Query 037166
Match_columns 239
No_of_seqs 166 out of 1812
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 15:47:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037166.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037166hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ip4_A Glutamyl-tRNA(Gln) amid 100.0 9.9E-62 3.4E-66 462.1 18.9 218 9-231 64-299 (485)
2 2gi3_A Glutamyl-tRNA(Gln) amid 100.0 2.2E-61 7.5E-66 458.6 16.8 213 15-230 57-285 (476)
3 2dc0_A Probable amidase; struc 100.0 2.4E-61 8.1E-66 453.9 14.2 208 10-223 58-266 (434)
4 3a1k_A Amidase; AS family enzy 100.0 1.2E-61 4.2E-66 465.1 12.5 217 10-229 81-316 (521)
5 1m22_A Peptide amidase, PAM; e 100.0 6.6E-61 2.2E-65 458.2 16.8 216 10-230 71-311 (503)
6 3h0l_A Glutamyl-tRNA(Gln) amid 100.0 1.2E-60 4.2E-65 454.0 17.0 215 14-231 61-292 (478)
7 3kfu_E Glutamyl-tRNA(Gln) amid 100.0 2.8E-60 9.6E-65 450.9 16.3 210 16-230 57-283 (471)
8 3a2q_A 6-aminohexanoate-cyclic 100.0 7.8E-60 2.7E-64 449.7 14.5 214 14-230 61-299 (493)
9 1o9p_A Malonamidase E2; malona 100.0 6E-59 2E-63 435.4 16.2 209 12-229 49-260 (414)
10 3ppm_A Fatty-acid amide hydrol 100.0 3.3E-58 1.1E-62 445.3 12.6 213 14-229 125-357 (573)
No 1
>3ip4_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} SCOP: c.117.1.1 PDB: 2df4_A 2dqn_A* 2g5h_A 2g5i_A* 2f2a_A
Probab=100.00 E-value=9.9e-62 Score=462.07 Aligned_cols=218 Identities=31% Similarity=0.421 Sum_probs=189.6
Q ss_pred CCCCCCCCccccEEEeecCCCCCCccCCCCcHhhhhcCCCCCCcHHHHHHHHhCCCEEEeccChhhccccCCCCCCCCCC
Q 037166 9 SSSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGT 88 (239)
Q Consensus 9 ~~~~~~gpL~Gvpi~vKD~i~v~G~~tt~Gs~~~~~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~~~~~G~ 88 (239)
..++. ||||||||+|||+|+++|++||+||..+.++ ++.+|+++|+||+++|||++|||||+||+++..+.|+.||+
T Consensus 64 ~~g~~-gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~--~~~~dA~vV~rLr~AGAii~GKTn~~Efa~~~~t~n~~~G~ 140 (485)
T 3ip4_A 64 KDQMD-GKLFGIPMGIKDNIITNGLETTCASKMLEGF--VPIYESTVMEKLHKENAVLIGKLNMDEFAMGGSTETSYFKK 140 (485)
T ss_dssp TTCCC-STTTTCEEEEETTBCBTTBCCCTTSGGGTTC--CCSSCCHHHHHHHHTTCEEEEEECCSGGGCCSSSTTCSSCC
T ss_pred hcCCC-CCcCCCEEEEEcCcccCCCccCCCChhhcCC--CCCCCcHHHHHHHHCCCEEEEecCCcccccCCCCCCCCCCC
Confidence 44666 9999999999999999999999999988764 67899999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCchhhhhhhcCCCcccccccCCCCccccccccCccccccCCCcccCCCCCCCCCCCcccccccCCH
Q 037166 89 PTNPWAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDP 168 (239)
Q Consensus 89 ~~NP~~~~~~~GGSSgGsaaava~g~~~~alGtD~~GSiR~PA~~~Gv~glkPT~g~is~~G~~p~~~s~d~~G~~ar~~ 168 (239)
|+||||+.++||||||||||+||+|++++++|||+|||||+||+||||||||||+|++|+.|++|+++++|++|||+|++
T Consensus 141 t~NP~~~~~~pGGSSgGsAaaVAag~~~~alGtDtgGSIRiPAa~cGv~GlKPT~Grvs~~G~~p~~~sld~~Gp~aRsv 220 (485)
T 3ip4_A 141 TVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNV 220 (485)
T ss_dssp CCBTTBTTBCCCSSSHHHHHHHHTTSCSEEEEECSSSTTHHHHHHTTCEEEECCTTSBCCTTBCCSCTTTCCEEEEESSH
T ss_pred cCCccccCcCCCCCccHHHHHhhcCCCceeeeccCCcchhhhHHHhCCeeecCCCCcccCCCCCCcccccceeccccCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCC----------------CCCCcEEEEecCCccCCCCccHHHHHHHHHHHHHH--hCCCCcccc
Q 037166 169 KILNRVGRVLLQLPDDAS----------------LVRPSQVIFAEDCLQLSSIPSDRITQGLVKSVEKL--FGDCRECDS 230 (239)
Q Consensus 169 ~~l~~~~~~~~~~~~~~~----------------~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~al~~~--~~~~~~~~~ 230 (239)
+|++.++++|.+.+..++ ..+..||+++.+++.. ..+.++.+.+.+++++| +|.+.+.+.
T Consensus 221 ~D~a~~l~vl~g~d~~d~~~~~~~~~~~~~~~~~~~~~lrigv~~~~~~~--~~~~~v~~a~~~a~~~L~~~G~~v~~~~ 298 (485)
T 3ip4_A 221 KDNAIVLEAISGADVNDSTSAPVDDVDFTSEIGKDIKGLKVALPKEYLGE--GVADDVKEAVQNAVETLKSLGAVVEEVS 298 (485)
T ss_dssp HHHHHHHHHHBSCCTTCTTSCCCCCCCCSTTTTCCCTTCEEEEEGGGGST--TSCHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHhcCCCcccccccccCccchhhhhccCccCcEEEEECCcccC--CCCHHHHHHHHHHHHHHHHCCCEEEEeC
Confidence 999999999988765432 1356789999876532 13444445555555444 565544444
Q ss_pred c
Q 037166 231 W 231 (239)
Q Consensus 231 ~ 231 (239)
.
