCCT
T ss_pred ceeEEECCC-----CCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCch
Confidence 788888763 47888888887654433334567777776555444
No 313
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=35.60 E-value=2.3e+02 Score=25.42 Aligned_cols=43 Identities=9% Similarity=-0.011 Sum_probs=27.6
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
++..+.+|- -|.+.+++++++..+....+-+|+-++|....+.
T Consensus 81 ~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~ 123 (272)
T 1yb1_A 81 KVHTFVVDC-----SNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSD 123 (272)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHTCCCSEEEECCCCCCCCC
T ss_pred eEEEEEeeC-----CCHHHHHHHHHHHHHHCCCCcEEEECCCcCCCcc
Confidence 788888763 4788888888765443223446777777654443
No 314
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=35.57 E-value=2e+02 Score=26.08 Aligned_cols=44 Identities=5% Similarity=0.010 Sum_probs=29.6
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+++|- -|.+.+++++++..+.-..+-+|+-++|....+.+
T Consensus 77 ~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 120 (281)
T 3v2h_A 77 TVLHHPADM-----TKPSEIADMMAMVADRFGGADILVNNAGVQFVEKI 120 (281)
T ss_dssp CEEEECCCT-----TCHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCCG
T ss_pred cEEEEeCCC-----CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCc
Confidence 788888773 47888888887655443334467777776655544
No 315
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=35.56 E-value=99 Score=27.65 Aligned_cols=53 Identities=13% Similarity=0.023 Sum_probs=25.8
Q ss_pred hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
...+.++.++. ++..+.+|- -|.+.+++++++..+....+-+++-++|....+
T Consensus 43 ~~~~~~~~~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 95 (257)
T 3tpc_A 43 AGEEPAAELGA---AVRFRNADV-----TNEADATAALAFAKQEFGHVHGLVNCAGTAPGE 95 (257)
T ss_dssp ---------------CEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred HHHHHHHHhCC---ceEEEEccC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 34444444555 778888763 478888888876544322344677777655433
No 316
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=35.56 E-value=31 Score=32.23 Aligned_cols=57 Identities=11% Similarity=0.115 Sum_probs=42.5
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 16 DGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 579999999999998888786666666666776666677777888877664 355555
No 317
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=35.50 E-value=1.5e+02 Score=27.59 Aligned_cols=45 Identities=16% Similarity=0.025 Sum_probs=30.1
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
++..+.+|- -|.+.+++++++..+....+-++|-++|....+.+.
T Consensus 108 ~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~ 152 (317)
T 3oec_A 108 RIIARQADV-----RDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVV 152 (317)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTT
T ss_pred eEEEEECCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 788888873 478888888876544322344677777776666554
No 318
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=35.34 E-value=2.4e+02 Score=25.33 Aligned_cols=44 Identities=11% Similarity=-0.051 Sum_probs=28.0
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcC-CccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAE-LIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g-~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+|- -|.+.+++++++..+.- ..+-+++-++|....+.+
T Consensus 71 ~~~~~~~D~-----~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 115 (273)
T 1ae1_A 71 NVEGSVCDL-----LSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEA 115 (273)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCCCCT
T ss_pred ceEEEECCC-----CCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCCCCh
Confidence 788888763 47888888887654432 234466777776554444
No 319
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=35.31 E-value=1.8e+02 Score=25.95 Aligned_cols=44 Identities=7% Similarity=-0.025 Sum_probs=28.7
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+|- -|.+.+++.+++..+....+-+++-++|....+.+
T Consensus 62 ~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 105 (256)
T 3gaf_A 62 KAIGLECNV-----TDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPF 105 (256)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCT
T ss_pred cEEEEECCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCC
Confidence 788888873 47888888887654432234467777776555443
No 320
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=35.22 E-value=1.5e+02 Score=26.77 Aligned_cols=44 Identities=9% Similarity=-0.098 Sum_probs=28.6
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+|- -|.+.+++.+++..+.-..+-+++-++|....+.+
T Consensus 78 ~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 121 (280)
T 3pgx_A 78 KALTRVLDV-----RDDAALRELVADGMEQFGRLDVVVANAGVLSWGRV 121 (280)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCG
T ss_pred eEEEEEcCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 788888763 47888888887654432234467777776655544
No 321
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=35.21 E-value=1.4e+02 Score=26.88 Aligned_cols=47 Identities=13% Similarity=0.056 Sum_probs=27.3
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
.|. ++..+.+|- -|.+.+++++++..+....+-+++-++|....+.+
T Consensus 68 ~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 114 (266)
T 4egf_A 68 FGT---DVHTVAIDL-----AEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPV 114 (266)
T ss_dssp HCC---CEEEEECCT-----TSTTHHHHHHHHHHHHHTSCSEEEEECCCCCCCCG
T ss_pred cCC---cEEEEEecC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCh
Confidence 465 888888874 35566666665443322234467777776554443
No 322
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=35.18 E-value=99 Score=28.21 Aligned_cols=44 Identities=9% Similarity=0.015 Sum_probs=28.4
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+|- -|.+.+++++++..++-..+-+++-++|....+.+
T Consensus 82 ~~~~~~~Dl-----~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 125 (276)
T 3r1i_A 82 KALPIRCDV-----TQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAM 125 (276)
T ss_dssp CCEEEECCT-----TCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCG
T ss_pred eEEEEEcCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 788888873 47888888887654432234467777776555443
No 323
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=35.17 E-value=32 Score=32.64 Aligned_cols=58 Identities=14% Similarity=0.097 Sum_probs=43.0
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
.++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 37 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 97 (314)
T 3qze_A 37 AQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIA 97 (314)
T ss_dssp TTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3579999999999988888776666666677777776777777888777664 355555
No 324
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=35.16 E-value=1.8e+02 Score=25.89 Aligned_cols=44 Identities=5% Similarity=-0.173 Sum_probs=29.6
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+++|- -|.+.+++++++..+....+-+++-++|....+.+
T Consensus 60 ~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 103 (250)
T 3nyw_A 60 EPIVLPLDI-----TDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSL 103 (250)
T ss_dssp CCEEEECCT-----TCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC
T ss_pred cceEEeccC-----CCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCC
Confidence 778888873 47888888887654433345577777776655554
No 325
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=35.07 E-value=2.4e+02 Score=25.19 Aligned_cols=63 Identities=6% Similarity=0.011 Sum_probs=32.9
Q ss_pred eEEEeCCCCchhHHHHHHHc-CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144 176 LVVYSSDQTHCAFQKAAQIV-GIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT 244 (502)
Q Consensus 176 ~~v~~s~~~H~s~~~aa~~~-Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt 244 (502)
.++++.. .-....+..+.+ .++..++..+++|- -|.+++++.+++..++-..+-+++-++|..
T Consensus 34 ~Vvi~~r-~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~ 97 (256)
T 4fs3_A 34 KLVFTYR-KERSRKELEKLLEQLNQPEAHLYQIDV-----QSDEEVINGFEQIGKDVGNIDGVYHSIAFA 97 (256)
T ss_dssp EEEEEES-SGGGHHHHHHHHGGGTCSSCEEEECCT-----TCHHHHHHHHHHHHHHHCCCSEEEECCCCC
T ss_pred EEEEEEC-CHHHHHHHHHHHHhcCCCcEEEEEccC-----CCHHHHHHHHHHHHHHhCCCCEEEeccccc
Confidence 3444443 333344433322 22333778888873 478888888876544322233455555543
No 326
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=35.07 E-value=1.8e+02 Score=26.62 Aligned_cols=43 Identities=9% Similarity=-0.011 Sum_probs=27.3
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
++..+++|- -|.+.+++++++..+.-..+-+|+-++|....+.
T Consensus 84 ~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~ 126 (291)
T 3cxt_A 84 NAHGYVCDV-----TDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVP 126 (291)
T ss_dssp CCEEEECCT-----TCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCC
T ss_pred eEEEEEecC-----CCHHHHHHHHHHHHHHcCCCcEEEECCCcCCCCC
Confidence 677788763 4788888888765443223446777777554443
No 327
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=34.57 E-value=2e+02 Score=26.24 Aligned_cols=42 Identities=12% Similarity=0.141 Sum_probs=27.5
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
++..+++|- -|.+.++++++...+....+-+|+-++|....+
T Consensus 77 ~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~ 118 (302)
T 1w6u_A 77 KVHAIQCDV-----RDPDMVQNTVSELIKVAGHPNIVINNAAGNFIS 118 (302)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHTCSCSEEEECCCCCCCS
T ss_pred ceEEEEeCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 788888873 478888888876544333344677777654443
No 328
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=34.20 E-value=1.5e+02 Score=26.49 Aligned_cols=61 Identities=16% Similarity=0.114 Sum_probs=36.6
Q ss_pred eEEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144 176 LVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT 244 (502)
Q Consensus 176 ~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt 244 (502)
..|+..........+..+.+|. ++..+.+|- -|.+.+++++++..+....+-+++-++|..
T Consensus 29 ~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 89 (254)
T 3kzv_A 29 TVVYGVARSEAPLKKLKEKYGD---RFFYVVGDI-----TEDSVLKQLVNAAVKGHGKIDSLVANAGVL 89 (254)
T ss_dssp CEEEEEESCHHHHHHHHHHHGG---GEEEEESCT-----TSHHHHHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred eEEEEecCCHHHHHHHHHHhCC---ceEEEECCC-----CCHHHHHHHHHHHHHhcCCccEEEECCccc
Confidence 3444433333445555555665 788888873 478888888876544322344677777653
No 329
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=34.19 E-value=1.3e+02 Score=27.22 Aligned_cols=48 Identities=13% Similarity=0.073 Sum_probs=31.2
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
..|. ++..+.+|- -|.+.+++++++..+....+-+++-++|....+.+
T Consensus 65 ~~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 112 (270)
T 3is3_A 65 ALGS---DAIAIKADI-----RQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHL 112 (270)
T ss_dssp HTTC---CEEEEECCT-----TSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCG
T ss_pred hcCC---cEEEEEcCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 3455 888888873 47888888887654432234467777776655544
No 330
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=34.03 E-value=2.1e+02 Score=25.18 Aligned_cols=43 Identities=19% Similarity=0.128 Sum_probs=26.9
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
++..+++|- -|.+.+++++++..+....+-+++-++|....+.
T Consensus 55 ~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~ 97 (246)
T 2uvd_A 55 DAIAVRADV-----ANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNL 97 (246)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBC
T ss_pred cEEEEEcCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 788888763 3788888888765433222446667777554443
No 331
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=33.66 E-value=1.9e+02 Score=26.00 Aligned_cols=44 Identities=14% Similarity=0.009 Sum_probs=29.1
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+|- -|.+.+++++++..+....+-+++-++|....+.+
T Consensus 78 ~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~ 121 (267)
T 3u5t_A 78 KALTAQADV-----SDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTI 121 (267)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCG
T ss_pred eEEEEEcCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 788888873 37888888887654432335567777776555444
No 332
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=33.56 E-value=19 Score=31.50 Aligned_cols=48 Identities=23% Similarity=0.321 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhC--CEEEeeccccc
Q 037144 216 SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFG--IWVHVDAAYAG 274 (502)
Q Consensus 216 d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g--~~lhVDaA~g~ 274 (502)
|.++|+++++...+ .|++ ..|.+..|+++.+.++++| +.+|+|-..|-
T Consensus 18 ~~~~l~~al~s~~~------~ifl-----l~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~Gl 67 (192)
T 3kts_A 18 NQKDMEKILELDLT------YMVM-----LETHVAQLKALVKYAQAGGKKVLLHADLVNGL 67 (192)
T ss_dssp SSHHHHHHTTSSCC------EEEE-----CSEETTTHHHHHHHHHHTTCEEEEEGGGEETC
T ss_pred CHHHHHHHHcCCCC------EEEE-----ecCcHHHHHHHHHHHHHcCCeEEEecCchhcc
Confidence 67889998865432 3333 3567899999999999998 56788866543
No 333
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=33.52 E-value=16 Score=36.66 Aligned_cols=32 Identities=19% Similarity=0.225 Sum_probs=28.3
Q ss_pred CCccccccCChhHHHHHHHHhCCEEEeecccc
Q 037144 242 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 273 (502)
Q Consensus 242 gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g 273 (502)
..+-.|..++++++++-|+++|+.|++|.++.
