BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037148
(463 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FT92|Y5843_ARATH Uncharacterized protein At5g08430 OS=Arabidopsis thaliana
GN=At5g08430 PE=1 SV=2
Length = 553
Score = 262 bits (669), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 196/307 (63%), Gaps = 22/307 (7%)
Query: 150 KVKSSRKEFVGWGSRPLLEFLASIGKDTTRELSDDAITTIISGYCKENKLFHPERKRKII 209
K + R EFVGWGSR L+EFL S+GKDT+ +S ++ I+ Y + L P K+K++
Sbjct: 21 KARPKRFEFVGWGSRQLIEFLHSLGKDTSEMISRYDVSDTIAKYISKEGLLDPSNKKKVV 80
Query: 210 CDARLKALFGRKSVNKNSIPKLLTIHLAENLELLEEEFGSCSEIEVEEDLEACKRQSNSV 269
CD RL LFG +++ + + LL H EN + + +F E E
Sbjct: 81 CDKRLVLLFGTRTIFRMKVYDLLEKHYKENQD--DSDFDFLYEDE--------------- 123
Query: 270 KRSYTKEVVGDAQKNSHTKEVVMNVQESCFASVVPKNIKLVYLRKSLVEELSKQLETFEA 329
+++ ++K + V+ FA++V NIKL+YLRKSLV+EL K +TFE
Sbjct: 124 -----PQIICHSEKIAKRTSKVVKKPRGTFAAIVSDNIKLLYLRKSLVQELLKSPDTFEG 178
Query: 330 KVMGSFVRVRSDPNDYLQKNSHQLVQVSGIHKTSVNAEILLELSDRVKWVPICNLSNDDF 389
K++GSFVR++SDPNDYLQK +QLVQV+G+ K + LL++++ VK V I LS+D+F
Sbjct: 179 KMLGSFVRIKSDPNDYLQKYPYQLVQVTGVKKEHGTDDFLLQVTNYVKDVSISVLSDDNF 238
Query: 390 SEEECEDLRQRVKNGLASRPTVVELRQKAVCLHEDITKHWIARELDILRKCVDRANEKGW 449
S+EECEDL QR+KNGL +PT+VE+ +KA LH+D TKHW+ RE+++L++ +DRANEKGW
Sbjct: 239 SQEECEDLHQRIKNGLLKKPTIVEMEEKAKKLHKDQTKHWLGREIELLKRLIDRANEKGW 298
Query: 450 RRQYPSF 456
RR+ +
Sbjct: 299 RRELSEY 305
>sp|Q9SIV5|C3H19_ARATH Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis thaliana
GN=NERD PE=1 SV=3
Length = 1773
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 140/467 (29%), Positives = 235/467 (50%), Gaps = 25/467 (5%)
Query: 5 HACYECGKAPKFYCLCSPKAICGHCICDAEFAIVKGNKGLCSGCLELVLLIEENKDVDSH 64
H C +C K + C ++C C DA F ++GNKGLC C+E V LIE K +
Sbjct: 646 HLCSKCEKTATYLCYTCMFSLCKGCAKDAVFFCIRGNKGLCETCMETVKLIER-KQQEKE 704
Query: 65 GCKIDFSDPENSY---FYEYWQIIKDKERLTSEQVISAYNRLKSGELYSG----ASDSFE 117
++DF+D + S+ F +YW +K + L+ E++ A LK E + AS++
Sbjct: 705 PAQLDFND-KTSWEYLFKDYWIDLKTQLSLSPEELDQAKRPLKGHETNASKQGTASETDY 763
Query: 118 SDEGKDDSDESEDDSQIRKRKRSKGKVSVANSKVKSSRKEFVGWGSRPLLEFLASIGKDT 177
+G DSD S + R R +S + +S K+ E + W S+ LL+ + + +
Sbjct: 764 VTDGGSDSDSSPKKRKTRSRSKSGSAEKILSSGDKNLSDETMEWASKELLDLVVHMRRGD 823
Query: 178 TRELSDDAITTIISGYCKENKLFHPERKRKIICDARLKALFGRKSVNKNSIPKLLTIHLA 237
L + T++ Y K L P RK ++ICD+RL+ LFG+ V + LL H
Sbjct: 824 RSFLPMLEVQTLLLAYIKRYNLRDPRRKSQVICDSRLQNLFGKSHVGHFEMLNLLDSHFL 883
Query: 238 ENLELLEEEF-GSCSEIEVEEDLEACKRQSNSVKRSYTKEVVGDAQKNSHTKEVVMNVQE 296
+ + ++ G + E ++ + + VK K+ + ++ ++
