Query 037158
Match_columns 155
No_of_seqs 108 out of 1046
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 15:38:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037158.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037158hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bh9_A G6PD, glucose-6-phospha 100.0 3.7E-60 1.2E-64 417.3 13.5 148 2-155 273-443 (489)
2 4e9i_A Glucose-6-phosphate 1-d 100.0 4.8E-60 1.7E-64 420.2 12.6 148 1-155 330-496 (541)
3 1dpg_A G6PD, glucose 6-phospha 100.0 1.1E-59 3.7E-64 414.3 12.5 147 4-155 282-447 (485)
4 1nnx_A Protein YGIW; structura 35.7 13 0.00046 26.0 1.3 16 32-47 63-78 (109)
5 3qoe_A Heterocyst differentiat 23.1 10 0.00035 30.5 -1.3 21 30-52 195-215 (302)
6 3ktp_B Trinucleotide repeat-co 22.7 21 0.00072 18.2 0.3 8 41-48 15-22 (22)
7 4ag4_A Epithelial discoidin do 22.3 1.9E+02 0.0065 23.9 6.2 66 29-103 254-326 (351)
8 2rkz_M Fibronectin-binding pro 20.0 24 0.00083 18.5 0.2 9 6-14 2-10 (26)
9 3q6k_A 43.2 kDa salivary prote 19.9 60 0.002 27.2 2.7 27 23-49 23-55 (381)
10 2xl1_A Arginine attenuator pep 17.6 42 0.0014 17.3 0.7 22 131-152 1-23 (26)
No 1
>2bh9_A G6PD, glucose-6-phosphate 1-dehydrogenase; oxidoreductase, oxidoreductase (CHOH(D)-NADP), carbohydrate metabolism, glucose metabolism; HET: NAP; 2.5A {Homo sapiens} PDB: 2bhl_A* 1qki_A*
Probab=100.00 E-value=3.7e-60 Score=417.31 Aligned_cols=148 Identities=39% Similarity=0.706 Sum_probs=138.3
Q ss_pred CCCceeeeccCC----------CCCCCCCCCCCCCCcceEEEEEEeeCCCcCCCceeeecccCCCCceE---EEeeccCc
Q 037158 2 EPSNAILGQYKA----------TSGDNVDVKLNSLPPLYFDVVLHIDNASCDGVPFLIKAGTGLIRHRY---VQFLHVLG 68 (155)
Q Consensus 2 ~~~~~v~GQY~~----------~y~~e~gV~~~S~TeTfaa~~l~Idn~RW~GVPF~lrtGK~L~~~~t---I~Fk~~~~ 68 (155)
+++++|||||.+ ||++|+||+++|+||||||++|+||||||+||||||||||+|+++.+ |+||++|+
T Consensus 273 ~~~~~VrGQY~~g~~~~g~~v~gY~~E~~V~~~S~TeTfaA~kl~IdN~RW~GVPFylRtGKrL~~r~teI~I~Fk~~p~ 352 (489)
T 2bh9_A 273 QANNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGKALNERKAEVRLQFHDVAG 352 (489)
T ss_dssp CGGGEEEEEEECCTTSCSTTSSCGGGCTTSCTTCCCCSEEEEEEEBCSTTTTTCEEEEEEESSCSSCEEEEEEEECCCSS
T ss_pred CccCeEEecccCCcCCCCCCCCCcccCCCCCCCCCCcceEEEEEEEcCcCcCCCCEEEEcCCCCCcceEEEEEEecCCCh
Confidence 567899999963 69999999999999999999999999999999999999999999999 99999999
Q ss_pred cccccccCCCCCCCCcEEEEEeCCCCcEEEEEEeeCCCCCcceeeecCCC----------CcchHHHHHHHHHcCCCCCC
Q 037158 69 NIYNERFGHNFDLATNELILRNVPDDAILVRVNNKVPGLGLQLDASELNL----------VPDSYEHLLLDVINGDNHLF 138 (155)
