Query 037169
Match_columns 860
No_of_seqs 656 out of 3119
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 15:51:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037169.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037169hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cob_A Kinesin heavy chain-lik 100.0 3.4E-86 1.2E-90 736.1 24.8 331 266-597 4-353 (369)
2 4etp_A Kinesin-like protein KA 100.0 7.5E-85 2.6E-89 734.4 28.8 319 255-575 46-402 (403)
3 3u06_A Protein claret segregat 100.0 7.1E-85 2.4E-89 734.9 28.4 321 255-579 46-391 (412)
4 2vvg_A Kinesin-2; motor protei 100.0 1.2E-83 4.2E-88 711.5 23.8 311 266-579 3-344 (350)
5 2y65_A Kinesin, kinesin heavy 100.0 9.1E-84 3.1E-88 716.2 20.9 314 265-580 9-343 (365)
6 2h58_A Kinesin-like protein KI 100.0 5.4E-83 1.9E-87 702.2 25.8 307 266-572 3-330 (330)
7 2rep_A Kinesin-like protein KI 100.0 2E-83 6.7E-88 715.6 21.0 314 257-570 11-376 (376)
8 3bfn_A Kinesin-like protein KI 100.0 2.6E-83 8.8E-88 715.4 21.7 313 265-579 19-356 (388)
9 3t0q_A AGR253WP; kinesin, alph 100.0 5.4E-83 1.9E-87 707.5 23.8 307 266-574 4-348 (349)
10 1bg2_A Kinesin; motor protein, 100.0 2.9E-83 9.9E-88 703.0 19.5 303 266-570 6-325 (325)
11 1goj_A Kinesin, kinesin heavy 100.0 8E-83 2.8E-87 706.7 22.5 312 266-579 5-339 (355)
12 1t5c_A CENP-E protein, centrom 100.0 1.8E-82 6.1E-87 702.5 24.5 313 266-581 3-339 (349)
13 3lre_A Kinesin-like protein KI 100.0 1.1E-82 3.7E-87 706.1 22.4 301 267-570 10-355 (355)
14 2owm_A Nckin3-434, related to 100.0 3.7E-82 1.3E-86 718.7 24.5 316 265-582 36-425 (443)
15 1f9v_A Kinesin-like protein KA 100.0 3.9E-82 1.3E-86 699.7 21.8 308 266-575 2-346 (347)
16 1x88_A Kinesin-like protein KI 100.0 1.5E-82 5.2E-87 706.0 18.5 311 266-578 7-358 (359)
17 3b6u_A Kinesin-like protein KI 100.0 2.9E-82 1E-86 704.7 19.4 312 266-579 20-362 (372)
18 2zfi_A Kinesin-like protein KI 100.0 1.6E-81 5.4E-86 699.4 22.0 311 266-577 3-361 (366)
19 4a14_A Kinesin, kinesin-like p 100.0 3.6E-81 1.2E-85 692.0 22.6 302 266-568 10-344 (344)
20 3gbj_A KIF13B protein; kinesin 100.0 4.5E-81 1.6E-85 692.9 20.4 303 267-569 1-349 (354)
21 2wbe_C Bipolar kinesin KRP-130 100.0 2E-81 6.8E-86 699.8 16.5 312 265-579 21-370 (373)
22 1ry6_A Internal kinesin; kines 100.0 7.9E-80 2.7E-84 683.5 21.3 304 268-577 1-338 (360)
23 1v8k_A Kinesin-like protein KI 100.0 4.3E-80 1.5E-84 693.2 19.4 308 260-575 64-407 (410)
24 2heh_A KIF2C protein; kinesin, 100.0 6.9E-80 2.4E-84 687.6 19.6 307 259-573 43-385 (387)
25 3nwn_A Kinesin-like protein KI 100.0 6.6E-80 2.2E-84 683.9 18.1 304 264-570 21-359 (359)
26 2nr8_A Kinesin-like protein KI 100.0 2.7E-79 9.3E-84 678.7 19.0 302 266-570 22-358 (358)
27 3dc4_A Kinesin-like protein NO 100.0 1.6E-77 5.5E-82 661.3 17.8 297 264-575 19-340 (344)
28 4h1g_A Maltose binding protein 100.0 1E-73 3.4E-78 689.1 27.1 305 266-572 373-713 (715)
29 2kin_B Kinesin; motor protein, 99.9 7.1E-28 2.4E-32 219.6 4.7 85 496-580 1-86 (100)
30 2o0a_A S.cerevisiae chromosome 99.9 9.8E-28 3.3E-32 252.7 3.3 263 255-573 11-292 (298)
31 3kin_B Kinesin heavy chain; mo 99.9 9.2E-27 3.1E-31 218.9 8.7 81 500-580 1-82 (117)
32 2jwp_A Malectin, MGC80075; sug 99.9 4.4E-22 1.5E-26 199.9 12.6 105 2-108 54-172 (174)
33 3na7_A HP0958; flagellar bioge 96.7 0.11 3.7E-06 54.8 20.6 144 586-731 15-160 (256)
34 3na7_A HP0958; flagellar bioge 95.9 0.42 1.4E-05 50.2 19.3 123 602-733 45-169 (256)
35 2w47_A Lipolytic enzyme, G-D-S 95.9 0.1 3.5E-06 49.9 13.4 94 13-113 42-137 (144)
36 3oja_B Anopheles plasmodium-re 95.9 0.11 3.7E-06 60.6 16.1 28 544-571 391-418 (597)
37 1c1g_A Tropomyosin; contractIl 95.7 1.4 4.7E-05 44.6 22.0 10 721-730 181-190 (284)
38 3o0z_A RHO-associated protein 95.7 0.96 3.3E-05 44.5 19.1 98 588-685 12-109 (168)
39 2dfs_A Myosin-5A; myosin-V, in 95.6 0.27 9.1E-06 61.9 18.9 6 315-320 588-593 (1080)
40 2dfs_A Myosin-5A; myosin-V, in 95.4 0.11 3.9E-06 65.2 14.7 41 695-735 1011-1051(1080)
41 2w3j_A Carbohydrate binding mo 95.2 0.14 4.7E-06 49.3 11.6 92 13-112 41-134 (145)
42 1i84_S Smooth muscle myosin he 94.9 0.081 2.8E-06 67.3 11.3 14 258-271 353-366 (1184)
43 1i84_S Smooth muscle myosin he 94.7 0.047 1.6E-06 69.4 8.3 8 536-543 768-775 (1184)
44 2v71_A Nuclear distribution pr 94.6 0.7 2.4E-05 46.4 14.9 100 145-248 52-155 (189)
45 2fxo_A Myosin heavy chain, car 93.8 3.4 0.00012 38.8 17.4 52 634-685 37-88 (129)
46 3tnu_B Keratin, type II cytosk 93.4 0.37 1.3E-05 45.4 9.8 97 147-250 13-109 (129)
47 3vkg_A Dynein heavy chain, cyt 93.1 3.7 0.00013 56.9 22.3 25 315-341 1296-1321(3245)
48 2v66_B Nuclear distribution pr 93.0 3.1 0.00011 38.2 14.9 97 148-248 2-102 (111)
49 3tnu_A Keratin, type I cytoske 92.9 0.36 1.2E-05 45.7 9.0 97 147-250 15-111 (131)
50 3vkg_A Dynein heavy chain, cyt 92.7 2.8 9.5E-05 58.1 20.1 82 648-731 2017-2101(3245)
51 2vzp_A Aocbm35, EXO-beta-D-glu 92.7 0.69 2.4E-05 42.9 10.5 85 13-104 41-127 (127)
52 3oja_B Anopheles plasmodium-re 92.4 1.5 5E-05 51.0 15.3 39 695-737 543-581 (597)
53 2fxo_A Myosin heavy chain, car 92.4 6.1 0.00021 37.1 16.7 53 627-679 44-96 (129)
54 2v71_A Nuclear distribution pr 92.0 11 0.00037 37.8 22.0 16 582-597 10-25 (189)
55 3u1c_A Tropomyosin alpha-1 cha 91.5 3.9 0.00013 36.9 13.6 9 590-598 10-18 (101)
56 3o0z_A RHO-associated protein 90.6 14 0.00047 36.3 19.4 67 604-670 42-108 (168)
57 4etp_B Spindle POLE BODY-assoc 90.6 1.4 4.7E-05 47.5 11.1 235 256-552 47-310 (333)
58 2efr_A General control protein 90.6 13 0.00045 36.1 19.3 33 693-725 102-134 (155)
59 2w87_A Esterase D, XYL-CBM35; 90.4 1.1 3.6E-05 42.7 9.3 89 13-108 41-132 (139)
60 3u59_A Tropomyosin beta chain; 90.1 5.2 0.00018 36.0 13.0 25 591-615 11-35 (101)
61 2o14_A Hypothetical protein YX 89.9 1.6 5.5E-05 48.2 11.6 80 13-111 78-159 (375)
62 2wz8_A Cellulosome protein doc 89.4 2.6 9E-05 40.8 11.4 92 13-107 49-149 (156)
63 3ghg_A Fibrinogen alpha chain; 87.9 6.2 0.00021 45.0 14.3 12 791-802 257-268 (562)
64 4b4t_K 26S protease regulatory 86.6 3.5 0.00012 46.6 11.7 43 325-367 207-266 (428)
65 3u1c_A Tropomyosin alpha-1 cha 86.4 18 0.00061 32.5 14.7 13 715-727 87-99 (101)
66 1jbk_A CLPB protein; beta barr 81.5 0.52 1.8E-05 44.9 1.8 30 312-341 31-60 (195)
67 3ghg_A Fibrinogen alpha chain; 81.3 22 0.00075 40.6 14.8 14 602-615 63-76 (562)
68 3ol1_A Vimentin; structural ge 81.0 26 0.0009 32.3 13.1 20 694-713 88-107 (119)
69 3u59_A Tropomyosin beta chain; 80.0 33 0.0011 30.7 13.9 14 714-727 86-99 (101)
70 4b4t_J 26S protease regulatory 80.0 4.6 0.00016 45.2 9.0 43 325-367 183-242 (405)
71 1deq_A Fibrinogen (alpha chain 79.2 54 0.0019 36.0 16.6 6 749-754 217-222 (390)
72 2p65_A Hypothetical protein PF 79.1 0.54 1.8E-05 44.8 1.0 30 312-341 31-60 (187)
73 4b4t_L 26S protease subunit RP 78.4 4.7 0.00016 45.6 8.6 43 325-367 216-275 (437)
74 1vec_A ATP-dependent RNA helic 77.7 0.91 3.1E-05 44.6 2.2 26 314-341 32-57 (206)
75 1qde_A EIF4A, translation init 77.6 0.83 2.9E-05 45.6 1.9 25 314-340 43-67 (224)
76 2gxq_A Heat resistant RNA depe 77.5 0.85 2.9E-05 44.8 1.9 26 314-341 30-55 (207)
77 3ec2_A DNA replication protein 76.8 0.35 1.2E-05 47.0 -1.1 18 324-341 38-55 (180)
78 3ol1_A Vimentin; structural ge 76.6 47 0.0016 30.6 15.2 30 699-728 86-115 (119)
79 1f5n_A Interferon-induced guan 76.6 47 0.0016 38.9 16.6 57 669-729 522-582 (592)
80 4gkw_A Spindle assembly abnorm 76.0 52 0.0018 30.8 18.0 6 677-682 102-107 (167)
81 3te6_A Regulatory protein SIR3 76.0 0.63 2.1E-05 50.6 0.5 30 312-341 32-62 (318)
82 3cvf_A Homer-3, homer protein 74.2 13 0.00043 32.2 8.0 50 626-675 22-71 (79)
83 3dkp_A Probable ATP-dependent 74.1 1.2 4.1E-05 45.2 2.1 26 314-341 58-83 (245)
84 2qgz_A Helicase loader, putati 73.6 0.98 3.3E-05 48.5 1.2 19 324-342 152-170 (308)
85 3cve_A Homer protein homolog 1 73.6 26 0.00087 29.7 9.6 50 626-675 16-65 (72)
86 3bor_A Human initiation factor 73.6 0.81 2.8E-05 46.6 0.6 26 314-341 59-84 (237)
87 1p9r_A General secretion pathw 72.7 1.4 4.9E-05 49.5 2.4 28 314-341 157-184 (418)
88 2w58_A DNAI, primosome compone 72.3 1.1 3.8E-05 44.0 1.2 17 325-341 55-71 (202)
89 2ocy_A RAB guanine nucleotide 71.9 75 0.0026 30.8 17.5 26 712-737 113-138 (154)
90 2pl3_A Probable ATP-dependent 71.9 1.5 5.1E-05 44.3 2.1 26 314-341 54-79 (236)
91 2kjq_A DNAA-related protein; s 71.8 1.3 4.5E-05 42.2 1.5 17 325-341 37-53 (149)
92 1t6n_A Probable ATP-dependent 71.4 1.5 5.1E-05 43.7 1.9 26 314-341 43-68 (220)
93 3iuy_A Probable ATP-dependent 71.3 1.6 5.3E-05 43.9 2.0 26 314-341 49-74 (228)
94 2efr_A General control protein 71.2 78 0.0027 30.7 18.2 53 633-685 58-110 (155)
95 3jvv_A Twitching mobility prot 70.9 1.5 5E-05 48.3 1.9 29 313-341 112-140 (356)
96 3mq7_A Bone marrow stromal ant 70.1 67 0.0023 29.5 12.2 8 162-169 20-27 (121)
97 1wrb_A DJVLGB; RNA helicase, D 69.8 1.6 5.6E-05 44.5 1.9 26 314-341 52-77 (253)
98 2eqb_B RAB guanine nucleotide 69.8 62 0.0021 28.9 14.0 53 630-682 11-63 (97)
99 3b6e_A Interferon-induced heli 69.6 0.86 3E-05 44.8 -0.3 26 314-341 40-65 (216)
100 3ly5_A ATP-dependent RNA helic 69.6 1.3 4.3E-05 46.1 0.9 26 314-341 83-108 (262)
101 1m1j_B Fibrinogen beta chain; 69.0 94 0.0032 35.3 16.0 17 788-804 294-310 (464)
102 2v4h_A NF-kappa-B essential mo 69.0 69 0.0024 29.2 12.8 20 717-736 86-105 (110)
103 1m1j_B Fibrinogen beta chain; 68.7 82 0.0028 35.7 15.5 24 718-741 179-202 (464)
104 2chg_A Replication factor C sm 68.4 1.6 5.4E-05 42.5 1.3 22 320-341 34-55 (226)
105 2oxc_A Probable ATP-dependent 67.8 1.9 6.6E-05 43.4 1.9 25 314-340 53-77 (230)
106 3bos_A Putative DNA replicatio 67.5 1.8 6.3E-05 42.9 1.7 26 316-341 43-69 (242)
107 3ber_A Probable ATP-dependent 67.4 2 6.9E-05 44.2 1.9 26 314-341 72-97 (249)
108 2v4h_A NF-kappa-B essential mo 67.2 35 0.0012 31.2 9.6 40 143-182 25-64 (110)
109 3eiq_A Eukaryotic initiation f 67.2 2.1 7.2E-05 46.5 2.1 26 314-341 69-94 (414)
110 3swk_A Vimentin; cytoskeleton, 66.6 35 0.0012 29.8 9.4 34 209-242 46-82 (86)
111 3fe2_A Probable ATP-dependent 66.4 2.1 7.2E-05 43.5 1.9 26 314-341 58-83 (242)
112 3hnw_A Uncharacterized protein 65.8 31 0.001 32.8 9.6 6 566-571 40-45 (138)
113 2eyu_A Twitching motility prot 65.7 2.4 8.4E-05 44.3 2.2 28 314-341 15-42 (261)
114 3fmo_B ATP-dependent RNA helic 65.7 2 6.8E-05 45.7 1.5 28 314-341 121-148 (300)
115 3llm_A ATP-dependent RNA helic 65.5 2.1 7E-05 43.5 1.6 26 314-341 68-93 (235)
116 3mq9_A Bone marrow stromal ant 64.7 1.4E+02 0.0049 33.1 16.8 17 546-562 279-295 (471)
117 3vp9_A General transcriptional 63.9 22 0.00075 31.6 7.5 48 676-725 39-86 (92)
118 3iyk_A VP5; icosahedral virus; 63.6 1.7E+02 0.0056 33.4 16.2 23 696-718 189-211 (526)
119 1d2n_A N-ethylmaleimide-sensit 63.5 2.7 9.4E-05 43.4 2.1 21 321-341 61-81 (272)
120 2bgo_A Endo-B1,4-mannanase 5C; 63.5 54 0.0018 31.3 10.7 88 13-113 38-128 (140)
121 3swk_A Vimentin; cytoskeleton, 62.8 36 0.0012 29.7 8.8 13 585-597 3-15 (86)
122 1q0u_A Bstdead; DEAD protein, 62.6 1.7 5.7E-05 43.4 0.2 26 314-341 33-58 (219)
123 3nmd_A CGMP dependent protein 62.3 19 0.00064 30.5 6.5 27 631-657 40-66 (72)
124 1f5n_A Interferon-induced guan 62.2 84 0.0029 36.8 14.5 29 312-341 27-55 (592)
125 1tue_A Replication protein E1; 62.1 2 6.7E-05 44.0 0.6 26 316-341 48-75 (212)
126 1deq_A Fibrinogen (alpha chain 61.6 1E+02 0.0035 33.9 13.8 15 147-161 65-79 (390)
127 3uk6_A RUVB-like 2; hexameric 61.6 2.5 8.5E-05 45.5 1.4 28 314-341 58-87 (368)
128 2qz4_A Paraplegin; AAA+, SPG7, 61.4 2.3 7.7E-05 43.3 0.9 19 323-341 38-56 (262)
129 3hnw_A Uncharacterized protein 61.3 40 0.0014 32.0 9.5 13 143-155 33-45 (138)
130 3n70_A Transport activator; si 61.3 2.5 8.5E-05 39.6 1.1 20 322-341 22-41 (145)
131 2j0s_A ATP-dependent RNA helic 61.3 2.9 0.0001 45.5 1.9 26 314-341 66-91 (410)
132 1ic2_A Tropomyosin alpha chain 60.7 47 0.0016 28.4 9.1 36 147-182 4-39 (81)
133 2ewv_A Twitching motility prot 60.5 3.2 0.00011 45.8 2.0 28 314-341 126-153 (372)
134 1ixz_A ATP-dependent metallopr 60.5 2.1 7.3E-05 43.7 0.5 15 327-341 52-66 (254)
135 3fmp_B ATP-dependent RNA helic 60.4 3.1 0.00011 46.7 2.0 27 314-340 121-147 (479)
136 3tnu_B Keratin, type II cytosk 60.3 1.1E+02 0.0037 28.4 12.5 16 164-179 37-52 (129)
137 2jee_A YIIU; FTSZ, septum, coi 60.3 56 0.0019 28.3 9.2 30 142-171 6-35 (81)
138 3bas_A Myosin heavy chain, str 60.2 82 0.0028 27.4 10.7 25 661-685 58-82 (89)
139 3oja_A Leucine-rich immune mol 60.0 2E+02 0.0068 32.1 16.9 10 471-480 238-247 (487)
140 3syl_A Protein CBBX; photosynt 59.9 3.2 0.00011 43.5 1.8 20 322-341 65-84 (309)
141 3fht_A ATP-dependent RNA helic 59.6 3.2 0.00011 44.9 1.8 28 314-341 54-81 (412)
142 2z0m_A 337AA long hypothetical 59.2 3.4 0.00012 43.3 1.9 26 314-341 23-48 (337)
143 3pey_A ATP-dependent RNA helic 59.2 3.1 0.00011 44.5 1.6 28 314-341 34-61 (395)
144 1l8q_A Chromosomal replication 58.9 2.3 8E-05 45.2 0.5 17 325-341 38-54 (324)
145 4b4t_M 26S protease regulatory 58.9 5.1 0.00017 45.3 3.3 43 325-367 216-275 (434)
146 1u0j_A DNA replication protein 58.7 3.8 0.00013 43.3 2.1 30 312-341 89-121 (267)
147 3oja_A Leucine-rich immune mol 58.5 1.1E+02 0.0037 34.3 14.4 53 203-255 415-467 (487)
148 1g8p_A Magnesium-chelatase 38 58.3 2.9 9.8E-05 44.6 1.1 25 317-341 38-62 (350)
149 1s2m_A Putative ATP-dependent 58.3 3.2 0.00011 45.0 1.5 26 314-341 50-75 (400)
150 2fz4_A DNA repair protein RAD2 58.2 3.3 0.00011 42.3 1.6 26 315-342 101-126 (237)
151 3co5_A Putative two-component 58.1 2.5 8.7E-05 39.5 0.6 27 315-342 19-45 (143)
152 2i4i_A ATP-dependent RNA helic 56.9 3.9 0.00013 44.4 1.9 26 314-341 44-69 (417)
153 1lv7_A FTSH; alpha/beta domain 56.4 3 0.0001 42.7 0.8 18 324-341 45-62 (257)
154 3h4m_A Proteasome-activating n 56.4 2.9 0.0001 43.3 0.8 19 323-341 50-68 (285)
155 1fxk_C Protein (prefoldin); ar 56.2 1.2E+02 0.0042 27.8 12.7 44 688-735 87-130 (133)
156 2v1u_A Cell division control p 56.1 3.2 0.00011 44.5 1.1 20 322-341 42-61 (387)
157 1rif_A DAR protein, DNA helica 56.0 2.9 9.9E-05 43.5 0.7 27 314-342 120-146 (282)
158 1ofh_A ATP-dependent HSL prote 54.8 3 0.0001 43.4 0.5 18 324-341 50-67 (310)
159 2jlq_A Serine protease subunit 54.7 3.6 0.00012 46.3 1.2 26 314-340 10-35 (451)
160 2qby_B CDC6 homolog 3, cell di 54.6 4.2 0.00014 43.8 1.6 30 312-341 32-62 (384)
161 2i1j_A Moesin; FERM, coiled-co 54.5 8.5 0.00029 45.0 4.3 107 631-737 342-456 (575)
162 3t15_A Ribulose bisphosphate c 54.4 3.4 0.00011 43.8 0.8 17 325-341 37-53 (293)
163 3cf0_A Transitional endoplasmi 54.3 3.3 0.00011 43.8 0.8 18 324-341 49-66 (301)
164 1njg_A DNA polymerase III subu 54.0 3.5 0.00012 40.4 0.8 17 325-341 46-62 (250)
165 1sxj_D Activator 1 41 kDa subu 53.9 3.7 0.00013 43.7 1.1 28 314-341 48-75 (353)
166 3h1t_A Type I site-specific re 53.9 4.3 0.00015 47.0 1.7 29 313-342 188-216 (590)
167 3oiy_A Reverse gyrase helicase 53.9 4.5 0.00015 44.3 1.8 26 314-341 28-53 (414)
168 1fnn_A CDC6P, cell division co 53.4 3.3 0.00011 44.5 0.6 30 312-341 29-61 (389)
169 3b9p_A CG5977-PA, isoform A; A 53.1 3.6 0.00012 42.9 0.8 18 324-341 54-71 (297)
170 3a7p_A Autophagy protein 16; c 53.1 1.5E+02 0.0051 28.6 11.8 44 143-186 69-112 (152)
171 3fho_A ATP-dependent RNA helic 52.9 4.8 0.00017 45.9 1.9 28 314-341 148-175 (508)
172 1iy2_A ATP-dependent metallopr 52.8 3.4 0.00012 43.0 0.5 15 327-341 76-90 (278)
173 1xti_A Probable ATP-dependent 52.3 5 0.00017 43.1 1.8 26 314-341 37-62 (391)
174 2oap_1 GSPE-2, type II secreti 52.3 4.6 0.00016 46.6 1.5 21 320-342 258-278 (511)
175 2z4s_A Chromosomal replication 52.0 3.5 0.00012 46.4 0.5 17 325-341 131-147 (440)
176 2r62_A Cell division protease 51.9 2.4 8.3E-05 43.6 -0.8 17 325-341 45-61 (268)
177 3eie_A Vacuolar protein sortin 51.3 4 0.00014 43.6 0.8 17 325-341 52-68 (322)
178 1sxj_C Activator 1 40 kDa subu 51.0 4.7 0.00016 43.2 1.3 25 317-341 39-63 (340)
179 4b3f_X DNA-binding protein smu 51.0 5 0.00017 47.4 1.6 28 314-342 196-223 (646)
180 2db3_A ATP-dependent RNA helic 50.8 5.5 0.00019 44.3 1.9 26 314-341 85-110 (434)
181 3i5x_A ATP-dependent RNA helic 50.7 6.6 0.00023 44.9 2.6 27 314-340 101-127 (563)
182 2c9o_A RUVB-like 1; hexameric 50.6 5.2 0.00018 45.1 1.6 30 312-341 49-80 (456)
183 2oto_A M protein; helical coil 50.3 1.7E+02 0.006 27.8 18.4 10 719-728 143-152 (155)
184 1xwi_A SKD1 protein; VPS4B, AA 50.2 4.3 0.00015 43.6 0.8 17 325-341 46-62 (322)
185 4b4t_I 26S protease regulatory 49.0 10 0.00035 42.8 3.7 44 324-367 216-276 (437)
186 2cdp_A Beta-agarase 1; carbohy 48.9 1.4E+02 0.0049 28.4 11.5 84 13-105 69-159 (160)
187 2v1x_A ATP-dependent DNA helic 48.8 7.7 0.00026 45.4 2.8 27 313-341 50-76 (591)
188 1gk4_A Vimentin; intermediate 48.6 58 0.002 28.1 7.7 44 206-249 16-59 (84)
189 4a2p_A RIG-I, retinoic acid in 48.5 6.6 0.00022 44.4 2.1 26 314-341 14-39 (556)
190 1fuu_A Yeast initiation factor 48.3 3.7 0.00013 44.1 -0.0 26 314-341 50-75 (394)
191 1n0w_A DNA repair protein RAD5 48.2 6.3 0.00021 39.4 1.7 30 312-341 9-41 (243)
192 3vp9_A General transcriptional 48.0 52 0.0018 29.2 7.2 71 586-659 11-82 (92)
193 2bjv_A PSP operon transcriptio 47.8 4.6 0.00016 41.5 0.6 19 323-341 28-46 (265)
194 4b4t_H 26S protease regulatory 47.7 8.7 0.0003 43.8 2.9 44 324-367 243-303 (467)
195 1iqp_A RFCS; clamp loader, ext 47.6 5.8 0.0002 41.5 1.3 21 321-341 43-63 (327)
196 3jsv_C NF-kappa-B essential mo 47.4 1.1E+02 0.0038 27.1 9.2 21 717-737 64-84 (94)
197 4fcw_A Chaperone protein CLPB; 47.4 5.4 0.00019 41.6 1.1 17 325-341 48-64 (311)
198 3pvs_A Replication-associated 47.1 6.1 0.00021 44.6 1.5 29 313-341 39-67 (447)
199 1in4_A RUVB, holliday junction 46.7 4.8 0.00016 43.3 0.5 16 326-341 53-68 (334)
200 3tbk_A RIG-I helicase domain; 46.1 7.5 0.00026 43.7 2.1 26 314-341 11-36 (555)
201 3lw7_A Adenylate kinase relate 45.6 6.2 0.00021 36.8 1.1 16 326-341 3-18 (179)
202 4gp7_A Metallophosphoesterase; 45.6 5.7 0.00019 38.3 0.8 18 325-342 10-27 (171)
203 3mq9_A Bone marrow stromal ant 45.2 2.6E+02 0.0089 31.0 14.7 7 101-107 277-283 (471)
204 1x79_B RAB GTPase binding effe 44.9 1.9E+02 0.0063 26.5 11.6 33 206-238 60-92 (112)
205 1hv8_A Putative ATP-dependent 44.8 6.7 0.00023 41.4 1.3 26 315-341 36-61 (367)
206 4gl2_A Interferon-induced heli 44.4 7.8 0.00027 45.6 1.9 26 314-341 14-39 (699)
207 3b85_A Phosphate starvation-in 44.3 8.7 0.0003 38.7 2.0 26 314-341 14-39 (208)
208 2w0m_A SSO2452; RECA, SSPF, un 44.1 7.5 0.00026 38.3 1.5 29 313-341 9-40 (235)
209 2zqm_A Prefoldin beta subunit 44.1 1.7E+02 0.0059 25.9 13.1 15 693-707 74-88 (117)
210 1m1j_C Fibrinogen gamma chain; 43.6 2.5E+02 0.0084 31.3 13.7 15 788-802 224-238 (409)
211 2gza_A Type IV secretion syste 43.6 7.4 0.00025 42.6 1.4 20 320-341 173-192 (361)
212 1w5s_A Origin recognition comp 43.6 8.4 0.00029 41.7 1.9 29 313-341 35-69 (412)
213 2x8a_A Nuclear valosin-contain 43.6 5.9 0.0002 41.5 0.6 15 327-341 47-61 (274)
214 2cvh_A DNA repair and recombin 43.4 8.4 0.00029 37.8 1.7 29 313-341 6-37 (220)
215 2fwr_A DNA repair protein RAD2 43.2 8.2 0.00028 43.0 1.8 26 314-341 100-125 (472)
216 2qby_A CDC6 homolog 1, cell di 42.7 5.9 0.0002 42.2 0.5 20 322-341 43-62 (386)
217 2chq_A Replication factor C sm 42.7 5.2 0.00018 41.6 0.0 21 321-341 35-55 (319)
218 3qh9_A Liprin-beta-2; coiled-c 42.6 1.6E+02 0.0053 25.5 9.1 36 700-739 44-79 (81)
219 3pfi_A Holliday junction ATP-d 42.2 7.9 0.00027 41.1 1.4 20 322-341 53-72 (338)
220 1w36_D RECD, exodeoxyribonucle 42.1 6.3 0.00022 46.3 0.6 25 316-342 158-182 (608)
221 3sqw_A ATP-dependent RNA helic 42.1 11 0.00037 43.6 2.6 27 314-340 50-76 (579)
222 4h22_A Leucine-rich repeat fli 42.0 1.4E+02 0.0049 26.9 9.2 16 668-683 67-82 (103)
223 3tau_A Guanylate kinase, GMP k 41.9 7 0.00024 38.9 0.8 17 325-341 9-25 (208)
224 1hqc_A RUVB; extended AAA-ATPa 41.9 6.3 0.00021 41.4 0.5 20 322-341 36-55 (324)
225 2e7s_A RAB guanine nucleotide 41.9 72 0.0025 30.2 7.6 17 664-680 65-81 (135)
226 4a74_A DNA repair and recombin 41.8 10 0.00035 37.4 2.1 30 312-341 10-42 (231)
227 1um8_A ATP-dependent CLP prote 41.8 6.6 0.00023 42.7 0.7 17 325-341 73-89 (376)
228 3u61_B DNA polymerase accessor 41.8 6.9 0.00024 41.3 0.8 17 325-341 49-65 (324)
229 3d8b_A Fidgetin-like protein 1 41.8 7.2 0.00025 42.4 1.0 20 322-341 115-134 (357)
230 3tr0_A Guanylate kinase, GMP k 41.7 7.1 0.00024 38.0 0.8 16 326-341 9-24 (205)
231 1x8y_A Lamin A/C; structural p 41.4 75 0.0026 27.5 7.3 43 207-249 19-61 (86)
232 1gvn_B Zeta; postsegregational 41.2 13 0.00043 39.3 2.8 29 313-341 17-50 (287)
233 2qp9_X Vacuolar protein sortin 41.0 6.7 0.00023 42.6 0.6 17 325-341 85-101 (355)
234 3qh9_A Liprin-beta-2; coiled-c 40.8 1.4E+02 0.0047 25.8 8.4 42 634-682 29-70 (81)
235 2i1j_A Moesin; FERM, coiled-co 40.5 14 0.00046 43.3 3.1 12 580-591 298-309 (575)
236 2e7s_A RAB guanine nucleotide 40.2 1.2E+02 0.0043 28.6 9.0 14 694-707 101-114 (135)
237 1sxj_E Activator 1 40 kDa subu 40.2 7.9 0.00027 41.3 1.0 15 327-341 39-53 (354)
238 3hws_A ATP-dependent CLP prote 40.0 7.3 0.00025 42.1 0.7 17 325-341 52-68 (363)
239 1sxj_B Activator 1 37 kDa subu 39.9 9.1 0.00031 39.8 1.4 27 315-341 33-59 (323)
240 2r8r_A Sensor protein; KDPD, P 39.8 7.2 0.00025 40.3 0.5 19 324-342 6-24 (228)
241 1kgd_A CASK, peripheral plasma 39.8 7.8 0.00027 37.5 0.8 16 326-341 7-22 (180)
242 2ykg_A Probable ATP-dependent 39.6 11 0.00036 44.4 2.0 26 314-341 20-45 (696)
243 3vfd_A Spastin; ATPase, microt 39.6 7.8 0.00027 42.5 0.8 18 324-341 148-165 (389)
244 2r44_A Uncharacterized protein 39.5 4.9 0.00017 42.7 -0.8 23 317-341 41-63 (331)
245 4ag6_A VIRB4 ATPase, type IV s 39.3 6.8 0.00023 42.9 0.3 18 324-341 35-52 (392)
246 3pxg_A Negative regulator of g 39.3 9.9 0.00034 43.0 1.6 30 312-341 189-218 (468)
247 2dr3_A UPF0273 protein PH0284; 39.2 10 0.00036 37.8 1.6 29 313-341 9-40 (247)
248 1ly1_A Polynucleotide kinase; 38.8 9 0.00031 36.2 1.0 16 325-340 3-18 (181)
249 3ghg_C Fibrinogen gamma chain; 38.5 2.2E+02 0.0074 31.8 12.1 26 718-743 116-141 (411)
250 3iv1_A Tumor susceptibility ge 38.4 1.9E+02 0.0065 24.8 11.0 10 666-675 46-55 (78)
251 1zp6_A Hypothetical protein AT 38.3 8.3 0.00028 37.1 0.7 17 325-341 10-26 (191)
252 2zan_A Vacuolar protein sortin 38.2 8.3 0.00028 43.3 0.8 17 325-341 168-184 (444)
253 3vmx_A Voltage-gated hydrogen 38.1 75 0.0026 24.8 5.8 39 134-172 2-41 (48)
254 2gk6_A Regulator of nonsense t 37.8 11 0.00037 44.4 1.7 27 314-342 187-213 (624)
255 3trf_A Shikimate kinase, SK; a 37.6 9.6 0.00033 36.5 1.0 15 326-340 7-21 (185)
256 1ojl_A Transcriptional regulat 37.6 8.8 0.0003 40.8 0.8 20 322-341 23-42 (304)
257 1wp9_A ATP-dependent RNA helic 37.5 10 0.00036 41.2 1.4 26 314-342 16-41 (494)
258 2b8t_A Thymidine kinase; deoxy 37.2 8.3 0.00028 39.5 0.5 19 324-342 12-30 (223)
259 1qhx_A CPT, protein (chloramph 37.1 9.9 0.00034 36.1 1.0 17 325-341 4-20 (178)
260 1lq7_A Alpha3W; three helix bu 37.1 1.2E+02 0.004 24.1 6.8 39 670-708 6-44 (67)
261 3a00_A Guanylate kinase, GMP k 37.0 7.9 0.00027 37.6 0.3 15 327-341 4-18 (186)
262 3mx7_A FAS apoptotic inhibitor 36.9 2E+02 0.0068 25.3 9.2 76 13-104 6-81 (90)
263 1e9r_A Conjugal transfer prote 36.9 8.1 0.00028 42.9 0.4 18 324-341 53-70 (437)
264 2k48_A Nucleoprotein; viral pr 36.9 2.4E+02 0.0081 25.5 10.0 19 665-683 81-99 (107)
265 1rz3_A Hypothetical protein rb 36.5 14 0.00047 36.4 2.0 28 314-341 9-39 (201)
266 3c8u_A Fructokinase; YP_612366 36.5 13 0.00046 36.6 1.9 20 322-341 20-39 (208)
267 3m91_A Proteasome-associated A 36.4 81 0.0028 24.9 6.0 35 153-187 13-47 (51)
268 2xzr_A Immunoglobulin-binding 36.4 2.3E+02 0.0078 25.1 13.5 9 646-654 63-71 (114)
269 3mq7_A Bone marrow stromal ant 36.4 2.6E+02 0.0088 25.7 12.5 13 697-709 72-84 (121)
270 2qag_C Septin-7; cell cycle, c 36.2 9.7 0.00033 42.7 0.9 23 319-341 26-48 (418)
271 1rj9_A FTSY, signal recognitio 36.1 10 0.00034 40.6 1.0 16 326-341 104-119 (304)
272 2orw_A Thymidine kinase; TMTK, 35.8 7.9 0.00027 38.1 0.1 17 326-342 5-21 (184)
273 1lvg_A Guanylate kinase, GMP k 35.8 8.6 0.00029 38.0 0.3 16 326-341 6-21 (198)
274 2oca_A DAR protein, ATP-depend 35.8 9.4 0.00032 43.0 0.7 27 314-342 120-146 (510)
275 2j41_A Guanylate kinase; GMP, 35.7 10 0.00034 36.9 0.8 16 326-341 8-23 (207)
276 3cve_A Homer protein homolog 1 35.5 2E+02 0.0069 24.3 9.8 37 150-186 8-44 (72)
277 1oyw_A RECQ helicase, ATP-depe 35.4 8 0.00027 44.4 0.0 26 314-341 32-57 (523)
278 3etw_A Adhesin A; antiparallel 35.4 2.7E+02 0.0093 25.7 11.3 14 723-736 84-97 (119)
279 3b9q_A Chloroplast SRP recepto 35.2 12 0.00041 39.9 1.4 17 325-341 101-117 (302)
280 1ye8_A Protein THEP1, hypothet 35.1 10 0.00035 37.1 0.8 15 327-341 3-17 (178)
281 2qnr_A Septin-2, protein NEDD5 35.1 10 0.00034 40.3 0.8 24 318-341 12-35 (301)
282 2q6q_A Spindle POLE BODY compo 35.0 1.9E+02 0.0064 24.1 8.0 11 631-641 10-20 (74)
283 3hu3_A Transitional endoplasmi 34.9 9.9 0.00034 43.5 0.7 20 322-341 236-255 (489)
284 2bdt_A BH3686; alpha-beta prot 34.7 10 0.00036 36.5 0.8 16 326-341 4-19 (189)
285 4a4z_A Antiviral helicase SKI2 34.7 15 0.0005 45.9 2.2 25 314-340 46-70 (997)
286 3upu_A ATP-dependent DNA helic 34.5 15 0.0005 41.4 2.0 17 325-341 46-62 (459)
287 3lnc_A Guanylate kinase, GMP k 34.0 12 0.00042 37.4 1.2 16 326-341 29-44 (231)
288 3lfu_A DNA helicase II; SF1 he 33.9 9.1 0.00031 44.6 0.2 26 317-342 15-40 (647)
289 3iij_A Coilin-interacting nucl 33.9 11 0.00038 36.0 0.8 16 326-341 13-28 (180)
290 3uie_A Adenylyl-sulfate kinase 33.6 16 0.00053 35.8 1.8 19 323-341 24-42 (200)
291 1m1j_A Fibrinogen alpha subuni 33.6 5.6E+02 0.019 28.8 15.6 18 602-619 64-81 (491)
292 2ehv_A Hypothetical protein PH 33.5 11 0.00038 37.6 0.8 18 325-342 31-48 (251)
293 1x79_B RAB GTPase binding effe 33.5 2.8E+02 0.0096 25.3 12.9 34 694-727 50-83 (112)
294 4a2q_A RIG-I, retinoic acid in 33.3 15 0.00052 44.2 2.1 26 314-341 255-280 (797)
295 1fxk_A Prefoldin; archaeal pro 33.2 2.4E+02 0.0083 24.5 12.2 8 724-731 89-96 (107)
296 2px0_A Flagellar biosynthesis 33.2 11 0.00037 40.1 0.6 16 326-341 107-122 (296)
297 2k48_A Nucleoprotein; viral pr 32.8 2.2E+02 0.0075 25.7 8.8 16 224-239 83-98 (107)
298 4a2w_A RIG-I, retinoic acid in 32.8 15 0.00052 45.3 1.9 26 314-341 255-280 (936)
299 1sxj_A Activator 1 95 kDa subu 32.5 12 0.0004 42.9 0.8 17 325-341 78-94 (516)
300 3vaa_A Shikimate kinase, SK; s 32.5 13 0.00045 36.4 1.1 16 326-341 27-42 (199)
301 3iox_A AGI/II, PA; alpha helix 32.2 5.9E+02 0.02 29.0 14.3 34 145-178 12-45 (497)
302 1jr3_A DNA polymerase III subu 32.2 12 0.00041 40.0 0.8 18 324-341 38-55 (373)
303 1kht_A Adenylate kinase; phosp 32.2 13 0.00046 35.4 1.0 17 325-341 4-20 (192)
304 3sop_A Neuronal-specific septi 32.2 12 0.00042 39.1 0.9 19 323-341 1-19 (270)
305 1znw_A Guanylate kinase, GMP k 32.1 12 0.00042 36.9 0.8 21 319-341 17-37 (207)
306 3s84_A Apolipoprotein A-IV; fo 31.9 4.6E+02 0.016 27.3 19.7 11 698-708 178-188 (273)
307 3i00_A HIP-I, huntingtin-inter 31.8 1.6E+02 0.0054 27.2 8.2 21 664-684 13-33 (120)
308 2v6i_A RNA helicase; membrane, 31.8 16 0.00053 40.8 1.7 16 326-341 4-19 (431)
309 1l8d_A DNA double-strand break 31.7 2.7E+02 0.0092 24.6 12.8 17 720-736 84-100 (112)
310 2ze6_A Isopentenyl transferase 31.7 13 0.00046 38.2 1.0 15 326-340 3-17 (253)
311 3s4r_A Vimentin; alpha-helix, 31.6 2.7E+02 0.0091 24.4 10.5 28 221-248 54-81 (93)
312 3kb2_A SPBC2 prophage-derived 31.0 14 0.00049 34.5 1.0 16 326-341 3-18 (173)
313 2pt7_A CAG-ALFA; ATPase, prote 30.7 11 0.00039 40.6 0.3 19 321-341 170-188 (330)
314 1uf9_A TT1252 protein; P-loop, 30.6 17 0.00057 35.1 1.5 21 321-341 5-25 (203)
315 3efg_A Protein SLYX homolog; x 30.6 1E+02 0.0034 26.4 6.1 10 632-641 15-24 (78)
316 3e70_C DPA, signal recognition 30.6 16 0.00055 39.5 1.4 18 324-341 129-146 (328)
317 1xx6_A Thymidine kinase; NESG, 30.6 11 0.00036 37.7 -0.0 17 326-342 10-26 (191)
318 2i3b_A HCR-ntpase, human cance 30.6 12 0.0004 37.1 0.4 16 326-341 3-18 (189)
319 1r6b_X CLPA protein; AAA+, N-t 30.3 15 0.0005 44.0 1.2 31 312-342 195-225 (758)
320 2z83_A Helicase/nucleoside tri 29.9 17 0.00058 40.8 1.6 16 326-341 23-38 (459)
321 1kag_A SKI, shikimate kinase I 29.9 15 0.0005 34.7 0.9 16 326-341 6-21 (173)
322 1knq_A Gluconate kinase; ALFA/ 29.8 14 0.00049 34.9 0.8 17 325-341 9-25 (175)
323 2og2_A Putative signal recogni 29.8 17 0.00057 40.0 1.4 17 325-341 158-174 (359)
324 3pxi_A Negative regulator of g 29.8 18 0.00061 43.4 1.8 16 326-341 523-538 (758)
325 2xzl_A ATP-dependent helicase 29.5 17 0.00058 44.2 1.5 26 315-342 368-393 (802)
326 1z6g_A Guanylate kinase; struc 29.5 13 0.00043 37.4 0.3 15 327-341 26-40 (218)
327 2wjy_A Regulator of nonsense t 29.5 18 0.0006 44.0 1.7 26 315-342 364-389 (800)
328 1gku_B Reverse gyrase, TOP-RG; 29.4 20 0.00069 44.9 2.3 24 314-339 63-86 (1054)
329 3e1s_A Exodeoxyribonuclease V, 29.4 18 0.0006 42.3 1.6 27 314-342 196-222 (574)
330 3kta_A Chromosome segregation 29.4 13 0.00045 35.5 0.5 16 326-341 28-43 (182)
331 1yks_A Genome polyprotein [con 29.3 18 0.0006 40.5 1.5 21 319-341 5-25 (440)
332 3trt_A Vimentin; cytoskeleton, 29.1 2E+02 0.0067 23.9 7.8 57 133-189 16-75 (77)
333 1gk4_A Vimentin; intermediate 29.0 1.9E+02 0.0066 24.7 7.8 19 694-712 31-49 (84)
334 1f2t_A RAD50 ABC-ATPase; DNA d 28.9 17 0.00057 34.4 1.1 16 326-341 25-40 (149)
335 2dhr_A FTSH; AAA+ protein, hex 28.8 14 0.00047 42.5 0.5 16 326-341 66-81 (499)
336 1r6b_X CLPA protein; AAA+, N-t 28.7 22 0.00074 42.5 2.3 17 325-341 489-505 (758)
337 2rhm_A Putative kinase; P-loop 28.5 16 0.00055 35.0 0.9 17 325-341 6-22 (193)
338 1tev_A UMP-CMP kinase; ploop, 28.5 17 0.00057 34.7 1.0 17 325-341 4-20 (196)
339 3cm0_A Adenylate kinase; ATP-b 28.4 17 0.00058 34.7 1.1 16 326-341 6-21 (186)
340 3pxi_A Negative regulator of g 28.3 19 0.00064 43.2 1.6 30 312-341 189-218 (758)
341 1jcd_A Major outer membrane li 28.2 1.7E+02 0.0058 23.2 6.5 45 144-188 6-50 (52)
342 2zj8_A DNA helicase, putative 28.0 12 0.00042 44.4 -0.0 21 319-341 36-56 (720)
343 3rc3_A ATP-dependent RNA helic 27.9 16 0.00053 43.7 0.8 46 318-365 151-202 (677)
344 1vma_A Cell division protein F 27.9 19 0.00063 38.6 1.3 17 325-341 105-121 (306)
345 3nbx_X ATPase RAVA; AAA+ ATPas 27.7 15 0.0005 42.2 0.5 26 315-342 34-59 (500)
346 2qor_A Guanylate kinase; phosp 27.6 17 0.00057 35.7 0.9 16 326-341 14-29 (204)
347 1l8d_A DNA double-strand break 27.5 3.2E+02 0.011 24.1 12.1 10 699-708 88-97 (112)
348 1t2k_D Cyclic-AMP-dependent tr 27.3 2.3E+02 0.0077 22.7 7.5 31 150-180 23-53 (61)
349 2fna_A Conserved hypothetical 27.1 19 0.00063 37.8 1.2 20 320-341 28-47 (357)
350 2p6r_A Afuhel308 helicase; pro 27.1 12 0.00042 44.3 -0.3 26 314-341 32-57 (702)
351 1uaa_A REP helicase, protein ( 27.0 17 0.00059 42.8 1.0 23 320-342 11-33 (673)
352 2bbw_A Adenylate kinase 4, AK4 26.9 17 0.00058 36.8 0.8 17 325-341 28-44 (246)
353 2r2a_A Uncharacterized protein 26.8 16 0.00054 36.6 0.5 16 326-341 7-22 (199)
354 3mov_A Lamin-B1; LMNB1, B-type 26.7 1.6E+02 0.0054 26.1 7.0 44 206-249 27-70 (95)
355 1qvr_A CLPB protein; coiled co 26.7 14 0.00048 45.0 0.2 32 312-343 179-210 (854)
356 2vzs_A CSXA, EXO-beta-D-glucos 26.7 14 0.00046 46.3 0.0 86 13-104 946-1032(1032)
357 2ce7_A Cell division protein F 26.5 16 0.00054 41.7 0.5 17 325-341 50-66 (476)
358 1y63_A LMAJ004144AAA protein; 26.4 19 0.00066 34.7 1.0 16 326-341 12-27 (184)
359 1nks_A Adenylate kinase; therm 26.4 19 0.00064 34.3 1.0 16 326-341 3-18 (194)
360 1gd2_E Transcription factor PA 26.3 1.6E+02 0.0056 24.6 6.6 31 135-165 15-45 (70)
361 4gkw_A Spindle assembly abnorm 26.3 4.1E+02 0.014 24.9 18.8 18 696-713 98-115 (167)
362 2vli_A Antibiotic resistance p 26.2 21 0.00073 33.8 1.3 17 325-341 6-22 (183)
363 1v5w_A DMC1, meiotic recombina 26.0 27 0.00094 37.6 2.3 31 311-341 106-139 (343)
364 1e6c_A Shikimate kinase; phosp 25.8 19 0.00064 33.9 0.8 16 326-341 4-19 (173)
365 1w4r_A Thymidine kinase; type 25.8 20 0.0007 36.0 1.1 16 324-339 20-35 (195)
366 2xgj_A ATP-dependent RNA helic 25.6 21 0.00073 44.5 1.4 26 314-341 93-118 (1010)
367 4eun_A Thermoresistant glucoki 25.5 19 0.00065 35.2 0.8 17 325-341 30-46 (200)
368 3asz_A Uridine kinase; cytidin 25.3 18 0.00062 35.4 0.6 16 326-341 8-23 (211)
369 3crm_A TRNA delta(2)-isopenten 25.3 21 0.0007 38.7 1.1 16 325-340 6-21 (323)
370 2bwj_A Adenylate kinase 5; pho 25.3 20 0.00068 34.5 0.9 16 326-341 14-29 (199)
371 3l9o_A ATP-dependent RNA helic 25.1 21 0.00071 45.1 1.2 26 314-341 191-216 (1108)
372 3abh_A Pacsin2, protein kinase 25.1 5.9E+02 0.02 26.3 12.7 33 197-229 212-244 (312)
373 3he5_B Synzip2; heterodimeric 25.0 1.6E+02 0.0054 22.3 5.4 20 664-683 29-48 (52)
374 4h22_A Leucine-rich repeat fli 25.0 2.9E+02 0.0099 24.9 8.2 11 721-731 72-82 (103)
375 1s96_A Guanylate kinase, GMP k 24.8 20 0.00068 36.3 0.8 16 326-341 18-33 (219)
376 3m6a_A ATP-dependent protease 24.7 19 0.00065 41.6 0.8 18 324-341 108-125 (543)
377 1htw_A HI0065; nucleotide-bind 24.6 20 0.00069 34.4 0.8 17 325-341 34-50 (158)
378 1fxk_A Prefoldin; archaeal pro 24.5 3.5E+02 0.012 23.5 12.0 19 665-683 64-82 (107)
379 1go4_E MAD1 (mitotic arrest de 24.4 2.2E+02 0.0074 25.6 7.4 17 583-599 13-29 (100)
380 3kl4_A SRP54, signal recogniti 24.3 23 0.00077 40.0 1.2 17 325-341 98-114 (433)
381 2zqm_A Prefoldin beta subunit 24.3 3.7E+02 0.013 23.7 12.4 20 664-683 68-87 (117)
382 1via_A Shikimate kinase; struc 24.2 21 0.00072 33.9 0.9 15 326-340 6-20 (175)
383 2iyv_A Shikimate kinase, SK; t 24.1 21 0.00072 34.1 0.8 15 326-340 4-18 (184)
384 2qmh_A HPR kinase/phosphorylas 23.9 22 0.00075 36.1 0.9 22 320-341 30-51 (205)
385 2pt5_A Shikimate kinase, SK; a 23.9 23 0.0008 33.1 1.1 16 326-341 2-17 (168)
386 1lkx_A Myosin IE heavy chain; 23.9 22 0.00076 42.5 1.1 34 308-341 77-111 (697)
387 2yhs_A FTSY, cell division pro 23.9 24 0.0008 40.6 1.3 17 325-341 294-310 (503)
388 3tif_A Uncharacterized ABC tra 23.8 21 0.00072 36.4 0.8 16 326-341 33-48 (235)
389 4fi5_A Nucleoprotein; structur 23.8 3.4E+02 0.012 24.8 8.5 15 224-238 70-84 (113)
390 3lay_A Zinc resistance-associa 23.7 1E+02 0.0035 30.4 5.7 29 135-165 73-101 (175)
391 3gp4_A Transcriptional regulat 23.6 4.5E+02 0.015 24.4 14.2 16 555-570 13-28 (142)
392 2c95_A Adenylate kinase 1; tra 23.6 22 0.00076 34.0 0.9 17 325-341 10-26 (196)
393 2avr_X Adhesion A; antiparalle 23.6 4.4E+02 0.015 24.3 11.6 93 641-738 5-99 (119)
394 3t61_A Gluconokinase; PSI-biol 23.6 22 0.00075 34.6 0.9 17 325-341 19-35 (202)
395 3a4m_A L-seryl-tRNA(SEC) kinas 23.5 23 0.00079 36.4 1.0 17 325-341 5-21 (260)
396 1ukz_A Uridylate kinase; trans 23.5 23 0.0008 34.3 1.0 17 325-341 16-32 (203)
397 3t5d_A Septin-7; GTP-binding p 23.5 22 0.00075 36.8 0.9 21 321-341 5-25 (274)
398 4ddu_A Reverse gyrase; topoiso 23.4 29 0.001 43.7 2.1 24 315-340 86-109 (1104)
399 1odf_A YGR205W, hypothetical 3 23.4 28 0.00096 36.8 1.7 20 322-341 29-48 (290)
400 1qf9_A UMP/CMP kinase, protein 23.3 23 0.00078 33.6 0.9 16 326-341 8-23 (194)
401 3foz_A TRNA delta(2)-isopenten 23.3 24 0.00081 38.2 1.1 16 325-340 11-26 (316)
402 2i1q_A DNA repair and recombin 23.2 34 0.0012 36.2 2.3 30 312-341 83-115 (322)
403 3i00_A HIP-I, huntingtin-inter 23.1 4.4E+02 0.015 24.2 10.8 14 584-597 17-30 (120)
404 2p5t_B PEZT; postsegregational 23.1 25 0.00085 36.0 1.2 17 325-341 33-49 (253)
405 2yvu_A Probable adenylyl-sulfa 23.1 27 0.00091 33.5 1.3 18 324-341 13-30 (186)
406 2qen_A Walker-type ATPase; unk 23.0 23 0.0008 37.0 1.0 17 325-341 32-48 (350)
407 3a8t_A Adenylate isopentenyltr 22.9 24 0.00083 38.4 1.1 16 325-340 41-56 (339)
408 1pzn_A RAD51, DNA repair and r 22.9 33 0.0011 37.2 2.2 29 313-341 117-148 (349)
409 1zd8_A GTP:AMP phosphotransfer 22.8 22 0.00075 35.4 0.7 17 325-341 8-24 (227)
410 4anj_A Unconventional myosin-V 22.7 22 0.00074 44.6 0.7 35 307-341 126-161 (1052)
411 3ghg_B Fibrinogen beta chain; 22.4 7.6E+02 0.026 27.8 13.0 16 789-804 291-306 (461)
412 3o8b_A HCV NS3 protease/helica 22.4 31 0.0011 41.1 1.9 17 326-342 234-250 (666)
413 2qag_A Septin-2, protein NEDD5 22.4 24 0.00081 38.5 0.9 24 318-341 31-54 (361)
414 4fi5_A Nucleoprotein; structur 22.3 4.5E+02 0.015 24.0 9.5 21 665-685 68-88 (113)
415 1w9i_A Myosin II heavy chain; 22.2 25 0.00085 42.5 1.1 34 308-341 155-189 (770)
416 2v26_A Myosin VI; calmodulin-b 22.2 25 0.00085 42.6 1.1 34 308-341 123-157 (784)
417 2cdn_A Adenylate kinase; phosp 22.2 28 0.00097 33.8 1.3 20 322-341 18-37 (201)
418 1aky_A Adenylate kinase; ATP:A 22.2 24 0.00082 34.9 0.8 17 325-341 5-21 (220)
419 3ghg_B Fibrinogen beta chain; 22.2 8.8E+02 0.03 27.3 13.4 24 718-741 174-197 (461)
420 1go4_E MAD1 (mitotic arrest de 22.1 4.1E+02 0.014 23.8 8.7 24 631-654 19-42 (100)
421 1xjc_A MOBB protein homolog; s 22.1 24 0.00082 34.5 0.8 16 326-341 6-21 (169)
422 1f6b_A SAR1; gtpases, N-termin 22.1 31 0.0011 33.4 1.6 30 312-341 12-42 (198)
