Query 037168
Match_columns 466
No_of_seqs 554 out of 4164
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 15:49:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037168.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037168hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1oy3_D Transcription factor in 100.0 5E-39 1.7E-43 306.9 17.8 229 21-280 2-271 (282)
2 3utm_A Tankyrase-1; tankyrase, 100.0 2.5E-38 8.5E-43 311.4 20.9 246 3-280 34-326 (351)
3 3b7b_A Euchromatic histone-lys 100.0 7.5E-38 2.6E-42 291.5 21.6 221 19-279 2-222 (237)
4 3d9h_A CDNA FLJ77766, highly s 100.0 6.3E-38 2.1E-42 301.1 19.5 232 2-276 24-264 (285)
5 1yyh_A HN1;, notch 1, ankyrin 100.0 2.9E-38 1E-42 297.9 15.1 219 20-278 2-234 (253)
6 1k1a_A B-cell lymphoma 3-encod 100.0 6.7E-38 2.3E-42 292.2 16.1 225 21-278 2-227 (241)
7 1wdy_A 2-5A-dependent ribonucl 100.0 6.8E-37 2.3E-41 291.9 22.7 235 3-278 15-264 (285)
8 2xai_A ASB-9, ankyrin repeat a 100.0 3.1E-37 1E-41 292.4 17.6 197 3-225 13-209 (261)
9 4b93_B Ankyrin repeat domain-c 100.0 8E-38 2.7E-42 297.8 11.9 220 23-277 6-228 (269)
10 3aji_A 26S proteasome non-ATPa 100.0 9.8E-37 3.3E-41 282.8 18.7 210 3-235 16-225 (231)
11 3aji_A 26S proteasome non-ATPa 100.0 2.5E-36 8.6E-41 280.0 21.4 215 25-279 3-217 (231)
12 2xai_A ASB-9, ankyrin repeat a 100.0 2.4E-36 8.1E-41 286.2 20.9 185 27-235 2-186 (261)
13 1s70_B 130 kDa myosin-binding 100.0 3.1E-37 1E-41 297.6 14.9 238 3-280 8-278 (299)
14 2dzn_A Probable 26S proteasome 100.0 1.7E-36 5.8E-41 280.4 18.9 213 28-276 2-217 (228)
15 1yyh_A HN1;, notch 1, ankyrin 100.0 1.3E-36 4.5E-41 286.5 18.0 208 5-234 35-242 (253)
16 1n11_A Ankyrin; clathrin, BAND 100.0 7.1E-36 2.4E-40 303.9 22.1 239 4-278 124-388 (437)
17 2f8y_A Notch homolog 1, transl 100.0 2.5E-36 8.5E-41 278.5 16.4 193 21-234 18-210 (223)
18 3b7b_A Euchromatic histone-lys 100.0 2E-35 6.9E-40 275.0 20.2 206 3-231 21-226 (237)
19 1k1a_A B-cell lymphoma 3-encod 100.0 2.8E-35 9.5E-40 274.4 21.1 211 3-234 19-235 (241)
20 1ikn_D Protein (I-kappa-B-alph 100.0 7.7E-37 2.6E-41 284.8 9.3 225 22-275 2-227 (236)
21 4b93_B Ankyrin repeat domain-c 100.0 1.6E-35 5.3E-40 281.9 16.0 204 2-227 20-230 (269)
22 2dzn_A Probable 26S proteasome 100.0 9.4E-35 3.2E-39 268.7 20.8 207 2-227 11-220 (228)
23 3ljn_A Hypothetical protein; a 100.0 1.4E-35 4.6E-40 294.6 16.2 231 16-278 8-255 (364)
24 1n11_A Ankyrin; clathrin, BAND 100.0 1.2E-34 4E-39 294.9 22.5 250 3-278 90-355 (437)
25 3kea_A K1L; tropism, ANK repea 100.0 6E-35 2.1E-39 280.4 18.3 205 3-236 9-216 (285)
26 2fo1_E LIN-12 protein; beta-ba 100.0 1.6E-35 5.6E-40 295.3 13.5 226 20-278 116-357 (373)
27 1oy3_D Transcription factor in 100.0 1.5E-34 5.2E-39 275.8 18.6 204 3-227 19-270 (282)
28 2rfa_A Transient receptor pote 100.0 2.4E-34 8.4E-39 266.9 18.2 199 27-234 2-216 (232)
29 3d9h_A CDNA FLJ77766, highly s 100.0 5.5E-34 1.9E-38 273.7 21.1 204 3-234 69-272 (285)
30 3eu9_A Huntingtin-interacting 100.0 4.3E-34 1.5E-38 265.6 18.5 218 21-278 2-221 (240)
31 4g8k_A 2-5A-dependent ribonucl 100.0 2E-33 6.7E-38 276.0 23.2 242 3-278 35-284 (337)
32 3hra_A Ankyrin repeat family p 100.0 1E-33 3.6E-38 256.6 18.9 191 25-234 2-197 (201)
33 1wdy_A 2-5A-dependent ribonucl 100.0 1.7E-33 5.8E-38 268.3 21.1 209 3-234 49-272 (285)
34 2fo1_E LIN-12 protein; beta-ba 100.0 8.7E-34 3E-38 282.8 18.5 204 18-234 156-365 (373)
35 3ljn_A Hypothetical protein; a 100.0 4.9E-34 1.7E-38 283.3 16.0 208 3-235 30-264 (364)
36 1s70_B 130 kDa myosin-binding 100.0 6.2E-34 2.1E-38 274.4 16.2 207 3-226 50-276 (299)
37 3utm_A Tankyrase-1; tankyrase, 100.0 5E-34 1.7E-38 280.6 14.8 220 19-278 15-291 (351)
38 3eu9_A Huntingtin-interacting 100.0 5.9E-33 2E-37 258.0 18.8 208 3-234 19-229 (240)
39 4gpm_A Engineered protein OR26 100.0 9.4E-33 3.2E-37 243.8 17.7 157 30-204 6-162 (169)
40 2etb_A Transient receptor pote 100.0 1.3E-33 4.5E-38 266.2 12.9 188 27-235 1-241 (256)
41 2pnn_A Transient receptor pote 100.0 1E-33 3.5E-38 269.7 10.5 203 20-234 5-252 (273)
42 1sw6_A Regulatory protein SWI6 100.0 3.6E-33 1.2E-37 273.3 14.5 198 6-226 109-327 (327)
43 2f8y_A Notch homolog 1, transl 100.0 4.8E-33 1.7E-37 256.4 13.1 200 39-278 2-202 (223)
44 3hra_A Ankyrin repeat family p 100.0 1.3E-31 4.3E-36 242.8 19.7 183 2-201 14-201 (201)
45 3jxi_A Vanilloid receptor-rela 100.0 4.1E-32 1.4E-36 256.5 12.6 194 25-234 2-244 (260)
46 4g8k_A 2-5A-dependent ribonucl 100.0 4.2E-31 1.4E-35 259.4 19.8 196 19-234 116-320 (337)
47 2rfa_A Transient receptor pote 100.0 5.2E-31 1.8E-35 244.4 19.0 187 3-203 13-222 (232)
48 1ikn_D Protein (I-kappa-B-alph 100.0 3E-32 1E-36 253.7 9.4 204 4-226 19-230 (236)
49 4gpm_A Engineered protein OR26 100.0 4.3E-31 1.5E-35 233.1 14.9 153 68-237 6-158 (169)
50 1sw6_A Regulatory protein SWI6 100.0 3E-32 1E-36 266.8 8.1 231 2-276 56-325 (327)
51 3v30_A DNA-binding protein rfx 100.0 1.2E-30 4E-35 230.7 16.8 170 28-218 2-171 (172)
52 3kea_A K1L; tropism, ANK repea 100.0 6.4E-31 2.2E-35 252.3 15.5 200 3-237 41-243 (285)
53 2rfm_A Putative ankyrin repeat 100.0 1.5E-30 5E-35 234.4 16.3 163 21-201 28-190 (192)
54 4hbd_A KN motif and ankyrin re 100.0 3.4E-31 1.2E-35 253.0 12.5 191 25-234 73-269 (276)
55 2vge_A RELA-associated inhibit 100.0 2.5E-32 8.4E-37 253.6 4.2 201 10-233 2-206 (229)
56 2rfm_A Putative ankyrin repeat 100.0 3.6E-30 1.2E-34 231.9 14.7 161 57-234 26-186 (192)
57 1ihb_A P18-INK4C(INK6), cyclin 100.0 4.6E-30 1.6E-34 224.4 14.8 160 26-203 3-162 (162)
58 3v31_A Ankyrin repeat family A 100.0 9.8E-30 3.3E-34 223.6 16.2 159 27-203 2-160 (167)
59 2etb_A Transient receptor pote 100.0 3.6E-30 1.2E-34 242.6 13.7 182 3-203 12-246 (256)
60 4hbd_A KN motif and ankyrin re 100.0 2E-30 6.7E-35 247.7 11.7 183 3-201 86-273 (276)
61 2pnn_A Transient receptor pote 100.0 2.4E-30 8.4E-35 246.3 11.4 201 3-220 23-272 (273)
62 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.7E-29 9.2E-34 221.5 16.7 161 23-201 9-169 (169)
63 3v30_A DNA-binding protein rfx 100.0 6.8E-30 2.3E-34 225.8 12.6 153 66-234 2-154 (172)
64 3jxi_A Vanilloid receptor-rela 100.0 1E-29 3.5E-34 239.9 11.4 189 3-203 15-250 (260)
65 3f6q_A Integrin-linked protein 100.0 3.7E-29 1.3E-33 222.7 13.9 169 26-215 3-171 (179)
66 3v31_A Ankyrin repeat family A 100.0 2.9E-29 9.9E-34 220.6 12.4 153 65-234 2-154 (167)
67 3twr_A Tankyrase-2; ankyrin re 100.0 5.1E-29 1.7E-33 218.6 12.9 155 63-234 5-159 (165)
68 3twr_A Tankyrase-2; ankyrin re 100.0 3.6E-29 1.2E-33 219.5 11.8 161 24-202 4-164 (165)
69 1ycs_B 53BP2, P53BP2; ankyrin 100.0 2.3E-29 7.7E-34 235.1 10.1 184 25-227 2-193 (239)
70 1awc_B Protein (GA binding pro 100.0 2E-28 6.8E-33 212.2 15.2 151 28-197 2-152 (153)
71 1bd8_A P19INK4D CDK4/6 inhibit 100.0 2E-28 6.8E-33 212.6 14.6 154 28-200 2-155 (156)
72 3f6q_A Integrin-linked protein 100.0 2.3E-28 7.9E-33 217.5 14.3 155 64-234 3-157 (179)
73 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.8E-28 9.6E-33 215.0 14.2 157 61-234 9-165 (169)
74 1awc_B Protein (GA binding pro 100.0 2.5E-28 8.5E-33 211.6 13.2 151 66-234 2-152 (153)
75 1bd8_A P19INK4D CDK4/6 inhibit 100.0 3.9E-28 1.3E-32 210.8 12.7 151 66-234 2-152 (156)
76 2vge_A RELA-associated inhibit 100.0 3.9E-29 1.3E-33 231.9 6.6 193 44-277 1-198 (229)
77 1ihb_A P18-INK4C(INK6), cyclin 99.9 5.5E-28 1.9E-32 211.1 11.2 153 65-234 4-156 (162)
78 1ycs_B 53BP2, P53BP2; ankyrin 99.9 5.3E-27 1.8E-31 218.9 9.8 156 63-236 2-160 (239)
79 3t8k_A Uncharacterized protein 99.9 5.6E-27 1.9E-31 210.1 9.4 158 28-203 6-179 (186)
80 1bi7_B P16INK4A, MTS1, multipl 99.9 2.4E-26 8.3E-31 199.8 9.1 145 60-222 6-151 (156)
81 1d9s_A Cyclin-dependent kinase 99.9 4.4E-26 1.5E-30 193.4 10.1 132 58-203 4-136 (136)
82 1bi7_B P16INK4A, MTS1, multipl 99.9 1.2E-25 4.1E-30 195.4 9.3 146 21-185 5-151 (156)
83 1d9s_A Cyclin-dependent kinase 99.9 3.2E-25 1.1E-29 188.0 11.1 130 18-165 2-132 (136)
84 2aja_A Ankyrin repeat family p 99.9 7.6E-27 2.6E-31 231.7 0.4 179 23-231 87-270 (376)
85 3t8k_A Uncharacterized protein 99.9 1E-25 3.5E-30 201.9 6.2 150 66-234 6-173 (186)
86 1n0r_A 4ANK, 4 ankyrin repeats 99.9 9.1E-24 3.1E-28 175.6 14.0 126 65-203 1-126 (126)
87 2jab_A H10-2-G3; HER2, darpin, 99.9 5.3E-24 1.8E-28 180.5 12.1 126 63-201 11-136 (136)
88 3c5r_A BARD-1, BRCA1-associate 99.9 5E-24 1.7E-28 180.8 11.4 124 96-234 5-128 (137)
89 2jab_A H10-2-G3; HER2, darpin, 99.9 1.5E-23 5.2E-28 177.6 12.0 126 23-165 9-134 (136)
90 3ui2_A Signal recognition part 99.9 7.7E-24 2.6E-28 198.2 10.4 144 24-203 41-185 (244)
91 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4.4E-23 1.5E-27 171.4 13.6 125 27-169 1-125 (126)
92 3ui2_A Signal recognition part 99.9 5.6E-25 1.9E-29 205.9 -0.1 167 26-235 13-180 (244)
93 3deo_A Signal recognition part 99.9 1.8E-23 6.1E-28 186.7 9.4 141 24-200 40-181 (183)
94 3c5r_A BARD-1, BRCA1-associate 99.9 6.9E-24 2.4E-28 179.9 6.4 126 23-165 5-130 (137)
95 2aja_A Ankyrin repeat family p 99.9 1.1E-24 3.8E-29 216.1 0.8 177 28-237 65-247 (376)
96 2b0o_E UPLC1; arfgap, structur 99.9 1.7E-22 5.7E-27 195.0 15.0 140 66-228 151-299 (301)
97 3ehr_A Osteoclast-stimulating 99.9 2.5E-23 8.5E-28 191.5 7.9 131 61-203 68-198 (222)
98 3aaa_C Myotrophin, protein V-1 99.9 6.8E-23 2.3E-27 170.4 9.8 115 98-227 4-118 (123)
99 3deo_A Signal recognition part 99.9 3.4E-23 1.2E-27 184.9 7.5 165 35-234 7-178 (183)
100 3aaa_C Myotrophin, protein V-1 99.9 1.2E-22 4.2E-27 168.9 9.6 118 25-159 4-121 (123)
101 2b0o_E UPLC1; arfgap, structur 99.9 1.7E-22 5.7E-27 195.0 11.0 142 26-191 149-299 (301)
102 3ehr_A Osteoclast-stimulating 99.9 7.7E-23 2.6E-27 188.2 6.6 129 95-237 67-195 (222)
103 1dcq_A PYK2-associated protein 99.9 2.3E-21 7.7E-26 184.9 14.0 178 24-225 62-273 (278)
104 3jue_A Arfgap with coiled-coil 99.8 1.1E-20 3.9E-25 186.6 11.6 150 62-225 195-347 (368)
105 3jue_A Arfgap with coiled-coil 99.8 2.5E-20 8.6E-25 184.1 12.2 148 25-189 196-348 (368)
106 3lvq_E ARF-GAP with SH3 domain 99.8 4.1E-20 1.4E-24 190.8 13.9 136 66-224 132-276 (497)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.8 6.1E-20 2.1E-24 144.6 10.7 91 27-124 1-91 (93)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.8 6.9E-20 2.4E-24 144.2 10.5 93 100-203 1-93 (93)
109 2l6b_A NR1C; ankyrin, consensu 99.8 3.8E-20 1.3E-24 151.7 9.0 109 96-219 4-112 (115)
110 3lvq_E ARF-GAP with SH3 domain 99.8 7.6E-20 2.6E-24 188.8 13.5 138 26-187 130-276 (497)
111 2l6b_A NR1C; ankyrin, consensu 99.8 4.9E-20 1.7E-24 151.0 8.2 109 23-145 4-112 (115)
112 1dcq_A PYK2-associated protein 99.8 1.8E-19 6.2E-24 171.7 12.5 126 29-166 131-260 (278)
113 2zgd_A 3 repeat synthetic anky 99.7 1E-17 3.5E-22 136.1 8.9 94 20-120 16-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 6.6E-17 2.3E-21 131.3 8.8 92 95-197 18-109 (110)
115 3zrh_A Ubiquitin thioesterase 35.3 36 0.0012 32.8 4.4 16 2-17 31-46 (454)
116 3zrh_A Ubiquitin thioesterase 20.3 1.5E+02 0.0051 28.6 5.7 53 148-200 26-91 (454)
No 1
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=5e-39 Score=306.89 Aligned_cols=229 Identities=18% Similarity=0.135 Sum_probs=187.7
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCC
Q 037168 21 LYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNN 100 (466)
Q Consensus 21 ~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~ 100 (466)
++..|.+|+||||+||+.|+.++|++|++.+++. ..++.+|..|+||||+|+..|+. +++++|+++ +++++.+|..
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~-ga~~~~~~~~ 77 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGH--EYLDLQNDLGQTALHLAAILGEA-STVEKLYAA-GAGVLVAERG 77 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTS--GGGGCCCTTSCCHHHHHHHHTCH-HHHHHHHHT-TCCSSCCCTT
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc--ccccccCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCCCCCC
Confidence 4668999999999999999999999999954331 23888999999999999999996 999999998 7889999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhccCCCC----------------------------------------CCCcccccccCC
Q 037168 101 GETALLRAARYGKVDIFNFLAGKISGYD----------------------------------------HATRLPFLHRND 140 (466)
Q Consensus 101 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~----------------------------------------~~~~~~~~~d~~ 140 (466)
|+||||+|+..|+.+++++|++.+.... ..+.+++.+|..
T Consensus 78 g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (282)
T 1oy3_D 78 GHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYD 157 (282)
T ss_dssp SCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTT
T ss_pred CCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCC
Confidence 9999999999999999999998754211 012346778899
Q ss_pred CCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccC-CChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCch
Q 037168 141 KTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDE-GRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIF 219 (466)
Q Consensus 141 g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~-G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpL 219 (466)
|.|||| .|+..|+.++++.|++ .+.+++.++.. |+||||+|+.+|+.+++++|+++|++ ++.+|..|+|||
T Consensus 158 g~t~L~---~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad----~~~~d~~g~tpL 229 (282)
T 1oy3_D 158 GHTPLH---VAVIHKDAEMVRLLRD-AGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD----PTARMYGGRTPL 229 (282)
T ss_dssp SCCHHH---HHHHTTCHHHHHHHHH-HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHH
T ss_pred CcCHHH---HHHHcCCHHHHHHHHH-cCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC----CcccccCCCCHH
Confidence 999999 7778999999999998 78899999865 99999999999999999999999998 999999999999
Q ss_pred hhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHhHH
Q 037168 220 HMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNE 280 (466)
Q Consensus 220 HlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~~~ 280 (466)
|+|++.++.++++.| +..+.+++.+|.+|.||++.+.....+
T Consensus 230 ~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~g~tpl~~a~~~~~~ 271 (282)
T 1oy3_D 230 GSALLRPNPILARLL-------------------RAHGAPEPEDGGDKLSPCSSSGSDSDS 271 (282)
T ss_dssp HHHHTSSCHHHHHHH-------------------HHTTCCCCCCC----------------
T ss_pred HHHHHcCCcHHHHHH-------------------HHcCCCcCcCCCcccccccccCCcccc
Confidence 999999999998777 345666899999999999998876543
No 2
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.5e-38 Score=311.35 Aligned_cols=246 Identities=18% Similarity=0.186 Sum_probs=211.2
Q ss_pred ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168 3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV 82 (466)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~ 82 (466)
+|+.+.+..++.+. +.+++..|..|.||||+|+..|+.+++++|++ .+.+++.+|..|.||||+|+..|+. ++
T Consensus 34 ~g~~~~v~~ll~~~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~g~~-~i 106 (351)
T 3utm_A 34 SGNEEKLMALLTPL-NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQ-----HGADVHAKDKGGLVPLHNACSYGHY-EV 106 (351)
T ss_dssp HTCHHHHHHHCCTT-TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTCCCHHHHHHHTTCH-HH
T ss_pred cCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCccCCCCCcHHHHHHHCCCH-HH
Confidence 68889999988875 57788899999999999999999999999999 5567889999999999999999996 99
Q ss_pred HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCC---C----------------------------
Q 037168 83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHA---T---------------------------- 131 (466)
Q Consensus 83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~---~---------------------------- 131 (466)
+++|+++ +.+++.+|..|.||||+|+..|+.+++++|++++.+.+.. +
T Consensus 107 v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~ 185 (351)
T 3utm_A 107 TELLLKH-GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQA 185 (351)
T ss_dssp HHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHH
Confidence 9999998 7889999999999999999999999999999985532210 0
Q ss_pred ----------------cccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHH
Q 037168 132 ----------------RLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFE 195 (466)
Q Consensus 132 ----------------~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~ 195 (466)
......+..|.||||+|+.....+..++++.|++ .+.+++.+|..|+||||+|+.+|+.++++
T Consensus 186 ~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~ 264 (351)
T 3utm_A 186 AREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLR-KGANVNEKNKDFMTPLHVAAERAHNDVME 264 (351)
T ss_dssp HHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHH-cCCCcCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 0111245678899995554433477999999998 89999999999999999999999999999
Q ss_pred HHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHH
Q 037168 196 RVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFA 275 (466)
Q Consensus 196 ~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~ 275 (466)
+|+++|++ +|.+|..|+||||+|++.++.++++.| +..+.+.+.+|.+|+||++++.
T Consensus 265 ~Ll~~ga~----~n~~d~~g~t~L~~A~~~~~~~~v~~L-------------------l~~gad~~~~~~~g~tal~~a~ 321 (351)
T 3utm_A 265 VLHKHGAK----MNALDSLGQTALHRAALAGHLQTCRLL-------------------LSYGSDPSIISLQGFTAAQMGN 321 (351)
T ss_dssp HHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHSC
T ss_pred HHHHCCCC----CCCcCCCCCCHHHHHHHcCcHHHHHHH-------------------HHcCCCCCCcCCCCCChhhhhh
Confidence 99999998 999999999999999999999998777 2345567899999999999985
Q ss_pred HHhHH
Q 037168 276 IANNE 280 (466)
Q Consensus 276 ~~~~~ 280 (466)
+...+
T Consensus 322 ~~~~~ 326 (351)
T 3utm_A 322 EAVQQ 326 (351)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54433
No 3
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=7.5e-38 Score=291.47 Aligned_cols=221 Identities=16% Similarity=0.199 Sum_probs=201.4
Q ss_pred ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcC
Q 037168 19 HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRN 98 (466)
Q Consensus 19 ~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d 98 (466)
.+++..|.+|.||||+|+..|+.+++++|++ .+.+++..|..|.||||+|+..|+. +++++|++. +.+++.+|
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~ 74 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQ-----AGANIDTCSEDQRTPLMEAAENNHL-EAVKYLIKA-GALVDPKD 74 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHTT-TCCCCCCC
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHHHHHHH-----cCCCcCccCCCCCCHHHHHHHhCCH-HHHHHHHhC-CCCCCCCC
Confidence 3567889999999999999999999999999 5566888999999999999999996 999999988 77899999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCC
Q 037168 99 NNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEG 178 (466)
Q Consensus 99 ~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G 178 (466)
..|.||||+|+..|+.+++++|++.++ .+++.+|..|.|||| .|+..|+.++++.|++ .+.+++.+|..|
T Consensus 75 ~~g~t~L~~A~~~~~~~~~~~Ll~~~~------~~~~~~~~~g~t~L~---~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g 144 (237)
T 3b7b_A 75 AEGSTCLHLAAKKGHYEVVQYLLSNGQ------MDVNCQDDGGWTPMI---WATEYKHVDLVKLLLS-KGSDINIRDNEE 144 (237)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHTTTC------CCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTS
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCCC------CCcccCCCCCCCHHH---HHHHcCCHHHHHHHHH-CCCCCCccCCCC
Confidence 999999999999999999999999842 577888999999999 7778999999999999 899999999999
Q ss_pred ChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCccc
Q 037168 179 RNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPH 258 (466)
Q Consensus 179 ~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~ 258 (466)
+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|++.++.++++.| +..+.
T Consensus 145 ~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~L-------------------l~~ga 201 (237)
T 3b7b_A 145 NICLHWAAFSGCVDIAEILLAAKCD----LHAVNIHGDSPLHIAARENRYDCVVLF-------------------LSRDS 201 (237)
T ss_dssp CCHHHHHHHHCCHHHHHHHHTTTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHH-------------------HTTTC
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHhCCHhHHHHH-------------------HHcCC
Confidence 9999999999999999999999998 899999999999999999999988666 33455
Q ss_pred ccccccCCCCChHHHHHHHhH
Q 037168 259 FLNHRNNMGFIPEELFAIANN 279 (466)
Q Consensus 259 ~~~~~n~~g~Tp~~l~~~~~~ 279 (466)
+++.+|++|+||++++....+
T Consensus 202 d~~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 202 DVTLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp CTTCCCTTSCCHHHHSCTTCH
T ss_pred CCCccCCCCCCHHHHHHHHHH
Confidence 678999999999999977654
No 4
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.3e-38 Score=301.13 Aligned_cols=232 Identities=16% Similarity=0.116 Sum_probs=193.1
Q ss_pred CccchHHHHHHHHhCCC---------ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHH
Q 037168 2 IKQDEQKVIELCRKVPD---------HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHE 72 (466)
Q Consensus 2 ~~g~~~~v~~ll~~~~~---------~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~ 72 (466)
++|+.+++.+++...++ ...+..|.+|+||||+||..|+.++++.|++ .+.+++.+|.+|+||||+
T Consensus 24 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~ 98 (285)
T 3d9h_A 24 MDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLIS-----QGWAVNIITADHVSPLHE 98 (285)
T ss_dssp ------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHH-----TTCCSCEECTTCCCHHHH
T ss_pred hcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCcCCCCCCHHHH
Confidence 57888888887665422 3366789999999999999999999999999 456688999999999999
Q ss_pred HHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHh
Q 037168 73 TATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSL 152 (466)
Q Consensus 73 Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~ 152 (466)
|+..|+. +++++|++. +.+++.+|.+|+||||+|+..|+.+++++|++.+ .+++. +.+|.|||| .|+
T Consensus 99 A~~~g~~-~~v~~Ll~~-ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-------~~~~~-~~~g~t~L~---~A~ 165 (285)
T 3d9h_A 99 ACLGGHL-SCVKILLKH-GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHG-------ASVQP-ESDLASPIH---EAA 165 (285)
T ss_dssp HHHTTCH-HHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-------CCSSC-SCTTSCHHH---HHH
T ss_pred HHHCCcH-HHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCC-------CCCCC-CCCCCCHHH---HHH
Confidence 9999996 999999998 7889999999999999999999999999999983 44443 345999999 777
Q ss_pred hcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhh
Q 037168 153 HFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAE 232 (466)
Q Consensus 153 ~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~ 232 (466)
..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++ ++ +|..|+||||+|++.++.++++
T Consensus 166 ~~g~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~-~~~~g~t~L~~A~~~~~~~~v~ 239 (285)
T 3d9h_A 166 RRGHVECVNSLIA-YGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD----VN-QGKGQDSPLHAVVRTASEELAC 239 (285)
T ss_dssp HHTCHHHHHHHHH-TTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC----TT-CCBTTBCHHHHHHHTTCHHHHH
T ss_pred HcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC----CC-CCCCCCCHHHHHHHcCCHHHHH
Confidence 8899999999998 8899999999999999999999999999999999998 66 4899999999999999999886
Q ss_pred ccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHH
Q 037168 233 KMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAI 276 (466)
Q Consensus 233 ~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~ 276 (466)
.| +..+.+++.+|.+|+||++++.+
T Consensus 240 ~L-------------------l~~gad~~~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 240 LL-------------------MDFGADTQAKNAEGKRPVELVPP 264 (285)
T ss_dssp HH-------------------HHTTCCTTCCCTTSCCGGGGSCT
T ss_pred HH-------------------HHCCCCCCCcCCCCCCHHHHhcC
Confidence 66 22355678999999999999974
No 5
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.9e-38 Score=297.88 Aligned_cols=219 Identities=16% Similarity=0.181 Sum_probs=165.0
Q ss_pred cccccCCCCCcHHHHHHHcC-------------CHHHHHHHHHhCCCCchhhh-hccCCCCChHHHHHHHcCCcHHHHHH
Q 037168 20 ALYVFTIHDDTVLHMATYTK-------------KSDLVIKLLDELPDQSLDKM-TRQNKAGNTILHETATSNHALPVADK 85 (466)
Q Consensus 20 ~~~~~~~~g~T~Lh~A~~~g-------------~~~~v~~Ll~~~~~~~~~~~-~~~d~~G~TpLh~Aa~~g~~~~~v~~ 85 (466)
+++.+|.+|.||||+|+..| +.++++.|++.++ ++ +..|..|.||||+|+..|+. ++++.
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~-----~~~~~~d~~g~t~L~~A~~~g~~-~~v~~ 75 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGA-----SLHNQTDRTGETALHLAARYSRS-DAAKR 75 (253)
T ss_dssp -------------------------------------------------------CCCTTSCCHHHHHHHTTCH-HHHHH
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccC-----CcccccCCCCCcHHHHHHHcCCH-HHHHH
Confidence 46778999999999999987 8999999999543 34 44689999999999999996 99999
Q ss_pred HHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHH
Q 037168 86 VLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILS 165 (466)
Q Consensus 86 Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~ 165 (466)
|++. +.+++.+|..|+||||+|+..|+.+++++|++.+. .+++.+|.+|.|||| .|+..|+.++++.|++
T Consensus 76 Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~------~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~ 145 (253)
T 1yyh_A 76 LLEA-SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA------TDLDARMHDGTTPLI---LAARLAVEGMLEDLIN 145 (253)
T ss_dssp HHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTT------SCTTCCCTTCCCHHH---HHHHHTCSSHHHHHHH
T ss_pred HHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCccccCCCCCcHHH---HHHHcChHHHHHHHHH
Confidence 9998 77899999999999999999999999999999832 367888999999999 6678899999999998
Q ss_pred HCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHh
Q 037168 166 VYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDEL 245 (466)
Q Consensus 166 ~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~ 245 (466)
.+.+++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|..|+||||+|++.++.++++.|
T Consensus 146 -~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpL~~A~~~~~~~~v~~L----------- 209 (253)
T 1yyh_A 146 -SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN----KDMQNNREETPLFLAAREGSYETAKVL----------- 209 (253)
T ss_dssp -TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHH-----------
T ss_pred -cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHCCCHHHHHHH-----------
Confidence 8999999999999999999999999999999999998 899999999999999999999988766
Q ss_pred hHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168 246 LWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN 278 (466)
Q Consensus 246 ~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~ 278 (466)
+..+.+.+.+|..|+||++++.+..
T Consensus 210 --------l~~ga~~~~~d~~g~tpl~~A~~~g 234 (253)
T 1yyh_A 210 --------LDHFANRDITDHMDRLPRDIAQERM 234 (253)
T ss_dssp --------HHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred --------HHcCCCccccccCCCCHHHHHHHcC
Confidence 2334567889999999999998764
No 6
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=6.7e-38 Score=292.24 Aligned_cols=225 Identities=18% Similarity=0.134 Sum_probs=194.8
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCC
Q 037168 21 LYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNN 100 (466)
Q Consensus 21 ~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~ 100 (466)
.+..|.+|+||||+||+.|+.++++.|++...+ .+.+++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~ 78 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQ-GGRELDIYNNLRQTPLHLAVITTLP-SVVRLLVTA-GASPMALDRH 78 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTT
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHh-cCCCCCcccccCCCHHHHHHHcCCH-HHHHHHHHc-CCCccccCCC
Confidence 356799999999999999999999999973221 3457888999999999999999996 999999997 7789999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccc-cCCC
Q 037168 101 GETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHID-DEGR 179 (466)
Q Consensus 101 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d-~~G~ 179 (466)
|+||||+|+..|+.+++++|++.+... ..+++.+|..|.|||| .|+..|+.++++.|++ .+.+++..| ..|+
T Consensus 79 g~t~l~~A~~~~~~~~~~~Ll~~~~~~---~~~~~~~~~~g~t~L~---~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~g~ 151 (241)
T 1k1a_A 79 GQTAAHLACEHRSPTCLRALLDSAAPG---TLDLEARNYDGLTALH---VAVNTECQETVQLLLE-RGADIDAVDIKSGR 151 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCTT---SCCTTCCCTTSCCHHH---HHHHHTCHHHHHHHHH-TTCCTTCCCTTTCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCc---cccccccCcCCCcHHH---HHHHcCCHHHHHHHHH-cCCCcccccccCCC
Confidence 999999999999999999999984411 2367788899999999 6778899999999999 788999998 8899
Q ss_pred hHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccc
Q 037168 180 NILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHF 259 (466)
Q Consensus 180 t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~ 259 (466)
||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.| +..+.+
T Consensus 152 t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~L-------------------l~~ga~ 208 (241)
T 1k1a_A 152 SPLIHAVENNSLSMVQLLLQHGAN----VNAQMYSGSSALHSASGRGLLPLVRTL-------------------VRSGAD 208 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCC----TTCBCTTSCBHHHHHHHHTCHHHHHHH-------------------HHTTCC
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHH-------------------HhcCCC
Confidence 999999999999999999999998 899999999999999999999988666 234556
Q ss_pred cccccCCCCChHHHHHHHh
Q 037168 260 LNHRNNMGFIPEELFAIAN 278 (466)
Q Consensus 260 ~~~~n~~g~Tp~~l~~~~~ 278 (466)
++.+|.+|+||++++.+..
T Consensus 209 ~~~~~~~g~tpl~~A~~~~ 227 (241)
T 1k1a_A 209 SSLKNCHNDTPLMVARSRR 227 (241)
T ss_dssp TTCCCTTSCCTTTTCSSHH
T ss_pred CCCcCCCCCCHHHHHHhcC
Confidence 7889999999999987643
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.8e-37 Score=291.93 Aligned_cols=235 Identities=22% Similarity=0.151 Sum_probs=208.2
Q ss_pred ccchHHHHHHHHhCCCcccccc-CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHH
Q 037168 3 KQDEQKVIELCRKVPDHALYVF-TIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALP 81 (466)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~-~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~ 81 (466)
+|+.+.+..++.++ .+++.. +..|.||||+|+..|+.+++++|++ .+.+++.+|..|.||||+|+..|+. +
T Consensus 15 ~g~~~~v~~Ll~~g--~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~ 86 (285)
T 1wdy_A 15 NEDVDLVQQLLEGG--ANVNFQEEEGGWTPLHNAVQMSREDIVELLLR-----HGADPVLRKKNGATPFLLAAIAGSV-K 86 (285)
T ss_dssp TTCHHHHHHHHHTT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTCCCHHHHHHHHTCH-H
T ss_pred cCCHHHHHHHHHcC--CCcccccCCCCCcHHHHHHHcCCHHHHHHHHH-----cCCCCcccCCCCCCHHHHHHHcCCH-H
Confidence 57888888888776 445555 8889999999999999999999999 4566888999999999999999996 9
Q ss_pred HHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccc----------cCCCCChhhHHHHH
Q 037168 82 VADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLH----------RNDKTNVLHIAILS 151 (466)
Q Consensus 82 ~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~----------d~~g~TpLh~A~~a 151 (466)
++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.+. +++.+ +..|.|||| .|
T Consensus 87 ~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-------~~~~~~~~~~~~~~~~~~g~t~L~---~A 155 (285)
T 1wdy_A 87 LLKLFLSK-GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGA-------NVNLRRKTKEDQERLRKGGATALM---DA 155 (285)
T ss_dssp HHHHHHHT-TCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTC-------CTTCCCCCCHHHHHTTCCCCCHHH---HH
T ss_pred HHHHHHHc-CCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCC-------CcccccccHHHHHhhccCCCcHHH---HH
Confidence 99999998 77899999999999999999999999999999844 44444 788999999 77
Q ss_pred hhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCC----hhHHHHHHhcCcccccccccccCCCCCchhhhhccCc
Q 037168 152 LHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQ----LEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRK 227 (466)
Q Consensus 152 ~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~----~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~ 227 (466)
+..|+.++++.|++..+.+++.+|..|+||||+|+..++ .+++++|+++|++ ++.+|..|+||||+|++.++
T Consensus 156 ~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~ 231 (285)
T 1wdy_A 156 AEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD----VNVRGERGKTPLILAVEKKH 231 (285)
T ss_dssp HHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC----SSCCCTTSCCHHHHHHHTTC
T ss_pred HHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCC----CCCcCCCCCcHHHHHHHcCC
Confidence 788999999999996799999999999999999999999 8999999999998 89999999999999999999
Q ss_pred chhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168 228 DYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN 278 (466)
Q Consensus 228 ~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~ 278 (466)
.++++.|.. ..+.+++.+|.+|+||++++.+..