Sbjct: 884 KKEQNQADDIQGDIVDTEEPNHVDVDENLDHPVKSGKDKKRKTRKKNVRKGRQSNLD--- 940
Query: 297 SCFASVVPKNIKLVYLRKSLVEELSKQLETFEAKVMGSFVRVRSDPNDYLQKNSHQLVQV 356
FA+V NI L+YLR+SLVE+L + FE KV +FVR+R N +++ ++LVQV
Sbjct: 941 -DFAAVDMHNINLIYLRRSLVEDLLEDSTAFEEKVASAFVRLRISGNQ--KQDLYRLVQV 997
Query: 357 SGIHKTS-------VNAEILLEL--SDRVKWVPICNLSNDDFSEEECEDLRQRVKNGLAS 407
G K + +LE+ D+ + + I +SN DF+E+EC+ L+Q +K GL +
Sbjct: 998 VGTSKAPEPYKVGKKTTDYVLEILNLDKTEVISIDIISNQDFTEDECKRLKQSIKCGLIN 1057
Query: 408 RPTVVELRQKAVCLHEDITKHWIARELDILRKCVDRANEKGWRRQYP 454
R TV ++++KA+ L E K+ + E+ DRA++ G R++YP
Sbjct: 1058 RLTVGDIQEKAIALQEVRVKNLLEAEILRFSHLRDRASDMGRRKEYP 1104
>sp|Q9SD34|C3H44_ARATH Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis
thaliana GN=At3g51120 PE=2 SV=3
Length = 1292
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 214/465 (46%), Gaps = 42/465 (9%)
Query: 5 HACYECGKAPKFYCLCSPKAICGHCICDAEFAIVKGNKGLCSGCLELVLLIEENKDVDSH 64
H C C KA + C ++C CI DA++ IV+GN GLC C++ ++LIE D+
Sbjct: 157 HICGTCQKASSYMCYTCTFSVCKRCIKDADYVIVRGNMGLCGTCIKPIMLIENIAQGDNE 216
Query: 65 GCKIDFSDPEN-SYFYE-YWQIIKDKERLTSEQVISAYNRLKSGELYSGASDSFESDEGK 122
K+DF D + Y ++ YW +K++ LT +++ A N K + ES
Sbjct: 217 AVKVDFDDKLSWEYLFKVYWLCLKEELSLTVDELTRANNPWKE---VPNTAPKVESQNDH 273
Query: 123 DDSDESEDDSQIRKRKRSKGKVSVAN-------SKVKSSRKEFVGWGSRPLLEFLASIGK 175
++ + KR+R+ ++ N S + W ++ LLEF++ +
Sbjct: 274 TNNRALDVAVNGTKRRRTSDSPTLPNKLDGKNPSNILKKAPGDTSWATKELLEFVSFMKN 333
Query: 176 DTTRELSDDAITTIISGYCKENKLFHPERKRKIICDARLKALFGRKSVNKNSIPKLLTIH 235
T LS + ++ Y K+ L P +K +++CD L LFG++ V + KLL H
Sbjct: 334 GDTSVLSQFDVQGLLLDYIKKKNLRDPLQKSQVLCDQMLVKLFGKQRVGHFEMLKLLESH 393
Query: 236 LAENLELLEEEFGSCSEIEVEEDLEACKRQSNSVKRSYTKEVVGDAQ-------KNSHTK 288
+ L++E+ E +++V ++ V D T
Sbjct: 394 V-----LIQEKPKGAKTTNGE--------TTHAVPSQIEEDSVHDPMVRDRRRKMRRKTD 440
Query: 289 EVVMNVQESCFASVVPKNIKLVYLRKSLVEELSKQLETFEAKVMGSFVRVRSDPNDYLQK 348
V N +A++ NI L+YLR+ +E L + + KV+G+ +R++ +D +
Sbjct: 441 GRVQNENLDAYAAIDVHNINLIYLRRKFLESLLDDINKVDEKVVGTILRIKVSGSDQ-KL 499
Query: 349 NSHQLVQVSGIHKT-------SVNAEILLEL--SDRVKWVPICNLSNDDFSEEECEDLRQ 399
+ H+LVQV G K + +++LE+ D+ + + I LS+ + +E+EC+ LRQ
Sbjct: 500 DIHRLVQVVGTSKAIASYQLGAKTTDVMLEILNLDKREVISIDQLSDQNITEDECKRLRQ 559
Query: 400 RVKNGLASRPTVVELRQKAVCLHEDITKHWIARELDILRKCVDRA 444
+K GL R TVV++ + A L + E+ L DRA
Sbjct: 560 SIKCGLNKRLTVVDILKTAATLQAMRINEALEAEILKLNHLRDRA 604
>sp|Q05024|TRI1_YEAST Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TRI1 PE=1 SV=1
Length = 226
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 163 SRPLLEFLASIGKDTTRELSDDAITTIISGYCKENKLFHPERKRKIICDARLKALFGRKS 222
