BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037159
(307 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M2Z5|FBL53_ARATH F-box/LRR-repeat protein At3g48880 OS=Arabidopsis thaliana
GN=At3g48880 PE=2 SV=1
Length = 309
Score = 204 bits (518), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 174/299 (58%), Gaps = 4/299 (1%)
Query: 9 RNWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDLNVLLCNAFDIL 68
R W+ + DILV+IF V +L ++ VC WRAA DP+LW+T+DL+ + ++F +
Sbjct: 11 RRWEELDTDILVRIFQKFSVFELTSGLAHVCRGWRAACCDPILWKTVDLSNMR-SSFIKI 69
Query: 69 PSNSNGLSDGHSSWLNAMHILNNASILSCKTVKRLIFNYSIYLKDEHLVYAATRFPMVKH 128
P + S IL + LS + + LIF+++++L D+ L Y A R P ++
Sbjct: 70 PLEPYVYVERRSD-EALTRILKLSMNLSGGSTRTLIFHFNLFLSDDQLTYTAERCPGLRR 128
Query: 129 LALPPCNEITVDGFRSAIQWWKGLESLTVPFISNASSIIQVIGANCKNFSMLKVMFSFDL 188
+ LP N I G AI+ WK LESLT+P I+N ++ I NCKNF LK+M F++
Sbjct: 129 VVLPAWNRIKKTGICKAIRIWKDLESLTMPSIANPPYLLTEIAKNCKNFKELKIMGPFEV 188
Query: 189 DFAMSLFMSIPELKVLSLRSSIVDKNALNLILTLMGSLEALNISHCLLGQIPQF-PGPLL 247
FA +L +P +K LS+R S + + AL IL + SLE LNISH L + + P +
Sbjct: 189 FFANTLITCLPNIKTLSIRCSAIKREALMKILDGLPSLEVLNISHSHLVEYSGWQPQQKV 248
Query: 248 AIEQLDNFILGKASRLREFFTC-QVQSCSICQFEYDDDNIFGWYEYDKGLWRDDEIRSL 305
+ +LD I+ K +RL++F TC ++C +CQ +D+ I WY+Y++G W+ DE+ SL
Sbjct: 249 IVRELDKTIMEKTARLKKFLTCMDHKTCVMCQRTENDEGIVRWYKYEEGDWKVDEVSSL 307
>sp|Q9T0C6|FB230_ARATH Putative F-box protein At4g11580 OS=Arabidopsis thaliana
GN=At4g11580 PE=4 SV=1
Length = 333
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 153/340 (45%), Gaps = 43/340 (12%)
Query: 1 MTSQGSNSRNWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDLNVL 60
+ S W +++ DIL IF L V D+ S+VC SW AS + LW T+DL L
Sbjct: 4 VESTSGEVSEWADLNKDILELIFNKLDVMDITMGASRVCISWFLASHNKTLWNTVDLTNL 63
Query: 61 ----LCNAFDILPS------------NSNGLSDGHSSWLNA--------------MHILN 90
+ F+ + +GL++ + ++ M++L
Sbjct: 64 QELDVSRIFNFKDKERPIFFYKHPVDHKHGLTNLLTKIISRFFLDFFEVEGSISLMNLLV 123
Query: 91 NASILSCKTVKRLIFNYSIYLKDEHLVYAATRFPMVKHLALPPCNEITVDGFRSAIQWWK 150
S LS K L FN++ Y+++ L +AA + P ++ LALP R A WK
Sbjct: 124 EISKLSRMAPKNLFFNFNSYIQENGLKFAAEKMPNIEKLALPIWCYQNEKSLRFAFSQWK 183
Query: 151 GLESLTVPFISNASSI--IQVIGANCKNFSMLKVMFSFDLDFAMSLFMSIPELKVLSLRS 208
L++L + + S + +G +C N + LK + + + + + LK LSLR
Sbjct: 184 NLKTLIIAHEHSFSGRFDFKAVGESCSNLTNLKYLGRLEEYTSREIVSYLHSLKRLSLRC 243
Query: 209 SIVDKNALNLILTLMGSLEALNISHCLLGQIPQFPGPLLAIEQLDNFILGKAS-RLREFF 267
+V A+ +T + +L LN+SHC + P + L + +DN+++ A+ +L +F
Sbjct: 244 FLVSSIAVYRFITGLPNLTILNVSHC---KNP-YDYFLPIAKSIDNYVITAATQKLEKFI 299
Query: 268 TCQVQSCSICQFEYDDDNIFGWYEYDKGLWRDDEIRSLAF 307
TC C IC+ D Y +WR+DEI+ L F
Sbjct: 300 TCP-HDCMICK-----DRCRYSLSYLAEVWRNDEIKELEF 333
>sp|Q9S9V9|FBL23_ARATH Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana
GN=FBL23 PE=4 SV=1
Length = 449
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 95/239 (39%), Gaps = 33/239 (13%)
Query: 9 RNWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDL---NVLLCNAF 65
RNW + + I + L +++ KVC W +DP +W +D+ N +
Sbjct: 179 RNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAAFKY 238
Query: 66 DILPSNSNGLSDGHSSWLNAMHILNNASILSCKTVKRLIFNYSIYLKDEHLVYAATRFPM 125
D+ + + H + Y ++ ++Y A R
Sbjct: 239 DLESMCRHAVDRSHGGLIE--------------------IEIWYYGTNDLIMYIADRSSN 278
Query: 126 VKHLALPPCNEITVDGFRSAIQWWKGLESLTVPFISNASSIIQVIGANCKNFSMLK---- 181
+K L L C IT +G A+ LE L V + + ++ IG +C N LK
Sbjct: 279 LKSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLNRA 338
Query: 182 --VMFS---FDLDFAMSLFMSIPELKVLSLRSSIVDKNALNLILTLMGSLEALNISHCL 235