423 3dm5_A SRP54, signal recogniti 22.0 27 0.00092 39.5 1.3 19 324-342 100-118 (443)
424 2z43_A DNA repair and recombin 22.0 29 0.001 36.9 1.5 31 311-341 91-124 (324)
425 1gm5_A RECG; helicase, replica 21.8 25 0.00084 42.6 1.0 26 316-341 381-406 (780)
426 2iut_A DNA translocase FTSK; n 21.8 22 0.00076 41.5 0.5 17 325-341 215-231 (574)
427 3fb4_A Adenylate kinase; psych 21.8 25 0.00084 34.5 0.8 15 327-341 3-17 (216)
428 1jjv_A Dephospho-COA kinase; P 21.8 25 0.00085 34.3 0.8 16 326-341 4-19 (206)
429 3umf_A Adenylate kinase; rossm 21.8 27 0.00093 35.4 1.1 14 326-339 31-44 (217)
430 3exa_A TRNA delta(2)-isopenten 21.7 27 0.00091 37.9 1.1 15 326-340 5-19 (322)
431 1zu4_A FTSY; GTPase, signal re 21.7 24 0.00083 37.9 0.8 16 326-341 107-122 (320)
432 1moz_A ARL1, ADP-ribosylation 21.6 26 0.00088 32.8 0.9 25 317-341 10-35 (183)
433 3sr0_A Adenylate kinase; phosp 21.5 25 0.00086 35.2 0.8 34 327-360 3-36 (206)
434 3ghg_C Fibrinogen gamma chain; 21.5 3.1E+02 0.011 30.5 9.6 17 788-804 224-240 (411)
435 3qks_A DNA double-strand break 21.5 28 0.00094 34.6 1.1 16 326-341 25-40 (203)
436 3ney_A 55 kDa erythrocyte memb 21.3 25 0.00087 35.2 0.8 16 326-341 21-36 (197)
437 3lay_A Zinc resistance-associa 21.1 3.8E+02 0.013 26.2 9.2 19 580-598 69-87 (175)
438 1kk8_A Myosin heavy chain, str 21.0 26 0.00089 42.8 0.9 34 308-341 152-186 (837)
439 1cr0_A DNA primase/helicase; R 21.0 32 0.0011 35.8 1.5 28 314-341 23-52 (296)
440 3aez_A Pantothenate kinase; tr 21.0 26 0.00089 37.5 0.8 17 325-341 91-107 (312)
441 2va8_A SSO2462, SKI2-type heli 20.9 28 0.00097 41.1 1.2 25 315-341 38-63 (715)
442 1g8x_A Myosin II heavy chain f 20.9 26 0.0009 43.7 1.0 20 321-340 169-188 (1010)
443 2zr9_A Protein RECA, recombina 20.8 37 0.0013 36.9 2.0 31 311-341 44-78 (349)
444 1w7j_A Myosin VA; motor protei 20.8 28 0.00095 42.3 1.1 34 308-341 139-173 (795)
445 2whx_A Serine protease/ntpase/ 20.8 31 0.0011 40.5 1.5 24 316-341 180-203 (618)
446 2zvf_A Alanyl-tRNA synthetase; 20.7 1.4E+02 0.0047 28.5 5.9 45 312-363 123-167 (171)
447 2xau_A PRE-mRNA-splicing facto 20.7 24 0.00084 42.6 0.6 25 315-340 101-125 (773)
448 3l4q_C Phosphatidylinositol 3- 20.6 6E+02 0.021 24.8 15.2 110 136-245 4-146 (170)
449 1fxk_C Protein (prefoldin); ar 20.6 4.8E+02 0.016 23.7 10.3 10 671-680 93-102 (133)
450 2ycu_A Non muscle myosin 2C, a 20.6 28 0.00096 43.4 1.1 34 308-341 129-163 (995)
451 1ak2_A Adenylate kinase isoenz 20.5 27 0.00092 35.0 0.8 18 324-341 16-33 (233)
452 1j8m_F SRP54, signal recogniti 20.5 39 0.0013 35.8 2.0 16 326-341 100-115 (297)
453 3dl0_A Adenylate kinase; phosp 20.5 27 0.00093 34.3 0.8 15 327-341 3-17 (216)
454 1g41_A Heat shock protein HSLU 20.3 27 0.00092 39.5 0.8 16 326-341 52-67 (444)
455 2jaq_A Deoxyguanosine kinase; 20.3 28 0.00096 33.4 0.9 16 326-341 2-17 (205)
456 2v3c_C SRP54, signal recogniti 20.3 32 0.0011 38.7 1.4 16 326-341 101-116 (432)
457 1gmj_A ATPase inhibitor; coile 20.1 3.6E+02 0.012 23.4 7.5 18 223-240 58-75 (84)
458 2ius_A DNA translocase FTSK; n 20.0 26 0.00087 40.4 0.5 17 325-341 168-184 (512)
No 1
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=100.00 E-value=3.4e-86 Score=736.12 Aligned_cols=331 Identities=42% Similarity=0.666 Sum_probs=297.7
Q ss_pred CCCeEEEEEeCCCCchhhhCCCceEEE------------------ecCCCCCccceeEEEEeccchhhHHHhhCCccEEE
Q 037169 266 LGNIRVFCRCRPLSKEEASAGHAMVVD------------------FSAAKDGELGILTVDVFADASPLVTSVLDGYNVCI 327 (860)
Q Consensus 266 ~gnIrV~~RvRP~~~~E~~~~~~~~v~------------------~~~~~~~~~~~~~~dVf~~v~plV~~~l~G~N~~I 327 (860)
.|||||||||||+++.|...+...++. |.++..+.....+.+||.++.|+|+++++|||+||
T Consensus 4 ~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~lv~~~l~G~n~ti 83 (369)
T 3cob_A 4 KGKIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDDKAKQHMYDRVFDGNATQDDVFEDTKYLVQSAVDGYNVCI 83 (369)
T ss_dssp CCBCEEEEEECCCCHHHHHTTCCBCEEECSSSEEEEECTTSCEEEEECSEEECTTCCHHHHHHTTTHHHHHHHTTCEEEE
T ss_pred CCCeEEEEECCCCChhhccCCCcEEEEcCCcEEEEecCCCCCceEEecCEEECCCCCcceehhhhhhhhHhhhcCCceEE
Confidence 499999999999999987655432221 22222223333446788889999999999999999
Q ss_pred EeeccCCCCccccccCCCCCCCchhhHHHHHHHHHHHhcCCceEEEEEEEEEEeccccccccCCCCC-CCceEEEecCCC
Q 037169 328 FAYGQTGTGKTFTMEGTQQNRGVNYRTLELLFKIAEERKETFTYSISVSALEVYNEQIRDLLDTSPT-SKKLEIRQASEG 406 (860)
Q Consensus 328 faYGqTGSGKTyTM~G~~~~~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~-~~~l~i~~~~~g 406 (860)
||||||||||||||+|++.++|||||++++||+.+......+.|.|++||+|||||.|+|||++.+. ...+.|++++.+
T Consensus 84 fAYGqTGSGKTyTM~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l~i~e~~~~ 163 (369)
T 3cob_A 84 FAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKDSKG 163 (369)
T ss_dssp EEEECTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSSCCCCCEEEECTTS
T ss_pred EEECCCCCCCeEeecCCCCCCchhHHHHHHHHHHHHhhccCceeEEEEEEEEEeCceeeecCCCcccCCcceEEEECCCC
Confidence 9999999999999999999999999999999999998877799999999999999999999987543 468999999999
Q ss_pred ceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccCCceeEeeEEEeecCCccccccc
Q 037169 407 FHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLINGECTKSKLWLVDLAGSERLAKT 486 (860)
Q Consensus 407 ~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t 486 (860)
+++|+|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|...+...+....|+|+|||||||||..++
T Consensus 164 ~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t 243 (369)
T 3cob_A 164 MVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAIARGKLSFVDLAGSERVKKS 243 (369)
T ss_dssp CEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECCCSSCCCCC
T ss_pred CEEccCCEEEEeCCHHHHHHHHHHHhhcceeecccCCCCCCcceEEEEEEEEEecCCCCcEEEEEEEEEeCCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999988888888999999999999999999
Q ss_pred ccchhchHHHhHhhhhHHHHHHHHHHhccCCCcccCCCCcchhhcccccCCCcceeEEEecCCCCCCHHhHHHHHHHHHH
Q 037169 487 EVQGERLKEAQNINRSLSALGDVISSLATKSGHIPYRNSKLTHLLQDSLGGDSKTLMFLQISPSEQDLGETLSSLNFASR 566 (860)
Q Consensus 487 ~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP~~~~~~ETl~TL~fA~r 566 (860)
++.|.|++|+.+||+||++||+||.||+.+..||||||||||+||||+|||||+|+||+||||+..+++||++||+||+|
T Consensus 244 ~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl~TLrfA~r 323 (369)
T 3cob_A 244 GSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASR 323 (369)
T ss_dssp SSCSHHHHHHHHHTHHHHHHHHHHHHHHTTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHH
T ss_pred CccchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcCCHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccccccChHHHHHHHHHHHHHHHH
Q 037169 567 VRGVELSPARKQIDISKLQKVKMMLEKTKQE 597 (860)
Q Consensus 567 ~r~I~~~p~~~~~~~~~~~~lk~~l~~~k~e 597 (860)
++.|++.|..+... .++.+|+.++..++.+
T Consensus 324 ak~i~~~~~~n~~~-~ei~~L~~~l~~~~~~ 353 (369)
T 3cob_A 324 VRSIVNDPSKNVSS-KEVARLKKLVSYWKEQ 353 (369)
T ss_dssp HHTCBCCCCCCEEC-HHHHHHHHHTTCC---
T ss_pred HhhcccCCcccCCH-HHHHHHHHHHHHHHHh
Confidence 99999999987765 6677776666554443
No 2
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-85 Score=734.44 Aligned_cols=319 Identities=45% Similarity=0.627 Sum_probs=269.4
Q ss_pred hhHHhhhhhccC-CCeEEEEEeCCCCch-hhhCCCceEEE------------------------ecCCCCCccceeEEEE
Q 037169 255 QLNKMVSTIQVL-GNIRVFCRCRPLSKE-EASAGHAMVVD------------------------FSAAKDGELGILTVDV 308 (860)
Q Consensus 255 ~~~~~~~~~~~~-gnIrV~~RvRP~~~~-E~~~~~~~~v~------------------------~~~~~~~~~~~~~~dV 308 (860)
..++|||+++++ |||||||||||+.+. |...+....+. |.++..+.....+.+|
T Consensus 46 ~rr~l~n~~~elkgnIrV~vRvRP~~~~~e~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~F~FD~VF~~~~~Q~~V 125 (403)
T 4etp_A 46 VRRTLHNELQELRGNIRVYLRIRPALKNLENSDTSLINVNEFDDNSGVQSMEVTKIQNTAQVHEFKFDKIFDQQDTNVDV 125 (403)
T ss_dssp HHHHHHHHHHHHHCSEEEEEEECCCCTTTSCSCCTTEEECCCBTTTTBEEEEEEECSSSCEEEEEEESEEECTTCCHHHH
T ss_pred HHHHHHHHHHHcCCCeEEEEEeCCCCCcccccCCCeeEEeeccCCCCceEEEEecCCCCcCceEEEcCEEECCCCchHHH
Confidence 357789999887 999999999999876 33222222221 2222222233334567
Q ss_pred eccchhhHHHhhCCccEEEEeeccCCCCccccccCCCCCCCchhhHHHHHHHHHHHh-cCCceEEEEEEEEEEecccccc
Q 037169 309 FADASPLVTSVLDGYNVCIFAYGQTGTGKTFTMEGTQQNRGVNYRTLELLFKIAEER-KETFTYSISVSALEVYNEQIRD 387 (860)
Q Consensus 309 f~~v~plV~~~l~G~N~~IfaYGqTGSGKTyTM~G~~~~~GIipRal~~LF~~~~~~-~~~~~~~V~vS~lEIYnE~i~D 387 (860)
|.++.|+|+++++|||+||||||||||||||||+|+ ++|||||++++||..+... ...|.|.|+|||+|||||.|+|
T Consensus 126 f~~v~~lv~~~l~G~N~tifAYGqTGSGKTyTM~g~--~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~D 203 (403)
T 4etp_A 126 FKEVGQLVQSSLDGYNVAIFAYGQTGSGKTFTMLNP--GDGIIPSTISHIFNWINKLKTKGWDYKVNAEFIEIYNENIVD 203 (403)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESCTTSSHHHHHHCT--TTSHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHhCCcceEEEEECCCCCCCceEeCCC--CCccchhHHHHHHHHHHhhhccCceEEEEEEEEEEecceeeE
Confidence 878899999999999999999999999999999997 4699999999999999874 4568999999999999999999
Q ss_pred ccCCCC-------CCCceEEEecC-CCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEE
Q 037169 388 LLDTSP-------TSKKLEIRQAS-EGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKA 459 (860)
Q Consensus 388 LL~~~~-------~~~~l~i~~~~-~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~ 459 (860)
||++.+ ....+.+++++ .++++|+|++++.|.|+++++.+|..|.++|++++|.||.+|||||+||+|+|.+
T Consensus 204 LL~~~~~~~~~~~~~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~ 283 (403)
T 4etp_A 204 LLRSDNNNKEDTSIGLKHEIRHDQETKTTTITNVTSVKLESEEMVEIILKKANKLRSTASTASNEHSSRSHSIFIIHLSG 283 (403)
T ss_dssp TTCC--------CCSCCCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHHC--C----CHHHHHHHTSEEEEEEEEEE
T ss_pred ccCCccccccccccCcceeeEEeCCCCCEEecCcEEEEeCCHHHHHHHHHHHHHhcccccccCCcccCCcccEEEEEEEE
Confidence 998653 23457777766 4679999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCceeEeeEEEeecCCcccccccccchhchHHHhHhhhhHHHHHHHHHHhccCCC---cccCCCCcchhhcccccC
Q 037169 460 KNLINGECTKSKLWLVDLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISSLATKSG---HIPYRNSKLTHLLQDSLG 536 (860)
Q Consensus 460 ~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~---hVPYRdSKLT~LLqdsLg 536 (860)
.+...+....|+|+|||||||||..++++.|.|++|+.+||+||++||+||.||+.+.. ||||||||||+||||+||
T Consensus 284 ~~~~~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~LLqdsLg 363 (403)
T 4etp_A 284 SNAKTGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSALGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLT 363 (403)
T ss_dssp EETTTCCEEEEEEEEEECCCCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHTSSCTTTSCCCGGGSHHHHHTGGGTS
T ss_pred eecCCCCeeEEEEEEEECCCCccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcCCcccchHHHHHHHhcC
Confidence 98888888899999999999999999999999999999999999999999999987654 999999999999999999
Q ss_pred CCcceeEEEecCCCCCCHHhHHHHHHHHHHhhccccccc
Q 037169 537 GDSKTLMFLQISPSEQDLGETLSSLNFASRVRGVELSPA 575 (860)
Q Consensus 537 GnskT~mI~~VSP~~~~~~ETl~TL~fA~r~r~I~~~p~ 575 (860)
|||+|+||+||||+..+++||++||+||+|+++|+++|.
T Consensus 364 Gnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~~~~~~r 402 (403)
T 4etp_A 364 GDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRLVSR 402 (403)
T ss_dssp TTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCC-----
T ss_pred CCceEEEEEEeCCchhhHHHHHHHHHHHHHHhhcccCCC
Confidence 999999999999999999999999999999999998874
No 3
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=100.00 E-value=7.1e-85 Score=734.94 Aligned_cols=321 Identities=39% Similarity=0.583 Sum_probs=267.2
Q ss_pred hhHHhhhhhccC-CCeEEEEEeCCCCchhhhCCCceEE-----------------------EecCCCCCccceeEEEEec
Q 037169 255 QLNKMVSTIQVL-GNIRVFCRCRPLSKEEASAGHAMVV-----------------------DFSAAKDGELGILTVDVFA 310 (860)
Q Consensus 255 ~~~~~~~~~~~~-gnIrV~~RvRP~~~~E~~~~~~~~v-----------------------~~~~~~~~~~~~~~~dVf~ 310 (860)
..++|+|+++++ |||||||||||+.+.|...+...+. .|.++..+.....+.+||.
T Consensus 46 ~rr~l~n~~~~l~gnIrV~vRvRP~~~~E~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~~Q~~Vf~ 125 (412)
T 3u06_A 46 ERKELHNTVMDLRDNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIFE 125 (412)
T ss_dssp HHHHHHHHHHHHTCSEEEEEEECCCCGGGTTSCBCEEEEEETTEEEEECCC-------CCCEEECSEEECTTCCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEEEEcCCCCchhccCcceEEEecCCCEEEEecCCcccccccCceEEeeCeEcCCCCCHHHHHH
Confidence 457888988877 9999999999999888654322111 1222222333334467888
Q ss_pred cchhhHHHhhCCccEEEEeeccCCCCccccccCCCCCCCchhhHHHHHHHHHHHh-cCCceEEEEEEEEEEecccccccc
Q 037169 311 DASPLVTSVLDGYNVCIFAYGQTGTGKTFTMEGTQQNRGVNYRTLELLFKIAEER-KETFTYSISVSALEVYNEQIRDLL 389 (860)
Q Consensus 311 ~v~plV~~~l~G~N~~IfaYGqTGSGKTyTM~G~~~~~GIipRal~~LF~~~~~~-~~~~~~~V~vS~lEIYnE~i~DLL 389 (860)
.+.|+|+++++|||+||||||||||||||||+|+++++|||||++++||+.+... ...+.|.|+|||+|||||.|+|||
T Consensus 126 ~v~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL 205 (412)
T 3u06_A 126 MVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLL 205 (412)
T ss_dssp TTHHHHHHHHTTCCEEEEEESSTTSSHHHHHTEETTEECHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETT
T ss_pred HHHHHHHHHHCCCceEEEEecCCCCCCeeEecCCCCCCccHHHHHHHHHHhhhhhcccCceEEEEEEEEEEeCCeeEEcC
Confidence 8999999999999999999999999999999999999999999999999999864 457899999999999999999999
Q ss_pred CCCCCCCceEEEecCCCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccCCceeE
Q 037169 390 DTSPTSKKLEIRQASEGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLINGECTK 469 (860)
Q Consensus 390 ~~~~~~~~l~i~~~~~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~~~~~~ 469 (860)
++.+....+.+.+++.++++|+|++++.|.+++|++.+|..|.++|++++|.||..|||||+||+|+|.+.+...+....
T Consensus 206 ~~~~~~~~i~~~~~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~ 285 (412)
T 3u06_A 206 SNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISV 285 (412)
T ss_dssp CCSCCCCCEEECSSCTTSEEETTCCCEECCSHHHHHHHHHHHHHHCC-----CHHHHTTCEEEEEEEEEEEETTTTEEEE
T ss_pred CCCCCCceeeeeecCCCCEEEcceEEEEeCCHHHHHHHHHHHHhcccccccCCCCCCcCceEEEEEEEEEEeCCCCCEEE
Confidence 86554445566677889999999999999999999999999999999999999999999999999999998888888889
Q ss_pred eeEEEeecCCcccccccccchhchHHHhHhhhhHHHHHHHHHHhccCCCcccCCCCcchhhcccccCCCcceeEEEecCC
Q 037169 470 SKLWLVDLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISSLATKSGHIPYRNSKLTHLLQDSLGGDSKTLMFLQISP 549 (860)
Q Consensus 470 skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP 549 (860)
|+|+|||||||||.. .|.|++|+.+||+||++||+||.||+.++.||||||||||+||||||||||+|+||+||||
T Consensus 286 ~kL~lVDLAGSEr~~----~~~rl~E~~~INkSL~aLg~vI~aL~~~~~hiPyRdSkLT~LLqdsLgGnskt~mI~~vsP 361 (412)
T 3u06_A 286 GSINLVDLAGSESPK----TSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSP 361 (412)
T ss_dssp EEEEEEECCCCCC--------------CTTTHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHHGGGTSTTCEEEEEEEECC
T ss_pred EEEEEEECCCCCcCC----ccchhHhHHHHhHHHHHHHHHHHHHhccCCCCCccccHHHHHHHHhcCCCceEEEEEEeCC
Confidence 999999999999974 4689999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHhHHHHHHHHHHhhccccccccccc
Q 037169 550 SEQDLGETLSSLNFASRVRGVELSPARKQI 579 (860)
Q Consensus 550 ~~~~~~ETl~TL~fA~r~r~I~~~p~~~~~ 579 (860)
+..+++||++||+||+|++.|+.+++++..
T Consensus 362 ~~~~~~ETl~TLrfA~rv~~i~~~~~~~n~ 391 (412)
T 3u06_A 362 FQDCFQESVKSLRFAASVNSCKMTKAKRNR 391 (412)
T ss_dssp BGGGHHHHHHHHHHHHHHHHHCC-------
T ss_pred ChhhHHHHHHHHHHHHHHhhcccccccccc
Confidence 999999999999999999999988876544
No 4
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=100.00 E-value=1.2e-83 Score=711.54 Aligned_cols=311 Identities=39% Similarity=0.597 Sum_probs=255.2
Q ss_pred CCCeEEEEEeCCCCchhhhCCCceEEEecCC----------------------------CCCccceeEEEEecc-chhhH
Q 037169 266 LGNIRVFCRCRPLSKEEASAGHAMVVDFSAA----------------------------KDGELGILTVDVFAD-ASPLV 316 (860)
Q Consensus 266 ~gnIrV~~RvRP~~~~E~~~~~~~~v~~~~~----------------------------~~~~~~~~~~dVf~~-v~plV 316 (860)
.+||||||||||+++.|...+...++.++.. ..+.....+.+||.+ +.|+|
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv 82 (350)
T 2vvg_A 3 SDNIKVIVRCRPLNARETRENALNIIRMDEASAQVIVDPPEQEKSATQAKKVPRTFTFDAVYDQTSCNYGIFQASFKPLI 82 (350)
T ss_dssp -CBCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEECC--------------EEEECSEEECTTCCHHHHHHHTTHHHH
T ss_pred CCCeEEEEEeCCCChhhhccCCceEEEEcCCCCEEEEeeccccccccccCCCceEeeCCEEECCCcchhHHHHHHHHHHH
Confidence 4899999999999999987766555543321 111111222456666 68999
Q ss_pred HHhhCCccEEEEeeccCCCCccccccCCCCCCCchhhHHHHHHHHHHHhcCCceEEEEEEEEEEeccccccccCCCCCCC
Q 037169 317 TSVLDGYNVCIFAYGQTGTGKTFTMEGTQQNRGVNYRTLELLFKIAEERKETFTYSISVSALEVYNEQIRDLLDTSPTSK 396 (860)
Q Consensus 317 ~~~l~G~N~~IfaYGqTGSGKTyTM~G~~~~~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~~ 396 (860)
+++++|||+||||||||||||||||+|+++++|||||++++||+.+......+.|.|++||+|||||.|+|||++ .+
T Consensus 83 ~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~---~~ 159 (350)
T 2vvg_A 83 DAVLEGFNSTIFAYGQTGAGKTWTMGGNKEEPGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKN---NT 159 (350)
T ss_dssp HHHHTTCCEEEEEECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHTCCTTEEEEEEEEEEEEETTEEEETTTT---EE
T ss_pred HHHhCCCceeEEeecCCCCCCCEEeecCCccCchHHHHHHHHHHHHHhhccCCcEEEEEEEEEEeCCEEEEcccC---Cc
Confidence 999999999999999999999999999999999999999999999987777899999999999999999999973 46
Q ss_pred ceEEEecCCCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccCCc--eeEeeEEE
Q 037169 397 KLEIRQASEGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLINGE--CTKSKLWL 474 (860)
Q Consensus 397 ~l~i~~~~~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~~~--~~~skL~l 474 (860)
.+.+++++.++++|+|++++.|.|++|++.+|..|.++|++++|.||.+|||||+||+|+|...+...+. ...|+|+|
T Consensus 160 ~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~skl~l 239 (350)
T 2vvg_A 160 KLPLKEDKTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFMVRIECSEVIENKEVIRVGKLNL 239 (350)
T ss_dssp EECEEEETTTEEEETTCCCEEESSHHHHHHHHHHHHHHC----------CTTCEEEEEEEEEEEEC----CEEEEEEEEE
T ss_pred CceeeEcCCCCEEecCCEEEEcCCHHHHHHHHHHHHhccccccccCCCCCCcceEEEEEEEEEeeccCCCccEEEEEEEE
Confidence 7999999999999999999999999999999999999999999999999999999999999987654433 56799999
Q ss_pred eecCCcccccccccchhchHHHhHhhhhHHHHHHHHHHhccCCCcccCCCCcchhhcccccCCCcceeEEEecCCCCCCH
Q 037169 475 VDLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISSLATKSGHIPYRNSKLTHLLQDSLGGDSKTLMFLQISPSEQDL 554 (860)
Q Consensus 475 VDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP~~~~~ 554 (860)
||||||||..++++.|.|++|+.+||+||++||+||.||+.+..||||||||||+||||+||||++|+||+||||+..++
T Consensus 240 VDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~ 319 (350)
T 2vvg_A 240 VDLAGSERQSKTGATGETLVEGAKINLSLSALGLVISKLVEGATHIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTNY 319 (350)
T ss_dssp EECCCCCC---------------CTTHHHHHHHHHHHHHHHTCSSCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGH
T ss_pred EeCCCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHcCCCCCCccccHHHHHHHHhcCCCccEEEEEEeCCccccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHhhccccccccccc
Q 037169 555 GETLSSLNFASRVRGVELSPARKQI 579 (860)
Q Consensus 555 ~ETl~TL~fA~r~r~I~~~p~~~~~ 579 (860)
+||++||+||+|++.|++.|..+..
T Consensus 320 ~ETl~TL~fA~rak~i~n~~~~n~~ 344 (350)
T 2vvg_A 320 DETMSTLRYADRAKQIKNKPRINED 344 (350)
T ss_dssp HHHHHHHHHHHHHTTCBCCCCCCBS
T ss_pred HHHHHHHHHHHHHhhccccceecCC
Confidence 9999999999999999999987754
No 5
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=100.00 E-value=9.1e-84 Score=716.22 Aligned_cols=314 Identities=42% Similarity=0.616 Sum_probs=270.1
Q ss_pred cCCCeEEEEEeCCCCchhhhCCCceEEEecCC----------------CCCccceeEEEEecc-chhhHHHhhCCccEEE
Q 037169 265 VLGNIRVFCRCRPLSKEEASAGHAMVVDFSAA----------------KDGELGILTVDVFAD-ASPLVTSVLDGYNVCI 327 (860)
Q Consensus 265 ~~gnIrV~~RvRP~~~~E~~~~~~~~v~~~~~----------------~~~~~~~~~~dVf~~-v~plV~~~l~G~N~~I 327 (860)
..|||||||||||+++.|...+...++.++.. ..+.....+.+||.+ +.|+|+++++|||+||
T Consensus 9 ~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~i~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~ti 88 (365)
T 2y65_A 9 AEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVLAGYNGTI 88 (365)
T ss_dssp CEEECEEEEEECCCCHHHHHTTCCBCEECCSSSTTCEEEETTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEEE
T ss_pred CCCCeEEEEEcCcCChhHhccCCceEEEeCCCCCCcEEEECCEEEeCceEecCCCCHHHHHHHhhhhHHHHHhCCCceEE
Confidence 34899999999999999987777666655442 112222233457766 6899999999999999
Q ss_pred EeeccCCCCccccccCCC---CCCCchhhHHHHHHHHHHHhcCCceEEEEEEEEEEeccccccccCCCCCCCceEEEecC
Q 037169 328 FAYGQTGTGKTFTMEGTQ---QNRGVNYRTLELLFKIAEERKETFTYSISVSALEVYNEQIRDLLDTSPTSKKLEIRQAS 404 (860)
Q Consensus 328 faYGqTGSGKTyTM~G~~---~~~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~~~l~i~~~~ 404 (860)
||||||||||||||+|+. .++|||||++++||+.+......+.|.|+|||+|||||.|+|||++. ...+.+++++
T Consensus 89 fAYGqTGSGKTyTm~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~--~~~l~i~e~~ 166 (365)
T 2y65_A 89 FAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVS--KVNLSVHEDK 166 (365)
T ss_dssp EEECSTTSSHHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTT--CCSBCEEECS
T ss_pred EeecCCCCCCceEEecCCCCcccCChHHHHHHHHHHHHHhccCCceEEEEEEEEEEECCeeeecccCC--cCCceEEECC
Confidence 999999999999999975 45699999999999999988888999999999999999999999853 4679999999
Q ss_pred CCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccCCceeEeeEEEeecCCccccc
Q 037169 405 EGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLINGECTKSKLWLVDLAGSERLA 484 (860)
Q Consensus 405 ~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~ 484 (860)
.++++|.|++++.|.|++|++.+|..|.++|++++|.||.+|||||+||+|+|.+.+...+....|+|+|||||||||..
T Consensus 167 ~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~ 246 (365)
T 2y65_A 167 NRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSGKLYLVDLAGSEKVS 246 (365)
T ss_dssp SSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCCC--
T ss_pred CCCEEecCCEEEecCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecCCCCEeEEEEEEEECCCCCcch
Confidence 99999999999999999999999999999999999999999999999999999998887788889999999999999999
Q ss_pred ccccchhchHHHhHhhhhHHHHHHHHHHhccC-CCcccCCCCcchhhcccccCCCcceeEEEecCCCCCCHHhHHHHHHH
Q 037169 485 KTEVQGERLKEAQNINRSLSALGDVISSLATK-SGHIPYRNSKLTHLLQDSLGGDSKTLMFLQISPSEQDLGETLSSLNF 563 (860)
Q Consensus 485 ~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~-~~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP~~~~~~ETl~TL~f 563 (860)
++++.|.|++|+.+||+||++||+||.||+.+ ..||||||||||+||||+||||++|+||+||||+..+++||++||+|
T Consensus 247 ~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~f 326 (365)
T 2y65_A 247 KTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDF 326 (365)
T ss_dssp --------------CCHHHHHHHHHHHHHHHCCCSCCCGGGCHHHHHTGGGTTSSSEEEEEEEECCBGGGHHHHHHHHHH
T ss_pred hcCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccCHHHHHHHhhcCCCccEEEEEEecCccCCHHHHHHHHHH
Confidence 99999999999999999999999999999986 58999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccccccccccC
Q 037169 564 ASRVRGVELSPARKQID 580 (860)
Q Consensus 564 A~r~r~I~~~p~~~~~~ 580 (860)
|+|++.|++.|..+...
T Consensus 327 A~rak~I~n~~~~n~~~ 343 (365)
T 2y65_A 327 GRRAKTVKNVVCVNEEL 343 (365)
T ss_dssp HHHHTTCEEECCCEEEC
T ss_pred HHHHhcccCcceeCCCC
Confidence 99999999999887653
No 6
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}
Probab=100.00 E-value=5.4e-83 Score=702.20 Aligned_cols=307 Identities=51% Similarity=0.785 Sum_probs=266.3
Q ss_pred CCCeEEEEEeCCCCchhhhCC-CceEEEe-------------------cCCCCCccceeEEEEeccchhhHHHhhCCccE
Q 037169 266 LGNIRVFCRCRPLSKEEASAG-HAMVVDF-------------------SAAKDGELGILTVDVFADASPLVTSVLDGYNV 325 (860)
Q Consensus 266 ~gnIrV~~RvRP~~~~E~~~~-~~~~v~~-------------------~~~~~~~~~~~~~dVf~~v~plV~~~l~G~N~ 325 (860)
.|||||||||||+++.|...+ ...++.+ .++..+.....+.+||.++.|+|+++++|||+
T Consensus 3 ~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~v~~lv~~~l~G~n~ 82 (330)
T 2h58_A 3 KGNIRVIARVRPVTKEDGEGPEATNAVTFDADDDSIIHLLHKGKPVSFELDKVFSPQASQQDVFQEVQALVTSCIDGFNV 82 (330)
T ss_dssp --CEEEEEEECCCCGGGCSSGGGSBCEEECSSCTTEEEEEETTEEEEEECSEEECTTCCHHHHHTTTHHHHHHHHTTCCE
T ss_pred CCCEEEEEEcCCCChhhcccCCCccEEEEeCCCCcEEEEcCCCCeeEEecCeEeCCCCCcHhHHHHHHHHHHHHhCCCEE
Confidence 499999999999998885432 1222333 22222333334467888899999999999999
Q ss_pred EEEeeccCCCCccccccCCCCCCCchhhHHHHHHHHHHHhcCCceEEEEEEEEEEeccccccccCCCCC-CCceEEEecC
Q 037169 326 CIFAYGQTGTGKTFTMEGTQQNRGVNYRTLELLFKIAEERKETFTYSISVSALEVYNEQIRDLLDTSPT-SKKLEIRQAS 404 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM~G~~~~~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~-~~~l~i~~~~ 404 (860)
||||||||||||||||+|+++++|||||++++||+.+......+.|.|+|||+|||||.|+|||++.+. ...+.+++++
T Consensus 83 tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~~~~~~ 162 (330)
T 2h58_A 83 CIFAYGQTGAGKTYTMEGTAENPGINQRALQLLFSEVQEKASDWEYTITVSAAEIYNEVLRDLLGKEPQEKLEIRLCPDG 162 (330)
T ss_dssp EEEEESSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSCSSCCCCCCEECTTS
T ss_pred EEEeECCCCCCCcEEEecCCCCCcHHHHHHHHHHHhhhcccCCceEEEEEEEEEEECCChhhcccccccccceEEEeecC
Confidence 999999999999999999999999999999999999998778899999999999999999999986543 2234445678
Q ss_pred CCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccCCceeEeeEEEeecCCccccc
Q 037169 405 EGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLINGECTKSKLWLVDLAGSERLA 484 (860)
Q Consensus 405 ~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~ 484 (860)
.++++|+|++++.|.|++|++.+|..|.++|++++|.||.+|||||+||+|+|.+.+...+....|+|+|||||||||..
T Consensus 163 ~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~ 242 (330)
T 2h58_A 163 SGQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVG 242 (330)
T ss_dssp SCCEECTTCCCEEECSHHHHHHHHHHHHHHTTCTTCCSCSCGGGSEEEEEEEEEEEETTTTEEEEEEEEEEECCCCCCCC
T ss_pred CCCEecCCCEEEEeCCHHHHHHHHHHHHhhCCcccccCCCCcCCccEEEEEEEEEEecCCCcEEEEEEEEEeCCCCCccc
Confidence 89999999999999999999999999999999999999999999999999999998888888889999999999999999
Q ss_pred ccccchhchHHHhHhhhhHHHHHHHHHHhccCCCcccCCCCcchhhcccccCCCcceeEEEecCCCCCCHHhHHHHHHHH
Q 037169 485 KTEVQGERLKEAQNINRSLSALGDVISSLATKSGHIPYRNSKLTHLLQDSLGGDSKTLMFLQISPSEQDLGETLSSLNFA 564 (860)
Q Consensus 485 ~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP~~~~~~ETl~TL~fA 564 (860)
++++.|.|++|+.+||+||++||+||.||+.+..||||||||||+||||+||||++|+||+||||+..+++||++||+||
T Consensus 243 ~t~~~g~r~~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lL~dsLgGns~t~mI~~isP~~~~~~ETl~TL~fA 322 (330)
T 2h58_A 243 KSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFA 322 (330)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTHHHHSTTCEEEEEEEECCBGGGHHHHHHHHHHH
T ss_pred ccCCchhhhHHHHHhhHhHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHhCCCceEEEEEEeCCccccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccc
Q 037169 565 SRVRGVEL 572 (860)
Q Consensus 565 ~r~r~I~~ 572 (860)
+|+++|++
T Consensus 323 ~rak~i~~ 330 (330)
T 2h58_A 323 ERVRSVEL 330 (330)
T ss_dssp HHHC----
T ss_pred HHHhhCcC
Confidence 99999863
No 7
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-83 Score=715.55 Aligned_cols=314 Identities=46% Similarity=0.639 Sum_probs=241.3
Q ss_pred HHhhhhhccC-CCeEEEEEeCCCCchhhhCCCc---------------eEEE----------------------ecCCCC
Q 037169 257 NKMVSTIQVL-GNIRVFCRCRPLSKEEASAGHA---------------MVVD----------------------FSAAKD 298 (860)
Q Consensus 257 ~~~~~~~~~~-gnIrV~~RvRP~~~~E~~~~~~---------------~~v~----------------------~~~~~~ 298 (860)
.++||+++++ |||||||||||+++.|...+.. ..+. |.++..
T Consensus 11 ~~~hn~~~~~~~~irV~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~FD~V 90 (376)
T 2rep_A 11 SSGLVPRGSLKGNIRVFCRVRPVLPGEPTPPPGLLLFPSGPGGPSDPPTRLSLSRSDERRGTLSGAPAPPPRHDFSFDRV 90 (376)
T ss_dssp ------------CEEEEEEECCCCTTSCCCCGGGSBCCC------CCCCEEECCC-----------------CEEECSEE
T ss_pred ccccchhhccCCCeEEEEEcCCCChhhcccCCceEEEccCcccccCCCcEEEEecCCccccccccccCCCCceeeeecEE
Confidence 4688888877 9999999999999888654311 1111 222222
Q ss_pred CccceeEEEEeccchhhHHHhhCCccEEEEeeccCCCCccccccCCCC----CCCchhhHHHHHHHHHHHh-cCCceEEE
Q 037169 299 GELGILTVDVFADASPLVTSVLDGYNVCIFAYGQTGTGKTFTMEGTQQ----NRGVNYRTLELLFKIAEER-KETFTYSI 373 (860)
Q Consensus 299 ~~~~~~~~dVf~~v~plV~~~l~G~N~~IfaYGqTGSGKTyTM~G~~~----~~GIipRal~~LF~~~~~~-~~~~~~~V 373 (860)
+.....+.+||.++.|+|+++++|||+||||||||||||||||+|++. ++|||||++++||+.+... ...+.|.|
T Consensus 91 f~~~~~Q~~Vy~~v~~lv~~~l~G~N~tifAYGqTGSGKTyTM~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v 170 (376)
T 2rep_A 91 FPPGSGQDEVFEEIAMLVQSALDGYPVCIFAYGQTGSGKTFTMEGGPGGDPQLEGLIPRALRHLFSVAQELSGQGWTYSF 170 (376)
T ss_dssp ECTTCCHHHHHHHHHHHHHGGGGTCCEEEEEECSTTSSHHHHHTBCSSCCGGGBCHHHHHHHHHHHHHHHGGGGTEEEEE
T ss_pred cCCcccchhhhhhHHHHHHHhcCCCceEEEEeCCCCCCCceEeecCCCCCcccCCcHHHHHHHHHHHHHHhhcCCeEEEE
Confidence 222333456888889999999999999999999999999999999753 6899999999999999874 35689999
Q ss_pred EEEEEEEeccccccccCCCC---CCCceEEEec--CCCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCC
Q 037169 374 SVSALEVYNEQIRDLLDTSP---TSKKLEIRQA--SEGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSR 448 (860)
Q Consensus 374 ~vS~lEIYnE~i~DLL~~~~---~~~~l~i~~~--~~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSR 448 (860)
+|||+|||||.|+|||++.+ ....+.++++ +.++++|.|++++.|.+++|++.+|..|.++|++++|.||..|||
T Consensus 171 ~vS~~EIYnE~i~DLL~~~~~~~~~~~l~ir~~~~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSR 250 (376)
T 2rep_A 171 VASYVEIYNETVRDLLATGTRKGQGGECEIRRAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRAVARTAQNERSSR 250 (376)
T ss_dssp EEEEEEEETTEEEETTCCC--------CCEEEC---CCCEEETTCCCEEECSHHHHHHHHHHHHHHHHHCC-----CGGG
T ss_pred EEEEEEEECCEeeEccccccccccCCCceEEeccCCCCCEEECCcEEEEeCCHHHHHHHHHHHHhhcccccccCCCCCCC
Confidence 99999999999999998642 2356888888 578899999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEEEeeccCCceeEeeEEEeecCCcccccccccch----hchHHHhHhhhhHHHHHHHHHHhccCCCcccCCC
Q 037169 449 SHCMLCISVKAKNLINGECTKSKLWLVDLAGSERLAKTEVQG----ERLKEAQNINRSLSALGDVISSLATKSGHIPYRN 524 (860)
Q Consensus 449 SH~If~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g----~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRd 524 (860)
||+||+|+|.+.+...+....|+|+|||||||||..++++.| +|++|+.+||+||++||+||.||+.+..||||||
T Consensus 251 SH~Ifti~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~~~~~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRd 330 (376)
T 2rep_A 251 SHSVFQLQISGEHSSRGLQCGAPLSLVDLAGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMALSNKESHVPYRN 330 (376)
T ss_dssp SEEEEEEEEEEEESSSCCEEEEEEEEEECCCCC------------------------CHHHHHHHHHHHHTTCSCCCGGG
T ss_pred ceEEEEEEEEEEecCCCcEEEeEEEEEECCCCcccccccccCccccchhhHHhHhhHHHHHHHHHHHHHhcCCCccCCcC
Confidence 999999999998877777888999999999999999999999 9999999999999999999999999999999999
Q ss_pred CcchhhcccccCCCcceeEEEecCCCCCCHHhHHHHHHHHHHhhcc
Q 037169 525 SKLTHLLQDSLGGDSKTLMFLQISPSEQDLGETLSSLNFASRVRGV 570 (860)
Q Consensus 525 SKLT~LLqdsLgGnskT~mI~~VSP~~~~~~ETl~TL~fA~r~r~I 570 (860)
||||+||||+||||++|+||+||||+..+++||++||+||+|++++
T Consensus 331 SkLT~LLqdsLgGnskT~mIa~isP~~~~~~ETlsTLrfA~Rv~~~ 376 (376)
T 2rep_A 331 SKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQC 376 (376)
T ss_dssp SHHHHHTGGGTSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHC--
T ss_pred CHHHHHHHHhhCCCCeEEEEEEeCCchhhHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999864
No 8
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.6e-83 Score=715.44 Aligned_cols=313 Identities=35% Similarity=0.535 Sum_probs=243.2
Q ss_pred cCCCeEEEEEeCCCCchhhhCCCceEEE--------------------ecCCCCCccceeEEEEecc-chhhHHHhhCCc
Q 037169 265 VLGNIRVFCRCRPLSKEEASAGHAMVVD--------------------FSAAKDGELGILTVDVFAD-ASPLVTSVLDGY 323 (860)
Q Consensus 265 ~~gnIrV~~RvRP~~~~E~~~~~~~~v~--------------------~~~~~~~~~~~~~~dVf~~-v~plV~~~l~G~ 323 (860)
..|||||+|||||+++.|...+...++. |.++..+.....+.+||.. +.|+|+++++||
T Consensus 19 ~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~i~~~~~~~~~~~f~FD~Vf~~~~tQ~~Vy~~~~~plv~~~l~G~ 98 (388)
T 3bfn_A 19 PPARVRVAVRLRPFVDGTAGASDPPCVRGMDSCSLEIANWRNHQETLKYQFDAFYGERSTQQDIYAGSVQPILRHLLEGQ 98 (388)
T ss_dssp CCCCCEEEEEECCCC-----------------------------CEEEEECSEEECTTCCHHHHHHHHTGGGHHHHTTTC
T ss_pred CCCCEEEEEECCCCChhhhccCCCceEEecCCCeEEEecCCCCCCeeEEEcceEecCCCCHhHHHHHHHHHHHHHhhcCc
Confidence 3499999999999999886543332221 2222223333344567775 899999999999
Q ss_pred cEEEEeeccCCCCccccccCCCCCCCchhhHHHHHHHHHHHh---cCCceEEEEEEEEEEeccccccccCCCCCCCceEE
Q 037169 324 NVCIFAYGQTGTGKTFTMEGTQQNRGVNYRTLELLFKIAEER---KETFTYSISVSALEVYNEQIRDLLDTSPTSKKLEI 400 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM~G~~~~~GIipRal~~LF~~~~~~---~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~~~l~i 400 (860)
|+||||||||||||||||+|+++++|||||++.+||+.+... ...+.|.|+|||+|||||.|+|||++. ...+.|
T Consensus 99 N~tifAYGqTGSGKTyTM~G~~~~~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~--~~~l~i 176 (388)
T 3bfn_A 99 NASVLAYGPTGAGKTHTMLGSPEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPA--SGDLVI 176 (388)
T ss_dssp CEEEEEESCTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSCS--SCBCCC
T ss_pred eeeEeeecCCCCCCCeEeecCccccchhHHHHHHHHHHHHHhhccCCCceEEEEEEEEEEECCeeeehhccC--CCCceE
Confidence 999999999999999999999999999999999999999763 346899999999999999999999853 457999
Q ss_pred EecCCCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccC-CceeEeeEEEeecCC
Q 037169 401 RQASEGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLIN-GECTKSKLWLVDLAG 479 (860)
Q Consensus 401 ~~~~~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~-~~~~~skL~lVDLAG 479 (860)
++++.++++|+|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+.+... .....|+|+||||||
T Consensus 177 red~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~skL~lVDLAG 256 (388)
T 3bfn_A 177 REDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLAPFRQREGKLYLIDLAG 256 (388)
T ss_dssp EECTTSCEECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEEEEEEESSTTCCEEEEEEEEEECCC
T ss_pred EEcCCCCEEeccceEEEeCCHHHHHHHHHHHhhccccccccCCCCCCCCeEEEEEEEEEeccCCCCceeEEEEEEEECCC
Confidence 9999999999999999999999999999999999999999999999999999999999876543 345789999999999
Q ss_pred cccccccccchhchHHHhHhhhhHHHHHHHHHHhccCCCcccCCCCcchhhcccccCCCcceeEEEecCCCCCCHHhHHH
Q 037169 480 SERLAKTEVQGERLKEAQNINRSLSALGDVISSLATKSGHIPYRNSKLTHLLQDSLGGDSKTLMFLQISPSEQDLGETLS 559 (860)
Q Consensus 480 SEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP~~~~~~ETl~ 559 (860)
|||..++++.|.|++|+.+||+||++||+||.||+.+..||||||||||+||||+||||++|+||+||||+..+++||++
T Consensus 257 SEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSkLTrlLqdsLgGnskT~mIa~iSP~~~~~~ETls 336 (388)
T 3bfn_A 257 SEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVS 336 (388)
T ss_dssp TTC--------------CCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTTTSSSTTCEEEEEEEECCSGGGHHHHHH
T ss_pred CcccccccCccchhHHHhHhhhhHHHHHHHHHHHhcCCCCCcCcccHHHHHHHHhhCCCccEEEEEEECCccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccccccccc
Q 037169 560 SLNFASRVRGVELSPARKQI 579 (860)
Q Consensus 560 TL~fA~r~r~I~~~p~~~~~ 579 (860)
||+||+|++.|++.|..+..
T Consensus 337 TLrfA~rak~I~n~p~~n~~ 356 (388)
T 3bfn_A 337 ALNFAARSKEVINRPFTNES 356 (388)
T ss_dssp HHHHHCSEEEEC--------
T ss_pred HHHHHHHHhhCcCcCcccCC
Confidence 99999999999999987754
No 9
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=100.00 E-value=5.4e-83 Score=707.46 Aligned_cols=307 Identities=44% Similarity=0.654 Sum_probs=250.8
Q ss_pred CCCeEEEEEeCCCCchhhhCCCceEEE------------------------ecCCCCCccceeEEEEeccchhhHHHhhC
Q 037169 266 LGNIRVFCRCRPLSKEEASAGHAMVVD------------------------FSAAKDGELGILTVDVFADASPLVTSVLD 321 (860)
Q Consensus 266 ~gnIrV~~RvRP~~~~E~~~~~~~~v~------------------------~~~~~~~~~~~~~~dVf~~v~plV~~~l~ 321 (860)
.|||||||||||+++.|...+...++. |.++..+.....+.+||.++.|+|+++++
T Consensus 4 kgnIrV~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~vf~~v~~lv~~~l~ 83 (349)
T 3t0q_A 4 RGNIRVYCRVRPPLLNEPQDMSHILIEKFNEAKGAQSLTINRNEGRILSYNFQFDMIFEPSHTNKEIFEEIRQLVQSSLD 83 (349)
T ss_dssp -CEEEEEEEECCCCTTSCCCCTTEEECCCBC--CBEEEEEEECC--CEEEEEEESEEECTTCCHHHHHHHHHHHHHGGGT
T ss_pred CCCcEEEEEeCCCCccccccCceEEEeeccCCCCceEEEEcCCCCcccceeeecCEEECCCccHHHHHHHHHHHHHHHHC
Confidence 599999999999999887665444332 22222222223335678788999999999
Q ss_pred CccEEEEeeccCCCCccccccCCCCCCCchhhHHHHHHHHHHHh-cCCceEEEEEEEEEEeccccccccCCCC-------
Q 037169 322 GYNVCIFAYGQTGTGKTFTMEGTQQNRGVNYRTLELLFKIAEER-KETFTYSISVSALEVYNEQIRDLLDTSP------- 393 (860)
Q Consensus 322 G~N~~IfaYGqTGSGKTyTM~G~~~~~GIipRal~~LF~~~~~~-~~~~~~~V~vS~lEIYnE~i~DLL~~~~------- 393 (860)
|||+||||||||||||||||+|+ ++|||||++++||+.+... ...+.|.|+|||+|||||.|+|||++..