T Consensus 299 ~ 299 (485)
T 3ip4_A 299 L 299 (485)
T ss_dssp C
T ss_pred C
Confidence 3
No 2
>2gi3_A Glutamyl-tRNA(Gln) amidotransferase subunit A; TM1272, structural genomics, joint center for structura genomics, JCSG; HET: MSE MPD; 1.80A {Thermotoga maritima} SCOP: c.117.1.1 PDB: 3al0_A*
Probab=100.00 E-value=2.2e-61 Score=458.62 Aligned_cols=213 Identities=30% Similarity=0.393 Sum_probs=186.6
Q ss_pred CCccccEEEeecCCCCCCccCCCCcHhhhhcCCCCCCcHHHHHHHHhCCCEEEeccChhhccccCCCCCCCCCCCCCCCC
Q 037166 15 LPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWA 94 (239)
Q Consensus 15 gpL~Gvpi~vKD~i~v~G~~tt~Gs~~~~~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~~~~~G~~~NP~~ 94 (239)
+|||||||+|||+|+++|++||+||..|.+. ++.+|+++|+||+++|||++|||||+||+++..+.|++||+|+||||
T Consensus 57 gpL~GvPi~vKD~~~v~G~~Tt~Gs~~~~~~--~~~~dA~vV~rLr~AGAii~GKTn~~Efa~~~~~~n~~~G~t~NP~~ 134 (476)
T 2gi3_A 57 GKFWGIPVAIKDNILTLGMRTTCASRILENY--ESVFDATVVKKMKEAGFVVVGKANLDEFAMGSSTERSAFFPTRNPWD 134 (476)
T ss_dssp STTTTCEEEEETTBCCSSSCCCTTCGGGTTC--CCCSCCHHHHHHHHHTCEEEEEECCSGGGCCSSSTTCSSCCCCBTTB
T ss_pred CCcCCceEEEEcCccCCCCccCccChhhcCC--CCCCChHHHHHHHHCCCEEEEecCchhhhcCCCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999764 67899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCchhhhhhhcCCCcccccccCCCCccccccccCccccccCCCcccCCCCCCCCCCCcccccccCCHHHHHHH
Q 037166 95 PDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPKILNRV 174 (239)
Q Consensus 95 ~~~~~GGSSgGsaaava~g~~~~alGtD~~GSiR~PA~~~Gv~glkPT~g~is~~G~~p~~~s~d~~G~~ar~~~~l~~~ 174 (239)
+.++||||||||||+||+|++++++|||+|||||+||+||||||||||+|++|+.|++|+++++|++|||+|+++|++.+
T Consensus 135 ~~~~pGGSSgGsAaAVAag~~~~alGtDtgGSIRiPAa~cGv~GlKPT~G~vs~~G~~p~~~sld~~Gp~arsv~D~a~~ 214 (476)
T 2gi3_A 135 LERVPGGSSGGSAAAVSAGMVVAALGSDTGGSVRQPASLCGVVGYKPTYGLVSRYGLVAFASSLDQIGPITKTVRDAAIL 214 (476)
T ss_dssp TTBCCCSSSHHHHHHHHTTSSSEEEEEESSSTTHHHHHHHTSEEEECCTTSBCCTTBCCSCTTTCEEEEEESSHHHHHHH
T ss_pred CCCCCCcchHHHHHHHHcCCCceEeecCCCchhhhhHHHcCCeEEeCCCCcCCCCCCCCcccCCCeeeeeeCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCC---------------CCCCcEEEEecCCc-cCCCCccHHHHHHHHHHHHHHhCCCCcccc
Q 037166 175 GRVLLQLPDDAS---------------LVRPSQVIFAEDCL-QLSSIPSDRITQGLVKSVEKLFGDCRECDS 230 (239)
Q Consensus 175 ~~~~~~~~~~~~---------------~~~~~~i~~~~d~~-~~~~~~~~~~~~~~~~al~~~~~~~~~~~~ 230 (239)
+++|.+.+..++ ..+..||+++.+++ ...++++.+.++.+.+.|++ +|.+.+.+.
T Consensus 215 l~~l~g~d~~d~~~~~~p~~~~~~~~~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~-~G~~v~~~~ 285 (476)
T 2gi3_A 215 MEIISGRDENDATTVNRKVDFLSEIEEGVSGMKFAVPEEIYEHDIEEGVSERFEEALKLLER-LGAKVERVK 285 (476)
T ss_dssp HHHHBSCBTTBTTCCSCCCCSSTTTTSCCTTCEEEEEGGGGGSCCCHHHHHHHHHHHHHHHH-TTCEEEEEC
T ss_pred HHHhhCCCCCCccccCCCcchhhhhhcCCCCCEEEEECccccCCCCHHHHHHHHHHHHHHHH-CCCEEEEeC
Confidence 999987654331 13457899988765 33444444455555555544 455544433
No 3
>2dc0_A Probable amidase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=2.4e-61 Score=453.95 Aligned_cols=208 Identities=34% Similarity=0.432 Sum_probs=184.6
Q ss_pred CCCCCCCccccEEEeecCCCCCCccCCCCcHhhhhcCCCCCCcHHHHHHHHhCCCEEEeccChhhccccCCCCCCCCCCC
Q 037166 10 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTP 89 (239)
Q Consensus 10 ~~~~~gpL~Gvpi~vKD~i~v~G~~tt~Gs~~~~~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~~~~~G~~ 89 (239)
.++..||||||||+|||+|+++|++||+||..| +.++.+|+++|+||+++|||++|||||+||+++..+.|++||+|
T Consensus 58 ~g~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~---~~~a~~dA~vV~rL~~aGAii~GKTn~~Efa~~~~~~n~~~G~t 134 (434)
T 2dc0_A 58 RGQVRGPLHGLPLTVKDLFPVKGMPTRAGTKAP---LPPLPEEARAVRRLREAGALLFAKTNMHEIALGITGENPWTGPV 134 (434)
T ss_dssp TTCCCSTTTTCEEEEETTSCBTTBCCCTTCSSC---CCCCCSSCHHHHHHHHTTCEEEEEECCSGGGCCSSCCCTTTCCC