+MFS FD D A ++ S+PEL+ L L + + LN IL LE L++ C
Sbjct: 339 PEIMFSNSGFD-DNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCF 396
>sp|Q9S9V8|FBL9_ARATH Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana GN=FBL9
PE=4 SV=1
Length = 246
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 29/237 (12%)
Query: 9 RNWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDLNVLLCNAFDIL 68
RNW + ++ I + L +++ +VC SWR +DP +W +D+ +
Sbjct: 19 RNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRI--------- 69
Query: 69 PSNSNGLSDGHSSWLNAMHILNNASILSCKTVK-----RLIFNYSIYLKDEHLVYAATRF 123
+ +N++ + L C+ V L N + L Y A R
Sbjct: 70 ----------KENLVNSVELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRS 119
Query: 124 PMVKHLALPPCNEITVDGFRSAIQWWKGLESLTVPFISN-ASSIIQVIGANCKNFSMLKV 182
++ L + C + G A LE L + + S+ ++V+G +C N LK+
Sbjct: 120 SNLRRLGVVDCAPVLSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKL 179
Query: 183 MFSFDL----DFAMSLFMSIPELKVLSLRSSIVDKNALNLILTLMGSLEALNISHCL 235
+ D+ A+++ ++P L+ L L + + + LN IL L+ L + CL
Sbjct: 180 NCTGDVKCCDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCL 236
>sp|Q9M0U9|SKI19_ARATH F-box protein SKIP19 OS=Arabidopsis thaliana GN=SKIP19 PE=1 SV=1
Length = 302
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 45/243 (18%)
Query: 8 SRNWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDLNVL------- 60
S NW + ++ I L +++ KVC SWR +DP +W +D++ L
Sbjct: 16 STNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMD 75
Query: 61 -----LCNAFDILPSNSNGLSDGHSSWLNAMHILNNASILSCKTVKRLIFNYSIYLKDEH 115
+C + + GL D + + +LN
Sbjct: 76 YNLEIMCRH--AVDRSQGGLVDIGIWYFGTVDLLN------------------------- 108
Query: 116 LVYAATRFPMVKHLALPPCNEITVDGFRSAIQWWKGLESLTVPFISNASSIIQVIGANCK 175
Y A R ++ L L C++IT DGF A+ LE L + + S + ++V+G C
Sbjct: 109 --YIAHRSSNLRSLRLIRCSQITDDGFVEAVVKLP-LEELELSYCSFSVESLRVVGQCCL 165
Query: 176 NFSMLKVMF---SFDLDFAMSLFMSIPELKVLSLRSSIVDKNALNLILTLMGSLEALNIS 232
N LK+ + D A+++ ++P+L+ L L + + LN IL +LE L++
Sbjct: 166 NMKTLKLNKHPQKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLR 225
Query: 233 HCL 235
C
Sbjct: 226 RCF 228
>sp|Q9M0U7|FB221_ARATH Putative F-box protein At4g05475 OS=Arabidopsis thaliana
GN=At4g05475 PE=4 SV=2
Length = 309
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 39/243 (16%)
Query: 10 NWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDLNVLLCNAFDILP 69
NW ++ ++ I + L VTD++ K+C +WR +DP +W ++L L FD
Sbjct: 39 NWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKINLRDCLMYEFDF-- 96
Query: 70 SNSNGLSDGHSSWLNAMHILNNASILSCKTVKRLIFNYSIYLKDEHLVYAATRFPMVKHL 129
S + L+ +L N ++ D L Y R +K L
Sbjct: 97 ----------ESMCRHIVDLSQGGLLE--------INIEHFVSDSLLSYIVDRSCNLKSL 138
Query: 130 ALPPCNEITVDGFRSAIQWWKGLESLTVPFISNASSIIQVIGANCKNFSMLKV-----MF 184
+ +T G + I+ LE+L + F S+ ++ IG C LK+
Sbjct: 139 GISIYEPMTNKGVMNGIEKLPLLETLVI-FHSSIKLDLKAIGHACPQLKTLKLNSLGSEL 197
Query: 185 SFDL------------DFAMSLFMSIPELKVLSLRSSIVDKNALNLILTLMGSLEA-LNI 231
+ D+ D A+++ S+P+L+ L L + + LN IL LE L++
Sbjct: 198 AHDISQVGYIPLLECDDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDV 257
Query: 232 SHC 234
C
Sbjct: 258 RKC 260
>sp|Q9M0U8|FBL21_ARATH Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana
GN=FBL21 PE=4 SV=1
Length = 304
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 96/248 (38%), Gaps = 44/248 (17%)
Query: 9 RNWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDLNVLLCNAFDIL 68
RNW ++ ++ I + L +TD++ KVC WR +DP +W ++ L FD +
Sbjct: 44 RNWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKINTRDCLMYNFDFV 103
Query: 69 PSNSNGLSDGHSSWLNAMHILNNASILSCKTVKRLIFNYSIYLKDEHLVYAATRFPMVKH 128
S + L+ +L + +L D L Y R ++
Sbjct: 104 ------------SMCRHIVDLSQGGLLEINVDEH-------FLSDSLLSYITDRN--LRS 142
Query: 129 LALPPC-NEITVDGFRSAIQWWKGLESLTVPFISNASSIIQVIGANCKNFSMLKV----- 182
L L C +T G +AI LE+L V S ++ IG C LK+
Sbjct: 143 LGLGMCFPRVTKLGVVNAIAKIPLLETLEVTH-SCIKLDLKAIGHACPQLKTLKLNSLGR 201
Query: 183 ---------------MFSFDL-DFAMSLFMSIPELKVLSLRSSIVDKNALNLILTLMGSL 226
M + D A+++ S+P+L L L ++ + LN IL L
Sbjct: 202 LWPASDKYDSNVLDDMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHL 261
Query: 227 EALNISHC 234
E L++ C
Sbjct: 262 EHLDVRKC 269
>sp|Q96IG2|FXL20_HUMAN F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBXL20 PE=1 SV=2
Length = 436
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 6/151 (3%)
Query: 91 NASILSCKTVKRLIFNYSIYLKDEHLVYAATRFPMVKHLALPPCNEITVDGFRSAIQWWK 150
A + C +K L L+DE L Y P + L L C +IT +G + +
Sbjct: 188 QALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCH 247
Query: 151 GLESLTVPFISNAS-SIIQVIGANCKNFSMLKVMFS---FDLDFAMSLFMSIPELKVLSL 206
L+SL SN + +I+ +G NC +L+V D+ F +L + EL+ + L
Sbjct: 248 KLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFT-TLARNCHELEKMDL 306
Query: 207 RSSIVDKNALNLILTL-MGSLEALNISHCLL 236
+ ++ + L++ L+ L++SHC L
Sbjct: 307 EECVQITDSTLIQLSIHCPRLQVLSLSHCEL 337
>sp|Q58DG6|FXL20_BOVIN F-box/LRR-repeat protein 20 OS=Bos taurus GN=FBXL20 PE=2 SV=2
Length = 436
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 6/151 (3%)
Query: 91 NASILSCKTVKRLIFNYSIYLKDEHLVYAATRFPMVKHLALPPCNEITVDGFRSAIQWWK 150
A + C +K L L+DE L Y P + L L C +IT +G + +
Sbjct: 188 QALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCH 247
Query: 151 GLESLTVPFISNAS-SIIQVIGANCKNFSMLKVMFS---FDLDFAMSLFMSIPELKVLSL 206
L+SL SN + +I+ +G NC +L+V D+ F +L + EL+ + L
Sbjct: 248 KLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFT-TLARNCHELEKMDL 306
Query: 207 RSSIVDKNALNLILTL-MGSLEALNISHCLL 236
+ ++ + L++ L+ L++SHC L
Sbjct: 307 EECVQITDSTLIQLSIHCPRLQVLSLSHCEL 337
>sp|Q9CZV8|FXL20_MOUSE F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3
Length = 436
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 6/151 (3%)
Query: 91 NASILSCKTVKRLIFNYSIYLKDEHLVYAATRFPMVKHLALPPCNEITVDGFRSAIQWWK 150
A + C +K L L+DE L Y P + L L C +IT +G + +
Sbjct: 188 QALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCH 247
Query: 151 GLESLTVPFISNAS-SIIQVIGANCKNFSMLKVMFS---FDLDFAMSLFMSIPELKVLSL 206
L+SL SN + +I+ +G NC +L+V D+ F +L + EL+ + L
Sbjct: 248 KLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFT-TLARNCHELEKMDL 306
Query: 207 RSSIVDKNALNLILTL-MGSLEALNISHCLL 236
+ ++ + L++ L+ L++SHC L
Sbjct: 307 EECVQITDSTLIQLSIHCPRLQVLSLSHCEL 337
>sp|Q9FDX1|SKIP1_ARATH F-box protein SKIP1 OS=Arabidopsis thaliana GN=SKIP1 PE=1 SV=1
Length = 300
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 16/200 (8%)
Query: 1 MTSQGSNSRNWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDLNVL 60
M GS+ W + +IL+ I L + +L V SW RDP LW DL
Sbjct: 1 MEEDGSD---WGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPW 57
Query: 61 LCNAFDILPSNSNGLSDGHSSWLNAMHILNNASILSCKTVKRLIFNYSIYLKDEHLVYAA 120
FD P +++ S ++ M L + S + ++ + D L YAA
Sbjct: 58 ----FDSYPESTHLWSPEFEQKVDLM--LRSVVDWSEGGLTKIRVR---HCSDHALSYAA 108
Query: 121 TRFPMVKHLALPPCNEITVDGFRSAIQWWKGLESLTVPFISNAS-SIIQVIGANCKNFSM 179
R P ++ LA+ +T + L+ L + + S + +IG NC N +
Sbjct: 109 DRCPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRI 168
Query: 180 LKVMFSFDLDFAMSLFMSIP 199
LK +D++ S+P