Q Consensus 69 ~~f~~~~~~~~~~~~n~Lvi~iqP~~~i~l~~~~k~pg~~~~~~~~~l~~----------~~~aYE~Ll~d~~~Gd~t~F 138 (155)
.+|.. .+.+|+|||+|||+++|+|++++|+||.++.+++++|++ .|+||||||+|||+||+|||
T Consensus 353 ~~f~~------~~~~N~LviriqP~e~i~l~~~~K~PG~~~~~~~~~ld~~~~~~~~~~~~p~aYErLllD~~~Gd~tlF 426 (489)
T 2bh9_A 353 DIFHQ------QCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESELDLTYGNRYKNVKLPDAYERLILDVFCGSQMHF 426 (489)
T ss_dssp CCSTT------CCCCCEEEEEEESSCEEEEEEEEECTTTCCSEEEEEEEEETTTSSSSSCCCCHHHHHHHHHHHTCCTTS
T ss_pred hhccc------CCCCCEEEEEeCCCCeEEEEEeccCCCCCCcceeeeEEEechhcccCCCCCchHHHHHHHHHcCChhcC
Confidence 99953 246899999999999999999999999999888887765 48999999999999999999
Q ss_pred CCHHHHHHhcccccccC
Q 037158 139 MRSDELTAAWNILNPVL 155 (155)
Q Consensus 139 ~~~deve~sWri~dpiL 155 (155)
+|+||||+||+|+||||
T Consensus 427 ~r~DEve~aW~ivdpil 443 (489)
T 2bh9_A 427 VRSDELREAWRIFTPLL 443 (489)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHhHHH
Confidence 99999999999999986
No 2
>4e9i_A Glucose-6-phosphate 1-dehydrogenase; pentose phosphate pathway, alpha beta, NAD(P) rossmann-like domain, oxidoreductase; 2.85A {Trypanosoma cruzi} PDB: 4em5_A*
Probab=100.00 E-value=4.8e-60 Score=420.24 Aligned_cols=148 Identities=36% Similarity=0.633 Sum_probs=139.3
Q ss_pred CCCCceeeeccCC-------CCCCCCCCCCCCCCcceEEEEEEeeCCCcCCCceeeecccCCCCceE---EEeeccCccc
Q 037158 1 LEPSNAILGQYKA-------TSGDNVDVKLNSLPPLYFDVVLHIDNASCDGVPFLIKAGTGLIRHRY---VQFLHVLGNI 70 (155)
Q Consensus 1 ~~~~~~v~GQY~~-------~y~~e~gV~~~S~TeTfaa~~l~Idn~RW~GVPF~lrtGK~L~~~~t---I~Fk~~~~~~ 70 (155)
++++++|||||.+ ||++|+||+++|+||||||++|+||||||+||||||||||+|+++.+ |+||++|+.+
T Consensus 330 i~~~~vVrGQY~~g~~g~v~gY~~e~gV~~~S~TeTfaA~kl~IdN~RW~GVPFyLRtGKrL~~r~tEI~I~FK~~p~~~ 409 (541)
T 4e9i_A 330 ANPAECVLGQYTASADGSTPGYLDDPSVPKGSHCPTFAVLRLHVNNDRWHGVPFIIRAGKALEERLLDIRIQFKDEIRPF 409 (541)
T ss_dssp CCTTSEEEEEEECCSSSSSCCGGGCTTSCTTCCCCSEEEEEEEBCSTTTTTCEEEEEEESSBSSCEEEEEEEECCCCTTT
T ss_pred CCccceEEccccCCCCCCCCCccCCCCCCCCCCCcccEEEEEEEcCcccCCCCEEEEccCCcCcceEEEEEEEecCChhh
Confidence 4578999999973 59999999999999999999999999999999999999999999999 8999999999
Q ss_pred cccccCCCCCCCCcEEEEEeCCCCcEEEEEEeeCCCCCcceeeecCCC---------CcchHHHHHHHHHcCCCCCCCCH
Q 037158 71 YNERFGHNFDLATNELILRNVPDDAILVRVNNKVPGLGLQLDASELNL---------VPDSYEHLLLDVINGDNHLFMRS 141 (155)
Q Consensus 71 f~~~~~~~~~~~~n~Lvi~iqP~~~i~l~~~~k~pg~~~~~~~~~l~~---------~~~aYE~Ll~d~~~Gd~t~F~~~ 141 (155)
