Query 037161
Match_columns 99
No_of_seqs 171 out of 1066
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 15:41:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037161.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037161hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 100.0 2.1E-28 7.3E-33 171.1 11.3 94 1-99 252-345 (353)
2 3p9c_A Caffeic acid O-methyltr 99.9 2.1E-23 7.1E-28 146.3 11.8 98 1-99 267-364 (364)
3 3reo_A (ISO)eugenol O-methyltr 99.9 1.5E-22 5.2E-27 142.0 11.6 98 1-99 269-366 (368)
4 3lst_A CALO1 methyltransferase 99.8 1.6E-20 5.4E-25 130.6 10.7 93 1-99 255-347 (348)
5 3gwz_A MMCR; methyltransferase 99.8 1E-20 3.5E-25 132.6 8.9 92 1-99 276-368 (369)
6 1zg3_A Isoflavanone 4'-O-methy 99.8 2.2E-20 7.4E-25 130.3 9.9 97 1-99 259-358 (358)
7 3i53_A O-methyltransferase; CO 99.8 1.9E-20 6.5E-25 129.3 9.1 89 1-99 243-331 (332)
8 2ip2_A Probable phenazine-spec 99.8 5.8E-20 2E-24 126.7 9.6 93 1-99 241-333 (334)
9 1fp2_A Isoflavone O-methyltran 99.8 2E-19 6.9E-24 125.1 10.8 96 1-99 254-352 (352)
10 1fp1_D Isoliquiritigenin 2'-O- 99.8 1.3E-19 4.5E-24 127.0 9.2 97 1-99 275-372 (372)
11 3mcz_A O-methyltransferase; ad 99.8 2.9E-18 1E-22 118.9 9.5 93 1-99 256-348 (352)
12 3dp7_A SAM-dependent methyltra 99.8 1.3E-18 4.6E-23 121.7 7.5 97 1-99 256-354 (363)
13 1tw3_A COMT, carminomycin 4-O- 99.7 6.6E-18 2.3E-22 117.4 6.5 93 1-99 257-355 (360)
14 2r3s_A Uncharacterized protein 99.7 3.9E-17 1.3E-21 112.3 9.0 94 1-98 240-333 (335)
15 1qzz_A RDMB, aclacinomycin-10- 99.7 1.7E-17 5.8E-22 115.7 6.4 93 1-99 256-355 (374)
16 1x19_A CRTF-related protein; m 99.7 2E-16 6.9E-21 110.2 10.0 91 1-99 264-358 (359)
17 3dtn_A Putative methyltransfer 99.1 5.7E-10 1.9E-14 72.8 7.2 96 1-99 117-225 (234)
18 4gek_A TRNA (CMO5U34)-methyltr 99.0 2.5E-09 8.7E-14 71.9 8.4 95 2-99 148-256 (261)
19 3hnr_A Probable methyltransfer 98.8 2.2E-08 7.4E-13 64.6 8.3 94 1-99 114-211 (220)
20 3bxo_A N,N-dimethyltransferase 98.8 2.3E-09 8E-14 69.8 3.1 97 2-99 110-238 (239)
21 3dh0_A SAM dependent methyltra 98.7 6.9E-08 2.3E-12 62.2 8.7 79 1-99 114-192 (219)
22 3pfg_A N-methyltransferase; N, 98.7 4.8E-09 1.6E-13 69.6 2.9 97 2-99 120-248 (263)
23 1kpg_A CFA synthase;, cyclopro 98.7 6.3E-08 2.2E-12 64.9 7.5 87 1-88 137-228 (287)
24 1xtp_A LMAJ004091AAA; SGPP, st 98.7 5.2E-08 1.8E-12 64.0 6.9 74 1-89 166-239 (254)
25 2ex4_A Adrenal gland protein A 98.7 5.9E-08 2E-12 63.6 7.0 73 1-89 154-226 (241)
26 3ou2_A SAM-dependent methyltra 98.6 8.8E-08 3E-12 61.4 6.6 85 1-88 115-205 (218)
27 3h2b_A SAM-dependent methyltra 98.6 8.5E-08 2.9E-12 61.1 6.4 82 1-97 110-192 (203)
28 1xxl_A YCGJ protein; structura 98.6 1.4E-07 4.7E-12 61.9 7.2 80 1-88 95-174 (239)
29 1ve3_A Hypothetical protein PH 98.6 1.5E-08 5E-13 65.5 2.4 95 2-99 112-226 (227)
30 2qe6_A Uncharacterized protein 98.6 5E-08 1.7E-12 65.9 5.0 74 1-84 165-238 (274)
31 3ujc_A Phosphoethanolamine N-m 98.6 1.6E-07 5.4E-12 61.8 7.3 80 1-89 128-207 (266)
32 3dlc_A Putative S-adenosyl-L-m 98.6 7.8E-09 2.7E-13 66.2 0.8 91 1-95 119-210 (219)
33 1vl5_A Unknown conserved prote 98.6 1.9E-07 6.4E-12 61.8 7.5 79 1-88 111-190 (260)
34 3ocj_A Putative exported prote 98.6 4.9E-07 1.7E-11 61.4 9.6 96 2-99 196-303 (305)
35 3g2m_A PCZA361.24; SAM-depende 98.6 8.9E-08 3E-12 64.7 5.7 97 2-99 160-291 (299)
36 2fk8_A Methoxy mycolic acid sy 98.5 4.4E-07 1.5E-11 61.7 8.4 87 1-88 163-254 (318)
37 3bus_A REBM, methyltransferase 98.5 2.5E-07 8.7E-12 61.4 6.6 80 2-89 138-217 (273)
38 3lcc_A Putative methyl chlorid 98.5 2.1E-07 7.3E-12 60.6 6.1 69 1-89 140-208 (235)
39 3sm3_A SAM-dependent methyltra 98.5 4E-07 1.4E-11 58.8 7.0 83 1-87 109-206 (235)
40 2o57_A Putative sarcosine dime 98.5 3.7E-07 1.3E-11 61.4 7.0 77 1-88 158-234 (297)
41 3dli_A Methyltransferase; PSI- 98.5 7E-07 2.4E-11 58.4 7.9 77 1-89 109-185 (240)
42 3i9f_A Putative type 11 methyl 98.5 4.7E-07 1.6E-11 56.1 6.6 76 1-98 83-158 (170)
43 3hem_A Cyclopropane-fatty-acyl 98.4 1E-06 3.5E-11 59.5 8.2 87 2-89 146-244 (302)
44 3d2l_A SAM-dependent methyltra 98.4 6.9E-07 2.4E-11 58.1 7.0 96 2-99 106-242 (243)
45 3e23_A Uncharacterized protein 98.4 6.5E-07 2.2E-11 57.4 6.1 72 1-88 110-182 (211)
46 4fsd_A Arsenic methyltransfera 98.4 1.4E-06 4.9E-11 61.1 7.8 76 2-87 175-250 (383)
47 2zfu_A Nucleomethylin, cerebra 98.4 7.9E-07 2.7E-11 57.1 6.1 67 2-99 124-190 (215)
48 1y8c_A S-adenosylmethionine-de 98.4 4.2E-07 1.5E-11 59.0 4.5 95 2-99 111-244 (246)
49 3mgg_A Methyltransferase; NYSG 98.4 6.8E-07 2.3E-11 59.4 5.6 82 1-88 113-198 (276)
50 1nkv_A Hypothetical protein YJ 98.3 6.7E-07 2.3E-11 58.7 5.2 76 2-88 112-187 (256)
51 3l8d_A Methyltransferase; stru 98.3 1.1E-06 3.9E-11 57.1 6.2 77 1-88 124-200 (242)
52 3e8s_A Putative SAM dependent 98.3 8.8E-07 3E-11 56.8 5.0 79 2-87 125-208 (227)
53 3vc1_A Geranyl diphosphate 2-C 98.3 1.9E-06 6.5E-11 58.6 6.6 76 2-88 194-269 (312)
54 2p7i_A Hypothetical protein; p 98.3 1.8E-06 6E-11 56.0 5.7 78 1-88 111-199 (250)
55 2aot_A HMT, histamine N-methyl 98.2 3.1E-06 1.1E-10 57.0 6.4 75 1-86 143-219 (292)
56 1vlm_A SAM-dependent methyltra 98.2 3.1E-06 1.1E-10 54.6 6.1 79 1-88 110-188 (219)
57 3bkx_A SAM-dependent methyltra 98.2 7.1E-06 2.4E-10 54.4 7.2 84 1-88 130-219 (275)
58 2ld4_A Anamorsin; methyltransf 98.2 6E-06 2.1E-10 51.5 6.4 61 2-87 72-133 (176)
59 3bkw_A MLL3908 protein, S-aden 98.2 2E-05 6.7E-10 51.1 9.0 85 1-88 115-214 (243)
60 3f4k_A Putative methyltransfer 98.1 5.3E-06 1.8E-10 54.4 6.3 75 2-89 123-197 (257)
61 4htf_A S-adenosylmethionine-de 98.1 7E-06 2.4E-10 54.8 5.9 83 1-89 144-233 (285)
62 3cgg_A SAM-dependent methyltra 98.1 1.5E-05 5.1E-10 49.7 6.8 59 2-88 117-175 (195)
63 3g5l_A Putative S-adenosylmeth 98.0 4.4E-06 1.5E-10 54.8 4.1 85 1-88 116-216 (253)
64 3ggd_A SAM-dependent methyltra 98.0 1.2E-05 4.2E-10 52.4 6.2 82 1-88 132-219 (245)
65 4e2x_A TCAB9; kijanose, tetron 98.0 1.3E-05 4.3E-10 56.5 6.6 76 1-89 179-254 (416)
66 3kkz_A Uncharacterized protein 98.0 8.7E-06 3E-10 53.9 5.4 75 2-89 123-197 (267)
67 2xvm_A Tellurite resistance pr 98.0 1.4E-05 4.8E-10 50.2 5.8 68 1-87 105-172 (199)
68 3cc8_A Putative methyltransfer 98.0 2.7E-06 9.2E-11 54.6 2.2 79 1-89 101-186 (230)
69 3ege_A Putative methyltransfer 97.9 2.1E-05 7E-10 52.1 5.9 77 1-88 102-178 (261)
70 3giw_A Protein of unknown func 97.9 2.1E-05 7.3E-10 53.5 5.9 74 2-84 169-243 (277)
71 3gu3_A Methyltransferase; alph 97.9 9.7E-06 3.3E-10 54.4 4.0 81 2-87 98-189 (284)
72 2p8j_A S-adenosylmethionine-de 97.9 6.2E-06 2.1E-10 52.4 2.8 84 2-86 98-181 (209)
73 2yqz_A Hypothetical protein TT 97.8 2.3E-05 7.9E-10 51.3 4.9 79 2-86 113-194 (263)
74 3jwh_A HEN1; methyltransferase 97.8 4.1E-05 1.4E-09 49.1 5.9 75 1-84 110-188 (217)
75 3jwg_A HEN1, methyltransferase 97.8 7.3E-05 2.5E-09 47.9 7.0 76 1-85 110-189 (219)
76 1ri5_A MRNA capping enzyme; me 97.8 2.5E-05 8.7E-10 52.0 4.8 86 2-88 142-250 (298)
77 2a14_A Indolethylamine N-methy 97.8 2.9E-05 1E-09 51.6 5.0 65 9-88 174-238 (263)
78 2i62_A Nicotinamide N-methyltr 97.8 2.9E-05 1E-09 50.9 4.9 66 9-89 175-240 (265)
79 3ccf_A Cyclopropane-fatty-acyl 97.8 6.9E-05 2.4E-09 49.9 6.3 79 2-88 126-210 (279)
80 1fbn_A MJ fibrillarin homologu 97.8 6.3E-05 2.2E-09 48.9 5.9 77 2-99 147-227 (230)
81 3thr_A Glycine N-methyltransfe 97.7 3.6E-05 1.2E-09 51.4 4.4 33 1-34 139-176 (293)
82 2g72_A Phenylethanolamine N-me 97.7 2.4E-05 8.2E-10 52.4 3.0 64 10-88 193-256 (289)
83 1pjz_A Thiopurine S-methyltran 97.7 0.0001 3.5E-09 47.2 5.9 68 2-89 110-177 (203)
84 2kw5_A SLR1183 protein; struct 97.5 0.00036 1.2E-08 44.0 6.9 69 4-88 103-171 (202)
85 3grz_A L11 mtase, ribosomal pr 97.5 0.00012 4.1E-09 46.5 4.5 65 5-99 132-196 (205)
86 2p35_A Trans-aconitate 2-methy 97.5 0.00016 5.3E-09 47.3 5.0 76 2-83 104-185 (259)
87 3g07_A 7SK snRNA methylphospha 97.4 3E-05 1E-09 52.4 0.4 75 5-88 193-269 (292)
88 1wzn_A SAM-dependent methyltra 97.2 0.0016 5.5E-08 42.3 6.9 28 3-31 116-143 (252)
89 2vdw_A Vaccinia virus capping 96.9 0.00096 3.3E-08 45.5 4.4 86 2-88 138-246 (302)
90 2nxc_A L11 mtase, ribosomal pr 96.9 0.005 1.7E-07 40.6 7.7 64 5-99 191-254 (254)
91 3m70_A Tellurite resistance pr 96.9 0.0014 4.6E-08 43.6 4.8 66 2-86 193-258 (286)
92 2gs9_A Hypothetical protein TT 96.8 0.0017 5.7E-08 41.1 4.7 74 1-86 103-176 (211)
93 2gb4_A Thiopurine S-methyltran 96.8 0.0033 1.1E-07 41.7 6.1 67 2-88 161-227 (252)
94 4df3_A Fibrillarin-like rRNA/T 96.7 0.002 6.8E-08 42.7 4.6 60 10-90 160-219 (233)
95 2b3t_A Protein methyltransfera 96.6 0.01 3.5E-07 39.4 7.1 60 9-99 215-275 (276)
96 1g8a_A Fibrillarin-like PRE-rR 96.5 0.0054 1.8E-07 39.3 5.4 76 2-99 147-226 (227)
97 3p2e_A 16S rRNA methylase; met 96.5 0.0015 5.1E-08 42.6 2.4 68 12-89 119-186 (225)
98 3e05_A Precorrin-6Y C5,15-meth 96.3 0.0088 3E-07 37.7 5.3 51 4-85 114-164 (204)
99 2ipx_A RRNA 2'-O-methyltransfe 96.3 0.0047 1.6E-07 39.9 4.1 69 8-98 158-230 (233)
100 3mq2_A 16S rRNA methyltransfer 96.1 0.0057 1.9E-07 38.9 3.8 66 12-89 120-185 (218)
101 3opn_A Putative hemolysin; str 96.1 0.0029 1E-07 41.5 2.2 68 12-88 117-184 (232)
102 1zx0_A Guanidinoacetate N-meth 96.0 0.0029 9.9E-08 41.0 1.8 64 3-82 141-204 (236)
103 3iei_A Leucine carboxyl methyl 95.9 0.018 6E-07 40.0 5.8 78 2-88 200-281 (334)
104 3bgv_A MRNA CAP guanine-N7 met 95.9 0.0099 3.4E-07 40.0 4.2 85 2-88 123-232 (313)
105 1rjd_A PPM1P, carboxy methyl t 95.7 0.036 1.2E-06 38.4 6.6 76 2-81 203-281 (334)
106 1af7_A Chemotaxis receptor met 95.7 0.0049 1.7E-07 41.6 2.1 30 1-31 221-250 (274)
107 3g5t_A Trans-aconitate 3-methy 95.5 0.011 3.7E-07 39.6 3.4 30 2-35 122-151 (299)
108 3ofk_A Nodulation protein S; N 95.5 0.0093 3.2E-07 37.7 2.9 33 1-34 122-155 (216)
109 3id6_C Fibrillarin-like rRNA/T 95.5 0.027 9.1E-07 37.1 5.0 76 2-98 150-229 (232)
110 1dus_A MJ0882; hypothetical pr 95.2 0.024 8.3E-07 34.8 3.9 63 6-99 131-193 (194)
111 3bwc_A Spermidine synthase; SA 95.1 0.06 2.1E-06 36.4 6.1 51 12-88 190-240 (304)
112 3orh_A Guanidinoacetate N-meth 95.1 0.0043 1.5E-07 40.5 0.3 63 7-85 145-207 (236)
113 3hp7_A Hemolysin, putative; st 95.0 0.025 8.6E-07 38.5 4.0 68 12-88 165-232 (291)
114 1l3i_A Precorrin-6Y methyltran 94.9 0.038 1.3E-06 33.8 4.3 45 9-83 111-155 (192)
115 3lpm_A Putative methyltransfer 94.8 0.089 3.1E-06 34.4 6.2 60 9-99 153-218 (259)
116 4dzr_A Protein-(glutamine-N5) 94.7 0.037 1.3E-06 34.5 4.0 56 12-97 144-202 (215)
117 2uyo_A Hypothetical protein ML 94.7 0.05 1.7E-06 37.3 4.9 77 2-83 188-274 (310)
118 3m33_A Uncharacterized protein 94.4 0.0068 2.3E-07 39.0 -0.0 47 11-88 121-167 (226)
119 3evz_A Methyltransferase; NYSG 94.4 0.084 2.9E-06 33.6 5.2 50 11-89 158-207 (230)
120 2h00_A Methyltransferase 10 do 94.2 0.00032 1.1E-08 46.0 -6.8 68 12-89 172-239 (254)
121 3duw_A OMT, O-methyltransferas 93.9 0.11 3.8E-06 32.9 4.9 34 2-36 137-170 (223)
122 3htx_A HEN1; HEN1, small RNA m 93.5 0.3 1E-05 38.2 7.3 86 1-89 804-898 (950)
123 3mb5_A SAM-dependent methyltra 93.1 0.03 1E-06 36.4 1.2 55 2-88 166-222 (255)
124 3q87_B N6 adenine specific DNA 93.0 0.42 1.4E-05 29.2 6.4 49 10-89 102-150 (170)
125 3iv6_A Putative Zn-dependent a 92.8 0.13 4.5E-06 34.4 4.0 31 2-34 119-149 (261)
126 2zwa_A Leucine carboxyl methyl 92.7 0.79 2.7E-05 34.4 8.5 81 2-87 226-308 (695)
127 4hg2_A Methyltransferase type 92.6 0.086 3E-06 34.9 2.9 32 2-37 108-139 (257)
128 2pwy_A TRNA (adenine-N(1)-)-me 92.3 0.043 1.5E-06 35.5 1.1 53 3-87 171-223 (258)
129 3r3h_A O-methyltransferase, SA 92.3 0.27 9.2E-06 32.0 5.0 33 4-37 142-174 (242)
130 2hnk_A SAM-dependent O-methylt 92.1 0.17 5.9E-06 32.5 3.9 33 3-36 152-184 (239)
131 3b5i_A S-adenosyl-L-methionine 91.9 0.84 2.9E-05 32.1 7.4 77 10-88 203-298 (374)
132 3uwp_A Histone-lysine N-methyl 91.8 0.1 3.4E-06 37.6 2.6 31 9-40 265-295 (438)
133 2pxx_A Uncharacterized protein 91.4 0.065 2.2E-06 33.4 1.2 27 8-35 135-161 (215)
134 1yb2_A Hypothetical protein TA 91.0 0.067 2.3E-06 35.4 1.0 52 4-87 185-236 (275)
135 3tfw_A Putative O-methyltransf 90.8 0.22 7.4E-06 32.4 3.3 32 3-35 141-172 (248)
136 2avn_A Ubiquinone/menaquinone 90.6 0.07 2.4E-06 34.8 0.8 79 3-89 124-214 (260)
137 3tr6_A O-methyltransferase; ce 90.2 0.12 4.1E-06 32.7 1.6 34 3-37 145-178 (225)
138 1o54_A SAM-dependent O-methylt 90.1 0.13 4.3E-06 34.0 1.7 27 4-33 187-213 (277)
139 2efj_A 3,7-dimethylxanthine me 90.0 0.92 3.1E-05 32.0 6.1 75 12-87 205-291 (384)
140 2pjd_A Ribosomal RNA small sub 89.9 0.11 3.9E-06 35.5 1.4 28 6-34 277-304 (343)
141 1m6e_X S-adenosyl-L-methionnin 89.5 4 0.00014 28.5 9.3 75 10-86 187-278 (359)
142 1xdz_A Methyltransferase GIDB; 88.7 0.57 2E-05 30.1 4.1 50 11-88 153-202 (240)
143 2b25_A Hypothetical protein; s 87.7 0.038 1.3E-06 37.7 -2.2 71 14-88 201-281 (336)
144 3mti_A RRNA methylase; SAM-dep 87.4 0.34 1.2E-05 29.6 2.2 59 9-89 112-170 (185)
145 3c3p_A Methyltransferase; NP_9 87.1 0.14 4.8E-06 32.2 0.3 32 3-35 131-162 (210)
146 1o9g_A RRNA methyltransferase; 87.0 0.9 3.1E-05 29.3 4.2 26 8-34 190-215 (250)
147 2qy6_A UPF0209 protein YFCK; s 86.8 0.36 1.2E-05 32.1 2.3 36 62-97 206-244 (257)
148 1nt2_A Fibrillarin-like PRE-rR 86.4 0.33 1.1E-05 30.9 1.9 23 9-32 138-160 (210)
149 3ntv_A MW1564 protein; rossman 86.1 0.13 4.6E-06 33.0 -0.1 32 3-35 147-178 (232)
150 1u2z_A Histone-lysine N-methyl 86.1 0.5 1.7E-05 33.9 2.8 30 9-39 336-365 (433)
151 2nyu_A Putative ribosomal RNA 85.4 0.49 1.7E-05 29.1 2.2 22 12-34 125-146 (196)
152 1sui_A Caffeoyl-COA O-methyltr 85.4 0.65 2.2E-05 30.3 2.9 31 4-35 162-192 (247)
153 3hm2_A Precorrin-6Y C5,15-meth 85.3 0.62 2.1E-05 28.0 2.7 22 12-34 107-128 (178)
154 2frn_A Hypothetical protein PH 85.3 2 6.7E-05 28.4 5.3 50 11-84 204-253 (278)
155 3c3y_A Pfomt, O-methyltransfer 85.1 0.43 1.5E-05 30.8 1.9 32 2-34 151-182 (237)
156 1ssz_A Pulmonary surfactant-as 85.0 0.48 1.6E-05 21.2 1.5 18 11-29 4-21 (34)
157 2gpy_A O-methyltransferase; st 84.9 0.15 5.3E-06 32.5 -0.3 31 4-35 132-162 (233)
158 2avd_A Catechol-O-methyltransf 84.8 0.33 1.1E-05 30.7 1.3 31 4-35 151-181 (229)
159 3fpf_A Mtnas, putative unchara 84.8 0.91 3.1E-05 31.0 3.5 23 10-33 200-222 (298)
160 3eey_A Putative rRNA methylase 84.7 0.74 2.5E-05 28.3 2.8 26 9-35 116-141 (197)
161 1ixk_A Methyltransferase; open 84.0 0.67 2.3E-05 31.4 2.6 24 12-36 226-249 (315)
162 3cbg_A O-methyltransferase; cy 83.8 0.51 1.7E-05 30.3 1.8 33 3-36 153-185 (232)
163 1ej0_A FTSJ; methyltransferase 83.8 0.83 2.8E-05 27.0 2.7 22 12-34 116-137 (180)
164 3p9n_A Possible methyltransfer 83.8 1.9 6.6E-05 26.3 4.5 29 6-35 125-155 (189)
165 2vz8_A Fatty acid synthase; tr 83.7 0.3 1E-05 41.9 0.8 75 2-87 1320-1394(2512)
166 3dr5_A Putative O-methyltransf 82.9 0.47 1.6E-05 30.4 1.4 32 3-35 134-165 (221)
167 3sso_A Methyltransferase; macr 82.9 0.32 1.1E-05 34.9 0.6 29 4-35 298-326 (419)
168 2plw_A Ribosomal RNA methyltra 81.6 0.72 2.5E-05 28.4 1.9 20 12-32 134-153 (201)
169 3bzb_A Uncharacterized protein 80.7 1.8 6.1E-05 28.6 3.6 28 2-32 172-204 (281)
170 2cz4_A Hypothetical protein TT 79.9 3.2 0.00011 24.4 4.2 27 7-34 82-110 (119)
171 3ajd_A Putative methyltransfer 79.8 1.4 4.8E-05 29.0 2.9 25 12-37 191-215 (274)
172 2qm3_A Predicted methyltransfe 79.6 1.7 5.9E-05 30.0 3.4 25 11-36 256-280 (373)
173 2vdv_E TRNA (guanine-N(7)-)-me 79.5 0.49 1.7E-05 30.5 0.6 20 12-32 153-172 (246)
174 2fca_A TRNA (guanine-N(7)-)-me 79.1 1.8 6.1E-05 27.3 3.1 21 12-33 133-153 (213)
175 3dou_A Ribosomal RNA large sub 78.7 1.4 4.7E-05 27.6 2.5 23 11-34 118-140 (191)
176 3njr_A Precorrin-6Y methylase; 77.6 2.1 7.2E-05 26.8 3.1 43 14-86 136-178 (204)
177 2dwf_A Pulmonary surfactant-as 77.1 1.3 4.6E-05 20.1 1.5 18 11-29 4-21 (34)
178 2bm8_A Cephalosporin hydroxyla 76.5 1.6 5.6E-05 28.1 2.4 24 10-34 164-188 (236)
179 1yzh_A TRNA (guanine-N(7)-)-me 76.3 2.3 7.8E-05 26.6 3.0 20 12-32 136-155 (214)
180 2frx_A Hypothetical protein YE 76.1 2.5 8.4E-05 30.6 3.5 25 12-37 226-250 (479)
181 3ckk_A TRNA (guanine-N(7)-)-me 75.9 1.1 3.6E-05 29.1 1.4 20 12-32 148-167 (235)
182 2yvl_A TRMI protein, hypotheti 75.0 1.6 5.6E-05 27.7 2.1 22 12-34 170-191 (248)
183 2y1w_A Histone-arginine methyl 75.0 0.51 1.7E-05 32.4 -0.4 30 2-32 125-154 (348)
184 2p41_A Type II methyltransfera 74.7 4 0.00014 27.6 4.1 19 12-31 171-189 (305)
185 4dcm_A Ribosomal RNA large sub 74.5 1.2 4E-05 31.1 1.4 27 6-33 308-334 (375)
186 2yxl_A PH0851 protein, 450AA l 74.4 1.1 3.6E-05 32.0 1.2 25 12-37 369-393 (450)
187 1inl_A Spermidine synthase; be 74.4 0.71 2.4E-05 31.0 0.3 20 12-32 185-204 (296)
188 3dmg_A Probable ribosomal RNA 74.3 1.9 6.5E-05 30.1 2.4 26 7-33 315-340 (381)
189 3adn_A Spermidine synthase; am 73.1 1.4 4.9E-05 29.6 1.5 21 12-33 178-198 (294)
190 2ozv_A Hypothetical protein AT 71.4 1.2 4.1E-05 29.1 0.8 22 10-32 148-169 (260)
191 1wg8_A Predicted S-adenosylmet 71.1 2.2 7.7E-05 29.0 2.1 27 9-36 210-236 (285)
192 1sqg_A SUN protein, FMU protei 71.1 1.7 5.7E-05 30.7 1.5 25 12-37 354-378 (429)
193 3tka_A Ribosomal RNA small sub 70.8 2.3 7.7E-05 29.8 2.1 26 9-35 251-276 (347)
194 1i9g_A Hypothetical protein RV 70.3 1.1 3.6E-05 29.3 0.3 21 13-34 184-204 (280)
195 3dxy_A TRNA (guanine-N(7)-)-me 70.1 1.8 6.1E-05 27.6 1.4 20 13-33 131-150 (218)
196 2km1_A Protein DRE2; yeast, an 69.8 2.7 9.1E-05 25.5 2.0 19 12-31 78-96 (136)
197 3u81_A Catechol O-methyltransf 69.6 2.4 8.3E-05 26.6 1.9 23 11-35 150-172 (221)
198 3m6w_A RRNA methylase; rRNA me 69.5 2.4 8.1E-05 30.6 2.1 24 12-36 209-232 (464)
199 2yxd_A Probable cobalt-precorr 68.1 10 0.00036 22.3 4.6 18 68-85 137-154 (183)
200 2cmg_A Spermidine synthase; tr 67.7 1.7 5.7E-05 28.8 0.9 28 2-32 143-170 (262)
201 1p91_A Ribosomal RNA large sub 67.6 2.2 7.6E-05 27.5 1.5 21 14-35 160-180 (269)
202 2xyq_A Putative 2'-O-methyl tr 67.3 2.7 9.4E-05 28.4 1.9 23 10-33 149-171 (290)
203 3b3j_A Histone-arginine methyl 67.3 0.79 2.7E-05 33.1 -0.8 28 3-31 234-261 (480)
204 1whz_A Hypothetical protein; a 67.3 4.8 0.00016 21.0 2.5 20 66-85 5-24 (70)
205 2hiy_A Hypothetical protein; C 67.1 13 0.00044 23.3 4.9 34 62-96 17-51 (183)
206 1jsx_A Glucose-inhibited divis 65.6 1.6 5.6E-05 26.9 0.5 21 11-32 144-164 (207)
207 1uir_A Polyamine aminopropyltr 65.2 1.3 4.5E-05 29.9 -0.0 22 11-33 174-195 (314)
208 2i7c_A Spermidine synthase; tr 60.6 3.8 0.00013 27.2 1.6 20 12-32 172-191 (283)
209 1mjf_A Spermidine synthase; sp 60.4 3.4 0.00012 27.3 1.3 20 12-32 173-192 (281)
210 4fzv_A Putative methyltransfer 60.2 2.9 0.0001 29.1 1.0 25 12-37 264-288 (359)
211 1m6y_A S-adenosyl-methyltransf 59.8 3.3 0.00011 28.0 1.2 25 9-34 222-246 (301)
212 2igt_A SAM dependent methyltra 59.7 12 0.0004 25.5 4.0 24 10-34 250-273 (332)
213 3tma_A Methyltransferase; thum 56.5 13 0.00045 25.2 3.8 21 12-33 297-317 (354)
214 1cee_B Wiskott-aldrich syndrom 55.9 5.4 0.00018 20.4 1.4 19 67-85 34-52 (59)
215 1iy9_A Spermidine synthase; ro 55.8 4.2 0.00014 26.9 1.2 20 12-32 169-188 (275)
216 1xj5_A Spermidine synthase 1; 55.7 4.5 0.00015 27.7 1.3 21 11-32 214-234 (334)
217 2b2c_A Spermidine synthase; be 55.6 3.9 0.00013 27.8 1.0 21 12-33 202-222 (314)
218 2pt6_A Spermidine synthase; tr 55.5 4.6 0.00016 27.4 1.3 20 12-32 210-229 (321)
219 2o07_A Spermidine synthase; st 55.4 4.3 0.00015 27.3 1.2 22 11-33 188-209 (304)
220 2yxe_A Protein-L-isoaspartate 55.1 5.4 0.00018 24.7 1.6 17 16-33 161-177 (215)
221 1wxx_A TT1595, hypothetical pr 54.9 7.6 0.00026 26.8 2.4 25 9-34 302-326 (382)
222 3gjy_A Spermidine synthase; AP 54.5 5.4 0.00019 27.3 1.6 22 12-34 180-201 (317)
223 3lbf_A Protein-L-isoaspartate 54.5 5.1 0.00018 24.7 1.4 17 17-34 159-175 (210)
224 1vbf_A 231AA long hypothetical 53.6 6.4 0.00022 24.6 1.8 17 17-34 150-166 (231)
225 3aaf_A Werner syndrome ATP-dep 53.6 6.7 0.00023 23.3 1.7 68 9-84 16-86 (134)
226 2lmc_A Bacterial RNA polymeras 53.5 18 0.0006 19.7 3.2 25 65-89 53-81 (84)
227 2lnh_A N-WAsp, neural wiskott- 53.3 4 0.00014 21.5 0.6 17 68-84 24-40 (65)
228 2c71_A Glycoside hydrolase, fa 53.1 10 0.00036 24.0 2.7 30 4-34 127-157 (216)
229 2as0_A Hypothetical protein PH 53.1 7.6 0.00026 26.9 2.2 25 9-34 312-336 (396)
230 3a27_A TYW2, uncharacterized p 52.9 3.5 0.00012 27.1 0.4 28 10-38 197-224 (272)
231 2oxt_A Nucleoside-2'-O-methylt 52.8 7.6 0.00026 25.6 2.1 22 12-34 163-186 (265)
232 3g89_A Ribosomal RNA small sub 51.6 5.4 0.00019 25.9 1.2 50 11-88 163-212 (249)
233 2h80_A STAR-related lipid tran 51.4 5.5 0.00019 21.7 1.0 20 64-83 17-36 (81)
234 1vfj_A Nitrogen regulatory pro 50.7 22 0.00075 20.3 3.6 26 7-33 66-95 (116)
235 3fpn_B Geobacillus stearotherm 50.0 6.5 0.00022 22.5 1.2 28 62-89 19-46 (106)
236 2ns1_B Nitrogen regulatory pro 49.8 18 0.0006 20.8 3.1 27 7-34 70-100 (116)
237 1i1n_A Protein-L-isoaspartate 48.0 3.2 0.00011 26.0 -0.4 20 13-33 163-182 (226)
238 2zig_A TTHA0409, putative modi 47.9 10 0.00035 25.2 2.1 20 12-32 77-96 (297)
239 3ouv_A Serine/threonine protei 47.8 27 0.00094 17.8 3.6 22 65-86 15-36 (71)
240 1hwu_A PII protein; herbaspiri 47.2 27 0.00093 19.7 3.6 26 7-33 66-95 (112)
241 2ift_A Putative methylase HI07 47.2 7.5 0.00026 24.1 1.3 25 10-35 139-165 (201)
242 2wa2_A Non-structural protein 46.5 11 0.00037 25.0 2.1 21 12-33 171-193 (276)
243 2esr_A Methyltransferase; stru 45.2 16 0.00054 21.7 2.5 25 10-35 114-140 (177)
244 3t9z_A GLNK3, nitrogen regulat 45.1 29 0.001 20.1 3.6 27 7-34 66-96 (118)
245 3czq_A Putative polyphosphate 45.1 17 0.00057 24.9 2.8 66 13-86 131-196 (304)
246 2jso_A Polymyxin resistance pr 45.0 14 0.00048 20.4 2.0 18 62-79 68-85 (88)
247 1f3m_A Serine/threonine-protei 44.8 12 0.00043 20.3 1.8 21 65-85 28-48 (80)
248 3dfe_A Putative PII-like signa 44.8 40 0.0014 19.3 4.1 28 7-34 69-97 (111)
249 3ncq_A Nitrogen regulatory pro 44.8 30 0.001 20.1 3.6 28 7-34 66-96 (119)
250 2eg2_A Nitrogen regulatory pro 44.4 32 0.0011 19.4 3.6 28 7-34 66-96 (112)
251 1nv8_A HEMK protein; class I a 44.3 16 0.00055 24.1 2.6 19 12-31 228-247 (284)
252 3m4x_A NOL1/NOP2/SUN family pr 43.9 11 0.00039 27.0 1.9 24 12-36 214-237 (456)
253 4aff_A Nitrogen regulatory pro 43.8 29 0.00099 20.0 3.4 27 7-34 66-96 (116)
254 1jg1_A PIMT;, protein-L-isoasp 43.6 10 0.00035 23.9 1.6 17 16-33 173-189 (235)
255 2pbf_A Protein-L-isoaspartate 43.6 4.3 0.00015 25.4 -0.3 20 14-34 175-194 (227)
256 2rbg_A Putative uncharacterize 43.5 13 0.00045 21.9 1.8 29 3-33 67-95 (126)
257 1ws6_A Methyltransferase; stru 43.4 13 0.00045 21.6 2.0 20 14-34 127-148 (171)
258 3lcv_B Sisomicin-gentamicin re 42.9 11 0.00038 25.5 1.6 62 2-84 207-268 (281)
259 3l7p_A Putative nitrogen regul 42.6 35 0.0012 19.6 3.6 26 7-33 69-98 (115)
260 3mhy_A PII-like protein PZ; PI 42.1 29 0.00098 19.8 3.2 27 7-33 66-95 (112)
261 2fyt_A Protein arginine N-meth 41.6 9.5 0.00033 25.9 1.2 21 9-30 148-168 (340)
262 2fpo_A Methylase YHHF; structu 41.4 14 0.00049 22.8 1.9 24 11-35 137-162 (202)
263 1mhm_B Adometdc, samdc, S-aden 41.3 41 0.0014 18.0 4.0 29 62-90 36-64 (72)
264 4dmg_A Putative uncharacterize 40.9 15 0.00052 25.7 2.2 24 11-35 305-328 (393)
265 3ce8_A Putative PII-like nitro 40.6 30 0.001 20.3 3.1 26 7-33 86-112 (120)
266 2dky_A RHO-GTPase-activating p 40.5 9 0.00031 21.3 0.7 19 65-83 20-38 (91)
267 3vyw_A MNMC2; tRNA wobble urid 40.5 38 0.0013 23.1 4.1 30 68-97 228-257 (308)
268 1g6q_1 HnRNP arginine N-methyl 40.2 14 0.00047 24.9 1.8 20 11-31 124-143 (328)
269 1ej5_A WAsp, wiskott-aldrich s 40.1 17 0.00059 20.9 2.0 17 68-84 23-39 (107)
270 3bzq_A Nitrogen regulatory pro 39.7 26 0.00088 19.9 2.7 28 7-34 68-98 (114)
271 2gw8_A PII signal transduction 39.7 32 0.0011 19.5 3.1 28 7-34 68-98 (114)
272 2g7j_A Putative cytoplasmic pr 38.9 33 0.0011 19.9 3.0 20 67-86 4-23 (124)
273 2wbr_A GW182, gawky, LD47780P; 38.7 50 0.0017 18.2 4.0 33 64-97 17-50 (89)
274 1dl5_A Protein-L-isoaspartate 38.6 14 0.00049 24.6 1.7 18 16-34 159-176 (317)
275 3r0q_C Probable protein argini 38.4 7 0.00024 27.0 0.1 26 9-35 146-171 (376)
276 2o66_A PII protein; regulation 38.1 34 0.0011 20.3 3.1 28 7-34 79-109 (135)
277 2fhp_A Methylase, putative; al 38.0 9.9 0.00034 22.6 0.8 21 13-34 133-155 (187)
278 1ny8_A Protein YRBA; structure 37.4 24 0.00083 19.9 2.3 18 64-81 73-90 (97)
279 2fi0_A Conserved domain protei 37.1 26 0.00087 18.8 2.3 18 66-83 61-78 (81)
280 1boo_A Protein (N-4 cytosine-s 37.0 19 0.00064 24.3 2.1 22 10-32 62-83 (323)
281 3q7e_A Protein arginine N-meth 36.6 15 0.00051 25.0 1.6 22 9-31 150-171 (349)
282 3lap_A Arginine repressor; arg 36.3 18 0.00063 22.5 1.8 23 62-84 31-53 (170)
283 3fzg_A 16S rRNA methylase; met 35.0 4.2 0.00015 26.2 -1.3 30 1-33 123-152 (200)
284 3t7v_A Methylornithine synthas 35.0 19 0.00066 24.3 1.9 20 65-84 321-340 (350)
285 3c0k_A UPF0064 protein YCCW; P 35.0 21 0.00071 24.7 2.1 24 9-33 316-339 (396)
286 1r18_A Protein-L-isoaspartate( 34.9 11 0.00037 23.6 0.6 19 14-33 176-194 (227)
287 2j9c_A GLNK1, hypothetical nit 33.7 41 0.0014 19.3 3.0 28 7-34 68-98 (119)
288 3cxj_A Uncharacterized protein 33.4 20 0.0007 22.3 1.7 20 67-86 4-23 (165)
289 2f8l_A Hypothetical protein LM 33.3 18 0.00061 24.4 1.5 21 12-33 236-256 (344)
290 1x8d_A Hypothetical protein YI 32.8 69 0.0024 18.1 4.1 30 68-97 26-58 (104)
291 1b33_N Phycobilisome 7.8 KD li 32.7 46 0.0016 17.5 2.7 58 27-90 1-58 (67)
292 2b78_A Hypothetical protein SM 32.5 23 0.0008 24.5 2.0 22 11-33 310-331 (385)
293 2b49_A Protein tyrosine phosph 31.6 58 0.002 21.6 3.8 29 4-33 181-216 (287)
294 2gmg_A Hypothetical protein PF 30.5 50 0.0017 19.0 2.8 28 7-34 40-68 (105)
295 2yx1_A Hypothetical protein MJ 30.3 17 0.00058 24.6 1.0 26 11-37 270-295 (336)
296 1yg0_A COP associated protein; 30.2 34 0.0012 15.9 2.0 17 67-83 50-66 (66)
297 3rhf_A Putative polyphosphate 29.1 29 0.001 23.5 2.0 67 12-86 119-185 (289)
298 1g60_A Adenine-specific methyl 29.1 31 0.0011 22.3 2.1 22 10-32 52-73 (260)
299 2okc_A Type I restriction enzy 28.9 24 0.00082 24.8 1.6 21 12-33 287-307 (445)
300 4a2a_A Cell division protein F 28.8 63 0.0021 22.7 3.8 80 5-87 105-189 (419)
301 4fpp_A Phosphotransferase; fou 28.8 47 0.0016 21.1 2.9 21 11-32 151-171 (247)
302 3o4f_A Spermidine synthase; am 28.6 20 0.00068 24.3 1.1 20 12-32 178-197 (294)
303 3qr3_A Endoglucanase EG-II; TI 28.1 35 0.0012 23.3 2.3 25 62-86 39-63 (340)
304 3ny7_A YCHM protein, sulfate t 28.0 80 0.0027 17.6 3.6 25 8-33 60-84 (118)
305 2z51_A NIFU-like protein 2, ch 27.6 74 0.0025 19.4 3.5 30 5-34 3-32 (154)
306 3v4g_A Arginine repressor; vib 27.5 29 0.001 21.9 1.6 21 62-82 44-64 (180)
307 1cqm_A Ribosomal protein S6; a 27.1 86 0.0029 17.4 3.7 30 5-34 13-42 (101)
308 1f6v_A DNA transposition prote 27.1 11 0.00037 21.2 -0.4 18 7-27 28-45 (91)
309 3lec_A NADB-rossmann superfami 27.0 76 0.0026 20.5 3.7 33 66-98 127-162 (230)
310 3beg_B Splicing factor, argini 27.0 85 0.0029 17.3 3.8 32 65-97 27-58 (115)
311 1wwu_A Hypothetical protein FL 26.9 39 0.0014 19.2 2.0 25 65-89 23-47 (99)
312 1b4a_A Arginine repressor; hel 26.7 34 0.0012 20.7 1.8 22 62-83 16-37 (149)
313 2bh1_A General secretion pathw 26.6 68 0.0023 21.0 3.4 21 68-88 118-138 (250)
314 2ih2_A Modification methylase 26.5 28 0.00096 23.8 1.6 20 13-33 145-164 (421)
315 2cc0_A Acetyl-xylan esterase; 26.4 32 0.0011 21.2 1.7 57 4-88 129-185 (195)
316 3itq_A Prolyl 4-hydroxylase, a 25.9 53 0.0018 21.0 2.7 23 2-25 43-66 (216)
317 1xhj_A Nitrogen fixation prote 25.7 48 0.0016 18.3 2.2 26 9-34 10-35 (88)
318 1x4c_A Splicing factor, argini 25.6 87 0.003 16.9 4.8 33 64-97 25-57 (108)
319 2d8c_A Phosphatidylcholine:cer 25.5 29 0.00098 19.5 1.2 21 62-82 16-36 (97)
320 3v97_A Ribosomal RNA large sub 25.4 36 0.0012 25.7 2.1 23 9-32 634-656 (703)
321 2c1i_A Peptidoglycan glcnac de 24.9 21 0.0007 25.5 0.7 28 5-33 359-386 (431)
322 2pww_A Uncharacterized protein 24.8 33 0.0011 20.4 1.4 21 62-82 11-31 (127)
323 2j5a_A 30S ribosomal protein S 24.5 1E+02 0.0034 17.4 3.5 30 5-34 19-48 (110)
324 4dgh_A Sulfate permease family 23.8 87 0.003 17.6 3.2 26 8-33 63-88 (130)
325 2qif_A Copper chaperone COPZ; 23.6 51 0.0017 15.2 1.9 18 66-83 51-68 (69)
326 1eg2_A Modification methylase 23.5 44 0.0015 22.6 2.1 22 10-32 84-105 (319)
327 1jl0_A Adometdc, S-adenosylmet 23.4 1.1E+02 0.0038 21.2 4.1 27 63-89 32-58 (334)
328 3mf7_A CIS-3-chloroacrylic aci 23.3 1.1E+02 0.0039 18.2 3.8 69 5-77 11-84 (149)
329 2ooq_A Receptor-type tyrosine- 23.3 1.1E+02 0.0038 20.1 4.0 30 4-33 183-219 (286)
330 2f3n_A SH3 and multiple ankyri 23.1 58 0.002 16.9 2.2 18 65-82 4-21 (76)
331 3s3e_A Tyrosine-protein phosph 22.0 1.1E+02 0.0039 20.4 3.9 29 4-32 206-241 (307)
332 3evf_A RNA-directed RNA polyme 22.0 49 0.0017 22.3 2.0 24 11-36 162-186 (277)
333 2jvf_A De novo protein M7; tet 21.7 54 0.0019 17.6 1.8 23 64-86 31-53 (96)
334 3k6r_A Putative transferase PH 21.6 27 0.00091 23.3 0.7 49 11-83 204-252 (278)
335 4h62_V Mediator of RNA polymer 21.5 62 0.0021 13.8 2.3 18 5-22 8-25 (31)
336 3gge_A PDZ domain-containing p 21.5 47 0.0016 18.5 1.6 15 3-17 61-75 (95)
337 2e8m_A Epidermal growth factor 21.4 33 0.0011 19.5 0.9 24 65-88 33-56 (99)
338 2gol_A Matrix protein P17 (MA) 21.3 84 0.0029 18.8 2.7 20 7-27 54-73 (133)
339 1ny1_A Probable polysaccharide 21.3 51 0.0017 21.1 2.0 29 4-33 169-200 (240)
340 3r3t_A 30S ribosomal protein S 21.2 68 0.0023 17.8 2.3 30 5-34 16-45 (99)
341 2img_A Dual specificity protei 21.2 1E+02 0.0035 17.4 3.2 24 9-33 73-96 (151)
342 4ed9_A CAIB/BAIF family protei 21.1 55 0.0019 22.9 2.2 23 64-86 303-325 (385)
343 3fpn_A Geobacillus stearotherm 21.1 74 0.0025 18.5 2.5 47 12-85 7-53 (119)
344 3c6k_A Spermine synthase; sper 20.9 37 0.0013 23.9 1.3 21 11-32 310-330 (381)
345 4as2_A Phosphorylcholine phosp 20.9 1.1E+02 0.0037 20.8 3.6 30 3-34 3-32 (327)
346 1cc8_A Protein (metallochapero 20.9 88 0.003 15.2 3.3 20 66-85 51-70 (73)
347 3czp_A Putative polyphosphate 20.8 1.2E+02 0.0041 22.0 4.0 61 14-86 89-153 (500)
348 2kuf_A PKNB, serine/threonine- 20.8 85 0.0029 18.1 2.8 24 62-85 78-101 (139)
349 4erc_A Dual specificity protei 20.7 1.1E+02 0.0036 17.4 3.2 24 9-33 72-95 (150)
350 2rhq_B Phenylalanyl-tRNA synth 20.5 1.9E+02 0.0066 22.3 5.2 25 66-90 16-40 (795)
351 3bq7_A Diacylglycerol kinase d 20.4 71 0.0024 16.8 2.2 20 63-82 7-26 (81)
352 3lvj_C Sulfurtransferase TUSA; 20.3 1.1E+02 0.0037 16.1 3.3 25 68-92 50-74 (82)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.96 E-value=2.1e-28 Score=171.11 Aligned_cols=94 Identities=27% Similarity=0.438 Sum_probs=86.8
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+|||||+|++|++||++|+++| +|||+|+|+|.++++++..+. ....+|+.||+.+ +|++||.+||++||++|||
T Consensus 252 ~vlh~~~d~~~~~iL~~~~~al-~pgg~lli~e~~~~~~~~~~~---~~~~~dl~ml~~~-~g~ert~~e~~~ll~~AGf 326 (353)
T 4a6d_A 252 RVLHDWADGKCSHLLERIYHTC-KPGGGILVIESLLDEDRRGPL---LTQLYSLNMLVQT-EGQERTPTHYHMLLSSAGF 326 (353)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHC-CTTCEEEEEECCCCTTSCCCH---HHHHHHHHHHHSS-SCCCCCHHHHHHHHHHHTC
T ss_pred eecccCCHHHHHHHHHHHHhhC-CCCCEEEEEEeeeCCCCCCCH---HHHHHHHHHHHhC-CCcCCCHHHHHHHHHHCCC
Confidence 6899999999999999999999 999999999999987765442 4467899999987 9999999999999999999
Q ss_pred CeeEEEEcCCCeeEEEEEC
Q 037161 81 SGIRFQCFVCNSWVMEFYK 99 (99)
Q Consensus 81 ~~~~~~~~~~~~~vie~~k 99 (99)
++++++++++..++|+|+|
T Consensus 327 ~~v~v~~~~~~~~~i~ArK 345 (353)
T 4a6d_A 327 RDFQFKKTGAIYDAILARK 345 (353)
T ss_dssp EEEEEECCSSSCEEEEEEC
T ss_pred ceEEEEEcCCceEEEEEEe
Confidence 9999999999999999998
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.90 E-value=2.1e-23 Score=146.35 Aligned_cols=98 Identities=43% Similarity=0.873 Sum_probs=85.9
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+|||+|+|+++.++|++++++| +|||+|+|+|.+.++.............+|+.|+....+|++||.+||.++|++|||
T Consensus 267 ~vlh~~~d~~~~~~L~~~~~~L-~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF 345 (364)
T 3p9c_A 267 WILHDWSDQHCATLLKNCYDAL-PAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGF 345 (364)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHS-CTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTC
T ss_pred HHhccCCHHHHHHHHHHHHHHc-CCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCC
Confidence 5899999999999999999999 999999999999987654432333446789999854349999999999999999999
Q ss_pred CeeEEEEcCCCeeEEEEEC
Q 037161 81 SGIRFQCFVCNSWVMEFYK 99 (99)
Q Consensus 81 ~~~~~~~~~~~~~vie~~k 99 (99)
+.+++.++.+..++||++|
T Consensus 346 ~~v~~~~~~~~~~vie~~k 364 (364)
T 3p9c_A 346 TGVKSTYIYANAWAIEFTK 364 (364)
T ss_dssp CEEEEEEEETTEEEEEEEC
T ss_pred ceEEEEEcCCceEEEEEeC
Confidence 9999999999999999997
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.89 E-value=1.5e-22 Score=142.04 Aligned_cols=98 Identities=49% Similarity=0.847 Sum_probs=86.2
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+|||+|+|+++.++|++++++| +|||+|+|+|.+.++....+........+|+.|+..+.+|++||.+||+++|++|||
T Consensus 269 ~vlh~~~~~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF 347 (368)
T 3reo_A 269 WICHDWSDEHCLKLLKNCYAAL-PDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGF 347 (368)
T ss_dssp SCGGGBCHHHHHHHHHHHHHHS-CTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTC
T ss_pred chhhcCCHHHHHHHHHHHHHHc-CCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCC
Confidence 5899999999999999999999 999999999999887654433333456789999875448999999999999999999
Q ss_pred CeeEEEEcCCCeeEEEEEC
Q 037161 81 SGIRFQCFVCNSWVMEFYK 99 (99)
Q Consensus 81 ~~~~~~~~~~~~~vie~~k 99 (99)
+++++.+..+..++||++|
T Consensus 348 ~~v~~~~~~~~~~vie~~k 366 (368)
T 3reo_A 348 RGFKVASCAFNTYVMEFLK 366 (368)
T ss_dssp CEEEEEEEETTEEEEEEEC
T ss_pred eeeEEEEeCCCcEEEEEEe
Confidence 9999999999999999987
No 4
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.84 E-value=1.6e-20 Score=130.65 Aligned_cols=93 Identities=30% Similarity=0.466 Sum_probs=83.3
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
++||+|+|+++.++|++++++| +|||+++|.|.+.++...+. ....+|+.|+... +|++||.+||.++|++|||
T Consensus 255 ~vlh~~~d~~~~~~L~~~~~~L-kpgG~l~i~e~~~~~~~~~~----~~~~~d~~~~~~~-~~~~~t~~e~~~ll~~aGf 328 (348)
T 3lst_A 255 RILHNWGDEDSVRILTNCRRVM-PAHGRVLVIDAVVPEGNDAH----QSKEMDFMMLAAR-TGQERTAAELEPLFTAAGL 328 (348)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTC-CTTCEEEEEECCBCSSSSCC----HHHHHHHHHHHTT-SCCCCBHHHHHHHHHHTTE
T ss_pred hhccCCCHHHHHHHHHHHHHhc-CCCCEEEEEEeccCCCCCcc----hhhhcChhhhhcC-CCcCCCHHHHHHHHHHCCC
Confidence 5899999999999999999999 99999999999888764332 3457899998875 9999999999999999999
Q ss_pred CeeEEEEcCCCeeEEEEEC
Q 037161 81 SGIRFQCFVCNSWVMEFYK 99 (99)
Q Consensus 81 ~~~~~~~~~~~~~vie~~k 99 (99)
+++++.+..+..++||++|
T Consensus 329 ~~~~~~~~~~~~~vie~~p 347 (348)
T 3lst_A 329 RLDRVVGTSSVMSIAVGVP 347 (348)
T ss_dssp EEEEEEECSSSCEEEEEEE
T ss_pred ceEEEEECCCCcEEEEEEe
Confidence 9999999878899999986
No 5
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.83 E-value=1e-20 Score=132.63 Aligned_cols=92 Identities=24% Similarity=0.452 Sum_probs=82.8
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+|||+|+|+++.++|++++++| +|||+++|.|.+.++...+. ...+|+.|+... +|++||.+||.++|++|||
T Consensus 276 ~vlh~~~d~~~~~~L~~~~~~L-~pgG~l~i~e~~~~~~~~~~-----~~~~d~~~~~~~-~g~~~t~~e~~~ll~~aGf 348 (369)
T 3gwz_A 276 HVLHDWDDDDVVRILRRIATAM-KPDSRLLVIDNLIDERPAAS-----TLFVDLLLLVLV-GGAERSESEFAALLEKSGL 348 (369)
T ss_dssp SCGGGSCHHHHHHHHHHHHTTC-CTTCEEEEEEEBCCSSCCHH-----HHHHHHHHHHHH-SCCCBCHHHHHHHHHTTTE
T ss_pred hhhccCCHHHHHHHHHHHHHHc-CCCCEEEEEEeccCCCCCCc-----hhHhhHHHHhhc-CCccCCHHHHHHHHHHCCC
Confidence 5899999999999999999999 99999999999988764321 457899998875 9999999999999999999
Q ss_pred CeeEEEE-cCCCeeEEEEEC
Q 037161 81 SGIRFQC-FVCNSWVMEFYK 99 (99)
Q Consensus 81 ~~~~~~~-~~~~~~vie~~k 99 (99)
+++++.+ ..+..++||++|
T Consensus 349 ~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 349 RVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp EEEEEEECSSSSEEEEEEEE
T ss_pred eEEEEEECCCCCcEEEEEEe
Confidence 9999999 678899999986
No 6
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.83 E-value=2.2e-20 Score=130.28 Aligned_cols=97 Identities=35% Similarity=0.554 Sum_probs=84.1
Q ss_pred CccccCChHHHHHHHHHHHHhccCC---CceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHH
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKE---DGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATA 77 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~p---gg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~ 77 (99)
++||+|+|+++.++|++++++| +| ||+++|.|.+.++....+........+|+.|+... +|++||.+||.++|++
T Consensus 259 ~vlh~~~d~~~~~~l~~~~~~L-~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~-~g~~~t~~e~~~ll~~ 336 (358)
T 1zg3_A 259 WVLHDWNDEQSLKILKNSKEAI-SHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMF-LGKERTKQEWEKLIYD 336 (358)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHT-GGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHH-SCCCEEHHHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccC-CCCCCCHHHHHHHHHH
Confidence 5899999999999999999999 99 99999999998876443211124567899888765 8999999999999999
Q ss_pred cCCCeeEEEEcCCCeeEEEEEC
Q 037161 78 AGFSGIRFQCFVCNSWVMEFYK 99 (99)
Q Consensus 78 aGf~~~~~~~~~~~~~vie~~k 99 (99)
|||+++++.+.++..++||++|
T Consensus 337 aGf~~~~~~~~~~~~~vie~~~ 358 (358)
T 1zg3_A 337 AGFSSYKITPISGFKSLIEVYP 358 (358)
T ss_dssp TTCCEEEEEEETTTEEEEEEEC
T ss_pred cCCCeeEEEecCCCcEEEEEeC
Confidence 9999999999888899999987
No 7
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.83 E-value=1.9e-20 Score=129.27 Aligned_cols=89 Identities=28% Similarity=0.424 Sum_probs=79.1
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+|||+|+|+++.++|++++++| +|||+++|.|.+.++. .+ ...+|+.|+... +|++||.+||.++|++|||
T Consensus 243 ~vlh~~~~~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~-~~------~~~~d~~~~~~~-~~~~~t~~e~~~ll~~aGf 313 (332)
T 3i53_A 243 AVLHDWDDLSAVAILRRCAEAA-GSGGVVLVIEAVAGDE-HA------GTGMDLRMLTYF-GGKERSLAELGELAAQAGL 313 (332)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHH-TTTCEEEEEECCCC----C------CHHHHHHHHHHH-SCCCCCHHHHHHHHHHTTE
T ss_pred hhhccCCHHHHHHHHHHHHHhc-CCCCEEEEEeecCCCC-Cc------cHHHHHHHHhhC-CCCCCCHHHHHHHHHHCCC
Confidence 5899999999999999999999 9999999999988765 22 246888888875 9999999999999999999
Q ss_pred CeeEEEEcCCCeeEEEEEC
Q 037161 81 SGIRFQCFVCNSWVMEFYK 99 (99)
Q Consensus 81 ~~~~~~~~~~~~~vie~~k 99 (99)
+++++.+.++ .++||++|
T Consensus 314 ~~~~~~~~~~-~~vie~r~ 331 (332)
T 3i53_A 314 AVRAAHPISY-VSIVEMTA 331 (332)
T ss_dssp EEEEEEECSS-SEEEEEEE
T ss_pred EEEEEEECCC-cEEEEEee
Confidence 9999999988 99999985
No 8
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.82 E-value=5.8e-20 Score=126.70 Aligned_cols=93 Identities=23% Similarity=0.399 Sum_probs=82.8
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+++|+|+|+++.++|++++++| +|||+++|.|.+.++...+ .....+|+.|+... +|++||.+||.+++++|||
T Consensus 241 ~vl~~~~~~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~t~~e~~~ll~~aGf 314 (334)
T 2ip2_A 241 RIIGDLDEAASLRLLGNCREAM-AGDGRVVVIERTISASEPS----PMSVLWDVHLFMAC-AGRHRTTEEVVDLLGRGGF 314 (334)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHS-CTTCEEEEEECCBCSSSCC----HHHHHHHHHHHHHH-SCCCCBHHHHHHHHHHTTE
T ss_pred hhccCCCHHHHHHHHHHHHHhc-CCCCEEEEEEeccCCCCCc----chhHHhhhHhHhhC-CCcCCCHHHHHHHHHHCCC