Sbjct: 169 LKRNL---MDWSSRHIGSVP 185
>sp|Q9ZPE4|FBW2_ARATH F-box protein FBW2 OS=Arabidopsis thaliana GN=FBW2 PE=1 SV=1
Length = 317
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 27/235 (11%)
Query: 9 RNWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDLNVLLCNAFDIL 68
R+W + D L IF L + +++ V +VC +W A P W+ +D+ L
Sbjct: 8 RHWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIE---------L 58
Query: 69 PSNSNGLSDGHSSWLNAMHILNNASILSCKTVKRLIFNYSIYLKDEHLVYAATRFPMVKH 128
SN SD H + M I +A L +V L N SI+ + A +K
Sbjct: 59 WSNRFHQSD-HLDRMLEMLIPRSAGSLRKLSVTGLR-NDSIF------SFIAQHAGSLKT 110
Query: 129 LALPPCNEITVDGFRSAIQWWKGLESLTVPFISN-ASSIIQVIGANCKNF-SMLKVMFSF 186
L +P +T G + + L L + + IQ IG +CK+ + M
Sbjct: 111 LKVPRSG-LTNSGVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPL 169
Query: 187 DL-------DFAMSLFMSIPELKVLSLRSSIVDKNALNLILTLMGSLEALNISHC 234
D+ D A ++ ++P+LK L + V + IL+ LE L + C
Sbjct: 170 DVASVVSHDDEAYAIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGC 224
>sp|Q8BH16|FBXL2_MOUSE F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl2 PE=1 SV=1
Length = 423
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 31/244 (12%)
Query: 5 GSNSRNWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDLNVLLCNA 64
N RN ++++ + KI +++S+ CS + LDL +
Sbjct: 100 AQNCRNIEHLNLNGCTKI-----TDSTCYSLSRFCSKLKH----------LDLT----SC 140
Query: 65 FDILPSNSNGLSDG-------HSSWLNAMHILN-NASILSCKTVKRLIFNYSIYLKDEHL 116
+ S+ G+S+G + SW + + A + C+ +K L+ L+DE L
Sbjct: 141 VSVTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEAL 200
Query: 117 VYAATRFPMVKHLALPPCNEITVDGFRSAIQWWKGLESLTVPFISN-ASSIIQVIGANCK 175
+ + L L C+ IT DG + L++L + SN + + +G NC
Sbjct: 201 KHIQNHCHELVSLNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCP 260
Query: 176 NFSMLKVMFSFDL-DFAMSLFM-SIPELKVLSLRSSIVDKNALNLILTL-MGSLEALNIS 232
+L+ L D +L + EL+ + L ++ ++ + L++ L+AL++S
Sbjct: 261 RLQVLEAARCSHLTDAGFTLLARNCHELEKMDLEECVLITDSTLVQLSIHCPKLQALSLS 320
Query: 233 HCLL 236
HC L
Sbjct: 321 HCEL 324
>sp|Q9M224|ADLO2_ARATH Protein ARABIDILLO 2 OS=Arabidopsis thaliana GN=At3g60350 PE=2 SV=1
Length = 928
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 18/204 (8%)
Query: 10 NWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDLNVLLCNAFDI-- 67
NW ++ YD + +F L D +++ C +WR+ LW +LDL + FD+
Sbjct: 39 NWTSLPYDTVFHLFTRLNYRDRA-SLASTCRTWRSLGASSFLWSSLDLRA---HKFDLSM 94
Query: 68 LPSNSNGLSDGHSSWLNAMHILNNASILSCKTVKRLIFNYSIYLKDEHLVYAATRFPMVK 127
S + D + + L +++ + +Y + D L A R ++
Sbjct: 95 AASLATRCVDLQKIRFRGVDSADAIIHLKARSLLEISGDYCRKITDATLSMIAARHEALE 154
Query: 128 HLALPP--CNEITVDGFRSAIQWWKGLESLTVPFISNASS-IIQVIGANCKNFSMLKVMF 184
L L P C IT D R L+ L V + + SS I+ + +C S
Sbjct: 155 SLQLGPDFCERITSDAIRVIAFCCPKLKKLRVSGMRDVSSEAIESLAKHCPQLS------ 208
Query: 185 SFDLDFAMSLFMSIPEL-KVLSLR 207
DL F L ++ L KV+SLR
Sbjct: 209 --DLGFLDCLNINEEALGKVVSLR 230
>sp|Q5R3Z8|FBXL2_PONAB F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL2 PE=2 SV=1
Length = 423
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 103/244 (42%), Gaps = 31/244 (12%)
Query: 5 GSNSRNWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDLNVLLCNA 64
N RN ++++ + KI +++S+ CS + LDL +
Sbjct: 100 AQNCRNIEHLNLNGCTKI-----TDSTCYSLSRFCSKLKH----------LDLT----SC 140
Query: 65 FDILPSNSNGLSDG-------HSSWLNAMHILN-NASILSCKTVKRLIFNYSIYLKDEHL 116
I S+ G+S+G + SW + + A + C+ +K L+ L+DE L
Sbjct: 141 VSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEAL 200
Query: 117 VYAATRFPMVKHLALPPCNEITVDGFRSAIQWWKGLESLTVPFISN-ASSIIQVIGANCK 175