T ss_pred cCCCCCCcCCeeEEEEeccccCCcccCCCCccc---CCCCCCCHHHHHHHHHCCCEEEEEeChhHHhcCCCCCCCCCCCC
Confidence 366789999999999999999999999999988 23448999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCchhhhhhhcCCCcccccccCCCCccccccccCccccccCCCcccCCCCCCCCCCCcccccccCCHH
Q 037166 90 TNPWAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPK 169 (239)
Q Consensus 90 ~NP~~~~~~~GGSSgGsaaava~g~~~~alGtD~~GSiR~PA~~~Gv~glkPT~g~is~~G~~p~~~s~d~~G~~ar~~~ 169 (239)
+||||+.++||||||||||+||+|++++++|||+|||||+||+|||+||||||+|++|+.|++|+++++|++|||+|+++
T Consensus 135 ~NP~~~~~~pGGSSgGsAaaVAag~~~~alGtDtgGSIRiPAa~cGv~GlKPT~G~vs~~g~~~~~~s~d~~Gp~arsv~ 214 (434)
T 2dc0_A 135 RNAVDPSRQAGGSSGGSAVAVALGIGLASLGTDTGGSIRIPAGFNGVVGFKPSYGRVSLEGALPLSRSTDHAGPLTRSVR 214 (434)
T ss_dssp BCSSCTTBBCCSSSHHHHHHHHHTSSSCEEEECSSSTTHHHHHHHTCEEEECSTTSSCCTTSCCSCTTTCCEEEEESSHH
T ss_pred CCCCCCCCCCcccHHHHHHHHHcCCCceeeecCCChhhhhhHHhCCCEEEECCCCCCCCCCCCCCCCccCeeCcccCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCC-CCCCcEEEEecCCccCCCCccHHHHHHHHHHHHHHhC
Q 037166 170 ILNRVGRVLLQLPDDAS-LVRPSQVIFAEDCLQLSSIPSDRITQGLVKSVEKLFG 223 (239)
Q Consensus 170 ~l~~~~~~~~~~~~~~~-~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~al~~~~~ 223 (239)
|++.+++++.+. ..++ ..+..||+++.+.+.. +.++++.+.+.+++++|..
T Consensus 215 D~a~~l~~l~g~-~~d~~~~~~lrig~~~~~~~~--~~~~~v~~a~~~a~~~L~~ 266 (434)
T 2dc0_A 215 DAHFLTEILAGE-SIPLEGVQNPVFGVPLDFLEG--RLGVEVRKAFTRLLEDLPA 266 (434)
T ss_dssp HHHHHHHHHHTS-CCCCCCCCSCEEEECHHHHTT--CSCHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhCC-CCCcccccCCEEEEECccccC--CCCHHHHHHHHHHHHHHHH
Confidence 999999999887 4443 2457889988765421 2345555566666655533
No 4
>3a1k_A Amidase; AS family enzyme, hydrolase; 2.17A {Rhodococcus SP} PDB: 3a1i_A
Probab=100.00 E-value=1.2e-61 Score=465.14 Aligned_cols=217 Identities=26% Similarity=0.415 Sum_probs=190.1
Q ss_pred CCCCCCCccccEEEeecCCCCCCccCCCCcHhhhhcCCCCCCcHHHHHHHHhCCCEEEeccChhhccccCCCCCCCCCCC
Q 037166 10 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTP 89 (239)
Q Consensus 10 ~~~~~gpL~Gvpi~vKD~i~v~G~~tt~Gs~~~~~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~~~~~G~~ 89 (239)
.+...||||||||+|||||+++|++||+||..|.++ ++.+|+++|+||+++|||++|||||+||+++..+.|+.||+|
T Consensus 81 ~g~~~gpL~GvPi~vKD~i~v~G~~Tt~Gs~~~~~~--~~~~DA~vV~rLr~AGAvilGKTn~~Efa~~~~~~n~~~G~t 158 (521)
T 3a1k_A 81 PPTSDGVLTGRRVAIKDNVTVAGVPMMNGSRTVEGF--TPSRDATVVTRLLAAGATVAGKAVCEDLCFSGSSFTPASGPV 158 (521)
T ss_dssp CCSSCCTTTTCEEEEETTBCCTTSCBCTTCTTTTTB--CCSSCCHHHHHHHHTTCEEEEEECCCGGGCCSSSSCCTTCCC
T ss_pred cCCCCCCCCCCEEEEEcCcccCCcccCCCChhhcCC--CCCCchHHHHHHHHCCCEEEEeeChhhHhhCCCCCCCCCCCc
Confidence 356679999999999999999999999999999775 678999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCchhhhhhhcCCCcccccccCCCCccccccccCccccccCCCcccCCCCCCCCCCCcccccccCCHH
Q 037166 90 TNPWAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPK 169 (239)
Q Consensus 90 ~NP~~~~~~~GGSSgGsaaava~g~~~~alGtD~~GSiR~PA~~~Gv~glkPT~g~is~~G~~p~~~s~d~~G~~ar~~~ 169 (239)
+||||+.++||||||||||+||+|++++++|||||||||+||+||||||||||+|++|+.|++|+++++|++|||+|+++
T Consensus 159 ~NP~~~~~~pGGSSgGSAAAVAag~~~~alGtDtgGSIR~PAa~cGvvGlKPT~Grvs~~G~~p~~~sld~~Gp~aRsv~ 238 (521)
T 3a1k_A 159 RNPWDRQREAGGSSGGSAALVANGDVDFAIGGDQGGSIRIPAAFCGVVGHKPTFGLVPYTGAFPIERTIDHLGPITRTVH 238 (521)
T ss_dssp EETTEEEEECCSSSHHHHHHHHTTSSSEEEEEESSSTTHHHHHHHTSEEEECSTTTSCCTTBCCSCGGGCEEEEEESSHH
T ss_pred CCCCCCCCCCCCCCchHHHHHhcCCcceecccCCCCCCCcChHHcCCeeEecCCCcCCCCCCCCcccccCeeCceeCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCC-----------------CCCCcEEEEecCCccCCCCccHHHHHHHHHHHHHH--hCCCCccc
Q 037166 170 ILNRVGRVLLQLPDDAS-----------------LVRPSQVIFAEDCLQLSSIPSDRITQGLVKSVEKL--FGDCRECD 229 (239)
