BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037158
(155 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1QKI|A Chain A, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|B Chain B, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|C Chain C, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|D Chain D, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|E Chain E, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|F Chain F, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|G Chain G, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|H Chain H, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
Length = 514
Score = 96.7 bits (239), Expect = 4e-21, Method: Composition-based stats.
Identities = 60/178 (33%), Positives = 95/178 (53%), Gaps = 29/178 (16%)
Query: 1 LEPSNAILGQY--------KATSG--DNVDVKLNSLPPLYFDVVLHIDNASCDGVPFLIK 50
++ +N +LGQY +AT G D+ V S + VVL+++N DGVPF+++
Sbjct: 297 VQANNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILR 356
Query: 51 AGTGLIRHR---YVQFLHVLGNIYNERFGHNFDLATNELILRNVPDDAILVRVNNKVPGL 107
G L + +QF V G+I++++ NEL++R P++A+ ++ K PG+
Sbjct: 357 CGKALNERKAEVRLQFHDVAGDIFHQQ------CKRNELVIRVQPNEAVYTKMMTKKPGM 410
Query: 108 GLQLDASELNL----------VPDSYEHLLLDVINGDNHLFMRSDELTAAWNILNPVL 155
+ SEL+L +PD+YE L+LDV G F+RSDEL AW I P+L
Sbjct: 411 FFNPEESELDLTYGNRYKNVKLPDAYERLILDVFCGSQMHFVRSDELLEAWRIFTPLL 468
>pdb|2BH9|A Chain A, X-Ray Structure Of A Deletion Variant Of Human Glucose 6-
Phosphate Dehydrogenase Complexed With Structural And
Coenzyme Nadp
pdb|2BHL|A Chain A, X-Ray Structure Of Human Glucose-6-Phosphate Dehydrogenase
(Deletion Variant) Complexed With Glucose-6-Phosphate
pdb|2BHL|B Chain B, X-Ray Structure Of Human Glucose-6-Phosphate Dehydrogenase
(Deletion Variant) Complexed With Glucose-6-Phosphate
Length = 489
Score = 96.7 bits (239), Expect = 5e-21, Method: Composition-based stats.
Identities = 60/178 (33%), Positives = 95/178 (53%), Gaps = 29/178 (16%)
Query: 1 LEPSNAILGQY--------KATSG--DNVDVKLNSLPPLYFDVVLHIDNASCDGVPFLIK 50
++ +N +LGQY +AT G D+ V S + VVL+++N DGVPF+++
Sbjct: 272 VQANNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILR 331
Query: 51 AGTGLIRHR---YVQFLHVLGNIYNERFGHNFDLATNELILRNVPDDAILVRVNNKVPGL 107
G L + +QF V G+I++++ NEL++R P++A+ ++ K PG+
Sbjct: 332 CGKALNERKAEVRLQFHDVAGDIFHQQ------CKRNELVIRVQPNEAVYTKMMTKKPGM 385
Query: 108 GLQLDASELNL----------VPDSYEHLLLDVINGDNHLFMRSDELTAAWNILNPVL 155
+ SEL+L +PD+YE L+LDV G F+RSDEL AW I P+L
Sbjct: 386 FFNPEESELDLTYGNRYKNVKLPDAYERLILDVFCGSQMHFVRSDELREAWRIFTPLL 443
>pdb|4E9I|A Chain A, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|B Chain B, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|C Chain C, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|D Chain D, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4EM5|A Chain A, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|B Chain B, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|C Chain C, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|D Chain D, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
Length = 541
Score = 81.6 bits (200), Expect = 1e-16, Method: Composition-based stats.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 20/169 (11%)
Query: 3 PSNAILGQYKATSG-------DNVDVKLNSLPPLYFDVVLHIDNASCDGVPFLIKAGTGL 55
P+ +LGQY A++ D+ V S P + + LH++N GVPF+I+AG L
Sbjct: 332 PAECVLGQYTASADGSTPGYLDDPSVPKGSHCPTFAVLRLHVNNDRWHGVPFIIRAGKAL 391
Query: 56 IRHRYVQFLHVLGNIYNERFGHNFDLATNELILRNVPDDAILVRVNNKVPGLGLQLDASE 115
+ L + +E NEL++R P +A+ +++ K PGL +E
Sbjct: 392 EE----RLLDIRIQFKDEIRPFGESTQRNELVIRAQPSEAMYLKLTAKTPGLLNDTHQTE 447