|.. +.+|+|||+|||+|+|+|++++|+||.++.+++++|++ .|+||||||+|||+||+|||+|+
T Consensus 410 F~~-------~~~N~LviriQP~E~i~l~~~~K~PG~~~~~~~~~Ld~~y~~~~~~~~pdAYErLllD~~~Gd~tlF~r~ 482 (541)
T 4e9i_A 410 GES-------TQRNELVIRAQPSEAMYLKLTAKTPGLLNDTHQTELDLTYERRYDVTLPDAYESLIHEALLGNSTNFVRV 482 (541)
T ss_dssp GGG-------CCCCEEEEEEESSCEEEEEEEEECSSSCCCEEEEEEEEEHHHHCCCCCCCHHHHHHHHHHTTCGGGSBCH
T ss_pred cCC-------CCCCEEEEEECCCCeEEEEEeccCCCCCCceeeeeeeeecccccCCCCCCcHHHHHHHHHcCCcccCCCH
Confidence 962 36899999999999999999999999999998888775 68999999999999999999999
Q ss_pred HHHHHhcccccccC
Q 037158 142 DELTAAWNILNPVL 155 (155)
Q Consensus 142 deve~sWri~dpiL 155 (155)
||||+||||+||||
T Consensus 483 DEve~aW~ivdPiL 496 (541)
T 4e9i_A 483 DELDAAWRIYTPLL 496 (541)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999986
No 3
>1dpg_A G6PD, glucose 6-phosphate dehydrogenase; oxidoreductase, NADP/NAD, glucose metabolism, oxidoreductase (CHOH(D) - NAD(P)); 2.00A {Leuconostoc mesenteroides} SCOP: c.2.1.3 d.81.1.5 PDB: 1e7y_A* 1e7m_A* 1h93_A 1h94_A* 1h9a_A* 1e77_A* 1h9b_A 2dpg_A*
Probab=100.00 E-value=1.1e-59 Score=414.26 Aligned_cols=147 Identities=22% Similarity=0.373 Sum_probs=137.3
Q ss_pred CceeeeccCC-------CCCCCCCCCCCCCCcceEEEEEEeeCCCcCCCceeeecccCCCCceE---EEeeccCcccccc
Q 037158 4 SNAILGQYKA-------TSGDNVDVKLNSLPPLYFDVVLHIDNASCDGVPFLIKAGTGLIRHRY---VQFLHVLGNIYNE 73 (155)
Q Consensus 4 ~~~v~GQY~~-------~y~~e~gV~~~S~TeTfaa~~l~Idn~RW~GVPF~lrtGK~L~~~~t---I~Fk~~~~~~f~~ 73 (155)
+++|||||.+ ||++|+||+++|+||||||++|+||||||+||||||||||+|+++.+ |+||++|+. |..
T Consensus 282 ~~~VrGQY~~g~g~~v~gY~eE~gV~~~S~TeTfaA~kl~IdN~RW~GVPFyLRtGKrL~~r~teI~I~Fk~~p~~-f~~ 360 (485)
T 1dpg_A 282 KYFVRAQYGAGDSADFKPYLEELDVPADSKNNTFIAGELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFKAGTFN-FGS 360 (485)
T ss_dssp HHEEEEEECCCSSTTCCCGGGSTTCCTTCCCCSEEEEEECBCSGGGTTCCEEEEEESSBSSCEEEEEEEECCCCCC-CCS
T ss_pred cCeEEeccCCCCCCCCCCccCCCCCCCCCCCCceEEEEEEEcCCccCCccEEEEecCCcccceEEEEEEecCCCcC-cCc
Confidence 4679999984 69999999999999999999999999999999999999999999999 999999999 863
Q ss_pred ccCCCCCCCCcEEEEEeCCCCcEEEEEEeeCCCCCcceeeecCCC---------CcchHHHHHHHHHcCCCCCCCCHHHH
Q 037158 74 RFGHNFDLATNELILRNVPDDAILVRVNNKVPGLGLQLDASELNL---------VPDSYEHLLLDVINGDNHLFMRSDEL 144 (155)
Q Consensus 74 ~~~~~~~~~~n~Lvi~iqP~~~i~l~~~~k~pg~~~~~~~~~l~~---------~~~aYE~Ll~d~~~Gd~t~F~~~dev 144 (155)
. ..+.+|+|+|+|||+++|+|++++|+||.++.+++++|++ .|+||||||+|||+||+|||+|+|||