T Consensus 69 i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 100 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNNVGVRIYVDAVIN 100 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eCCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 45678999999999999999999999998653
No 334
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=33.38 E-value=1.3e+02 Score=27.02 Aligned_cols=38 Identities=8% Similarity=-0.054 Sum_probs=24.7
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCC
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGT 243 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gt 243 (502)
++..+.+|- -|.+.++++++...+....+-+|+-++|.
T Consensus 79 ~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 79 EAESHACDL-----SHSDAIAAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp EEEEEECCT-----TCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred ceeEEEecC-----CCHHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 788888763 37788888877654332234467777765
No 335
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=33.36 E-value=1.5e+02 Score=26.78 Aligned_cols=59 Identities=15% Similarity=0.035 Sum_probs=34.6
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT 244 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt 244 (502)
+++++. ......+.+..+|. ++..+.+|- -|.+.+++++++..+.-..+-+++-++|..
T Consensus 38 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 38 VVLADL-PETDLAGAAASVGR---GAVHHVVDL-----TNEVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp EEEEEC-TTSCHHHHHHHHCT---TCEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred EEEEcC-CHHHHHHHHHHhCC---CeEEEECCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 444433 33445555555666 778888763 377888888776543322344666666654
No 336
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=33.34 E-value=1.3e+02 Score=27.13 Aligned_cols=44 Identities=18% Similarity=0.032 Sum_probs=28.5
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+|- -|.+.+++.+++..+.-..+-+++-++|....+.+
T Consensus 74 ~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~ 117 (277)
T 3tsc_A 74 RIVAAVVDT-----RDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAW 117 (277)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred eEEEEECCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 788888873 47888888887654432234467777776555443
No 337
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=33.32 E-value=29 Score=32.40 Aligned_cols=51 Identities=10% Similarity=0.102 Sum_probs=38.9
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF 262 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~ 262 (502)
++.+|.+.+++.++...+.|..-+++..|.|...+=..++-.++.+.+.+.
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~ 64 (288)
T 2nuw_A 14 QGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDV 64 (288)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 579999999999998888886666666666666666667777777777664
No 338
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=33.32 E-value=1.8e+02 Score=26.08 Aligned_cols=40 Identities=8% Similarity=-0.094 Sum_probs=24.9
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~ 245 (502)
++..+++|- -|.+.+++++++..+.-..+-+|+-++|...
T Consensus 65 ~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 104 (267)
T 1iy8_A 65 EVLTTVADV-----SDEAQVEAYVTATTERFGRIDGFFNNAGIEG 104 (267)
T ss_dssp CEEEEECCT-----TSHHHHHHHHHHHHHHHSCCSEEEECCCCCC
T ss_pred eEEEEEccC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 788888873 3788888888765432222335666666543
No 339
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=33.29 E-value=34 Score=32.01 Aligned_cols=51 Identities=10% Similarity=0.034 Sum_probs=38.9
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF 262 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~ 262 (502)
++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+.
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 14 DNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 579999999999998888876656666666666666667777787777764
No 340
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=32.70 E-value=30 Score=32.78 Aligned_cols=58 Identities=9% Similarity=0.056 Sum_probs=41.1
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
.++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 21 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpVia 81 (311)
T 3h5d_A 21 EDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIA 81 (311)
T ss_dssp TTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3568888888888888777776666666666776666667777777777665 245544
No 341
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=32.61 E-value=41 Score=30.50 Aligned_cols=37 Identities=32% Similarity=0.386 Sum_probs=29.0
Q ss_pred ccEEEEEecCCccccccCChhHHHHHHHHhCCEEEeecc
Q 037144 233 IPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 271 (502)
Q Consensus 233 ~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhVDaA 271 (502)
...+|++|-|.+..|. +|+ +.+++++++|+.+|+=|.
T Consensus 10 ~k~iillTDG~~~~g~-~p~-~aa~~a~~~gi~v~tIGi 46 (242)
T 3rag_A 10 IRQILVITDGCSNIGP-DPV-EAARRAHRHGIVVNVIGI 46 (242)
T ss_dssp EEEEEEEESSCCCSSS-CHH-HHHHHHHHTTCEEEEEEE
T ss_pred ccEEEEEccCCCCCCC-CHH-HHHHHHHHCCCEEEEEEe
Confidence 3468889999988886 777 556789999999887554
No 342
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=32.61 E-value=2.7e+02 Score=24.89 Aligned_cols=98 Identities=16% Similarity=0.026 Sum_probs=52.7
Q ss_pred cEEEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEE-E---eCC---------CCchhHHHHHHHcCCCCCCEEEEecC
Q 037144 142 GGVIQGTTCEALLCTLTAARDRVLKKIGRENISKLVV-Y---SSD---------QTHCAFQKAAQIVGIDRKNIRAIKTT 208 (502)
Q Consensus 142 ~g~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v-~---~s~---------~~H~s~~~aa~~~Glg~~~v~~v~~~ 208 (502)
-++..|||..+.+.+..+ ++. | -.++ + .+. ..+-...+.|+.+|+ .+..+++.
T Consensus 7 vvvl~SGGkDSs~al~~l-~~~-----G-----~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGI---pl~~v~~~ 72 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWA-IKN-----R-----FSVKFLVTMVSENEESYMYHTINANLTDLQARALGI---PLVKGFTQ 72 (237)
T ss_dssp EEEECCSSHHHHHHHHHH-HHT-----T-----CEEEEEEEEECC--------CCSSSHHHHHHHHHTC---CEEEEEC-
T ss_pred EEEEecCcHHHHHHHHHH-HHc-----C-----CeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCC---CEEEEECC
Confidence 367789999988655443 331 1 1111 1 111 123457778899999 99999876
Q ss_pred CCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC--C-hhHHHHHHHHhCCEEE
Q 037144 209 KSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD--P-LKPLCDVAKQFGIWVH 267 (502)
Q Consensus 209 ~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id--p-l~eI~~i~~~~g~~lh 267 (502)
... .--.++|.+++++. |. -.| .+|.++ . -..+-.+|.+.|+..+
T Consensus 73 g~~--~~e~e~l~~~l~~~---~i--~~v-------v~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 73 GEK--EKEVEDLKRVLSGL---KI--QGI-------VAGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp -------CHHHHHHHHTTS---CC--SEE-------ECC---CCSHHHHHHHHHHHTTCEEE
T ss_pred CCc--hHHHHHHHHHHHhc---CC--cEE-------EECCcchHHHHHHHHHHHHHcCCEEE
Confidence 321 22356777776432 10 011 356663 2 3456678888887754
No 343
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=32.55 E-value=2.4e+02 Score=24.85 Aligned_cols=40 Identities=20% Similarity=0.138 Sum_probs=25.1
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~ 245 (502)
++..+++|- -|.+.+++++++..+....+-+|+-++|...
T Consensus 63 ~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~ 102 (260)
T 3awd_A 63 DVSSVVMDV-----TNTESVQNAVRSVHEQEGRVDILVACAGICI 102 (260)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred ceEEEEecC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 788888763 4788888888754332223446666666544
No 344
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=32.35 E-value=1.2e+02 Score=28.44 Aligned_cols=44 Identities=11% Similarity=0.071 Sum_probs=29.8
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+| --|.+.++++++...+....+-+|+-++|....+.+
T Consensus 60 ~~~~~~~D-----l~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~ 103 (319)
T 3ioy_A 60 EVMGVQLD-----VASREGFKMAADEVEARFGPVSILCNNAGVNLFQPI 103 (319)
T ss_dssp GEEEEECC-----TTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCG
T ss_pred eEEEEECC-----CCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCCc
Confidence 67778876 347888888887765543345577777776555543
No 345
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=32.30 E-value=66 Score=28.80 Aligned_cols=50 Identities=12% Similarity=0.071 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhcCCccEEEEEecCCcc-----------ccccCChhHHHHHHHHhCCEEEe
Q 037144 218 ESVLSQINLDVEAELIPLFLCATVGTTA-----------ITAVDPLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 218 ~~Le~~i~~~~~~g~~p~~Vv~t~gtt~-----------~G~idpl~eI~~i~~~~g~~lhV 268 (502)
-+=|.+++=.+-+|..|..|++..-. . .|.....+++.++|++||+.++.
T Consensus 152 GHTEAaVDLarLAGl~PagVicEi~~-~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 152 GHTEAGVELCRLAGKRPVAVISEIVD-DGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCT 212 (233)
T ss_dssp SHHHHHHHHHHHTTCCSBEEEEEBEE-CCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEE
T ss_pred ChHHHHHHHHHHcCCCceEEEEEeCC-CcccccccccCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 34456666566678888777776542 3 68899999999999999998764
No 346
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=32.26 E-value=2.8e+02 Score=24.90 Aligned_cols=61 Identities=18% Similarity=0.068 Sum_probs=35.1
Q ss_pred EEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEe-cCCcccc
Q 037144 178 VYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCAT-VGTTAIT 247 (502)
Q Consensus 178 v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t-~gtt~~G 247 (502)
|++..-......+.+..++- ++..+.+|- -|.+.++++++.. ++-..+-+++.+ ++....+
T Consensus 57 Vi~~~r~~~~~~~~~~~~~~---~~~~~~~Dl-----~~~~~v~~~~~~~-~~~~~id~lv~~aag~~~~~ 118 (281)
T 3ppi_A 57 VVIADLAAEKGKALADELGN---RAEFVSTNV-----TSEDSVLAAIEAA-NQLGRLRYAVVAHGGFGVAQ 118 (281)
T ss_dssp EEEEESCHHHHHHHHHHHCT---TEEEEECCT-----TCHHHHHHHHHHH-TTSSEEEEEEECCCCCCCCC
T ss_pred EEEEeCChHHHHHHHHHhCC---ceEEEEcCC-----CCHHHHHHHHHHH-HHhCCCCeEEEccCcccccc
Confidence 33333333445566666666 888998873 4788898888765 322233345544 4443333
No 347
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=32.18 E-value=2e+02 Score=25.66 Aligned_cols=39 Identities=21% Similarity=0.135 Sum_probs=24.7
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT 244 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt 244 (502)
++..+++|- -|.+.+++++++..+.-..+-+|+-++|..
T Consensus 57 ~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~id~lv~nAg~~ 95 (262)
T 1zem_A 57 EARSYVCDV-----TSEEAVIGTVDSVVRDFGKIDFLFNNAGYQ 95 (262)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred cEEEEEecC-----CCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 788888873 378888888776543222234666666654
No 348
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=32.00 E-value=1.5e+02 Score=26.15 Aligned_cols=38 Identities=8% Similarity=-0.060 Sum_probs=24.6
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCC
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGT 243 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gt 243 (502)
++..+++|- -|.+.+++.+++..+....+-+|+-++|.
T Consensus 59 ~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 59 TAISVAVDV-----SDPESAKAMADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp EEEEEECCT-----TSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred cEEEEEccC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 788888763 47788888877654432234466666665
No 349
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=31.98 E-value=2.1e+02 Score=25.26 Aligned_cols=53 Identities=13% Similarity=-0.011 Sum_probs=31.7
Q ss_pred hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
...+..+.++. ++..+++|- -|.+.+++++++..+....+-+|+-++|....+
T Consensus 48 ~~~~~~~~~~~---~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~ 100 (265)
T 2o23_A 48 GGEAQAKKLGN---NCVFAPADV-----TSEKDVQTALALAKGKFGRVDVAVNCAGIAVAS 100 (265)
T ss_dssp SHHHHHHHHCT---TEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred hHHHHHHHhCC---ceEEEEcCC-----CCHHHHHHHHHHHHHHCCCCCEEEECCccCCCC
Confidence 34444555565 788888873 377888888775443222344666666654443
No 350
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=31.93 E-value=37 Score=32.66 Aligned_cols=51 Identities=16% Similarity=0.126 Sum_probs=36.7
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF 262 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~ 262 (502)
++.+|.+.+++.++...+.|..-+++..|.|...+=..++-.++.+.+.+.