Q Consensus 170 ~l~~~~~~~~~~~~~~~-----------------~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~al~~~--~~~~~~~~ 229 (239)
|++.++++|.+.++.++ ..+..||+++.+++... ..+.++.+.+.+++++| +|.+.+.+
T Consensus 239 D~a~~l~vlag~d~~D~~~~~~~~~~~~~~~l~~~~~~lrIgv~~~~~~~~-~~~~~v~~a~~~a~~~L~~~Ga~v~ev 316 (521)
T 3a1k_A 239 DAALMLSVIAGRDGNDPRQADSVEAGDYLSTLDSDVDGLRIGIVREGFGHA-VSQPEVDDAVRAAAHSLTEIGCTVEEV 316 (521)
T ss_dssp HHHHHHHHHCSCCSSCTTSCTTCCCCCSSTTTTSCCTTCEEEEEGGGSCCS-SSCHHHHHHHHHHHHGGGGGTCEEEEE
T ss_pred HHHHHHHHHhCCCCCCccccccCCCcchhhhhccCccCcEEEEECcccccc-CCCHHHHHHHHHHHHHHHHCCCEEEEe
Confidence 99999999988654332 12457899988765422 13455666666666665 34444333
No 5
>1m22_A Peptide amidase, PAM; eleven-stranded beta sheet, covered double layers of alpha helices on TOP and bottom, hydrolase; HET: EPE; 1.40A {Stenotrophomonas maltophilia} SCOP: c.117.1.1 PDB: 1m21_A*
Probab=100.00 E-value=6.6e-61 Score=458.20 Aligned_cols=216 Identities=28% Similarity=0.348 Sum_probs=191.2
Q ss_pred CCCCCCCccccEEEeecCCCCCCccCCCCcHhhhhcCCCCCCcHHHHHHHHhCCCEEEeccChhhccc-----cCCCCCC
Q 037166 10 SSAHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAY-----SINGENK 84 (239)
Q Consensus 10 ~~~~~gpL~Gvpi~vKD~i~v~G~~tt~Gs~~~~~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~-----~~~~~~~ 84 (239)
.+...+|||||||+|||||+++|++||+||..|.++ ++ +|+++|+||+++|||++|||||+||++ +..+.|+
T Consensus 71 ~g~~~gpL~GvPi~vKD~~~v~G~~Tt~Gs~~~~~~--~~-~dA~vV~rLr~AGAii~GKTn~~Efa~~~~~~~~~~~n~ 147 (503)
T 1m22_A 71 DGRLRGPLHGIPLLLKDNINAAPMATSAGSLALQGF--RP-DDAYLVRRLRDAGAVVLGKTNLSEWANFRGNDSISGWSA 147 (503)
T ss_dssp TTCCCSTTTTCEEEEETTBCCTTSCCCTTCGGGTTC--CC-CCCHHHHHHHHTTCEEEEEECCSHHHHCSCTTCCTTEET
T ss_pred cCCCCCCcCCceeEeecccccCCCCcCCCCHhhcCC--CC-CCcHHHHHHHHCCCEEEeccCHHHHhcccCCCCCCCCCC
Confidence 456789999999999999999999999999999874 66 999999999999999999999999998 6788999
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhhhhcCCCcccccccCCCCccccccccCccccccCCCcccCCCCCCCCCCCcccccc
Q 037166 85 HYGTPTNPWAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWF 164 (239)
Q Consensus 85 ~~G~~~NP~~~~~~~GGSSgGsaaava~g~~~~alGtD~~GSiR~PA~~~Gv~glkPT~g~is~~G~~p~~~s~d~~G~~ 164 (239)
+||+|+||||+.++||||||||||+||+|++++++|||||||||+||+||||||||||+|++|+.|++|+++++|++|||
T Consensus 148 ~~G~t~NP~~~~~~pGGSSgGsAaAVAag~~~~alGtDtgGSIRiPAa~cGvvGlKPT~Grvs~~G~~p~~~sld~~Gp~ 227 (503)
T 1m22_A 148 RGGQTRNPYRISHSPCGSSSGSAVAVAANLASVAIGTETDGSIVCPAAINGVVGLKPTVGLVSRDGIIPISFSQDTAGPM 227 (503)
T ss_dssp TTEECCCTTSTTBCCCSSSHHHHHHHHTTSSSEEEEEESSSTTHHHHHHTTSEEEECCTTSSCCTTBCCSCTTTCEEEEE
T ss_pred CCCCCCCCCCCCCCCCccHHHHHHHHHcCCCceeeecCCCchhhhhHHHhCceEEECCCCCcCCCCcCCccCCCCeeCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHhcCCCCCCC--------------------CCCCcEEEEecCCccCCCCccHHHHHHHHHHHHHHhCC
Q 037166 165 AWDPKILNRVGRVLLQLPDDAS--------------------LVRPSQVIFAEDCLQLSSIPSDRITQGLVKSVEKLFGD 224 (239)
Q Consensus 165 ar~~~~l~~~~~~~~~~~~~~~--------------------~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~al~~~~~~ 224 (239)
+|+++|+..++++|.+.+..++ ..+..||+++.+.+. .++++.+.++.+.+.|+++ |.
T Consensus 228 arsv~D~a~~l~vl~g~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~lrIgv~~~~~~-~~~~v~~a~~~a~~~L~~~-G~ 305 (503)
T 1m22_A 228 ARSVADAAAVLTAIAGRDDADPATATMPGRAVYDYTARLDPQGLRGKRIGLLQTPLL-KYRGMPPLIEQAATELRRA-GA 305 (503)
T ss_dssp ESSHHHHHHHHHHHCCCCTTCGGGGGCTTCCCCCGGGGCCTTTTTTCEEEEECSGGG-GSTTHHHHHHHHHHHHHHT-TC
T ss_pred cCCHHHHHHHHHHHcCCCCCCccccccccccccchhhhccccCCCCCEEEEECcccc-CCHHHHHHHHHHHHHHHHc-CC
Confidence 9999999999999987654431 134678999887763 5566666676666666654 65
Q ss_pred CCcccc
Q 037166 225 CRECDS 230 (239)
Q Consensus 225 ~~~~~~ 230 (239)
+.+.+.