T Consensus 84 G~n~tifAYGqTGSGKTyTm~g~--~~Giipr~~~~lF~~~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~ 161 (349)
T 3t0q_A 84 GYNVCIFAYGQTGSGKTYTMLNA--GDGMIPMTLSHIFKWTANLKERGWNYEMECEYIEIYNETILDLLRDFKSHDNIDE 161 (349)
T ss_dssp TCEEEEEEECSTTSSHHHHHHST--TTSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTC----------
T ss_pred CcceeEEEeCCCCCCCceEeCCC--CCchhhHHHHHHHHHHHHhhhcCceeEEEEEEEEEEcchhhcccccccccccccc
Confidence 99999999999999999999997 4699999999999998864 4468999999999999999999998643
Q ss_pred --CCCceEEEecC-CCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccCCceeEe
Q 037169 394 --TSKKLEIRQAS-EGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLINGECTKS 470 (860)
Q Consensus 394 --~~~~l~i~~~~-~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~~~~~~s 470 (860)
....+.|++++ .++++|+|++++.|.|++|++.+|..|.++|++++|.||.+|||||+||+|+|.+.+...+....|
T Consensus 162 ~~~~~~~~i~~~~~~~g~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~ 241 (349)
T 3t0q_A 162 ILDSQKHDIRHDHEKQGTYITNVTRMKMTSTSQVDTILKKASKMRSTAATRSNERSSRSHSVFMVHINGRNLHTGETSQG 241 (349)
T ss_dssp -----CCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHC------------CTGGGSEEEEEEEEEEEETTTCCEEEE
T ss_pred ccccccceeEEecCCCCEEEeCCEEEEeCCHHHHHHHHHHHHHhCcccccccccccCCcceEEEEEEEEEecCCCCeeEE
Confidence 24567788765 467999999999999999999999999999999999999999999999999999999888888999
Q ss_pred eEEEeecCCcccccccccchhchHHHhHhhhhHHHHHHHHHHhccCCC---cccCCCCcchhhcccccCCCcceeEEEec
Q 037169 471 KLWLVDLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISSLATKSG---HIPYRNSKLTHLLQDSLGGDSKTLMFLQI 547 (860)
Q Consensus 471 kL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~---hVPYRdSKLT~LLqdsLgGnskT~mI~~V 547 (860)
+|+|||||||||..++++.|+|++|+.+||+||++||+||.||+.+.. ||||||||||+||||+||||++|+||+||
T Consensus 242 kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgGnskt~mi~~v 321 (349)
T 3t0q_A 242 KLNLVDLAGSERINSSAVTGERLRETQNINKSLSCLGDVIYALNTPDAGKRYIPFRNSKLTYLLQYSLVGDSKTLMFVNI 321 (349)
T ss_dssp EEEEEECCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCCCGGGSHHHHHHGGGSSTTCEEEEEEEE
T ss_pred EEEEEeCCCCCccccccCccccchhHHhhhHhHHHHHHHHHHHhcccCCCCcCCCcCCHHHHHHHHhcCCCceEEEEEEe
Confidence 999999999999999999999999999999999999999999987654 99999999999999999999999999999
Q ss_pred CCCCCCHHhHHHHHHHHHHhhcccccc
Q 037169 548 SPSEQDLGETLSSLNFASRVRGVELSP 574 (860)
Q Consensus 548 SP~~~~~~ETl~TL~fA~r~r~I~~~p 574 (860)
||+..+++||++||+||+|++.|+.+|
T Consensus 322 sP~~~~~~ETl~TL~fA~rv~~ik~~~ 348 (349)
T 3t0q_A 322 PPDPNHISETLNSLRFASKVNSTKIAK 348 (349)
T ss_dssp CCCGGGHHHHHHHHHHHHHHHC-----
T ss_pred CCchhhHHHHHHHHHHHHHhhhcccCC
Confidence 999999999999999999999998775
No 10
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=100.00 E-value=2.9e-83 Score=703.03 Aligned_cols=303 Identities=42% Similarity=0.628 Sum_probs=278.2
Q ss_pred CCCeEEEEEeCCCCchhhhCCCceEEEe-------------cCCCCCccceeEEEEecc-chhhHHHhhCCccEEEEeec
Q 037169 266 LGNIRVFCRCRPLSKEEASAGHAMVVDF-------------SAAKDGELGILTVDVFAD-ASPLVTSVLDGYNVCIFAYG 331 (860)
Q Consensus 266 ~gnIrV~~RvRP~~~~E~~~~~~~~v~~-------------~~~~~~~~~~~~~dVf~~-v~plV~~~l~G~N~~IfaYG 331 (860)
.|||||||||||+++.|...+...++.+ .++..+.....+.+||.+ +.|+|+++++|||+||||||
T Consensus 6 ~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sQ~~Vy~~~~~plv~~~l~G~n~tifAYG 85 (325)
T 1bg2_A 6 ECNIKVMCRFRPLNESEVNRGDKYIAKFQGEDTVVIASKPYAFDRVFQSSTSQEQVYNDCAKKIVKDVLEGYNGTIFAYG 85 (325)
T ss_dssp SCEEEEEEEECCCCHHHHHHTCCBCCEEETTTEEEETTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEEEEEEC
T ss_pred CCCEEEEEEcCCCChhHhccCCeeEEEECCCCeEEECCEEEECCeEeCCCCCHHHHHHHHhhhhHHHHhCCCeEEEEEEC
Confidence 4999999999999999987665544433 333333334445677877 68999999999999999999
Q ss_pred cCCCCccccccCCCC---CCCchhhHHHHHHHHHHHhcCCceEEEEEEEEEEeccccccccCCCCCCCceEEEecCCCce
Q 037169 332 QTGTGKTFTMEGTQQ---NRGVNYRTLELLFKIAEERKETFTYSISVSALEVYNEQIRDLLDTSPTSKKLEIRQASEGFH 408 (860)
Q Consensus 332 qTGSGKTyTM~G~~~---~~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~~~l~i~~~~~g~~ 408 (860)
||||||||||+|+.. ++|||||++++||+.+......+.|.|+|||+|||||+|+|||++ ....+.+++++.+++
T Consensus 86 qTGSGKTyTm~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~--~~~~l~i~e~~~~~~ 163 (325)
T 1bg2_A 86 QTSSGKTHTMEGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDV--SKTNLSVHEDKNRVP 163 (325)
T ss_dssp STTSSHHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHHCSSEEEEEEEEEEEEETTEEEESSCT--TCCSBCEEECTTSCE
T ss_pred CCCCCCceEecccCCCcccCccHHHHHHHHHHHHHhccCCceEEEEEEEEEEecCeeeecccC--CCCCceEEECCCCCE
Confidence 999999999999754 459999999999999998888899999999999999999999985 346799999999999
Q ss_pred EecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccCCceeEeeEEEeecCCccccccccc
Q 037169 409 HVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLINGECTKSKLWLVDLAGSERLAKTEV 488 (860)
Q Consensus 409 ~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~ 488 (860)
+|.|++++.|.|++|++.+|..|.++|++++|.+|.+|||||+||+|+|.+.+...+....|+|+|||||||||..++++
T Consensus 164 ~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~ 243 (325)
T 1bg2_A 164 YVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQTEQKLSGKLYLVDLAGSEKVSKTGA 243 (325)
T ss_dssp EETTCCCEEECSHHHHHHHHHHHHHHTTTTCSCHHHHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECCCSCCCCCCSS
T ss_pred EecCceEEeCCCHHHHHHHHHHHHhhCceeecCCCCCCCCCeEEEEEEEEEEecCCCcEEEEEEEEEECCCCCcccccCC
Confidence 99999999999999999999999999999999999999999999999999988877778899999999999999999999
Q ss_pred chhchHHHhHhhhhHHHHHHHHHHhccCCCcccCCCCcchhhcccccCCCcceeEEEecCCCCCCHHhHHHHHHHHHHhh
Q 037169 489 QGERLKEAQNINRSLSALGDVISSLATKSGHIPYRNSKLTHLLQDSLGGDSKTLMFLQISPSEQDLGETLSSLNFASRVR 568 (860)
Q Consensus 489 ~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP~~~~~~ETl~TL~fA~r~r 568 (860)
.|.|++|+.+||+||++||+||.||+.+..||||||||||+||||+||||++|+||+||||+..+++||++||+||+|||
T Consensus 244 ~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGns~t~mia~vsP~~~~~~ETl~TL~fa~rak 323 (325)
T 1bg2_A 244 EGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAK 323 (325)
T ss_dssp SCTTSCCCCCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHGGGTSSSSCEEEEEEEECCBGGGHHHHHHHHHHHHTSC
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHcCCCCCcccccHHHHHHHHHhCCCCcEEEEEEECCccccHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cc
Q 037169 569 GV 570 (860)
Q Consensus 569 ~I 570 (860)
+|
T Consensus 324 ~I 325 (325)
T 1bg2_A 324 TI 325 (325)
T ss_dssp CC
T ss_pred cC
Confidence 86
No 11
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=100.00 E-value=8e-83 Score=706.74 Aligned_cols=312 Identities=40% Similarity=0.646 Sum_probs=284.9
Q ss_pred CCCeEEEEEeCCCCchhhhCCCceEEEecCCC-----------------CCccceeEEEEecc-chhhHHHhhCCccEEE
Q 037169 266 LGNIRVFCRCRPLSKEEASAGHAMVVDFSAAK-----------------DGELGILTVDVFAD-ASPLVTSVLDGYNVCI 327 (860)
Q Consensus 266 ~gnIrV~~RvRP~~~~E~~~~~~~~v~~~~~~-----------------~~~~~~~~~dVf~~-v~plV~~~l~G~N~~I 327 (860)
.|||||+|||||+++.|...+...++.+.... .+.....+.+||.. +.|+|+++++|||+||
T Consensus 5 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~ti 84 (355)
T 1goj_A 5 ANSIKVVARFRPQNRVEIESGGQPIVTFQGPDTCTVDSKEAQGSFTFDRVFDMSCKQSDIFDFSIKPTVDDILNGYNGTV 84 (355)
T ss_dssp SCBCEEEEEECCCCHHHHTTTCCBCEEECSTTEEEECSTTCCEEEECSEEECTTCCHHHHHHHHTHHHHHHHTTTCCEEE
T ss_pred CCCeEEEEECCCCChHHhhcCCceEEEEcCCCeEEEccCCCccEEeeCeEECCCCccHHHHHHHHHHHHHHHhCCCcceE
Confidence 48999999999999999877766666554321 12222233457764 8999999999999999
Q ss_pred EeeccCCCCccccccCC----CCCCCchhhHHHHHHHHHHHhcCCceEEEEEEEEEEeccccccccCCCCCCCceEEEec
Q 037169 328 FAYGQTGTGKTFTMEGT----QQNRGVNYRTLELLFKIAEERKETFTYSISVSALEVYNEQIRDLLDTSPTSKKLEIRQA 403 (860)
Q Consensus 328 faYGqTGSGKTyTM~G~----~~~~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~~~l~i~~~ 403 (860)
||||||||||||||+|+ +.++|||||++++||+.+......+.|.|+|||+|||||.|+|||++. ...+.++++
T Consensus 85 fAYGqTGSGKTyTm~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~--~~~l~i~e~ 162 (355)
T 1goj_A 85 FAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQ--NDNLPVHEE 162 (355)
T ss_dssp EEECSTTSSHHHHHTBSCTTSTTTBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTT--CCSCCEEEE
T ss_pred EEECCCCCCcceEeecCCCCCcccCCchHHHHHHHHHHHHhcccCceEEEEEEEEEEECCEEEEcccCc--cCCceeEEc
Confidence 99999999999999996 466899999999999999887788999999999999999999999853 457899999
Q ss_pred CCCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccCCceeEeeEEEeecCCcccc
Q 037169 404 SEGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLINGECTKSKLWLVDLAGSERL 483 (860)
Q Consensus 404 ~~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~~~~~~skL~lVDLAGSEr~ 483 (860)
+.++++|+|++++.|.|++|++.+|..|.++|++++|.||.+|||||+||+|+|.+.+...+....|+|+|||||||||.
T Consensus 163 ~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSEr~ 242 (355)
T 1goj_A 163 KNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVETGSAKSGQLFLVDLAGSEKV 242 (355)
T ss_dssp TTTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETTTTEEEEEEEEEEECCCCSCC
T ss_pred CCCCEeecCCEEEeCCCHHHHHHHHHHHHhhcCcccccCCCCCCCceEEEEEEEEEeccCCCceeeeEEEEEECCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999888888888999999999999999
Q ss_pred cccccchhchHHHhHhhhhHHHHHHHHHHhccC-CCcccCCCCcchhhcccccCCCcceeEEEecCCCCCCHHhHHHHHH
Q 037169 484 AKTEVQGERLKEAQNINRSLSALGDVISSLATK-SGHIPYRNSKLTHLLQDSLGGDSKTLMFLQISPSEQDLGETLSSLN 562 (860)
Q Consensus 484 ~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~-~~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP~~~~~~ETl~TL~ 562 (860)
.++++.|.+++|+.+||+||++||+||.||+.+ ..||||||||||+||||+||||++|+||+||||+..+++||++||+
T Consensus 243 ~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGns~t~mI~~isP~~~~~~ETl~TL~ 322 (355)
T 1goj_A 243 GKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLR 322 (355)
T ss_dssp TTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHCSCSCCCGGGCHHHHHTGGGTTSSCEEEEEEEECCBGGGHHHHHHHHH
T ss_pred cccccchhhHHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCccCHHHHHHHHHhCCCCcEEEEEEECcccccHHHHHHHHH
Confidence 999999999999999999999999999999975 5899999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccccccccc
Q 037169 563 FASRVRGVELSPARKQI 579 (860)
Q Consensus 563 fA~r~r~I~~~p~~~~~ 579 (860)
||+|++.|++.|..+..
T Consensus 323 fA~rak~I~n~~~vn~~ 339 (355)
T 1goj_A 323 FGMRAKSIKNKAKVNAE 339 (355)
T ss_dssp HHHHHHTCBCCCCCCSS
T ss_pred HHHHHhhccCCceeCCC
Confidence 99999999999987754
No 12
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=100.00 E-value=1.8e-82 Score=702.51 Aligned_cols=313 Identities=38% Similarity=0.549 Sum_probs=271.9
Q ss_pred CCCeEEEEEeCCCCchhhhCCCceEE----------------EecCCCCCccceeEEEEecc-chhhHHHhhCCccEEEE
Q 037169 266 LGNIRVFCRCRPLSKEEASAGHAMVV----------------DFSAAKDGELGILTVDVFAD-ASPLVTSVLDGYNVCIF 328 (860)
Q Consensus 266 ~gnIrV~~RvRP~~~~E~~~~~~~~v----------------~~~~~~~~~~~~~~~dVf~~-v~plV~~~l~G~N~~If 328 (860)
.|+|||||||||++..|...+...++ .|.++..+.....+.+||.. +.|+|+++++|||+|||
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~~~~~~~~F~FD~Vf~~~~tQ~~Vy~~~~~plv~~~l~G~n~tif 82 (349)
T 1t5c_A 3 EGAVAVCVRVRPLNSREESLGETAQVYWKTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIF 82 (349)
T ss_dssp CCCEEEEEEECCCSCSSCTTTTCCCCCEEEETTEEEETTSSCEEECSCEECTTSCHHHHHHHTTHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEEECCCCChhhhccCCCcEEEEeCCCCeEEECCCCeEEECCEEECCCCCHHHHHHHHHHHHHHHHHcCCcccee
Confidence 59999999999999988754433221 12233333333445678877 57999999999999999
Q ss_pred eeccCCCCccccccCCCCCCCchhhHHHHHHHHHHHhcCCceEEEEEEEEEEeccccccccCCCCCCCceEEEecCCCce
Q 037169 329 AYGQTGTGKTFTMEGTQQNRGVNYRTLELLFKIAEERKETFTYSISVSALEVYNEQIRDLLDTSPTSKKLEIRQASEGFH 408 (860)
Q Consensus 329 aYGqTGSGKTyTM~G~~~~~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~~~l~i~~~~~g~~ 408 (860)
|||||||||||||+|+++++|||||++++||+.+... ....|.|+|||+|||||.|+|||++.+..+.+.|++++.+++
T Consensus 83 AYGqTGSGKTyTM~G~~~~~Giipr~~~~lF~~i~~~-~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~ed~~~~~ 161 (349)
T 1t5c_A 83 AYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKF-PDREFLLRVSYMEIYNETITDLLCGTQKMKPLIIREDVNRNV 161 (349)
T ss_dssp EEESTTSSHHHHHTBCSSSBCHHHHHHHHHHHHGGGC-TTEEEEEEEEEEEEETTEEEESSSSSCTTCCEEEEETTTTEE
T ss_pred eecCCCCCCCeEEecCCCCCchHHHHHHHHHHHHHhC-cCCcEEEEEEEEEEeCCEEEEccCCCCCCCCceEEECCCCCE
Confidence 9999999999999999999999999999999999764 357899999999999999999998776677899999999999
Q ss_pred EecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccC-----CceeEeeEEEeecCCcccc
Q 037169 409 HVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLIN-----GECTKSKLWLVDLAGSERL 483 (860)
Q Consensus 409 ~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~-----~~~~~skL~lVDLAGSEr~ 483 (860)
+|.|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|.|...+... +....|+|+|||||||||.
T Consensus 162 ~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~ 241 (349)
T 1t5c_A 162 YVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVDLAGSERA 241 (349)
T ss_dssp EETTCCCEECSSHHHHHHHHHHHHHTTSSSSSSSSCTTTTCEEEEEEEEEEEECC-------CEEEEEEEEEECCCGGGT
T ss_pred EecCCEEEEeCCHHHHHHHHHHhhcccccccccCCCCCCCceEEEEEEEEEeccCCCcCcCccEEEEEEEEEECCCCccc
Confidence 99999999999999999999999999999999999999999999999998876432 3457899999999999999
Q ss_pred cccccchhchHHHhHhhhhHHHHHHHHHHhccCC--CcccCCCCcchhhcccccCCCcceeEEEecCCCCCCHHhHHHHH
Q 037169 484 AKTEVQGERLKEAQNINRSLSALGDVISSLATKS--GHIPYRNSKLTHLLQDSLGGDSKTLMFLQISPSEQDLGETLSSL 561 (860)
Q Consensus 484 ~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~--~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP~~~~~~ETl~TL 561 (860)
.++++.|.|++|+.+||+||++||+||.+|+.++ .||||||||||+||||+||||++|+||+||||. +++||++||
T Consensus 242 ~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~--~~~ETlsTL 319 (349)
T 1t5c_A 242 AQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLTAL 319 (349)
T ss_dssp C-------CCCSSSCCCHHHHHHHHHHHHHHHTCCTTSSCGGGSHHHHHTGGGTTSSSEEEEEEEECTT--CSHHHHHHH
T ss_pred cccCCccccchhhhHHhHHHHHHHHHHHHHhccCCCCCCcccccHHHHHHHHhcCCCceEEEEEEeCCC--CHHHHHHHH
Confidence 9999999999999999999999999999999764 699999999999999999999999999999997 689999999
Q ss_pred HHHHHhhcccccccccccCh
Q 037169 562 NFASRVRGVELSPARKQIDI 581 (860)
Q Consensus 562 ~fA~r~r~I~~~p~~~~~~~ 581 (860)
+||+|++.|++.|..+....
T Consensus 320 ~fA~rak~I~n~~~vn~~~~ 339 (349)
T 1t5c_A 320 QFASTAKYMKNTPYVNEVST 339 (349)
T ss_dssp HHHHHHTTCCCCCCCCEEC-
T ss_pred HHHHHHhhcccCceeccCCC
Confidence 99999999999999876543
No 13
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=100.00 E-value=1.1e-82 Score=706.14 Aligned_cols=301 Identities=40% Similarity=0.593 Sum_probs=242.3
Q ss_pred CCeEEEEEeCCCCchhhhCCCceEEEec--------C------------------------------CCCCccceeEEEE
Q 037169 267 GNIRVFCRCRPLSKEEASAGHAMVVDFS--------A------------------------------AKDGELGILTVDV 308 (860)
Q Consensus 267 gnIrV~~RvRP~~~~E~~~~~~~~v~~~--------~------------------------------~~~~~~~~~~~dV 308 (860)
|||||+|||||++..|...+...++... + +..+.....+.+|
T Consensus 10 ~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~FD~vf~~~~~Q~~V 89 (355)
T 3lre_A 10 HHMKVVVRVRPENTKEKAAGFHKVVHVVDKHILVFDPKQEEVSFFHGKKTTNQNVIKKQNKDLKFVFDAVFDETSTQSEV 89 (355)
T ss_dssp --CEEEEEECCCCHHHHHTTCCBSEEECSSSEEEEC------------------------CCEEEECSEEECTTCCHHHH
T ss_pred CCCEEEEEeCcCChHHHhcCCceEEEecCCceEEecCCCCcceeecccccccccchhccCCCceEEeceEECCCCChHHH
Confidence 9999999999999999877665444321 1 1111111122456
Q ss_pred ecc-chhhHHHhhCCccEEEEeeccCCCCccccccCCCCCCCchhhHHHHHHHHHHHhcCCceEEEEEEEEEEecccccc
Q 037169 309 FAD-ASPLVTSVLDGYNVCIFAYGQTGTGKTFTMEGTQQNRGVNYRTLELLFKIAEERKETFTYSISVSALEVYNEQIRD 387 (860)
Q Consensus 309 f~~-v~plV~~~l~G~N~~IfaYGqTGSGKTyTM~G~~~~~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~i~D 387 (860)
|.. +.|+|+++++|||+||||||||||||||||+|++.++|||||++.+||+.+........|.|.|||+|||||.|+|
T Consensus 90 y~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~~~~~~~~v~vS~~EIYnE~i~D 169 (355)
T 3lre_A 90 FEHTTKPILRSFLNGYNCTVLAYGATGAGKTHTMLGSADEPGVMYLTMLHLYKCMDEIKEEKICSTAVSYLEVYNEQIRD 169 (355)
T ss_dssp HHTTHHHHHHHHTTTCCEEEEEECCTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHhCCCceEEEEeCCCCCCceeeeccCCCCCCeeehhhhHHHHhhhhhccCceEEEEEEEEEEECCEEEE
Confidence 666 5899999999999999999999999999999999999999999999999999888888999999999999999999
Q ss_pred ccCCCCCCCceEEEecCCCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccC---
Q 037169 388 LLDTSPTSKKLEIRQASEGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLIN--- 464 (860)
Q Consensus 388 LL~~~~~~~~l~i~~~~~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~--- 464 (860)
||++ ...+.+++++.++++|+|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+.+...
T Consensus 170 LL~~---~~~l~ire~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~ 246 (355)
T 3lre_A 170 LLVN---SGPLAVREDTQKGVVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNATSSRSHAVFQIYLRQQDKTASIN 246 (355)
T ss_dssp SSSC---CCCBEEEECTTSCEEEETCCCBCCCSHHHHHHHHHHHHHTSCBC-----CBCTTCEEEEEEEEEEEETTSCTT
T ss_pred CcCC---CCCceeEEcCCCCEEeeeeeEEecCCHHHHHHHHHHHHhcCCcccccCcCCCCCCcEEEEEEEEEecCCCCCC
Confidence 9974 3579999999999999999999999999999999999999999999999999999999999999876532
Q ss_pred CceeEeeEEEeecCCcccccccccchhchHHHhHhhhhHHHHHHHHHHhccC---CCcccCCCCcchhhcccccCCCcce
Q 037169 465 GECTKSKLWLVDLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISSLATK---SGHIPYRNSKLTHLLQDSLGGDSKT 541 (860)
Q Consensus 465 ~~~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~---~~hVPYRdSKLT~LLqdsLgGnskT 541 (860)
.....|+|+|||||||||..++++.|.|++|+.+||+||++||+||.||+++ ..||||||||||+||||+|||||+|
T Consensus 247 ~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lL~dsLgGnskt 326 (355)
T 3lre_A 247 QNVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLLALGNVINALADSKRKNQHIPYRNSKLTRLLKDSLGGNCQT 326 (355)
T ss_dssp CCCCCEEEEEEECCCCCC-----------------CHHHHHHHHHHHHHC--------CCGGGSHHHHHTTTTSSTTSEE
T ss_pred CCEEEEEEEEEECCCCCcCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCCcccCHHHHHHHHhcCCCceE
Confidence 3346799999999999999999999999999999999999999999999874 4599999999999999999999999
Q ss_pred eEEEecCCCCCCHHhHHHHHHHHHHhhcc
Q 037169 542 LMFLQISPSEQDLGETLSSLNFASRVRGV 570 (860)
Q Consensus 542 ~mI~~VSP~~~~~~ETl~TL~fA~r~r~I 570 (860)
+||+||||+..+++||++||+||+|||+|
T Consensus 327 ~mIa~isP~~~~~~ETl~TL~fA~rak~I 355 (355)
T 3lre_A 327 IMIAAVSPSSVFYDDTYNTLKYANRAKDI 355 (355)
T ss_dssp EEEEEECCBGGGHHHHHHHHHHHHHTC--
T ss_pred EEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999976
No 14
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=100.00 E-value=3.7e-82 Score=718.73 Aligned_cols=316 Identities=39% Similarity=0.586 Sum_probs=259.8
Q ss_pred cCCCeEEEEEeCCCCchhhhCCCceEEEecCCCC-----------------------CccceeE----------------
Q 037169 265 VLGNIRVFCRCRPLSKEEASAGHAMVVDFSAAKD-----------------------GELGILT---------------- 305 (860)
Q Consensus 265 ~~gnIrV~~RvRP~~~~E~~~~~~~~v~~~~~~~-----------------------~~~~~~~---------------- 305 (860)
..|||||||||||+++.|...+...++.++.... .....|+
T Consensus 36 ~~~~vrV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~F~FD~vF~~~~~~~~~~a 115 (443)
T 2owm_A 36 PGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQETDFADARGARSRRVLEEKSFTFDKSFWSHNTEDEHYA 115 (443)
T ss_dssp CCEECEEEEEEECCCHHHHHTTCCCCEEECSSSCEEEECCCC---------------CCCEEEECSEEEEESCTTSTTCC
T ss_pred CCCCeEEEEEeCCCChHHhhcCCceEEEEcCCCccEEEecCCCcccccccccccccccCCceEecCeEeCCCCcCCccCC
Confidence 4589999999999999998777655555433110 0011122
Q ss_pred --EEEecc-chhhHHHhhCCccEEEEeeccCCCCccccccCCCCCCCchhhHHHHHHHHHHHh---cCCceEEEEEEEEE
Q 037169 306 --VDVFAD-ASPLVTSVLDGYNVCIFAYGQTGTGKTFTMEGTQQNRGVNYRTLELLFKIAEER---KETFTYSISVSALE 379 (860)
Q Consensus 306 --~dVf~~-v~plV~~~l~G~N~~IfaYGqTGSGKTyTM~G~~~~~GIipRal~~LF~~~~~~---~~~~~~~V~vS~lE 379 (860)
.+||.. +.|+|+++|+|||+||||||||||||||||+|+++++|||||++++||+.+... ..++.|.|+|||+|
T Consensus 116 sQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQTGSGKTyTM~G~~~~~GIipr~~~~lF~~i~~~~~~~~~~~~~V~vS~lE 195 (443)
T 2owm_A 116 TQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTPDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFE 195 (443)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEEEEESSTTSSHHHHHTCCTTSCCHHHHHHHHHHHHHHHTTTTSTTCEEEEEEEEEE
T ss_pred CHHHHHHhhhhhHHHHhhcCCceEEEEeCCCCCCCCEEeecCCCCCchHHHHHHHHHHHHHhhhcccCCceEEEEEEEEE
Confidence 234554 479999999999999999999999999999999999999999999999999864 34689999999999
Q ss_pred EeccccccccCCCC---CCCceEEEecCCCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEE
Q 037169 380 VYNEQIRDLLDTSP---TSKKLEIRQASEGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCIS 456 (860)
Q Consensus 380 IYnE~i~DLL~~~~---~~~~l~i~~~~~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~ 456 (860)
||||.|+|||++.. ....|.|++++.++++|.|++++.|.|++|++.+|..|.++|++++|.||.+|||||+||+|+
T Consensus 196 IYnE~i~DLL~~~~~~~~~~~l~ire~~~~g~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~ 275 (443)
T 2owm_A 196 VYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTSSRSHAVFTIM 275 (443)
T ss_dssp EETTEEEETTSCCCSSCCCCCCEEEEETTTEEEEETCCCEECCSHHHHHHHHHHHHTTSCBCSSSSSCBCTTEEEEEEEE
T ss_pred EECCEeeEccCccccCCcccccceeECCCCCEeccCCEEEEcCCHHHHHHHHHHHHhhCCcccCcCCCccCCCeEEEEEE
Confidence 99999999998632 234699999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecc----CCceeEeeEEEeecCCcccccccccchhchHHHhHhhhhHHHHHHHHHHhccCC---------------
Q 037169 457 VKAKNLI----NGECTKSKLWLVDLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISSLATKS--------------- 517 (860)
Q Consensus 457 v~~~~~~----~~~~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~--------------- 517 (860)
|.+.... ......|+|+|||||||||..++++.|.|++|+.+||+||++||+||.||+.+.
T Consensus 276 v~~~~~~~~~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~g~~ 355 (443)
T 2owm_A 276 LKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSASRPSSPVKSGRG 355 (443)
T ss_dssp EEEEC-------CCEEEEEEEEEECCCCCC--------------CCSSHHHHHHHHHHHHHCC-----------------
T ss_pred EEEeecccCCCCcceEEEEEEEEECCCCccccccCCccccccchhhhcHHHHHHHHHHHHHhcccccccccccccccccc
Confidence 9875421 233567999999999999999999999999999999999999999999998643
Q ss_pred -------CcccCCCCcchhhcccccCCCcceeEEEecCCCCCCHHhHHHHHHHHHHhhcccccccccccChH
Q 037169 518 -------GHIPYRNSKLTHLLQDSLGGDSKTLMFLQISPSEQDLGETLSSLNFASRVRGVELSPARKQIDIS 582 (860)
Q Consensus 518 -------~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP~~~~~~ETl~TL~fA~r~r~I~~~p~~~~~~~~ 582 (860)
.||||||||||+||||+||||++|+||+||||+ +++||++||+||+|++.|++.|..+.++..
T Consensus 356 ~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ETlsTLrfA~rak~I~n~~~vN~~d~~ 425 (443)
T 2owm_A 356 RTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRYADQAKRIRTRAVVNQVDGV 425 (443)
T ss_dssp --------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHHHHHHHHHHHHTTCEECCCCCCC---
T ss_pred cccccCCCcccCcccHhHHHHHHhhCCCCcEEEEEEeccc--cHHHHHHHHHHHHHHhhccccceecccCCc
Confidence 389999999999999999999999999999997 699999999999999999999999886543
No 15
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=100.00 E-value=3.9e-82 Score=699.75 Aligned_cols=308 Identities=46% Similarity=0.659 Sum_probs=253.3
Q ss_pred CCCeEEEEEeCCCCc-hhhhCCCceEE------------------------EecCCCCCccceeEEEEeccchhhHHHhh
Q 037169 266 LGNIRVFCRCRPLSK-EEASAGHAMVV------------------------DFSAAKDGELGILTVDVFADASPLVTSVL 320 (860)
Q Consensus 266 ~gnIrV~~RvRP~~~-~E~~~~~~~~v------------------------~~~~~~~~~~~~~~~dVf~~v~plV~~~l 320 (860)
.|||||||||||+++ .|........+ .|.++..+.....+.+||.++.|+|++++
T Consensus 2 k~nIrV~vRvRP~~~~~e~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~v~~lv~~~l 81 (347)
T 1f9v_A 2 RGNIRVYCRIRPALKNLENSDTSLINVNEFDDNSGVQSMEVTKIQNTAQVHEFKFDKIFDQQDTNVDVFKEVGQLVQSSL 81 (347)
T ss_dssp -CEEEEEEEECCCCTTTCCCTTEEEEECCCBTTTTBEEEEEEEGGGTTCEEEEEESEEECTTCCHHHHHHHHHHHHGGGG
T ss_pred CCCeEEEEEeCCCCcccccCCCceEEEecccCCCCceEEEEecCCCCcCceEEeeCEEECCCCCHHHHHHHHHHHHHHhc
Confidence 499999999999987 34221111111 12222222222333567877899999999
Q ss_pred CCccEEEEeeccCCCCccccccCCCCCCCchhhHHHHHHHHHHHhc-CCceEEEEEEEEEEeccccccccCCCCC-----
Q 037169 321 DGYNVCIFAYGQTGTGKTFTMEGTQQNRGVNYRTLELLFKIAEERK-ETFTYSISVSALEVYNEQIRDLLDTSPT----- 394 (860)
Q Consensus 321 ~G~N~~IfaYGqTGSGKTyTM~G~~~~~GIipRal~~LF~~~~~~~-~~~~~~V~vS~lEIYnE~i~DLL~~~~~----- 394 (860)
+|||+||||||||||||||||+|+ ++|||||++++||+.+.... ..+.|.|+|||+|||||.|+|||++...
T Consensus 82 ~G~n~tifAYGqTGSGKTyTM~G~--~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~ 159 (347)
T 1f9v_A 82 DGYNVCIFAYGQTGSGKTFTMLNP--GDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYNENIVDLLRSDNNNKEDT 159 (347)
T ss_dssp GTCCEEEEEECCTTSSHHHHHHST--TTSHHHHHHHHHHHHHHHHGGGTCEEEEEEEEEEEETTEEEETTC---------
T ss_pred CCceeEEEEECCCCCCCcEeccCC--CCCchHHHHHHHHHHHHhhhhcCCceEEEEEEEEEECCeeeeccCCcccccccc
Confidence 999999999999999999999996 47999999999999998643 4689999999999999999999986543
Q ss_pred --CCceEEEecC-CCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccCCceeEee
Q 037169 395 --SKKLEIRQAS-EGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLINGECTKSK 471 (860)
Q Consensus 395 --~~~l~i~~~~-~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~~~~~~sk 471 (860)
...+.+++++ .++++|.|++++.|.+++|++.+|..|.++|++++|.||.+|||||+||+|+|.+.+...+....|+
T Consensus 160 ~~~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~sk 239 (347)
T 1f9v_A 160 SIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASNEHSSASHSIFIIHLSGSNAKTGAHSYGT 239 (347)
T ss_dssp ----CCCEEEETTTTEEEETTCCCEECSSGGGHHHHHHHHC-----------CCGGGSEEEEEEEEEEECC--CCEEEEE
T ss_pred ccCCceeEEEecCCCceEecCCEEEEcCCHHHHHHHHHHHHhccceeeccCCCCCCCceEEEEEEEEEecCCCCceeeeE
Confidence 2357788764 5789999999999999999999999999999999999999999999999999999887778888999
Q ss_pred EEEeecCCcccccccccchhchHHHhHhhhhHHHHHHHHHHhccCC---CcccCCCCcchhhcccccCCCcceeEEEecC
Q 037169 472 LWLVDLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISSLATKS---GHIPYRNSKLTHLLQDSLGGDSKTLMFLQIS 548 (860)
Q Consensus 472 L~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~---~hVPYRdSKLT~LLqdsLgGnskT~mI~~VS 548 (860)
|+|||||||||..++++.|.|++|+.+||+||++||+||.||+.+. .||||||||||+||||+||||++|+||+|||
T Consensus 240 L~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgGnskt~mI~~vs 319 (347)
T 1f9v_A 240 LNLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNIS 319 (347)
T ss_dssp EEEEECCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHTSCC---CCCCGGGSHHHHHHHHHHSTTCEEEEEEEEC
T ss_pred EEEEECCCCccccccccchhhhHHHHHHhHHHHHHHHHHHHHhcccCCCCcCccccCHHHHHHHHHhCCCccEEEEEEeC
Confidence 9999999999999999999999999999999999999999999865 8999999999999999999999999999999
Q ss_pred CCCCCHHhHHHHHHHHHHhhccccccc
Q 037169 549 PSEQDLGETLSSLNFASRVRGVELSPA 575 (860)
Q Consensus 549 P~~~~~~ETl~TL~fA~r~r~I~~~p~ 575 (860)
|+..+++||++||+||+|+++|+++|.
T Consensus 320 P~~~~~~ETl~TLrfA~r~~~i~~~~r 346 (347)
T 1f9v_A 320 PSSSHINETLNSLRFASKVNSTRLVSR 346 (347)
T ss_dssp CSGGGHHHHHHHHHHHHHHCCTTTC--
T ss_pred CccccHHHHHHHHHHHHHHhhhccCCC
Confidence 999999999999999999999998874
No 16
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=100.00 E-value=1.5e-82 Score=705.95 Aligned_cols=311 Identities=39% Similarity=0.614 Sum_probs=257.6
Q ss_pred CCCeEEEEEeCCCCchhhhCCCceEEEecCC-----------------------CCCccceeEEEEecc-chhhHHHhhC
Q 037169 266 LGNIRVFCRCRPLSKEEASAGHAMVVDFSAA-----------------------KDGELGILTVDVFAD-ASPLVTSVLD 321 (860)
Q Consensus 266 ~gnIrV~~RvRP~~~~E~~~~~~~~v~~~~~-----------------------~~~~~~~~~~dVf~~-v~plV~~~l~ 321 (860)
.|||||||||||++..|...+...++.+++. ..+.....+.+||.+ +.|+|+++++
T Consensus 7 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~ 86 (359)
T 1x88_A 7 GKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADKSSRKTYTFDMVFGASTKQIDVYRSVVCPILDEVIM 86 (359)
T ss_dssp --CCEEEEEECCCCHHHHHTTCCCCEEEETTTTEEEEEEEEETTEEEEEEEECSEEECTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEeCCCChhhhhcCCceEEEEcCCCcEEEEeCCCccCCcCceEEeceEEEeccCchhHHHHHHHHHhHHHHhC
Confidence 4999999999999999987766555544332 111222223456766 5899999999
Q ss_pred CccEEEEeeccCCCCccccccCCCC-----------CCCchhhHHHHHHHHHHHhcCCceEEEEEEEEEEeccccccccC
Q 037169 322 GYNVCIFAYGQTGTGKTFTMEGTQQ-----------NRGVNYRTLELLFKIAEERKETFTYSISVSALEVYNEQIRDLLD 390 (860)
Q Consensus 322 G~N~~IfaYGqTGSGKTyTM~G~~~-----------~~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~ 390 (860)
|||+||||||||||||||||+|++. .+|||||++++||+.+.. ..+.|.|+|||+|||||.|+|||+
T Consensus 87 G~n~tifAYGqTGSGKTyTM~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~--~~~~~~v~vS~~EIYnE~i~DLL~ 164 (359)
T 1x88_A 87 GYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTD--NGTEFSVKVSLLEIYNEELFDLLN 164 (359)
T ss_dssp TCEEEEEEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTSS--SSEEEEEEEEEEEEETTEEEETTC
T ss_pred CCceEEEEeCCCCCCCceEEeccCCccccccccccccCCchHHHHHHHHHHHhc--cCceEEEEEEEEEEeCceeeehhc
Confidence 9999999999999999999999753 369999999999998864 468999999999999999999998
Q ss_pred CCCC-CCceEEEecCC--CceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeecc-CC-
Q 037169 391 TSPT-SKKLEIRQASE--GFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLI-NG- 465 (860)
Q Consensus 391 ~~~~-~~~l~i~~~~~--g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~-~~- 465 (860)
+.+. ...+.+++++. ++++|+|++++.|.|++|++.+|..|..+|++++|.||.+|||||+||+|+|...... ++
T Consensus 165 ~~~~~~~~l~i~~~~~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~~~~ 244 (359)
T 1x88_A 165 PSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTIDGE 244 (359)
T ss_dssp TTSCTTCCBEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEEEEEECTTSC
T ss_pred ccccccccceEEeccCCCCCEEEcCCEEEEcCCHHHHHHHHHHHHhhcccccccCCCCCCCccEEEEEEEEEecccCCCC
Confidence 7543 36799999874 7899999999999999999999999999999999999999999999999999876432 22
Q ss_pred -ceeEeeEEEeecCCcccccccccchhchHHHhHhhhhHHHHHHHHHHhccCCCcccCCCCcchhhcccccCCCcceeEE
Q 037169 466 -ECTKSKLWLVDLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISSLATKSGHIPYRNSKLTHLLQDSLGGDSKTLMF 544 (860)
Q Consensus 466 -~~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSKLT~LLqdsLgGnskT~mI 544 (860)
....|+|+|||||||||..++++.|.|++|+.+||+||++||+||.||+.+..||||||||||+||||+||||++|+||
T Consensus 245 ~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI 324 (359)
T 1x88_A 245 ELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSLGGRTRTSII 324 (359)
T ss_dssp EEEEEEEEEEEECCCCCC---------------CCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGGSSSSSEEEEE
T ss_pred ceEEEEEEEEEcCCCCCcccccCCcccchHHHhhhhHHHHHHHHHHHHHhcCCCCCccccchHHHHHHHHhCCCCeEEEE
Confidence 2457999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCHHhHHHHHHHHHHhhcccccccccc
Q 037169 545 LQISPSEQDLGETLSSLNFASRVRGVELSPARKQ 578 (860)
Q Consensus 545 ~~VSP~~~~~~ETl~TL~fA~r~r~I~~~p~~~~ 578 (860)
+||||+..+++||++||+||+|++.|++.|..++
T Consensus 325 a~vsP~~~~~~ETl~TLrfA~rak~I~n~p~vn~ 358 (359)
T 1x88_A 325 ATISPASLNLEETLSTLEYAHRAKNILNKPEVNQ 358 (359)
T ss_dssp EEECCCGGGHHHHHHHHHHHHHHTTCCCCCC---
T ss_pred EEECCCcccHHHHHHHHHHHHHHhhccCcceeCC
Confidence 9999999999999999999999999999998764
No 17
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=100.00 E-value=2.9e-82 Score=704.66 Aligned_cols=312 Identities=43% Similarity=0.675 Sum_probs=265.4
Q ss_pred CCCeEEEEEeCCCCchhhhCCCceEEEecCC-----------------------CCCccceeEEEEecc-chhhHHHhhC
Q 037169 266 LGNIRVFCRCRPLSKEEASAGHAMVVDFSAA-----------------------KDGELGILTVDVFAD-ASPLVTSVLD 321 (860)
Q Consensus 266 ~gnIrV~~RvRP~~~~E~~~~~~~~v~~~~~-----------------------~~~~~~~~~~dVf~~-v~plV~~~l~ 321 (860)
.+||||||||||+++.|...+...++.++.. ..+.....+.+||.+ +.|+|+++++
T Consensus 20 ~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~ 99 (372)
T 3b6u_A 20 SESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFDAVYDWNAKQFELYDETFRPLVDSVLQ 99 (372)
T ss_dssp -CBCEEEEEECCCCHHHHHTTCCBCEEEETTTTEEEECCTTCTTTCCCEEEECSEEECTTCCHHHHHHHTHHHHHHHHHT
T ss_pred CCCeEEEEEcCCCChhhhccCCceEEEEeCCCCEEEEECCCCCCCCCceEEEcCeEeCCcCchHHHHHHHHHHHHHHHhC
Confidence 4999999999999999987766555544321 111111222456766 6899999999
Q ss_pred CccEEEEeeccCCCCccccccCCC---CCCCchhhHHHHHHHHHHHhcCCceEEEEEEEEEEeccccccccCCCCCCCce
Q 037169 322 GYNVCIFAYGQTGTGKTFTMEGTQ---QNRGVNYRTLELLFKIAEERKETFTYSISVSALEVYNEQIRDLLDTSPTSKKL 398 (860)
Q Consensus 322 G~N~~IfaYGqTGSGKTyTM~G~~---~~~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~~~l 398 (860)
|||+||||||||||||||||+|+. +++|||||++++||..+.. ...+.|.|+|||+|||||.|+|||++.+ .+.+
T Consensus 100 G~n~tifAYGqTGSGKTyTM~G~~~~~~~~Giipr~~~~lF~~i~~-~~~~~~~v~vS~~EIYnE~i~DLL~~~~-~~~l 177 (372)
T 3b6u_A 100 GFNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVIPNSFDHIFTHISR-SQNQQYLVRASYLEIYQEEIRDLLSKDQ-TKRL 177 (372)
T ss_dssp TCCEEEEEEESTTSSHHHHHTBCTTSGGGBCHHHHHHHHHHHHHHT-CSSCEEEEEEEEEEEETTEEEETTSSCT-TCCB
T ss_pred CCeeeEEeecCCCCCCCEeEecCCCCcccCCcHHHHHHHHHHHhhh-ccCCceEEEEEEEEEeCCEEEECCCCCC-CCCc
Confidence 999999999999999999999964 4579999999999999986 4568999999999999999999998643 4579
Q ss_pred EEEecCCCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeecc---CCceeEeeEEEe
Q 037169 399 EIRQASEGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLI---NGECTKSKLWLV 475 (860)
Q Consensus 399 ~i~~~~~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~---~~~~~~skL~lV 475 (860)
.+++++.++++|+|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|...+.. ......|+|+||
T Consensus 178 ~i~e~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~~skL~lV 257 (372)
T 3b6u_A 178 ELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLDGENHIRVGKLNLV 257 (372)
T ss_dssp CEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC-----CCCEEEEEEEEE
T ss_pred eEEECCCCcEecCCCEEEEecCHHHHHHHHHHHHHhcCcccccCCCCCCcceEEEEEEEEEeecCCCCCcceEEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999886532 234578999999
Q ss_pred ecCCcccccccccchhchHHHhHhhhhHHHHHHHHHHhccCC-CcccCCCCcchhhcccccCCCcceeEEEecCCCCCCH
Q 037169 476 DLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISSLATKS-GHIPYRNSKLTHLLQDSLGGDSKTLMFLQISPSEQDL 554 (860)
Q Consensus 476 DLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~-~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP~~~~~ 554 (860)
|||||||..++++.|.|++|+.+||+||++||+||.||++++ .||||||||||+||||+||||++|+||+||||+..++
T Consensus 258 DLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~ 337 (372)
T 3b6u_A 258 DLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNV 337 (372)
T ss_dssp ECCCCCE----------EEEGGGCCHHHHHHHHHHHHHHCC---CCCGGGSHHHHHTTTTTTSSSEEEEEEEECCBGGGH
T ss_pred ECCCCccccccCcchhhhhhHhhhhhhHHHHHHHHHHHhcCCCCCCcccccHHHHHHHHhcCCCccEEEEEEeCCcccCH
Confidence 999999999999999999999999999999999999998754 6999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHhhccccccccccc
Q 037169 555 GETLSSLNFASRVRGVELSPARKQI 579 (860)
Q Consensus 555 ~ETl~TL~fA~r~r~I~~~p~~~~~ 579 (860)
+||++||+||+|++.|++.|..+..
T Consensus 338 ~ETlsTLrfA~rak~I~n~~~~n~~ 362 (372)
T 3b6u_A 338 EETLTTLRYANRAKNIKNKPRVNED 362 (372)
T ss_dssp HHHHHHHHHHHHHTTCBCCCCCCC-
T ss_pred HHHHHHHHHHHHHhhccccceecCC
Confidence 9999999999999999999988764
No 18
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=100.00 E-value=1.6e-81 Score=699.39 Aligned_cols=311 Identities=37% Similarity=0.581 Sum_probs=257.6
Q ss_pred CCCeEEEEEeCCCCchhhhCCCceEEEecCC--------------------CCCccc--------eeEEEEecc-chhhH
Q 037169 266 LGNIRVFCRCRPLSKEEASAGHAMVVDFSAA--------------------KDGELG--------ILTVDVFAD-ASPLV 316 (860)
Q Consensus 266 ~gnIrV~~RvRP~~~~E~~~~~~~~v~~~~~--------------------~~~~~~--------~~~~dVf~~-v~plV 316 (860)
.+||||||||||++..|...+...++.++.. ..+... ..+.+||.+ +.|+|
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~~~~~~~~~~~~f~FD~vf~~~~~~~~~~~asQ~~Vy~~~~~plv 82 (366)
T 2zfi_A 3 GASVKVAVRVRPFNSREMSRDSKCIIQMSGSTTTIVNPKQPKETPKSFSFDYSYWSHTSPEDINYASQKQVYRDIGEEML 82 (366)
T ss_dssp -CCEEEEEEECCCCHHHHHTTCCBCEEEETTEEEECCTTCTTSCCEEEECSEEEECSSCTTSSSCCCHHHHHHHTHHHHH
T ss_pred CCCcEEEEECCCCChhhccCCCCeEEEECCCcEEEeccCCCCCCceEEecceEeecCccccccccCcHHHHHHHHHHHHH
Confidence 5899999999999999987665544433221 111000 223456666 47999
Q ss_pred HHhhCCccEEEEeeccCCCCccccccCCC--CCCCchhhHHHHHHHHHHHhc-CCceEEEEEEEEEEeccccccccCCCC
Q 037169 317 TSVLDGYNVCIFAYGQTGTGKTFTMEGTQ--QNRGVNYRTLELLFKIAEERK-ETFTYSISVSALEVYNEQIRDLLDTSP 393 (860)
Q Consensus 317 ~~~l~G~N~~IfaYGqTGSGKTyTM~G~~--~~~GIipRal~~LF~~~~~~~-~~~~~~V~vS~lEIYnE~i~DLL~~~~ 393 (860)
+++++|||+||||||||||||||||+|++ .++|||||++++||+.+.... ..+.|.|+|||+|||||.|+|||++..
T Consensus 83 ~~~l~G~N~tifAYGqTGSGKTyTm~G~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~ 162 (366)
T 2zfi_A 83 QHAFEGYNVCIFAYGQTGAGKSYTMMGKQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNPKN 162 (366)
T ss_dssp HHHHTTCCEEEEEECSTTSSHHHHHTBCSGGGCBCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEEEETTCTTT
T ss_pred HHHhcCCeeEEEEeCCCCCCCceEeeCCCccCCCccHHHHHHHHHHHHhhcccCCeeEEEEEEEEEeeCCeEEEcccccc
Confidence 99999999999999999999999999984 578999999999999998653 468999999999999999999998643
Q ss_pred CCCceEEEecCCCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccCC----ceeE
Q 037169 394 TSKKLEIRQASEGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLING----ECTK 469 (860)
Q Consensus 394 ~~~~l~i~~~~~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~~----~~~~ 469 (860)
...+.|++++.++++|.|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|.|.+...... ....
T Consensus 163 -~~~l~ire~~~~g~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~ 241 (366)
T 2zfi_A 163 -KGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKV 241 (366)
T ss_dssp -CSCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECTTTTCEEEEE
T ss_pred -CCCceEEEcCCCCEEEeCCEEEEECCHHHHHHHHHHHhhccccccccCCCCCCcceEEEEEEEEEecccCCCCccceeE
Confidence 35799999999999999999999999999999999999999999999999999999999999987654322 2457
Q ss_pred eeEEEeecCCcccccccccchhchHHHhHhhhhHHHHHHHHHHhcc------------CCCcccCCCCcchhhcccccCC
Q 037169 470 SKLWLVDLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISSLAT------------KSGHIPYRNSKLTHLLQDSLGG 537 (860)
Q Consensus 470 skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~------------~~~hVPYRdSKLT~LLqdsLgG 537 (860)
|+|+|||||||||..++++.|.|++|+.+||+||++||+||.||+. +..||||||||||+||||+|||
T Consensus 242 skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~~hvPyRdSkLT~lLqdsLgG 321 (366)
T 2zfi_A 242 SKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGG 321 (366)
T ss_dssp EEEEEEECCCGGGC------CCCHHHHHHHHHHHHHHHHHHHHHHHHC--------------CCGGGSHHHHHTGGGSST
T ss_pred eEEEEEeCCCCccccccCCCccchhhhhhHhHHHHHHHHHHHHHHhcccccccccccccCCcccccccHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999986 3579999999999999999999
Q ss_pred CcceeEEEecCCCCCCHHhHHHHHHHHHHhhccccccccc
Q 037169 538 DSKTLMFLQISPSEQDLGETLSSLNFASRVRGVELSPARK 577 (860)
Q Consensus 538 nskT~mI~~VSP~~~~~~ETl~TL~fA~r~r~I~~~p~~~ 577 (860)
|++|+||+||||+..+++||++||+||+||+.|++.|...
T Consensus 322 nskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~~~~~ 361 (366)
T 2zfi_A 322 NSRTAMVAALSPADINYDETLSTLRYADRAKQIRNTVSVN 361 (366)
T ss_dssp TCEEEEEEEECCBGGGHHHHHHHHHHHHHTC---------
T ss_pred CceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccCCCCCC
Confidence 9999999999999999999999999999999999988754
No 19
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=100.00 E-value=3.6e-81 Score=692.03 Aligned_cols=302 Identities=40% Similarity=0.641 Sum_probs=250.1
Q ss_pred CCCeEEEEEeCCCCchhhhCCCceEEEec---------------CCCCCccceeEEEEecc-chhhHHHhhCCccEEEEe
Q 037169 266 LGNIRVFCRCRPLSKEEASAGHAMVVDFS---------------AAKDGELGILTVDVFAD-ASPLVTSVLDGYNVCIFA 329 (860)
Q Consensus 266 ~gnIrV~~RvRP~~~~E~~~~~~~~v~~~---------------~~~~~~~~~~~~dVf~~-v~plV~~~l~G~N~~Ifa 329 (860)
.++|||+|||||+++.|...+...++... ++..+.....+.+||.. +.|+|+++++|||+||||
T Consensus 10 ~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~vy~~~~~plv~~~l~G~n~tifA 89 (344)
T 4a14_A 10 EAPVRVALRVRPLLPKELLHGHQSCLQVEPGLGRVTLGRDRHFGFHVVLAEDAGQEAVYQACVQPLLEAFFEGFNATVFA 89 (344)
T ss_dssp CCCCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEETTTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEEEEE
T ss_pred ccceEEEEEecccchHHHhccCeeEEEEcCCCceEEecccceEEEEEEEecCcchhHHHHHHHHHHHHHHHhhcCeeEEE
Confidence 58999999999999999876655544332 22223333344667877 799999999999999999
Q ss_pred eccCCCCccccccCC------CCCCCchhhHHHHHHHHHHHhcCCceEEEEEEEEEEeccccccccCCCCCCCceEEEec
Q 037169 330 YGQTGTGKTFTMEGT------QQNRGVNYRTLELLFKIAEERKETFTYSISVSALEVYNEQIRDLLDTSPTSKKLEIRQA 403 (860)
Q Consensus 330 YGqTGSGKTyTM~G~------~~~~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~~~l~i~~~ 403 (860)
||||||||||||+|+ ++++|||||++++||+.+... ..+.|.|+|||+|||||.|+|||++.+..+.+.++++
T Consensus 90 YGqTGSGKTyTm~G~~~~~~~~~~~Giipr~~~~lF~~i~~~-~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~e~ 168 (344)
T 4a14_A 90 YGQTGSGKTYTMGEASVASLLEDEQGIVPRAMAEAFKLIDEN-DLLDCLVHVSYLEVYKEEFRDLLEVGTASRDIQLRED 168 (344)
T ss_dssp ESSTTSSHHHHHCC--------CCCCHHHHHHHHHHHHHHHC-TTSEEEEEEEEEEEETTEEEETTSSCCCGGGCEEEEC
T ss_pred ecccCCCceEeecccchhhhhhcccCCchHHHHHHHHhcccc-cceeeEEEEehhhhhHHHHHHHHHhccccccceeeec
Confidence 999999999999997 467999999999999999875 4679999999999999999999997777788999999
Q ss_pred CCCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeecc--------CCceeEeeEEEe
Q 037169 404 SEGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLI--------NGECTKSKLWLV 475 (860)
Q Consensus 404 ~~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~--------~~~~~~skL~lV 475 (860)
+.++++|.|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+.+.. .+....|+|+||
T Consensus 169 ~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~~~~~~~skl~lV 248 (344)
T 4a14_A 169 ERGNVVLCGVKEVDVEGLDEVLSLLEMGNAARHTGATHLNHLSSRSHTVFTVTLEQRGRAPSRLPRPAPGQLLVSKFHFV 248 (344)
T ss_dssp TTSCEEEESCCCEECCSHHHHHHHHHHHHHHHHC------CCGGGSEEEEEEEEEEEC------------CEEEEEEEEE
T ss_pred cCCCEEEEeeeeccccCHHHHHHHHHhcchhcccCcchhhhcccccceEEEEEeeeCCCCcccCCCccccceeeeeeeEE
Confidence 999999999999999999999999999999999999999999999999999999886532 234567999999
Q ss_pred ecCCcccccccccchhchHHHhHhhhhHHHHHHHHHHhccC---CCcccCCCCcchhhcccccCCCcceeEEEecCCCCC
Q 037169 476 DLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISSLATK---SGHIPYRNSKLTHLLQDSLGGDSKTLMFLQISPSEQ 552 (860)
Q Consensus 476 DLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~---~~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP~~~ 552 (860)
|||||||..++++.|.|++|+.+||+||++||+||.||+++ ..||||||||||+||||+||||++|+||+||||+..