T Consensus 46 dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~ 96 (343)
T 2v9d_A 46 DGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDH 96 (343)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHH
Confidence 468899888888887777776656666666666666666777777776653
No 351
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=31.84 E-value=46 Score=31.94 Aligned_cols=57 Identities=11% Similarity=0.095 Sum_probs=38.5
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV 268 (502)
++.+|.+.+++.++...+.|..-+++..|.|...+=..++-.++.+.+-.-.+.+++
T Consensus 41 dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpVia 97 (344)
T 2hmc_A 41 DRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIV 97 (344)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEE
Confidence 568999999999988887776666666666666666666666666662223455443
No 352
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=31.79 E-value=2.6e+02 Score=25.08 Aligned_cols=42 Identities=10% Similarity=-0.018 Sum_probs=28.1
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
++..+++|- -|.+.+++++++..+....+-+|+-++|....+
T Consensus 72 ~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 113 (287)
T 3pxx_A 72 KAYTAEVDV-----RDRAAVSRELANAVAEFGKLDVVVANAGICPLG 113 (287)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred ceEEEEccC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcCccc
Confidence 888888873 478888888876544322344677777765554
No 353
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=31.78 E-value=1.9e+02 Score=25.97 Aligned_cols=45 Identities=13% Similarity=-0.079 Sum_probs=29.1
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
++..+.+|- -|.+.+++++++..+.-..+-+|+.++|....+.+.
T Consensus 76 ~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~ 120 (269)
T 3gk3_A 76 DFKAYAVDV-----ADFESCERCAEKVLADFGKVDVLINNAGITRDATFM 120 (269)
T ss_dssp CCEEEECCT-----TCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTT
T ss_pred ceEEEEecC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchh
Confidence 788888873 378888888776544322344677777766555443
No 354
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=31.49 E-value=1.9e+02 Score=26.24 Aligned_cols=42 Identities=12% Similarity=0.019 Sum_probs=27.2
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
++..+++|- -|.+.+++++++..+....+-+++-++|....+
T Consensus 77 ~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~ 118 (286)
T 3uve_A 77 RIVTAEVDV-----RDYDALKAAVDSGVEQLGRLDIIVANAGIGNGG 118 (286)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred ceEEEEcCC-----CCHHHHHHHHHHHHHHhCCCCEEEECCcccCCC
Confidence 788888873 478888888876544322344677777655444
No 355
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=31.19 E-value=35 Score=32.04 Aligned_cols=57 Identities=14% Similarity=0.134 Sum_probs=42.2
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh----CCEEEe
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF----GIWVHV 268 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~----g~~lhV 268 (502)
++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 22 NGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 569999999999998888886666666666666666667777777777664 366665
No 356
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=31.15 E-value=2e+02 Score=25.73 Aligned_cols=44 Identities=14% Similarity=0.044 Sum_probs=26.4
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
.+..+.+|- -|.+.+++++++..++-..+-+|+-++|....+.+
T Consensus 54 ~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~ 97 (260)
T 1nff_A 54 AARYVHLDV-----TQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTI 97 (260)
T ss_dssp GEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCT
T ss_pred CceEEEecC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCh
Confidence 567777763 37888888887544322224466777776554443
No 357
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=31.07 E-value=44 Score=31.18 Aligned_cols=57 Identities=12% Similarity=0.144 Sum_probs=40.9
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
.++ +|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 16 ~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~ 75 (291)
T 3a5f_A 16 NTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIA 75 (291)
T ss_dssp SSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 357 999999999988888876666666666776666667777777777653 355543
No 358
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=31.04 E-value=2.4e+02 Score=25.12 Aligned_cols=50 Identities=24% Similarity=0.053 Sum_probs=32.9
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
...|. ++..+++|- -|.+.+++++++..+....+-+|+-++|....+.+.
T Consensus 69 ~~~~~---~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~ 118 (267)
T 3gdg_A 69 KTYGI---KAKAYKCQV-----DSYESCEKLVKDVVADFGQIDAFIANAGATADSGIL 118 (267)
T ss_dssp HHHCC---CEECCBCCT-----TCHHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTT
T ss_pred HhcCC---ceeEEecCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcc
Confidence 34466 888888873 478888888877654433445677777766555443
No 359
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=30.83 E-value=2.9e+02 Score=24.84 Aligned_cols=44 Identities=18% Similarity=-0.013 Sum_probs=27.5
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+++| --|.+.+++++++..+.-..+-+|+-++|....+.+
T Consensus 78 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 121 (276)
T 2b4q_A 78 DCQAIPAD-----LSSEAGARRLAQALGELSARLDILVNNAGTSWGAAL 121 (276)
T ss_dssp CEEECCCC-----TTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCCT
T ss_pred ceEEEEee-----CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCc
Confidence 57777776 347888888887654432234467777776555444
No 360
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=30.76 E-value=1.9e+02 Score=26.12 Aligned_cols=45 Identities=9% Similarity=-0.061 Sum_probs=29.4
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
++..+++|- -|.+.+++.+++..+....+-+++-++|....+.+.
T Consensus 72 ~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~ 116 (281)
T 3s55_A 72 RCISAKVDV-----KDRAALESFVAEAEDTLGGIDIAITNAGISTIALLP 116 (281)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTT
T ss_pred eEEEEeCCC-----CCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcc
Confidence 788888873 478888888876544322344677777766555543
No 361
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=30.42 E-value=1.9e+02 Score=26.56 Aligned_cols=43 Identities=9% Similarity=-0.047 Sum_probs=28.2
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
++..+++|- -|.+.+++++++..+....+-+++.++|....+.
T Consensus 90 ~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~ 132 (299)
T 3t7c_A 90 RIIASQVDV-----RDFDAMQAAVDDGVTQLGRLDIVLANAALASEGT 132 (299)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC
T ss_pred ceEEEECCC-----CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 888888873 4788888888765443223446777777555443
No 362
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=30.22 E-value=2.7e+02 Score=24.17 Aligned_cols=46 Identities=17% Similarity=0.068 Sum_probs=28.7
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 195 VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 195 ~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
.+. ++..+..|- -|.+.+++++++..+.-..+-+|+-++|....+.
T Consensus 55 ~~~---~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~ 100 (248)
T 2pnf_A 55 YGV---KAHGVEMNL-----LSEESINKAFEEIYNLVDGIDILVNNAGITRDKL 100 (248)
T ss_dssp HCC---CEEEEECCT-----TCHHHHHHHHHHHHHHSSCCSEEEECCCCCCCCC
T ss_pred cCC---ceEEEEccC-----CCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCc
Confidence 365 788888763 4788888888765443223446666666554443
No 363
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=30.14 E-value=1.5e+02 Score=27.55 Aligned_cols=44 Identities=14% Similarity=-0.070 Sum_probs=28.4
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+| --|.+.+++++++..+....+-+++-++|....+.+
T Consensus 87 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~ 130 (322)
T 3qlj_A 87 EAVADGSN-----VADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMI 130 (322)
T ss_dssp EEEEECCC-----TTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCG
T ss_pred cEEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 78888876 347888888887654432234467777776655544
No 364
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=30.02 E-value=2.3e+02 Score=25.37 Aligned_cols=45 Identities=11% Similarity=-0.138 Sum_probs=26.2
Q ss_pred CEEEEecCCCCCcccCH----HHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 201 NIRAIKTTKSSSYGLSA----ESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~----~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
++..+.+|- -|. +.+++++++..+....+-+|+-++|....+.+.
T Consensus 63 ~~~~~~~Dl-----~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~ 111 (276)
T 1mxh_A 63 SAVLCKGDL-----SLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLL 111 (276)
T ss_dssp CEEEEECCC-----SSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSC
T ss_pred ceEEEeccC-----CCccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcc
Confidence 788888764 245 777777765433222344677777765444443
No 365
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=29.87 E-value=1.9e+02 Score=26.21 Aligned_cols=43 Identities=7% Similarity=-0.059 Sum_probs=25.8
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+|- -|.+.++++++...+.| .+-+++.++|....+.+
T Consensus 83 ~~~~~~~Dv-----~~~~~~~~~~~~~~~~g-~iD~lvnnAg~~~~~~~ 125 (275)
T 4imr_A 83 TAQELAGDL-----SEAGAGTDLIERAEAIA-PVDILVINASAQINATL 125 (275)
T ss_dssp CEEEEECCT-----TSTTHHHHHHHHHHHHS-CCCEEEECCCCCCCBCG
T ss_pred eEEEEEecC-----CCHHHHHHHHHHHHHhC-CCCEEEECCCCCCCCCc
Confidence 788888874 25566666666544433 24466777776555444
No 366
>3kfu_G Glutamyl-tRNA(Gln) amidotransferase subunit C; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=29.85 E-value=1.3e+02 Score=22.44 Aligned_cols=54 Identities=13% Similarity=0.078 Sum_probs=32.9
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHhhcCCCCCCCCCCCHHHHHH
Q 037144 4 AYAQEFRRQGHMFVDFMAEYYKNIDKYPVRSQVEPGYLKKRLPESAPYSPESVETILQ 61 (502)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~ 61 (502)
++.++......+ ++.|.+|++.+.+..+ ..+.| +.+.+....|..+.+-+++|+
T Consensus 22 l~eeE~~~~~~~-l~~Il~~ve~L~evDt-~~VeP--~~~~lReD~v~~~~~~e~~L~ 75 (92)
T 3kfu_G 22 LSPEEEALLLQD-LKRILDFVDALPRVEE-GGAEE--ALGRLREDEPRPSLPQAEALA 75 (92)
T ss_dssp CCHHHHHHHHHH-HHHHHHHHHTCCCCCC-CCCCC--CCCCCBCSCCCCCCCHHHHHT
T ss_pred CCHHHHHHHHHH-HHHHHHHHHHHHhcCC-CCCCC--CcCCCCCCCCCCCCCHHHHHH
Confidence 344555554444 5667778888887543 34445 445566666777777766654
No 367
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=29.85 E-value=1.9e+02 Score=25.66 Aligned_cols=43 Identities=14% Similarity=-0.039 Sum_probs=26.5
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
++..+++|- -|.+.+++++++..+.-..+-+|+-++|....+.
T Consensus 54 ~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~ 96 (258)
T 3a28_C 54 KAVFVGLDV-----TDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKP 96 (258)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCC
T ss_pred cEEEEEccC-----CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 788888873 4778888877754432222346666776554443
No 368
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=29.47 E-value=2.5e+02 Score=26.23 Aligned_cols=48 Identities=15% Similarity=0.057 Sum_probs=31.7
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
..|. ++..+++| --|.+.+++++++..+....+-+|+-++|....|.+
T Consensus 56 ~~~~---~~~~~~~D-----vtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~ 103 (324)
T 3u9l_A 56 DNDV---DLRTLELD-----VQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPA 103 (324)
T ss_dssp HHTC---CEEEEECC-----TTCHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCG
T ss_pred hcCC---cEEEEEee-----cCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCh
Confidence 3466 88888887 347888888887654432234467777776655544
No 369
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=29.16 E-value=2.5e+02 Score=25.03 Aligned_cols=38 Identities=8% Similarity=-0.099 Sum_probs=25.2
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCC
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGT 243 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gt 243 (502)
++..+.+|- -|.+.+++++++..+....+-+++-++|.
T Consensus 61 ~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 61 RALSVGTDI-----TDDAQVAHLVDETMKAYGRVDVVINNAFR 98 (264)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHTSCCSEEEECCCS
T ss_pred cEEEEEcCC-----CCHHHHHHHHHHHHHHcCCCcEEEECCCC
Confidence 788888873 47888888887655443334456666654
No 370
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=29.12 E-value=2e+02 Score=25.57 Aligned_cols=42 Identities=19% Similarity=0.156 Sum_probs=24.9
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
++..+++|- -|.+.+++++++..+....+-+|+-++|....+
T Consensus 59 ~~~~~~~D~-----~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~ 100 (263)
T 3ak4_A 59 GGFAVEVDV-----TKRASVDAAMQKAIDALGGFDLLCANAGVSTMR 100 (263)
T ss_dssp CCEEEECCT-----TCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCC
T ss_pred CCeEEEEeC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 566777763 378888888775443222244666677654443
No 371
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=29.04 E-value=34 Score=32.44 Aligned_cols=50 Identities=6% Similarity=0.031 Sum_probs=25.5
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ 261 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~ 261 (502)
++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~ 76 (316)
T 3e96_A 27 DGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVE 76 (316)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHH
Confidence 34666666666666555555443344444444444444444455555444
No 372
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=28.98 E-value=2.4e+02 Score=24.81 Aligned_cols=49 Identities=20% Similarity=0.073 Sum_probs=31.4
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
..|. ++..+++|- -|.+.+++++++..+....+-+++-++|....+.+.