T Consensus 306 ~v~~~~ 311 (503)
T 1m22_A 306 VVVPVE 311 (503)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 544343
No 6
>3h0l_A Glutamyl-tRNA(Gln) amidotransferase subunit A; multi protein complex, ligase, protein biosynthesis; HET: ADP; 2.30A {Aquifex aeolicus} PDB: 3h0m_A 3h0r_A*
Probab=100.00 E-value=1.2e-60 Score=453.99 Aligned_cols=215 Identities=32% Similarity=0.472 Sum_probs=188.0
Q ss_pred CCCccccEEEeecCCCCCCccCCCCcHhhhhcCCCCCCcHHHHHHHHhCCCEEEeccChhhccccCCCCCCCCCCCCCCC
Q 037166 14 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPW 93 (239)
Q Consensus 14 ~gpL~Gvpi~vKD~i~v~G~~tt~Gs~~~~~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~~~~~G~~~NP~ 93 (239)
.||||||||+|||+|+++|++||+||..+.++ ++.+|+++|+||+++|||++|||||+||+++..+.|+.||+|+|||
T Consensus 61 ~gpL~GvPi~vKD~~~~~G~~tt~Gs~~~~~~--~~~~da~~V~rL~~aGaii~GKTn~~E~~~~~~~~n~~~G~t~NP~ 138 (478)
T 3h0l_A 61 ELPLFGIPIAVKDNILVEGEKTTCASKILENF--VAPYDATVIERLKKAGALIVGKTNLDEFAMGSSTEYSAFFPTKNPW 138 (478)
T ss_dssp TSTTTTCEEEEETTBCCTTSBCCTTCGGGTTC--BCSSCCHHHHHHHHTTCEEEEEECCSGGGCCSSSTTCSSCCCCCTT
T ss_pred cCCcCCceEEEEcCccCCCCCcCCcCHhhcCC--CCCCCHHHHHHHHHCCCEEEEEeCchhhhcCCCCCCCCCCCcCCCc
Confidence 79999999999999999999999999988764 6789999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCchhhhhhhcCCCcccccccCCCCccccccccCccccccCCCcccCCCCCCCCCCCcccccccCCHHHHHH
Q 037166 94 APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPKILNR 173 (239)
Q Consensus 94 ~~~~~~GGSSgGsaaava~g~~~~alGtD~~GSiR~PA~~~Gv~glkPT~g~is~~G~~p~~~s~d~~G~~ar~~~~l~~ 173 (239)
|+.++|||||||||++||+|++++++|||+|||||+||+||||||||||+|++|+.|++|+++++|++|+|+|+++|+..
T Consensus 139 ~~~~~~GGSSgGsaaaVAag~~~~a~GtDtgGSiR~PAa~cGv~GlKPT~G~v~~~g~~~~~~~~d~~Gp~arsv~D~a~ 218 (478)
T 3h0l_A 139 DLERVPGGSSGGSAASVAVLSAPVSLGSDTGGSIRQPASFCGVIGIKPTYGRVSRYGLVAFASSLDQIGVFGRRTEDVAL 218 (478)
T ss_dssp CTTBCCCSSSHHHHHHHHHTSSSCEEEECSSSTTHHHHHHHTCEEEECCTTSBCCTTBCCSCTTTCCEEEEESSHHHHHH
T ss_pred cCCCCCCcchHHHHHHHHCCCCceeeecCCCCcchhhhHHhCCeeEeCCCCcccCCCCCCCccCCCeecceeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCC----------------CCCCcEEEEecCCcc-CCCCccHHHHHHHHHHHHHHhCCCCccccc
Q 037166 174 VGRVLLQLPDDAS----------------LVRPSQVIFAEDCLQ-LSSIPSDRITQGLVKSVEKLFGDCRECDSW 231 (239)
Q Consensus 174 ~~~~~~~~~~~~~----------------~~~~~~i~~~~d~~~-~~~~~~~~~~~~~~~al~~~~~~~~~~~~~ 231 (239)
++++|.+.+..++ ..+..||+++.+++. ..++++.+.++.+.+.|++ +|.+.+.+.+
T Consensus 219 ~l~vl~g~d~~d~~~~~~p~~~~~~~~~~~~~~lrIgv~~~~~~~~~~p~v~~a~~~a~~~L~~-~G~~v~~v~~ 292 (478)
T 3h0l_A 219 VLEVISGWDEKDSTSAKVPVPEWSEEVKKEVKGLKIGLPKEFFEYELQPQVKEAFENFIKELEK-EGFEIKEVSL 292 (478)
T ss_dssp HHHHHBSCCTTCTTSCCCCCCCHHHHTTCCCTTCEEEEEGGGGGSCCCHHHHHHHHHHHHHHHH-TTCEEEEECC
T ss_pred HHHHhcCCCcccccccccCccchhhhhccCCCCCEEEEECCcccCCCCHHHHHHHHHHHHHHHH-CCCEEEEeCC
Confidence 9999998765442 135678999887653 2333444444444444443 5655544443
No 7
>3kfu_E Glutamyl-tRNA(Gln) amidotransferase subunit A; ASPRS, gatcab, ATP-binding, aminoacyl-tRNA synthetase, ligas nucleotide-binding, protein biosynthesis, ligase-RNA comple; HET: H2U 5MU PSU; 3.00A {Thermus thermophilus}
Probab=100.00 E-value=2.8e-60 Score=450.86 Aligned_cols=210 Identities=33% Similarity=0.485 Sum_probs=186.2
Q ss_pred CccccEEEeecCCCCCCccCCCCcHhhhhcCCCCCCcHHHHHHHHhCCCEEEeccChhhccccCCCCCCCCCCCCCCCCC
Q 037166 16 PLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPWAP 95 (239)
Q Consensus 16 pL~Gvpi~vKD~i~v~G~~tt~Gs~~~~~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~~~~~G~~~NP~~~ 95 (239)
|||||||+|||+|+++|++||+||..|.++ ++.+|+++|+||+++|||++|||||+||+++..+.|+.||+|+||||+
T Consensus 57 pL~GvPi~vKD~~~~~G~~tt~Gs~~~~~~--~~~~da~~V~rL~~aGaii~GKTn~~E~~~~~~~~n~~~G~t~NP~~~ 134 (471)
T 3kfu_E 57 PLAGLVVAVKDNIATRGLRTTAGSRLLENF--VPPYEATAVARLKALGALVLGKTNLDEFGMGSSTEHSAFFPTKNPFDP 134 (471)
T ss_dssp TTTTCEEEEETTBCCTTSCCCTTCSTTTTC--CCSSCCHHHHHHHTTTCEEEEEECCSGGGCCSSSTTCSSCCCCBTTBT
T ss_pred CcCCCeEEEECCcccCCccccccCHhHcCC--CCCCChHHHHHHHHCCCEEEeecCcCchhcCCCCCCCCCCCcCCCCcc