Confidence 5899999999999999999999 9999999999988765432 23467888888765 8999999999999999999
Q ss_pred CeeEEEEcCCCeeEEEEEC
Q 037161 81 SGIRFQCFVCNSWVMEFYK 99 (99)
Q Consensus 81 ~~~~~~~~~~~~~vie~~k 99 (99)
+++++.+.++..++||++|
T Consensus 315 ~~~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 315 AVERIVDLPMETRMIVAAR 333 (334)
T ss_dssp EEEEEEEETTTEEEEEEEE
T ss_pred ceeEEEECCCCCEEEEEEe
Confidence 9999999988899999986
No 9
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.81 E-value=2e-19 Score=125.13 Aligned_cols=96 Identities=28% Similarity=0.556 Sum_probs=82.3
Q ss_pred CccccCChHHHHHHHHHHHHhccCC---CceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHH
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKE---DGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATA 77 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~p---gg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~ 77 (99)
++||+|+|+++.++|++++++| +| ||+++|.|.+.++....+........+|+.|+. . +|++||.+||.++|++
T Consensus 254 ~~lh~~~d~~~~~~l~~~~~~L-~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~-~g~~~t~~e~~~ll~~ 330 (352)
T 1fp2_A 254 YILHNWTDKDCLRILKKCKEAV-TNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC-L-NGKERNEEEWKKLFIE 330 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHH-SGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGG-G-TCCCEEHHHHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHh-c-cCCCCCHHHHHHHHHH
Confidence 5899999999999999999999 99 999999999988654321111234578888887 4 6999999999999999
Q ss_pred cCCCeeEEEEcCCCeeEEEEEC
Q 037161 78 AGFSGIRFQCFVCNSWVMEFYK 99 (99)
Q Consensus 78 aGf~~~~~~~~~~~~~vie~~k 99 (99)
|||+.+++.+.++..++||++|
T Consensus 331 aGf~~~~~~~~~~~~~vie~~~ 352 (352)
T 1fp2_A 331 AGFQHYKISPLTGFLSLIEIYP 352 (352)
T ss_dssp TTCCEEEEEEEETTEEEEEEEC
T ss_pred CCCCeeEEEecCCCcEEEEEeC
Confidence 9999999999888889999987
No 10
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.80 E-value=1.3e-19 Score=126.95 Aligned_cols=97 Identities=39% Similarity=0.737 Sum_probs=81.5
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
++||+|+|+++.++|++++++| +|||+++|.|.+.++....+...+....+|+.|+... +|++||.+||.++|++|||
T Consensus 275 ~~lh~~~d~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~t~~e~~~ll~~aGf 352 (372)
T 1fp1_D 275 AVCHNWSDEKCIEFLSNCHKAL-SPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITV-GGRERTEKQYEKLSKLSGF 352 (372)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHH-SCCCEEHHHHHHHHHHTTC
T ss_pred cccccCCHHHHHHHHHHHHHhc-CCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhcc-CCccCCHHHHHHHHHHCCC
Confidence 5899999999999999999999 9999999999998876543222223467888888754 7999999999999999999
Q ss_pred CeeEEEEc-CCCeeEEEEEC
Q 037161 81 SGIRFQCF-VCNSWVMEFYK 99 (99)
Q Consensus 81 ~~~~~~~~-~~~~~vie~~k 99 (99)
+++++.+. .+..++||++|
T Consensus 353 ~~~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 353 SKFQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp SEEEEEEEETTTEEEEEEEC
T ss_pred ceEEEEEcCCCCeEEEEEeC
Confidence 99999984 44369999987
No 11
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.76 E-value=2.9e-18 Score=118.89 Aligned_cols=93 Identities=10% Similarity=0.179 Sum_probs=79.6
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
++||+|+|+++.++|++++++| +|||+++|.|.+.++....+ .....+|+.|+..+.+|++||.+||.++|++|||
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 331 (352)
T 3mcz_A 256 DCLHYFDAREAREVIGHAAGLV-KPGGALLILTMTMNDDRVTP---ALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGL 331 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTE-EEEEEEEEEEECCCTTSSSS---HHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTC
T ss_pred cccccCCHHHHHHHHHHHHHHc-CCCCEEEEEEeccCCCCCCC---chHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCC
Confidence 5899999999999999999999 99999999999988765433 2346789998876558999999999999999999
Q ss_pred CeeEEEEcCCCeeEEEEEC
Q 037161 81 SGIRFQCFVCNSWVMEFYK 99 (99)
Q Consensus 81 ~~~~~~~~~~~~~vie~~k 99 (99)
++++.. .+..+++.++|
T Consensus 332 ~~~~~~--~g~~~l~~a~k 348 (352)
T 3mcz_A 332 AVGERS--IGRYTLLIGQR 348 (352)
T ss_dssp EEEEEE--ETTEEEEEEEC
T ss_pred ceeeec--cCceEEEEEec
Confidence 999843 35688888876
No 12
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.76 E-value=1.3e-18 Score=121.67 Aligned_cols=97 Identities=15% Similarity=0.223 Sum_probs=77.3
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCch-hhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSA-TSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAG 79 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~-~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aG 79 (99)
++||+|+|+++.++|++++++| +|||+|+|.|.+.++...... ........++.|+... ++++||.+||.++|++||
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~t~~e~~~ll~~AG 333 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSI-GKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANG-NSKMFHSDDLIRCIENAG 333 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHC-CTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCS-SCCSCCHHHHHHHHHTTT
T ss_pred chhhhCCHHHHHHHHHHHHHhc-CCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCC-CCcccCHHHHHHHHHHcC
Confidence 5899999999999999999999 999999999998886543211 0011133455556554 789999999999999999
Q ss_pred CCeeEEEEcC-CCeeEEEEEC
Q 037161 80 FSGIRFQCFV-CNSWVMEFYK 99 (99)
Q Consensus 80 f~~~~~~~~~-~~~~vie~~k 99 (99)
|+++++.+.. ...++||+.|
T Consensus 334 f~~v~~~~~~g~~~svi~~~~ 354 (363)
T 3dp7_A 334 LEVEEIQDNIGLGHSILQCRL 354 (363)
T ss_dssp EEESCCCCCBTTTBEEEEEEE
T ss_pred CeEEEEEeCCCCCceEEEEee
Confidence 9999998764 4689999875
No 13
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.72 E-value=6.6e-18 Score=117.41 Aligned_cols=93 Identities=23% Similarity=0.397 Sum_probs=80.3
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeee-cCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAV-LPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAG 79 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~-~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aG 79 (99)
+++|+|+|+++.++|++++++| +|||+++|.|.+ .++..... ....+|+.|+... +|+.||.++|.++|++||
T Consensus 257 ~vl~~~~~~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~t~~e~~~ll~~aG 330 (360)
T 1tw3_A 257 FVLLNWPDHDAVRILTRCAEAL-EPGGRILIHERDDLHENSFNE----QFTELDLRMLVFL-GGALRTREKWDGLAASAG 330 (360)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTE-EEEEEEEEEECCBCGGGCCSH----HHHHHHHHHHHHH-SCCCCBHHHHHHHHHHTT
T ss_pred ccccCCCHHHHHHHHHHHHHhc-CCCcEEEEEEEeccCCCCCcc----hhhhccHHHhhhc-CCcCCCHHHHHHHHHHCC
Confidence 5899999999999999999999 999999999998 76543322 3356788887765 899999999999999999
Q ss_pred CCeeEEEEcCCC-----eeEEEEEC
Q 037161 80 FSGIRFQCFVCN-----SWVMEFYK 99 (99)
Q Consensus 80 f~~~~~~~~~~~-----~~vie~~k 99 (99)
|+++++.+.++. .++||++|
T Consensus 331 f~~~~~~~~~~~~~~~~~~~i~~~~ 355 (360)
T 1tw3_A 331 LVVEEVRQLPSPTIPYDLSLLVLAP 355 (360)
T ss_dssp EEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred CeEEEEEeCCCCcccCccEEEEEEe
Confidence 999999988765 89999986
No 14
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.71 E-value=3.9e-17 Score=112.25 Aligned_cols=94 Identities=20% Similarity=0.334 Sum_probs=81.0
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+++|+|+++++.++|++++++| +|||+++|.|...++....+ .....+|+.|+....+++.||.++|.++++++||
T Consensus 240 ~~l~~~~~~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf 315 (335)
T 2r3s_A 240 NFLHHFDVATCEQLLRKIKTAL-AVEGKVIVFDFIPNSDRITP---PDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGF 315 (335)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEECCCCTTSSCS---HHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTC
T ss_pred chhccCCHHHHHHHHHHHHHhC-CCCcEEEEEeecCCCCcCCc---hHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCC
Confidence 5899999999999999999999 99999999999887654332 2346788888876558999999999999999999
Q ss_pred CeeEEEEcCCCeeEEEEE
Q 037161 81 SGIRFQCFVCNSWVMEFY 98 (99)
Q Consensus 81 ~~~~~~~~~~~~~vie~~ 98 (99)
+.+++.++.+..++|+++
T Consensus 316 ~~~~~~~~~~~~~~i~~~ 333 (335)
T 2r3s_A 316 SHSQLHSLPTTQQQVIVA 333 (335)
T ss_dssp SEEEEECCTTSSSEEEEE
T ss_pred CeeeEEECCCCceeEEEe
Confidence 999999988888888875
No 15
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.70 E-value=1.7e-17 Score=115.73 Aligned_cols=93 Identities=29% Similarity=0.502 Sum_probs=76.8
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEee--ecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHc
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEA--VLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAA 78 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~--~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~a 78 (99)
+++|+|+|+++.++|++++++| +|||+++|.|. +.++.... .....+|+.|+... +|+.||.++|.++|+++
T Consensus 256 ~vl~~~~~~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~a 329 (374)
T 1qzz_A 256 FVLLNWSDEDALTILRGCVRAL-EPGGRLLVLDRADVEGDGADR----FFSTLLDLRMLTFM-GGRVRTRDEVVDLAGSA 329 (374)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEECCH-------H----HHHHHHHHHHHHHH-SCCCCCHHHHHHHHHTT
T ss_pred ccccCCCHHHHHHHHHHHHHhc-CCCcEEEEEechhhcCCCCCc----chhhhcchHHHHhC-CCcCCCHHHHHHHHHHC
Confidence 5899999999999999999999 99999999999 87654321 23457788888765 89999999999999999
Q ss_pred CCCeeEEEEcCCCe-----eEEEEEC
Q 037161 79 GFSGIRFQCFVCNS-----WVMEFYK 99 (99)
Q Consensus 79 Gf~~~~~~~~~~~~-----~vie~~k 99 (99)
||+++++.+.++.. ++||++|
T Consensus 330 Gf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (374)
T 1qzz_A 330 GLALASERTSGSTTLPFDFSILEFTA 355 (374)
T ss_dssp TEEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred CCceEEEEECCCCcccCCcEEEEEEE
Confidence 99999999988777 9999975
No 16
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.68 E-value=2e-16 Score=110.16 Aligned_cols=91 Identities=9% Similarity=0.231 Sum_probs=75.2
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCcee----cCHHHHHHHHH
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKV----RTKHEFINLAT 76 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~----rt~~e~~~ll~ 76 (99)
+++|+|+|+++.++|++++++| +|||+++|.|.+.++...+. ....+ .|+....+|++ ||.+||.++|+
T Consensus 264 ~vlh~~~d~~~~~~l~~~~~~L-~pgG~l~i~e~~~~~~~~~~----~~~~~--~~~~~~~~g~~~~~~~t~~e~~~ll~ 336 (359)
T 1x19_A 264 RILYSANEQLSTIMCKKAFDAM-RSGGRLLILDMVIDDPENPN----FDYLS--HYILGAGMPFSVLGFKEQARYKEILE 336 (359)
T ss_dssp SCGGGSCHHHHHHHHHHHHTTC-CTTCEEEEEEECCCCTTSCC----HHHHH--HHGGGGGSSCCCCCCCCGGGHHHHHH
T ss_pred chhccCCHHHHHHHHHHHHHhc-CCCCEEEEEecccCCCCCch----HHHHH--HHHHhcCCCCcccCCCCHHHHHHHHH
Confidence 5899999999999999999999 99999999999887652221 12233 44443335888 99999999999
Q ss_pred HcCCCeeEEEEcCCCeeEEEEEC
Q 037161 77 AAGFSGIRFQCFVCNSWVMEFYK 99 (99)
Q Consensus 77 ~aGf~~~~~~~~~~~~~vie~~k 99 (99)
+|||+++++.+.+ ..++|+++|
T Consensus 337 ~aGf~~v~~~~~~-~~~vi~a~k 358 (359)
T 1x19_A 337 SLGYKDVTMVRKY-DHLLVQAVK 358 (359)
T ss_dssp HHTCEEEEEEEET-TEEEEEEEC
T ss_pred HCCCceEEEEecC-CceEEEEeC
Confidence 9999999999987 889999987
No 17
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.05 E-value=5.7e-10 Score=72.81 Aligned_cols=96 Identities=22% Similarity=0.148 Sum_probs=66.7
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhh------------ch-HhhhcCCCceecC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQI------------DV-FMLTHSPRGKVRT 67 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~------------dl-~m~~~~~~g~~rt 67 (99)
+++|++++++..++|+++++.| +|||++++.+...++..... ......+ ++ ..+......+.+|
T Consensus 117 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (234)
T 3dtn_A 117 LSIHHLEDEDKKELYKRSYSIL-KESGIFINADLVHGETAFIE--NLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIE 193 (234)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEECBCSSHHHH--HHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCB
T ss_pred CccccCCHHHHHHHHHHHHHhc-CCCcEEEEEEecCCCChhhh--hHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccC
Confidence 4789999999999999999999 99999999998776542110 0000000 00 0000112456789
Q ss_pred HHHHHHHHHHcCCCeeEEEEcCCCeeEEEEEC
Q 037161 68 KHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99 (99)
Q Consensus 68 ~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~k 99 (99)
.++|.++|++|||+.+++.......+++-.+|
T Consensus 194 ~~~~~~ll~~aGF~~v~~~~~~~~~~~~~~~~ 225 (234)
T 3dtn_A 194 MNQQLNWLKEAGFRDVSCIYKYYQFAVMFGRK 225 (234)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEETTEEEEEEEC
T ss_pred HHHHHHHHHHcCCCceeeeeeecceeEEEEEe
Confidence 99999999999999999987766777766543
No 18
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.98 E-value=2.5e-09 Score=71.90 Aligned_cols=95 Identities=15% Similarity=0.035 Sum_probs=62.1
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhh-hhhchHhhh-------------cCCCceecC
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKAN-SQIDVFMLT-------------HSPRGKVRT 67 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~-~~~dl~m~~-------------~~~~g~~rt 67 (99)
+||..++++..++|++++++| +|||++++.|...++.+... .... ...++.... ...--..+|
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~L-kpGG~lii~e~~~~~~~~~~--~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s 224 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGL-NPGGALVLSEKFSFEDAKVG--ELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDS 224 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEEBCCSSHHHH--HHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBC
T ss_pred eeeecCchhHhHHHHHHHHHc-CCCcEEEEEeccCCCCHHHH--HHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCC
Confidence 689999999999999999999 99999999998876542110 0000 000110000 000013578
Q ss_pred HHHHHHHHHHcCCCeeEEEEcCCCeeEEEEEC
Q 037161 68 KHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99 (99)
Q Consensus 68 ~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~k 99 (99)
.+++.++|++|||+.++++--.-.+..+-|+|
T Consensus 225 ~~~~~~~L~~AGF~~ve~~fq~~nF~~~iA~K 256 (261)
T 4gek_A 225 VETHKARLHKAGFEHSELWFQCFNFGSLVALK 256 (261)
T ss_dssp HHHHHHHHHHHTCSEEEEEEEETTEEEEEEEC
T ss_pred HHHHHHHHHHcCCCeEEEEEEeccEEEEEEEE
Confidence 99999999999999998863323444455665
No 19
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.83 E-value=2.2e-08 Score=64.60 Aligned_cols=94 Identities=14% Similarity=0.174 Sum_probs=60.9
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhh---chHhhhc-CCCceecCHHHHHHHHH
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQI---DVFMLTH-SPRGKVRTKHEFINLAT 76 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~---dl~m~~~-~~~g~~rt~~e~~~ll~ 76 (99)
+++|++++.+..++|+++++.| +|||++++.+...+..... ....... ....... .......|.++|.++|+
T Consensus 114 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 189 (220)
T 3hnr_A 114 YAFHHLTDDEKNVAIAKYSQLL-NKGGKIVFADTIFADQDAY---DKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFE 189 (220)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHS-CTTCEEEEEEECBSSHHHH---HHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHH
T ss_pred cchhcCChHHHHHHHHHHHHhc-CCCCEEEEEeccccChHHH---HHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHH
Confidence 4789999999889999999999 9999999998765432110 0000000 0000000 00113448899999999
Q ss_pred HcCCCeeEEEEcCCCeeEEEEEC
Q 037161 77 AAGFSGIRFQCFVCNSWVMEFYK 99 (99)
Q Consensus 77 ~aGf~~~~~~~~~~~~~vie~~k 99 (99)
++||+++.+.. .....++++.|
T Consensus 190 ~aGf~v~~~~~-~~~~w~~~~~~ 211 (220)
T 3hnr_A 190 NNGFHVTFTRL-NHFVWVMEATK 211 (220)
T ss_dssp HTTEEEEEEEC-SSSEEEEEEEE
T ss_pred HCCCEEEEeec-cceEEEEeehh
Confidence 99998776544 46677777654
No 20
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.80 E-value=2.3e-09 Score=69.81 Aligned_cols=97 Identities=14% Similarity=0.087 Sum_probs=61.5
Q ss_pred ccccC-ChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhh--------------------hhhhhchHhhhcC
Q 037161 2 ILHAW-SDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSK--------------------ANSQIDVFMLTHS 60 (99)
Q Consensus 2 vlHdw-~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~--------------------~~~~~dl~m~~~~ 60 (99)
++|+. +.++..++|+++++.| +|||++++.+...++...+..... .....++.++...
T Consensus 110 ~~~~~~~~~~~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (239)
T 3bxo_A 110 SVGYLKTTEELGAAVASFAEHL-EPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVAD 188 (239)
T ss_dssp GGGGCCSHHHHHHHHHHHHHTE-EEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred hHhhcCCHHHHHHHHHHHHHhc-CCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEec
Confidence 56666 4478899999999999 999999997765543321100000 0001112222111
Q ss_pred CCc-----------eecCHHHHHHHHHHcCCCeeEEEEcCCCeeEEEEEC
Q 037161 61 PRG-----------KVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99 (99)
Q Consensus 61 ~~g-----------~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~k 99 (99)
.++ +.+|.++|.++|++|||+++.+....+...++.|+|
T Consensus 189 ~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K 238 (239)
T 3bxo_A 189 PGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVP 238 (239)
T ss_dssp TTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred CCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEec
Confidence 122 457999999999999997777655556778888876
No 21
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.75 E-value=6.9e-08 Score=62.16 Aligned_cols=79 Identities=18% Similarity=0.074 Sum_probs=60.7
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+++|+++| ...+|+++++.| +|||++++.+.......... .....++.++|.++++++||
T Consensus 114 ~~l~~~~~--~~~~l~~~~~~L-kpgG~l~i~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~~Gf 173 (219)
T 3dh0_A 114 FTFHELSE--PLKFLEELKRVA-KPFAYLAIIDWKKEERDKGP-----------------PPEEVYSEWEVGLILEDAGI 173 (219)
T ss_dssp SCGGGCSS--HHHHHHHHHHHE-EEEEEEEEEEECSSCCSSSC-----------------CGGGSCCHHHHHHHHHHTTC
T ss_pred hhhhhcCC--HHHHHHHHHHHh-CCCeEEEEEEecccccccCC-----------------chhcccCHHHHHHHHHHCCC
Confidence 36788876 578999999999 99999999987655432211 01234688999999999999
Q ss_pred CeeEEEEcCCCeeEEEEEC
Q 037161 81 SGIRFQCFVCNSWVMEFYK 99 (99)
Q Consensus 81 ~~~~~~~~~~~~~vie~~k 99 (99)
+++++.........+.++|
T Consensus 174 ~~~~~~~~~~~~~~~~~~k 192 (219)
T 3dh0_A 174 RVGRVVEVGKYCFGVYAMI 192 (219)
T ss_dssp EEEEEEEETTTEEEEEEEC
T ss_pred EEEEEEeeCCceEEEEEEe
Confidence 9999998877766666654
No 22
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.73 E-value=4.8e-09 Score=69.62 Aligned_cols=97 Identities=16% Similarity=0.097 Sum_probs=61.8
Q ss_pred ccccCCh-HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhh--------------------hhhhhhchHhhhcC
Q 037161 2 ILHAWSD-EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATS--------------------KANSQIDVFMLTHS 60 (99)
Q Consensus 2 vlHdw~d-~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~--------------------~~~~~~dl~m~~~~ 60 (99)
++|.+++ ++..++|+++++.| +|||+++|.+...++.-.+.... .....+++.++...
T Consensus 120 ~l~~~~~~~~~~~~l~~~~~~L-~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (263)
T 3pfg_A 120 SIGHLAGQAELDAALERFAAHV-LPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAG 198 (263)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTE-EEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHHHhc-CCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEec
Confidence 6777755 67889999999999 99999999654433321110000 00011122222111
Q ss_pred CC-----------ceecCHHHHHHHHHHcCCCeeEEEEcCCCeeEEEEEC
Q 037161 61 PR-----------GKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99 (99)
Q Consensus 61 ~~-----------g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~k 99 (99)
.+ .+.+|.+||.++|++|||+++++....+...++.++|
T Consensus 199 ~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K 248 (263)
T 3pfg_A 199 PDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLP 248 (263)
T ss_dssp TTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEE
T ss_pred CCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEec
Confidence 11 3456899999999999999999876666667777765
No 23
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.69 E-value=6.3e-08 Score=64.91 Aligned_cols=87 Identities=14% Similarity=0.157 Sum_probs=60.5
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCC-----CchhhhhhhhhchHhhhcCCCceecCHHHHHHHH
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPE-----NSATSKANSQIDVFMLTHSPRGKVRTKHEFINLA 75 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~-----~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll 75 (99)
.++|++++++..++|+++++.| +|||++++.+...+.... .+.........+...-....++...|.++|.+++
T Consensus 137 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l 215 (287)
T 1kpg_A 137 GAFEHFGHERYDAFFSLAHRLL-PADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECA 215 (287)
T ss_dssp SCGGGTCTTTHHHHHHHHHHHS-CTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHH
T ss_pred CchhhcChHHHHHHHHHHHHhc-CCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHH
Confidence 3688898888899999999999 999999999987654211 0000000011111111112367888999999999
Q ss_pred HHcCCCeeEEEEc
Q 037161 76 TAAGFSGIRFQCF 88 (99)
Q Consensus 76 ~~aGf~~~~~~~~ 88 (99)
+++||+++++...
T Consensus 216 ~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 216 SANGFTVTRVQSL 228 (287)
T ss_dssp HTTTCEEEEEEEC
T ss_pred HhCCcEEEEEEeC
Confidence 9999999998765
No 24
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.69 E-value=5.2e-08 Score=63.97 Aligned_cols=74 Identities=14% Similarity=0.183 Sum_probs=57.8
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+++|++++++..++|+++++.| +|||+++|.+........ ..+ .......||.++|.++|+++||
T Consensus 166 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~i~~~~~~~~~~---------~~~-----~~~~~~~~~~~~~~~~l~~aGf 230 (254)
T 1xtp_A 166 WTAIYLTDADFVKFFKHCQQAL-TPNGYIFFKENCSTGDRF---------LVD-----KEDSSLTRSDIHYKRLFNESGV 230 (254)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEEBC--CCE---------EEE-----TTTTEEEBCHHHHHHHHHHHTC
T ss_pred chhhhCCHHHHHHHHHHHHHhc-CCCeEEEEEecCCCcccc---------eec-----ccCCcccCCHHHHHHHHHHCCC
Confidence 4789999999999999999999 999999999975443210 111 1124567899999999999999
Q ss_pred CeeEEEEcC
Q 037161 81 SGIRFQCFV 89 (99)
Q Consensus 81 ~~~~~~~~~ 89 (99)
+++++....
T Consensus 231 ~~~~~~~~~ 239 (254)
T 1xtp_A 231 RVVKEAFQE 239 (254)
T ss_dssp CEEEEEECT
T ss_pred EEEEeeecC
Confidence 999987654
No 25
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.68 E-value=5.9e-08 Score=63.63 Aligned_cols=73 Identities=16% Similarity=0.275 Sum_probs=59.1
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+++|++++++..++|+++++.| +|||++++.+...+. .. .++- ..+...|+.++|.++|+++||
T Consensus 154 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~i~~~~~~~---~~-------~~~~-----~~~~~~~~~~~~~~~l~~aGf 217 (241)
T 2ex4_A 154 WVIGHLTDQHLAEFLRRCKGSL-RPNGIIVIKDNMAQE---GV-------ILDD-----VDSSVCRDLDVVRRIICSAGL 217 (241)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEEEBSS---SE-------EEET-----TTTEEEEBHHHHHHHHHHTTC
T ss_pred chhhhCCHHHHHHHHHHHHHhc-CCCeEEEEEEccCCC---cc-------eecc-----cCCcccCCHHHHHHHHHHcCC
Confidence 3689999998999999999999 999999999987664 11 1111 125667899999999999999
Q ss_pred CeeEEEEcC
Q 037161 81 SGIRFQCFV 89 (99)
Q Consensus 81 ~~~~~~~~~ 89 (99)
+++++....
T Consensus 218 ~~~~~~~~~ 226 (241)
T 2ex4_A 218 SLLAEERQE 226 (241)
T ss_dssp CEEEEEECC
T ss_pred eEEEeeecC
Confidence 999998654
No 26
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.63 E-value=8.8e-08 Score=61.36 Aligned_cols=85 Identities=14% Similarity=0.056 Sum_probs=52.9
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCc------eecCHHHHHHH
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRG------KVRTKHEFINL 74 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g------~~rt~~e~~~l 74 (99)
+++|++++++...+|+++++.| +|||++++.+...+.......... .......-....+. ...|.++|.++
T Consensus 115 ~~l~~~~~~~~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (218)
T 3ou2_A 115 HWLAHVPDDRFEAFWESVRSAV-APGGVVEFVDVTDHERRLEQQDDS--EPEVAVRRTLQDGRSFRIVKVFRSPAELTER 191 (218)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEECCCC--------------CEEEEECTTSCEEEEECCCCCHHHHHHH
T ss_pred chhhcCCHHHHHHHHHHHHHHc-CCCeEEEEEeCCCCccccchhhhc--ccccceeeecCCcchhhHhhcCCCHHHHHHH
Confidence 4789999999999999999999 999999999876532211100000 00000000001122 23499999999
Q ss_pred HHHcCCCeeEEEEc
Q 037161 75 ATAAGFSGIRFQCF 88 (99)
Q Consensus 75 l~~aGf~~~~~~~~ 88 (99)
++++||++......
T Consensus 192 l~~aGf~v~~~~~~ 205 (218)
T 3ou2_A 192 LTALGWSCSVDEVH 205 (218)
T ss_dssp HHHTTEEEEEEEEE
T ss_pred HHHCCCEEEeeecc
Confidence 99999995544433
No 27
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.63 E-value=8.5e-08 Score=61.14 Aligned_cols=82 Identities=12% Similarity=-0.006 Sum_probs=61.1
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+++|++++++..++|+++++.| +|||++++.+...+.. .. ++- ... ....+|.++|.++|+++||
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~L-~pgG~l~i~~~~~~~~--~~--------~~~---~~~-~~~~~~~~~~~~~l~~~Gf 174 (203)
T 3h2b_A 110 YSLIHMGPGELPDALVALRMAV-EDGGGLLMSFFSGPSL--EP--------MYH---PVA-TAYRWPLPELAQALETAGF 174 (203)
T ss_dssp SSSTTCCTTTHHHHHHHHHHTE-EEEEEEEEEEECCSSC--EE--------ECC---SSS-CEEECCHHHHHHHHHHTTE
T ss_pred hhHhcCCHHHHHHHHHHHHHHc-CCCcEEEEEEccCCch--hh--------hhc---hhh-hhccCCHHHHHHHHHHCCC
Confidence 3688999888999999999999 9999999987543321 00 000 011 4577899999999999999
Q ss_pred CeeEEEEcCC-CeeEEEE
Q 037161 81 SGIRFQCFVC-NSWVMEF 97 (99)
Q Consensus 81 ~~~~~~~~~~-~~~vie~ 97 (99)
+++++..... +...+..
T Consensus 175 ~~~~~~~~~~~p~~~l~~ 192 (203)
T 3h2b_A 175 QVTSSHWDPRFPHAYLTA 192 (203)
T ss_dssp EEEEEEECTTSSEEEEEE
T ss_pred cEEEEEecCCCcchhhhh
Confidence 9999987653 5555543
No 28
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.61 E-value=1.4e-07 Score=61.90 Aligned_cols=80 Identities=19% Similarity=0.265 Sum_probs=56.7
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+++|+|+| ..++|+++++.| +|||++++.+...+... ..... ...+..+....+.+.++.++|.++|+++||
T Consensus 95 ~~l~~~~~--~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf 166 (239)
T 1xxl_A 95 YAAHHFSD--VRKAVREVARVL-KQDGRFLLVDHYAPEDP---VLDEF--VNHLNRLRDPSHVRESSLSEWQAMFSANQL 166 (239)
T ss_dssp SCGGGCSC--HHHHHHHHHHHE-EEEEEEEEEEECBCSSH---HHHHH--HHHHHHHHCTTCCCCCBHHHHHHHHHHTTE
T ss_pred CchhhccC--HHHHHHHHHHHc-CCCcEEEEEEcCCCCCh---hHHHH--HHHHHHhccccccCCCCHHHHHHHHHHCCC
Confidence 36889987 568999999999 99999999998765431 11111 111111211224677899999999999999
Q ss_pred CeeEEEEc
Q 037161 81 SGIRFQCF 88 (99)
Q Consensus 81 ~~~~~~~~ 88 (99)
+++++...
T Consensus 167 ~~~~~~~~ 174 (239)
T 1xxl_A 167 AYQDIQKW 174 (239)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEee
Confidence 99887654
No 29
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.61 E-value=1.5e-08 Score=65.51 Aligned_cols=95 Identities=14% Similarity=0.092 Sum_probs=59.7
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHh---hhcC----------C-------
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFM---LTHS----------P------- 61 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m---~~~~----------~------- 61 (99)
++|.+..++..++|+++++.| +|||++++.+...+...... ........+..+ +... .
T Consensus 112 ~~~~~~~~~~~~~l~~~~~~L-~~gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (227)
T 1ve3_A 112 SIVHFEPLELNQVFKEVRRVL-KPSGKFIMYFTDLRELLPRL-KESLVVGQKYWISKVIPDQEERTVVIEFKSEQDSFRV 189 (227)
T ss_dssp CGGGCCHHHHHHHHHHHHHHE-EEEEEEEEEEECHHHHGGGC-CC---------CCEEEEETTTTEEEEEC-----CCEE
T ss_pred chHhCCHHHHHHHHHHHHHHc-CCCcEEEEEecChHHHHHHH-HhhhhcccceeecccccCccccEEEEEeccchhhhee
Confidence 466778888999999999999 99999999886432110000 000000000000 0000 0
Q ss_pred CceecCHHHHHHHHHHcCCCeeEEEEcCCCeeEEEEEC
Q 037161 62 RGKVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEFYK 99 (99)
Q Consensus 62 ~g~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~~k 99 (99)
....++ .+|.++|+++||+.+++.+++....+|+++|
T Consensus 190 ~~~~w~-~~~~~~l~~~GF~~v~~~~~~~~~~~i~~~~ 226 (227)
T 1ve3_A 190 RFNVWG-KTGVELLAKLYFTKEAEEKVGNYSYLTVYNP 226 (227)
T ss_dssp EEECCC-HHHHHHHHTTTEEEEEEEEETTTEEEEEEEE
T ss_pred ehhhhc-hHHHHHHHHHhhhHHHHHHhCCceeEEeeCC
Confidence 011222 4899999999999999999987888999876
No 30
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.60 E-value=5e-08 Score=65.89 Aligned_cols=74 Identities=15% Similarity=0.129 Sum_probs=54.5
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
.+||+++|++...+|++++++| +|||+++|.+...+. +.. .....+....... ....||.+|+.++| +||
T Consensus 165 ~vlh~~~d~~~~~~l~~~~~~L-~pGG~l~i~~~~~~~---~~~---~~~~~~~~~~~~~-~~~~~s~~ei~~~l--~G~ 234 (274)
T 2qe6_A 165 GMLHYLSPDVVDRVVGAYRDAL-APGSYLFMTSLVDTG---LPA---QQKLARITRENLG-EGWARTPEEIERQF--GDF 234 (274)
T ss_dssp TTGGGSCTTTHHHHHHHHHHHS-CTTCEEEEEEEBCSS---CHH---HHHHHHHHHHHHS-CCCCBCHHHHHHTT--TTC
T ss_pred chhhhCCcHHHHHHHHHHHHhC-CCCcEEEEEEecCcc---hHH---HHHHHHHHHhcCC-CCccCCHHHHHHHh--CCC
Confidence 3799999999999999999999 999999999976432 111 1122333222222 46789999999999 599
Q ss_pred CeeE
Q 037161 81 SGIR 84 (99)
Q Consensus 81 ~~~~ 84 (99)
++++
T Consensus 235 ~l~~ 238 (274)
T 2qe6_A 235 ELVE 238 (274)
T ss_dssp EECT
T ss_pred eEcc
Confidence 8775
No 31
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.60 E-value=1.6e-07 Score=61.85 Aligned_cols=80 Identities=20% Similarity=0.326 Sum_probs=59.5
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+++|++++++..++|+++++.| +|||++++.+...+...... ..+.-... .. +...+|.++|.++++++||
T Consensus 128 ~~l~~~~~~~~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~------~~~~~~~~-~~-~~~~~~~~~~~~~l~~~Gf 198 (266)
T 3ujc_A 128 DAILALSLENKNKLFQKCYKWL-KPTGTLLITDYCATEKENWD------DEFKEYVK-QR-KYTLITVEEYADILTACNF 198 (266)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEEEESCGGGCC------HHHHHHHH-HH-TCCCCCHHHHHHHHHHTTC
T ss_pred HHHHhcChHHHHHHHHHHHHHc-CCCCEEEEEEeccCCcccch------HHHHHHHh-cC-CCCCCCHHHHHHHHHHcCC
Confidence 3789998899999999999999 99999999998766521111 11111111 11 4567899999999999999
Q ss_pred CeeEEEEcC
Q 037161 81 SGIRFQCFV 89 (99)
Q Consensus 81 ~~~~~~~~~ 89 (99)
+++++....
T Consensus 199 ~~~~~~~~~ 207 (266)
T 3ujc_A 199 KNVVSKDLS 207 (266)
T ss_dssp EEEEEEECH
T ss_pred eEEEEEeCC
Confidence 999987653
No 32
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.59 E-value=7.8e-09 Score=66.20 Aligned_cols=91 Identities=14% Similarity=0.185 Sum_probs=56.8
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhh-hchHhhhcCCCceecCHHHHHHHHHHcC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQ-IDVFMLTHSPRGKVRTKHEFINLATAAG 79 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~-~dl~m~~~~~~g~~rt~~e~~~ll~~aG 79 (99)
+++|+++| ..++|+++++.| +|||++++.+...+.............. ......... +...+|.++|.++|+++|
T Consensus 119 ~~l~~~~~--~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~aG 194 (219)
T 3dlc_A 119 GSVFFWED--VATAFREIYRIL-KSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRK-NISQENVERFQNVLDEIG 194 (219)
T ss_dssp SCGGGCSC--HHHHHHHHHHHE-EEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHH-HSSHHHHHHHHHHHHHHT
T ss_pred chHhhccC--HHHHHHHHHHhC-CCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhh-ccccCCHHHHHHHHHHcC
Confidence 36788866 678999999999 9999999987543321000000000000 000000001 345668899999999999
Q ss_pred CCeeEEEEcCCCeeEE
Q 037161 80 FSGIRFQCFVCNSWVM 95 (99)
Q Consensus 80 f~~~~~~~~~~~~~vi 95 (99)
|+.+++........++
T Consensus 195 f~~v~~~~~~~~~~~~ 210 (219)
T 3dlc_A 195 ISSYEIILGDEGFWII 210 (219)
T ss_dssp CSSEEEEEETTEEEEE
T ss_pred CCeEEEEecCCceEEE
Confidence 9999998776655544
No 33
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.59 E-value=1.9e-07 Score=61.75 Aligned_cols=79 Identities=20% Similarity=0.391 Sum_probs=56.5
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhc-hHhhhcCCCceecCHHHHHHHHHHcC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQID-VFMLTHSPRGKVRTKHEFINLATAAG 79 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~d-l~m~~~~~~g~~rt~~e~~~ll~~aG 79 (99)
.++|+|+|. ..+|++++++| +|||++++.+...+..+ ... ..+. +..+........++.++|.++|+++|
T Consensus 111 ~~l~~~~d~--~~~l~~~~r~L-kpgG~l~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 181 (260)
T 1vl5_A 111 IAAHHFPNP--ASFVSEAYRVL-KKGGQLLLVDNSAPEND---AFD---VFYNYVEKERDYSHHRAWKKSDWLKMLEEAG 181 (260)
T ss_dssp SCGGGCSCH--HHHHHHHHHHE-EEEEEEEEEEEEBCSSH---HHH---HHHHHHHHHHCTTCCCCCBHHHHHHHHHHHT
T ss_pred hhhHhcCCH--HHHHHHHHHHc-CCCCEEEEEEcCCCCCH---HHH---HHHHHHHHhcCccccCCCCHHHHHHHHHHCC
Confidence 368999874 58999999999 99999999998766431 111 1111 11121122457789999999999999
Q ss_pred CCeeEEEEc
Q 037161 80 FSGIRFQCF 88 (99)
Q Consensus 80 f~~~~~~~~ 88 (99)
|+++.+...
T Consensus 182 f~~~~~~~~ 190 (260)
T 1vl5_A 182 FELEELHCF 190 (260)
T ss_dssp CEEEEEEEE
T ss_pred CeEEEEEEe
Confidence 999887654
No 34
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.59 E-value=4.9e-07 Score=61.36 Aligned_cols=96 Identities=16% Similarity=0.123 Sum_probs=59.6
Q ss_pred ccccCC-hHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhh----hhh----hhhc--hHhhhcCCCceecCHHH
Q 037161 2 ILHAWS-DEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATS----KAN----SQID--VFMLTHSPRGKVRTKHE 70 (99)
Q Consensus 2 vlHdw~-d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~----~~~----~~~d--l~m~~~~~~g~~rt~~e 70 (99)
++|.++ ++...++|+++++.| +|||++++.+...+...... .. ... .... +...........+|.++
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~L-kpgG~l~i~~~~~~~~~~~~-~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQAL-KPGGALVTSFLTPPPALSPD-SPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQ 273 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHE-EEEEEEEEECCCCCTTTCTT-CCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhc-CCCeEEEEEecCCCCccccc-ccceeeccccchhhhhhhHHHHHHhhhhhccCCHHH
Confidence 578885 445668999999999 99999999886544332111 00 000 0000 11111110114489999
Q ss_pred HHHHHHHcCCCeeEEEEcC-CCeeEEEEEC
Q 037161 71 FINLATAAGFSGIRFQCFV-CNSWVMEFYK 99 (99)
Q Consensus 71 ~~~ll~~aGf~~~~~~~~~-~~~~vie~~k 99 (99)
+.++|+++||+++++.... .....+.++|
T Consensus 274 ~~~~l~~aGF~~v~~~~~~~~~~~~v~a~K 303 (305)
T 3ocj_A 274 TRAQLEEAGFTDLRFEDDRARLFPTVIARK 303 (305)
T ss_dssp HHHHHHHTTCEEEEEECCTTSSSCEEEEEC
T ss_pred HHHHHHHCCCEEEEEEcccCceeeEEEEec
Confidence 9999999999999998654 3444555554
No 35
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.58 E-value=8.9e-08 Score=64.73 Aligned_cols=97 Identities=11% Similarity=0.160 Sum_probs=61.1
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchh--hhh----hh-------------hhchHhhh----
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSAT--SKA----NS-------------QIDVFMLT---- 58 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~--~~~----~~-------------~~dl~m~~---- 58 (99)
++|.+++++..++|+++++.| +|||++++.....+........ ..+ .. ...+.+..
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHL-EPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQEITIHPADET 238 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHE-EEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEEEEEEEESCC-
T ss_pred ccccCCHHHHHHHHHHHHHHc-CCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEEEEEEEeccCC
Confidence 467778888999999999999 9999999876543311000000 000 00 00011000
Q ss_pred ------cCCCceecCHHHHHHHHHHcCCCeeEEEEcCC------CeeEEEEEC
Q 037161 59 ------HSPRGKVRTKHEFINLATAAGFSGIRFQCFVC------NSWVMEFYK 99 (99)
Q Consensus 59 ------~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~------~~~vie~~k 99 (99)
....-+.+|.+||.++|++|||+++++.++.. ...++|+.+
T Consensus 239 ~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g~~~~~~~lvea~~ 291 (299)
T 3g2m_A 239 TDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAVM 291 (299)
T ss_dssp -CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTSSSSCCEEEEEEEC
T ss_pred CCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCCCCccceeeeehhh
Confidence 00023367999999999999999999998752 346888753
No 36
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.54 E-value=4.4e-07 Score=61.73 Aligned_cols=87 Identities=17% Similarity=0.291 Sum_probs=60.0
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCc----hhh-hhhhhhchHhhhcCCCceecCHHHHHHHH
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENS----ATS-KANSQIDVFMLTHSPRGKVRTKHEFINLA 75 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~----~~~-~~~~~~dl~m~~~~~~g~~rt~~e~~~ll 75 (99)
.++|++++++..++|+++++.| +|||++++.+...+...... ... ......+...-....++..+|.+++.+++
T Consensus 163 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l 241 (318)
T 2fk8_A 163 EAFEHFGHENYDDFFKRCFNIM-PADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHG 241 (318)
T ss_dssp SCGGGTCGGGHHHHHHHHHHHS-CTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHH
T ss_pred ChHHhcCHHHHHHHHHHHHHhc-CCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHH
Confidence 3688898888999999999999 99999999998765421100 000 00001111111112367888999999999
Q ss_pred HHcCCCeeEEEEc
Q 037161 76 TAAGFSGIRFQCF 88 (99)
Q Consensus 76 ~~aGf~~~~~~~~ 88 (99)
+++||+++++..+
T Consensus 242 ~~aGf~~~~~~~~ 254 (318)
T 2fk8_A 242 EKAGFTVPEPLSL 254 (318)
T ss_dssp HHTTCBCCCCEEC
T ss_pred HhCCCEEEEEEec
Confidence 9999999988765
No 37
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.52 E-value=2.5e-07 Score=61.38 Aligned_cols=80 Identities=15% Similarity=0.128 Sum_probs=57.3
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS 81 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~ 81 (99)
++|+++|. .++|+++++.| +|||+++|.+.......... . ...++-..... ..+..+|.++|.++++++||+
T Consensus 138 ~l~~~~~~--~~~l~~~~~~L-~pgG~l~i~~~~~~~~~~~~-~---~~~~~~~~~~~-~~~~~~~~~~~~~~l~~aGf~ 209 (273)
T 3bus_A 138 SLHHMPDR--GRALREMARVL-RPGGTVAIADFVLLAPVEGA-K---KEAVDAFRAGG-GVLSLGGIDEYESDVRQAELV 209 (273)
T ss_dssp CTTTSSCH--HHHHHHHHTTE-EEEEEEEEEEEEESSCCCHH-H---HHHHHHHHHHH-TCCCCCCHHHHHHHHHHTTCE
T ss_pred hhhhCCCH--HHHHHHHHHHc-CCCeEEEEEEeeccCCCChh-H---HHHHHHHHhhc-CccCCCCHHHHHHHHHHcCCe
Confidence 67888774 78999999999 99999999998765432211 1 11111111112 267789999999999999999
Q ss_pred eeEEEEcC
Q 037161 82 GIRFQCFV 89 (99)
Q Consensus 82 ~~~~~~~~ 89 (99)
++++..++
T Consensus 210 ~~~~~~~~ 217 (273)
T 3bus_A 210 VTSTVDIS 217 (273)
T ss_dssp EEEEEECH
T ss_pred EEEEEECc
Confidence 99887653
No 38
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.52 E-value=2.1e-07 Score=60.65 Aligned_cols=69 Identities=19% Similarity=0.192 Sum_probs=54.9
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+++|.+++++..++|+++++.| +|||++++.+.........+ ...++.++|.++|+++||
T Consensus 140 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~l~~~Gf 199 (235)
T 3lcc_A 140 VFFCAIEPEMRPAWAKSMYELL-KPDGELITLMYPITDHVGGP-------------------PYKVDVSTFEEVLVPIGF 199 (235)
T ss_dssp SSTTTSCGGGHHHHHHHHHHHE-EEEEEEEEEECCCSCCCSCS-------------------SCCCCHHHHHHHHGGGTE
T ss_pred hhhhcCCHHHHHHHHHHHHHHC-CCCcEEEEEEecccccCCCC-------------------CccCCHHHHHHHHHHcCC
Confidence 3688999888999999999999 99999999886544322111 112678999999999999
Q ss_pred CeeEEEEcC
Q 037161 81 SGIRFQCFV 89 (99)
Q Consensus 81 ~~~~~~~~~ 89 (99)
+++++....