T Consensus 249 DLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~vsP~~~ 328 (344)
T 4a14_A 249 DLAGSERVLKTGSTGERLKESIQINSSLLALGNVISALGDPQRRGSHIPYRDSKITRILKDSLGGNAKTVMIACVSPSSS 328 (344)
T ss_dssp ECCCCCCC--------------CCCSHHHHHHHHHHHHTCTTTTTSCCCGGGCHHHHHTTTSSSTTSEEEEEEEECCBGG
T ss_pred ecccchhhcccCCchhhhhhheeechhHHhhhhHHHhcCCccccCCCCCcchhhHHHHhHhhcCCCcceEEEEEeCCCcc
Confidence 99999999999999999999999999999999999999863 469999999999999999999999999999999999
Q ss_pred CHHhHHHHHHHHHHhh
Q 037169 553 DLGETLSSLNFASRVR 568 (860)
Q Consensus 553 ~~~ETl~TL~fA~r~r 568 (860)
+++||++||+||+|||
T Consensus 329 ~~~ETl~TL~fA~rAk 344 (344)
T 4a14_A 329 DFDETLNTLNYASRAQ 344 (344)
T ss_dssp GHHHHHHHHHHHHHTC
T ss_pred chhHHhhhhhhhhhcC
Confidence 9999999999999986
No 20
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=100.00 E-value=4.5e-81 Score=692.91 Aligned_cols=303 Identities=41% Similarity=0.631 Sum_probs=239.6
Q ss_pred CCeEEEEEeCCCCchhhhCCCceEEEecCCC---------------CCccceeE-------------------EEEecc-
Q 037169 267 GNIRVFCRCRPLSKEEASAGHAMVVDFSAAK---------------DGELGILT-------------------VDVFAD- 311 (860)
Q Consensus 267 gnIrV~~RvRP~~~~E~~~~~~~~v~~~~~~---------------~~~~~~~~-------------------~dVf~~- 311 (860)
.||||+|||||+++.|...+...++..+... ......+. .+||..
T Consensus 1 S~VkV~vRvRPl~~~E~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~k~F~FD~vF~~~d~~~~~~~a~Q~~vy~~~ 80 (354)
T 3gbj_A 1 SKVKVAVRIRPMNRRETDLHTKCVVDVDANKVILNPVNTNLSKGDARGQPKVFAYDHCFWSMDESVKEKYAGQDIVFKCL 80 (354)
T ss_dssp -CEEEEEEECCCCHHHHHHTCCBCEEEETTEEEECCC-----------CCEEEECSEEEECSCTTCTTTBCCHHHHHHHH
T ss_pred CCcEEEEECCCCChhhhccCCceEEEeCCCeEEEeCCccccccccccCCceEEEeeEEeccCccccccccccHHHHHHHh
Confidence 4899999999999999876555444332210 00011122 234444
Q ss_pred chhhHHHhhCCccEEEEeeccCCCCccccccCCCCCCCchhhHHHHHHHHHHHh-cCCceEEEEEEEEEEeccccccccC
Q 037169 312 ASPLVTSVLDGYNVCIFAYGQTGTGKTFTMEGTQQNRGVNYRTLELLFKIAEER-KETFTYSISVSALEVYNEQIRDLLD 390 (860)
Q Consensus 312 v~plV~~~l~G~N~~IfaYGqTGSGKTyTM~G~~~~~GIipRal~~LF~~~~~~-~~~~~~~V~vS~lEIYnE~i~DLL~ 390 (860)
+.|+|+++++|||+||||||||||||||||+|+++++|||||++++||..+... ...+.|.|+|||+|||||.|+|||+
T Consensus 81 ~~~lv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~ 160 (354)
T 3gbj_A 81 GENILQNAFDGYNACIFAYGQTGSGKSYTMMGTADQPGLIPRLCSGLFERTQKEENEEQSFKVEVSYMEIYNEKVRDLLD 160 (354)
T ss_dssp HHHHHHHHHTTCCEEEEEEECTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHHCBTTEEEEEEEEEEEEETTEEEETTC
T ss_pred hHHHHHHHhCCceeEEEeeCCCCCCCceEEecCCCCCchhhHHHHHHHHHHHhhcccccceeeeceeEEEecCeeeEccC
Confidence 479999999999999999999999999999999999999999999999988753 4568999999999999999999998
Q ss_pred CCCCCCceEEEecCCCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeecc----CCc
Q 037169 391 TSPTSKKLEIRQASEGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLI----NGE 466 (860)
Q Consensus 391 ~~~~~~~l~i~~~~~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~----~~~ 466 (860)
+....+.+.+++++.++++|.|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|.+.... ...
T Consensus 161 ~~~~~~~l~i~e~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~ 240 (354)
T 3gbj_A 161 PKGSRQTLKVREHSVLGPYVDGLSKLAVTSYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFKITLTHTLYDVKSGTSG 240 (354)
T ss_dssp ------CBCBC------CCBTTCCCEEECSHHHHHHHHHHHHHCC----------CTTSEEEEEEEEEEEEECTTSCEEE
T ss_pred CCCCCcceEEEEcCCCCEEEEeeEEEecCCHHHHHHHHHHHHhcCCeeecCCCCCCCcccEEEEEEEEEEecccCCCCCC
Confidence 7666678999999999999999999999999999999999999999999999999999999999999875322 122
Q ss_pred eeEeeEEEeecCCcccccccccchhchHHHhHhhhhHHHHHHHHHHhcc------CCCcccCCCCcchhhcccccCCCcc
Q 037169 467 CTKSKLWLVDLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISSLAT------KSGHIPYRNSKLTHLLQDSLGGDSK 540 (860)
Q Consensus 467 ~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~------~~~hVPYRdSKLT~LLqdsLgGnsk 540 (860)
...|+|+|||||||||..++++.|.|++|+.+||+||++||+||.||+. +..||||||||||+||||+|||||+
T Consensus 241 ~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~~~~hvPyRdSkLT~lLqdsLgGnsk 320 (354)
T 3gbj_A 241 EKVGKLSLVDLAGSERATKTGAAGDRLKEGSNINKSLTTLGLVISALADQSAGKNKNKFVPYRDSVLTWLLKDSLGGNSK 320 (354)
T ss_dssp EEEEEEEEEECCCCCCCCCCC------CHHHHHHHHHHHHHHHHHHHHHC------CCCCCGGGSHHHHHTHHHHSTTCE
T ss_pred eeEEEEEEEECCCCCchhhcCCccccchhHHHhhHHHHHHHHHHHHHHhhhcccCCCCcccccccHHHHHHHHHhCCCCe
Confidence 4579999999999999999999999999999999999999999999985 4579999999999999999999999
Q ss_pred eeEEEecCCCCCCHHhHHHHHHHHHHhhc
Q 037169 541 TLMFLQISPSEQDLGETLSSLNFASRVRG 569 (860)
Q Consensus 541 T~mI~~VSP~~~~~~ETl~TL~fA~r~r~ 569 (860)
|+||+||||+..+++||++||+||.+|+.
T Consensus 321 t~mIa~vsP~~~~~~ETlsTLr~a~~~~~ 349 (354)
T 3gbj_A 321 TAMVATVSPAADNYDETLSTLRYADRAKH 349 (354)
T ss_dssp EEEEEEECCBGGGHHHHHHHHHHHHHHC-
T ss_pred EEEEEEeCCCcchHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999985
No 21
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=100.00 E-value=2e-81 Score=699.76 Aligned_cols=312 Identities=40% Similarity=0.602 Sum_probs=255.3
Q ss_pred cCCCeEEEEEeCCCCchhhhCCCceEEEecC--------------------CCCCccceeEEEEecc-chhhHHHhhCCc
Q 037169 265 VLGNIRVFCRCRPLSKEEASAGHAMVVDFSA--------------------AKDGELGILTVDVFAD-ASPLVTSVLDGY 323 (860)
Q Consensus 265 ~~gnIrV~~RvRP~~~~E~~~~~~~~v~~~~--------------------~~~~~~~~~~~dVf~~-v~plV~~~l~G~ 323 (860)
..+||||||||||++..|...+...++.+.. +..+.....+.+||.. +.|+|+++++||
T Consensus 21 ~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~F~FD~vf~~~~~Q~~Vy~~~~~plv~~~l~G~ 100 (373)
T 2wbe_C 21 SNQNIQVYVRVRPLNSRERCIRSAEVVDVVGPREVVTRHTLDSKLTKKFTFDRSFGPESKQCDVYSVVVSPLIEEVLNGY 100 (373)
T ss_dssp CCEECEEEEEECCCCHHHHHHTCCBCEEEETTTEEEESSSSSSTTCEEEECSEEECTTCCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCeEEEEEcCCCChhhhccCCCceEEEcCCCeEEEecCCCCCCceEEeccEEeccccchhHHHHHHHHHHHHHHhCCc
Confidence 3489999999999999987655444444322 1112222233567766 789999999999
Q ss_pred cEEEEeeccCCCCccccccCCCC-----------CCCchhhHHHHHHHHHHHhcCCceEEEEEEEEEEeccccccccCCC
Q 037169 324 NVCIFAYGQTGTGKTFTMEGTQQ-----------NRGVNYRTLELLFKIAEERKETFTYSISVSALEVYNEQIRDLLDTS 392 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM~G~~~-----------~~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~ 392 (860)
|+||||||||||||||||+|++. ++|||||++++||+.+... .+.|.|+|||+|||||.|+|||++.
T Consensus 101 n~tifAYGqTGSGKTyTm~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~~~--~~~~~v~vS~~EIYnE~i~DLL~~~ 178 (373)
T 2wbe_C 101 NCTVFAYGQTGTGKTHTMVGNETAELKSSWEDDSDIGIIPRALSHLFDELRMM--EVEYTMRISYLELYNEELCDLLSTD 178 (373)
T ss_dssp CEEEEEECSTTSSHHHHHTBSCSCCSSSCSSCTTTBCHHHHHHHHHHHHHHHC--CSCEEEEEEEEEEETTEEEESSCTT
T ss_pred eEEEEeecCCCCCcceecccCccccccccccccCCCcChHHHHHHHHHHHHhc--CceEEEEEEEEEEeCCeEEECCCCC
Confidence 99999999999999999999764 6799999999999999764 4689999999999999999999864
Q ss_pred CCCCceEEEecC--CCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeecc-C--Cce
Q 037169 393 PTSKKLEIRQAS--EGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLI-N--GEC 467 (860)
Q Consensus 393 ~~~~~l~i~~~~--~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~-~--~~~ 467 (860)
+ ...+.+++++ .|+++|+|++++.|.|++|++.+|..|.++|++++|.||.+|||||+||+|.|...... . ...
T Consensus 179 ~-~~~l~i~~~~~~~g~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~ 257 (373)
T 2wbe_C 179 D-TTKIRIFDDSTKKGSVIIQGLEEIPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGIEGEDML 257 (373)
T ss_dssp S-CSCCCEEECSSSSSCEEETTCCCEEESSHHHHHHHHHHHHHHHTTTCSCHHHHHHHSEEEEEEEEEECTTCTTTCCEE
T ss_pred C-CCCceeEeccCCCCcEEecCceEEccCCHHHHHHHHHHHhhhhccccccCCCCCCCccEEEEEEEEEecCCCCCCcce
Confidence 3 3467788774 57899999999999999999999999999999999999999999999999999875422 1 234
Q ss_pred eEeeEEEeecCCcccccccccc-hhchHHHhHhhhhHHHHHHHHHHhccCCCcccCCCCcchhhcccccCCCcceeEEEe
Q 037169 468 TKSKLWLVDLAGSERLAKTEVQ-GERLKEAQNINRSLSALGDVISSLATKSGHIPYRNSKLTHLLQDSLGGDSKTLMFLQ 546 (860)
Q Consensus 468 ~~skL~lVDLAGSEr~~~t~~~-g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSKLT~LLqdsLgGnskT~mI~~ 546 (860)
..|+|+|||||||||..++++. |.|++|+.+||+||++||+||.||+.+..||||||||||+||||+||||++|+||+|
T Consensus 258 ~~skL~lVDLAGSEr~~~t~~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~ 337 (373)
T 2wbe_C 258 KIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVDRAPHVPYRESKLTRLLQESLGGRTKTSIIAT 337 (373)
T ss_dssp EEEEEEEEECCCC--------------------CHHHHHHHHHHHHHHHCSSCCCGGGCHHHHHTHHHHHSSSEEEEEEE
T ss_pred eEEEEEEEECCCCCccccccCccccchhHHHHHHHHHHHHHHHHHHHHcCCCcCccccchHHHHHHHHhCCCceEEEEEE
Confidence 5799999999999999999987 999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCHHhHHHHHHHHHHhhccccccccccc
Q 037169 547 ISPSEQDLGETLSSLNFASRVRGVELSPARKQI 579 (860)
Q Consensus 547 VSP~~~~~~ETl~TL~fA~r~r~I~~~p~~~~~ 579 (860)
|||+..+++||++||+||+|++.|++.|..+..
T Consensus 338 isP~~~~~~ETlsTLrfA~rak~I~n~p~vN~~ 370 (373)
T 2wbe_C 338 ISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQK 370 (373)
T ss_dssp ECCBGGGHHHHHHHHHHHHHHHTCEECCCCCEE
T ss_pred eCCCcccHHHHHHHHHHHHHHhhccccceeccc
Confidence 999999999999999999999999999987753
No 22
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=100.00 E-value=7.9e-80 Score=683.49 Aligned_cols=304 Identities=32% Similarity=0.439 Sum_probs=256.6
Q ss_pred CeEEEEEeCCCCchhhhCCCceEEEec--------------------------CCCCCccceeEEEEecc-chhhHHHhh
Q 037169 268 NIRVFCRCRPLSKEEASAGHAMVVDFS--------------------------AAKDGELGILTVDVFAD-ASPLVTSVL 320 (860)
Q Consensus 268 nIrV~~RvRP~~~~E~~~~~~~~v~~~--------------------------~~~~~~~~~~~~dVf~~-v~plV~~~l 320 (860)
||||||||||+++.|...+...++.+. ++..+.....+.+||.+ +.|+|++++
T Consensus 1 ~IrV~vRvRP~~~~E~~~~~~~~v~~~~~~~i~i~~~~~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~~plv~~~~ 80 (360)
T 1ry6_A 1 MIKVVVRKRPLSELEKKKKDSDIITVKNNCTLYIDEPRYKVDMTKYIERHEFIVDKVFDDTVDNFTVYENTIKPLIIDLY 80 (360)
T ss_dssp CEEEEEEECCCCHHHHHTTCCBCEEEEETTEEEEEEEEEETTTEEEEEEEEEECSEEECTTCCHHHHHHHHTHHHHHHHH
T ss_pred CeEEEEECCCCChHHhccCCceEEEECCCCEEEEeCCccccccccccccceEEeeeEecCCCCHHHHHHHHhhhhhhhhc
Confidence 799999999999999876654444332 11122222233456765 789999999
Q ss_pred C-CccEEEEeeccCCCCccccccCCC-----CCCCchhhHHHHHHHHHHHhcCCceEEEEEEEEEEeccccccccCCCCC
Q 037169 321 D-GYNVCIFAYGQTGTGKTFTMEGTQ-----QNRGVNYRTLELLFKIAEERKETFTYSISVSALEVYNEQIRDLLDTSPT 394 (860)
Q Consensus 321 ~-G~N~~IfaYGqTGSGKTyTM~G~~-----~~~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~ 394 (860)
+ ||||||||||||||||||||+|++ .++|||||++++||..+......+.|.|+|||+|||||.|+|||++.
T Consensus 81 ~~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~-- 158 (360)
T 1ry6_A 81 ENGCVCSCFAYGQTGSGKTYTMLGSQPYGQSDTPGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYCGKLYDLLQKR-- 158 (360)
T ss_dssp HHCCEEEEEEECCTTSSHHHHHHBSSSTTTSSCBCHHHHHHHHHHHHHHHHCSSSCEEEEEEEEEEETTEEEESCCC---
T ss_pred cCCceeEEEeeCCCCCCCCEEEecCCCCCCccCCCcHHHHHHHHHHHHHhhccCCceEEEEEEEEeeCCeeEEcccCC--
Confidence 6 999999999999999999999984 67999999999999999887777899999999999999999999753
Q ss_pred CCceEEEecCCCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccCCceeEeeEEE
Q 037169 395 SKKLEIRQASEGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLINGECTKSKLWL 474 (860)
Q Consensus 395 ~~~l~i~~~~~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~~~~~~skL~l 474 (860)
+.+.+++++.++++|.|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|...+ .....|+|+|
T Consensus 159 -~~~~~~e~~~~~~~v~gl~~~~V~s~~e~~~~l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~---~~~~~skL~l 234 (360)
T 1ry6_A 159 -KMVAALENGKKEVVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQNDESSRSHAILNIDLKDIN---KNTSLGKIAF 234 (360)
T ss_dssp -----------CCBCGGGSCCEEECSHHHHHHHHHHHHHHHHHCTTCCTTGGGGSEEEEEEEEEETT---TTEEEEEEEE
T ss_pred -ccceeeEcCCCCEEEcCcEEEEeCCHHHHHHHHHHHhhhhhcccccccCCCccceEEEEEEEEecc---CCcceeEEEE
Confidence 356788899999999999999999999999999999999999999999999999999999998643 3467899999
Q ss_pred eecCCcccccccccch-hchHHHhHhhhhHHHHHHHHHHhccCCCcccCCCCcchhhcccccCCCcceeEEEecCCCCCC
Q 037169 475 VDLAGSERLAKTEVQG-ERLKEAQNINRSLSALGDVISSLATKSGHIPYRNSKLTHLLQDSLGGDSKTLMFLQISPSEQD 553 (860)
Q Consensus 475 VDLAGSEr~~~t~~~g-~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP~~~~ 553 (860)
||||||||..++++.| .+++|+.+||+||++||+||.||+.+..||||||||||+||||+|||||+|+||+||||+..+
T Consensus 235 VDLAGSEr~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~ 314 (360)
T 1ry6_A 235 IDLAGSERGADTVSQNKQTQTDGANINRSLLALKECIRAMDSDKNHIPFRDSELTKVLRDIFVGKSKSIMIANISPTISC 314 (360)
T ss_dssp EECCCTTGGGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSCCGGGCHHHHHTGGGGSSSCEEEEEEEECCBGGG
T ss_pred EECCCCccccccccccccchHHHHHHHHHHHHHHHHHHHHhcCCCCCccccCHHHHHHHHHhCCCCeEEEEEEeCCCccc
Confidence 9999999999999876 578999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHhhccccccccc
Q 037169 554 LGETLSSLNFASRVRGVELSPARK 577 (860)
Q Consensus 554 ~~ETl~TL~fA~r~r~I~~~p~~~ 577 (860)
++||++||+||+|+++|++.|..+
T Consensus 315 ~~ETlsTLrfA~rak~i~n~~~~~ 338 (360)
T 1ry6_A 315 CEQTLNTLRYSSRVKNKGNSKLEG 338 (360)
T ss_dssp HHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHHHHhhcccCcccC
Confidence 999999999999999999977644
No 23
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=100.00 E-value=4.3e-80 Score=693.19 Aligned_cols=308 Identities=33% Similarity=0.456 Sum_probs=245.1
Q ss_pred hhhhccCCCeEEEEEeCCCCchhhhCCCceEEEecC--------------------------CCCCccceeEEEEecc-c
Q 037169 260 VSTIQVLGNIRVFCRCRPLSKEEASAGHAMVVDFSA--------------------------AKDGELGILTVDVFAD-A 312 (860)
Q Consensus 260 ~~~~~~~gnIrV~~RvRP~~~~E~~~~~~~~v~~~~--------------------------~~~~~~~~~~~dVf~~-v 312 (860)
+++..+.+||||||||||++..|...+...++.+.. +..+.....+.+||.. +
T Consensus 64 ~~~~~~~~~I~V~vRvRPl~~~E~~~~~~~~v~~~~~~~v~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~tQ~~Vy~~~~ 143 (410)
T 1v8k_A 64 VTDPIEEHRICVCVRKRPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTA 143 (410)
T ss_dssp TTCTTSCCCEEEEEEECCCCHHHHHTTCCBCEECCSSSEEEEEEEEECTTCCEEEEEEEEECSEEECTTCCHHHHHHHTT
T ss_pred cCCcCCCCCeEEEEEeCCCChhHhhcCCccEEEECCCCEEEEecCcccccccccccceEEeeeEEEecCCChhhhhHHHH
Confidence 344445799999999999999998766544443322 1112222223456665 6
Q ss_pred hhhHHHhhCCccEEEEeeccCCCCccccccCCC------CCCCchhhHHHHHHHHHHHh-cCCceEEEEEEEEEEecccc
Q 037169 313 SPLVTSVLDGYNVCIFAYGQTGTGKTFTMEGTQ------QNRGVNYRTLELLFKIAEER-KETFTYSISVSALEVYNEQI 385 (860)
Q Consensus 313 ~plV~~~l~G~N~~IfaYGqTGSGKTyTM~G~~------~~~GIipRal~~LF~~~~~~-~~~~~~~V~vS~lEIYnE~i 385 (860)
.|+|+++++|||+||||||||||||||||+|+. .++||+||++.+||..+... ...+.|.|+|||+|||||.|
T Consensus 144 ~plV~~~l~G~N~tifAYGQTGSGKTyTM~G~~~~~~~~~~~Giipra~~~lF~~~~~~~~~~~~~~V~vS~lEIYnE~i 223 (410)
T 1v8k_A 144 RPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKV 223 (410)
T ss_dssp HHHHHHHHTTCEEEEEEEESTTSSHHHHHHCBC----CBGGGSHHHHHHHHHHHHHTSHHHHTTCCEEEEEEEEEETTEE
T ss_pred HHHHHHHhcCCceeEEeecCCCCCCCeEeecCCCCCCccccCcchhhhHHHHHHHHhhhcccCccEEEEEEEEEeeCCEE
Confidence 899999999999999999999999999999963 46899999999999988643 24678999999999999999
Q ss_pred ccccCCCCCCCceEEEecCCCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccCC
Q 037169 386 RDLLDTSPTSKKLEIRQASEGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLING 465 (860)
Q Consensus 386 ~DLL~~~~~~~~l~i~~~~~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~~ 465 (860)
+|||++ ...+.+++++.++++|.|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|.|....
T Consensus 224 ~DLL~~---~~~l~i~ed~~~~v~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~---- 296 (410)
T 1v8k_A 224 FDLLNK---KAKLRVLEDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACFQILLRTKG---- 296 (410)
T ss_dssp EETTTT---TEEEEEEECSSCCEEEETCCCEEESSHHHHHHHHHHHHHTCC--------CCCSSEEEEEEEEESSS----
T ss_pred EECCCC---CCCceEEECCCCCeEecCCEEEEeCCHHHHHHHHHHHHhhCCcccccCCCCCCCceEEEEEEEEeCC----
Confidence 999984 3579999999999999999999999999999999999999999999999999999999999998652
Q ss_pred ceeEeeEEEeecCCcccccccc-cchhchHHHhHhhhhHHHHHHHHHHhccCCCcccCCCCcchhhcccc-cCCCcceeE
Q 037169 466 ECTKSKLWLVDLAGSERLAKTE-VQGERLKEAQNINRSLSALGDVISSLATKSGHIPYRNSKLTHLLQDS-LGGDSKTLM 543 (860)
Q Consensus 466 ~~~~skL~lVDLAGSEr~~~t~-~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSKLT~LLqds-LgGnskT~m 543 (860)
...|+|+|||||||||..+++ +.|.+++|+.+||+||++||+||.||+.+..||||||||||+||||| |||||+|+|
T Consensus 297 -~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hIPYRdSKLTrLLqdsllGgnskT~m 375 (410)
T 1v8k_A 297 -RLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCM 375 (410)
T ss_dssp -SEEEEEEEEECCCCCC------------TTHHHHHHHHHHHHHHHHHHTC------CCCCHHHHHTTHHHHSSSEEEEE
T ss_pred -cceeEEEEEECCCccccccccccccchhHHHHHHhHHHHHHHHHHHHHhcCCCCCCcccchhHHHHhhcccCCCceEEE
Confidence 367999999999999998876 46788899999999999999999999999999999999999999999 699999999
Q ss_pred EEecCCCCCCHHhHHHHHHHHHHhhccccccc
Q 037169 544 FLQISPSEQDLGETLSSLNFASRVRGVELSPA 575 (860)
Q Consensus 544 I~~VSP~~~~~~ETl~TL~fA~r~r~I~~~p~ 575 (860)
|+||||+..+++||++||+||+||+.|.-.|.
T Consensus 376 Ia~iSP~~~~~~ETlsTLrfA~rak~i~~~~~ 407 (410)
T 1v8k_A 376 IAMISPGISSCEYTLNTLRYADRVKELSHHHH 407 (410)
T ss_dssp EEEECCBGGGHHHHHHHHHHHHHHHTTC----
T ss_pred EEEeCCccccHHHHHHHHHHHHHhccCCCCCC
Confidence 99999999999999999999999999987663
No 24
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=100.00 E-value=6.9e-80 Score=687.59 Aligned_cols=307 Identities=33% Similarity=0.458 Sum_probs=243.0
Q ss_pred hhhhhccCCCeEEEEEeCCCCchhhhCCCceEEEec--------------------------CCCCCccceeEEEEecc-
Q 037169 259 MVSTIQVLGNIRVFCRCRPLSKEEASAGHAMVVDFS--------------------------AAKDGELGILTVDVFAD- 311 (860)
Q Consensus 259 ~~~~~~~~gnIrV~~RvRP~~~~E~~~~~~~~v~~~--------------------------~~~~~~~~~~~~dVf~~- 311 (860)
.+++..+.+||||||||||+++.|...+...++.+. ++..+.....+.+||..
T Consensus 43 ~~~~~~~~~~I~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~sQ~~Vy~~~ 122 (387)
T 2heh_A 43 TMTDPIEEHRICVCVRKRPLNKQELAKKEIDVISIPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFT 122 (387)
T ss_dssp CTTSCCCCCSEEEEEEECCCCHHHHHTTCCBCEECCBSSEEEEEEEEECTTCCEEEEEEEEECSEEECTTCCHHHHHHHT
T ss_pred ccCCCCCCCCeEEEEECCCCChHHhccCCceEEEECCCCEEEEeCCCccccccccccccEEeeeEEEecCCCceeehhhh
Confidence 344555679999999999999999876654444332 11122222223456765
Q ss_pred chhhHHHhhCCccEEEEeeccCCCCccccccCCC------CCCCchhhHHHHHHHHHHHh-cCCceEEEEEEEEEEeccc
Q 037169 312 ASPLVTSVLDGYNVCIFAYGQTGTGKTFTMEGTQ------QNRGVNYRTLELLFKIAEER-KETFTYSISVSALEVYNEQ 384 (860)
Q Consensus 312 v~plV~~~l~G~N~~IfaYGqTGSGKTyTM~G~~------~~~GIipRal~~LF~~~~~~-~~~~~~~V~vS~lEIYnE~ 384 (860)
+.|+|+++++|||+||||||||||||||||+|+. .++||+||++++||..+... ...+.|.|+|||+|||||.
T Consensus 123 ~~plv~~~l~G~N~tifAYGQTGSGKTyTM~G~~~~~~~~~~~Giipr~~~~lF~~~~~~~~~~~~~~V~vS~~EIYnE~ 202 (387)
T 2heh_A 123 ARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKAQNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGK 202 (387)
T ss_dssp THHHHHHHHTTCEEEEEEESCTTSSHHHHHC-----------CCHHHHHHHHHHHHHTSHHHHTTTCEEEEEEEEEETTE
T ss_pred HHHHHHHHhcCCceEEEEecCCCCCCCeEeccCCCCCCcccCCceehhhHHHHHHHhhcccccCceEEEEEEEEEecCCe
Confidence 6899999999999999999999999999999963 56899999999999988653 2457899999999999999
Q ss_pred cccccCCCCCCCceEEEecCCCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccC
Q 037169 385 IRDLLDTSPTSKKLEIRQASEGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLIN 464 (860)
Q Consensus 385 i~DLL~~~~~~~~l~i~~~~~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~ 464 (860)
|+|||++ ...+.+++++.++++|.|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|.|...
T Consensus 203 v~DLL~~---~~~l~i~ed~~~~v~v~gl~~~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~---- 275 (387)
T 2heh_A 203 LFDLLNK---KAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAK---- 275 (387)
T ss_dssp EEETTTT---TEECEEEECTTCCEEEETCCCEEESSHHHHHHHHHHHHHHC---------CGGGSEEEEEEEEESS----
T ss_pred EEECCCC---CccceEEEcCCCCEEecCCEEEEeCCHHHHHHHHHHHHhhCCcccCcCcCCcccceEEEEEEEEEC----
Confidence 9999984 357999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CceeEeeEEEeecCCcccccccc-cchhchHHHhHhhhhHHHHHHHHHHhccCCCcccCCCCcchhhcccc-cCCCccee
Q 037169 465 GECTKSKLWLVDLAGSERLAKTE-VQGERLKEAQNINRSLSALGDVISSLATKSGHIPYRNSKLTHLLQDS-LGGDSKTL 542 (860)
Q Consensus 465 ~~~~~skL~lVDLAGSEr~~~t~-~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSKLT~LLqds-LgGnskT~ 542 (860)
....|+|+|||||||||..+++ +.|.+++|+.+||+||++||+||.||+.+..||||||||||+||||+ |||||+|+
T Consensus 276 -~~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~aL~~~~~hvPYRdSKLTrlLqdsllGgnskT~ 354 (387)
T 2heh_A 276 -GRMHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTC 354 (387)
T ss_dssp -SSEEEEEEEEECCCCC---------------CHHHHHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGGGSSTTEEEE
T ss_pred -CeeeeEEEEEECCCCccccccccccccchhhHHHHhHHHHHHHHHHHHHhcCCCCCCccccHHHHHHhhhccCCCCeEE
Confidence 2467999999999999998876 46788899999999999999999999999999999999999999999 59999999
Q ss_pred EEEecCCCCCCHHhHHHHHHHHHHhhccccc
Q 037169 543 MFLQISPSEQDLGETLSSLNFASRVRGVELS 573 (860)
Q Consensus 543 mI~~VSP~~~~~~ETl~TL~fA~r~r~I~~~ 573 (860)
||+||||+..+++||++||+||+||++|++.
T Consensus 355 mIa~isP~~~~~~ETlsTLrfA~rak~I~~~ 385 (387)
T 2heh_A 355 MIATISPGISSCEYTLNTLRYADRVKELSPH 385 (387)
T ss_dssp EEEEECCBGGGHHHHHHHHHHHHHHCC----
T ss_pred EEEEeCCccchHHHHHHHHHHHHHhccCcCC
Confidence 9999999999999999999999999999764
No 25
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.6e-80 Score=683.91 Aligned_cols=304 Identities=38% Similarity=0.584 Sum_probs=239.2
Q ss_pred ccCCCeEEEEEeCCCCchhhhC----CCceEEE--------------------ecCCCCCccceeEEEEecc-chhhHHH
Q 037169 264 QVLGNIRVFCRCRPLSKEEASA----GHAMVVD--------------------FSAAKDGELGILTVDVFAD-ASPLVTS 318 (860)
Q Consensus 264 ~~~gnIrV~~RvRP~~~~E~~~----~~~~~v~--------------------~~~~~~~~~~~~~~dVf~~-v~plV~~ 318 (860)
...|||||||||||++..|... .....+. |.++..++ ...+.+||.+ +.|+|++
T Consensus 21 ~~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~F~FD~Vf~-~~sQ~~Vy~~~~~plv~~ 99 (359)
T 3nwn_A 21 GTRKKVHAFVRVKPTDDFAHEMIRYGDDKRSIDIHLKKDIRRGVVNNQQTDWSFKLDGVLH-DASQDLVYETVAKDVVSQ 99 (359)
T ss_dssp ---CCEEEEEEECCCSSCCTTTEEECTTSSEEEEECCCCSSHHHHTTSCCEEEEECSEEEE-SCCHHHHHHHHTHHHHHH
T ss_pred CCCCCEEEEEEcCCCCcccccceeecCCCcEEEEecCCccccccccCCcCceEeecCccCC-CCCHHHHHHHHHHHHHHH
Confidence 3459999999999998766431 1111121 22222221 1223457766 5899999
Q ss_pred hhCCccEEEEeeccCCCCccccccCCCC---CCCchhhHHHHHHHHHHHhcCCceEEEEEEEEEEeccccccccCCCC--
Q 037169 319 VLDGYNVCIFAYGQTGTGKTFTMEGTQQ---NRGVNYRTLELLFKIAEERKETFTYSISVSALEVYNEQIRDLLDTSP-- 393 (860)
Q Consensus 319 ~l~G~N~~IfaYGqTGSGKTyTM~G~~~---~~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~-- 393 (860)
+|+|||+||||||||||||||||+|++. ++|||||++++||+.+... ..+.|.|+|||+|||||.|+|||++.+
T Consensus 100 ~l~G~N~tifAYGQTGSGKTyTM~G~~~~~~~~Giipra~~~lF~~~~~~-~~~~~~v~vS~~EIYnE~i~DLL~~~~~~ 178 (359)
T 3nwn_A 100 ALDGYNGTIMCYGQTGAGKTYTMMGATENYKHRGILPRALQQVFRMIEER-PTHAITVRVSYLEIYNESLFDLLSTLPYV 178 (359)
T ss_dssp HHTTCCEEEEEEESTTSSHHHHHTBCSSCGGGBCHHHHHHHHHHHHHHTC-TTSCEEEEEEEEEEETTEEEETTSSSTTS
T ss_pred HhCCCCEEEEEeCCCCCCccEEeCCccCCccchhhHHHHHHHHHHHhhcC-CCCcEEEEEEEEEEecccccccccccccc
Confidence 9999999999999999999999999764 4899999999999988764 457899999999999999999998643
Q ss_pred --CCCceEEEecCCCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeecc--CCceeE
Q 037169 394 --TSKKLEIRQASEGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLI--NGECTK 469 (860)
Q Consensus 394 --~~~~l~i~~~~~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~--~~~~~~ 469 (860)
....+.+++++.| ++|+|++++.|.+++|++.+|..|..+|++++|.||..|||||+||+|+|...... .+....
T Consensus 179 ~~~~~~~~~~~~~~g-~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~~~~~~~~ 257 (359)
T 3nwn_A 179 GPSVTPMTIVENPQG-VFIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRTLSEEKYIT 257 (359)
T ss_dssp CTTTSCCEEEEETTE-EEEETCCCEECSSHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC-------CCEE
T ss_pred ccccccceEEecCCc-eEEeccEEEEecCHHHHHHHHHhhhhhcccccccCccccCcceEEEEEEEEeecccccCccccc
Confidence 2455778887754 88999999999999999999999999999999999999999999999999775432 344568
Q ss_pred eeEEEeecCCcccccccccchhchHHHhHhhhhHHHHHHHHHHhcc-CCCcccCCCCcchhhcccccCCCcceeEEEecC
Q 037169 470 SKLWLVDLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISSLAT-KSGHIPYRNSKLTHLLQDSLGGDSKTLMFLQIS 548 (860)
Q Consensus 470 skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~-~~~hVPYRdSKLT~LLqdsLgGnskT~mI~~VS 548 (860)
|+|+|||||||||..++++.|.|++|+.+||+||++||+||.||++ +..||||||||||+||||+|||||+|+||+|||
T Consensus 258 skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~~Lg~vI~aL~~~~~~hVPYRdSkLT~lLqdsLgGnskt~mI~~is 337 (359)
T 3nwn_A 258 SKINLVDLAGSERLGKSGSEGQVLKEATYINKSLSFLEQAIIALGDQKRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIY 337 (359)
T ss_dssp EEEEEEECCCCC----------------CCSTHHHHHHHHHHHHHC-----CCGGGSHHHHHTHHHHSSSSEEEEEEEEC
T ss_pred ccceeeeccccccccccCCchhHHHhhhhhcccHHHHHHHHHHHHhcCCCcCCcccCHHHHHHHHhcCCCccEEEEEEeC
Confidence 9999999999999999999999999999999999999999999986 457999999999999999999999999999999
Q ss_pred CCCCCHHhHHHHHHHHHHhhcc
Q 037169 549 PSEQDLGETLSSLNFASRVRGV 570 (860)
Q Consensus 549 P~~~~~~ETl~TL~fA~r~r~I 570 (860)
|+..+++||++||+||+|||.|
T Consensus 338 P~~~~~~ETlsTL~fA~rak~I 359 (359)
T 3nwn_A 338 GEAAQLEETLSSLRFASRMKLV 359 (359)
T ss_dssp CSGGGHHHHHHHHHHHTTGGGC
T ss_pred CchhhHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999986
No 26
>2nr8_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural genomics consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} PDB: 3nwn_A*
Probab=100.00 E-value=2.7e-79 Score=678.73 Aligned_cols=302 Identities=38% Similarity=0.572 Sum_probs=239.5
Q ss_pred CCCeEEEEEeCCCCchhhh------CCCceEEE------------------ecCCCCCccceeEEEEecc-chhhHHHhh
Q 037169 266 LGNIRVFCRCRPLSKEEAS------AGHAMVVD------------------FSAAKDGELGILTVDVFAD-ASPLVTSVL 320 (860)
Q Consensus 266 ~gnIrV~~RvRP~~~~E~~------~~~~~~v~------------------~~~~~~~~~~~~~~dVf~~-v~plV~~~l 320 (860)
.|||||||||||+...+.. .+....+. |.++..+. ...+.+||.. +.|+|++++
T Consensus 22 ~g~IrV~vRvRP~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~F~fD~Vf~-~~sQ~~Vy~~~~~~lv~~~l 100 (358)
T 2nr8_A 22 RKKVHAFVRVKPTDDFAHEMIRYGDDKRSIDIHLKKDIRRGVVNNQQTDWSFKLDGVLH-DASQDLVYETVAKDVVSQAL 100 (358)
T ss_dssp -CCEEEEEEECCCSSCCTTTEEECTTSSEEEEECCCCSSHHHHTTSCCEEEEECSEEEE-SCCHHHHHHHHTHHHHHHHH
T ss_pred CCCeEEEEEcCCCCCCccceeEECCCCCEEEEecCCccccccccCCCcceEEECCeecC-CcCHHHHHHHHHHHHHHHHh
Confidence 4999999999999764321 11111111 11111111 1122446666 589999999
Q ss_pred CCccEEEEeeccCCCCccccccCCCCC---CCchhhHHHHHHHHHHHhcCCceEEEEEEEEEEeccccccccCCCC----
Q 037169 321 DGYNVCIFAYGQTGTGKTFTMEGTQQN---RGVNYRTLELLFKIAEERKETFTYSISVSALEVYNEQIRDLLDTSP---- 393 (860)
Q Consensus 321 ~G~N~~IfaYGqTGSGKTyTM~G~~~~---~GIipRal~~LF~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~---- 393 (860)
+|||+||||||||||||||||+|++++ +|||||++++||+.++... .+.|.|+|||+|||||.|+|||++.+
T Consensus 101 ~G~N~tIfAYGqTGSGKTyTM~G~~~~~~~~Giipra~~~lF~~i~~~~-~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~ 179 (358)
T 2nr8_A 101 DGYNGTIMCYGQTGAGKTYTMMGATENYKHRGILPRALQQVFRMIEERP-THAITVRVSYLEIYNESLFDLLSTLPYVGP 179 (358)
T ss_dssp TTCCEEEEEEESTTSSHHHHHTBCSSCGGGBCHHHHHHHHHHHHHHTCT-TSCEEEEEEEEEEETTEEEETTSSSTTSCT
T ss_pred CCCceEEEEECCCCCCCceEecccccccccCCcHHHHHHHHHHHHhhcC-CceEEEEEEEEEEeCCeeeECcCCccccCc
Confidence 999999999999999999999998764 8999999999999998654 56899999999999999999998643
Q ss_pred CCCceEEEecCCCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeec--cCCceeEee
Q 037169 394 TSKKLEIRQASEGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNL--INGECTKSK 471 (860)
Q Consensus 394 ~~~~l~i~~~~~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~--~~~~~~~sk 471 (860)
....+.+++++ .+++|+|++++.|.+++|++.+|..|.++|++++|.||..|||||+||+|+|.+... ..+....|+
T Consensus 180 ~~~~l~i~e~~-~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~sk 258 (358)
T 2nr8_A 180 SVTPMTIVENP-QGVFIKGLSVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRTLSEEKYITSK 258 (358)
T ss_dssp TTSCCEEEEET-TEEEEETCCCEECSSHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC-------CCEEEE
T ss_pred cCCceEEEECC-CceEecCCEEEEcCCHHHHHHHHHHHHhccccccccCCCCCCcCeEEEEEEEEEEeccCCCCCEEEEE
Confidence 34678999998 568999999999999999999999999999999999999999999999999987653 233456899
Q ss_pred EEEeecCCcccccccccchhchHHHhHhhhhHHHHHHHHHHhccC-CCcccCCCCcchhhcccccCCCcceeEEEecCCC
Q 037169 472 LWLVDLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISSLATK-SGHIPYRNSKLTHLLQDSLGGDSKTLMFLQISPS 550 (860)
Q Consensus 472 L~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~-~~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP~ 550 (860)
|+|||||||||..++++.|.|++|+.+||+||++||+||.||+++ ..||||||||||+||||+|||||+|+||+||||+
T Consensus 259 L~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hiPyRdSkLT~LLqdsLgGnskt~mIa~isP~ 338 (358)
T 2nr8_A 259 INLVDLAGSERLGKSGSEGQVLKEATYINKSLSFLEQAIIALGDQKRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGE 338 (358)
T ss_dssp EEEEECCCCC----------------CCSTHHHHHHHHHHHHHC-----CCGGGSHHHHHTHHHHSSSSEEEEEEEECCS
T ss_pred EEEEECCCCCcccccCCchhhHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCccCHHHHHHHHhcCCCCeEEEEEEeCCc
Confidence 999999999999999999999999999999999999999999874 5799999999999999999999999999999999
Q ss_pred CCCHHhHHHHHHHHHHhhcc
Q 037169 551 EQDLGETLSSLNFASRVRGV 570 (860)
Q Consensus 551 ~~~~~ETl~TL~fA~r~r~I 570 (860)
..+++||++||+||+|+|.|
T Consensus 339 ~~~~~ETlsTLrfA~Rak~I 358 (358)
T 2nr8_A 339 AAQLEETLSSLRFASRMKLV 358 (358)
T ss_dssp GGGHHHHHHHHHHHTTGGGC
T ss_pred hhhHHHHHHHHHHHHHhccC
Confidence 99999999999999999976
No 27
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=100.00 E-value=1.6e-77 Score=661.33 Aligned_cols=297 Identities=33% Similarity=0.471 Sum_probs=231.0
Q ss_pred ccCCCeEEEEEeCCCCchhhhCCCceEEEecC----------------CCCCccceeEEEEecc-chhhHHHhhCCccEE
Q 037169 264 QVLGNIRVFCRCRPLSKEEASAGHAMVVDFSA----------------AKDGELGILTVDVFAD-ASPLVTSVLDGYNVC 326 (860)
Q Consensus 264 ~~~gnIrV~~RvRP~~~~E~~~~~~~~v~~~~----------------~~~~~~~~~~~dVf~~-v~plV~~~l~G~N~~ 326 (860)
...++|||+|||||+.+.|.. +...++.+.. +..+.....+.+||.+ +.|+|+++++|||+|
T Consensus 19 ~~~~~VrV~vRvRP~~~~e~~-~~~~~v~~~~~~~~~~~~~~~~~F~FD~Vf~~~~sQ~~Vy~~~~~plv~~~l~G~N~t 97 (344)
T 3dc4_A 19 AKLSAVRIAVREAPYRQFLGR-REPSVVQFPPWSDGKSLIVDQNEFHFDHAFPATISQDEMYQALILPLVDKLLEGFQCT 97 (344)
T ss_dssp CCCSEEEEEEEECCCC--------CCSEECCSSSCSSEEEETTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHHTCCEE
T ss_pred CCCCCeEEEEECCCCCccccc-CCceEEEecCCCCCceEEecCcEEEcceEECCCCCHHHHHHhhccchhhHhhCCCceE
Confidence 456999999999999887643 2333344332 2223333344567777 789999999999999
Q ss_pred EEeeccCCCCccccccCCC------CCCCchhhHHHHHHHHHHHhcC--CceEEEEEEEEEEeccccccccCCCCCCCce
Q 037169 327 IFAYGQTGTGKTFTMEGTQ------QNRGVNYRTLELLFKIAEERKE--TFTYSISVSALEVYNEQIRDLLDTSPTSKKL 398 (860)
Q Consensus 327 IfaYGqTGSGKTyTM~G~~------~~~GIipRal~~LF~~~~~~~~--~~~~~V~vS~lEIYnE~i~DLL~~~~~~~~l 398 (860)
|||||||||||||||+|++ +++|||||++++||+.+..... .+.|.|+|||+|||||+|+|||++.+..+.+
T Consensus 98 ifAYGQTGSGKTyTM~g~~~~~~~~~~~GIipra~~~LF~~i~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~ 177 (344)
T 3dc4_A 98 ALAYGQTGTGKSYSMGMTPPGEILPEHLGILPRALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLGSTPHMPMV 177 (344)
T ss_dssp EEEESSTTSSHHHHHTCSCGGGSCGGGCCHHHHHHHHHHHHHHHSSSSCSSCCEEEEEEEEEESSCEEETTSSCTTSBCC
T ss_pred EEEecCCCCCCCeEEcCCCCCCCCcccCCcHHHHHHHHHHHHHhhhhccccceEEEEEEEEEeCCeeEEccCCCCCCccc
Confidence 9999999999999999874 5689999999999999987543 3579999999999999999999865432211
Q ss_pred EEEecCCCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccCCceeEeeEEEeecC
Q 037169 399 EIRQASEGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLINGECTKSKLWLVDLA 478 (860)
Q Consensus 399 ~i~~~~~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~~~~~~skL~lVDLA 478 (860)
...+.|++++.|.|++|++.+|..|.++|++++|.||..|||||+||+|+|... ...|+|+|||||
T Consensus 178 --------~~~~~~~~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~Ifti~v~~~------~~~skl~lVDLA 243 (344)
T 3dc4_A 178 --------AARCQRCTCLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSK------THHSRMNIVDLA 243 (344)
T ss_dssp --------SSTTTCSCCEECSSHHHHHHHHHHHHHTCC----------CCEEEEEEEEEECS------SCEEEEEEEECC
T ss_pred --------cccccCceecccCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEec------CcEEEEEEEECC
Confidence 223568999999999999999999999999999999999999999999999753 357999999999
Q ss_pred CcccccccccchhchHHHhHhhhhHHHHHHHHHHhccCCCcccCCCCcchhhcccccCCCcceeEEEecCCCCCCHHhHH
Q 037169 479 GSERLAKTEVQGERLKEAQNINRSLSALGDVISSLATKSGHIPYRNSKLTHLLQDSLGGDSKTLMFLQISPSEQDLGETL 558 (860)
Q Consensus 479 GSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP~~~~~~ETl 558 (860)
||||..++++.|.+++|+.+||+||++||+||.+|+.++.||||||||||+||||+||||++|+||+||||+..+++||+
T Consensus 244 GSEr~~~t~~~g~r~~E~~~INkSL~aLg~vI~aL~~~~~hiPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl 323 (344)
T 3dc4_A 244 GSEGVRRTGHEGVARQEGVNINLGLLSINKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETL 323 (344)
T ss_dssp CCCCC-------------CCSCCHHHHHHHHHHHHHTTCSSCCGGGSHHHHHTTTTSSTTCEEEEEEEECCCGGGHHHHH
T ss_pred CCccccccccccchhHHHHHHhHhHHHHHHHHHHHhccCCcCCccccHHHHHHHHHhCCCCEEEEEEEeCCchhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccccc
Q 037169 559 SSLNFASRVRGVELSPA 575 (860)
Q Consensus 559 ~TL~fA~r~r~I~~~p~ 575 (860)
+||+||+||+.....|+
T Consensus 324 sTL~fA~ra~~~~~~~~ 340 (344)
T 3dc4_A 324 STLRFGTSAKAAALEHH 340 (344)
T ss_dssp HHHHHHHHHHHHTTTC-
T ss_pred HHHHHHHHHhhcCCCCC
Confidence 99999999998876654
No 28
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=100.00 E-value=1e-73 Score=689.11 Aligned_cols=305 Identities=43% Similarity=0.650 Sum_probs=242.4
Q ss_pred CCCeEEEEEeC----CCCchhhhCCCc-eEE---------------------------EecCCCCCccceeEEEEeccch
Q 037169 266 LGNIRVFCRCR----PLSKEEASAGHA-MVV---------------------------DFSAAKDGELGILTVDVFADAS 313 (860)
Q Consensus 266 ~gnIrV~~RvR----P~~~~E~~~~~~-~~v---------------------------~~~~~~~~~~~~~~~dVf~~v~ 313 (860)
++++||||||| |.+..|.+.|.. ..+ .|.++..+.....+.+||..+.
T Consensus 373 l~~~rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fd~vf~~~~~q~~v~~~~~ 452 (715)
T 4h1g_A 373 KGNIRVFCRIRNVSSSSSSSSSSSSEDIIQYEAPQDINDESKQELVITRNINNNFSNLRFLFDKIFEREQSNDLVFEELS 452 (715)
T ss_dssp SCSEEEEEEECCCC-------------BCEEECCC-------CEEEEEEEETTEEEEEEEECSEEECSSCCHHHHGGGTH
T ss_pred HhcCeEEEEEeccccccccccccccccceeccCCCCCCCCCCCeEEEcCCCCCCCCCeEEEeceEeCCCCCHHHHHHHHH
Confidence 59999999999 444433332211 111 1333333334444567888899
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccccCCCCCCCchhhHHHHHHHHHHHh-cCCceEEEEEEEEEEeccccccccCCC
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTMEGTQQNRGVNYRTLELLFKIAEER-KETFTYSISVSALEVYNEQIRDLLDTS 392 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM~G~~~~~GIipRal~~LF~~~~~~-~~~~~~~V~vS~lEIYnE~i~DLL~~~ 392 (860)
|+|+++++|||+||||||||||||||||+|+ ++|||||++++||+.+... ...+.|.|+|||+|||||.|+|||++.
T Consensus 453 ~~v~~~~~G~n~~i~ayGqtgsGKT~Tm~g~--~~Giipr~~~~lf~~~~~~~~~~~~~~v~~s~~Eiyne~i~DLl~~~ 530 (715)
T 4h1g_A 453 QLIQCSLDGTNVCVFAYGQTGSGKTFTMSHP--TNGMIPLSLKKIFNDIEELKEKGWSYTVRGKFIEIYNEAIVDLLNPK 530 (715)
T ss_dssp HHHHHHHTTCCEEEEEESSTTSSHHHHHHCT--TTSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEESSSCC
T ss_pred HHHHHHhCCceEEEEccCCCCCchhhccCCC--CCCcHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEECCEEEECCCCC
Confidence 9999999999999999999999999999995 5799999999999998864 446799999999999999999999864
Q ss_pred CC-CCceEEEec-CCCceEecCeeEEEeCChHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccCCceeEe
Q 037169 393 PT-SKKLEIRQA-SEGFHHVPGLTEAKIENIKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLINGECTKS 470 (860)
Q Consensus 393 ~~-~~~l~i~~~-~~g~~~v~gl~e~~V~s~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~~~~~~s 470 (860)
.. ...+.++++ ..|.++|.|++++.|.|++|++.+|..|.++|++++|.+|.+|||||+||+|+|.+.+...+....|
T Consensus 531 ~~~~~~~~~~~~~~~g~~~v~~l~~~~v~~~~~~~~~~~~g~~~r~~~~t~~n~~ssRSH~i~~i~~~~~~~~~~~~~~~ 610 (715)
T 4h1g_A 531 IDPNTKYEIKHDDIAGKTTVTNVSTIDIKSPEQAITILNQANKKRSTAATKSNDHSSRSHSIFIIDLQGYNSLTKESSYG 610 (715)
T ss_dssp CCTTCCCCEEEETTTTEEEETTCCCEECSCHHHHHHHHHHHHCC----------CGGGSEEEEEEEEEEEETTTCCEEEE
T ss_pred CCCCCcceeEEecCCCCEEEeCCEEEEcCCHHHHHHHHHHHHhccCcccccccCccccccEEEEEEEEEEecCCCCEeEE
Confidence 32 445666654 4577999999999999999999999999999999999999999999999999999998888888899
Q ss_pred eEEEeecCCcccccccccchhchHHHhHhhhhHHHHHHHHHHhcc-CCCcccCCCCcchhhcccccCCCcceeEEEecCC
Q 037169 471 KLWLVDLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISSLAT-KSGHIPYRNSKLTHLLQDSLGGDSKTLMFLQISP 549 (860)
Q Consensus 471 kL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~-~~~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP 549 (860)
+|+|||||||||..++++.|.|++|+.+||+||++||+||.+|+. +..|||||||||||||||||||||+|+||+||||
T Consensus 611 ~l~lvDLAGsEr~~~~~~~g~~~~E~~~IN~sL~~L~~vi~al~~~~~~~vpyR~SkLT~lL~~slggn~~t~~i~~isp 690 (715)
T 4h1g_A 611 TLNLIDLAGSERLNNSRAEGDRLKETQAINKSLSCLGDVIHSLNLKDGSHVPYRNSKLTYLLKHSLGGNSKTLMFVNISP 690 (715)
T ss_dssp EEEEEECCCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHCSCCCCCGGGCHHHHHTGGGTSTTCEEEEEEEECC
T ss_pred EEEEEeCCCcccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCCccCHHHHHHHhhcCCCceEEEEEEECC
Confidence 999999999999999999999999999999999999999999985 4589999999999999999999999999999999
Q ss_pred CCCCHHhHHHHHHHHHHhhcccc
Q 037169 550 SEQDLGETLSSLNFASRVRGVEL 572 (860)
Q Consensus 550 ~~~~~~ETl~TL~fA~r~r~I~~ 572 (860)
+..+++||++||+||+|+|+|++
T Consensus 691 ~~~~~~et~~tL~fa~r~~~i~~ 713 (715)
T 4h1g_A 691 LTKDLNETINSLRFATKVNNTRI 713 (715)
T ss_dssp BGGGHHHHHHHHHHHHHHCC---
T ss_pred ChhhHHHHHHHHHHHHHhcccee
Confidence 99999999999999999999963
No 29
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.94 E-value=7.1e-28 Score=219.59 Aligned_cols=85 Identities=45% Similarity=0.621 Sum_probs=80.2
Q ss_pred HhHhhhhHHHHHHHHHHhccC-CCcccCCCCcchhhcccccCCCcceeEEEecCCCCCCHHhHHHHHHHHHHhhcccccc
Q 037169 496 AQNINRSLSALGDVISSLATK-SGHIPYRNSKLTHLLQDSLGGDSKTLMFLQISPSEQDLGETLSSLNFASRVRGVELSP 574 (860)
Q Consensus 496 ~~~INkSL~aLg~vI~aL~~~-~~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP~~~~~~ETl~TL~fA~r~r~I~~~p 574 (860)
+.+||+||++||+||.+|+.+ ..||||||||||+||+|+||||++|+||+||||+..+++||++||+||+|++.|++.|
T Consensus 1 a~~IN~SL~~Lg~vI~aL~~~~~~hvPyRdSkLT~lL~dsLgGnskt~mi~~vsp~~~~~~ETl~TL~fA~rak~i~~~~ 80 (100)
T 2kin_B 1 AKNINKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLDGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTV 80 (100)
T ss_dssp CCBSSHHHHHHHHHHHHHHHTCCSSCCGGGCHHHHHTHHHHHSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCcchHHHHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHhcCCCceeEEEEeCcccchHHHHHHHHHHHHHHHhccCcc
Confidence 357999999999999999986 6899999999999999999999999999999999999999999999999999999999
Q ss_pred cccccC
Q 037169 575 ARKQID 580 (860)
Q Consensus 575 ~~~~~~ 580 (860)
..+...