T Consensus 232 ~~~v~~Ll~------------------~~g~~~~~~~~~g~t~l~~A~~~~ 264 (285)
T 1wdy_A 232 LGLVQRLLE------------------QEHIEINDTDSDGKTALLLAVELK 264 (285)
T ss_dssp HHHHHHHHH------------------SSSCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHh------------------ccCCCccccCCCCCcHHHHHHHcC
Confidence 988866611 145567899999999999998754
No 8
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.1e-37 Score=292.35 Aligned_cols=197 Identities=15% Similarity=0.085 Sum_probs=127.8
Q ss_pred ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168 3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV 82 (466)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~ 82 (466)
.|+.+.+..++..+ .+++..|.+|.||||+|+..|+.++++.|++ .+++++.+|..|.||||+|+..|+. ++
T Consensus 13 ~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~ 84 (261)
T 2xai_A 13 HGHQLSLRNLISQG--WAVNIITADHVSPLHEACLGGHLSCVKILLK-----HGAQVNGVTADWHTPLFNACVSGSW-DC 84 (261)
T ss_dssp HTCHHHHHHHHHTT--CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHHTCH-HH
T ss_pred cCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHcCCH-HH
Confidence 35555555555543 5566666667777777777777777777776 3445666666777777777776664 67
Q ss_pred HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHH
Q 037168 83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKD 162 (466)
Q Consensus 83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~ 162 (466)
++.|++. +.+++. +.+|.||||+|+..|+.+++++|++. +.+++.+|.+|+|||| .|+..|+.++++.
T Consensus 85 v~~Ll~~-g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~ 152 (261)
T 2xai_A 85 VNLLLQH-GASVQP-ESDLASPIHEAARRGHVECVNSLIAY-------GGNIDHKISHLGTPLY---LACENQQRACVKK 152 (261)
T ss_dssp HHHHHHT-TCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCBTTTBCHHH---HHHHTTCHHHHHH
T ss_pred HHHHHHC-CCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHc-------CCCCCcCCCCCCCHHH---HHHHhCCHHHHHH
Confidence 7766666 344443 34466777777777777777777766 4556666666777777 5556667777777
Q ss_pred HHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhcc
Q 037168 163 ILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIK 225 (466)
Q Consensus 163 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~ 225 (466)
|++ .+.+++. |..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..
T Consensus 153 Ll~-~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad----~~~~d~~g~tpl~~A~~~ 209 (261)
T 2xai_A 153 LLE-SGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGAD----TQAKNAEGKRPVELVPPE 209 (261)
T ss_dssp HHH-HTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCGGGGSCTT
T ss_pred HHH-cCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCChhhhcccc
Confidence 766 4556663 66667777777777777777777776666 666677777777777643
No 9
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=8e-38 Score=297.75 Aligned_cols=220 Identities=18% Similarity=0.128 Sum_probs=159.1
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCc---hhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCC
Q 037168 23 VFTIHDDTVLHMATYTKKSDLVIKLLDELPDQS---LDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNN 99 (466)
Q Consensus 23 ~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~---~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~ 99 (466)
+.|.++.+|||.||+.|+.++|++||+.+.+.. ...++..|..|.||||.|+..++...+++.|++. |+++|.+|.
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~-Gadvn~~d~ 84 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPAS-GLGVNVTSQ 84 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------C-CCCTTCCCT
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHC-CCCCCCcCC
Confidence 457778899999999999999999998665421 2346677888999999999888765677777776 788999999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCC
Q 037168 100 NGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGR 179 (466)
Q Consensus 100 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~ 179 (466)
+|+||||+|+..|+.+++++|++. +++++.++.+|.||+| .++..++.++++.|++ .+.+++.+|..|+
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~-------~a~~~~~~~~g~t~l~---~a~~~~~~~~~~~Ll~-~g~~~n~~d~~g~ 153 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKH-------GANAGARNADQAVPLH---LACQQGHFQVVKCLLD-SNAKPNKKDLSGN 153 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHT-------TCCTTCCCTTCCCHHH---HHHHHTCHHHHHHHHH-TTCCSCCCCTTCC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhc-------CCCcCccCCCCCCccc---cccccChHHHHHHHHH-CCCCCCCCCCCCC
Confidence 999999999999999999999988 6678888889999999 6778899999999998 7889999999999
Q ss_pred hHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccc
Q 037168 180 NILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHF 259 (466)
Q Consensus 180 t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~ 259 (466)
||||+|+.+|+.+++++|+++|++ +|.+|..|+||||+|+..|+.+++++| +..+.+
T Consensus 154 TpL~~A~~~g~~~~v~~Ll~~gad----vn~~~~~g~t~Lh~A~~~g~~~~v~~L-------------------l~~Gad 210 (269)
T 4b93_B 154 TPLIYACSGGHHELVALLLQHGAS----INASNNKGNTALHEAVIEKHVFVVELL-------------------LLHGAS 210 (269)
T ss_dssp CHHHHHHHTTCGGGHHHHHHTTCC----TTCBCTTSCBHHHHHHHTTCHHHHHHH-------------------HHTTCC
T ss_pred CHHHHHHHCCCHHHHHHHHHCCCC----CCccccCCCcHHHHHHHcCCHHHHHHH-------------------HHCCCC
Confidence 999999999999999999999988 889999999999999999998888666 234556
Q ss_pred cccccCCCCChHHHHHHH
Q 037168 260 LNHRNNMGFIPEELFAIA 277 (466)
Q Consensus 260 ~~~~n~~g~Tp~~l~~~~ 277 (466)
++.+|++|+||+++|.+.
T Consensus 211 ~~~~d~~G~TpL~~A~~~ 228 (269)
T 4b93_B 211 VQVLNKRQRTAVDCAEQN 228 (269)
T ss_dssp SCCCCTTSCCSGGGSCTT
T ss_pred CCCcCCCCCCHHHHHHhC
Confidence 788999999999988643
No 10
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=9.8e-37 Score=282.77 Aligned_cols=210 Identities=20% Similarity=0.145 Sum_probs=194.2
Q ss_pred ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168 3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV 82 (466)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~ 82 (466)
.|+.+.+..++.+.+ ...+..|.+|.||||+|+..|+.+++++|++ .+.+++.+|..|+||||+|+..|+. ++
T Consensus 16 ~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~ 88 (231)
T 3aji_A 16 SGKLDELKERILADK-SLATRTDQDSRTALHWACSAGHTEIVEFLLQ-----LGVPVNDKDDAGWSPLHIAASAGXD-EI 88 (231)
T ss_dssp HTCHHHHHHHHHHCG-GGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH-----TTCCSCCCCTTSCCHHHHHHHHTCH-HH
T ss_pred hCCHHHHHHHHHhch-hhhhcCCCCCCCHHHHHHHcCcHHHHHHHHH-----hCCCCCCcCCCCCCHHHHHHHcCHH-HH
Confidence 688999999999874 4578889999999999999999999999999 4566888999999999999999996 99
Q ss_pred HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHH
Q 037168 83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKD 162 (466)
Q Consensus 83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~ 162 (466)
+++|+++ +.+++.+|..|.||||+|+..|+.+++++|++. +.+++.+|..|.|||| .|+..|+.++++.
T Consensus 89 v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~ 157 (231)
T 3aji_A 89 VKALLVK-GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEG-------GANPDAKDHYDATAMH---RAAAKGNLKMVHI 157 (231)
T ss_dssp HHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHHTCHHHHHH
T ss_pred HHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCCcCCCCCcHHH---HHHHcCCHHHHHH
Confidence 9999998 778999999999999999999999999999998 6678889999999999 6778899999999
Q ss_pred HHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccC
Q 037168 163 ILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKME 235 (466)
Q Consensus 163 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~ 235 (466)
|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|..|+||||+|+..++.++.++|.
T Consensus 158 Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~i~~lL~ 225 (231)
T 3aji_A 158 LLF-YKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGAS----IYIENKEEKTPLQVAKGGLGLILKRLAE 225 (231)
T ss_dssp HHH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----SCCCCTTSCCHHHHSCHHHHHHHHHHHH
T ss_pred HHh-cCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCC----CCCCCCCCCCHHHHHHhhHHHHHHHHHc
Confidence 998 8999999999999999999999999999999999998 8999999999999999988888876663
No 11
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.5e-36 Score=279.99 Aligned_cols=215 Identities=18% Similarity=0.115 Sum_probs=195.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChH
Q 037168 25 TIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETA 104 (466)
Q Consensus 25 ~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tp 104 (466)
+..++||||.|++.|+.+.++.|++.. +..++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..|+||
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~----~~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~-g~~~~~~~~~g~t~ 76 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILAD----KSLATRTDQDSRTALHWACSAGHT-EIVEFLLQL-GVPVNDKDDAGWSP 76 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHC----GGGGGCCCTTSCCHHHHHHHHTCH-HHHHHHHHT-TCCSCCCCTTSCCH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhc----hhhhhcCCCCCCCHHHHHHHcCcH-HHHHHHHHh-CCCCCCcCCCCCCH
Confidence 346889999999999999999999964 345788899999999999999996 999999998 77899999999999
Q ss_pred HHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHH
Q 037168 105 LLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHV 184 (466)
Q Consensus 105 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~ 184 (466)
||+|+..|+.+++++|++. +.+++.+|.+|.|||| .|+..|+.++++.|++ .+.+++.+|..|+||||+
T Consensus 77 L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~ 145 (231)
T 3aji_A 77 LHIAASAGXDEIVKALLVK-------GAHVNAVNQNGCTPLH---YAASKNRHEIAVMLLE-GGANPDAKDHYDATAMHR 145 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHH
T ss_pred HHHHHHcCHHHHHHHHHHc-------CCCCCCCCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCCCCcCCCCCcHHHH
Confidence 9999999999999999998 6678889999999999 7778999999999998 889999999999999999
Q ss_pred HHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCccccccccc
Q 037168 185 AIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRN 264 (466)
Q Consensus 185 A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n 264 (466)
|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.| +..+.+++.+|
T Consensus 146 A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~ 202 (231)
T 3aji_A 146 AAAKGNLKMVHILLFYKAS----TNIQDTEGNTPLHLACDEERVEEAKFL-------------------VTQGASIYIEN 202 (231)
T ss_dssp HHHHTCHHHHHHHHHTTCC----SCCCCTTSCCHHHHHHHTTCHHHHHHH-------------------HHTTCCSCCCC
T ss_pred HHHcCCHHHHHHHHhcCCC----ccccCCCCCCHHHHHHHCCCHHHHHHH-------------------HHCCCCCCCCC
Confidence 9999999999999999998 899999999999999999999888666 22355678999
Q ss_pred CCCCChHHHHHHHhH
Q 037168 265 NMGFIPEELFAIANN 279 (466)
Q Consensus 265 ~~g~Tp~~l~~~~~~ 279 (466)
.+|+||++++.+.+.
T Consensus 203 ~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 203 KEEKTPLQVAKGGLG 217 (231)
T ss_dssp TTSCCHHHHSCHHHH
T ss_pred CCCCCHHHHHHhhHH
Confidence 999999999876543
No 12
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=286.22 Aligned_cols=185 Identities=16% Similarity=0.138 Sum_probs=168.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHH
Q 037168 27 HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALL 106 (466)
Q Consensus 27 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh 106 (466)
+|+||||+||..|+.++++.|++ .+.+++.+|.+|.||||+|+..|+. ++++.|+++ +.+++.+|.+|+||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~ 74 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLIS-----QGWAVNIITADHVSPLHEACLGGHL-SCVKILLKH-GAQVNGVTADWHTPLF 74 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHH-----TTCCSSCCCTTCCCHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHHC-CCCCCCCCCCCCCHHH
Confidence 68999999999999999999999 4567889999999999999999996 999999998 7889999999999999
Q ss_pred HHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHH
Q 037168 107 RAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAI 186 (466)
Q Consensus 107 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~ 186 (466)
+|+..|+.+++++|++.+ .+++. +.+|.|||| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+
T Consensus 75 ~A~~~~~~~~v~~Ll~~g-------~~~~~-~~~g~t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~ 142 (261)
T 2xai_A 75 NACVSGSWDCVNLLLQHG-------ASVQP-ESDLASPIH---EAARRGHVECVNSLIA-YGGNIDHKISHLGTPLYLAC 142 (261)
T ss_dssp HHHHHTCHHHHHHHHHTT-------CCSSC-SCTTCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCBTTTBCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCC-------CCCCC-CCCCCCHHH---HHHHcCcHHHHHHHHH-cCCCCCcCCCCCCCHHHHHH
Confidence 999999999999999984 44443 456999999 7778999999999999 89999999999999999999
Q ss_pred HcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccC
Q 037168 187 KYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKME 235 (466)
Q Consensus 187 ~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~ 235 (466)
.+|+.+++++|+++|++ +|. |..|+||||+|++.++.++++.|.
T Consensus 143 ~~~~~~~v~~Ll~~g~~----~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll 186 (261)
T 2xai_A 143 ENQQRACVKKLLESGAD----VNQ-GKGQDSPLHAVARTASEELACLLM 186 (261)
T ss_dssp HTTCHHHHHHHHHHTCC----TTC-CBTTBCHHHHHHHHTCHHHHHHHH
T ss_pred HhCCHHHHHHHHHcCCC----CCC-CCCCCChHHHHHHcCCHHHHHHHH
Confidence 99999999999999998 664 899999999999999999988773
No 13
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=3.1e-37 Score=297.57 Aligned_cols=238 Identities=18% Similarity=0.185 Sum_probs=205.6
Q ss_pred ccchHHHHHHHHhCCCcc-------ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHH
Q 037168 3 KQDEQKVIELCRKVPDHA-------LYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETAT 75 (466)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~-------~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~ 75 (466)
+|..+.+..++.+..... ....+.+|.||||.||..|+.++|+.|++. +.+++..|..|.||||+|+.
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~ 82 (299)
T 1s70_B 8 QKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLER-----GADINYANVDGLTALHQACI 82 (299)
T ss_dssp HHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHH-----CCCTTCBCTTCCBHHHHHHH
T ss_pred HHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHc-----CCCCcccCCCCCCHHHHHHH
Confidence 356678888888764322 223355688999999999999999999994 45688899999999999999
Q ss_pred cCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcC
Q 037168 76 SNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFG 155 (466)
Q Consensus 76 ~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g 155 (466)
.|+. +++++|++. +.+++.+|..|+||||+|+..|+.+++++|+++ +.+++.+|.+|.|||| .|+..+
T Consensus 83 ~g~~-~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-------g~~~~~~~~~g~t~l~---~A~~~~ 150 (299)
T 1s70_B 83 DDNV-DMVKFLVEN-GANINQPDNEGWIPLHAAASCGYLDIAEYLISQ-------GAHVGAVNSEGDTPLD---IAEEEA 150 (299)
T ss_dssp TTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HCCSHH
T ss_pred cCCH-HHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC-------CCCCCCcCCCCCCHHH---HHHhcc
Confidence 9996 999999997 788999999999999999999999999999998 6788889999999999 777889
Q ss_pred cHHHHHHHHHHCCCcccc--------------------------cccCCChHHHHHHHcCChhHHHHHHhcCcccccccc
Q 037168 156 CIEIVKDILSVYPQAVEH--------------------------IDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVR 209 (466)
Q Consensus 156 ~~~~v~~Ll~~~~~~~~~--------------------------~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~ 209 (466)
+.++++.++...+.+++. .|..|+||||+|+.+|+.+++++|+++|++ +|
T Consensus 151 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d----~~ 226 (299)
T 1s70_B 151 MEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD----VN 226 (299)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC----TT
T ss_pred hHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC----CC
Confidence 999999888766665543 567899999999999999999999999998 99
Q ss_pred cccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHhHH
Q 037168 210 KIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIANNE 280 (466)
Q Consensus 210 ~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~~~ 280 (466)
.+|.+|+||||+|+..++.++++.| +..+.+++.+|.+|+||++++.+...+
T Consensus 227 ~~d~~g~tpL~~A~~~~~~~~v~~L-------------------l~~gad~~~~d~~g~t~l~~A~~~~~~ 278 (299)
T 1s70_B 227 IKDYDGWTPLHAAAHWGKEEACRIL-------------------VENLCDMEAVNKVGQTAFDVADEDILG 278 (299)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCTTTSCCSGGGH
T ss_pred CcCCCCCcHHHHHHhcCCHHHHHHH-------------------HHcCCCCCCcCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999988766 233556789999999999999765433
No 14
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.7e-36 Score=280.44 Aligned_cols=213 Identities=18% Similarity=0.129 Sum_probs=181.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCC-CcccC-cCCCCChHH
Q 037168 28 DDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAP-GLLGM-RNNNGETAL 105 (466)
Q Consensus 28 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~-~~~~~-~d~~G~tpL 105 (466)
|+||||.||+.|+.++++.|++.++ ...+.+|..|.||||+|+..|+. +++++|++.+. .+++. +|..|+|||
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~----~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~~~~~~~~~~~~~~g~t~L 76 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKP----SLLLQKDQDGRIPLHWSVSFQAH-EITSFLLSKMENVNLDDYPDDSGWTPF 76 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCG----GGTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTCTTCCGGGCCCTTSCCHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCc----cccccCCCCCCCHHHHHHHcCCH-HHHHHHHhccccccccccCCCCCCCHH
Confidence 7899999999999999999999643 23455889999999999999996 99999999841 44555 889999999
Q ss_pred HHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHH
Q 037168 106 LRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVA 185 (466)
Q Consensus 106 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A 185 (466)
|+|+..|+.+++++|++.+. +.+++.+|.+|.|||| .|+..|+.++++.|++ .+.+++.+|..|+||||+|
T Consensus 77 ~~A~~~~~~~~~~~Ll~~g~-----~~~~~~~~~~g~t~L~---~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A 147 (228)
T 2dzn_A 77 HIACSVGNLEVVKSLYDRPL-----KPDLNKITNQGVTCLH---LAVGKKWFEVSQFLIE-NGASVRIKDKFNQIPLHRA 147 (228)
T ss_dssp HHHHHHCCHHHHHHHHSSSS-----CCCTTCCCTTCCCHHH---HHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCC-----CcccccCCcCCCCHHH---HHHHcCCHhHHHHHHH-cCCCccccCCCCCCHHHHH
Confidence 99999999999999998842 2677788899999999 6778899999999998 7899999999999999999
Q ss_pred HHcCChhHHHHHHhcC-cccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCccccccccc
Q 037168 186 IKYRQLEIFERVVQME-IPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRN 264 (466)
Q Consensus 186 ~~~~~~~iv~~Ll~~g-~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n 264 (466)
+.+|+.+++++|++.| ++ ++.+|.+|+||||+|+..++.++++.|. ...+.+++.+|
T Consensus 148 ~~~~~~~~v~~Ll~~g~~~----~~~~d~~g~t~L~~A~~~~~~~~v~~Ll------------------~~~ga~~~~~~ 205 (228)
T 2dzn_A 148 ASVGSLKLIELLCGLGKSA----VNWQDKQGWTPLFHALAEGHGDAAVLLV------------------EKYGAEYDLVD 205 (228)
T ss_dssp HHTTCHHHHHHHHTTTCCC----SCCCCTTSCCHHHHHHHTTCHHHHHHHH------------------HHHCCCSCCBC
T ss_pred HHcCCHHHHHHHHhcCccc----ccCcCCCCCCHHHHHHHcCCHHHHHHHH------------------HhcCCCCCccC
Confidence 9999999999999998 77 8899999999999999999988886661 02355678899
Q ss_pred CCCCChHHHHHH
Q 037168 265 NMGFIPEELFAI 276 (466)
Q Consensus 265 ~~g~Tp~~l~~~ 276 (466)
.+|+||++++.+
T Consensus 206 ~~g~t~l~~A~~ 217 (228)
T 2dzn_A 206 NKGAKAEDVALN 217 (228)
T ss_dssp TTSCBGGGGCSS
T ss_pred CCCCcHHHHHHH
Confidence 999999999854
No 15
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.3e-36 Score=286.55 Aligned_cols=208 Identities=15% Similarity=0.128 Sum_probs=180.6
Q ss_pred chHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHH
Q 037168 5 DEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVAD 84 (466)
Q Consensus 5 ~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~ 84 (466)
+.+.+..++..+ ....+..|.+|.||||+|+..|+.++++.|++ .+.+++.+|..|.||||+|+..|+. ++++
T Consensus 35 ~~~~v~~Ll~~g-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~ 107 (253)
T 1yyh_A 35 APAVISDFIYQG-ASLHNQTDRTGETALHLAARYSRSDAAKRLLE-----ASADANIQDNMGRTPLHAAVSADAQ-GVFQ 107 (253)
T ss_dssp ------------------CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHHTCH-HHHH
T ss_pred ChHHHHHHHHcc-CCcccccCCCCCcHHHHHHHcCCHHHHHHHHH-----cCCCCCCCCCCCCCHHHHHHHcCCH-HHHH
Confidence 445555555554 33345668999999999999999999999999 5567889999999999999999996 9999
Q ss_pred HHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHH
Q 037168 85 KVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDIL 164 (466)
Q Consensus 85 ~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll 164 (466)
+|++.++.+++.+|..|.||||+|+..|+.+++++|++. +.+++.+|.+|+|||| .|+..|+.++++.|+
T Consensus 108 ~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~d~~g~t~L~---~A~~~~~~~~v~~Ll 177 (253)
T 1yyh_A 108 ILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS-------HADVNAVDDLGKSALH---WAAAVNNVDAAVVLL 177 (253)
T ss_dssp HHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHT-------TCCTTCBCTTSCBHHH---HHHHHTCHHHHHHHH
T ss_pred HHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHc-------CCCCCCcCCCCCCHHH---HHHHcCCHHHHHHHH
Confidence 999997778999999999999999999999999999998 6788899999999999 677889999999999
Q ss_pred HHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168 165 SVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM 234 (466)
Q Consensus 165 ~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l 234 (466)
+ .+++++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|..|+||||+|++.|+.++++++
T Consensus 178 ~-~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~----~~~~d~~g~tpl~~A~~~g~~~i~~~l 242 (253)
T 1yyh_A 178 K-NGANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN----RDITDHMDRLPRDIAQERMHHDIVRLL 242 (253)
T ss_dssp H-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred H-cCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC----ccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 8 8999999999999999999999999999999999998 899999999999999999999998666
No 16
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.1e-36 Score=303.87 Aligned_cols=239 Identities=20% Similarity=0.158 Sum_probs=133.0
Q ss_pred cchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHH
Q 037168 4 QDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVA 83 (466)
Q Consensus 4 g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v 83 (466)
|+.+.+..++... ...+..+..|.||||+|+..|+.+++++|++. +.+++..|..|.||||+|+..|+. +++
T Consensus 124 g~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-----g~~~~~~~~~g~t~L~~A~~~~~~-~~v 195 (437)
T 1n11_A 124 GHVETVLALLEKE--ASQACMTKKGFTPLHVAAKYGKVRVAELLLER-----DAHPNAAGKNGLTPLHVAVHHNNL-DIV 195 (437)
T ss_dssp TCHHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCSSCCCHHHHHHHTTCH-HHH
T ss_pred CCHHHHHHHHhCC--CCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhC-----CCCCCCCCCCCCCHHHHHHHcCCH-HHH
Confidence 4445555444443 33444555566666666666666666666652 333444555555555555555553 555
Q ss_pred HHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCC--------------------------CCcccccc
Q 037168 84 DKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDH--------------------------ATRLPFLH 137 (466)
Q Consensus 84 ~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~--------------------------~~~~~~~~ 137 (466)
++|+++ +..++.++.+|.||||+|+..|+.+++++|++.+...+. .+.+++.+
T Consensus 196 ~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~ 274 (437)
T 1n11_A 196 KLLLPR-GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLG 274 (437)
T ss_dssp HHHGGG-TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC
T ss_pred HHHHhC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCC
Confidence 555544 333444444555555555555555555555544110000 03445555
Q ss_pred cCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCC
Q 037168 138 RNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNT 217 (466)
Q Consensus 138 d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~T 217 (466)
|..|.|||| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++ +|.+|..|+|
T Consensus 275 ~~~g~t~L~---~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad----~n~~~~~g~t 346 (437)
T 1n11_A 275 NKSGLTPLH---LVAQEGHVPVADVLIK-HGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQAD----VNAKTKLGYS 346 (437)
T ss_dssp CTTCCCHHH---HHHHHTCHHHHHHHHH-HTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCC----TTCCCTTSCC
T ss_pred CCCCCCHHH---HHHHcCCHHHHHHHHh-CCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCC----CCCCCCCCCC
Confidence 555666666 4445566666666665 4555666666666666666666666666666666655 5666666666
Q ss_pred chhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168 218 IFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN 278 (466)
Q Consensus 218 pLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~ 278 (466)
|||+|++.++.++++.| +..+.+.+.+|.+|+||++++.+..
T Consensus 347 ~L~~A~~~g~~~iv~~L-------------------l~~ga~~~~~~~~g~t~l~~A~~~g 388 (437)
T 1n11_A 347 PLHQAAQQGHTDIVTLL-------------------LKNGASPNEVSSDGTTPLAIAKRLG 388 (437)
T ss_dssp HHHHHHHTTCHHHHHHH-------------------HHTTCCSCCCCSSSCCHHHHHHHTT
T ss_pred HHHHHHHCChHHHHHHH-------------------HHCcCCCCCCCCCCCCHHHHHHHcC
Confidence 66666666666555444 2245567888899999999887654
No 17
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.5e-36 Score=278.49 Aligned_cols=193 Identities=17% Similarity=0.143 Sum_probs=180.8
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCC
Q 037168 21 LYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNN 100 (466)
Q Consensus 21 ~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~ 100 (466)
.+..|.+|.||||+|++.|+.+++++|++ .+.+++.+|..|.||||+|+..|+. +++++|++.++.+++.+|..
T Consensus 18 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~~~~~~~~~~~~ 91 (223)
T 2f8y_A 18 HNQTDRTGETALHLAARYSRSDAAKRLLE-----ASADANIQDNMGRTPLHAAVSADAQ-GVFQILIRNRATDLDARMHD 91 (223)
T ss_dssp TCCCTTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHBTTSCTTCCCTT
T ss_pred ccccCCCCCchHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHHcCCCCcccCCCC
Confidence 34558999999999999999999999999 4566888999999999999999996 99999999977789999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCCh
Q 037168 101 GETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRN 180 (466)
Q Consensus 101 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t 180 (466)
|.||||+|+..|+.+++++|++. +.+++.+|.+|+|||| .|+..|+.++++.|++ .+.+++.+|..|+|
T Consensus 92 g~t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t 160 (223)
T 2f8y_A 92 GTTPLILAARLAVEGMLEDLINS-------HADVNAVDDLGKSALH---WAAAVNNVDAAVVLLK-NGANKDMQNNREET 160 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHT-------TCCTTCBCTTSCBHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTCCC
T ss_pred CCcHHHHHHHhCcHHHHHHHHHc-------CCCCcCcCCCCCcHHH---HHHHcCCHHHHHHHHH-cCCCCCCcCCCCcC
Confidence 99999999999999999999998 6788889999999999 7778999999999999 79999999999999
Q ss_pred HHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168 181 ILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM 234 (466)
Q Consensus 181 ~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l 234 (466)
|||+|+.+|+.+++++|+++|++ ++.+|..|+||||+|++.++.++++.|
T Consensus 161 ~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~i~~~L 210 (223)
T 2f8y_A 161 PLFLAAREGSYETAKVLLDHFAN----RDITDHMDRLPRDIAQERMHHDIVRLL 210 (223)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC----CccccccCCCHHHHHHHhcchHHHHHH
Confidence 99999999999999999999998 899999999999999999999998776
No 18
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2e-35 Score=274.99 Aligned_cols=206 Identities=18% Similarity=0.237 Sum_probs=188.7
Q ss_pred ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168 3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV 82 (466)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~ 82 (466)
.|+.+.+..++..+ .+++..+.+|.||||+|+..|+.+++++|++ .+.+++.+|..|.||||+|+..|+. ++
T Consensus 21 ~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~ 92 (237)
T 3b7b_A 21 AGHVDICHMLVQAG--ANIDTCSEDQRTPLMEAAENNHLEAVKYLIK-----AGALVDPKDAEGSTCLHLAAKKGHY-EV 92 (237)
T ss_dssp HTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHT-----TTCCCCCCCTTSCCHHHHHHHTTCH-HH
T ss_pred cCcHHHHHHHHHcC--CCcCccCCCCCCHHHHHHHhCCHHHHHHHHh-----CCCCCCCCCCCCCcHHHHHHHcCCH-HH
Confidence 46777666666654 6788899999999999999999999999999 5566788999999999999999996 99
Q ss_pred HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHH
Q 037168 83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKD 162 (466)
Q Consensus 83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~ 162 (466)
+++|++.++.+++.+|..|.||||+|+..|+.+++++|++. +.+++.+|.+|.|||| .|+..|+.++++.
T Consensus 93 ~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~~~~ 162 (237)
T 3b7b_A 93 VQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK-------GSDINIRDNEENICLH---WAAFSGCVDIAEI 162 (237)
T ss_dssp HHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHHCCHHHHHH
T ss_pred HHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC-------CCCCCccCCCCCCHHH---HHHHCCCHHHHHH
Confidence 99999997788999999999999999999999999999998 6678889999999999 6778899999999
Q ss_pred HHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhh
Q 037168 163 ILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVA 231 (466)
Q Consensus 163 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~ 231 (466)
|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+..
T Consensus 163 Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad----~~~~d~~g~t~l~~A~~~~~~~~~ 226 (237)
T 3b7b_A 163 LLA-AKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSD----VTLKNKEGETPLQCASLNSQVWSA 226 (237)
T ss_dssp HHT-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC----TTCCCTTSCCHHHHSCTTCHHHHH
T ss_pred HHH-cCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCC----CCccCCCCCCHHHHHHHHHHHHHH
Confidence 998 8899999999999999999999999999999999998 899999999999999999876544
No 19
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.8e-35 Score=274.44 Aligned_cols=211 Identities=18% Similarity=0.114 Sum_probs=190.4
Q ss_pred ccchHHHHHHHHh--CCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcH
Q 037168 3 KQDEQKVIELCRK--VPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHAL 80 (466)
Q Consensus 3 ~g~~~~v~~ll~~--~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~ 80 (466)
.|+.+.+..++.. ..+.+++..|..|.||||+|+..|+.+++++|++ .+.+++.+|..|.||||+|+..|+.
T Consensus 19 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~l~~A~~~~~~- 92 (241)
T 1k1a_A 19 QGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT-----AGASPMALDRHGQTAAHLACEHRSP- 92 (241)
T ss_dssp TTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH-
T ss_pred cCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHH-----cCCCccccCCCCCCHHHHHHHcCCH-
Confidence 5777777777762 1246788899999999999999999999999999 5566888999999999999999996
Q ss_pred HHHHHHHHhCC---CcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCccccccc-CCCCChhhHHHHHhhcCc
Q 037168 81 PVADKVLRKAP---GLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR-NDKTNVLHIAILSLHFGC 156 (466)
Q Consensus 81 ~~v~~Ll~~~~---~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d-~~g~TpLh~A~~a~~~g~ 156 (466)
++++.|++..+ .+++.+|..|.||||+|+..|+.+++++|++. +.+++.++ ..|.|||| .|+..|+
T Consensus 93 ~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~~g~t~L~---~A~~~~~ 162 (241)
T 1k1a_A 93 TCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER-------GADIDAVDIKSGRSPLI---HAVENNS 162 (241)
T ss_dssp HHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTTCCCHHH---HHHHTTC
T ss_pred HHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHc-------CCCcccccccCCCcHHH---HHHHcCC
Confidence 99999999954 27889999999999999999999999999998 56777777 78999999 7778999
Q ss_pred HHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168 157 IEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM 234 (466)
Q Consensus 157 ~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l 234 (466)
.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|..|+||||+|+..++.++++.+
T Consensus 163 ~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~i~~~l 235 (241)
T 1k1a_A 163 LSMVQLLLQ-HGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD----SSLKNCHNDTPLMVARSRRVIDILRGK 235 (241)
T ss_dssp HHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCTTTTCSSHHHHHHHTC-
T ss_pred HHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCC----CCCcCCCCCCHHHHHHhcCcHHHHhhh
Confidence 999999999 7999999999999999999999999999999999998 899999999999999999999988766
No 20
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=7.7e-37 Score=284.83 Aligned_cols=225 Identities=17% Similarity=0.239 Sum_probs=188.3
Q ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCC
Q 037168 22 YVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNG 101 (466)
Q Consensus 22 ~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G 101 (466)
+.+|.+|+||||+|+..|+.++++.|++.++. .+.+++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..|
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g 78 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKG-DLAFLNFQNNLQQTPLHLAVITNQP-EIAEALLGA-GCDPELRDFRG 78 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC------CCCCCCCCTTCCCHHHHHHHTTCH-HHHHCCCSC-CCCSCCCCTTC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhc-cHHHhhccCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCCcCCCC
Confidence 35789999999999999999999999997654 3457899999999999999999996 999999987 78899999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCccccccc-CCCh
Q 037168 102 ETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDD-EGRN 180 (466)
Q Consensus 102 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~-~G~t 180 (466)
+||||+|+..|+.+++++|++.+..... ....+..|..|.|||| .|+..|+.++++.|++ .+.+++.+|. .|+|
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~g~t 153 (236)
T 1ikn_D 79 NTPLHLACEQGCLASVGVLTQSCTTPHL-HSILKATNYNGHTCLH---LASIHGYLGIVELLVS-LGADVNAQEPCNGRT 153 (236)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTTTSS-SCGGGCCCTTCCCHHH---HHHHTTCHHHHHHHHH-HTCCTTCCCTTTCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccchhH-HHHhhccCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCC
Confidence 9999999999999999999998542211 2335678889999999 7778999999999998 7899999998 9999
Q ss_pred HHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCccccc
Q 037168 181 ILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFL 260 (466)
Q Consensus 181 ~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~ 260 (466)
|||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..++.++++.|...+. ....
T Consensus 154 pL~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga-----------------~~~~ 212 (236)
T 1ikn_D 154 ALHLAVDLQNPDLVSLLLKCGAD----VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL-----------------ENLQ 212 (236)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCC----SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSC-----------------GGGS
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC----CCcccCCCCCHHHHHHccCchHHHHHHHHcch-----------------hhhh
Confidence 99999999999999999999998 99999999999999999999999877632211 1123
Q ss_pred ccccCCCCChHHHHH
Q 037168 261 NHRNNMGFIPEELFA 275 (466)
Q Consensus 261 ~~~n~~g~Tp~~l~~ 275 (466)
..+|.+|+||.+...
T Consensus 213 ~~~~~~~~~~~~~~~ 227 (236)
T 1ikn_D 213 MLPESEDEESYDTES 227 (236)
T ss_dssp SCCCCCTTTCCCCC-
T ss_pred cCCccchHHHHhhhc
Confidence 578889999987654
No 21
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=281.94 Aligned_cols=204 Identities=17% Similarity=0.134 Sum_probs=158.5
Q ss_pred CccchHHHHHHHHhCCC------ccccccCCCCCcHHHHHHHcCCH-HHHHHHHHhCCCCchhhhhccCCCCChHHHHHH
Q 037168 2 IKQDEQKVIELCRKVPD------HALYVFTIHDDTVLHMATYTKKS-DLVIKLLDELPDQSLDKMTRQNKAGNTILHETA 74 (466)
Q Consensus 2 ~~g~~~~v~~ll~~~~~------~~~~~~~~~g~T~Lh~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa 74 (466)
.+|+.+.|..+++.+.. ...+..+..|.||||.|+..++. .+++.|++ .|++++.+|.+|+||||+|+
T Consensus 20 ~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~-----~Gadvn~~d~~G~TpLh~A~ 94 (269)
T 4b93_B 20 ADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPA-----SGLGVNVTSQDGSSPLHVAA 94 (269)
T ss_dssp HTTCHHHHHHHHTCC---------------------------------------------CCCCTTCCCTTSCCHHHHHH
T ss_pred HcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHH-----CCCCCCCcCCCCCCHHHHHH
Confidence 36888888877765532 12566788899999999998876 47888998 56778999999999999999
Q ss_pred HcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhc
Q 037168 75 TSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHF 154 (466)
Q Consensus 75 ~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~ 154 (466)
..|+. +++++|++. +++++.++.+|.||+|+|+..++.+++++|++. +.+++.+|.+|+|||| .|+..
T Consensus 95 ~~g~~-~~v~~Ll~~-~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-------g~~~n~~d~~g~TpL~---~A~~~ 162 (269)
T 4b93_B 95 LHGRA-DLIPLLLKH-GANAGARNADQAVPLHLACQQGHFQVVKCLLDS-------NAKPNKKDLSGNTPLI---YACSG 162 (269)
T ss_dssp HTTCT-THHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-------TCCSCCCCTTCCCHHH---HHHHT
T ss_pred HcCcH-HHHHHHHhc-CCCcCccCCCCCCccccccccChHHHHHHHHHC-------CCCCCCCCCCCCCHHH---HHHHC
Confidence 99997 999999988 778999999999999999999999999999998 6788999999999999 77789
Q ss_pred CcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCc
Q 037168 155 GCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRK 227 (466)
Q Consensus 155 g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~ 227 (466)
|+.++++.|++ .++++|.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+++++
T Consensus 163 g~~~~v~~Ll~-~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad----~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 163 GHHELVALLLQ-HGASINASNNKGNTALHEAVIEKHVFVVELLLLHGAS----VQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp TCGGGHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC----SCCCCTTSCCSGGGSCTTCH
T ss_pred CCHHHHHHHHH-CCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCCCHHHHHHhCCc
Confidence 99999999998 8999999999999999999999999999999999999 99999999999999998664
No 22
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=9.4e-35 Score=268.69 Aligned_cols=207 Identities=17% Similarity=0.156 Sum_probs=185.4
Q ss_pred CccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhc-cCCCCChHHHHHHHcCCcH
Q 037168 2 IKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTR-QNKAGNTILHETATSNHAL 80 (466)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~d~~G~TpLh~Aa~~g~~~ 80 (466)
..|+.+.+..++.+++ ...+..|.+|.||||+|+..|+.+++++|++.+++ .+++. .|..|.||||+|+..|+.