T Consensus 200 ~~~~~~~~~ 208 (235)
T 3lcc_A 200 KAVSVEENP 208 (235)
T ss_dssp EEEEEEECT
T ss_pred eEEEEEecC
Confidence 999988764
No 39
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.50 E-value=4e-07 Score=58.78 Aligned_cols=83 Identities=17% Similarity=0.112 Sum_probs=54.9
Q ss_pred CccccCCh-HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcC--------------CCcee
Q 037161 1 SILHAWSD-EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS--------------PRGKV 65 (99)
Q Consensus 1 ~vlHdw~d-~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~--------------~~g~~ 65 (99)
+++|.++| +...++|+++++.| +|||++++.+...+... + ... .....++...... .....
T Consensus 109 ~~l~~~~~~~~~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~-~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (235)
T 3sm3_A 109 AFLTSVPDPKERSRIIKEVFRVL-KPGAYLYLVEFGQNWHL-K-LYR-KRYLHDFPITKEEGSFLARDPETGETEFIAHH 184 (235)
T ss_dssp SCGGGCCCHHHHHHHHHHHHHHE-EEEEEEEEEEEBCCTTS-H-HHH-HHHHHHHHHHCSTTEEEEECTTTCCEEEEEEC
T ss_pred chhhcCCCHHHHHHHHHHHHHHc-CCCeEEEEEECCcchhH-H-HHH-HHhhhhccchhhhcceEecccccCCcceeeEe
Confidence 36788865 45779999999999 99999999987643221 1 110 1111111111100 01257
Q ss_pred cCHHHHHHHHHHcCCCeeEEEE
Q 037161 66 RTKHEFINLATAAGFSGIRFQC 87 (99)
Q Consensus 66 rt~~e~~~ll~~aGf~~~~~~~ 87 (99)
+|.++|.++|+++||+++++..
T Consensus 185 ~~~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 185 FTEKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp BCHHHHHHHHHTTTEEEEEEEE
T ss_pred CCHHHHHHHHHHcCCEEEEEEe
Confidence 8999999999999999999864
No 40
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.49 E-value=3.7e-07 Score=61.39 Aligned_cols=77 Identities=16% Similarity=0.242 Sum_probs=56.3
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+++|+++| ..++|+++++.| +|||++++.+...+...... .....++. . . .....|..+|.++++++||
T Consensus 158 ~~l~~~~~--~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~---~~~~~~~~--~-~--~~~~~~~~~~~~~l~~aGf 226 (297)
T 2o57_A 158 DAFLHSPD--KLKVFQECARVL-KPRGVMAITDPMKEDGIDKS---SIQPILDR--I-K--LHDMGSLGLYRSLAKECGL 226 (297)
T ss_dssp SCGGGCSC--HHHHHHHHHHHE-EEEEEEEEEEEEECTTCCGG---GGHHHHHH--H-T--CSSCCCHHHHHHHHHHTTE
T ss_pred chhhhcCC--HHHHHHHHHHHc-CCCeEEEEEEeccCCCCchH---HHHHHHHH--h-c--CCCCCCHHHHHHHHHHCCC
Confidence 36888888 789999999999 99999999998766543221 11111211 1 1 2345689999999999999
Q ss_pred CeeEEEEc
Q 037161 81 SGIRFQCF 88 (99)
Q Consensus 81 ~~~~~~~~ 88 (99)
+++++..+
T Consensus 227 ~~~~~~~~ 234 (297)
T 2o57_A 227 VTLRTFSR 234 (297)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 99998765
No 41
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.48 E-value=7e-07 Score=58.41 Aligned_cols=77 Identities=16% Similarity=0.264 Sum_probs=56.8
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+++|++++++..++|+++++.| +|||++++...... .. . ...+. .....+....+.+++.++++++||
T Consensus 109 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~~~~----~~-~----~~~~~--~~~~~~~~~~~~~~l~~~l~~aGf 176 (240)
T 3dli_A 109 HFVEHLDPERLFELLSLCYSKM-KYSSYIVIESPNPT----SL-Y----SLINF--YIDPTHKKPVHPETLKFILEYLGF 176 (240)
T ss_dssp SCGGGSCGGGHHHHHHHHHHHB-CTTCCEEEEEECTT----SH-H----HHHHH--TTSTTCCSCCCHHHHHHHHHHHTC
T ss_pred CchhhCCcHHHHHHHHHHHHHc-CCCcEEEEEeCCcc----hh-H----HHHHH--hcCccccccCCHHHHHHHHHHCCC
Confidence 4789999988999999999999 99999998664311 10 1 11111 111225577899999999999999
Q ss_pred CeeEEEEcC
Q 037161 81 SGIRFQCFV 89 (99)
Q Consensus 81 ~~~~~~~~~ 89 (99)
+++++....
T Consensus 177 ~~~~~~~~~ 185 (240)
T 3dli_A 177 RDVKIEFFE 185 (240)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEec
Confidence 999987654
No 42
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.47 E-value=4.7e-07 Score=56.12 Aligned_cols=76 Identities=9% Similarity=0.118 Sum_probs=57.2
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+++|+++| ...+|+++++.| +|||++++.+...+.....+. ....+|.++|.++++ ||
T Consensus 83 ~~l~~~~~--~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~l~--Gf 140 (170)
T 3i9f_A 83 NSFHDMDD--KQHVISEVKRIL-KDDGRVIIIDWRKENTGIGPP-----------------LSIRMDEKDYMGWFS--NF 140 (170)
T ss_dssp SCSTTCSC--HHHHHHHHHHHE-EEEEEEEEEEECSSCCSSSSC-----------------GGGCCCHHHHHHHTT--TE
T ss_pred cchhcccC--HHHHHHHHHHhc-CCCCEEEEEEcCccccccCch-----------------HhhhcCHHHHHHHHh--Cc
Confidence 36788876 568999999999 999999999876554322110 123378999999999 99
Q ss_pred CeeEEEEcCCCeeEEEEE
Q 037161 81 SGIRFQCFVCNSWVMEFY 98 (99)
Q Consensus 81 ~~~~~~~~~~~~~vie~~ 98 (99)
+++++.........+.+.
T Consensus 141 ~~~~~~~~~~~~~~l~~~ 158 (170)
T 3i9f_A 141 VVEKRFNPTPYHFGLVLK 158 (170)
T ss_dssp EEEEEECSSTTEEEEEEE
T ss_pred EEEEccCCCCceEEEEEe
Confidence 999999887666555553
No 43
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.45 E-value=1e-06 Score=59.54 Aligned_cols=87 Identities=16% Similarity=0.302 Sum_probs=59.6
Q ss_pred ccccCCh-------HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhh-----hhhhhhchHhhhcCCCceecCHH
Q 037161 2 ILHAWSD-------EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATS-----KANSQIDVFMLTHSPRGKVRTKH 69 (99)
Q Consensus 2 vlHdw~d-------~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~-----~~~~~~dl~m~~~~~~g~~rt~~ 69 (99)
++|+++| +...++|+++++.| +|||+++|.+...++........ ......+...-....++...+.+
T Consensus 146 ~~~~~~d~~~~~~~~~~~~~l~~~~~~L-kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~ 224 (302)
T 3hem_A 146 AFEHFADGAGDAGFERYDTFFKKFYNLT-PDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRIS 224 (302)
T ss_dssp CGGGTTCCSSCCCTTHHHHHHHHHHHSS-CTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHH
T ss_pred hHHhcCccccccchhHHHHHHHHHHHhc-CCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHH
Confidence 5778844 67889999999999 99999999998766431100000 00000122111123478899999
Q ss_pred HHHHHHHHcCCCeeEEEEcC
Q 037161 70 EFINLATAAGFSGIRFQCFV 89 (99)
Q Consensus 70 e~~~ll~~aGf~~~~~~~~~ 89 (99)
++.++++++||+++++...+
T Consensus 225 ~~~~~l~~aGf~~~~~~~~~ 244 (302)
T 3hem_A 225 QVDYYSSNAGWKVERYHRIG 244 (302)
T ss_dssp HHHHHHHHHTCEEEEEEECG
T ss_pred HHHHHHHhCCcEEEEEEeCc
Confidence 99999999999999987764
No 44
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.44 E-value=6.9e-07 Score=58.10 Aligned_cols=96 Identities=11% Similarity=0.152 Sum_probs=57.2
Q ss_pred ccccC-ChHHHHHHHHHHHHhccCCCceEEEEeeecCCC-----CCCc--------hhh--------hhhhhhchHhhhc
Q 037161 2 ILHAW-SDEHCLKLLKNCYESINKEDGKLIVVEAVLPEL-----PENS--------ATS--------KANSQIDVFMLTH 59 (99)
Q Consensus 2 vlHdw-~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~-----~~~~--------~~~--------~~~~~~dl~m~~~ 59 (99)
++|++ ++++..++|+++++.| +|||++++ +...+.. .... ... ......++.++..
T Consensus 106 ~~~~~~~~~~~~~~l~~~~~~L-~pgG~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (243)
T 3d2l_A 106 SLNYLQTEADVKQTFDSAARLL-TDGGKLLF-DVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVHELTFFIE 183 (243)
T ss_dssp GGGGCCSHHHHHHHHHHHHHHE-EEEEEEEE-EEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEEEEEEEE
T ss_pred chhhcCCHHHHHHHHHHHHHhc-CCCeEEEE-EcCCHHHHHHhcCCcceeEECCCcEEEEEeecCccccEEEEEEEEEEE
Confidence 56666 6678899999999999 99999886 3211100 0000 000 0000111222211
Q ss_pred CCCc-----------eecCHHHHHHHHHHcCCCeeEEEEcC--------CCeeEEEEEC
Q 037161 60 SPRG-----------KVRTKHEFINLATAAGFSGIRFQCFV--------CNSWVMEFYK 99 (99)
Q Consensus 60 ~~~g-----------~~rt~~e~~~ll~~aGf~~~~~~~~~--------~~~~vie~~k 99 (99)
..+| +.+|.+|+.++|++|||+++++.... +...++.|+|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~va~K 242 (243)
T 3d2l_A 184 GEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGDFKSDAPTETAERIFFVAEK 242 (243)
T ss_dssp CTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEETTSSSCCCTTCSEEEEEEEE
T ss_pred cCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecCcccCCCCCCceEEEEEEEe
Confidence 1122 46799999999999999999997541 2345677765
No 45
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.40 E-value=6.5e-07 Score=57.35 Aligned_cols=72 Identities=10% Similarity=0.065 Sum_probs=53.9
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcC-
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAG- 79 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aG- 79 (99)
+++|++++++...+|+++++.| +|||++++.......... .... ..-..++.++|.++|+++|
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~--------~~~~-------~~~~~~~~~~~~~~l~~aG~ 173 (211)
T 3e23_A 110 ACLLHVPRDELADVLKLIWRAL-KPGGLFYASYKSGEGEGR--------DKLA-------RYYNYPSEEWLRARYAEAGT 173 (211)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEECCSSCEE--------CTTS-------CEECCCCHHHHHHHHHHHCC
T ss_pred CchhhcCHHHHHHHHHHHHHhc-CCCcEEEEEEcCCCcccc--------cccc-------hhccCCCHHHHHHHHHhCCC
Confidence 3789999999999999999999 999999997543221100 0000 1234578999999999999
Q ss_pred CCeeEEEEc
Q 037161 80 FSGIRFQCF 88 (99)
Q Consensus 80 f~~~~~~~~ 88 (99)
|+++++...
T Consensus 174 f~~~~~~~~ 182 (211)
T 3e23_A 174 WASVAVESS 182 (211)
T ss_dssp CSEEEEEEE
T ss_pred cEEEEEEec
Confidence 999998754
No 46
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.38 E-value=1.4e-06 Score=61.08 Aligned_cols=76 Identities=20% Similarity=0.304 Sum_probs=55.6
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS 81 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~ 81 (99)
++|.++| -.++|+++++.| +|||++++.+...+... ... ...+....... .+..++.++|.++|+++||+
T Consensus 175 ~l~~~~d--~~~~l~~~~r~L-kpgG~l~i~~~~~~~~~-~~~-----~~~~~~~~~~~-~~~~~~~~~~~~ll~~aGF~ 244 (383)
T 4fsd_A 175 VCNLSTN--KLALFKEIHRVL-RDGGELYFSDVYADRRL-SEA-----AQQDPILYGEC-LGGALYLEDFRRLVAEAGFR 244 (383)
T ss_dssp CGGGCSC--HHHHHHHHHHHE-EEEEEEEEEEEEESSCC-CHH-----HHHCHHHHHTT-CTTCCBHHHHHHHHHHTTCC
T ss_pred chhcCCC--HHHHHHHHHHHc-CCCCEEEEEEecccccc-CHh-----HhhhHHHhhcc-cccCCCHHHHHHHHHHCCCc
Confidence 6788877 579999999999 99999999998765432 111 11122223333 56778899999999999999
Q ss_pred eeEEEE
Q 037161 82 GIRFQC 87 (99)
Q Consensus 82 ~~~~~~ 87 (99)
.+++..
T Consensus 245 ~v~~~~ 250 (383)
T 4fsd_A 245 DVRLVS 250 (383)
T ss_dssp CEEEEE
T ss_pred eEEEEe
Confidence 887754
No 47
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.38 E-value=7.9e-07 Score=57.12 Aligned_cols=67 Identities=19% Similarity=0.242 Sum_probs=52.2
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS 81 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~ 81 (99)
++| |+ +...+|+++++.| +|||++++.|.... ..+.++|.++++++||+
T Consensus 124 ~l~-~~--~~~~~l~~~~~~L-~~gG~l~i~~~~~~---------------------------~~~~~~~~~~l~~~Gf~ 172 (215)
T 2zfu_A 124 SLM-GT--NIRDFLEEANRVL-KPGGLLKVAEVSSR---------------------------FEDVRTFLRAVTKLGFK 172 (215)
T ss_dssp CCC-SS--CHHHHHHHHHHHE-EEEEEEEEEECGGG---------------------------CSCHHHHHHHHHHTTEE
T ss_pred hcc-cc--CHHHHHHHHHHhC-CCCeEEEEEEcCCC---------------------------CCCHHHHHHHHHHCCCE
Confidence 566 44 3689999999999 99999999874210 11789999999999999
Q ss_pred eeEEEEcCCCeeEEEEEC
Q 037161 82 GIRFQCFVCNSWVMEFYK 99 (99)
Q Consensus 82 ~~~~~~~~~~~~vie~~k 99 (99)
++......+...++.++|
T Consensus 173 ~~~~~~~~~~~~~~~~~k 190 (215)
T 2zfu_A 173 IVSKDLTNSHFFLFDFQK 190 (215)
T ss_dssp EEEEECCSTTCEEEEEEE
T ss_pred EEEEecCCCeEEEEEEEe
Confidence 998766666677777764
No 48
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.36 E-value=4.2e-07 Score=59.04 Aligned_cols=95 Identities=7% Similarity=0.000 Sum_probs=57.3
Q ss_pred ccccC-ChHHHHHHHHHHHHhccCCCceEEEEeeecCCC-----CCCch---hhh-----------hhhhhchHhhhcCC
Q 037161 2 ILHAW-SDEHCLKLLKNCYESINKEDGKLIVVEAVLPEL-----PENSA---TSK-----------ANSQIDVFMLTHSP 61 (99)
Q Consensus 2 vlHdw-~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~-----~~~~~---~~~-----------~~~~~dl~m~~~~~ 61 (99)
++|++ ++++..++|+++++.| +|||++++ +...+.. +.... ... .....++.++...
T Consensus 111 ~l~~~~~~~~~~~~l~~~~~~L-~pgG~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 187 (246)
T 1y8c_A 111 STNYIIDSDDLKKYFKAVSNHL-KEGGVFIF-DINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRD- 187 (246)
T ss_dssp GGGGCCSHHHHHHHHHHHHTTE-EEEEEEEE-EEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred cccccCCHHHHHHHHHHHHHhc-CCCcEEEE-EecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEec-
Confidence 77888 4478899999999999 99999887 3221110 00000 000 0000111111111
Q ss_pred C-----------ceecCHHHHHHHHHHcCCCeeEEEEc--------CCCeeEEEEEC
Q 037161 62 R-----------GKVRTKHEFINLATAAGFSGIRFQCF--------VCNSWVMEFYK 99 (99)
Q Consensus 62 ~-----------g~~rt~~e~~~ll~~aGf~~~~~~~~--------~~~~~vie~~k 99 (99)
+ -+.+|.++|.++|++|||+++++... .+...++.|+|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK 244 (246)
T 1y8c_A 188 GEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLVKL 244 (246)
T ss_dssp SSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEEEE
T ss_pred CCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEEEe
Confidence 2 25569999999999999999999754 12445666665
No 49
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.36 E-value=6.8e-07 Score=59.44 Aligned_cols=82 Identities=21% Similarity=0.267 Sum_probs=55.0
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCC---CCCchh-hhhhhhhchHhhhcCCCceecCHHHHHHHHH
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPEL---PENSAT-SKANSQIDVFMLTHSPRGKVRTKHEFINLAT 76 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~---~~~~~~-~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~ 76 (99)
+++|+++|.. .+|+++++.| +|||.+++.+...... +..+.. ........ ..... ++..++..++.++|+
T Consensus 113 ~~l~~~~~~~--~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~l~~~l~ 186 (276)
T 3mgg_A 113 FVLEHLQSPE--EALKSLKKVL-KPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIR--VQAYM-KGNSLVGRQIYPLLQ 186 (276)
T ss_dssp SCGGGCSCHH--HHHHHHHHHE-EEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHH--HHHHT-TCCTTGGGGHHHHHH
T ss_pred chhhhcCCHH--HHHHHHHHHc-CCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHH--HHHhc-CCCcchHHHHHHHHH
Confidence 3688888854 8999999999 9999999998643211 111111 11111111 12222 667788899999999
Q ss_pred HcCCCeeEEEEc
Q 037161 77 AAGFSGIRFQCF 88 (99)
Q Consensus 77 ~aGf~~~~~~~~ 88 (99)
+|||+++++...
T Consensus 187 ~aGf~~v~~~~~ 198 (276)
T 3mgg_A 187 ESGFEKIRVEPR 198 (276)
T ss_dssp HTTCEEEEEEEE
T ss_pred HCCCCeEEEeeE
Confidence 999999998754
No 50
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.34 E-value=6.7e-07 Score=58.72 Aligned_cols=76 Identities=12% Similarity=0.082 Sum_probs=54.8
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS 81 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~ 81 (99)
++|+++| ..++|+++++.| +|||++++.+......+.... . ... ... ......+|.++|.++++++||+
T Consensus 112 ~~~~~~~--~~~~l~~~~r~L-kpgG~l~~~~~~~~~~~~~~~---~---~~~-~~~-~~~~~~~~~~~~~~~l~~aGf~ 180 (256)
T 1nkv_A 112 ATWIAGG--FAGAEELLAQSL-KPGGIMLIGEPYWRQLPATEE---I---AQA-CGV-SSTSDFLTLPGLVGAFDDLGYD 180 (256)
T ss_dssp CGGGTSS--SHHHHHHHTTSE-EEEEEEEEEEEEETTCCSSHH---H---HHT-TTC-SCGGGSCCHHHHHHHHHTTTBC
T ss_pred ChHhcCC--HHHHHHHHHHHc-CCCeEEEEecCcccCCCChHH---H---HHH-Hhc-ccccccCCHHHHHHHHHHCCCe
Confidence 5788876 688999999999 999999999987654432211 1 110 111 1134678999999999999999
Q ss_pred eeEEEEc
Q 037161 82 GIRFQCF 88 (99)
Q Consensus 82 ~~~~~~~ 88 (99)
++++...
T Consensus 181 ~~~~~~~ 187 (256)
T 1nkv_A 181 VVEMVLA 187 (256)
T ss_dssp CCEEEEC
T ss_pred eEEEEeC
Confidence 9887653
No 51
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.34 E-value=1.1e-06 Score=57.09 Aligned_cols=77 Identities=16% Similarity=0.072 Sum_probs=53.3
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+++|+++| ..++|+++++.| +|||+++|.+........ .......+ -. ......++..++.++++++||
T Consensus 124 ~~l~~~~~--~~~~l~~~~~~L-~pgG~l~i~~~~~~~~~~---~~~~~~~~----~~-~~~~~~~~~~~~~~~l~~~Gf 192 (242)
T 3l8d_A 124 NSLEWTEE--PLRALNEIKRVL-KSDGYACIAILGPTAKPR---ENSYPRLY----GK-DVVCNTMMPWEFEQLVKEQGF 192 (242)
T ss_dssp SCTTSSSC--HHHHHHHHHHHE-EEEEEEEEEEECTTCGGG---GGGGGGGG----TC-CCSSCCCCHHHHHHHHHHTTE
T ss_pred ChHhhccC--HHHHHHHHHHHh-CCCeEEEEEEcCCcchhh---hhhhhhhc----cc-cccccCCCHHHHHHHHHHcCC
Confidence 36788876 458899999999 999999998854332211 01111111 11 124567899999999999999
Q ss_pred CeeEEEEc
Q 037161 81 SGIRFQCF 88 (99)
Q Consensus 81 ~~~~~~~~ 88 (99)
++++...+
T Consensus 193 ~~~~~~~~ 200 (242)
T 3l8d_A 193 KVVDGIGV 200 (242)
T ss_dssp EEEEEEEE
T ss_pred EEEEeecc
Confidence 99998754
No 52
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.31 E-value=8.8e-07 Score=56.78 Aligned_cols=79 Identities=15% Similarity=0.114 Sum_probs=50.2
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhc-----CCCceecCHHHHHHHHH
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTH-----SPRGKVRTKHEFINLAT 76 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~-----~~~g~~rt~~e~~~ll~ 76 (99)
++| ++| ..++|+++++.| +|||+++|.+............. .......... ......+|.++|.++|+
T Consensus 125 ~l~-~~~--~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 197 (227)
T 3e8s_A 125 ALL-HQD--IIELLSAMRTLL-VPGGALVIQTLHPWSVADGDYQD---GWREESFAGFAGDWQPMPWYFRTLASWLNALD 197 (227)
T ss_dssp CCC-SSC--CHHHHHHHHHTE-EEEEEEEEEECCTTTTCTTCCSC---EEEEECCTTSSSCCCCEEEEECCHHHHHHHHH
T ss_pred hhh-hhh--HHHHHHHHHHHh-CCCeEEEEEecCccccCcccccc---ccchhhhhccccCcccceEEEecHHHHHHHHH
Confidence 466 444 568999999999 99999999886543322111000 0000000000 00235679999999999
Q ss_pred HcCCCeeEEEE
Q 037161 77 AAGFSGIRFQC 87 (99)
Q Consensus 77 ~aGf~~~~~~~ 87 (99)
+|||+++++..
T Consensus 198 ~aGf~~~~~~~ 208 (227)
T 3e8s_A 198 MAGLRLVSLQE 208 (227)
T ss_dssp HTTEEEEEEEC
T ss_pred HcCCeEEEEec
Confidence 99999999875
No 53
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.29 E-value=1.9e-06 Score=58.59 Aligned_cols=76 Identities=11% Similarity=0.093 Sum_probs=54.8
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS 81 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~ 81 (99)
++|.++ ..++|+++++.| +|||++++.+...++..... . .....++- .. ....+|.++|.++++++||+
T Consensus 194 ~l~~~~---~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~-~-~~~~~~~~--~~---~~~~~s~~~~~~~l~~aGf~ 262 (312)
T 3vc1_A 194 STMYVD---LHDLFSEHSRFL-KVGGRYVTITGCWNPRYGQP-S-KWVSQINA--HF---ECNIHSRREYLRAMADNRLV 262 (312)
T ss_dssp CGGGSC---HHHHHHHHHHHE-EEEEEEEEEEEEECTTTCSC-C-HHHHHHHH--HH---TCCCCBHHHHHHHHHTTTEE
T ss_pred chhhCC---HHHHHHHHHHHc-CCCcEEEEEEccccccccch-h-HHHHHHHh--hh---cCCCCCHHHHHHHHHHCCCE
Confidence 577773 889999999999 99999999998776543221 1 11111111 11 12478899999999999999
Q ss_pred eeEEEEc
Q 037161 82 GIRFQCF 88 (99)
Q Consensus 82 ~~~~~~~ 88 (99)
++++..+
T Consensus 263 ~~~~~~~ 269 (312)
T 3vc1_A 263 PHTIVDL 269 (312)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 9998875
No 54
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.26 E-value=1.8e-06 Score=56.04 Aligned_cols=78 Identities=15% Similarity=0.139 Sum_probs=53.0
Q ss_pred CccccCChHHHHHHHHHHH-HhccCCCceEEEEeeecCCCCCCchhhhhhh----------hhchHhhhcCCCceecCHH
Q 037161 1 SILHAWSDEHCLKLLKNCY-ESINKEDGKLIVVEAVLPELPENSATSKANS----------QIDVFMLTHSPRGKVRTKH 69 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~-~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~----------~~dl~m~~~~~~g~~rt~~ 69 (99)
++||+++|. .++|++++ +.| +|||+++|.+...... ...... ..+.. .. ..+.+.+|.+
T Consensus 111 ~~l~~~~~~--~~~l~~~~~~~L-kpgG~l~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~ 180 (250)
T 2p7i_A 111 HVLEHIDDP--VALLKRINDDWL-AEGGRLFLVCPNANAV-----SRQIAVKMGIISHNSAVTEAE-FA-HGHRCTYALD 180 (250)
T ss_dssp SCGGGCSSH--HHHHHHHHHTTE-EEEEEEEEEEECTTCH-----HHHHHHHTTSSSSTTCCCHHH-HH-TTCCCCCCHH
T ss_pred hHHHhhcCH--HHHHHHHHHHhc-CCCCEEEEEcCChHHH-----HHHHHHHcCccccchhccccc-cc-ccccccCCHH
Confidence 478888874 69999999 999 9999999977432210 000000 00000 01 1245778999
Q ss_pred HHHHHHHHcCCCeeEEEEc
Q 037161 70 EFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 70 e~~~ll~~aGf~~~~~~~~ 88 (99)
++.++|+++||+++++...
T Consensus 181 ~~~~~l~~~Gf~~~~~~~~ 199 (250)
T 2p7i_A 181 TLERDASRAGLQVTYRSGI 199 (250)
T ss_dssp HHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHCCCeEEEEeee
Confidence 9999999999999998754
No 55
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.22 E-value=3.1e-06 Score=57.01 Aligned_cols=75 Identities=9% Similarity=0.087 Sum_probs=50.2
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHh--hhcCCCceecCHHHHHHHHHHc
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFM--LTHSPRGKVRTKHEFINLATAA 78 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m--~~~~~~g~~rt~~e~~~ll~~a 78 (99)
++||+++| -.+.|+++++.| +|||+++|.+.. ++ .... ..+.-.. +........++.++|.++|+++
T Consensus 143 ~~l~~~~d--~~~~l~~~~r~L-kpgG~l~i~~~~-~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 211 (292)
T 2aot_A 143 QMLYYVKD--IPATLKFFHSLL-GTNAKMLIIVVS-GS---SGWD----KLWKKYGSRFPQDDLCQYITSDDLTQMLDNL 211 (292)
T ss_dssp SCGGGCSC--HHHHHHHHHHTE-EEEEEEEEEEEC-TT---SHHH----HHHHHHGGGSCCCTTCCCCCHHHHHHHHHHH
T ss_pred eeeeecCC--HHHHHHHHHHHc-CCCcEEEEEEec-CC---ccHH----HHHHHHHHhccCCCcccCCCHHHHHHHHHHC
Confidence 47999998 467899999999 999999998643 11 1111 1111100 1000123568899999999999
Q ss_pred CCCeeEEE
Q 037161 79 GFSGIRFQ 86 (99)
Q Consensus 79 Gf~~~~~~ 86 (99)
||+++...
T Consensus 212 Gf~~~~~~ 219 (292)
T 2aot_A 212 GLKYECYD 219 (292)
T ss_dssp TCCEEEEE
T ss_pred CCceEEEE
Confidence 99988743
No 56
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.21 E-value=3.1e-06 Score=54.63 Aligned_cols=79 Identities=18% Similarity=0.188 Sum_probs=52.2
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+++|.+++ ..++|+++++.| +|||++++.+...+ .. ............. .......+|.++|.++|+++||
T Consensus 110 ~~l~~~~~--~~~~l~~~~~~L-~pgG~l~i~~~~~~----~~-~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~Gf 180 (219)
T 1vlm_A 110 TTICFVDD--PERALKEAYRIL-KKGGYLIVGIVDRE----SF-LGREYEKNKEKSV-FYKNARFFSTEELMDLMRKAGF 180 (219)
T ss_dssp SCGGGSSC--HHHHHHHHHHHE-EEEEEEEEEEECSS----SH-HHHHHHHTTTC-C-CSTTCCCCCHHHHHHHHHHTTC
T ss_pred chHhhccC--HHHHHHHHHHHc-CCCcEEEEEEeCCc----cH-HHHHHHHHhcCcc-hhcccccCCHHHHHHHHHHCCC
Confidence 36777766 468999999999 99999999875321 11 1110000000000 1124567899999999999999
Q ss_pred CeeEEEEc
Q 037161 81 SGIRFQCF 88 (99)
Q Consensus 81 ~~~~~~~~ 88 (99)
+++++...
T Consensus 181 ~~~~~~~~ 188 (219)
T 1vlm_A 181 EEFKVVQT 188 (219)
T ss_dssp EEEEEEEE
T ss_pred eEEEEecc
Confidence 99998764
No 57
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.17 E-value=7.1e-06 Score=54.36 Aligned_cols=84 Identities=8% Similarity=0.002 Sum_probs=52.1
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhh-hhhhchHh--hh---cCCCceecCHHHHHHH
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKA-NSQIDVFM--LT---HSPRGKVRTKHEFINL 74 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~-~~~~dl~m--~~---~~~~g~~rt~~e~~~l 74 (99)
+++|++++... +++.++..+ +|||++++.+...+...... .... .....-.+ .. .......+|.+++.++
T Consensus 130 ~~l~~~~~~~~--~~~~~~~l~-~~gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~ 205 (275)
T 3bkx_A 130 HSLWYFASANA--LALLFKNMA-AVCDHVDVAEWSMQPTALDQ-IGHLQAAMIQGLLYAIAPSDVANIRTLITPDTLAQI 205 (275)
T ss_dssp SCGGGSSCHHH--HHHHHHHHT-TTCSEEEEEEECSSCSSGGG-HHHHHHHHHHHHHHHHSCCTTCSCCCCCCHHHHHHH
T ss_pred cchhhCCCHHH--HHHHHHHHh-CCCCEEEEEEecCCCCchhh-hhHHHHHHHHHHHhhccccccccccccCCHHHHHHH
Confidence 36788888653 666666666 88999999998776542211 1000 00110000 00 0101246899999999
Q ss_pred HHHcCCCeeEEEEc
Q 037161 75 ATAAGFSGIRFQCF 88 (99)
Q Consensus 75 l~~aGf~~~~~~~~ 88 (99)
++++||+++++..+
T Consensus 206 l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 206 AHDNTWTYTAGTIV 219 (275)
T ss_dssp HHHHTCEEEECCCB
T ss_pred HHHCCCeeEEEEEe
Confidence 99999999988765
No 58
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.16 E-value=6e-06 Score=51.50 Aligned_cols=61 Identities=16% Similarity=0.199 Sum_probs=44.4
Q ss_pred ccccC-ChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 2 ILHAW-SDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 2 vlHdw-~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
++|.. +| ..++|+++++.| +|||++++.+....... + ....|+.++|.++|+++||
T Consensus 72 ~l~~~~~~--~~~~l~~~~r~L-kpgG~l~~~~~~~~~~~------------~--------~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 72 VPGSTTLH--SAEILAEIARIL-RPGGCLFLKEPVETAVD------------N--------NSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp STTCCCCC--CHHHHHHHHHHE-EEEEEEEEEEEEESSSC------------S--------SSSSCCHHHHHHHHHHTTC
T ss_pred hhhhcccC--HHHHHHHHHHHC-CCCEEEEEEcccccccc------------c--------ccccCCHHHHHHHHHHCCC
Confidence 67777 55 478999999999 99999999665432210 0 1234689999999999999
Q ss_pred CeeEEEE
Q 037161 81 SGIRFQC 87 (99)
Q Consensus 81 ~~~~~~~ 87 (99)
+. +..
T Consensus 129 -i~-~~~ 133 (176)
T 2ld4_A 129 -VE-VKE 133 (176)
T ss_dssp -EE-EEE
T ss_pred -cE-eec
Confidence 44 443
No 59
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.15 E-value=2e-05 Score=51.10 Aligned_cols=85 Identities=14% Similarity=0.145 Sum_probs=51.3
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecC--CCCCCchh----h----hhhhhh-----chHhhhcCCCcee
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLP--ELPENSAT----S----KANSQI-----DVFMLTHSPRGKV 65 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~--~~~~~~~~----~----~~~~~~-----dl~m~~~~~~g~~ 65 (99)
+++|++++ ..++|+++++.| +|||++++...... ........ . .....+ ....+........
T Consensus 115 ~~l~~~~~--~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (243)
T 3bkw_A 115 LALHYVED--VARLFRTVHQAL-SPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHH 191 (243)
T ss_dssp SCGGGCSC--HHHHHHHHHHHE-EEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEE
T ss_pred ccccccch--HHHHHHHHHHhc-CcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEe
Confidence 36788876 678999999999 99999999764211 00000000 0 000000 0000110113445
Q ss_pred cCHHHHHHHHHHcCCCeeEEEEc
Q 037161 66 RTKHEFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 66 rt~~e~~~ll~~aGf~~~~~~~~ 88 (99)
+|.++|.++|++|||+++++...
T Consensus 192 ~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 192 RTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp CCHHHHHHHHHHTTCEEEEEEEC
T ss_pred ccHHHHHHHHHHcCCEeeeeccC
Confidence 79999999999999999998754
No 60
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.15 E-value=5.3e-06 Score=54.40 Aligned_cols=75 Identities=13% Similarity=0.093 Sum_probs=53.2
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS 81 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~ 81 (99)
++|+++ ..++|+++++.| +|||++++.+.......... ...+...-. ....+|.++|.++++++||+
T Consensus 123 ~l~~~~---~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~~~~------~~~~~~~~~---~~~~~~~~~~~~~l~~aGf~ 189 (257)
T 3f4k_A 123 AIYNIG---FERGMNEWSKYL-KKGGFIAVSEASWFTSERPA------EIEDFWMDA---YPEISVIPTCIDKMERAGYT 189 (257)
T ss_dssp CSCCCC---HHHHHHHHHTTE-EEEEEEEEEEEEESSSCCCH------HHHHHHHHH---CTTCCBHHHHHHHHHHTTEE
T ss_pred hHhhcC---HHHHHHHHHHHc-CCCcEEEEEEeeccCCCChH------HHHHHHHHh---CCCCCCHHHHHHHHHHCCCe
Confidence 567773 467999999999 99999999997644432221 111211111 23367899999999999999
Q ss_pred eeEEEEcC
Q 037161 82 GIRFQCFV 89 (99)
Q Consensus 82 ~~~~~~~~ 89 (99)
++.+...+
T Consensus 190 ~v~~~~~~ 197 (257)
T 3f4k_A 190 PTAHFILP 197 (257)
T ss_dssp EEEEEECC
T ss_pred EEEEEECC
Confidence 99987664
No 61
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.08 E-value=7e-06 Score=54.85 Aligned_cols=83 Identities=12% Similarity=0.074 Sum_probs=53.7
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhh-------cCCCceecCHHHHHH
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLT-------HSPRGKVRTKHEFIN 73 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~-------~~~~g~~rt~~e~~~ 73 (99)
+++|+++|. .++|+++++.| +|||++++.+...+..... ......++...-. .......+|.+++.+
T Consensus 144 ~~l~~~~~~--~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 217 (285)
T 4htf_A 144 AVLEWVADP--RSVLQTLWSVL-RPGGVLSLMFYNAHGLLMH---NMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYL 217 (285)
T ss_dssp SCGGGCSCH--HHHHHHHHHTE-EEEEEEEEEEEBHHHHHHH---HHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHH
T ss_pred chhhcccCH--HHHHHHHHHHc-CCCeEEEEEEeCCchHHHH---HHHhcCHHHHhhhccccccccCCCCCCCCHHHHHH
Confidence 367888774 68999999999 9999999987643221000 0000000110000 011346789999999
Q ss_pred HHHHcCCCeeEEEEcC
Q 037161 74 LATAAGFSGIRFQCFV 89 (99)
Q Consensus 74 ll~~aGf~~~~~~~~~ 89 (99)
+|+++||+++++..+.
T Consensus 218 ~l~~aGf~v~~~~~~~ 233 (285)
T 4htf_A 218 WLEEAGWQIMGKTGVR 233 (285)
T ss_dssp HHHHTTCEEEEEEEES
T ss_pred HHHHCCCceeeeeeEE
Confidence 9999999999988764
No 62
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.06 E-value=1.5e-05 Score=49.72 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=48.4
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS 81 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~ 81 (99)
++|..++++..++|+++++.| +|||++++.... ...++.+++.++++++||+
T Consensus 117 ~~~~~~~~~~~~~l~~~~~~l-~~~G~l~~~~~~---------------------------~~~~~~~~~~~~l~~~Gf~ 168 (195)
T 3cgg_A 117 VMGFLAEDGREPALANIHRAL-GADGRAVIGFGA---------------------------GRGWVFGDFLEVAERVGLE 168 (195)
T ss_dssp CGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEET---------------------------TSSCCHHHHHHHHHHHTEE
T ss_pred HHhhcChHHHHHHHHHHHHHh-CCCCEEEEEeCC---------------------------CCCcCHHHHHHHHHHcCCE
Confidence 577888888999999999999 999999885321 1126789999999999999
Q ss_pred eeEEEEc
Q 037161 82 GIRFQCF 88 (99)
Q Consensus 82 ~~~~~~~ 88 (99)
++++...
T Consensus 169 ~~~~~~~ 175 (195)
T 3cgg_A 169 LENAFES 175 (195)
T ss_dssp EEEEESS
T ss_pred Eeeeecc
Confidence 9988644
No 63
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.03 E-value=4.4e-06 Score=54.84 Aligned_cols=85 Identities=16% Similarity=0.121 Sum_probs=50.0
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecC-----------CCCCCchhhhhhhhhc-----hHhhhcCCCce
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLP-----------ELPENSATSKANSQID-----VFMLTHSPRGK 64 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~-----------~~~~~~~~~~~~~~~d-----l~m~~~~~~g~ 64 (99)
+++|+++| ..++|+++++.| +|||++++...... +.............++ ...........
T Consensus 116 ~~l~~~~~--~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (253)
T 3g5l_A 116 LALHYIAS--FDDICKKVYINL-KSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKY 192 (253)
T ss_dssp SCGGGCSC--HHHHHHHHHHHE-EEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEE
T ss_pred hhhhhhhh--HHHHHHHHHHHc-CCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccE
Confidence 36788866 679999999999 99999998643211 0000000000000000 00000000123
Q ss_pred ecCHHHHHHHHHHcCCCeeEEEEc
Q 037161 65 VRTKHEFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 65 ~rt~~e~~~ll~~aGf~~~~~~~~ 88 (99)
.||.++|.++|++|||+++++...
T Consensus 193 ~~t~~~~~~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 193 HRTVTTYIQTLLKNGFQINSVIEP 216 (253)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEECC
T ss_pred ecCHHHHHHHHHHcCCeeeeeecC
Confidence 359999999999999999998854
No 64
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.03 E-value=1.2e-05 Score=52.44 Aligned_cols=82 Identities=11% Similarity=0.016 Sum_probs=53.4
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhh-----hhchH-hhhcCCCceecCHHHHHHH
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANS-----QIDVF-MLTHSPRGKVRTKHEFINL 74 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~-----~~dl~-m~~~~~~g~~rt~~e~~~l 74 (99)
+++|..++++..++|+++++.| +|||+++|.|...++.. ....... ...+. .+........++.+++.++
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~L-kpgG~l~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILL-GKQGAMYLIELGTGCID---FFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELY 207 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHH-TTTCEEEEEEECTTHHH---HHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHH
T ss_pred chhhcCCHHHHHHHHHHHHHHc-CCCCEEEEEeCCccccH---HHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHH
Confidence 3688999888999999999999 99999999998644310 0000000 00000 0111112234799999999
Q ss_pred HHHcCCCeeEEEEc
Q 037161 75 ATAAGFSGIRFQCF 88 (99)
Q Consensus 75 l~~aGf~~~~~~~~ 88 (99)
| +||+++....+
T Consensus 208 ~--aGf~~~~~~~~ 219 (245)
T 3ggd_A 208 F--PDFEILSQGEG 219 (245)
T ss_dssp C--TTEEEEEEECC
T ss_pred h--CCCEEEecccc
Confidence 9 99999886543
No 65
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.03 E-value=1.3e-05 Score=56.49 Aligned_cols=76 Identities=12% Similarity=0.122 Sum_probs=54.8
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
++||+++| ...+|+++++.| +|||++++........ .....+..... .+...+|.++|.++++++||
T Consensus 179 ~vl~h~~d--~~~~l~~~~r~L-kpgG~l~i~~~~~~~~---------~~~~~~~~~~~-~~~~~~s~~~l~~ll~~aGf 245 (416)
T 4e2x_A 179 NTLCHIPY--VQSVLEGVDALL-APDGVFVFEDPYLGDI---------VAKTSFDQIFD-EHFFLFSATSVQGMAQRCGF 245 (416)
T ss_dssp SCGGGCTT--HHHHHHHHHHHE-EEEEEEEEEEECHHHH---------HHHTCGGGCST-TCCEECCHHHHHHHHHHTTE
T ss_pred ChHHhcCC--HHHHHHHHHHHc-CCCeEEEEEeCChHHh---------hhhcchhhhhh-hhhhcCCHHHHHHHHHHcCC
Confidence 47899986 789999999999 9999999865432211 00011111111 36678999999999999999
Q ss_pred CeeEEEEcC
Q 037161 81 SGIRFQCFV 89 (99)
Q Consensus 81 ~~~~~~~~~ 89 (99)
+++++...+
T Consensus 246 ~~~~~~~~~ 254 (416)
T 4e2x_A 246 ELVDVQRLP 254 (416)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEcc
Confidence 999998764
No 66
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.02 E-value=8.7e-06 Score=53.93 Aligned_cols=75 Identities=15% Similarity=0.076 Sum_probs=53.7
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS 81 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~ 81 (99)
++|.+ + -.++|+++++.| +|||++++.+.......... ...+...- . ....+|.+++.++++++||+
T Consensus 123 ~~~~~-~--~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~------~~~~~~~~--~-~~~~~~~~~~~~~l~~aGf~ 189 (267)
T 3kkz_A 123 AIYNI-G--FERGLNEWRKYL-KKGGYLAVSECSWFTDERPA------EINDFWMD--A-YPEIDTIPNQVAKIHKAGYL 189 (267)
T ss_dssp CGGGT-C--HHHHHHHHGGGE-EEEEEEEEEEEEESSSCCCH------HHHHHHHH--H-CTTCEEHHHHHHHHHHTTEE
T ss_pred Cceec-C--HHHHHHHHHHHc-CCCCEEEEEEeeecCCCChH------HHHHHHHH--h-CCCCCCHHHHHHHHHHCCCE
Confidence 56777 3 467899999999 99999999998755443221 11111111 1 23567899999999999999
Q ss_pred eeEEEEcC
Q 037161 82 GIRFQCFV 89 (99)
Q Consensus 82 ~~~~~~~~ 89 (99)
++++..++
T Consensus 190 ~v~~~~~~ 197 (267)
T 3kkz_A 190 PVATFILP 197 (267)
T ss_dssp EEEEEECC
T ss_pred EEEEEECC
Confidence 99998765
No 67
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.00 E-value=1.4e-05 Score=50.23 Aligned_cols=68 Identities=12% Similarity=0.054 Sum_probs=52.1
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+++|.+++++..++|+++++.| +|||++++++...++....+ ......++.+++.++|++ |
T Consensus 105 ~~l~~~~~~~~~~~l~~~~~~L-~~gG~l~~~~~~~~~~~~~~----------------~~~~~~~~~~~l~~~~~~--f 165 (199)
T 2xvm_A 105 VVLMFLEAKTIPGLIANMQRCT-KPGGYNLIVAAMDTADYPCT----------------VGFPFAFKEGELRRYYEG--W 165 (199)
T ss_dssp SCGGGSCGGGHHHHHHHHHHTE-EEEEEEEEEEEBCCSSSCCC----------------SCCSCCBCTTHHHHHTTT--S
T ss_pred chhhhCCHHHHHHHHHHHHHhc-CCCeEEEEEEeeccCCcCCC----------------CCCCCccCHHHHHHHhcC--C
Confidence 3688899888999999999999 99999999888755432110 013345688899999987 9
Q ss_pred CeeEEEE
Q 037161 81 SGIRFQC 87 (99)
Q Consensus 81 ~~~~~~~ 87 (99)
++++...
T Consensus 166 ~~~~~~~ 172 (199)
T 2xvm_A 166 ERVKYNE 172 (199)
T ss_dssp EEEEEEC
T ss_pred eEEEecc
Confidence 9988754
No 68
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.98 E-value=2.7e-06 Score=54.59 Aligned_cols=79 Identities=15% Similarity=0.194 Sum_probs=52.2
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhc-------hHhhhcCCCceecCHHHHHH
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQID-------VFMLTHSPRGKVRTKHEFIN 73 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~d-------l~m~~~~~~g~~rt~~e~~~ 73 (99)
+++|++++. .++|+++++.| +|||++++........ . ....... ...... ...+.+|.++|.+
T Consensus 101 ~~l~~~~~~--~~~l~~~~~~L-~~gG~l~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 170 (230)
T 3cc8_A 101 DVLEHLFDP--WAVIEKVKPYI-KQNGVILASIPNVSHI---S---VLAPLLAGNWTYTEYGLLDK-THIRFFTFNEMLR 170 (230)
T ss_dssp SCGGGSSCH--HHHHHHTGGGE-EEEEEEEEEEECTTSH---H---HHHHHHTTCCCCBSSSTTBT-TCCCCCCHHHHHH
T ss_pred ChhhhcCCH--HHHHHHHHHHc-CCCCEEEEEeCCcchH---H---HHHHHhcCCceeccCCCCCc-ceEEEecHHHHHH
Confidence 367888775 58999999999 9999999976432210 0 0000000 000011 1336689999999
Q ss_pred HHHHcCCCeeEEEEcC
Q 037161 74 LATAAGFSGIRFQCFV 89 (99)
Q Consensus 74 ll~~aGf~~~~~~~~~ 89 (99)
+++++||+++++....
T Consensus 171 ~l~~~Gf~~~~~~~~~ 186 (230)
T 3cc8_A 171 MFLKAGYSISKVDRVY 186 (230)
T ss_dssp HHHHTTEEEEEEEEEE
T ss_pred HHHHcCCeEEEEEecc
Confidence 9999999999988753
No 69
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=97.93 E-value=2.1e-05 Score=52.12 Aligned_cols=77 Identities=10% Similarity=0.075 Sum_probs=51.2
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+++|+++| ..++|+++++.| + ||++++.+...+...... . ...+.. +.... +...++.+++. +|++|||
T Consensus 102 ~~l~~~~~--~~~~l~~~~~~L-k-gG~~~~~~~~~~~~~~~~-~---~~~~~~-~~~~~-~~~~~~~~~~~-~l~~aGF 170 (261)
T 3ege_A 102 LAIHHFSH--LEKSFQEMQRII-R-DGTIVLLTFDIRLAQRIW-L---YDYFPF-LWEDA-LRFLPLDEQIN-LLQENTK 170 (261)
T ss_dssp SCGGGCSS--HHHHHHHHHHHB-C-SSCEEEEEECGGGCCCCG-G---GGTCHH-HHHHH-HTSCCHHHHHH-HHHHHHC
T ss_pred chHhhccC--HHHHHHHHHHHh-C-CcEEEEEEcCCchhHHHH-H---HHHHHH-Hhhhh-hhhCCCHHHHH-HHHHcCC
Confidence 36888866 678999999999 9 999999997543322111 0 011111 11111 24456778889 9999999
Q ss_pred CeeEEEEc
Q 037161 81 SGIRFQCF 88 (99)
Q Consensus 81 ~~~~~~~~ 88 (99)
+.+++...
T Consensus 171 ~~v~~~~~ 178 (261)
T 3ege_A 171 RRVEAIPF 178 (261)
T ss_dssp SEEEEEEC
T ss_pred CceeEEEe
Confidence 99998765
No 70
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.92 E-value=2.1e-05 Score=53.48 Aligned_cols=74 Identities=15% Similarity=0.192 Sum_probs=52.2
Q ss_pred ccccCChHH-HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 2 ILHAWSDEH-CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 2 vlHdw~d~~-~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+||..+|++ ...+|++++++| +|||.|++.+...+..+ . ....+.+..-.... ....||.+|+.++|. ||
T Consensus 169 vLH~l~d~~~p~~~l~~l~~~L-~PGG~Lvls~~~~d~~p--~---~~~~~~~~~~~~g~-p~~~rs~~ei~~~f~--Gl 239 (277)
T 3giw_A 169 IVHFVLDEDDAVGIVRRLLEPL-PSGSYLAMSIGTAEFAP--Q---EVGRVAREYAARNM-PMRLRTHAEAEEFFE--GL 239 (277)
T ss_dssp CGGGSCGGGCHHHHHHHHHTTS-CTTCEEEEEEECCTTSH--H---HHHHHHHHHHHTTC-CCCCCCHHHHHHTTT--TS
T ss_pred hHhcCCchhhHHHHHHHHHHhC-CCCcEEEEEeccCCCCH--H---HHHHHHHHHHhcCC-CCccCCHHHHHHHhC--CC
Confidence 689898877 689999999999 99999999887654221 1 11122232222222 356799999999995 99
Q ss_pred CeeE
Q 037161 81 SGIR 84 (99)
Q Consensus 81 ~~~~ 84 (99)
++++
T Consensus 240 elve 243 (277)
T 3giw_A 240 ELVE 243 (277)
T ss_dssp EECT
T ss_pred cccC
Confidence 9765
No 71
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=97.90 E-value=9.7e-06 Score=54.38 Aligned_cols=81 Identities=14% Similarity=0.131 Sum_probs=51.5
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeee-----cC---CCCCCch---hhhhhhhhchHhhhcCCCceecCHHH
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAV-----LP---ELPENSA---TSKANSQIDVFMLTHSPRGKVRTKHE 70 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~-----~~---~~~~~~~---~~~~~~~~dl~m~~~~~~g~~rt~~e 70 (99)
++|.++|. .++|+++++.| +|||.+++.+.. .. ++...+. .......+.-. .... +....+..+
T Consensus 98 ~l~~~~~~--~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~ 172 (284)
T 3gu3_A 98 FLLHMTTP--ETMLQKMIHSV-KKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESD-TQRN-GKDGNIGMK 172 (284)
T ss_dssp CGGGCSSH--HHHHHHHHHTE-EEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHH-HHHT-CCCTTGGGT
T ss_pred hhhcCCCH--HHHHHHHHHHc-CCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHH-hhhh-cccccHHHH
Confidence 67888774 59999999999 999999999865 11 1111100 00111111111 1122 455667789
Q ss_pred HHHHHHHcCCCeeEEEE
Q 037161 71 FINLATAAGFSGIRFQC 87 (99)
Q Consensus 71 ~~~ll~~aGf~~~~~~~ 87 (99)
+.++|++|||+.+++..
T Consensus 173 l~~~l~~aGF~~v~~~~ 189 (284)
T 3gu3_A 173 IPIYLSELGVKNIECRV 189 (284)
T ss_dssp HHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHcCCCeEEEEE
Confidence 99999999999998743
No 72
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.90 E-value=6.2e-06 Score=52.45 Aligned_cols=84 Identities=5% Similarity=-0.116 Sum_probs=54.4
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS 81 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~ 81 (99)
++|+++.++..++|+++++.| +|||++++.+...++.+...........+....-.....+..+|.+|+.++|+.+||.
T Consensus 98 ~l~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~ 176 (209)
T 2p8j_A 98 TIFHMRKNDVKEAIDEIKRVL-KPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVL 176 (209)
T ss_dssp CGGGSCHHHHHHHHHHHHHHE-EEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEE
T ss_pred hHHhCCHHHHHHHHHHHHHHc-CCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCce
Confidence 688898889999999999999 9999999998876543211000000000000000000023677999999999999987
Q ss_pred eeEEE
Q 037161 82 GIRFQ 86 (99)
Q Consensus 82 ~~~~~ 86 (99)
..+..