T Consensus 51 ~~~~---~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~ 99 (246)
T 3osu_A 51 AKGV---DSFAIQANV-----ADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLM 99 (246)
T ss_dssp HTTS---CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTT
T ss_pred hcCC---cEEEEEccC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 3455 788888873 478888888876544322344677777766555443
No 373
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=28.88 E-value=1.9e+02 Score=23.20 Aligned_cols=69 Identities=9% Similarity=0.146 Sum_probs=38.8
Q ss_pred CCeEEEeC-----CCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144 174 SKLVVYSS-----DQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246 (502)
Q Consensus 174 ~~~~v~~s-----~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~ 246 (502)
.+.+||.. ..+.+| ..+..+..|+ .+..+.++. |+ .+.+.+.+.......|.+++ .| ...
T Consensus 35 ~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv---~y~~vdI~~------d~-~~~~~L~~~~G~~tvP~VfI--~G-~~i 101 (135)
T 2wci_A 35 NPILLYMKGSPKLPSCGFSAQAVQALAACGE---RFAYVDILQ------NP-DIRAELPKYANWPTFPQLWV--DG-ELV 101 (135)
T ss_dssp CSEEEEESBCSSSBSSHHHHHHHHHHHTTCS---CCEEEEGGG------CH-HHHHHHHHHHTCCSSCEEEE--TT-EEE
T ss_pred CCEEEEEEecCCCCCCccHHHHHHHHHHcCC---ceEEEECCC------CH-HHHHHHHHHHCCCCcCEEEE--CC-EEE
Confidence 56777766 455555 3345556688 888888753 33 35555555443334564332 23 356
Q ss_pred cccCChhHH
Q 037144 247 TAVDPLKPL 255 (502)
Q Consensus 247 G~idpl~eI 255 (502)
|..|++.++
T Consensus 102 GG~d~l~~l 110 (135)
T 2wci_A 102 GGCDIVIEM 110 (135)
T ss_dssp ESHHHHHHH
T ss_pred EChHHHHHH
Confidence 666776543
No 374
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=28.65 E-value=34 Score=32.44 Aligned_cols=57 Identities=12% Similarity=0.025 Sum_probs=43.1
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 26 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 85 (318)
T 3qfe_A 26 TDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMA 85 (318)
T ss_dssp TTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 568999999999988888776666777777777777777777888877664 355555
No 375
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=28.44 E-value=1.5e+02 Score=26.61 Aligned_cols=44 Identities=11% Similarity=0.039 Sum_probs=29.2
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+++|- -|.+.+++++++..+....+-+++-++|....+.+
T Consensus 64 ~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~ 107 (262)
T 3ksu_A 64 KVALYQSDL-----SNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPI 107 (262)
T ss_dssp EEEEEECCC-----CSHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCG
T ss_pred cEEEEECCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 788888873 47888888887654432334567777776555544
No 376
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=28.12 E-value=2e+02 Score=26.27 Aligned_cols=89 Identities=12% Similarity=0.164 Sum_probs=57.2
Q ss_pred EEeCCCCch-hHHHHHHHcCCCCCCEEEEecCCCC-------C----cccCHHHHHHHHHHHHhcCCccEEEEEe--cCC
Q 037144 178 VYSSDQTHC-AFQKAAQIVGIDRKNIRAIKTTKSS-------S----YGLSAESVLSQINLDVEAELIPLFLCAT--VGT 243 (502)
Q Consensus 178 v~~s~~~H~-s~~~aa~~~Glg~~~v~~v~~~~~~-------~----~~~d~~~Le~~i~~~~~~g~~p~~Vv~t--~gt 243 (502)
.+.+...|. .+.+.++..|- .-++-+|..+.+ . -.|+.+++++.|....+. .|.++-++ .|+
T Consensus 60 Ai~P~~p~~~~~a~~A~~~G~--EvllHlPMep~~~p~~~~gp~~L~~~~s~~ei~~~l~~al~~--vP~a~GvnNHmGS 135 (261)
T 2qv5_A 60 GFAASGNSLQRWMQDARREGH--EILLQIPLEPFGYPGTNPGPDTLLAGDPAKVNIDRLHRSMAK--ITNYTGVMNYLGG 135 (261)
T ss_dssp EEETTCSSHHHHHHHHHHHTC--CEEEEEEECCTTTTTSCCCTTCBCTTSCHHHHHHHHHHHHTT--CCCCSEEEEEECT
T ss_pred EECCCCCCHHHHHHHHHHCCC--EEEEECCCCCCCCCCCCCCcCcCcCCCCHHHHHHHHHHHHHH--CCCcEEEeccccc
Confidence 344444443 35566677776 234566765421 1 138899999999877653 34333333 488
Q ss_pred ccccccCChhHHHHHHHHhCCEEEeec
Q 037144 244 TAITAVDPLKPLCDVAKQFGIWVHVDA 270 (502)
Q Consensus 244 t~~G~idpl~eI~~i~~~~g~~lhVDa 270 (502)
-.|..-...+.+.+.++++|++++=+.
T Consensus 136 ~~T~~~~~M~~vm~~L~~~gL~FlDS~ 162 (261)
T 2qv5_A 136 RFLAEQSALEPVMRDIGKRGLLFLDDG 162 (261)
T ss_dssp TGGGCHHHHHHHHHHHHHTTCEEEECS
T ss_pred chhcCHHHHHHHHHHHHHCCCEEEcCC
Confidence 888888889999999999997766333
No 377
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=28.04 E-value=2e+02 Score=26.12 Aligned_cols=50 Identities=10% Similarity=0.007 Sum_probs=32.3
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
...|. ++..+.+|- -|.+.+++++++..+....+-+++-++|....+.+.
T Consensus 61 ~~~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~ 110 (285)
T 3sc4_A 61 EEAGG---QALPIVGDI-----RDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIE 110 (285)
T ss_dssp HHHTS---EEEEEECCT-----TSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTT
T ss_pred HhcCC---cEEEEECCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 34466 788888873 478888888876544322344677777766655543
No 378
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=28.00 E-value=2.4e+02 Score=25.48 Aligned_cols=81 Identities=15% Similarity=0.176 Sum_probs=52.0
Q ss_pred HHHHHHHcCCCCCCEEEEecCCCC-------C----cccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHH
Q 037144 188 FQKAAQIVGIDRKNIRAIKTTKSS-------S----YGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLC 256 (502)
Q Consensus 188 ~~~aa~~~Glg~~~v~~v~~~~~~-------~----~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~ 256 (502)
+.+.++..|. .-+..+|..+.+ . -.|+.+++++.|....+.-..-..|.--.|+-.|..-...+.+.
T Consensus 44 ~a~~A~~~G~--EvllHlPMep~~~~~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~~T~~~~~m~~vm 121 (245)
T 2nly_A 44 QAEIAQAAGL--EVIVHMPLEPKKGKISWLGPSGITSNLSVGEVKSRVRKAFDDIPYAVGLNNHMGSKIVENEKIMRAIL 121 (245)
T ss_dssp HHHHHHHTTC--EEEEEEEECCC--------CCCBCTTCCHHHHHHHHHHHHHHSTTCCEEEEEECTTGGGCHHHHHHHH
T ss_pred HHHHHHHCCC--EEEEEcCCCCCCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHCCCcEEEecccccchhcCHHHHHHHH
Confidence 4455666665 235567764421 0 15788999999987765422222333334888888888899999
Q ss_pred HHHHHhCCEEEeec
Q 037144 257 DVAKQFGIWVHVDA 270 (502)
Q Consensus 257 ~i~~~~g~~lhVDa 270 (502)
+.++++|++++=+.
T Consensus 122 ~~l~~~gL~fvDS~ 135 (245)
T 2nly_A 122 EVVKEKNAFIIDSG 135 (245)
T ss_dssp HHHHHTTCEEEECC
T ss_pred HHHHHCCCEEEcCC
Confidence 99999996554333
No 379
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=27.95 E-value=2.7e+02 Score=24.63 Aligned_cols=42 Identities=12% Similarity=-0.061 Sum_probs=26.8
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcC-CccEEEEEecCCcccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAE-LIPLFLCATVGTTAIT 247 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g-~~p~~Vv~t~gtt~~G 247 (502)
++..+++|- -|.+.+++++++..+.- ..+-+|+-++|....+
T Consensus 59 ~~~~~~~D~-----~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~ 101 (260)
T 2ae2_A 59 KVEASVCDL-----SSRSERQELMNTVANHFHGKLNILVNNAGIVIYK 101 (260)
T ss_dssp EEEEEECCT-----TCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCCC
T ss_pred cEEEEEcCC-----CCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCC
Confidence 677888763 37888888887654432 2344667777655444
No 380
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=27.84 E-value=2.6e+02 Score=24.53 Aligned_cols=54 Identities=19% Similarity=0.195 Sum_probs=31.3
Q ss_pred hHHHHHHHcCCCCCCE-EEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 187 AFQKAAQIVGIDRKNI-RAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 187 s~~~aa~~~Glg~~~v-~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
...+..+.++. ++ ..+..| --|.+.+++++++..+.+ .+-+|+-++|....+.+
T Consensus 47 ~~~~~~~~~~~---~~~~~~~~D-----~~~~~~~~~~~~~~~~~~-~id~li~~Ag~~~~~~~ 101 (254)
T 2wsb_A 47 ALDRAAQELGA---AVAARIVAD-----VTDAEAMTAAAAEAEAVA-PVSILVNSAGIARLHDA 101 (254)
T ss_dssp HHHHHHHHHGG---GEEEEEECC-----TTCHHHHHHHHHHHHHHS-CCCEEEECCCCCCCBCS
T ss_pred HHHHHHHHhcc---cceeEEEEe-----cCCHHHHHHHHHHHHhhC-CCcEEEECCccCCCCCc
Confidence 34444444454 66 777776 347888888877644312 24467777766555444
No 381
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=27.79 E-value=2.4e+02 Score=25.16 Aligned_cols=44 Identities=11% Similarity=0.021 Sum_probs=28.6
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+|- -|.+.+++++++..+....+-.|+-++|....+.+
T Consensus 77 ~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~ 120 (267)
T 4iiu_A 77 NGRLLSFDV-----ANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAF 120 (267)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHCCCSEEEECCCCCCCCCG
T ss_pred ceEEEEecC-----CCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCcc
Confidence 788888873 47888888887654432234467777776555543
No 382
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=27.44 E-value=23 Score=35.34 Aligned_cols=32 Identities=9% Similarity=0.006 Sum_probs=27.3
Q ss_pred CCccccccCChhHHHHHHHHhCCEEEeecccc
Q 037144 242 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 273 (502)
Q Consensus 242 gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~g 273 (502)
.....|..++++++++-|+++|+.|++|.++.
T Consensus 57 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~N 88 (448)
T 1g94_A 57 LQSRGGNRAQFIDMVNRCSAAGVDIYVDTLIN 88 (448)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 34567889999999999999999999998653
No 383
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=27.35 E-value=89 Score=24.81 Aligned_cols=43 Identities=19% Similarity=0.141 Sum_probs=29.7
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEE
Q 037144 216 SAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVH 267 (502)
Q Consensus 216 d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lh 267 (502)
.++.+.+.+++..+.|-+ .|+++.|. .+ +++.++|+++|+.++
T Consensus 67 p~~~v~~~v~e~~~~g~k--~v~~~~G~-----~~--~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 67 NPQNQLSEYNYILSLKPK--RVIFNPGT-----EN--EELEEILSENGIEPV 109 (122)
T ss_dssp CHHHHGGGHHHHHHHCCS--EEEECTTC-----CC--HHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHHHhcCCC--EEEECCCC-----Ch--HHHHHHHHHcCCeEE
Confidence 345566666666666644 46666654 23 699999999999887
No 384
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=27.25 E-value=3.1e+02 Score=23.82 Aligned_cols=40 Identities=20% Similarity=0.112 Sum_probs=23.0
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~ 245 (502)
++..+.+|- -|.+.+++++++..+....+-+|+-++|...