T Consensus 11 ~~g~~~~v~~Ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~---~~~~~~~~~~g~t~L~~A~~~~~~- 85 (228)
T 2dzn_A 11 MENEFFKVQELLHSKP-SLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN---VNLDDYPDDSGWTPFHIACSVGNL- 85 (228)
T ss_dssp HTTCHHHHHHHHHHCG-GGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTT---CCGGGCCCTTSCCHHHHHHHHCCH-
T ss_pred HhCCHHHHHHHHhcCc-cccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccc---ccccccCCCCCCCHHHHHHHcCCH-
Confidence 3688888888888873 44556899999999999999999999999997643 34555 889999999999999996
Q ss_pred HHHHHHHHhC-CCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHH
Q 037168 81 PVADKVLRKA-PGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEI 159 (466)
Q Consensus 81 ~~v~~Ll~~~-~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~ 159 (466)
++++.|++++ +.+++.+|..|.||||+|+..|+.+++++|++. +.+++.+|.+|+|||| .|+..|+.++
T Consensus 86 ~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~ 155 (228)
T 2dzn_A 86 EVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN-------GASVRIKDKFNQIPLH---RAASVGSLKL 155 (228)
T ss_dssp HHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-------TCCSCCCCTTSCCHHH---HHHHTTCHHH
T ss_pred HHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHc-------CCCccccCCCCCCHHH---HHHHcCCHHH
Confidence 9999999984 377899999999999999999999999999998 6788899999999999 7778999999
Q ss_pred HHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHH-hcCcccccccccccCCCCCchhhhhccCc
Q 037168 160 VKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVV-QMEIPLRRLVRKIDYNGNTIFHMAGIKRK 227 (466)
Q Consensus 160 v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll-~~g~~~~~~~~~~d~~G~TpLHlAa~~~~ 227 (466)
++.|++..+.+++.+|..|+||||+|+.+|+.+++++|+ +.|++ ++.+|.+|+||||+|++.+.
T Consensus 156 v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~----~~~~~~~g~t~l~~A~~~~~ 220 (228)
T 2dzn_A 156 IELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE----YDLVDNKGAKAEDVALNEQV 220 (228)
T ss_dssp HHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC----SCCBCTTSCBGGGGCSSTTH
T ss_pred HHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC----CCccCCCCCcHHHHHHHHHH
Confidence 999999444999999999999999999999999999999 88998 99999999999999987543
No 23
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.4e-35 Score=294.58 Aligned_cols=231 Identities=18% Similarity=0.143 Sum_probs=192.8
Q ss_pred CCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCccc
Q 037168 16 VPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLG 95 (466)
Q Consensus 16 ~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~ 95 (466)
.++.+.+..|.+|.||||+||..|+.++|++|++ .+.+++.+|..|.||||+|+..|+. +++++|++.+ . +
T Consensus 8 ~~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~-----~g~~~~~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~g-~--~ 78 (364)
T 3ljn_A 8 FPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIE-----TGVSPTIQNRFGCTALHLACKFGCV-DTAKYLASVG-E--V 78 (364)
T ss_dssp --------CCHHHHHHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTCCCHHHHHHHHCCH-HHHHHHHHHC-C--C
T ss_pred ccCCCccccCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCccccCCCCCcHHHHHHHcCCH-HHHHHHHHCC-C--C
Confidence 3456677789999999999999999999999999 4567899999999999999999997 9999999994 4 3
Q ss_pred CcCCCCChHHHHHHHcCCHHHHHHHHhccC----CCC----------CCCcccccccCCCCChhhHHHHHhhcC--cHHH
Q 037168 96 MRNNNGETALLRAARYGKVDIFNFLAGKIS----GYD----------HATRLPFLHRNDKTNVLHIAILSLHFG--CIEI 159 (466)
Q Consensus 96 ~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~----~~~----------~~~~~~~~~d~~g~TpLh~A~~a~~~g--~~~~ 159 (466)
..+.+|.||||+|+..|+.+++++|++... ..+ ......+.+|.+|.|||| .|+..| +.++
T Consensus 79 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~---~A~~~g~~~~~~ 155 (364)
T 3ljn_A 79 HSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALH---WCVGLGPEYLEM 155 (364)
T ss_dssp CCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHH---HHHHSCGGGHHH
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHH---HHHHcCCchHHH
Confidence 445689999999999999999999999732 100 011233448889999999 777889 9999
Q ss_pred HHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcc-cccccccccCCCCCchhhhhccCcchhhhccCChh
Q 037168 160 VKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIP-LRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPA 238 (466)
Q Consensus 160 v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~-~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~ 238 (466)
++.|++ .+++++.+|..|+||||+|+.+|+.+++++|+++|++ ....+|.+|..|+||||+|+..++.++++.|
T Consensus 156 v~~Ll~-~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L---- 230 (364)
T 3ljn_A 156 IKILVQ-LGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRF---- 230 (364)
T ss_dssp HHHHHH-HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHH----
T ss_pred HHHHHH-cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHH----
Confidence 999999 6899999999999999999999999999999998876 2334789999999999999999999998777
Q ss_pred hhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168 239 LLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN 278 (466)
Q Consensus 239 ~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~ 278 (466)
+..+.+++.+|.+|.||++++.+..
T Consensus 231 ---------------l~~gad~~~~d~~g~tpL~~A~~~g 255 (364)
T 3ljn_A 231 ---------------VEMGIDVNMEDNEHTVPLYLSVRAA 255 (364)
T ss_dssp ---------------HTTTCCTTCCCTTSCCHHHHHHHTC
T ss_pred ---------------HHcCCCCCCCCCCCCCHHHHHHHhC
Confidence 3345667899999999999998764
No 24
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-34 Score=294.89 Aligned_cols=250 Identities=19% Similarity=0.203 Sum_probs=186.4
Q ss_pred ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168 3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV 82 (466)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~ 82 (466)
.|+.+.+..++..+ .+++..+..|.||||+|++.|+.++++.|++. +.+.+..+..|.||||+|+..|+. ++
T Consensus 90 ~g~~~~v~~Ll~~g--a~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-----~~~~~~~~~~g~t~L~~A~~~g~~-~~ 161 (437)
T 1n11_A 90 IGHTNMVKLLLENN--ANPNLATTAGHTPLHIAAREGHVETVLALLEK-----EASQACMTKKGFTPLHVAAKYGKV-RV 161 (437)
T ss_dssp HTCHHHHHHHHHHT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-----TCCSCCCCTTSCCHHHHHHHTTCH-HH
T ss_pred CCCHHHHHHHHhCC--CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC-----CCCCcCCCCCCCCHHHHHHHcCCH-HH
Confidence 46666666666664 77888999999999999999999999999994 455677899999999999999997 99
Q ss_pred HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHH
Q 037168 83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKD 162 (466)
Q Consensus 83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~ 162 (466)
+++|+++ +.+++..|..|.||||+|+..|+.+++++|++. +.+++.++.+|.|||| .|+..|+.++++.
T Consensus 162 v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~~~~ 230 (437)
T 1n11_A 162 AELLLER-DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR-------GGSPHSPAWNGYTPLH---IAAKQNQVEVARS 230 (437)
T ss_dssp HHHHHHT-TCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGG-------TCCSCCCCTTCCCHHH---HHHHTTCHHHHHH
T ss_pred HHHHHhC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC-------CCCCCCcCCCCCCHHH---HHHHcCCHHHHHH
Confidence 9999998 778999999999999999999999999999998 4455566667777777 5556677777777
Q ss_pred HHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhh
Q 037168 163 ILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQ 242 (466)
Q Consensus 163 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~ 242 (466)
|++ ++.+++..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|++.++.++++.|......+.
T Consensus 231 Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 305 (437)
T 1n11_A 231 LLQ-YGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN----GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVD 305 (437)
T ss_dssp HHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC----TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT
T ss_pred HHH-cCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCC
Confidence 776 6666676777777777777777777777777776666 66666666666666666666666655422111100
Q ss_pred -------------hH---hhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168 243 -------------DE---LLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN 278 (466)
Q Consensus 243 -------------~~---~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~ 278 (466)
.. ....+.+ +..+.+++.+|..|.||++++.+..
T Consensus 306 ~~~~~g~t~L~~A~~~g~~~~v~~L--l~~gad~n~~~~~g~t~L~~A~~~g 355 (437)
T 1n11_A 306 ATTRMGYTPLHVASHYGNIKLVKFL--LQHQADVNAKTKLGYSPLHQAAQQG 355 (437)
T ss_dssp CCCSSCCCHHHHHHHSSCSHHHHHH--HHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHcCcHHHHHHH--HhcCCCCCCCCCCCCCHHHHHHHCC
Confidence 00 0001111 1245677889999999999988654
No 25
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=6e-35 Score=280.36 Aligned_cols=205 Identities=13% Similarity=0.080 Sum_probs=186.1
Q ss_pred ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168 3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV 82 (466)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~ 82 (466)
..+.+++.++|.+. +++..|.+|.||||+|+..|+.++++.|++ .+.+++.+ +|+||||+|+..|+. ++
T Consensus 9 ~~~~~~v~~lL~~~---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~--~g~t~L~~A~~~g~~-~~ 77 (285)
T 3kea_A 9 TWKSKQLKSFLSSK---DTFKADVHGHSASYYAIADNNVRLVCTLLN-----AGALKNLL--ENEFPLHQAATLEDT-KI 77 (285)
T ss_dssp GCCHHHHHHHHHST---TTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTGGGSCC--TTCCHHHHHTTSSSC-HH
T ss_pred hcCHHHHHHHHHhC---CCCccCCCCCCHHHHHHHcCCHHHHHHHHh-----CCCCCCCC--CCCCHHHHHHHcCCH-HH
Confidence 56788999999876 478899999999999999999999999999 55667766 499999999999998 99
Q ss_pred HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCC-CChhhHHHHHhhcCcHHHHH
Q 037168 83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDK-TNVLHIAILSLHFGCIEIVK 161 (466)
Q Consensus 83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g-~TpLh~A~~a~~~g~~~~v~ 161 (466)
+++|+++ +.+++.+|..|+||||+|+..|+.+++++|++. +.+++.+|..| .|||| .|+..|+.++++
T Consensus 78 v~~Ll~~-ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga~~~~~~~~g~~t~L~---~A~~~~~~~~v~ 146 (285)
T 3kea_A 78 VKILLFS-GLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK-------NWRLMFYGKTGWKTSFY---HAVMLNDVSIVS 146 (285)
T ss_dssp HHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-------CGGGGGCSSSGGGSHHH---HHHHTTCHHHHH
T ss_pred HHHHHHC-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc-------CCCCCccCCCCCCCHHH---HHHHcCCHHHHH
Confidence 9999998 788999999999999999999999999999999 67899999999 89999 777899999999
Q ss_pred HHHHHCCCccccccc-CCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCc-hhhhhccCcchhhhccCC
Q 037168 162 DILSVYPQAVEHIDD-EGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTI-FHMAGIKRKDYVAEKMEG 236 (466)
Q Consensus 162 ~Ll~~~~~~~~~~d~-~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~Tp-LHlAa~~~~~~~~~~l~~ 236 (466)
.|++ .+.+. .|. .|+||||+|+.+|+.+++++|+++|++ ++.+|..|+|| ||+|+..++.++++.|..
T Consensus 147 ~Ll~-~g~~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad----~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~ 216 (285)
T 3kea_A 147 YFLS-EIPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTS----TNTNNSLLFIPDIKLAIDNKDIEMLQALFK 216 (285)
T ss_dssp HHHT-TSCTT--CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHH----TCTTCCCBCCTTHHHHHHHTCHHHHHHHTT
T ss_pred HHHh-CCCcc--ccccCCccHHHHHHHcChHHHHHHHHHcCCC----CCcccCCCCChHHHHHHHcCCHHHHHHHHH
Confidence 9999 45444 333 899999999999999999999999998 99999999998 999999999999988744
No 26
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-35 Score=295.32 Aligned_cols=226 Identities=15% Similarity=0.121 Sum_probs=193.6
Q ss_pred cccccC-CCCCcHHHHHHHcCCHHHHHHHHHhCCC---CchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCccc
Q 037168 20 ALYVFT-IHDDTVLHMATYTKKSDLVIKLLDELPD---QSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLG 95 (466)
Q Consensus 20 ~~~~~~-~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~---~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~ 95 (466)
.++..| ..|+||||+||..|+.++++.|+..... ..+++++.+|..|.||||+|+..|+. +++++|++. +++++
T Consensus 116 ~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~-~iv~~Ll~~-ga~~~ 193 (373)
T 2fo1_E 116 SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRR-RLVAYLMKA-GADPT 193 (373)
T ss_dssp TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHHT-TCCSC
T ss_pred cccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChH-HHHHHHHHC-CCCCc
Confidence 456667 7899999999999999888888731000 04677899999999999999999996 999999998 78899
Q ss_pred CcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcC---cHHHHHHHHHHCCCccc
Q 037168 96 MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFG---CIEIVKDILSVYPQAVE 172 (466)
Q Consensus 96 ~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g---~~~~v~~Ll~~~~~~~~ 172 (466)
.+|..|.||||+|+..|+.+++++|++.+. .+.+++.+|.+|.|||| .|+..+ +.++++.|++ .+.+++
T Consensus 194 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~----~~~~~~~~d~~g~t~L~---~A~~~~~~~~~~~v~~Ll~-~g~~~~ 265 (373)
T 2fo1_E 194 IYNKSERSALHQAAANRDFGMMVYMLNSTK----LKGDIEELDRNGMTALM---IVAHNEGRDQVASAKLLVE-KGAKVD 265 (373)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHTTSHH----HHHTTSCCCTTSCCHHH---HHHHSCSTTHHHHHHHHHH-HTCCSS
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHhcCc----cccChhhcCCCCCCHHH---HHHHhCCcchHHHHHHHHH-CCCCcc
Confidence 999999999999999999999999998731 01577888999999999 555666 9999999999 677776
Q ss_pred c--------cccCCChHHHHHHHcCChhHHHHHHhcC-cccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhh
Q 037168 173 H--------IDDEGRNILHVAIKYRQLEIFERVVQME-IPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQD 243 (466)
Q Consensus 173 ~--------~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g-~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~ 243 (466)
. .|..|+||||+|+.+|+.+++++|++++ ++ ++.+|.+|+||||+|+..|+.++++.|
T Consensus 266 ~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~----~n~~d~~g~TpL~~A~~~g~~~iv~~L--------- 332 (373)
T 2fo1_E 266 YDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN----KDKQDEDGKTPIMLAAQEGRIEVVMYL--------- 332 (373)
T ss_dssp CCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC----TTCCCTTCCCHHHHHHHHTCHHHHHHH---------
T ss_pred cccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC----ccCcCCCCCCHHHHHHHcCCHHHHHHH---------
Confidence 5 6779999999999999999999999876 77 899999999999999999999998776
Q ss_pred HhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168 244 ELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN 278 (466)
Q Consensus 244 ~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~ 278 (466)
+..+.+++.+|.+|+||++++.+..
T Consensus 333 ----------l~~gad~~~~d~~g~t~l~~A~~~g 357 (373)
T 2fo1_E 333 ----------IQQGASVEAVDATDHTARQLAQANN 357 (373)
T ss_dssp ----------HHTTCCSSCCCSSSCCHHHHHHHTT
T ss_pred ----------HHcCCCccCCCCCCCCHHHHHHHcC
Confidence 2345667899999999999998754
No 27
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.5e-34 Score=275.77 Aligned_cols=204 Identities=18% Similarity=0.095 Sum_probs=169.3
Q ss_pred ccchHHHHHHHHhCCCc-cccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHH
Q 037168 3 KQDEQKVIELCRKVPDH-ALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALP 81 (466)
Q Consensus 3 ~g~~~~v~~ll~~~~~~-~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~ 81 (466)
.|+.+.+..++..+.+. .++..|..|.||||+||..|+.+++++|++ ++++++.+|..|.||||+|+..|+. +
T Consensus 19 ~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~ga~~~~~~~~g~tpL~~A~~~~~~-~ 92 (282)
T 1oy3_D 19 HQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYA-----AGAGVLVAERGGHTALHLACRVRAH-T 92 (282)
T ss_dssp TTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH-----TTCCSSCCCTTSCCHHHHHTTTTCH-H
T ss_pred cCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCCCCCCCCHHHHHHHcCCc-c
Confidence 57777777777765332 278899999999999999999999999999 5567889999999999999999996 9
Q ss_pred HHHHHHHhCCC----------------------------------------------cccCcCCCCChHHHHHHHcCCHH
Q 037168 82 VADKVLRKAPG----------------------------------------------LLGMRNNNGETALLRAARYGKVD 115 (466)
Q Consensus 82 ~v~~Ll~~~~~----------------------------------------------~~~~~d~~G~tpLh~Aa~~g~~~ 115 (466)
++++|+++++. +++.+|..|.||||+|+..|+.+
T Consensus 93 ~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~ 172 (282)
T 1oy3_D 93 CACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAE 172 (282)
T ss_dssp HHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHH
T ss_pred hhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHH
Confidence 99999986422 36788999999999999999999
Q ss_pred HHHHHHhccCCCCCCCcccccccC-CCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHH
Q 037168 116 IFNFLAGKISGYDHATRLPFLHRN-DKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIF 194 (466)
Q Consensus 116 ~v~~Ll~~~~~~~~~~~~~~~~d~-~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv 194 (466)
++++|++. +.+++.++. .|+|||| .|+..|+.++++.|++ .+++++.+|..|+||||+|+.+|+.+++
T Consensus 173 ~v~~Ll~~-------g~~~~~~~~~~g~tpL~---~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~~v 241 (282)
T 1oy3_D 173 MVRLLRDA-------GADLNKPEPTCGRTPLH---LAVEAQAASVLELLLK-AGADPTARMYGGRTPLGSALLRPNPILA 241 (282)
T ss_dssp HHHHHHHH-------TCCTTCCCTTTCCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHTSSCHHHH
T ss_pred HHHHHHHc-------CCCCCCCCCCCCcCHHH---HHHHcCCHHHHHHHHH-cCCCCcccccCCCCHHHHHHHcCCcHHH
Confidence 99999998 667788875 4999999 7778999999999999 7999999999999999999999999999
Q ss_pred HHHHhcCcccccccccccCCCCCchhhhhccCc
Q 037168 195 ERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRK 227 (466)
Q Consensus 195 ~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~ 227 (466)
++|+++|++ ++.+|.+|.|||++|.....
T Consensus 242 ~~Ll~~ga~----~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 242 RLLRAHGAP----EPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HHHHHTTCC----CCCCC---------------
T ss_pred HHHHHcCCC----cCcCCCcccccccccCCccc
Confidence 999999999 99999999999999997653
No 28
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.4e-34 Score=266.89 Aligned_cols=199 Identities=19% Similarity=0.180 Sum_probs=169.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcc----cCcCCCCC
Q 037168 27 HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLL----GMRNNNGE 102 (466)
Q Consensus 27 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~----~~~d~~G~ 102 (466)
.|+||||.|++.|+.++++.|++. .+.+++.+|..|+||||+|+..|+. +++++|++.+.... +.+|.+|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~----~g~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~~~~~g~ 76 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKF----EGCEVHQRGAMGETALHIAALYDNL-EAAMVLMEAAPELVFEPMTSELYEGQ 76 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTT----TCSCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHHCGGGGGCCCCSTTTTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHh----cCCCcccCCCCCCCHHHHHHHcCCH-HHHHHHHHcCchhccccccccCCCCc
Confidence 589999999999999999999994 2567899999999999999999996 99999999844321 67788999
Q ss_pred hHHHHHHHcCCHHHHHHHHhccCCCCCCC------cccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCccccccc
Q 037168 103 TALLRAARYGKVDIFNFLAGKISGYDHAT------RLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDD 176 (466)
Q Consensus 103 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~------~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~ 176 (466)
||||+|+..|+.+++++|++.+.+.+... ...+..|.+|+|||| .|+..|+.++++.|++ .+++++.+|.
T Consensus 77 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~ga~~~~~d~ 152 (232)
T 2rfa_A 77 TALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLS---FAACVGSEEIVRLLIE-HGADIRAQDS 152 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHH---HHHHHTCHHHHHHHHH-TTCCTTCCCT
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHH---HHHHcCCHHHHHHHHH-CCCCCCCCCC
Confidence 99999999999999999999844222110 011223447999999 7778899999999998 7999999999
Q ss_pred CCChHHHHHHHcCChhHH----HHHHhcCcccc--cccccccCCCCCchhhhhccCcchhhhcc
Q 037168 177 EGRNILHVAIKYRQLEIF----ERVVQMEIPLR--RLVRKIDYNGNTIFHMAGIKRKDYVAEKM 234 (466)
Q Consensus 177 ~G~t~Lh~A~~~~~~~iv----~~Ll~~g~~~~--~~~~~~d~~G~TpLHlAa~~~~~~~~~~l 234 (466)
.|+||||+|+.+|+.+++ ++|+++|++.. .+.+.+|.+|+||||+|++.++.++++.|
T Consensus 153 ~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~L 216 (232)
T 2rfa_A 153 LGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHL 216 (232)
T ss_dssp TSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999999988 99999998721 12278999999999999999999998777
No 29
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.5e-34 Score=273.65 Aligned_cols=204 Identities=15% Similarity=0.093 Sum_probs=181.7
Q ss_pred ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168 3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV 82 (466)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~ 82 (466)
.|+.+.+..++..+ .+++..|.+|.||||+|+..|+.+++++|++ .+.+++.+|..|.||||+|+..|+. ++
T Consensus 69 ~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~ga~~~~~~~~g~t~L~~A~~~~~~-~~ 140 (285)
T 3d9h_A 69 HGHQLSLRNLISQG--WAVNIITADHVSPLHEACLGGHLSCVKILLK-----HGAQVNGVTADWHTPLFNACVSGSW-DC 140 (285)
T ss_dssp TTCHHHHHHHHHTT--CCSCEECTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCSSCCCTTCCCHHHHHHHHTCH-HH
T ss_pred cCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHCCcHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHcCHH-HH
Confidence 57777777777765 6788899999999999999999999999999 5567889999999999999999996 99
Q ss_pred HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHH
Q 037168 83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKD 162 (466)
Q Consensus 83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~ 162 (466)
+++|++. +.+++. +.+|.||||+|+..|+.+++++|++. +.+++.+|.+|+|||| .|+..|+.++++.
T Consensus 141 v~~Ll~~-g~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~~~~~~d~~g~t~L~---~A~~~~~~~~v~~ 208 (285)
T 3d9h_A 141 VNLLLQH-GASVQP-ESDLASPIHEAARRGHVECVNSLIAY-------GGNIDHKISHLGTPLY---LACENQQRACVKK 208 (285)
T ss_dssp HHHHHHT-TCCSSC-SCTTSCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCBTTTBCHHH---HHHHTTCHHHHHH
T ss_pred HHHHHHC-CCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHC-------CCCCCCcCCCCCCHHH---HHHHcCcHHHHHH
Confidence 9999998 555664 44599999999999999999999998 6788899999999999 7778999999999
Q ss_pred HHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168 163 ILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM 234 (466)
Q Consensus 163 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l 234 (466)
|++ .+.+++. |..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+.. .++++.|
T Consensus 209 Ll~-~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad----~~~~d~~g~t~l~~A~~~--~~~~~~L 272 (285)
T 3d9h_A 209 LLE-SGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGAD----TQAKNAEGKRPVELVPPE--SPLAQLF 272 (285)
T ss_dssp HHH-TTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCGGGGSCTT--SHHHHHH
T ss_pred HHH-CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCCCHHHHhcCc--cHHHHHH
Confidence 998 7888885 89999999999999999999999999998 999999999999999943 4555444
No 30
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.3e-34 Score=265.64 Aligned_cols=218 Identities=18% Similarity=0.153 Sum_probs=192.0
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCC
Q 037168 21 LYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNN 100 (466)
Q Consensus 21 ~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~ 100 (466)
++..|..|.||||.|++.|+.+++++|++ .+.+++.+|..|.||||+|+..|+. +++++|++.+.......+..
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~~~~~~~~~~~~ 75 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVE-----AGYDVRQPDKENVTLLHWAAINNRI-DLVKYYISKGAIVDQLGGDL 75 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTTCCTTCCBTTT
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHH-----cCCCcCCCCCCCCCHHHHHHHhCCH-HHHHHHHHcCCcchhhcCCc
Confidence 35578899999999999999999999999 4566888999999999999999997 99999999865544455667
Q ss_pred CChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCCh
Q 037168 101 GETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRN 180 (466)
Q Consensus 101 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t 180 (466)
|.||||+|+..|+.+++++|++. +.+++.+|..|.|||| .|+..|+.++++.|++ .+.+++.+|..|+|
T Consensus 76 ~~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~l~---~A~~~~~~~~~~~Ll~-~~~~~~~~~~~g~t 144 (240)
T 3eu9_A 76 NSTPLHWATRQGHLSMVVQLMKY-------GADPSLIDGEGCSCIH---LAAQFGHTSIVAYLIA-KGQDVDMMDQNGMT 144 (240)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCC
T ss_pred CCChhHHHHHcCCHHHHHHHHHc-------CCCCcccCCCCCCHHH---HHHHcCHHHHHHHHHh-cCCCccccCCCCCc
Confidence 99999999999999999999998 6678888999999999 7778899999999998 78899999999999
Q ss_pred HHHHHHHcCC-hhHHHHHHhcCcccccccccccC-CCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCccc
Q 037168 181 ILHVAIKYRQ-LEIFERVVQMEIPLRRLVRKIDY-NGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPH 258 (466)
Q Consensus 181 ~Lh~A~~~~~-~~iv~~Ll~~g~~~~~~~~~~d~-~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~ 258 (466)
|||+|+..++ .+++++|++.|++ ++..+. .|+||||+|+..++.++++.|. ..+.
T Consensus 145 ~l~~a~~~~~~~~~~~~L~~~~~~----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-------------------~~g~ 201 (240)
T 3eu9_A 145 PLMWAAYRTHSVDPTRLLLTFNVS----VNLGDKYHKNTALHWAVLAGNTTVISLLL-------------------EAGA 201 (240)
T ss_dssp HHHHHHHHCCSSTTHHHHHHTTCC----TTCCCTTTCCCHHHHHHHHTCHHHHHHHH-------------------HHTC
T ss_pred HHHHHHHhCChHHHHHHHHhcCCC----cchhhccCCCcHHHHHHHcCCHHHHHHHH-------------------HcCC
Confidence 9999997776 8999999999988 888887 9999999999999998886662 2345
Q ss_pred ccccccCCCCChHHHHHHHh
Q 037168 259 FLNHRNNMGFIPEELFAIAN 278 (466)
Q Consensus 259 ~~~~~n~~g~Tp~~l~~~~~ 278 (466)
+++.+|.+|+||++++.+..
T Consensus 202 ~~~~~~~~g~t~l~~A~~~~ 221 (240)
T 3eu9_A 202 NVDAQNIKGESALDLAKQRK 221 (240)
T ss_dssp CTTCBCTTSCBHHHHHHHTT
T ss_pred CCCCcCCCCCCHHHHHHHcC
Confidence 57889999999999998764
No 31
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=2e-33 Score=276.02 Aligned_cols=242 Identities=21% Similarity=0.133 Sum_probs=199.2
Q ss_pred ccchHHHHHHHHhCCCccccccCC-CCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHH
Q 037168 3 KQDEQKVIELCRKVPDHALYVFTI-HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALP 81 (466)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~-~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~ 81 (466)
+||.+.|..+|+.+ ++++..+. .|+||||+||+.|+.++|++||+ ++++++.+|..+.+|+|.++..+.. .
T Consensus 35 ~g~~~~V~~LL~~G--advn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~-----~ga~~~~~~~~~~~~~~~~~~~~~~-~ 106 (337)
T 4g8k_A 35 NEDVDLVQQLLEGG--ANVNFQEEEGGWTPLHNAVQMSREDIVELLLR-----HGADPVLRKKNGATPFILAAIAGSV-K 106 (337)
T ss_dssp TTCHHHHHHHHHHT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTCCCHHHHHHHHTCH-H
T ss_pred cCCHHHHHHHHHCC--CCCCccCCCCCcCHHHHHHHcCCHHHHHHHHH-----cCCchhhhccCCCchhHHHHhcccc-h
Confidence 57778787777765 66776654 58899999999999999999998 5566788888999999999988885 7
Q ss_pred HHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCC---CCcccccccCCCCChhhHHHHHhhcCcHH
Q 037168 82 VADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDH---ATRLPFLHRNDKTNVLHIAILSLHFGCIE 158 (466)
Q Consensus 82 ~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~---~~~~~~~~d~~g~TpLh~A~~a~~~g~~~ 158 (466)
+.+.+++. +.+++.+|..|.||||+|+..|+.+++++|++.+...+. ...+....+..|.|||| .|+..|+.+
T Consensus 107 ~~~~~~~~-~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~---~A~~~g~~~ 182 (337)
T 4g8k_A 107 LLKLFLSK-GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALM---DAAEKGHVE 182 (337)
T ss_dssp HHHHHHTT-TCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHH---HHHHHTCHH
T ss_pred hhHHhhhc-cchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHH---HHHHCCCHH
Confidence 77777766 677999999999999999999999999999998654321 12334456778999999 777899999
Q ss_pred HHHHHHHHCCCcccccccCCChHHHHHHHcCC----hhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168 159 IVKDILSVYPQAVEHIDDEGRNILHVAIKYRQ----LEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM 234 (466)
Q Consensus 159 ~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~----~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l 234 (466)
+++.|++..|++++.+|..|+|+||.++..++ .+++++|+++|++ +|.+|.+|+||||+|+..++.++++.|
T Consensus 183 ~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad----~n~~d~~g~t~L~~a~~~~~~~~v~~L 258 (337)
T 4g8k_A 183 VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD----VNVRGERGKTPLILAVEKKHLGLVQRL 258 (337)
T ss_dssp HHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC----TTCCCGGGCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC----CCCcCCCCCCHHHHHHHhhhhHHHHHH
Confidence 99999988899999999999999999887654 4588999999998 999999999999999999998887555
Q ss_pred CChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168 235 EGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN 278 (466)
Q Consensus 235 ~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~ 278 (466)
. ...+.+++.+|.+|+||+++|.+..
T Consensus 259 l------------------~~~~~~vn~~d~~G~TpL~~A~~~g 284 (337)
T 4g8k_A 259 L------------------EQEHIEINDTDSDGKTALLLAVELK 284 (337)
T ss_dssp H------------------TSTTCCTTCBCTTSCBHHHHHHHTT
T ss_pred H------------------HhcCCcccCcCCCCCCHHHHHHHcC
Confidence 1 1234567899999999999998654
No 32
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1e-33 Score=256.57 Aligned_cols=191 Identities=18% Similarity=0.214 Sum_probs=175.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChH
Q 037168 25 TIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETA 104 (466)
Q Consensus 25 ~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tp 104 (466)
+..+.||||.|+..|+.+.++.|++.+ +.+++..|..|.||||+|+..|+. +++++|++. +.+++.+|..|+||
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~----~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t~ 75 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDT----TYQVDEVDTEGNTPLNIAVHNNDI-EIAKALIDR-GADINLQNSISDSP 75 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCT----TCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCTTSCCH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcC----CCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCCCCCCCCCH
Confidence 457899999999999999999999953 336888999999999999999996 999999998 78899999999999
Q ss_pred HHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHH
Q 037168 105 LLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHV 184 (466)
Q Consensus 105 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~ 184 (466)
||+|+..|+.+++++|++.. +.+++.+|..|.|||| .|+..|+.++++.|++..+.+++.+|..|+||||+
T Consensus 76 l~~A~~~~~~~~~~~Ll~~~------~~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~ 146 (201)
T 3hra_A 76 YLYAGAQGRTEILAYMLKHA------TPDLNKHNRYGGNALI---PAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIE 146 (201)
T ss_dssp HHHHHHTTCHHHHHHHHHHS------CCCTTCCCTTSCCSHH---HHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcc------CcccccccCCCCcHHH---HHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHH
Confidence 99999999999999999653 4678889999999999 77789999999999997669999999999999999
Q ss_pred HHHcCC-----hhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168 185 AIKYRQ-----LEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM 234 (466)
Q Consensus 185 A~~~~~-----~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l 234 (466)
|+..++ .+++++|+++|++ ++.+|.+|+||||+|++.++.++++.|
T Consensus 147 A~~~~~~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~~~~~L 197 (201)
T 3hra_A 147 AVGLREGNQLYQDIVKLLMENGAD----QSIKDNSGRTAMDYANQKGYTEISKIL 197 (201)
T ss_dssp HHHSSCCSHHHHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHhccchhhHHHHHHHHHHCCCC----CCccCCCCCCHHHHHHHcCCHhHHHHH
Confidence 999998 9999999999998 899999999999999999999988666
No 33
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-33 Score=268.34 Aligned_cols=209 Identities=20% Similarity=0.202 Sum_probs=186.7
Q ss_pred ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168 3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV 82 (466)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~ 82 (466)
.|+.+.+..++..+ .+++..|.+|.||||+|+..|+.+++++|++ .+.+++.+|..|.||||+|+..|+. ++
T Consensus 49 ~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~ 120 (285)
T 1wdy_A 49 MSREDIVELLLRHG--ADPVLRKKNGATPFLLAAIAGSVKLLKLFLS-----KGADVNECDFYGFTAFMEAAVYGKV-KA 120 (285)
T ss_dssp TTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH-----TTCCTTCBCTTCCBHHHHHHHTTCH-HH
T ss_pred cCCHHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCccCcccCCHHHHHHHhCCH-HH
Confidence 45666666666554 6788899999999999999999999999999 4566888999999999999999996 99
Q ss_pred HHHHHHhCCCcccCc----------CCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHh
Q 037168 83 ADKVLRKAPGLLGMR----------NNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSL 152 (466)
Q Consensus 83 v~~Ll~~~~~~~~~~----------d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~ 152 (466)
+++|++. +.+++.+ +..|.||||+|+..|+.+++++|++.. +.+++.+|..|+|||| .|+
T Consensus 121 ~~~Ll~~-g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~------~~~~~~~~~~g~t~l~---~a~ 190 (285)
T 1wdy_A 121 LKFLYKR-GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEM------GADVNACDNMGRNALI---HAL 190 (285)
T ss_dssp HHHHHHT-TCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTS------CCCTTCCCTTSCCHHH---HHH
T ss_pred HHHHHHh-CCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhc------CCCCCccCCCCCCHHH---HHH
Confidence 9999998 5667766 788999999999999999999999862 4677888999999999 566
Q ss_pred hcCc----HHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHh-cCcccccccccccCCCCCchhhhhccCc
Q 037168 153 HFGC----IEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQ-MEIPLRRLVRKIDYNGNTIFHMAGIKRK 227 (466)
Q Consensus 153 ~~g~----~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~-~g~~~~~~~~~~d~~G~TpLHlAa~~~~ 227 (466)
..++ .++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|++ .|++ ++.+|.+|+||||+|++.++
T Consensus 191 ~~~~~~~~~~i~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~----~~~~~~~g~t~l~~A~~~~~ 265 (285)
T 1wdy_A 191 LSSDDSDVEAITHLLLD-HGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE----INDTDSDGKTALLLAVELKL 265 (285)
T ss_dssp HCSCTTTHHHHHHHHHH-TTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCC----TTCCCTTSCCHHHHHHHTTC
T ss_pred HccccchHHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCC----ccccCCCCCcHHHHHHHcCc
Confidence 7777 899999998 899999999999999999999999999999999 8888 89999999999999999999
Q ss_pred chhhhcc
Q 037168 228 DYVAEKM 234 (466)
Q Consensus 228 ~~~~~~l 234 (466)
.++++.|
T Consensus 266 ~~i~~~L 272 (285)
T 1wdy_A 266 KKIAELL 272 (285)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998777
No 34
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=8.7e-34 Score=282.80 Aligned_cols=204 Identities=19% Similarity=0.225 Sum_probs=182.5
Q ss_pred CccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCC--Cccc
Q 037168 18 DHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAP--GLLG 95 (466)
Q Consensus 18 ~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~--~~~~ 95 (466)
+.+++..|.+|.||||+|+..|+.++|++|++ .+++++.+|..|.||||+|+..|+. +++++|++... .+++
T Consensus 156 ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~-----~ga~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~~~~~~~~~ 229 (373)
T 2fo1_E 156 GADVNAMDCDENTPLMLAVLARRRRLVAYLMK-----AGADPTIYNKSERSALHQAAANRDF-GMMVYMLNSTKLKGDIE 229 (373)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-----TTCCSCCCCTTCCCHHHHHHHTTCH-HHHHHHTTSHHHHHTTS
T ss_pred CCCCcCCCCCCCCHHHHHHHcChHHHHHHHHH-----CCCCCcccCCCCCCHHHHHHHCCCH-HHHHHHHhcCccccChh
Confidence 47789999999999999999999999999999 5667889999999999999999996 99999998732 6789
Q ss_pred CcCCCCChHHHHHHHcC---CHHHHHHHHhccCCCCCCC-cccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcc
Q 037168 96 MRNNNGETALLRAARYG---KVDIFNFLAGKISGYDHAT-RLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAV 171 (466)
Q Consensus 96 ~~d~~G~tpLh~Aa~~g---~~~~v~~Ll~~~~~~~~~~-~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~ 171 (466)
..|..|.||||+|+..| +.+++++|++.+.+.+..+ ...+.+|..|+|||| .|+..|+.++++.|++..+.++
T Consensus 230 ~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh---~A~~~g~~~~v~~Ll~~~~~~~ 306 (373)
T 2fo1_E 230 ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALH---YAAQVSNMPIVKYLVGEKGSNK 306 (373)
T ss_dssp CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHH---HHHSSCCHHHHHHHHHHSCCCT
T ss_pred hcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHH---HHHHhCCHHHHHHHHHhcCCCc
Confidence 99999999999999998 8999999999954332111 112346779999999 7779999999999999778999
Q ss_pred cccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168 172 EHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM 234 (466)
Q Consensus 172 ~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l 234 (466)
+.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|..|+||||+|+..++.++++.|
T Consensus 307 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad----~~~~d~~g~t~l~~A~~~g~~~iv~~L 365 (373)
T 2fo1_E 307 DKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS----VEAVDATDHTARQLAQANNHHNIVDIF 365 (373)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----SSCCCSSSCCHHHHHHHTTCHHHHHHH
T ss_pred cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999999999999999998 999999999999999999999998776
No 35
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=4.9e-34 Score=283.34 Aligned_cols=208 Identities=16% Similarity=0.135 Sum_probs=186.4
Q ss_pred ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168 3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV 82 (466)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~ 82 (466)
.|+.+.|..++..+ .+++..|..|.||||+||..|+.++|++|++.+.+ ..+.+|.||||+|+..|+. ++
T Consensus 30 ~g~~~~v~~Ll~~g--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~g~t~L~~A~~~g~~-~~ 99 (364)
T 3ljn_A 30 KGQTDEVRRLIETG--VSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEV-------HSLWHGQKPIHLAVMANKT-DL 99 (364)
T ss_dssp HTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCC-------CCCBTTBCHHHHHHHTTCH-HH
T ss_pred cCCHHHHHHHHHcC--CCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-------ccccCCCCHHHHHHHcCCH-HH
Confidence 57778888777765 77889999999999999999999999999996542 2345899999999999996 99
Q ss_pred HHHHHHhC---CCcccC-----------------cCCCCChHHHHHHHcC--CHHHHHHHHhccCCCCCCCcccccccCC
Q 037168 83 ADKVLRKA---PGLLGM-----------------RNNNGETALLRAARYG--KVDIFNFLAGKISGYDHATRLPFLHRND 140 (466)
Q Consensus 83 v~~Ll~~~---~~~~~~-----------------~d~~G~tpLh~Aa~~g--~~~~v~~Ll~~~~~~~~~~~~~~~~d~~ 140 (466)
+++|++.. +..++. +|..|.||||+|+..| +.+++++|++. +.+++.+|.+
T Consensus 100 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~-------ga~~~~~d~~ 172 (364)
T 3ljn_A 100 VVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL-------GASPTAKDKA 172 (364)
T ss_dssp HHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH-------TCCTTCCCTT
T ss_pred HHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc-------CCCCcccCCC
Confidence 99999872 334444 8899999999999999 99999999999 6788899999
Q ss_pred CCChhhHHHHHhhcCcHHHHHHHHHHCCCc-----ccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCC
Q 037168 141 KTNVLHIAILSLHFGCIEIVKDILSVYPQA-----VEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNG 215 (466)
Q Consensus 141 g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~-----~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G 215 (466)
|+|||| .|+..|+.++++.|++ .+.+ ++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|
T Consensus 173 g~t~L~---~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad----~~~~d~~g 244 (364)
T 3ljn_A 173 DETPLM---RAMEFRNREALDLMMD-TVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGID----VNMEDNEH 244 (364)
T ss_dssp SCCHHH---HHHHTTCHHHHHHHHH-HCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCC----TTCCCTTS
T ss_pred CCCHHH---HHHHcCCHHHHHHHHh-cccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC----CCCCCCCC
Confidence 999999 7778999999999999 5556 999999999999999999999999999999999 89999999
Q ss_pred CCchhhhhccCcchhhhccC
Q 037168 216 NTIFHMAGIKRKDYVAEKME 235 (466)
Q Consensus 216 ~TpLHlAa~~~~~~~~~~l~ 235 (466)
+||||+|++.++.++++.|.