T Consensus 177 ~~~~~ 181 (209)
T 2p8j_A 177 FKEDR 181 (209)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 76554
No 73
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=97.84 E-value=2.3e-05 Score=51.34 Aligned_cols=79 Identities=13% Similarity=0.025 Sum_probs=48.3
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCC---CceecCHHHHHHHHHHc
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSP---RGKVRTKHEFINLATAA 78 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~---~g~~rt~~e~~~ll~~a 78 (99)
++|.++| ..++|+++++.| +|||++++. .. +.+ ..+.......+..+.-..... ....++.+++.++|+++
T Consensus 113 ~l~~~~~--~~~~l~~~~~~L-~pgG~l~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 186 (263)
T 2yqz_A 113 LWHLVPD--WPKVLAEAIRVL-KPGGALLEG-WD-QAE-ASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRL 186 (263)
T ss_dssp CGGGCTT--HHHHHHHHHHHE-EEEEEEEEE-EE-EEC-CCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHT
T ss_pred chhhcCC--HHHHHHHHHHHC-CCCcEEEEE-ec-CCC-ccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHc
Confidence 6788876 568999999999 999999987 22 211 111000000111111111010 23467889999999999
Q ss_pred CCCeeEEE
Q 037161 79 GFSGIRFQ 86 (99)
Q Consensus 79 Gf~~~~~~ 86 (99)
||+++.+.
T Consensus 187 Gf~~~~~~ 194 (263)
T 2yqz_A 187 GLKPRTRE 194 (263)
T ss_dssp TCCCEEEE
T ss_pred CCCcceEE
Confidence 99987664
No 74
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.83 E-value=4.1e-05 Score=49.08 Aligned_cols=75 Identities=8% Similarity=0.016 Sum_probs=47.3
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHH----HHHH
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFI----NLAT 76 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~----~ll~ 76 (99)
+++|++++++..++|+++++.| +|||.+++........ .+..+.... +........+|.+++. ++++
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~li~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~ 180 (217)
T 3jwh_A 110 EVIEHLDLSRLGAFERVLFEFA-QPKIVIVTTPNIEYNV-------KFANLPAGK-LRHKDHRFEWTRSQFQNWANKITE 180 (217)
T ss_dssp SCGGGCCHHHHHHHHHHHHTTT-CCSEEEEEEEBHHHHH-------HTC------------CCSCBCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHc-CCCEEEEEccCcccch-------hhccccccc-ccccccccccCHHHHHHHHHHHHH
Confidence 4789999999999999999999 9999666655421000 000000000 1111245567999999 8899
Q ss_pred HcCCCeeE
Q 037161 77 AAGFSGIR 84 (99)
Q Consensus 77 ~aGf~~~~ 84 (99)
++||++.-
T Consensus 181 ~~Gf~v~~ 188 (217)
T 3jwh_A 181 RFAYNVQF 188 (217)
T ss_dssp HSSEEEEE
T ss_pred HcCceEEE
Confidence 99997754
No 75
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=97.82 E-value=7.3e-05 Score=47.89 Aligned_cols=76 Identities=11% Similarity=0.086 Sum_probs=47.5
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHH----HHHH
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFI----NLAT 76 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~----~ll~ 76 (99)
+++|++++++..++|+++++.| +|||.+++.........-+ .+....+.. .......|.+++. ++++
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~L-kpgG~~i~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~l~~~~~~l~~ 180 (219)
T 3jwg_A 110 EVIEHLDENRLQAFEKVLFEFT-RPQTVIVSTPNKEYNFHYG-------NLFEGNLRH-RDHRFEWTRKEFQTWAVKVAE 180 (219)
T ss_dssp SCGGGCCHHHHHHHHHHHHTTT-CCSEEEEEEEBGGGGGCCC-------CT-----GG-GCCTTSBCHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHhh-CCCEEEEEccchhhhhhhc-------ccCcccccc-cCceeeecHHHHHHHHHHHHH
Confidence 4789999999999999999999 9999555544321100000 000000111 1244567899999 8899
Q ss_pred HcCCCeeEE
Q 037161 77 AAGFSGIRF 85 (99)
Q Consensus 77 ~aGf~~~~~ 85 (99)
++||++.-.
T Consensus 181 ~~Gf~v~~~ 189 (219)
T 3jwg_A 181 KYGYSVRFL 189 (219)
T ss_dssp HHTEEEEEE
T ss_pred HCCcEEEEE
Confidence 999966543
No 76
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=97.81 E-value=2.5e-05 Score=52.01 Aligned_cols=86 Identities=9% Similarity=0.031 Sum_probs=52.5
Q ss_pred cccc--CChHHHHHHHHHHHHhccCCCceEEEEeeecCCC---------CCCch---------hhh-hhhhhchHh--hh
Q 037161 2 ILHA--WSDEHCLKLLKNCYESINKEDGKLIVVEAVLPEL---------PENSA---------TSK-ANSQIDVFM--LT 58 (99)
Q Consensus 2 vlHd--w~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~---------~~~~~---------~~~-~~~~~dl~m--~~ 58 (99)
++|. .+.++..++|+++++.| +|||++++.....+.. ..... ... ....+.+.+ ..
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~ 220 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHL-RPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSV 220 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTE-EEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSC
T ss_pred hhhhhcCCHHHHHHHHHHHHHhc-CCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhh
Confidence 4666 67788999999999999 9999999876432100 00000 000 000000000 00
Q ss_pred cCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161 59 HSPRGKVRTKHEFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 59 ~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 88 (99)
.......+|.+++.++++++||+++++..+
T Consensus 221 ~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 221 NNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp SSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred cCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 000135678999999999999999998765
No 77
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=97.80 E-value=2.9e-05 Score=51.57 Aligned_cols=65 Identities=17% Similarity=0.041 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 88 (99)
++-.++|+++++.| +|||++++.+..-+ . . + ...-. .. .....|.+++.++|+++||+++++...
T Consensus 174 ~~~~~~l~~i~r~L-KPGG~li~~~~~~~-~---~-~-----~~g~~---~~-~~~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 174 DAYRAALCNLASLL-KPGGHLVTTVTLRL-P---S-Y-----MVGKR---EF-SCVALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp HHHHHHHHHHHTTE-EEEEEEEEEEESSC-C---E-E-----EETTE---EE-ECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHc-CCCcEEEEEEeecC-c---c-c-----eeCCe---Ee-eccccCHHHHHHHHHHCCCEEEEEeec
Confidence 56788999999999 99999999875321 1 0 0 00000 00 112458999999999999999988764
No 78
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=97.80 E-value=2.9e-05 Score=50.90 Aligned_cols=66 Identities=15% Similarity=0.086 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 88 (99)
++..++|+++++.| +|||++++.+..-+ . . .. .-+. .. .....+.+++.++|+++||+++++...
T Consensus 175 ~~~~~~l~~~~~~L-kpgG~li~~~~~~~-~---~-~~----~~~~----~~-~~~~~~~~~~~~~l~~aGf~~~~~~~~ 239 (265)
T 2i62_A 175 PAYRTALRNLGSLL-KPGGFLVMVDALKS-S---Y-YM----IGEQ----KF-SSLPLGWETVRDAVEEAGYTIEQFEVI 239 (265)
T ss_dssp HHHHHHHHHHHTTE-EEEEEEEEEEESSC-C---E-EE----ETTE----EE-ECCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHhhC-CCCcEEEEEecCCC-c---e-EE----cCCc----cc-cccccCHHHHHHHHHHCCCEEEEEEEe
Confidence 36789999999999 99999999884322 1 0 00 0000 00 123467889999999999999998765
Q ss_pred C
Q 037161 89 V 89 (99)
Q Consensus 89 ~ 89 (99)
.
T Consensus 240 ~ 240 (265)
T 2i62_A 240 S 240 (265)
T ss_dssp C
T ss_pred c
Confidence 3
No 79
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=97.76 E-value=6.9e-05 Score=49.88 Aligned_cols=79 Identities=13% Similarity=0.121 Sum_probs=49.7
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHh-h-----hcCCCceecCHHHHHHHH
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFM-L-----THSPRGKVRTKHEFINLA 75 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m-~-----~~~~~g~~rt~~e~~~ll 75 (99)
++|.++| ..++|+++++.| +|||++++.....+. .... ......... . .....-..++.++|.++|
T Consensus 126 ~l~~~~d--~~~~l~~~~~~L-kpgG~l~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 197 (279)
T 3ccf_A 126 MLHWVKE--PEAAIASIHQAL-KSGGRFVAEFGGKGN--IKYI---LEALYNALETLGIHNPQALNPWYFPSIGEYVNIL 197 (279)
T ss_dssp CGGGCSC--HHHHHHHHHHHE-EEEEEEEEEEECTTT--THHH---HHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHH
T ss_pred hhhhCcC--HHHHHHHHHHhc-CCCcEEEEEecCCcc--hHHH---HHHHHHHHHhcCCccccCcCceeCCCHHHHHHHH
Confidence 5777776 458999999999 999999986643221 1110 001111100 0 000012456899999999
Q ss_pred HHcCCCeeEEEEc
Q 037161 76 TAAGFSGIRFQCF 88 (99)
Q Consensus 76 ~~aGf~~~~~~~~ 88 (99)
+++||+++++...
T Consensus 198 ~~aGf~~~~~~~~ 210 (279)
T 3ccf_A 198 EKQGFDVTYAALF 210 (279)
T ss_dssp HHHTEEEEEEEEE
T ss_pred HHcCCEEEEEEEe
Confidence 9999999887654
No 80
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.76 E-value=6.3e-05 Score=48.90 Aligned_cols=77 Identities=14% Similarity=0.003 Sum_probs=49.8
Q ss_pred ccccCChH-HHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 2 ILHAWSDE-HCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 2 vlHdw~d~-~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
|+|+.++. +...+|+++++.| +|||+++|. .........+.. .....+++. +|+++||
T Consensus 147 v~~~~~~~~~~~~~l~~~~~~L-kpgG~l~i~-~~~~~~~~~~~~------------------~~~~~~~l~-~l~~~Gf 205 (230)
T 1fbn_A 147 IYEDVAQPNQAEILIKNAKWFL-KKGGYGMIA-IKARSIDVTKDP------------------KEIFKEQKE-ILEAGGF 205 (230)
T ss_dssp EEECCCSTTHHHHHHHHHHHHE-EEEEEEEEE-EEGGGTCSSSCH------------------HHHHHHHHH-HHHHHTE
T ss_pred EEEecCChhHHHHHHHHHHHhC-CCCcEEEEE-EecCCCCCCCCH------------------HHhhHHHHH-HHHHCCC
Confidence 46776654 4466799999999 999999997 221111111000 001126777 9999999
Q ss_pred CeeEEEEcCCC---eeEEEEEC
Q 037161 81 SGIRFQCFVCN---SWVMEFYK 99 (99)
Q Consensus 81 ~~~~~~~~~~~---~~vie~~k 99 (99)
+.+++..+... +.++.++|
T Consensus 206 ~~~~~~~~~~~~~~~~~v~~~k 227 (230)
T 1fbn_A 206 KIVDEVDIEPFEKDHVMFVGIW 227 (230)
T ss_dssp EEEEEEECTTTSTTEEEEEEEE
T ss_pred EEEEEEccCCCccceEEEEEEe
Confidence 99999887653 66666654
No 81
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.72 E-value=3.6e-05 Score=51.43 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=28.8
Q ss_pred CccccCCh-----HHHHHHHHHHHHhccCCCceEEEEee
Q 037161 1 SILHAWSD-----EHCLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 1 ~vlHdw~d-----~~~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
+++|++++ ++..++|+++++.| +|||++++...
T Consensus 139 ~~l~~~~~~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~ 176 (293)
T 3thr_A 139 NSFAHLPDSKGDQSEHRLALKNIASMV-RPGGLLVIDHR 176 (293)
T ss_dssp TCGGGSCCSSSSSHHHHHHHHHHHHTE-EEEEEEEEEEE
T ss_pred hHHhhcCccccCHHHHHHHHHHHHHHc-CCCeEEEEEeC
Confidence 36788887 88999999999999 99999998764
No 82
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.67 E-value=2.4e-05 Score=52.45 Aligned_cols=64 Identities=9% Similarity=0.092 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161 10 HCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 10 ~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 88 (99)
+-.++|+++++.| +|||++++.+..-. .. .. .-+- .. ....+|.++|.++|+++||+++++...
T Consensus 193 ~~~~~l~~~~r~L-kpGG~l~~~~~~~~-~~----~~----~~~~----~~-~~~~~~~~~l~~~l~~aGf~~~~~~~~ 256 (289)
T 2g72_A 193 SFQRALDHITTLL-RPGGHLLLIGALEE-SW----YL----AGEA----RL-TVVPVSEEEVREALVRSGYKVRDLRTY 256 (289)
T ss_dssp HHHHHHHHHHTTE-EEEEEEEEEEEESC-CE----EE----ETTE----EE-ECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHHhc-CCCCEEEEEEecCc-ce----EE----cCCe----ee-eeccCCHHHHHHHHHHcCCeEEEeeEe
Confidence 6789999999999 99999999864321 10 00 0000 00 123568999999999999999988754
No 83
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=97.67 E-value=0.0001 Score=47.16 Aligned_cols=68 Identities=1% Similarity=-0.098 Sum_probs=48.5
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS 81 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~ 81 (99)
++|..++++..+.++++++.| +|||+++++....+... . .......|.+|+.+++++ ||+
T Consensus 110 ~l~~l~~~~~~~~l~~~~r~L-kpgG~~~l~~~~~~~~~-~-----------------~~~~~~~~~~el~~~~~~-gf~ 169 (203)
T 1pjz_A 110 AMIALPADMRERYVQHLEALM-PQACSGLLITLEYDQAL-L-----------------EGPPFSVPQTWLHRVMSG-NWE 169 (203)
T ss_dssp CGGGSCHHHHHHHHHHHHHHS-CSEEEEEEEEESSCSSS-S-----------------SSCCCCCCHHHHHHTSCS-SEE
T ss_pred chhhCCHHHHHHHHHHHHHHc-CCCcEEEEEEEecCccc-c-----------------CCCCCCCCHHHHHHHhcC-CcE
Confidence 578888888889999999999 99999555543322110 0 001123678999999999 999
Q ss_pred eeEEEEcC
Q 037161 82 GIRFQCFV 89 (99)
Q Consensus 82 ~~~~~~~~ 89 (99)
+..+....
T Consensus 170 i~~~~~~~ 177 (203)
T 1pjz_A 170 VTKVGGQD 177 (203)
T ss_dssp EEEEEESS
T ss_pred EEEecccc
Confidence 88877653
No 84
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.53 E-value=0.00036 Score=43.98 Aligned_cols=69 Identities=9% Similarity=0.036 Sum_probs=49.7
Q ss_pred ccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCee
Q 037161 4 HAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGI 83 (99)
Q Consensus 4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~ 83 (99)
+.++.++..++|+++++.| +|||++++.+....... . ... . .......+|.+++.++|+ ||+++
T Consensus 103 ~~~~~~~~~~~l~~~~~~L-~pgG~l~~~~~~~~~~~----~-----~~~---~-~~~~~~~~~~~~l~~~l~--Gf~v~ 166 (202)
T 2kw5_A 103 CHLPSSLRQQLYPKVYQGL-KPGGVFILEGFAPEQLQ----Y-----NTG---G-PKDLDLLPKLETLQSELP--SLNWL 166 (202)
T ss_dssp CCCCHHHHHHHHHHHHTTC-CSSEEEEEEEECTTTGG----G-----TSC---C-SSSGGGCCCHHHHHHHCS--SSCEE
T ss_pred hcCCHHHHHHHHHHHHHhc-CCCcEEEEEEecccccc----C-----CCC---C-CCcceeecCHHHHHHHhc--CceEE
Confidence 4567788999999999999 99999999886533210 0 000 0 001245789999999999 99999
Q ss_pred EEEEc
Q 037161 84 RFQCF 88 (99)
Q Consensus 84 ~~~~~ 88 (99)
++...
T Consensus 167 ~~~~~ 171 (202)
T 2kw5_A 167 IANNL 171 (202)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88654
No 85
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.51 E-value=0.00012 Score=46.47 Aligned_cols=65 Identities=14% Similarity=-0.070 Sum_probs=50.6
Q ss_pred cCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeE
Q 037161 5 AWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIR 84 (99)
Q Consensus 5 dw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~ 84 (99)
+..-+....+|+++++.| +|||++++.+.... +.+++.++++++||+.++
T Consensus 132 ~~~~~~~~~~l~~~~~~L-~~gG~l~~~~~~~~-----------------------------~~~~~~~~~~~~Gf~~~~ 181 (205)
T 3grz_A 132 NILAEILLDLIPQLDSHL-NEDGQVIFSGIDYL-----------------------------QLPKIEQALAENSFQIDL 181 (205)
T ss_dssp ESCHHHHHHHGGGSGGGE-EEEEEEEEEEEEGG-----------------------------GHHHHHHHHHHTTEEEEE
T ss_pred CCcHHHHHHHHHHHHHhc-CCCCEEEEEecCcc-----------------------------cHHHHHHHHHHcCCceEE
Confidence 344455678899999999 99999998554321 367899999999999999
Q ss_pred EEEcCCCeeEEEEEC
Q 037161 85 FQCFVCNSWVMEFYK 99 (99)
Q Consensus 85 ~~~~~~~~~vie~~k 99 (99)
+...+...+++.-.|
T Consensus 182 ~~~~~~w~~~~~~~~ 196 (205)
T 3grz_A 182 KMRAGRWIGLAISRK 196 (205)
T ss_dssp EEEETTEEEEEEEEC
T ss_pred eeccCCEEEEEEecc
Confidence 988877788877654
No 86
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=97.49 E-value=0.00016 Score=47.28 Aligned_cols=76 Identities=12% Similarity=0.103 Sum_probs=45.8
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhch--Hhhhc----CCCceecCHHHHHHHH
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDV--FMLTH----SPRGKVRTKHEFINLA 75 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl--~m~~~----~~~g~~rt~~e~~~ll 75 (99)
++|..+| ..++|+++++.| +|||++++....... .+........... ..-.. ......++.++|.++|
T Consensus 104 ~l~~~~~--~~~~l~~~~~~L-~pgG~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 177 (259)
T 2p35_A 104 VFQWVPD--HLAVLSQLMDQL-ESGGVLAVQMPDNLQ---EPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNAL 177 (259)
T ss_dssp CGGGSTT--HHHHHHHHGGGE-EEEEEEEEEEECCTT---SHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHH
T ss_pred chhhCCC--HHHHHHHHHHhc-CCCeEEEEEeCCCCC---cHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHH
Confidence 5777766 668999999999 999999998752211 1100000000000 00000 0134568999999999
Q ss_pred HHcCCCee
Q 037161 76 TAAGFSGI 83 (99)
Q Consensus 76 ~~aGf~~~ 83 (99)
+++||++.
T Consensus 178 ~~aGf~v~ 185 (259)
T 2p35_A 178 SPKSSRVD 185 (259)
T ss_dssp GGGEEEEE
T ss_pred HhcCCceE
Confidence 99999743
No 87
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=97.38 E-value=3e-05 Score=52.37 Aligned_cols=75 Identities=16% Similarity=0.290 Sum_probs=45.8
Q ss_pred cCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHH--cCCCe
Q 037161 5 AWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATA--AGFSG 82 (99)
Q Consensus 5 dw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~--aGf~~ 82 (99)
+|+++...++|+++++.| +|||++++-...... +.+...+ .-.+.... .......++|.++|.+ +||+.
T Consensus 193 ~~~~~~~~~~l~~~~~~L-kpGG~lil~~~~~~~------y~~~~~~-~~~~~~~~-~~~~~~p~~~~~~L~~~~~GF~~ 263 (292)
T 3g07_A 193 NWGDEGLKRMFRRIYRHL-RPGGILVLEPQPWSS------YGKRKTL-TETIYKNY-YRIQLKPEQFSSYLTSPDVGFSS 263 (292)
T ss_dssp HHHHHHHHHHHHHHHHHE-EEEEEEEEECCCHHH------HHTTTTS-CHHHHHHH-HHCCCCGGGHHHHHTSTTTCCCE
T ss_pred cCCHHHHHHHHHHHHHHh-CCCcEEEEecCCchh------hhhhhcc-cHHHHhhh-hcEEEcHHHHHHHHHhcCCCceE
Confidence 568899999999999999 999988874321110 0000000 00000011 2233346899999999 99998
Q ss_pred eEEEEc
Q 037161 83 IRFQCF 88 (99)
Q Consensus 83 ~~~~~~ 88 (99)
+++...
T Consensus 264 ~~~~~~ 269 (292)
T 3g07_A 264 YELVAT 269 (292)
T ss_dssp EEEC--
T ss_pred EEEecc
Confidence 887654
No 88
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.17 E-value=0.0016 Score=42.32 Aligned_cols=28 Identities=25% Similarity=0.424 Sum_probs=24.6
Q ss_pred cccCChHHHHHHHHHHHHhccCCCceEEE
Q 037161 3 LHAWSDEHCLKLLKNCYESINKEDGKLIV 31 (99)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I 31 (99)
+|.+++++..++|+++++.| +|||.+++
T Consensus 116 ~~~~~~~~~~~~l~~~~~~L-~pgG~li~ 143 (252)
T 1wzn_A 116 IMYFDEEDLRKLFSKVAEAL-KPGGVFIT 143 (252)
T ss_dssp GGGSCHHHHHHHHHHHHHHE-EEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHHc-CCCeEEEE
Confidence 56677888999999999999 99998876
No 89
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=96.95 E-value=0.00096 Score=45.45 Aligned_cols=86 Identities=16% Similarity=0.189 Sum_probs=48.5
Q ss_pred cccc-CChHHHHHHHHHHHHhccCCCceEEEEeeecCC---C-C--------CCchhhhhhhh----hchHh-hhcC---
Q 037161 2 ILHA-WSDEHCLKLLKNCYESINKEDGKLIVVEAVLPE---L-P--------ENSATSKANSQ----IDVFM-LTHS--- 60 (99)
Q Consensus 2 vlHd-w~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~---~-~--------~~~~~~~~~~~----~dl~m-~~~~--- 60 (99)
++|. |++++..++|+++++.| +|||.+++...-.+. . . .......+... .+-.. +...
T Consensus 138 ~lhy~~~~~~~~~~l~~~~r~L-kpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (302)
T 2vdw_A 138 AIHYSFHPRHYATVMNNLSELT-ASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDRIVVYNPSTMS 216 (302)
T ss_dssp CGGGTCSTTTHHHHHHHHHHHE-EEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTEEEEBCTTTBS
T ss_pred hHHHhCCHHHHHHHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccccccceeeccccC
Confidence 4564 55556689999999999 999999876542110 0 0 00000000000 00000 0000
Q ss_pred CCc--eecCHHHHHHHHHHcCCCeeEEEEc
Q 037161 61 PRG--KVRTKHEFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 61 ~~g--~~rt~~e~~~ll~~aGf~~~~~~~~ 88 (99)
..- .-.+.+++.++++++||+++.....
T Consensus 217 ~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f 246 (302)
T 2vdw_A 217 TPMTEYIIKKNDIVRVFNEYGFVLVDNVDF 246 (302)
T ss_dssp SCEEEECCCHHHHHHHHHHTTEEEEEEEEH
T ss_pred CCceeeeeEHHHHHHHHHHCCCEEEEecCh
Confidence 011 2467899999999999999988754
No 90
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=96.93 E-value=0.005 Score=40.62 Aligned_cols=64 Identities=11% Similarity=0.065 Sum_probs=47.1
Q ss_pred cCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeE
Q 037161 5 AWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIR 84 (99)
Q Consensus 5 dw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~ 84 (99)
+...+....+++++++.| +|||++++.+...+ +.+++.++++++||++++
T Consensus 191 n~~~~~~~~~l~~~~~~L-kpgG~lils~~~~~-----------------------------~~~~v~~~l~~~Gf~~~~ 240 (254)
T 2nxc_A 191 NLYAELHAALAPRYREAL-VPGGRALLTGILKD-----------------------------RAPLVREAMAGAGFRPLE 240 (254)
T ss_dssp ECCHHHHHHHHHHHHHHE-EEEEEEEEEEEEGG-----------------------------GHHHHHHHHHHTTCEEEE
T ss_pred CCcHHHHHHHHHHHHHHc-CCCCEEEEEeeccC-----------------------------CHHHHHHHHHHCCCEEEE
Confidence 334455678999999999 99999998654321 267899999999999999
Q ss_pred EEEcCCCeeEEEEEC
Q 037161 85 FQCFVCNSWVMEFYK 99 (99)
Q Consensus 85 ~~~~~~~~~vie~~k 99 (99)
+...+... .+.++|
T Consensus 241 ~~~~~~W~-~l~~~k 254 (254)
T 2nxc_A 241 EAAEGEWV-LLAYGR 254 (254)
T ss_dssp EEEETTEE-EEEEEC
T ss_pred EeccCCeE-EEEEEC
Confidence 87765443 344544
No 91
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=96.90 E-value=0.0014 Score=43.64 Aligned_cols=66 Identities=14% Similarity=0.161 Sum_probs=48.7
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS 81 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~ 81 (99)
++|.++++...++|+++++.| +|||.++|+.....+....+ ......++.+++.++++. |+
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~L-kpgG~l~i~~~~~~~~~~~~----------------~~~~~~~~~~~l~~~~~~--~~ 253 (286)
T 3m70_A 193 VFMFLNRERVPSIIKNMKEHT-NVGGYNLIVAAMSTDDVPCP----------------LPFSFTFAENELKEYYKD--WE 253 (286)
T ss_dssp SGGGSCGGGHHHHHHHHHHTE-EEEEEEEEEEEBCCSSSCCS----------------SCCSCCBCTTHHHHHTTT--SE
T ss_pred chhhCCHHHHHHHHHHHHHhc-CCCcEEEEEEecCCCCCCCC----------------CCccccCCHHHHHHHhcC--CE
Confidence 688889999999999999999 99999888776544332110 012345667788888865 88
Q ss_pred eeEEE
Q 037161 82 GIRFQ 86 (99)
Q Consensus 82 ~~~~~ 86 (99)
++...
T Consensus 254 ~~~~~ 258 (286)
T 3m70_A 254 FLEYN 258 (286)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87764
No 92
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=96.84 E-value=0.0017 Score=41.14 Aligned_cols=74 Identities=9% Similarity=0.023 Sum_probs=44.8
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
+++|+++| ..++|+++++.| +|||++++.+.... .. ...........-.......+.+|.+++.++|+ |
T Consensus 103 ~~l~~~~~--~~~~l~~~~~~L-~pgG~l~i~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G- 171 (211)
T 2gs9_A 103 TTLEFVED--VERVLLEARRVL-RPGGALVVGVLEAL----SP-WAALYRRLGEKGVLPWAQARFLAREDLKALLG--P- 171 (211)
T ss_dssp SCTTTCSC--HHHHHHHHHHHE-EEEEEEEEEEECTT----SH-HHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S-
T ss_pred ChhhhcCC--HHHHHHHHHHHc-CCCCEEEEEecCCc----Cc-HHHHHHHHhhccCccccccccCCHHHHHHHhc--C-
Confidence 36788876 568999999999 99999999875322 11 10000000000000001356789999999999 7
Q ss_pred CeeEEE
Q 037161 81 SGIRFQ 86 (99)
Q Consensus 81 ~~~~~~ 86 (99)
.+++.
T Consensus 172 -~~~~~ 176 (211)
T 2gs9_A 172 -PEAEG 176 (211)
T ss_dssp -CSEEE
T ss_pred -cceeE
Confidence 44443
No 93
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=96.82 E-value=0.0033 Score=41.71 Aligned_cols=67 Identities=9% Similarity=-0.063 Sum_probs=48.0
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS 81 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~ 81 (99)
+||..++++..++++++++.| +|||+++++....+..... . .....|.+|+.++|+. +|+
T Consensus 161 ~l~~l~~~~~~~~l~~~~~~L-kpGG~l~l~~~~~~~~~~~-----------------g-~~~~~~~~el~~~l~~-~f~ 220 (252)
T 2gb4_A 161 ALVAINPGDHDRYADIILSLL-RKEFQYLVAVLSYDPTKHA-----------------G-PPFYVPSAELKRLFGT-KCS 220 (252)
T ss_dssp STTTSCGGGHHHHHHHHHHTE-EEEEEEEEEEEECCTTSCC-----------------C-SSCCCCHHHHHHHHTT-TEE
T ss_pred hhhhCCHHHHHHHHHHHHHHc-CCCeEEEEEEEecCCccCC-----------------C-CCCCCCHHHHHHHhhC-CeE
Confidence 567778888889999999999 9999998765543321000 0 0112578999999988 599
Q ss_pred eeEEEEc
Q 037161 82 GIRFQCF 88 (99)
Q Consensus 82 ~~~~~~~ 88 (99)
++.+...
T Consensus 221 v~~~~~~ 227 (252)
T 2gb4_A 221 MQCLEEV 227 (252)
T ss_dssp EEEEEEE
T ss_pred EEEEecc
Confidence 9887643
No 94
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=96.75 E-value=0.002 Score=42.66 Aligned_cols=60 Identities=7% Similarity=-0.004 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEcC
Q 037161 10 HCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFV 89 (99)
Q Consensus 10 ~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 89 (99)
+...++++++++| +|||+++|....-..+...+ .....++-.+.|+++||++++...+.
T Consensus 160 ~~~~~l~~~~r~L-KpGG~lvI~ik~r~~d~~~p--------------------~~~~~~~ev~~L~~~GF~l~e~i~L~ 218 (233)
T 4df3_A 160 QAAIVVRNARFFL-RDGGYMLMAIKARSIDVTTE--------------------PSEVYKREIKTLMDGGLEIKDVVHLD 218 (233)
T ss_dssp HHHHHHHHHHHHE-EEEEEEEEEEECCHHHHHTC--------------------CCHHHHHHHHHHHHTTCCEEEEEECT
T ss_pred hHHHHHHHHHHhc-cCCCEEEEEEecccCCCCCC--------------------hHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 4678899999999 99999998653211110000 00112344567899999999998875
Q ss_pred C
Q 037161 90 C 90 (99)
Q Consensus 90 ~ 90 (99)
+
T Consensus 219 p 219 (233)
T 4df3_A 219 P 219 (233)
T ss_dssp T
T ss_pred C
Confidence 4
No 95
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=96.56 E-value=0.01 Score=39.35 Aligned_cols=60 Identities=10% Similarity=0.089 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEE-
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQC- 87 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~- 87 (99)
+...++++++++.| +|||.+++.. + ..+.+++.++++++||+.+++.+
T Consensus 215 ~~~~~~l~~~~~~L-kpgG~l~~~~--------~----------------------~~~~~~~~~~l~~~Gf~~v~~~~d 263 (276)
T 2b3t_A 215 ADIVHIIEQSRNAL-VSGGFLLLEH--------G----------------------WQQGEAVRQAFILAGYHDVETCRD 263 (276)
T ss_dssp HHHHHHHHHHGGGE-EEEEEEEEEC--------C----------------------SSCHHHHHHHHHHTTCTTCCEEEC
T ss_pred HHHHHHHHHHHHhc-CCCCEEEEEE--------C----------------------chHHHHHHHHHHHCCCcEEEEEec
Confidence 45688999999999 9999888741 0 11367899999999999888775
Q ss_pred cCCCeeEEEEEC
Q 037161 88 FVCNSWVMEFYK 99 (99)
Q Consensus 88 ~~~~~~vie~~k 99 (99)
..+...++.+++
T Consensus 264 ~~g~~r~~~~~~ 275 (276)
T 2b3t_A 264 YGDNERVTLGRY 275 (276)
T ss_dssp TTSSEEEEEEEC
T ss_pred CCCCCcEEEEEE
Confidence 445556666653
No 96
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=96.52 E-value=0.0054 Score=39.33 Aligned_cols=76 Identities=12% Similarity=0.031 Sum_probs=46.3
Q ss_pred ccccCCh-HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 2 ILHAWSD-EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 2 vlHdw~d-~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
|++|.+. +....+++++++.| +|||++++. .........+ .....+.+++.++ +++ |
T Consensus 147 v~~~~~~~~~~~~~l~~~~~~L-kpgG~l~~~-~~~~~~~~~~------------------~~~~~~~~~l~~l-~~~-f 204 (227)
T 1g8a_A 147 IFEDVAQPTQAKILIDNAEVYL-KRGGYGMIA-VKSRSIDVTK------------------EPEQVFREVEREL-SEY-F 204 (227)
T ss_dssp EEECCCSTTHHHHHHHHHHHHE-EEEEEEEEE-EEGGGTCTTS------------------CHHHHHHHHHHHH-HTT-S
T ss_pred EEECCCCHhHHHHHHHHHHHhc-CCCCEEEEE-EecCCCCCCC------------------ChhhhhHHHHHHH-Hhh-c
Confidence 3444433 33445699999999 999999998 3221111110 0012235677777 777 9
Q ss_pred CeeEEEEcCCC---eeEEEEEC
Q 037161 81 SGIRFQCFVCN---SWVMEFYK 99 (99)
Q Consensus 81 ~~~~~~~~~~~---~~vie~~k 99 (99)
++++...+... +.++.++|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 205 EVIERLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp EEEEEEECTTTSSSEEEEEEEC
T ss_pred eeeeEeccCcccCCCEEEEEEe
Confidence 99998887543 56666654
No 97
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=96.45 E-value=0.0015 Score=42.58 Aligned_cols=68 Identities=10% Similarity=0.061 Sum_probs=38.4
Q ss_pred HHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEcC
Q 037161 12 LKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFV 89 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 89 (99)
..+|+++++.| +|||++++...+-+. ...... ...+. ... .......+|+.++++++||++..+..++
T Consensus 119 ~~~l~~~~r~L-kpGG~l~i~~~~~~~-~~~~~~----~~~~~---~~~-~~~~~~~~el~~~l~~aGf~v~~~~~~~ 186 (225)
T 3p2e_A 119 RDILSNVADLA-KKEAHFEFVTTYSDS-YEEAEI----KKRGL---PLL-SKAYFLSEQYKAELSNSGFRIDDVKELD 186 (225)
T ss_dssp HHHHHHHHTTE-EEEEEEEEEECCCC----------------------C-CHHHHHSHHHHHHHHHHTCEEEEEEEEC
T ss_pred HHHHHHHHHhc-CCCcEEEEEEecccc-chhchh----hhcCC---CCC-ChhhcchHHHHHHHHHcCCCeeeeeecC
Confidence 35899999999 999999995433222 111000 00010 000 1111112359999999999999887654
No 98
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=96.29 E-value=0.0088 Score=37.70 Aligned_cols=51 Identities=12% Similarity=0.209 Sum_probs=36.6
Q ss_pred ccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCee
Q 037161 4 HAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGI 83 (99)
Q Consensus 4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~ 83 (99)
.+.+..+..++|+++++.| +|||++++.....+ +.+++.++++++|| .+
T Consensus 114 ~~~~~~~~~~~l~~~~~~L-kpgG~l~~~~~~~~-----------------------------~~~~~~~~l~~~g~-~~ 162 (204)
T 3e05_A 114 IGGSGGMLEEIIDAVDRRL-KSEGVIVLNAVTLD-----------------------------TLTKAVEFLEDHGY-MV 162 (204)
T ss_dssp ESCCTTCHHHHHHHHHHHC-CTTCEEEEEECBHH-----------------------------HHHHHHHHHHHTTC-EE
T ss_pred ECCCCcCHHHHHHHHHHhc-CCCeEEEEEecccc-----------------------------cHHHHHHHHHHCCC-ce
Confidence 3444445778999999999 99999998543211 35678888999998 44
Q ss_pred EE
Q 037161 84 RF 85 (99)
Q Consensus 84 ~~ 85 (99)
++
T Consensus 163 ~~ 164 (204)
T 3e05_A 163 EV 164 (204)
T ss_dssp EE
T ss_pred eE
Confidence 44
No 99
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=96.29 E-value=0.0047 Score=39.87 Aligned_cols=69 Identities=9% Similarity=-0.004 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHHHhccCCCceEEEEeeecCC-CCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEE
Q 037161 8 DEHCLKLLKNCYESINKEDGKLIVVEAVLPE-LPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQ 86 (99)
Q Consensus 8 d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~-~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~ 86 (99)
.++...+++++++.| +|||++++ +..... ....+. ..+-..+ .++|+++||+++++.
T Consensus 158 ~~~~~~~~~~~~~~L-kpgG~l~i-~~~~~~~~~~~~~-------------------~~~~~~~-~~~l~~~Gf~~~~~~ 215 (233)
T 2ipx_A 158 PDQTRIVALNAHTFL-RNGGHFVI-SIKANCIDSTASA-------------------EAVFASE-VKKMQQENMKPQEQL 215 (233)
T ss_dssp TTHHHHHHHHHHHHE-EEEEEEEE-EEEHHHHCSSSCH-------------------HHHHHHH-HHTTGGGTEEEEEEE
T ss_pred ccHHHHHHHHHHHHc-CCCeEEEE-EEcccccccCCCH-------------------HHHHHHH-HHHHHHCCCceEEEE
Confidence 345677899999999 99999998 332210 100000 0001123 689999999999987
Q ss_pred EcCC---CeeEEEEE
Q 037161 87 CFVC---NSWVMEFY 98 (99)
Q Consensus 87 ~~~~---~~~vie~~ 98 (99)
.+.. .+.++.++
T Consensus 216 ~~~~~~~~~~~v~~~ 230 (233)
T 2ipx_A 216 TLEPYERDHAVVVGV 230 (233)
T ss_dssp ECTTTSSSEEEEEEE
T ss_pred ecCCccCCcEEEEEE
Confidence 7653 35565554
No 100
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=96.13 E-value=0.0057 Score=38.93 Aligned_cols=66 Identities=9% Similarity=0.022 Sum_probs=41.0
Q ss_pred HHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEcC
Q 037161 12 LKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFV 89 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 89 (99)
..+|+++++.| +|||++++.-....-....+ .+.-. ......+..+++..+++++||++.++..+.
T Consensus 120 ~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~~---------~~~~~--~~~~~~~~~~~l~~~l~~aGf~i~~~~~~~ 185 (218)
T 3mq2_A 120 PEMLRGMAAVC-RPGASFLVALNLHAWRPSVP---------EVGEH--PEPTPDSADEWLAPRYAEAGWKLADCRYLE 185 (218)
T ss_dssp SHHHHHHHHTE-EEEEEEEEEEEGGGBTTBCG---------GGTTC--CCCCHHHHHHHHHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHHHc-CCCcEEEEEecccccccccc---------ccccC--CccchHHHHHHHHHHHHHcCCCceeeeccc
Confidence 68899999999 99999998432211111000 11000 112233345568999999999999887653
No 101
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=96.06 E-value=0.0029 Score=41.49 Aligned_cols=68 Identities=19% Similarity=0.263 Sum_probs=40.8
Q ss_pred HHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161 12 LKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 88 (99)
.++|+++++.| +|||++++.- -|..... ....+-.-.........++.+++.++++++||++..+...
T Consensus 117 ~~~l~~i~rvL-kpgG~lv~~~--~p~~e~~------~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~ 184 (232)
T 3opn_A 117 DLILPPLYEIL-EKNGEVAALI--KPQFEAG------REQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFS 184 (232)
T ss_dssp GGTHHHHHHHS-CTTCEEEEEE--CHHHHSC------HHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred HHHHHHHHHhc-cCCCEEEEEE--CcccccC------HHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEc
Confidence 57899999999 9999999842 1100000 0000000000000112347889999999999999988754
No 102
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=95.95 E-value=0.0029 Score=40.98 Aligned_cols=64 Identities=11% Similarity=0.126 Sum_probs=39.9
Q ss_pred cccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCe
Q 037161 3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSG 82 (99)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~ 82 (99)
.+++..+.-..+|+++++.| +|||++++.+...... ... ...........+++...+.++||+.
T Consensus 141 ~~~~~~~~~~~~l~~~~r~L-kpgG~l~~~~~~~~~~-----------~~~----~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 141 EETWHTHQFNFIKNHAFRLL-KPGGVLTYCNLTSWGE-----------LMK----SKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp GGGTTTHHHHHHHHTHHHHE-EEEEEEEECCHHHHHH-----------HTT----TTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred hhhhhhhhHHHHHHHHHHhc-CCCeEEEEEecCcHHH-----------hhc----hhhhhhhhhccHHHHHHHHHCCCCC
Confidence 45666666678999999999 9999999877531100 000 0000112222356677899999995
No 103
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=95.94 E-value=0.018 Score=40.02 Aligned_cols=78 Identities=15% Similarity=0.062 Sum_probs=51.5
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhc---CCC-ceecCHHHHHHHHHH
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTH---SPR-GKVRTKHEFINLATA 77 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~---~~~-g~~rt~~e~~~ll~~ 77 (99)
+|...+.+++.++|+.+.+.. |+|.++++|.+-++++ .++ .+.. ++-.. ..+ ....|.++..++|.+
T Consensus 200 vL~YL~~~~~~~ll~~ia~~f--~~~~~i~yE~i~p~d~----fg~--~M~~-~l~~~g~pl~sl~~y~t~~~~~~r~~~ 270 (334)
T 3iei_A 200 VLVYMTPEQSANLLKWAANSF--ERAMFINYEQVNMGDR----FGQ--IMIE-NLRRRQCDLAGVETCKSLESQKERLLS 270 (334)
T ss_dssp CGGGSCHHHHHHHHHHHHHHC--SSEEEEEEEECCTTSH----HHH--HHHH-HHHTTTCCCTTGGGGGCHHHHHHHHHT
T ss_pred hhhCCCHHHHHHHHHHHHHhC--CCceEEEEeccCCCCH----HHH--HHHH-HHHHhCCCCcccccCCCHHHHHHHHHH
Confidence 677889999999999999976 5577778899855431 111 1111 11000 001 134577899999999
Q ss_pred cCCCeeEEEEc
Q 037161 78 AGFSGIRFQCF 88 (99)
Q Consensus 78 aGf~~~~~~~~ 88 (99)
+||+.+++...
T Consensus 271 ~Gw~~~~~~d~ 281 (334)
T 3iei_A 271 NGWETASAVDM 281 (334)
T ss_dssp TTCSEEEEEEH
T ss_pred cCCCcceeecH
Confidence 99999877654
No 104
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=95.86 E-value=0.0099 Score=40.05 Aligned_cols=85 Identities=15% Similarity=0.060 Sum_probs=49.3
Q ss_pred ccccC--ChHHHHHHHHHHHHhccCCCceEEEEeeecCC-------CCCCchhhh-----hhhhhch---------Hh--
Q 037161 2 ILHAW--SDEHCLKLLKNCYESINKEDGKLIVVEAVLPE-------LPENSATSK-----ANSQIDV---------FM-- 56 (99)
Q Consensus 2 vlHdw--~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~-------~~~~~~~~~-----~~~~~dl---------~m-- 56 (99)
++|.. +.++...+|+++++.| +|||.+++...-.+. ......... +...-++ .+
T Consensus 123 ~l~~~~~~~~~~~~~l~~~~~~L-kpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~ 201 (313)
T 3bgv_A 123 VCHYSFESYEQADMMLRNACERL-SPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEG 201 (313)
T ss_dssp CGGGGGGSHHHHHHHHHHHHTTE-EEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC-
T ss_pred chhhccCCHHHHHHHHHHHHHHh-CCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEECC
Confidence 45554 4466889999999999 999999987652210 000000000 0000000 00
Q ss_pred hhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161 57 LTHSPRGKVRTKHEFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 57 ~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 88 (99)
.+.. .....+.+++.++++++||+++....+
T Consensus 202 ~~~~-~~~~~~~~~~~~l~~~~G~~~v~~~~f 232 (313)
T 3bgv_A 202 VVDV-PEFLVYFPLLNEMAKKYNMKLVYKKTF 232 (313)
T ss_dssp --CC-EEECCCHHHHHHHGGGGTEEEEEEEEH
T ss_pred cccC-cceEEcHHHHHHHHHHcCcEEEEecCH
Confidence 0001 123467899999999999999988764
No 105
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.72 E-value=0.036 Score=38.39 Aligned_cols=76 Identities=13% Similarity=0.106 Sum_probs=49.7
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHh---hhcCCCceecCHHHHHHHHHHc
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFM---LTHSPRGKVRTKHEFINLATAA 78 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m---~~~~~~g~~rt~~e~~~ll~~a 78 (99)
+|+..+.+++.++|+.+.+.. |+|.++++|.+.+..+..+. ++. ....+.- .....-....|.++..+.|.++
T Consensus 203 vL~YL~~~~~~~ll~~ia~~~--~~~~~v~~e~i~~~~~~~~f-g~~-m~~~l~~~rg~~l~~~~~y~s~~~~~~rl~~~ 278 (334)
T 1rjd_A 203 LLCYMHNNESQLLINTIMSKF--SHGLWISYDPIGGSQPNDRF-GAI-MQSNLKESRNLEMPTLMTYNSKEKYASRWSAA 278 (334)
T ss_dssp CGGGSCHHHHHHHHHHHHHHC--SSEEEEEEEECCCCSTTCCH-HHH-HHHHHHHHHCCCCTTTTTTCSHHHHHGGGTTS
T ss_pred hhhCCCHHHHHHHHHHHHhhC--CCcEEEEEeccCCCCCcchH-HHH-HHHHhhcccCCcccccccCCCHHHHHHHHHHC
Confidence 688899999999999999876 67888899998774332221 110 0001100 0001012446889999999999
Q ss_pred CCC
Q 037161 79 GFS 81 (99)
Q Consensus 79 Gf~ 81 (99)
||+
T Consensus 279 Gf~ 281 (334)
T 1rjd_A 279 PNV 281 (334)
T ss_dssp SEE
T ss_pred CCC
Confidence 997
No 106
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=95.68 E-value=0.0049 Score=41.59 Aligned_cols=30 Identities=17% Similarity=0.302 Sum_probs=28.0
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEE
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIV 31 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I 31 (99)
|||+.++++.-.+++++++++| +|||.+++
T Consensus 221 nvliyf~~~~~~~vl~~~~~~L-~pgG~L~l 250 (274)
T 1af7_A 221 NVMIYFDKTTQEDILRRFVPLL-KPDGLLFA 250 (274)
T ss_dssp SSGGGSCHHHHHHHHHHHGGGE-EEEEEEEE
T ss_pred CchHhCCHHHHHHHHHHHHHHh-CCCcEEEE
Confidence 6899999999999999999999 99999887
No 107
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=95.55 E-value=0.011 Score=39.56 Aligned_cols=30 Identities=17% Similarity=0.386 Sum_probs=25.1
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAV 35 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~ 35 (99)
++|.. +..++|+++++.| +|||.+++.+..
T Consensus 122 ~l~~~---~~~~~l~~~~~~L-kpgG~l~i~~~~ 151 (299)
T 3g5t_A 122 CAHWF---DFEKFQRSAYANL-RKDGTIAIWGYA 151 (299)
T ss_dssp CGGGS---CHHHHHHHHHHHE-EEEEEEEEEEEE
T ss_pred HHHHh---CHHHHHHHHHHhc-CCCcEEEEEecC
Confidence 56777 4679999999999 999999996654
No 108
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=95.49 E-value=0.0093 Score=37.74 Aligned_cols=33 Identities=18% Similarity=0.250 Sum_probs=27.9
Q ss_pred CccccCCh-HHHHHHHHHHHHhccCCCceEEEEee
Q 037161 1 SILHAWSD-EHCLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 1 ~vlHdw~d-~~~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
+++|++++ +...++|+++++.| +|||.+++...
T Consensus 122 ~~l~~~~~~~~~~~~l~~~~~~L-~pgG~l~~~~~ 155 (216)
T 3ofk_A 122 EVLYYLEDMTQMRTAIDNMVKML-APGGHLVFGSA 155 (216)
T ss_dssp SCGGGSSSHHHHHHHHHHHHHTE-EEEEEEEEEEE
T ss_pred cHHHhCCCHHHHHHHHHHHHHHc-CCCCEEEEEec
Confidence 36888886 56779999999999 99999998665
No 109
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=95.45 E-value=0.027 Score=37.11 Aligned_cols=76 Identities=13% Similarity=0.081 Sum_probs=42.5
Q ss_pred ccccCChHHHHH-HHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCC
Q 037161 2 ILHAWSDEHCLK-LLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGF 80 (99)
Q Consensus 2 vlHdw~d~~~~~-iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf 80 (99)
|+.|.+..+-.+ +++++++.| +|||++++.-. ... .|... ... -..++-...|+++||
T Consensus 150 I~~d~a~~~~~~il~~~~~~~L-kpGG~lvisik---~~~-----------~d~t~-----~~~-e~~~~~~~~L~~~gf 208 (232)
T 3id6_C 150 LYVDIAQPDQTDIAIYNAKFFL-KVNGDMLLVIK---ARS-----------IDVTK-----DPK-EIYKTEVEKLENSNF 208 (232)
T ss_dssp EEECCCCTTHHHHHHHHHHHHE-EEEEEEEEEEC---------------------C-----CSS-SSTTHHHHHHHHTTE
T ss_pred EEecCCChhHHHHHHHHHHHhC-CCCeEEEEEEc---cCC-----------cccCC-----CHH-HHHHHHHHHHHHCCC
Confidence 345554433444 445666699 99999999721 110 11100 001 112345567778999
Q ss_pred CeeEEEEcCC---CeeEEEEE
Q 037161 81 SGIRFQCFVC---NSWVMEFY 98 (99)
Q Consensus 81 ~~~~~~~~~~---~~~vie~~ 98 (99)
++.+...+.+ .+.++.++
T Consensus 209 ~~~~~~~l~p~~~~h~~v~~~ 229 (232)
T 3id6_C 209 ETIQIINLDPYDKDHAIVLSK 229 (232)
T ss_dssp EEEEEEECTTTCSSCEEEEEE
T ss_pred EEEEEeccCCCcCceEEEEEE
Confidence 9999988753 46666554
No 110
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=95.16 E-value=0.024 Score=34.76 Aligned_cols=63 Identities=14% Similarity=0.173 Sum_probs=45.3
Q ss_pred CChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEE
Q 037161 6 WSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRF 85 (99)
Q Consensus 6 w~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~ 85 (99)
|+.+....+|+++++.| +|||++++....... ..++.+++++. |..+++
T Consensus 131 ~~~~~~~~~l~~~~~~L-~~gG~l~~~~~~~~~-----------------------------~~~~~~~l~~~-~~~~~~ 179 (194)
T 1dus_A 131 AGKEVLHRIIEEGKELL-KDNGEIWVVIQTKQG-----------------------------AKSLAKYMKDV-FGNVET 179 (194)
T ss_dssp TCHHHHHHHHHHHHHHE-EEEEEEEEEEESTHH-----------------------------HHHHHHHHHHH-HSCCEE
T ss_pred cchhHHHHHHHHHHHHc-CCCCEEEEEECCCCC-----------------------------hHHHHHHHHHH-hcceEE
Confidence 34677889999999999 999999987643110 12566777777 667777
Q ss_pred EEcCCCeeEEEEEC
Q 037161 86 QCFVCNSWVMEFYK 99 (99)
Q Consensus 86 ~~~~~~~~vie~~k 99 (99)
......+.++.++|
T Consensus 180 ~~~~~~~~~~~~~k 193 (194)
T 1dus_A 180 VTIKGGYRVLKSKK 193 (194)
T ss_dssp EEEETTEEEEEEEC
T ss_pred EecCCcEEEEEEee
Confidence 77666777777765
No 111
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=95.12 E-value=0.06 Score=36.45 Aligned_cols=51 Identities=12% Similarity=0.217 Sum_probs=38.2
Q ss_pred HHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161 12 LKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 88 (99)
.+++++++++| +|||.+++... . + .. ...+..++.+.++++||..+++...
T Consensus 190 ~~~l~~~~~~L-kpgG~lv~~~~----~--~--------~~-----------~~~~~~~~~~~l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 190 EAFYKDVLRIL-KPDGICCNQGE----S--I--------WL-----------DLELIEKMSRFIRETGFASVQYALM 240 (304)
T ss_dssp HHHHHHHHHHE-EEEEEEEEEEC----C--T--------TT-----------CHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHHhc-CCCcEEEEecC----C--c--------cc-----------chHHHHHHHHHHHhCCCCcEEEEEe
Confidence 68999999999 99999988621 1 0 00 1124678999999999999988754
No 112
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=95.11 E-value=0.0043 Score=40.47 Aligned_cols=63 Identities=11% Similarity=0.045 Sum_probs=38.4
Q ss_pred ChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEE
Q 037161 7 SDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRF 85 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~ 85 (99)
.-.+...+++++++.| +|||+++.++......... ..++ +-.....+.+...|.++||++..+
T Consensus 145 ~~~~~~~~~~e~~rvL-kPGG~l~f~~~~~~~~~~~-------~~~~--------~~~~~~~~~~~~~L~eaGF~~~~i 207 (236)
T 3orh_A 145 HTHQFNFIKNHAFRLL-KPGGVLTYCNLTSWGELMK-------SKYS--------DITIMFEETQVPALLEAGFRRENI 207 (236)
T ss_dssp TTHHHHHHHHTHHHHE-EEEEEEEECCHHHHHHHTT-------TTCS--------CHHHHHHHHTHHHHHHHTCCGGGE
T ss_pred hhcchhhhhhhhhhee-CCCCEEEEEecCCchhhhh-------hhhh--------hhhhhhHHHHHHHHHHcCCeEEEE
Confidence 3345788999999999 9999988764321110000 0000 112223456778889999997655
No 113
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=95.03 E-value=0.025 Score=38.54 Aligned_cols=68 Identities=15% Similarity=0.174 Sum_probs=41.4
Q ss_pred HHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161 12 LKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 88 (99)
.++|+.+++.| +|||+++++ +.|.-.... ...+-.=.+....-..++.+++.++++++||++..+...