Query: 116 LNL---------VPDSYEHLLLDVINGDNHLFMRSDELTAAWNILNPVL 155
L+L +PD+YE L+ + + G++ F+R DEL AAW I P+L
Sbjct: 448 LDLTYERRYDVTLPDAYESLIHEALLGNSTNFVRVDELDAAWRIYTPLL 496
>pdb|1E77|A Chain A, Complex Of Active Mutant (Q365->c) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides With
Substrate
pdb|1H9A|A Chain A, Complex Of Active Mutant (Q365->c) Of Glucose 6-Phosphate
Dehydrogenase From L. Mesenteroides With Coenzyme Nadp
pdb|1H9B|A Chain A, Active Mutant (Q365->c) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides
Length = 485
Score = 35.0 bits (79), Expect = 0.015, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 11/147 (7%)
Query: 17 DNVDVKLNSLPPLYFDVVLHIDNASCDGVPFLIKAGTGLIRHRYVQFLHVLGNIYNERFG 76
+ +DV +S + L D +GVPF +++G L + + +N FG
Sbjct: 302 EELDVPADSKNNTFIAGELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFKAGTFN--FG 359
Query: 77 HNFDLATNELILRNVPDDAILVRVNNK---------VPGLGLQLDASELNLVPDSYEHLL 127
+ L + P AI +++N K LG + + P+ YE ++
Sbjct: 360 SEQEACEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTIDLGWTVSDEDKKNTPEPYERMI 419
Query: 128 LDVINGDNHLFMRSDELTAAWNILNPV 154
D +NGD F + ++ AW ++ +
Sbjct: 420 HDTMNGDGSNFADWNGVSIAWKFVDAI 446
>pdb|1DPG|A Chain A, Glucose 6-Phosphate Dehydrogenase From Leuconostoc
Mesenteroides
pdb|1DPG|B Chain B, Glucose 6-Phosphate Dehydrogenase From Leuconostoc
Mesenteroides
Length = 485
Score = 35.0 bits (79), Expect = 0.017, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 11/147 (7%)
Query: 17 DNVDVKLNSLPPLYFDVVLHIDNASCDGVPFLIKAGTGLIRHRYVQFLHVLGNIYNERFG 76
+ +DV +S + L D +GVPF +++G L + + +N FG
Sbjct: 302 EELDVPADSKNNTFIAGELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFKAGTFN--FG 359
Query: 77 HNFDLATNELILRNVPDDAILVRVNNK---------VPGLGLQLDASELNLVPDSYEHLL 127
+ L + P AI +++N K LG + + P+ YE ++
Sbjct: 360 SEQEAQEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTIDLGWTVSDEDKKNTPEPYERMI 419
Query: 128 LDVINGDNHLFMRSDELTAAWNILNPV 154
D +NGD F + ++ AW ++ +
Sbjct: 420 HDTMNGDGSNFADWNGVSIAWKFVDAI 446
>pdb|1H93|A Chain A, Active Mutant (S215->c) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides
pdb|1H94|A Chain A, Complex Of Active Mutant (S215->c) Of Glucose 6-Phosphate
Dehydrogenase From L.Mesenteroides With Coenzyme Nad
Length = 485
Score = 35.0 bits (79), Expect = 0.017, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 11/147 (7%)
Query: 17 DNVDVKLNSLPPLYFDVVLHIDNASCDGVPFLIKAGTGLIRHRYVQFLHVLGNIYNERFG 76
+ +DV +S + L D +GVPF +++G L + + +N FG
Sbjct: 302 EELDVPADSKNNTFIAGELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFKAGTFN--FG 359
Query: 77 HNFDLATNELILRNVPDDAILVRVNNK---------VPGLGLQLDASELNLVPDSYEHLL 127
+ L + P AI +++N K LG + + P+ YE ++
Sbjct: 360 SEQEAQEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTIDLGWTVSDEDKKNTPEPYERMI 419
Query: 128 LDVINGDNHLFMRSDELTAAWNILNPV 154
D +NGD F + ++ AW ++ +
Sbjct: 420 HDTMNGDGSNFADWNGVSIAWKFVDAI 446
>pdb|1E7M|A Chain A, Active Site Mutant (D177->n) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides
pdb|1E7Y|A Chain A, Active Site Mutant (D177->n) Of Glucose 6-Phosphate
Dehydrogenase From Leuconostoc Mesenteroides Complexed
With Substrate And Nadph
Length = 485
Score = 35.0 bits (79), Expect = 0.017, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 11/147 (7%)
Query: 17 DNVDVKLNSLPPLYFDVVLHIDNASCDGVPFLIKAGTGLIRHRYVQFLHVLGNIYNERFG 76
+ +DV +S + L D +GVPF +++G L + + +N FG
Sbjct: 302 EELDVPADSKNNTFIAGELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFKAGTFN--FG 359
Query: 77 HNFDLATNELILRNVPDDAILVRVNNK---------VPGLGLQLDASELNLVPDSYEHLL 127
+ L + P AI +++N K LG + + P+ YE ++