T Consensus 81 ~~n~~~ 86 (100)
T 2kin_B 81 SVNLEL 86 (100)
T ss_dssp CCEEEC
T ss_pred eeccCC
Confidence 877543
No 30
>2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=9.8e-28 Score=252.71 Aligned_cols=263 Identities=13% Similarity=0.143 Sum_probs=172.8
Q ss_pred hhHHhhhhhccC-CCeEEEEEeCCCC-chh--hhCCCceEE------EecCCCCCccceeEE--EEeccchhhHHHhhC-
Q 037169 255 QLNKMVSTIQVL-GNIRVFCRCRPLS-KEE--ASAGHAMVV------DFSAAKDGELGILTV--DVFADASPLVTSVLD- 321 (860)
Q Consensus 255 ~~~~~~~~~~~~-gnIrV~~RvRP~~-~~E--~~~~~~~~v------~~~~~~~~~~~~~~~--dVf~~v~plV~~~l~- 321 (860)
..|+|+|+|+++ |||||||||||.. +.. ..-....+. .|.+++.+.....+. +||.++.++|+++|+
T Consensus 11 ~RRkL~NsI~ELKGnIRVFcrvrp~~~p~~~~v~y~~~~I~v~~~~k~f~FDRVf~p~s~Qe~~~vf~E~~~~i~scLd~ 90 (298)
T 2o0a_A 11 RSRRLENSIIEQKGTMRCYAYVMEQNLPENLLFDYENGVITQGLSEHVYKFNRVIPHLKVSEDKFFTQEYSVYHDMCLNQ 90 (298)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECGGGSCTTEEEETTTTEEEETTTCCEEECSEEEETTTSCHHHHHHHTTHHHHHHHHHT
T ss_pred HHHHHHhHHHHhhCceEEEEEeccccCCccceeecCccceeecCCCceEEeeeEECccccccHHHHHHHHHHHHHHHHhC
Confidence 347888998887 9999999999965 322 111111111 233333333444445 799999999999999
Q ss_pred CccEEEEeeccCCCCccccccCCCCCCCchhhHHHHHHHHHHH-hcCCceEEEEEEEEEEe-ccccccccCCCCCCCceE
Q 037169 322 GYNVCIFAYGQTGTGKTFTMEGTQQNRGVNYRTLELLFKIAEE-RKETFTYSISVSALEVY-NEQIRDLLDTSPTSKKLE 399 (860)
Q Consensus 322 G~N~~IfaYGqTGSGKTyTM~G~~~~~GIipRal~~LF~~~~~-~~~~~~~~V~vS~lEIY-nE~i~DLL~~~~~~~~l~ 399 (860)
|||+||||||||||||| ||++..+|..... .. |.|.+++||+||| ||.++|||..++.+..++
T Consensus 91 GyNvcIfSyGQTGsGKT-------------~ral~q~f~~~~~~~~--~~Y~~tlq~veLy~Ne~~~DLL~~~~~~~k~e 155 (298)
T 2o0a_A 91 KKNFNLISLSTTPHGSL-------------RESLIKFLAEKDTIYQ--KQYVITLQFVFLSDDEFSQDMLLDYSHNDKDS 155 (298)
T ss_dssp TCCEEEEEECSSCCHHH-------------HHHHHHHHHSTTSHHH--HHEEEEEEEEEEECC-CEEETTSCCC------
T ss_pred CCceEEEEECCCCCCcc-------------HHHHHHHHHHhhhhcc--cceEEEEEEEEEecCCchHHhcCCCCCCCcce
Confidence 99999999999999999 9999999997754 33 8999999999999 999999998656555889
Q ss_pred EEecCCCceEecCeeEEEeCC-hHHHHHHHhhhhhcCccccCCCCCCCCCceEEEEEEEEEeeccC--C-ceeEeeEEEe
Q 037169 400 IRQASEGFHHVPGLTEAKIEN-IKEVWDVLHIGSNARAVGSNNVNEHSSRSHCMLCISVKAKNLIN--G-ECTKSKLWLV 475 (860)
Q Consensus 400 i~~~~~g~~~v~gl~e~~V~s-~~e~~~ll~~g~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~~--~-~~~~skL~lV 475 (860)
|+.+.+|.+.|.|++.+.|.+ ++|+..++..+... ..|. +.-.|+.+.+...+... . ....--+.|+
T Consensus 156 Ik~~~~g~~iv~~s~~i~V~~~~edv~~~~~~~~~~------~~~~---~gi~i~k~~~~~~~~~~~~~~~~~~~d~yf~ 226 (298)
T 2o0a_A 156 IKLKFEKHSISLDSKLVIIENGLEDLPLNFSCDEHP------NLPH---SGMGIIKVQFFPRDSKSDGNNDPVPVDFYFI 226 (298)
T ss_dssp CEEEECSSCEEEESCCEEESSGGGGSCTTTTCC----------------CEEEEEEEEEEESCC-------CCCEEEEEE
T ss_pred EEecCCCCEEecccEEEEccccHHHHHHHhhccccc------ccCC---CCceEEEEEEecCcccccccCCCCceEEEEE
Confidence 999999999999999999999 99999888433221 1221 22455555555422111 1 1122346666
Q ss_pred ecCCcccccccccchhchHHHhHhhhhHHHHHHHHHHhccCCCcccCCCCcchhhcccccCCCcceeEEEecCCCCCCHH
Q 037169 476 DLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISSLATKSGHIPYRNSKLTHLLQDSLGGDSKTLMFLQISPSEQDLG 555 (860)
Q Consensus 476 DLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP~~~~~~ 555 (860)
.+.... +...|.+.+ ..+ -+-.|+++-+|+..|. ..|.++++++.-+..
T Consensus 227 e~~~~~--------------------~~~~l~~~~---~~~----~~~~spi~~il~~ll~-~tks~~~~~l~~~~~--- 275 (298)
T 2o0a_A 227 ELNNLK--------------------SIEQFDKSI---FKK----ESCETPIALVLKKLIS-DTKSFFLLNLNDSKN--- 275 (298)
T ss_dssp EECSHH--------------------HHHHHHHHH---HTC-----CCCSHHHHHHHHHHH-HSBCEEEEEECCGGG---
T ss_pred EeCCHH--------------------HHHHHHhhc---ccc----cccCCcHHHHHHHHHh-cCcceEEEEecCCCc---
Confidence 654221 123333322 112 3557888888887664 468899999976532
Q ss_pred hHHHHHHHHHHhhccccc
Q 037169 556 ETLSSLNFASRVRGVELS 573 (860)
Q Consensus 556 ETl~TL~fA~r~r~I~~~ 573 (860)
.-.-|..+.++..+.+.
T Consensus 276 -~~~lL~~s~~i~~~~~~ 292 (298)
T 2o0a_A 276 -VNKLLTISEEVQTQLCK 292 (298)
T ss_dssp -HHHHHHHHHHHHHHTC-
T ss_pred -hhHHHHHHHHhhcccCc
Confidence 23367777777766553
No 31
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.93 E-value=9.2e-27 Score=218.91 Aligned_cols=81 Identities=44% Similarity=0.630 Sum_probs=77.0
Q ss_pred hhhHHHHHHHHHHhccC-CCcccCCCCcchhhcccccCCCcceeEEEecCCCCCCHHhHHHHHHHHHHhhcccccccccc
Q 037169 500 NRSLSALGDVISSLATK-SGHIPYRNSKLTHLLQDSLGGDSKTLMFLQISPSEQDLGETLSSLNFASRVRGVELSPARKQ 578 (860)
Q Consensus 500 NkSL~aLg~vI~aL~~~-~~hVPYRdSKLT~LLqdsLgGnskT~mI~~VSP~~~~~~ETl~TL~fA~r~r~I~~~p~~~~ 578 (860)
|+||++||+||.+|+.+ ..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+|++.|++.|..+.
T Consensus 1 N~SL~~Lg~vi~aL~~~~~~hvPyRdSkLT~lL~dsLggn~~t~~i~~isp~~~~~~eTl~TL~fa~rak~i~n~~~~n~ 80 (117)
T 3kin_B 1 NKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTVSVNL 80 (117)
T ss_dssp CCHHHHHHHHHHHHHHSCCSSCCGGGSHHHHHTHHHHHSSSEEEEEEEECCSGGGHHHHHHHHHHHHHHTTCEEEECCCB
T ss_pred CCCHHHHHHHHHHHHhCCCCCCCCcchHHHHHHHHHcCCCccceeeeeeCCCcccHHHHHHHHHHHHHhCcccCCceecC
Confidence 89999999999999986 47999999999999999999999999999999999999999999999999999999998775
Q ss_pred cC
Q 037169 579 ID 580 (860)
Q Consensus 579 ~~ 580 (860)
..
T Consensus 81 ~~ 82 (117)
T 3kin_B 81 EL 82 (117)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 32
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=99.87 E-value=4.4e-22 Score=199.92 Aligned_cols=105 Identities=29% Similarity=0.494 Sum_probs=91.1
Q ss_pred cccccccccc--CceEEEeeCCCCcEEEEEEeeecccCCCCCcceEEEEEECCEEEeeccchhhccCCCcceEE-EEEEE
Q 037169 2 AVLYQSARFG--NFSYRIGNLSPGDYLVDLHFAEIVNANGPKGMRVFDVFMQEEKVLLEIDIYSIVGANKPLQV-VDVRV 78 (860)
Q Consensus 2 p~lYqTaR~g--~~sY~f~~v~~G~Y~V~LhFaEi~~~~~~~g~RvFdV~ing~~vl~~fDI~~~~G~~~a~~~-~~~~V 78 (860)
+.||+|||++ +++|.||..++|+|+|||||||+++. .+|+|+|||+|||.+++++|||+..+|++.|+.+ +.+.|
T Consensus 54 ~~lY~TaR~~~~~~tY~f~v~~~G~Y~VrLhF~ei~~~--~~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v 131 (174)
T 2jwp_A 54 QVLYQTERYNEDSFGYDIPIKEEGEYVLVLKFAEVYFA--QSQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISI 131 (174)
T ss_dssp HHTTTCCCCCCSCEEEEEECCSCEEEEEEEEEECCSCC--CSSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEE
T ss_pred chhhhhhccCCCCeEEEEEeCCCeEEEEEEEEeccccC--CCCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEE
Confidence 4599999996 68899976678999999999999987 6899999999999999999999998888778777 77765
Q ss_pred ee----------CCCceEEEEEEcc-CCCcEEEEEEEeecC
Q 037169 79 SV----------GMDEVLLIRFDGA-CGSPIVNGICIKNAT 108 (860)
Q Consensus 79 ~~----------~~~g~L~I~F~~~-~g~p~InaIEI~k~~ 108 (860)
+. ..+|.|+|+|.|. ...|+||||||++.+
T Consensus 132 ~~~~l~i~~~~~~~~g~L~I~f~p~~~~~a~inaIEI~~~~ 172 (174)
T 2jwp_A 132 KKGKLSVQGEVSTFTGKLSVEFVKGYYDNPKVCALFIMKGT 172 (174)
T ss_dssp ETTEEEETTEEEECCSEEEEEEECSSSCSSSEEEEEEESSC
T ss_pred ecCceeeeeeecccCCeEEEEEeccCCCCcEEEEEEEEeCc
Confidence 31 2478999999875 677999999999875
No 33
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=96.74 E-value=0.11 Score=54.77 Aligned_cols=144 Identities=6% Similarity=0.095 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhhc
Q 037169 586 KVKMMLEKTKQEVGSKDDVIQKLEENFQNLEVKAKGNVQLCKNQQEKINELESQLESKTQLCRQLEKQLLQVS--EGMKG 663 (860)
Q Consensus 586 ~lk~~l~~~k~e~~~~~~~i~~le~~~~~l~~~~~~~~~~~~~~~~k~~ele~~l~~~~~~~~~le~~l~~l~--~~~~~ 663 (860)
.+...+..+..........+..++..+..+...+.........++..+..++..++.....+..++.++.... ....+
T Consensus 15 ~lD~~i~~l~~~~~~lp~el~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ri~~~~~~l~~v~~~kE~~a 94 (256)
T 3na7_A 15 HLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSERELRS 94 (256)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHH
Confidence 3333333333333333344445555555555544444444555555555566666655555555555554322 11112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 037169 664 KEEICSNVQRKVKELENKLKEHDQSENVTALHHKVRELENRLKARTQEFEVHSGMLQQKIAELEEKLR 731 (860)
Q Consensus 664 ~ee~~~~lq~~~~ele~~l~~~~q~~~~~~le~ki~~lE~kl~~~~~~~e~~~~~lq~qi~eLe~kl~ 731 (860)
....+..+..++..++..+.+.... ++.++..+..++..+......+......+...+.+++.++.
T Consensus 95 L~kEie~~~~~i~~lE~eile~~e~--ie~~~~~l~~~~~~l~~~~~~l~~~~~~~~~~~~e~~~e~~ 160 (256)
T 3na7_A 95 LNIEEDIAKERSNQANREIENLQNE--IKRKSEKQEDLKKEMLELEKLALELESLVENEVKNIKETQQ 160 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233334444444444444433222 22334444444444444444444444445555554444444
No 34
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=95.91 E-value=0.42 Score=50.20 Aligned_cols=123 Identities=18% Similarity=0.183 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHH
Q 037169 602 DDVIQKLEENFQNLEVKAKGNVQLCKNQQEKINELESQLES--KTQLCRQLEKQLLQVSEGMKGKEEICSNVQRKVKELE 679 (860)
Q Consensus 602 ~~~i~~le~~~~~l~~~~~~~~~~~~~~~~k~~ele~~l~~--~~~~~~~le~~l~~l~~~~~~~ee~~~~lq~~~~ele 679 (860)
...+..+...+.+++...............++...+.++.. ..+....+..++..+.......++.+..+..++..++
T Consensus 45 ~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ri~~~~~~l~~v~~~kE~~aL~kEie~~~~~i~~lE~eile~~e~ie~~~ 124 (256)
T 3na7_A 45 NKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKRKS 124 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344444444444333333334444444444433321 1123333444444444433334444444444444443
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 037169 680 NKLKEHDQSENVTALHHKVRELENRLKARTQEFEVHSGMLQQKIAELEEKLRKK 733 (860)
Q Consensus 680 ~~l~~~~q~~~~~~le~ki~~lE~kl~~~~~~~e~~~~~lq~qi~eLe~kl~~Q 733 (860)
..+.. +...+..++..+...+..+......++.++..+..+....
T Consensus 125 ~~l~~---------~~~~l~~~~~~l~~~~~~~~~~~~e~~~e~~~l~~~r~~l 169 (256)
T 3na7_A 125 EKQED---------LKKEMLELEKLALELESLVENEVKNIKETQQIIFKKKEDL 169 (256)
T ss_dssp HHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33322 2333333444444444444444444444444444444333
No 35
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=95.90 E-value=0.1 Score=49.91 Aligned_cols=94 Identities=15% Similarity=0.202 Sum_probs=61.9
Q ss_pred ceEEEeeCCCCcEEEEEEeeecccCCCCCcceEEEEEECCEEEeeccchhhccCCCcceEEEEEEEeeCCCceEEEEEE-
Q 037169 13 FSYRIGNLSPGDYLVDLHFAEIVNANGPKGMRVFDVFMQEEKVLLEIDIYSIVGANKPLQVVDVRVSVGMDEVLLIRFD- 91 (860)
Q Consensus 13 ~sY~f~~v~~G~Y~V~LhFaEi~~~~~~~g~RvFdV~ing~~vl~~fDI~~~~G~~~a~~~~~~~V~~~~~g~L~I~F~- 91 (860)
..|.+....+|.|.|.+.|+- . ..+.|.++|+|||..+...+.+....+... .....+.|... .|.=+|+|.
T Consensus 42 v~~~V~v~~aG~Y~l~~ryan---~--~~~~~~~~l~VNG~~~~~~v~~p~Tg~w~~-w~~~~~~v~L~-aG~ntI~l~~ 114 (144)
T 2w47_A 42 IEWNVNAPSSGSYALIFRYAN---G--TTANRPMRITVNGNIVKPSMDFVSTGAWTT-WNEAGIVANLN-QGNNVIRATA 114 (144)
T ss_dssp EEEEEEESSSEEEEEEEEEEC---C--SSSCCCEEEEETTEEEEEEECCCCCSSTTC-CEEEEEEEEEC-SEEEEEEEEE
T ss_pred EEEEEECCCCcEEEEEEEEEC---C--CCCCeEEEEEECCeEeeeEEEecCCCCCCe-eEEEEEEEEEC-CCccEEEEEE
Confidence 568885445799999999985 1 235689999999997666666644444433 22233334332 455455554
Q ss_pred -ccCCCcEEEEEEEeecCCCCCC
Q 037169 92 -GACGSPIVNGICIKNATNVPES 113 (860)
Q Consensus 92 -~~~g~p~InaIEI~k~~~~~~~ 113 (860)
...+.|.|.-|+|.+.+..+++
T Consensus 115 ~~~~g~~niD~i~v~~~~~~~~~ 137 (144)
T 2w47_A 115 IASDGGPNVDYLKVFSANAFQPL 137 (144)
T ss_dssp CSTTCCCEEEEEEEEECTTSCC-
T ss_pred eCCCCCEEEeEEEEEeCCCCCCc
Confidence 5556799999999987766554
No 36
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=95.85 E-value=0.11 Score=60.61 Aligned_cols=28 Identities=18% Similarity=0.167 Sum_probs=15.5
Q ss_pred EEecCCCCCCHHhHHHHHHHHHHhhccc
Q 037169 544 FLQISPSEQDLGETLSSLNFASRVRGVE 571 (860)
Q Consensus 544 I~~VSP~~~~~~ETl~TL~fA~r~r~I~ 571 (860)
+||-.+........+..+.....+....
T Consensus 391 ~cc~~~~~~~~~~~~~~l~~~~~~~~~~ 418 (597)
T 3oja_B 391 LCCKESDKPYLDRLLQYIALTSVVEKVQ 418 (597)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHTC-
T ss_pred ccccCCCccchhHHHHHhhHHHHhhccc
Confidence 5555555555666666666555554443
No 37
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=95.72 E-value=1.4 Score=44.58 Aligned_cols=10 Identities=20% Similarity=0.109 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 037169 721 QKIAELEEKL 730 (860)
Q Consensus 721 ~qi~eLe~kl 730 (860)
.++..+..++
T Consensus 181 ~~~~~~~~~~ 190 (284)
T 1c1g_A 181 ERAELSEGKC 190 (284)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 38
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=95.66 E-value=0.96 Score=44.49 Aligned_cols=98 Identities=16% Similarity=0.206 Sum_probs=53.9
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHH
Q 037169 588 KMMLEKTKQEVGSKDDVIQKLEENFQNLEVKAKGNVQLCKNQQEKINELESQLESKTQLCRQLEKQLLQVSEGMKGKEEI 667 (860)
Q Consensus 588 k~~l~~~k~e~~~~~~~i~~le~~~~~l~~~~~~~~~~~~~~~~k~~ele~~l~~~~~~~~~le~~l~~l~~~~~~~ee~ 667 (860)
..++..+...+..-.+...++.....++.......+..+.+++.++.-|+..-..+.+.+..|+.+|.+=........+.
T Consensus 12 ekQL~E~n~kLk~EsE~~~rlkK~~tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L~qEr~~r~q~se~ 91 (168)
T 3o0z_A 12 QKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQAILEAERRDRGHDSEM 91 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444333444555666666666555555555666666666666555555555555555555544444445555
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 037169 668 CSNVQRKVKELENKLKEH 685 (860)
Q Consensus 668 ~~~lq~~~~ele~~l~~~ 685 (860)
+.+++.++..|...+...
T Consensus 92 ~~elq~ri~~L~~El~~~ 109 (168)
T 3o0z_A 92 IGDLQARITSLQEEVKHL 109 (168)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 566666666666555543
No 39
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=95.59 E-value=0.27 Score=61.86 Aligned_cols=6 Identities=17% Similarity=0.550 Sum_probs=2.4
Q ss_pred hHHHhh
Q 037169 315 LVTSVL 320 (860)
Q Consensus 315 lV~~~l 320 (860)
+|..++
T Consensus 588 ~v~~lf 593 (1080)
T 2dfs_A 588 LLPELF 593 (1080)
T ss_dssp HHHHSC
T ss_pred HHHHHh
Confidence 344333
No 40
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=95.42 E-value=0.11 Score=65.18 Aligned_cols=41 Identities=10% Similarity=0.248 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 037169 695 HHKVRELENRLKARTQEFEVHSGMLQQKIAELEEKLRKKEE 735 (860)
Q Consensus 695 e~ki~~lE~kl~~~~~~~e~~~~~lq~qi~eLe~kl~~Qee 735 (860)
+.++..+..++++....++.+.+.|++++.+++..+.++++
T Consensus 1011 ee~~~~~~~~L~~kv~~L~~e~~~L~qq~~~l~~~~~~~~~ 1051 (1080)
T 2dfs_A 1011 EEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAK 1051 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333344444444444555556666666655544444
No 41
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=95.23 E-value=0.14 Score=49.26 Aligned_cols=92 Identities=15% Similarity=0.246 Sum_probs=59.7
Q ss_pred ceEEEeeCCCCcEEEEEEeeecccCCCCCcceEEEEEECCEEEeeccchhhccCCCcceEEEEEEEeeCCCceEEEEEE-
Q 037169 13 FSYRIGNLSPGDYLVDLHFAEIVNANGPKGMRVFDVFMQEEKVLLEIDIYSIVGANKPLQVVDVRVSVGMDEVLLIRFD- 91 (860)
Q Consensus 13 ~sY~f~~v~~G~Y~V~LhFaEi~~~~~~~g~RvFdV~ing~~vl~~fDI~~~~G~~~a~~~~~~~V~~~~~g~L~I~F~- 91 (860)
..|.+....+|.|.|.+.|+- . ..+.|.++|+|||..+ ..+.+-...+... .....+.|... .|.=+|+|.
T Consensus 41 v~~~V~v~~aG~Y~l~~ryan---g--~~~~r~~~l~VNG~~~-~~v~~p~Tg~W~~-w~t~~~~v~L~-aG~ntI~l~~ 112 (145)
T 2w3j_A 41 IVWSLSAASAKTYTAQIRFGN---G--GTSARRATVVVNDSQI-KTLDFPTNSNWTQ-WQTVNVDIPLK-AGTNSIKLVA 112 (145)
T ss_dssp EEEEEEESSCEEEEEEEEEEC---C--SSSCCCEEEEETTEEE-EEECCCCCSCTTS-CEEEEEEEEEC-SEEEEEEEEE
T ss_pred EEEEEECCCCeEEEEEEEEEC---C--CCCCeEEEEEECCeEe-eEEEecCCCCCCe-eEEEEEEEEEC-CCceEEEEEE
Confidence 568885445799999999983 1 3357999999999875 5566544444433 22233344432 454445554
Q ss_pred -ccCCCcEEEEEEEeecCCCCC
Q 037169 92 -GACGSPIVNGICIKNATNVPE 112 (860)
Q Consensus 92 -~~~g~p~InaIEI~k~~~~~~ 112 (860)
+..+.|-|.-|+|.+.++.+.
T Consensus 113 ~~~~g~~niD~i~v~~~~~~~~ 134 (145)
T 2w3j_A 113 ETADGLANIDSIRVTGNGITPA 134 (145)
T ss_dssp CSTTCCCEEEEEEECSTTEEEC
T ss_pred ecCcCCEEEEEEEEEcCCCCCC
Confidence 355779999999987655444
No 42
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=94.87 E-value=0.081 Score=67.26 Aligned_cols=14 Identities=43% Similarity=0.665 Sum_probs=7.5
Q ss_pred HhhhhhccCCCeEE
Q 037169 258 KMVSTIQVLGNIRV 271 (860)
Q Consensus 258 ~~~~~~~~~gnIrV 271 (860)
+++..|--+|||..
T Consensus 353 ~ilaaiLhlGni~f 366 (1184)
T 1i84_S 353 RVVSSVLQLGNIVF 366 (1184)
T ss_dssp HHHHHHHHTTTCCC
T ss_pred HHHHHHHhhcCcee
Confidence 34444445677753
No 43
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=94.65 E-value=0.047 Score=69.42 Aligned_cols=8 Identities=38% Similarity=0.476 Sum_probs=3.7
Q ss_pred CCCcceeE
Q 037169 536 GGDSKTLM 543 (860)
Q Consensus 536 gGnskT~m 543 (860)
-|.++++|
T Consensus 768 iG~TKVF~ 775 (1184)
T 1i84_S 768 IGQSKIFF 775 (1184)
T ss_dssp BCSSEEEE
T ss_pred EcCeEEEE
Confidence 34455443
No 44
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=94.59 E-value=0.7 Score=46.41 Aligned_cols=100 Identities=21% Similarity=0.237 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH----HHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037169 145 AKCEKRIKELKIQCQLKTDECYEAWMSLTAANDQ----LEKVRMGLDNKCFQNLCLDQALEKQAAKLKDVASLYERDKRL 220 (860)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (860)
+.++++..+|+.++.....++..++..+..++.+ +..+..++.. ...-...+...+.+|....-++++..|.
T Consensus 52 ~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~el~~----l~~~~~~l~~~ireLEq~NDdlEr~~R~ 127 (189)
T 2v71_A 52 VQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQ----TRAIKEQLHKYVRELEQANDDLERAKRA 127 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 3444444444555555555555544444444433 3333333322 2333455566667777778888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 037169 221 WIIAMNELERKILIWKEEHSQLAREAHE 248 (860)
Q Consensus 221 ~~~~~~~~~~~~~~~~~e~~~l~~e~~~ 248 (860)
....+.+++.++........-|..|+.+
T Consensus 128 ~~~SleD~e~kln~aiEr~alLE~El~E 155 (189)
T 2v71_A 128 TIMSLEDFEQRLNQAIERNAFLESELDE 155 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998887777766666554
No 45
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=93.84 E-value=3.4 Score=38.81 Aligned_cols=52 Identities=29% Similarity=0.374 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHh
Q 037169 634 NELESQLESKTQLCRQLEKQLLQVSEGMKGKEEICSNVQRKVKELENKLKEH 685 (860)
Q Consensus 634 ~ele~~l~~~~~~~~~le~~l~~l~~~~~~~ee~~~~lq~~~~ele~~l~~~ 685 (860)
.+++...........+|..+|..-.......++.|..+...-.+|+.++.+.
T Consensus 37 ~ele~~~~~l~~Ek~~L~~qL~~E~~~l~e~EE~~~~L~~~k~eLe~~l~el 88 (129)
T 2fxo_A 37 KELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEM 88 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444455555555444555556667777666666666666543
No 46
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=93.36 E-value=0.37 Score=45.44 Aligned_cols=97 Identities=20% Similarity=0.186 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037169 147 CEKRIKELKIQCQLKTDECYEAWMSLTAANDQLEKVRMGLDNKCFQNLCLDQALEKQAAKLKDVASLYERDKRLWIIAMN 226 (860)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (860)
|..+++++......-.++.......+.+++..+.++..+++.+..++.+|.. .|+++...|+.........+.
T Consensus 13 y~~K~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~-------~l~e~e~~~~~~l~~~q~~i~ 85 (129)
T 3tnu_B 13 YQTKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQN-------AIADAEQRGELALKDARNKLA 85 (129)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
Confidence 6667777766665555555555666666667777777777665444444443 356777788888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhc
Q 037169 227 ELERKILIWKEEHSQLAREAHECA 250 (860)
Q Consensus 227 ~~~~~~~~~~~e~~~l~~e~~~~~ 250 (860)
.++..+..++.+..+...|.+...
T Consensus 86 ~lE~eL~~~r~e~~~ql~EYq~Ll 109 (129)
T 3tnu_B 86 ELEEALQKAKQDMARLLREYQELM 109 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999988887777766543
No 47
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=93.14 E-value=3.7 Score=56.86 Aligned_cols=25 Identities=28% Similarity=0.509 Sum_probs=17.4
Q ss_pred hHHHhhC-CccEEEEeeccCCCCccccc
Q 037169 315 LVTSVLD-GYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 315 lV~~~l~-G~N~~IfaYGqTGSGKTyTM 341 (860)
++..++. |.+ |+-+|+||||||-++
T Consensus 1296 ll~~ll~~~~p--vLL~GptGtGKT~li 1321 (3245)
T 3vkg_A 1296 VLHAWLSEHRP--LILCGPPGSGKTMTL 1321 (3245)
T ss_dssp HHHHHHHTTCC--CEEESSTTSSHHHHH
T ss_pred HHHHHHHCCCc--EEEECCCCCCHHHHH
Confidence 5555554 444 467899999999655
No 48
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=93.02 E-value=3.1 Score=38.23 Aligned_cols=97 Identities=22% Similarity=0.241 Sum_probs=66.5
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHH----HHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037169 148 EKRIKELKIQCQLKTDECYEAWMSLTAA----NDQLEKVRMGLDNKCFQNLCLDQALEKQAAKLKDVASLYERDKRLWII 223 (860)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (860)
+++..+|+.++....-++.+.+..+..+ +..+..+..++..+ +.-...+...+.+|+.-.-+|++..+....
T Consensus 2 Ek~~rdL~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~El~~l----r~~~~~l~~~iReLEq~NDDLER~~R~t~~ 77 (111)
T 2v66_B 2 EQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQT----RAIKEQLHKYVRELEQANDDLERAKRATIV 77 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhchHHHHHHHHHHh
Confidence 4556666666666666666655544444 34445555555443 333455666677777778899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Q 037169 224 AMNELERKILIWKEEHSQLAREAHE 248 (860)
Q Consensus 224 ~~~~~~~~~~~~~~e~~~l~~e~~~ 248 (860)
.+.+++.++........-|..|+.+
T Consensus 78 SLeD~E~k~n~aiErnalLE~El~E 102 (111)
T 2v66_B 78 SLEDFEQRLNQAIERNAFLESELDE 102 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888877777766554
No 49
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=92.93 E-value=0.36 Score=45.70 Aligned_cols=97 Identities=10% Similarity=0.111 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037169 147 CEKRIKELKIQCQLKTDECYEAWMSLTAANDQLEKVRMGLDNKCFQNLCLDQALEKQAAKLKDVASLYERDKRLWIIAMN 226 (860)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (860)
|..+++++......-.+........+.+++..+.++..+++.+..++.+|.. .|+++...|+.....+...+.
T Consensus 15 y~~K~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~~l~~~~~sLE~-------~l~e~e~~~~~~l~~~q~~i~ 87 (131)
T 3tnu_A 15 FFTKTEELNREVATNSELVQSGKSEISELRRTMQNLEIELQSQLSMKASLEN-------SLEETKGRYCMQLAQIQEMIG 87 (131)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
Confidence 6667777776666655555556666667777777777777665444444433 466777788888888888899
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhc
Q 037169 227 ELERKILIWKEEHSQLAREAHECA 250 (860)
Q Consensus 227 ~~~~~~~~~~~e~~~l~~e~~~~~ 250 (860)
.++..+..++.+..+...|.+...
T Consensus 88 ~lE~eL~~~r~em~~ql~EYq~Ll 111 (131)
T 3tnu_A 88 SVEEQLAQLRCEMEQQNQEYKILL 111 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988887777766543
No 50
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=92.66 E-value=2.8 Score=58.06 Aligned_cols=82 Identities=9% Similarity=0.178 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH---HHHHHHHHhhHHHHHHHH
Q 037169 648 RQLEKQLLQVSEGMKGKEEICSNVQRKVKELENKLKEHDQSENVTALHHKVRELENRLK---ARTQEFEVHSGMLQQKIA 724 (860)
Q Consensus 648 ~~le~~l~~l~~~~~~~ee~~~~lq~~~~ele~~l~~~~q~~~~~~le~ki~~lE~kl~---~~~~~~e~~~~~lq~qi~ 724 (860)
.+++.+++...+++..+++.+.++++++++++.++.+...+ .+.++.+.+..+.++. ++..-+..+..+|.+++.
T Consensus 2017 ~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~e--k~~L~~e~~~~~~kl~rA~~Li~gL~~Ek~RW~~~~~ 2094 (3245)
T 3vkg_A 2017 EQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRE--TEQIKTESSKVKNKVDRSIALLDNLNSERGRWEQQSE 2094 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhhhhccccHHHHHH
Confidence 33344444444444444444444444444444444333222 2234445544444433 333344556677888887
Q ss_pred HHHHHHH
Q 037169 725 ELEEKLR 731 (860)
Q Consensus 725 eLe~kl~ 731 (860)
+++.++.
T Consensus 2095 ~l~~~~~ 2101 (3245)
T 3vkg_A 2095 NFNTQMS 2101 (3245)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776655
No 51
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=92.66 E-value=0.69 Score=42.91 Aligned_cols=85 Identities=21% Similarity=0.184 Sum_probs=53.1
Q ss_pred ceEEEeeCCCCcEEEEEEeeecccCCCCCcceEEEEEECCEEEeeccchhhccCCCcceEEEEEEEeeCCCceEEEEEE-
Q 037169 13 FSYRIGNLSPGDYLVDLHFAEIVNANGPKGMRVFDVFMQEEKVLLEIDIYSIVGANKPLQVVDVRVSVGMDEVLLIRFD- 91 (860)
Q Consensus 13 ~sY~f~~v~~G~Y~V~LhFaEi~~~~~~~g~RvFdV~ing~~vl~~fDI~~~~G~~~a~~~~~~~V~~~~~g~L~I~F~- 91 (860)
..|.+....+|.|.|.++++-- ..+.|.++|+|||..+...+.+-...+... .....+.|... .|.=+|+|.
T Consensus 41 v~~~V~v~~aG~Y~l~~rya~~-----~~~~~~~~l~VnG~~~~~~v~~p~tg~W~~-w~~~~~~v~L~-aG~ntI~l~~ 113 (127)
T 2vzp_A 41 VEWTVTVPSAGTYDVVVRYANG-----TTTSRPLDFSVNGSISASGVAFGSTGTWPA-WTTKTVRVTLA-AGVNKIKAVA 113 (127)
T ss_dssp EEEEEEESSSEEEEEEEEEECC-----SSSCCCEEEEETTEEEEEEECCCCCSSTTC-CEEEEEEEEEC-SEEEEEEEEE
T ss_pred EEEEEEcCCCCEEEEEEEEEcC-----CCCCeEEEEEECCEEeeeEEEecCCCCCCc-eEEEEEEEEEC-CCceEEEEEE
Confidence 5688854457999999999861 224688999999998655566644434433 22223334332 555445554
Q ss_pred -ccCCCcEEEEEEE
Q 037169 92 -GACGSPIVNGICI 104 (860)
Q Consensus 92 -~~~g~p~InaIEI 104 (860)
...+.|-|.-|+|
T Consensus 114 ~~~~~~~niD~i~v 127 (127)
T 2vzp_A 114 TTANGGPNVDKITL 127 (127)
T ss_dssp CSTTCCCEEEEEEC
T ss_pred eCCCCCeEEEEEEC
Confidence 3446688887764
No 52
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=92.43 E-value=1.5 Score=51.04 Aligned_cols=39 Identities=18% Similarity=0.228 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Q 037169 695 HHKVRELENRLKARTQEFEVHSGMLQQKIAELEEKLRKKEEYA 737 (860)
Q Consensus 695 e~ki~~lE~kl~~~~~~~e~~~~~lq~qi~eLe~kl~~Qeeq~ 737 (860)
+++..++|.++++.++... .+.++...+.++++++++.+
T Consensus 543 ~~~~~~le~~~~~~~~~~~----~l~~e~~~~~~~~~~l~~~~ 581 (597)
T 3oja_B 543 EQENIALEKQLDNKRAKQA----ELRQETSLKRQKVKQLEAKK 581 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHTT
T ss_pred HhhhHHHHHHHhhhhhHHH----HHHHHHHHHHHHHHHHHHHh
Confidence 3444444444444333322 34445555555555555554
No 53
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=92.38 E-value=6.1 Score=37.09 Aligned_cols=53 Identities=13% Similarity=0.166 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHH
Q 037169 627 KNQQEKINELESQLESKTQLCRQLEKQLLQVSEGMKGKEEICSNVQRKVKELE 679 (860)
Q Consensus 627 ~~~~~k~~ele~~l~~~~~~~~~le~~l~~l~~~~~~~ee~~~~lq~~~~ele 679 (860)
..+......|..++......+.+.+..+..+.......+..+..+...+.+.+
T Consensus 44 ~~l~~Ek~~L~~qL~~E~~~l~e~EE~~~~L~~~k~eLe~~l~el~~rleeee 96 (129)
T 2fxo_A 44 VSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNKRLEDEE 96 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555555555555555555555555444444444444444444433
No 54
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=92.03 E-value=11 Score=37.80 Aligned_cols=16 Identities=25% Similarity=0.055 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHHHH
Q 037169 582 SKLQKVKMMLEKTKQE 597 (860)
Q Consensus 582 ~~~~~lk~~l~~~k~e 597 (860)
.++.-|+......+++
T Consensus 10 ee~~ywk~~~~~~~q~ 25 (189)
T 2v71_A 10 EETAYWKELSMKYKQS 25 (189)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3455565554444443
No 55
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=91.48 E-value=3.9 Score=36.88 Aligned_cols=9 Identities=11% Similarity=0.113 Sum_probs=3.4
Q ss_pred HHHHHHHHh
Q 037169 590 MLEKTKQEV 598 (860)
Q Consensus 590 ~l~~~k~e~ 598 (860)
.+..++.+.
T Consensus 10 Km~~lk~e~ 18 (101)
T 3u1c_A 10 KMQMLKLDK 18 (101)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333344333
No 56
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=90.63 E-value=14 Score=36.35 Aligned_cols=67 Identities=12% Similarity=0.095 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHH
Q 037169 604 VIQKLEENFQNLEVKAKGNVQLCKNQQEKINELESQLESKTQLCRQLEKQLLQVSEGMKGKEEICSN 670 (860)
Q Consensus 604 ~i~~le~~~~~l~~~~~~~~~~~~~~~~k~~ele~~l~~~~~~~~~le~~l~~l~~~~~~~ee~~~~ 670 (860)
.+..++..+.+|.............+++.+..|+.+++..+....+....+..+..++.+....+..
T Consensus 42 ~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L~qEr~~r~q~se~~~elq~ri~~L~~El~~ 108 (168)
T 3o0z_A 42 SISQLESLNRELQERNRILENSKSQTDKDYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKH 108 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444444455555555555544444444444444444333333333333
No 57
>4etp_B Spindle POLE BODY-associated protein VIK1; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=90.58 E-value=1.4 Score=47.48 Aligned_cols=235 Identities=14% Similarity=0.178 Sum_probs=119.4
Q ss_pred hHHhhhhhccC-CCeEEEEEeCCCCchhhhCCCceEEEecCCC---CCccceeE-------------EEEeccchhhHHH
Q 037169 256 LNKMVSTIQVL-GNIRVFCRCRPLSKEEASAGHAMVVDFSAAK---DGELGILT-------------VDVFADASPLVTS 318 (860)
Q Consensus 256 ~~~~~~~~~~~-gnIrV~~RvRP~~~~E~~~~~~~~v~~~~~~---~~~~~~~~-------------~dVf~~v~plV~~ 318 (860)
.++|-|.|.++ |.||+|+=+-+-..++ ...+++.... .+.-..+. ..+|.+..+.++.
T Consensus 47 RRkLENSIdElKG~IRcFAYi~~~~~p~-----~~~idY~~~~It~~~~~~~y~FnRiIp~~~~~e~~~l~qE~q~y~Dm 121 (333)
T 4etp_B 47 SRRLENSIIEQKGTMRVYAYVMEQNLPE-----NLLFDYENGVITQGLSEHVYKFNRVIPHLKVSEDCFFTQEYSVYHDM 121 (333)
T ss_dssp HHHHHHHHHHHHTCCEEEEEECCSSCCS-----SCEEETTTTEEEC--CCCEEECSEEEETTTCCHHHHHHHTTHHHHHH
T ss_pred HHHHhhhHHHhcCcEEEEEEECcccCCc-----cEEEecccceEeecCCcceEEEeeeechhhcchHHHHHHHHHHHHHH
Confidence 35666666555 9999999886632111 1223322110 00001111 2256678999999
Q ss_pred hh-CCccEEEEeeccCCCCccccccCCCCCCCchhhHHHHHHHHHHHhc--CCceEEEEEEEEEEeccc-cccccCCCCC
Q 037169 319 VL-DGYNVCIFAYGQTGTGKTFTMEGTQQNRGVNYRTLELLFKIAEERK--ETFTYSISVSALEVYNEQ-IRDLLDTSPT 394 (860)
Q Consensus 319 ~l-~G~N~~IfaYGqTGSGKTyTM~G~~~~~GIipRal~~LF~~~~~~~--~~~~~~V~vS~lEIYnE~-i~DLL~~~~~ 394 (860)
++ .+.|+.||.-|..- .+.....|+..+.... -.+.|.+.+.|+.+-++. ..|||.+...
T Consensus 122 cL~~~~NfslIsis~~~----------------w~~Lr~~lL~fi~~k~~~Y~~~y~i~lQ~V~Lse~~~S~DlL~~~~~ 185 (333)
T 4etp_B 122 ALNQKKNFNLISLSTTP----------------HGSLRESLIKFLAEKDTIYQKQYVITLQFVFLSDDEFSQDMLLDYSH 185 (333)
T ss_dssp HHHTTCCEEEEEEESSC----------------CCHHHHHHHHHHHSTTCHHHHHEEEEEEEEECCSSSCCEESSCC---
T ss_pred HHccCCCeeEEEecCCC----------------cHHHHHHHHHHHHhcccccccceEEEEEEEEEcCCCchhhhhccccc
Confidence 99 89999999998541 1223444555554330 036889999998887665 6899986432
Q ss_pred CC----ceEEEecCCCceEecCeeEEEeCChHHHHHHHhhh-hhcCccccCCCCCCCCCceEEEEEEEEEeecc-CC--c
Q 037169 395 SK----KLEIRQASEGFHHVPGLTEAKIENIKEVWDVLHIG-SNARAVGSNNVNEHSSRSHCMLCISVKAKNLI-NG--E 466 (860)
Q Consensus 395 ~~----~l~i~~~~~g~~~v~gl~e~~V~s~~e~~~ll~~g-~~~R~~~sT~~N~~SSRSH~If~i~v~~~~~~-~~--~ 466 (860)
.. .+.+.++ .+. -+-+.+.+.+..+.+..+..- ...+ .. ...-.|+.+.+...+.. ++ .
T Consensus 186 ~~~~~I~lkiee~---sI~-ldS~~i~i~~~~~~l~~~~kl~~~~~--------~~-~~GI~IlKfqf~~~~~~~~~n~~ 252 (333)
T 4etp_B 186 NDKDSIKLKFEKH---SIS-LDSKLVIIENGLEDLPLNFSADEHPN--------LP-HSGMGIIKVQFFPRDSKSDGNND 252 (333)
T ss_dssp -------CEEETT---EEE-CCSCCEEESSGGGGSCTTSSCCC-----------------CEEEEEEEEECC--------
T ss_pred cCCCCceEEeecc---eEe-ecceEEEeccccccchhhhccccCCC--------CC-CCCceEEEEEEEecCcccccccC
Confidence 21 2222221 111 133445555554433332211 1011 01 12345666666554322 11 1
Q ss_pred eeEeeEEEeecCCcccccccccchhchHHHhHhhhhHHHHHHHHHHhccCCCcccCCCCcchhhcccccCCCcceeEEEe
Q 037169 467 CTKSKLWLVDLAGSERLAKTEVQGERLKEAQNINRSLSALGDVISSLATKSGHIPYRNSKLTHLLQDSLGGDSKTLMFLQ 546 (860)
Q Consensus 467 ~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSKLT~LLqdsLgGnskT~mI~~ 546 (860)
...-..+||.+-+.. ....|.++|.- . -.-.|+++-+|+-.|. ..|.+++.+
T Consensus 253 ~~~~~fYFiEi~~~~--------------------ti~~l~~~i~~----~---~~~~spi~~ilkkLl~-~TKS~flfn 304 (333)
T 4etp_B 253 PVPVDFYFIELNNLK--------------------SIEQFDKSIFK----K---ESAETPIALVLKKLIS-DTKSFFLLN 304 (333)
T ss_dssp CCCEEEEEEEECSHH--------------------HHHHHHSCC-----------CCCCHHHHHHHHHHH-HSBCEEEEE
T ss_pred CcceeEEEEEecChh--------------------HHHHHHhhcCc----c---cccCCCHHHHHHHHHh-hCcceEEEE
Confidence 123468888876543 12233333221 1 1345677777776554 468899999
Q ss_pred cCCCCC
Q 037169 547 ISPSEQ 552 (860)
Q Consensus 547 VSP~~~ 552 (860)
+.-...
T Consensus 305 l~~~~~ 310 (333)
T 4etp_B 305 LNDSKN 310 (333)
T ss_dssp ECCSTT
T ss_pred cCCcch
Confidence 976643
No 58
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=90.56 E-value=13 Score=36.06 Aligned_cols=33 Identities=21% Similarity=0.331 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q 037169 693 ALHHKVRELENRLKARTQEFEVHSGMLQQKIAE 725 (860)
Q Consensus 693 ~le~ki~~lE~kl~~~~~~~e~~~~~lq~qi~e 725 (860)
.|++.+..+|.++...+..+......|...+.+
T Consensus 102 kLEk~id~lEd~L~~~Kek~~~i~~eLd~tl~e 134 (155)
T 2efr_A 102 KLEKSIDDLEDELYAQKLKYKAISEEMKQLEDK 134 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455556666655555444444444444443333
No 59
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=90.42 E-value=1.1 Score=42.67 Aligned_cols=89 Identities=12% Similarity=0.187 Sum_probs=56.0
Q ss_pred ceEEEeeCCCCcEEEEEEeeecccCCCCCcceEEEEEECCEEE-eeccchhhccCCCcceEEEEEEEeeCCCceEEEEEE
Q 037169 13 FSYRIGNLSPGDYLVDLHFAEIVNANGPKGMRVFDVFMQEEKV-LLEIDIYSIVGANKPLQVVDVRVSVGMDEVLLIRFD 91 (860)
Q Consensus 13 ~sY~f~~v~~G~Y~V~LhFaEi~~~~~~~g~RvFdV~ing~~v-l~~fDI~~~~G~~~a~~~~~~~V~~~~~g~L~I~F~ 91 (860)
..|.+.....|.|.|.+.|+- . ..+.|.++|+|||..+ ...+.+-...+... .....+.|... .|.=+|+|.
T Consensus 41 v~~~V~v~~aG~Y~l~~ryan---g--~~~~r~~~l~VNG~~~g~~~v~~p~Tg~W~~-w~t~~~~v~L~-aG~ntI~l~ 113 (139)
T 2w87_A 41 VVWAIDATSSGRRTLTIRYAN---G--GTANRNGSLVINGGSNGNYTVSLPTTGAWTT-WQTATIDVDLV-QGNNIVQLS 113 (139)
T ss_dssp EEEEEEESSCEEEEEEEEEEC---C--SSSCCCEEEEETTTTTCEEEECCCCCSSTTC-CEEEEEEEEEC-SEEEEEEEE
T ss_pred EEEEEECCCCcEEEEEEEEEC---C--CCCCceEEEEECCEEcceeEEEecCCCCCCc-cEEEEEEEEEC-CCceEEEEE
Confidence 568885445799999999975 1 2236889999999765 35566644444433 22223344432 454445554
Q ss_pred --ccCCCcEEEEEEEeecC
Q 037169 92 --GACGSPIVNGICIKNAT 108 (860)
Q Consensus 92 --~~~g~p~InaIEI~k~~ 108 (860)
...+.|-|.-|+|.+..
T Consensus 114 ~~~~~g~~niD~i~v~~~~ 132 (139)
T 2w87_A 114 ATTAEGLPNIDSLSVVGGT 132 (139)
T ss_dssp ESSTTCCCEEEEEEEESSS
T ss_pred EcCCCCCEEEEEEEEecCC
Confidence 33467999999997643
No 60
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=90.06 E-value=5.2 Score=35.96 Aligned_cols=25 Identities=12% Similarity=0.105 Sum_probs=9.0
Q ss_pred HHHHHHHhcChHHHHHHHHHHHHHH
Q 037169 591 LEKTKQEVGSKDDVIQKLEENFQNL 615 (860)
Q Consensus 591 l~~~k~e~~~~~~~i~~le~~~~~l 615 (860)
+..++.+.....+....++..+...
T Consensus 11 m~~lk~e~e~a~d~ae~~e~~~k~~ 35 (101)
T 3u59_A 11 MQMLKLDKENAIDRAEQAEADKKQA 35 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333333
No 61
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=89.93 E-value=1.6 Score=48.15 Aligned_cols=80 Identities=15% Similarity=0.233 Sum_probs=55.4
Q ss_pred ceEEEeeCCCCcEEEEEEeeecccCCCCCcceEEEEEECCEEEeeccchhhccCCCcceEEEEEEEeeCCCceEEEEEEc
Q 037169 13 FSYRIGNLSPGDYLVDLHFAEIVNANGPKGMRVFDVFMQEEKVLLEIDIYSIVGANKPLQVVDVRVSVGMDEVLLIRFDG 92 (860)
Q Consensus 13 ~sY~f~~v~~G~Y~V~LhFaEi~~~~~~~g~RvFdV~ing~~vl~~fDI~~~~G~~~a~~~~~~~V~~~~~g~L~I~F~~ 92 (860)
++|.+ .+|+|+|.|++.|..- . .=.|..++...+. ...|. .....+.+++. +|.++|.+..
T Consensus 78 ~~f~v-~~~~g~Y~v~v~~g~~--------~-~~~v~~e~~~~~~-----~~~g~-~~~~~~~v~~~---~g~~~l~~~~ 138 (375)
T 2o14_A 78 NTFNV-DLPNGLYEVKVTLGNT--------A-RASVAAEGVFQVI-----NMTGD-GAEDTFQIPVT---DGQLNLLVTE 138 (375)
T ss_dssp CCEEE-ECCSEEEEEEEEESSC--------S-EEEEEETTEEEEE-----EEEST-TCEEEEEEEEC---SSEEEEEEEE
T ss_pred eEEEE-EcCCCceEEEEEecCC--------c-ceEEEEcceEEEE-----ecCCC-cEEEEEEEEee---CCeEEEeeee
Confidence 45777 7899999999999873 1 1346778875544 33343 23334667777 8999999873
Q ss_pred c--CCCcEEEEEEEeecCCCC
Q 037169 93 A--CGSPIVNGICIKNATNVP 111 (860)
Q Consensus 93 ~--~g~p~InaIEI~k~~~~~ 111 (860)
. ...+.|++|+|.+.+..+
T Consensus 139 ~~~g~~~~l~~i~v~~~~~~~ 159 (375)
T 2o14_A 139 GKAGTAFTLSALKIKKLSDQP 159 (375)
T ss_dssp SSTTSCCEEEEEEEEEEESSC
T ss_pred ccCCCCcccceEEEeccCCCC
Confidence 3 345899999999876543
No 62
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}
Probab=89.43 E-value=2.6 Score=40.83 Aligned_cols=92 Identities=16% Similarity=0.127 Sum_probs=55.6
Q ss_pred ceEE-EeeCCCCcEEEEEEeeecccC-----CCCCcceEEEEEECCEEEeeccchhhccCCCcceEEEEEEEeeCCCceE
Q 037169 13 FSYR-IGNLSPGDYLVDLHFAEIVNA-----NGPKGMRVFDVFMQEEKVLLEIDIYSIVGANKPLQVVDVRVSVGMDEVL 86 (860)
Q Consensus 13 ~sY~-f~~v~~G~Y~V~LhFaEi~~~-----~~~~g~RvFdV~ing~~vl~~fDI~~~~G~~~a~~~~~~~V~~~~~g~L 86 (860)
..|. +.....|.|.|.++|+.-... ....+.|.++|+|||.. ...+++....+.... ....+.|... .|.=
T Consensus 49 vtf~~V~~~~aG~Y~l~irYang~~~~~~~y~~~~~~r~~~v~VNG~~-~~~v~fp~Tg~W~~~-~~~tv~V~L~-aG~N 125 (156)
T 2wz8_A 49 LQFNNVYVPQAGTYRMVVQFANAEVFGQHSYNNNVVDRYCSISVNGGP-EKGHYFFNTRGWNTY-RTDIIDVYLN-AGNN 125 (156)
T ss_dssp EEEEEEEESSCEEEEEEEEEECCCBC-------CBCCEEEEEEETTCC-CEEEEECCCSSTTCC-EEEEEEEEEC-SEEE
T ss_pred EEEEEEecCCCcEEEEEEEEECCCcccccccCCccCcceEEEEECCce-eeEEEeCCCCCCCcc-eEEEEEEEEC-CCce
Confidence 4577 744457999999999873211 00225899999999976 334444333333332 2233344322 6666
Q ss_pred EEEEEcc--C-CCcEEEEEEEeec
Q 037169 87 LIRFDGA--C-GSPIVNGICIKNA 107 (860)
Q Consensus 87 ~I~F~~~--~-g~p~InaIEI~k~ 107 (860)
+|+|... . ..|-|-.|.|.+.