T Consensus 165 ~~vL~e~~rvL-kpGG~lv~l--vkPqfe~~~------~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~s 232 (291)
T 3hp7_A 165 NLILPALAKIL-VDGGQVVAL--VKPQFEAGR------EQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFS 232 (291)
T ss_dssp GGTHHHHHHHS-CTTCEEEEE--ECGGGTSCG------GGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHHHHc-CcCCEEEEE--ECcccccCh------hhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEEC
Confidence 67899999999 999999986 222111110 001100000000113457889999999999999888753
No 114
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=94.93 E-value=0.038 Score=33.78 Aligned_cols=45 Identities=24% Similarity=0.360 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCee
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGI 83 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~ 83 (99)
+....+|+++++.| +|||++++..... .+..++.++++++||...
T Consensus 111 ~~~~~~l~~~~~~l-~~gG~l~~~~~~~-----------------------------~~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 111 GELQEILRIIKDKL-KPGGRIIVTAILL-----------------------------ETKFEAMECLRDLGFDVN 155 (192)
T ss_dssp TCHHHHHHHHHHTE-EEEEEEEEEECBH-----------------------------HHHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHHHHhc-CCCcEEEEEecCc-----------------------------chHHHHHHHHHHCCCceE
Confidence 34578999999999 9999998865310 024578889999999443
No 115
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=94.84 E-value=0.089 Score=34.41 Aligned_cols=60 Identities=17% Similarity=0.102 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 88 (99)
.....+++.+++.| +|||+++++ .+.. +..++..+++++||...++.++
T Consensus 153 ~~~~~~l~~~~~~L-kpgG~l~~~---~~~~---------------------------~~~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 153 CTLEDTIRVAASLL-KQGGKANFV---HRPE---------------------------RLLDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp HHHHHHHHHHHHHE-EEEEEEEEE---ECTT---------------------------THHHHHHHHHHTTEEEEEEEEE
T ss_pred CCHHHHHHHHHHHc-cCCcEEEEE---EcHH---------------------------HHHHHHHHHHHCCCceEEEEEe
Confidence 34568999999999 999999984 2211 1346778888899998887765
Q ss_pred C------CCeeEEEEEC
Q 037161 89 V------CNSWVMEFYK 99 (99)
Q Consensus 89 ~------~~~~vie~~k 99 (99)
. ....+++++|
T Consensus 202 ~~~~~~~~~~~l~~~~k 218 (259)
T 3lpm_A 202 HPRSDREANTVLVEGIK 218 (259)
T ss_dssp ESSTTSCCSEEEEEEEE
T ss_pred ecCCCCCcEEEEEEEEe
Confidence 2 2456777654
No 116
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=94.74 E-value=0.037 Score=34.52 Aligned_cols=56 Identities=9% Similarity=-0.103 Sum_probs=38.1
Q ss_pred HHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHH--HcCCCeeEEEEcC
Q 037161 12 LKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLAT--AAGFSGIRFQCFV 89 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~--~aGf~~~~~~~~~ 89 (99)
.++++++++.| +|||++++++... ...+++.++++ ++||..+++.+..
T Consensus 144 ~~~l~~~~~~L-kpgG~l~~~~~~~-----------------------------~~~~~~~~~l~~~~~gf~~~~~~~~~ 193 (215)
T 4dzr_A 144 RRMAALPPYVL-ARGRAGVFLEVGH-----------------------------NQADEVARLFAPWRERGFRVRKVKDL 193 (215)
T ss_dssp HHHHTCCGGGB-CSSSEEEEEECTT-----------------------------SCHHHHHHHTGGGGGGTEECCEEECT
T ss_pred HHHHHHHHHHh-cCCCeEEEEEECC-----------------------------ccHHHHHHHHHHhhcCCceEEEEEec
Confidence 78899999999 9999966665310 11346777788 8889888777643
Q ss_pred -CCeeEEEE
Q 037161 90 -CNSWVMEF 97 (99)
Q Consensus 90 -~~~~vie~ 97 (99)
+...++.+
T Consensus 194 ~~~~r~~~~ 202 (215)
T 4dzr_A 194 RGIDRVIAV 202 (215)
T ss_dssp TSCEEEEEE
T ss_pred CCCEEEEEE
Confidence 33344433
No 117
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=94.73 E-value=0.05 Score=37.25 Aligned_cols=77 Identities=8% Similarity=-0.044 Sum_probs=47.2
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcC--------CCcee-cC-HHHH
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHS--------PRGKV-RT-KHEF 71 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~--------~~g~~-rt-~~e~ 71 (99)
|||..++++...+|+.+.+.+ +||+. +++|.+.++. +........+.. ..+... ..-.. +| .++.
T Consensus 188 vl~Yl~~~~~~~ll~~l~~~~-~~gs~-l~~d~~~~~~--~~~~~~~~~~~~-~~~~~~g~~~~~~l~~~~~~~~~~~~~ 262 (310)
T 2uyo_A 188 LLMYLPATAQDGLFTEIGGLS-AVGSR-IAVETSPLHG--DEWREQMQLRFR-RVSDALGFEQAVDVQELIYHDENRAVV 262 (310)
T ss_dssp CGGGSCHHHHHHHHHHHHHTC-CTTCE-EEEECCCTTC--SHHHHHHHHHHH-HHHC-----------CCTTCCTTCCCH
T ss_pred hHhhCCHHHHHHHHHHHHHhC-CCCeE-EEEEecCCCC--cchhHHHHHHHH-HHHHHcCCcCCCCccccccCCCChHHH
Confidence 789999999999999999988 78765 5557765543 110000010110 001100 01122 25 6799
Q ss_pred HHHHHHcCCCee
Q 037161 72 INLATAAGFSGI 83 (99)
Q Consensus 72 ~~ll~~aGf~~~ 83 (99)
.++|.+.||+.+
T Consensus 263 ~~~f~~~G~~~~ 274 (310)
T 2uyo_A 263 ADWLNRHGWRAT 274 (310)
T ss_dssp HHHHTTTTEEEE
T ss_pred HHHHHHCcCccc
Confidence 999999999988
No 118
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=94.44 E-value=0.0068 Score=38.98 Aligned_cols=47 Identities=13% Similarity=0.043 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161 11 CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 88 (99)
...+|+++++.| +|||+++ . -+...+.+++.++++++||+..++...
T Consensus 121 ~~~~l~~~~~~L-kpgG~l~----------------------------~--~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 167 (226)
T 3m33_A 121 PTSVILRLPELA-APDAHFL----------------------------Y--VGPRLNVPEVPERLAAVGWDIVAEDHV 167 (226)
T ss_dssp CSGGGGGHHHHE-EEEEEEE----------------------------E--EESSSCCTHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHc-CCCcEEE----------------------------E--eCCcCCHHHHHHHHHHCCCeEEEEEee
Confidence 345677888888 8888777 0 011234567899999999998877643
No 119
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=94.40 E-value=0.084 Score=33.58 Aligned_cols=50 Identities=18% Similarity=0.308 Sum_probs=36.9
Q ss_pred HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEcC
Q 037161 11 CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFV 89 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 89 (99)
..++|+++.+.| +|||++++.- +.. ..+.+++.++++++||....+....
T Consensus 158 ~~~~l~~~~~~L-kpgG~l~~~~---~~~-------------------------~~~~~~~~~~l~~~g~~~~~~~~~~ 207 (230)
T 3evz_A 158 SVKLLEEAFDHL-NPGGKVALYL---PDK-------------------------EKLLNVIKERGIKLGYSVKDIKFKV 207 (230)
T ss_dssp HHHHHHHHGGGE-EEEEEEEEEE---ESC-------------------------HHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred HHHHHHHHHHHh-CCCeEEEEEe---ccc-------------------------HhHHHHHHHHHHHcCCceEEEEecC
Confidence 478999999999 9999999861 110 0124688899999999777765443
No 120
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=94.24 E-value=0.00032 Score=46.03 Aligned_cols=68 Identities=13% Similarity=0.108 Sum_probs=41.0
Q ss_pred HHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEcC
Q 037161 12 LKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFV 89 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 89 (99)
..+++++++.| +|||++.+++.++.... ..+....++... .+...+..++.++++++||+.+++....
T Consensus 172 ~~l~~~~~~~L-kpgG~l~~~~~~~~~~~--------~~l~~~g~~~~~-~~~~~~~~~~~~~l~~~Gf~~v~~~~~~ 239 (254)
T 2h00_A 172 SVNTGGITEIM-AEGGELEFVKRIIHDSL--------QLKKRLRWYSCM-LGKKCSLAPLKEELRIQGVPKVTYTEFC 239 (254)
T ss_dssp -----CTTTTH-HHHTHHHHHHHHHHHHH--------HHGGGBSCEEEE-ESSTTSHHHHHHHHHHTTCSEEEEEEEE
T ss_pred HHHhhhHHHHE-ecCCEEEEEHHHHHHHH--------hcccceEEEEEC-CCChhHHHHHHHHHHHcCCCceEEEEEe
Confidence 35778889999 99999988876543210 011111111111 3455566899999999999999887653
No 121
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=93.91 E-value=0.11 Score=32.93 Aligned_cols=34 Identities=9% Similarity=-0.007 Sum_probs=25.5
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeec
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVL 36 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~ 36 (99)
|+.|.+.+....+++++.+.| +|||.+++.+...
T Consensus 137 v~~d~~~~~~~~~l~~~~~~L-~pgG~lv~~~~~~ 170 (223)
T 3duw_A 137 IFIDADKQNNPAYFEWALKLS-RPGTVIIGDNVVR 170 (223)
T ss_dssp EEECSCGGGHHHHHHHHHHTC-CTTCEEEEESCSG
T ss_pred EEEcCCcHHHHHHHHHHHHhc-CCCcEEEEeCCCc
Confidence 344555666789999999999 9999777755543
No 122
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=93.46 E-value=0.3 Score=38.23 Aligned_cols=86 Identities=12% Similarity=0.122 Sum_probs=48.4
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCC-----CCCchhhhhhhhhchHhhhcCCCceecCHHHHHH--
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPEL-----PENSATSKANSQIDVFMLTHSPRGKVRTKHEFIN-- 73 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~-----~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~-- 73 (99)
.++|+++++...++++++++.| +|| .++|.....+.. ..+...........-..+...++..+++.+||+.
T Consensus 804 eVLeHL~dp~l~~~L~eI~RvL-KPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~fRh~DHrFEWTReEFr~Wa 881 (950)
T 3htx_A 804 EVIEHMEEDQACEFGEKVLSLF-HPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKFRNHDHKFEWTREQFNQWA 881 (950)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTT-CCS-EEEEEECBGGGHHHHTCC------------CCSSCSCSSCSCCBCHHHHHHHH
T ss_pred CchhhCChHHHHHHHHHHHHHc-CCC-EEEEEecCchhhhhhhhcccccccccccccccccccccCcceeecHHHHHHHH
Confidence 3789999999999999999999 998 666654321100 0000000000000001111223566789999988
Q ss_pred --HHHHcCCCeeEEEEcC
Q 037161 74 --LATAAGFSGIRFQCFV 89 (99)
Q Consensus 74 --ll~~aGf~~~~~~~~~ 89 (99)
+.+..||++ ++.+++
T Consensus 882 e~LAer~GYsV-efvGVG 898 (950)
T 3htx_A 882 SKLGKRHNYSV-EFSGVG 898 (950)
T ss_dssp HHHHHHTTEEE-EEEEES
T ss_pred HHHHHhcCcEE-EEEccC
Confidence 556779855 555554
No 123
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=93.06 E-value=0.03 Score=36.37 Aligned_cols=55 Identities=7% Similarity=0.078 Sum_probs=38.0
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcC--
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAG-- 79 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aG-- 79 (99)
|+.|+++. ..+|+++++.| +|||++++.....+ ...++.++++++|
T Consensus 166 v~~~~~~~--~~~l~~~~~~L-~~gG~l~~~~~~~~-----------------------------~~~~~~~~l~~~g~~ 213 (255)
T 3mb5_A 166 VILDLPQP--ERVVEHAAKAL-KPGGFFVAYTPCSN-----------------------------QVMRLHEKLREFKDY 213 (255)
T ss_dssp EEECSSCG--GGGHHHHHHHE-EEEEEEEEEESSHH-----------------------------HHHHHHHHHHHTGGG
T ss_pred EEECCCCH--HHHHHHHHHHc-CCCCEEEEEECCHH-----------------------------HHHHHHHHHHHcCCC
Confidence 34456553 56899999999 99999988642110 1446777888888
Q ss_pred CCeeEEEEc
Q 037161 80 FSGIRFQCF 88 (99)
Q Consensus 80 f~~~~~~~~ 88 (99)
|..+++...
T Consensus 214 f~~~~~~e~ 222 (255)
T 3mb5_A 214 FMKPRTINV 222 (255)
T ss_dssp BSCCEEECC
T ss_pred ccccEEEEE
Confidence 888777543
No 124
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=92.99 E-value=0.42 Score=29.20 Aligned_cols=49 Identities=8% Similarity=0.110 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEcC
Q 037161 10 HCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFV 89 (99)
Q Consensus 10 ~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 89 (99)
+...+++++.+.+ |||++++.+... .+.+++.++++++||+.+.+....
T Consensus 102 ~~~~~~~~~~~~l--pgG~l~~~~~~~-----------------------------~~~~~l~~~l~~~gf~~~~~~~~~ 150 (170)
T 3q87_B 102 LGREVIDRFVDAV--TVGMLYLLVIEA-----------------------------NRPKEVLARLEERGYGTRILKVRK 150 (170)
T ss_dssp GGCHHHHHHHHHC--CSSEEEEEEEGG-----------------------------GCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred chHHHHHHHHhhC--CCCEEEEEEecC-----------------------------CCHHHHHHHHHHCCCcEEEEEeec
Confidence 4566788888877 888888766211 135688999999999998887653
No 125
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=92.78 E-value=0.13 Score=34.35 Aligned_cols=31 Identities=6% Similarity=0.161 Sum_probs=27.3
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEee
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
++|+|++++....|+++++.| |||++++.-.
T Consensus 119 ~l~~~~~~~~~~~l~~l~~lL--PGG~l~lS~~ 149 (261)
T 3iv6_A 119 LINRFTTEEARRACLGMLSLV--GSGTVRASVK 149 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHH--TTSEEEEEEE
T ss_pred hhHhCCHHHHHHHHHHHHHhC--cCcEEEEEec
Confidence 689999999999999999988 8999988643
No 126
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.71 E-value=0.79 Score=34.37 Aligned_cols=81 Identities=16% Similarity=0.130 Sum_probs=51.7
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhh-cC-CCceecCHHHHHHHHHHcC
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLT-HS-PRGKVRTKHEFINLATAAG 79 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~-~~-~~g~~rt~~e~~~ll~~aG 79 (99)
+|...+.+++.++|+.+. .+ |+|.++++|.+.+..+..+. .+. ....+...- .. .--...|.++..+.|.++|
T Consensus 226 vl~Yl~~~~~~~ll~~~~-~~--~~~~~~~~e~~~~~~~~d~f-~~~-m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~G 300 (695)
T 2zwa_A 226 SLAYMKPERSDSIIEATS-KM--ENSHFIILEQLIPKGPFEPF-SKQ-MLAHFKRNDSPLQSVLKYNTIESQVQRFNKLG 300 (695)
T ss_dssp SGGGSCHHHHHHHHHHHH-TS--SSEEEEEEEECCTTCTTSHH-HHH-HHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTT
T ss_pred EEEEcCHHHHHHHHHHHh-hC--CCceEEEEEeecCCCCCChH-HHH-HHHHHHHcCCCCCccccCCCHHHHHHHHHHCC
Confidence 577889999999999987 46 47788999998775433321 110 001111000 00 0113457999999999999
Q ss_pred CCeeEEEE
Q 037161 80 FSGIRFQC 87 (99)
Q Consensus 80 f~~~~~~~ 87 (99)
|+.+....
T Consensus 301 w~~v~~~~ 308 (695)
T 2zwa_A 301 FAYVNVGD 308 (695)
T ss_dssp CCEEEEEE
T ss_pred CCCcceee
Confidence 99876654
No 127
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=92.58 E-value=0.086 Score=34.94 Aligned_cols=32 Identities=9% Similarity=0.050 Sum_probs=24.9
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecC
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLP 37 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~ 37 (99)
++|..+. .+.++++++.| +|||++++.....+
T Consensus 108 ~~h~~~~---~~~~~e~~rvL-kpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 108 AMHWFDL---DRFWAELRRVA-RPGAVFAAVTYGLT 139 (257)
T ss_dssp CCTTCCH---HHHHHHHHHHE-EEEEEEEEEEECCC
T ss_pred ehhHhhH---HHHHHHHHHHc-CCCCEEEEEECCCC
Confidence 5665543 36899999999 99999999887544
No 128
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=92.30 E-value=0.043 Score=35.51 Aligned_cols=53 Identities=19% Similarity=0.113 Sum_probs=35.7
Q ss_pred cccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCe
Q 037161 3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSG 82 (99)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~ 82 (99)
+.++++ ...+|+++++.| +|||++++.....+ ...+..+.++++||..
T Consensus 171 ~~~~~~--~~~~l~~~~~~L-~~gG~l~~~~~~~~-----------------------------~~~~~~~~l~~~gf~~ 218 (258)
T 2pwy_A 171 ALDLME--PWKVLEKAALAL-KPDRFLVAYLPNIT-----------------------------QVLELVRAAEAHPFRL 218 (258)
T ss_dssp EEESSC--GGGGHHHHHHHE-EEEEEEEEEESCHH-----------------------------HHHHHHHHHTTTTEEE
T ss_pred EECCcC--HHHHHHHHHHhC-CCCCEEEEEeCCHH-----------------------------HHHHHHHHHHHCCCce
Confidence 335554 347899999999 99999999763110 1235666677788887
Q ss_pred eEEEE
Q 037161 83 IRFQC 87 (99)
Q Consensus 83 ~~~~~ 87 (99)
+++..
T Consensus 219 ~~~~~ 223 (258)
T 2pwy_A 219 ERVLE 223 (258)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76654
No 129
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=92.29 E-value=0.27 Score=32.04 Aligned_cols=33 Identities=6% Similarity=0.071 Sum_probs=24.9
Q ss_pred ccCChHHHHHHHHHHHHhccCCCceEEEEeeecC
Q 037161 4 HAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLP 37 (99)
Q Consensus 4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~ 37 (99)
-|.+.+.....|+++.+.| +|||.+++.+...+
T Consensus 142 ~d~~~~~~~~~l~~~~~~L-kpGG~lv~d~~~~~ 174 (242)
T 3r3h_A 142 IDADKTNYLNYYELALKLV-TPKGLIAIDNIFWD 174 (242)
T ss_dssp EESCGGGHHHHHHHHHHHE-EEEEEEEEECSSSS
T ss_pred EcCChHHhHHHHHHHHHhc-CCCeEEEEECCccC
Confidence 3444556778999999999 99998888665543
No 130
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=92.15 E-value=0.17 Score=32.55 Aligned_cols=33 Identities=15% Similarity=0.121 Sum_probs=25.8
Q ss_pred cccCChHHHHHHHHHHHHhccCCCceEEEEeeec
Q 037161 3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVL 36 (99)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~ 36 (99)
+-++..+....+++++.+.| +|||++++.+...
T Consensus 152 ~~~~~~~~~~~~l~~~~~~L-~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 152 FLDADKENYPNYYPLILKLL-KPGGLLIADNVLW 184 (239)
T ss_dssp EECSCGGGHHHHHHHHHHHE-EEEEEEEEECSSG
T ss_pred EEeCCHHHHHHHHHHHHHHc-CCCeEEEEEcccc
Confidence 44556667789999999999 9999998865443
No 131
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=91.95 E-value=0.84 Score=32.07 Aligned_cols=77 Identities=10% Similarity=0.111 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhh-ch-----HhhhcC------------CCceecCHHHH
Q 037161 10 HCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQI-DV-----FMLTHS------------PRGKVRTKHEF 71 (99)
Q Consensus 10 ~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~-dl-----~m~~~~------------~~g~~rt~~e~ 71 (99)
+-..+|+..++.| +|||++++.=.-.++. .+.........+ ++ .-|+.. ---..+|.+|+
T Consensus 203 D~~~fL~~ra~eL-~pGG~mvl~~~gr~~~-~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~ 280 (374)
T 3b5i_A 203 DLAEFLRARAAEV-KRGGAMFLVCLGRTSV-DPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDF 280 (374)
T ss_dssp HHHHHHHHHHHHE-EEEEEEEEEEEECCCS-STTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHH
T ss_pred HHHHHHHHHHHHh-CCCCEEEEEEecCCCC-ccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHH
Confidence 3455799999999 9999988865533322 110000001111 11 001110 00224899999
Q ss_pred HHHHH-HcCCCeeEEEEc
Q 037161 72 INLAT-AAGFSGIRFQCF 88 (99)
Q Consensus 72 ~~ll~-~aGf~~~~~~~~ 88 (99)
+++++ ++||++.++...
T Consensus 281 ~~~l~~~~~F~I~~le~~ 298 (374)
T 3b5i_A 281 KEVVDANGSFAIDKLVVY 298 (374)
T ss_dssp HHHHHHHCSEEEEEEEEE
T ss_pred HHHHHhcCCcEEEEEEEE
Confidence 99998 599999887644
No 132
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=91.82 E-value=0.1 Score=37.63 Aligned_cols=31 Identities=19% Similarity=0.300 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEeeecCCCC
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVEAVLPELP 40 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~ 40 (99)
++..+.|+++++.| +|||+|++.|.+.+++.
T Consensus 265 pdl~~aL~Ei~RvL-KPGGrIVssE~f~p~d~ 295 (438)
T 3uwp_A 265 PEVDHQLKERFANM-KEGGRIVSSKPFAPLNF 295 (438)
T ss_dssp HHHHHHHHHHHTTS-CTTCEEEESSCSSCTTC
T ss_pred chHHHHHHHHHHcC-CCCcEEEEeecccCCCC
Confidence 44667788999999 99999999999888764
No 133
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=91.39 E-value=0.065 Score=33.43 Aligned_cols=27 Identities=11% Similarity=0.208 Sum_probs=23.3
Q ss_pred hHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161 8 DEHCLKLLKNCYESINKEDGKLIVVEAV 35 (99)
Q Consensus 8 d~~~~~iL~~~~~al~~pgg~l~I~e~~ 35 (99)
.++..++|+++++.| +|||++++.+..
T Consensus 135 ~~~~~~~l~~~~~~L-kpgG~li~~~~~ 161 (215)
T 2pxx_A 135 VHTVDQVLSEVSRVL-VPGGRFISMTSA 161 (215)
T ss_dssp HHHHHHHHHHHHHHE-EEEEEEEEEESC
T ss_pred hHHHHHHHHHHHHhC-cCCCEEEEEeCC
Confidence 456789999999999 999999998754
No 134
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=91.03 E-value=0.067 Score=35.38 Aligned_cols=52 Identities=8% Similarity=0.013 Sum_probs=35.8
Q ss_pred ccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCee
Q 037161 4 HAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGI 83 (99)
Q Consensus 4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~ 83 (99)
-|+++. .++|+++.+.| +|||++++...... ..+++.++++++||+.+
T Consensus 185 ~~~~~~--~~~l~~~~~~L-kpgG~l~i~~~~~~-----------------------------~~~~~~~~l~~~Gf~~~ 232 (275)
T 1yb2_A 185 ADIPDP--WNHVQKIASMM-KPGSVATFYLPNFD-----------------------------QSEKTVLSLSASGMHHL 232 (275)
T ss_dssp ECCSCG--GGSHHHHHHTE-EEEEEEEEEESSHH-----------------------------HHHHHHHHSGGGTEEEE
T ss_pred EcCcCH--HHHHHHHHHHc-CCCCEEEEEeCCHH-----------------------------HHHHHHHHHHHCCCeEE
Confidence 345443 47899999999 99999998762110 13456667777888887
Q ss_pred EEEE
Q 037161 84 RFQC 87 (99)
Q Consensus 84 ~~~~ 87 (99)
++..
T Consensus 233 ~~~~ 236 (275)
T 1yb2_A 233 ETVE 236 (275)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7765
No 135
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=90.80 E-value=0.22 Score=32.45 Aligned_cols=32 Identities=9% Similarity=-0.013 Sum_probs=24.7
Q ss_pred cccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161 3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAV 35 (99)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~ 35 (99)
+-|.+.......|+++++.| +|||.|++.+..
T Consensus 141 ~~d~~~~~~~~~l~~~~~~L-kpGG~lv~~~~~ 172 (248)
T 3tfw_A 141 FIDADKPNNPHYLRWALRYS-RPGTLIIGDNVV 172 (248)
T ss_dssp EECSCGGGHHHHHHHHHHTC-CTTCEEEEECCS
T ss_pred EECCchHHHHHHHHHHHHhc-CCCeEEEEeCCC
Confidence 44555666788999999999 999988775543
No 136
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=90.63 E-value=0.07 Score=34.82 Aligned_cols=79 Identities=11% Similarity=0.150 Sum_probs=44.2
Q ss_pred cccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchH-hhhcCC-----------CceecCHHH
Q 037161 3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVF-MLTHSP-----------RGKVRTKHE 70 (99)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~-m~~~~~-----------~g~~rt~~e 70 (99)
+++|.++ ..++|+++++.| +|||++++........... ... ...++.. ...... ....+|.++
T Consensus 124 ~~~~~~~-~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (260)
T 2avn_A 124 VLSYVEN-KDKAFSEIRRVL-VPDGLLIATVDNFYTFLQQ-MIE--KDAWDQITRFLKTQTTSVGTTLFSFNSYAFKPED 198 (260)
T ss_dssp HHHHCSC-HHHHHHHHHHHE-EEEEEEEEEEEBHHHHHHH-HHH--TTCHHHHHHHHHHCEEEEECSSEEEEEECBCGGG
T ss_pred hhhcccc-HHHHHHHHHHHc-CCCeEEEEEeCChHHHHHH-hhc--chhHHHHHHHHhccccccCCCceeEEEeccCHHH
Confidence 3445333 788999999999 9999999876532100000 000 0000000 000000 012568888
Q ss_pred HHHHHHHcCCCeeEEEEcC
Q 037161 71 FINLATAAGFSGIRFQCFV 89 (99)
Q Consensus 71 ~~~ll~~aGf~~~~~~~~~ 89 (99)
+.++ +||+++++....
T Consensus 199 l~~l---aGf~~~~~~~~~ 214 (260)
T 2avn_A 199 LDSL---EGFETVDIRGIG 214 (260)
T ss_dssp GSSC---TTEEEEEEEEEC
T ss_pred HHHh---cCceEEEEECCC
Confidence 8888 999999988764
No 137
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=90.19 E-value=0.12 Score=32.73 Aligned_cols=34 Identities=9% Similarity=0.068 Sum_probs=26.4
Q ss_pred cccCChHHHHHHHHHHHHhccCCCceEEEEeeecC
Q 037161 3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLP 37 (99)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~ 37 (99)
+.|.+.+....+++++++.| +|||.+++.+...+
T Consensus 145 ~~~~~~~~~~~~l~~~~~~L-~pgG~lv~~~~~~~ 178 (225)
T 3tr6_A 145 YIDADKANTDLYYEESLKLL-REGGLIAVDNVLRR 178 (225)
T ss_dssp EECSCGGGHHHHHHHHHHHE-EEEEEEEEECSSGG
T ss_pred EECCCHHHHHHHHHHHHHhc-CCCcEEEEeCCCcC
Confidence 34555566788999999999 99999988776543
No 138
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=90.07 E-value=0.13 Score=33.99 Aligned_cols=27 Identities=22% Similarity=0.469 Sum_probs=20.4
Q ss_pred ccCChHHHHHHHHHHHHhccCCCceEEEEe
Q 037161 4 HAWSDEHCLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e 33 (99)
-|.++ ...+|+++.+.| +|||++++.+
T Consensus 187 ~~~~~--~~~~l~~~~~~L-~pgG~l~~~~ 213 (277)
T 1o54_A 187 LDVPD--PWNYIDKCWEAL-KGGGRFATVC 213 (277)
T ss_dssp ECCSC--GGGTHHHHHHHE-EEEEEEEEEE
T ss_pred ECCcC--HHHHHHHHHHHc-CCCCEEEEEe
Confidence 34444 347888999999 9999988876
No 139
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=89.99 E-value=0.92 Score=32.04 Aligned_cols=75 Identities=11% Similarity=0.077 Sum_probs=41.9
Q ss_pred HHHHHHHHHhccCCCceEEEEeeecCCCC-CCchh-hhhhhhhchHhh--------hcC-CCceecCHHHHHHHHHHcC-
Q 037161 12 LKLLKNCYESINKEDGKLIVVEAVLPELP-ENSAT-SKANSQIDVFML--------THS-PRGKVRTKHEFINLATAAG- 79 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~-~~~~~-~~~~~~~dl~m~--------~~~-~~g~~rt~~e~~~ll~~aG- 79 (99)
..+|+..++.| +|||++++.=.-.+... .+... .-...+.|+.-- -.. ---..+|.+|++.+++++|
T Consensus 205 ~~FL~~Ra~eL-~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~ 283 (384)
T 2efj_A 205 TTFLRIHSEEL-ISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGS 283 (384)
T ss_dssp HHHHHHHHHHE-EEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHh-ccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCC
Confidence 34599999999 99999988554333220 11100 001112222100 000 0123589999999999985
Q ss_pred CCeeEEEE
Q 037161 80 FSGIRFQC 87 (99)
Q Consensus 80 f~~~~~~~ 87 (99)
|++.++..
T Consensus 284 F~i~~le~ 291 (384)
T 2efj_A 284 FEILYLET 291 (384)
T ss_dssp EEEEEEEE
T ss_pred ceEEEEEE
Confidence 88877654
No 140
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=89.92 E-value=0.11 Score=35.52 Aligned_cols=28 Identities=18% Similarity=0.294 Sum_probs=24.4
Q ss_pred CChHHHHHHHHHHHHhccCCCceEEEEee
Q 037161 6 WSDEHCLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 6 w~d~~~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
++.+...++|+++++.| +|||+++|+..
T Consensus 277 ~~~~~~~~~l~~~~~~L-kpgG~l~i~~~ 304 (343)
T 2pjd_A 277 TSLDAAQTLIRGAVRHL-NSGGELRIVAN 304 (343)
T ss_dssp HHHHHHHHHHHHHGGGE-EEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhC-CCCcEEEEEEc
Confidence 35677899999999999 99999999765
No 141
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=89.53 E-value=4 Score=28.50 Aligned_cols=75 Identities=8% Similarity=-0.035 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHhccCCCceEEEEeeecCCCCCCc------hhhh-hhhhhchHhhhc---------CCCceecCHHHHHH
Q 037161 10 HCLKLLKNCYESINKEDGKLIVVEAVLPELPENS------ATSK-ANSQIDVFMLTH---------SPRGKVRTKHEFIN 73 (99)
Q Consensus 10 ~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~------~~~~-~~~~~dl~m~~~---------~~~g~~rt~~e~~~ 73 (99)
+-..+|+..++.| .|||++++.=.-.+.. .+. .... ...+.||.---. .---..+|.+|++.
T Consensus 187 D~~~FL~~Ra~EL-~pGG~mvl~~~gr~~~-~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~ 264 (359)
T 1m6e_X 187 DHALFLRCRAQEV-VPGGRMVLTILGRRSE-DRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEA 264 (359)
T ss_dssp HHHHHHHHHHHHB-CTTCEEEEEEEECSSS-SSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHH
T ss_pred HHHHHHHHHHHHh-cCCceEEEEEecCCCC-CccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHH
Confidence 4567899999999 9999998755443322 110 0000 111222210000 00124788999999
Q ss_pred HHHHcC-CCeeEEE
Q 037161 74 LATAAG-FSGIRFQ 86 (99)
Q Consensus 74 ll~~aG-f~~~~~~ 86 (99)
+++++| |++.++.
T Consensus 265 ~ie~~G~F~i~~~e 278 (359)
T 1m6e_X 265 EILKEGSFLIDHIE 278 (359)
T ss_dssp HHHHTTTBCCEEEE
T ss_pred HHHHcCCceEEEEE
Confidence 999996 4777654
No 142
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=88.66 E-value=0.57 Score=30.07 Aligned_cols=50 Identities=16% Similarity=0.155 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161 11 CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 88 (99)
...+++.+++.| +|||++++.+... . . ....++.+.++++||++.++..+
T Consensus 153 ~~~~l~~~~~~L-kpgG~l~~~~g~~-----~--~--------------------~~~~~~~~~l~~~g~~~~~~~~~ 202 (240)
T 1xdz_A 153 LSVLSELCLPLV-KKNGLFVALKAAS-----A--E--------------------EELNAGKKAITTLGGELENIHSF 202 (240)
T ss_dssp HHHHHHHHGGGE-EEEEEEEEEECC------C--H--------------------HHHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHhc-CCCCEEEEEeCCC-----c--h--------------------HHHHHHHHHHHHcCCeEeEEEEE
Confidence 568999999999 9999998863110 0 0 01346778899999999887653
No 143
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=87.71 E-value=0.038 Score=37.66 Aligned_cols=71 Identities=8% Similarity=0.050 Sum_probs=20.5
Q ss_pred HHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhh---hchHhhhcCCCcee-------cCHHHHHHHHHHcCCCee
Q 037161 14 LLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQ---IDVFMLTHSPRGKV-------RTKHEFINLATAAGFSGI 83 (99)
Q Consensus 14 iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~---~dl~m~~~~~~g~~-------rt~~e~~~ll~~aGf~~~ 83 (99)
+|+++++.| +|||++++.....+.-.. ....+... +........ ..+. +...+|.+.|+.|||+++
T Consensus 201 ~l~~~~~~L-kpgG~lv~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~g~y~~~l~~aGF~~v 276 (336)
T 2b25_A 201 TLPVFYPHL-KHGGVCAVYVVNITQVIE--LLDGIRTCELALSCEKISEV-IVRDWLVCLAKQKNGILAQKVESKINTDV 276 (336)
T ss_dssp THHHHGGGE-EEEEEEEEEESSHHHHHH--HHHHHHHHTCCEEEEEEECC-CCCCEEECC--------------------
T ss_pred HHHHHHHhc-CCCcEEEEEeCCHHHHHH--HHHHHHhcCCCcccceEEEe-cccceEEEeecccccchhhhhcccccccc
Confidence 789999999 999999987643221100 00000000 000000000 1111 122399999999999998
Q ss_pred EEEEc
Q 037161 84 RFQCF 88 (99)
Q Consensus 84 ~~~~~ 88 (99)
++...
T Consensus 277 ~~~~~ 281 (336)
T 2b25_A 277 QLDSQ 281 (336)
T ss_dssp -----
T ss_pred ccccc
Confidence 87644
No 144
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=87.35 E-value=0.34 Score=29.62 Aligned_cols=59 Identities=10% Similarity=0.140 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 88 (99)
+...++|+++++.| +|||++++....-.+.. .. ......+|.+.+...+|.+.+....
T Consensus 112 ~~~~~~l~~~~~~L-kpgG~l~i~~~~~~~~~-~~--------------------~~~~~~~~~~~l~~~~~~~~~~~~~ 169 (185)
T 3mti_A 112 HTTLEAIEKILDRL-EVGGRLAIMIYYGHDGG-DM--------------------EKDAVLEYVIGLDQRVFTAMLYQPL 169 (185)
T ss_dssp HHHHHHHHHHHHHE-EEEEEEEEEEC-------CH--------------------HHHHHHHHHHHSCTTTEEEEEEEES
T ss_pred hhHHHHHHHHHHhc-CCCcEEEEEEeCCCCCC-HH--------------------HHHHHHHHHHhCCCceEEEEEehhh
Confidence 56778899999999 99999999765322111 00 0112345666666778888887765
Q ss_pred C
Q 037161 89 V 89 (99)
Q Consensus 89 ~ 89 (99)
.
T Consensus 170 ~ 170 (185)
T 3mti_A 170 N 170 (185)
T ss_dssp S
T ss_pred c
Confidence 3
No 145
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=87.11 E-value=0.14 Score=32.23 Aligned_cols=32 Identities=16% Similarity=0.188 Sum_probs=24.0
Q ss_pred cccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161 3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAV 35 (99)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~ 35 (99)
+.|.+......+++++++.| +|||.+++.+..
T Consensus 131 ~~~~~~~~~~~~l~~~~~~L-kpgG~lv~~~~~ 162 (210)
T 3c3p_A 131 FMDCDVFNGADVLERMNRCL-AKNALLIAVNAL 162 (210)
T ss_dssp EEETTTSCHHHHHHHHGGGE-EEEEEEEEESSS
T ss_pred EEcCChhhhHHHHHHHHHhc-CCCeEEEEECcc
Confidence 33444455788999999999 999988875543
No 146
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=86.99 E-value=0.9 Score=29.28 Aligned_cols=26 Identities=12% Similarity=0.213 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHHHhccCCCceEEEEee
Q 037161 8 DEHCLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 8 d~~~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
.+...++++++++.| +|||++++.+.
T Consensus 190 ~~~~~~~l~~~~~~L-kpgG~l~~~~~ 215 (250)
T 1o9g_A 190 GQPVAGLLRSLASAL-PAHAVIAVTDR 215 (250)
T ss_dssp HHHHHHHHHHHHHHS-CTTCEEEEEES
T ss_pred ccHHHHHHHHHHHhc-CCCcEEEEeCc
Confidence 477889999999999 99999998554
No 147
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=86.79 E-value=0.36 Score=32.07 Aligned_cols=36 Identities=17% Similarity=0.014 Sum_probs=24.1
Q ss_pred CceecC---HHHHHHHHHHcCCCeeEEEEcCCCeeEEEE
Q 037161 62 RGKVRT---KHEFINLATAAGFSGIRFQCFVCNSWVMEF 97 (99)
Q Consensus 62 ~g~~rt---~~e~~~ll~~aGf~~~~~~~~~~~~~vie~ 97 (99)
+|...| ...+++.|.+|||++.++...+.....+.+
T Consensus 206 GG~l~tysaa~~vrr~L~~aGF~v~~~~g~~~kr~m~~a 244 (257)
T 2qy6_A 206 GGTLATFTSAGFVRRGLQEAGFTMQKRKGFGRKREMLCG 244 (257)
T ss_dssp EEEEEESCCBHHHHHHHHHHTEEEEEECCSTTCCCEEEE
T ss_pred CcEEEEEeCCHHHHHHHHHCCCEEEeCCCCCCCCceEEE
Confidence 555554 567889999999998876555544444443
No 148
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=86.41 E-value=0.33 Score=30.90 Aligned_cols=23 Identities=22% Similarity=0.291 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHhccCCCceEEEE
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~ 32 (99)
++...+|+++++.| +|||++++.
T Consensus 138 ~~~~~~l~~~~r~L-kpgG~l~i~ 160 (210)
T 1nt2_A 138 NQIEILKANAEFFL-KEKGEVVIM 160 (210)
T ss_dssp THHHHHHHHHHHHE-EEEEEEEEE
T ss_pred hHHHHHHHHHHHHh-CCCCEEEEE
Confidence 34556699999999 999999997
No 149
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=86.13 E-value=0.13 Score=33.05 Aligned_cols=32 Identities=13% Similarity=0.156 Sum_probs=24.1
Q ss_pred cccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161 3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAV 35 (99)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~ 35 (99)
+.+.+.+....+++++.+.| +|||.+++.+..
T Consensus 147 ~~~~~~~~~~~~l~~~~~~L-kpgG~lv~d~~~ 178 (232)
T 3ntv_A 147 FIDAAKAQSKKFFEIYTPLL-KHQGLVITDNVL 178 (232)
T ss_dssp EEETTSSSHHHHHHHHGGGE-EEEEEEEEECTT
T ss_pred EEcCcHHHHHHHHHHHHHhc-CCCeEEEEeeCC
Confidence 34555556788999999999 999988774443
No 150
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=86.12 E-value=0.5 Score=33.88 Aligned_cols=30 Identities=17% Similarity=0.159 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEeeecCCC
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVEAVLPEL 39 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~ 39 (99)
++....|+++++.| +|||++++.|.+.+..
T Consensus 336 ~d~~~~L~el~r~L-KpGG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 336 EDLNKKVEKILQTA-KVGCKIISLKSLRSLT 365 (433)
T ss_dssp HHHHHHHHHHHTTC-CTTCEEEESSCSSCTT
T ss_pred ccHHHHHHHHHHhC-CCCeEEEEeeccCCcc
Confidence 45567789999999 9999999999877755
No 151
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=85.40 E-value=0.49 Score=29.06 Aligned_cols=22 Identities=18% Similarity=0.264 Sum_probs=19.4
Q ss_pred HHHHHHHHHhccCCCceEEEEee
Q 037161 12 LKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
.++|+++++.| +|||++++...
T Consensus 125 ~~~l~~~~~~L-kpgG~lv~~~~ 146 (196)
T 2nyu_A 125 LTLLSVTPDIL-QPGGTFLCKTW 146 (196)
T ss_dssp HHHHHHHHHHE-EEEEEEEEEEC
T ss_pred HHHHHHHHHHh-cCCCEEEEEec
Confidence 58899999999 99999998754
No 152
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=85.37 E-value=0.65 Score=30.26 Aligned_cols=31 Identities=13% Similarity=0.113 Sum_probs=23.4
Q ss_pred ccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161 4 HAWSDEHCLKLLKNCYESINKEDGKLIVVEAV 35 (99)
Q Consensus 4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~ 35 (99)
-|.+......+++++.+.| +|||.+++.+..
T Consensus 162 ~d~~~~~~~~~l~~~~~~L-kpGG~lv~d~~~ 192 (247)
T 1sui_A 162 VDADKDNYLNYHKRLIDLV-KVGGVIGYDNTL 192 (247)
T ss_dssp ECSCSTTHHHHHHHHHHHB-CTTCCEEEECTT
T ss_pred EcCchHHHHHHHHHHHHhC-CCCeEEEEecCC
Confidence 3444455788999999999 999988775543
No 153
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=85.35 E-value=0.62 Score=28.00 Aligned_cols=22 Identities=9% Similarity=0.306 Sum_probs=19.3
Q ss_pred HHHHHHHHHhccCCCceEEEEee
Q 037161 12 LKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
.++++++++.| +|||++++.+.
T Consensus 107 ~~~l~~~~~~L-~~gG~l~~~~~ 128 (178)
T 3hm2_A 107 PGVFAAAWKRL-PVGGRLVANAV 128 (178)
T ss_dssp TTHHHHHHHTC-CTTCEEEEEEC
T ss_pred HHHHHHHHHhc-CCCCEEEEEee
Confidence 67899999999 99999998664
No 154
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=85.34 E-value=2 Score=28.42 Aligned_cols=50 Identities=10% Similarity=0.129 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeE
Q 037161 11 CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIR 84 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~ 84 (99)
..++++++.+.| +|||.+++.+....... .....+++.+.++++||+...
T Consensus 204 ~~~~l~~~~~~L-kpgG~l~~~~~~~~~~~-----------------------~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 204 THEFIPKALSIA-KDGAIIHYHNTVPEKLM-----------------------PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp GGGGHHHHHHHE-EEEEEEEEEEEEEGGGT-----------------------TTTTHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHC-CCCeEEEEEEeeccccc-----------------------cccHHHHHHHHHHHcCCeeEE
Confidence 467899999999 99999999887532110 112456888999999998876
No 155
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=85.10 E-value=0.43 Score=30.85 Aligned_cols=32 Identities=9% Similarity=0.037 Sum_probs=24.2
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEee
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
|+-|.+......+++++.+.| +|||.+++.+.
T Consensus 151 I~~d~~~~~~~~~l~~~~~~L-~pGG~lv~d~~ 182 (237)
T 3c3y_A 151 GFVDADKPNYIKYHERLMKLV-KVGGIVAYDNT 182 (237)
T ss_dssp EEECSCGGGHHHHHHHHHHHE-EEEEEEEEECT
T ss_pred EEECCchHHHHHHHHHHHHhc-CCCeEEEEecC
Confidence 344555666789999999999 99998766443
No 156
>1ssz_A Pulmonary surfactant-associated protein B; LUNG surfactant protein, saposin, surface active protein; NMR {Synthetic}
Probab=85.01 E-value=0.48 Score=21.16 Aligned_cols=18 Identities=28% Similarity=0.589 Sum_probs=15.1
Q ss_pred HHHHHHHHHHhccCCCceE
Q 037161 11 CLKLLKNCYESINKEDGKL 29 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l 29 (99)
|+.+++++...+ +.+||.
T Consensus 4 cr~likriqa~i-pk~grm 21 (34)
T 1ssz_A 4 CRALIKRIQAMI-PKGGRM 21 (34)
T ss_dssp HHHHHHHHHHHC-SSSCCC
T ss_pred HHHHHHHHHHHc-cccchh
Confidence 788999998888 888875
No 157
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=84.93 E-value=0.15 Score=32.55 Aligned_cols=31 Identities=3% Similarity=0.092 Sum_probs=23.6
Q ss_pred ccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161 4 HAWSDEHCLKLLKNCYESINKEDGKLIVVEAV 35 (99)
Q Consensus 4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~ 35 (99)
-+++.+....+|+++.+.| +|||++++.+..
T Consensus 132 ~~~~~~~~~~~l~~~~~~L-~pgG~lv~~~~~ 162 (233)
T 2gpy_A 132 IDAAKGQYRRFFDMYSPMV-RPGGLILSDNVL 162 (233)
T ss_dssp EEGGGSCHHHHHHHHGGGE-EEEEEEEEETTT
T ss_pred ECCCHHHHHHHHHHHHHHc-CCCeEEEEEcCC
Confidence 3444445678999999999 999999886543
No 158
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=84.81 E-value=0.33 Score=30.70 Aligned_cols=31 Identities=19% Similarity=0.450 Sum_probs=24.2
Q ss_pred ccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161 4 HAWSDEHCLKLLKNCYESINKEDGKLIVVEAV 35 (99)
Q Consensus 4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~ 35 (99)
-|.+......+++++.+.| +|||.+++.+..
T Consensus 151 ~d~~~~~~~~~l~~~~~~L-~pgG~lv~~~~~ 181 (229)
T 2avd_A 151 VDADKENCSAYYERCLQLL-RPGGILAVLRVL 181 (229)
T ss_dssp ECSCSTTHHHHHHHHHHHE-EEEEEEEEECCS
T ss_pred ECCCHHHHHHHHHHHHHHc-CCCeEEEEECCC
Confidence 3444555678999999999 999998887654
No 159
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=84.80 E-value=0.91 Score=31.00 Aligned_cols=23 Identities=9% Similarity=0.198 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHhccCCCceEEEEe
Q 037161 10 HCLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 10 ~~~~iL~~~~~al~~pgg~l~I~e 33 (99)
+-.++++++++.| +|||++++.+
T Consensus 200 d~~~~l~el~r~L-kPGG~Lvv~~ 222 (298)
T 3fpf_A 200 PKRRVFRNIHRYV-DTETRIIYRT 222 (298)
T ss_dssp CHHHHHHHHHHHC-CTTCEEEEEE
T ss_pred CHHHHHHHHHHHc-CCCcEEEEEc
Confidence 3568999999999 9999999976
No 160
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=84.66 E-value=0.74 Score=28.33 Aligned_cols=26 Identities=23% Similarity=0.273 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEeee
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVEAV 35 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e~~ 35 (99)
+...++|+++.+.| +|||++++....
T Consensus 116 ~~~~~~l~~~~~~L-k~gG~l~~~~~~ 141 (197)
T 3eey_A 116 ETTIQALSKAMELL-VTGGIITVVIYY 141 (197)
T ss_dssp HHHHHHHHHHHHHE-EEEEEEEEEECC
T ss_pred ccHHHHHHHHHHhC-cCCCEEEEEEcc
Confidence 35667999999999 999999998754
No 161
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=84.01 E-value=0.67 Score=31.38 Aligned_cols=24 Identities=29% Similarity=0.481 Sum_probs=20.7
Q ss_pred HHHHHHHHHhccCCCceEEEEeeec
Q 037161 12 LKLLKNCYESINKEDGKLIVVEAVL 36 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~~~ 36 (99)
.++|+++++.| +|||++++....+
T Consensus 226 ~~~L~~~~~~L-kpGG~lv~stcs~ 249 (315)
T 1ixk_A 226 MRLLEKGLEVL-KPGGILVYSTCSL 249 (315)
T ss_dssp HHHHHHHHHHE-EEEEEEEEEESCC
T ss_pred HHHHHHHHHhC-CCCCEEEEEeCCC
Confidence 68999999999 9999998876544
No 162
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=83.80 E-value=0.51 Score=30.29 Aligned_cols=33 Identities=3% Similarity=0.126 Sum_probs=25.1
Q ss_pred cccCChHHHHHHHHHHHHhccCCCceEEEEeeec
Q 037161 3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVL 36 (99)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~ 36 (99)
+.|.+.+....+++++.+.| +|||.+++.+...
T Consensus 153 ~~d~~~~~~~~~l~~~~~~L-kpgG~lv~~~~~~ 185 (232)
T 3cbg_A 153 FIDADKRNYPRYYEIGLNLL-RRGGLMVIDNVLW 185 (232)
T ss_dssp EECSCGGGHHHHHHHHHHTE-EEEEEEEEECTTG
T ss_pred EECCCHHHHHHHHHHHHHHc-CCCeEEEEeCCCc
Confidence 33444566788999999999 9999988866543
No 163
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=83.79 E-value=0.83 Score=27.02 Aligned_cols=22 Identities=18% Similarity=0.298 Sum_probs=19.7
Q ss_pred HHHHHHHHHhccCCCceEEEEee
Q 037161 12 LKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
.++|+++.+.| +|||++++...
T Consensus 116 ~~~l~~~~~~L-~~gG~l~~~~~ 137 (180)
T 1ej0_A 116 ELALEMCRDVL-APGGSFVVKVF 137 (180)
T ss_dssp HHHHHHHHHHE-EEEEEEEEEEE
T ss_pred HHHHHHHHHHc-CCCcEEEEEEe
Confidence 68999999999 99999998665
No 164
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=83.76 E-value=1.9 Score=26.33 Aligned_cols=29 Identities=14% Similarity=0.012 Sum_probs=23.4
Q ss_pred CChHHHHHHHHHHHH--hccCCCceEEEEeee
Q 037161 6 WSDEHCLKLLKNCYE--SINKEDGKLIVVEAV 35 (99)
Q Consensus 6 w~d~~~~~iL~~~~~--al~~pgg~l~I~e~~ 35 (99)
+..++..++++.+.+ .| +|||++++....
T Consensus 125 ~~~~~~~~~l~~~~~~~~L-~pgG~l~~~~~~ 155 (189)
T 3p9n_A 125 VDSADVDAILAALGTNGWT-REGTVAVVERAT 155 (189)
T ss_dssp SCHHHHHHHHHHHHHSSSC-CTTCEEEEEEET
T ss_pred cchhhHHHHHHHHHhcCcc-CCCeEEEEEecC
Confidence 344678899999999 99 999999886543
No 165
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=83.66 E-value=0.3 Score=41.86 Aligned_cols=75 Identities=12% Similarity=0.103 Sum_probs=24.4
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS 81 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~ 81 (99)
+||.-++ ....|+++++.| +|||++++.|...... .+.....++-. ...++..-+.++|.++|..+||.
T Consensus 1320 vl~~t~~--~~~~l~~~~~lL-~p~G~l~~~e~~~~~~-----~g~~~~~~~~~---~r~~~~~~~~~~w~~~l~~~gf~ 1388 (2512)
T 2vz8_A 1320 ALATLGD--PAVAVGNMAATL-KEGGFLLLHTLLAGHP-----LGEMVGFLTSP---EQGGRHLLSQDQWESLFAGASLH 1388 (2512)
T ss_dssp C-----------------------CCEEEEEEC----------------------------------CTTTTSSTTTTEE
T ss_pred ccccccc--HHHHHHHHHHhc-CCCcEEEEEecccccc-----ccccccccccc---cccCCcccCHHHHHHHHHhCCCc
Confidence 4553333 456899999999 9999999987532100 00000001100 00012345677899999999999
Q ss_pred eeEEEE
Q 037161 82 GIRFQC 87 (99)
Q Consensus 82 ~~~~~~ 87 (99)
.+....