T Consensus 361 ~----~~~~~N~LviriqP~egi~l~~~~K~PG~~~~~~~~~ld~~~~~~~~~~~p~AYErLllD~~~Gd~tlF~r~DEv 436 (485)
T 1dpg_A 361 E----QEAQEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTIDLGWTVSDEDKKNTPEPYERMIHDTMNGDGSNFADWNGV 436 (485)
T ss_dssp S----SCCCCCEEEEEEESSCEEEEEEEEECSSSSCCEEEEEEEEECCHHHHHHCCCHHHHHHHHHHHTCCTTSBCHHHH
T ss_pred c----ccCCCCEEEEEECCCCeEEEEEEecCCCCCCceeeeeEEeecccccCCCCCCHHHHHHHHHhcCCcccCCChHHH
Confidence 1 1357999999999999999999999999999999888876 69999999999999999999999999
Q ss_pred HHhcccccccC
Q 037158 145 TAAWNILNPVL 155 (155)
Q Consensus 145 e~sWri~dpiL 155 (155)
|+||+|+||||
T Consensus 437 e~aW~ivdPil 447 (485)
T 1dpg_A 437 SIAWKFVDAIS 447 (485)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhHHH
Confidence 99999999986
No 4
>1nnx_A Protein YGIW; structural genomics, hypothetical protein, OB-fold, structure 2 function project, S2F, unknown function; 1.45A {Escherichia coli} SCOP: b.40.10.1
Probab=35.70 E-value=13 Score=26.03 Aligned_cols=16 Identities=25% Similarity=0.497 Sum_probs=14.5
Q ss_pred EEEEEeeCCCcCCCce
Q 037158 32 DVVLHIDNASCDGVPF 47 (155)
Q Consensus 32 a~~l~Idn~RW~GVPF 47 (155)
.+++.||+.+|.|.|+
T Consensus 63 ~I~VeId~~~w~g~~v 78 (109)
T 1nnx_A 63 TINVDIDHKRWNGVTV 78 (109)
T ss_dssp EEEEECCGGGSTTCCC
T ss_pred cEEEEEChhhcCCccc
Confidence 6899999999999886
No 5
>3qoe_A Heterocyst differentiation protein; MCSG, PSI biology, structural genomics, midwest center for S genomics, helix-turn-helix; 3.00A {Fischerella thermalis} PDB: 3qod_A
Probab=23.06 E-value=10 Score=30.52 Aligned_cols=21 Identities=33% Similarity=0.575 Sum_probs=14.9
Q ss_pred eEEEEEEeeCCCcCCCceeeecc
Q 037158 30 YFDVVLHIDNASCDGVPFLIKAG 52 (155)
Q Consensus 30 faa~~l~Idn~RW~GVPF~lrtG 52 (155)
|+.-+..||++ | |.|||.-|-
T Consensus 195 ysgTVtridsp-w-GmPfYaLtr 215 (302)
T 3qoe_A 195 YSGTVTRIDSP-W-GMPFYALTR 215 (302)
T ss_dssp TTTSCCCBCCS-S-SCCEECCCC
T ss_pred hccceEeecCC-C-CCcceeeec
Confidence 44445678887 6 999997664
No 6
>3ktp_B Trinucleotide repeat-containing gene 6C protein; protein-protein complex, methylation, mRNA processing, mRNA nucleus, phosphoprotein, RNA-binding; 1.50A {Homo sapiens}
Probab=22.71 E-value=21 Score=18.19 Aligned_cols=8 Identities=13% Similarity=0.326 Sum_probs=5.7
Q ss_pred CcCCCcee....
Q 037158 41 SCDGVPFL.... 48 (155)
Q Consensus 41 RW~GVPF~.... 48 (155)
-|+|+|++
T Consensus 15 pwkG~~~i.... 22 (22)
T 3ktp_B 15 PWKGLQNIxxxx 26 (26)
T ss_pred cccccccC....
