Query 037145
Match_columns 155
No_of_seqs 114 out of 1098
Neff 6.5
Searched_HMMs 13730
Date Mon Mar 25 15:21:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037145.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037145hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2tpta1 a.46.2.1 (A:1-70) Thym 8.6 1.8E+02 0.013 16.1 3.8 25 65-89 22-46 (70)
2 d1uoua1 a.46.2.1 (A:33-100) Th 8.5 1.8E+02 0.013 16.1 3.8 26 64-89 21-46 (68)
3 d1o17a1 a.46.2.1 (A:1-70) Anth 7.3 1.5E+02 0.011 16.3 2.7 24 65-88 21-44 (70)
4 d1jb0m_ f.23.19.1 (M:) Subunit 7.3 1.5E+02 0.011 14.3 3.5 19 120-138 11-29 (31)
5 d2yvxa3 f.57.1.1 (A:276-448) M 6.8 3.3E+02 0.024 18.1 4.7 22 129-152 127-148 (173)
6 d2elca1 a.46.2.1 (A:1-52) Anth 5.8 2.2E+02 0.016 14.9 2.7 24 65-88 18-41 (52)
7 d1brwa1 a.46.2.1 (A:1-70) Pyri 5.0 2.3E+02 0.017 15.5 2.5 23 65-87 21-43 (70)
8 d1khda1 a.46.2.1 (A:12-80) Ant 4.7 3E+02 0.022 14.9 3.5 24 65-88 20-43 (69)
9 d1ppjg_ f.23.13.1 (G:) Ubiquin 4.5 3.6E+02 0.026 15.6 3.7 21 43-63 39-59 (75)
10 d1x7fa2 c.1.8.12 (A:1-244) Out 3.5 1.5E+02 0.011 21.4 0.8 53 14-87 186-240 (244)
No 1
>d2tpta1 a.46.2.1 (A:1-70) Thymidine phosphorylase {Escherichia coli [TaxId: 562]}
Probab=8.60 E-value=1.8e+02 Score=16.12 Aligned_cols=25 Identities=4% Similarity=0.052 Sum_probs=19.8
Q ss_pred HHHHHHHHHhccCChhhHHHHHHHH
Q 037145 65 AIPLVSVMFAGHLGDLELAGATLAN 89 (155)
Q Consensus 65 ~~~~vDtimvG~LG~~aLAAv~la~ 89 (155)
+..++|.++-|++++..++|.-.+.
T Consensus 22 ~~~~~~~i~~g~~~d~qi~afL~al 46 (70)
T d2tpta1 22 IRFFINGIRDNTISEGQIAALAMTI 46 (70)
T ss_dssp HHHHHHHHHHTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCchHHHHHHHHHHH
Confidence 4567899999999998888865543
No 2
>d1uoua1 a.46.2.1 (A:33-100) Thymidine phosphorylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.51 E-value=1.8e+02 Score=16.08 Aligned_cols=26 Identities=12% Similarity=0.123 Sum_probs=20.3
Q ss_pred HHHHHHHHHHhccCChhhHHHHHHHH
Q 037145 64 YAIPLVSVMFAGHLGDLELAGATLAN 89 (155)
Q Consensus 64 ~~~~~vDtimvG~LG~~aLAAv~la~ 89 (155)
-+..++|.++-|++.+.+++|.-.+.
T Consensus 21 E~~~~~~~i~~g~~s~~qi~afL~al 46 (68)
T d1uoua1 21 DIRGFVAAVVNGSAQGAQIGAMLMAI 46 (68)
T ss_dssp HHHHHHHHHHHTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 35678899999999998888765543
No 3
>d1o17a1 a.46.2.1 (A:1-70) Anthranilate phosphoribosyltransferase (TrpD) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=7.27 E-value=1.5e+02 Score=16.29 Aligned_cols=24 Identities=17% Similarity=0.304 Sum_probs=18.5
Q ss_pred HHHHHHHHHhccCChhhHHHHHHH
Q 037145 65 AIPLVSVMFAGHLGDLELAGATLA 88 (155)
Q Consensus 65 ~~~~vDtimvG~LG~~aLAAv~la 88 (155)
+..++|.++-|++++..+||.=.+
T Consensus 21 ~~~~~~~i~~g~~s~~qiaafL~a 44 (70)
T d1o17a1 21 AEELAKAIIRGEVPEILVSAILVA 44 (70)
T ss_dssp HHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHH
Confidence 456788899999999888876443
No 4
>d1jb0m_ f.23.19.1 (M:) Subunit XII of photosystem I reaction centre, PsaM {Synechococcus elongatus [TaxId: 32046]}
Probab=7.26 E-value=1.5e+02 Score=14.34 Aligned_cols=19 Identities=21% Similarity=0.284 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHhHHhh
Q 037145 120 NLKVALSSAAMVWVKILQI 138 (155)
Q Consensus 120 ~l~i~~i~~~~~~~~~~~I 138 (155)
+++++++|.++.|-.+..+
T Consensus 11 alvial~pg~lafrlatel 29 (31)
T d1jb0m_ 11 ALVIALLPAVLAFRLSTEL 29 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 5566777777777665543
No 5
>d2yvxa3 f.57.1.1 (A:276-448) Mg2+ transporter MgtE {Thermus thermophilus [TaxId: 274]}
Probab=6.77 E-value=3.3e+02 Score=18.09 Aligned_cols=22 Identities=23% Similarity=0.309 Sum_probs=14.9