T Consensus 1389 ~~~~~~ 1394 (2512)
T 2vz8_A 1389 LVALKR 1394 (2512)
T ss_dssp EEEEEE
T ss_pred eeeecc
Confidence 877643
No 166
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=82.91 E-value=0.47 Score=30.44 Aligned_cols=32 Identities=16% Similarity=0.312 Sum_probs=23.9
Q ss_pred cccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161 3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEAV 35 (99)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~ 35 (99)
+-|.+..+....++++.+.| +|||.+++.+..
T Consensus 134 ~~d~~~~~~~~~l~~~~~~L-kpGG~lv~dn~~ 165 (221)
T 3dr5_A 134 FGQVSPMDLKALVDAAWPLL-RRGGALVLADAL 165 (221)
T ss_dssp EECCCTTTHHHHHHHHHHHE-EEEEEEEETTTT
T ss_pred EEcCcHHHHHHHHHHHHHHc-CCCcEEEEeCCC
Confidence 44555556678999999999 999988874443
No 167
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=82.91 E-value=0.32 Score=34.87 Aligned_cols=29 Identities=10% Similarity=0.245 Sum_probs=24.0
Q ss_pred ccCChHHHHHHHHHHHHhccCCCceEEEEeee
Q 037161 4 HAWSDEHCLKLLKNCYESINKEDGKLIVVEAV 35 (99)
Q Consensus 4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~ 35 (99)
|.| ++..+.|+++++.| +|||.++|.|..
T Consensus 298 H~~--~d~~~aL~el~rvL-KPGGvlVi~Dl~ 326 (419)
T 3sso_A 298 HIN--AHVRTSFAALFPHV-RPGGLYVIEDMW 326 (419)
T ss_dssp CCH--HHHHHHHHHHGGGE-EEEEEEEEECGG
T ss_pred ccc--hhHHHHHHHHHHhc-CCCeEEEEEecc
Confidence 544 34678999999999 999999998865
No 168
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=81.55 E-value=0.72 Score=28.44 Aligned_cols=20 Identities=25% Similarity=0.233 Sum_probs=17.2
Q ss_pred HHHHHHHHHhccCCCceEEEE
Q 037161 12 LKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~ 32 (99)
.++|+++++.| +|||++++.
T Consensus 134 ~~~l~~~~~~L-kpgG~lv~~ 153 (201)
T 2plw_A 134 LSITHFMEQYI-NIGGTYIVK 153 (201)
T ss_dssp HHHHHHHHHHE-EEEEEEEEE
T ss_pred HHHHHHHHHHc-cCCCEEEEE
Confidence 35899999999 999998874
No 169
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=80.68 E-value=1.8 Score=28.63 Aligned_cols=28 Identities=14% Similarity=0.135 Sum_probs=21.1
Q ss_pred ccccCChHHHHHHHHHHHHhccC---C--CceEEEE
Q 037161 2 ILHAWSDEHCLKLLKNCYESINK---E--DGKLIVV 32 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~---p--gg~l~I~ 32 (99)
++|+. +....+|+.+++.| + | ||+++|+
T Consensus 172 vl~~~--~~~~~ll~~l~~~L-k~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 172 LLSFH--QAHDALLRSVKMLL-ALPANDPTAVALVT 204 (281)
T ss_dssp CCSCG--GGHHHHHHHHHHHB-CCTTTCTTCEEEEE
T ss_pred cccCh--HHHHHHHHHHHHHh-cccCCCCCCEEEEE
Confidence 34443 34778999999999 8 8 9998773
No 170
>2cz4_A Hypothetical protein TTHA0516; conserved hypothetical protein, PII-like signaling protein, structural genomics, NPPSFA; 1.93A {Thermus thermophilus} SCOP: d.58.5.1
Probab=79.93 E-value=3.2 Score=24.35 Aligned_cols=27 Identities=22% Similarity=0.175 Sum_probs=23.0
Q ss_pred ChHHHHHHHHHHHHhccCCC--ceEEEEee
Q 037161 7 SDEHCLKLLKNCYESINKED--GKLIVVEA 34 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~~pg--g~l~I~e~ 34 (99)
+|+.+.+++..+.+++ ..| |+++|.+-
T Consensus 82 ~de~ve~vv~~I~~~~-~tg~~GkIFV~~V 110 (119)
T 2cz4_A 82 SEEVALRILQRLQEEY-FPHYAVIAYVENV 110 (119)
T ss_dssp CHHHHHHHHHHHHHHT-TTTSCCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHh-cCCCCEEEEEEEe
Confidence 6889999999999777 666 99999875
No 171
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=79.83 E-value=1.4 Score=29.02 Aligned_cols=25 Identities=20% Similarity=0.373 Sum_probs=21.3
Q ss_pred HHHHHHHHHhccCCCceEEEEeeecC
Q 037161 12 LKLLKNCYESINKEDGKLIVVEAVLP 37 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~~~~ 37 (99)
.++|+++.+.| +|||++++....+.
T Consensus 191 ~~~l~~~~~~L-kpgG~lv~stcs~~ 215 (274)
T 3ajd_A 191 KELIDIGIDLL-KKDGELVYSTCSME 215 (274)
T ss_dssp HHHHHHHHHHE-EEEEEEEEEESCCC
T ss_pred HHHHHHHHHhC-CCCCEEEEEECCCC
Confidence 78999999999 99999988776443
No 172
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=79.60 E-value=1.7 Score=29.97 Aligned_cols=25 Identities=4% Similarity=-0.153 Sum_probs=21.6
Q ss_pred HHHHHHHHHHhccCCCceEEEEeeec
Q 037161 11 CLKLLKNCYESINKEDGKLIVVEAVL 36 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I~e~~~ 36 (99)
..++|++++++| +|||++++++...
T Consensus 256 ~~~~l~~~~~~L-kpgG~~~~~~~~~ 280 (373)
T 2qm3_A 256 IRAFVGRGIATL-KGPRCAGYFGITR 280 (373)
T ss_dssp HHHHHHHHHHTB-CSTTCEEEEEECT
T ss_pred HHHHHHHHHHHc-ccCCeEEEEEEec
Confidence 588999999999 9999988888653
No 173
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=79.49 E-value=0.49 Score=30.55 Aligned_cols=20 Identities=25% Similarity=0.310 Sum_probs=18.0
Q ss_pred HHHHHHHHHhccCCCceEEEE
Q 037161 12 LKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~ 32 (99)
..+|+++.+.| +|||.+++.
T Consensus 153 ~~~l~~~~~~L-kpgG~l~~~ 172 (246)
T 2vdv_E 153 NTLLSEYAYVL-KEGGVVYTI 172 (246)
T ss_dssp HHHHHHHHHHE-EEEEEEEEE
T ss_pred HHHHHHHHHHc-CCCCEEEEE
Confidence 47999999999 999999984
No 174
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=79.06 E-value=1.8 Score=27.32 Aligned_cols=21 Identities=19% Similarity=0.259 Sum_probs=18.3
Q ss_pred HHHHHHHHHhccCCCceEEEEe
Q 037161 12 LKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e 33 (99)
..+|+.+++.| +|||.+++.-
T Consensus 133 ~~~l~~~~~~L-kpgG~l~~~t 153 (213)
T 2fca_A 133 SHFLKKYEEVM-GKGGSIHFKT 153 (213)
T ss_dssp HHHHHHHHHHH-TTSCEEEEEE
T ss_pred HHHHHHHHHHc-CCCCEEEEEe
Confidence 57899999999 9999998853
No 175
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=78.74 E-value=1.4 Score=27.55 Aligned_cols=23 Identities=4% Similarity=0.263 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhccCCCceEEEEee
Q 037161 11 CLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
+..+|+.+.+.| +|||++++.-+
T Consensus 118 ~~~~l~~a~~~L-kpGG~lv~k~~ 140 (191)
T 3dou_A 118 GQRVMEIAVRYL-RNGGNVLLKQF 140 (191)
T ss_dssp HHHHHHHHHHHE-EEEEEEEEEEE
T ss_pred HHHHHHHHHHHc-cCCCEEEEEEc
Confidence 567899999999 99999987554
No 176
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=77.59 E-value=2.1 Score=26.83 Aligned_cols=43 Identities=14% Similarity=0.237 Sum_probs=31.9
Q ss_pred HHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEE
Q 037161 14 LLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQ 86 (99)
Q Consensus 14 iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~ 86 (99)
+++++++.| +|||++++..... .+..+..+++++.||++.++.
T Consensus 136 ~l~~~~~~L-kpgG~lv~~~~~~-----------------------------~~~~~~~~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 136 LYDRLWEWL-APGTRIVANAVTL-----------------------------ESETLLTQLHARHGGQLLRID 178 (204)
T ss_dssp HHHHHHHHS-CTTCEEEEEECSH-----------------------------HHHHHHHHHHHHHCSEEEEEE
T ss_pred HHHHHHHhc-CCCcEEEEEecCc-----------------------------ccHHHHHHHHHhCCCcEEEEE
Confidence 899999999 9999998854311 024467778888888877764
No 177
>2dwf_A Pulmonary surfactant-associated protein B; mini-B, SP-B, surfactant protein B, lipid associated protein, surface active protein; NMR {Synthetic} SCOP: j.35.1.1 PDB: 2jou_A
Probab=77.12 E-value=1.3 Score=20.07 Aligned_cols=18 Identities=28% Similarity=0.589 Sum_probs=13.8
Q ss_pred HHHHHHHHHHhccCCCceE
Q 037161 11 CLKLLKNCYESINKEDGKL 29 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l 29 (99)
|..+++++.... |.||++
T Consensus 4 Crtlikriq~vI-Pk~~r~ 21 (34)
T 2dwf_A 4 CRALIKRIQAMI-PKGGRM 21 (34)
T ss_dssp HHHHHHHHHHHC-TTCCSC
T ss_pred HHHHHHHHHhhc-CCcccc
Confidence 678899988888 777543
No 178
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=76.49 E-value=1.6 Score=28.10 Aligned_cols=24 Identities=13% Similarity=0.329 Sum_probs=20.2
Q ss_pred HHHHHHHHHHH-hccCCCceEEEEee
Q 037161 10 HCLKLLKNCYE-SINKEDGKLIVVEA 34 (99)
Q Consensus 10 ~~~~iL~~~~~-al~~pgg~l~I~e~ 34 (99)
+..++|+++++ .| +|||++++.|.
T Consensus 164 ~~~~~l~~~~r~~L-kpGG~lv~~d~ 188 (236)
T 2bm8_A 164 NTFNIMKWAVDHLL-EEGDYFIIEDM 188 (236)
T ss_dssp SHHHHHHHHHHHTC-CTTCEEEECSC
T ss_pred hHHHHHHHHHHhhC-CCCCEEEEEeC
Confidence 35678999996 99 99999999775
No 179
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=76.25 E-value=2.3 Score=26.58 Aligned_cols=20 Identities=15% Similarity=0.260 Sum_probs=17.8
Q ss_pred HHHHHHHHHhccCCCceEEEE
Q 037161 12 LKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~ 32 (99)
..+|+++++.| +|||.+++.
T Consensus 136 ~~~l~~~~~~L-kpgG~l~~~ 155 (214)
T 1yzh_A 136 KTFLDTFKRIL-PENGEIHFK 155 (214)
T ss_dssp HHHHHHHHHHS-CTTCEEEEE
T ss_pred HHHHHHHHHHc-CCCcEEEEE
Confidence 57999999999 999998874
No 180
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=76.12 E-value=2.5 Score=30.55 Aligned_cols=25 Identities=16% Similarity=0.462 Sum_probs=20.7
Q ss_pred HHHHHHHHHhccCCCceEEEEeeecC
Q 037161 12 LKLLKNCYESINKEDGKLIVVEAVLP 37 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~~~~ 37 (99)
.+||+++.+.| +|||+|++....+.
T Consensus 226 ~~iL~~a~~~L-kpGG~LvysTcs~~ 250 (479)
T 2frx_A 226 RELIDSAFHAL-RPGGTLVYSTCTLN 250 (479)
T ss_dssp HHHHHHHHHHE-EEEEEEEEEESCCS
T ss_pred HHHHHHHHHhc-CCCCEEEEecccCC
Confidence 57899999999 99999988766443
No 181
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=75.90 E-value=1.1 Score=29.08 Aligned_cols=20 Identities=15% Similarity=0.207 Sum_probs=17.8
Q ss_pred HHHHHHHHHhccCCCceEEEE
Q 037161 12 LKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~ 32 (99)
..+|+++++.| +|||.+++.
T Consensus 148 ~~~l~~~~~~L-kpGG~l~~~ 167 (235)
T 3ckk_A 148 PTLLAEYAYVL-RVGGLVYTI 167 (235)
T ss_dssp HHHHHHHHHHE-EEEEEEEEE
T ss_pred HHHHHHHHHHC-CCCCEEEEE
Confidence 37999999999 999999875
No 182
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=74.96 E-value=1.6 Score=27.67 Aligned_cols=22 Identities=14% Similarity=0.135 Sum_probs=18.9
Q ss_pred HHHHHHHHHhccCCCceEEEEee
Q 037161 12 LKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
..+|+++.+.| +|||++++...
T Consensus 170 ~~~l~~~~~~L-~~gG~l~~~~~ 191 (248)
T 2yvl_A 170 WHYLEKVHKSL-MEGAPVGFLLP 191 (248)
T ss_dssp GGGHHHHHHHB-CTTCEEEEEES
T ss_pred HHHHHHHHHHc-CCCCEEEEEeC
Confidence 46789999999 99999999764
No 183
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=74.95 E-value=0.51 Score=32.38 Aligned_cols=30 Identities=13% Similarity=0.141 Sum_probs=24.2
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEE
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~ 32 (99)
++|.|..+.....+.++++.| +|||++++.
T Consensus 125 ~~~~~~~~~~~~~l~~~~~~L-kpgG~li~~ 154 (348)
T 2y1w_A 125 MGYMLFNERMLESYLHAKKYL-KPSGNMFPT 154 (348)
T ss_dssp CBTTBTTTSHHHHHHHGGGGE-EEEEEEESC
T ss_pred chhcCChHHHHHHHHHHHhhc-CCCeEEEEe
Confidence 356677777888899999999 999998854
No 184
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=74.67 E-value=4 Score=27.55 Aligned_cols=19 Identities=16% Similarity=0.280 Sum_probs=16.3
Q ss_pred HHHHHHHHHhccCCCceEEE
Q 037161 12 LKLLKNCYESINKEDGKLIV 31 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I 31 (99)
..+|+.+++.| +|||.+++
T Consensus 171 l~~L~~~~~~L-kpGG~~v~ 189 (305)
T 2p41_A 171 LRVLNLVENWL-SNNTQFCV 189 (305)
T ss_dssp HHHHHHHHHHC-CTTCEEEE
T ss_pred HHHHHHHHHHh-CCCCEEEE
Confidence 36899999999 99997776
No 185
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=74.55 E-value=1.2 Score=31.07 Aligned_cols=27 Identities=19% Similarity=0.425 Sum_probs=21.7
Q ss_pred CChHHHHHHHHHHHHhccCCCceEEEEe
Q 037161 6 WSDEHCLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 6 w~d~~~~~iL~~~~~al~~pgg~l~I~e 33 (99)
.++....++++++++.| +|||+++|+-
T Consensus 308 ~~~~~~~~~l~~~~~~L-kpgG~l~iv~ 334 (375)
T 4dcm_A 308 LTDNVAWEMFHHARRCL-KINGELYIVA 334 (375)
T ss_dssp --CCHHHHHHHHHHHHE-EEEEEEEEEE
T ss_pred cCHHHHHHHHHHHHHhC-CCCcEEEEEE
Confidence 34556778999999999 9999999964
No 186
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=74.43 E-value=1.1 Score=31.96 Aligned_cols=25 Identities=20% Similarity=0.335 Sum_probs=22.0
Q ss_pred HHHHHHHHHhccCCCceEEEEeeecC
Q 037161 12 LKLLKNCYESINKEDGKLIVVEAVLP 37 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~~~~ 37 (99)
.++|+++.+.| +|||++++....+.
T Consensus 369 ~~iL~~a~~~L-kpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 369 RELLESAARLV-KPGGRLLYTTCSIF 393 (450)
T ss_dssp HHHHHHHHTTE-EEEEEEEEEESCCC
T ss_pred HHHHHHHHHhc-CCCcEEEEEeCCCC
Confidence 68999999999 99999999887554
No 187
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=74.35 E-value=0.71 Score=31.00 Aligned_cols=20 Identities=30% Similarity=0.705 Sum_probs=17.8
Q ss_pred HHHHHHHHHhccCCCceEEEE
Q 037161 12 LKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~ 32 (99)
.++++++++.| +|||.+++.
T Consensus 185 ~~~l~~~~~~L-kpgG~lv~~ 204 (296)
T 1inl_A 185 EEFYQACYDAL-KEDGVFSAE 204 (296)
T ss_dssp HHHHHHHHHHE-EEEEEEEEE
T ss_pred HHHHHHHHHhc-CCCcEEEEE
Confidence 68999999999 999988874
No 188
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=74.28 E-value=1.9 Score=30.12 Aligned_cols=26 Identities=8% Similarity=0.160 Sum_probs=22.5
Q ss_pred ChHHHHHHHHHHHHhccCCCceEEEEe
Q 037161 7 SDEHCLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~~pgg~l~I~e 33 (99)
..+...++++++++.| +|||+++|.-
T Consensus 315 ~~~~~~~~l~~~~~~L-kpGG~l~iv~ 340 (381)
T 3dmg_A 315 ILDVAQAFVNVAAARL-RPGGVFFLVS 340 (381)
T ss_dssp CCHHHHHHHHHHHHHE-EEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHhc-CcCcEEEEEE
Confidence 3567889999999999 9999999863
No 189
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=73.10 E-value=1.4 Score=29.59 Aligned_cols=21 Identities=10% Similarity=0.371 Sum_probs=18.3
Q ss_pred HHHHHHHHHhccCCCceEEEEe
Q 037161 12 LKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e 33 (99)
..+++.++++| +|||.+++.-
T Consensus 178 ~~f~~~~~~~L-kpgG~lv~~~ 198 (294)
T 3adn_A 178 SAFYEGCKRCL-NPGGIFVAQN 198 (294)
T ss_dssp HHHHHHHHHTE-EEEEEEEEEE
T ss_pred HHHHHHHHHhc-CCCCEEEEec
Confidence 67999999999 9999888753
No 190
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=71.36 E-value=1.2 Score=29.13 Aligned_cols=22 Identities=9% Similarity=0.205 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhccCCCceEEEE
Q 037161 10 HCLKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 10 ~~~~iL~~~~~al~~pgg~l~I~ 32 (99)
....+++.+++.| +|||+++++
T Consensus 148 ~~~~~l~~~~~~L-kpgG~l~~~ 169 (260)
T 2ozv_A 148 LFEDWIRTASAIM-VSGGQLSLI 169 (260)
T ss_dssp CHHHHHHHHHHHE-EEEEEEEEE
T ss_pred CHHHHHHHHHHHc-CCCCEEEEE
Confidence 3678899999999 999999884
No 191
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=71.10 E-value=2.2 Score=28.96 Aligned_cols=27 Identities=19% Similarity=0.310 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEeeec
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVEAVL 36 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~ 36 (99)
+...+.|..+.+.| +|||||+|+-+.-
T Consensus 210 ~~L~~~L~~a~~~L-~~gGrl~visfHS 236 (285)
T 1wg8_A 210 NALKEFLEQAAEVL-APGGRLVVIAFHS 236 (285)
T ss_dssp HHHHHHHHHHHHHE-EEEEEEEEEECSH
T ss_pred HHHHHHHHHHHHHh-cCCCEEEEEecCc
Confidence 34567889999999 9999999988753
No 192
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=71.06 E-value=1.7 Score=30.67 Aligned_cols=25 Identities=16% Similarity=0.349 Sum_probs=21.7
Q ss_pred HHHHHHHHHhccCCCceEEEEeeecC
Q 037161 12 LKLLKNCYESINKEDGKLIVVEAVLP 37 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~~~~ 37 (99)
.++|+++.+.| +|||++++....+.
T Consensus 354 ~~~L~~a~~~L-kpGG~lvystcs~~ 378 (429)
T 1sqg_A 354 SEILDAIWPHL-KTGGTLVYATCSVL 378 (429)
T ss_dssp HHHHHHHGGGE-EEEEEEEEEESCCC
T ss_pred HHHHHHHHHhc-CCCCEEEEEECCCC
Confidence 58999999999 99999999886554
No 193
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=70.77 E-value=2.3 Score=29.76 Aligned_cols=26 Identities=19% Similarity=0.310 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEeee
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVEAV 35 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e~~ 35 (99)
+...+.|..+.+.| +|||||+|+-+-
T Consensus 251 ~~L~~~L~~a~~~L-~~gGRl~VISFH 276 (347)
T 3tka_A 251 EEIEQALKSSLNVL-APGGRLSIISFH 276 (347)
T ss_dssp HHHHHHHHHHHHHE-EEEEEEEEEESS
T ss_pred HHHHHHHHHHHHHh-CCCCEEEEEecC
Confidence 34567889999999 999999999875
No 194
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=70.29 E-value=1.1 Score=29.28 Aligned_cols=21 Identities=24% Similarity=0.303 Sum_probs=18.5
Q ss_pred HHHHHHHHhccCCCceEEEEee
Q 037161 13 KLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 13 ~iL~~~~~al~~pgg~l~I~e~ 34 (99)
.+|+++.+.| +|||++++...
T Consensus 184 ~~l~~~~~~L-~pgG~l~~~~~ 204 (280)
T 1i9g_A 184 EVLDAVSRLL-VAGGVLMVYVA 204 (280)
T ss_dssp GGHHHHHHHE-EEEEEEEEEES
T ss_pred HHHHHHHHhC-CCCCEEEEEeC
Confidence 7899999999 99999999764
No 195
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=70.12 E-value=1.8 Score=27.60 Aligned_cols=20 Identities=5% Similarity=0.077 Sum_probs=17.5
Q ss_pred HHHHHHHHhccCCCceEEEEe
Q 037161 13 KLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 13 ~iL~~~~~al~~pgg~l~I~e 33 (99)
.+++.+++.| +|||.+++.-
T Consensus 131 ~~l~~~~r~L-kpGG~l~i~t 150 (218)
T 3dxy_A 131 PFAELVKSKL-QLGGVFHMAT 150 (218)
T ss_dssp HHHHHHHHHE-EEEEEEEEEE
T ss_pred HHHHHHHHHc-CCCcEEEEEe
Confidence 5999999999 9999988753
No 196
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=69.76 E-value=2.7 Score=25.50 Aligned_cols=19 Identities=37% Similarity=0.459 Sum_probs=17.7
Q ss_pred HHHHHHHHHhccCCCceEEE
Q 037161 12 LKLLKNCYESINKEDGKLIV 31 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I 31 (99)
+.++..++++| +|||++.-
T Consensus 78 r~li~~l~~aL-kpgG~L~g 96 (136)
T 2km1_A 78 KKLISVLADSL-KPNGSLIG 96 (136)
T ss_dssp HHHHHHHHTTC-CTTCCEEC
T ss_pred HHHHHHHHHHh-CCCCEEEe
Confidence 78999999999 99999987
No 197
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=69.60 E-value=2.4 Score=26.65 Aligned_cols=23 Identities=17% Similarity=0.351 Sum_probs=17.0
Q ss_pred HHHHHHHHHHhccCCCceEEEEeee
Q 037161 11 CLKLLKNCYESINKEDGKLIVVEAV 35 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I~e~~ 35 (99)
..++++.+ +.| +|||.+++.+..
T Consensus 150 ~~~~~~~~-~~L-kpgG~lv~~~~~ 172 (221)
T 3u81_A 150 DTLLLEKC-GLL-RKGTVLLADNVI 172 (221)
T ss_dssp HHHHHHHT-TCC-CTTCEEEESCCC
T ss_pred HHHHHHhc-ccc-CCCeEEEEeCCC
Confidence 34567777 889 999988776554
No 198
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=69.52 E-value=2.4 Score=30.62 Aligned_cols=24 Identities=17% Similarity=0.228 Sum_probs=20.3
Q ss_pred HHHHHHHHHhccCCCceEEEEeeec
Q 037161 12 LKLLKNCYESINKEDGKLIVVEAVL 36 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~~~ 36 (99)
.+||+++.+.| +|||+|+..-..+
T Consensus 209 ~~iL~~a~~~L-kpGG~LvysTCs~ 232 (464)
T 3m6w_A 209 KALLAQASRLL-GPGGVLVYSTCTF 232 (464)
T ss_dssp HHHHHHHHTTE-EEEEEEEEEESCC
T ss_pred HHHHHHHHHhc-CCCcEEEEEeccC
Confidence 78999999999 9999998866543
No 199
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=68.06 E-value=10 Score=22.29 Aligned_cols=18 Identities=17% Similarity=0.171 Sum_probs=13.8
Q ss_pred HHHHHHHHHHcCCCeeEE
Q 037161 68 KHEFINLATAAGFSGIRF 85 (99)
Q Consensus 68 ~~e~~~ll~~aGf~~~~~ 85 (99)
..+..++++++||.+..+
T Consensus 137 ~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 137 AAKIINEFESRGYNVDAV 154 (183)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCeEEEE
Confidence 457888999999876655
No 200
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=67.65 E-value=1.7 Score=28.75 Aligned_cols=28 Identities=25% Similarity=0.310 Sum_probs=21.0
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEE
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~ 32 (99)
|+.|-+|.. ..++++++.| +|||.+++.
T Consensus 143 Ii~d~~dp~--~~~~~~~~~L-~pgG~lv~~ 170 (262)
T 2cmg_A 143 IFCLQEPDI--HRIDGLKRML-KEDGVFISV 170 (262)
T ss_dssp EEESSCCCH--HHHHHHHTTE-EEEEEEEEE
T ss_pred EEECCCChH--HHHHHHHHhc-CCCcEEEEE
Confidence 344555543 3899999999 999998885
No 201
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=67.63 E-value=2.2 Score=27.52 Aligned_cols=21 Identities=14% Similarity=0.102 Sum_probs=18.3
Q ss_pred HHHHHHHhccCCCceEEEEeee
Q 037161 14 LLKNCYESINKEDGKLIVVEAV 35 (99)
Q Consensus 14 iL~~~~~al~~pgg~l~I~e~~ 35 (99)
.++++++.| +|||++++....
T Consensus 160 ~l~~~~~~L-~pgG~l~~~~~~ 180 (269)
T 1p91_A 160 KAEELARVV-KPGGWVITATPG 180 (269)
T ss_dssp CHHHHHHHE-EEEEEEEEEEEC
T ss_pred hHHHHHHhc-CCCcEEEEEEcC
Confidence 589999999 999999998754
No 202
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=67.35 E-value=2.7 Score=28.35 Aligned_cols=23 Identities=13% Similarity=0.003 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHhccCCCceEEEEe
Q 037161 10 HCLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 10 ~~~~iL~~~~~al~~pgg~l~I~e 33 (99)
....+|+.+++.| +|||++++..
T Consensus 149 l~~~~l~~a~r~L-kpGG~~v~~~ 171 (290)
T 2xyq_A 149 FFTYLCGFIKQKL-ALGGSIAVKI 171 (290)
T ss_dssp HHHHHHHHHHHHE-EEEEEEEEEE
T ss_pred HHHHHHHHHHHhc-CCCcEEEEEE
Confidence 3568999999999 9999999854
No 203
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=67.27 E-value=0.79 Score=33.08 Aligned_cols=28 Identities=14% Similarity=0.121 Sum_probs=23.3
Q ss_pred cccCChHHHHHHHHHHHHhccCCCceEEE
Q 037161 3 LHAWSDEHCLKLLKNCYESINKEDGKLIV 31 (99)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I 31 (99)
++.|.++.....+.++++.| +|||++++
T Consensus 234 ~~~~~~e~~~~~l~~~~~~L-kpgG~li~ 261 (480)
T 3b3j_A 234 GYMLFNERMLESYLHAKKYL-KPSGNMFP 261 (480)
T ss_dssp HHHHTCHHHHHHHHHGGGGE-EEEEEEES
T ss_pred hHhcCcHHHHHHHHHHHHhc-CCCCEEEE
Confidence 35666778888899999999 99999885
No 204
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=67.26 E-value=4.8 Score=21.00 Aligned_cols=20 Identities=15% Similarity=0.036 Sum_probs=17.0
Q ss_pred cCHHHHHHHHHHcCCCeeEE
Q 037161 66 RTKHEFINLATAAGFSGIRF 85 (99)
Q Consensus 66 rt~~e~~~ll~~aGf~~~~~ 85 (99)
.+..|+.++|+++||..++.
T Consensus 5 ~~~~elik~L~~~G~~~~r~ 24 (70)
T 1whz_A 5 PRPEEVARKLRRLGFVERMA 24 (70)
T ss_dssp CCHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHCCCEEeCC
Confidence 46889999999999987753
No 205
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=67.07 E-value=13 Score=23.34 Aligned_cols=34 Identities=12% Similarity=0.082 Sum_probs=25.3
Q ss_pred Cc-eecCHHHHHHHHHHcCCCeeEEEEcCCCeeEEE
Q 037161 62 RG-KVRTKHEFINLATAAGFSGIRFQCFVCNSWVME 96 (99)
Q Consensus 62 ~g-~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie 96 (99)
|| .--.-.|++++|+++||+.++.+ +.++.-+++
T Consensus 17 GG~nkv~MadLr~~l~~lGf~~V~Ty-I~SGNvvF~ 51 (183)
T 2hiy_A 17 GGKNKVVMAELRQELTNLGLEKVESY-INSGNIFFT 51 (183)
T ss_dssp C-CCCCCHHHHHHHHHHHTCEEEEEE-TTTTEEEEE
T ss_pred CCCCcccHHHHHHHHHHcCCccceEE-EecCCEEEe
Confidence 44 45679999999999999999976 445555544
No 206
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=65.59 E-value=1.6 Score=26.90 Aligned_cols=21 Identities=14% Similarity=0.287 Sum_probs=18.8
Q ss_pred HHHHHHHHHHhccCCCceEEEE
Q 037161 11 CLKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I~ 32 (99)
...+++++++.| +|||.+++.
T Consensus 144 ~~~~l~~~~~~L-~~gG~l~~~ 164 (207)
T 1jsx_A 144 LNDMVSWCHHLP-GEQGRFYAL 164 (207)
T ss_dssp HHHHHHHHTTSE-EEEEEEEEE
T ss_pred HHHHHHHHHHhc-CCCcEEEEE
Confidence 468999999999 999999986
No 207
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=65.22 E-value=1.3 Score=29.95 Aligned_cols=22 Identities=5% Similarity=0.128 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhccCCCceEEEEe
Q 037161 11 CLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I~e 33 (99)
..++++++++.| +|||.+++.-
T Consensus 174 ~~~~l~~~~~~L-kpgG~lv~~~ 195 (314)
T 1uir_A 174 TVEFYRLVKAHL-NPGGVMGMQT 195 (314)
T ss_dssp SHHHHHHHHHTE-EEEEEEEEEE
T ss_pred HHHHHHHHHHhc-CCCcEEEEEc
Confidence 368899999999 9999998863
No 208
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=60.61 E-value=3.8 Score=27.19 Aligned_cols=20 Identities=15% Similarity=0.406 Sum_probs=18.1
Q ss_pred HHHHHHHHHhccCCCceEEEE
Q 037161 12 LKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~ 32 (99)
.++++++++.| +|||.+++.
T Consensus 172 ~~~l~~~~~~L-~pgG~lv~~ 191 (283)
T 2i7c_A 172 QNFYEKIYNAL-KPNGYCVAQ 191 (283)
T ss_dssp HHHHHHHHHHE-EEEEEEEEE
T ss_pred HHHHHHHHHhc-CCCcEEEEE
Confidence 68999999999 999998875
No 209
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=60.44 E-value=3.4 Score=27.35 Aligned_cols=20 Identities=10% Similarity=0.388 Sum_probs=18.0
Q ss_pred HHHHHHHHHhccCCCceEEEE
Q 037161 12 LKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~ 32 (99)
..+++++++.| +|||.+++.
T Consensus 173 ~~~l~~~~~~L-~pgG~lv~~ 192 (281)
T 1mjf_A 173 EEFYRYVYDAL-NNPGIYVTQ 192 (281)
T ss_dssp HHHHHHHHHHE-EEEEEEEEE
T ss_pred HHHHHHHHHhc-CCCcEEEEE
Confidence 68899999999 999988875
No 210
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=60.19 E-value=2.9 Score=29.12 Aligned_cols=25 Identities=20% Similarity=0.307 Sum_probs=19.7
Q ss_pred HHHHHHHHHhccCCCceEEEEeeecC
Q 037161 12 LKLLKNCYESINKEDGKLIVVEAVLP 37 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~~~~ 37 (99)
.+||+++.+.+ +|||+|+=.-.-+.
T Consensus 264 ~~iL~~a~~~l-kpGG~LVYsTCSl~ 288 (359)
T 4fzv_A 264 VQLLAAGLLAT-KPGGHVVYSTCSLS 288 (359)
T ss_dssp HHHHHHHHHTE-EEEEEEEEEESCCC
T ss_pred HHHHHHHHhcC-CCCcEEEEEeCCCc
Confidence 57999999999 99998776665443
No 211
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=59.85 E-value=3.3 Score=28.02 Aligned_cols=25 Identities=20% Similarity=0.449 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEee
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
++..+.|..+...| +||||+.|+-+
T Consensus 222 ~~l~~~l~~~~~~l-~~ggr~~visf 246 (301)
T 1m6y_A 222 ENLKEFLKKAEDLL-NPGGRIVVISF 246 (301)
T ss_dssp HHHHHHHHHGGGGE-EEEEEEEEEES
T ss_pred HHHHHHHHHHHHhh-CCCCEEEEEec
Confidence 34567888888999 99999999884
No 212
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=59.66 E-value=12 Score=25.54 Aligned_cols=24 Identities=25% Similarity=0.325 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhccCCCceEEEEee
Q 037161 10 HCLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 10 ~~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
...++|+++.+.| +|||.+++...
T Consensus 250 ~~~~ll~~~~~~L-kpgG~lli~~~ 273 (332)
T 2igt_A 250 HLPLMLDICREIL-SPKALGLVLTA 273 (332)
T ss_dssp HHHHHHHHHHHTB-CTTCCEEEEEE
T ss_pred HHHHHHHHHHHhc-CcCcEEEEEEC
Confidence 4578999999999 99998776553
No 213
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=56.46 E-value=13 Score=25.15 Aligned_cols=21 Identities=10% Similarity=0.365 Sum_probs=18.6
Q ss_pred HHHHHHHHHhccCCCceEEEEe
Q 037161 12 LKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e 33 (99)
..+++.+++.| +|||+++++-
T Consensus 297 ~~~~~~~~~~L-kpgG~l~i~t 317 (354)
T 3tma_A 297 WDFLRGALALL-PPGGRVALLT 317 (354)
T ss_dssp HHHHHHHHHTS-CTTCEEEEEE
T ss_pred HHHHHHHHHhc-CCCcEEEEEe
Confidence 67899999999 9999999963
No 214
>1cee_B Wiskott-aldrich syndrome protein WAsp; CDC42 actin regulator GTPase and the GTPase binding domain of ITS effector WAsp; HET: GCP; NMR {Homo sapiens}
Probab=55.91 E-value=5.4 Score=20.44 Aligned_cols=19 Identities=21% Similarity=0.317 Sum_probs=15.8
Q ss_pred CHHHHHHHHHHcCCCeeEE
Q 037161 67 TKHEFINLATAAGFSGIRF 85 (99)
Q Consensus 67 t~~e~~~ll~~aGf~~~~~ 85 (99)
-..+|+.+|.++|.+..++
T Consensus 34 ~pp~W~~ll~~sGIt~~e~ 52 (59)
T 1cee_B 34 LDPDLRSLFSRAGISEAQL 52 (59)
T ss_dssp CCHHHHHHHTTTTSCSSCC
T ss_pred CCHHHHHHHHHcCCCHHHH
Confidence 4689999999999886654
No 215
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=55.84 E-value=4.2 Score=26.88 Aligned_cols=20 Identities=20% Similarity=0.340 Sum_probs=17.6
Q ss_pred HHHHHHHHHhccCCCceEEEE
Q 037161 12 LKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~ 32 (99)
..+++++++.| +|||.+++.
T Consensus 169 ~~~~~~~~~~L-~pgG~lv~~ 188 (275)
T 1iy9_A 169 KGFYAGIAKAL-KEDGIFVAQ 188 (275)
T ss_dssp THHHHHHHHHE-EEEEEEEEE
T ss_pred HHHHHHHHHhc-CCCcEEEEE
Confidence 57899999999 999988774
No 216
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=55.72 E-value=4.5 Score=27.71 Aligned_cols=21 Identities=5% Similarity=0.148 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhccCCCceEEEE
Q 037161 11 CLKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I~ 32 (99)
...+++++++.| +|||.+++.
T Consensus 214 ~~~~l~~~~~~L-kpgG~lv~~ 234 (334)
T 1xj5_A 214 EKPFFQSVARAL-RPGGVVCTQ 234 (334)
T ss_dssp SHHHHHHHHHHE-EEEEEEEEE
T ss_pred HHHHHHHHHHhc-CCCcEEEEe
Confidence 478999999999 999988875
No 217
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=55.63 E-value=3.9 Score=27.76 Aligned_cols=21 Identities=24% Similarity=0.238 Sum_probs=16.9
Q ss_pred HHHHHHHHHhccCCCceEEEEe
Q 037161 12 LKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e 33 (99)
..+++++++.| +|||.+++..
T Consensus 202 ~~~l~~~~~~L-kpgG~lv~~~ 222 (314)
T 2b2c_A 202 QSYYELLRDAL-KEDGILSSQG 222 (314)
T ss_dssp --HHHHHHHHE-EEEEEEEEEC
T ss_pred HHHHHHHHhhc-CCCeEEEEEC
Confidence 78999999999 9999888753
No 218
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=55.53 E-value=4.6 Score=27.41 Aligned_cols=20 Identities=15% Similarity=0.406 Sum_probs=18.1
Q ss_pred HHHHHHHHHhccCCCceEEEE
Q 037161 12 LKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~ 32 (99)
.++++++++.| +|||.+++.
T Consensus 210 ~~~l~~~~~~L-kpgG~lv~~ 229 (321)
T 2pt6_A 210 QNFYEKIYNAL-KPNGYCVAQ 229 (321)
T ss_dssp HHHHHHHHHHE-EEEEEEEEE
T ss_pred HHHHHHHHHhc-CCCcEEEEE
Confidence 68999999999 999988875
No 219
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=55.38 E-value=4.3 Score=27.34 Aligned_cols=22 Identities=23% Similarity=0.166 Sum_probs=18.2
Q ss_pred HHHHHHHHHHhccCCCceEEEEe
Q 037161 11 CLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I~e 33 (99)
...+++++++.| +|||.+++..
T Consensus 188 ~~~~l~~~~~~L-kpgG~lv~~~ 209 (304)
T 2o07_A 188 KESYYQLMKTAL-KEDGVLCCQG 209 (304)
T ss_dssp -CHHHHHHHHHE-EEEEEEEEEE
T ss_pred HHHHHHHHHhcc-CCCeEEEEec
Confidence 357899999999 9999888754
No 220
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=55.10 E-value=5.4 Score=24.67 Aligned_cols=17 Identities=24% Similarity=0.432 Sum_probs=14.3
Q ss_pred HHHHHhccCCCceEEEEe
Q 037161 16 KNCYESINKEDGKLIVVE 33 (99)
Q Consensus 16 ~~~~~al~~pgg~l~I~e 33 (99)
+++++.| +|||++++.-
T Consensus 161 ~~~~~~L-~pgG~lv~~~ 177 (215)
T 2yxe_A 161 EPLIRQL-KDGGKLLMPV 177 (215)
T ss_dssp HHHHHTE-EEEEEEEEEE
T ss_pred HHHHHHc-CCCcEEEEEE
Confidence 4788999 9999999864
No 221
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=54.89 E-value=7.6 Score=26.80 Aligned_cols=25 Identities=16% Similarity=0.166 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEee
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
+...++++++.+.| +|||.+++...
T Consensus 302 ~~~~~~l~~~~~~L-kpgG~l~~~~~ 326 (382)
T 1wxx_A 302 RAYKEVNLRAIKLL-KEGGILATASC 326 (382)
T ss_dssp HHHHHHHHHHHHTE-EEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhc-CCCCEEEEEEC
Confidence 44677899999999 99999888764
No 222
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=54.48 E-value=5.4 Score=27.32 Aligned_cols=22 Identities=9% Similarity=0.372 Sum_probs=18.8
Q ss_pred HHHHHHHHHhccCCCceEEEEee
Q 037161 12 LKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
..++++|++.| +|||.+++.-.
T Consensus 180 ~efl~~~~r~L-kpgGvlv~~~~ 201 (317)
T 3gjy_A 180 VEFFEHCHRGL-APGGLYVANCG 201 (317)
T ss_dssp HHHHHHHHHHE-EEEEEEEEEEE
T ss_pred HHHHHHHHHhc-CCCcEEEEEec
Confidence 68999999999 99998887553
No 223
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=54.45 E-value=5.1 Score=24.65 Aligned_cols=17 Identities=18% Similarity=0.301 Sum_probs=13.8
Q ss_pred HHHHhccCCCceEEEEee
Q 037161 17 NCYESINKEDGKLIVVEA 34 (99)
Q Consensus 17 ~~~~al~~pgg~l~I~e~ 34 (99)
++++.| +|||++++.-.
T Consensus 159 ~~~~~L-~pgG~lv~~~~ 175 (210)
T 3lbf_A 159 ALMTQL-DEGGILVLPVG 175 (210)
T ss_dssp HHHHTE-EEEEEEEEEEC
T ss_pred HHHHhc-ccCcEEEEEEc
Confidence 578899 99999988543
No 224
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=53.61 E-value=6.4 Score=24.59 Aligned_cols=17 Identities=35% Similarity=0.552 Sum_probs=14.3
Q ss_pred HHHHhccCCCceEEEEee
Q 037161 17 NCYESINKEDGKLIVVEA 34 (99)
Q Consensus 17 ~~~~al~~pgg~l~I~e~ 34 (99)
++.+.| +|||++++...
T Consensus 150 ~~~~~L-~pgG~l~~~~~ 166 (231)
T 1vbf_A 150 KPYEQL-KEGGIMILPIG 166 (231)
T ss_dssp HHHHTE-EEEEEEEEEEC
T ss_pred HHHHHc-CCCcEEEEEEc
Confidence 578899 99999999753
No 225
>3aaf_A Werner syndrome ATP-dependent helicase; helix-turn-helix, winged-helix, protein-DNA complex, DNA-BIN helicase; HET: DNA; 1.90A {Homo sapiens} PDB: 2axl_A
Probab=53.56 E-value=6.7 Score=23.34 Aligned_cols=68 Identities=15% Similarity=0.017 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHH---cCCCeeE
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATA---AGFSGIR 84 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~---aGf~~~~ 84 (99)
++++++|+.+++.= ..-|.-.|+|.+.......- ...+| .+..+.-|+.++..+|+.++.+ .||=...
T Consensus 16 ~~AqkiLs~V~r~~-~rfG~~~iidvLrGs~~~ki-----~~~~~--~l~tfGigk~~s~~~w~~lirqLi~~G~L~~~ 86 (134)
T 3aaf_A 16 PQAFKLLSAVDILG-EKFGIGLPILFLRGSNSQRL-----ADQYR--RHSLFGTGKDQTESWWKAFSRQLITEGFLVEV 86 (134)
T ss_dssp HHHHHHHHHHHHTT-TCSCTHHHHHHHTTCCCTTS-----CGGGG--GSTTTTTTTTSCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHHHHc-CcccccchhhhhcCCcHHHH-----HHHhC--CCCccCCCCCCCHHHHHHHHHHHHHcCCceee
Confidence 46889999988752 45566677776554432211 11123 2333435899999999988874 5754443
No 226
>2lmc_A Bacterial RNA polymerase inhibitor; transferase, transcription; NMR {Enterobacteria phage T7} PDB: 2wnm_A
Probab=53.53 E-value=18 Score=19.74 Aligned_cols=25 Identities=36% Similarity=0.414 Sum_probs=18.2
Q ss_pred ecCHHHHHHHHH----HcCCCeeEEEEcC
Q 037161 65 VRTKHEFINLAT----AAGFSGIRFQCFV 89 (99)
Q Consensus 65 ~rt~~e~~~ll~----~aGf~~~~~~~~~ 89 (99)
.++.+|-.++.+ ++||.+.++.|-.
T Consensus 53 A~sLdEAlE~AE~eYeeaGF~V~RVRPev 81 (84)
T 2lmc_A 53 AETLDEALELAEWQYVPAGFEVTRVRPCV 81 (84)
T ss_dssp CSSHHHHHHHHHHTTGGGTCEEEEEEEEC
T ss_pred cccHHHHHHHHHHHhhhccceEEEecccc
Confidence 456666655555 8999999998853
No 227
>2lnh_A N-WAsp, neural wiskott-aldrich syndrome protein; protein complex, signaling protein-protein binding complex; NMR {Homo sapiens}
Probab=53.31 E-value=4 Score=21.48 Aligned_cols=17 Identities=29% Similarity=0.352 Sum_probs=13.8
Q ss_pred HHHHHHHHHHcCCCeeE
Q 037161 68 KHEFINLATAAGFSGIR 84 (99)
Q Consensus 68 ~~e~~~ll~~aGf~~~~ 84 (99)
..||+++|+.+|.+..+
T Consensus 24 p~eW~~ll~~sGIs~~~ 40 (65)
T 2lnh_A 24 DPELKNLFDMCGISEAQ 40 (65)
T ss_dssp CTTHHHHHHHHTCCHHH
T ss_pred CHHHHHHHHHcCCCHHH
Confidence 46999999999987543
No 228
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=53.13 E-value=10 Score=24.03 Aligned_cols=30 Identities=3% Similarity=0.254 Sum_probs=22.9
Q ss_pred ccCC-hHHHHHHHHHHHHhccCCCceEEEEee
Q 037161 4 HAWS-DEHCLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 4 Hdw~-d~~~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
.||. ......|.+++.+.+ ++|+.++.+|.
T Consensus 127 ~Dw~~~~~~~~i~~~v~~~~-~~g~IiL~Hd~ 157 (216)
T 2c71_A 127 NDWIPSTTAEQRAAAVINGV-RDGTIILLHDV 157 (216)
T ss_dssp STTCTTSCHHHHHHHHHHHC-CTTBEEEEESC
T ss_pred ccccCCCCHHHHHHHHHhcC-CCCcEEEEECC
Confidence 3776 556778888888888 89887777764
No 229
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=53.07 E-value=7.6 Score=26.85 Aligned_cols=25 Identities=12% Similarity=0.206 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEee
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
.....+++++.+.| +|||.+++...
T Consensus 312 ~~~~~~l~~~~~~L-kpgG~lv~~~~ 336 (396)
T 2as0_A 312 RAYFNVNFAGLNLV-KDGGILVTCSC 336 (396)
T ss_dssp HHHHHHHHHHHTTE-EEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhc-CCCcEEEEEEC
Confidence 45678899999999 99998888764
No 230
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=52.90 E-value=3.5 Score=27.12 Aligned_cols=28 Identities=25% Similarity=0.382 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhccCCCceEEEEeeecCC
Q 037161 10 HCLKLLKNCYESINKEDGKLIVVEAVLPE 38 (99)
Q Consensus 10 ~~~~iL~~~~~al~~pgg~l~I~e~~~~~ 38 (99)
...++++++.+.| +|||.+++.+....+
T Consensus 197 ~~~~~l~~~~~~L-kpgG~l~~s~~~~~~ 224 (272)
T 3a27_A 197 KTHKFLDKTFEFL-KDRGVIHYHETVAEK 224 (272)
T ss_dssp SGGGGHHHHHHHE-EEEEEEEEEEEEEGG
T ss_pred cHHHHHHHHHHHc-CCCCEEEEEEcCccc
Confidence 4567899999999 999999988876543
No 231
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=52.76 E-value=7.6 Score=25.59 Aligned_cols=22 Identities=14% Similarity=0.107 Sum_probs=17.7
Q ss_pred HHHHHHHHHhccCCCc--eEEEEee
Q 037161 12 LKLLKNCYESINKEDG--KLIVVEA 34 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg--~l~I~e~ 34 (99)
.++|+.+++.| +||| .+++..+
T Consensus 163 l~~L~~~~r~L-kpGG~~~fv~kv~ 186 (265)
T 2oxt_A 163 IKILELLEKWK-VKNPSADFVVKVL 186 (265)
T ss_dssp HHHHHHHHHHH-HHCTTCEEEEEES
T ss_pred HHHHHHHHHHh-ccCCCeEEEEEeC
Confidence 35899999999 9999 7777443
No 232
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=51.61 E-value=5.4 Score=25.88 Aligned_cols=50 Identities=6% Similarity=-0.102 Sum_probs=35.2
Q ss_pred HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEc
Q 037161 11 CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~ 88 (99)
...+++.+++.| +|||+++++..... ... ..++...++..||+..++.++
T Consensus 163 ~~~ll~~~~~~L-kpgG~l~~~~g~~~-------~~e--------------------~~~~~~~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 163 LCVLSELLLPFL-EVGGAAVAMKGPRV-------EEE--------------------LAPLPPALERLGGRLGEVLAL 212 (249)
T ss_dssp HHHHHHHHGGGE-EEEEEEEEEECSCC-------HHH--------------------HTTHHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHHHHHc-CCCeEEEEEeCCCc-------HHH--------------------HHHHHHHHHHcCCeEEEEEEe
Confidence 357899999999 99999998653211 000 225667777889999888765
No 233
>2h80_A STAR-related lipid transfer protein 13; helical bundle, lipid binding protein; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2jw2_A
Probab=51.35 E-value=5.5 Score=21.73 Aligned_cols=20 Identities=25% Similarity=0.247 Sum_probs=15.8
Q ss_pred eecCHHHHHHHHHHcCCCee
Q 037161 64 KVRTKHEFINLATAAGFSGI 83 (99)
Q Consensus 64 ~~rt~~e~~~ll~~aGf~~~ 83 (99)
.+....|-..||.+|||...
T Consensus 17 ~E~eA~eAC~WLRaaGFPQY 36 (81)
T 2h80_A 17 QEIEAKEACDWLRAAGFPQY 36 (81)
T ss_dssp HHHHHHHHHHHHHHTTCHHH
T ss_pred hHHHHHHHHHHHHHcCCcHH
Confidence 45667788999999999653
No 234
>1vfj_A Nitrogen regulatory protein P-II; structural genomics, signal transducing protein, riken structural genomics/proteomics initiative, RSGI; 1.70A {Thermus thermophilus} SCOP: d.58.5.1 PDB: 1ufl_A 1v3s_A* 1v9o_A* 1v3r_A
Probab=50.72 E-value=22 Score=20.29 Aligned_cols=26 Identities=19% Similarity=0.373 Sum_probs=20.5
Q ss_pred ChHHHHHHHHHHHHhccCC----CceEEEEe
Q 037161 7 SDEHCLKLLKNCYESINKE----DGKLIVVE 33 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~~p----gg~l~I~e 33 (99)
+|++..++++.+.+++ .. +|+++|.+
T Consensus 66 ~de~v~~vv~~I~~~~-~tg~~GdGkiFV~p 95 (116)
T 1vfj_A 66 SEPFVKPTVEAILKAA-RTGEVGDGKIFVLP 95 (116)
T ss_dssp CGGGHHHHHHHHHHHH-CCSSTTCCEEEEEE
T ss_pred cHHHHHHHHHHHHHHh-cCCCCCCEEEEEEE
Confidence 5778888888888887 43 68999877
No 235
>3fpn_B Geobacillus stearothermophilus UVRB interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=49.95 E-value=6.5 Score=22.47 Aligned_cols=28 Identities=4% Similarity=-0.001 Sum_probs=23.4
Q ss_pred CceecCHHHHHHHHHHcCCCeeEEEEcC
Q 037161 62 RGKVRTKHEFINLATAAGFSGIRFQCFV 89 (99)
Q Consensus 62 ~g~~rt~~e~~~ll~~aGf~~~~~~~~~ 89 (99)
-|...+.+++.+.|.+.|++.+......