Confidence 999999999999999999999999988774 678999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCchhhhhhhcCCCcccccccCCCCccccccccCccccccCCCcccCCCCCCCCCCCcccccccCCHHHHHHHH
Q 037166 96 DRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPKILNRVG 175 (239)
Q Consensus 96 ~~~~GGSSgGsaaava~g~~~~alGtD~~GSiR~PA~~~Gv~glkPT~g~is~~G~~p~~~s~d~~G~~ar~~~~l~~~~ 175 (239)
.++|||||||||++||+|++++++|||+|||||+||+|||+||||||+|++|+.|++|+++++|++|+|+|+++|+..++
T Consensus 135 ~~~~GGSSgGsaaaVAag~~~~a~GtDtgGSiR~PAa~cGv~GlKPT~G~v~~~g~~~~~~~~d~~Gp~arsv~D~a~~~ 214 (471)
T 3kfu_E 135 DRVPGGSSGGSAAALAADLAPLALGSDTGGSVRQPAAFCGVYGLKPTYGRVSRFGLIAYASSLDQIGPMARSVRDLALLM 214 (471)
T ss_dssp TBCCCSSSHHHHHHHHTTSCSEEEEEESSSTTHHHHHHTTCEEEECCTTSSCCTTBCCSCTTTCEEEEEESSHHHHHHHH
T ss_pred CcCCCCCcHHHHHHHHCCCCccccccCCCCccccChhhcCceeeeCCCCCccCCCCCCcccccCeecceeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCC---------------CCCCcEEEEecCCccCCCCccHHHHHHHHHHHHHH--hCCCCcccc
Q 037166 176 RVLLQLPDDAS---------------LVRPSQVIFAEDCLQLSSIPSDRITQGLVKSVEKL--FGDCRECDS 230 (239)
Q Consensus 176 ~~~~~~~~~~~---------------~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~al~~~--~~~~~~~~~ 230 (239)
+++.+.+..++ ..+..||+++.+++.. .++++.+.+.+++++| +|.+.+.+.
T Consensus 215 ~~l~g~d~~d~~~~~~~~~~~~~~~~~~~~lrIgv~~~~~~~---~~p~v~~a~~~a~~~L~~~G~~v~~v~ 283 (471)
T 3kfu_E 215 DAAAGPDPLDATSLDLPPRFQEALEGPLPPLRLGVVREALAG---NSPGVERALEEALKVFRELGLSVREVS 283 (471)
T ss_dssp HHHCSCCTTCTTCCCCCCCTTCCSCCCCSSCEEEEEGGGTTT---CCHHHHHHHHHHHHHHHTTTCEEEEEC
T ss_pred HHhcCCCcccccccCCCcchhhhhccCCCCCEEEEECCccCC---CCHHHHHHHHHHHHHHHHcCCeeeeec
Confidence 99987664432 1356789999877633 3455555555555555 455444443
No 8
>3a2q_A 6-aminohexanoate-cyclic-dimer hydrolase; alpha/beta fold, nylon degradation; 1.80A {Arthrobacter SP} PDB: 3a2p_A
Probab=100.00 E-value=7.8e-60 Score=449.68 Aligned_cols=214 Identities=24% Similarity=0.329 Sum_probs=185.6
Q ss_pred CCCccccEEEeecCC-CCCCccCCCCcHhhh--hcCCCCCCcHHHHHHHHhCCCEEEeccChhhccccCCCCCCCCCCCC
Q 037166 14 QLPLSGLTFAIKDIF-DVDGHVTGFGNPDWA--RTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPT 90 (239)
Q Consensus 14 ~gpL~Gvpi~vKD~i-~v~G~~tt~Gs~~~~--~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~~~~~G~~~ 90 (239)
.||||||||+|||+| +++|++||+||..|. ++ ++.+|+++|+||+++|||++|||||+||+++..+.|++||+|+
T Consensus 61 ~gpL~GvPi~vKD~~~~v~G~~Tt~Gs~~~~~~~~--~~~~dA~vV~rLr~AGAii~GKTn~~Efa~~~~~~n~~~G~t~ 138 (493)
T 3a2q_A 61 SGPFAGVPYLLKDLTVVSQGDINTSSIKGMKESGY--RADHDAYFVQRMRAAGFVLLGKTNTPEMGNQVTTEPEAWGATR 138 (493)
T ss_dssp CSTTTTCEEEEESSSSCCTTSBCCTTCHHHHHHTC--BCSSCCHHHHHHHHHTCEEEEEECCSGGGCSSSCCCTTTCCCC
T ss_pred CCCcCCcEEEEecCCcCcCCCcccccChhhhhcCC--CCCCCHHHHHHHHHCCCceEEEcChhhhhcCCCCCCCCCCCCC
Confidence 599999999999999 999999999999998 53 6789999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCchhhhhhhcCCCcccccccCCCCccccccccCccccccCCCcccCCCC--C-CCCCCCcccccccCC
Q 037166 91 NPWAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGV--I-PMAQSFDTVGWFAWD 167 (239)
Q Consensus 91 NP~~~~~~~GGSSgGsaaava~g~~~~alGtD~~GSiR~PA~~~Gv~glkPT~g~is~~G~--~-p~~~s~d~~G~~ar~ 167 (239)
||||+.++||||||||||+||+|++++++|||+|||||+||+||||||||||+|++|+.|+ . ++++++|++|+|+|+
T Consensus 139 NP~~~~~~pGGSSgGsAAAVAaG~~~~alGtDtgGSIRiPAa~cGv~GlKPT~Grvs~~g~~~~~~~~~sld~~Gp~ars 218 (493)
T 3a2q_A 139 NPWNLGRSVGGSSGGSGAAVAAALSPVAHGNDAAGAVRIPASVCGVVGLKPTRGRISPGPLVTDSDNVAGAAHEGLFARS 218 (493)
T ss_dssp BTTBTTBCCCSSSHHHHHHHHTTSCSEEEEEESSSTTHHHHHHHTSEEEECSTTSBCCCSSCCHHHHHHTTCEEEEEESS
T ss_pred CCCCCCCCCCcCcHHHHHHHHcCCCceeeecCCCcccccchhhcCcceEEcCCCccCCCCCcccccccccCceecCccCC
Confidence 9999999999999999999999999999999999999999999999999999999999998 5 777899999999999
Q ss_pred HHHHHHHHHHhcCCCCCCC----------------CCCCcEEEEecCCc---cCCCCccHHHHHHHHHHHHHHhCCCCcc
Q 037166 168 PKILNRVGRVLLQLPDDAS----------------LVRPSQVIFAEDCL---QLSSIPSDRITQGLVKSVEKLFGDCREC 228 (239)
Q Consensus 168 ~~~l~~~~~~~~~~~~~~~----------------~~~~~~i~~~~d~~---~~~~~~~~~~~~~~~~al~~~~~~~~~~ 228 (239)
++|++.++++|.+.+..++ ..+..||+++.+.+ ...++++.+.++.+.+.|++ .|.+.+.