Q ss_pred HHHHHhHHhhhhhhccCCchhhhc
Q 037145 129 AMVWVKILQIDNLEQRGSDPIEFN 152 (155)
Q Consensus 129 ~~~~~~~~~I~~L~l~g~~~~v~~ 152 (155)
.+.-.+.+-+ ++-+|.||.+.-
T Consensus 127 ~~~G~~lPll--l~klg~DPA~aS 148 (173)
T d2yvxa3 127 NLVGAMLPFL--LRRLGVDPALVS 148 (173)
T ss_dssp HHHHHHHHHH--HHHTSCCGGGSC
T ss_pred HHHHHHHHHH--HHHhCCChhhhh
Confidence 3334455777 888899997753
No 6
>d2elca1 a.46.2.1 (A:1-52) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]}
Probab=5.83 E-value=2.2e+02 Score=14.94 Aligned_cols=24 Identities=25% Similarity=0.439 Sum_probs=18.1
Q ss_pred HHHHHHHHHhccCChhhHHHHHHH
Q 037145 65 AIPLVSVMFAGHLGDLELAGATLA 88 (155)
Q Consensus 65 ~~~~vDtimvG~LG~~aLAAv~la 88 (155)
+..+++.+|=|.+.+..+||.=.+
T Consensus 18 a~~~~~~im~G~~~~~qiaafL~a 41 (52)
T d2elca1 18 AYEVMRALMAGEVSPVRAAGLLVA 41 (52)
T ss_dssp HHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHH
Confidence 456778889999998888875443
No 7
>d1brwa1 a.46.2.1 (A:1-70) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=5.03 E-value=2.3e+02 Score=15.54 Aligned_cols=23 Identities=13% Similarity=0.186 Sum_probs=17.5
Q ss_pred HHHHHHHHHhccCChhhHHHHHH
Q 037145 65 AIPLVSVMFAGHLGDLELAGATL 87 (155)
Q Consensus 65 ~~~~vDtimvG~LG~~aLAAv~l 87 (155)
+..+++.++-|++++..++|.=.
T Consensus 21 ~~~~~~~i~~g~~s~~qi~afL~ 43 (70)
T d1brwa1 21 IEWIVRGYTNGDIPDYQMSALAM 43 (70)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHH
Confidence 45678888999999988876544
No 8
>d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]}
Probab=4.68 E-value=3e+02 Score=14.89 Aligned_cols=24 Identities=29% Similarity=0.451 Sum_probs=18.6
Q ss_pred HHHHHHHHHhccCChhhHHHHHHH
Q 037145 65 AIPLVSVMFAGHLGDLELAGATLA 88 (155)
Q Consensus 65 ~~~~vDtimvG~LG~~aLAAv~la 88 (155)
+..++|.++-|++.+..+||.=.+
T Consensus 20 ~~~~~~~i~~g~~~d~qiaafL~a 43 (69)
T d1khda1 20 SHQLFAAIVRGELEDSQLAAALIS 43 (69)
T ss_dssp HHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHH
Confidence 566788899999999888876544
No 9
>d1ppjg_ f.23.13.1 (G:) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Cow (Bos taurus) [TaxId: 9913]}
Probab=4.54 E-value=3.6e+02 Score=15.60 Aligned_cols=21 Identities=10% Similarity=0.151 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 037145 43 VEEAKNQVLFSLPMIVANVSY 63 (155)
Q Consensus 43 ~~e~k~ll~lalPiil~~ll~ 63 (155)
|+-...++..+.|.++..++.
T Consensus 39 RR~~~~~l~v~PPfi~~Y~iy 59 (75)
T d1ppjg_ 39 RRTRACILRVAPPFVAFYLVY 59 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHhceEEcCHHHHHHHHH
Confidence 445566899999999887764
No 10
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]}
Probab=3.52 E-value=1.5e+02 Score=21.37 Aligned_cols=53 Identities=19% Similarity=0.117 Sum_probs=31.8
Q ss_pred CcCCCCCCCCCCCCchhhhhhhhhhhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CChhhHHHHHH
Q 037145 14 LLGTGDNINNYNLGEEERRWCRKWKEVLDVEEAKNQVLFSLPMIVANVSYYAIPLVSVMFAGH--LGDLELAGATL 87 (155)
Q Consensus 14 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~k~ll~lalPiil~~ll~~~~~~vDtimvG~--LG~~aLAAv~l 87 (155)
.-+||+=.+++++.|.-+...-.. +-.--...+.+|.++||. .++.++.+++-
T Consensus 186 ~rGPwpl~eGLPTLE~HR~~~~~~---------------------~a~~L~~~g~iD~V~IGd~~~S~~el~~l~~ 240 (244)
T d1x7fa2 186 NIGPWDINDGLCTLEEHRNLPIEV---------------------QAKHLWATGLIDDVIIGNAYASEEELEKLGN 240 (244)
T ss_dssp CBCSSSCCSCCBSBGGGTTSCHHH---------------------HHHHHHHTTSCCEEEECSBCCCHHHHHHHHH
T ss_pred cCCCccccCCCCchHHhcCCCHHH---------------------HHHHHHhcCCCCEEEEcCCCCCHHHHHHHHh
Confidence 456777777777777765542111 111113445689999999 46667777653
Done!