T Consensus 19 ~G~~i~~~~l~~~L~~~GY~r~~~v~~~ 46 (106)
T 3fpn_B 19 VGMEIERNALLRRLVDIQYDRNDIDFRR 46 (106)
T ss_dssp TTCBCCHHHHHHHHHHTTCEECTTCCCT
T ss_pred CCCCcCHHHHHHHHHHcCCEECCccCCc
Confidence 6899999999999999999887654433
No 236
>2ns1_B Nitrogen regulatory protein P-II 2; protein-protein complex, membrane protein, ammonia, channel, inhibitor, signal protein, ADP, BOG; HET: BOG ADP; 1.96A {Escherichia coli} SCOP: d.58.5.1 PDB: 1gnk_A 2nuu_G* 2gnk_A*
Probab=49.81 E-value=18 Score=20.76 Aligned_cols=27 Identities=22% Similarity=0.363 Sum_probs=20.5
Q ss_pred ChHHHHHHHHHHHHhccCC----CceEEEEee
Q 037161 7 SDEHCLKLLKNCYESINKE----DGKLIVVEA 34 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~~p----gg~l~I~e~ 34 (99)
+|+++.++++.+.+++ .. +|+++|.+-
T Consensus 70 ~de~v~~vv~~I~~~~-~tg~~GdGkiFV~pV 100 (116)
T 2ns1_B 70 ADDQLDEVIDIVSKAA-YTGKIGDGKIFVAEL 100 (116)
T ss_dssp EGGGHHHHHHHHHHHH-CCSSTTCCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHh-cCCCCCCEEEEEEEh
Confidence 4677888888888877 43 589999874
No 237
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=48.00 E-value=3.2 Score=25.99 Aligned_cols=20 Identities=20% Similarity=0.346 Sum_probs=16.7
Q ss_pred HHHHHHHHhccCCCceEEEEe
Q 037161 13 KLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 13 ~iL~~~~~al~~pgg~l~I~e 33 (99)
.+++++++.| +|||++++..
T Consensus 163 ~~~~~~~~~L-kpgG~lv~~~ 182 (226)
T 1i1n_A 163 VVPQALIDQL-KPGGRLILPV 182 (226)
T ss_dssp SCCHHHHHTE-EEEEEEEEEE
T ss_pred HHHHHHHHhc-CCCcEEEEEE
Confidence 4567889999 9999999864
No 238
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=47.86 E-value=10 Score=25.21 Aligned_cols=20 Identities=15% Similarity=0.507 Sum_probs=17.0
Q ss_pred HHHHHHHHHhccCCCceEEEE
Q 037161 12 LKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~ 32 (99)
..+++.+++.| +|||.+++.
T Consensus 77 ~~~~~~~~rvL-k~~G~l~i~ 96 (297)
T 2zig_A 77 DRVWREVFRLL-VPGGRLVIV 96 (297)
T ss_dssp HHHHHHHHHHE-EEEEEEEEE
T ss_pred HHHHHHHHHHc-CCCcEEEEE
Confidence 56889999999 999998774
No 239
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=47.83 E-value=27 Score=17.80 Aligned_cols=22 Identities=14% Similarity=0.015 Sum_probs=17.5
Q ss_pred ecCHHHHHHHHHHcCCCeeEEE
Q 037161 65 VRTKHEFINLATAAGFSGIRFQ 86 (99)
Q Consensus 65 ~rt~~e~~~ll~~aGf~~~~~~ 86 (99)
-.+.++-+++|+++||+.....
T Consensus 15 G~~~~~A~~~L~~~Gl~~~~~~ 36 (71)
T 3ouv_A 15 GQTVDVAQKNMNVYGFTKFSQA 36 (71)
T ss_dssp TCBHHHHHHHHHHTTCCCEEEE
T ss_pred CCCHHHHHHHHHHCCCeEEEEE
Confidence 3567889999999999876543
No 240
>1hwu_A PII protein; herbaspirillum seropedicae PII, beta-alpha-beta motif, signal transduction protein, signaling protein; 2.10A {Herbaspirillum seropedicae} SCOP: d.58.5.1
Probab=47.21 E-value=27 Score=19.71 Aligned_cols=26 Identities=23% Similarity=0.386 Sum_probs=20.1
Q ss_pred ChHHHHHHHHHHHHhccCC----CceEEEEe
Q 037161 7 SDEHCLKLLKNCYESINKE----DGKLIVVE 33 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~~p----gg~l~I~e 33 (99)
+|++..++++.+.+++ .. +|+++|.+
T Consensus 66 ~d~~v~~vv~~I~~~~-~tg~~GdGkiFV~~ 95 (112)
T 1hwu_A 66 DDKVVEQAVDAIIKAA-RTGKIGDGKIFVQE 95 (112)
T ss_dssp CGGGHHHHHHHHHHHH-CCSSTTCCEEEEEE
T ss_pred cHHHHHHHHHHHHHHh-cCCCCCCEEEEEEE
Confidence 5777888888888877 43 58999877
No 241
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=47.20 E-value=7.5 Score=24.06 Aligned_cols=25 Identities=8% Similarity=-0.016 Sum_probs=18.1
Q ss_pred HHHHHHHHH--HHhccCCCceEEEEeee
Q 037161 10 HCLKLLKNC--YESINKEDGKLIVVEAV 35 (99)
Q Consensus 10 ~~~~iL~~~--~~al~~pgg~l~I~e~~ 35 (99)
....+++.+ .+.| +|||.+++....
T Consensus 139 ~~~~~l~~~~~~~~L-kpgG~l~i~~~~ 165 (201)
T 2ift_A 139 LAEQAISLLCENNWL-KPNALIYVETEK 165 (201)
T ss_dssp HHHHHHHHHHHTTCE-EEEEEEEEEEES
T ss_pred cHHHHHHHHHhcCcc-CCCcEEEEEECC
Confidence 456778888 4469 999998876543
No 242
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=46.53 E-value=11 Score=25.02 Aligned_cols=21 Identities=14% Similarity=0.077 Sum_probs=17.1
Q ss_pred HHHHHHHHHhccCCCc--eEEEEe
Q 037161 12 LKLLKNCYESINKEDG--KLIVVE 33 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg--~l~I~e 33 (99)
.++|+.+++.| +||| .+++..
T Consensus 171 l~~L~~~~r~L-kpGG~~~~v~~~ 193 (276)
T 2wa2_A 171 LTVLNVISRWL-EYNQGCGFCVKV 193 (276)
T ss_dssp HHHHHHHHHHH-HHSTTCEEEEEE
T ss_pred HHHHHHHHHHh-ccCCCcEEEEEe
Confidence 35899999999 9999 777743
No 243
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=45.23 E-value=16 Score=21.68 Aligned_cols=25 Identities=4% Similarity=0.017 Sum_probs=17.8
Q ss_pred HHHHHHHHHH--HhccCCCceEEEEeee
Q 037161 10 HCLKLLKNCY--ESINKEDGKLIVVEAV 35 (99)
Q Consensus 10 ~~~~iL~~~~--~al~~pgg~l~I~e~~ 35 (99)
....+++.+. +.| +|||.+++....
T Consensus 114 ~~~~~~~~l~~~~~L-~~gG~l~~~~~~ 140 (177)
T 2esr_A 114 TIVATIEALAAKNLL-SEQVMVVCETDK 140 (177)
T ss_dssp HHHHHHHHHHHTTCE-EEEEEEEEEEET
T ss_pred hHHHHHHHHHhCCCc-CCCcEEEEEECC
Confidence 3455666666 889 999998886543
No 244
>3t9z_A GLNK3, nitrogen regulatory protein P-II (GLNB-3); PII-family, AMT3, signaling protein; HET: FLC; 1.82A {Archaeoglobus fulgidus} SCOP: d.58.5.0 PDB: 3ta0_A* 3ta1_A* 3ta2_A* 3o8w_A
Probab=45.14 E-value=29 Score=20.09 Aligned_cols=27 Identities=19% Similarity=0.347 Sum_probs=20.8
Q ss_pred ChHHHHHHHHHHHHhccC---CC-ceEEEEee
Q 037161 7 SDEHCLKLLKNCYESINK---ED-GKLIVVEA 34 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~~---pg-g~l~I~e~ 34 (99)
+|+++.++++-+.+++ . +| |+++|.+-
T Consensus 66 ~de~ve~Vv~~I~~~a-~TG~~GDGkIFV~~V 96 (118)
T 3t9z_A 66 SDDAVDEVVEAIVSSA-RTGKFGDGRIFVIPV 96 (118)
T ss_dssp CGGGHHHHHHHHHHHH-CCSSTTCCEEEEEEC
T ss_pred ChHHHHHHHHHHHHHh-cCCCCCCeEEEEEEh
Confidence 5777888888888887 4 43 89999873
No 245
>3czq_A Putative polyphosphate kinase 2; structural genomics, APC6299, PSI-2, structure initiative; HET: MSE GOL; 2.23A {Sinorhizobium meliloti}
Probab=45.06 E-value=17 Score=24.87 Aligned_cols=66 Identities=6% Similarity=0.080 Sum_probs=37.2
Q ss_pred HHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEE
Q 037161 13 KLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQ 86 (99)
Q Consensus 13 ~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~ 86 (99)
..|.+..++| |..|.++|+|......-. +.......+..-. ....+...+|+.++...|..++++.
T Consensus 131 ~yl~R~~~~L-P~~G~IvIfDRswYs~v~---~~rv~g~~~~~e~----~~~~~~In~FE~~L~~~G~~~lKf~ 196 (304)
T 3czq_A 131 WYFQRYVATF-PTAGEFVLFDRSWYNRAG---VEPVMGFCTPDQY----EQFLKEAPRFEEMIANEGIHLFKFW 196 (304)
T ss_dssp CTTHHHHTTC-CCTTCEEEEEECGGGGTT---HHHHHTSSCHHHH----HHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred hHHHHHHHhc-ccCCeEEEEECCcchHHH---HHHHhcCCCHHHH----HHHHHHHHHHHHHHHhCCCeeEEEE
Confidence 3567888999 999999999976553311 1110000000000 0133455667778888897777664
No 246
>2jso_A Polymyxin resistance protein PMRD; antibiotic resistance, transcription, signaling Pro; NMR {Escherichia coli}
Probab=45.04 E-value=14 Score=20.41 Aligned_cols=18 Identities=17% Similarity=0.220 Sum_probs=16.2
Q ss_pred CceecCHHHHHHHHHHcC
Q 037161 62 RGKVRTKHEFINLATAAG 79 (99)
Q Consensus 62 ~g~~rt~~e~~~ll~~aG 79 (99)
..+.|+.+||+.+.+.+|
T Consensus 68 ~As~Ys~~eW~~~~~~~~ 85 (88)
T 2jso_A 68 SASSYSPDEWERQCKVAG 85 (88)
T ss_dssp EEEECCHHHHHHHHHHTT
T ss_pred eccccCHHHHHHHHhhcc
Confidence 578999999999999877
No 247
>1f3m_A Serine/threonine-protein kinase PAK-alpha; kinase domain, autoinhibitory fragment, homodimer, transferase; 2.30A {Homo sapiens} SCOP: j.66.1.1 PDB: 1e0a_B* 1ees_B
Probab=44.84 E-value=12 Score=20.32 Aligned_cols=21 Identities=5% Similarity=0.086 Sum_probs=16.1
Q ss_pred ecCHHHHHHHHHHcCCCeeEE
Q 037161 65 VRTKHEFINLATAAGFSGIRF 85 (99)
Q Consensus 65 ~rt~~e~~~ll~~aGf~~~~~ 85 (99)
.--..||+.+|..+|.+..++
T Consensus 28 ~GlP~eW~~ll~~sGIs~~e~ 48 (80)
T 1f3m_A 28 TGMPEQWARLLQTSNITKSEQ 48 (80)
T ss_dssp ESCCHHHHHHHHTSCCCHHHH
T ss_pred CCCCHHHHHHHHHcCCCHHHH
Confidence 334689999999999876543
No 248
>3dfe_A Putative PII-like signaling protein; YP_323533.1, structur genomics, joint center for structural genomics, JCSG; 2.35A {Anabaena variabilis atcc 29413} SCOP: d.58.5.0
Probab=44.82 E-value=40 Score=19.32 Aligned_cols=28 Identities=18% Similarity=0.164 Sum_probs=21.0
Q ss_pred ChHHHHHHHHHHHH-hccCCCceEEEEee
Q 037161 7 SDEHCLKLLKNCYE-SINKEDGKLIVVEA 34 (99)
Q Consensus 7 ~d~~~~~iL~~~~~-al~~pgg~l~I~e~ 34 (99)
+|+.+.+++..+.+ ++++-+|+++|.|.
T Consensus 69 ~de~vd~vv~~I~~~~~t~~~G~ifVsdV 97 (111)
T 3dfe_A 69 NREMAEKIADQVAIKFFTDYAGIIYICEA 97 (111)
T ss_dssp SHHHHHHHHHHHHHHHTTTSCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhhCCCCEEEEEEEe
Confidence 48889999999855 55334688888885
No 249
>3ncq_A Nitrogen regulatory protein P-II (GLNB-2); PII signaling, nucleotide binding, GLNK, signaling Pro; HET: ATP; 1.24A {Archaeoglobus fulgidus} SCOP: d.58.5.0 PDB: 3ncp_A* 3ncr_A*
Probab=44.79 E-value=30 Score=20.09 Aligned_cols=28 Identities=14% Similarity=0.260 Sum_probs=20.7
Q ss_pred ChHHHHHHHHHHHHhcc--CCC-ceEEEEee
Q 037161 7 SDEHCLKLLKNCYESIN--KED-GKLIVVEA 34 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~--~pg-g~l~I~e~ 34 (99)
+|+++.++++-+.+++. .+| |+++|.+-
T Consensus 66 ~de~ve~vv~~I~~~a~TG~~GDGkIFV~~V 96 (119)
T 3ncq_A 66 KDDAVEEVIGLIVNSAFTGSPGDGKIFIIPV 96 (119)
T ss_dssp CGGGHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCCEEEEEEh
Confidence 57778888888888772 234 99999873
No 250
>2eg2_A Nitrogen regulatory protein P-II; structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: ATP; 1.72A {Aquifex aeolicus} PDB: 2eg1_A* 2z0g_A 2pii_A 1pil_A
Probab=44.38 E-value=32 Score=19.44 Aligned_cols=28 Identities=21% Similarity=0.471 Sum_probs=20.5
Q ss_pred ChHHHHHHHHHHHHhcc--CC-CceEEEEee
Q 037161 7 SDEHCLKLLKNCYESIN--KE-DGKLIVVEA 34 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~--~p-gg~l~I~e~ 34 (99)
+|++..++++.+.+++. .+ +|+++|.+-
T Consensus 66 ~d~~v~~vv~~I~~~~~tg~~GdGkiFV~pV 96 (112)
T 2eg2_A 66 RDEDVEKVVETIVKTAQTGRVGDGKIFIIPV 96 (112)
T ss_dssp CGGGHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 57778888888888772 24 489999873
No 251
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=44.29 E-value=16 Score=24.10 Aligned_cols=19 Identities=5% Similarity=0.221 Sum_probs=16.8
Q ss_pred HHHHHHHH-HhccCCCceEEE
Q 037161 12 LKLLKNCY-ESINKEDGKLIV 31 (99)
Q Consensus 12 ~~iL~~~~-~al~~pgg~l~I 31 (99)
..+++++. +.+ +|||.+++
T Consensus 228 l~~~~~i~~~~l-~pgG~l~~ 247 (284)
T 1nv8_A 228 LDFYREFFGRYD-TSGKIVLM 247 (284)
T ss_dssp CHHHHHHHHHCC-CTTCEEEE
T ss_pred HHHHHHHHHhcC-CCCCEEEE
Confidence 37999999 999 99998886
No 252
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=43.91 E-value=11 Score=27.01 Aligned_cols=24 Identities=21% Similarity=0.429 Sum_probs=19.9
Q ss_pred HHHHHHHHHhccCCCceEEEEeeec
Q 037161 12 LKLLKNCYESINKEDGKLIVVEAVL 36 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~~~ 36 (99)
.+||+++.+.| +|||+|+..-..+
T Consensus 214 ~~iL~~a~~~L-kpGG~LvYsTCs~ 237 (456)
T 3m4x_A 214 QEILSSAIKML-KNKGQLIYSTCTF 237 (456)
T ss_dssp HHHHHHHHHTE-EEEEEEEEEESCC
T ss_pred HHHHHHHHHhc-CCCcEEEEEEeec
Confidence 38999999999 9999998766543
No 253
>4aff_A Nitrogen regulatory protein P-II; signaling protein; HET: ATP FLC; 1.05A {Synechococcus elongatus} SCOP: d.58.5.1 PDB: 2xun_A* 2xul_A* 2xzw_A* 2xbp_A* 2v5h_G* 2jj4_D* 2xg8_A 1qy7_A 3n5b_A* 1ul3_A
Probab=43.79 E-value=29 Score=20.01 Aligned_cols=27 Identities=19% Similarity=0.373 Sum_probs=20.8
Q ss_pred ChHHHHHHHHHHHHhccC---C-CceEEEEee
Q 037161 7 SDEHCLKLLKNCYESINK---E-DGKLIVVEA 34 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~~---p-gg~l~I~e~ 34 (99)
+|+++.++++-+.+++ . + +|+++|.+-
T Consensus 66 ~d~~ve~vv~~I~~~a-~Tg~~GDGkIFV~~V 96 (116)
T 4aff_A 66 EDAQVDTVIDKIVAAA-RTGENGDGKIFVSPV 96 (116)
T ss_dssp CGGGHHHHHHHHHHHH-CCSSTTCEEEEEEEC
T ss_pred cHHHHHHHHHHHHHHh-cCCCCCCeEEEEEEh
Confidence 5778888888888887 4 3 389999873
No 254
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=43.60 E-value=10 Score=23.88 Aligned_cols=17 Identities=35% Similarity=0.442 Sum_probs=13.8
Q ss_pred HHHHHhccCCCceEEEEe
Q 037161 16 KNCYESINKEDGKLIVVE 33 (99)
Q Consensus 16 ~~~~~al~~pgg~l~I~e 33 (99)
+++.+.| +|||++++.-
T Consensus 173 ~~~~~~L-~pgG~lvi~~ 189 (235)
T 1jg1_A 173 EPLIEQL-KIGGKLIIPV 189 (235)
T ss_dssp HHHHHTE-EEEEEEEEEE
T ss_pred HHHHHhc-CCCcEEEEEE
Confidence 3678899 9999998854
No 255
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=43.56 E-value=4.3 Score=25.41 Aligned_cols=20 Identities=30% Similarity=0.380 Sum_probs=16.5
Q ss_pred HHHHHHHhccCCCceEEEEee
Q 037161 14 LLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 14 iL~~~~~al~~pgg~l~I~e~ 34 (99)
+++++.+.| +|||++++.-.
T Consensus 175 ~~~~~~~~L-kpgG~lv~~~~ 194 (227)
T 2pbf_A 175 LPEILVDLL-AENGKLIIPIE 194 (227)
T ss_dssp CCHHHHHHE-EEEEEEEEEEE
T ss_pred HHHHHHHhc-CCCcEEEEEEc
Confidence 568889999 99999988643
No 256
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=43.50 E-value=13 Score=21.89 Aligned_cols=29 Identities=31% Similarity=0.485 Sum_probs=23.9
Q ss_pred cccCChHHHHHHHHHHHHhccCCCceEEEEe
Q 037161 3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e 33 (99)
+|-|..++.-++++++.+. .+.|.++-+|
T Consensus 67 l~~WKp~eVdkm~~k~~q~--~~dGl~iYCD 95 (126)
T 2rbg_A 67 LFLWKKNEVDIFLKNLEKS--EVDGLLVYCD 95 (126)
T ss_dssp EEEECGGGHHHHHHHHTTC--CCCEEEEEEC
T ss_pred EEEeCHHHHHHHHHHHHHh--CCCceEEEeC
Confidence 5789999999999999886 6777776655
No 257
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=43.42 E-value=13 Score=21.64 Aligned_cols=20 Identities=10% Similarity=0.210 Sum_probs=13.9
Q ss_pred HHHHH--HHhccCCCceEEEEee
Q 037161 14 LLKNC--YESINKEDGKLIVVEA 34 (99)
Q Consensus 14 iL~~~--~~al~~pgg~l~I~e~ 34 (99)
+++.+ ++.| +|||.+++...
T Consensus 127 ~~~~~~~~~~L-~~gG~~~~~~~ 148 (171)
T 1ws6_A 127 LFGELLASGLV-EAGGLYVLQHP 148 (171)
T ss_dssp HHHHHHHHTCE-EEEEEEEEEEE
T ss_pred HHHHHHhhccc-CCCcEEEEEeC
Confidence 34444 4889 99998887554
No 258
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=42.86 E-value=11 Score=25.54 Aligned_cols=62 Identities=6% Similarity=-0.037 Sum_probs=36.7
Q ss_pred ccccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCC
Q 037161 2 ILHAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFS 81 (99)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~ 81 (99)
++|...+++-...+ ++.++| +|+|.++-.+.-.=.++++ .| .+.-.++|++++.+.|..
T Consensus 207 ti~~Le~q~kg~g~-~ll~aL-~~~~vvVSfp~ksl~Grs~--------gm-----------~~~Y~~~~e~~~~~~g~~ 265 (281)
T 3lcv_B 207 TLPCLETQQRGSGW-EVIDIV-NSPNIVVTFPTKSLGQRSK--------GM-----------FQNYSQSFESQARERSCR 265 (281)
T ss_dssp CHHHHHHHSTTHHH-HHHHHS-SCSEEEEEEECC---------------CH-----------HHHHHHHHHHHHHHHTCC
T ss_pred HHHHhhhhhhHHHH-HHHHHh-CCCCEEEeccchhhcCCCc--------ch-----------hhHHHHHHHHHHHhcCCc
Confidence 35666666666777 899999 9988777766511111111 01 112256889999999974
Q ss_pred eeE
Q 037161 82 GIR 84 (99)
Q Consensus 82 ~~~ 84 (99)
..+
T Consensus 266 ~~~ 268 (281)
T 3lcv_B 266 IQR 268 (281)
T ss_dssp EEE
T ss_pred eee
Confidence 444
No 259
>3l7p_A Putative nitrogen regulatory protein PII; SMU_1 transcription, transcription regulation; 2.00A {Streptococcus mutans} SCOP: d.58.5.1
Probab=42.57 E-value=35 Score=19.60 Aligned_cols=26 Identities=23% Similarity=0.443 Sum_probs=19.9
Q ss_pred ChHHHHHHHHHHHHhccCC----CceEEEEe
Q 037161 7 SDEHCLKLLKNCYESINKE----DGKLIVVE 33 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~~p----gg~l~I~e 33 (99)
+|+++.++++.+.+++ .. +|+++|.+
T Consensus 69 ~d~~ve~vv~~I~~~a-~tg~~GDGkIFV~~ 98 (115)
T 3l7p_A 69 HDAAVEEMITTISQAV-KTGEVGDGKIFVSP 98 (115)
T ss_dssp CGGGHHHHHHHHHHHH-CCC----CEEEEEE
T ss_pred cHHHHHHHHHHHHHHh-cCCCCCCcEEEEEE
Confidence 5777888888888887 43 38999987
No 260
>3mhy_A PII-like protein PZ; PII protein, alpha-beta protein, homotrimer, signaling prote; HET: PG6 ATP AKG MES; 1.40A {Azospirillum brasilense} SCOP: d.58.5.1 PDB: 3o5t_B*
Probab=42.12 E-value=29 Score=19.79 Aligned_cols=27 Identities=26% Similarity=0.522 Sum_probs=19.2
Q ss_pred ChHHHHHHHHHHHHhcc--CC-CceEEEEe
Q 037161 7 SDEHCLKLLKNCYESIN--KE-DGKLIVVE 33 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~--~p-gg~l~I~e 33 (99)
+|+++.++++-+.++.. .+ +|+++|.+
T Consensus 66 ~d~~v~~vv~~I~~~~~tg~~GdGkIfV~~ 95 (112)
T 3mhy_A 66 SDDQYEQVVEAIQKAANTGRIGDGKIFVLD 95 (112)
T ss_dssp CTTTHHHHHHHHHHHHCCSSTTCCEEEEEE
T ss_pred chHHHHHHHHHHHHHhcCCCCCCeEEEEEE
Confidence 46677777777777762 23 38999987
No 261
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=41.63 E-value=9.5 Score=25.90 Aligned_cols=21 Identities=10% Similarity=0.058 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHhccCCCceEE
Q 037161 9 EHCLKLLKNCYESINKEDGKLI 30 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~ 30 (99)
.....+|+++++.| +|||+++
T Consensus 148 ~~~~~~l~~~~~~L-kpgG~li 168 (340)
T 2fyt_A 148 SMLDSVLYAKNKYL-AKGGSVY 168 (340)
T ss_dssp CHHHHHHHHHHHHE-EEEEEEE
T ss_pred HHHHHHHHHHHhhc-CCCcEEE
Confidence 34667999999999 9999887
No 262
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=41.42 E-value=14 Score=22.77 Aligned_cols=24 Identities=8% Similarity=0.127 Sum_probs=17.0
Q ss_pred HHHHHHHHHHh--ccCCCceEEEEeee
Q 037161 11 CLKLLKNCYES--INKEDGKLIVVEAV 35 (99)
Q Consensus 11 ~~~iL~~~~~a--l~~pgg~l~I~e~~ 35 (99)
...+++.+.+. | +|||.+++....
T Consensus 137 ~~~~l~~l~~~~~L-~pgG~l~i~~~~ 162 (202)
T 2fpo_A 137 LEETINLLEDNGWL-ADEALIYVESEV 162 (202)
T ss_dssp HHHHHHHHHHTTCE-EEEEEEEEEEEG
T ss_pred HHHHHHHHHhcCcc-CCCcEEEEEECC
Confidence 45667777664 9 999988876543
No 263
>1mhm_B Adometdc, samdc, S-adenosylmethionine decarboxylase; covalent pyruvoyl group, lyase; 2.30A {Solanum tuberosum} SCOP: d.156.1.1
Probab=41.34 E-value=41 Score=17.95 Aligned_cols=29 Identities=7% Similarity=-0.122 Sum_probs=23.9
Q ss_pred CceecCHHHHHHHHHHcCCCeeEEEEcCC
Q 037161 62 RGKVRTKHEFINLATAAGFSGIRFQCFVC 90 (99)
Q Consensus 62 ~g~~rt~~e~~~ll~~aGf~~~~~~~~~~ 90 (99)
|=|.-+.++|.++|+.+.-+++.......
T Consensus 36 gLR~i~r~~w~~~L~~a~C~IlS~~sn~~ 64 (72)
T 1mhm_B 36 GLRSLSKAQLDEILGPAECTIVDNLSNDY 64 (72)
T ss_dssp CGGGCCHHHHHHHHHHHTCEEEEEEECSS
T ss_pred ccccCCHHHHHHHHhhcCCEEEEEecCCc
Confidence 44667789999999999999998877543
No 264
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=40.90 E-value=15 Score=25.67 Aligned_cols=24 Identities=17% Similarity=0.331 Sum_probs=20.0
Q ss_pred HHHHHHHHHHhccCCCceEEEEeee
Q 037161 11 CLKLLKNCYESINKEDGKLIVVEAV 35 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I~e~~ 35 (99)
-.++++.+.+.| +|||.|++....
T Consensus 305 ~~~ll~~a~~~L-kpGG~Lv~~s~s 328 (393)
T 4dmg_A 305 LVDLVREALRLL-AEEGFLWLSSCS 328 (393)
T ss_dssp HHHHHHHHHHTE-EEEEEEEEEECC
T ss_pred HHHHHHHHHHhc-CCCCEEEEEECC
Confidence 357899999999 999999877654
No 265
>3ce8_A Putative PII-like nitrogen regulatory protein; structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE; 2.40A {Shewanella baltica}
Probab=40.62 E-value=30 Score=20.27 Aligned_cols=26 Identities=12% Similarity=0.077 Sum_probs=20.3
Q ss_pred ChHHHHHHHHHHHHhccCCCc-eEEEEe
Q 037161 7 SDEHCLKLLKNCYESINKEDG-KLIVVE 33 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~~pgg-~l~I~e 33 (99)
+|+++.+++..+.++. +.|. +++|.+
T Consensus 86 ~d~~ve~vv~aI~~~a-~tg~IKIfV~p 112 (120)
T 3ce8_A 86 PAAQQAALLTALALVC-KHNPCRYWIMP 112 (120)
T ss_dssp EGGGHHHHHHHHHHHT-TTSCCEEEEEE
T ss_pred CHHHHHHHHHHHHHHc-CCCCEEEEEEE
Confidence 5788999999999998 7666 666654
No 266
>2dky_A RHO-GTPase-activating protein 7; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2gyt_A 2kap_A
Probab=40.52 E-value=9 Score=21.34 Aligned_cols=19 Identities=21% Similarity=0.209 Sum_probs=14.9
Q ss_pred ecCHHHHHHHHHHcCCCee
Q 037161 65 VRTKHEFINLATAAGFSGI 83 (99)
Q Consensus 65 ~rt~~e~~~ll~~aGf~~~ 83 (99)
+....|-..||.+|||...
T Consensus 20 E~eA~eAC~WLRaaGFPQY 38 (91)
T 2dky_A 20 QIEAKEACDWLRATGFPQY 38 (91)
T ss_dssp HHHHHHHHHHHHHHTCTTH
T ss_pred HHHHHHHHHHHHHcCChHH
Confidence 4456788999999999753
No 267
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=40.45 E-value=38 Score=23.10 Aligned_cols=30 Identities=7% Similarity=-0.245 Sum_probs=20.0
Q ss_pred HHHHHHHHHHcCCCeeEEEEcCCCeeEEEE
Q 037161 68 KHEFINLATAAGFSGIRFQCFVCNSWVMEF 97 (99)
Q Consensus 68 ~~e~~~ll~~aGf~~~~~~~~~~~~~vie~ 97 (99)
....++-|.+|||++.++...++-...+.|
T Consensus 228 ag~VRR~L~~aGF~V~k~~G~g~KReml~A 257 (308)
T 3vyw_A 228 SLSVRKSLLTLGFKVGSSREIGRKRKGTVA 257 (308)
T ss_dssp CHHHHHHHHHTTCEEEEEECC---CEEEEE
T ss_pred cHHHHHHHHHCCCEEEecCCCCCCCceeEE
Confidence 456788999999999998777654433333
No 268
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=40.21 E-value=14 Score=24.91 Aligned_cols=20 Identities=15% Similarity=0.059 Sum_probs=17.3
Q ss_pred HHHHHHHHHHhccCCCceEEE
Q 037161 11 CLKLLKNCYESINKEDGKLIV 31 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I 31 (99)
...+|+.+.+.| +|||+++.
T Consensus 124 ~~~~l~~~~~~L-kpgG~li~ 143 (328)
T 1g6q_1 124 MDTVLYARDHYL-VEGGLIFP 143 (328)
T ss_dssp HHHHHHHHHHHE-EEEEEEES
T ss_pred HHHHHHHHHhhc-CCCeEEEE
Confidence 567899999999 99999874
No 269
>1ej5_A WAsp, wiskott-aldrich syndrome protein; alpha helix, beta-hairpin turn, blood clotting; NMR {Homo sapiens} SCOP: a.68.1.1 PDB: 1t84_A* 2k42_A
Probab=40.10 E-value=17 Score=20.95 Aligned_cols=17 Identities=24% Similarity=0.341 Sum_probs=14.1
Q ss_pred HHHHHHHHHHcCCCeeE
Q 037161 68 KHEFINLATAAGFSGIR 84 (99)
Q Consensus 68 ~~e~~~ll~~aGf~~~~ 84 (99)
..+|+.+|..+|.+...
T Consensus 23 ppeWk~LL~~aGITe~e 39 (107)
T 1ej5_A 23 DPDLRSLFSRAGISEAQ 39 (107)
T ss_dssp CHHHHHHHHHTTCCHHH
T ss_pred CHHHHHHHHHcCCCHHH
Confidence 57999999999987543
No 270
>3bzq_A Nitrogen regulatory protein P-II; GLNB, GLNK, signal transdu protein, nucleotide-binding, transcription; 1.40A {Mycobacterium tuberculosis H37RV} PDB: 3lf0_A*
Probab=39.74 E-value=26 Score=19.88 Aligned_cols=28 Identities=25% Similarity=0.278 Sum_probs=19.0
Q ss_pred ChHHHHHHHHHHHHhcc--CC-CceEEEEee
Q 037161 7 SDEHCLKLLKNCYESIN--KE-DGKLIVVEA 34 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~--~p-gg~l~I~e~ 34 (99)
+|++..++++.+.+++. .| +|+++|.+-
T Consensus 68 ~de~v~~vv~~I~~~~~tg~~GdGkiFV~pV 98 (114)
T 3bzq_A 68 DDSIVDKVVDSIVRAARTGKIGDGKVWVSPV 98 (114)
T ss_dssp ETTTHHHHHHHHHHHHCCSSTTCCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 46667777777777761 23 589998773
No 271
>2gw8_A PII signal transduction protein; transcriptional regulation, neisse structural genomics, oxford protein production facility; 1.85A {Neisseria meningitidis}
Probab=39.71 E-value=32 Score=19.54 Aligned_cols=28 Identities=25% Similarity=0.370 Sum_probs=20.2
Q ss_pred ChHHHHHHHHHHHHhcc--CC-CceEEEEee
Q 037161 7 SDEHCLKLLKNCYESIN--KE-DGKLIVVEA 34 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~--~p-gg~l~I~e~ 34 (99)
+|+++.++++.+.+++. .+ +|+++|.+-
T Consensus 68 ~d~~v~~vv~~I~~~~~tg~~GdGkiFV~pV 98 (114)
T 2gw8_A 68 ADDAVERAIDVIVEVARSGKIGDGKIFVLPV 98 (114)
T ss_dssp EGGGHHHHHHHHHHHHCCSSTTCCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCEEEEEEEh
Confidence 46777888888888772 24 489999874
No 272
>2g7j_A Putative cytoplasmic protein; STR72, autostructure, structural genomics, PSI, protein STRU initiative; NMR {Salmonella typhimurium} SCOP: d.198.5.1
Probab=38.89 E-value=33 Score=19.94 Aligned_cols=20 Identities=20% Similarity=0.192 Sum_probs=17.1
Q ss_pred CHHHHHHHHHHcCCCeeEEE
Q 037161 67 TKHEFINLATAAGFSGIRFQ 86 (99)
Q Consensus 67 t~~e~~~ll~~aGf~~~~~~ 86 (99)
...|..+.|+.+||+...+.
T Consensus 4 RPDEVArVLEk~GF~~D~vt 23 (124)
T 2g7j_A 4 RPDEVARVLEKAGFTVDVVT 23 (124)
T ss_dssp CHHHHHHHHHHTTCEEEEEE
T ss_pred ChHHHHHHHHHcCceEEEee
Confidence 36799999999999988775
No 273
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=38.69 E-value=50 Score=18.23 Aligned_cols=33 Identities=9% Similarity=0.100 Sum_probs=23.9
Q ss_pred eecCHHHHHHHHHHcCCCeeEEEEc-CCCeeEEEE
Q 037161 64 KVRTKHEFINLATAAGFSGIRFQCF-VCNSWVMEF 97 (99)
Q Consensus 64 ~~rt~~e~~~ll~~aGf~~~~~~~~-~~~~~vie~ 97 (99)
..-|.++..++|.+.| ++.+++-. ..+++.+|.
T Consensus 17 ~~~te~~L~~lF~q~G-~V~~~~l~~~kGfaFVey 50 (89)
T 2wbr_A 17 AQIDGPTLRTLCMQHG-PLVSFHPYLNQGIALCKY 50 (89)
T ss_dssp TTCCCHHHHHHHHHHS-CEEEEEEETTTTEEEEEE
T ss_pred ccCCHHHHHHHHHhhC-CEEEEEEcCCCcEEEEEE
Confidence 3456788999999999 88777643 356777765
No 274
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=38.58 E-value=14 Score=24.60 Aligned_cols=18 Identities=28% Similarity=0.543 Sum_probs=14.7
Q ss_pred HHHHHhccCCCceEEEEee
Q 037161 16 KNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 16 ~~~~~al~~pgg~l~I~e~ 34 (99)
+++.+.| +|||++++...
T Consensus 159 ~~~~~~L-kpgG~lvi~~~ 176 (317)
T 1dl5_A 159 ETWFTQL-KEGGRVIVPIN 176 (317)
T ss_dssp HHHHHHE-EEEEEEEEEBC
T ss_pred HHHHHhc-CCCcEEEEEEC
Confidence 5678899 99999999743
No 275
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=38.41 E-value=7 Score=26.98 Aligned_cols=26 Identities=12% Similarity=0.018 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEeee
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVEAV 35 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e~~ 35 (99)
+....+|+.+++.| +|||.+++.+..
T Consensus 146 ~~~~~~l~~~~~~L-kpgG~li~~~~~ 171 (376)
T 3r0q_C 146 SMFDSVISARDRWL-KPTGVMYPSHAR 171 (376)
T ss_dssp CTHHHHHHHHHHHE-EEEEEEESSEEE
T ss_pred HHHHHHHHHHHhhC-CCCeEEEEecCe
Confidence 33667899999999 999999876653
No 276
>2o66_A PII protein; regulation of nitrogen and carbon metabolism, biosynthetic protein; HET: FLC; 1.90A {Arabidopsis thaliana} PDB: 2o67_A 2rd5_C*
Probab=38.08 E-value=34 Score=20.34 Aligned_cols=28 Identities=18% Similarity=0.370 Sum_probs=21.1
Q ss_pred ChHHHHHHHHHHHHhcc--CC-CceEEEEee
Q 037161 7 SDEHCLKLLKNCYESIN--KE-DGKLIVVEA 34 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~--~p-gg~l~I~e~ 34 (99)
+|+++.++++.+.+++. .+ +|+++|.+-
T Consensus 79 ~de~ve~Vv~~I~~~~~tg~~GdGkIFV~pV 109 (135)
T 2o66_A 79 KKDQVESVINTIIEGARTGEIGDGKIFVLPV 109 (135)
T ss_dssp EGGGHHHHHHHHHHHHCCSSTTCCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCEEEEEEEh
Confidence 57788888888888872 24 489999874
No 277
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=38.00 E-value=9.9 Score=22.64 Aligned_cols=21 Identities=5% Similarity=0.165 Sum_probs=14.5
Q ss_pred HHHHHH--HHhccCCCceEEEEee
Q 037161 13 KLLKNC--YESINKEDGKLIVVEA 34 (99)
Q Consensus 13 ~iL~~~--~~al~~pgg~l~I~e~ 34 (99)
..++.+ ++.| +|||.+++...
T Consensus 133 ~~~~~l~~~~~L-~~gG~l~~~~~ 155 (187)
T 2fhp_A 133 SQLEKMLERQLL-TNEAVIVCETD 155 (187)
T ss_dssp HHHHHHHHTTCE-EEEEEEEEEEE
T ss_pred HHHHHHHHhccc-CCCCEEEEEeC
Confidence 444454 6778 99998887544
No 278
>1ny8_A Protein YRBA; structure, autoassign, autostructure, NESG, structural genomics, PSI, protein structure initiative; NMR {Escherichia coli} SCOP: d.52.6.1
Probab=37.42 E-value=24 Score=19.89 Aligned_cols=18 Identities=28% Similarity=0.276 Sum_probs=15.7
Q ss_pred eecCHHHHHHHHHHcCCC
Q 037161 64 KVRTKHEFINLATAAGFS 81 (99)
Q Consensus 64 ~~rt~~e~~~ll~~aGf~ 81 (99)
+.+|.+||.+.-...||-
T Consensus 73 ~t~TP~Ew~~~~~~~~~~ 90 (97)
T 1ny8_A 73 KAYTPAEWARDRKLNGFL 90 (97)
T ss_dssp EECCHHHHHHHHHTTSSS
T ss_pred EecChHHHHhhhhhcchh
Confidence 799999999988888874
No 279
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=37.09 E-value=26 Score=18.78 Aligned_cols=18 Identities=17% Similarity=0.309 Sum_probs=15.5
Q ss_pred cCHHHHHHHHHHcCCCee
Q 037161 66 RTKHEFINLATAAGFSGI 83 (99)
Q Consensus 66 rt~~e~~~ll~~aGf~~~ 83 (99)
-+.+++.+-|+++||+++
T Consensus 61 id~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 61 TPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp CCHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHcCCEee
Confidence 467889999999999875
No 280
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=37.00 E-value=19 Score=24.33 Aligned_cols=22 Identities=27% Similarity=0.406 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHhccCCCceEEEE
Q 037161 10 HCLKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 10 ~~~~iL~~~~~al~~pgg~l~I~ 32 (99)
....+|+.+++.| +|||.++|.
T Consensus 62 ~l~~~l~~~~rvL-k~~G~i~i~ 83 (323)
T 1boo_A 62 WFLSFAKVVNKKL-KPDGSFVVD 83 (323)
T ss_dssp HHHHHHHHHHHHE-EEEEEEEEE
T ss_pred HHHHHHHHHHHHC-cCCcEEEEE
Confidence 4678889999999 999988884
No 281
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=36.59 E-value=15 Score=24.97 Aligned_cols=22 Identities=14% Similarity=0.102 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHhccCCCceEEE
Q 037161 9 EHCLKLLKNCYESINKEDGKLIV 31 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I 31 (99)
+....+|+.+.+.| +|||+++.
T Consensus 150 ~~~~~~l~~~~r~L-kpgG~li~ 171 (349)
T 3q7e_A 150 SMLNTVLHARDKWL-APDGLIFP 171 (349)
T ss_dssp CCHHHHHHHHHHHE-EEEEEEES
T ss_pred hhHHHHHHHHHHhC-CCCCEEcc
Confidence 34667899999999 99999873
No 282
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=36.27 E-value=18 Score=22.52 Aligned_cols=23 Identities=26% Similarity=0.433 Sum_probs=20.2
Q ss_pred CceecCHHHHHHHHHHcCCCeeE
Q 037161 62 RGKVRTKHEFINLATAAGFSGIR 84 (99)
Q Consensus 62 ~g~~rt~~e~~~ll~~aGf~~~~ 84 (99)
+-..+|-+|+.+.|++.||.+.+
T Consensus 31 ~~~I~tQeEL~~~L~~~Gi~vTQ 53 (170)
T 3lap_A 31 SAQVRSQNELAALLAAEGIEVTQ 53 (170)
T ss_dssp HSCCCSHHHHHHHHHHTTCCCCH
T ss_pred hCCCCCHHHHHHHHHHcCCCcCc
Confidence 56889999999999999998754
No 283
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=35.04 E-value=4.2 Score=26.19 Aligned_cols=30 Identities=7% Similarity=0.015 Sum_probs=21.0
Q ss_pred CccccCChHHHHHHHHHHHHhccCCCceEEEEe
Q 037161 1 SILHAWSDEHCLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~pgg~l~I~e 33 (99)
++||.. + +-...+.+++++| +|||.++-.+
T Consensus 123 k~LHlL-~-~~~~al~~v~~~L-~pggvfISfp 152 (200)
T 3fzg_A 123 KMLPVL-K-QQDVNILDFLQLF-HTQNFVISFP 152 (200)
T ss_dssp TCHHHH-H-HTTCCHHHHHHTC-EEEEEEEEEE
T ss_pred hHHHhh-h-hhHHHHHHHHHHh-CCCCEEEEeC
Confidence 467777 3 3334445899999 9988777766
No 284
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=34.96 E-value=19 Score=24.31 Aligned_cols=20 Identities=15% Similarity=0.162 Sum_probs=17.7
Q ss_pred ecCHHHHHHHHHHcCCCeeE
Q 037161 65 VRTKHEFINLATAAGFSGIR 84 (99)
Q Consensus 65 ~rt~~e~~~ll~~aGf~~~~ 84 (99)
.+|.+++.+++++|||+.++
T Consensus 321 ~~~~~~~~~~i~~~G~~~~~ 340 (350)
T 3t7v_A 321 DRDIKSVVRRLEIMGMKPAR 340 (350)
T ss_dssp CCCHHHHHHHHHHHTCEECC
T ss_pred cCCHHHHHHHHHHcCCcccc
Confidence 47999999999999998764
No 285
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=34.96 E-value=21 Score=24.67 Aligned_cols=24 Identities=13% Similarity=0.149 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEe
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e 33 (99)
....+++.++.+.| +|||.+++..
T Consensus 316 ~~~~~~l~~~~~~L-kpgG~l~~~~ 339 (396)
T 3c0k_A 316 RGYKDINMLAIQLL-NEGGILLTFS 339 (396)
T ss_dssp THHHHHHHHHHHTE-EEEEEEEEEE
T ss_pred HHHHHHHHHHHHhc-CCCcEEEEEe
Confidence 44678888888888 8888877754
No 286
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=34.93 E-value=11 Score=23.61 Aligned_cols=19 Identities=21% Similarity=0.282 Sum_probs=15.4
Q ss_pred HHHHHHHhccCCCceEEEEe
Q 037161 14 LLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 14 iL~~~~~al~~pgg~l~I~e 33 (99)
+++++.+.| +|||++++.-
T Consensus 176 ~~~~~~~~L-kpgG~lvi~~ 194 (227)
T 1r18_A 176 TPTELINQL-ASGGRLIVPV 194 (227)
T ss_dssp CCHHHHHTE-EEEEEEEEEE
T ss_pred HHHHHHHHh-cCCCEEEEEE
Confidence 447889999 9999998853
No 287
>2j9c_A GLNK1, hypothetical nitrogen regulatory PII-like protein MJ0059; EM single particle, nitrogen metabolism, signalling, transcription; HET: ATP; 1.30A {Methanococcus jannaschii} PDB: 2j9d_A* 2j9e_A* 2j9d_E*
Probab=33.67 E-value=41 Score=19.28 Aligned_cols=28 Identities=18% Similarity=0.340 Sum_probs=20.2
Q ss_pred ChHHHHHHHHHHHHhcc--CCC-ceEEEEee
Q 037161 7 SDEHCLKLLKNCYESIN--KED-GKLIVVEA 34 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~--~pg-g~l~I~e~ 34 (99)
+|+++.++++.+.+++. .+| |+++|.+-
T Consensus 68 ~de~v~~vv~~I~~~~~tg~~GdGkiFV~pV 98 (119)
T 2j9c_A 68 KEEDVDNVIDIICENARTGNPGDGKIFVIPV 98 (119)
T ss_dssp EGGGHHHHHHHHHHHHCCSSTTCEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 46778888888888772 244 89999774
No 288
>3cxj_A Uncharacterized protein; PSI-II, structural genomics structure initiative; 2.80A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=33.41 E-value=20 Score=22.30 Aligned_cols=20 Identities=10% Similarity=0.210 Sum_probs=17.0
Q ss_pred CHHHHHHHHHHcCCCeeEEE
Q 037161 67 TKHEFINLATAAGFSGIRFQ 86 (99)
Q Consensus 67 t~~e~~~ll~~aGf~~~~~~ 86 (99)
|.++..+||.+.||.+.++.
T Consensus 4 ~~~~I~~WL~eeG~~v~~~~ 23 (165)
T 3cxj_A 4 SQEMIKKWLDEEGFLRMEVP 23 (165)
T ss_dssp HHHHHHHHHHHTTCEEEECC
T ss_pred cHHHHHHHHHHcCceEecCC
Confidence 46899999999999988753
No 289
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=33.28 E-value=18 Score=24.40 Aligned_cols=21 Identities=14% Similarity=0.233 Sum_probs=17.8
Q ss_pred HHHHHHHHHhccCCCceEEEEe
Q 037161 12 LKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e 33 (99)
..+++++.+.| +|||+++++-
T Consensus 236 ~~~l~~~~~~L-k~gG~~~~v~ 256 (344)
T 2f8l_A 236 FLFIEQGMRYT-KPGGYLFFLV 256 (344)
T ss_dssp HHHHHHHHHTE-EEEEEEEEEE
T ss_pred HHHHHHHHHHh-CCCCEEEEEE
Confidence 36899999999 9999888754
No 290
>1x8d_A Hypothetical protein YIIL; mutarotase, L-rhamnose, biosynthetic protein; HET: RNS; 1.80A {Escherichia coli} SCOP: d.58.4.21
Probab=32.76 E-value=69 Score=18.05 Aligned_cols=30 Identities=10% Similarity=-0.078 Sum_probs=24.5
Q ss_pred HHHHHHHHHHcCCCeeEEEEcCC---CeeEEEE
Q 037161 68 KHEFINLATAAGFSGIRFQCFVC---NSWVMEF 97 (99)
Q Consensus 68 ~~e~~~ll~~aGf~~~~~~~~~~---~~~vie~ 97 (99)
..|..+.|+++|....+|...+. .++++|+
T Consensus 26 WPEv~~~L~~aGi~~ysIfl~~~~~~LF~~~E~ 58 (104)
T 1x8d_A 26 WPELEAVLKSHGAHNYAIYLDKARNLLFAMVEI 58 (104)
T ss_dssp CHHHHHHHHHTTEEEEEEEEETTTTEEEEEEEE
T ss_pred CHHHHHHHHHcCCeEEEEEEECCCCeEEEEEEE
Confidence 56899999999999999997753 4677775
No 291
>1b33_N Phycobilisome 7.8 KD linker polypeptide; light-harvesting protein, cyanobacteria, allophycocyanin, linker polypeptides; HET: BLA CYC; 2.30A {Mastigocladus laminosus} SCOP: d.30.1.1
Probab=32.69 E-value=46 Score=17.52 Aligned_cols=58 Identities=12% Similarity=0.118 Sum_probs=34.2
Q ss_pred ceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEEEcCC
Q 037161 27 GKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQCFVC 90 (99)
Q Consensus 27 g~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~~~~~ 90 (99)
||++.++.++|........ ..+.-..+... =..+|-.+|++++-+.-| +++.|.+..+
T Consensus 1 ~r~F~~~~~ip~~~~~~~~----~~~~~~~~t~~-VPy~rms~emQrI~r~GG-kIvSItp~~~ 58 (67)
T 1b33_N 1 GRLFKITACVPSQTRIRTQ----RELQNTYFTKL-VPYENWFREQQRIQKMGG-KIVKVELATG 58 (67)
T ss_dssp CCEEEEEEECCCSSCCCCS----CCHHHHEEEEE-EEHHHHHHHHHHHHHTTC-EEEEEEETTC
T ss_pred CceEEEEEEeCCccccccc----cccceEEEEEE-ecHHHHhHHHHHHHHcCC-eEEEEEECCC
Confidence 6899999999876432211 11111111000 123455678888877777 9999998753
No 292
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=32.52 E-value=23 Score=24.46 Aligned_cols=22 Identities=27% Similarity=0.453 Sum_probs=17.9
Q ss_pred HHHHHHHHHHhccCCCceEEEEe
Q 037161 11 CLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I~e 33 (99)
..++++.+.+.| +|||.+++..
T Consensus 310 ~~~ll~~~~~~L-~pgG~l~~~~ 331 (385)
T 2b78_A 310 YHKLIRQGLEIL-SENGLIIAST 331 (385)
T ss_dssp HHHHHHHHHHTE-EEEEEEEEEE
T ss_pred HHHHHHHHHHhc-CCCcEEEEEe
Confidence 456888999999 9999887754
No 293
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=31.55 E-value=58 Score=21.55 Aligned_cols=29 Identities=17% Similarity=0.288 Sum_probs=21.0
Q ss_pred ccCCh-------HHHHHHHHHHHHhccCCCceEEEEe
Q 037161 4 HAWSD-------EHCLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 4 Hdw~d-------~~~~~iL~~~~~al~~pgg~l~I~e 33 (99)
++|+| +....+++.+.+.. ..+|.++|+-
T Consensus 181 ~~WpD~gvP~~~~~~l~~i~~v~~~~-~~~~PivVHC 216 (287)
T 2b49_A 181 VAWPDHGVPDDSSDFLEFVNYVRSLR-VDSEPVLVHC 216 (287)
T ss_dssp CCSCSSSCCSSCHHHHHHHHHHHHHC-CTTCCEEEEC
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhc-cCCCcEEEEc
Confidence 36776 35778888888876 6677787764
No 294
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=30.50 E-value=50 Score=18.98 Aligned_cols=28 Identities=21% Similarity=0.186 Sum_probs=20.7
Q ss_pred ChHH-HHHHHHHHHHhccCCCceEEEEee
Q 037161 7 SDEH-CLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 7 ~d~~-~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
+..+ +..-|+.+++++++.|.+|++.++
T Consensus 40 ~~ke~Vy~hLeHIaksl~r~g~~L~v~p~ 68 (105)
T 2gmg_A 40 GSKKVILEDLKVISKIAKREGMVLLIKPA 68 (105)
T ss_dssp CCHHHHHHHHHHHHHHHTTTTEEEEECCC
T ss_pred ChHHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence 4456 888899999999445667777664
No 295
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=30.34 E-value=17 Score=24.61 Aligned_cols=26 Identities=12% Similarity=0.176 Sum_probs=21.4
Q ss_pred HHHHHHHHHHhccCCCceEEEEeeecC
Q 037161 11 CLKLLKNCYESINKEDGKLIVVEAVLP 37 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I~e~~~~ 37 (99)
...+++.+.+.| +|||.+++++....