T Consensus 245 ~tpL~~A~~~g~~~~v~~Ll 264 (364)
T 3ljn_A 245 TVPLYLSVRAAMVLLTKELL 264 (364)
T ss_dssp CCHHHHHHHTCCHHHHHHHH
T ss_pred CCHHHHHHHhChHHHHHHHH
Confidence 99999999999999997773
No 36
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=6.2e-34 Score=274.38 Aligned_cols=207 Identities=19% Similarity=0.219 Sum_probs=181.8
Q ss_pred ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168 3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV 82 (466)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~ 82 (466)
.|+.+.+..++..+ .+++..|.+|.||||+||..|+.+++++|++ .+++++.+|..|.||||+|+..|+. ++
T Consensus 50 ~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~ga~~~~~~~~g~tpL~~A~~~g~~-~~ 121 (299)
T 1s70_B 50 SGDTEEVLRLLERG--ADINYANVDGLTALHQACIDDNVDMVKFLVE-----NGANINQPDNEGWIPLHAAASCGYL-DI 121 (299)
T ss_dssp HTCHHHHHHHHHHC--CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHHTCH-HH
T ss_pred cCCHHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCCCCCCCcHHHHHHHcCCH-HH
Confidence 58888888888876 6688899999999999999999999999999 5667889999999999999999997 99
Q ss_pred HHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCC--------------------CCCcccccccCCCC
Q 037168 83 ADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYD--------------------HATRLPFLHRNDKT 142 (466)
Q Consensus 83 v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~--------------------~~~~~~~~~d~~g~ 142 (466)
+++|+++ +.+++.+|..|.||||+|+..|+.++++.++....... .........+..|.
T Consensus 122 v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~ 200 (299)
T 1s70_B 122 AEYLISQ-GAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGG 200 (299)
T ss_dssp HHHHHHT-TCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCC
T ss_pred HHHHHhC-CCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCC
Confidence 9999998 77899999999999999999999999998886532100 00112223567899
Q ss_pred ChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhh
Q 037168 143 NVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMA 222 (466)
Q Consensus 143 TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlA 222 (466)
|||| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|..|+||||+|
T Consensus 201 t~L~---~A~~~g~~~~v~~Ll~-~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad----~~~~d~~g~t~l~~A 272 (299)
T 1s70_B 201 TALH---VAAAKGYTEVLKLLIQ-ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCD----MEAVNKVGQTAFDVA 272 (299)
T ss_dssp CHHH---HHHHHTCHHHHHHHHT-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCTTTSC
T ss_pred CHHH---HHHHCCcHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHH
Confidence 9999 7778899999999998 8999999999999999999999999999999999998 999999999999999
Q ss_pred hccC
Q 037168 223 GIKR 226 (466)
Q Consensus 223 a~~~ 226 (466)
++..
T Consensus 273 ~~~~ 276 (299)
T 1s70_B 273 DEDI 276 (299)
T ss_dssp CSGG
T ss_pred HHHH
Confidence 8643
No 37
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=5e-34 Score=280.60 Aligned_cols=220 Identities=16% Similarity=0.129 Sum_probs=194.7
Q ss_pred ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcC
Q 037168 19 HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRN 98 (466)
Q Consensus 19 ~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d 98 (466)
......+..|.|+||.||+.|+.+.++.|+.. .+.+++.+|..|+||||+|+..|+. +++++|+++ +.+++.+|
T Consensus 15 ~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~----~~~~~~~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~-g~~~~~~~ 88 (351)
T 3utm_A 15 AKAVLTGEYKKDELLEAARSGNEEKLMALLTP----LNVNCHASDGRKSTPLHLAAGYNRV-RIVQLLLQH-GADVHAKD 88 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHCCT----TTTTCCCSSTTCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCC
T ss_pred eeeeeeccccchhHHHHHHcCCHHHHHHHHHh----cCCCcccCCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCccC
Confidence 44556678899999999999999999999985 4567889999999999999999997 999999998 78899999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccc---
Q 037168 99 NNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHID--- 175 (466)
Q Consensus 99 ~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d--- 175 (466)
..|+||||+|+..|+.+++++|+++ +.+++.+|..|.|||| .|+..|+.++++.|++ .+.+++..|
T Consensus 89 ~~g~t~L~~A~~~g~~~iv~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g 157 (351)
T 3utm_A 89 KGGLVPLHNACSYGHYEVTELLLKH-------GACVNAMDLWQFTPLH---EAASKNRVEVCSLLLS-HGADPTLVNCHG 157 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTCCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTS
T ss_pred CCCCcHHHHHHHCCCHHHHHHHHHC-------CCCCCCCCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCCccccCCC
Confidence 9999999999999999999999998 6788889999999999 7778999999999998 677766543
Q ss_pred ---------------------------------------------------cCCChHHHHHHHc---CChhHHHHHHhcC
Q 037168 176 ---------------------------------------------------DEGRNILHVAIKY---RQLEIFERVVQME 201 (466)
Q Consensus 176 ---------------------------------------------------~~G~t~Lh~A~~~---~~~~iv~~Ll~~g 201 (466)
..|+||||+|+.. ++.+++++|++.|
T Consensus 158 ~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g 237 (351)
T 3utm_A 158 KSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKG 237 (351)
T ss_dssp CCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTT
T ss_pred CcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcC
Confidence 5678999999999 5579999999999
Q ss_pred cccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHHh
Q 037168 202 IPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIAN 278 (466)
Q Consensus 202 ~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~~ 278 (466)
++ +|.+|.+|+||||+|++.++.++++.| +..+.+++.+|..|+||++++.+..
T Consensus 238 ~~----~~~~~~~g~t~L~~A~~~g~~~~v~~L-------------------l~~ga~~n~~d~~g~t~L~~A~~~~ 291 (351)
T 3utm_A 238 AN----VNEKNKDFMTPLHVAAERAHNDVMEVL-------------------HKHGAKMNALDSLGQTALHRAALAG 291 (351)
T ss_dssp CC----TTCCCTTCCCHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CC----cCCcCCCCCCHHHHHHHcCCHHHHHHH-------------------HHCCCCCCCcCCCCCCHHHHHHHcC
Confidence 98 999999999999999999999988766 2235567889999999999998654
No 38
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.9e-33 Score=257.96 Aligned_cols=208 Identities=14% Similarity=0.168 Sum_probs=185.8
Q ss_pred ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhh-ccCCCCChHHHHHHHcCCcHH
Q 037168 3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMT-RQNKAGNTILHETATSNHALP 81 (466)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~~d~~G~TpLh~Aa~~g~~~~ 81 (466)
.|+.+.+..++..+ .+++..+..|.||||+|+..|+.+++++|++.+++ ++ ..+..|.||||+|+..|+. +
T Consensus 19 ~g~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~-----~~~~~~~~~~t~L~~A~~~~~~-~ 90 (240)
T 3eu9_A 19 YGIYERCRELVEAG--YDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAI-----VDQLGGDLNSTPLHWATRQGHL-S 90 (240)
T ss_dssp TTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCBTTTTBCHHHHHHHHTCH-H
T ss_pred cCChHHHHHHHHcC--CCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCc-----chhhcCCcCCChhHHHHHcCCH-H
Confidence 57888888777765 67888999999999999999999999999996543 33 4456699999999999996 9
Q ss_pred HHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCc-HHHH
Q 037168 82 VADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGC-IEIV 160 (466)
Q Consensus 82 ~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~-~~~v 160 (466)
+++.|++. +.+++.+|..|.||||+|+..|+.+++++|++. +.+++.+|.+|.|||| .|+..++ .+++
T Consensus 91 ~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-------~~~~~~~~~~g~t~l~---~a~~~~~~~~~~ 159 (240)
T 3eu9_A 91 MVVQLMKY-GADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAK-------GQDVDMMDQNGMTPLM---WAAYRTHSVDPT 159 (240)
T ss_dssp HHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHHCCSSTTH
T ss_pred HHHHHHHc-CCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhc-------CCCccccCCCCCcHHH---HHHHhCChHHHH
Confidence 99999988 778999999999999999999999999999998 6678889999999999 5554454 7888
Q ss_pred HHHHHHCCCccccccc-CCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168 161 KDILSVYPQAVEHIDD-EGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM 234 (466)
Q Consensus 161 ~~Ll~~~~~~~~~~d~-~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l 234 (466)
+.|++ .+.+++..+. .|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|++.++.++++.|
T Consensus 160 ~~L~~-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~l~~A~~~~~~~~v~~L 229 (240)
T 3eu9_A 160 RLLLT-FNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN----VDAQNIKGESALDLAKQRKNVWMINHL 229 (240)
T ss_dssp HHHHH-TTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC----TTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred HHHHh-cCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence 88888 8899999997 999999999999999999999999998 899999999999999999999998776
No 39
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=9.4e-33 Score=243.81 Aligned_cols=157 Identities=24% Similarity=0.266 Sum_probs=145.6
Q ss_pred cHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHH
Q 037168 30 TVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAA 109 (466)
Q Consensus 30 T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa 109 (466)
++|+.||+.|+.++|+.||+ .|++++.+|.+|+||||+|+..++. ++++.|++. +.+++.+|.+|+||||+|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~-----~Gadvn~~d~~g~t~l~~a~~~~~~-~~~~~ll~~-gad~~~~d~~g~TpLh~A~ 78 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIE-----NGADVNASDSDGRTPLHHAAENGHK-EVVKLLISK-GADVNAKDSDGRTPLHHAA 78 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHH-----CCCCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHhc-ccchhhhccCCCCHHHHHH
Confidence 47999999999999999999 5677899999999999999999996 999999988 7889999999999999999
Q ss_pred HcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcC
Q 037168 110 RYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYR 189 (466)
Q Consensus 110 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~ 189 (466)
..|+.+++++|++. +++++.+|.+|+|||| .|+..|+.++++.|++ .+++++.+|.+|+||||+|+.+|
T Consensus 79 ~~g~~~~v~~Ll~~-------gadvn~~d~~G~TpLh---~A~~~g~~~~v~~Ll~-~gad~~~~d~~G~TpL~~A~~~g 147 (169)
T 4gpm_A 79 ENGHKEVVKLLISK-------GADVNAKDSDGRTPLH---HAAENGHKEVVKLLIS-KGADVNTSDSDGRTPLDLAREHG 147 (169)
T ss_dssp HTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTT
T ss_pred HcCCHHHHHHHHHC-------cCCCCCCCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcC
Confidence 99999999999998 7789999999999999 7778999999999998 89999999999999999999999
Q ss_pred ChhHHHHHHhcCccc
Q 037168 190 QLEIFERVVQMEIPL 204 (466)
Q Consensus 190 ~~~iv~~Ll~~g~~~ 204 (466)
+.+++++|+++|++.
T Consensus 148 ~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 148 NEEVVKLLEKQGGWL 162 (169)
T ss_dssp CHHHHHHHHTC----
T ss_pred CHHHHHHHHHCCCCc
Confidence 999999999999983
No 40
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.3e-33 Score=266.21 Aligned_cols=188 Identities=18% Similarity=0.153 Sum_probs=165.2
Q ss_pred CCCcHHHHHHHcCCHH----HHHHHHHhCCCCchhhhhc----cCCCCChHHHHHHHc---CCcHHHHHHHHHhCCCccc
Q 037168 27 HDDTVLHMATYTKKSD----LVIKLLDELPDQSLDKMTR----QNKAGNTILHETATS---NHALPVADKVLRKAPGLLG 95 (466)
Q Consensus 27 ~g~T~Lh~A~~~g~~~----~v~~Ll~~~~~~~~~~~~~----~d~~G~TpLh~Aa~~---g~~~~~v~~Ll~~~~~~~~ 95 (466)
.|+||||.||+.|+.+ ++++|++ .+.+++. +|..|+||||+|+.. |+. +++++|++. +.+++
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~-----~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~-~~v~~Ll~~-g~~~~ 73 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRW-----NSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVN-ACIMPLLQI-DKDSG 73 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHH-----HTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBC-TTHHHHHHH-HHHTT
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHH-----cCCCcccccccCCCCCCCHHHHHHHccccchH-HHHHHHHhc-CCccc
Confidence 4889999999999997 5566666 4456776 899999999999999 997 999999988 33333
Q ss_pred -----------CcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCC-------------CCChhhHHHHH
Q 037168 96 -----------MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRND-------------KTNVLHIAILS 151 (466)
Q Consensus 96 -----------~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~-------------g~TpLh~A~~a 151 (466)
.+|..|+||||+|+..|+.+++++|++. +++++.+|.. |+|||| .|
T Consensus 74 ~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga~~~~~~~~~~~~~~~~~~~~~g~tpL~---~A 143 (256)
T 2etb_A 74 NPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVEN-------GADVHLRACGRFFQKHQGTCFYFGELPLS---LA 143 (256)
T ss_dssp CSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCCSGGGSCCSSSCCCSCSSHHH---HH
T ss_pred chhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCcccccccccccccccccCCCCHHH---HH
Confidence 2457899999999999999999999998 5567777765 999999 77
Q ss_pred hhcCcHHHHHHHHHH--CCCcccccccCCChHHHHHHH--cCChh-------HHHHHHhcCccccccc-------ccccC
Q 037168 152 LHFGCIEIVKDILSV--YPQAVEHIDDEGRNILHVAIK--YRQLE-------IFERVVQMEIPLRRLV-------RKIDY 213 (466)
Q Consensus 152 ~~~g~~~~v~~Ll~~--~~~~~~~~d~~G~t~Lh~A~~--~~~~~-------iv~~Ll~~g~~~~~~~-------~~~d~ 213 (466)
+..|+.++++.|++. .+++++.+|..|+||||+|+. +++.+ ++++|+++|++ + +.+|.
T Consensus 144 ~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~----~~~~~~~~~~~d~ 219 (256)
T 2etb_A 144 ACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGAR----LCPTVQLEEISNH 219 (256)
T ss_dssp HHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH----HSTTCCGGGCCCT
T ss_pred HHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCC----cccccccccccCC
Confidence 789999999999986 789999999999999999999 78888 99999999998 6 89999
Q ss_pred CCCCchhhhhccCcchhhhccC
Q 037168 214 NGNTIFHMAGIKRKDYVAEKME 235 (466)
Q Consensus 214 ~G~TpLHlAa~~~~~~~~~~l~ 235 (466)
+|+||||+|++.|+.++++.|.
T Consensus 220 ~g~tpL~~A~~~g~~~~v~~Ll 241 (256)
T 2etb_A 220 QGLTPLKLAAKEGKIEIFRHIL 241 (256)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCCHHHHHHHhCCHHHHHHHH
Confidence 9999999999999999997773
No 41
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1e-33 Score=269.65 Aligned_cols=203 Identities=18% Similarity=0.151 Sum_probs=167.0
Q ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhh----ccCCCCChHHHHHHHc---CCcHHHHHHHHHhCCC
Q 037168 20 ALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMT----RQNKAGNTILHETATS---NHALPVADKVLRKAPG 92 (466)
Q Consensus 20 ~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~----~~d~~G~TpLh~Aa~~---g~~~~~v~~Ll~~~~~ 92 (466)
..+..|..|+||||.||+.|+.++|+.|++.+.+ .+.+++ ..|..|+||||+|+.. |+. +++++|++.+..
T Consensus 5 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~-~~v~~Ll~~ga~ 82 (273)
T 2pnn_A 5 GEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQR-SKKRLTDSEFKDPETGKTCLLKAMLNLHNGQN-DTIALLLDVARK 82 (273)
T ss_dssp ------CCCHHHHHHHHHTTCSSTTTTHHHHHHH-SCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBC-HHHHHHHHHHHH
T ss_pred cCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhh-cccccCCcccccCcCCCCHHHHHHHHHhcCCh-HHHHHHHHhhcc
Confidence 3556799999999999999999999999985332 122333 4588999999999986 887 999999998321
Q ss_pred ----------cccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccC--------------CCCChhhHH
Q 037168 93 ----------LLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRN--------------DKTNVLHIA 148 (466)
Q Consensus 93 ----------~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~--------------~g~TpLh~A 148 (466)
....+|..|+||||+|+..|+.+++++|++. +.+++.+|. .|.||||
T Consensus 83 ~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-------ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~-- 153 (273)
T 2pnn_A 83 TDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVEN-------GADVQAAANGDFFKKTKGRPGFYFGELPLS-- 153 (273)
T ss_dssp TTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCBCSGGGSSCSSSCCCCSCBSHHH--
T ss_pred ccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHC-------CCCcCccccccccccccccccccCCCCHHH--
Confidence 1223677999999999999999999999998 556666665 7999999
Q ss_pred HHHhhcCcHHHHHHHHHH--CCCcccccccCCChHHHHHHHcCC---------hhHHHHHHhcCccccc---ccccccCC
Q 037168 149 ILSLHFGCIEIVKDILSV--YPQAVEHIDDEGRNILHVAIKYRQ---------LEIFERVVQMEIPLRR---LVRKIDYN 214 (466)
Q Consensus 149 ~~a~~~g~~~~v~~Ll~~--~~~~~~~~d~~G~t~Lh~A~~~~~---------~~iv~~Ll~~g~~~~~---~~~~~d~~ 214 (466)
.|+..|+.+++++|++. .+++++.+|..|+||||+|+..|+ .+++++|+++|++.+. .++.+|.+
T Consensus 154 -~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~ 232 (273)
T 2pnn_A 154 -LAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRK 232 (273)
T ss_dssp -HHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTT
T ss_pred -HHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCC
Confidence 77789999999999986 789999999999999999999998 7999999999988221 11469999
Q ss_pred CCCchhhhhccCcchhhhcc
Q 037168 215 GNTIFHMAGIKRKDYVAEKM 234 (466)
Q Consensus 215 G~TpLHlAa~~~~~~~~~~l 234 (466)
|+||||+|++.++.++++.|
T Consensus 233 g~TpL~~A~~~g~~~iv~~L 252 (273)
T 2pnn_A 233 GLTPLALAASSGKIGVLAYI 252 (273)
T ss_dssp SCCHHHHHHHTTCHHHHHHH
T ss_pred CCCHHHHHHHhChHHHHHHH
Confidence 99999999999999999777
No 42
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=3.6e-33 Score=273.30 Aligned_cols=198 Identities=15% Similarity=0.153 Sum_probs=159.9
Q ss_pred hHHHHHHHHhCCCccccc-cCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCC---cHH
Q 037168 6 EQKVIELCRKVPDHALYV-FTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNH---ALP 81 (466)
Q Consensus 6 ~~~v~~ll~~~~~~~~~~-~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~---~~~ 81 (466)
.+++.+++.+. +.+++. .|.+|+||||+||..|+.++|++|++ ++++++.+|..|+||||+|+..|+ . +
T Consensus 109 ~~~~~~~l~~~-g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~-----~Gad~n~~d~~g~TpLh~A~~~g~~~~~-~ 181 (327)
T 1sw6_A 109 LQEVNDAFPNT-QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVK-----HGSNRLYGDNMGESCLVKAVKSVNNYDS-G 181 (327)
T ss_dssp HHHHHHHCTTS-CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTBCCTTCCCHHHHHHHSSHHHHT-T
T ss_pred HHHHHHHHHhc-CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCCHHHHHHHhcccccH-H
Confidence 45566666665 477888 89999999999999999999999999 567789999999999999999987 5 7
Q ss_pred HHHHHHHhCCCcccCcCCCCChHHHHHHH----cCCHHHHHHHHhccC-------------CCCCCCcccccccCCCCCh
Q 037168 82 VADKVLRKAPGLLGMRNNNGETALLRAAR----YGKVDIFNFLAGKIS-------------GYDHATRLPFLHRNDKTNV 144 (466)
Q Consensus 82 ~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~----~g~~~~v~~Ll~~~~-------------~~~~~~~~~~~~d~~g~Tp 144 (466)
+++.|++...++++.+|..|+||||+|+. .|+.+++++|++... .....+.+++.+|.+|+||
T Consensus 182 ~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~ 261 (327)
T 1sw6_A 182 TFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDS 261 (327)
T ss_dssp CHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CH
T ss_pred HHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCCh
Confidence 77888888667899999999999999999 899999999998632 1112257888899999999
Q ss_pred hhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhc
Q 037168 145 LHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGI 224 (466)
Q Consensus 145 Lh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~ 224 (466)
|| .++. +++|++. +++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|++
T Consensus 262 L~---~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad----~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 262 IL---ENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD----PFIANKSGLRPVDFGAG 325 (327)
T ss_dssp HH---HHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC----TTCCCTTSCCGGGGTCC
T ss_pred hH---HHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CcccCCCCCCHHHHHHh
Confidence 99 4443 8889885 6899999999999999999999999999999999 99999999999999997
Q ss_pred cC
Q 037168 225 KR 226 (466)
Q Consensus 225 ~~ 226 (466)
.|
T Consensus 326 ~g 327 (327)
T 1sw6_A 326 LE 327 (327)
T ss_dssp --
T ss_pred cC
Confidence 64
No 43
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=4.8e-33 Score=256.40 Aligned_cols=200 Identities=16% Similarity=0.191 Sum_probs=176.0
Q ss_pred CCHHHHHHHHHhCCCCchhhhhc-cCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHH
Q 037168 39 KKSDLVIKLLDELPDQSLDKMTR-QNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIF 117 (466)
Q Consensus 39 g~~~~v~~Ll~~~~~~~~~~~~~-~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v 117 (466)
|+.+++++|++.++ +++. .|..|+||||+|+..|+. +++++|+++ +.+++.+|..|+||||+|+..|+.+++
T Consensus 2 g~~~~i~~Ll~~g~-----~~~~~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v 74 (223)
T 2f8y_A 2 DAPAVISDFIYQGA-----SLHNQTDRTGETALHLAARYSRS-DAAKRLLEA-SADANIQDNMGRTPLHAAVSADAQGVF 74 (223)
T ss_dssp ---CCEETTEETTC-----CTTCCCTTTCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CcHHHHHHHHHcCC-----CcccccCCCCCchHHHHHHcCCH-HHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 67888999999544 4444 489999999999999996 999999998 778999999999999999999999999
Q ss_pred HHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHH
Q 037168 118 NFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERV 197 (466)
Q Consensus 118 ~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~L 197 (466)
++|++.++ .+++.+|.+|.|||| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|
T Consensus 75 ~~Ll~~~~------~~~~~~~~~g~t~L~---~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 144 (223)
T 2f8y_A 75 QILIRNRA------TDLDARMHDGTTPLI---LAARLAVEGMLEDLIN-SHADVNAVDDLGKSALHWAAAVNNVDAAVVL 144 (223)
T ss_dssp HHHHHBTT------SCTTCCCTTCCCHHH---HHHHHTCHHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred HHHHHcCC------CCcccCCCCCCcHHH---HHHHhCcHHHHHHHHH-cCCCCcCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 99999843 367788999999999 6778899999999999 8899999999999999999999999999999
Q ss_pred HhcCcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHHH
Q 037168 198 VQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAIA 277 (466)
Q Consensus 198 l~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~~ 277 (466)
+++|++ ++.+|..|+||||+|++.++.++++.| +..+.+.+.+|..|+||++++.+.
T Consensus 145 l~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~L-------------------l~~ga~~~~~~~~g~t~l~~A~~~ 201 (223)
T 2f8y_A 145 LKNGAN----KDMQNNREETPLFLAAREGSYETAKVL-------------------LDHFANRDITDHMDRLPRDIAQER 201 (223)
T ss_dssp HHTTCC----TTCCCTTCCCHHHHHHHHTCHHHHHHH-------------------HHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHcCCC----CCCcCCCCcCHHHHHHHcCCHHHHHHH-------------------HHcCCCCccccccCCCHHHHHHHh
Confidence 999998 899999999999999999999988666 223445688999999999999876
Q ss_pred h
Q 037168 278 N 278 (466)
Q Consensus 278 ~ 278 (466)
.
T Consensus 202 ~ 202 (223)
T 2f8y_A 202 M 202 (223)
T ss_dssp T
T ss_pred c
Confidence 4
No 44
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.98 E-value=1.3e-31 Score=242.79 Aligned_cols=183 Identities=19% Similarity=0.178 Sum_probs=168.0
Q ss_pred CccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHH
Q 037168 2 IKQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALP 81 (466)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~ 81 (466)
.+|+.+.+..++.+. ..+++..|.+|.||||+|++.|+.+++++|++ .+++++.+|..|.||||+|+..|+. +
T Consensus 14 ~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~l~~A~~~~~~-~ 86 (201)
T 3hra_A 14 NQRDTKKVKEILQDT-TYQVDEVDTEGNTPLNIAVHNNDIEIAKALID-----RGADINLQNSISDSPYLYAGAQGRT-E 86 (201)
T ss_dssp HTTCHHHHHHHHTCT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH-H
T ss_pred HhccHHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCCCCCCCCHHHHHHHcCCH-H
Confidence 368889999998876 45788899999999999999999999999999 5667889999999999999999996 9
Q ss_pred HHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCc-----
Q 037168 82 VADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGC----- 156 (466)
Q Consensus 82 ~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~----- 156 (466)
++++|++..+.+++.+|..|.||||+|+..|+.+++++|++.+. .+++.+|.+|+|||| .|+..++
T Consensus 87 ~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------~~~~~~~~~g~t~L~---~A~~~~~~~~~~ 157 (201)
T 3hra_A 87 ILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGR------EDIDFQNDFGYTALI---EAVGLREGNQLY 157 (201)
T ss_dssp HHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCC------CCTTCCCTTSCCHHH---HHHHSSCCSHHH
T ss_pred HHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCC------CCcCCCCCCCCCHHH---HHHHhccchhhH
Confidence 99999988888999999999999999999999999999999832 678899999999999 5566666
Q ss_pred HHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcC
Q 037168 157 IEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQME 201 (466)
Q Consensus 157 ~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g 201 (466)
.++++.|++ .+++++.+|..|+||||+|+.+|+.+++++|+++|
T Consensus 158 ~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 158 QDIVKLLME-NGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHHHHH-CCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 999999998 89999999999999999999999999999999876
No 45
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=4.1e-32 Score=256.46 Aligned_cols=194 Identities=16% Similarity=0.125 Sum_probs=164.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHH----hCCCCchhhhhcc----CCCCChHHHHHH---HcCCcHHHHHHHHHhCC--
Q 037168 25 TIHDDTVLHMATYTKKSDLVIKLLD----ELPDQSLDKMTRQ----NKAGNTILHETA---TSNHALPVADKVLRKAP-- 91 (466)
Q Consensus 25 ~~~g~T~Lh~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~~----d~~G~TpLh~Aa---~~g~~~~~v~~Ll~~~~-- 91 (466)
+..|+|+||.||+.|+.+.++.|++ .+. +++.. |..|.||||+|+ +.|+. +++++|++.+.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~-----~~~~~~~~~~~~g~t~L~~A~~~~~~g~~-~~v~~Ll~~g~~~ 75 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKK-----RLTDEEFREPSTGKTCLPKALLNLSAGRN-DTIPILLDIAEKT 75 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTC-----CTTSGGGSCTTTCCCHHHHHHTSCBTTBC-THHHHHHHHHHHT
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCC-----CcchhhhhccCCCCcHHHHHHHHhhcCCH-HHHHHHHHhcccc
Confidence 5678999999999999996655555 443 34433 478999999999 67997 99999999731
Q ss_pred --------CcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCccccccc--------------CCCCChhhHHH
Q 037168 92 --------GLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR--------------NDKTNVLHIAI 149 (466)
Q Consensus 92 --------~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d--------------~~g~TpLh~A~ 149 (466)
...+..|..|+||||+|+..|+.+++++|++. +++++.+| ..|+||||
T Consensus 76 ~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~--- 145 (260)
T 3jxi_A 76 GNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEK-------GADVHAQARGRFFQPKDEGGYFYFGELPLS--- 145 (260)
T ss_dssp TCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCEECCCSSSCCCCSCCSCSSHHH---
T ss_pred cchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhC-------CCCcCccccccccCcccccccccCCCCHHH---
Confidence 33556677999999999999999999999998 55667776 68999999
Q ss_pred HHhhcCcHHHHHHHHHH--CCCcccccccCCChHHHHHHHcCC---------hhHHHHHHhcCccccc---ccccccCCC
Q 037168 150 LSLHFGCIEIVKDILSV--YPQAVEHIDDEGRNILHVAIKYRQ---------LEIFERVVQMEIPLRR---LVRKIDYNG 215 (466)
Q Consensus 150 ~a~~~g~~~~v~~Ll~~--~~~~~~~~d~~G~t~Lh~A~~~~~---------~~iv~~Ll~~g~~~~~---~~~~~d~~G 215 (466)
.|+..|+.++++.|++. .+++++.+|..|+||||+|+..++ .+++++|+++|++... +.+.+|.+|
T Consensus 146 ~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g 225 (260)
T 3jxi_A 146 LAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDG 225 (260)
T ss_dssp HHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTS
T ss_pred HHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCC
Confidence 77789999999999985 789999999999999999999887 6999999999988210 117899999
Q ss_pred CCchhhhhccCcchhhhcc
Q 037168 216 NTIFHMAGIKRKDYVAEKM 234 (466)
Q Consensus 216 ~TpLHlAa~~~~~~~~~~l 234 (466)
+||||+|++.|+.++++.|
T Consensus 226 ~tpL~~A~~~g~~~~v~~L 244 (260)
T 3jxi_A 226 LSPLMMAAKTGKIGIFQHI 244 (260)
T ss_dssp CCHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHH
Confidence 9999999999999999777
No 46
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=4.2e-31 Score=259.39 Aligned_cols=196 Identities=16% Similarity=0.144 Sum_probs=152.1
Q ss_pred ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCc-----hhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCc
Q 037168 19 HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQS-----LDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGL 93 (466)
Q Consensus 19 ~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~-----~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~ 93 (466)
.+++..|..|.||||+|+..|+.++++.|++.+.+.. .......+..|.||||+|+..|+. +++++|+++.+++
T Consensus 116 ~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~-~~v~~LL~~~gad 194 (337)
T 4g8k_A 116 ADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV-EVLKILLDEMGAD 194 (337)
T ss_dssp CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCH-HHHHHHHHHSCCC
T ss_pred chhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCH-HHHHHHHhccCCC
Confidence 3456677888888888888888888888888654421 223445567788888888888886 8888888877888
Q ss_pred ccCcCCCCChHHHHHHHcCC----HHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCC
Q 037168 94 LGMRNNNGETALLRAARYGK----VDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQ 169 (466)
Q Consensus 94 ~~~~d~~G~tpLh~Aa~~g~----~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~ 169 (466)
++.+|..|.||+|.++..++ .+++++|+++ |++++.+|.+|+|||| .|+..|+.++++.|++..+.