T Consensus 219 v~D~a~~l~~l~g~d~~d~~~~~~p~~~~~~~~~~~~~~lrIgv~~~~~~~~~~~~~~v~~a~~~a~~~L~~-~G~~v~~ 297 (493)
T 3a2q_A 219 VRDIAALLDVVSGHRPGDTFCAPTASRPYAQGISENPGSLRVGVLTHNPVGDFALDPECAAAARGAAAALAA-LGHDVND 297 (493)
T ss_dssp HHHHHHHHHHHBSCCTTCSCCCCCCSSCHHHHTTSCCCSCEEEECCSCTTCSSCCCHHHHHHHHHHHHHHHH-TTCEEEE
T ss_pred HHHHHHHHHHHcCCCCCCcccccCCCcchhhhcccCCCCCEEEEECCccccCCCCCHHHHHHHHHHHHHHHH-CCCEEEE
Confidence 9999999999988654331 13467899988764 23444444555555555544 4555444
Q ss_pred cc
Q 037166 229 DS 230 (239)
Q Consensus 229 ~~ 230 (239)
+.
T Consensus 298 ~~ 299 (493)
T 3a2q_A 298 AY 299 (493)
T ss_dssp CC
T ss_pred eC
Confidence 43
No 9
>1o9p_A Malonamidase E2; malonate; 1.8A {Bradyrhizobium japonicum} SCOP: c.117.1.1 PDB: 1o9o_A 1obl_A 1och_A 1obk_A 1obi_A 1o9q_A* 1obj_A 1o9n_A 1ock_A 1ocl_A 1ocm_A
Probab=100.00 E-value=6e-59 Score=435.38 Aligned_cols=209 Identities=31% Similarity=0.428 Sum_probs=180.0
Q ss_pred CCCCCccccEEEeecCCCCCCccCCCCcHhhhhcCCCCCCcHHHHHHHHhCCCEEEeccChhhccccCCCCCCCCCCCCC
Q 037166 12 AHQLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTN 91 (239)
Q Consensus 12 ~~~gpL~Gvpi~vKD~i~v~G~~tt~Gs~~~~~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~~~~~G~~~N 91 (239)
...+|||||||+|||+|+++|++||+|+..|.++ ++.+|+++|+||+++|||++|||||+||++ .|+ |+|+|
T Consensus 49 ~~~gpL~GvPi~vKD~~~v~G~~tt~Gs~~~~~~--~~~~dA~~V~rL~~aGAii~GKTn~~Efa~----~n~--G~t~N 120 (414)
T 1o9p_A 49 QASGPLRGIAVGIKDIIDTANMPTEMGSEIYRGW--QPRSDAPVVMMLKRAGATIIGKTTTTAFAS----RDP--TATLN 120 (414)
T ss_dssp CSSSTTTTCEEEEETTBCCSSSCCCTTSGGGTTC--CCSSCCHHHHHHHHTTCEEEEEECCCGGGS----SCC--CSCCB
T ss_pred ccCCCcCCCEEEEEcccccCCcccCcCCHhhccC--CCCCCHHHHHHHHHCCCEEEEecCCchhhc----CCC--CCCCC
Confidence 4579999999999999999999999999999874 677999999999999999999999999998 344 99999
Q ss_pred CCCCCCCCCCCCchhhhhhhcCCCcccccccCCCCccccccccCccccccCCCcccCCCCCCCCCCCcccccccCCHHHH
Q 037166 92 PWAPDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQSFDTVGWFAWDPKIL 171 (239)
Q Consensus 92 P~~~~~~~GGSSgGsaaava~g~~~~alGtD~~GSiR~PA~~~Gv~glkPT~g~is~~G~~p~~~s~d~~G~~ar~~~~l 171 (239)
|||+.++||||||||||+||+|++++++|||+|||||+||+|||+||||||+|++|+.|++|+++++|++|||+|+++|+
T Consensus 121 P~~~~~~pGGSSgGsAaaVAag~~~~alGtDtgGSIRiPAa~cGv~GlKPT~G~vs~~G~~~~~~s~d~~Gp~arsv~D~ 200 (414)
T 1o9p_A 121 PHNTGHSPGGASSGSAAAVGAGMIPLALGTQTGGSVIRPAAYCGTAAIKPSFRMLPTVGVKCYSWALDTVGLFGARAEDL 200 (414)
T ss_dssp TTBTTBCCCSSSHHHHHHHHTTSCSEEEEEESSSTTHHHHHHHTCEEEECSTTSSCCTTBCCSCTTTCEEEEEESSHHHH
T ss_pred CCCCCCCCCcchHHHHHHHHcCCCceEEeeCCchhhhHhHHHhCCeeEECCCCCCCCCCCCCCCCccCeeccccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCC--CCCCCCcEEEEecCCc-cCCCCccHHHHHHHHHHHHHHhCCCCccc
Q 037166 172 NRVGRVLLQLPDD--ASLVRPSQVIFAEDCL-QLSSIPSDRITQGLVKSVEKLFGDCRECD 229 (239)
Q Consensus 172 ~~~~~~~~~~~~~--~~~~~~~~i~~~~d~~-~~~~~~~~~~~~~~~~al~~~~~~~~~~~ 229 (239)
..+++++.+.+.. ....+..||+++.+.+ ...++++.+.++.+.+.|++ .|.+.+.+
T Consensus 201 a~~~~~l~g~~~~~~~~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~-~G~~v~~~ 260 (414)
T 1o9p_A 201 ARGLLAMTGRSEFSGIVPAKAPRIGVVRQEFAGAVEPAAEQGLQAAIKAAER-AGASVQAI 260 (414)
T ss_dssp HHHHHHHHCCGGGSSCCCCSSCEEEECCCGGGCCCCHHHHHHHHHHHHHHHH-TTCEEEEC