S PL +FL S EL + +I Y KE+ L +P+ +R+I+CD +++ +FG+K
Sbjct: 127 SAPLQKFLGS------EELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGKK- 179
Query: 223 VNKNSIPKLLTIHLAENLELL--EEEFGSCSEIEV 255
+ S+ KLLT HL E++ EEE E E+
Sbjct: 180 MTMFSMNKLLTKHLFNPDEIVKHEEEQKQTPEKEI 214
>sp|Q91FL8|VF306_IIV6 Putative SWIB domain-containing protein 306R OS=Invertebrate
iridescent virus 6 GN=IIV6-306R PE=3 SV=1
Length = 312
Score = 38.9 bits (89), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 157 EFVGWGSRPLLEFL-------ASIGKD---TTRELSDDAITTIISGYCKENKLFHPERKR 206
E + S L++F +SIG + TT +S D + I S Y +EN L KR
Sbjct: 228 ELTLYPSEELIKFYDEHSKQSSSIGTNKWCTTSLISWDDVNKIFSDYIRENSLKDTVNKR 287
Query: 207 KIICDARLKALFGRKS 222
KII D LK+LF +S
Sbjct: 288 KIILDDNLKSLFKSRS 303
>sp|Q08747|UAF30_YEAST Upstream activation factor subunit UAF30 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UAF30 PE=1
SV=1
Length = 228
Score = 38.9 bits (89), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 30/183 (16%)
Query: 60 DVDSHGCKIDFSDPENSYFYEYWQIIKDKERLTSEQVISAYNRLKSGELYSGASDSFESD 119
DV+S G I N ++ ++K++ R + R L A+ + E
Sbjct: 39 DVESQGKAI------NKLIRKHLDLVKERPR---------FERSLEDLLKENATLAIELT 83
Query: 120 E----GKDDSDESEDDSQIRKRKRSKGKVSVANSKVKSSRKEFVGWGSRPLLEFLASIGK 175
+ K S E ++DS+ + K K +V+ S + S+RK + S+ L L
Sbjct: 84 KEITVSKRSSGEEKNDSETKGTHVEKKKGTVSKSPI-STRKVTL---SKSLASLLGE--- 136
Query: 176 DTTRELSDDAITTIISGYCKENKLFHPERKRKIICDARLKALFGRKSVNKNSIPKLLTIH 235
EL+ + + Y K + L +P K++I+CD +L+ + G KS N + K+L H
Sbjct: 137 ---HELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG-KSTNMFEMHKILASH 192
Query: 236 LAE 238
+ E
Sbjct: 193 MTE 195
>sp|Q556Z0|SNF12_DICDI SWI/SNF complex component SNF12 homolog OS=Dictyostelium discoideum
GN=snf12-1 PE=3 SV=1
Length = 456
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 193 YCKENKLFHPERKRKIICDARLKALFGRKSVNKNSIPKLLTIHLA 237
Y K N L E K KI CD LK +F + + N IP+LL HL+
Sbjct: 266 YIKSNTLLDAETK-KITCDENLKNIFSLEELQFNQIPQLLREHLS 309
>sp|Q5UQ74|YR508_MIMIV Putative SWIB domain-containing protein R508 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_R508 PE=4 SV=1
Length = 335
Score = 36.2 bits (82), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 181 LSDDAITTIISGYCKENKLFHPERKRKIICDARLKALFGRK 221
LS +T ++ Y +NK+++ + KR+II ++++K LFG K
Sbjct: 266 LSRSKVTELMYKYFTDNKMYNSKTKREIIPNSKIKKLFGMK 306
>sp|Q6RFY2|PHAR3_RAT Phosphatase and actin regulator 3 OS=Rattus norvegicus GN=Phactr3
PE=2 SV=1
Length = 517