T Consensus 195 ~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~-------gad~n~~d~~g~t~L~---~a~~~~~~~~v~~Ll~~~~~ 264 (337)
T 4g8k_A 195 VNACDNMGRNALIHALLSSDDSDVEAITHLLLDH-------GADVNVRGERGKTPLI---LAVEKKHLGLVQRLLEQEHI 264 (337)
T ss_dssp TTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHT-------TCCTTCCCGGGCCHHH---HHHHTTCHHHHHHHHTSTTC
T ss_pred cCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHC-------CCCCCCcCCCCCCHHH---HHHHhhhhHHHHHHHHhcCC
Confidence 88888888888888776544 3577888887 6677888888888888 66678888888888876778
Q ss_pred cccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168 170 AVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM 234 (466)
Q Consensus 170 ~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l 234 (466)
+++.+|.+|+||||+|+++|+.+++++|+++|++ +|. .||||+|++.++.+++++|
T Consensus 265 ~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd----~n~-----~~~L~~A~~~~~~~iv~~L 320 (337)
T 4g8k_A 265 EINDTDSDGKTALLLAVELKLKKIAELLCKRGAS----TDC-----GDLVMTARRNYDHSLVKVL 320 (337)
T ss_dssp CTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCS----STT-----CCHHHHHHHTTCHHHHHHH
T ss_pred cccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCC-----CCHHHHHHHcCCHHHHHHH
Confidence 8888888888888888888888888888888877 443 4588888888888888766
No 47
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=5.2e-31 Score=244.40 Aligned_cols=187 Identities=19% Similarity=0.206 Sum_probs=164.2
Q ss_pred ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168 3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV 82 (466)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~ 82 (466)
.|+.+.+..++.+. +.+++..|.+|+||||+|+..|+.+++++|++.+++......+.+|..|.||||+|+..|+. ++
T Consensus 13 ~g~~~~v~~Ll~~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~-~~ 90 (232)
T 2rfa_A 13 ENDVQALSKLLKFE-GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNV-NL 90 (232)
T ss_dssp TTCHHHHHHHHTTT-CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCH-HH
T ss_pred cCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCH-HH
Confidence 57778888777764 47789999999999999999999999999999765432223367788999999999999996 99
Q ss_pred HHHHHHhCCCcccCcCC-------------CCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHH
Q 037168 83 ADKVLRKAPGLLGMRNN-------------NGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAI 149 (466)
Q Consensus 83 v~~Ll~~~~~~~~~~d~-------------~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~ 149 (466)
+++|+++ +.+++.++. .|+||||+|+..|+.+++++|+++ +++++.+|.+|+||||
T Consensus 91 v~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------ga~~~~~d~~g~t~L~--- 159 (232)
T 2rfa_A 91 VRALLAR-GASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH-------GADIRAQDSLGNTVLH--- 159 (232)
T ss_dssp HHHHHHT-TCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---
T ss_pred HHHHHhC-CCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC-------CCCCCCCCCCCCCHHH---
Confidence 9999998 667777765 799999999999999999999998 6788999999999999
Q ss_pred HHhhcCcHHHH----HHHHHHCCCcc------cccccCCChHHHHHHHcCChhHHHHHHhcCcc
Q 037168 150 LSLHFGCIEIV----KDILSVYPQAV------EHIDDEGRNILHVAIKYRQLEIFERVVQMEIP 203 (466)
Q Consensus 150 ~a~~~g~~~~v----~~Ll~~~~~~~------~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~ 203 (466)
.|+..|+.+++ +.|++ .+.+. +.+|..|+||||+|+.+|+.+++++|+++|.+
T Consensus 160 ~A~~~~~~~~~~~i~~~Ll~-~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 160 ILILQPNKTFACQMYNLLLS-YDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp HHHTCSCHHHHHHHHHHHHH-TTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHcCChHHHHHHHHHHHh-cCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 77789999988 88888 66666 68999999999999999999999999999876
No 48
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=3e-32 Score=253.72 Aligned_cols=204 Identities=18% Similarity=0.184 Sum_probs=174.1
Q ss_pred cchHHHHHHHHhCCC--ccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHH
Q 037168 4 QDEQKVIELCRKVPD--HALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALP 81 (466)
Q Consensus 4 g~~~~v~~ll~~~~~--~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~ 81 (466)
|+.+.+..++..... .+++..|..|.||||+|+..|+.+++++|++ .+++++.+|..|.||||+|+..|+. +
T Consensus 19 g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~ 92 (236)
T 1ikn_D 19 EEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG-----AGCDPELRDFRGNTPLHLACEQGCL-A 92 (236)
T ss_dssp TCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCS-----CCCCSCCCCTTCCCHHHHHHHHTCH-H
T ss_pred CChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCCHHHHHHHcCCH-H
Confidence 444444444444322 3678899999999999999999999999999 5567888999999999999999996 9
Q ss_pred HHHHHHHhCC-----CcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccC-CCCChhhHHHHHhhcC
Q 037168 82 VADKVLRKAP-----GLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRN-DKTNVLHIAILSLHFG 155 (466)
Q Consensus 82 ~v~~Ll~~~~-----~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~-~g~TpLh~A~~a~~~g 155 (466)
+++.|++.+. ..++..|..|.||||+|+..|+.+++++|++. +.+++.+|. .|+|||| .|+..|
T Consensus 93 ~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~~g~tpL~---~A~~~~ 162 (236)
T 1ikn_D 93 SVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL-------GADVNAQEPCNGRTALH---LAVDLQ 162 (236)
T ss_dssp HHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH-------TCCTTCCCTTTCCCHHH---HHHHTT
T ss_pred HHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCCCCCCCCCCHHH---HHHHcC
Confidence 9999999853 33688899999999999999999999999998 678888887 9999999 777899
Q ss_pred cHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccC
Q 037168 156 CIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKR 226 (466)
Q Consensus 156 ~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~ 226 (466)
+.++++.|++ +|++++.+|..|+||||+|+.+|+.+++++|+++|++. .....+.+|.||.+.+....
T Consensus 163 ~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~--~~~~~~~~~~~~~~~~~~~~ 230 (236)
T 1ikn_D 163 NPDLVSLLLK-CGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN--LQMLPESEDEESYDTESEFT 230 (236)
T ss_dssp CHHHHHHHHT-TTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGG--GSSCCCCCTTTCCCCC----
T ss_pred CHHHHHHHHH-cCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhh--hhcCCccchHHHHhhhcccc
Confidence 9999999999 79999999999999999999999999999999999872 24578999999999887543
No 49
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=4.3e-31 Score=233.12 Aligned_cols=153 Identities=22% Similarity=0.270 Sum_probs=144.6
Q ss_pred hHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhH
Q 037168 68 TILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHI 147 (466)
Q Consensus 68 TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~ 147 (466)
++|+.||+.|+. ++|+.|++. |++++.+|.+|+||||+|+..++.+++++|++. +.+++.+|.+|+||||
T Consensus 6 ~~L~~Aa~~G~~-~~v~~Ll~~-Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~-------gad~~~~d~~g~TpLh- 75 (169)
T 4gpm_A 6 KRLIEAAENGNK-DRVKDLIEN-GADVNASDSDGRTPLHHAAENGHKEVVKLLISK-------GADVNAKDSDGRTPLH- 75 (169)
T ss_dssp HHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH-
T ss_pred HHHHHHHHcCCH-HHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhc-------ccchhhhccCCCCHHH-
Confidence 579999999997 999999998 788999999999999999999999999999998 6788999999999999
Q ss_pred HHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCc
Q 037168 148 AILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRK 227 (466)
Q Consensus 148 A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~ 227 (466)
.|+..|+.++++.|++ .++++|.+|.+|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|++.++
T Consensus 76 --~A~~~g~~~~v~~Ll~-~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad----~~~~d~~G~TpL~~A~~~g~ 148 (169)
T 4gpm_A 76 --HAAENGHKEVVKLLIS-KGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD----VNTSDSDGRTPLDLAREHGN 148 (169)
T ss_dssp --HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTC
T ss_pred --HHHHcCCHHHHHHHHH-CcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccccCCCCCCHHHHHHHcCC
Confidence 7778999999999998 8999999999999999999999999999999999998 99999999999999999999
Q ss_pred chhhhccCCh
Q 037168 228 DYVAEKMEGP 237 (466)
Q Consensus 228 ~~~~~~l~~~ 237 (466)
.+++++|...
T Consensus 149 ~~iv~~Ll~~ 158 (169)
T 4gpm_A 149 EEVVKLLEKQ 158 (169)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHHC
Confidence 9999887443
No 50
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=3e-32 Score=266.76 Aligned_cols=231 Identities=14% Similarity=0.149 Sum_probs=172.0
Q ss_pred CccchHHHHHHHHhCCCccccc---------------cCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhc-cCCC
Q 037168 2 IKQDEQKVIELCRKVPDHALYV---------------FTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTR-QNKA 65 (466)
Q Consensus 2 ~~g~~~~v~~ll~~~~~~~~~~---------------~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~d~~ 65 (466)
..|+.+.|..++.++-+...+. ......+.+|.|+..+..++++.|++ .+.+++. +|..
T Consensus 56 ~~g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~-----~g~dvn~~~d~~ 130 (327)
T 1sw6_A 56 DNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPN-----TQLNLNIPVDEH 130 (327)
T ss_dssp CHHHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTT-----SCCCSCSCCSTT
T ss_pred cCchhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHh-----cCCCcccccCCC
Confidence 3477788888887762211100 11112234588888888888888888 5677888 8999
Q ss_pred CChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCC---HHHHHHHHhccCCCCCCCcccccccCCCC
Q 037168 66 GNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGK---VDIFNFLAGKISGYDHATRLPFLHRNDKT 142 (466)
Q Consensus 66 G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~---~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~ 142 (466)
|+||||+|+..|+. +++++|+++ +++++.+|.+|+||||+|+..|+ .++++.|++... .+++.+|.+|+
T Consensus 131 g~TpLh~Aa~~g~~-~~v~~Ll~~-Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~------~~~~~~d~~g~ 202 (327)
T 1sw6_A 131 GNTPLHWLTSIANL-ELVKHLVKH-GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLY------PCLILEDSMNR 202 (327)
T ss_dssp CCCHHHHHHHTTCH-HHHHHHHHT-TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHG------GGGGEECTTCC
T ss_pred CCcHHHHHHHcCCH-HHHHHHHHc-CCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhh------ccccCCCCCCC
Confidence 99999999999996 999999998 78899999999999999999998 788888888742 46889999999
Q ss_pred ChhhHHHHHh-hcCcHHHHHHHHHHC-------------------CCcccccccCCChHHHHHHHcCChhHHHHHHhcCc
Q 037168 143 NVLHIAILSL-HFGCIEIVKDILSVY-------------------PQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEI 202 (466)
Q Consensus 143 TpLh~A~~a~-~~g~~~~v~~Ll~~~-------------------~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~ 202 (466)
||||+|+... ..|+.++++.|++.. +.+++.+|..|+||||.|+. +++|++++
T Consensus 203 tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~~- 275 (327)
T 1sw6_A 203 TILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIANM- 275 (327)
T ss_dssp CHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHHT-
T ss_pred CHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHhC-
Confidence 9999543211 189999999999852 88999999999999999985 89999873
Q ss_pred ccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCcccccccccCCCCChHHHHHH
Q 037168 203 PLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPHFLNHRNNMGFIPEELFAI 276 (466)
Q Consensus 203 ~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp~~l~~~ 276 (466)
+|.+|.+|+||||+|++.++.++++.| +..+.+++.+|++|+||++++.+
T Consensus 276 -----~n~~d~~G~TpLh~A~~~g~~~~v~~L-------------------l~~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 276 -----LNAQDSNGDTCLNIAARLGNISIVDAL-------------------LDYGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp -----TTCCCTTSCCHHHHHHHHCCHHHHHHH-------------------HHTTCCTTCCCTTSCCGGGGTCC
T ss_pred -----CCCCCCCCCCHHHHHHHcCCHHHHHHH-------------------HHcCCCCcccCCCCCCHHHHHHh
Confidence 889999999999999999999998777 33466789999999999998754
No 51
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=1.2e-30 Score=230.69 Aligned_cols=170 Identities=13% Similarity=0.070 Sum_probs=151.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHH
Q 037168 28 DDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLR 107 (466)
Q Consensus 28 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~ 107 (466)
+.||||.|+..|+.++++.|++.++ ..++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..|+||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~----~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 75 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGD----NLVNKPDERGFTPLIWASAFGEI-ETVRFLLEW-GADPHILAKERESALSL 75 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCS----GGGGCCCTTSCCHHHHHHHTTCH-HHHHHHHHH-TCCTTCCCTTCCCHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCc----ccccCCCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCchhhcccCCCHHHH
Confidence 5789999999999999999999643 34788999999999999999996 999999998 67899999999999999
Q ss_pred HHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHH
Q 037168 108 AARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIK 187 (466)
Q Consensus 108 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~ 187 (466)
|+..|+.+++++|++. +.+++.+|.+|+|||| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.
T Consensus 76 A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~ 144 (172)
T 3v30_A 76 ASTGGYTDIVGLLLER-------DVDINIYDWNGGTPLL---YAVRGNHVKCVEALLA-RGADLTTEADSGYTPMDLAVA 144 (172)
T ss_dssp HHHTTCHHHHHHHHTT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHCCCHHHHHHHHHc-------CCCCCCCCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHH
Confidence 9999999999999998 6788899999999999 7778899999999998 899999999999999999999
Q ss_pred cCChhHHHHHHhcCcccccccccccCCCCCc
Q 037168 188 YRQLEIFERVVQMEIPLRRLVRKIDYNGNTI 218 (466)
Q Consensus 188 ~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~Tp 218 (466)
+|+.+++++|++++++ +..++..|.||
T Consensus 145 ~~~~~~~~~L~~~~~~----~~~~~~~~~~p 171 (172)
T 3v30_A 145 LGYRKVQQVIENHILK----LFQSNLVPADP 171 (172)
T ss_dssp HTCHHHHHHHHHHHHH----HSCC-------
T ss_pred hCcHHHHHHHHHHHHH----HhcccCCCCCC
Confidence 9999999999999988 88888888887
No 52
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=6.4e-31 Score=252.27 Aligned_cols=200 Identities=16% Similarity=0.182 Sum_probs=174.9
Q ss_pred ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHH
Q 037168 3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPV 82 (466)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~ 82 (466)
.|+.+.+..++..+ .+++.. +|+||||+|+..|+.+++++|++ .+++++.+|..|.||||+|+..|+. ++
T Consensus 41 ~g~~~~v~~Ll~~g--~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~-----~ga~~~~~d~~g~t~L~~A~~~g~~-~~ 110 (285)
T 3kea_A 41 DNNVRLVCTLLNAG--ALKNLL--ENEFPLHQAATLEDTKIVKILLF-----SGLDDSQFDDKGNTALYYAVDSGNM-QT 110 (285)
T ss_dssp TTCHHHHHHHHHTT--GGGSCC--TTCCHHHHHTTSSSCHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH-HH
T ss_pred cCCHHHHHHHHhCC--CCCCCC--CCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCcCCCCCcHHHHHHHcCCH-HH
Confidence 46777777777664 556655 59999999999999999999999 5667889999999999999999996 99
Q ss_pred HHHHHHhCCCcccCcCCCC-ChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccC-CCCChhhHHHHHhhcCcHHHH
Q 037168 83 ADKVLRKAPGLLGMRNNNG-ETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRN-DKTNVLHIAILSLHFGCIEIV 160 (466)
Q Consensus 83 v~~Ll~~~~~~~~~~d~~G-~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~-~g~TpLh~A~~a~~~g~~~~v 160 (466)
+++|+++ +.+++.+|..| .||||+|+..|+.+++++|++.++ +. .+. .|.|||| .|+..|+.+++
T Consensus 111 v~~Ll~~-ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~-------~~--~~~~~g~t~L~---~A~~~g~~~~v 177 (285)
T 3kea_A 111 VKLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP-------ST--FDLAILLSCIH---ITIKNGHVDMM 177 (285)
T ss_dssp HHHHHHH-CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSC-------TT--CCCSTHHHHHH---HHHHTTCHHHH
T ss_pred HHHHHhc-CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCC-------cc--ccccCCccHHH---HHHHcChHHHH
Confidence 9999999 78899999999 899999999999999999999843 22 233 8999999 77789999999
Q ss_pred HHHHHHCCCcccccccCCChH-HHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCCh
Q 037168 161 KDILSVYPQAVEHIDDEGRNI-LHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGP 237 (466)
Q Consensus 161 ~~Ll~~~~~~~~~~d~~G~t~-Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~ 237 (466)
+.|++ .+++++.+|..|+|| ||+|+.+|+.+++++|+++|++ ++.+| +.|+..++.++++.|.+.
T Consensus 178 ~~Ll~-~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad----~~~~~-------~~a~~~~~~~iv~~Ll~~ 243 (285)
T 3kea_A 178 ILLLD-YMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDIN----IYSAN-------LENVLLDDAEIAKMIIEK 243 (285)
T ss_dssp HHHHH-HHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBC----STTTT-------GGGGTTTCHHHHHHHHHH
T ss_pred HHHHH-cCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCC----CCCCC-------hhhhhcCCHHHHHHHHHc
Confidence 99999 689999999999998 9999999999999999999998 77777 467778888888777433
No 53
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=1.5e-30 Score=234.44 Aligned_cols=163 Identities=20% Similarity=0.228 Sum_probs=133.5
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCC
Q 037168 21 LYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNN 100 (466)
Q Consensus 21 ~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~ 100 (466)
.+.+|..|+||||+|+..|+.+++++|++ .+.+++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~-----~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~ 100 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVE-----NFDKLEDKDIEGSTALIWAVKNNRL-GIAEKLLSK-GSNVNTKDFS 100 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHH-----HHCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHH-TCCTTCCCTT
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHH-----hccccccccccCccHHHHHHHcCCH-HHHHHHHHC-CCCCCCCCCC
Confidence 56678888888888888888888888888 4556777888888888888888885 888888887 5668888888
Q ss_pred CChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCCh
Q 037168 101 GETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRN 180 (466)
Q Consensus 101 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t 180 (466)
|+||||+|+..|+.+++++|++. +.+++.+|.+|+|||| .|+..|+.++++.|++ .+.+++.+|..|+|
T Consensus 101 g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t 169 (192)
T 2rfm_A 101 GKTPLMWSIIFGYSEMSYFLLEH-------GANVNDRNLEGETPLI---VASKYGRSEIVKKLLE-LGADISARDLTGLT 169 (192)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHT-------TCCSSCCCTTCCCHHH---HHHHHTCHHHHHHHHH-TTCCTTCBCTTSCB
T ss_pred CCcHHHHHHHcCCHHHHHHHHHC-------CCCCCCCCCCCCCHHH---HHHHcCCHHHHHHHHH-CCCCCCCcCCCCCC
Confidence 88888888888888888888887 5677778888888888 6667788888888887 68888888888888
Q ss_pred HHHHHHHcCChhHHHHHHhcC
Q 037168 181 ILHVAIKYRQLEIFERVVQME 201 (466)
Q Consensus 181 ~Lh~A~~~~~~~iv~~Ll~~g 201 (466)
|||+|+.+|+.+++++|+++|
T Consensus 170 ~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 170 AEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHhCcHHHHHHHHhcc
Confidence 888888888888888888764
No 54
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=3.4e-31 Score=252.99 Aligned_cols=191 Identities=17% Similarity=0.184 Sum_probs=173.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChH
Q 037168 25 TIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETA 104 (466)
Q Consensus 25 ~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tp 104 (466)
+..+.+++|.|+..|+.+.++.+++.+. ...++.+|.+|+||||+|+..|+. ++++.|++.+..+++.+|..|+||
T Consensus 73 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~---~~~~n~~d~~g~T~Lh~A~~~g~~-~~v~~Ll~~g~~~~~~~~~~g~tp 148 (276)
T 4hbd_A 73 RLACRSDAHPELVRRHLVTFRAMSARLL---DYVVNIADSNGNTALHYSVSHANF-PVVQQLLDSGVCKVDKQNRAGYSP 148 (276)
T ss_dssp HHHHSTTCCHHHHHHHHHHHHHHCHHHH---HHHHTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTSCCCTTCCCTTSCCH
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHH---hhcCcCCCCCCCCHHHHHHHCCCH-HHHHHHHHCCCCcCCCCCCCCCCH
Confidence 3346789999999999999999998532 235899999999999999999997 999999999666899999999999
Q ss_pred HHHHH-----HcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCC
Q 037168 105 LLRAA-----RYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGR 179 (466)
Q Consensus 105 Lh~Aa-----~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~ 179 (466)
||+|+ ..++.+++++|++. +.+.+..|..|+|||| .|+..|+.++++.|++ .+++++.+|..|+
T Consensus 149 L~~a~~~~~~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~tpLh---~A~~~g~~~~v~~Ll~-~gad~n~~d~~G~ 217 (276)
T 4hbd_A 149 IMLTALATLKTQDDIETVLQLFRL-------GNINAKASQAGQTALM---LAVSHGRVDVVKALLA-CEADVNVQDDDGS 217 (276)
T ss_dssp HHHGGGCCCCSHHHHHHHHHHHHH-------SCTTCCCTTTCCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSC
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHc-------CCCccccCCCCCCHHH---HHHHcCCHHHHHHHHh-CCCCCCCCCCCCC
Confidence 99999 66899999999998 5567778889999999 7778999999999999 8999999999999
Q ss_pred hHHHHHHHcCChhHHHHHHh-cCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168 180 NILHVAIKYRQLEIFERVVQ-MEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM 234 (466)
Q Consensus 180 t~Lh~A~~~~~~~iv~~Ll~-~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l 234 (466)
||||+|+.+|+.+++++|++ .|++ ++.+|.+|+||||+|++.|+.++++.|
T Consensus 218 TpLh~A~~~g~~~iv~~Ll~~~gad----~~~~d~~g~TpL~~A~~~g~~~iv~~L 269 (276)
T 4hbd_A 218 TALMCACEHGHKEIAGLLLAVPSCD----ISLTDRDGSTALMVALDAGQSEIASML 269 (276)
T ss_dssp CHHHHHHHHTCHHHHHHHHTSTTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHhcCCCC----CcCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999999 8988 899999999999999999999998666
No 55
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=2.5e-32 Score=253.57 Aligned_cols=201 Identities=15% Similarity=0.091 Sum_probs=168.4
Q ss_pred HHHHHhCCCc-cccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHH
Q 037168 10 IELCRKVPDH-ALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLR 88 (466)
Q Consensus 10 ~~ll~~~~~~-~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~ 88 (466)
+.+++++.+. ..+..+.+|.||||.|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+. +++++|++
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-----g~~~~~~d~~g~tpLh~A~~~g~~-~~v~~Ll~ 75 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKE-----MNDPSQPNEEGITALHNAICGANY-SIVDFLIT 75 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHH-----SSCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHH
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhc-----CCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHH
Confidence 4455555322 2345677788999999999999999999994 556888999999999999999996 99999999
Q ss_pred hCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCccccccc-CCCCChhhHHHHH--hhcCcHHHHHHHHH
Q 037168 89 KAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR-NDKTNVLHIAILS--LHFGCIEIVKDILS 165 (466)
Q Consensus 89 ~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d-~~g~TpLh~A~~a--~~~g~~~~v~~Ll~ 165 (466)
. +.+++.+|..|+||||+|+..|+.+++++|++. +.+++.++ .+|+|||| .| +..|+.+++++|++
T Consensus 76 ~-ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-------ga~~~~~~~~~g~tpL~---~A~a~~~~~~~~v~~Ll~ 144 (229)
T 2vge_A 76 A-GANVNSPDSHGWTPLHCAASCNDTVICMALVQH-------GAAIFATTLSDGATAFE---KCDPYREGYADCATYLAD 144 (229)
T ss_dssp T-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-------TCCTTCCCSSTTCCTGG---GCCTTSTTHHHHHHHHHH
T ss_pred C-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCcccccCCCCCCHHH---HHHHHhcChHHHHHHHHH
Confidence 8 788999999999999999999999999999998 66788876 69999999 66 89999999999999
Q ss_pred HCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhc
Q 037168 166 VYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEK 233 (466)
Q Consensus 166 ~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~ 233 (466)
.+++++.+|..|.|++|.++..+. .++|++.|++ ..++.+|.+|+||||+|++.|+.++++.
T Consensus 145 -~ga~~~~~~~~~~~~l~~~~~~~~---~~~ll~~ga~--~~~~~~d~~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 145 -VEQSMGLMNSGAVYALWDYSAEFG---DELSFREGES--VTVLRRDGPEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp -HHHHTTTSGGGEEEESSCBCCSST---TBCCBCTTCE--EEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred -cCCCcccccCCchHHHHHHhhccc---cccCcccccc--ccccccCCCcccHHHHHHHcCCcceeeh
Confidence 788999999999999997665543 3567888876 2378899999999999999999998854
No 56
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=3.6e-30 Score=231.91 Aligned_cols=161 Identities=22% Similarity=0.177 Sum_probs=151.1
Q ss_pred hhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCccccc
Q 037168 57 DKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFL 136 (466)
Q Consensus 57 ~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~ 136 (466)
..++.+|..|+||||+|+..|+. ++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++. +.+++.
T Consensus 26 ~~~n~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~ 96 (192)
T 2rfm_A 26 FLRNYRDSYNRTPLMVACMLGME-NAIDKLVEN-FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSK-------GSNVNT 96 (192)
T ss_dssp HHHTCCCTTCCCHHHHHHHHTCG-GGHHHHHHH-HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-------TCCTTC
T ss_pred HHHhCcCCCCCCHHHHHHHcCCH-HHHHHHHHh-ccccccccccCccHHHHHHHcCCHHHHHHHHHC-------CCCCCC
Confidence 35678999999999999999997 999999998 677999999999999999999999999999998 667888
Q ss_pred ccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCC
Q 037168 137 HRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGN 216 (466)
Q Consensus 137 ~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~ 216 (466)
+|..|.|||| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|..|+
T Consensus 97 ~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~ 168 (192)
T 2rfm_A 97 KDFSGKTPLM---WSIIFGYSEMSYFLLE-HGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGAD----ISARDLTGL 168 (192)
T ss_dssp CCTTSCCHHH---HHHHHTCHHHHHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----TTCBCTTSC
T ss_pred CCCCCCcHHH---HHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCC
Confidence 9999999999 6778899999999998 8999999999999999999999999999999999998 899999999
Q ss_pred CchhhhhccCcchhhhcc
Q 037168 217 TIFHMAGIKRKDYVAEKM 234 (466)
Q Consensus 217 TpLHlAa~~~~~~~~~~l 234 (466)
||||+|+..++.++++.|
T Consensus 169 t~l~~A~~~~~~~~v~~L 186 (192)
T 2rfm_A 169 TAEASARIFGRQEVIKIF 186 (192)
T ss_dssp BHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHhCcHHHHHHH
Confidence 999999999999988666
No 57
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=4.6e-30 Score=224.37 Aligned_cols=160 Identities=19% Similarity=0.179 Sum_probs=145.4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHH
Q 037168 26 IHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETAL 105 (466)
Q Consensus 26 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpL 105 (466)
+...||||.|++.|+.++++.|++ .+.+++.+|..|+||||+|+. |+. +++++|++. +.+++.+|..|+|||
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~-----~~~~~~~~~~~g~t~L~~A~~-~~~-~~v~~Ll~~-g~~~~~~~~~g~t~L 74 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQ-----NNVNVNAQNGFGRTALQVMKL-GNP-EIARRLLLR-GANPDLKDRTGFAVI 74 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTT-----SCCCTTCCCTTSCCHHHHCCS-SCH-HHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHh-----CCCCccccCccCccHHHHHHc-CcH-HHHHHHHHc-CCCCCCCCCCCCCHH
Confidence 456899999999999999999998 456688899999999999998 886 999999998 778999999999999
Q ss_pred HHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHH
Q 037168 106 LRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVA 185 (466)
Q Consensus 106 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A 185 (466)
|+|+..|+.+++++|++. +.+++.+|.+|+|||| .|+..|+.++++.|++.....++.+|..|+||||+|
T Consensus 75 ~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A 144 (162)
T 1ihb_A 75 HDAARAGFLDTLQTLLEF-------QADVNIEDNEGNLPLH---LAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLA 144 (162)
T ss_dssp HHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHc-------CCCCCCcCCCCCCHHH---HHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHH
Confidence 999999999999999998 6788899999999999 777899999999999965555799999999999999
Q ss_pred HHcCChhHHHHHHhcCcc
Q 037168 186 IKYRQLEIFERVVQMEIP 203 (466)
Q Consensus 186 ~~~~~~~iv~~Ll~~g~~ 203 (466)
+.+|+.+++++|+++|++
T Consensus 145 ~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 145 RLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHTTCHHHHHHHHHTC--
T ss_pred HHcCCHHHHHHHHHhCCC
Confidence 999999999999999975
No 58
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=9.8e-30 Score=223.64 Aligned_cols=159 Identities=15% Similarity=0.097 Sum_probs=148.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHH
Q 037168 27 HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALL 106 (466)
Q Consensus 27 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh 106 (466)
+|.||||.|+..|+.++++.|++. +.+++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..|.||||
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~-----~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~ 74 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQ-----ENVINHTDEEGFTPLMWAAAHGQI-AVVEFLLQN-GADPQLLGKGRESALS 74 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHH-----SSCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTCCCHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHc-----CCCcCCCCCCCCCHHHHHHHCCCH-HHHHHHHHc-CCCCCCcCCCCCcHHH
Confidence 589999999999999999999995 456888999999999999999996 999999998 7789999999999999
Q ss_pred HHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHH
Q 037168 107 RAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAI 186 (466)
Q Consensus 107 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~ 186 (466)
+|+..|+.+++++|++. +.+++.+|.+|.|||| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+
T Consensus 75 ~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~ 143 (167)
T 3v31_A 75 LACSKGYTDIVKMLLDC-------GVDVNEYDWNGGTPLL---YAVHGNHVKCVKMLLE-SGADPTIETDSGYNSMDLAV 143 (167)
T ss_dssp HHHHHTCHHHHHHHHHH-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHC-------CCCCCcCCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHH
Confidence 99999999999999998 6788889999999999 7778899999999998 89999999999999999999
Q ss_pred HcCChhHHHHHHhcCcc
Q 037168 187 KYRQLEIFERVVQMEIP 203 (466)
Q Consensus 187 ~~~~~~iv~~Ll~~g~~ 203 (466)
.+|+.+++++|++++.+
T Consensus 144 ~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 144 ALGYRSVQQVIESHLLK 160 (167)
T ss_dssp HHTCHHHHHHHHHHHHH
T ss_pred HcCcHHHHHHHHHHHHH
Confidence 99999999999998765
No 59
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=3.6e-30 Score=242.59 Aligned_cols=182 Identities=19% Similarity=0.173 Sum_probs=156.8
Q ss_pred ccchHHH---HHHHHhCCCccccc----cCCCCCcHHHHHHHc---CCHHHHHHHHHhCCCCchhhhh-----------c
Q 037168 3 KQDEQKV---IELCRKVPDHALYV----FTIHDDTVLHMATYT---KKSDLVIKLLDELPDQSLDKMT-----------R 61 (466)
Q Consensus 3 ~g~~~~v---~~ll~~~~~~~~~~----~~~~g~T~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~-----------~ 61 (466)
.|+.+.| .+++.+. +.+++. .|.+|+||||+|+.. |+.+++++|++. +++++ .
T Consensus 12 ~g~~~~v~~ll~~l~~~-g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~-----g~~~~~~~~~~~~~~~~ 85 (256)
T 2etb_A 12 RGVPEELTGLLEYLRWN-SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQI-----DKDSGNPKPLVNAQCTD 85 (256)
T ss_dssp HTCGGGGTTHHHHHHHH-TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHH-----HHHTTCSSCGGGCCCCS
T ss_pred cCCHHHHHHHHHHHHHc-CCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhc-----CCcccchhhhccccccc
Confidence 4666643 3444344 366776 899999999999999 999999999995 34433 2
Q ss_pred cCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCC-------------CChHHHHHHHcCCHHHHHHHHh---ccC
Q 037168 62 QNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNN-------------GETALLRAARYGKVDIFNFLAG---KIS 125 (466)
Q Consensus 62 ~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~-------------G~tpLh~Aa~~g~~~~v~~Ll~---~~~ 125 (466)
+|..|.||||+|+..|+. +++++|++. +.+++.+|.. |+||||+|+..|+.+++++|++ .
T Consensus 86 ~d~~g~t~L~~A~~~g~~-~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~-- 161 (256)
T 2etb_A 86 EFYQGHSALHIAIEKRSL-QCVKLLVEN-GADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ-- 161 (256)
T ss_dssp TTTTTCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC--
T ss_pred ccccCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc--
Confidence 447899999999999996 999999998 7789999887 9999999999999999999999 6
Q ss_pred CCCCCCcccccccCCCCChhhHHHHHhh--cCcHH-------HHHHHHHHCCCcc-------cccccCCChHHHHHHHcC
Q 037168 126 GYDHATRLPFLHRNDKTNVLHIAILSLH--FGCIE-------IVKDILSVYPQAV-------EHIDDEGRNILHVAIKYR 189 (466)
Q Consensus 126 ~~~~~~~~~~~~d~~g~TpLh~A~~a~~--~g~~~-------~v~~Ll~~~~~~~-------~~~d~~G~t~Lh~A~~~~ 189 (466)
+++++.+|.+|+||||+ |+. .++.+ +++.|++ .++++ +.+|..|+||||+|+.+|
T Consensus 162 -----ga~~n~~d~~g~TpLh~---A~~~~~~~~~~~~~~~~iv~~Ll~-~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g 232 (256)
T 2etb_A 162 -----PASLEATDSLGNTVLHA---LVMIADNSPENSALVIHMYDGLLQ-MGARLCPTVQLEEISNHQGLTPLKLAAKEG 232 (256)
T ss_dssp -----CCCTTCCCTTSCCHHHH---HHHHCCSCHHHHHHHHHHHHHHHH-HHHHHSTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred -----CCCcCccCCCCCCHHHH---HHHcccCCchhhHHHHHHHHHHHH-cCCCcccccccccccCCCCCCHHHHHHHhC
Confidence 67899999999999995 445 78888 9999998 68888 899999999999999999
Q ss_pred ChhHHHHHHhcCcc
Q 037168 190 QLEIFERVVQMEIP 203 (466)
Q Consensus 190 ~~~iv~~Ll~~g~~ 203 (466)
+.+++++|+++|.+
T Consensus 233 ~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 233 KIEIFRHILQREFS 246 (256)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCCCC
Confidence 99999999999876
No 60
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=2e-30 Score=247.70 Aligned_cols=183 Identities=22% Similarity=0.244 Sum_probs=163.0
Q ss_pred ccchHHHHHHHHhCCCccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHH-----HcC
Q 037168 3 KQDEQKVIELCRKVPDHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETA-----TSN 77 (466)
Q Consensus 3 ~g~~~~v~~ll~~~~~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa-----~~g 77 (466)
.|+.+.+..++....+..++..|.+|+||||+||..|+.++++.|++.++ .+++..|..|.||||+|+ ..+
T Consensus 86 ~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~----~~~~~~~~~g~tpL~~a~~~~~~~~~ 161 (276)
T 4hbd_A 86 RRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGV----CKVDKQNRAGYSPIMLTALATLKTQD 161 (276)
T ss_dssp HHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSC----CCTTCCCTTSCCHHHHGGGCCCCSHH
T ss_pred HHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC----CcCCCCCCCCCCHHHHHHHHHhhhhh
Confidence 45566666666665444588899999999999999999999999999543 268899999999999999 556
Q ss_pred CcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcH
Q 037168 78 HALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCI 157 (466)
Q Consensus 78 ~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~ 157 (466)
+. ++++.|++. +...+..|..|+||||+|+..|+.+++++|++. +++++.+|.+|+|||| .|+..|+.
T Consensus 162 ~~-~~v~~Ll~~-g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-------gad~n~~d~~G~TpLh---~A~~~g~~ 229 (276)
T 4hbd_A 162 DI-ETVLQLFRL-GNINAKASQAGQTALMLAVSHGRVDVVKALLAC-------EADVNVQDDDGSTALM---CACEHGHK 229 (276)
T ss_dssp HH-HHHHHHHHH-SCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHHTCH
T ss_pred hH-HHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHhC-------CCCCCCCCCCCCCHHH---HHHHCCCH
Confidence 65 999999998 677888999999999999999999999999998 7789999999999999 77788999
Q ss_pred HHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcC
Q 037168 158 EIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQME 201 (466)
Q Consensus 158 ~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g 201 (466)
++++.|++..+++++.+|..|+||||+|+.+|+.+++++|++++
T Consensus 230 ~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 230 EIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 99999998789999999999999999999999999999999875
No 61
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=2.4e-30 Score=246.25 Aligned_cols=201 Identities=17% Similarity=0.145 Sum_probs=155.7
Q ss_pred ccchHHHHHHHHhC--CCcccc----ccCCCCCcHHHHHHHc---CCHHHHHHHHHhCCCCc--hhhhhc----cCCCCC
Q 037168 3 KQDEQKVIELCRKV--PDHALY----VFTIHDDTVLHMATYT---KKSDLVIKLLDELPDQS--LDKMTR----QNKAGN 67 (466)
Q Consensus 3 ~g~~~~v~~ll~~~--~~~~~~----~~~~~g~T~Lh~A~~~---g~~~~v~~Ll~~~~~~~--~~~~~~----~d~~G~ 67 (466)
.|+.+.|..+++.. .+..++ ..|..|+||||+|+.. |+.+++++|++.+.+.. ...++. .|..|.
T Consensus 23 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~ 102 (273)
T 2pnn_A 23 QSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQ 102 (273)
T ss_dssp TTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTC
T ss_pred cCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCC
Confidence 56777776666632 123333 4588999999999987 99999999999543211 011333 677999
Q ss_pred hHHHHHHHcCCcHHHHHHHHHhCCCcccCcCC--------------CCChHHHHHHHcCCHHHHHHHHh---ccCCCCCC
Q 037168 68 TILHETATSNHALPVADKVLRKAPGLLGMRNN--------------NGETALLRAARYGKVDIFNFLAG---KISGYDHA 130 (466)
Q Consensus 68 TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~--------------~G~tpLh~Aa~~g~~~~v~~Ll~---~~~~~~~~ 130 (466)
||||+|+..|+. +++++|++. +.+++.+|. .|+||||+|+..|+.+++++|++ .