Sbjct: 360 SEQEAQEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTIDLGWTVSDEDKKNTPEPYERMI 419
Query: 128 LDVINGDNHLFMRSDELTAAWNILNPV 154
D +NGD F + ++ AW ++ +
Sbjct: 420 HDTMNGDGSNFADWNGVSIAWKFVDAI 446
>pdb|2DPG|A Chain A, Complex Of Inactive Mutant (H240->n) Of Glucose
6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides
With Nadp+
Length = 485
Score = 35.0 bits (79), Expect = 0.018, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 11/147 (7%)
Query: 17 DNVDVKLNSLPPLYFDVVLHIDNASCDGVPFLIKAGTGLIRHRYVQFLHVLGNIYNERFG 76
+ +DV +S + L D +GVPF +++G L + + +N FG
Sbjct: 302 EELDVPADSKNNTFIAGELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFKAGTFN--FG 359
Query: 77 HNFDLATNELILRNVPDDAILVRVNNK---------VPGLGLQLDASELNLVPDSYEHLL 127
+ L + P AI +++N K LG + + P+ YE ++
Sbjct: 360 SEQEAQEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTIDLGWTVSDEDKKNTPEPYERMI 419
Query: 128 LDVINGDNHLFMRSDELTAAWNILNPV 154
D +NGD F + ++ AW ++ +
Sbjct: 420 HDTMNGDGSNFADWNGVSIAWKFVDAI 446
>pdb|3GR9|A Chain A, Crystal Structure Of Cold H188k S187n
pdb|3GR9|B Chain B, Crystal Structure Of Cold H188k S187n
pdb|3GR9|C Chain C, Crystal Structure Of Cold H188k S187n
pdb|3GR9|D Chain D, Crystal Structure Of Cold H188k S187n
pdb|3GR9|E Chain E, Crystal Structure Of Cold H188k S187n
pdb|3GR9|F Chain F, Crystal Structure Of Cold H188k S187n
pdb|3GR9|G Chain G, Crystal Structure Of Cold H188k S187n
pdb|3GR9|H Chain H, Crystal Structure Of Cold H188k S187n
Length = 390
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 30 YFDVVLHIDNASCDGVPFLIKAGTGLIRHRYVQFLHVLG 68
Y DV +S G F+IK +G+IR + V+ L+ G
Sbjct: 291 YLDVQQETGESSWFGFSFIIKKDSGVIRKQLVENLNSAG 329
>pdb|3B8X|A Chain A, Crystal Structure Of
Gdp-4-Keto-6-Deoxymannose-3-Dehydratase (Cold) H188n
Mutant With Bound Gdp-Perosamine
pdb|3B8X|B Chain B, Crystal Structure Of
Gdp-4-Keto-6-Deoxymannose-3-Dehydratase (Cold) H188n
Mutant With Bound Gdp-Perosamine
Length = 390
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 30 YFDVVLHIDNASCDGVPFLIKAGTGLIRHRYVQFLHVLG 68
Y DV +S G F+IK +G+IR + V+ L+ G
Sbjct: 291 YLDVQQETGESSWFGFSFIIKKDSGVIRKQLVENLNSAG 329
>pdb|2R0T|A Chain A, Crystal Sructure Of
Gdp-4-Keto-6-Deoxymannose-3-Dehydratase With A Trapped
Plp-Glutamate Geminal Diamine
pdb|2R0T|B Chain B, Crystal Sructure Of
Gdp-4-Keto-6-Deoxymannose-3-Dehydratase With A Trapped
Plp-Glutamate Geminal Diamine
Length = 390
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 30 YFDVVLHIDNASCDGVPFLIKAGTGLIRHRYVQFLHVLG 68
Y DV +S G F+IK +G+IR + V+ L+ G
Sbjct: 291 YLDVQQETGESSWFGFSFIIKKDSGVIRKQLVENLNSAG 329
>pdb|2GMS|A Chain A, E Coli Gdp-4-Keto-6-Deoxy-D-Mannose-3-Dehydratase With
Bound Hydrated Plp
pdb|2GMS|B Chain B, E Coli Gdp-4-Keto-6-Deoxy-D-Mannose-3-Dehydratase With
Bound Hydrated Plp
pdb|2GMU|A Chain A, Crystal Structure Of E Coli
Gdp-4-Keto-6-Deoxy-D-Mannose-3- Dehydratase Complexed
With Plp-Glutamate Ketimine Intermediate
pdb|2GMU|B Chain B, Crystal Structure Of E Coli
Gdp-4-Keto-6-Deoxy-D-Mannose-3- Dehydratase Complexed
With Plp-Glutamate Ketimine Intermediate
Length = 390
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 30 YFDVVLHIDNASCDGVPFLIKAGTGLIRHRYVQFLHVLG 68
Y DV +S G F+IK +G+IR + V+ L+ G
Sbjct: 291 YLDVQQETGESSWFGFSFIIKKDSGVIRKQLVENLNSAG 329
>pdb|3B1N|A Chain A, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Adp-Mizoribine
pdb|3B1N|B Chain B, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Adp-Mizoribine
pdb|3B1O|A Chain A, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Ligand-Free Form
pdb|3B1O|B Chain B, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Ligand-Free Form
pdb|3B1P|A Chain A, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Adp-Inosine