+ + L L C+ IT +G + L++L + SN + + +G NC
Sbjct: 201 KHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCP 260
Query: 176 NFSMLKVMFSFDL-DFAMSLFM-SIPELKVLSLRSSIVDKNALNLILTL-MGSLEALNIS 232
+L+ L D +L + EL+ + L I+ ++ + L++ L+AL++S
Sbjct: 261 RLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLS 320
Query: 233 HCLL 236
HC L
Sbjct: 321 HCEL 324
>sp|Q9UKC9|FBXL2_HUMAN F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL2 PE=1 SV=3
Length = 423
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 103/244 (42%), Gaps = 31/244 (12%)
Query: 5 GSNSRNWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDLNVLLCNA 64
N RN ++++ + KI +++S+ CS + LDL +
Sbjct: 100 AQNCRNIEHLNLNGCTKI-----TDSTCYSLSRFCSKLKH----------LDLT----SC 140
Query: 65 FDILPSNSNGLSDG-------HSSWLNAMHILN-NASILSCKTVKRLIFNYSIYLKDEHL 116
I S+ G+S+G + SW + + A + C+ +K L+ L+DE L
Sbjct: 141 VSITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEAL 200
Query: 117 VYAATRFPMVKHLALPPCNEITVDGFRSAIQWWKGLESLTVPFISN-ASSIIQVIGANCK 175
+ + L L C+ IT +G + L++L + SN + + +G NC
Sbjct: 201 KHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCP 260
Query: 176 NFSMLKVMFSFDL-DFAMSLFM-SIPELKVLSLRSSIVDKNALNLILTL-MGSLEALNIS 232
+L+ L D +L + EL+ + L I+ ++ + L++ L+AL++S
Sbjct: 261 RLQILEAARCSHLTDAGFTLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLS 320
Query: 233 HCLL 236
HC L
Sbjct: 321 HCEL 324
>sp|Q9M0U6|FBL22_ARATH Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana
GN=FBL22 PE=4 SV=1
Length = 307
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 22/231 (9%)
Query: 10 NWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDLNVLLCNAFDILP 69
NW + D+L I + L +++ KVC SWR S+DP++W +D+
Sbjct: 26 NWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMR----------- 74
Query: 70 SNSNGLSDGHSSWLNAMHILNNASILSCKTVKRLIFNYSIYLKDEHLVYAATRFPMVKHL 129
N L ++ H+++ LS + + + L Y A R ++ L
Sbjct: 75 -NLRRLYCIYAMEACCRHVVD----LSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRL 129
Query: 130 ALPPCNEITVDGFRSAIQWWKGLESLTVPFISNASSIIQVIGANCKNFSMLKVM-----F 184
+ +IT G AI LE L + + S + IG C N LK++
Sbjct: 130 RVKG-GQITSVGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKLVGFWSHL 188
Query: 185 SFDLDFAMSLFMSIPELKVLSLRSSIVDKNALNLILTLMGSLEALNISHCL 235
+ + A+++ ++P L L L S+ + LN IL LE L++ C
Sbjct: 189 NESDNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCF 239
>sp|Q9QZH7|FXL20_RAT F-box/LRR-repeat protein 20 OS=Rattus norvegicus GN=Fbxl20 PE=1
SV=1
Length = 276
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 92 ASILSCKTVKRLIFNYSIYLKDEHLVYAATRFPMVKHLALPPCNEITVDGFRSAIQWWKG 151
A + C +K L L+DE L Y P + L L C +IT +G + +
Sbjct: 189 ALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITICRGCHK 248
Query: 152 LESLTVPFISNAS-SIIQVIGANC 174
L+SL SN + +I+ +G NC
Sbjct: 249 LQSLCASGCSNITDAILNALGQNC 272
>sp|A6H779|FBXL2_BOVIN F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1
Length = 423
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 37/245 (15%)
Query: 7 NSRNWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDLNVLLCNAFD 66
N RN ++++ + KI +++S+ CS + LDL +
Sbjct: 102 NCRNIEHLNLNGCTKI-----TDSTCYSLSRFCSKLKH----------LDLT----SCVS 142
Query: 67 ILPSNSNGLSDG--HSSWLN---AMHILNN---ASILSCKTVKRLIFNYSIYLKDEHLVY 118
I S+ G+S+G H +LN I + A + C+ ++ L+ L+DE L +
Sbjct: 143 ITNSSLKGISEGCRHLEYLNLSWCDQITKDGVEALVRGCRGLRALLLRGCTQLEDEALKH 202
Query: 119 AATRFPMVKHLALPPCNEITVDGFRSAIQWWKGLESLTVPFISNASSI----IQVIGANC 174
+ L L C+ +T DG +Q +G L +S S+ + + NC
Sbjct: 203 IQNYCHELVSLNLQSCSRVTDDGV---VQLCRGCPRLQALCLSGCGSLTDASLTALALNC 259