Score = 36.2 bits (82), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 336 VRVRSDPNDYLQKNSHQLVQVSGIHKTSVNAEILLELSDRVKWVP---------ICNLSN 386
V++R+ P+ ++ + + + + + +I ++LS R+ P I N
Sbjct: 363 VKLRNRPSKQELEDRNIFPRRTDEERQEIRQQIEMKLSKRLSQRPAVEELERRNILKQRN 422
Query: 387 DDFSEEECEDLRQRVKNGLASRPTVVELRQKAVCLH-EDITKHWIARELDILRKCVDRAN 445
D +EE +++QR+ L RPTV ELR + + + D + +AR D DR
Sbjct: 423 DQTEQEERREIKQRLTRKLNQRPTVDELRDRKILIRFSDYVE--VARAQD-----YDRRA 475
Query: 446 EKGWRR 451
+K W R
Sbjct: 476 DKPWTR 481
>sp|Q90839|DKK3_CHICK Dickkopf-related protein 3 OS=Gallus gallus GN=DKK3 PE=2 SV=1
Length = 350
Score = 36.2 bits (82), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 262 CKRQSNSVKRSYTKEVVGDAQKNSHTKEVVMNVQESCFASVVPKNIKLVYLRKSLVEELS 321
C+ QS+ S + + +KN KE +N+ E F S++P++I Y S+++E+
Sbjct: 265 CQPQSSHSTTSVCELSSNETRKNE--KEDPLNMDEMPFISLIPRDILSDYEESSVIQEVR 322
Query: 322 KQLETFEAKVMGSFVRVRSDP 342
K+LE+ E + + V+ DP
Sbjct: 323 KELESLEDQ---AGVKSEHDP 340
>sp|Q8BYK5|PHAR3_MOUSE Phosphatase and actin regulator 3 OS=Mus musculus GN=Phactr3 PE=1
SV=2
Length = 558
Score = 36.2 bits (82), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 336 VRVRSDPNDYLQKNSHQLVQVSGIHKTSVNAEILLELSDRVKWVP---------ICNLSN 386
V++R+ P+ ++ + + + + + +I ++LS R+ P I N
Sbjct: 404 VKLRNRPSKQELEDRNIFPRRTDEERQEIRQQIEMKLSKRLSQRPAVEELERRNILKQRN 463
Query: 387 DDFSEEECEDLRQRVKNGLASRPTVVELRQKAVCLH-EDITKHWIARELDILRKCVDRAN 445
D +EE +++QR+ L RPTV ELR + + + D + +AR D DR
Sbjct: 464 DQTEQEERREIKQRLTRKLNQRPTVDELRDRKILIRFSDYVE--VARAQDY-----DRRA 516
Query: 446 EKGWRR 451
+K W R
Sbjct: 517 DKPWTR 522
>sp|Q96KR7|PHAR3_HUMAN Phosphatase and actin regulator 3 OS=Homo sapiens GN=PHACTR3 PE=1
SV=1
Length = 559
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 336 VRVRSDPNDYLQKNSHQLVQVSGIHKTSVNAEILLELSDRVKWVP---------ICNLSN 386
V++R+ P+ ++ + + + + + +I ++LS R+ P I N
Sbjct: 405 VKLRNRPSKQELEDRNIFPRRTDEERQEIRQQIEMKLSKRLSQRPAVEELERRNILKQRN 464
Query: 387 DDFSEEECEDLRQRVKNGLASRPTVVELRQKAVCLH 422
D +EE +++QR+ L RPTV ELR + + +
Sbjct: 465 DQTEQEERREIKQRLTRKLNQRPTVDELRDRKILIR 500
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,722,286
Number of Sequences: 539616
Number of extensions: 7048599
Number of successful extensions: 31425
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 31100
Number of HSP's gapped (non-prelim): 336
length of query: 463
length of database: 191,569,459
effective HSP length: 121
effective length of query: 342
effective length of database: 126,275,923
effective search space: 43186365666
effective search space used: 43186365666
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)