T Consensus 56 ~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~ 95 (247)
T 2hq1_A 56 NVVVAKGDV-----KNPEDVENMVKTAMDAFGRIDILVNNAGITR 95 (247)
T ss_dssp CEEEEESCT-----TSHHHHHHHHHHHHHHHSCCCEEEECC----
T ss_pred cEEEEECCC-----CCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 788888873 3788888887754332223446666666543
No 385
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=27.02 E-value=1.6e+02 Score=23.35 Aligned_cols=72 Identities=17% Similarity=0.169 Sum_probs=43.3
Q ss_pred CCeEEEeCCCCchhH--HHHHHH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 174 SKLVVYSSDQTHCAF--QKAAQI---VGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 174 ~~~~v~~s~~~H~s~--~~aa~~---~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
.+.+||....+.+|. .+.... +|+ ....+.++.+ -|.+++++.+.+.......|.+++ +....|.
T Consensus 14 ~~Vvvysk~~Cp~C~~ak~lL~~~~~~~v---~~~~idid~~----~d~~~~~~~l~~~~G~~tVP~IfI---~G~~IGG 83 (127)
T 3l4n_A 14 SPIIIFSKSTCSYSKGMKELLENEYQFIP---NYYIIELDKH----GHGEELQEYIKLVTGRGTVPNLLV---NGVSRGG 83 (127)
T ss_dssp CSEEEEECTTCHHHHHHHHHHHHHEEEES---CCEEEEGGGS----TTHHHHHHHHHHHHSCCSSCEEEE---TTEECCC
T ss_pred CCEEEEEcCCCccHHHHHHHHHHhcccCC---CcEEEEecCC----CCHHHHHHHHHHHcCCCCcceEEE---CCEEEcC
Confidence 467777776666663 233333 255 6777887642 366788888876654445675433 2345677
Q ss_pred cCChhHH
Q 037144 249 VDPLKPL 255 (502)
Q Consensus 249 idpl~eI 255 (502)
.|++.++
T Consensus 84 ~ddl~~l 90 (127)
T 3l4n_A 84 NEEIKKL 90 (127)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766654
No 386
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=26.61 E-value=42 Score=31.78 Aligned_cols=57 Identities=5% Similarity=0.060 Sum_probs=37.1
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
++.+|.+.+++.++...+.|..-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVia 86 (314)
T 3d0c_A 27 TREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVA 86 (314)
T ss_dssp TCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 568888888888887777775544445555555555556666676666553 355554
No 387
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=26.58 E-value=3.3e+02 Score=23.91 Aligned_cols=51 Identities=12% Similarity=-0.038 Sum_probs=33.6
Q ss_pred HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 192 AQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 192 a~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
....+. ++..+.+| --|.+.+++++++..+....+-+|+-++|....+.+.
T Consensus 58 ~~~~~~---~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~ 108 (256)
T 3ezl_A 58 QKALGF---DFYASEGN-----VGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFR 108 (256)
T ss_dssp HHHTTC---CCEEEECC-----TTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCCCCTT
T ss_pred HHhcCC---eeEEEecC-----CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCchh
Confidence 344565 78888876 3478888888877655443455777777766555443
No 388
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=26.48 E-value=3.2e+02 Score=25.05 Aligned_cols=84 Identities=12% Similarity=0.016 Sum_probs=53.2
Q ss_pred CCCchhHHHHHHHcCCCCCCEEEEecCCCCCcc-cCHHHHHHHHHHHHhcCCccEEEEEecCC-cccc-cc--CChhHHH
Q 037144 182 DQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYG-LSAESVLSQINLDVEAELIPLFLCATVGT-TAIT-AV--DPLKPLC 256 (502)
Q Consensus 182 ~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~-~d~~~Le~~i~~~~~~g~~p~~Vv~t~gt-t~~G-~i--dpl~eI~ 256 (502)
...+....+.+.-.|. .+.+.. |. .++++++.+++.....|...++++- -|+ +..+ .. -++..|.
T Consensus 131 ~~~n~~ll~~~a~~~k----PV~lk~-----G~~~t~~ei~~Ave~i~~~Gn~~i~L~~-Rg~~~yp~y~~~~vdl~~i~ 200 (276)
T 1vs1_A 131 NMQNFPLLREVGRSGK----PVLLKR-----GFGNTVEELLAAAEYILLEGNWQVVLVE-RGIRTFEPSTRFTLDVAAVA 200 (276)
T ss_dssp GTTCHHHHHHHHHHTC----CEEEEC-----CTTCCHHHHHHHHHHHHHTTCCCEEEEE-CCBCCSCCSSSSBCBHHHHH
T ss_pred cccCHHHHHHHHccCC----eEEEcC-----CCCCCHHHHHHHHHHHHHcCCCeEEEEe-CCcCCCCCcCcchhCHHHHH
Confidence 3345555555544554 556664 24 5999999999887777764433322 133 2222 22 4577788
Q ss_pred HHHHHhCCEEEeecccccc
Q 037144 257 DVAKQFGIWVHVDAAYAGS 275 (502)
Q Consensus 257 ~i~~~~g~~lhVDaA~g~~ 275 (502)
.+.+.+++.+.+|..|+.+
T Consensus 201 ~lk~~~~lpVi~dssH~~g 219 (276)
T 1vs1_A 201 VLKEATHLPVIVDPSHPAG 219 (276)
T ss_dssp HHHHHBSSCEEECCHHHHC
T ss_pred HHHHHhCCCEEEeCCCCCC
Confidence 7777789999999999765
No 389
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=26.21 E-value=28 Score=32.76 Aligned_cols=58 Identities=10% Similarity=-0.015 Sum_probs=42.2
Q ss_pred CCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 211 SSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 211 ~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
.++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 18 ~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (300)
T 3eb2_A 18 AEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVA 78 (300)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3579999999999998888886656666666666666667777788777664 345554
No 390
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=25.82 E-value=1.6e+02 Score=28.13 Aligned_cols=69 Identities=14% Similarity=0.055 Sum_probs=46.4
Q ss_pred CEEEEecCCCCCcc-cCHHHHHHHHHHHHhcCCccEEEEEecCC-cc---ccccCChhHHHHHHHHhCCEEEeecccccc
Q 037144 201 NIRAIKTTKSSSYG-LSAESVLSQINLDVEAELIPLFLCATVGT-TA---ITAVDPLKPLCDVAKQFGIWVHVDAAYAGS 275 (502)
Q Consensus 201 ~v~~v~~~~~~~~~-~d~~~Le~~i~~~~~~g~~p~~Vv~t~gt-t~---~G~idpl~eI~~i~~~~g~~lhVDaA~g~~ 275 (502)
..+.+.. |. .++++++.+++.....|...+++ +-.|+ +. +-..-++..|..+.+.+++.+.+|..|+.+
T Consensus 214 kPVilk~-----G~~~tl~ei~~Ave~i~~~GN~~viL-ceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G 287 (350)
T 1vr6_A 214 KPVLLKR-----GFMNTIEEFLLSAEYIANSGNTKIIL-CERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGG 287 (350)
T ss_dssp SCEEEEC-----CTTCCHHHHHHHHHHHHHTTCCCEEE-EECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHC
T ss_pred CcEEEcC-----CCCCCHHHHHHHHHHHHHCCCCeEEE-EeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCc
Confidence 4555653 23 48999999998877777654433 32333 22 122346788888888889999999999766
No 391
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=25.78 E-value=41 Score=31.33 Aligned_cols=51 Identities=16% Similarity=0.130 Sum_probs=38.7
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF 262 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~ 262 (502)
++.+|.+.+++.++...++|-.-+++..|.|...+=..++-.++.+.+.+.
T Consensus 13 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~ 63 (286)
T 2r91_A 13 GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSA 63 (286)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 458999999999998888876656666666666666667777888777764
No 392
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=25.68 E-value=43 Score=31.21 Aligned_cols=57 Identities=12% Similarity=0.152 Sum_probs=38.5
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 74 (289)
T 2yxg_A 15 NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIA 74 (289)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 358888888888887777776555566666666666666667777766653 255543
No 393
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=25.67 E-value=2.3e+02 Score=25.62 Aligned_cols=38 Identities=11% Similarity=-0.087 Sum_probs=24.3
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCC
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGT 243 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gt 243 (502)
++..+.+| --|.+.+++++++..+....+-+++-++|.
T Consensus 64 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 64 AIRYEPTD-----ITNEDETARAVDAVTAWHGRLHGVVHCAGG 101 (281)
T ss_dssp EEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred eEEEEeCC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 57777776 347888888887654432234466666664
No 394
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=25.66 E-value=2.6e+02 Score=25.07 Aligned_cols=42 Identities=7% Similarity=-0.016 Sum_probs=23.3
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
++..+++|- -|.+.+++++++..+.-..+-+|+-++|....+
T Consensus 59 ~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~ 100 (278)
T 1spx_A 59 NVNSVVADV-----TTDAGQDEILSTTLGKFGKLDILVNNAGAAIPD 100 (278)
T ss_dssp GEEEEECCT-----TSHHHHHHHHHHHHHHHSCCCEEEECCC-----
T ss_pred ceeEEeccc-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCc
Confidence 677888763 378888888775433222234666677654443
No 395
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=25.20 E-value=2.6e+02 Score=26.37 Aligned_cols=49 Identities=8% Similarity=-0.000 Sum_probs=31.7
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+..|. ++..+.+|- -|.+.+++++++..+.-..+-+||-++|....+.+
T Consensus 97 ~~~g~---~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~ 145 (346)
T 3kvo_A 97 EAVGG---KALPCIVDV-----RDEQQISAAVEKAIKKFGGIDILVNNASAISLTNT 145 (346)
T ss_dssp HHTTC---EEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCT
T ss_pred HhcCC---eEEEEEccC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCc
Confidence 44455 788888873 47888888887665432234567777776555544
No 396
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=25.17 E-value=2.4e+02 Score=24.84 Aligned_cols=45 Identities=7% Similarity=-0.075 Sum_probs=27.4
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccC
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVD 250 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~id 250 (502)
++..+++| --|.+.+++++++..++...+-+++-++|....+.+.
T Consensus 48 ~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~ 92 (247)
T 3dii_A 48 NLFYFHGD-----VADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILS 92 (247)
T ss_dssp TEEEEECC-----TTSHHHHHHHHHHHHHHHSCCCEEEECCC-CCCCGGG
T ss_pred cCCeEEee-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc
Confidence 56677776 3478888888876544322344677777766555543
No 397
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=25.05 E-value=3.5e+02 Score=23.72 Aligned_cols=43 Identities=14% Similarity=0.006 Sum_probs=28.1
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
++..+.+|- -|.+.+++++++..+.-..+-+|+-++|....+.
T Consensus 65 ~~~~~~~Dl-----~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~ 107 (265)
T 1h5q_A 65 KTKAYQCDV-----SNTDIVTKTIQQIDADLGPISGLIANAGVSVVKP 107 (265)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHSCSEEEEEECCCCCCCSC
T ss_pred eeEEEEeeC-----CCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCc
Confidence 788888763 4788888888765443334556677776554443
No 398
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=25.02 E-value=3.8e+02 Score=24.09 Aligned_cols=47 Identities=6% Similarity=-0.130 Sum_probs=29.7
Q ss_pred HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144 191 AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245 (502)
Q Consensus 191 aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~ 245 (502)
.....|- ++..+++|- -|.+++++.+++..++-.+.-++|-++|.+.
T Consensus 49 ~~~~~~~---~~~~~~~Dv-----~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~ 95 (258)
T 4gkb_A 49 ALAQRQP---RATYLPVEL-----QDDAQCRDAVAQTIATFGRLDGLVNNAGVND 95 (258)
T ss_dssp HHHHHCT---TCEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHhcCC---CEEEEEeec-----CCHHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 3344565 788888873 4788888888776544223445666777544
No 399
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=24.82 E-value=30 Score=34.88 Aligned_cols=31 Identities=13% Similarity=0.006 Sum_probs=26.8
Q ss_pred CccccccCChhHHHHHHHHhCCEEEeecccc
Q 037144 243 TTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 273 (502)
Q Consensus 243 tt~~G~idpl~eI~~i~~~~g~~lhVDaA~g 273 (502)
.+..|..++++++++-|+++|+.|++|.+..