T Consensus 270 ~~~~l~~~~~~L-~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 270 AHKFIDKALDIV-EEGGVIHYYTIGKD 295 (336)
T ss_dssp GGGGHHHHHHHE-EEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHc-CCCCEEEEEEeecC
Confidence 447899999999 99999999887533
No 296
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=30.16 E-value=34 Score=15.93 Aligned_cols=17 Identities=18% Similarity=0.077 Sum_probs=13.9
Q ss_pred CHHHHHHHHHHcCCCee
Q 037161 67 TKHEFINLATAAGFSGI 83 (99)
Q Consensus 67 t~~e~~~ll~~aGf~~~ 83 (99)
+.++..+.++.+||..+
T Consensus 50 ~~~~i~~~i~~~G~~~~ 66 (66)
T 1yg0_A 50 TQDLIKEALLDAGQEVV 66 (66)
T ss_dssp CHHHHHHHHHHHTCCCC
T ss_pred CHHHHHHHHHHcCCCcC
Confidence 67888999999998753
No 297
>3rhf_A Putative polyphosphate kinase 2 family protein; PSI-biology, MCSG, structural genomics, midwest center for S genomics; HET: PGE FLC PG4; 2.45A {Arthrobacter aurescens}
Probab=29.12 E-value=29 Score=23.54 Aligned_cols=67 Identities=10% Similarity=-0.012 Sum_probs=38.3
Q ss_pred HHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEEE
Q 037161 12 LKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRFQ 86 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~~ 86 (99)
.-.|.+..+.| |+.|.|.|+|.--.+... .. ....+.--... ..+.+...+|+..|...|..++++.
T Consensus 119 ~~ylwR~~~~l-P~~G~I~IFdRSwY~~vl---ve---rV~g~~~~~~~-~~~~~~I~~FE~~L~~~G~~ilKf~ 185 (289)
T 3rhf_A 119 HDFLWRIEKQV-PAAGMVGVFDRSQYEDVL---IH---RVHGWADAAEL-ERRYAAINDFESRLTEQGTTIVKVM 185 (289)
T ss_dssp SCTTHHHHTTC-CCTTCEEEEESCGGGGGT---HH---HHTTSSCHHHH-HHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred CCHHHHHHHhC-CCCCeEEEEeCchhhhHh---HH---HHhcCCCHHHH-HHHHHHHHHHHHHHHhCCCEEEEEE
Confidence 33567788888 888888888864332210 00 01110000000 1234456788999999998888875
No 298
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=29.12 E-value=31 Score=22.31 Aligned_cols=22 Identities=14% Similarity=0.466 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHhccCCCceEEEE
Q 037161 10 HCLKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 10 ~~~~iL~~~~~al~~pgg~l~I~ 32 (99)
....+|+.+++.| +|+|.++|.
T Consensus 52 ~~~~~l~~~~~~L-k~~g~i~v~ 73 (260)
T 1g60_A 52 FTYRWIDKVLDKL-DKDGSLYIF 73 (260)
T ss_dssp HHHHHHHHHHHHE-EEEEEEEEE
T ss_pred HHHHHHHHHHHHh-cCCeEEEEE
Confidence 3567888889999 999988875
No 299
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=28.87 E-value=24 Score=24.83 Aligned_cols=21 Identities=29% Similarity=0.406 Sum_probs=18.4
Q ss_pred HHHHHHHHHhccCCCceEEEEe
Q 037161 12 LKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e 33 (99)
...++++.+.| +|||++.++-
T Consensus 287 ~~fl~~~~~~L-k~gG~~a~V~ 307 (445)
T 2okc_A 287 LNFLQHMMLML-KTGGRAAVVL 307 (445)
T ss_dssp HHHHHHHHHHE-EEEEEEEEEE
T ss_pred HHHHHHHHHHh-ccCCEEEEEE
Confidence 57899999999 9999998865
No 300
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=28.84 E-value=63 Score=22.67 Aligned_cols=80 Identities=14% Similarity=0.104 Sum_probs=45.5
Q ss_pred cCChHHHHHHHHHHHHhccCCCceEEE----EeeecCCCCC-CchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcC
Q 037161 5 AWSDEHCLKLLKNCYESINKEDGKLIV----VEAVLPELPE-NSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAG 79 (99)
Q Consensus 5 dw~d~~~~~iL~~~~~al~~pgg~l~I----~e~~~~~~~~-~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aG 79 (99)
..++++..++++.+...- -|..+.++ .++.++.... ..+.+.........+.+. -++.-....+.+.++.||
T Consensus 105 ~i~~~di~~~i~~a~~~~-~p~d~~~l~~~p~~f~vDg~~~i~~P~Gm~g~~l~~~v~~v--~~~~~~v~n~~~~~~~AG 181 (419)
T 4a2a_A 105 SITLDILSEMQSEALEKL-KENGKTPLHIFSKRYLLDDERIVFNPLDMKASKIAIEYTSI--VVPLKVYEMFYNFLQDTV 181 (419)
T ss_dssp ECCHHHHHHHHHHHHHHH-SCTTEEEEEEEEEEEEETTTEEESCCTTCEESEEEEEEEEE--EEEHHHHHHHHHHHHTTS
T ss_pred EECHHHHHHHHHHhhhhc-CCCCCEEEEEEeeEEEECCccCcCCCCCCcccEEEEEEEEE--EEeHHHHHHHHHHHHHcC
Confidence 457788888888765543 35556555 3455554321 111111111122222332 355566788999999999
Q ss_pred CCeeEEEE
Q 037161 80 FSGIRFQC 87 (99)
Q Consensus 80 f~~~~~~~ 87 (99)
|++..+..
T Consensus 182 L~v~~lv~ 189 (419)
T 4a2a_A 182 KSPFQLKS 189 (419)
T ss_dssp CSCEEEEE
T ss_pred CcEEEEEE
Confidence 99988764
No 301
>4fpp_A Phosphotransferase; four helix bundle, bergerat fold, CCKA, CTRA, CPDR, bacterial cytoplasme; 2.20A {Caulobacter crescentus} PDB: 4fmt_A
Probab=28.81 E-value=47 Score=21.06 Aligned_cols=21 Identities=14% Similarity=0.189 Sum_probs=16.3
Q ss_pred HHHHHHHHHHhccCCCceEEEE
Q 037161 11 CLKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I~ 32 (99)
...++.|+.+++ ++||+|-|-
T Consensus 151 l~NLl~NA~~a~-~~gg~I~v~ 171 (247)
T 4fpp_A 151 VLNIAQIAASAL-PAGGVATVK 171 (247)
T ss_dssp HHHHHHHHHTTC-TTCCEEEEE
T ss_pred HHHHHHHHHHhc-CCCCeEEEE
Confidence 456788888898 899887663
No 302
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=28.65 E-value=20 Score=24.28 Aligned_cols=20 Identities=10% Similarity=0.375 Sum_probs=17.1
Q ss_pred HHHHHHHHHhccCCCceEEEE
Q 037161 12 LKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~ 32 (99)
...++.|+++| +|||.++..
T Consensus 178 ~eFy~~~~~~L-~p~Gv~v~q 197 (294)
T 3o4f_A 178 SAFYEGCKRCL-NPGGIFVAQ 197 (294)
T ss_dssp CHHHHHHHHTE-EEEEEEEEE
T ss_pred HHHHHHHHHHh-CCCCEEEEe
Confidence 46789999999 999988874
No 303
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=28.11 E-value=35 Score=23.34 Aligned_cols=25 Identities=8% Similarity=0.129 Sum_probs=22.2
Q ss_pred CceecCHHHHHHHHHHcCCCeeEEE
Q 037161 62 RGKVRTKHEFINLATAAGFSGIRFQ 86 (99)
Q Consensus 62 ~g~~rt~~e~~~ll~~aGf~~~~~~ 86 (99)
+|...+.+|..+++++.||..+++-
T Consensus 39 ~~~~~~t~~m~~~i~~~G~N~vRip 63 (340)
T 3qr3_A 39 NNYPDGIGQMQHFVNEDGMTIFRLP 63 (340)
T ss_dssp SCSCCHHHHHHHHHHHHCCCEEEEE
T ss_pred ccCCccHHHHHHHHHHCCCCEEEEE
Confidence 5678889999999999999999973
No 304
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli}
Probab=27.98 E-value=80 Score=17.62 Aligned_cols=25 Identities=16% Similarity=0.213 Sum_probs=19.4
Q ss_pred hHHHHHHHHHHHHhccCCCceEEEEe
Q 037161 8 DEHCLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 8 d~~~~~iL~~~~~al~~pgg~l~I~e 33 (99)
|......|.++.+.+++ |+++++..
T Consensus 60 Dssgl~~L~~~~~~~~~-g~~l~l~~ 84 (118)
T 3ny7_A 60 DAGGLDAFQRFVKRLPE-GCELRVCN 84 (118)
T ss_dssp CHHHHHHHHHHHHHCCT-TCEEEEEC
T ss_pred cHHHHHHHHHHHHHHHC-CCEEEEec
Confidence 56678888888888855 88888765
No 305
>2z51_A NIFU-like protein 2, chloroplast; CNFU, iron-sulfur cluster biosynthesis, metal transport; 1.35A {Arabidopsis thaliana} PDB: 2jnv_A
Probab=27.64 E-value=74 Score=19.38 Aligned_cols=30 Identities=13% Similarity=0.250 Sum_probs=25.2
Q ss_pred cCChHHHHHHHHHHHHhccCCCceEEEEee
Q 037161 5 AWSDEHCLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 5 dw~d~~~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
....+...++|.+++.+|...||-+-+++.
T Consensus 3 ~~~~e~v~~~L~~iRP~l~~dGGdvelv~v 32 (154)
T 2z51_A 3 PLTEENVESVLDEIRPYLMSDGGNVALHEI 32 (154)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred cchHHHHHHHHHHhChHHHhcCCeEEEEEE
Confidence 457788999999999999667888888875
No 306
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=27.50 E-value=29 Score=21.87 Aligned_cols=21 Identities=14% Similarity=0.371 Sum_probs=19.3
Q ss_pred CceecCHHHHHHHHHHcCCCe
Q 037161 62 RGKVRTKHEFINLATAAGFSG 82 (99)
Q Consensus 62 ~g~~rt~~e~~~ll~~aGf~~ 82 (99)
+-..+|-+|..+.|++.||.+
T Consensus 44 ~~~I~TQeEL~~~L~~~Gi~v 64 (180)
T 3v4g_A 44 EERFGSQGEIVEALKQEGFEN 64 (180)
T ss_dssp HTCCCSHHHHHHHHHHTTCTT
T ss_pred hCCcCCHHHHHHHHHHCCCcc
Confidence 567899999999999999998
No 307
>1cqm_A Ribosomal protein S6; alzheimer disease, oligomerization; 1.65A {Thermus thermophilus} SCOP: d.58.14.1 PDB: 1cqn_A 1qjh_A 1ris_A 1fka_F 1gix_I* 1hnw_F* 1hnx_F* 1hnz_F* 1hr0_F 1i94_F* 1i95_F* 1i96_F* 1i97_F* 1ibk_F* 1ibl_F* 1ibm_F 1j5e_F 1jgo_I* 1jgp_I* 1jgq_I* ...
Probab=27.13 E-value=86 Score=17.37 Aligned_cols=30 Identities=3% Similarity=-0.061 Sum_probs=23.8
Q ss_pred cCChHHHHHHHHHHHHhccCCCceEEEEee
Q 037161 5 AWSDEHCLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 5 dw~d~~~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
+.++++...+++++...+..-||.+.=+|.
T Consensus 13 ~l~~e~~~~~~~~~~~~i~~~gg~i~~~e~ 42 (101)
T 1cqm_A 13 NLDQSQLALEKEIIQRALENYGARVEKVAI 42 (101)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCEEEEEEe
Confidence 357899999999999988456777776664
No 308
>1f6v_A DNA transposition protein; MU phage, recombination, ATPase, DNA binding, high salt, solution structure, DNA binding protein; HET: DNA; NMR {Enterobacteria phage MU} SCOP: a.49.1.1
Probab=27.08 E-value=11 Score=21.24 Aligned_cols=18 Identities=28% Similarity=0.359 Sum_probs=12.1
Q ss_pred ChHHHHHHHHHHHHhccCCCc
Q 037161 7 SDEHCLKLLKNCYESINKEDG 27 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~~pgg 27 (99)
.|+++.++|..|.+ +|||
T Consensus 28 ~d~~~~~~l~~I~~---KpGa 45 (91)
T 1f6v_A 28 NGEKELELLQQIAQ---KPGA 45 (91)
T ss_dssp SSSHHHHHHHTTSS---SCSC
T ss_pred CCHHHHHHHHHHcc---CccH
Confidence 57777777777654 5654
No 309
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=27.00 E-value=76 Score=20.50 Aligned_cols=33 Identities=6% Similarity=0.024 Sum_probs=25.0
Q ss_pred cCHHHHHHHHHHcCCCeeEEEEcC---CCeeEEEEE
Q 037161 66 RTKHEFINLATAAGFSGIRFQCFV---CNSWVMEFY 98 (99)
Q Consensus 66 rt~~e~~~ll~~aGf~~~~~~~~~---~~~~vie~~ 98 (99)
....+.++||.+.||.+++..-+. -.+.+|.+.
T Consensus 127 ~~~~~lr~~L~~~Gf~i~~E~lv~e~~~~Yeii~~~ 162 (230)
T 3lec_A 127 NREDDLRKWLAANDFEIVAEDILTENDKRYEILVVK 162 (230)
T ss_dssp SCHHHHHHHHHHTTEEEEEEEEEEC--CEEEEEEEE
T ss_pred CChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 358899999999999999876542 356677664
No 310
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=26.99 E-value=85 Score=17.29 Aligned_cols=32 Identities=16% Similarity=0.153 Sum_probs=20.0
Q ss_pred ecCHHHHHHHHHHcCCCeeEEEEcCCCeeEEEE
Q 037161 65 VRTKHEFINLATAAGFSGIRFQCFVCNSWVMEF 97 (99)
Q Consensus 65 ~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~ 97 (99)
.-|.+++.++|.+.| ++..+.-....++.|++
T Consensus 27 ~~t~~~l~~~F~~~G-~v~~~~i~~~g~afV~f 58 (115)
T 3beg_B 27 SGSWQDLKDHMREAG-DVCYADVYRDGTGVVEF 58 (115)
T ss_dssp SCCTTHHHHHHGGGS-CEEEEEECTTSEEEEEE
T ss_pred CCCHHHHHHHHHhcC-CeEEEEEecCCEEEEEE
Confidence 446778888888888 66555433335555553
No 311
>1wwu_A Hypothetical protein FLJ21935; structural genomics, protein regulation, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens}
Probab=26.92 E-value=39 Score=19.20 Aligned_cols=25 Identities=16% Similarity=-0.003 Sum_probs=19.6
Q ss_pred ecCHHHHHHHHHHcCCCeeEEEEcC
Q 037161 65 VRTKHEFINLATAAGFSGIRFQCFV 89 (99)
Q Consensus 65 ~rt~~e~~~ll~~aGf~~~~~~~~~ 89 (99)
.-|.+|.++||.+-||....+..++
T Consensus 23 ~Ssp~EV~~WL~~kgFS~~tv~~Lg 47 (99)
T 1wwu_A 23 ESGPDEVRAWLEAKAFSPRIVENLG 47 (99)
T ss_dssp TCCHHHHHHHHHHHTCCTTHHHHTT
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHHc
Confidence 3468899999999999987555443
No 312
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=26.68 E-value=34 Score=20.74 Aligned_cols=22 Identities=23% Similarity=0.439 Sum_probs=17.4
Q ss_pred CceecCHHHHHHHHHHcCCCee
Q 037161 62 RGKVRTKHEFINLATAAGFSGI 83 (99)
Q Consensus 62 ~g~~rt~~e~~~ll~~aGf~~~ 83 (99)
.-...|.+|+.+.|++.||.+.
T Consensus 16 ~~~~~tq~eL~~~L~~~G~~Vt 37 (149)
T 1b4a_A 16 SNDIETQDELVDRLREAGFNVT 37 (149)
T ss_dssp HSCCCSHHHHHHHHHHTTCCCC
T ss_pred HCCCccHHHHHHHHHHcCCCcC
Confidence 4567788899999999998754
No 313
>2bh1_A General secretion pathway protein L; transport protein, type II secretion, EPS, transmembrane, transport, ATP-binding; 2.4A {Vibrio cholerae} SCOP: c.55.1.11 c.55.1.11 PDB: 1yf5_L 1w97_L
Probab=26.61 E-value=68 Score=20.99 Aligned_cols=21 Identities=19% Similarity=0.112 Sum_probs=18.2
Q ss_pred HHHHHHHHHHcCCCeeEEEEc
Q 037161 68 KHEFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 68 ~~e~~~ll~~aGf~~~~~~~~ 88 (99)
...|.++|+++|++...+.|-
T Consensus 118 l~~wl~~l~~~Gl~~~~i~Pd 138 (250)
T 2bh1_A 118 LRACLDHLKACGFDVKRVLPD 138 (250)
T ss_dssp HHHHHHHHHHTTCCEEEEEEG
T ss_pred HHHHHHHHHHCCCCccEEEec
Confidence 567888899999999999983
No 314
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=26.49 E-value=28 Score=23.81 Aligned_cols=20 Identities=25% Similarity=0.409 Sum_probs=17.3
Q ss_pred HHHHHHHHhccCCCceEEEEe
Q 037161 13 KLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 13 ~iL~~~~~al~~pgg~l~I~e 33 (99)
.+++++.+.| +|||+++++-
T Consensus 145 ~fl~~~~~~L-k~~G~~~~i~ 164 (421)
T 2ih2_A 145 AFLEKAVRLL-KPGGVLVFVV 164 (421)
T ss_dssp HHHHHHHHHE-EEEEEEEEEE
T ss_pred HHHHHHHHHh-CCCCEEEEEE
Confidence 6799999999 9999988854
No 315
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=26.38 E-value=32 Score=21.20 Aligned_cols=57 Identities=4% Similarity=0.119 Sum_probs=33.3
Q ss_pred ccCChHHHHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCee
Q 037161 4 HAWSDEHCLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGI 83 (99)
Q Consensus 4 Hdw~d~~~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~ 83 (99)
.||.......|.+++. .+ ++|+.++++|.. . . . . ....++...|++.|++.+
T Consensus 129 ~Dw~~~~~~~i~~~~~-~~-~~g~IiL~Hd~~-------~-~----t-~-------------~al~~ii~~l~~~Gy~~v 180 (195)
T 2cc0_A 129 QDWNNASTDAIVQAVS-RL-GNGQVILMHDWP-------A-N----T-L-------------AAIPRIAQTLAGKGLCSG 180 (195)
T ss_dssp CGGGTCCHHHHHHHHH-TC-CTTCEEEEESSC-------H-H----H-H-------------HHHHHHHHHHHHTTEEEC
T ss_pred CccCCCCHHHHHHHHh-Cc-CcCeEEEECCCc-------h-h----H-H-------------HHHHHHHHHHHHCCCEEE
Confidence 3564444556677664 46 788877777631 0 0 0 0 114466677788888777
Q ss_pred EEEEc
Q 037161 84 RFQCF 88 (99)
Q Consensus 84 ~~~~~ 88 (99)
.+.+.
T Consensus 181 ~l~~~ 185 (195)
T 2cc0_A 181 MISPQ 185 (195)
T ss_dssp EECTT
T ss_pred EeCcc
Confidence 66543
No 316
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=25.92 E-value=53 Score=21.03 Aligned_cols=23 Identities=26% Similarity=0.414 Sum_probs=18.6
Q ss_pred ccccC-ChHHHHHHHHHHHHhccCC
Q 037161 2 ILHAW-SDEHCLKLLKNCYESINKE 25 (99)
Q Consensus 2 vlHdw-~d~~~~~iL~~~~~al~~p 25 (99)
++||+ ++++|..|++.+...+ .+
T Consensus 43 ~~~~fLs~~Ec~~Li~~a~~~l-~~ 66 (216)
T 3itq_A 43 VLGNVLSDEECDELIELSKSKL-AR 66 (216)
T ss_dssp EEESCSCHHHHHHHHHHHHHHH-C-
T ss_pred EECCcCCHHHHHHHHHHhhccc-cc
Confidence 56776 9999999999888878 55
No 317
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=25.71 E-value=48 Score=18.29 Aligned_cols=26 Identities=8% Similarity=0.280 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEee
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
+...++|.+++.+|...||-+-+++.
T Consensus 10 ~~I~~~L~~IRP~L~~dGGdvelv~v 35 (88)
T 1xhj_A 10 DQVAEVIERLRPFLLRDGGDCTLVDV 35 (88)
T ss_dssp HHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred HHHHHHHHHhcHHHHhcCCeEEEEEE
Confidence 45778888899998667998888875
No 318
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=25.57 E-value=87 Score=16.92 Aligned_cols=33 Identities=15% Similarity=0.142 Sum_probs=22.5
Q ss_pred eecCHHHHHHHHHHcCCCeeEEEEcCCCeeEEEE
Q 037161 64 KVRTKHEFINLATAAGFSGIRFQCFVCNSWVMEF 97 (99)
Q Consensus 64 ~~rt~~e~~~ll~~aGf~~~~~~~~~~~~~vie~ 97 (99)
..-|.+++.++|.+.| .+..+.-....++.+++
T Consensus 25 ~~~t~~~l~~~F~~~G-~i~~~~i~~~g~afV~f 57 (108)
T 1x4c_A 25 PSGSWQDLKDHMREAG-DVCYADVYRDGTGVVEF 57 (108)
T ss_dssp SSCCHHHHHHHHGGGS-CEEEEEEETTTEEEEEE
T ss_pred CCCCHHHHHHHHHhcC-CEeEEEEecCCEEEEEE
Confidence 4567899999999999 66665443335555554
No 319
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=25.53 E-value=29 Score=19.46 Aligned_cols=21 Identities=0% Similarity=-0.075 Sum_probs=18.2
Q ss_pred CceecCHHHHHHHHHHcCCCe
Q 037161 62 RGKVRTKHEFINLATAAGFSG 82 (99)
Q Consensus 62 ~g~~rt~~e~~~ll~~aGf~~ 82 (99)
.-..+|.++...||++.||..
T Consensus 16 ~v~~Ws~edV~~WL~~~Gl~~ 36 (97)
T 2d8c_A 16 EVVYWSPKKVADWLLENAMPE 36 (97)
T ss_dssp CCSSCCTTHHHHHHHHTTCTT
T ss_pred chhhCCHHHHHHHHHHcCCHH
Confidence 457789999999999999875
No 320
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=25.38 E-value=36 Score=25.72 Aligned_cols=23 Identities=17% Similarity=0.388 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHhccCCCceEEEE
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~ 32 (99)
..-.++++++.+.| +|||.|++.
T Consensus 634 ~~~~~ll~~a~~~L-kpgG~L~~s 656 (703)
T 3v97_A 634 RDHLALMKDLKRLL-RAGGTIMFS 656 (703)
T ss_dssp HHHHHHHHHHHHHE-EEEEEEEEE
T ss_pred HHHHHHHHHHHHhc-CCCcEEEEE
Confidence 34678899999999 999988854
No 321
>2c1i_A Peptidoglycan glcnac deacetylase; carbohydrate esterase, peptidoglycan deacetylase, metalloenzyme, D275N mutant, hydrolase; HET: MES; 1.35A {Streptococcus pneumoniae} SCOP: c.6.2.3 d.341.1.1 PDB: 2c1g_A
Probab=24.91 E-value=21 Score=25.51 Aligned_cols=28 Identities=7% Similarity=0.326 Sum_probs=20.6
Q ss_pred cCChHHHHHHHHHHHHhccCCCceEEEEe
Q 037161 5 AWSDEHCLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 5 dw~d~~~~~iL~~~~~al~~pgg~l~I~e 33 (99)
||.......+++++.+.+ .||+.++.+|
T Consensus 359 Dw~~~~~~~i~~~v~~~~-~~G~IIL~HD 386 (431)
T 2c1i_A 359 DWKSKNEASILTEIQHQV-ANGSIVLMHD 386 (431)
T ss_dssp HHHHCCHHHHHHHHHHHC-CTTEEEEEET
T ss_pred ccccCCHHHHHHHHHHhc-cCCCEEEECC
Confidence 454444567888888888 8988877776
No 322
>2pww_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.82A {Bacillus clausii} SCOP: d.129.11.1
Probab=24.85 E-value=33 Score=20.43 Aligned_cols=21 Identities=19% Similarity=0.056 Sum_probs=19.5
Q ss_pred CceecCHHHHHHHHHHcCCCe
Q 037161 62 RGKVRTKHEFINLATAAGFSG 82 (99)
Q Consensus 62 ~g~~rt~~e~~~ll~~aGf~~ 82 (99)
.|+..+..+.++.++..||.+
T Consensus 11 eg~~~~l~~Ld~~m~~~Gfv~ 31 (127)
T 2pww_A 11 EEKEVAFSIVNHAAKSLGFIH 31 (127)
T ss_dssp TSSCEEHHHHHHHHHHTTCEE
T ss_pred cceEEEHHHHHHHHHHCCcEe
Confidence 688999999999999999987
No 323
>2j5a_A 30S ribosomal protein S6; ribonucleoprotein, RIBO protein S6, RNA-binding, rRNA-binding, protein folding; 2.3A {Aquifex aeolicus} SCOP: d.58.14.1
Probab=24.55 E-value=1e+02 Score=17.43 Aligned_cols=30 Identities=23% Similarity=0.344 Sum_probs=23.6
Q ss_pred cCChHHHHHHHHHHHHhccCCCceEEEEee
Q 037161 5 AWSDEHCLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 5 dw~d~~~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
+.++++...+++++...+..-||.+.=+|.
T Consensus 19 ~l~~e~~~~~v~~~~~~i~~~Gg~i~~~e~ 48 (110)
T 2j5a_A 19 TLSEEEMKKKFEQVKEFIKQKGGEILYEED 48 (110)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCEEEEEEe
Confidence 357889999999999998455777776664
No 324
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A*
Probab=23.78 E-value=87 Score=17.62 Aligned_cols=26 Identities=19% Similarity=0.278 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHHHhccCCCceEEEEe
Q 037161 8 DEHCLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 8 d~~~~~iL~~~~~al~~pgg~l~I~e 33 (99)
|......|.++.+.+++.|+++++..
T Consensus 63 Dssgl~~L~~~~~~~~~~g~~l~l~~ 88 (130)
T 4dgh_A 63 DITGIQTLEEMIQSFHKRGIKVLISG 88 (130)
T ss_dssp CHHHHHHHHHHHHHHHTTTCEEEEEC
T ss_pred cHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 66788889999888856678887764
No 325
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=23.64 E-value=51 Score=15.17 Aligned_cols=18 Identities=6% Similarity=0.169 Sum_probs=13.4
Q ss_pred cCHHHHHHHHHHcCCCee
Q 037161 66 RTKHEFINLATAAGFSGI 83 (99)
Q Consensus 66 rt~~e~~~ll~~aGf~~~ 83 (99)
-+.+++.+.++.+||...
T Consensus 51 ~~~~~i~~~i~~~G~~~~ 68 (69)
T 2qif_A 51 VSVKDIADAIEDQGYDVA 68 (69)
T ss_dssp CCHHHHHHHHHHTTCEEC
T ss_pred CCHHHHHHHHHHcCCCcc
Confidence 356778888889998643
No 326
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=23.50 E-value=44 Score=22.57 Aligned_cols=22 Identities=9% Similarity=0.238 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhccCCCceEEEE
Q 037161 10 HCLKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 10 ~~~~iL~~~~~al~~pgg~l~I~ 32 (99)
.....|+.+++.| +|+|.++|.
T Consensus 84 ~~~~~l~~~~rvL-k~~G~i~i~ 105 (319)
T 1eg2_A 84 WAKRWLAEAERVL-SPTGSIAIF 105 (319)
T ss_dssp HHHHHHHHHHHHE-EEEEEEEEE
T ss_pred HHHHHHHHHHHHc-CCCeEEEEE
Confidence 4677888899999 999988774
No 327
>1jl0_A Adometdc, S-adenosylmethionine decarboxylase proenzyme; spermidine biosynthesis, lyase, pyruvate, sandwich, allosteric enzyme, pyruvoyl; 1.50A {Homo sapiens} SCOP: d.156.1.1 PDB: 1msv_A 1i7b_A* 1i79_A* 1i72_A* 1i7c_A* 1i7m_A* 3dz6_A* 3dz2_A* 3dz5_A* 3dz4_A* 3dz7_A* 3h0w_A* 3h0v_A* 1jen_A 3dz3_A* 3ep9_A 3ep6_A* 3ep3_A* 3ep8_A* 3ep5_A* ...
Probab=23.40 E-value=1.1e+02 Score=21.17 Aligned_cols=27 Identities=15% Similarity=-0.075 Sum_probs=23.1
Q ss_pred ceecCHHHHHHHHHHcCCCeeEEEEcC
Q 037161 63 GKVRTKHEFINLATAAGFSGIRFQCFV 89 (99)
Q Consensus 63 g~~rt~~e~~~ll~~aGf~~~~~~~~~ 89 (99)
=|.-+.++|.++|+.|+-+++......
T Consensus 32 LR~i~~~~w~~~L~~a~C~IlS~~sn~ 58 (334)
T 1jl0_A 32 LRTIPRSEWDILLKDVQCSIISVTKTD 58 (334)
T ss_dssp GGGSCHHHHHHHHHTTTCCEEEEEECS
T ss_pred cccCCHHHHHHHHHhcCCEEEEeeccc
Confidence 466779999999999999999987654
No 328
>3mf7_A CIS-3-chloroacrylic acid dehalogenase; beta-alpha-beta motif, tautomerase, CIS-3-CHLO acid dehalogenase, isomerase, hydrolase; HET: PR4; 1.65A {Coryneform bacterium} PDB: 3mf8_A 2flt_A 2flz_A
Probab=23.35 E-value=1.1e+02 Score=18.21 Aligned_cols=69 Identities=7% Similarity=-0.109 Sum_probs=37.5
Q ss_pred cCChHHHHHHHHHHHHhcc-----CCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHH
Q 037161 5 AWSDEHCLKLLKNCYESIN-----KEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATA 77 (99)
Q Consensus 5 dw~d~~~~~iL~~~~~al~-----~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~ 77 (99)
-.++++-.+|.+.+.+++. |+.-..+++..+-++.- ..+.....-++.+...+ -+..||.++.+++.++
T Consensus 11 ~~t~eqK~aLa~~It~a~~e~~~vP~~~v~Vif~e~~~~~~---~~gG~~rsd~~v~I~i~-~~~GRt~eqK~~L~~~ 84 (149)
T 3mf7_A 11 RLTPSAKHAVAKAITDAHRGLTGTQHFLAQVNFQEQPAGNV---FLGGVQQGGDTIFVHGL-HREGRSADLKGQLAQR 84 (149)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTCCTTCCCCEEEEEEECTTCC---EETTEECCSCCEEEEEE-EESCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCcChHHEEEEEEEcCccce---EECCEEcCCCEEEEEEE-ecCCCCHHHHHHHHHH
Confidence 3678999999999988762 44445554555433321 01001111233322222 3557899888877653
No 329
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A
Probab=23.32 E-value=1.1e+02 Score=20.14 Aligned_cols=30 Identities=20% Similarity=0.317 Sum_probs=19.4
Q ss_pred ccCCh-------HHHHHHHHHHHHhccCCCceEEEEe
Q 037161 4 HAWSD-------EHCLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 4 Hdw~d-------~~~~~iL~~~~~al~~pgg~l~I~e 33 (99)
.+|+| .....+++.+.+...+.+|.++|+-
T Consensus 183 ~~WpD~gvP~~~~~ll~~i~~v~~~~~~~~~PivVHC 219 (286)
T 2ooq_A 183 TSWPDHGVPCYATGLLGFVRQVKFLNPPEAGPIVVHC 219 (286)
T ss_dssp CSCCTTCCCSCSHHHHHHHHHHHHHSCTTSCCEEEEC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEe
Confidence 46876 3567888888776512456777653
No 330
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A
Probab=23.15 E-value=58 Score=16.93 Aligned_cols=18 Identities=6% Similarity=0.073 Sum_probs=13.0
Q ss_pred ecCHHHHHHHHHHcCCCe
Q 037161 65 VRTKHEFINLATAAGFSG 82 (99)
Q Consensus 65 ~rt~~e~~~ll~~aGf~~ 82 (99)
..|.++..+||++.||..
T Consensus 4 ~Ws~~~V~~WL~~lgl~~ 21 (76)
T 2f3n_A 4 LWSKFDVGDWLESIHLGE 21 (76)
T ss_dssp GCCHHHHHHHHHHTTCGG
T ss_pred hCCHHHHHHHHHHCCCHH
Confidence 467777778888877753
No 331
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Probab=21.99 E-value=1.1e+02 Score=20.43 Aligned_cols=29 Identities=17% Similarity=0.510 Sum_probs=19.3
Q ss_pred ccCCh-------HHHHHHHHHHHHhccCCCceEEEE
Q 037161 4 HAWSD-------EHCLKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 4 Hdw~d-------~~~~~iL~~~~~al~~pgg~l~I~ 32 (99)
.+|+| .....+++.+.+...+..|-++|+
T Consensus 206 ~~WPD~gvP~~~~~ll~fi~~v~~~~~~~~~PIvVH 241 (307)
T 3s3e_A 206 TTWPDFGVPNPPQTLVRFVRAFRDRIGAEQRPIVVH 241 (307)
T ss_dssp CCCCSSSCCSSTHHHHHHHHHHHHHHCSCCSCEEEE
T ss_pred CCcccCCCCCChHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 47877 456788888887762335666665
No 332
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=21.96 E-value=49 Score=22.28 Aligned_cols=24 Identities=8% Similarity=0.177 Sum_probs=18.3
Q ss_pred HHHHHHHHHHhccCCC-ceEEEEeeec
Q 037161 11 CLKLLKNCYESINKED-GKLIVVEAVL 36 (99)
Q Consensus 11 ~~~iL~~~~~al~~pg-g~l~I~e~~~ 36 (99)
...+|+-+.+.| +|| |.+++ ..+-
T Consensus 162 s~~LL~~a~~~L-kpG~G~FV~-KVf~ 186 (277)
T 3evf_A 162 TVRVLDTVEKWL-ACGVDNFCV-KVLA 186 (277)
T ss_dssp HHHHHHHHHHHH-TTCCSEEEE-EESC
T ss_pred HHHHHHHHHHHh-CCCCCeEEE-EecC
Confidence 456789999999 999 88777 5443
No 333
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=21.70 E-value=54 Score=17.58 Aligned_cols=23 Identities=17% Similarity=0.208 Sum_probs=15.4
Q ss_pred eecCHHHHHHHHHHcCCCeeEEE
Q 037161 64 KVRTKHEFINLATAAGFSGIRFQ 86 (99)
Q Consensus 64 ~~rt~~e~~~ll~~aGf~~~~~~ 86 (99)
-+|...|++.-+..||-..+++.
T Consensus 31 leralqelekalaragarnvqit 53 (96)
T 2jvf_A 31 LERALQELEKALARAGARNVQIT 53 (96)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHHHhccccceEEE
Confidence 35667777777777776666654
No 334
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=21.60 E-value=27 Score=23.31 Aligned_cols=49 Identities=10% Similarity=0.114 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCee
Q 037161 11 CLKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGI 83 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~ 83 (99)
+...|..+.+.| +|||.|.+++.+-.+... .+..+.++++.++.|+++.
T Consensus 204 ~~~~l~~a~~~l-k~gG~ih~~~~~~e~~~~-----------------------~~~~e~i~~~~~~~g~~v~ 252 (278)
T 3k6r_A 204 THEFIPKALSIA-KDGAIIHYHNTVPEKLMP-----------------------REPFETFKRITKEYGYDVE 252 (278)
T ss_dssp GGGGHHHHHHHE-EEEEEEEEEEEEEGGGTT-----------------------TTTHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHc-CCCCEEEEEeeecccccc-----------------------hhHHHHHHHHHHHcCCcEE
Confidence 457888889999 999999888876432211 1234466777888898754
No 335
>4h62_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; HET: MES; 3.00A {Saccharomyces cerevisiae}
Probab=21.54 E-value=62 Score=13.80 Aligned_cols=18 Identities=28% Similarity=0.650 Sum_probs=13.2
Q ss_pred cCChHHHHHHHHHHHHhc
Q 037161 5 AWSDEHCLKLLKNCYESI 22 (99)
Q Consensus 5 dw~d~~~~~iL~~~~~al 22 (99)
-+++.+...+|.||.+..
T Consensus 8 rfdekqieelldncietf 25 (31)
T 4h62_V 8 RFDEKQIEELLDNCIETF 25 (31)
T ss_dssp --CHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHH
Confidence 467888999999998753
No 336
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=21.53 E-value=47 Score=18.53 Aligned_cols=15 Identities=27% Similarity=0.477 Sum_probs=13.1
Q ss_pred cccCChHHHHHHHHH
Q 037161 3 LHAWSDEHCLKLLKN 17 (99)
Q Consensus 3 lHdw~d~~~~~iL~~ 17 (99)
+..|+.++++++|++
T Consensus 61 v~g~~h~evv~lLk~ 75 (95)
T 3gge_A 61 IVGWRHYDVAKKLKE 75 (95)
T ss_dssp CTTCCHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHh
Confidence 457999999999987
No 337
>2e8m_A Epidermal growth factor receptor kinase substrate 8; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.44 E-value=33 Score=19.53 Aligned_cols=24 Identities=13% Similarity=0.250 Sum_probs=18.7
Q ss_pred ecCHHHHHHHHHHcCCCeeEEEEc
Q 037161 65 VRTKHEFINLATAAGFSGIRFQCF 88 (99)
Q Consensus 65 ~rt~~e~~~ll~~aGf~~~~~~~~ 88 (99)
.-|.+|.++||.+-||....+..+
T Consensus 33 ~Ssp~EV~~WL~~kgFS~~tv~~L 56 (99)
T 2e8m_A 33 DSTPEDVKTWLQSKGFNPVTVNSL 56 (99)
T ss_dssp TCCTTHHHHHHHHHTCCHHHHHHT
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHH
Confidence 446789999999999988655444
No 338
>2gol_A Matrix protein P17 (MA); viral maturation, immature, GAG, HIV-1, viral protein; 2.20A {Human immunodeficiency virus 1} SCOP: a.61.1.1 PDB: 1hiw_A 2hmx_A 2h3f_A 2h3i_A* 2h3q_A* 2h3v_A* 2h3z_A* 1uph_A* 2nv3_A* 2jmg_A* 1tam_A
Probab=21.30 E-value=84 Score=18.80 Aligned_cols=20 Identities=20% Similarity=0.411 Sum_probs=16.7
Q ss_pred ChHHHHHHHHHHHHhccCCCc
Q 037161 7 SDEHCLKLLKNCYESINKEDG 27 (99)
Q Consensus 7 ~d~~~~~iL~~~~~al~~pgg 27 (99)
+-+-|.+||..+..+| +.|+
T Consensus 54 T~eGC~qIl~qLqPal-~TGS 73 (133)
T 2gol_A 54 TSEGCRQILGQLQPSL-QTGS 73 (133)
T ss_dssp SHHHHHHHHHHHHHHH-TTTC
T ss_pred hHHHHHHHHHHhcccc-cccc
Confidence 3567999999999999 7764
No 339
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=21.27 E-value=51 Score=21.10 Aligned_cols=29 Identities=3% Similarity=0.021 Sum_probs=20.3
Q ss_pred ccCCh---HHHHHHHHHHHHhccCCCceEEEEe
Q 037161 4 HAWSD---EHCLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 4 Hdw~d---~~~~~iL~~~~~al~~pgg~l~I~e 33 (99)
.||.. .....+.+++.+.+ +||+.|+++|
T Consensus 169 ~Dw~~~~~~~~~~~~~~v~~~~-~~g~Iil~Hd 200 (240)
T 1ny1_A 169 VDWKINNQKGKKYAYDHMIKQA-HPGAIYLLHT 200 (240)
T ss_dssp SCCCGGGCCCHHHHHHHHHHTC-CTTEEEEECS
T ss_pred cccCCcCCCCHHHHHHHHHhCC-CCCeEEEEcC
Confidence 46742 23566888888888 8888777765
No 340
>3r3t_A 30S ribosomal protein S6; structural genomics, center for structural genomics of infec diseases, csgid, beta-barrel, cytosol; 2.30A {Bacillus anthracis}
Probab=21.25 E-value=68 Score=17.77 Aligned_cols=30 Identities=10% Similarity=0.155 Sum_probs=22.3
Q ss_pred cCChHHHHHHHHHHHHhccCCCceEEEEee
Q 037161 5 AWSDEHCLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 5 dw~d~~~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
+.++++...+++++...+..-||.+.=+|.
T Consensus 16 ~~~~e~~~~~~~~~~~~i~~~gg~i~~~e~ 45 (99)
T 3r3t_A 16 GVEEEAQKALVERFAGVLTNNGAEIINTKE 45 (99)
T ss_dssp TSCHHHHHHHHHHHHHHHHTTTCCCCCCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
Confidence 357899999999999998455676554443
No 341
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=21.21 E-value=1e+02 Score=17.42 Aligned_cols=24 Identities=8% Similarity=-0.029 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEe
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e 33 (99)
+...++++-+.+++ ..++.++|+=
T Consensus 73 ~~~~~~~~~i~~~~-~~~~~vlVHC 96 (151)
T 2img_A 73 DQIDRFVQIVDEAN-ARGEAVGVHC 96 (151)
T ss_dssp HHHHHHHHHHHHHH-HTTCEEEEEC
T ss_pred HHHHHHHHHHHHHH-hCCCcEEEEC
Confidence 34567777777777 6788888864
No 342
>4ed9_A CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: NHE; 1.95A {Brucella suis}
Probab=21.12 E-value=55 Score=22.89 Aligned_cols=23 Identities=9% Similarity=0.144 Sum_probs=18.8
Q ss_pred eecCHHHHHHHHHHcCCCeeEEE
Q 037161 64 KVRTKHEFINLATAAGFSGIRFQ 86 (99)
Q Consensus 64 ~~rt~~e~~~ll~~aGf~~~~~~ 86 (99)
..||.+||.++|+++|...-.|.
T Consensus 303 ~~~t~~ew~~~l~~~~vp~~pV~ 325 (385)
T 4ed9_A 303 KQWKRDDLLAELAKIGVPAGPIN 325 (385)
T ss_dssp TTSCHHHHHHHHHHTTCCEEECC
T ss_pred hhCCHHHHHHHHHHcCccEEeCC
Confidence 57899999999999997665543
No 343
>3fpn_A Geobacillus stearothermophilus UVRA interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=21.10 E-value=74 Score=18.45 Aligned_cols=47 Identities=13% Similarity=0.233 Sum_probs=32.0
Q ss_pred HHHHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCCceecCHHHHHHHHHHcCCCeeEE
Q 037161 12 LKLLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPRGKVRTKHEFINLATAAGFSGIRF 85 (99)
Q Consensus 12 ~~iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~g~~rt~~e~~~ll~~aGf~~~~~ 85 (99)
..|..++. ++ +.|.++.|.-+++... ..+..+.-+++.+.||..+++
T Consensus 7 ~qivd~il-~~-~egtri~iLAPvv~~r-------------------------Kg~~~~ll~~l~~~Gf~Rvrv 53 (119)
T 3fpn_A 7 EQMVDRLL-SY-PERTKMQILAPIVSGK-------------------------KGTHAKTLEDIRKQGYVRVRI 53 (119)
T ss_dssp HHHHHHHH-TS-CTTCEEEEEEEEEEEE-------------------------CSCCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHH-hC-CCCCEEEEEEEEeeCC-------------------------CCcHHHHHHHHHhCCCeEEEE
Confidence 34555555 46 8899999988775433 222346667788889999887
No 344
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=20.88 E-value=37 Score=23.94 Aligned_cols=21 Identities=24% Similarity=0.324 Sum_probs=17.3
Q ss_pred HHHHHHHHHHhccCCCceEEEE
Q 037161 11 CLKLLKNCYESINKEDGKLIVV 32 (99)
Q Consensus 11 ~~~iL~~~~~al~~pgg~l~I~ 32 (99)
...+++.|+++| +|||.++..
T Consensus 310 t~eFy~~~~~~L-~p~GVlv~Q 330 (381)
T 3c6k_A 310 LRLILDLSMKVL-KQDGKYFTQ 330 (381)
T ss_dssp HHHHHHHHHHTE-EEEEEEEEE
T ss_pred HHHHHHHHHHhc-CCCCEEEEe
Confidence 467889999999 999977654
No 345
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=20.88 E-value=1.1e+02 Score=20.75 Aligned_cols=30 Identities=20% Similarity=0.382 Sum_probs=20.2
Q ss_pred cccCChHHHHHHHHHHHHhccCCCceEEEEee
Q 037161 3 LHAWSDEHCLKLLKNCYESINKEDGKLIVVEA 34 (99)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~pgg~l~I~e~ 34 (99)
|-+|+++.. +-|.+..+.- +..+++.|+|.
T Consensus 3 l~~W~~~~~-~~L~~~I~~~-~~~~riAVFD~ 32 (327)
T 4as2_A 3 LEHWPAPAA-RQLNALIEAN-ANKGAYAVFDM 32 (327)
T ss_dssp CTTSCHHHH-HHHHHHHHHH-TTSSCEEEECC
T ss_pred CCCCChHHH-HHHHHHHHhC-CCCCCEEEEeC
Confidence 568987555 4455555554 56689999985
No 346
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=20.87 E-value=88 Score=15.23 Aligned_cols=20 Identities=5% Similarity=-0.217 Sum_probs=15.7
Q ss_pred cCHHHHHHHHHHcCCCeeEE
Q 037161 66 RTKHEFINLATAAGFSGIRF 85 (99)
Q Consensus 66 rt~~e~~~ll~~aGf~~~~~ 85 (99)
-+.++..+.++.+||....+
T Consensus 51 ~~~~~i~~~i~~~Gy~~~~~ 70 (73)
T 1cc8_A 51 LPYDFILEKIKKTGKEVRSG 70 (73)
T ss_dssp SCHHHHHHHHHTTSSCEEEE
T ss_pred CCHHHHHHHHHHhCCCceee
Confidence 35788999999999986543
No 347
>3czp_A Putative polyphosphate kinase 2; PPK2, MCSG, PSI-2, structural protein structure initiative, midwest center for structural genomics; HET: MSE; 2.00A {Pseudomonas aeruginosa PAO1}
Probab=20.84 E-value=1.2e+02 Score=22.04 Aligned_cols=61 Identities=10% Similarity=0.047 Sum_probs=36.0
Q ss_pred HHHHHHHhccCCCceEEEEeeecCCCCCCchhhhhhhhhchHhhhcCCC----ceecCHHHHHHHHHHcCCCeeEEE
Q 037161 14 LLKNCYESINKEDGKLIVVEAVLPELPENSATSKANSQIDVFMLTHSPR----GKVRTKHEFINLATAAGFSGIRFQ 86 (99)
Q Consensus 14 iL~~~~~al~~pgg~l~I~e~~~~~~~~~~~~~~~~~~~dl~m~~~~~~----g~~rt~~e~~~ll~~aGf~~~~~~ 86 (99)
.|.+..+.+ |+.|.++|+|.-.. +.. +..-. +..++. ...+...+|+..|...|..++++.
T Consensus 89 yl~R~~~~l-P~~G~IvIfdRSwY--------s~~--~v~rv-~g~~~~~~~~~~~~~i~~FE~~L~~~g~~i~Kff 153 (500)
T 3czp_A 89 PQWRFWRRL-PPKGRTGIFFGNWY--------SQM--LYARV-EGHIKEAKLDQAIDAAERFERMLCDEGALLFKFW 153 (500)
T ss_dssp TTHHHHHHC-CCTTCEEEEESCHH--------HHH--HHHHH-TTSSCHHHHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhhhHHHhC-CCCCeEEEEeCchh--------hHH--HHHHH-hcCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 467778888 88999999884321 111 11111 111111 134556677888999998887775
No 348
>2kuf_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=20.75 E-value=85 Score=18.09 Aligned_cols=24 Identities=13% Similarity=-0.119 Sum_probs=19.6
Q ss_pred CceecCHHHHHHHHHHcCCCeeEE
Q 037161 62 RGKVRTKHEFINLATAAGFSGIRF 85 (99)
Q Consensus 62 ~g~~rt~~e~~~ll~~aGf~~~~~ 85 (99)
+-.-.+.++-+.+|+++||++...
T Consensus 78 dv~G~~~~~A~~~L~~~Gl~v~~~ 101 (139)
T 2kuf_A 78 DLSGMFWVDAEPRLRALGWTGMLD 101 (139)
T ss_dssp CCCSCCHHHHHHHHHHHTCCSCEE
T ss_pred ccCCCCHHHHHHHHHHcCCceeeE
Confidence 445678999999999999997644
No 349
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=20.72 E-value=1.1e+02 Score=17.40 Aligned_cols=24 Identities=8% Similarity=-0.029 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHhccCCCceEEEEe
Q 037161 9 EHCLKLLKNCYESINKEDGKLIVVE 33 (99)
Q Consensus 9 ~~~~~iL~~~~~al~~pgg~l~I~e 33 (99)
+...++++-+.+++ +.++.++|+=
T Consensus 72 ~~~~~~~~~i~~~~-~~~~~vlVHC 95 (150)
T 4erc_A 72 DQIDRFVQIVDEAN-ARGEAVGVHC 95 (150)
T ss_dssp HHHHHHHHHHHHHH-HTTCEEEEEC
T ss_pred HHHHHHHHHHHHHH-HCCCCEEEEC
Confidence 45667777777777 7788888764
No 350
>2rhq_B Phenylalanyl-tRNA synthetase beta chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_B*
Probab=20.49 E-value=1.9e+02 Score=22.28 Aligned_cols=25 Identities=8% Similarity=0.001 Sum_probs=22.6
Q ss_pred cCHHHHHHHHHHcCCCeeEEEEcCC
Q 037161 66 RTKHEFINLATAAGFSGIRFQCFVC 90 (99)
Q Consensus 66 rt~~e~~~ll~~aGf~~~~~~~~~~ 90 (99)
-|.+|..+.|..+||++..+.+...
T Consensus 16 ~~~~~l~~~lt~~GlEVe~v~~~~~ 40 (795)
T 2rhq_B 16 VKVEDLAERITRTGIEVDNMIDYSK 40 (795)
T ss_dssp SCHHHHHHHHHHTTCEEEEEEETTT
T ss_pred CCHHHHHHHHHhcCccceEEEeccc
Confidence 3799999999999999999998864
No 351
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=20.42 E-value=71 Score=16.82 Aligned_cols=20 Identities=5% Similarity=-0.044 Sum_probs=14.4
Q ss_pred ceecCHHHHHHHHHHcCCCe
Q 037161 63 GKVRTKHEFINLATAAGFSG 82 (99)
Q Consensus 63 g~~rt~~e~~~ll~~aGf~~ 82 (99)
-...|.++..+||+..||..
T Consensus 7 v~~Ws~~~V~~WL~~lgl~~ 26 (81)
T 3bq7_A 7 VHLWGTEEVAAWLEHLSLCE 26 (81)
T ss_dssp GGGCCHHHHHHHHHHTTCGG
T ss_pred hhhCCHHHHHHHHHHCCCHH
Confidence 45667777888888877754
No 352
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=20.27 E-value=1.1e+02 Score=16.11 Aligned_cols=25 Identities=4% Similarity=-0.165 Sum_probs=16.6
Q ss_pred HHHHHHHHHHcCCCeeEEEEcCCCe
Q 037161 68 KHEFINLATAAGFSGIRFQCFVCNS 92 (99)
Q Consensus 68 ~~e~~~ll~~aGf~~~~~~~~~~~~ 92 (99)
...+.+|+++.|+++.....-++.+
T Consensus 50 ~~di~~~~~~~G~~~~~~~~~~~~~ 74 (82)
T 3lvj_C 50 TRDIPGFCTFMEHELVAKETDGLPY 74 (82)
T ss_dssp HHHHHHHHHHTTCEEEEEECSSSSE
T ss_pred HHHHHHHHHHCCCEEEEEEecCCEE
Confidence 3466778888898887765443433
Done!