T Consensus 103 tpL~~A~~~g~~-~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~------- 173 (273)
T 2pnn_A 103 TALHIAIERRNM-TLVTLLVEN-GADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQ------- 173 (273)
T ss_dssp CHHHHHHHTTCH-HHHHHHHHT-TCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSC-------
T ss_pred CHHHHHHHcCCH-HHHHHHHHC-CCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccC-------
Confidence 999999999996 999999998 778999887 79999999999999999999999 6
Q ss_pred CcccccccCCCCChhhHHHHHhhcCc---------HHHHHHHHHHCCCccc-------ccccCCChHHHHHHHcCChhHH
Q 037168 131 TRLPFLHRNDKTNVLHIAILSLHFGC---------IEIVKDILSVYPQAVE-------HIDDEGRNILHVAIKYRQLEIF 194 (466)
Q Consensus 131 ~~~~~~~d~~g~TpLh~A~~a~~~g~---------~~~v~~Ll~~~~~~~~-------~~d~~G~t~Lh~A~~~~~~~iv 194 (466)
+.+++.+|.+|+|||| .|+..|+ .++++.|++ .+++++ .+|..|+||||+|+.+|+.+++
T Consensus 174 gad~~~~d~~g~tpLh---~A~~~~~~~~~~~~~~~~~v~~Ll~-~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv 249 (273)
T 2pnn_A 174 PADISARDSVGNTVLH---ALVEVADNTVDNTKFVTSMYNEILI-LGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVL 249 (273)
T ss_dssp CCCTTCCCTTSCCHHH---HHHHHCCSCHHHHHHHHHHHHHHHH-HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCCceeeCCCCCcHHH---HHHHccCcchhHHHHHHHHHHHHHH-hhhhcccccccccccCCCCCCHHHHHHHhChHHHH
Confidence 6789999999999999 5556666 799999998 677776 5899999999999999999999
Q ss_pred HHHHhcCc-ccccccccccCCCCCchh
Q 037168 195 ERVVQMEI-PLRRLVRKIDYNGNTIFH 220 (466)
Q Consensus 195 ~~Ll~~g~-~~~~~~~~~d~~G~TpLH 220 (466)
++|+++|+ | .......+.+|-|
T Consensus 250 ~~Ll~~ga~d----p~~~~~~~~~~~~ 272 (273)
T 2pnn_A 250 AYILQREIHE----PECRHAAAHHHHH 272 (273)
T ss_dssp HHHHHHHTC------------------
T ss_pred HHHHHCCCCC----chhhhhhhhhccC
Confidence 99999998 4 5666666665543
No 62
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=2.7e-29 Score=221.54 Aligned_cols=161 Identities=21% Similarity=0.253 Sum_probs=144.2
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCC
Q 037168 23 VFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGE 102 (466)
Q Consensus 23 ~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~ 102 (466)
.....+.|+||.||+.|+.+++++|++ ++.+++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..|+
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~ 81 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILMA-----NGADVNAEDASGWTPLHLAAFNGHL-EIVEVLLKN-GADVNAVDHAGM 81 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSC
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCccCCCCC
Confidence 345667899999999999999999999 4566888999999999999999996 999999988 778999999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHH
Q 037168 103 TALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNIL 182 (466)
Q Consensus 103 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~L 182 (466)
||||+|+..|+.+++++|++. +.+++.+|.+|+|||| .|+..|+.++++.|++ .+.+++.+|..|+|||
T Consensus 82 t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l 150 (169)
T 2y1l_E 82 TPLRLAALFGHLEIVEVLLKN-------GADVNANDMEGHTPLH---LAAMFGHLEIVEVLLK-NGADVNAQDKFGKTAF 150 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHH
T ss_pred CHHHHHHHcCCHHHHHHHHHc-------CCCCCCCCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHH
Confidence 999999999999999999998 6678889999999999 7778899999999998 7899999999999999
Q ss_pred HHHHHcCChhHHHHHHhcC
Q 037168 183 HVAIKYRQLEIFERVVQME 201 (466)
Q Consensus 183 h~A~~~~~~~iv~~Ll~~g 201 (466)
|+|+.+|+.+++++|++.|
T Consensus 151 ~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 151 DISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHhCCHHHHHHHHHcC
Confidence 9999999999999999875
No 63
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=6.8e-30 Score=225.77 Aligned_cols=153 Identities=19% Similarity=0.233 Sum_probs=143.5
Q ss_pred CChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChh
Q 037168 66 GNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVL 145 (466)
Q Consensus 66 G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpL 145 (466)
+.||||.|+..|+. ++++.|++.++..++.+|..|+||||+|+..|+.+++++|++. +.+++.+|.+|+|||
T Consensus 2 ~~~~L~~A~~~g~~-~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L 73 (172)
T 3v30_A 2 DSLSIHQLAAQGEL-DQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEW-------GADPHILAKERESAL 73 (172)
T ss_dssp --CCHHHHHHTTCH-HHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH-------TCCTTCCCTTCCCHH
T ss_pred chhhHHHHHHcCCH-HHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCchhhcccCCCHH
Confidence 56899999999997 9999999997777999999999999999999999999999998 678889999999999
Q ss_pred hHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhcc
Q 037168 146 HIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIK 225 (466)
Q Consensus 146 h~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~ 225 (466)
| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..
T Consensus 74 ~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~ 145 (172)
T 3v30_A 74 S---LASTGGYTDIVGLLLE-RDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGAD----LTTEADSGYTPMDLAVAL 145 (172)
T ss_dssp H---HHHHTTCHHHHHHHHT-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHH
T ss_pred H---HHHHCCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccccCCCCCCHHHHHHHh
Confidence 9 7778999999999998 7999999999999999999999999999999999998 899999999999999999
Q ss_pred Ccchhhhcc
Q 037168 226 RKDYVAEKM 234 (466)
Q Consensus 226 ~~~~~~~~l 234 (466)
++.++++.|
T Consensus 146 ~~~~~~~~L 154 (172)
T 3v30_A 146 GYRKVQQVI 154 (172)
T ss_dssp TCHHHHHHH
T ss_pred CcHHHHHHH
Confidence 999998776
No 64
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=1e-29 Score=239.94 Aligned_cols=189 Identities=17% Similarity=0.147 Sum_probs=155.0
Q ss_pred ccchHHHHHHHH---hCCCcccccc----CCCCCcHHHHHH---HcCCHHHHHHHHHhCCCCch------hhhhccCCCC
Q 037168 3 KQDEQKVIELCR---KVPDHALYVF----TIHDDTVLHMAT---YTKKSDLVIKLLDELPDQSL------DKMTRQNKAG 66 (466)
Q Consensus 3 ~g~~~~v~~ll~---~~~~~~~~~~----~~~g~T~Lh~A~---~~g~~~~v~~Ll~~~~~~~~------~~~~~~d~~G 66 (466)
+|+.+.+..++. +. +.+++.. |.+|+||||+|+ +.|+.+++++|++.+.+... ..++..|..|
T Consensus 15 ~g~~~~v~~ll~~l~~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g 93 (260)
T 3jxi_A 15 RGSPDGLEGLLSFLLTH-KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRG 93 (260)
T ss_dssp HTCGGGGTTHHHHHHHH-TCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEES
T ss_pred hCCHHHHHHHHHHHHhc-CCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCC
Confidence 577776555555 33 2444433 377999999999 77999999999996432110 2244556699
Q ss_pred ChHHHHHHHcCCcHHHHHHHHHhCCCcccCcC--------------CCCChHHHHHHHcCCHHHHHHHHhcc-CCCCCCC
Q 037168 67 NTILHETATSNHALPVADKVLRKAPGLLGMRN--------------NNGETALLRAARYGKVDIFNFLAGKI-SGYDHAT 131 (466)
Q Consensus 67 ~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d--------------~~G~tpLh~Aa~~g~~~~v~~Ll~~~-~~~~~~~ 131 (466)
+||||+|+..|+. +++++|++. +++++.+| ..|+||||+|+..|+.+++++|++.+ . +
T Consensus 94 ~t~L~~A~~~g~~-~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~-----g 166 (260)
T 3jxi_A 94 QTALHIAIERRCK-HYVELLVEK-GADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK-----Q 166 (260)
T ss_dssp BCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSC-----C
T ss_pred CCHHHHHHHcCCH-HHHHHHHhC-CCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc-----C
Confidence 9999999999996 999999998 78899988 68999999999999999999999921 1 6
Q ss_pred cccccccCCCCChhhHHHHHhhcCc---------HHHHHHHHHHCCCcc-------cccccCCChHHHHHHHcCChhHHH
Q 037168 132 RLPFLHRNDKTNVLHIAILSLHFGC---------IEIVKDILSVYPQAV-------EHIDDEGRNILHVAIKYRQLEIFE 195 (466)
Q Consensus 132 ~~~~~~d~~g~TpLh~A~~a~~~g~---------~~~v~~Ll~~~~~~~-------~~~d~~G~t~Lh~A~~~~~~~iv~ 195 (466)
.+++.+|.+|+||||+ |+..|+ .++++.|++ .++++ +.+|..|+||||+|+.+|+.++++
T Consensus 167 a~~~~~d~~g~TpLh~---A~~~~~~~~~~~~~~~~~v~~Ll~-~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~ 242 (260)
T 3jxi_A 167 ADLRRQDSRGNTVLHA---LVAIADNTRENTKFVTKMYDLLLI-KCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQ 242 (260)
T ss_dssp CCTTCCCTTSCCHHHH---HHHHCCSSHHHHHHHHHHHHHHHH-HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCCcccCCCCCcHHHH---HHHhccCchhHHHHHHHHHHHHHH-hCcccccccchhhcccCCCCCHHHHHHHcCCHHHHH
Confidence 7899999999999994 555455 799999998 67777 779999999999999999999999
Q ss_pred HHHhcCcc
Q 037168 196 RVVQMEIP 203 (466)
Q Consensus 196 ~Ll~~g~~ 203 (466)
+|+++|++
T Consensus 243 ~Ll~~g~~ 250 (260)
T 3jxi_A 243 HIIRREIA 250 (260)
T ss_dssp HHHHHHHH
T ss_pred HHHHhCCC
Confidence 99999876
No 65
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=3.7e-29 Score=222.74 Aligned_cols=169 Identities=17% Similarity=0.138 Sum_probs=150.3
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHH
Q 037168 26 IHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETAL 105 (466)
Q Consensus 26 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpL 105 (466)
.++.++||.||+.|+.++++.|++.. +.+++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..|+|||
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~----~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t~L 76 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNT----ENDLNQGDDHGFSPLHWACREGRS-AVVEMLIMR-GARINVMNRGDDTPL 76 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCT----TSCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTCCCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcC----cccccccCCCCCCHHHHHHHcCcH-HHHHHHHHc-CCCCCCcCCCCCCHH
Confidence 46789999999999999999999963 446888999999999999999996 999999988 788999999999999
Q ss_pred HHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHH
Q 037168 106 LRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVA 185 (466)
Q Consensus 106 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A 185 (466)
|+|+..|+.+++++|++. +.+++.+|.+|+|||| .|+..|+.++++.|++ .+++++.+|..|+||||+|
T Consensus 77 ~~A~~~~~~~~v~~Ll~~-------g~~~~~~d~~g~t~L~---~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A 145 (179)
T 3f6q_A 77 HLAASHGHRDIVQKLLQY-------KADINAVNEHGNVPLH---YACFWGQDQVAEDLVA-NGALVSICNKYGEMPVDKA 145 (179)
T ss_dssp HHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCSSBCCTTSCCGGGGS
T ss_pred HHHHHcCCHHHHHHHHHc-------CCCCCccCCCCCCHHH---HHHHcCCHHHHHHHHH-CCCCcchhccCCCCcHHHH
Confidence 999999999999999998 6788899999999999 7778899999999998 8999999999999999999
Q ss_pred HHcCChhHHHHHHhcCcccccccccccCCC
Q 037168 186 IKYRQLEIFERVVQMEIPLRRLVRKIDYNG 215 (466)
Q Consensus 186 ~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G 215 (466)
+..++.+++++|+++|++ ++..+.++
T Consensus 146 ~~~~~~~~~~~L~~~g~~----~~~~~~~~ 171 (179)
T 3f6q_A 146 KAPLRELLRERAEKMGQN----LNRIPYKD 171 (179)
T ss_dssp CHHHHHHHHHHHHHTTCC----CSCBCCCC
T ss_pred HHHHHHHHHHHHHHhhcC----cccCCccc
Confidence 999999999999999988 66555444
No 66
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=2.9e-29 Score=220.61 Aligned_cols=153 Identities=18% Similarity=0.209 Sum_probs=144.4
Q ss_pred CCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCCh
Q 037168 65 AGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNV 144 (466)
Q Consensus 65 ~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~Tp 144 (466)
.|.||||.|+..|+. ++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++. +.+++.+|..|.||
T Consensus 2 ~~~t~L~~A~~~g~~-~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~ 72 (167)
T 3v31_A 2 ANSLSVHQLAAQGEM-LYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQN-------GADPQLLGKGRESA 72 (167)
T ss_dssp TTCCCHHHHHHTTCH-HHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTCCCH
T ss_pred CCcchHHHHHHCCCH-HHHHHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHc-------CCCCCCcCCCCCcH
Confidence 589999999999997 999999999 677999999999999999999999999999998 66788899999999
Q ss_pred hhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhc
Q 037168 145 LHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGI 224 (466)
Q Consensus 145 Lh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~ 224 (466)
|| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+.
T Consensus 73 L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~l~~A~~ 144 (167)
T 3v31_A 73 LS---LACSKGYTDIVKMLLD-CGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD----PTIETDSGYNSMDLAVA 144 (167)
T ss_dssp HH---HHHHHTCHHHHHHHHH-HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHH
T ss_pred HH---HHHHcCCHHHHHHHHH-CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHH
Confidence 99 7778899999999999 7899999999999999999999999999999999998 89999999999999999
Q ss_pred cCcchhhhcc
Q 037168 225 KRKDYVAEKM 234 (466)
Q Consensus 225 ~~~~~~~~~l 234 (466)
.++.++++.|
T Consensus 145 ~~~~~~~~~L 154 (167)
T 3v31_A 145 LGYRSVQQVI 154 (167)
T ss_dssp HTCHHHHHHH
T ss_pred cCcHHHHHHH
Confidence 9999998776
No 67
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=5.1e-29 Score=218.60 Aligned_cols=155 Identities=18% Similarity=0.143 Sum_probs=94.8
Q ss_pred CCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCC
Q 037168 63 NKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKT 142 (466)
Q Consensus 63 d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~ 142 (466)
|.+|.||||.|++.|+. ++++.|++..+.+++..|..|+||||+|+..|+.+++++|++. +.+++.+|.+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~-~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~ 76 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDV-ETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQH-------GADVHAKDKGGL 76 (165)
T ss_dssp -CHHHHHHHHHHHHTCH-HHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSC
T ss_pred cchhhHHHHHHHHhCCH-HHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhc-------CCCCCccCCCCC
Confidence 45566666666666664 6666666655555555666666666666666666666666665 445555666666
Q ss_pred ChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhh
Q 037168 143 NVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMA 222 (466)
Q Consensus 143 TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlA 222 (466)
|||| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|
T Consensus 77 t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~a 148 (165)
T 3twr_A 77 VPLH---NACSYGHYEVAELLVK-HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD----PTKKNRDGNTPLDLV 148 (165)
T ss_dssp CHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCTGGGS
T ss_pred CHHH---HHHHcCcHHHHHHHHh-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CcccCCCCCChhHhH
Confidence 6666 4445566666666665 5666666666666666666666666666666666665 566666666666665
Q ss_pred hccCcchhhhcc
Q 037168 223 GIKRKDYVAEKM 234 (466)
Q Consensus 223 a~~~~~~~~~~l 234 (466)
.+ ++.+++++|
T Consensus 149 ~~-~~~~i~~~L 159 (165)
T 3twr_A 149 KD-GDTDIQDLL 159 (165)
T ss_dssp CT-TCHHHHHHH
T ss_pred hc-CChHHHHHH
Confidence 55 455555444
No 68
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=3.6e-29 Score=219.54 Aligned_cols=161 Identities=19% Similarity=0.130 Sum_probs=145.9
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCCh
Q 037168 24 FTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGET 103 (466)
Q Consensus 24 ~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~t 103 (466)
.|.+|+||||.|++.|+.++++.|++.. +.+++..|..|.||||+|+..|+. +++++|++. +.+++.+|.+|+|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~----~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t 77 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQ----SVNCRDIEGRQSTPLHFAAGYNRV-SVVEYLLQH-GADVHAKDKGGLV 77 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTT----TTTCCCTTTTCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCC
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcC----CCCccccccCCCCHHHHHHHcChH-HHHHHHHhc-CCCCCccCCCCCC
Confidence 4677899999999999999999999863 345777889999999999999996 999999998 7789999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHH
Q 037168 104 ALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILH 183 (466)
Q Consensus 104 pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh 183 (466)
|||+|+..|+.+++++|++. +.+++.+|.+|+|||| .|+..|+.++++.|++ .+.+++.+|..|+||||
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~ 146 (165)
T 3twr_A 78 PLHNACSYGHYEVAELLVKH-------GAVVNVADLWKFTPLH---EAAAKGKYEICKLLLQ-HGADPTKKNRDGNTPLD 146 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTCCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCTGG
T ss_pred HHHHHHHcCcHHHHHHHHhC-------CCCCCCcCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCCcccCCCCCChhH
Confidence 99999999999999999998 6788899999999999 7778999999999998 79999999999999999
Q ss_pred HHHHcCChhHHHHHHhcCc
Q 037168 184 VAIKYRQLEIFERVVQMEI 202 (466)
Q Consensus 184 ~A~~~~~~~iv~~Ll~~g~ 202 (466)
+|+. ++.+++++|+++|+
T Consensus 147 ~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 147 LVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp GSCT-TCHHHHHHHHTC--
T ss_pred hHhc-CChHHHHHHhhccc
Confidence 9877 89999999999875
No 69
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=2.3e-29 Score=235.06 Aligned_cols=184 Identities=13% Similarity=0.060 Sum_probs=133.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChH
Q 037168 25 TIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETA 104 (466)
Q Consensus 25 ~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tp 104 (466)
+..|.||||.|++.|+.+.++.|+++ +.+++. +..|.||||.|+..|+. ++++.|++. +.+++.+|..|+||
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~-----g~~~~~-~~~~~t~L~~A~~~g~~-~~v~~Ll~~-g~~~~~~d~~g~t~ 73 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAH-----GMRVKF-NPLPLALLLDSSLEGEF-DLVQRIIYE-VDDPSLPNDEGITA 73 (239)
T ss_dssp -----------------------------------------CHHHHHHHHHHTCH-HHHHHHTST-TSSCCCCCTTSCCH
T ss_pred CccccccCchhhhhhhHHHHHHHhcc-----CCCccc-CchhhHHHHHHHHcCCH-HHHHHHHHc-CCCCCCcCCCCCCH
Confidence 45799999999999999999999994 455554 47899999999999997 999999988 66899999999999
Q ss_pred HHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCC-hHHH
Q 037168 105 LLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGR-NILH 183 (466)
Q Consensus 105 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~-t~Lh 183 (466)
||+|+..|+.+++++|+++ +.+++.+|.+|+|||| .|+..|+.++++.|++ .+++++.+|..|. ||||
T Consensus 74 L~~A~~~g~~~~v~~Ll~~-------ga~~~~~d~~g~tpL~---~A~~~~~~~~v~~Ll~-~ga~~~~~~~~~~~t~l~ 142 (239)
T 1ycs_B 74 LHNAVCAGHTEIVKFLVQF-------GVNVNAADSDGWTPLH---CAASCNNVQVCKFLVE-SGAAVFAMTYSDMQTAAD 142 (239)
T ss_dssp HHHHHHHTCHHHHHHHHHH-------TCCTTCCCTTCCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCSSSCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHc-------CCCCCccCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCcceecCCCCcchHH
Confidence 9999999999999999998 6788999999999999 7778999999999999 8999999998887 9999
Q ss_pred HH--HHcCChhHHHHHHhcCcccccc-----cccccCCCCCchhhhhccCc
Q 037168 184 VA--IKYRQLEIFERVVQMEIPLRRL-----VRKIDYNGNTIFHMAGIKRK 227 (466)
Q Consensus 184 ~A--~~~~~~~iv~~Ll~~g~~~~~~-----~~~~d~~G~TpLHlAa~~~~ 227 (466)
+| +.+|+.+++++|+++|++.... ....|..|.||+|++.+.|.
T Consensus 143 ~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 143 KCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 99 8889999999999998873211 22237889999999998775
No 70
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=2e-28 Score=212.19 Aligned_cols=151 Identities=20% Similarity=0.161 Sum_probs=125.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHH
Q 037168 28 DDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLR 107 (466)
Q Consensus 28 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~ 107 (466)
..||||.|++.|+.++++.|++.+++ ++ .|..|.||||+|+..|+. +++++|++. +.+++.+|..|+||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~-----~~-~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 73 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAP-----FT-TDWLGTSPLHLAAQYGHF-STTEVLLRA-GVSRDARTKVDRTPLHM 73 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCC-----CC-CCTTCCCHHHHHHHHTCH-HHHHHHHTT-TCCTTCCCTTCCCHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCC-----CC-cCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCCCCCCCCCHHHH
Confidence 45788999999999999999886543 23 577888999999888886 888888877 66788888888899999
Q ss_pred HHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHH
Q 037168 108 AARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIK 187 (466)
Q Consensus 108 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~ 187 (466)
|+..|+.+++++|++. +.+++.+|.+|+|||| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.
T Consensus 74 A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~ 142 (153)
T 1awc_B 74 AASEGHANIVEVLLKH-------GADVNAKDMLKMTALH---WATEHNHQEVVELLIK-YGADVHTQSKFCKTAFDISID 142 (153)
T ss_dssp HHHHTCHHHHHHHHTT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHcChHHHHHHHHHc-------CCCCCCCCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHH
Confidence 8888888888888887 5677788888888888 6667888888888888 688888888888888888888
Q ss_pred cCChhHHHHH
Q 037168 188 YRQLEIFERV 197 (466)
Q Consensus 188 ~~~~~iv~~L 197 (466)
+|+.+++++|
T Consensus 143 ~~~~~i~~~L 152 (153)
T 1awc_B 143 NGNEDLAEIL 152 (153)
T ss_dssp TTCHHHHHHH
T ss_pred cCCHHHHHHh
Confidence 8888888876
No 71
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=2e-28 Score=212.61 Aligned_cols=154 Identities=18% Similarity=0.187 Sum_probs=139.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHH
Q 037168 28 DDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLR 107 (466)
Q Consensus 28 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~ 107 (466)
+.||||.|++.|+.++++.|++.. +.+++..|..|.||||+ +..|+. ++++.|++. +.+++.+|..|+||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~----~~~~~~~~~~g~t~L~~-~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 74 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRE----LVHPDALNRFGKTALQV-MMFGST-AIALELLKQ-GASPNVQDTSGTSPVHD 74 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTT----CCCTTCCCTTSCCHHHH-SCTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhh----CcCccccCCCCCcHHHH-HHcCCH-HHHHHHHHC-CCCCCCcCCCCCCHHHH
Confidence 579999999999999999999951 23678889999999999 888986 999999988 77899999999999999
Q ss_pred HHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHH
Q 037168 108 AARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIK 187 (466)
Q Consensus 108 Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~ 187 (466)
|+..|+.+++++|++. +.+++.+|.+|+|||| .|+..|+.++++.|++ . .+++.+|..|+||||+|+.
T Consensus 75 A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~-~~~~~~~~~g~t~l~~A~~ 142 (156)
T 1bd8_A 75 AARTGFLDTLKVLVEH-------GADVNVPDGTGALPIH---LAVQEGHTAVVSFLAA-E-SDLHRRDARGLTPLELALQ 142 (156)
T ss_dssp HHHTTCHHHHHHHHHT-------TCCSCCCCTTSCCHHH---HHHHHTCHHHHHHHHT-T-SCTTCCCTTSCCHHHHHHH
T ss_pred HHHcCcHHHHHHHHHc-------CCCCCCcCCCCCcHHH---HHHHhChHHHHHHHHh-c-cCCCCcCCCCCCHHHHHHH
Confidence 9999999999999998 6788889999999999 6778899999999998 4 8899999999999999999
Q ss_pred cCChhHHHHHHhc
Q 037168 188 YRQLEIFERVVQM 200 (466)
Q Consensus 188 ~~~~~iv~~Ll~~ 200 (466)
+|+.+++++|+++
T Consensus 143 ~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 143 RGAQDLVDILQGH 155 (156)
T ss_dssp SCCHHHHHHHHTT
T ss_pred cCcHHHHHHHHhh
Confidence 9999999999874
No 72
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=2.3e-28 Score=217.55 Aligned_cols=155 Identities=18% Similarity=0.208 Sum_probs=143.5
Q ss_pred CCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCC
Q 037168 64 KAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTN 143 (466)
Q Consensus 64 ~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~T 143 (466)
.++.+|||.|+..|+. ++++.|++..+.+++.+|..|+||||+|+..|+.+++++|++. +.+++.+|.+|+|
T Consensus 3 ~~~~~~l~~A~~~g~~-~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t 74 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNA-VAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR-------GARINVMNRGDDT 74 (179)
T ss_dssp ----CCHHHHHHHTCH-HHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTCCC
T ss_pred HHHHHHHHHHHHcCCH-HHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHc-------CCCCCCcCCCCCC
Confidence 5688999999999997 9999999998889999999999999999999999999999998 6788899999999
Q ss_pred hhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhh
Q 037168 144 VLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAG 223 (466)
Q Consensus 144 pLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa 223 (466)
||| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+
T Consensus 75 ~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~ 146 (179)
T 3f6q_A 75 PLH---LAASHGHRDIVQKLLQ-YKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGAL----VSICNKYGEMPVDKAK 146 (179)
T ss_dssp HHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----SSBCCTTSCCGGGGSC
T ss_pred HHH---HHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----cchhccCCCCcHHHHH
Confidence 999 7778999999999999 7999999999999999999999999999999999998 8999999999999999
Q ss_pred ccCcchhhhcc
Q 037168 224 IKRKDYVAEKM 234 (466)
Q Consensus 224 ~~~~~~~~~~l 234 (466)
..++.++++.|
T Consensus 147 ~~~~~~~~~~L 157 (179)
T 3f6q_A 147 APLRELLRERA 157 (179)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 98888887666
No 73
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=2.8e-28 Score=214.98 Aligned_cols=157 Identities=24% Similarity=0.241 Sum_probs=144.7
Q ss_pred ccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCC
Q 037168 61 RQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRND 140 (466)
Q Consensus 61 ~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~ 140 (466)
.....+.||||.|++.|+. +++++|++. +.+++.+|..|+||||+|+..|+.+++++|++. +.+++.+|.+
T Consensus 9 ~~~~~~~~~l~~A~~~g~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~ 79 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRD-DEVRILMAN-GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKN-------GADVNAVDHA 79 (169)
T ss_dssp ----CHHHHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTT
T ss_pred cCCCcccchHHHHHHcCCH-HHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCccCCC
Confidence 4567788999999999997 999999998 778999999999999999999999999999998 6678889999
Q ss_pred CCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchh
Q 037168 141 KTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFH 220 (466)
Q Consensus 141 g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLH 220 (466)
|+|||| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|..|+||||
T Consensus 80 g~t~L~---~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~l~ 151 (169)
T 2y1l_E 80 GMTPLR---LAALFGHLEIVEVLLK-NGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD----VNAQDKFGKTAFD 151 (169)
T ss_dssp SCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHH
T ss_pred CCCHHH---HHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHH
Confidence 999999 7778999999999998 8999999999999999999999999999999999998 8999999999999
Q ss_pred hhhccCcchhhhcc
Q 037168 221 MAGIKRKDYVAEKM 234 (466)
Q Consensus 221 lAa~~~~~~~~~~l 234 (466)
+|++.++.++++.|
T Consensus 152 ~A~~~~~~~~~~~L 165 (169)
T 2y1l_E 152 ISIDNGNEDLAEIL 165 (169)
T ss_dssp HHHHTTCHHHHHHH
T ss_pred HHHHhCCHHHHHHH
Confidence 99999999888665
No 74
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=2.5e-28 Score=211.57 Aligned_cols=151 Identities=19% Similarity=0.144 Sum_probs=139.4
Q ss_pred CChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChh
Q 037168 66 GNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVL 145 (466)
Q Consensus 66 G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpL 145 (466)
+.||||.|++.|+. ++++.|++.+ .+++ .|..|.||||+|+..|+.+++++|++. +.+++.+|.+|+|||
T Consensus 2 ~~~~L~~A~~~g~~-~~v~~Ll~~g-~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L 71 (153)
T 1awc_B 2 LGKKLLEAARAGQD-DEVRILMANG-APFT-TDWLGTSPLHLAAQYGHFSTTEVLLRA-------GVSRDARTKVDRTPL 71 (153)
T ss_dssp HHHHHHHHHHHTCH-HHHHHHHHHT-CCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTT-------TCCTTCCCTTCCCHH
T ss_pred ccHHHHHHHHcCCH-HHHHHHHHcC-CCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCCCCCCCCCHH
Confidence 46899999999997 9999999994 4454 689999999999999999999999998 667888999999999
Q ss_pred hHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhcc
Q 037168 146 HIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIK 225 (466)
Q Consensus 146 h~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~ 225 (466)
| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..
T Consensus 72 ~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~ 143 (153)
T 1awc_B 72 H---MAASEGHANIVEVLLK-HGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD----VHTQSKFCKTAFDISIDN 143 (153)
T ss_dssp H---HHHHHTCHHHHHHHHT-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHT
T ss_pred H---HHHHcChHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccccCCCCCCHHHHHHHc
Confidence 9 6678899999999998 7999999999999999999999999999999999998 899999999999999999
Q ss_pred Ccchhhhcc
Q 037168 226 RKDYVAEKM 234 (466)
Q Consensus 226 ~~~~~~~~l 234 (466)
++.++++.|
T Consensus 144 ~~~~i~~~L 152 (153)
T 1awc_B 144 GNEDLAEIL 152 (153)
T ss_dssp TCHHHHHHH
T ss_pred CCHHHHHHh
Confidence 999888654
No 75
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=3.9e-28 Score=210.77 Aligned_cols=151 Identities=17% Similarity=0.168 Sum_probs=141.6
Q ss_pred CChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChh
Q 037168 66 GNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVL 145 (466)
Q Consensus 66 G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpL 145 (466)
|.||||.|+..|+. ++++.|++..+.+++.+|..|+||||+ +..|+.+++++|++. +.+++.+|.+|+|||
T Consensus 2 ~~~~L~~A~~~g~~-~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~t~L 72 (156)
T 1bd8_A 2 AGDRLSGAAARGDV-QEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQ-------GASPNVQDTSGTSPV 72 (156)
T ss_dssp HHHHHHHHHHHTCH-HHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHT-------TCCTTCCCTTSCCHH
T ss_pred cchHHHHHHHhCCH-HHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHC-------CCCCCCcCCCCCCHH
Confidence 57999999999997 999999999667899999999999999 999999999999998 678889999999999
Q ss_pred hHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhcc
Q 037168 146 HIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIK 225 (466)
Q Consensus 146 h~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~ 225 (466)
| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|++. ++ ++.+|.+|+||||+|+..
T Consensus 73 ~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~----~~~~~~~g~t~l~~A~~~ 143 (156)
T 1bd8_A 73 H---DAARTGFLDTLKVLVE-HGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD----LHRRDARGLTPLELALQR 143 (156)
T ss_dssp H---HHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC----TTCCCTTSCCHHHHHHHS
T ss_pred H---HHHHcCcHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC----CCCcCCCCCCHHHHHHHc
Confidence 9 7778999999999998 8899999999999999999999999999999998 77 899999999999999999
Q ss_pred Ccchhhhcc
Q 037168 226 RKDYVAEKM 234 (466)
Q Consensus 226 ~~~~~~~~l 234 (466)
++.++++.|
T Consensus 144 ~~~~~v~~L 152 (156)
T 1bd8_A 144 GAQDLVDIL 152 (156)
T ss_dssp CCHHHHHHH
T ss_pred CcHHHHHHH
Confidence 999988665
No 76
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=3.9e-29 Score=231.94 Aligned_cols=193 Identities=12% Similarity=0.033 Sum_probs=157.9
Q ss_pred HHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhc
Q 037168 44 VIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGK 123 (466)
Q Consensus 44 v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~ 123 (466)
++.|++.+.+. ...+..+..|.||||+|+..|+. ++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.
T Consensus 1 v~~ll~~~~~~--~~~~~~~~~~~t~L~~A~~~g~~-~~v~~Ll~~-g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 76 (229)
T 2vge_A 1 MRSVLRKAGSP--RKARRARLNPLVLLLDAALTGEL-EVVQQAVKE-MNDPSQPNEEGITALHNAICGANYSIVDFLITA 76 (229)
T ss_dssp ---------CC--CCCCCTTSCHHHHHHHHHHHTCH-HHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CeehhccCCCC--ccccccccchhHHHHHHHHcCCH-HHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 45677755442 22345677888999999999997 999999998 678999999999999999999999999999998
Q ss_pred cCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccc-cCCChHHHHH--HHcCChhHHHHHHhc
Q 037168 124 ISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHID-DEGRNILHVA--IKYRQLEIFERVVQM 200 (466)
Q Consensus 124 ~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d-~~G~t~Lh~A--~~~~~~~iv~~Ll~~ 200 (466)
+.+++.+|.+|+|||| .|+..|+.++++.|++ .+.+++.+| ..|+||||+| +..|+.+++++|+++
T Consensus 77 -------ga~~n~~d~~g~tpLh---~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ 145 (229)
T 2vge_A 77 -------GANVNSPDSHGWTPLH---CAASCNDTVICMALVQ-HGAAIFATTLSDGATAFEKCDPYREGYADCATYLADV 145 (229)
T ss_dssp -------TCCTTCCCTTCCCHHH---HHHHTTCHHHHHHHHT-TTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHH
T ss_pred -------CCCCCCCCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHc
Confidence 6788999999999999 7778999999999998 899999987 6999999999 999999999999999
Q ss_pred CcccccccccccCCCCCchhhhhccCcchhhhccCChhhhhhhHhhHHhhhhhcCccc--ccccccCCCCChHHHHHHH
Q 037168 201 EIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGPALLLQDELLWYERVKSVTMPH--FLNHRNNMGFIPEELFAIA 277 (466)
Q Consensus 201 g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~~~~l~~~~~~~~~v~~~~~~~--~~~~~n~~g~Tp~~l~~~~ 277 (466)
|++ ++.+|..|.||+|.++.....++ + ...+. .++.+|.+|.||+++|...
T Consensus 146 ga~----~~~~~~~~~~~l~~~~~~~~~~~---l-------------------l~~ga~~~~~~~d~~G~TpL~~A~~~ 198 (229)
T 2vge_A 146 EQS----MGLMNSGAVYALWDYSAEFGDEL---S-------------------FREGESVTVLRRDGPEETDWWWAALH 198 (229)
T ss_dssp HHH----TTTSGGGEEEESSCBCCSSTTBC---C-------------------BCTTCEEEEEESSCTTCSSEEEEEET
T ss_pred CCC----cccccCCchHHHHHHhhcccccc---C-------------------ccccccccccccCCCcccHHHHHHHc
Confidence 998 89999999999997776543322 2 11222 3678899999999987653
No 77
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=5.5e-28 Score=211.08 Aligned_cols=153 Identities=22% Similarity=0.241 Sum_probs=141.5
Q ss_pred CCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCCh
Q 037168 65 AGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNV 144 (466)
Q Consensus 65 ~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~Tp 144 (466)
...||||.|+..|+. ++++.|++. +.+++.+|..|+||||+|+. |+.+++++|++. +.+++.+|..|+||
T Consensus 4 ~~~~~L~~A~~~g~~-~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-------g~~~~~~~~~g~t~ 73 (162)
T 1ihb_A 4 PWGNELASAAARGDL-EQLTSLLQN-NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLR-------GANPDLKDRTGFAV 73 (162)
T ss_dssp -CHHHHHHHHHHTCH-HHHHHHTTS-CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHT-------TCCTTCCCTTSCCH
T ss_pred hHhhHHHHHHHcCCH-HHHHHHHhC-CCCccccCccCccHHHHHHc-CcHHHHHHHHHc-------CCCCCCCCCCCCCH
Confidence 467999999999997 999999987 67899999999999999999 999999999998 67888899999999
Q ss_pred hhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhc
Q 037168 145 LHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGI 224 (466)
Q Consensus 145 Lh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~ 224 (466)
|| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++ .++.+|..|+||||+|++
T Consensus 74 L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~~g~t~l~~A~~ 146 (162)
T 1ihb_A 74 IH---DAARAGFLDTLQTLLE-FQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS---NVGHRNHKGDTACDLARL 146 (162)
T ss_dssp HH---HHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC---CTTCCCTTSCCHHHHHHH
T ss_pred HH---HHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC---CCCCcCCCCCcHHHHHHH
Confidence 99 6778899999999998 8899999999999999999999999999999999986 258999999999999999
Q ss_pred cCcchhhhcc
Q 037168 225 KRKDYVAEKM 234 (466)
Q Consensus 225 ~~~~~~~~~l 234 (466)
.++.++++.|
T Consensus 147 ~~~~~~~~~L 156 (162)
T 1ihb_A 147 YGRNEVVSLM 156 (162)
T ss_dssp TTCHHHHHHH
T ss_pred cCCHHHHHHH
Confidence 9999988766
No 78
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=5.3e-27 Score=218.93 Aligned_cols=156 Identities=18% Similarity=0.195 Sum_probs=112.4
Q ss_pred CCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCC
Q 037168 63 NKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKT 142 (466)
Q Consensus 63 d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~ 142 (466)
+..|.||||.|++.|+. +.++.|+++ +.+++. +..|.||||.|+..|+.+++++|++. +.+++.+|.+|+
T Consensus 2 ~~~g~t~L~~a~~~~~~-~~~~~ll~~-g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~-------g~~~~~~d~~g~ 71 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLR-KTGSERIAH-GMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYE-------VDDPSLPNDEGI 71 (239)
T ss_dssp --------------------------------------CHHHHHHHHHHTCHHHHHHHTST-------TSSCCCCCTTSC
T ss_pred CccccccCchhhhhhhH-HHHHHHhcc-CCCccc-CchhhHHHHHHHHcCCHHHHHHHHHc-------CCCCCCcCCCCC
Confidence 45699999999999996 999999988 666775 47899999999999999999999988 668889999999
Q ss_pred ChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCC-Cchhh
Q 037168 143 NVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGN-TIFHM 221 (466)
Q Consensus 143 TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~-TpLHl 221 (466)
|||| .|+..|+.++++.|++ ++++++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|..|. ||||+
T Consensus 72 t~L~---~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~~~~t~l~~ 143 (239)
T 1ycs_B 72 TALH---NAVCAGHTEIVKFLVQ-FGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA----VFAMTYSDMQTAADK 143 (239)
T ss_dssp CHHH---HHHHHTCHHHHHHHHH-HTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCSSSCCCHHHH
T ss_pred CHHH---HHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----cceecCCCCcchHHH
Confidence 9999 7778899999999999 6899999999999999999999999999999999998 899998877 99999
Q ss_pred h--hccCcchhhhccCC
Q 037168 222 A--GIKRKDYVAEKMEG 236 (466)
Q Consensus 222 A--a~~~~~~~~~~l~~ 236 (466)
| +..++.++++.|..