T Consensus 72 d~~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 102 (483)
T 3bh4_A 72 RTKYGTKSELQDAIGSLHSRNVQVYGDVVLN 102 (483)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 4467889999999999999999999998753
No 400
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=24.57 E-value=31 Score=34.78 Aligned_cols=31 Identities=19% Similarity=0.019 Sum_probs=26.7
Q ss_pred CccccccCChhHHHHHHHHhCCEEEeecccc
Q 037144 243 TTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 273 (502)
Q Consensus 243 tt~~G~idpl~eI~~i~~~~g~~lhVDaA~g 273 (502)
....|..++++++++-|+++|+.|++|.+..
T Consensus 74 dp~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 104 (480)
T 1ud2_A 74 RTKYGTKAQLERAIGSLKSNDINVYGDVVMN 104 (480)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 4457888999999999999999999998753
No 401
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=24.57 E-value=2.1e+02 Score=25.36 Aligned_cols=50 Identities=10% Similarity=-0.014 Sum_probs=30.6
Q ss_pred hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT 244 (502)
Q Consensus 187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt 244 (502)
...+....++- ++..+++|- -|.+.+++++++..+.-..+-+++-++|..
T Consensus 36 ~~~~~~~~~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 85 (248)
T 3asu_A 36 RLQELKDELGD---NLYIAQLDV-----RNRAAIEEMLASLPAEWCNIDILVNNAGLA 85 (248)
T ss_dssp HHHHHHHHHCT---TEEEEECCT-----TCHHHHHHHHHTSCTTTCCCCEEEECCCCC
T ss_pred HHHHHHHHhcC---ceEEEEcCC-----CCHHHHHHHHHHHHHhCCCCCEEEECCCcC
Confidence 34444555554 788888863 478889888876443322344666666643
No 402
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=24.36 E-value=31 Score=34.27 Aligned_cols=30 Identities=27% Similarity=0.324 Sum_probs=23.3
Q ss_pred CccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 243 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 243 tt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
.+..|..++++++++-|+++|+.+++|.+.
T Consensus 80 d~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 109 (435)
T 1mxg_A 80 ETRFGSKEELVRLIQTAHAYGIKVIADVVI 109 (435)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 345677788888888888888888888764
No 403
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=24.35 E-value=2.6e+02 Score=25.03 Aligned_cols=49 Identities=16% Similarity=0.123 Sum_probs=31.3
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 193 QIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 193 ~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
+..|. ++..+++|- -|.+.+++++++..+....+-+|+-++|....+.+
T Consensus 75 ~~~~~---~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~ 123 (271)
T 4iin_A 75 EEKGY---KAAVIKFDA-----ASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLA 123 (271)
T ss_dssp HHTTC---CEEEEECCT-----TCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCG
T ss_pred HhcCC---ceEEEECCC-----CCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCccc
Confidence 33465 888888873 47788888877654432234567777776655544
No 404
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=24.27 E-value=3.5e+02 Score=23.49 Aligned_cols=44 Identities=11% Similarity=0.016 Sum_probs=26.9
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
++..+.+|- -|.+.++++++...+.-..+-+|+-++|....+.+
T Consensus 55 ~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~ 98 (251)
T 1zk4_A 55 QIQFFQHDS-----SDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSV 98 (251)
T ss_dssp TEEEEECCT-----TCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCT
T ss_pred ceEEEECCC-----CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCh
Confidence 677888763 37788888877643322223467777766554443
No 405
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=24.17 E-value=45 Score=31.15 Aligned_cols=57 Identities=16% Similarity=0.217 Sum_probs=39.5
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 74 (294)
T 2ehh_A 15 EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIA 74 (294)
T ss_dssp TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 458999999999988777776555666666666666666677777776653 355553
No 406
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=24.17 E-value=30 Score=34.41 Aligned_cols=26 Identities=19% Similarity=0.211 Sum_probs=13.5
Q ss_pred ccccCChhHHHHHHHHhCCEEEeecc
Q 037144 246 ITAVDPLKPLCDVAKQFGIWVHVDAA 271 (502)
Q Consensus 246 ~G~idpl~eI~~i~~~~g~~lhVDaA 271 (502)
.|..++++++++-|+++|+.|++|.+
T Consensus 66 ~Gt~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 66 YGSEREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 44445555555555555555555543
No 407
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=23.97 E-value=32 Score=35.09 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=26.4
Q ss_pred CccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 243 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 243 tt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
.+..|..++++++++-||++|+.|++|.+.
T Consensus 75 dp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 104 (515)
T 1hvx_A 75 RTKYGTKAQYLQAIQAAHAAGMQVYADVVF 104 (515)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 445788899999999999999999999865
No 408
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=23.95 E-value=48 Score=31.20 Aligned_cols=57 Identities=21% Similarity=0.177 Sum_probs=41.4
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHh---CCEEEe
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQF---GIWVHV 268 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~---g~~lhV 268 (502)
++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+. .+.+++
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVia 86 (306)
T 1o5k_A 27 NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIV 86 (306)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 468999999999988888876666666666776666667777777777654 355543
No 409
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=23.83 E-value=2.2e+02 Score=25.13 Aligned_cols=42 Identities=10% Similarity=-0.173 Sum_probs=24.0
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 202 IRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 202 v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+..+++| --|.+.+++++++..+....+-+|+-++|....+.
T Consensus 51 ~~~~~~D-----~~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~ 92 (245)
T 1uls_A 51 AHPVVMD-----VADPASVERGFAEALAHLGRLDGVVHYAGITRDNF 92 (245)
T ss_dssp CEEEECC-----TTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCC
T ss_pred CEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC
Confidence 4556665 23778888887765433223346666776554443
No 410
>3ip4_C Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} SCOP: a.137.12.1 PDB: 2df4_C 2dqn_C* 2g5h_C 2g5i_C* 2f2a_C
Probab=23.71 E-value=1.3e+02 Score=22.94 Aligned_cols=57 Identities=16% Similarity=0.114 Sum_probs=32.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHhcCCC---CCCCCCCchhHhhcCCCCCCCCCCCHHHHHH
Q 037144 4 AYAQEFRRQGHMFVDFMAEYYKNIDKY---PVRSQVEPGYLKKRLPESAPYSPESVETILQ 61 (502)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~ 61 (502)
++.++......+ ++.|.+|++.+.+. -|-|-.+|-++.+.+....+..+.+.+++|+
T Consensus 20 l~eeE~~~~~~~-l~~Il~~ve~L~evDt~~VeP~~~~~~~~~~lReD~v~~~~~~e~~L~ 79 (100)
T 3ip4_C 20 ISPEETEEMANT-LESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALK 79 (100)
T ss_dssp CCHHHHHHHHHH-HHHHHHHHGGGGGSCCTTCCCCSCCSCCCCCCBCSCCCCCCCHHHHHT
T ss_pred CCHHHHHHHHHH-HHHHHHHHHHHhhcCCCCCCcccccccccCCCCCCCCCCCCCHHHHHH
Confidence 344554444444 45566677776543 2334444444556666667777777776654
No 411
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=23.70 E-value=30 Score=34.42 Aligned_cols=30 Identities=27% Similarity=0.444 Sum_probs=21.6
Q ss_pred CccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 243 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 243 tt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
.+..|..++++++++-|+++|+.+++|.+.
T Consensus 77 ~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 77 NPEYGTLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 345566777778888888888888887653
No 412
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=23.65 E-value=33 Score=34.63 Aligned_cols=31 Identities=23% Similarity=0.135 Sum_probs=27.0
Q ss_pred CccccccCChhHHHHHHHHhCCEEEeecccc
Q 037144 243 TTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 273 (502)
Q Consensus 243 tt~~G~idpl~eI~~i~~~~g~~lhVDaA~g 273 (502)
....|..++++++++-|+++|+.|++|.+..
T Consensus 76 dp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 106 (485)
T 1wpc_A 76 RTKYGTRSQLQAAVTSLKNNGIQVYGDVVMN 106 (485)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4567888999999999999999999998753
No 413
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=23.54 E-value=3.5e+02 Score=24.41 Aligned_cols=39 Identities=13% Similarity=0.031 Sum_probs=24.8
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT 244 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt 244 (502)
.+..+.+|- -|.+.+++++++..+....+-+++-++|..
T Consensus 84 ~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~ 122 (281)
T 4dry_A 84 IVRAVVCDV-----GDPDQVAALFAAVRAEFARLDLLVNNAGSN 122 (281)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred eEEEEEcCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 457788763 478888888876544322344677777654
No 414
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=23.38 E-value=3e+02 Score=24.55 Aligned_cols=61 Identities=11% Similarity=-0.028 Sum_probs=33.5
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCC---ccEEEEEecCCcc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAEL---IPLFLCATVGTTA 245 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~---~p~~Vv~t~gtt~ 245 (502)
+++++........+..+.++- ++..+++|- -|.+.+++++++..+.-. .+-+|+-++|...
T Consensus 36 V~~~~r~~~~~~~~~~~~~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~ 99 (269)
T 2h7i_A 36 LVLTGFDRLRLIQRITDRLPA---KAPLLELDV-----QNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMP 99 (269)
T ss_dssp EEEEECSCHHHHHHHHTTSSS---CCCEEECCT-----TCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCC
T ss_pred EEEEecChHHHHHHHHHhcCC---CceEEEccC-----CCHHHHHHHHHHHHHHhCCCCCceEEEECCccCc
Confidence 444444332223444444444 667777763 378888888876543211 3556676776543
No 415
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=23.26 E-value=2.2e+02 Score=20.69 Aligned_cols=69 Identities=13% Similarity=0.097 Sum_probs=39.6
Q ss_pred CCeEEEeCCCCchhH-----HH---HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHh--cCCccEEEEEecCC
Q 037144 174 SKLVVYSSDQTHCAF-----QK---AAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVE--AELIPLFLCATVGT 243 (502)
Q Consensus 174 ~~~~v~~s~~~H~s~-----~~---aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~--~g~~p~~Vv~t~gt 243 (502)
++.+||.+...+++- .+ ..+-.|+ ....++++. |. ...+.+.+... ....|.+++ +.
T Consensus 2 ~~v~ly~~~~C~~c~~~~~~~~ak~~L~~~~i---~~~~~di~~------~~-~~~~~l~~~~g~~~~~vP~ifi---~g 68 (93)
T 1t1v_A 2 SGLRVYSTSVTGSREIKSQQSEVTRILDGKRI---QYQLVDISQ------DN-ALRDEMRTLAGNPKATPPQIVN---GN 68 (93)
T ss_dssp CCEEEEECSSCSCHHHHHHHHHHHHHHHHTTC---CCEEEETTS------CH-HHHHHHHHHTTCTTCCSCEEEE---TT
T ss_pred CCEEEEEcCCCCCchhhHHHHHHHHHHHHCCC---ceEEEECCC------CH-HHHHHHHHHhCCCCCCCCEEEE---CC
Confidence 457888888888772 23 3345688 888888863 33 34444544432 124565432 33
Q ss_pred ccccccCChhHH
Q 037144 244 TAITAVDPLKPL 255 (502)
Q Consensus 244 t~~G~idpl~eI 255 (502)
...|..|++.++
T Consensus 69 ~~igG~d~l~~l 80 (93)
T 1t1v_A 69 HYCGDYELFVEA 80 (93)
T ss_dssp EEEEEHHHHHHH
T ss_pred EEEeCHHHHHHH
Confidence 456666666554
No 416
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.91 E-value=2.7e+02 Score=21.79 Aligned_cols=70 Identities=11% Similarity=0.150 Sum_probs=39.4
Q ss_pred CCeEEEeCCCCchhH--HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC
Q 037144 174 SKLVVYSSDQTHCAF--QKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP 251 (502)
Q Consensus 174 ~~~~v~~s~~~H~s~--~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp 251 (502)
...++|....+.+|- ......+|+ .+..++++.+. +-..+.+.+.+.......|.+++ .| ...|..++
T Consensus 27 ~~vvvf~~~~Cp~C~~~~~~L~~~~i---~~~~vdid~~~----~~~~~~~~l~~~~g~~~vP~l~i--~G-~~igg~~~ 96 (130)
T 2cq9_A 27 NCVVIFSKTSCSYCTMAKKLFHDMNV---NYKVVELDLLE----YGNQFQDALYKMTGERTVPRIFV--NG-TFIGGATD 96 (130)
T ss_dssp SSEEEEECSSCSHHHHHHHHHHHHTC---CCEEEETTTST----THHHHHHHHHHHHSSCCSSEEEE--TT-EEEEEHHH
T ss_pred CcEEEEEcCCChHHHHHHHHHHHcCC---CcEEEECcCCc----CcHHHHHHHHHHhCCCCcCEEEE--CC-EEEcChHH
Confidence 456777777677663 445566788 88888887421 23444555554444445676543 33 34444444
Q ss_pred hh
Q 037144 252 LK 253 (502)
Q Consensus 252 l~ 253 (502)
+.