T ss_pred HHHHHHhcCCCccccccCCCCCEEEEECccccCCCCHHHHHHHHHHHHHHHH-CCCEEEEe
Confidence 9999999876521 1124567898887654 33444455555555555555 46554444
No 10
>3ppm_A Fatty-acid amide hydrolase 1; protein-inhibitor complex, FAAH, oxazole, oxadiazole, endoca degradation, membrane protein; HET: JG1 1DO; 1.78A {Rattus norvegicus} PDB: 2wj2_A* 3k7f_A* 3k83_A* 3k84_A* 3lj6_A* 3lj7_A 3oj8_A* 2wj1_A* 3pr0_A* 2wap_A* 1mt5_A* 2vya_A* 3qk5_A* 3qj8_A* 3qj9_A* 3qkv_A*
Probab=100.00 E-value=3.3e-58 Score=445.33 Aligned_cols=213 Identities=26% Similarity=0.368 Sum_probs=183.1
Q ss_pred CCCccccEEEeecCCCCCCccCCCCcHhhhhcCCCCCCcHHHHHHHHhCCCEEEeccChhhccccCCCCCCCCCCCCCCC
Q 037166 14 QLPLSGLTFAIKDIFDVDGHVTGFGNPDWARTHSAATSTAPAVLAVLSGGATSIGKTIMDEMAYSINGENKHYGTPTNPW 93 (239)
Q Consensus 14 ~gpL~Gvpi~vKD~i~v~G~~tt~Gs~~~~~~~~~~~~da~~V~~L~~aGAi~~gkt~~~e~~~~~~~~~~~~G~~~NP~ 93 (239)
.||||||||+|||+|+++|++||+|+..|.+. ++.+|+++|++|+++|||++||||||||+++..+.|+.||+|+|||
T Consensus 125 ~gpL~GvPi~vKD~~~~~G~~tt~Gs~~~~~~--~~~~da~vV~~L~~aGAv~~gKTn~pe~~~~~~~~n~~~G~t~NP~ 202 (573)
T 3ppm_A 125 QGLLYGVPVSLKECFSYKGHDSTLGLSLNEGM--PSESDCVVVQVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTMNPW 202 (573)
T ss_dssp TCTTTTCEEEEETTBCCBTCCCCTTCGGGTTC--CBSSCCHHHHHHHHTTCEEEEEECCCTTSCSSSCEETTTEECCCTT
T ss_pred cCCcCCCeEEEEcccCCCCCCcCCcChhhcCC--CCCcchHHHHHHHHCCCEEEEecCCccccccCCCCCCCCCCcCCCC
Confidence 49999999999999999999999999998774 6889999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCchhhhhhhcCCCcccccccCCCCccccccccCccccccCCCcccCCCCCCCCCC----CcccccccCCHH
Q 037166 94 APDRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTAGVIPMAQS----FDTVGWFAWDPK 169 (239)
Q Consensus 94 ~~~~~~GGSSgGsaaava~g~~~~alGtD~~GSiR~PA~~~Gv~glkPT~g~is~~G~~p~~~s----~d~~G~~ar~~~ 169 (239)
|+.++||||||||||+||+|++++|+|||+|||||+||+||||||||||+||+|+.|++|.+++ +|++|||+|+++
T Consensus 203 ~~~~~~GGSSgGsaaaVAag~~~~alGtDtgGSIRiPAa~cGv~GlKPT~Grvs~~G~~~~~~~~~~~~~~~Gp~arsv~ 282 (573)
T 3ppm_A 203 KSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVE 282 (573)
T ss_dssp CTTBCCCSSSHHHHHHHHTTSCSEEEEEESSSTTHHHHHHHTCEEEECCGGGSCCTTBCCSCCSCCSSCCEEEEEESSHH
T ss_pred CCCCCCCCCCchHHHHHHcCCCcEEEecCCCcchhhhhHHhCeeEEeCCCCcccCCCCCCcccccCcccccccceeCcHH
Confidence 9999999999999999999999999999999999999999999999999999999999998875 899999999999
Q ss_pred HHHHHHHHhcCCC------------CCC---CCCCCcEEEEecC-CccCCCCccHHHHHHHHHHHHHHhCCCCccc
Q 037166 170 ILNRVGRVLLQLP------------DDA---SLVRPSQVIFAED-CLQLSSIPSDRITQGLVKSVEKLFGDCRECD 229 (239)
Q Consensus 170 ~l~~~~~~~~~~~------------~~~---~~~~~~~i~~~~d-~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~ 229 (239)
|+..+++++.+.+ +.+ ...++.||++..+ .+...++++.++++.+.+.|++ .|.+.+.+
T Consensus 283 D~a~~l~~l~~~d~~~~d~~~~~~~~~~~~~~~~~~lrigv~~~~~~~~~~p~v~~a~~~a~~~L~~-~G~~v~~~ 357 (573)
T 3ppm_A 283 SLALCLKALLCEHLFTLDPTVPPLPFREEVYRSSRPLRVGYYETDNYTMPSPAMRRALIETKQRLEA-AGHTLIPF 357 (573)
T ss_dssp HHHHHHHHHSSHHHHHHCTTSCCCCCCHHHHTCCCCCEEEECSCCSSSCCCHHHHHHHHHHHHHHHH-TTCEEEEC
T ss_pred HHHHHHHHHhcccccccCCCCCccccchhhcccCCCCEEEEEcccCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEe
Confidence 9999999886532 110 1245778988764 3444444555555555555544 45554433
Done!