T Consensus 144 a~~~~~g~~~~~~~Ll~ 160 (239)
T 1ycs_B 144 CEEMEEGYTQCSQFLYG 160 (239)
T ss_dssp CCSSSTTCCCHHHHHHH
T ss_pred HHHhhhccHHHHHHHHH
Confidence 9 77888998877743
No 79
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=5.6e-27 Score=210.12 Aligned_cols=158 Identities=12% Similarity=0.073 Sum_probs=137.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccC-CCCChHHHHHHHcCCcH---HHHHHHHHhCCCcccCcCCCCCh
Q 037168 28 DDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQN-KAGNTILHETATSNHAL---PVADKVLRKAPGLLGMRNNNGET 103 (466)
Q Consensus 28 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d-~~G~TpLh~Aa~~g~~~---~~v~~Ll~~~~~~~~~~d~~G~t 103 (466)
+.++||.|++.|+.+.++.+++.+. +..+ ..|+||||+|+..|+.. +++++|+++ |++++.+|.+|+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~-------~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-Gadvn~~d~~g~T 77 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY-------EDKESVLKSNILYDVLRNNNDEARYKISMFLINK-GADIKSRTKEGTT 77 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS-------SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT-TCCSSCCCTTCCC
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc-------ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHC-CCCCCCCCCCCCc
Confidence 5689999999999999999998543 3344 67999999999998742 489999987 8899999999999
Q ss_pred HHHHHHHcCC------HHHHHHHHhccCCCCCCCcccccccCCCC-ChhhHHHHHhhc-----CcHHHHHHHHHHCCCcc
Q 037168 104 ALLRAARYGK------VDIFNFLAGKISGYDHATRLPFLHRNDKT-NVLHIAILSLHF-----GCIEIVKDILSVYPQAV 171 (466)
Q Consensus 104 pLh~Aa~~g~------~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~-TpLh~A~~a~~~-----g~~~~v~~Ll~~~~~~~ 171 (466)
|||+|+..|+ .+++++|+++ |++++.+|.+|+ |||| .|+.. ++.++++.|++..|+++
T Consensus 78 pLh~a~~~~~~~~~~~~~iv~~Ll~~-------Gadin~~d~~g~ttpLh---~A~~~~~~~~~~~~iv~~Ll~~~gad~ 147 (186)
T 3t8k_A 78 LFFPLFQGGGNDITGTTELCKIFLEK-------GADITALYKPYKIVVFK---NIFNYFVDENEMIPLYKLIFSQSGLQL 147 (186)
T ss_dssp THHHHHHHCTTCHHHHHHHHHHHHHT-------TCCSSSCBGGGTBCTTG---GGGGCCSCHHHHHHHHHHHHTSTTCCT
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHC-------CCCCCccCCCcCchHHH---HHHHcCCChhhHHHHHHHHHHhcCCCC
Confidence 9999999987 5889999998 789999999999 9999 44453 45679999997679999
Q ss_pred cccccCCChHHHHHHHcCChhHHHHHHhcCcc
Q 037168 172 EHIDDEGRNILHVAIKYRQLEIFERVVQMEIP 203 (466)
Q Consensus 172 ~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~ 203 (466)
+.+|..|+||||+|++.|+.+++++|.+....
T Consensus 148 ~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 148 LIKDKWGLTALEFVKRCQKPIALKMMEDYIKK 179 (186)
T ss_dssp TCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999987544
No 80
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=2.4e-26 Score=199.81 Aligned_cols=145 Identities=10% Similarity=0.026 Sum_probs=100.1
Q ss_pred hccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccC
Q 037168 60 TRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRN 139 (466)
Q Consensus 60 ~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~ 139 (466)
+..+..|.||||+|+..|+. +++++|+++ +.+++.+|..|+||||+|+ .|+.+++++|++. +.+++.+|.
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~-------g~~~~~~d~ 75 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRV-EEVRALLEA-GANPNAPNSYGRRPIQVMM-MGSARVAELLLLH-------GAEPNCADP 75 (156)
T ss_dssp ----CCSTTHHHHHHHHTCH-HHHHHHHTT-TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTT-------TCCCCCCCT
T ss_pred cCCCccchHHHHHHHHcCCH-HHHHHHHHc-CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHc-------CCCCCCcCC
Confidence 34567788888888888885 888888876 6677888888888888874 7888888888877 567777788
Q ss_pred CCCC-hhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCc
Q 037168 140 DKTN-VLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTI 218 (466)
Q Consensus 140 ~g~T-pLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~Tp 218 (466)
.|+| ||| .|+..|+.++++.|++ ++++++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|..|+||
T Consensus 76 ~g~ttpL~---~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~ 147 (156)
T 1bi7_B 76 ATLTRPVH---DAAREGFLDTLVVLHR-AGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG----TRGSNHARIDA 147 (156)
T ss_dssp TTCCCHHH---HHHHHTCHHHHHHHHH-HTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred CCCcHHHH---HHHHCCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC----CCccCcCcCcc
Confidence 8887 888 5667788888888887 5778888888888888888888888888888888887 88888888888
Q ss_pred hhhh
Q 037168 219 FHMA 222 (466)
Q Consensus 219 LHlA 222 (466)
.+-+
T Consensus 148 ~~~~ 151 (156)
T 1bi7_B 148 AEGP 151 (156)
T ss_dssp ----
T ss_pred cccC
Confidence 7743
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=4.4e-26 Score=193.38 Aligned_cols=132 Identities=12% Similarity=0.055 Sum_probs=88.8
Q ss_pred hhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccc
Q 037168 58 KMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLH 137 (466)
Q Consensus 58 ~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~ 137 (466)
+++.+|..|.||||+|+..|+. +++++|+++ +.+++.+|..|+||||+|+. |+.+++++|++. +.+++.+
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-------g~~~~~~ 73 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQV-ETVRQLLEA-GADPNALNRFGRRPIQVMMM-GSAQVAELLLLH-------GAEPNCA 73 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHH-------TCCSSCC
T ss_pred CccCCCCCCccHHHHHHHcCCH-HHHHHHHHc-CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHC-------CCCCCCc
Confidence 4556666666666666666664 666666666 45566666666666666666 666666666666 4556666
Q ss_pred cCC-CCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcc
Q 037168 138 RND-KTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIP 203 (466)
Q Consensus 138 d~~-g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~ 203 (466)
|.. |+|||| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+++.+++++|+++|+|
T Consensus 74 ~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 74 DPATLTRPVH---DAAREGFLDTLVVLHR-AGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp BTTTTBCHHH---HHHHHTCHHHHHHHHH-TCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 666 677777 4556667777777776 6666777777777777777777777777777776653
No 82
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=1.2e-25 Score=195.42 Aligned_cols=146 Identities=14% Similarity=0.025 Sum_probs=115.7
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCC
Q 037168 21 LYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNN 100 (466)
Q Consensus 21 ~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~ 100 (466)
....+..|.||||+|++.|+.+++++|++ .+.+++.+|..|+||||+|+ .|+. +++++|++. +.+++.+|..
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~-~~~~-~~v~~Ll~~-g~~~~~~d~~ 76 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLE-----AGANPNAPNSYGRRPIQVMM-MGSA-RVAELLLLH-GAEPNCADPA 76 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHT-----TTCCTTCCCSSSCCTTTSSC-TTCH-HHHHHHHTT-TCCCCCCCTT
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHH-----cCCCCCCCCCCCCCHHHHHH-cCCH-HHHHHHHHc-CCCCCCcCCC
Confidence 34568889999999999999999999999 55678899999999999985 7886 999999998 7889999999
Q ss_pred CCh-HHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCC
Q 037168 101 GET-ALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGR 179 (466)
Q Consensus 101 G~t-pLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~ 179 (466)
|+| |||+|+..|+.+++++|+++ +++++.+|.+|+|||| .|+..|+.+++++|++ ++++++.+|..|.
T Consensus 77 g~ttpL~~A~~~~~~~~v~~Ll~~-------ga~~~~~d~~g~tpl~---~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~ 145 (156)
T 1bi7_B 77 TLTRPVHDAAREGFLDTLVVLHRA-------GARLDVRDAWGRLPVD---LAEELGHRDVARYLRA-AAGGTRGSNHARI 145 (156)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHH-------TCCSSCCCTTCCCHHH---HHHHHTCHHHHHHHSS-CC-----------
T ss_pred CCcHHHHHHHHCCCHHHHHHHHHc-------CCCCcccCCCCCCHHH---HHHHhCHHHHHHHHHH-cCCCCCccCcCcC
Confidence 999 99999999999999999999 6788999999999999 6778899999999998 8999999999999
Q ss_pred hHHHHH
Q 037168 180 NILHVA 185 (466)
Q Consensus 180 t~Lh~A 185 (466)
|+.+-+
T Consensus 146 t~~~~~ 151 (156)
T 1bi7_B 146 DAAEGP 151 (156)
T ss_dssp ------
T ss_pred cccccC
Confidence 998744
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=3.2e-25 Score=188.01 Aligned_cols=130 Identities=16% Similarity=0.081 Sum_probs=120.9
Q ss_pred CccccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCc
Q 037168 18 DHALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMR 97 (466)
Q Consensus 18 ~~~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~ 97 (466)
+.+++..|..|.||||+|++.|+.+++++|++ .+.+++.+|..|+||||+|+. |+. +++++|++. +.+++.+
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~-~~~-~~v~~Ll~~-g~~~~~~ 73 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLE-----AGADPNALNRFGRRPIQVMMM-GSA-QVAELLLLH-GAEPNCA 73 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTCCTTTTTSTT-SCH-HHHHHHHHH-TCCSSCC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHH-----cCCCcCCcCCCCCCHHHHHHc-CCH-HHHHHHHHC-CCCCCCc
Confidence 46788899999999999999999999999999 456788999999999999999 996 999999998 7789999
Q ss_pred CCC-CChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHH
Q 037168 98 NNN-GETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILS 165 (466)
Q Consensus 98 d~~-G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~ 165 (466)
|.. |+||||+|+..|+.+++++|++. +.+++.+|.+|+|||| .|+..|+.++++.|++
T Consensus 74 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------ga~~~~~d~~g~tpl~---~A~~~~~~~~~~~Ll~ 132 (136)
T 1d9s_A 74 DPATLTRPVHDAAREGFLDTLVVLHRA-------GARLDVCDAWGRLPVD---LAEEQGHRDIARYLHA 132 (136)
T ss_dssp BTTTTBCHHHHHHHHTCHHHHHHHHHT-------CCCCCCCSSSSSCHHH---HHHHHTCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCccCCCCCCHHH---HHHHcCCHHHHHHHHH
Confidence 999 99999999999999999999998 6788899999999999 6778899999999998
No 84
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.92 E-value=7.6e-27 Score=231.70 Aligned_cols=179 Identities=13% Similarity=0.091 Sum_probs=145.7
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCc--ccCcCCC
Q 037168 23 VFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGL--LGMRNNN 100 (466)
Q Consensus 23 ~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~--~~~~d~~ 100 (466)
..+.+++||||+||+.|+.++|++|++.+... ...+..|..|.||||+|+..|+. +++++|+++++.. .+..+.+
T Consensus 87 ~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~--~~~~~~~~~~~tpL~~Aa~~G~~-eiv~~Ll~~gad~~~~~i~~~~ 163 (376)
T 2aja_A 87 KKGIKSEVICFVAAITGCSSALDTLCLLLTSD--EIVKVIQAENYQAFRLAAENGHL-HVLNRLCELAPTEIMAMIQAEN 163 (376)
T ss_dssp HHTCCHHHHHHHHHHHCCHHHHHHHTTC--CC--SSCC--CHHHHHHHHHHHHTTCH-HHHHHHHHSCTTTHHHHHSHHH
T ss_pred HcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcH--HHHHHhccCCCCHHHHHHHcCCH-HHHHHHHhCCCCccccccCCCC
Confidence 34667789999999999999999999965421 11223466788999999999996 9999999985320 2222333
Q ss_pred CChHHHHHHHcCCHHHHHHHHhccCCCCCCCccccc--ccCCCCChhhHHHHHh-hcCcHHHHHHHHHHCCCcccccccC
Q 037168 101 GETALLRAARYGKVDIFNFLAGKISGYDHATRLPFL--HRNDKTNVLHIAILSL-HFGCIEIVKDILSVYPQAVEHIDDE 177 (466)
Q Consensus 101 G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~--~d~~g~TpLh~A~~a~-~~g~~~~v~~Ll~~~~~~~~~~d~~ 177 (466)
+||||+|+..|+.+++++|+++ +.+++. .|.+|.|||| .|+ ..|+.+++++|++ .|. .
T Consensus 164 -~TpLh~Aa~~G~~eiv~~Ll~~-------ga~~~~~~~d~~g~TpL~---~Aa~~~G~~eiv~~Ll~-~ga-------~ 224 (376)
T 2aja_A 164 -YHAFRLAAENGHLHVLNRLCEL-------APTEATAMIQAENYYAFR---WAAVGRGHHNVINFLLD-CPV-------M 224 (376)
T ss_dssp -HHHHHHHHHTTCHHHHHHHHHS-------CGGGHHHHHHHHHHHHHH---HHHSTTCCHHHHHHHTT-SHH-------H
T ss_pred -CCHHHHHHHCCCHHHHHHHHHc-------CCccchhccCCCCCCHHH---HHHHHCCCHHHHHHHHh-CCC-------c
Confidence 9999999999999999999998 566666 8889999999 888 9999999999998 553 3
Q ss_pred CChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhh
Q 037168 178 GRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVA 231 (466)
Q Consensus 178 G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~ 231 (466)
|+||||+|+.+|+.+++++|+++|++ ++.+| ++++.|+..|+.+++
T Consensus 225 ~~taL~~Aa~~g~~evv~lL~~~ga~----~~~~~----~~l~~A~~~g~~~vv 270 (376)
T 2aja_A 225 LAYAEIHEFEYGEKYVNPFIARHVNR----LKEMH----DAFKLSNPDGVFDLV 270 (376)
T ss_dssp HHHHHHCTTTTTTTTHHHHHHHHHHH----HHHHH----TTTTTTSSSSCCCCS
T ss_pred cchHHHHHHHCCCHHHHHHHHhcCcc----ccccc----HHHHHHHHCCChhhh
Confidence 89999999999999999999999987 66555 489999999988865
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=1e-25 Score=201.92 Aligned_cols=150 Identities=13% Similarity=0.069 Sum_probs=131.6
Q ss_pred CChHHHHHHHcCCcHHHHHHHHHhCCCcccCcC-CCCChHHHHHHHcCCH----HHHHHHHhccCCCCCCCcccccccCC
Q 037168 66 GNTILHETATSNHALPVADKVLRKAPGLLGMRN-NNGETALLRAARYGKV----DIFNFLAGKISGYDHATRLPFLHRND 140 (466)
Q Consensus 66 G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d-~~G~tpLh~Aa~~g~~----~~v~~Ll~~~~~~~~~~~~~~~~d~~ 140 (466)
+.++||.|++.|+. +.++.++..+ ++.++ ..|+||||+|+..|+. +++++|++. |++++.+|.+
T Consensus 6 ~~~~l~~Aa~~g~~-~~~~~l~~~~---~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-------Gadvn~~d~~ 74 (186)
T 3t8k_A 6 EYRTVSAAAMLGTY-EDFLELFEKG---YEDKESVLKSNILYDVLRNNNDEARYKISMFLINK-------GADIKSRTKE 74 (186)
T ss_dssp HCSSHHHHHHHSCH-HHHHHHHHHS---SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT-------TCCSSCCCTT
T ss_pred cccHHHHHHHcCCH-HHHHHHHhcC---cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHC-------CCCCCCCCCC
Confidence 56899999999997 8888888874 34555 7899999999999975 599999998 7899999999
Q ss_pred CCChhhHHHHHhhcCc------HHHHHHHHHHCCCcccccccCCC-hHHHHHHHcCC-----hhHHHHHHh-cCcccccc
Q 037168 141 KTNVLHIAILSLHFGC------IEIVKDILSVYPQAVEHIDDEGR-NILHVAIKYRQ-----LEIFERVVQ-MEIPLRRL 207 (466)
Q Consensus 141 g~TpLh~A~~a~~~g~------~~~v~~Ll~~~~~~~~~~d~~G~-t~Lh~A~~~~~-----~~iv~~Ll~-~g~~~~~~ 207 (466)
|+||||+|+ ..|+ .++++.|++ .|+++|.+|+.|+ ||||+|+..+. .+++++|++ +|++
T Consensus 75 g~TpLh~a~---~~~~~~~~~~~~iv~~Ll~-~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad---- 146 (186)
T 3t8k_A 75 GTTLFFPLF---QGGGNDITGTTELCKIFLE-KGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ---- 146 (186)
T ss_dssp CCCTHHHHH---HHCTTCHHHHHHHHHHHHH-TTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC----
T ss_pred CCcHHHHHH---HcCCcchhhHHHHHHHHHH-CCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC----
Confidence 999999554 4444 689999998 8999999999999 99999999553 569999999 9999
Q ss_pred cccccCCCCCchhhhhccCcchhhhcc
Q 037168 208 VRKIDYNGNTIFHMAGIKRKDYVAEKM 234 (466)
Q Consensus 208 ~~~~d~~G~TpLHlAa~~~~~~~~~~l 234 (466)
++.+|..|+||||+|++.++.++++.|
T Consensus 147 ~~~~d~~G~TpL~~A~~~~~~~~v~~L 173 (186)
T 3t8k_A 147 LLIKDKWGLTALEFVKRCQKPIALKMM 173 (186)
T ss_dssp TTCCCTTSCCHHHHHHTTTCHHHHHHH
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999999999999888666
No 86
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=9.1e-24 Score=175.63 Aligned_cols=126 Identities=27% Similarity=0.357 Sum_probs=84.3
Q ss_pred CCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCCh
Q 037168 65 AGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNV 144 (466)
Q Consensus 65 ~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~Tp 144 (466)
+|+||||+|++.|+. +++++|++. +.+++.+|..|.||||+|+..|+.+++++|++. +.+++.+|..|.||
T Consensus 1 ~g~t~L~~A~~~~~~-~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~g~t~ 71 (126)
T 1n0r_A 1 NGRTPLHLAARNGHL-EVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA-------GADVNAKDKNGRTP 71 (126)
T ss_dssp CCCCHHHHHHHHTCH-HHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCH
T ss_pred CCccHHHHHHHcCcH-HHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHc-------CCCCcccCCCCCcH
Confidence 366666666666664 666666666 455666666666666666666666666666665 44556666667777
Q ss_pred hhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcc
Q 037168 145 LHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIP 203 (466)
Q Consensus 145 Lh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~ 203 (466)
|| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|++
T Consensus 72 l~---~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 72 LH---LAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HH---HHHHcChHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 77 5556667777777766 5666677777777777777777777777777776653
No 87
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=5.3e-24 Score=180.47 Aligned_cols=126 Identities=17% Similarity=0.185 Sum_probs=78.2
Q ss_pred CCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCC
Q 037168 63 NKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKT 142 (466)
Q Consensus 63 d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~ 142 (466)
...|.||||+|+..|+. ++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++. +.+++.+|.+|.
T Consensus 11 ~~~~~t~l~~A~~~g~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~d~~g~ 81 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQD-DEVRILMAN-GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKN-------GADVNAVDAIGF 81 (136)
T ss_dssp -CHHHHHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTCC
T ss_pred cccccHHHHHHHHhCCH-HHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCcCCCCCC
Confidence 34456666666666664 666666665 455666666666666666666666666666665 445555666666
Q ss_pred ChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcC
Q 037168 143 NVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQME 201 (466)
Q Consensus 143 TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g 201 (466)
|||| .|+..|+.++++.|++ .+.+++.+|..|+||||+|+.+|+.+++++|+++|
T Consensus 82 t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 82 TPLH---LAAFIGHLEIAEVLLK-HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CHHH---HHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CHHH---HHHHcCCHHHHHHHHH-cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 6666 4445566666666666 56666666666666666666666666666666554
No 88
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=5e-24 Score=180.76 Aligned_cols=124 Identities=17% Similarity=0.173 Sum_probs=112.4
Q ss_pred CcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccc
Q 037168 96 MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHID 175 (466)
Q Consensus 96 ~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d 175 (466)
.+|.+|+||||+|+..|+.+++++|++. +.+++.+|..|+|||| .|+..|+.++++.|++ .+.+++.+|
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~~~~Ll~-~g~~~~~~~ 73 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQN-------GSDPNVKDHAGWTPLH---EACNHGHLKVVELLLQ-HKALVNTTG 73 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHT-------TCCSCCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCcCCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCcccCcC
Confidence 6788999999999999999999999988 5677888899999999 6678899999999998 788999999
Q ss_pred cCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168 176 DEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM 234 (466)
Q Consensus 176 ~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l 234 (466)
..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..+..++++++
T Consensus 74 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~~l~~l 128 (137)
T 3c5r_A 74 YQNDSPLHDAAKNGHVDIVKLLLSYGAS----RNAVNIFGLRPVDYTDDESMKSLLLLP 128 (137)
T ss_dssp GGGCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCGGGGCCCHHHHHHHSCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCCCCCCCCHHHHHhhccHHHHHhhc
Confidence 9999999999999999999999999988 899999999999999998888777665
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=1.5e-23 Score=177.64 Aligned_cols=126 Identities=16% Similarity=0.100 Sum_probs=115.0
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCC
Q 037168 23 VFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGE 102 (466)
Q Consensus 23 ~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~ 102 (466)
.....|.||||.||..|+.++++.|++ .+.+++.+|..|+||||+|+..|+. +++++|++. +.+++.+|.+|+
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~d~~g~ 81 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMA-----NGADVNAKDEYGLTPLYLATAHGHL-EIVEVLLKN-GADVNAVDAIGF 81 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCTTCC
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHH-----cCCCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCcCCCCCC
Confidence 346678999999999999999999999 4566889999999999999999996 999999988 778999999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHH
Q 037168 103 TALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILS 165 (466)
Q Consensus 103 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~ 165 (466)
||||+|+..|+.+++++|++. +.+++.+|.+|+|||| .|+..|+.++++.|++
T Consensus 82 t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g~tpl~---~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 82 TPLHLAAFIGHLEIAEVLLKH-------GADVNAQDKFGKTAFD---ISIGNGNEDLAEILQK 134 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHc-------CCCCcCcCCCCCCHHH---HHHHCCCHHHHHHHHH
Confidence 999999999999999999998 6788899999999999 7778999999999997
No 90
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=7.7e-24 Score=198.15 Aligned_cols=144 Identities=16% Similarity=0.101 Sum_probs=125.8
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcC-CCCC
Q 037168 24 FTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRN-NNGE 102 (466)
Q Consensus 24 ~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d-~~G~ 102 (466)
.+.+|+||||.|++.|+.++++.|++ + .+++.+|..|+||||+|+..|+. +++++|+++ +.+++.+| ..|+
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~-----~~~~~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~-ga~~~~~~~~~g~ 112 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-D-----RDVDAVDENGRTALLFVAGLGSD-KCVRLLAEA-GADLDHRDMRGGL 112 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-T-----CCTTCBCTTSCBHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCSSSCC
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-C-----CCCCCcCCCCCCHHHHHHHCCCH-HHHHHHHHc-CCCCCcCCCCCCC
Confidence 34578999999999999999999998 3 35788999999999999999996 999999998 77888888 8899
Q ss_pred hHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHH
Q 037168 103 TALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNIL 182 (466)
Q Consensus 103 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~L 182 (466)
||||+|+..|+.+++++|+++ +++++.+|.+|+||||+|+ . +. .+..+.|||
T Consensus 113 t~L~~A~~~g~~~~v~~Ll~~-------ga~~~~~d~~g~t~l~~A~---~---------~~---------~~~~~~~~l 164 (244)
T 3ui2_A 113 TALHMAAGYVRPEVVEALVEL-------GADIEVEDERGLTALELAR---E---------IL---------KTTPKGNPM 164 (244)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTCCCHHHHHH---H---------HH---------TTCCCSSHH
T ss_pred CHHHHHHHcCCHHHHHHHHHC-------CCCCCCCCCCCCcHHHHHH---H---------HH---------hccCCCCHH
Confidence 999999999999999999998 6788899999999999554 2 11 135789999
Q ss_pred HHHHHcCChhHHHHHHhcCcc
Q 037168 183 HVAIKYRQLEIFERVVQMEIP 203 (466)
Q Consensus 183 h~A~~~~~~~iv~~Ll~~g~~ 203 (466)
|+|+..|+.+++++|++++.+
T Consensus 165 ~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 165 QFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHcChHHHHHHHHHhccc
Confidence 999999999999999987655
No 91
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.90 E-value=4.4e-23 Score=171.42 Aligned_cols=125 Identities=26% Similarity=0.337 Sum_probs=114.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHH
Q 037168 27 HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALL 106 (466)
Q Consensus 27 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh 106 (466)
+|+||||.|++.|+.+++++|++. +.+++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..|.||||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-----~~~~~~~~~~g~t~L~~A~~~~~~-~~~~~Ll~~-g~~~~~~~~~g~t~l~ 73 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEA-----GADVNAKDKNGRTPLHLAARNGHL-EVVKLLLEA-GADVNAKDKNGRTPLH 73 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHH-----TCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHc-----CCCCCCcCCCCCcHHHHHHHcCcH-HHHHHHHHc-CCCCcccCCCCCcHHH
Confidence 589999999999999999999994 456788999999999999999996 999999998 7789999999999999
Q ss_pred HHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCC
Q 037168 107 RAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQ 169 (466)
Q Consensus 107 ~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~ 169 (466)
+|+..|+.+++++|++. +.+++.+|.+|.|||| .|+..|+.+++++|++ +|+
T Consensus 74 ~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~g~t~l~---~A~~~~~~~~~~~Ll~-~Ga 125 (126)
T 1n0r_A 74 LAARNGHLEVVKLLLEA-------GADVNAKDKNGRTPLH---LAARNGHLEVVKLLLE-AGA 125 (126)
T ss_dssp HHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-HTC
T ss_pred HHHHcChHHHHHHHHHc-------CCCCcccCCCCCCHHH---HHHHcCcHHHHHHHHH-cCC
Confidence 99999999999999998 6678889999999999 7778999999999998 444
No 92
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=5.6e-25 Score=205.90 Aligned_cols=167 Identities=15% Similarity=0.063 Sum_probs=140.7
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHH
Q 037168 26 IHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETAL 105 (466)
Q Consensus 26 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpL 105 (466)
..+.+++.+++..|+.+.+..+.. .+ ...+.+|+||||+|++.|+. ++++.|++ +.+++.+|..|+|||
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~~-----~~---~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~--~~~~~~~d~~g~t~L 81 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSSY-----IA---ADVVSEYETPWWTAARKADE-QALSQLLE--DRDVDAVDENGRTAL 81 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGGG-----SC---HHHHHHHHHHHHHHHTTTCH-HHHHHTTT--TCCTTCBCTTSCBHH
T ss_pred CCCccHHHHHHHcCCCcccccccc-----cc---cccccCCCCHHHHHHHcCCH-HHHHHHHc--CCCCCCcCCCCCCHH
Confidence 346677777777777666554443 12 22346799999999999997 99999998 678999999999999
Q ss_pred HHHHHcCCHHHHHHHHhccCCCCCCCccccccc-CCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHH
Q 037168 106 LRAARYGKVDIFNFLAGKISGYDHATRLPFLHR-NDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHV 184 (466)
Q Consensus 106 h~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d-~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~ 184 (466)
|+|+..|+.+++++|+++ +.+++.+| .+|+|||| .|+..|+.++++.|++ ++++++.+|..|+||||+
T Consensus 82 ~~A~~~g~~~~v~~Ll~~-------ga~~~~~~~~~g~t~L~---~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~ 150 (244)
T 3ui2_A 82 LFVAGLGSDKCVRLLAEA-------GADLDHRDMRGGLTALH---MAAGYVRPEVVEALVE-LGADIEVEDERGLTALEL 150 (244)
T ss_dssp HHHHHHTCHHHHHHHHHT-------TCCTTCCCSSSCCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHH
T ss_pred HHHHHCCCHHHHHHHHHc-------CCCCCcCCCCCCCCHHH---HHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHH
Confidence 999999999999999998 67888888 78999999 7778999999999999 799999999999999999
Q ss_pred HHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccC
Q 037168 185 AIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKME 235 (466)
Q Consensus 185 A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~ 235 (466)
|+..+ .+..|.||||+|+..|+.++++.|.
T Consensus 151 A~~~~---------------------~~~~~~~~l~~a~~~g~~~iv~~L~ 180 (244)
T 3ui2_A 151 AREIL---------------------KTTPKGNPMQFGRRIGLEKVINVLE 180 (244)
T ss_dssp HHHHH---------------------TTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH---------------------hccCCCCHHHHHHHcChHHHHHHHH
Confidence 98622 1256899999999999999887774
No 93
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=1.8e-23 Score=186.68 Aligned_cols=141 Identities=15% Similarity=0.079 Sum_probs=122.4
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcC-CCCC
Q 037168 24 FTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRN-NNGE 102 (466)
Q Consensus 24 ~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d-~~G~ 102 (466)
.+.+|+||||.|++.|+.++++.|++ + .+++.+|..|+||||+|+..|+. +++++|++. +.+++.+| ..|+
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~-----~~~~~~d~~g~t~L~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~~g~ 111 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-D-----RDVDAVDENGRTALLFVAGLGSD-KCVRLLAEA-GADLDHRDMRGGL 111 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-T-----SCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCSSSSC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-c-----CCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCcCCCCCCC
Confidence 35678999999999999999999998 3 35788999999999999999996 999999988 67788888 8999
Q ss_pred hHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHH
Q 037168 103 TALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNIL 182 (466)
Q Consensus 103 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~L 182 (466)
||||+|+..|+.+++++|+++ +++++.+|.+|+||||+|+ ..+ ....+.++|
T Consensus 112 tpL~~A~~~~~~~~v~~Ll~~-------ga~~~~~d~~g~tpl~~A~---~~~------------------~~~~~~~~l 163 (183)
T 3deo_A 112 TALHMAAGYVRPEVVEALVEL-------GADIEVEDERGLTALELAR---EIL------------------KTTPKGNPM 163 (183)
T ss_dssp CHHHHHHHTTCHHHHHHHHHH-------TCCTTCCCTTSCCHHHHHH---HHH------------------HTCCCCSHH
T ss_pred CHHHHHHhcCcHHHHHHHHHc-------CCCCcCCCCCCCCHHHHHH---Hhc------------------cCcccccHH
Confidence 999999999999999999998 6788899999999999554 311 124678999
Q ss_pred HHHHHcCChhHHHHHHhc
Q 037168 183 HVAIKYRQLEIFERVVQM 200 (466)
Q Consensus 183 h~A~~~~~~~iv~~Ll~~ 200 (466)
++|+..|+.+++++|.++
T Consensus 164 ~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 164 QFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCHHHHHHHHHHh
Confidence 999999999999999765
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=6.9e-24 Score=179.89 Aligned_cols=126 Identities=20% Similarity=0.169 Sum_probs=84.6
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCC
Q 037168 23 VFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGE 102 (466)
Q Consensus 23 ~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~ 102 (466)
..|.+|+||||+|+..|+.+++++|++ .+.+++.+|..|+||||+|+..|+. +++++|++. +.+++.+|..|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-~~~~~Ll~~-g~~~~~~~~~g~ 77 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQ-----NGSDPNVKDHAGWTPLHEACNHGHL-KVVELLLQH-KALVNTTGYQND 77 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHH-----TTCCSCCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCGGGC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCcCCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCcccCcCCCCC
Confidence 456677777777777777777777777 3445666677777777777777765 777777766 556677777777
Q ss_pred hHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHH
Q 037168 103 TALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILS 165 (466)
Q Consensus 103 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~ 165 (466)
||||+|+..|+.+++++|++. +.+++.+|.+|.|||| .|+..+..++++.+.+
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~-------ga~~~~~~~~g~tpl~---~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 78 SPLHDAAKNGHVDIVKLLLSY-------GASRNAVNIFGLRPVD---YTDDESMKSLLLLPEK 130 (137)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCGGG---GCCCHHHHHHHSCC--
T ss_pred CHHHHHHHcCCHHHHHHHHHc-------CCCCCCCCCCCCCHHH---HHhhccHHHHHhhccc
Confidence 777777777777777777766 4566666777777777 5555566666655544
No 95
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.89 E-value=1.1e-24 Score=216.09 Aligned_cols=177 Identities=11% Similarity=0.088 Sum_probs=142.8
Q ss_pred CCcHHHHHHH-cCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCC--cccCcCCCCChH
Q 037168 28 DDTVLHMATY-TKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPG--LLGMRNNNGETA 104 (466)
Q Consensus 28 g~T~Lh~A~~-~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~--~~~~~d~~G~tp 104 (466)
+.+++++|.. .++.++++++++. +.+++||||+|++.|+. +++++|++++.. ..+..|..|.||
T Consensus 65 ~ll~~~~a~~~~~~~~~~~~l~~~------------g~~~~T~Lh~Aa~~G~~-e~v~~Ll~~ga~~~~~~~~~~~~~tp 131 (376)
T 2aja_A 65 QLLCLYYAHYNRNAKQLWSDAHKK------------GIKSEVICFVAAITGCS-SALDTLCLLLTSDEIVKVIQAENYQA 131 (376)
T ss_dssp HHHHHHHHHTTTTCTTHHHHHHHH------------TCCHHHHHHHHHHHCCH-HHHHHHTTC--CCSSCC--CHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHc------------CCCcCCHHHHHHHcCCH-HHHHHHHHcCCcHHHHHHhccCCCCH
Confidence 4568888877 5788899988884 33456999999999997 999999988431 223456678999
Q ss_pred HHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccc--cccCCChHH
Q 037168 105 LLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEH--IDDEGRNIL 182 (466)
Q Consensus 105 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~--~d~~G~t~L 182 (466)
||+|+..|+.+++++|++++++. ...+..+.+ .|||| .|+..|+.+++++|++ .+++++. +|..|+|||
T Consensus 132 L~~Aa~~G~~eiv~~Ll~~gad~----~~~~i~~~~-~TpLh---~Aa~~G~~eiv~~Ll~-~ga~~~~~~~d~~g~TpL 202 (376)
T 2aja_A 132 FRLAAENGHLHVLNRLCELAPTE----IMAMIQAEN-YHAFR---LAAENGHLHVLNRLCE-LAPTEATAMIQAENYYAF 202 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHSCTTT----HHHHHSHHH-HHHHH---HHHHTTCHHHHHHHHH-SCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCc----cccccCCCC-CCHHH---HHHHCCCHHHHHHHHH-cCCccchhccCCCCCCHH
Confidence 99999999999999999984310 002333333 99999 7789999999999999 7888887 899999999
Q ss_pred HHHH-HcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCCh
Q 037168 183 HVAI-KYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGP 237 (466)
Q Consensus 183 h~A~-~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~ 237 (466)
|+|+ .+|+.+++++|+++|++ |+||||+|+..|+.+++++|...
T Consensus 203 ~~Aa~~~G~~eiv~~Ll~~ga~-----------~~taL~~Aa~~g~~evv~lL~~~ 247 (376)
T 2aja_A 203 RWAAVGRGHHNVINFLLDCPVM-----------LAYAEIHEFEYGEKYVNPFIARH 247 (376)
T ss_dssp HHHHSTTCCHHHHHHHTTSHHH-----------HHHHHHCTTTTTTTTHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHhCCCc-----------cchHHHHHHHCCCHHHHHHHHhc
Confidence 9999 99999999999997742 88999999999999998887443
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=1.7e-22 Score=194.97 Aligned_cols=140 Identities=14% Similarity=0.082 Sum_probs=121.0
Q ss_pred CChHHHHHHHcCCcHHHHHHHHHhCCCcccC------cCCCCChHHHHHHHc---CCHHHHHHHHhccCCCCCCCccccc
Q 037168 66 GNTILHETATSNHALPVADKVLRKAPGLLGM------RNNNGETALLRAARY---GKVDIFNFLAGKISGYDHATRLPFL 136 (466)
Q Consensus 66 G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~------~d~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~~~~~~ 136 (466)
+.++||.|+..|+. +.++.|++. +.+++. .|..|+||||+|+.. |+.+++++|++. +++++.