T Consensus 126 tI~~~~~~~~~~~pdiD~i~v~~~ 149 (156)
T 2wz8_A 126 TIRFYNGTSGSYAPNIDKIAIAAL 149 (156)
T ss_dssp EEEEECCSTTCBCCEEEEEEEEC-
T ss_pred EEEEEecCCCCCCcEEEEEEEecc
Confidence 7888655 3 3489999998654
No 63
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=87.88 E-value=6.2 Score=44.97 Aligned_cols=12 Identities=42% Similarity=0.274 Sum_probs=0.0
Q ss_pred cCCCchHHHHHh
Q 037169 791 LKGTNSLRELRR 802 (860)
Q Consensus 791 ~~~~~~~~~~~~ 802 (860)
-.|+.+..|--|
T Consensus 257 ~~g~gs~~~s~r 268 (562)
T 3ghg_A 257 SYGTGSETESPR 268 (562)
T ss_dssp ------------
T ss_pred CCCCCCCCCCCC
Confidence 334444444333
No 64
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=86.63 E-value=3.5 Score=46.57 Aligned_cols=43 Identities=30% Similarity=0.546 Sum_probs=32.3
Q ss_pred EEEEeeccCCCCcccccc--------------CC---CCCCCchhhHHHHHHHHHHHhcC
Q 037169 325 VCIFAYGQTGTGKTFTME--------------GT---QQNRGVNYRTLELLFKIAEERKE 367 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM~--------------G~---~~~~GIipRal~~LF~~~~~~~~ 367 (860)
-.|+-||++|+|||++.. |+ ....|-.++.++.+|........
T Consensus 207 rGiLL~GPPGtGKT~lakAiA~~~~~~~~~v~~~~l~~~~~Ge~e~~ir~lF~~A~~~aP 266 (428)
T 4b4t_K 207 RGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAP 266 (428)
T ss_dssp CEEEEESCTTTTHHHHHHHHHHHHTCEEEEEEGGGTCCSSCSHHHHHHHHHHHHHHHTCS
T ss_pred ceEEEECCCCCCHHHHHHHHHHHhCCCeEEEecchhhccccchhHHHHHHHHHHHHHcCC
Confidence 358999999999997653 11 13457888999999998876543
No 65
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=86.45 E-value=18 Score=32.49 Aligned_cols=13 Identities=23% Similarity=0.355 Sum_probs=6.7
Q ss_pred hhHHHHHHHHHHH
Q 037169 715 HSGMLQQKIAELE 727 (860)
Q Consensus 715 ~~~~lq~qi~eLe 727 (860)
....|.++|.-|+
T Consensus 87 ev~~L~RriqllE 99 (101)
T 3u1c_A 87 EVASLNRRIQLVE 99 (101)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc
Confidence 3455555555554
No 66
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=81.52 E-value=0.52 Score=44.87 Aligned_cols=30 Identities=17% Similarity=0.161 Sum_probs=23.2
Q ss_pred chhhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 312 ASPLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 312 v~plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
+..++..+..+....|+-||++|+|||+.+
T Consensus 31 ~~~l~~~l~~~~~~~~ll~G~~G~GKT~l~ 60 (195)
T 1jbk_A 31 IRRTIQVLQRRTKNNPVLIGEPGVGKTAIV 60 (195)
T ss_dssp HHHHHHHHTSSSSCEEEEECCTTSCHHHHH
T ss_pred HHHHHHHHhcCCCCceEEECCCCCCHHHHH
Confidence 445555555666677899999999999976
No 67
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=81.32 E-value=22 Score=40.62 Aligned_cols=14 Identities=21% Similarity=0.368 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHH
Q 037169 602 DDVIQKLEENFQNL 615 (860)
Q Consensus 602 ~~~i~~le~~~~~l 615 (860)
...|.+|..++.++
T Consensus 63 tkrINELKnqLEdl 76 (562)
T 3ghg_A 63 TNRINKLKNSLFEY 76 (562)
T ss_dssp HHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34455555555555
No 68
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=80.97 E-value=26 Score=32.32 Aligned_cols=20 Identities=25% Similarity=0.325 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 037169 694 LHHKVRELENRLKARTQEFE 713 (860)
Q Consensus 694 le~ki~~lE~kl~~~~~~~e 713 (860)
|+.+++.|...+.-++..++
T Consensus 88 LE~~iesL~eEl~FLKk~he 107 (119)
T 3ol1_A 88 LERKVESLQEEIAFLKKLHE 107 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444333
No 69
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=80.00 E-value=33 Score=30.66 Aligned_cols=14 Identities=21% Similarity=0.332 Sum_probs=7.1
Q ss_pred HhhHHHHHHHHHHH
Q 037169 714 VHSGMLQQKIAELE 727 (860)
Q Consensus 714 ~~~~~lq~qi~eLe 727 (860)
.+...|.++|.-++
T Consensus 86 ~evasLnRriqllE 99 (101)
T 3u59_A 86 AEVASLNRRIQLVE 99 (101)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc
Confidence 34455555555544
No 70
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=79.98 E-value=4.6 Score=45.20 Aligned_cols=43 Identities=35% Similarity=0.524 Sum_probs=32.4
Q ss_pred EEEEeeccCCCCcccccc--------------CC---CCCCCchhhHHHHHHHHHHHhcC
Q 037169 325 VCIFAYGQTGTGKTFTME--------------GT---QQNRGVNYRTLELLFKIAEERKE 367 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM~--------------G~---~~~~GIipRal~~LF~~~~~~~~ 367 (860)
-.|+-||++|+|||+..- |+ ..-.|--.+.++.+|........
T Consensus 183 rGvLL~GPPGTGKTllAkAiA~e~~~~f~~v~~s~l~sk~vGese~~vr~lF~~Ar~~aP 242 (405)
T 4b4t_J 183 KGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAP 242 (405)
T ss_dssp CCEEEESCSSSSHHHHHHHHHHHHTCEEEEEEGGGGSCSSTTHHHHHHHHHHHHHHHTCS
T ss_pred CceEEeCCCCCCHHHHHHHHHHhhCCCceEEEhHHhhccccchHHHHHHHHHHHHHHhCC
Confidence 468999999999998752 21 12357778999999998876543
No 71
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=79.17 E-value=54 Score=36.02 Aligned_cols=6 Identities=17% Similarity=0.252 Sum_probs=2.9
Q ss_pred CCCccc
Q 037169 749 TPYNAT 754 (860)
Q Consensus 749 ~p~~~~ 754 (860)
.|..+|
T Consensus 217 vP~~fK 222 (390)
T 1deq_A 217 VPREFK 222 (390)
T ss_pred CChhhc
Confidence 444555
No 72
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=79.10 E-value=0.54 Score=44.80 Aligned_cols=30 Identities=17% Similarity=0.156 Sum_probs=23.2
Q ss_pred chhhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 312 ASPLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 312 v~plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
+..++..+..+....|+-||++|+|||+.+
T Consensus 31 ~~~l~~~l~~~~~~~vll~G~~G~GKT~la 60 (187)
T 2p65_A 31 IRRAIQILSRRTKNNPILLGDPGVGKTAIV 60 (187)
T ss_dssp HHHHHHHHTSSSSCEEEEESCGGGCHHHHH
T ss_pred HHHHHHHHhCCCCCceEEECCCCCCHHHHH
Confidence 445555555666778899999999999976
No 73
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=78.40 E-value=4.7 Score=45.61 Aligned_cols=43 Identities=28% Similarity=0.488 Sum_probs=31.8
Q ss_pred EEEEeeccCCCCcccccc--------------CC---CCCCCchhhHHHHHHHHHHHhcC
Q 037169 325 VCIFAYGQTGTGKTFTME--------------GT---QQNRGVNYRTLELLFKIAEERKE 367 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM~--------------G~---~~~~GIipRal~~LF~~~~~~~~ 367 (860)
-.|+-||++|+|||++.- |+ ....|--.+.+..+|........
T Consensus 216 rGvLL~GPPGtGKTllAkAiA~e~~~~~~~v~~s~l~sk~~Gese~~ir~~F~~A~~~~P 275 (437)
T 4b4t_L 216 KGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEP 275 (437)
T ss_dssp CEEEEESCTTSSHHHHHHHHHHHHTCEEEEEEGGGTCCSSSSHHHHHHHHHHHHHHHSCS
T ss_pred CeEEEECCCCCcHHHHHHHHHHHhCCCEEEEehhhhccccchHHHHHHHHHHHHHHhcCC
Confidence 468899999999998652 11 12357778899999998876543
No 74
>1vec_A ATP-dependent RNA helicase P54; DEAD-box protein, RNA binding protein; HET: TLA; 2.01A {Homo sapiens} SCOP: c.37.1.19
Probab=77.68 E-value=0.91 Score=44.60 Aligned_cols=26 Identities=31% Similarity=0.451 Sum_probs=20.3
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..+++|.| ++..++||||||.+.
T Consensus 32 ~~i~~~~~~~~--~lv~apTGsGKT~~~ 57 (206)
T 1vec_A 32 ESIPIALSGRD--ILARAKNGTGKSGAY 57 (206)
T ss_dssp HHHHHHHTTCC--EEEECCSSSTTHHHH
T ss_pred HHHHHHccCCC--EEEECCCCCchHHHH
Confidence 45677788977 467789999999754
No 75
>1qde_A EIF4A, translation initiation factor 4A; DEAD box protein family, gene regulation; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 1qva_A
Probab=77.57 E-value=0.83 Score=45.60 Aligned_cols=25 Identities=36% Similarity=0.603 Sum_probs=20.7
Q ss_pred hhHHHhhCCccEEEEeeccCCCCcccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFT 340 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyT 340 (860)
..+..++.|.| ++..++||||||.+
T Consensus 43 ~~i~~~~~~~~--~lv~~pTGsGKT~~ 67 (224)
T 1qde_A 43 RAIMPIIEGHD--VLAQAQSGTGKTGT 67 (224)
T ss_dssp HHHHHHHTTCC--EEEECCTTSSHHHH
T ss_pred HHHHHHhcCCC--EEEECCCCCcHHHH
Confidence 45677888987 57789999999987
No 76
>2gxq_A Heat resistant RNA dependent ATPase; RNA helicase, atomic resolution, AMP complex, ribosome biogenesis, thermophilic, hydrolase; HET: AMP; 1.20A {Thermus thermophilus HB27} PDB: 2gxs_A* 2gxu_A 3mwj_A 3mwk_A* 3mwl_A* 3nbf_A* 3nej_A
Probab=77.52 E-value=0.85 Score=44.79 Aligned_cols=26 Identities=31% Similarity=0.579 Sum_probs=20.3
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..+++|.| ++..++||||||.+.
T Consensus 30 ~~i~~~~~~~~--~li~~~TGsGKT~~~ 55 (207)
T 2gxq_A 30 AALPLALEGKD--LIGQARTGTGKTLAF 55 (207)
T ss_dssp HHHHHHHTTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHHcCCCC--EEEECCCCChHHHHH
Confidence 45677888887 456789999999873
No 77
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=76.85 E-value=0.35 Score=46.98 Aligned_cols=18 Identities=28% Similarity=0.327 Sum_probs=15.2
Q ss_pred cEEEEeeccCCCCccccc
Q 037169 324 NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM 341 (860)
...++-||++|||||+.+
T Consensus 38 g~~~~l~G~~G~GKTtL~ 55 (180)
T 3ec2_A 38 GKGLTFVGSPGVGKTHLA 55 (180)
T ss_dssp CCEEEECCSSSSSHHHHH
T ss_pred CCEEEEECCCCCCHHHHH
Confidence 355778999999999987
No 78
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=76.60 E-value=47 Score=30.60 Aligned_cols=30 Identities=20% Similarity=0.391 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 037169 699 RELENRLKARTQEFEVHSGMLQQKIAELEE 728 (860)
Q Consensus 699 ~~lE~kl~~~~~~~e~~~~~lq~qi~eLe~ 728 (860)
-.||.+++.++.++.+....-++.+.+|+.
T Consensus 86 ~dLE~~iesL~eEl~FLKk~heeEl~eLq~ 115 (119)
T 3ol1_A 86 LDLERKVESLQEEIAFLKKLHEEEIQELQA 115 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356777777777777665555555555543
No 79
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=76.59 E-value=47 Score=38.94 Aligned_cols=57 Identities=23% Similarity=0.394 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHH----HhhHHHHHHHHHHHHH
Q 037169 669 SNVQRKVKELENKLKEHDQSENVTALHHKVRELENRLKARTQEFE----VHSGMLQQKIAELEEK 729 (860)
Q Consensus 669 ~~lq~~~~ele~~l~~~~q~~~~~~le~ki~~lE~kl~~~~~~~e----~~~~~lq~qi~eLe~k 729 (860)
..+++.+++|++++.+..+ ..++..-+.++.++++....++ .....++.+|.+|+++
T Consensus 522 ~~~~e~~~ql~~kme~~~~----~~~~e~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ei~~l~~~ 582 (592)
T 1f5n_A 522 RSYQEHLKQLTEKMENDRV----QLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTK 582 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445555555554432211 1233444455555555444333 3334444444444443
No 80
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=75.98 E-value=52 Score=30.80 Aligned_cols=6 Identities=67% Similarity=0.855 Sum_probs=2.2
Q ss_pred HHHHHH
Q 037169 677 ELENKL 682 (860)
Q Consensus 677 ele~~l 682 (860)
+||..|
T Consensus 102 ELEADL 107 (167)
T 4gkw_A 102 ELEADL 107 (167)
T ss_dssp HHHHTH
T ss_pred HHHhHH
Confidence 333333
No 81
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae}
Probab=75.95 E-value=0.63 Score=50.55 Aligned_cols=30 Identities=10% Similarity=-0.007 Sum_probs=23.0
Q ss_pred chhhHHHhh-CCccEEEEeeccCCCCccccc
Q 037169 312 ASPLVTSVL-DGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 312 v~plV~~~l-~G~N~~IfaYGqTGSGKTyTM 341 (860)
+...+..++ .|...+|+-||++|+|||.+.
T Consensus 32 i~~~L~~~i~~~~~~~lli~GpPGTGKT~~v 62 (318)
T 3te6_A 32 IFLPIYDSLMSSQNKLFYITNADDSTKFQLV 62 (318)
T ss_dssp HHHHHHHHHHTTCCCEEEEECCCSHHHHHHH
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCCHHHHH
Confidence 334444444 577889999999999999976
No 82
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=74.20 E-value=13 Score=32.16 Aligned_cols=50 Identities=8% Similarity=0.060 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHH
Q 037169 626 CKNQQEKINELESQLESKTQLCRQLEKQLLQVSEGMKGKEEICSNVQRKV 675 (860)
Q Consensus 626 ~~~~~~k~~ele~~l~~~~~~~~~le~~l~~l~~~~~~~ee~~~~lq~~~ 675 (860)
...++.++..++..++........+..++..+.+.+..+-..+.++.+.+
T Consensus 22 N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld~KI~eL~elRqgL 71 (79)
T 3cvf_A 22 NAELEHQLRAMERSLEEARAERERARAEVGRAAQLLDVSLFELSELREGL 71 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34455666666666666665555565566555554444444444444433
No 83
>3dkp_A Probable ATP-dependent RNA helicase DDX52; DEAD, ADP, structural genomics, structural GEN consortium, SGC, rRNA, ATP-binding, hydrolase; HET: ADP; 2.10A {Homo sapiens}
Probab=74.15 E-value=1.2 Score=45.20 Aligned_cols=26 Identities=31% Similarity=0.580 Sum_probs=21.0
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.+ ++..++||||||.+.
T Consensus 58 ~~i~~~~~~~~--~l~~a~TGsGKT~~~ 83 (245)
T 3dkp_A 58 QAIPVMLHGRE--LLASAPTGSGKTLAF 83 (245)
T ss_dssp HHHHHHHTTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHHhCCCC--EEEECCCCCcHHHHH
Confidence 45677888988 577899999999873
No 84
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=73.60 E-value=0.98 Score=48.47 Aligned_cols=19 Identities=26% Similarity=0.742 Sum_probs=16.3
Q ss_pred cEEEEeeccCCCCcccccc
Q 037169 324 NVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM~ 342 (860)
...|+-||++|+||||.+.
T Consensus 152 ~~~lll~G~~GtGKT~La~ 170 (308)
T 2qgz_A 152 QKGLYLYGDMGIGKSYLLA 170 (308)
T ss_dssp CCEEEEECSTTSSHHHHHH
T ss_pred CceEEEECCCCCCHHHHHH
Confidence 5678889999999999873
No 85
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=73.56 E-value=26 Score=29.74 Aligned_cols=50 Identities=18% Similarity=0.244 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHH
Q 037169 626 CKNQQEKINELESQLESKTQLCRQLEKQLLQVSEGMKGKEEICSNVQRKV 675 (860)
Q Consensus 626 ~~~~~~k~~ele~~l~~~~~~~~~le~~l~~l~~~~~~~ee~~~~lq~~~ 675 (860)
...++.++..++.+++........+..++..+.+.+..+-..+.++.+.+
T Consensus 16 N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~~~e~Ld~KI~eL~elrq~L 65 (72)
T 3cve_A 16 NKDLEGQLSEMEQRLEKSQSEQDAFRSNLKTLLEILDGKIFELTELRDNL 65 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34456666677777766666556666666555554444444444444433
No 86
>3bor_A Human initiation factor 4A-II; translation initiation, DEAD BOX, structural genomics, helic binding, HOST-virus interaction, hydrolase; 1.85A {Homo sapiens} PDB: 2g9n_A*
Probab=73.55 E-value=0.81 Score=46.56 Aligned_cols=26 Identities=38% Similarity=0.685 Sum_probs=21.1
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.| ++..++||||||.+.
T Consensus 59 ~ai~~i~~~~~--~li~apTGsGKT~~~ 84 (237)
T 3bor_A 59 RAIIPCIKGYD--VIAQAQSGTGKTATF 84 (237)
T ss_dssp HHHHHHHTTCC--EEECCCSSHHHHHHH
T ss_pred HHHHHHhCCCC--EEEECCCCCcHHHHH
Confidence 46677888988 567899999999874
No 87
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=72.66 E-value=1.4 Score=49.50 Aligned_cols=28 Identities=25% Similarity=0.351 Sum_probs=23.8
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
+++..++......|.-.|+||||||+||
T Consensus 157 ~~L~~l~~~~ggii~I~GpnGSGKTTlL 184 (418)
T 1p9r_A 157 DNFRRLIKRPHGIILVTGPTGSGKSTTL 184 (418)
T ss_dssp HHHHHHHTSSSEEEEEECSTTSCHHHHH
T ss_pred HHHHHHHHhcCCeEEEECCCCCCHHHHH
Confidence 4677777767788999999999999998
No 88
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=72.34 E-value=1.1 Score=44.05 Aligned_cols=17 Identities=29% Similarity=0.606 Sum_probs=15.3
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-||++|+|||+.+
T Consensus 55 ~~~~l~G~~GtGKT~la 71 (202)
T 2w58_A 55 KGLYLHGSFGVGKTYLL 71 (202)
T ss_dssp CEEEEECSTTSSHHHHH
T ss_pred CeEEEECCCCCCHHHHH
Confidence 67888999999999976
No 89
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=71.89 E-value=75 Score=30.76 Aligned_cols=26 Identities=15% Similarity=0.146 Sum_probs=13.5
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHh
Q 037169 712 FEVHSGMLQQKIAELEEKLRKKEEYA 737 (860)
Q Consensus 712 ~e~~~~~lq~qi~eLe~kl~~Qeeq~ 737 (860)
++.....|+.++.+.+..+..++.|+
T Consensus 113 ~e~r~~~L~~ql~e~~~~l~~lq~ql 138 (154)
T 2ocy_A 113 IEILNKRLTEQLREKDTLLDTLTLQL 138 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455555555555555555555
No 90
>2pl3_A Probable ATP-dependent RNA helicase DDX10; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; HET: ADP; 2.15A {Homo sapiens}
Probab=71.86 E-value=1.5 Score=44.26 Aligned_cols=26 Identities=31% Similarity=0.551 Sum_probs=20.1
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.++ +..++||||||.+.
T Consensus 54 ~~i~~~~~~~~~--li~a~TGsGKT~~~ 79 (236)
T 2pl3_A 54 QTIGLALQGKDV--LGAAKTGSGKTLAF 79 (236)
T ss_dssp HHHHHHHTTCCE--EEECCTTSCHHHHH
T ss_pred HHHHHHhCCCCE--EEEeCCCCcHHHHH
Confidence 456677889884 56789999999863
No 91
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=71.81 E-value=1.3 Score=42.23 Aligned_cols=17 Identities=29% Similarity=0.767 Sum_probs=14.4
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
-.++-||++|||||+.+
T Consensus 37 ~~~~l~G~~G~GKTtL~ 53 (149)
T 2kjq_A 37 QFIYVWGEEGAGKSHLL 53 (149)
T ss_dssp SEEEEESSSTTTTCHHH
T ss_pred CEEEEECCCCCCHHHHH
Confidence 35667999999999987
No 92
>1t6n_A Probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; HET: FLC; 1.94A {Homo sapiens} SCOP: c.37.1.19
Probab=71.35 E-value=1.5 Score=43.66 Aligned_cols=26 Identities=19% Similarity=0.436 Sum_probs=20.4
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..+++|.| ++..++||||||.+.
T Consensus 43 ~~i~~~~~~~~--~li~~~TGsGKT~~~ 68 (220)
T 1t6n_A 43 ECIPQAILGMD--VLCQAKSGMGKTAVF 68 (220)
T ss_dssp HHHHHHHTTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHHhCCCC--EEEECCCCCchhhhh
Confidence 45677888988 556779999999865
No 93
>3iuy_A Probable ATP-dependent RNA helicase DDX53; REC-A-like, DEAD-BOX, structural genomics, structural genomi consortium, SGC, ATP-binding, hydrolase; HET: AMP; 2.40A {Homo sapiens}
Probab=71.26 E-value=1.6 Score=43.86 Aligned_cols=26 Identities=35% Similarity=0.547 Sum_probs=20.5
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..+++|.|+ +..++||||||.+.
T Consensus 49 ~~i~~~~~~~~~--l~~apTGsGKT~~~ 74 (228)
T 3iuy_A 49 QAWPIILQGIDL--IVVAQTGTGKTLSY 74 (228)
T ss_dssp HHHHHHHTTCCE--EEECCTTSCHHHHH
T ss_pred HHHHHHhCCCCE--EEECCCCChHHHHH
Confidence 456677889876 66789999999864
No 94
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=71.20 E-value=78 Score=30.67 Aligned_cols=53 Identities=25% Similarity=0.345 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHh
Q 037169 633 INELESQLESKTQLCRQLEKQLLQVSEGMKGKEEICSNVQRKVKELENKLKEH 685 (860)
Q Consensus 633 ~~ele~~l~~~~~~~~~le~~l~~l~~~~~~~ee~~~~lq~~~~ele~~l~~~ 685 (860)
++.|+..-+.-.+....++.+|..+..+++..+.........+..|+..+..+
T Consensus 58 lKsLE~seekasqrEd~yEeqIk~L~~kLKEAE~RAE~AERsv~kLEk~id~l 110 (155)
T 2efr_A 58 LKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDL 110 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444445556666777777777777766666666666666665543
No 95
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=70.89 E-value=1.5 Score=48.31 Aligned_cols=29 Identities=28% Similarity=0.363 Sum_probs=23.5
Q ss_pred hhhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 313 SPLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 313 ~plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
.+.+.+++.-..+.|.-.|+||||||+||
T Consensus 112 ~~~l~~l~~~~~g~i~I~GptGSGKTTlL 140 (356)
T 3jvv_A 112 GEVFKRVSDVPRGLVLVTGPTGSGKSTTL 140 (356)
T ss_dssp CHHHHHHHHCSSEEEEEECSTTSCHHHHH
T ss_pred hHHHHHHHhCCCCEEEEECCCCCCHHHHH
Confidence 35666767666678899999999999988
No 96
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=70.10 E-value=67 Score=29.52 Aligned_cols=8 Identities=13% Similarity=-0.130 Sum_probs=3.5
Q ss_pred hHHHHHHH
Q 037169 162 TDECYEAW 169 (860)
Q Consensus 162 ~~~~~~~~ 169 (860)
..||.+.-
T Consensus 20 q~ECrN~T 27 (121)
T 3mq7_A 20 VMEARNVT 27 (121)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhHH
Confidence 34454433
No 97
>1wrb_A DJVLGB; RNA helicase, DEAD BOX, VASA, structural genomics, NPPSFA, N project on protein structural and functional analyses; 2.40A {Dugesia japonica} SCOP: c.37.1.19
Probab=69.85 E-value=1.6 Score=44.52 Aligned_cols=26 Identities=31% Similarity=0.560 Sum_probs=20.4
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..+++|.|+ +..++||||||.+.
T Consensus 52 ~~i~~i~~~~~~--l~~a~TGsGKT~~~ 77 (253)
T 1wrb_A 52 NAIPAILEHRDI--MACAQTGSGKTAAF 77 (253)
T ss_dssp HHHHHHHTTCCE--EEECCTTSSHHHHH
T ss_pred HHHHHHhCCCCE--EEECCCCChHHHHH
Confidence 456778889885 56689999999864
No 98
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=69.78 E-value=62 Score=28.95 Aligned_cols=53 Identities=21% Similarity=0.362 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHH
Q 037169 630 QEKINELESQLESKTQLCRQLEKQLLQVSEGMKGKEEICSNVQRKVKELENKL 682 (860)
Q Consensus 630 ~~k~~ele~~l~~~~~~~~~le~~l~~l~~~~~~~ee~~~~lq~~~~ele~~l 682 (860)
++++..++.++......+..|...+..-.......+.....+..++..|...|
T Consensus 11 re~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLTasL 63 (97)
T 2eqb_B 11 KEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASL 63 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444443333333344445555555555555433
No 99
>3b6e_A Interferon-induced helicase C domain-containing P; DECH, DEXD/H RNA-binding helicase, innate immunity, IFIH1, S genomics; 1.60A {Homo sapiens}
Probab=69.64 E-value=0.86 Score=44.80 Aligned_cols=26 Identities=35% Similarity=0.450 Sum_probs=20.5
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..+++|.+ ++..|+||||||.+.
T Consensus 40 ~~i~~~~~~~~--~li~~~tGsGKT~~~ 65 (216)
T 3b6e_A 40 EVAQPALEGKN--IIICLPTGSGKTRVA 65 (216)
T ss_dssp HHHHHHHTTCC--EEEECSCHHHHHHHH
T ss_pred HHHHHHhcCCC--EEEEcCCCCCHHHHH
Confidence 45667778877 456899999999976
No 100
>3ly5_A ATP-dependent RNA helicase DDX18; alpha-beta, structural genomics, structural genomics consort ATP-binding, hydrolase, nucleotide-binding, RNA-B; 2.80A {Homo sapiens}
Probab=69.60 E-value=1.3 Score=46.08 Aligned_cols=26 Identities=31% Similarity=0.644 Sum_probs=21.0
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.| ++..++||||||.+.
T Consensus 83 ~~i~~~~~~~~--~lv~a~TGsGKT~~~ 108 (262)
T 3ly5_A 83 KSIRPLLEGRD--LLAAAKTGSGKTLAF 108 (262)
T ss_dssp HHHHHHHHTCC--CEECCCTTSCHHHHH
T ss_pred HHHHHHhCCCc--EEEEccCCCCchHHH
Confidence 46677888977 577899999999863
No 101
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=69.03 E-value=94 Score=35.28 Aligned_cols=17 Identities=12% Similarity=0.343 Sum_probs=12.8
Q ss_pred ccccCCCchHHHHHhhh
Q 037169 788 SDLLKGTNSLRELRRKR 804 (860)
Q Consensus 788 ~~~~~~~~~~~~~~~~~ 804 (860)
..+.=|.+.++.++..+
T Consensus 294 gEfWLGle~ih~LT~~~ 310 (464)
T 1m1j_B 294 GEYWLGNDKISQLTKIG 310 (464)
T ss_dssp CSEECCHHHHHHHHTTS
T ss_pred eeeEecccceeeccCCC
Confidence 35666888999998754
No 102
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=69.03 E-value=69 Score=29.21 Aligned_cols=20 Identities=25% Similarity=0.242 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 037169 717 GMLQQKIAELEEKLRKKEEY 736 (860)
Q Consensus 717 ~~lq~qi~eLe~kl~~Qeeq 736 (860)
+.++.+..+|+.++.....|
T Consensus 86 Ekl~~eKe~L~~ql~~Lq~q 105 (110)
T 2v4h_A 86 EKLVEKKEYLQEQLEQLQRE 105 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHH
Confidence 34555555555555554444
No 103
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=68.68 E-value=82 Score=35.75 Aligned_cols=24 Identities=29% Similarity=0.634 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhc
Q 037169 718 MLQQKIAELEEKLRKKEEYATAYC 741 (860)
Q Consensus 718 ~lq~qi~eLe~kl~~Qeeq~~~~~ 741 (860)
.+..+|..|+..+..+.+.....|
T Consensus 179 ~l~~ki~~l~~~~~~~~~~~~~~~ 202 (464)
T 1m1j_B 179 SLHKKIQKLENAIATQTDYCRSPC 202 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSBC
T ss_pred HHHHHHHHHHHHHHHHHHhhhccc
Confidence 455666677777766665544433
No 104
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=68.44 E-value=1.6 Score=42.47 Aligned_cols=22 Identities=32% Similarity=0.252 Sum_probs=16.9
Q ss_pred hCCccEEEEeeccCCCCccccc
Q 037169 320 LDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 320 l~G~N~~IfaYGqTGSGKTyTM 341 (860)
-.|....++-||++|+|||+.+
T Consensus 34 ~~~~~~~~ll~G~~G~GKT~l~ 55 (226)
T 2chg_A 34 ERKNIPHLLFSGPPGTGKTATA 55 (226)
T ss_dssp HTTCCCCEEEECSTTSSHHHHH
T ss_pred hCCCCCeEEEECCCCCCHHHHH
Confidence 3444445999999999999975
No 105
>2oxc_A Probable ATP-dependent RNA helicase DDX20; DEAD, structural genomics, structural genomics consortium, SGC, hydrolase; HET: ADP; 1.30A {Homo sapiens} PDB: 3b7g_A*
Probab=67.77 E-value=1.9 Score=43.42 Aligned_cols=25 Identities=24% Similarity=0.331 Sum_probs=19.7
Q ss_pred hhHHHhhCCccEEEEeeccCCCCcccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFT 340 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyT 340 (860)
..+..++.|.|+ +..++||||||.+
T Consensus 53 ~~i~~~~~~~~~--l~~a~TGsGKT~~ 77 (230)
T 2oxc_A 53 KAIPLGRCGLDL--IVQAKSGTGKTCV 77 (230)
T ss_dssp HHHHHHHTTCCE--EEECCTTSSHHHH
T ss_pred HHHHHHhCCCCE--EEECCCCCcHHHH
Confidence 356677889885 5577999999987
No 106
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=67.53 E-value=1.8 Score=42.93 Aligned_cols=26 Identities=19% Similarity=0.362 Sum_probs=19.2
Q ss_pred HHHhhC-CccEEEEeeccCCCCccccc
Q 037169 316 VTSVLD-GYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 316 V~~~l~-G~N~~IfaYGqTGSGKTyTM 341 (860)
+..++. +....|+-||++|+|||+.+
T Consensus 43 l~~~~~~~~~~~~ll~G~~G~GKT~la 69 (242)
T 3bos_A 43 LKSAASGDGVQAIYLWGPVKSGRTHLI 69 (242)
T ss_dssp HHHHHHTCSCSEEEEECSTTSSHHHHH
T ss_pred HHHHHhCCCCCeEEEECCCCCCHHHHH
Confidence 334433 35667889999999999976
No 107
>3ber_A Probable ATP-dependent RNA helicase DDX47; DEAD, AMP, structural genomics, structural GEN consortium, SGC, ATP-binding, hydrolase; HET: AMP PGE; 1.40A {Homo sapiens}
Probab=67.36 E-value=2 Score=44.16 Aligned_cols=26 Identities=27% Similarity=0.489 Sum_probs=20.0
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.++ +..++||||||.+.
T Consensus 72 ~~i~~i~~~~~~--lv~a~TGsGKT~~~ 97 (249)
T 3ber_A 72 EAIPLALQGRDI--IGLAETGSGKTGAF 97 (249)
T ss_dssp HHHHHHHTTCCE--EEECCTTSCHHHHH
T ss_pred HHHHHHhCCCCE--EEEcCCCCCchhHh
Confidence 356677889875 55679999999874
No 108
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=67.24 E-value=35 Score=31.16 Aligned_cols=40 Identities=8% Similarity=0.013 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 037169 143 SMAKCEKRIKELKIQCQLKTDECYEAWMSLTAANDQLEKV 182 (860)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 182 (860)
.++.+...+....+.+..+..+|.++.+.+...+..|+++
T Consensus 25 ei~~L~~~L~~AEeaL~~Kq~~idelk~ei~q~~~~lE~I 64 (110)
T 2v4h_A 25 QLEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKIVMETV 64 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677777777777778888888888888776666666554
No 109
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Homo sapiens}
Probab=67.18 E-value=2.1 Score=46.47 Aligned_cols=26 Identities=38% Similarity=0.676 Sum_probs=21.6
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.+ ++..++||||||.+.
T Consensus 69 ~~i~~~~~~~~--~lv~a~TGsGKT~~~ 94 (414)
T 3eiq_A 69 RAILPCIKGYD--VIAQAQSGTGKTATF 94 (414)
T ss_dssp HHHHHHHTTCC--EEECCCSCSSSHHHH
T ss_pred HHhHHHhCCCC--EEEECCCCCcccHHH
Confidence 46778889988 577999999999874
No 110
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=66.64 E-value=35 Score=29.77 Aligned_cols=34 Identities=24% Similarity=0.131 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Q 037169 209 DVASLYERDKRLWII---AMNELERKILIWKEEHSQL 242 (860)
Q Consensus 209 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~e~~~l 242 (860)
++.+++..+++-+-+ .-.+|+.++..++.|+.-|
T Consensus 46 ~~E~d~~~LrkdvD~a~l~r~dLE~kvesL~eEl~fL 82 (86)
T 3swk_A 46 EAENTLQSFRQDVDNASLARLDLERKVESLQEEIAFL 82 (86)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444443322 3356777777777776644
No 111
>3fe2_A Probable ATP-dependent RNA helicase DDX5; DEAD, ADP, ATP-binding, hydrolase, nucleotide- RNA-binding, methylation, mRNA processing, mRNA S nucleus; HET: ADP; 2.60A {Homo sapiens} PDB: 4a4d_A
Probab=66.43 E-value=2.1 Score=43.48 Aligned_cols=26 Identities=31% Similarity=0.460 Sum_probs=19.9
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.|+ +..++||||||.+.
T Consensus 58 ~~i~~~~~g~~~--l~~apTGsGKT~~~ 83 (242)
T 3fe2_A 58 QGWPVALSGLDM--VGVAQTGSGKTLSY 83 (242)
T ss_dssp HHHHHHHHTCCE--EEEECTTSCHHHHH
T ss_pred HHHHHHhCCCCE--EEECCCcCHHHHHH
Confidence 456677889875 45679999999874
No 112
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=65.80 E-value=31 Score=32.80 Aligned_cols=6 Identities=0% Similarity=0.324 Sum_probs=2.9
Q ss_pred Hhhccc
Q 037169 566 RVRGVE 571 (860)
Q Consensus 566 r~r~I~ 571 (860)
+++.|.
T Consensus 40 km~ei~ 45 (138)
T 3hnw_A 40 KITEFN 45 (138)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 445554
No 113
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=65.73 E-value=2.4 Score=44.32 Aligned_cols=28 Identities=29% Similarity=0.304 Sum_probs=20.2
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
+++..+.-.....+.-.|+||||||+++
T Consensus 15 ~vl~~i~i~~g~~v~i~Gp~GsGKSTll 42 (261)
T 2eyu_A 15 DKVLELCHRKMGLILVTGPTGSGKSTTI 42 (261)
T ss_dssp THHHHGGGCSSEEEEEECSTTCSHHHHH
T ss_pred HHHHHHhhCCCCEEEEECCCCccHHHHH
Confidence 3444443344567888999999999987
No 114
>3fmo_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 2.51A {Homo sapiens}
Probab=65.68 E-value=2 Score=45.68 Aligned_cols=28 Identities=29% Similarity=0.303 Sum_probs=21.0
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|..--++++++||||||.+.
T Consensus 121 ~ai~~il~~~~~~~l~~a~TGsGKT~a~ 148 (300)
T 3fmo_B 121 NALPLMLAEPPQNLIAQSQSGTGKTAAF 148 (300)
T ss_dssp HHHHHHTSSSCCCEEEECCTTSSHHHHH
T ss_pred HHHHHHHcCCCCeEEEECCCCCCccHHH
Confidence 3566778884444688999999999874
No 115
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=65.55 E-value=2.1 Score=43.55 Aligned_cols=26 Identities=23% Similarity=0.405 Sum_probs=19.1
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
.++..+..|.+ ++..|+||||||..+
T Consensus 68 ~~i~~i~~g~~--~~i~g~TGsGKTt~~ 93 (235)
T 3llm_A 68 EILEAISQNSV--VIIRGATGCGKTTQV 93 (235)
T ss_dssp HHHHHHHHCSE--EEEECCTTSSHHHHH
T ss_pred HHHHHHhcCCE--EEEEeCCCCCcHHhH
Confidence 45556667764 567899999999755
No 116
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=64.68 E-value=1.4e+02 Score=33.12 Aligned_cols=17 Identities=12% Similarity=0.053 Sum_probs=7.9
Q ss_pred ecCCCCCCHHhHHHHHH
Q 037169 546 QISPSEQDLGETLSSLN 562 (860)
Q Consensus 546 ~VSP~~~~~~ETl~TL~ 562 (860)
.|+....+-+....=|+
T Consensus 279 ~I~~~sk~~eaA~~Fi~ 295 (471)
T 3mq9_A 279 GINAASPNKELAKEFLE 295 (471)
T ss_dssp EEBSSCSCHHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHH
Confidence 34444445555544443
No 117
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=63.86 E-value=22 Score=31.55 Aligned_cols=48 Identities=15% Similarity=0.215 Sum_probs=35.7
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q 037169 676 KELENKLKEHDQSENVTALHHKVRELENRLKARTQEFEVHSGMLQQKIAE 725 (860)
Q Consensus 676 ~ele~~l~~~~q~~~~~~le~ki~~lE~kl~~~~~~~e~~~~~lq~qi~e 725 (860)
++.|.++..+.++ +..+++.+-+||....+.++.||.+...|+.++..
T Consensus 39 ~eyE~ki~~Qi~E--mq~Ir~tvyeLE~~h~kmKq~YEeEI~rLr~eLe~ 86 (92)
T 3vp9_A 39 KDYDFKMNQQLAE--MQQIRNTVYERELTHRKMKDAYEEEIKHLKLGLEQ 86 (92)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666666655554 44578889999999999999999877777766543
No 118
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=63.65 E-value=1.7e+02 Score=33.37 Aligned_cols=23 Identities=22% Similarity=0.301 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHH
Q 037169 696 HKVRELENRLKARTQEFEVHSGM 718 (860)
Q Consensus 696 ~ki~~lE~kl~~~~~~~e~~~~~ 718 (860)
+.++.+..++..+++..+.+++-
T Consensus 189 ~mi~~yr~k~~aL~~aIe~Er~~ 211 (526)
T 3iyk_A 189 VMVKEYRDKIDALKNAIEVERDG 211 (526)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhH
Confidence 34455555555555555544333
No 119
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=63.54 E-value=2.7 Score=43.44 Aligned_cols=21 Identities=24% Similarity=0.189 Sum_probs=18.2
Q ss_pred CCccEEEEeeccCCCCccccc
Q 037169 321 DGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 321 ~G~N~~IfaYGqTGSGKTyTM 341 (860)
......|+-||++|+|||+..
T Consensus 61 ~~~~~~vLl~G~~GtGKT~la 81 (272)
T 1d2n_A 61 RTPLVSVLLEGPPHSGKTALA 81 (272)
T ss_dssp SCSEEEEEEECSTTSSHHHHH
T ss_pred CCCCeEEEEECCCCCcHHHHH
Confidence 566778999999999999975
No 120
>2bgo_A Endo-B1,4-mannanase 5C; carbohydrate binding protein, carbohydrate binding module; NMR {Cellvibrio japonicus} PDB: 2bgp_A
Probab=63.47 E-value=54 Score=31.27 Aligned_cols=88 Identities=11% Similarity=0.118 Sum_probs=53.5
Q ss_pred ceEEEeeCCCCcEEEEEEeeecccCCCCCcceEEEEEECCEEEeeccchhhccCCCcceEEEEEEEeeCCCceEEEEEEc
Q 037169 13 FSYRIGNLSPGDYLVDLHFAEIVNANGPKGMRVFDVFMQEEKVLLEIDIYSIVGANKPLQVVDVRVSVGMDEVLLIRFDG 92 (860)
Q Consensus 13 ~sY~f~~v~~G~Y~V~LhFaEi~~~~~~~g~RvFdV~ing~~vl~~fDI~~~~G~~~a~~~~~~~V~~~~~g~L~I~F~~ 92 (860)
.+|.|+....|.|.+.+.|+. +.|.-+=.|+|||. ..++-. ........+. ..+... .|.=+|.|..
T Consensus 38 Vtf~VdVP~tG~YdLsI~Ya~------~~G~k~n~L~VNG~--~~~V~f-P~tt~~~~~~-~~V~L~---aG~NtI~i~~ 104 (140)
T 2bgo_A 38 VIWNVDVPVTGEYRINLTWSS------PYSSKVNTLVMDGT--ALSYAF-AEATVPVTYV-QTKTLS---AGNHSFGVRV 104 (140)
T ss_dssp EEEEECCCSSEEEEEEEEECC------CSSEEEEEEEETTE--EEEEEE-ESCCSCEEEE-EEEEEC---SSCEEEEEEC
T ss_pred EEEEEecCCCcEEEEEEEecc------CCCCceEEEEECCc--eeEEEE-CCcCCcEEEE-EEEEec---CCccEEEEEe
Confidence 568996556899999999876 22444558999997 333322 2211111111 123333 5666777766
Q ss_pred ---cCCCcEEEEEEEeecCCCCCC
Q 037169 93 ---ACGSPIVNGICIKNATNVPES 113 (860)
Q Consensus 93 ---~~g~p~InaIEI~k~~~~~~~ 113 (860)
.-|..+|-.|+|.++..++..
T Consensus 105 ~~g~WG~~~iD~I~l~~a~~~~~~ 128 (140)
T 2bgo_A 105 GSSDWGYMNVHSLKLELLGGLTIR 128 (140)
T ss_dssp CSSSCCCCEEEEEEEEECC-----
T ss_pred cCCCceeEEEEEEEEEcCCCcccc
Confidence 677799999999999888765
No 121
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=62.82 E-value=36 Score=29.66 Aligned_cols=13 Identities=0% Similarity=0.327 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHHH
Q 037169 585 QKVKMMLEKTKQE 597 (860)
Q Consensus 585 ~~lk~~l~~~k~e 597 (860)
+.|+.++..+..+
T Consensus 3 ~eLr~qi~~l~~e 15 (86)
T 3swk_A 3 RELRRQVDQLTND 15 (86)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 4555555554444
No 122
>1q0u_A Bstdead; DEAD protein, RNA binding protein; 1.85A {Geobacillus stearothermophilus} SCOP: c.37.1.19
Probab=62.57 E-value=1.7 Score=43.39 Aligned_cols=26 Identities=35% Similarity=0.538 Sum_probs=20.1
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..+++|.|+ +..++||||||.+.
T Consensus 33 ~~i~~~~~~~~~--lv~a~TGsGKT~~~ 58 (219)
T 1q0u_A 33 RIIPGALRGESM--VGQSQTGTGKTHAY 58 (219)
T ss_dssp HHHHHHHHTCCE--EEECCSSHHHHHHH
T ss_pred HHHHHHhCCCCE--EEECCCCChHHHHH
Confidence 356677888875 56789999999873
No 123
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=62.35 E-value=19 Score=30.52 Aligned_cols=27 Identities=33% Similarity=0.479 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037169 631 EKINELESQLESKTQLCRQLEKQLLQV 657 (860)
Q Consensus 631 ~k~~ele~~l~~~~~~~~~le~~l~~l 657 (860)
..|.+++.++..+...+.+|..+|+++
T Consensus 40 ~~I~eLEk~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 40 ALIDELELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344555555555555555555555443
No 124
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=62.16 E-value=84 Score=36.78 Aligned_cols=29 Identities=24% Similarity=0.343 Sum_probs=19.9
Q ss_pred chhhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 312 ASPLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 312 v~plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
+..++.. +++....|...|.+|+|||+.|
T Consensus 27 al~~L~~-i~~~~~~VaivG~pnvGKStLi 55 (592)
T 1f5n_A 27 ALKILSA-ITQPMVVVAIVGLYRTGKSYLM 55 (592)
T ss_dssp HHHHHHT-CCSBEEEEEEEEBTTSSHHHHH
T ss_pred HHHHHHh-ccCCCcEEEEECCCCCCHHHHH
Confidence 3344443 3566677888999999998764
No 125
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20
Probab=62.14 E-value=2 Score=44.00 Aligned_cols=26 Identities=31% Similarity=0.565 Sum_probs=19.3
Q ss_pred HHHhhCC--ccEEEEeeccCCCCccccc
Q 037169 316 VTSVLDG--YNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 316 V~~~l~G--~N~~IfaYGqTGSGKTyTM 341 (860)
+..++.| ..-+++-||+.|||||+..
T Consensus 48 l~~~~~~iPkkn~ili~GPPGtGKTt~a 75 (212)
T 1tue_A 48 LKSFLKGTPKKNCLVFCGPANTGKSYFG 75 (212)
T ss_dssp HHHHHHTCTTCSEEEEESCGGGCHHHHH
T ss_pred HHHHHhcCCcccEEEEECCCCCCHHHHH
Confidence 4445555 3347999999999999875
No 126
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=61.61 E-value=1e+02 Score=33.90 Aligned_cols=15 Identities=20% Similarity=0.087 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHhhhh
Q 037169 147 CEKRIKELKIQCQLK 161 (860)
Q Consensus 147 ~~~~~~~~~~~~~~~ 161 (860)
+...|++|+..+...
T Consensus 65 ~~~rIe~L~~~L~~~ 79 (390)
T 1deq_A 65 FTSRINKLRDSLFNY 79 (390)
T ss_pred HHHHHHHHHHHHHHH
Confidence 444555555444433
No 127
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=61.60 E-value=2.5 Score=45.54 Aligned_cols=28 Identities=29% Similarity=0.424 Sum_probs=21.7
Q ss_pred hhHHHhhCCccE--EEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNV--CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~--~IfaYGqTGSGKTyTM 341 (860)
.++..+..|... .++-||++|+|||+..
T Consensus 58 ~l~~~~~~~~~~~~~vLl~GppGtGKT~la 87 (368)
T 3uk6_A 58 VVLEMIREGKIAGRAVLIAGQPGTGKTAIA 87 (368)
T ss_dssp HHHHHHHTTCCTTCEEEEEESTTSSHHHHH
T ss_pred HHHHHHHcCCCCCCEEEEECCCCCCHHHHH
Confidence 455566667654 7899999999999876
No 128
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=61.42 E-value=2.3 Score=43.33 Aligned_cols=19 Identities=26% Similarity=0.338 Sum_probs=15.9
Q ss_pred ccEEEEeeccCCCCccccc
Q 037169 323 YNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 323 ~N~~IfaYGqTGSGKTyTM 341 (860)
....|+-||++|+|||+..
T Consensus 38 ~~~~vll~G~~GtGKT~la 56 (262)
T 2qz4_A 38 VPKGALLLGPPGCGKTLLA 56 (262)
T ss_dssp CCCEEEEESCTTSSHHHHH
T ss_pred CCceEEEECCCCCCHHHHH
Confidence 3456899999999999975
No 129
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=61.34 E-value=40 Score=32.01 Aligned_cols=13 Identities=15% Similarity=0.286 Sum_probs=6.4
Q ss_pred hHHHHHHHHHHHH
Q 037169 143 SMAKCEKRIKELK 155 (860)
Q Consensus 143 ~~~~~~~~~~~~~ 155 (860)
..+-+..++.+++
T Consensus 33 vA~~vd~km~ei~ 45 (138)
T 3hnw_A 33 VASYINNKITEFN 45 (138)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 3344555555555
No 130
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=61.33 E-value=2.5 Score=39.64 Aligned_cols=20 Identities=25% Similarity=0.612 Sum_probs=16.1
Q ss_pred CccEEEEeeccCCCCccccc
Q 037169 322 GYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 322 G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..|+-||++|||||+..
T Consensus 22 ~~~~~vll~G~~GtGKt~lA 41 (145)
T 3n70_A 22 ETDIAVWLYGAPGTGRMTGA 41 (145)
T ss_dssp TCCSCEEEESSTTSSHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHH
Confidence 45556889999999999864
No 131
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=61.27 E-value=2.9 Score=45.49 Aligned_cols=26 Identities=35% Similarity=0.607 Sum_probs=20.6
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.| ++..++||||||.+.
T Consensus 66 ~ai~~i~~~~~--~lv~a~TGsGKT~~~ 91 (410)
T 2j0s_A 66 RAIKQIIKGRD--VIAQSQSGTGKTATF 91 (410)
T ss_dssp HHHHHHHTTCC--EEEECCTTSSHHHHH
T ss_pred HHHHHHhCCCC--EEEECCCCCCchHHH
Confidence 35677888988 567789999999764
No 132
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=60.72 E-value=47 Score=28.38 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 037169 147 CEKRIKELKIQCQLKTDECYEAWMSLTAANDQLEKV 182 (860)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 182 (860)
+.+++..|+.+...+.+....+...+...+......
T Consensus 4 ikkKm~~lk~e~d~a~~~~~~~e~~l~~~e~~~~~~ 39 (81)
T 1ic2_A 4 IKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQL 39 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444555555555444444444444444444433333
No 133
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=60.49 E-value=3.2 Score=45.79 Aligned_cols=28 Identities=29% Similarity=0.304 Sum_probs=21.1
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
+.+..+.-.....|.-.|+||||||++|
T Consensus 126 ~~l~~l~~~~g~~i~ivG~~GsGKTTll 153 (372)
T 2ewv_A 126 DKVLELCHRKMGLILVTGPTGSGKSTTI 153 (372)
T ss_dssp SSHHHHTTSSSEEEEEECSSSSSHHHHH
T ss_pred HHHHHHhhcCCCEEEEECCCCCCHHHHH
Confidence 4455554445567888999999999988
No 134
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=60.46 E-value=2.1 Score=43.75 Aligned_cols=15 Identities=33% Similarity=0.581 Sum_probs=14.0
Q ss_pred EEeeccCCCCccccc
Q 037169 327 IFAYGQTGTGKTFTM 341 (860)
Q Consensus 327 IfaYGqTGSGKTyTM 341 (860)
|+-||++|||||+.+
T Consensus 52 ~ll~G~~G~GKTtl~ 66 (254)
T 1ixz_A 52 VLLVGPPGVGKTHLA 66 (254)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 899999999999976
No 135
>3fmp_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 3.19A {Homo sapiens}
Probab=60.41 E-value=3.1 Score=46.67 Aligned_cols=27 Identities=30% Similarity=0.294 Sum_probs=22.0
Q ss_pred hhHHHhhCCccEEEEeeccCCCCcccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFT 340 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyT 340 (860)
..+..++.|.+..++..|+||||||..
T Consensus 121 ~ai~~il~~~~~~~l~~a~TGsGKT~~ 147 (479)
T 3fmp_B 121 NALPLMLAEPPQNLIAQSQSGTGKTAA 147 (479)
T ss_dssp HHHHHHTSBSCCEEEEECCSSSSHHHH
T ss_pred HHHHHHHcCCCCcEEEEcCCCCchhHH
Confidence 356677788667789999999999977
No 136
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=60.34 E-value=1.1e+02 Score=28.39 Aligned_cols=16 Identities=13% Similarity=0.050 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHHHHH
Q 037169 164 ECYEAWMSLTAANDQL 179 (860)
Q Consensus 164 ~~~~~~~~~~~~~~~l 179 (860)
++.++...++.+..+|
T Consensus 37 Ei~elrr~iq~L~~el 52 (129)
T 3tnu_B 37 EISEMNRMIQRLRAEI 52 (129)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333333333333333
No 137
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=60.32 E-value=56 Score=28.28 Aligned_cols=30 Identities=17% Similarity=0.038 Sum_probs=17.2
Q ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 037169 142 KSMAKCEKRIKELKIQCQLKTDECYEAWMS 171 (860)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (860)
...++++.+|...-+.+.+.+-++.++...