pdb|3B1Q|A Chain A, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Inosine
pdb|3B1Q|B Chain B, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Inosine
pdb|3B1Q|C Chain C, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Inosine
pdb|3B1Q|D Chain D, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Inosine
pdb|3B1Q|E Chain E, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Inosine
pdb|3B1Q|F Chain F, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Inosine
Length = 326
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 15 SGDNVDVKLNSLPPLYFD-VVLHIDNASCDGVPFLIKAGTGL 55
+G+ D+KL + P F +V H + + GVPF+ G GL
Sbjct: 130 AGEAKDIKLAIVGPDGFQGMVQHTEELAQAGVPFIFDPGQGL 171
>pdb|3B1R|A Chain A, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Amp-Mg-Amp
pdb|3B1R|B Chain B, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Amp-Mg-Amp
pdb|3B1R|C Chain C, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Amp-Mg-Amp
pdb|3B1R|D Chain D, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Amp-Mg-Amp
pdb|3B1R|E Chain E, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Amp-Mg-Amp
pdb|3B1R|F Chain F, Structure Of Burkholderia Thailandensis Nucleoside Kinase
(Bthnk) In Complex With Amp-Mg-Amp
Length = 320
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 15 SGDNVDVKLNSLPPLYFD-VVLHIDNASCDGVPFLIKAGTGL 55
+G+ D+KL + P F +V H + + GVPF+ G GL
Sbjct: 138 AGEAKDIKLAIVGPDGFQGMVQHTEELAQAGVPFIFDPGQGL 179
>pdb|2C49|A Chain A, Crystal Structure Of Methanocaldococcus Jannaschii
Nucleoside Kinase - An Archaeal Member Of The Ribokinase
Family
pdb|2C49|B Chain B, Crystal Structure Of Methanocaldococcus Jannaschii
Nucleoside Kinase - An Archaeal Member Of The Ribokinase
Family
pdb|2C4E|A Chain A, Crystal Structure Of Methanocaldococcus Jannaschii
Nucleoside Kinase - An Archaeal Member Of The Ribokinase
Family
Length = 302
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 119 VPDSYEHLLLDVINGDNHLFMRSDELTAAWNILN 152
+P + +LL++I N LFM E A N+LN
Sbjct: 165 LPQYSKEMLLEIIEHTNFLFMNKHEFERASNLLN 198
>pdb|2O95|A Chain A, Crystal Structure Of The Metal-Free Dimeric Human Mov34
Mpn Domain (Residues 1-186)
pdb|2O95|B Chain B, Crystal Structure Of The Metal-Free Dimeric Human Mov34
Mpn Domain (Residues 1-186)
Length = 187
Score = 26.2 bits (56), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 57 RHRYVQFLHVLGNIYNERFGHNFDLATNELILRNVPDDAILVRVNNKVPGLGLQLDA 113
R R V + H + H D+A NEL+ R P +++LV ++ K LGL +A
Sbjct: 89 RERIVGWYHTGPKL------HKNDIAINELMKRYCP-NSVLVIIDVKPKDLGLPTEA 138
>pdb|2O96|A Chain A, Crystal Structure Of The Metal-Free Dimeric Human Mov34
Mpn Domain (Residues 1-177)
pdb|2O96|B Chain B, Crystal Structure Of The Metal-Free Dimeric Human Mov34
Mpn Domain (Residues 1-177)
Length = 178
Score = 25.8 bits (55), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 57 RHRYVQFLHVLGNIYNERFGHNFDLATNELILRNVPDDAILVRVNNKVPGLGLQLDA 113
R R V + H + H D+A NEL+ R P +++LV ++ K LGL +A
Sbjct: 89 RERIVGWYHTGPKL------HKNDIAINELMKRYCP-NSVLVIIDVKPKDLGLPTEA 138
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.142 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,966,495
Number of Sequences: 62578
Number of extensions: 202600
Number of successful extensions: 418
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 394
Number of HSP's gapped (non-prelim): 21
length of query: 155
length of database: 14,973,337
effective HSP length: 91
effective length of query: 64
effective length of database: 9,278,739
effective search space: 593839296
effective search space used: 593839296
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)