T Consensus 151 ~~~~L~~A~~~g~~-~~v~~ll~~-g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-------gadvn~ 221 (301)
T 2b0o_E 151 EPQRLWTAICNRDL-LSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-------GGHLDA 221 (301)
T ss_dssp CHHHHHHHHHTTCH-HHHHHHHHT-TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH-------SSCTTC
T ss_pred hHHHHhhhhhccCH-HHHHHHHhc-CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc-------CCCCCC
Confidence 45779999999997 899999977 666777 699999999999997 899999999999 678889
Q ss_pred ccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCC
Q 037168 137 HRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGN 216 (466)
Q Consensus 137 ~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~ 216 (466)
+|.+|+|||| .|+..|+.+++++|++ .+++++.+|..|+||||+|+..|+.+++++|+++|++ .|+
T Consensus 222 ~d~~G~TpLh---~A~~~g~~~~v~~Ll~-~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~----------~g~ 287 (301)
T 2b0o_E 222 KAADGNTALH---YAALYNQPDCLKLLLK-GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG----------TFA 287 (301)
T ss_dssp CCTTCCCHHH---HHHHTTCHHHHHHHHH-TTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH----------TTS
T ss_pred CCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC----------CCC
Confidence 9999999999 7778999999999999 8999999999999999999999999999999998864 589
Q ss_pred CchhhhhccCcc
Q 037168 217 TIFHMAGIKRKD 228 (466)
Q Consensus 217 TpLHlAa~~~~~ 228 (466)
||||+|++.|+.
T Consensus 288 tpLh~A~~~g~~ 299 (301)
T 2b0o_E 288 FPLHVDYSWVIS 299 (301)
T ss_dssp SCCC--------
T ss_pred ChhHHHHhcCCc
Confidence 999999988753
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=2.5e-23 Score=191.53 Aligned_cols=131 Identities=18% Similarity=0.129 Sum_probs=77.1
Q ss_pred ccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCC
Q 037168 61 RQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRND 140 (466)
Q Consensus 61 ~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~ 140 (466)
..|..|.||||+|+..|+. ++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.. +.+++.+|.+
T Consensus 68 ~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~------g~~~~~~d~~ 139 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNL-SWLRECLDN-RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQP------NIELNQQNKL 139 (222)
T ss_dssp HHEEEESCHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTST------TCCCCCCCTT
T ss_pred ccccccccccccccccCcH-HHHHHHHhC-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCC------CCCccccCCC
Confidence 3455566666666666664 666666665 4556666666666666666666666666666541 3455566666
Q ss_pred CCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcc
Q 037168 141 KTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIP 203 (466)
Q Consensus 141 g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~ 203 (466)
|+|||| .|+..|+.++++.|++ .+++++.+|..|+||||+|+..++.++++.|++.++.
T Consensus 140 g~tpL~---~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 140 GDTALH---AAAWKGYADIVQLLLA-KGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAV 198 (222)
T ss_dssp SCCHHH---HHHHHTCHHHHHHHHH-HTCCSCCCCTTSCCHHHHCCSHHHHHHHC--------
T ss_pred CCCHHH---HHHHcCCHHHHHHHHH-cCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchh
Confidence 666666 4445566666666666 4666666666666666666666666666666666654
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=6.8e-23 Score=170.38 Aligned_cols=115 Identities=14% Similarity=0.086 Sum_probs=92.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccC
Q 037168 98 NNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDE 177 (466)
Q Consensus 98 d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~ 177 (466)
+..|.||||+|+..|+.+++++|++. +.+++.+|..|+|||| .|+..|+.++++.|++ .+.+++.+|..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~-------~~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~-~g~~~~~~d~~ 72 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAK-------GEDVNRTLEGGRKPLH---YAADCGQLEILEFLLL-KGADINAPDKH 72 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHT-------TCCTTSCCTTSSCHHH---HHHHTTCHHHHHHHHT-TTCCTTCCCTT
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHc-------CCCcCccCCCCCcHHH---HHHHcCCHHHHHHHHH-cCCCCCcCCCC
Confidence 45677888888888888888888887 5567777888888888 6667888888888887 77888888888
Q ss_pred CChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCc
Q 037168 178 GRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRK 227 (466)
Q Consensus 178 G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~ 227 (466)
|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|...+.
T Consensus 73 g~tpL~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~ 118 (123)
T 3aaa_C 73 HITPLLSAVYEGHVSCVKLLLSKGAD----KTVKGPDGLTAFEATDNQAI 118 (123)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHCCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHhCCHHH
Confidence 88888888888888888888888887 78888888888888865443
No 99
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=3.4e-23 Score=184.85 Aligned_cols=165 Identities=16% Similarity=0.098 Sum_probs=133.6
Q ss_pred HHHcCCHHHHHHHHHhCCCCc------hhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHHHH
Q 037168 35 ATYTKKSDLVIKLLDELPDQS------LDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALLRA 108 (466)
Q Consensus 35 A~~~g~~~~v~~Ll~~~~~~~------~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh~A 108 (466)
|++.|..+.+++|++...... .......|.+|+||||+|+..|+. ++++.|++ +.+++.+|..|+||||+|
T Consensus 7 aa~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~--~~~~~~~d~~g~t~L~~A 83 (183)
T 3deo_A 7 GSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADE-QALSQLLE--DRDVDAVDENGRTALLFV 83 (183)
T ss_dssp EEEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCH-HHHHHHTT--TSCTTCCCTTSCCHHHHH
T ss_pred HHHhcCCchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCH-HHHHHHHh--cCCCCCcCCCCCCHHHHH
Confidence 344555555666664321110 111223467899999999999997 99999998 678999999999999999
Q ss_pred HHcCCHHHHHHHHhccCCCCCCCccccccc-CCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHH
Q 037168 109 ARYGKVDIFNFLAGKISGYDHATRLPFLHR-NDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIK 187 (466)
Q Consensus 109 a~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d-~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~ 187 (466)
+..|+.+++++|++. +.+++.+| .+|+|||| .|+..|+.++++.|++ .+++++.+|..|+||||+|++
T Consensus 84 ~~~~~~~~v~~Ll~~-------ga~~~~~~~~~g~tpL~---~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~ 152 (183)
T 3deo_A 84 AGLGSDKCVRLLAEA-------GADLDHRDMRGGLTALH---MAAGYVRPEVVEALVE-LGADIEVEDERGLTALELARE 152 (183)
T ss_dssp HHHTCHHHHHHHHHT-------TCCTTCCCSSSSCCHHH---HHHHTTCHHHHHHHHH-HTCCTTCCCTTSCCHHHHHHH
T ss_pred HHcCCHHHHHHHHHc-------CCCCCcCCCCCCCCHHH---HHHhcCcHHHHHHHHH-cCCCCcCCCCCCCCHHHHHHH
Confidence 999999999999998 66788888 88999999 7778999999999999 689999999999999999987
Q ss_pred cCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhcc
Q 037168 188 YRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKM 234 (466)
Q Consensus 188 ~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l 234 (466)
.++. ..+.|||++|++.+..++++.|
T Consensus 153 ~~~~---------------------~~~~~~l~~a~~~~~~~i~~~L 178 (183)
T 3deo_A 153 ILKT---------------------TPKGNPMQFGRRIGLEKVINVL 178 (183)
T ss_dssp HHHT---------------------CCCCSHHHHHHHHHHHHHHHHH
T ss_pred hccC---------------------cccccHHHHHHHcCHHHHHHHH
Confidence 4322 3567999999999988888665
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=1.2e-22 Score=168.85 Aligned_cols=118 Identities=17% Similarity=0.119 Sum_probs=103.9
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChH
Q 037168 25 TIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETA 104 (466)
Q Consensus 25 ~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tp 104 (466)
+..|+||||.|+..|+.++++.|++ .+.+++.+|..|+||||+|+..|+. +++++|++. +.+++.+|..|+||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~-----~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~d~~g~tp 76 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVA-----KGEDVNRTLEGGRKPLHYAADCGQL-EILEFLLLK-GADINAPDKHHITP 76 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHH-----TTCCTTSCCTTSSCHHHHHHHTTCH-HHHHHHHTT-TCCTTCCCTTSCCH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHH-----cCCCcCccCCCCCcHHHHHHHcCCH-HHHHHHHHc-CCCCCcCCCCCCCH
Confidence 5678999999999999999999999 4556888999999999999999996 999999988 78899999999999
Q ss_pred HHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHH
Q 037168 105 LLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEI 159 (466)
Q Consensus 105 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~ 159 (466)
||+|+..|+.+++++|++. +.+++.+|.+|+|||| .|...+..++
T Consensus 77 L~~A~~~~~~~~v~~Ll~~-------ga~~~~~~~~g~t~l~---~A~~~~~~~l 121 (123)
T 3aaa_C 77 LLSAVYEGHVSCVKLLLSK-------GADKTVKGPDGLTAFE---ATDNQAIKAL 121 (123)
T ss_dssp HHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HCCCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHc-------CCCCCCcCCCCCCHHH---HhCCHHHHHH
Confidence 9999999999999999998 6788899999999999 6655444444
No 101
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.87 E-value=1.7e-22 Score=195.02 Aligned_cols=142 Identities=17% Similarity=0.146 Sum_probs=118.5
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhc------cCCCCChHHHHHHHc---CCcHHHHHHHHHhCCCcccC
Q 037168 26 IHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTR------QNKAGNTILHETATS---NHALPVADKVLRKAPGLLGM 96 (466)
Q Consensus 26 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~------~d~~G~TpLh~Aa~~---g~~~~~v~~Ll~~~~~~~~~ 96 (466)
..+.++||.|+..|+.+.++.|++.+ .+++. .|..|+||||+|+.. |+. +++++|++. +++++.
T Consensus 149 ~~~~~~L~~A~~~g~~~~v~~ll~~g-----~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~-~iv~~Ll~~-gadvn~ 221 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLLSVLEAFANG-----QDFGQPLPGPDAQAPEELVLHLAVKVANQASL-PLVDFIIQN-GGHLDA 221 (301)
T ss_dssp C-CHHHHHHHHHTTCHHHHHHHHHTT-----CCTTSCEECSSSCSCEECHHHHHHHTCCTTTH-HHHHHHHHH-SSCTTC
T ss_pred CchHHHHhhhhhccCHHHHHHHHhcC-----CcccccCCCcccCCCCccHHHHHHHhcccCcH-HHHHHHHhc-CCCCCC
Confidence 33557899999999999999999954 44555 689999999999997 775 999999999 788999
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCccccccc
Q 037168 97 RNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDD 176 (466)
Q Consensus 97 ~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~ 176 (466)
+|.+|+||||+|+..|+.+++++|++. +++++.+|.+|+|||| .|+..|+.+++++|++ .++ .
T Consensus 222 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~-------gad~~~~d~~G~TpL~---~A~~~~~~~iv~~Ll~-~ga------~ 284 (301)
T 2b0o_E 222 KAADGNTALHYAALYNQPDCLKLLLKG-------RALVGTVNEAGETALD---IARKKHHKECEELLEQ-AQA------G 284 (301)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHT-------TCCCSCCCTTSCCHHH---HHHHHTCHHHHHHHHH-HHH------H
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCCcCCCCCCHHH---HHHHcCCHHHHHHHHH-hcC------C
Confidence 999999999999999999999999998 7788999999999999 6778899999999998 343 2
Q ss_pred CCChHHHHHHHcCCh
Q 037168 177 EGRNILHVAIKYRQL 191 (466)
Q Consensus 177 ~G~t~Lh~A~~~~~~ 191 (466)
.|.||||+|+.+|+.
T Consensus 285 ~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 285 TFAFPLHVDYSWVIS 299 (301)
T ss_dssp TTSSCCC--------
T ss_pred CCCChhHHHHhcCCc
Confidence 689999999998864
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.87 E-value=7.7e-23 Score=188.22 Aligned_cols=129 Identities=15% Similarity=0.095 Sum_probs=111.4
Q ss_pred cCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCccccc
Q 037168 95 GMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHI 174 (466)
Q Consensus 95 ~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~ 174 (466)
+..|.+|.||||+|+..|+.+++++|++. +.+++.+|.+|+|||| .|+..|+.++++.|++..+.+++.+
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~~~~~~~~~g~t~L~---~A~~~~~~~~v~~Ll~~~g~~~~~~ 136 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDN-------RVGVNGLDKAGSTALY---WACHGGHKDIVEMLFTQPNIELNQQ 136 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHTTSTTCCCCCC
T ss_pred cccccccccccccccccCcHHHHHHHHhC-------CCCccccCCCCCCHHH---HHHHcCCHHHHHHHHcCCCCCcccc
Confidence 34567899999999999999999999987 6678888999999999 6778899999999998558999999
Q ss_pred ccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhccCcchhhhccCCh
Q 037168 175 DDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIKRKDYVAEKMEGP 237 (466)
Q Consensus 175 d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~~~~~~~~~l~~~ 237 (466)
|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..+..++++.+.+.
T Consensus 137 d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~ 195 (222)
T 3ehr_A 137 NKLGDTALHAAAWKGYADIVQLLLAKGAR----TDLRNIEKKLAFDMATNAACASLLKKKQGT 195 (222)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHHTCC----SCCCCTTSCCHHHHCCSHHHHHHHC-----
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CccccCCCCCHHHHhcchhHHHHHHHHhcc
Confidence 99999999999999999999999999988 889999999999999999988888777543
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=2.3e-21 Score=184.91 Aligned_cols=178 Identities=18% Similarity=0.115 Sum_probs=136.5
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCch-------------hhhh-------------ccCCCCChHHHHHHHcC
Q 037168 24 FTIHDDTVLHMATYTKKSDLVIKLLDELPDQSL-------------DKMT-------------RQNKAGNTILHETATSN 77 (466)
Q Consensus 24 ~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~-------------~~~~-------------~~d~~G~TpLh~Aa~~g 77 (466)
.|..+.++|+.+...|+..+.+.+-...+.... ..+. ..+....++||.|+..|
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~ 141 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR 141 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence 577788999999999998877766544332110 0000 00111236889999999
Q ss_pred CcHHHHHHHHHhCCCc-----ccCcCCCCChHHHHHHHc---CCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHH
Q 037168 78 HALPVADKVLRKAPGL-----LGMRNNNGETALLRAARY---GKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAI 149 (466)
Q Consensus 78 ~~~~~v~~Ll~~~~~~-----~~~~d~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~ 149 (466)
+. +.++.+++.+... ++..|..|+||||+|+.. |+.+++++|++. +++++.+|.+|+||||
T Consensus 142 d~-~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~-------ga~in~~d~~g~TpLh--- 210 (278)
T 1dcq_A 142 DI-FGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN-------SGNLDKQTGKGSTALH--- 210 (278)
T ss_dssp CH-HHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH-------CSCTTCCCTTCCCHHH---
T ss_pred cc-HHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHC-------CCCccccCCCCCCHHH---
Confidence 86 7888888774321 445588899999999998 889999999988 6778888999999999
Q ss_pred HHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCchhhhhcc
Q 037168 150 LSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIFHMAGIK 225 (466)
Q Consensus 150 ~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLHlAa~~ 225 (466)
.|+..|+.++++.|++ .|++++.+|..|+||||+|+..|+.+++++|+++|++ .+++|.++..
T Consensus 211 ~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~------------~~~~~~~v~~ 273 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLR-GKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG------------RFNSHVHVEY 273 (278)
T ss_dssp HHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT------------CCCSSCCCCC
T ss_pred HHHHcCCHHHHHHHHH-cCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------CCCcceeeec
Confidence 6778899999999998 8889999999999999999999999999999988753 5677777654
No 104
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.83 E-value=1.1e-20 Score=186.59 Aligned_cols=150 Identities=14% Similarity=0.111 Sum_probs=116.2
Q ss_pred cCCCCChHHHHHHHc-CCcHHHHHHHHHhCCCcccCcC--CCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCccccccc
Q 037168 62 QNKAGNTILHETATS-NHALPVADKVLRKAPGLLGMRN--NNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHR 138 (466)
Q Consensus 62 ~d~~G~TpLh~Aa~~-g~~~~~v~~Ll~~~~~~~~~~d--~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d 138 (466)
.+..+.|+||.|+.. |+. ++++.|+++ +.+++..| ..|.||||+|+..|+.+++++|+++ +++++.+|
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~-~~v~~LL~~-Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~-------Gadvn~~d 265 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSL-PTMADALAH-GADVNWVNGGQDNATPLIQATAANSLLACEFLLQN-------GANVNQAD 265 (368)
T ss_dssp --CCHHHHHHHHTSSSCCH-HHHHHHHHT-TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCC
T ss_pred ccCCCCcHHHHHHHccCCH-HHHHHHHHc-CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHc-------CCCCCCCC
Confidence 344567899999999 886 999999987 77899888 8999999999999999999999998 67888999
Q ss_pred CCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCc
Q 037168 139 NDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTI 218 (466)
Q Consensus 139 ~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~Tp 218 (466)
.+|+|||| .|+..|+.+++++|++ .+++++.+|..|+||||+|+..|+.+++++|++.+.. .......+..+.|+
T Consensus 266 ~~G~TpLh---~A~~~g~~~~v~~LL~-~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~-~~~~~~~~~~~~t~ 340 (368)
T 3jue_A 266 SAGRGPLH---HATILGHTGLACLFLK-RGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR-EAEAAQGQAGDETY 340 (368)
T ss_dssp TTSCCHHH---HHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------
T ss_pred CCCCCHHH---HHHHcCcHHHHHHHHH-CcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-cccccccCCCCCCH
Confidence 99999999 6778899999999998 7999999999999999999999999999999987643 22245667888999
Q ss_pred hhhhhcc
Q 037168 219 FHMAGIK 225 (466)
Q Consensus 219 LHlAa~~ 225 (466)
++++...
T Consensus 341 l~i~~~~ 347 (368)
T 3jue_A 341 LDIFRDF 347 (368)
T ss_dssp -------
T ss_pred HHHHHHH
Confidence 9988754
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.82 E-value=2.5e-20 Score=184.13 Aligned_cols=148 Identities=11% Similarity=0.112 Sum_probs=114.5
Q ss_pred CCCCCcHHHHHHHc-CCHHHHHHHHHhCCCCchhhhhccC--CCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCC
Q 037168 25 TIHDDTVLHMATYT-KKSDLVIKLLDELPDQSLDKMTRQN--KAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNG 101 (466)
Q Consensus 25 ~~~g~T~Lh~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~~d--~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G 101 (466)
+..+.|+||.|+.. |+.++++.|++ ++++++..| ..|.||||+|+..|+. +++++|++. +++++.+|..|
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~-----~Gadvn~~~~~~~g~TpLh~Aa~~g~~-~iv~~LL~~-Gadvn~~d~~G 268 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALA-----HGADVNWVNGGQDNATPLIQATAANSL-LACEFLLQN-GANVNQADSAG 268 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHH-----TTCCTTCCCTTTTCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTS
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHH-----cCCCCCccccccCCCCHHHHHHHCCCH-HHHHHHHHc-CCCCCCCCCCC
Confidence 34567899999999 99999999999 556677777 8999999999999996 999999998 78899999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHC--CCcccccccCCC
Q 037168 102 ETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVY--PQAVEHIDDEGR 179 (466)
Q Consensus 102 ~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~--~~~~~~~d~~G~ 179 (466)
+||||+|+..|+.+++++|+++ +++++.+|.+|.|||| .|+..|+.+++++|++.. .......+..+.
T Consensus 269 ~TpLh~A~~~g~~~~v~~LL~~-------Gad~~~~d~~G~TpL~---~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~ 338 (368)
T 3jue_A 269 RGPLHHATILGHTGLACLFLKR-------GADLGARDSEGRDPLT---IAMETANADIVTLLRLAKMREAEAAQGQAGDE 338 (368)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHHHHC-------------
T ss_pred CCHHHHHHHcCcHHHHHHHHHC-------cCCCCCcCCCCCCHHH---HHHHCCCHHHHHHHHHcCCCcccccccCCCCC
Confidence 9999999999999999999998 7788999999999999 777899999999999753 233345567788
Q ss_pred hHHHHHHHcC
Q 037168 180 NILHVAIKYR 189 (466)
Q Consensus 180 t~Lh~A~~~~ 189 (466)
|+++++....
T Consensus 339 t~l~i~~~~~ 348 (368)
T 3jue_A 339 TYLDIFRDFS 348 (368)
T ss_dssp ----------
T ss_pred CHHHHHHHHH
Confidence 9988876653
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.82 E-value=4.1e-20 Score=190.80 Aligned_cols=136 Identities=15% Similarity=0.102 Sum_probs=115.7
Q ss_pred CChHHHHHHHcCCcHHHHHHHHHhCCCcccCc------CCCCChHHHHHHH---cCCHHHHHHHHhccCCCCCCCccccc
Q 037168 66 GNTILHETATSNHALPVADKVLRKAPGLLGMR------NNNGETALLRAAR---YGKVDIFNFLAGKISGYDHATRLPFL 136 (466)
Q Consensus 66 G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~------d~~G~tpLh~Aa~---~g~~~~v~~Ll~~~~~~~~~~~~~~~ 136 (466)
..+.||.|+..|+. ++++.|++. +.+++.+ |..|+||||+|+. .|+.+++++|+++ |++++.
T Consensus 132 ~~~~L~~A~~~g~~-~~v~~ll~~-g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~-------ga~vn~ 202 (497)
T 3lvq_E 132 EPQRLWTAICNRDL-LSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-------GGHLDA 202 (497)
T ss_dssp CHHHHHHHHHHTCH-HHHHHHHHT-TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH-------SCCTTC
T ss_pred cHHHHHHHHhccCH-HHHHHHHhh-cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc-------CCCCCc
Confidence 44789999999997 999999998 6778877 8899999999976 8999999999998 778999
Q ss_pred ccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCC
Q 037168 137 HRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGN 216 (466)
Q Consensus 137 ~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~ 216 (466)
+|.+|+|||| .|+..|+.++++.|++ +|++++.+|..|+||||+|+..|+.+++++|+++|++ ++.
T Consensus 203 ~d~~g~TpLh---~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~----~~~------ 268 (497)
T 3lvq_E 203 KAADGNTALH---YAALYNQPDCLKLLLK-GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG----TFA------ 268 (497)
T ss_dssp CCSSSCCHHH---HHTTTTCHHHHHHHHH-TCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--------------
T ss_pred cCCCCCcHHH---HHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCC----CCC------
Confidence 9999999999 7889999999999998 8999999999999999999999999999999999988 544
Q ss_pred Cchhhhhc
Q 037168 217 TIFHMAGI 224 (466)
Q Consensus 217 TpLHlAa~ 224 (466)
||+|.+..
T Consensus 269 ~~~h~~~~ 276 (497)
T 3lvq_E 269 FPLHVDYS 276 (497)
T ss_dssp --------
T ss_pred Ccceeecc
Confidence 57777653
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=6.1e-20 Score=144.55 Aligned_cols=91 Identities=27% Similarity=0.373 Sum_probs=84.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCChHHH
Q 037168 27 HDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGETALL 106 (466)
Q Consensus 27 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~tpLh 106 (466)
+|+||||+|+..|+.+++++|++ .+.+++.+|..|+||||+|+..|+. +++++|++. +.+++.+|.+|+||||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~n~~d~~g~t~L~~A~~~~~~-~~v~~Ll~~-ga~~~~~d~~g~t~l~ 73 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLE-----AGADVNAKDKNGRTPLHLAARNGHL-EVVKLLLEA-GADVNAKDKNGRTPLH 73 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHH-----cCCCCcccCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCccCCCCCCHHH
Confidence 58999999999999999999999 5567899999999999999999996 999999998 7889999999999999
Q ss_pred HHHHcCCHHHHHHHHhcc
Q 037168 107 RAARYGKVDIFNFLAGKI 124 (466)
Q Consensus 107 ~Aa~~g~~~~v~~Ll~~~ 124 (466)
+|+..|+.+++++|++.+
T Consensus 74 ~A~~~~~~~~~~~Ll~~g 91 (93)
T 1n0q_A 74 LAARNGHLEVVKLLLEAG 91 (93)
T ss_dssp HHHHTTCHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHcC
Confidence 999999999999999873
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.81 E-value=6.9e-20 Score=144.21 Aligned_cols=93 Identities=28% Similarity=0.369 Sum_probs=73.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccccCCC
Q 037168 100 NGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDDEGR 179 (466)
Q Consensus 100 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~~G~ 179 (466)
+|+||||+|+..|+.+++++|++. +.+++.+|.+|+|||| .|+..|+.++++.|++ .+.+++.+|..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~n~~d~~g~t~L~---~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~ 69 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEA-------GADVNAKDKNGRTPLH---LAARNGHLEVVKLLLE-AGADVNAKDKNGR 69 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCCCTTSC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc-------CCCCcccCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCCCccCCCCC
Confidence 477888888888888888888877 5677777888888888 6667788888888887 6778888888888
Q ss_pred hHHHHHHHcCChhHHHHHHhcCcc
Q 037168 180 NILHVAIKYRQLEIFERVVQMEIP 203 (466)
Q Consensus 180 t~Lh~A~~~~~~~iv~~Ll~~g~~ 203 (466)
||||+|+..|+.+++++|+++|++
T Consensus 70 t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 70 TPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC
Confidence 888888888888888888887753
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.81 E-value=3.8e-20 Score=151.67 Aligned_cols=109 Identities=24% Similarity=0.232 Sum_probs=89.8
Q ss_pred CcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCcccccc
Q 037168 96 MRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHID 175 (466)
Q Consensus 96 ~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d 175 (466)
.+|.+|+||||+|+..|+.+++++|++. +.+++.+|..|+|||| .|+..|+.++++.|++ .+.+++.+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~d~~g~t~L~---~A~~~~~~~~~~~Ll~-~g~~~~~~d 72 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSK-------GADVNARSKDGNTPLH---LAAKNGHAEIVKLLLA-KGADVNARS 72 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTT-------TCCSSCCCSSSCCTTH---HHHTTTCHHHHHHHTT-TTCCTTCCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCCCcCCCCCCHHH---HHHHcCcHHHHHHHHH-cCCCCcccC
Confidence 4678888888888888888888888887 5667778888888888 6668888888888887 688888888
Q ss_pred cCCChHHHHHHHcCChhHHHHHHhcCcccccccccccCCCCCch
Q 037168 176 DEGRNILHVAIKYRQLEIFERVVQMEIPLRRLVRKIDYNGNTIF 219 (466)
Q Consensus 176 ~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpL 219 (466)
..|+||||+|+..++.+++++|+++|++ +|.+|..|.||-
T Consensus 73 ~~g~tpl~~A~~~~~~~~~~~Ll~~ga~----~n~~~~~~~~~~ 112 (115)
T 2l6b_A 73 KDGNTPEHLAKKNGHHEIVKLLDAKGAD----VNARSWGSSHHH 112 (115)
T ss_dssp TTCCCTTHHHHTTTCHHHHHHHHTTSSS----HHHHSCCCC---
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCC----CCcCCccccccc
Confidence 8888888888888888888888888888 888888888873
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.81 E-value=7.6e-20 Score=188.80 Aligned_cols=138 Identities=17% Similarity=0.162 Sum_probs=113.5
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhcc------CCCCChHHHHHHH---cCCcHHHHHHHHHhCCCcccC
Q 037168 26 IHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQ------NKAGNTILHETAT---SNHALPVADKVLRKAPGLLGM 96 (466)
Q Consensus 26 ~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~------d~~G~TpLh~Aa~---~g~~~~~v~~Ll~~~~~~~~~ 96 (466)
....+.||.|+..|+.+.++.|++.+ .+++.+ |..|.||||+|+. .|+. +++++|++. ++++|.
T Consensus 130 ~~~~~~L~~A~~~g~~~~v~~ll~~g-----~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~-~~v~~Ll~~-ga~vn~ 202 (497)
T 3lvq_E 130 TPEPQRLWTAICNRDLLSVLEAFANG-----QDFGQPLPGPDAQAPEELVLHLAVKVANQASL-PLVDFIIQN-GGHLDA 202 (497)
T ss_dssp C-CHHHHHHHHHHTCHHHHHHHHHTT-----CCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTH-HHHHHHHHH-SCCTTC
T ss_pred cccHHHHHHHHhccCHHHHHHHHhhc-----ccccCCCCCcccccccchHHHHHHHhcccccH-HHHHHHHHc-CCCCCc
Confidence 34457899999999999999999954 455555 8899999999976 8886 999999998 788999
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCccccccc
Q 037168 97 RNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHIDD 176 (466)
Q Consensus 97 ~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~d~ 176 (466)
+|.+|+||||+|+..|+.+++++|+++ |++++.+|.+|+|||| .|+..|+.++++.|++ .+++++.
T Consensus 203 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~-------ga~~~~~d~~g~tpl~---~A~~~~~~~~~~~Ll~-~ga~~~~--- 268 (497)
T 3lvq_E 203 KAADGNTALHYAALYNQPDCLKLLLKG-------RALVGTVNEAGETALD---IARKKHHKECEELLEQ-AQAGTFA--- 268 (497)
T ss_dssp CCSSSCCHHHHHTTTTCHHHHHHHHHT-------CCCCSCCCTTCCCHHH---HHHHTTCHHHHHHHHH-TCC-------
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHc-------CCCCCCcCCCCCCHHH---HHHHcCCHHHHHHHHH-hCCCCCC---
Confidence 999999999999999999999999998 7789999999999999 7778999999999998 7887765
Q ss_pred CCChHHHHHHH
Q 037168 177 EGRNILHVAIK 187 (466)
Q Consensus 177 ~G~t~Lh~A~~ 187 (466)
+|+|.+..
T Consensus 269 ---~~~h~~~~ 276 (497)
T 3lvq_E 269 ---FPLHVDYS 276 (497)
T ss_dssp -----------
T ss_pred ---Ccceeecc
Confidence 57776654
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=4.9e-20 Score=151.01 Aligned_cols=109 Identities=25% Similarity=0.241 Sum_probs=99.2
Q ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCCCCC
Q 037168 23 VFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNNNGE 102 (466)
Q Consensus 23 ~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~~G~ 102 (466)
..|.+|+||||+|+..|+.++++.|++ .+.+++.+|..|.||||+|+..|+. +++++|++. +.+++.+|..|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~-----~g~~~~~~d~~g~t~L~~A~~~~~~-~~~~~Ll~~-g~~~~~~d~~g~ 76 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLS-----KGADVNARSKDGNTPLHLAAKNGHA-EIVKLLLAK-GADVNARSKDGN 76 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTT-----TTCCSSCCCSSSCCTTHHHHTTTCH-HHHHHHTTT-TCCTTCCCTTCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCCHHHHHHHcCcH-HHHHHHHHc-CCCCcccCCCCC
Confidence 468899999999999999999999999 4566888999999999999999996 999999998 778999999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChh
Q 037168 103 TALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVL 145 (466)
Q Consensus 103 tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpL 145 (466)
||||+|+..|+.+++++|+++ +++++.++..|.||-
T Consensus 77 tpl~~A~~~~~~~~~~~Ll~~-------ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 77 TPEHLAKKNGHHEIVKLLDAK-------GADVNARSWGSSHHH 112 (115)
T ss_dssp CTTHHHHTTTCHHHHHHHHTT-------SSSHHHHSCCCC---
T ss_pred CHHHHHHHCCCHHHHHHHHHc-------CCCCCcCCccccccc
Confidence 999999999999999999998 788999999998874
No 112
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.80 E-value=1.8e-19 Score=171.68 Aligned_cols=126 Identities=13% Similarity=0.102 Sum_probs=113.2
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhCCCCchhh-hhccCCCCChHHHHHHHc---CCcHHHHHHHHHhCCCcccCcCCCCChH
Q 037168 29 DTVLHMATYTKKSDLVIKLLDELPDQSLDK-MTRQNKAGNTILHETATS---NHALPVADKVLRKAPGLLGMRNNNGETA 104 (466)
Q Consensus 29 ~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~d~~G~TpLh~Aa~~---g~~~~~v~~Ll~~~~~~~~~~d~~G~tp 104 (466)
.++||.|+..|+.+.++.+++.+.+..... ++..|..|.||||+|+.. |+. +++++|+++ +++++.+|.+|+||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~-~~v~~Ll~~-ga~in~~d~~g~Tp 208 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSL-HIVDFLVQN-SGNLDKQTGKGSTA 208 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTH-HHHHHHHHH-CSCTTCCCTTCCCH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchH-HHHHHHHHC-CCCccccCCCCCCH
Confidence 478999999999999999999766532222 566789999999999999 775 999999999 78899999999999
Q ss_pred HHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHH
Q 037168 105 LLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSV 166 (466)
Q Consensus 105 Lh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~ 166 (466)
||+|+..|+.+++++|++. |++++.+|.+|+|||| .|+..|+.++++.|++.
T Consensus 209 Lh~A~~~g~~~~v~~Ll~~-------gad~~~~d~~g~tpL~---~A~~~~~~~~v~~Ll~~ 260 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLRG-------KASIEIANESGETPLD---IAKRLKHEHCEELLTQA 260 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTSCCHHH---HHHHTTCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHc-------CCCCCCccCCCCCHHH---HHHHcCCHHHHHHHHHc
Confidence 9999999999999999998 7789999999999999 77789999999999984
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.72 E-value=1e-17 Score=136.14 Aligned_cols=94 Identities=21% Similarity=0.181 Sum_probs=83.3
Q ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHhCCCCchhhhhccCCCCChHHHHHHHcCCcHHHHHHHHHhCCCcccCcCC
Q 037168 20 ALYVFTIHDDTVLHMATYTKKSDLVIKLLDELPDQSLDKMTRQNKAGNTILHETATSNHALPVADKVLRKAPGLLGMRNN 99 (466)
Q Consensus 20 ~~~~~~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~v~~Ll~~~~~~~~~~d~ 99 (466)
.....|.+|.||||+|+..|+.++++.|++ .+.+++.+|..|+||||+|+..|+. +++++|++. +.+++.+|.
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~i~~~d~~g~tpLh~A~~~~~~-~~v~~Ll~~-ga~~~~~d~ 88 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMA-----NGADVAAKDKNGSTPLHLAARNGHL-EVVKLLLEA-GADVXAQDK 88 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCT
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHH-----cCCCCCccCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCcccccc
Confidence 356678999999999999999999999999 5567889999999999999999996 999999998 788999999
Q ss_pred CCChHHHHHHHcCCHHHHHHH
Q 037168 100 NGETALLRAARYGKVDIFNFL 120 (466)
Q Consensus 100 ~G~tpLh~Aa~~g~~~~v~~L 120 (466)
.|+||||+|+..|+.+++++|
T Consensus 89 ~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 89 FGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TSCCHHHHHHHHTCHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHh
Confidence 999999999999999999987
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.68 E-value=6.6e-17 Score=131.32 Aligned_cols=92 Identities=23% Similarity=0.261 Sum_probs=46.3
Q ss_pred cCcCCCCChHHHHHHHcCCHHHHHHHHhccCCCCCCCcccccccCCCCChhhHHHHHhhcCcHHHHHHHHHHCCCccccc
Q 037168 95 GMRNNNGETALLRAARYGKVDIFNFLAGKISGYDHATRLPFLHRNDKTNVLHIAILSLHFGCIEIVKDILSVYPQAVEHI 174 (466)
Q Consensus 95 ~~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~~~~~~~d~~g~TpLh~A~~a~~~g~~~~v~~Ll~~~~~~~~~~ 174 (466)
...|.+|.||||+|+..|+.+++++|++. +.+++.+|..|+|||| .|+..|+.++++.|++ .+.+++.+
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~~i~~~d~~g~tpLh---~A~~~~~~~~v~~Ll~-~ga~~~~~ 86 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMAN-------GADVAAKDKNGSTPLH---LAARNGHLEVVKLLLE-AGADVXAQ 86 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHT-------TCCTTCCCTTCCCHHH---HHHHTTCHHHHHHHHH-TTCCTTCC
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHc-------CCCCCccCCCCCCHHH---HHHHcCCHHHHHHHHH-cCCCcccc
Confidence 34445555555555555555555555554 3344445555555555 3444555555555554 45555555
Q ss_pred ccCCChHHHHHHHcCChhHHHHH
Q 037168 175 DDEGRNILHVAIKYRQLEIFERV 197 (466)
Q Consensus 175 d~~G~t~Lh~A~~~~~~~iv~~L 197 (466)
|..|+||||+|+.+|+.+++++|
T Consensus 87 d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 87 DKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ccCCCcHHHHHHHcCCHHHHHHh
Confidence 55555555555555555555543
No 115
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=35.32 E-value=36 Score=32.78 Aligned_cols=16 Identities=6% Similarity=-0.056 Sum_probs=11.4
Q ss_pred CccchHHHHHHHHhCC
Q 037168 2 IKQDEQKVIELCRKVP 17 (466)
Q Consensus 2 ~~g~~~~v~~ll~~~~ 17 (466)
++||...|..++.+++
T Consensus 31 ~e~~~~~ve~y~~~gg 46 (454)
T 3zrh_A 31 VEGDLAAIEAYKSSGG 46 (454)
T ss_dssp HHTCHHHHHHHHTTTC
T ss_pred HcCChhHHHHHHhcCC
Confidence 4677777777777764
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=20.26 E-value=1.5e+02 Score=28.60 Aligned_cols=53 Identities=15% Similarity=0.245 Sum_probs=38.5
Q ss_pred HHHHhhcCcHHHHHHHHHHCCCcc-----------ccc--ccCCChHHHHHHHcCChhHHHHHHhc
Q 037168 148 AILSLHFGCIEIVKDILSVYPQAV-----------EHI--DDEGRNILHVAIKYRQLEIFERVVQM 200 (466)
Q Consensus 148 A~~a~~~g~~~~v~~Ll~~~~~~~-----------~~~--d~~G~t~Lh~A~~~~~~~iv~~Ll~~ 200 (466)
||.....|+...|+.-+..+|+.. |-. -.-|.|.+|+|++..+.+++..|+..
T Consensus 26 ac~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 26 ACVGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HhHHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 556667788888888777444321 111 24699999999999999999999863
Done!