T Consensus 6 ElleqLE~KIq~avdtI~lLqmEieELKek 35 (81)
T 2jee_A 6 EVFEKLEAKVQQAIDTITLLQMEIEELKEK 35 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667777766666555555554444443
No 138
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=60.20 E-value=82 Score=27.44 Aligned_cols=25 Identities=28% Similarity=0.288 Sum_probs=14.7
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHh
Q 037169 661 MKGKEEICSNVQRKVKELENKLKEH 685 (860)
Q Consensus 661 ~~~~ee~~~~lq~~~~ele~~l~~~ 685 (860)
....++.|..+...-.+|+..+.+.
T Consensus 58 l~eaEe~~~~L~~~K~eLE~~l~el 82 (89)
T 3bas_A 58 MKQLEDKVEELLSKNYHLENEVARL 82 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566666666666666666544
No 139
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=60.01 E-value=2e+02 Score=32.11 Aligned_cols=10 Identities=40% Similarity=0.478 Sum_probs=5.8
Q ss_pred eEEEeecCCc
Q 037169 471 KLWLVDLAGS 480 (860)
Q Consensus 471 kL~lVDLAGS 480 (860)
.|..+||.|.
T Consensus 238 ~L~~L~l~~N 247 (487)
T 3oja_A 238 NLEHFDLRGN 247 (487)
T ss_dssp TCCEEECTTC
T ss_pred CCCEEEcCCC
Confidence 4555666654
No 140
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=59.91 E-value=3.2 Score=43.47 Aligned_cols=20 Identities=30% Similarity=0.305 Sum_probs=16.2
Q ss_pred CccEEEEeeccCCCCccccc
Q 037169 322 GYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 322 G~N~~IfaYGqTGSGKTyTM 341 (860)
.....|+-||++|+|||+..
T Consensus 65 ~~~~~vll~G~~GtGKT~la 84 (309)
T 3syl_A 65 TPTLHMSFTGNPGTGKTTVA 84 (309)
T ss_dssp CCCCEEEEEECTTSSHHHHH
T ss_pred CCCceEEEECCCCCCHHHHH
Confidence 34446899999999999965
No 141
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=59.61 E-value=3.2 Score=44.90 Aligned_cols=28 Identities=29% Similarity=0.303 Sum_probs=22.0
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.+..++..++||||||.+.
T Consensus 54 ~~i~~~~~~~~~~~lv~apTGsGKT~~~ 81 (412)
T 3fht_A 54 NALPLMLAEPPQNLIAQSQSGTGKTAAF 81 (412)
T ss_dssp HHHHHHHSSSCCCEEEECCTTSCHHHHH
T ss_pred HHHHHHhcCCCCeEEEECCCCchHHHHH
Confidence 4677788885556788899999999873
No 142
>2z0m_A 337AA long hypothetical ATP-dependent RNA helicase DEAD; ATP-binding, hydrolase, nucleotide-binding, RNA binding protein, structural genomics; 1.90A {Sulfolobus tokodaii}
Probab=59.23 E-value=3.4 Score=43.25 Aligned_cols=26 Identities=35% Similarity=0.498 Sum_probs=20.1
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..+++|.++ +..++||||||.+.
T Consensus 23 ~~i~~i~~~~~~--lv~~~TGsGKT~~~ 48 (337)
T 2z0m_A 23 KTIPLMLQGKNV--VVRAKTGSGKTAAY 48 (337)
T ss_dssp HHHHHHHTTCCE--EEECCTTSSHHHHH
T ss_pred HHHHHHhcCCCE--EEEcCCCCcHHHHH
Confidence 356677888874 56789999999865
No 143
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=59.19 E-value=3.1 Score=44.52 Aligned_cols=28 Identities=29% Similarity=0.318 Sum_probs=21.3
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|....++..++||||||.+.
T Consensus 34 ~~i~~~~~~~~~~~lv~a~TGsGKT~~~ 61 (395)
T 3pey_A 34 RALPLLLHNPPRNMIAQSQSGTGKTAAF 61 (395)
T ss_dssp HHHHHHHCSSCCCEEEECCTTSCHHHHH
T ss_pred HHHHHHHcCCCCeEEEECCCCCcHHHHH
Confidence 4667788884445678899999999864
No 144
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=58.94 E-value=2.3 Score=45.20 Aligned_cols=17 Identities=53% Similarity=0.829 Sum_probs=15.0
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..++-||++|+|||+.+
T Consensus 38 ~~lll~G~~GtGKT~la 54 (324)
T 1l8q_A 38 NPIFIYGSVGTGKTHLL 54 (324)
T ss_dssp SSEEEECSSSSSHHHHH
T ss_pred CeEEEECCCCCcHHHHH
Confidence 46888999999999976
No 145
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=58.85 E-value=5.1 Score=45.30 Aligned_cols=43 Identities=28% Similarity=0.397 Sum_probs=32.2
Q ss_pred EEEEeeccCCCCcccccc--------------CC---CCCCCchhhHHHHHHHHHHHhcC
Q 037169 325 VCIFAYGQTGTGKTFTME--------------GT---QQNRGVNYRTLELLFKIAEERKE 367 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM~--------------G~---~~~~GIipRal~~LF~~~~~~~~ 367 (860)
-.|+-|||+|+|||++.. |+ ....|--.+.++.+|........
T Consensus 216 rGvLLyGPPGTGKTllAkAiA~e~~~~f~~v~~s~l~~~~vGese~~ir~lF~~A~~~aP 275 (434)
T 4b4t_M 216 KGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAP 275 (434)
T ss_dssp CEEEEESCTTSSHHHHHHHHHHHHTCEEEEEEGGGGCSSCSSHHHHHHHHHHHHHHHHCS
T ss_pred CeeEEECcCCCCHHHHHHHHHHHhCCCEEEEehhhhhhcccchHHHHHHHHHHHHHhcCC
Confidence 468889999999997752 11 13457788999999998876554
No 146
>1u0j_A DNA replication protein; AAA+ protein, P-loop atpases, helicase; HET: DNA ADP; 2.10A {Adeno-associated virus - 2} SCOP: c.37.1.20 PDB: 1s9h_A
Probab=58.69 E-value=3.8 Score=43.31 Aligned_cols=30 Identities=23% Similarity=0.261 Sum_probs=24.0
Q ss_pred chhhHHHhhCCc---cEEEEeeccCCCCccccc
Q 037169 312 ASPLVTSVLDGY---NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 312 v~plV~~~l~G~---N~~IfaYGqTGSGKTyTM 341 (860)
+...+...++|. .-||+-||+.|+|||+..
T Consensus 89 ~~~~l~~~l~~~~~~~n~~~l~GppgtGKt~~a 121 (267)
T 1u0j_A 89 AASVFLGWATKKFGKRNTIWLFGPATTGKTNIA 121 (267)
T ss_dssp HHHHHHHHHTTCSTTCCEEEEECSTTSSHHHHH
T ss_pred HHHHHHHHHhCCCCCCcEEEEECCCCCCHHHHH
Confidence 345577888887 458999999999999865
No 147
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=58.50 E-value=1.1e+02 Score=34.31 Aligned_cols=53 Identities=11% Similarity=0.059 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchh
Q 037169 203 QAAKLKDVASLYERDKRLWIIAMNELERKILIWKEEHSQLAREAHECASSVPQ 255 (860)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~e~~~~~~~~~~ 255 (860)
..+..+.+..+.+.++..........++++..+++|..++..++++....+.+
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (487)
T 3oja_A 415 IVKRYEEMYVEQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALAS 467 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHh
Confidence 33334444444444444444555555666666777777676666665544433
No 148
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=58.33 E-value=2.9 Score=44.55 Aligned_cols=25 Identities=24% Similarity=0.416 Sum_probs=18.7
Q ss_pred HHhhCCccEEEEeeccCCCCccccc
Q 037169 317 TSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 317 ~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..++.+....|+-||++|+|||+..
T Consensus 38 ~~~~~~~~~~vLl~G~~GtGKT~la 62 (350)
T 1g8p_A 38 LTAVDPGIGGVLVFGDRGTGKSTAV 62 (350)
T ss_dssp HHHHCGGGCCEEEECCGGGCTTHHH
T ss_pred HHhhCCCCceEEEECCCCccHHHHH
Confidence 3344444556899999999999975
No 149
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=58.31 E-value=3.2 Score=44.98 Aligned_cols=26 Identities=31% Similarity=0.524 Sum_probs=20.3
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.+ ++..++||||||.+.
T Consensus 50 ~~i~~i~~~~~--~li~a~TGsGKT~~~ 75 (400)
T 1s2m_A 50 EAIPVAITGRD--ILARAKNGTGKTAAF 75 (400)
T ss_dssp HHHHHHHHTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHHhcCCC--EEEECCCCcHHHHHH
Confidence 45667778887 567789999999764
No 150
>2fz4_A DNA repair protein RAD25; RECA-like domain, DNA damage recognition domain, DNA binding; HET: DNA; 2.40A {Archaeoglobus fulgidus} SCOP: c.37.1.19
Probab=58.21 E-value=3.3 Score=42.34 Aligned_cols=26 Identities=23% Similarity=0.072 Sum_probs=20.1
Q ss_pred hHHHhhCCccEEEEeeccCCCCcccccc
Q 037169 315 LVTSVLDGYNVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 315 lV~~~l~G~N~~IfaYGqTGSGKTyTM~ 342 (860)
.+..++++.+ ++.+|+||+|||++..
T Consensus 101 ai~~~~~~~~--~ll~~~tG~GKT~~a~ 126 (237)
T 2fz4_A 101 ALERWLVDKR--GCIVLPTGSGKTHVAM 126 (237)
T ss_dssp HHHHHTTTSE--EEEEESSSTTHHHHHH
T ss_pred HHHHHHhCCC--EEEEeCCCCCHHHHHH
Confidence 5666778866 5667899999999863
No 151
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae}
Probab=58.13 E-value=2.5 Score=39.52 Aligned_cols=27 Identities=15% Similarity=0.151 Sum_probs=18.1
Q ss_pred hHHHhhCCccEEEEeeccCCCCcccccc
Q 037169 315 LVTSVLDGYNVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 315 lV~~~l~G~N~~IfaYGqTGSGKTyTM~ 342 (860)
.+..+.. .+..|+-||++|+|||+...
T Consensus 19 ~~~~~~~-~~~~vll~G~~GtGKt~lA~ 45 (143)
T 3co5_A 19 EVEAAAK-RTSPVFLTGEAGSPFETVAR 45 (143)
T ss_dssp HHHHHHT-CSSCEEEEEETTCCHHHHHG
T ss_pred HHHHHhC-CCCcEEEECCCCccHHHHHH
Confidence 3344333 33447779999999998764
No 152
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=56.88 E-value=3.9 Score=44.43 Aligned_cols=26 Identities=27% Similarity=0.429 Sum_probs=20.2
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.|+ +..++||||||.++
T Consensus 44 ~~i~~i~~~~~~--lv~a~TGsGKT~~~ 69 (417)
T 2i4i_A 44 HAIPIIKEKRDL--MACAQTGSGKTAAF 69 (417)
T ss_dssp HHHHHHHTTCCE--EEECCTTSCHHHHH
T ss_pred HHHHHHccCCCE--EEEcCCCCHHHHHH
Confidence 356677889885 56789999999864
No 153
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=56.41 E-value=3 Score=42.70 Aligned_cols=18 Identities=33% Similarity=0.493 Sum_probs=15.2
Q ss_pred cEEEEeeccCCCCccccc
Q 037169 324 NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM 341 (860)
...|+-||++|||||+.+
T Consensus 45 ~~~vll~G~~GtGKT~la 62 (257)
T 1lv7_A 45 PKGVLMVGPPGTGKTLLA 62 (257)
T ss_dssp CCEEEEECCTTSCHHHHH
T ss_pred CCeEEEECcCCCCHHHHH
Confidence 345899999999999876
No 154
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=56.37 E-value=2.9 Score=43.27 Aligned_cols=19 Identities=42% Similarity=0.576 Sum_probs=15.6
Q ss_pred ccEEEEeeccCCCCccccc
Q 037169 323 YNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 323 ~N~~IfaYGqTGSGKTyTM 341 (860)
....|+-||++|+|||+.+
T Consensus 50 ~~~~~ll~G~~GtGKT~la 68 (285)
T 3h4m_A 50 PPKGILLYGPPGTGKTLLA 68 (285)
T ss_dssp CCSEEEEESSSSSSHHHHH
T ss_pred CCCeEEEECCCCCcHHHHH
Confidence 3456888999999999865
No 155
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=56.20 E-value=1.2e+02 Score=27.81 Aligned_cols=44 Identities=11% Similarity=0.246 Sum_probs=28.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 037169 688 SENVTALHHKVRELENRLKARTQEFEVHSGMLQQKIAELEEKLRKKEE 735 (860)
Q Consensus 688 ~~~~~~le~ki~~lE~kl~~~~~~~e~~~~~lq~qi~eLe~kl~~Qee 735 (860)
.+++..+.++++.++..++.+..... .++.++..+++.+++..+
T Consensus 87 ~eA~~~l~~r~~~l~~~~~~l~~~l~----~l~~~i~~~~~~l~~~~~ 130 (133)
T 1fxk_C 87 EDAMESIKSQKNELESTLQKMGENLR----AITDIMMKLSPQAEELLA 130 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhh
Confidence 44556677777777777777666544 566667777776665543
No 156
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=56.11 E-value=3.2 Score=44.46 Aligned_cols=20 Identities=40% Similarity=0.453 Sum_probs=17.0
Q ss_pred CccEEEEeeccCCCCccccc
Q 037169 322 GYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 322 G~N~~IfaYGqTGSGKTyTM 341 (860)
+...+++-||++|+|||+++
T Consensus 42 ~~~~~vll~G~~G~GKT~l~ 61 (387)
T 2v1u_A 42 EKPSNALLYGLTGTGKTAVA 61 (387)
T ss_dssp CCCCCEEECBCTTSSHHHHH
T ss_pred CCCCcEEEECCCCCCHHHHH
Confidence 45568899999999999976
No 157
>1rif_A DAR protein, DNA helicase UVSW; bacteriophage, RECG, SF2, DNA binding protein; HET: DNA; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.23
Probab=55.98 E-value=2.9 Score=43.55 Aligned_cols=27 Identities=15% Similarity=0.059 Sum_probs=19.8
Q ss_pred hhHHHhhCCccEEEEeeccCCCCcccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM~ 342 (860)
..+..++.|.++.| .++||||||.+..
T Consensus 120 ~ai~~~l~~~~~ll--~~~tGsGKT~~~~ 146 (282)
T 1rif_A 120 DAVFEGLVNRRRIL--NLPTSAGRSLIQA 146 (282)
T ss_dssp HHHHHHHHHSEEEE--CCCTTSCHHHHHH
T ss_pred HHHHHHHhcCCeEE--EcCCCCCcHHHHH
Confidence 35666777766543 9999999999863
No 158
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=54.76 E-value=3 Score=43.39 Aligned_cols=18 Identities=39% Similarity=0.423 Sum_probs=15.0
Q ss_pred cEEEEeeccCCCCccccc
Q 037169 324 NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM 341 (860)
...|+-||++|+|||++.
T Consensus 50 ~~~vll~G~~GtGKT~la 67 (310)
T 1ofh_A 50 PKNILMIGPTGVGKTEIA 67 (310)
T ss_dssp CCCEEEECCTTSSHHHHH
T ss_pred CceEEEECCCCCCHHHHH
Confidence 346788999999999975
No 159
>2jlq_A Serine protease subunit NS3; ribonucleoprotein, nucleotide-binding, viral nucleoprotein, endoplasmic reticulum, helicase, hydrolase; 1.67A {Dengue virus 4} PDB: 2jly_A* 2jls_A* 2jlu_A 2jlv_A* 2jlw_A 2jlx_A* 2jlz_A* 2jlr_A* 2bmf_A 2bhr_A
Probab=54.69 E-value=3.6 Score=46.26 Aligned_cols=26 Identities=15% Similarity=0.160 Sum_probs=20.6
Q ss_pred hhHHHhhCCccEEEEeeccCCCCcccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFT 340 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyT 340 (860)
.++..++.|.+. ++..|+||||||..
T Consensus 10 ~~i~~~l~~~~~-~lv~a~TGsGKT~~ 35 (451)
T 2jlq_A 10 EVDEDIFRKKRL-TIMDLHPGAGKTKR 35 (451)
T ss_dssp CCCGGGGSTTCE-EEECCCTTSSCCTT
T ss_pred HHHHHHHhcCCe-EEEECCCCCCHhhH
Confidence 356678888775 56779999999997
No 160
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=54.58 E-value=4.2 Score=43.81 Aligned_cols=30 Identities=30% Similarity=0.370 Sum_probs=21.5
Q ss_pred chhhHHHhhCCc-cEEEEeeccCCCCccccc
Q 037169 312 ASPLVTSVLDGY-NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 312 v~plV~~~l~G~-N~~IfaYGqTGSGKTyTM 341 (860)
+..++..++.|. ..+|+-||++|+|||+++
T Consensus 32 l~~~l~~~~~~~~~~~vll~G~~G~GKT~la 62 (384)
T 2qby_B 32 AAIAIRYFVKNEVKFSNLFLGLTGTGKTFVS 62 (384)
T ss_dssp HHHHHHHHHTTCCCCEEEEEECTTSSHHHHH
T ss_pred HHHHHHHHHcCCCCCcEEEECCCCCCHHHHH
Confidence 334555555543 458999999999999965
No 161
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=54.47 E-value=8.5 Score=45.03 Aligned_cols=107 Identities=11% Similarity=0.276 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHhhh-----hhhHHHHHHHHHHHHHHH
Q 037169 631 EKINELESQLESKTQLCRQLEKQLLQVSEGMKGKEEICSNVQRKVKELENKLKEHDQ-----SENVTALHHKVRELENRL 705 (860)
Q Consensus 631 ~k~~ele~~l~~~~~~~~~le~~l~~l~~~~~~~ee~~~~lq~~~~ele~~l~~~~q-----~~~~~~le~ki~~lE~kl 705 (860)
.++..++++.......+.+.+.....+.++.+..++....|..+..+.+.....+.. .+....|..++.+.+...
T Consensus 342 ~~~~~~~~~~~~~~~~l~~~~~~~~~l~e~~~~~~~e~~~l~~~~~~~e~~~~~l~~~~~~~~~e~~~l~~~~~~~~~~~ 421 (575)
T 2i1j_A 342 DRLRQMQEEMERSQANLLEAQDMILRLEEQLRQLQAAKEELEQRQNELQAMMQRLEETKNMEAAERQKLEDEIRAKQEEV 421 (575)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC---------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444444444444444444444444444433332221 122234556666665554
Q ss_pred HHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHh
Q 037169 706 KARTQEF---EVHSGMLQQKIAELEEKLRKKEEYA 737 (860)
Q Consensus 706 ~~~~~~~---e~~~~~lq~qi~eLe~kl~~Qeeq~ 737 (860)
..+.++. +.+...|+.++..-++.+.+.++.+
T Consensus 422 ~~~~~~~~~~~~e~~~~~~~~~~a~~~~~~~~~~l 456 (575)
T 2i1j_A 422 SRIQQEVELKDSETRRLQEEVEDARRKQDEAAAAL 456 (575)
T ss_dssp --------------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4333332 2245567777666666666655555
No 162
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=54.43 E-value=3.4 Score=43.75 Aligned_cols=17 Identities=29% Similarity=0.614 Sum_probs=14.2
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-||++|+|||+..
T Consensus 37 ~~lLl~GppGtGKT~la 53 (293)
T 3t15_A 37 LILGIWGGKGQGKSFQC 53 (293)
T ss_dssp SEEEEEECTTSCHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 35778999999999965
No 163
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=54.32 E-value=3.3 Score=43.83 Aligned_cols=18 Identities=33% Similarity=0.606 Sum_probs=15.3
Q ss_pred cEEEEeeccCCCCccccc
Q 037169 324 NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM 341 (860)
...|+-||++|+|||+.+
T Consensus 49 ~~~vLL~Gp~GtGKT~la 66 (301)
T 3cf0_A 49 SKGVLFYGPPGCGKTLLA 66 (301)
T ss_dssp CSEEEEECSSSSSHHHHH
T ss_pred CceEEEECCCCcCHHHHH
Confidence 456889999999999875
No 164
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=53.98 E-value=3.5 Score=40.38 Aligned_cols=17 Identities=29% Similarity=0.331 Sum_probs=14.9
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..++-||++|+|||+.+
T Consensus 46 ~~~ll~G~~G~GKT~l~ 62 (250)
T 1njg_A 46 HAYLFSGTRGVGKTSIA 62 (250)
T ss_dssp SEEEEECSTTSCHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 47889999999999875
No 165
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=53.92 E-value=3.7 Score=43.66 Aligned_cols=28 Identities=32% Similarity=0.422 Sum_probs=19.5
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
.+...+..|....++-||++|+|||+++
T Consensus 48 ~l~~~l~~~~~~~~ll~G~~G~GKT~la 75 (353)
T 1sxj_D 48 VLKKTLKSANLPHMLFYGPPGTGKTSTI 75 (353)
T ss_dssp HHHHHTTCTTCCCEEEECSTTSSHHHHH
T ss_pred HHHHHHhcCCCCEEEEECCCCCCHHHHH
Confidence 3444444553334888999999999976
No 166
>3h1t_A Type I site-specific restriction-modification system, R (restriction) subunit; hydrolase, restriction enzyme HSDR, ATP-binding; 2.30A {Vibrio vulnificus}
Probab=53.90 E-value=4.3 Score=47.01 Aligned_cols=29 Identities=38% Similarity=0.417 Sum_probs=20.3
Q ss_pred hhhHHHhhCCccEEEEeeccCCCCcccccc
Q 037169 313 SPLVTSVLDGYNVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 313 ~plV~~~l~G~N~~IfaYGqTGSGKTyTM~ 342 (860)
..++..+..|.+.++++ ++||||||.++.
T Consensus 188 ~~~~~~~~~~~~~~ll~-~~TGsGKT~~~~ 216 (590)
T 3h1t_A 188 NRAVQSVLQGKKRSLIT-MATGTGKTVVAF 216 (590)
T ss_dssp HHHHHHHHTTCSEEEEE-ECTTSCHHHHHH
T ss_pred HHHHHHHhcCCCceEEE-ecCCCChHHHHH
Confidence 34445555677665555 999999999863
No 167
>3oiy_A Reverse gyrase helicase domain; topoisomerase, DNA supercoiling, archaea, isomeras; 2.35A {Thermotoga maritima} PDB: 3p4y_A 3p4x_A*
Probab=53.87 E-value=4.5 Score=44.33 Aligned_cols=26 Identities=23% Similarity=0.245 Sum_probs=20.6
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..+++|.| ++..++||||||...
T Consensus 28 ~~i~~i~~~~~--~lv~apTGsGKT~~~ 53 (414)
T 3oiy_A 28 LWAKRIVQGKS--FTMVAPTGVGKTTFG 53 (414)
T ss_dssp HHHHHHTTTCC--EECCSCSSSSHHHHH
T ss_pred HHHHHHhcCCC--EEEEeCCCCCHHHHH
Confidence 45677888986 568899999999843
No 168
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=53.41 E-value=3.3 Score=44.53 Aligned_cols=30 Identities=30% Similarity=0.309 Sum_probs=21.3
Q ss_pred chhhHHHhhCCcc-E--EEEeeccCCCCccccc
Q 037169 312 ASPLVTSVLDGYN-V--CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 312 v~plV~~~l~G~N-~--~IfaYGqTGSGKTyTM 341 (860)
+...+..++.|.. . +++-||++|+|||+++
T Consensus 29 l~~~l~~~~~~~~~~~~~~li~G~~G~GKTtl~ 61 (389)
T 1fnn_A 29 LDILLGNWLRNPGHHYPRATLLGRPGTGKTVTL 61 (389)
T ss_dssp HHHHHHHHHHSTTSSCCEEEEECCTTSSHHHHH
T ss_pred HHHHHHHHHcCCCCCCCeEEEECCCCCCHHHHH
Confidence 3445555555543 3 6889999999999976
No 169
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=53.13 E-value=3.6 Score=42.92 Aligned_cols=18 Identities=28% Similarity=0.567 Sum_probs=15.6
Q ss_pred cEEEEeeccCCCCccccc
Q 037169 324 NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM 341 (860)
...|+-||++|+|||+.+
T Consensus 54 ~~~vll~Gp~GtGKT~la 71 (297)
T 3b9p_A 54 AKGLLLFGPPGNGKTLLA 71 (297)
T ss_dssp CSEEEEESSSSSCHHHHH
T ss_pred CCeEEEECcCCCCHHHHH
Confidence 457899999999999865
No 170
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=53.05 E-value=1.5e+02 Score=28.58 Aligned_cols=44 Identities=11% Similarity=-0.023 Sum_probs=19.5
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 037169 143 SMAKCEKRIKELKIQCQLKTDECYEAWMSLTAANDQLEKVRMGL 186 (860)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 186 (860)
.|..+++.+..++.++.....++.+....++..+.++..+..++
T Consensus 69 ~I~~L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~ 112 (152)
T 3a7p_A 69 TLAILQKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIEN 112 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444444444444444444444444444444
No 171
>3fho_A ATP-dependent RNA helicase DBP5; mRNA export, ATPase, translation termination, binding, hydrolase, membrane, mRNA transport; 2.80A {Schizosaccharomyces pombe}
Probab=52.86 E-value=4.8 Score=45.88 Aligned_cols=28 Identities=25% Similarity=0.300 Sum_probs=21.3
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.+-.++..++||||||.+.
T Consensus 148 ~ai~~i~~~~~~~~ll~apTGsGKT~~~ 175 (508)
T 3fho_A 148 KALPLLLSNPPRNMIGQSQSGTGKTAAF 175 (508)
T ss_dssp SSHHHHHCSSCCCEEEECCSSTTSHHHH
T ss_pred HHHHHHHcCCCCCEEEECCCCccHHHHH
Confidence 3467778884455678899999999873
No 172
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=52.75 E-value=3.4 Score=42.99 Aligned_cols=15 Identities=33% Similarity=0.581 Sum_probs=14.0
Q ss_pred EEeeccCCCCccccc
Q 037169 327 IFAYGQTGTGKTFTM 341 (860)
Q Consensus 327 IfaYGqTGSGKTyTM 341 (860)
|+-||++|||||+.+
T Consensus 76 vll~Gp~GtGKTtl~ 90 (278)
T 1iy2_A 76 VLLVGPPGVGKTHLA 90 (278)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCcChHHHHH
Confidence 899999999999976
No 173
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=52.34 E-value=5 Score=43.07 Aligned_cols=26 Identities=19% Similarity=0.436 Sum_probs=20.2
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.+ ++..++||||||.+.
T Consensus 37 ~~i~~~~~~~~--~lv~a~TGsGKT~~~ 62 (391)
T 1xti_A 37 ECIPQAILGMD--VLCQAKSGMGKTAVF 62 (391)
T ss_dssp HHHHHHTTTCC--EEEECSSCSSHHHHH
T ss_pred HHHHHHhcCCc--EEEECCCCCcHHHHH
Confidence 45677888877 456689999999875
No 174
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=52.25 E-value=4.6 Score=46.58 Aligned_cols=21 Identities=29% Similarity=0.490 Sum_probs=16.7
Q ss_pred hCCccEEEEeeccCCCCcccccc
Q 037169 320 LDGYNVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 320 l~G~N~~IfaYGqTGSGKTyTM~ 342 (860)
-.|.+ |.-.|+||||||+||.
T Consensus 258 ~~g~~--i~I~GptGSGKTTlL~ 278 (511)
T 2oap_1 258 EHKFS--AIVVGETASGKTTTLN 278 (511)
T ss_dssp HTTCC--EEEEESTTSSHHHHHH
T ss_pred hCCCE--EEEECCCCCCHHHHHH
Confidence 35766 5678999999999873
No 175
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=52.03 E-value=3.5 Score=46.40 Aligned_cols=17 Identities=41% Similarity=0.708 Sum_probs=15.1
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..+|-||++|+|||+.+
T Consensus 131 ~~lll~Gp~G~GKTtLa 147 (440)
T 2z4s_A 131 NPLFIYGGVGLGKTHLL 147 (440)
T ss_dssp CCEEEECSSSSSHHHHH
T ss_pred CeEEEECCCCCCHHHHH
Confidence 46888999999999987
No 176
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=51.92 E-value=2.4 Score=43.56 Aligned_cols=17 Identities=35% Similarity=0.530 Sum_probs=14.7
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-||++|+|||+.+
T Consensus 45 ~~vll~G~~GtGKT~la 61 (268)
T 2r62_A 45 KGVLLVGPPGTGKTLLA 61 (268)
T ss_dssp SCCCCBCSSCSSHHHHH
T ss_pred ceEEEECCCCCcHHHHH
Confidence 34889999999999976
No 177
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=51.27 E-value=4 Score=43.57 Aligned_cols=17 Identities=41% Similarity=0.776 Sum_probs=14.8
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-||++|+|||+..
T Consensus 52 ~~vLl~GppGtGKT~la 68 (322)
T 3eie_A 52 SGILLYGPPGTGKSYLA 68 (322)
T ss_dssp CEEEEECSSSSCHHHHH
T ss_pred CeEEEECCCCCcHHHHH
Confidence 46889999999999865
No 178
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=51.02 E-value=4.7 Score=43.20 Aligned_cols=25 Identities=40% Similarity=0.510 Sum_probs=17.7
Q ss_pred HHhhCCccEEEEeeccCCCCccccc
Q 037169 317 TSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 317 ~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+-.|.-..++-||++|+|||+++
T Consensus 39 ~~i~~g~~~~~ll~Gp~G~GKTtla 63 (340)
T 1sxj_C 39 KFVDEGKLPHLLFYGPPGTGKTSTI 63 (340)
T ss_dssp HHHHTTCCCCEEEECSSSSSHHHHH
T ss_pred HHHhcCCCceEEEECCCCCCHHHHH
Confidence 3344454333777999999999987
No 179
>4b3f_X DNA-binding protein smubp-2; hydrolase, helicase; 2.50A {Homo sapiens} PDB: 4b3g_A
Probab=50.98 E-value=5 Score=47.36 Aligned_cols=28 Identities=32% Similarity=0.337 Sum_probs=20.0
Q ss_pred hhHHHhhCCccEEEEeeccCCCCcccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM~ 342 (860)
..|..++.....+ +-.||.|||||+|+.
T Consensus 196 ~AV~~al~~~~~~-lI~GPPGTGKT~ti~ 223 (646)
T 4b3f_X 196 EAVLFALSQKELA-IIHGPPGTGKTTTVV 223 (646)
T ss_dssp HHHHHHHHCSSEE-EEECCTTSCHHHHHH
T ss_pred HHHHHHhcCCCce-EEECCCCCCHHHHHH
Confidence 3566666544444 567999999999974
No 180
>2db3_A ATP-dependent RNA helicase VASA; DEAD-BOX, protein-RNA complex, ATPase, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.20A {Drosophila melanogaster}
Probab=50.77 E-value=5.5 Score=44.34 Aligned_cols=26 Identities=31% Similarity=0.485 Sum_probs=20.0
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.+ +++.++||||||.+.
T Consensus 85 ~ai~~i~~g~d--~i~~a~TGsGKT~a~ 110 (434)
T 2db3_A 85 CSIPVISSGRD--LMACAQTGSGKTAAF 110 (434)
T ss_dssp HHHHHHHTTCC--EEEECCTTSSHHHHH
T ss_pred HHHHHHhcCCC--EEEECCCCCCchHHH
Confidence 35566788987 467789999999864
No 181
>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, HE hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A* 3sqx_A* 4db2_A 4db4_A
Probab=50.67 E-value=6.6 Score=44.92 Aligned_cols=27 Identities=33% Similarity=0.522 Sum_probs=21.2
Q ss_pred hhHHHhhCCccEEEEeeccCCCCcccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFT 340 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyT 340 (860)
..+..++.|.+--+++.++||||||.+
T Consensus 101 ~~i~~~l~~~~~~~lv~apTGsGKTl~ 127 (563)
T 3i5x_A 101 KTIKPILSSEDHDVIARAKTGTGKTFA 127 (563)
T ss_dssp HHHHHHHSSSSEEEEEECCTTSCHHHH
T ss_pred HHHHHHhcCCCCeEEEECCCCCCccHH
Confidence 466677766556678899999999986
No 182
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=50.55 E-value=5.2 Score=45.08 Aligned_cols=30 Identities=23% Similarity=0.257 Sum_probs=21.8
Q ss_pred chhhHHHhhCCcc--EEEEeeccCCCCccccc
Q 037169 312 ASPLVTSVLDGYN--VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 312 v~plV~~~l~G~N--~~IfaYGqTGSGKTyTM 341 (860)
+..++..+..|.. ..|+-||++|+|||+..
T Consensus 49 l~~~~~~~~~~~~~~~~iLl~GppGtGKT~la 80 (456)
T 2c9o_A 49 CGVIVELIKSKKMAGRAVLLAGPPGTGKTALA 80 (456)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSSHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEEEECCCcCCHHHHH
Confidence 3455666666653 35777999999999875
No 183
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=50.28 E-value=1.7e+02 Score=27.77 Aligned_cols=10 Identities=20% Similarity=0.119 Sum_probs=4.0
Q ss_pred HHHHHHHHHH
Q 037169 719 LQQKIAELEE 728 (860)
Q Consensus 719 lq~qi~eLe~ 728 (860)
...++..++.
T Consensus 143 ~~~k~~~~e~ 152 (155)
T 2oto_A 143 DYNRANVLEK 152 (155)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 3334444433
No 184
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=50.19 E-value=4.3 Score=43.59 Aligned_cols=17 Identities=35% Similarity=0.704 Sum_probs=14.7
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-||++|+|||+..
T Consensus 46 ~~iLL~GppGtGKT~la 62 (322)
T 1xwi_A 46 RGILLFGPPGTGKSYLA 62 (322)
T ss_dssp SEEEEESSSSSCHHHHH
T ss_pred ceEEEECCCCccHHHHH
Confidence 46888999999999875
No 185
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=48.97 E-value=10 Score=42.79 Aligned_cols=44 Identities=34% Similarity=0.503 Sum_probs=33.1
Q ss_pred cEEEEeeccCCCCcccccc--------------CC---CCCCCchhhHHHHHHHHHHHhcC
Q 037169 324 NVCIFAYGQTGTGKTFTME--------------GT---QQNRGVNYRTLELLFKIAEERKE 367 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM~--------------G~---~~~~GIipRal~~LF~~~~~~~~ 367 (860)
.-.|+-||+.|+|||.+.- |+ ....|--.+.++.+|........
T Consensus 216 prGvLLyGPPGTGKTlLAkAiA~e~~~~fi~v~~s~l~sk~vGesek~ir~lF~~Ar~~aP 276 (437)
T 4b4t_I 216 PKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAP 276 (437)
T ss_dssp CSEEEEESSTTTTHHHHHHHHHHHHTCEEEEEESGGGCCSSSSHHHHHHHHHHHHHHHTCS
T ss_pred CCCCceECCCCchHHHHHHHHHHHhCCCEEEEEHHHhhhccCchHHHHHHHHHHHHHhcCC
Confidence 3569999999999997652 22 13457788999999998876544
No 186
>2cdp_A Beta-agarase 1; carbohydrate-binding module, hydrolase; HET: GAL AAL; 1.59A {Saccharophagus degradans} PDB: 2cdo_A*
Probab=48.92 E-value=1.4e+02 Score=28.43 Aligned_cols=84 Identities=12% Similarity=0.110 Sum_probs=48.2
Q ss_pred ceEEEeeCCCCcEEEEEEeeecccCCCCCcceEEEEEECCE---EEeeccchhhccCCCcceEEEEE-EEeeCCCce--E
Q 037169 13 FSYRIGNLSPGDYLVDLHFAEIVNANGPKGMRVFDVFMQEE---KVLLEIDIYSIVGANKPLQVVDV-RVSVGMDEV--L 86 (860)
Q Consensus 13 ~sY~f~~v~~G~Y~V~LhFaEi~~~~~~~g~RvFdV~ing~---~vl~~fDI~~~~G~~~a~~~~~~-~V~~~~~g~--L 86 (860)
..|.+....+|.|.|.+..|-.. +...+.|.|+|. .++....+- ..|... +..... .|.. ..|. |
T Consensus 69 l~y~V~v~~aG~Y~i~~rvas~~------~g~~i~l~vdg~~~~~~~g~~~vp-~tGW~~-w~t~t~~~v~L-~aG~htL 139 (160)
T 2cdp_A 69 ADYTIAVAQAGNYTISYQAGSGV------TGGSIEFLVNENGSWASKTVTAVP-NQGWDN-FQPLNGGSVYL-SAGTHQV 139 (160)
T ss_dssp EEEEEEESSCEEEEEEEEEEBSS------SSCEEEEEEECSSSEEEEEEEECC-BSCTTC-CEEEEEEEEEE-CSEEEEE
T ss_pred EEEEEEcCCCcEEEEEEEEEcCC------CCceEEEEECCCCCceeeeEEEcC-CCCCce-eEEeeeeEEEe-CCCeEEE
Confidence 56888544589999999998632 224688889885 455555543 334433 222222 3332 1555 5
Q ss_pred EEEEEccC-CCcEEEEEEEe
Q 037169 87 LIRFDGAC-GSPIVNGICIK 105 (860)
Q Consensus 87 ~I~F~~~~-g~p~InaIEI~ 105 (860)
.|.|.+.. +..-||-|++.
T Consensus 140 ~l~~~g~~~~~~Nld~~~f~ 159 (160)
T 2cdp_A 140 RLHGAGSNNWQWNLDKFTLS 159 (160)
T ss_dssp EEEECSSSSBCCEEEEEEEE
T ss_pred EEEEECCCCCcEEEEEEEEE
Confidence 55554432 24577777765
No 187
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=48.81 E-value=7.7 Score=45.42 Aligned_cols=27 Identities=22% Similarity=0.388 Sum_probs=22.1
Q ss_pred hhhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 313 SPLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 313 ~plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+|..++.|.+ +++.++||||||.+.
T Consensus 50 ~~~i~~il~g~d--~lv~~pTGsGKTl~~ 76 (591)
T 2v1x_A 50 LETINVTMAGKE--VFLVMPTGGGKSLCY 76 (591)
T ss_dssp HHHHHHHHTTCC--EEEECCTTSCTTHHH
T ss_pred HHHHHHHHcCCC--EEEEECCCChHHHHH
Confidence 357888999998 567889999999864
No 188
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=48.58 E-value=58 Score=28.07 Aligned_cols=44 Identities=16% Similarity=0.266 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 037169 206 KLKDVASLYERDKRLWIIAMNELERKILIWKEEHSQLAREAHEC 249 (860)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~e~~~~ 249 (860)
.|+++...++...+.+...+..++..+..++.+..+...|.+..
T Consensus 16 ~l~e~e~~~~~~~~~~q~~i~~lE~eL~~~r~e~~~q~~EYq~L 59 (84)
T 1gk4_A 16 QMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDL 59 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566677777777777788888888888888877766666654
No 189
>4a2p_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.00A {Anas platyrhynchos} PDB: 4a36_A*
Probab=48.48 E-value=6.6 Score=44.37 Aligned_cols=26 Identities=35% Similarity=0.603 Sum_probs=20.6
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.|+ +..++||||||.+.
T Consensus 14 ~~i~~~~~~~~~--l~~~~tGsGKT~~~ 39 (556)
T 4a2p_A 14 ELAQPAINGKNA--LICAPTGSGKTFVS 39 (556)
T ss_dssp HHHHHHHTTCCE--EEECCTTSCHHHHH
T ss_pred HHHHHHHcCCCE--EEEcCCCChHHHHH
Confidence 457778889884 56789999999874
No 190
>1fuu_A Yeast initiation factor 4A; IF4A, helicase, DEAD-box protein, translation; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 2vso_A* 2vsx_A*
Probab=48.31 E-value=3.7 Score=44.08 Aligned_cols=26 Identities=38% Similarity=0.604 Sum_probs=20.2
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.++ +..++||||||.+.
T Consensus 50 ~~i~~i~~~~~~--lv~~~TGsGKT~~~ 75 (394)
T 1fuu_A 50 RAIMPIIEGHDV--LAQAQSGTGKTGTF 75 (394)
T ss_dssp HHHHHHHHTCCE--EECCCSSHHHHHHH
T ss_pred HHHHHHhCCCCE--EEECCCCChHHHHH
Confidence 456677888774 56789999999874
No 191
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=48.25 E-value=6.3 Score=39.39 Aligned_cols=30 Identities=27% Similarity=0.297 Sum_probs=23.3
Q ss_pred chhhHHHhhCC---ccEEEEeeccCCCCccccc
Q 037169 312 ASPLVTSVLDG---YNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 312 v~plV~~~l~G---~N~~IfaYGqTGSGKTyTM 341 (860)
.-|-++.++.| ....+.-+|++|||||+.+
T Consensus 9 G~~~LD~~l~ggi~~G~~~~i~G~~GsGKTtl~ 41 (243)
T 1n0w_A 9 GSKELDKLLQGGIETGSITEMFGEFRTGKTQIC 41 (243)
T ss_dssp SCHHHHHHTTTSEETTSEEEEECCTTSSHHHHH
T ss_pred CChHHHHhhcCCCcCCeEEEEECCCCCcHHHHH
Confidence 45678888864 3456788999999999976
No 192
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=47.97 E-value=52 Score=29.17 Aligned_cols=71 Identities=11% Similarity=0.149 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHH-HHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 037169 586 KVKMMLEKTKQEVGSKDDVIQKLEENF-QNLEVKAKGNVQLCKNQQEKINELESQLESKTQLCRQLEKQLLQVSE 659 (860)
Q Consensus 586 ~lk~~l~~~k~e~~~~~~~i~~le~~~-~~l~~~~~~~~~~~~~~~~k~~ele~~l~~~~~~~~~le~~l~~l~~ 659 (860)
++.++++.+|+|.............+- .+++.++....+.....+.++-+|+..- .+....+|++|..|+.
T Consensus 11 Rl~ELLD~ir~Efe~~~~e~~~~k~q~~~eyE~ki~~Qi~Emq~Ir~tvyeLE~~h---~kmKq~YEeEI~rLr~ 82 (92)
T 3vp9_A 11 KLNELLDAIRQEFLQVSQEANTYRLQNQKDYDFKMNQQLAEMQQIRNTVYERELTH---RKMKDAYEEEIKHLKL 82 (92)
T ss_dssp ------CCTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 566667777777766544443333333 2555555555555555555565555432 2444555555555443
No 193
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=47.83 E-value=4.6 Score=41.47 Aligned_cols=19 Identities=26% Similarity=0.502 Sum_probs=15.6
Q ss_pred ccEEEEeeccCCCCccccc
Q 037169 323 YNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 323 ~N~~IfaYGqTGSGKTyTM 341 (860)
.+..|+-||++|+|||+..
T Consensus 28 ~~~~vll~G~~GtGKt~la 46 (265)
T 2bjv_A 28 LDKPVLIIGERGTGKELIA 46 (265)
T ss_dssp SCSCEEEECCTTSCHHHHH
T ss_pred CCCCEEEECCCCCcHHHHH
Confidence 3456788999999999865
No 194
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=47.74 E-value=8.7 Score=43.75 Aligned_cols=44 Identities=36% Similarity=0.574 Sum_probs=32.4
Q ss_pred cEEEEeeccCCCCcccccc--------------CC---CCCCCchhhHHHHHHHHHHHhcC
Q 037169 324 NVCIFAYGQTGTGKTFTME--------------GT---QQNRGVNYRTLELLFKIAEERKE 367 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM~--------------G~---~~~~GIipRal~~LF~~~~~~~~ 367 (860)
--.|+-||+.|+|||++.- |+ ..-.|--.+.++.+|........
T Consensus 243 prGILLyGPPGTGKTlLAkAiA~e~~~~fi~vs~s~L~sk~vGesek~ir~lF~~Ar~~aP 303 (467)
T 4b4t_H 243 PKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKA 303 (467)
T ss_dssp CSEEEECSCTTSSHHHHHHHHHHHHTCEEEEEEGGGGCCCSSSHHHHHHHHHHHHHHHTCS
T ss_pred CCceEeeCCCCCcHHHHHHHHHhccCCCeEEEEhHHhhcccCCHHHHHHHHHHHHHHhcCC
Confidence 3568999999999997652 11 13357778999999998876543
No 195
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=47.56 E-value=5.8 Score=41.48 Aligned_cols=21 Identities=29% Similarity=0.363 Sum_probs=16.6
Q ss_pred CCccEEEEeeccCCCCccccc
Q 037169 321 DGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 321 ~G~N~~IfaYGqTGSGKTyTM 341 (860)
.|....++-||++|+|||++.
T Consensus 43 ~~~~~~~ll~G~~G~GKT~la 63 (327)
T 1iqp_A 43 TGSMPHLLFAGPPGVGKTTAA 63 (327)
T ss_dssp HTCCCEEEEESCTTSSHHHHH
T ss_pred cCCCCeEEEECcCCCCHHHHH
Confidence 454445888999999999976
No 196
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=47.42 E-value=1.1e+02 Score=27.11 Aligned_cols=21 Identities=24% Similarity=0.194 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 037169 717 GMLQQKIAELEEKLRKKEEYA 737 (860)
Q Consensus 717 ~~lq~qi~eLe~kl~~Qeeq~ 737 (860)
..++.+..+|..++.....+.
T Consensus 64 Ekl~~eKe~L~~ql~~lq~q~ 84 (94)
T 3jsv_C 64 EKLVEKKEYLQEQLEQLQREF 84 (94)
T ss_dssp HHHHHTTSHHHHHHHHHHHTT
T ss_pred HHHHhHHHHHHHHHHHHHHHH
Confidence 345555555666665555443
No 197
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A*
Probab=47.37 E-value=5.4 Score=41.64 Aligned_cols=17 Identities=35% Similarity=0.382 Sum_probs=15.1
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..++-||++|+|||++.
T Consensus 48 ~~~ll~G~~GtGKt~la 64 (311)
T 4fcw_A 48 GSFLFLGPTGVGKTELA 64 (311)
T ss_dssp EEEEEESCSSSSHHHHH
T ss_pred eEEEEECCCCcCHHHHH
Confidence 57889999999999865
No 198
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=47.14 E-value=6.1 Score=44.65 Aligned_cols=29 Identities=31% Similarity=0.465 Sum_probs=22.8
Q ss_pred hhhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 313 SPLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 313 ~plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
.++...+-.|.-..|+-||++|+|||+..
T Consensus 39 ~~L~~~i~~~~~~~vLL~GppGtGKTtlA 67 (447)
T 3pvs_A 39 KPLPRAIEAGHLHSMILWGPPGTGKTTLA 67 (447)
T ss_dssp SHHHHHHHHTCCCEEEEECSTTSSHHHHH
T ss_pred HHHHHHHHcCCCcEEEEECCCCCcHHHHH
Confidence 45556666676678999999999999875
No 199
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=46.68 E-value=4.8 Score=43.28 Aligned_cols=16 Identities=31% Similarity=0.424 Sum_probs=13.7
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.++-||++|+|||+.+
T Consensus 53 ~~ll~Gp~G~GKTTLa 68 (334)
T 1in4_A 53 HVLLAGPPGLGKTTLA 68 (334)
T ss_dssp CEEEESSTTSSHHHHH
T ss_pred eEEEECCCCCcHHHHH
Confidence 4667999999999976
No 200
>3tbk_A RIG-I helicase domain; DECH helicase, ATP binding, hydrolase; HET: ANP; 2.14A {Mus musculus}
Probab=46.12 E-value=7.5 Score=43.72 Aligned_cols=26 Identities=35% Similarity=0.463 Sum_probs=20.3
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.|+ +..++||||||.+.
T Consensus 11 ~~i~~~~~~~~~--l~~~~tGsGKT~~~ 36 (555)
T 3tbk_A 11 ELALPAKKGKNT--IICAPTGCGKTFVS 36 (555)
T ss_dssp HHHHHHHTTCCE--EEECCTTSCHHHHH
T ss_pred HHHHHHhCCCCE--EEEeCCCChHHHHH
Confidence 356677889875 56789999999874
No 201
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=45.64 E-value=6.2 Score=36.81 Aligned_cols=16 Identities=31% Similarity=0.451 Sum_probs=13.6
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|+-.|++|||||+..
T Consensus 3 ~I~l~G~~GsGKsT~a 18 (179)
T 3lw7_A 3 VILITGMPGSGKSEFA 18 (179)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5788999999999844
No 202
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=45.62 E-value=5.7 Score=38.27 Aligned_cols=18 Identities=22% Similarity=0.420 Sum_probs=14.9
Q ss_pred EEEEeeccCCCCcccccc
Q 037169 325 VCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM~ 342 (860)
-++.-.|++|||||+.+-
T Consensus 10 ei~~l~G~nGsGKSTl~~ 27 (171)
T 4gp7_A 10 SLVVLIGSSGSGKSTFAK 27 (171)
T ss_dssp EEEEEECCTTSCHHHHHH
T ss_pred EEEEEECCCCCCHHHHHH
Confidence 356778999999999874
No 203
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=45.16 E-value=2.6e+02 Score=30.96 Aligned_cols=7 Identities=29% Similarity=0.216 Sum_probs=3.3
Q ss_pred EEEEeec
Q 037169 101 GICIKNA 107 (860)
Q Consensus 101 aIEI~k~ 107 (860)
++.|.+.
T Consensus 277 ~~~I~~~ 283 (471)
T 3mq9_A 277 SAGINAA 283 (471)
T ss_dssp EEEEBSS
T ss_pred EEEEECC
Confidence 4555443
No 204
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=44.86 E-value=1.9e+02 Score=26.54 Aligned_cols=33 Identities=21% Similarity=0.047 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037169 206 KLKDVASLYERDKRLWIIAMNELERKILIWKEE 238 (860)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 238 (860)
.|.+|...+...+..+...+..|..-.+.+..+
T Consensus 60 ~L~~Lqq~fsq~q~~vq~qL~~Lt~~Re~V~~e 92 (112)
T 1x79_B 60 LLEELQQGLSQAKRDVQEQMAVLMQSREQVSEE 92 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555544444444444443333333
No 205
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=44.80 E-value=6.7 Score=41.43 Aligned_cols=26 Identities=31% Similarity=0.436 Sum_probs=19.0
Q ss_pred hHHHhhCCccEEEEeeccCCCCccccc
Q 037169 315 LVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 315 lV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
.+..++.|.. -++..++||||||.++
T Consensus 36 ~i~~~~~~~~-~~l~~~~TGsGKT~~~ 61 (367)
T 1hv8_A 36 VIPLFLNDEY-NIVAQARTGSGKTASF 61 (367)
T ss_dssp HHHHHHHTCS-EEEEECCSSSSHHHHH
T ss_pred HHHHHhCCCC-CEEEECCCCChHHHHH
Confidence 5566677743 3467899999999874
No 206
>4gl2_A Interferon-induced helicase C domain-containing P; MDA5, dsRNA, anti-viral signaling, RIG-I, MAVS, oligomerizat helicase, ATPase; HET: ANP; 3.56A {Homo sapiens}
Probab=44.36 E-value=7.8 Score=45.60 Aligned_cols=26 Identities=35% Similarity=0.424 Sum_probs=21.5
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..+++|.| ++..++||||||.+.
T Consensus 14 ~~i~~il~g~~--~ll~~~TGsGKTl~~ 39 (699)
T 4gl2_A 14 EVAQPALEGKN--IIICLPTGCGKTRVA 39 (699)
T ss_dssp HHHHHHHSSCC--EEECCCTTSCHHHHH
T ss_pred HHHHHHHhCCC--EEEEcCCCCcHHHHH
Confidence 46778888987 567899999999875
No 207
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=44.33 E-value=8.7 Score=38.70 Aligned_cols=26 Identities=27% Similarity=0.345 Sum_probs=19.3
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
++++.+-.|--++| .|++|||||+.+
T Consensus 14 ~~l~~i~~Ge~~~l--iG~nGsGKSTLl 39 (208)
T 3b85_A 14 HYVDAIDTNTIVFG--LGPAGSGKTYLA 39 (208)
T ss_dssp HHHHHHHHCSEEEE--ECCTTSSTTHHH
T ss_pred HHHHhccCCCEEEE--ECCCCCCHHHHH
Confidence 45666656665544 799999999976
No 208
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=44.08 E-value=7.5 Score=38.26 Aligned_cols=29 Identities=28% Similarity=0.335 Sum_probs=20.4
Q ss_pred hhhHHHhhC-Cc--cEEEEeeccCCCCccccc
Q 037169 313 SPLVTSVLD-GY--NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 313 ~plV~~~l~-G~--N~~IfaYGqTGSGKTyTM 341 (860)
-|-++.++. |. ...+.-+|++|||||+.+
T Consensus 9 ~~~Ld~~~~ggi~~G~~~~i~G~~GsGKTtl~ 40 (235)
T 2w0m_A 9 ILDFDKLIQGGIPQGFFIALTGEPGTGKTIFS 40 (235)
T ss_dssp CHHHHGGGTTSEETTCEEEEECSTTSSHHHHH
T ss_pred chHHHHHhcCCCcCCCEEEEEcCCCCCHHHHH
Confidence 355666665 33 235666899999999876
No 209
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=44.06 E-value=1.7e+02 Score=25.94 Aligned_cols=15 Identities=47% Similarity=0.643 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHHHH
Q 037169 693 ALHHKVRELENRLKA 707 (860)
Q Consensus 693 ~le~ki~~lE~kl~~ 707 (860)
.+..+++.++..++.
T Consensus 74 ~L~~~~e~ie~~i~~ 88 (117)
T 2zqm_A 74 ELKEKIETLEVRLNA 88 (117)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 344444444433333
No 210
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=43.64 E-value=2.5e+02 Score=31.34 Aligned_cols=15 Identities=7% Similarity=0.324 Sum_probs=11.4
Q ss_pred ccccCCCchHHHHHh
Q 037169 788 SDLLKGTNSLRELRR 802 (860)
Q Consensus 788 ~~~~~~~~~~~~~~~ 802 (860)
..+.=|.+.++.++.