T Consensus 97 l~ 98 (130)
T 2cq9_A 97 TH 98 (130)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 417
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=22.82 E-value=3.3e+02 Score=24.36 Aligned_cols=48 Identities=13% Similarity=-0.009 Sum_probs=30.5
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccccc
Q 037144 194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAV 249 (502)
Q Consensus 194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~i 249 (502)
..|. ++..+++|- -|.+.+++++++..++...+-+++-++|....+.+
T Consensus 59 ~~~~---~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~ 106 (274)
T 3e03_A 59 AAGG---QGLALKCDI-----REEDQVRAAVAATVDTFGGIDILVNNASAIWLRGT 106 (274)
T ss_dssp HHTS---EEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCG
T ss_pred hcCC---eEEEEeCCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCc
Confidence 3465 788888873 47888888877654432234467777776554443
No 418
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=22.80 E-value=33 Score=34.50 Aligned_cols=31 Identities=23% Similarity=0.308 Sum_probs=23.8
Q ss_pred CCccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 242 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 242 gtt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
..+..|..++++++++-|+++|+.|++|.+.
T Consensus 90 idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 120 (478)
T 2guy_A 90 LNENYGTADDLKALSSALHERGMYLMVDVVA 120 (478)
T ss_dssp ECTTSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3456677788888888888888888888754
No 419
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=22.64 E-value=33 Score=35.05 Aligned_cols=28 Identities=14% Similarity=0.080 Sum_probs=17.3
Q ss_pred ccccccCChhHHHHHHHHhCCEEEeecc
Q 037144 244 TAITAVDPLKPLCDVAKQFGIWVHVDAA 271 (502)
Q Consensus 244 t~~G~idpl~eI~~i~~~~g~~lhVDaA 271 (502)
...|..++++++++-||++|+.|++|.+
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4455666666666666666666666643
No 420
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=22.58 E-value=2.4e+02 Score=25.05 Aligned_cols=37 Identities=11% Similarity=0.075 Sum_probs=24.9
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecC
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVG 242 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g 242 (502)
++..+.+|- -|.+.+++++++..+....+-+|+-++|
T Consensus 58 ~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~id~lv~~Ag 94 (264)
T 3i4f_A 58 RLQFVQADV-----TKKEDLHKIVEEAMSHFGKIDFLINNAG 94 (264)
T ss_dssp GEEEEECCT-----TSHHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred ceEEEEecC-----CCHHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 788888873 3788888888765443223446777776
No 421
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=22.51 E-value=29 Score=32.31 Aligned_cols=55 Identities=9% Similarity=-0.096 Sum_probs=37.7
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEEEe
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWVHV 268 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~lhV 268 (502)
++.+|.+.+++.++...+. -.-+++..|.|...+=..++-.++.+.+.+ .+.+++
T Consensus 13 dg~iD~~~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-rvpvia 67 (283)
T 2pcq_A 13 EGRLDEEAFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP-RKPFLV 67 (283)
T ss_dssp TCCBCHHHHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC-SSCCEE
T ss_pred CCCcCHHHHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh-CCcEEE
Confidence 5699999999999877665 444555566666666666666777777666 555543
No 422
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=22.36 E-value=33 Score=33.66 Aligned_cols=30 Identities=17% Similarity=0.137 Sum_probs=25.3
Q ss_pred ccccccCChhHHHHHHHHhCCEEEeecccc
Q 037144 244 TAITAVDPLKPLCDVAKQFGIWVHVDAAYA 273 (502)
Q Consensus 244 t~~G~idpl~eI~~i~~~~g~~lhVDaA~g 273 (502)
...|..++++++++-|+++|+.|++|.+..
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 92 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIVIN 92 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 456888899999999999999999998653
No 423
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=22.25 E-value=45 Score=31.23 Aligned_cols=50 Identities=8% Similarity=0.137 Sum_probs=31.3
Q ss_pred CcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHH
Q 037144 212 SYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQ 261 (502)
Q Consensus 212 ~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~ 261 (502)
++.+|.+.+++.++...+.|-.-+++..|.|...+=..++-.++.+.+.+
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~ 64 (297)
T 2rfg_A 15 NGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAE 64 (297)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHH
Confidence 35778888877777766666554455555555555555566666666554
No 424
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=22.22 E-value=2.8e+02 Score=24.19 Aligned_cols=42 Identities=14% Similarity=0.082 Sum_probs=25.9
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
++..+.+|- -|.+.+++++++..+....+-+|+-++|....+
T Consensus 53 ~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~ 94 (250)
T 2cfc_A 53 KVLRVRADV-----ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNS 94 (250)
T ss_dssp GEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCT
T ss_pred cEEEEEecC-----CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 678888763 478888888875443322344666666654433
No 425
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=22.10 E-value=3.7e+02 Score=24.26 Aligned_cols=42 Identities=14% Similarity=0.107 Sum_probs=25.9
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
++..+.+|- -|.+.++++++...+.-..+-+|+-++|....+
T Consensus 73 ~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~ 114 (303)
T 1yxm_A 73 RVIPIQCNI-----RNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLS 114 (303)
T ss_dssp CEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred cEEEEecCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 788888763 378888888776433222244677777644433
No 426
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=22.04 E-value=3.5e+02 Score=24.52 Aligned_cols=39 Identities=8% Similarity=-0.072 Sum_probs=25.0
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT 244 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt 244 (502)
++..+.+|- -|.+.+++++++..+....+-+++-++|..
T Consensus 98 ~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 136 (291)
T 3ijr_A 98 KCVLLPGDL-----SDEQHCKDIVQETVRQLGSLNILVNNVAQQ 136 (291)
T ss_dssp CEEEEESCT-----TSHHHHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred cEEEEECCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCc
Confidence 888888873 478888888876544322344566666543
No 427
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=21.86 E-value=79 Score=29.18 Aligned_cols=39 Identities=15% Similarity=0.162 Sum_probs=23.1
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCcc-cCHHHHHHHHHHHHhcC
Q 037144 190 KAAQIVGIDRKNIRAIKTTKSSSYG-LSAESVLSQINLDVEAE 231 (502)
Q Consensus 190 ~aa~~~Glg~~~v~~v~~~~~~~~~-~d~~~Le~~i~~~~~~g 231 (502)
+.++-+|+ +.+++|+..+..+. -..+.|++.++...+.|
T Consensus 38 ~~i~~~G~---N~VRi~~~~~~~~~~~~~~~ld~~v~~a~~~G 77 (294)
T 2whl_A 38 PAIAEQGA---NTIRIVLSDGGQWEKDDIDTIREVIELAEQNK 77 (294)
T ss_dssp HHHHHTTC---SEEEEEECCSSSSCCCCHHHHHHHHHHHHTTT
T ss_pred HHHHHcCC---CEEEEEecCCCccCccHHHHHHHHHHHHHHCC
Confidence 34455899 99999985211111 13556666666666655
No 428
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=21.81 E-value=2.8e+02 Score=24.09 Aligned_cols=43 Identities=16% Similarity=-0.057 Sum_probs=27.1
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
++..+.+|- -|.+.+++++++..+....+-+|+-++|....+.
T Consensus 59 ~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~ 101 (244)
T 2bd0_A 59 LTDTITADI-----SDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGA 101 (244)
T ss_dssp EEEEEECCT-----TSHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCC
T ss_pred eeeEEEecC-----CCHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCc
Confidence 677888763 3788888888765443223446777776654443
No 429
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=21.49 E-value=3.8e+02 Score=23.32 Aligned_cols=38 Identities=11% Similarity=-0.075 Sum_probs=23.8
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCC
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGT 243 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gt 243 (502)
++..+..|- -|.+.+++++++..+.-..+-+|+-++|.
T Consensus 58 ~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~id~vi~~Ag~ 95 (258)
T 3afn_B 58 DAAFFAADL-----ATSEACQQLVDEFVAKFGGIDVLINNAGG 95 (258)
T ss_dssp EEEEEECCT-----TSHHHHHHHHHHHHHHHSSCSEEEECCCC
T ss_pred ceEEEECCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 778888763 37888888887544322223466666664
No 430
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=21.47 E-value=3.4e+02 Score=23.78 Aligned_cols=54 Identities=7% Similarity=0.152 Sum_probs=32.2
Q ss_pred EEcCCchHHHHHHHHHHHHHHHHHhCccCCCCeEEEeCCCCchhHHHHHHHcCCCCCCEEEEec
Q 037144 144 VIQGTTCEALLCTLTAARDRVLKKIGRENISKLVVYSSDQTHCAFQKAAQIVGIDRKNIRAIKT 207 (502)
Q Consensus 144 ~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~ 207 (502)
++.|| +-+|+.++.-+... +.- .-..++++|+..-..+.+.|+..|+ .+..++.
T Consensus 7 vl~Sg-~Gsnl~ali~~~~~-----~~l-~~eI~~Visn~~~a~v~~~A~~~gI---p~~~~~~ 60 (211)
T 3p9x_A 7 IFASG-SGTNAEAIIQSQKA-----GQL-PCEVALLITDKPGAKVVERVKVHEI---PVCALDP 60 (211)
T ss_dssp EECCT-TCHHHHHHHHHHHT-----TCC-SSEEEEEEESCSSSHHHHHHHTTTC---CEEECCG
T ss_pred EEEeC-CchHHHHHHHHHHc-----CCC-CcEEEEEEECCCCcHHHHHHHHcCC---CEEEeCh
Confidence 44433 34688888766432 100 0245666776554567778888999 8777754
No 431
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=21.45 E-value=97 Score=28.63 Aligned_cols=19 Identities=11% Similarity=0.004 Sum_probs=13.7
Q ss_pred HHHHHHHcCCCCCCEEEEecCC
Q 037144 188 FQKAAQIVGIDRKNIRAIKTTK 209 (502)
Q Consensus 188 ~~~aa~~~Glg~~~v~~v~~~~ 209 (502)
..+.++-+|+ +.+++|+..
T Consensus 37 ~~~~lk~~G~---N~VRi~~~~ 55 (302)
T 1bqc_A 37 AFADIKSHGA---NTVRVVLSN 55 (302)
T ss_dssp HHHHHHHTTC---SEEEEEECC
T ss_pred HHHHHHHcCC---CEEEEEccC
Confidence 3344556899 999999864
No 432
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=21.45 E-value=1.2e+02 Score=29.84 Aligned_cols=29 Identities=10% Similarity=0.125 Sum_probs=17.4
Q ss_pred ccCHHHHHHHHHHHHhcCCccEEEEEecCC
Q 037144 214 GLSAESVLSQINLDVEAELIPLFLCATVGT 243 (502)
Q Consensus 214 ~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gt 243 (502)
..+++.++..|....+.+ .|+++-++.+.
T Consensus 21 ~~n~e~i~Ail~aAee~~-sPVIi~~s~~~ 49 (420)
T 2fiq_A 21 SAHPLVIEAALAFDRNST-RKVLIEATSNQ 49 (420)
T ss_dssp CCCHHHHHHHHHHTTTSC-CCEEEEEETTT
T ss_pred cCCHHHHHHHHHHHHHcC-CCEEEEcChhh
Confidence 346777777776654433 56666665544
No 433
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=21.29 E-value=3.8e+02 Score=24.15 Aligned_cols=55 Identities=13% Similarity=-0.024 Sum_probs=31.8
Q ss_pred EEEeCCCCchhHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCc
Q 037144 177 VVYSSDQTHCAFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTT 244 (502)
Q Consensus 177 ~v~~s~~~H~s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt 244 (502)
+++++. ......+.++.++. ++..+.+|- -|.+.+++++++. + .+-+|+-++|..