Query: 175 KNFSMLKVMFSFDL-DFAMSLFM-SIPELKVLSLRSSI-VDKNALNLILTLMGSLEALNI 231
+L+ L D +L + +L+ + L I + L + L+AL++
Sbjct: 260 PRLQILEAARCSHLTDAGFTLLARNCHDLEKMDLEECILITDRTLTQLSIHCPKLQALSL 319
Query: 232 SHCLL 236
SHC L
Sbjct: 320 SHCEL 324
>sp|O22161|ADLO1_ARATH Protein ARABIDILLO 1 OS=Arabidopsis thaliana GN=FBX5 PE=1 SV=1
Length = 930
Score = 38.1 bits (87), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 10/200 (5%)
Query: 10 NWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDLNVLLCNAFD--I 67
+W ++ YD ++++F L D +++ C +WR LW +LDL + FD +
Sbjct: 46 DWISLPYDTVLQLFTCLNYRDRA-SLASTCKTWRCLGASSCLWTSLDLRP---HKFDASM 101
Query: 68 LPSNSNGLSDGHSSWLNAMHILNNASILSCKTVKRLIFNYSIYLKDEHLVYAATRFPMVK 127
S ++ + H + ++ L + + + +Y + D L R ++
Sbjct: 102 AASLASRCVNLHYLRFRGVESADSLIHLKARNLIEVSGDYCKKITDATLSMIVARHEALE 161
Query: 128 HLALPP--CNEITVDGFRSAIQWWKGLESLTVPFISNASS-IIQVIGANCKNFSMLKVMF 184
L L P C IT D ++ L+ L + I + +S I+ + +C + L +
Sbjct: 162 SLQLGPDFCERITSDAIKAVAFCCPKLKKLRLSGIRDVTSEAIEALAKHCPQLNDLGFLD 221
Query: 185 SFDLD-FAMSLFMSIPELKV 203
++D A+ +S+ L V
Sbjct: 222 CLNIDEEALGKVVSVRYLSV 241
>sp|P34284|YKK7_CAEEL Uncharacterized F-box/LRR-repeat protein C02F5.7 OS=Caenorhabditis
elegans GN=C02F5.7 PE=4 SV=3
Length = 466
Score = 38.1 bits (87), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 31/225 (13%)
Query: 17 DILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDLNVLLCNAFDILPSNSNGLS 76
++L+K+F L L + ++VC SW + D W+ +DL D+ + L+
Sbjct: 63 EVLLKVFSFLDTKALCRS-AQVCRSWSILALDGSNWQRVDLFTF---QRDVKTAVVENLA 118
Query: 77 DGHSSWLNAMHILNNASILSCKTVKRLIFNYSIYLKDEHLVYAATRFPMVKHLALPPCNE 136
+L + S+ C+ V D L +R P ++HL+L C
Sbjct: 119 RRCGGFLKEL------SLKGCENV-----------HDSALRTFTSRCPNLEHLSLYRCKR 161
Query: 137 ITVDGFRSAIQWWKGLESLTVPFISNASSI----IQVIGANCKNFSMLKVMFSFDL-DFA 191
+T + ++ L L + N SSI ++ IG C N S L + + + D
Sbjct: 162 VTDASCENLGRYCHKLNYLN---LENCSSITDRAMKYIGDGCPNLSYLNISWCDAIQDRG 218
Query: 192 MSLFMS-IPELKVLSLRS-SIVDKNALNLILTLMGSLEALNISHC 234
+ + +S L L LR + +N + MG+++ LN+ C
Sbjct: 219 VQIILSNCKSLDTLILRGCEGLTENVFGSVEAHMGAIKKLNLLQC 263
>sp|Q8WV35|LRC29_HUMAN Leucine-rich repeat-containing protein 29 OS=Homo sapiens GN=LRRC29
PE=2 SV=1
Length = 223
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 97 CKTVKRLIFNYSIYLKDEHLVYAATRFPMVKHLALPPCNEI---TVDGFRSAIQWWKGLE 153
C +++ L ++ L D+ AA+ +P ++HL L C+++ T+D A + + L+
Sbjct: 125 CPSLEHLALSHCSRLSDKGWAQAASSWPRLQHLNLSSCSQLIEQTLDAIGQACRQLRVLD 184
Query: 154 SLTVPFISNASSIIQVIGANCKNFSMLKVMFSFDLDFAMSL 194
T P I+ A+ ++ A S ++ F D ++L
Sbjct: 185 VATCPGINMAA--VRRFQAQLPQVSCVQSRFVGGADLTLTL 223
>sp|Q13309|SKP2_HUMAN S-phase kinase-associated protein 2 OS=Homo sapiens GN=SKP2 PE=1
SV=2
Length = 424
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 10 NWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDL 57
+W ++ ++L+ IF L + +L+ VS VC W + D LW+TLDL
Sbjct: 96 SWDSLPDELLLGIFSCLCLPELL-KVSGVCKRWYRLASDESLWQTLDL 142
>sp|Q9Z0Z3|SKP2_MOUSE S-phase kinase-associated protein 2 OS=Mus musculus GN=Skp2 PE=1
SV=1
Length = 424
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 10 NWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDL 57
+W ++ ++L+ IF L + +L+ VS VC W S D LW++LDL
Sbjct: 96 SWDSLPDELLLGIFSCLCLPELL-RVSGVCKRWYRLSLDESLWQSLDL 142
>sp|Q8BMT4|LRC33_MOUSE Leucine-rich repeat-containing protein 33 OS=Mus musculus GN=Lrrc33
PE=2 SV=2
Length = 693
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 199 PELKVLSLRSSIVDKNALNLILTLMGSLEALNISHCLLGQIPQFPGPLLAIEQLD---NF 255