Confidence 48888764
No 7
>4ag4_A Epithelial discoidin domain-containing receptor 1; immune system-transferase complex; HET: NAG; 2.80A {Homo sapiens}
Probab=22.26 E-value=1.9e+02 Score=23.93 Aligned_cols=66 Identities=9% Similarity=-0.009 Sum_probs=38.1
Q ss_pred ceEEEEEEeeCCCcCCCce------eeecccCCCCceE-EEeeccCccccccccCCCCCCCCcEEEEEeCCCCcEEEEEE
Q 037158 29 LYFDVVLHIDNASCDGVPF------LIKAGTGLIRHRY-VQFLHVLGNIYNERFGHNFDLATNELILRNVPDDAILVRVN 101 (155)
Q Consensus 29 Tfaa~~l~Idn~RW~GVPF------~lrtGK~L~~~~t-I~Fk~~~~~~f~~~~~~~~~~~~n~Lvi~iqP~~~i~l~~~ 101 (155)
-|-++++|.+|--=+||-+ +++.|..-.-... |.|...+... ...+..++|.|+..-+=.+++.
T Consensus 254 nFt~~~ih~~n~~~~~v~~f~~~~~~Fs~~~~~~~~~~p~~~~~~~d~~---------~~~ar~v~i~l~~r~~~~vk~~ 324 (351)
T 4ag4_A 254 AFQAMQVHCNNMHTLGARLPGGVECRFRRGPAMAWEGEPMRHNLGGNLG---------DPRARAVSVPLGGRVARFLQCR 324 (351)
T ss_dssp EEEEEEEEECCCGGGTBCCCSEEEEEEECSSSSSCSSSCEEEECSSCCS---------CCSCEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEEEecccccccceeeeEEEEEEECCCCccccCCceEeecCCCcC---------CCccceEEEeCCCcceeEEEEE
Confidence 4788899999977666554 4444432111111 5554332211 1134568899988877777777
Q ss_pred ee
Q 037158 102 NK 103 (155)
Q Consensus 102 ~k 103 (155)
.+
T Consensus 325 ~~ 326 (351)
T 4ag4_A 325 FL 326 (351)
T ss_dssp EE
T ss_pred EE
Confidence 66
No 8
>2rkz_M Fibronectin-binding protein; fibrronectin, 2F13F1, beta zipper, staphylococcus aureus, acute phase, alternative splicing, cell adhesion; 2.00A {Homo sapiens}
Probab=19.98 E-value=24 Score=18.50 Aligned_cols=9 Identities=33% Similarity=0.733 Sum_probs=6.7
Q ss_pred eeeeccCCC
Q 037158 6 AILGQYKAT 14 (155)
Q Consensus 6 ~v~GQY~~~ 14 (155)
++.|||++.
T Consensus 2 ~itGQYD~~ 10 (26)
T 2rkz_M 2 TLTGQYDKN 10 (26)
T ss_pred ccccccccc
Confidence 477999763
No 9
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=19.94 E-value=60 Score=27.24 Aligned_cols=27 Identities=15% Similarity=0.239 Sum_probs=21.4
Q ss_pred CCCCCcceEEE-----EEEeeCCCc-CCCceee
Q 037158 23 LNSLPPLYFDV-----VLHIDNASC-DGVPFLI 49 (155)
Q Consensus 23 ~~S~TeTfaa~-----~l~Idn~RW-~GVPF~l 49 (155)
|....||=+++ |++|--+|| .|||+-|
T Consensus 23 p~n~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL 55 (381)
T 3q6k_A 23 PDNMISTAFAYDAEGEKLFLAVPRKLPRVPYTL 55 (381)
T ss_dssp GGGCCCCEEEEETTTTEEEEECCTTSTTCSCSE
T ss_pred cCccceeeeeeecCCCcEEEEeCCCCCCCCcEE
Confidence 34456777888 999999999 6899955
No 10
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=17.57 E-value=42 Score=17.30 Aligned_cols=22 Identities=36% Similarity=0.708 Sum_probs=16.7
Q ss_pred HcCCCCCCCCHHHHH-Hhccccc
Q 037158 131 INGDNHLFMRSDELT-AAWNILN 152 (155)
Q Consensus 131 ~~Gd~t~F~~~deve-~sWri~d 152 (155)
|+|.++.|+++|-+. ..||-..
T Consensus 1 mngrpsvftsqdylsdhlwraln 23 (26)
T 2xl1_A 1 MNGRPSVFTSQDYLSDHLWRALN 23 (26)
T ss_pred CCCCCceeecHHHHHHHHHHHHh
Confidence 579999999999774 4677543
Done!