T Consensus 43 V~~~~r-~~~~~~~~~~~~~~---~~~~~~~Dl-----~d~~~v~~~~~~~---~-~iD~lv~nAg~~ 97 (291)
T 3rd5_A 43 VIMAVR-DTRKGEAAARTMAG---QVEVRELDL-----QDLSSVRRFADGV---S-GADVLINNAGIM 97 (291)
T ss_dssp EEEEES-CHHHHHHHHTTSSS---EEEEEECCT-----TCHHHHHHHHHTC---C-CEEEEEECCCCC
T ss_pred EEEEEC-CHHHHHHHHHHhcC---CeeEEEcCC-----CCHHHHHHHHHhc---C-CCCEEEECCcCC
Confidence 444432 33344455555554 788888873 3788888887653 1 234666666643
No 434
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=21.23 E-value=2.1e+02 Score=19.72 Aligned_cols=32 Identities=6% Similarity=0.221 Sum_probs=21.3
Q ss_pred CeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCC
Q 037144 175 KLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTK 209 (502)
Q Consensus 175 ~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~ 209 (502)
..++|.+..+.+| +.......|+ .+..++++.
T Consensus 2 ~i~~y~~~~C~~C~~~~~~l~~~~i---~~~~~~i~~ 35 (82)
T 1fov_A 2 NVEIYTKETCPYCHRAKALLSSKGV---SFQELPIDG 35 (82)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHTC---CCEEEECTT
T ss_pred cEEEEECCCChhHHHHHHHHHHCCC---CcEEEECCC
Confidence 4567766666655 3345566788 888888874
No 435
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=21.21 E-value=3.5e+02 Score=24.10 Aligned_cols=40 Identities=13% Similarity=-0.119 Sum_probs=25.6
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTA 245 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~ 245 (502)
++..+.+|- -|.+.+++++++..+.-..+-+|+-++|...
T Consensus 77 ~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~id~li~nAg~~~ 116 (272)
T 4e3z_A 77 EAVAIPGDV-----GNAADIAAMFSAVDRQFGRLDGLVNNAGIVD 116 (272)
T ss_dssp EEEEEECCT-----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred cEEEEEcCC-----CCHHHHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence 788888873 4778888887765443223446666766544
No 436
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=21.18 E-value=5.8e+02 Score=24.81 Aligned_cols=48 Identities=19% Similarity=0.162 Sum_probs=33.3
Q ss_pred hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecC
Q 037144 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVG 242 (502)
Q Consensus 187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~g 242 (502)
.+.+.++..|. ..+.+++| .-|.+..++.++.-.+...+.-++|-+.+
T Consensus 102 a~~~~i~~~G~---~a~~i~~D-----v~d~e~i~~vi~~i~~~~G~IDiLVhS~A 149 (401)
T 4ggo_A 102 AFDEAAKREGL---YSVTIDGD-----AFSDEIKAQVIEEAKKKGIKFDLIVYSLA 149 (401)
T ss_dssp HHHHHHHHHTC---CEEEEESC-----TTSHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred HHHHHHHHcCC---CceeEeCC-----CCCHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 35567778899 99999998 45788888888876655434444554444
No 437
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=21.05 E-value=98 Score=30.12 Aligned_cols=60 Identities=20% Similarity=0.171 Sum_probs=38.9
Q ss_pred cCHHHHHHHHHHHHhcCCccEEEEEecCCc-cccccCChhHHHHHHHHhCCEEEeeccccc
Q 037144 215 LSAESVLSQINLDVEAELIPLFLCATVGTT-AITAVDPLKPLCDVAKQFGIWVHVDAAYAG 274 (502)
Q Consensus 215 ~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt-~~G~idpl~eI~~i~~~~g~~lhVDaA~g~ 274 (502)
-+.++.++.|+...+.|..-++-.+-.+.. ..-....+++|.+.|+++|+-+++|-+-..
T Consensus 38 ~~~~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~~ 98 (385)
T 1x7f_A 38 STKEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPAV 98 (385)
T ss_dssp SCHHHHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHH
Confidence 356777788888777786554444433322 233457789999999999999999965433
No 438
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=21.01 E-value=37 Score=34.66 Aligned_cols=30 Identities=17% Similarity=0.172 Sum_probs=19.9
Q ss_pred CccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 243 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 243 tt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
....|..++++++++-|+++|+.|++|.++
T Consensus 73 dp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 73 DPQYGTMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp CTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 334566667777777777777777777654
No 439
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=20.97 E-value=3.7e+02 Score=24.04 Aligned_cols=42 Identities=10% Similarity=0.018 Sum_probs=25.7
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
++..+++|- -|.+.+++++++..+.-..+-+|+-++|....+
T Consensus 59 ~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~ 100 (280)
T 1xkq_A 59 QVNSVVADV-----TTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPD 100 (280)
T ss_dssp GEEEEECCT-----TSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC
T ss_pred ceEEEEecC-----CCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 577777763 478888888876543322344677777654443
No 440
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=20.96 E-value=3.3e+02 Score=22.92 Aligned_cols=69 Identities=13% Similarity=0.040 Sum_probs=39.5
Q ss_pred hHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCChhHHHHHHHHhCCEE
Q 037144 187 AFQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDPLKPLCDVAKQFGIWV 266 (502)
Q Consensus 187 s~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idpl~eI~~i~~~~g~~l 266 (502)
.+.+.+..+|+ .+..+.+-+| |.+.++++|++..++. -+|+.|.| +..|.-|=..+..+ +..|.-+
T Consensus 27 ~l~~~L~~~G~---~v~~~~iv~D-----d~~~I~~~l~~a~~~~---DlVittGG-~g~~~~D~T~ea~a--~~~~~~l 92 (172)
T 3kbq_A 27 FIGNFLTYHGY---QVRRGFVVMD-----DLDEIGWAFRVALEVS---DLVVSSGG-LGPTFDDMTVEGFA--KCIGQDL 92 (172)
T ss_dssp HHHHHHHHTTC---EEEEEEEECS-----CHHHHHHHHHHHHHHC---SEEEEESC-CSSSTTCCHHHHHH--HHHTCCC
T ss_pred HHHHHHHHCCC---EEEEEEEeCC-----CHHHHHHHHHHHHhcC---CEEEEcCC-CcCCcccchHHHHH--HHcCCCe
Confidence 45556677888 7776665432 6788888887654321 14555444 45566665555443 3335455
Q ss_pred Eee
Q 037144 267 HVD 269 (502)
Q Consensus 267 hVD 269 (502)
+.|
T Consensus 93 ~~~ 95 (172)
T 3kbq_A 93 RID 95 (172)
T ss_dssp EEC
T ss_pred eeC
Confidence 554
No 441
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=20.95 E-value=38 Score=34.14 Aligned_cols=26 Identities=27% Similarity=0.374 Sum_probs=13.8
Q ss_pred ccccCChhHHHHHHHHhCCEEEeecc
Q 037144 246 ITAVDPLKPLCDVAKQFGIWVHVDAA 271 (502)
Q Consensus 246 ~G~idpl~eI~~i~~~~g~~lhVDaA 271 (502)
.|..++++++++-|+++|+.|++|.+
T Consensus 78 ~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 78 YGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 44455555555555555555555543
No 442
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=20.79 E-value=4.3e+02 Score=23.17 Aligned_cols=42 Identities=7% Similarity=-0.077 Sum_probs=25.8
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCcccc
Q 037144 201 NIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAIT 247 (502)
Q Consensus 201 ~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G 247 (502)
++..+++|- -|.+.+++++++..+.-..+-+|+-++|....+
T Consensus 52 ~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~ 93 (255)
T 2q2v_A 52 KAVHHPADL-----SDVAQIEALFALAEREFGGVDILVNNAGIQHVA 93 (255)
T ss_dssp CEEEECCCT-----TSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCB
T ss_pred ceEEEeCCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 778888763 478888888875443222234666677654444
No 443
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=20.65 E-value=4.5e+02 Score=23.37 Aligned_cols=45 Identities=16% Similarity=0.129 Sum_probs=29.0
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccc
Q 037144 194 IVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAI 246 (502)
Q Consensus 194 ~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~ 246 (502)
..|. ++..+.+|- -|.+.+++++++..+....+-+++-++|....
T Consensus 71 ~~~~---~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~ 115 (278)
T 3sx2_A 71 DIGS---RIVARQADV-----RDRESLSAALQAGLDELGRLDIVVANAGIAPM 115 (278)
T ss_dssp HHTC---CEEEEECCT-----TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_pred hcCC---eEEEEeCCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 3455 888888873 47888888887654432234467777765443
No 444
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=20.56 E-value=38 Score=33.95 Aligned_cols=30 Identities=3% Similarity=-0.098 Sum_probs=15.9
Q ss_pred CHHHHHHHHHHHHhcCCccEEEEEecCCccccc
Q 037144 216 SAESVLSQINLDVEAELIPLFLCATVGTTAITA 248 (502)
Q Consensus 216 d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~ 248 (502)
+.++|++.+++..++|. -|++...-|-++.
T Consensus 95 t~~df~~lv~~~h~~Gi---~VilD~V~NH~~~ 124 (475)
T 2z1k_A 95 GNEALRHLLEVAHAHGV---RVILDGVFNHTGR 124 (475)
T ss_dssp CHHHHHHHHHHHHHTTC---EEEEEECCSBCCT
T ss_pred CHHHHHHHHHHHHHCCC---EEEEEEecccccC
Confidence 35666666666655552 3444554554443
No 445
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=20.46 E-value=32 Score=34.60 Aligned_cols=30 Identities=17% Similarity=0.205 Sum_probs=25.6
Q ss_pred CccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 243 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 243 tt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
.+..|..++++++++-|+++|+.|++|.++
T Consensus 68 dp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 97 (471)
T 1jae_A 68 NTRSGDESAFTDMTRRCNDAGVRIYVDAVI 97 (471)
T ss_dssp EETTEEHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 345788899999999999999999999765
No 446
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=20.23 E-value=41 Score=33.30 Aligned_cols=30 Identities=20% Similarity=0.191 Sum_probs=20.7
Q ss_pred CccccccCChhHHHHHHHHhCCEEEeeccc
Q 037144 243 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 272 (502)
Q Consensus 243 tt~~G~idpl~eI~~i~~~~g~~lhVDaA~ 272 (502)
....|..++++++++-||++|+.+++|.++
T Consensus 75 dp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~ 104 (424)
T 2dh2_A 75 DPNFGSKEDFDSLLQSAKKKSIRVILDLTP 104 (424)
T ss_dssp CGGGCCHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 445666777777777777777777777654
No 447
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=20.05 E-value=3.3e+02 Score=21.96 Aligned_cols=70 Identities=11% Similarity=0.149 Sum_probs=39.4
Q ss_pred CCeEEEeCCCCchh--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHhcCCccEEEEEecCCccccccCC
Q 037144 174 SKLVVYSSDQTHCA--FQKAAQIVGIDRKNIRAIKTTKSSSYGLSAESVLSQINLDVEAELIPLFLCATVGTTAITAVDP 251 (502)
Q Consensus 174 ~~~~v~~s~~~H~s--~~~aa~~~Glg~~~v~~v~~~~~~~~~~d~~~Le~~i~~~~~~g~~p~~Vv~t~gtt~~G~idp 251 (502)
...++|....+.+| +......+|+ .+..++++.+. +-..+.+.+.+.......|.+++ .| ...|..++
T Consensus 49 ~~Vvvf~~~~Cp~C~~~k~~L~~~~i---~~~~vdId~~~----~~~~~~~~L~~~~g~~tvP~ifi--~G-~~igG~d~ 118 (146)
T 2ht9_A 49 NCVVIFSKTSCSYCTMAKKLFHDMNV---NYKVVELDLLE----YGNQFQDALYKMTGERTVPRIFV--NG-TFIGGATD 118 (146)
T ss_dssp CSEEEEECTTCHHHHHHHHHHHHHTC---CCEEEEGGGCT----THHHHHHHHHHHHSCCCSCEEEE--TT-EEEESHHH
T ss_pred CCEEEEECCCChhHHHHHHHHHHcCC---CeEEEECccCc----CCHHHHHHHHHHhCCCCcCeEEE--CC-EEEeCchH
Confidence 46677777777666 3445566788 88888886421 23445555554444445676542 33 34454444
Q ss_pred hh
Q 037144 252 LK 253 (502)
Q Consensus 252 l~ 253 (502)
+.
T Consensus 119 l~ 120 (146)
T 2ht9_A 119 TH 120 (146)
T ss_dssp HH
T ss_pred HH
Confidence 33
Done!