P L+VLSLR + A + + G+L AL++S L P+F G LA+ LD N
Sbjct: 511 PTLQVLSLRDVGLGSGAAEMDFSAFGNLRALDLSGNSLTSFPKFKGS-LALRTLDLRRNS 569
Query: 256 ILGKASR-LREFFTCQVQSCSICQFEYDDDNIFGW 289
+ R + E +Q+ + Q YD + GW
Sbjct: 570 LTALPQRVVSEQPLRGLQTIYLSQNPYDCCGVEGW 604
>sp|Q9UKT7|FBXL3_HUMAN F-box/LRR-repeat protein 3 OS=Homo sapiens GN=FBXL3 PE=1 SV=1
Length = 428
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 2 TSQGSNSRNWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDLNV 59
T++ S + +W N+ DI++++F L + D A S+VC +W P LW + +
Sbjct: 27 TNEHSQTCDWGNLLQDIILQVFKYLPLLDRAHA-SQVCRNWNQVFHMPDLWRCFEFEL 83
>sp|Q8N531|FBXL6_HUMAN F-box/LRR-repeat protein 6 OS=Homo sapiens GN=FBXL6 PE=2 SV=1
Length = 539
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 4 QGSNSRNWQNMHYDILVKIFMALRVTD----LIFAVSKVCSSWRAASRDPVLWETLDLN 58
+G ++ + +ILV+IF L D + ++VC W+ A+ P LW T+ L+
Sbjct: 105 EGPDAGWGDRIPLEILVQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALWHTVTLS 163
>sp|Q9FE83|SKIP2_ARATH F-box protein SKIP2 OS=Arabidopsis thaliana GN=SKIP2 PE=1 SV=1
Length = 527
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 4/132 (3%)
Query: 108 SIYLKDEHLVYAATRFPMVKHLALPPCNEITVDGFRSAIQWWKGLESLTVPFISNASSII 167
S+ L DE L + R + + L C EIT G + K L+ L+V + + +
Sbjct: 117 SVSLSDEALAMISVRCLNLTRVKLRGCREITDLGMEDFAKNCKNLKKLSVGSCNFGAKGV 176
Query: 168 QVIGANCKNFSMLKVMFSFDLDFAMSLFMSIPELKVLSLRS----SIVDKNALNLILTLM 223
+ +CK L V + A L + SLRS +V+ +L
Sbjct: 177 NAMLEHCKLLEELSVKRLRGIHEAAELIHLPDDASSSSLRSICLKELVNGQVFEPLLATT 236
Query: 224 GSLEALNISHCL 235
+L+ L I CL
Sbjct: 237 RTLKTLKIIRCL 248
>sp|Q8C4V4|FBXL3_MOUSE F-box/LRR-repeat protein 3 OS=Mus musculus GN=Fbxl3 PE=1 SV=1
Length = 428
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 2 TSQGSNSRNWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETLDLNV 59
T + S +W N+ DI++ +F L + D A S+VC +W P LW + +
Sbjct: 27 TQERSQPCDWGNLLQDIVLHVFKYLPLLDRAHA-SQVCRNWNQVFHMPDLWRCFEFEL 83
>sp|O80603|FB1_ARATH F-box protein At1g10110 OS=Arabidopsis thaliana GN=At1g10110 PE=2
SV=1
Length = 399
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 1 MTSQGSNSRNWQNMHYDILVKIFMALRVTDLIFAVSK-VCSSWRAASR 47
M + + NW + DIL +F L TD FA +K VCSSW AS+
Sbjct: 1 MATDDDGTPNWSELVTDILSLVFKHLSFTD--FARAKTVCSSWYFASK 46
>sp|Q9QXW2|FBXW5_MOUSE F-box/WD repeat-containing protein 5 OS=Mus musculus GN=Fbxw5
PE=1 SV=1
Length = 573
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 18 ILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWE 53
++ +IF++L D + A VC W+A SRD LW+
Sbjct: 13 LVYQIFLSLGPAD-VLAAGLVCRQWQAVSRDEFLWK 47
>sp|Q86YC3|LRC33_HUMAN Leucine-rich repeat-containing protein 33 OS=Homo sapiens GN=LRRC33
PE=2 SV=1
Length = 692
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 199 PELKVLSLRSSIVDKNALNLILTLMGSLEALNISHCLLGQIPQFPGPLLAIEQLD---NF 255
P L+VLSLR+ + + + L + G+L L++S L P+F G LA+E LD N
Sbjct: 511 PMLQVLSLRNMGLHSSFMALDFSGFGNLRDLDLSGNCLTTFPRFGGS-LALETLDLRRNS 569
Query: 256 ILGKASR-LREFFTCQVQSCSICQFEYDDDNIFGWYEYDKG 295
+ + + E + +++ + Q YD + GW G
Sbjct: 570 LTALPQKAVSEQLSRGLRTIYLSQNPYDCCGVDGWGALQHG 610
>sp|Q9SMY8|FBL15_ARATH F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana GN=FBL15 PE=1
SV=2
Length = 990
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 83 LNAMHILNNASILSCKTVKRLIFNYSIYLKDEHLVYAATRFPMVKHLALPPCNEITVDGF 142
L +L+ ASI+ C + L ++ L+D+ L P+++ L L C I DG
Sbjct: 670 LKGCGVLSEASIM-CPLLTSLDASFCSQLRDDCLSATTASCPLIESLVLMSCPSIGSDGL 728
Query: 143 RSAIQWWKGLESLTV-----PFISNASSIIQVIGANCKNFSMLKVM-FSFDLDFAMSLFM 196
S GL +LTV F+ N ++ + +C +LK+ + D ++
Sbjct: 729 SS----LNGLPNLTVLDLSYTFLMN----LEPVFKSCIQLKVLKLQACKYLTDSSLEPLY 780
Query: 197 ---SIPELKVLSLRSSIVDKNALNLILTLMGSLEALNISHCL 235
++P L+ L L + + A++ +L L L+++ C+
Sbjct: 781 KEGALPALEELDLSYGTLCQTAIDDLLACCTHLTHLSLNGCV 822
>sp|Q4KLI9|FBXW5_RAT F-box/WD repeat-containing protein 5 OS=Rattus norvegicus
GN=Fbxw5 PE=2 SV=1
Length = 569
Score = 31.6 bits (70), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 18 ILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWE 53
++ +IF++L D + A VC W+A SRD LW
Sbjct: 13 LVYQIFLSLGPAD-VLAAGLVCRQWQAVSRDEFLWR 47
>sp|Q9LUB6|SNE_ARATH F-box protein SNE OS=Arabidopsis thaliana GN=SNE PE=1 SV=1
Length = 157
Score = 31.6 bits (70), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 13 NMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWETL 55
N H+D+LV+I L + L A VC W A +R+ +WE L
Sbjct: 29 NDHHDVLVEILRRLDGSSLCSAAC-VCRLWSAVARNDSIWEEL 70
>sp|P17778|YOPM_YERPE Outer membrane protein YopM OS=Yersinia pestis GN=yopM PE=1 SV=2
Length = 409
Score = 31.6 bits (70), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 193 SLFMSIPELKVLSLRSSI-VDKNALNLILTLMGSLEALNISHCLLGQIPQFPGPLLAIEQ 251
++ +PEL+ L ++I D N L + L SLEALN+ L +P+ P L ++
Sbjct: 225 NILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDV 284
Query: 252 LDNFILG 258
+N G
Sbjct: 285 SENIFSG 291
>sp|Q9ZW88|FBL34_ARATH F-box/LRR-repeat protein At1g67190 OS=Arabidopsis thaliana
GN=At1g67190 PE=2 SV=1
Length = 419
Score = 31.2 bits (69), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 33/226 (14%)
Query: 30 DLIFAVSKVCSSWRAASRDPVLWETLDLNV--------LLCNAFDILPSNSNGLSDGHSS 81
D++ A S C WR A R + +TL N L N +IL + + + G
Sbjct: 21 DVVIA-SATCRKWREACRKHL--QTLSFNSADWPFYRDLTTNRLEILITQTIFQTMG--- 74
Query: 82 WLNAMHIL-NNASILSCKTVKRLIFNYSIYLKD--EHLVYAATRFPMVKHLALPPCNEI- 137
L + I+ ++A+ S TV + +Y +D L Y P V L + ++
Sbjct: 75 -LQGLSIMMDDANKFSAATV----IAWLMYTRDTLRRLSYNVRTTPNVNILEICGRQKLE 129
Query: 138 -------TVDGFRSAIQWWKGLESLTVPFISNASSIIQVIGANCKNFSMLKVMFSFDLDF 190
++ G + Q + L+SL++ ++S ++ + ++ + C L+++ L+
Sbjct: 130 ALVLAHNSITGVEPSFQRFPCLKSLSLSYVSISALDLNLLLSACPMIESLELV---SLEI 186
Query: 191 AMSLFMSIPELKVLSLRSSIVDKNALNLILTLMGSLEALNISHCLL 236
AMS EL +L+S D +L+ + S+E L++ C+L
Sbjct: 187 AMSDAQVTIELSSPTLKSVYFDGISLDKFILEADSIEFLHMKDCVL 232
>sp|Q969U6|FBXW5_HUMAN F-box/WD repeat-containing protein 5 OS=Homo sapiens GN=FBXW5
PE=1 SV=1
Length = 566
Score = 31.2 bits (69), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 18 ILVKIFMALRVTDLIFAVSKVCSSWRAASRDPVLWE 53
++ +IF++L D + A VC W+A SRD LW
Sbjct: 13 LVYQIFLSLGPAD-VLAAGLVCRQWQAVSRDEFLWR 47
>sp|O49624|FB242_ARATH Putative F-box protein At4g22180 OS=Arabidopsis thaliana
GN=At4g22180 PE=4 SV=3
Length = 402
Score = 31.2 bits (69), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 4 QGSNSRNWQNMHYDILVKIFMALRVTDLIFAVSKVCSSWRAASRDPV 50
+G +W + D+L +F L + A S VCSSW + SR V
Sbjct: 14 RGDTPNSWSELPLDLLTAVFERLSYANFQRAKS-VCSSWHSGSRQSV 59
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.137 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,943,198
Number of Sequences: 539616
Number of extensions: 4177342
Number of successful extensions: 11360
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 11309
Number of HSP's gapped (non-prelim): 77
length of query: 307
length of database: 191,569,459
effective HSP length: 117
effective length of query: 190
effective length of database: 128,434,387
effective search space: 24402533530
effective search space used: 24402533530
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)