T Consensus 224 gEfWLGle~ih~LT~ 238 (409)
T 1m1j_C 224 TEFWLGNEKIHLITT 238 (409)
T ss_dssp CCEECCHHHHHHHHT
T ss_pred ccEEeeccceeeccc
Confidence 355668888999987
No 211
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=43.63 E-value=7.4 Score=42.56 Aligned_cols=20 Identities=35% Similarity=0.428 Sum_probs=15.3
Q ss_pred hCCccEEEEeeccCCCCccccc
Q 037169 320 LDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 320 l~G~N~~IfaYGqTGSGKTyTM 341 (860)
-.|.+.+| .|+||||||+++
T Consensus 173 ~~G~~i~i--vG~sGsGKSTll 192 (361)
T 2gza_A 173 QLERVIVV--AGETGSGKTTLM 192 (361)
T ss_dssp HTTCCEEE--EESSSSCHHHHH
T ss_pred hcCCEEEE--ECCCCCCHHHHH
Confidence 35766554 499999999987
No 212
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=43.59 E-value=8.4 Score=41.75 Aligned_cols=29 Identities=28% Similarity=0.458 Sum_probs=21.3
Q ss_pred hhhH-HHhhCC---ccEEEEe--eccCCCCccccc
Q 037169 313 SPLV-TSVLDG---YNVCIFA--YGQTGTGKTFTM 341 (860)
Q Consensus 313 ~plV-~~~l~G---~N~~Ifa--YGqTGSGKTyTM 341 (860)
..++ ..+..| ...+++- ||+.|+|||+.+
T Consensus 35 ~~~l~~~~~~~~~~~~~~~li~i~G~~G~GKT~L~ 69 (412)
T 1w5s_A 35 ARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLA 69 (412)
T ss_dssp HHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHH
T ss_pred HHHHhHHHhcCCCCCCCEEEEeCcCcCCCCHHHHH
Confidence 3344 555556 5567888 999999999976
No 213
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=43.56 E-value=5.9 Score=41.55 Aligned_cols=15 Identities=33% Similarity=0.592 Sum_probs=13.7
Q ss_pred EEeeccCCCCccccc
Q 037169 327 IFAYGQTGTGKTFTM 341 (860)
Q Consensus 327 IfaYGqTGSGKTyTM 341 (860)
|+-||++|||||+.+
T Consensus 47 vlL~Gp~GtGKTtLa 61 (274)
T 2x8a_A 47 VLLAGPPGCGKTLLA 61 (274)
T ss_dssp EEEESSTTSCHHHHH
T ss_pred EEEECCCCCcHHHHH
Confidence 888999999999875
No 214
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=43.38 E-value=8.4 Score=37.78 Aligned_cols=29 Identities=31% Similarity=0.476 Sum_probs=22.3
Q ss_pred hhhHHHhhC-Ccc--EEEEeeccCCCCccccc
Q 037169 313 SPLVTSVLD-GYN--VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 313 ~plV~~~l~-G~N--~~IfaYGqTGSGKTyTM 341 (860)
-|-++.++. |.. ..+.-+|++|||||..+
T Consensus 6 ~~~LD~~l~Ggi~~G~~~~i~G~~GsGKTtl~ 37 (220)
T 2cvh_A 6 TKSLDSLLGGGFAPGVLTQVYGPYASGKTTLA 37 (220)
T ss_dssp CHHHHHHTTSSBCTTSEEEEECSTTSSHHHHH
T ss_pred cHHHHHhhcCCCcCCEEEEEECCCCCCHHHHH
Confidence 356777886 443 57889999999999876
No 215
>2fwr_A DNA repair protein RAD25; DNA unwinding, XPB, DNA binding protein; HET: DNA; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.19 c.37.1.19 PDB: 2fzl_A*
Probab=43.17 E-value=8.2 Score=43.04 Aligned_cols=26 Identities=23% Similarity=0.089 Sum_probs=20.1
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.+ ++..|+||||||.+.
T Consensus 100 ~ai~~i~~~~~--~ll~~~TGsGKT~~~ 125 (472)
T 2fwr_A 100 KALERWLVDKR--GCIVLPTGSGKTHVA 125 (472)
T ss_dssp HHHHHHTTTTE--EEEECCTTSCHHHHH
T ss_pred HHHHHHHhcCC--EEEEeCCCCCHHHHH
Confidence 45667777765 566789999999985
No 216
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=42.74 E-value=5.9 Score=42.23 Aligned_cols=20 Identities=50% Similarity=0.640 Sum_probs=16.4
Q ss_pred CccEEEEeeccCCCCccccc
Q 037169 322 GYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 322 G~N~~IfaYGqTGSGKTyTM 341 (860)
+...+++-||++|+|||+.+
T Consensus 43 ~~~~~vli~G~~G~GKTtl~ 62 (386)
T 2qby_A 43 EKPNNIFIYGLTGTGKTAVV 62 (386)
T ss_dssp CCCCCEEEEECTTSSHHHHH
T ss_pred CCCCeEEEECCCCCCHHHHH
Confidence 33557889999999999865
No 217
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=42.68 E-value=5.2 Score=41.65 Aligned_cols=21 Identities=33% Similarity=0.308 Sum_probs=16.3
Q ss_pred CCccEEEEeeccCCCCccccc
Q 037169 321 DGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 321 ~G~N~~IfaYGqTGSGKTyTM 341 (860)
.|....++-||++|+|||++.
T Consensus 35 ~~~~~~~ll~G~~G~GKt~la 55 (319)
T 2chq_A 35 RKNIPHLLFSGPPGTGKTATA 55 (319)
T ss_dssp TTCCCCEEEESSSSSSHHHHH
T ss_pred CCCCCeEEEECcCCcCHHHHH
Confidence 344334888999999999875
No 218
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=42.58 E-value=1.6e+02 Score=25.45 Aligned_cols=36 Identities=22% Similarity=0.303 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhh
Q 037169 700 ELENRLKARTQEFEVHSGMLQQKIAELEEKLRKKEEYATA 739 (860)
Q Consensus 700 ~lE~kl~~~~~~~e~~~~~lq~qi~eLe~kl~~Qeeq~~~ 739 (860)
.+|.+++.++.+ ...+++++...+.+++....++-+
T Consensus 44 QyEkKLKsTK~E----l~~Lq~qLe~kd~ei~rL~~~l~~ 79 (81)
T 3qh9_A 44 QYEWKLKATKAE----VAQLQEQVALKDAEIERLHSQLSR 79 (81)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhhhHHH----HHHHHHHHHhhHHHHHHHHHHHhh
Confidence 456666666644 457888888888888877777644
No 219
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=42.15 E-value=7.9 Score=41.08 Aligned_cols=20 Identities=30% Similarity=0.230 Sum_probs=16.3
Q ss_pred CccEEEEeeccCCCCccccc
Q 037169 322 GYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 322 G~N~~IfaYGqTGSGKTyTM 341 (860)
+....|+-||++|+|||+..
T Consensus 53 ~~~~~vll~G~~GtGKT~la 72 (338)
T 3pfi_A 53 ECLDHILFSGPAGLGKTTLA 72 (338)
T ss_dssp SCCCCEEEECSTTSSHHHHH
T ss_pred CCCCeEEEECcCCCCHHHHH
Confidence 34457899999999999865
No 220
>1w36_D RECD, exodeoxyribonuclease V alpha chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 PDB: 3k70_D*
Probab=42.13 E-value=6.3 Score=46.26 Aligned_cols=25 Identities=32% Similarity=0.325 Sum_probs=18.5
Q ss_pred HHHhhCCccEEEEeeccCCCCcccccc
Q 037169 316 VTSVLDGYNVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 316 V~~~l~G~N~~IfaYGqTGSGKTyTM~ 342 (860)
|..++.| ..++..|++|||||+|+.
T Consensus 158 i~~~l~~--~~~vi~G~pGTGKTt~l~ 182 (608)
T 1w36_D 158 AAVALTR--RISVISGGPGTGKTTTVA 182 (608)
T ss_dssp HHHHHTB--SEEEEECCTTSTHHHHHH
T ss_pred HHHHhcC--CCEEEEeCCCCCHHHHHH
Confidence 3444543 567889999999999873
No 221
>3sqw_A ATP-dependent RNA helicase MSS116, mitochondrial; RECA fold, RNA dependent ATPase, RNA helicase; HET: ANP; 1.91A {Saccharomyces cerevisiae S288C}
Probab=42.10 E-value=11 Score=43.62 Aligned_cols=27 Identities=33% Similarity=0.522 Sum_probs=20.6
Q ss_pred hhHHHhhCCccEEEEeeccCCCCcccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFT 340 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyT 340 (860)
.++..++.|.+--+++.++||||||.+
T Consensus 50 ~~i~~il~~~~~dvlv~apTGsGKTl~ 76 (579)
T 3sqw_A 50 KTIKPILSSEDHDVIARAKTGTGKTFA 76 (579)
T ss_dssp HHHHHHHCSSSEEEEEECCTTSCHHHH
T ss_pred HHHHHHHccCCCeEEEEcCCCcHHHHH
Confidence 466777755455668889999999986
No 222
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=42.03 E-value=1.4e+02 Score=26.87 Aligned_cols=16 Identities=31% Similarity=0.312 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHHH
Q 037169 668 CSNVQRKVKELENKLK 683 (860)
Q Consensus 668 ~~~lq~~~~ele~~l~ 683 (860)
+..++.++..+...|.
T Consensus 67 ~~~L~~~~~~lk~~L~ 82 (103)
T 4h22_A 67 HSILQFQFAEVKEALK 82 (103)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3334444444444444
No 223
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=41.92 E-value=7 Score=38.86 Aligned_cols=17 Identities=29% Similarity=0.405 Sum_probs=13.9
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|.-.|++|||||.++
T Consensus 9 ~~i~l~GpsGsGKsTl~ 25 (208)
T 3tau_A 9 LLIVLSGPSGVGKGTVR 25 (208)
T ss_dssp CEEEEECCTTSCHHHHH
T ss_pred cEEEEECcCCCCHHHHH
Confidence 35667899999999876
No 224
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=41.92 E-value=6.3 Score=41.41 Aligned_cols=20 Identities=25% Similarity=0.310 Sum_probs=16.1
Q ss_pred CccEEEEeeccCCCCccccc
Q 037169 322 GYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 322 G~N~~IfaYGqTGSGKTyTM 341 (860)
+....|+-||++|+|||+..
T Consensus 36 ~~~~~vll~G~~GtGKT~la 55 (324)
T 1hqc_A 36 EPLEHLLLFGPPGLGKTTLA 55 (324)
T ss_dssp SCCCCCEEECCTTCCCHHHH
T ss_pred CCCCcEEEECCCCCCHHHHH
Confidence 34467888999999999865
No 225
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=41.90 E-value=72 Score=30.19 Aligned_cols=17 Identities=24% Similarity=0.456 Sum_probs=7.5
Q ss_pred hHHHHHHHHHHHHHHHH
Q 037169 664 KEEICSNVQRKVKELEN 680 (860)
Q Consensus 664 ~ee~~~~lq~~~~ele~ 680 (860)
.+.....+..++..|..
T Consensus 65 aE~~~~~ie~ElE~LTa 81 (135)
T 2e7s_A 65 AEEEADKLNKEVEDLTA 81 (135)
T ss_dssp HHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33444444444444443
No 226
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=41.85 E-value=10 Score=37.38 Aligned_cols=30 Identities=27% Similarity=0.401 Sum_probs=22.5
Q ss_pred chhhHHHhhC-Cc--cEEEEeeccCCCCccccc
Q 037169 312 ASPLVTSVLD-GY--NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 312 v~plV~~~l~-G~--N~~IfaYGqTGSGKTyTM 341 (860)
.-|-++.++. |. ...+.-+|++|||||..+
T Consensus 10 G~~~LD~~l~ggi~~G~~~~l~G~nGsGKSTll 42 (231)
T 4a74_A 10 GSKSLDKLLGGGIETQAITEVFGEFGSGKTQLA 42 (231)
T ss_dssp SCHHHHHHTTSSEESSEEEEEEESTTSSHHHHH
T ss_pred CChhHHhHhcCCCCCCcEEEEECCCCCCHHHHH
Confidence 3466777884 43 356778999999999876
No 227
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20
Probab=41.79 E-value=6.6 Score=42.67 Aligned_cols=17 Identities=41% Similarity=0.614 Sum_probs=14.4
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-||++|+|||++.
T Consensus 73 ~~ill~Gp~GtGKT~la 89 (376)
T 1um8_A 73 SNILLIGPTGSGKTLMA 89 (376)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred CCEEEECCCCCCHHHHH
Confidence 35788999999999865
No 228
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B*
Probab=41.79 E-value=6.9 Score=41.33 Aligned_cols=17 Identities=35% Similarity=0.342 Sum_probs=14.8
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..++-||++|+|||+++
T Consensus 49 ~~~L~~G~~G~GKT~la 65 (324)
T 3u61_B 49 HIILHSPSPGTGKTTVA 65 (324)
T ss_dssp SEEEECSSTTSSHHHHH
T ss_pred eEEEeeCcCCCCHHHHH
Confidence 56788999999999976
No 229
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=41.76 E-value=7.2 Score=42.36 Aligned_cols=20 Identities=40% Similarity=0.577 Sum_probs=16.3
Q ss_pred CccEEEEeeccCCCCccccc
Q 037169 322 GYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 322 G~N~~IfaYGqTGSGKTyTM 341 (860)
+....|+-||++|+|||+..
T Consensus 115 ~~~~~vLl~GppGtGKT~la 134 (357)
T 3d8b_A 115 GPPKGILLFGPPGTGKTLIG 134 (357)
T ss_dssp SCCSEEEEESSTTSSHHHHH
T ss_pred CCCceEEEECCCCCCHHHHH
Confidence 34557889999999999875
No 230
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=41.72 E-value=7.1 Score=38.02 Aligned_cols=16 Identities=25% Similarity=0.347 Sum_probs=13.1
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|.-.|++|||||+.+
T Consensus 9 ii~l~Gp~GsGKSTl~ 24 (205)
T 3tr0_A 9 LFIISAPSGAGKTSLV 24 (205)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEECcCCCCHHHHH
Confidence 4556799999999876
No 231
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=41.38 E-value=75 Score=27.55 Aligned_cols=43 Identities=21% Similarity=0.220 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 037169 207 LKDVASLYERDKRLWIIAMNELERKILIWKEEHSQLAREAHEC 249 (860)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~e~~~~ 249 (860)
|+++...|..........+..++..+..++.+..+...|.+..
T Consensus 19 l~e~E~~~~~~l~~~q~~i~~lE~el~~~r~e~~~ql~EYq~L 61 (86)
T 1x8y_A 19 LRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQEL 61 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555566666666777777777777777777777666665554
No 232
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=41.21 E-value=13 Score=39.27 Aligned_cols=29 Identities=24% Similarity=0.352 Sum_probs=21.0
Q ss_pred hhhHHHhhCCc-----cEEEEeeccCCCCccccc
Q 037169 313 SPLVTSVLDGY-----NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 313 ~plV~~~l~G~-----N~~IfaYGqTGSGKTyTM 341 (860)
..++..++.|+ ...|+..|++|||||+..
T Consensus 17 ~~~~~~~l~~~~~~~~~~livl~G~sGsGKSTla 50 (287)
T 1gvn_B 17 NDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLR 50 (287)
T ss_dssp HHHHHHHHTTCCCCSSCEEEEEECCTTSCTHHHH
T ss_pred HHHHHHHhccccCCCCCeEEEEECCCCCCHHHHH
Confidence 44555666543 467899999999999854
No 233
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=41.01 E-value=6.7 Score=42.62 Aligned_cols=17 Identities=41% Similarity=0.776 Sum_probs=14.3
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-||++|+|||+..
T Consensus 85 ~~iLL~GppGtGKT~la 101 (355)
T 2qp9_X 85 SGILLYGPPGTGKSYLA 101 (355)
T ss_dssp CCEEEECSTTSCHHHHH
T ss_pred ceEEEECCCCCcHHHHH
Confidence 35788999999999865
No 234
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=40.78 E-value=1.4e+02 Score=25.81 Aligned_cols=42 Identities=17% Similarity=0.170 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHH
Q 037169 634 NELESQLESKTQLCRQLEKQLLQVSEGMKGKEEICSNVQRKVKELENKL 682 (860)
Q Consensus 634 ~ele~~l~~~~~~~~~le~~l~~l~~~~~~~ee~~~~lq~~~~ele~~l 682 (860)
++|.-.+.+...+..|+|+.|..-. +.+..+++.+...+..+
T Consensus 29 ~~Lr~kv~elEnErlQyEkKLKsTK-------~El~~Lq~qLe~kd~ei 70 (81)
T 3qh9_A 29 RHLKIKVEELENERNQYEWKLKATK-------AEVAQLQEQVALKDAEI 70 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhH-------HHHHHHHHHHHhhHHHH
Confidence 3333333333344445555443322 34444555544444433
No 235
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=40.52 E-value=14 Score=43.33 Aligned_cols=12 Identities=25% Similarity=0.299 Sum_probs=6.0
Q ss_pred ChHHHHHHHHHH
Q 037169 580 DISKLQKVKMML 591 (860)
Q Consensus 580 ~~~~~~~lk~~l 591 (860)
+.-+++.++.+-
T Consensus 298 d~~e~qqm~~~a 309 (575)
T 2i1j_A 298 DTIDVQQMKAQA 309 (575)
T ss_dssp CCHHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 344555555443
No 236
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=40.21 E-value=1.2e+02 Score=28.56 Aligned_cols=14 Identities=14% Similarity=0.306 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHHHH
Q 037169 694 LHHKVRELENRLKA 707 (860)
Q Consensus 694 le~ki~~lE~kl~~ 707 (860)
++.+.+.++..+..
T Consensus 101 ~e~r~~~L~~ql~e 114 (135)
T 2e7s_A 101 IEILNKRLTEQLRE 114 (135)
T ss_dssp HHHHHHHHHHTTTH
T ss_pred HHHHHHHHHHHHHH
Confidence 34444444444333
No 237
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=40.17 E-value=7.9 Score=41.26 Aligned_cols=15 Identities=40% Similarity=0.755 Sum_probs=13.8
Q ss_pred EEeeccCCCCccccc
Q 037169 327 IFAYGQTGTGKTFTM 341 (860)
Q Consensus 327 IfaYGqTGSGKTyTM 341 (860)
++-||++|+|||+++
T Consensus 39 ~ll~Gp~G~GKTtl~ 53 (354)
T 1sxj_E 39 LLLYGPNGTGKKTRC 53 (354)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 778999999999987
No 238
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A
Probab=39.97 E-value=7.3 Score=42.14 Aligned_cols=17 Identities=41% Similarity=0.601 Sum_probs=13.9
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-||++|+|||+..
T Consensus 52 ~~vll~GppGtGKT~la 68 (363)
T 3hws_A 52 SNILLIGPTGSGKTLLA 68 (363)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred CeEEEECCCCCCHHHHH
Confidence 34677999999999864
No 239
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=39.87 E-value=9.1 Score=39.84 Aligned_cols=27 Identities=30% Similarity=0.359 Sum_probs=18.5
Q ss_pred hHHHhhCCccEEEEeeccCCCCccccc
Q 037169 315 LVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 315 lV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
+...+-.|.-..++-||++|+|||++.
T Consensus 33 l~~~l~~~~~~~~ll~G~~G~GKt~la 59 (323)
T 1sxj_B 33 LQQIAKDGNMPHMIISGMPGIGKTTSV 59 (323)
T ss_dssp HHHHHHSCCCCCEEEECSTTSSHHHHH
T ss_pred HHHHHHcCCCCeEEEECcCCCCHHHHH
Confidence 333333454334888999999999875
No 240
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=39.83 E-value=7.2 Score=40.28 Aligned_cols=19 Identities=32% Similarity=0.539 Sum_probs=16.7
Q ss_pred cEEEEeeccCCCCcccccc
Q 037169 324 NVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM~ 342 (860)
...||..|..|+||||+|.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~ 24 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAML 24 (228)
T ss_dssp CEEEEEESSTTSSHHHHHH
T ss_pred eEEEEEECCCCCcHHHHHH
Confidence 4669999999999999984
No 241
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=39.79 E-value=7.8 Score=37.50 Aligned_cols=16 Identities=19% Similarity=0.436 Sum_probs=13.2
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|.-.|++|||||..+
T Consensus 7 ~i~i~GpsGsGKSTL~ 22 (180)
T 1kgd_A 7 TLVLLGAHGVGRRHIK 22 (180)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4566799999999865
No 242
>2ykg_A Probable ATP-dependent RNA helicase DDX58; hydrolase, innate immunity; 2.50A {Homo sapiens} PDB: 3tmi_A*
Probab=39.63 E-value=11 Score=44.42 Aligned_cols=26 Identities=35% Similarity=0.525 Sum_probs=20.6
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
.++..++.|.|+ +..++||||||...
T Consensus 20 ~~i~~~l~g~~~--iv~~~TGsGKTl~~ 45 (696)
T 2ykg_A 20 ELALPAMKGKNT--IICAPTGCGKTFVS 45 (696)
T ss_dssp HHHHHHHTTCCE--EEECCTTSSHHHHH
T ss_pred HHHHHHHcCCCE--EEEcCCCchHHHHH
Confidence 466778889885 57789999999853
No 243
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=39.60 E-value=7.8 Score=42.46 Aligned_cols=18 Identities=28% Similarity=0.554 Sum_probs=15.4
Q ss_pred cEEEEeeccCCCCccccc
Q 037169 324 NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM 341 (860)
...|+-||++|+|||+..
T Consensus 148 ~~~vLL~GppGtGKT~la 165 (389)
T 3vfd_A 148 ARGLLLFGPPGNGKTMLA 165 (389)
T ss_dssp CSEEEEESSTTSCHHHHH
T ss_pred CceEEEECCCCCCHHHHH
Confidence 357899999999999865
No 244
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=39.51 E-value=4.9 Score=42.71 Aligned_cols=23 Identities=26% Similarity=0.387 Sum_probs=16.8
Q ss_pred HHhhCCccEEEEeeccCCCCccccc
Q 037169 317 TSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 317 ~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..|. .|+-||++|+|||+.+
T Consensus 41 ~~l~~~~--~vll~G~pGtGKT~la 63 (331)
T 2r44_A 41 IGICTGG--HILLEGVPGLAKTLSV 63 (331)
T ss_dssp HHHHHTC--CEEEESCCCHHHHHHH
T ss_pred HHHHcCC--eEEEECCCCCcHHHHH
Confidence 3344444 4677999999999976
No 245
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=39.33 E-value=6.8 Score=42.93 Aligned_cols=18 Identities=33% Similarity=0.475 Sum_probs=14.2
Q ss_pred cEEEEeeccCCCCccccc
Q 037169 324 NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM 341 (860)
|.-++..|+||||||++|
T Consensus 35 ~~~~~i~G~~G~GKs~~~ 52 (392)
T 4ag6_A 35 NSNWTILAKPGAGKSFTA 52 (392)
T ss_dssp CCCEEEECCTTSSHHHHH
T ss_pred cCceEEEcCCCCCHHHHH
Confidence 334566799999999987
No 246
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=39.31 E-value=9.9 Score=43.02 Aligned_cols=30 Identities=17% Similarity=0.168 Sum_probs=22.0
Q ss_pred chhhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 312 ASPLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 312 v~plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
+..++..+-.+....++-||++|+|||+..
T Consensus 189 i~~l~~~l~r~~~~~~LL~G~pG~GKT~la 218 (468)
T 3pxg_A 189 IQRVIEVLSRRTKNNPVLIGEPGVGKTAIA 218 (468)
T ss_dssp HHHHHHHHHCSSSCEEEEESCTTTTTHHHH
T ss_pred HHHHHHHHhccCCCCeEEECCCCCCHHHHH
Confidence 344555555555666788999999999976
No 247
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=39.17 E-value=10 Score=37.76 Aligned_cols=29 Identities=34% Similarity=0.495 Sum_probs=21.2
Q ss_pred hhhHHHhhCC-c--cEEEEeeccCCCCccccc
Q 037169 313 SPLVTSVLDG-Y--NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 313 ~plV~~~l~G-~--N~~IfaYGqTGSGKTyTM 341 (860)
-|-++.++.| . ...+.-+|++|||||..+
T Consensus 9 ~~~LD~~l~gGl~~G~~~~i~G~~GsGKTtl~ 40 (247)
T 2dr3_A 9 IPGVDEILHGGIPERNVVLLSGGPGTGKTIFS 40 (247)
T ss_dssp CTTHHHHTTTSEETTCEEEEEECTTSSHHHHH
T ss_pred chhHHHHcCCCCCCCcEEEEECCCCCCHHHHH
Confidence 3456777654 2 346778999999999984
No 248
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=38.81 E-value=9 Score=36.21 Aligned_cols=16 Identities=31% Similarity=0.441 Sum_probs=13.8
Q ss_pred EEEEeeccCCCCcccc
Q 037169 325 VCIFAYGQTGTGKTFT 340 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyT 340 (860)
..|+-.|..|||||+.
T Consensus 3 ~~I~i~G~~GsGKST~ 18 (181)
T 1ly1_A 3 KIILTIGCPGSGKSTW 18 (181)
T ss_dssp EEEEEECCTTSSHHHH
T ss_pred eEEEEecCCCCCHHHH
Confidence 4688999999999984
No 249
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=38.55 E-value=2.2e+02 Score=31.80 Aligned_cols=26 Identities=31% Similarity=0.347 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccc
Q 037169 718 MLQQKIAELEEKLRKKEEYATAYCFR 743 (860)
Q Consensus 718 ~lq~qi~eLe~kl~~Qeeq~~~~~~~ 743 (860)
....+|..|+..+..++......|..
T Consensus 116 ~~~~~i~~L~~~v~~l~~~~~~~~~~ 141 (411)
T 3ghg_C 116 SNNQKIVNLKEKVAQLEAQCQEPCKD 141 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCSCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCc
Confidence 44567788888888777777665543
No 250
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=38.35 E-value=1.9e+02 Score=24.80 Aligned_cols=10 Identities=20% Similarity=0.557 Sum_probs=3.8
Q ss_pred HHHHHHHHHH
Q 037169 666 EICSNVQRKV 675 (860)
Q Consensus 666 e~~~~lq~~~ 675 (860)
+++..++++.
T Consensus 46 ~mi~~l~~E~ 55 (78)
T 3iv1_A 46 EMVTRLDQEV 55 (78)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 251
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=38.26 E-value=8.3 Score=37.12 Aligned_cols=17 Identities=24% Similarity=0.436 Sum_probs=14.3
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
.+|.-.|++|||||+.+
T Consensus 10 ~~i~l~G~~GsGKSTl~ 26 (191)
T 1zp6_A 10 NILLLSGHPGSGKSTIA 26 (191)
T ss_dssp EEEEEEECTTSCHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 45778899999999865
No 252
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=38.21 E-value=8.3 Score=43.33 Aligned_cols=17 Identities=35% Similarity=0.704 Sum_probs=14.7
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-||++|+|||+..
T Consensus 168 ~~vLL~GppGtGKT~lA 184 (444)
T 2zan_A 168 RGILLFGPPGTGKSYLA 184 (444)
T ss_dssp SEEEEECSTTSSHHHHH
T ss_pred ceEEEECCCCCCHHHHH
Confidence 46888999999999875
No 253
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=38.10 E-value=75 Score=24.77 Aligned_cols=39 Identities=21% Similarity=0.395 Sum_probs=27.0
Q ss_pred hhHHHHhhhhH-HHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 037169 134 AQDKLMRMKSM-AKCEKRIKELKIQCQLKTDECYEAWMSL 172 (860)
Q Consensus 134 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (860)
++.++-|-|.+ +.+..++.+|...|..+..|+..+...|
T Consensus 2 aeq~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~LL 41 (48)
T 3vmx_A 2 SERQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNKLL 41 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 45667665555 6778888888888888777766655544
No 254
>2gk6_A Regulator of nonsense transcripts 1; UPF1, helicase, NMD, hydrolase; HET: ADP; 2.40A {Homo sapiens} PDB: 2gjk_A* 2gk7_A 2xzo_A* 2xzp_A
Probab=37.81 E-value=11 Score=44.38 Aligned_cols=27 Identities=37% Similarity=0.390 Sum_probs=19.4
Q ss_pred hhHHHhhCCccEEEEeeccCCCCcccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM~ 342 (860)
..|..++.+ ..++..|++|||||+|+.
T Consensus 187 ~av~~~l~~--~~~li~GppGTGKT~~~~ 213 (624)
T 2gk6_A 187 YAVKTVLQR--PLSLIQGPPGTGKTVTSA 213 (624)
T ss_dssp HHHHHHHTC--SEEEEECCTTSCHHHHHH
T ss_pred HHHHHHhcC--CCeEEECCCCCCHHHHHH
Confidence 345566643 345679999999999974
No 255
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=37.62 E-value=9.6 Score=36.50 Aligned_cols=15 Identities=40% Similarity=0.589 Sum_probs=13.0
Q ss_pred EEEeeccCCCCcccc
Q 037169 326 CIFAYGQTGTGKTFT 340 (860)
Q Consensus 326 ~IfaYGqTGSGKTyT 340 (860)
.|+-.|.+|||||+.
T Consensus 7 ~i~l~G~~GsGKst~ 21 (185)
T 3trf_A 7 NIYLIGLMGAGKTSV 21 (185)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 577899999999974
No 256
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium}
Probab=37.62 E-value=8.8 Score=40.79 Aligned_cols=20 Identities=25% Similarity=0.493 Sum_probs=16.5
Q ss_pred CccEEEEeeccCCCCccccc
Q 037169 322 GYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 322 G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..|+-||++|+|||+..
T Consensus 23 ~~~~~vLi~Ge~GtGKt~lA 42 (304)
T 1ojl_A 23 PSDATVLIHGDSGTGKELVA 42 (304)
T ss_dssp STTSCEEEESCTTSCHHHHH
T ss_pred CCCCcEEEECCCCchHHHHH
Confidence 45667888999999999854
No 257
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=37.49 E-value=10 Score=41.17 Aligned_cols=26 Identities=19% Similarity=0.150 Sum_probs=19.7
Q ss_pred hhHHHhhCCccEEEEeeccCCCCcccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM~ 342 (860)
..+..++.| -++..++||+|||.++.
T Consensus 16 ~~i~~~~~~---~~ll~~~tG~GKT~~~~ 41 (494)
T 1wp9_A 16 VIYAKCKET---NCLIVLPTGLGKTLIAM 41 (494)
T ss_dssp HHHHHGGGS---CEEEECCTTSCHHHHHH
T ss_pred HHHHHHhhC---CEEEEcCCCCCHHHHHH
Confidence 356777888 34567899999999864
No 258
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=37.17 E-value=8.3 Score=39.50 Aligned_cols=19 Identities=26% Similarity=0.169 Sum_probs=15.8
Q ss_pred cEEEEeeccCCCCcccccc
Q 037169 324 NVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM~ 342 (860)
-..++-||++|||||..+.
T Consensus 12 G~i~litG~mGsGKTT~ll 30 (223)
T 2b8t_A 12 GWIEFITGPMFAGKTAELI 30 (223)
T ss_dssp CEEEEEECSTTSCHHHHHH
T ss_pred cEEEEEECCCCCcHHHHHH
Confidence 3578889999999998764
No 259
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=37.09 E-value=9.9 Score=36.09 Aligned_cols=17 Identities=24% Similarity=0.290 Sum_probs=14.4
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-.|.+|||||+..
T Consensus 4 ~~i~l~G~~GsGKST~a 20 (178)
T 1qhx_A 4 RMIILNGGSSAGKSGIV 20 (178)
T ss_dssp CEEEEECCTTSSHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 36889999999999864
No 260
>1lq7_A Alpha3W; three helix bundle, de novo protein; NMR {} SCOP: k.9.1.1
Probab=37.08 E-value=1.2e+02 Score=24.06 Aligned_cols=39 Identities=28% Similarity=0.433 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH
Q 037169 670 NVQRKVKELENKLKEHDQSENVTALHHKVRELENRLKAR 708 (860)
Q Consensus 670 ~lq~~~~ele~~l~~~~q~~~~~~le~ki~~lE~kl~~~ 708 (860)
.+.++++.++.+.+.+.--..++.+.++.+++..+++++
T Consensus 6 aleekvkaleekvkalggggrieelkkkweelkkkieel 44 (67)
T 1lq7_A 6 ALEEKVKALEEKVKALGGGGRIEELKKKWEELKKKIEEL 44 (67)
T ss_dssp HHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHh
Confidence 445566667766666655555666777777777666554
No 261
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=36.96 E-value=7.9 Score=37.61 Aligned_cols=15 Identities=40% Similarity=0.645 Sum_probs=12.6
Q ss_pred EEeeccCCCCccccc
Q 037169 327 IFAYGQTGTGKTFTM 341 (860)
Q Consensus 327 IfaYGqTGSGKTyTM 341 (860)
|.-.|++|||||+++
T Consensus 4 i~l~GpsGaGKsTl~ 18 (186)
T 3a00_A 4 IVISGPSGTGKSTLL 18 (186)
T ss_dssp EEEESSSSSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 445799999999876
No 262
>3mx7_A FAS apoptotic inhibitory molecule 1; beta sheet, apoptosis; 1.76A {Homo sapiens}
Probab=36.95 E-value=2e+02 Score=25.35 Aligned_cols=76 Identities=18% Similarity=0.276 Sum_probs=45.2
Q ss_pred ceEEEeeCCCCcEEEEEEeeecccCCCCCcceEEEEEECCEEEeeccchhhccCCCcceEEEEEEEeeCCCceEEEEEEc
Q 037169 13 FSYRIGNLSPGDYLVDLHFAEIVNANGPKGMRVFDVFMQEEKVLLEIDIYSIVGANKPLQVVDVRVSVGMDEVLLIRFDG 92 (860)
Q Consensus 13 ~sY~f~~v~~G~Y~V~LhFaEi~~~~~~~g~RvFdV~ing~~vl~~fDI~~~~G~~~a~~~~~~~V~~~~~g~L~I~F~~ 92 (860)
..|.+ |+.+|-|.|.|.- .+..|.|+ |.|+|+.+++.==.+.-+|. ..|.+. .+.-...|...+
T Consensus 6 a~W~V-pl~~~~HkieFeH------gtttGkrv--i~VDGkev~r~~wmfklvGk------e~F~ig-~~~~k~~I~I~a 69 (90)
T 3mx7_A 6 AVWDV-ALSDGVHKIEFEH------GTTSGKRV--VYVDGKEEIRKEWMFKLVGK------ETFYVG-AAKTKATINIDA 69 (90)
T ss_dssp EEEEE-EETTEEEEEEEEE------CTTTCCEE--EEETTEEEEEECCCSCCCEE------EEEEET-TTTEEEEEEEEE
T ss_pred EEEEe-cCCCCcEEEEEEe------ccccceEE--EEECCEEEEecCCeEEEEee------EeEEEC-CcceEEEEEEEe
Confidence 35899 7788888886642 23668887 88999987765323333331 334443 112446666666
Q ss_pred cCCCcEEEEEEE
Q 037169 93 ACGSPIVNGICI 104 (860)
Q Consensus 93 ~~g~p~InaIEI 104 (860)
..+....-.++|
T Consensus 70 ~~~~~y~YtL~V 81 (90)
T 3mx7_A 70 ISGFAYEYTLEI 81 (90)
T ss_dssp ETTTEEEEEEEE
T ss_pred cCCccEEEEEEE
Confidence 666655554444
No 263
>1e9r_A Conjugal transfer protein TRWB; coupling protein, bacterial conjugation, F1-ATPase-like quaternary structure, ring helicases; 2.4A {Escherichia coli} SCOP: c.37.1.11 PDB: 1e9s_A 1gki_A* 1gl7_A* 1gl6_A*
Probab=36.91 E-value=8.1 Score=42.91 Aligned_cols=18 Identities=33% Similarity=0.560 Sum_probs=15.5
Q ss_pred cEEEEeeccCCCCccccc
Q 037169 324 NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM 341 (860)
+.-++..|+||||||.++
T Consensus 53 ~~h~~i~G~tGsGKs~~~ 70 (437)
T 1e9r_A 53 PRHLLVNGATGTGKSVLL 70 (437)
T ss_dssp GGCEEEEECTTSSHHHHH
T ss_pred cceEEEECCCCCCHHHHH
Confidence 556788999999999986
No 264
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=36.87 E-value=2.4e+02 Score=25.47 Aligned_cols=19 Identities=26% Similarity=0.417 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 037169 665 EEICSNVQRKVKELENKLK 683 (860)
Q Consensus 665 ee~~~~lq~~~~ele~~l~ 683 (860)
....+.++.++.++...|.
T Consensus 81 ~~~Vsalq~KiaeLKrqLA 99 (107)
T 2k48_A 81 RAAVSTLETKLGELKRQLA 99 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444445555555554444
No 265
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=36.54 E-value=14 Score=36.37 Aligned_cols=28 Identities=21% Similarity=0.196 Sum_probs=20.1
Q ss_pred hhHHHhhC---CccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLD---GYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~---G~N~~IfaYGqTGSGKTyTM 341 (860)
.+++.++. +....|.-.|++|||||+.+
T Consensus 9 ~l~~~~~~~~~~~~~~i~i~G~~GsGKstl~ 39 (201)
T 1rz3_A 9 FLCKTILAIKTAGRLVLGIDGLSRSGKTTLA 39 (201)
T ss_dssp HHHHHHHTSCCSSSEEEEEEECTTSSHHHHH
T ss_pred HHHHHHHHhccCCCeEEEEECCCCCCHHHHH
Confidence 35555553 34467888999999999865
No 266
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=36.53 E-value=13 Score=36.63 Aligned_cols=20 Identities=20% Similarity=0.175 Sum_probs=15.4
Q ss_pred CccEEEEeeccCCCCccccc
Q 037169 322 GYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 322 G~N~~IfaYGqTGSGKTyTM 341 (860)
+..-.|.-.|++|||||+.+
T Consensus 20 ~~g~~v~I~G~sGsGKSTl~ 39 (208)
T 3c8u_A 20 PGRQLVALSGAPGSGKSTLS 39 (208)
T ss_dssp CSCEEEEEECCTTSCTHHHH
T ss_pred CCCeEEEEECCCCCCHHHHH
Confidence 34456667899999999865
No 267
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=36.45 E-value=81 Score=24.89 Aligned_cols=35 Identities=20% Similarity=0.193 Sum_probs=15.6
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 037169 153 ELKIQCQLKTDECYEAWMSLTAANDQLEKVRMGLD 187 (860)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 187 (860)
+++.++.........+..-|+.+..+|..++.+++
T Consensus 13 ~l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkeele 47 (51)
T 3m91_A 13 QLEARIDSLAARNSKLMETLKEARQQLLALREEVD 47 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444444444444443
No 268
>2xzr_A Immunoglobulin-binding protein EIBD; cell adhesion, trimeric autotransporter adhesin, TAA; 2.80A {Enterobacteria phage p-eibd}
Probab=36.41 E-value=2.3e+02 Score=25.15 Aligned_cols=9 Identities=11% Similarity=0.169 Sum_probs=3.2
Q ss_pred HHHHHHHHH
Q 037169 646 LCRQLEKQL 654 (860)
Q Consensus 646 ~~~~le~~l 654 (860)
.+...+.++
T Consensus 63 RlnsqQrQI 71 (114)
T 2xzr_A 63 RLDSQQRQI 71 (114)
T ss_dssp HHHHHHHHH
T ss_pred HHHhHHHHH
Confidence 333333333
No 269
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=36.37 E-value=2.6e+02 Score=25.73 Aligned_cols=13 Identities=38% Similarity=0.534 Sum_probs=5.6
Q ss_pred HHHHHHHHHHHHH
Q 037169 697 KVRELENRLKART 709 (860)
Q Consensus 697 ki~~lE~kl~~~~ 709 (860)
++++++.+++.+.
T Consensus 72 ~vqeLqgEI~~Ln 84 (121)
T 3mq7_A 72 KVEELEGEITTLN 84 (121)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444433
No 270
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=36.20 E-value=9.7 Score=42.70 Aligned_cols=23 Identities=26% Similarity=0.609 Sum_probs=20.0
Q ss_pred hhCCccEEEEeeccCCCCccccc
Q 037169 319 VLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 319 ~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
+++|++..|.-.|++|+|||..|
T Consensus 26 vl~~vsf~I~lvG~sGaGKSTLl 48 (418)
T 2qag_C 26 VKRGFEFTLMVVGESGLGKSTLI 48 (418)
T ss_dssp CC-CCCEEEEEECCTTSSHHHHH
T ss_pred EecCCCEEEEEECCCCCcHHHHH
Confidence 68899999999999999999865
No 271
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=36.09 E-value=10 Score=40.62 Aligned_cols=16 Identities=38% Similarity=0.654 Sum_probs=13.3
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
+|.-.|++|||||+++
T Consensus 104 vi~lvG~nGsGKTTll 119 (304)
T 1rj9_A 104 VVLVVGVNGVGKTTTI 119 (304)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCcHHHHH
Confidence 4555699999999987
No 272
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A*
Probab=35.83 E-value=7.9 Score=38.05 Aligned_cols=17 Identities=24% Similarity=0.171 Sum_probs=14.5
Q ss_pred EEEeeccCCCCcccccc
Q 037169 326 CIFAYGQTGTGKTFTME 342 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM~ 342 (860)
.++-||+.|||||+.+.
T Consensus 5 i~vi~G~~gsGKTT~ll 21 (184)
T 2orw_A 5 LTVITGPMYSGKTTELL 21 (184)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 56789999999999863
No 273
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=35.80 E-value=8.6 Score=37.98 Aligned_cols=16 Identities=25% Similarity=0.474 Sum_probs=13.5
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.+.-.|++|||||.+|
T Consensus 6 ~i~lvGpsGaGKSTLl 21 (198)
T 1lvg_A 6 PVVLSGPSGAGKSTLL 21 (198)
T ss_dssp CEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4567899999999977
No 274
>2oca_A DAR protein, ATP-dependent DNA helicase UVSW; ATP-dependant helicase, T4-bacteriophage, recombination, hydrolase; 2.70A {Enterobacteria phage T4}
Probab=35.78 E-value=9.4 Score=43.04 Aligned_cols=27 Identities=15% Similarity=0.036 Sum_probs=20.4
Q ss_pred hhHHHhhCCccEEEEeeccCCCCcccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM~ 342 (860)
..|..++.|.++ +..|+||||||.+..
T Consensus 120 ~ai~~~~~~~~~--ll~~~tGsGKT~~~~ 146 (510)
T 2oca_A 120 DAVFEGLVNRRR--ILNLPTSAGRSLIQA 146 (510)
T ss_dssp HHHHHHHHHSEE--EEECCSTTTHHHHHH
T ss_pred HHHHHHHhcCCc--EEEeCCCCCHHHHHH
Confidence 456667777654 567999999999863
No 275
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=35.74 E-value=10 Score=36.90 Aligned_cols=16 Identities=31% Similarity=0.393 Sum_probs=13.4
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|.-.|++|||||+.+
T Consensus 8 ~i~l~G~~GsGKSTl~ 23 (207)
T 2j41_A 8 LIVLSGPSGVGKGTVR 23 (207)
T ss_dssp EEEEECSTTSCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5667899999999865
No 276
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=35.46 E-value=2e+02 Score=24.25 Aligned_cols=37 Identities=16% Similarity=0.222 Sum_probs=15.0
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhh
Q 037169 150 RIKELKIQCQLKTDECYEAWMSLTAANDQLEKVRMGL 186 (860)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 186 (860)
+++++..+.+...+....+...|+.+..+=++++.+|
T Consensus 8 kLq~~E~~N~~Le~~v~~le~~Le~s~~~q~~~~~El 44 (72)
T 3cve_A 8 KLQEVEIRNKDLEGQLSEMEQRLEKSQSEQDAFRSNL 44 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444443333333333
No 277
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=35.38 E-value=8 Score=44.41 Aligned_cols=26 Identities=27% Similarity=0.465 Sum_probs=20.9
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..|..+++|.++. ..++||||||.+.
T Consensus 32 ~~i~~il~g~d~l--v~apTGsGKTl~~ 57 (523)
T 1oyw_A 32 EIIDTVLSGRDCL--VVMPTGGGKSLCY 57 (523)
T ss_dssp HHHHHHHTTCCEE--EECSCHHHHHHHH
T ss_pred HHHHHHHcCCCEE--EECCCCcHHHHHH
Confidence 5778889998764 4579999999854
No 278
>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A
Probab=35.35 E-value=2.7e+02 Score=25.70 Aligned_cols=14 Identities=14% Similarity=0.446 Sum_probs=5.3
Q ss_pred HHHHHHHHHHHHHH
Q 037169 723 IAELEEKLRKKEEY 736 (860)
Q Consensus 723 i~eLe~kl~~Qeeq 736 (860)
+++|+.+++.|++.
T Consensus 84 ~keLd~~ik~qeki 97 (119)
T 3etw_A 84 LKKLEAEMEQQKAV 97 (119)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 279
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=35.20 E-value=12 Score=39.94 Aligned_cols=17 Identities=35% Similarity=0.575 Sum_probs=14.5
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
.++.-.|++|||||+|+
T Consensus 101 ~vi~lvG~nGsGKTTll 117 (302)
T 3b9q_A 101 AVIMIVGVNGGGKTTSL 117 (302)
T ss_dssp EEEEEECCTTSCHHHHH
T ss_pred cEEEEEcCCCCCHHHHH
Confidence 35677899999999987
No 280
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=35.12 E-value=10 Score=37.07 Aligned_cols=15 Identities=40% Similarity=0.616 Sum_probs=12.7
Q ss_pred EEeeccCCCCccccc
Q 037169 327 IFAYGQTGTGKTFTM 341 (860)
Q Consensus 327 IfaYGqTGSGKTyTM 341 (860)
+.-.|++|||||+.+
T Consensus 3 i~l~G~nGsGKTTLl 17 (178)
T 1ye8_A 3 IIITGEPGVGKTTLV 17 (178)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 456899999999976
No 281
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=35.09 E-value=10 Score=40.34 Aligned_cols=24 Identities=29% Similarity=0.625 Sum_probs=16.7
Q ss_pred HhhCCccEEEEeeccCCCCccccc
Q 037169 318 SVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 318 ~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
.+++|++..|...|++|+|||..|
T Consensus 12 ~~l~~~~~~I~lvG~nG~GKSTLl 35 (301)
T 2qnr_A 12 SVKKGFEFTLMVVGESGLGKSTLI 35 (301)
T ss_dssp ------CEEEEEEEETTSSHHHHH
T ss_pred EEEcCCCEEEEEECCCCCCHHHHH
Confidence 367899999999999999999866
No 282
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=34.96 E-value=1.9e+02 Score=24.14 Aligned_cols=11 Identities=18% Similarity=0.217 Sum_probs=4.0
Q ss_pred HHHHHHHHHHH
Q 037169 631 EKINELESQLE 641 (860)
Q Consensus 631 ~k~~ele~~l~ 641 (860)
.++.+-+.+++
T Consensus 10 ~kl~~Kq~EI~ 20 (74)
T 2q6q_A 10 FKLREKQNEIF 20 (74)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 283
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A*
Probab=34.94 E-value=9.9 Score=43.46 Aligned_cols=20 Identities=40% Similarity=0.536 Sum_probs=16.3
Q ss_pred CccEEEEeeccCCCCccccc
Q 037169 322 GYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 322 G~N~~IfaYGqTGSGKTyTM 341 (860)
.....|+-||++|+|||+..
T Consensus 236 ~~~~~vLL~GppGtGKT~lA 255 (489)
T 3hu3_A 236 KPPRGILLYGPPGTGKTLIA 255 (489)
T ss_dssp CCCCEEEEECSTTSSHHHHH
T ss_pred CCCCcEEEECcCCCCHHHHH
Confidence 34456899999999999865
No 284
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=34.73 E-value=10 Score=36.51 Aligned_cols=16 Identities=31% Similarity=0.426 Sum_probs=13.5
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|.-.|++|||||+++
T Consensus 4 ii~l~G~~GaGKSTl~ 19 (189)
T 2bdt_A 4 LYIITGPAGVGKSTTC 19 (189)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCcHHHHH
Confidence 4667899999999976
No 285
>4a4z_A Antiviral helicase SKI2; hydrolase, ATPase, mRNA degradation, exosome; HET: ANP; 2.40A {Saccharomyces cerevisiae} PDB: 4a4k_A
Probab=34.66 E-value=15 Score=45.88 Aligned_cols=25 Identities=28% Similarity=0.399 Sum_probs=20.1
Q ss_pred hhHHHhhCCccEEEEeeccCCCCcccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFT 340 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyT 340 (860)
..|..++.|.+ ++..|+||||||.+
T Consensus 46 ~aI~~il~g~~--vlv~apTGsGKTlv 70 (997)
T 4a4z_A 46 EAVYHLEQGDS--VFVAAHTSAGKTVV 70 (997)
T ss_dssp HHHHHHHTTCE--EEEECCTTSCSHHH
T ss_pred HHHHHHHcCCC--EEEEECCCCcHHHH
Confidence 46777888875 67799999999954
No 286
>3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain, PIN-tower interface, coupling hydrolysis to DNA unwinding, ssDNA; 3.30A {Enterobacteria phage T4}
Probab=34.51 E-value=15 Score=41.36 Aligned_cols=17 Identities=29% Similarity=0.317 Sum_probs=15.1
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..++..|..|||||+++
T Consensus 46 ~~~li~G~aGTGKT~ll 62 (459)
T 3upu_A 46 HHVTINGPAGTGATTLT 62 (459)
T ss_dssp CEEEEECCTTSCHHHHH
T ss_pred CEEEEEeCCCCCHHHHH
Confidence 47889999999999876
No 287
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=33.97 E-value=12 Score=37.42 Aligned_cols=16 Identities=25% Similarity=0.333 Sum_probs=9.2
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|.-.|++|||||.++
T Consensus 29 ii~l~Gp~GsGKSTl~ 44 (231)
T 3lnc_A 29 ILVLSSPSGCGKTTVA 44 (231)
T ss_dssp EEEEECSCC----CHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4556799999999876
No 288
>3lfu_A DNA helicase II; SF1 helicase, ATP-binding, DNA damage, DNA REP replication, DNA-binding, hydrolase, nucleotide-B SOS response; HET: DNA; 1.80A {Escherichia coli} PDB: 2is6_A* 2is2_A* 2is1_A* 2is4_A*
Probab=33.93 E-value=9.1 Score=44.59 Aligned_cols=26 Identities=15% Similarity=0.253 Sum_probs=19.6
Q ss_pred HHhhCCccEEEEeeccCCCCcccccc
Q 037169 317 TSVLDGYNVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 317 ~~~l~G~N~~IfaYGqTGSGKTyTM~ 342 (860)
..++.-.++.++..|..|||||+|+.
T Consensus 15 ~~av~~~~~~~lV~a~aGsGKT~~l~ 40 (647)
T 3lfu_A 15 REAVAAPRSNLLVLAGAGSGKTRVLV 40 (647)
T ss_dssp HHHHTCCSSCEEEEECTTSCHHHHHH
T ss_pred HHHHhCCCCCEEEEECCCCCHHHHHH
Confidence 34444445667889999999999984
No 289
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=33.90 E-value=11 Score=36.00 Aligned_cols=16 Identities=38% Similarity=0.412 Sum_probs=13.6
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|+..|.+|||||+..
T Consensus 13 ~i~i~G~~GsGKst~~ 28 (180)
T 3iij_A 13 NILLTGTPGVGKTTLG 28 (180)
T ss_dssp CEEEECSTTSSHHHHH
T ss_pred eEEEEeCCCCCHHHHH
Confidence 5778999999999854
No 290
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=33.57 E-value=16 Score=35.85 Aligned_cols=19 Identities=26% Similarity=0.454 Sum_probs=15.2
Q ss_pred ccEEEEeeccCCCCccccc
Q 037169 323 YNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 323 ~N~~IfaYGqTGSGKTyTM 341 (860)
....|+-.|++|||||+.+
T Consensus 24 ~g~~i~l~G~sGsGKSTl~ 42 (200)
T 3uie_A 24 KGCVIWVTGLSGSGKSTLA 42 (200)
T ss_dssp CCEEEEEECSTTSSHHHHH
T ss_pred CCeEEEEECCCCCCHHHHH
Confidence 3456778899999999865
No 291
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=33.56 E-value=5.6e+02 Score=28.85 Aligned_cols=18 Identities=11% Similarity=0.244 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 037169 602 DDVIQKLEENFQNLEVKA 619 (860)
Q Consensus 602 ~~~i~~le~~~~~l~~~~ 619 (860)
...|.+|...+..+....
T Consensus 64 ~~rI~kLkn~L~~~s~s~ 81 (491)
T 1m1j_A 64 SQRIDNIRQQLADSQNKY 81 (491)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 345566666665554433
No 292
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=33.48 E-value=11 Score=37.63 Aligned_cols=18 Identities=39% Similarity=0.481 Sum_probs=14.3
Q ss_pred EEEEeeccCCCCcccccc
Q 037169 325 VCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM~ 342 (860)
..+.-.|++|||||+.+.
T Consensus 31 ~~~~l~GpnGsGKSTLl~ 48 (251)
T 2ehv_A 31 TTVLLTGGTGTGKTTFAA 48 (251)
T ss_dssp CEEEEECCTTSSHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHH
Confidence 345568999999999873
No 293
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=33.46 E-value=2.8e+02 Score=25.33 Aligned_cols=34 Identities=21% Similarity=0.144 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 037169 694 LHHKVRELENRLKARTQEFEVHSGMLQQKIAELE 727 (860)
Q Consensus 694 le~ki~~lE~kl~~~~~~~e~~~~~lq~qi~eLe 727 (860)
|..++...|..++.+++.|..-....+.++..|-
T Consensus 50 L~~~~q~sE~~L~~Lqq~fsq~q~~vq~qL~~Lt 83 (112)
T 1x79_B 50 LVLRAQASEILLEELQQGLSQAKRDVQEQMAVLM 83 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444555555555444444444444433
No 294
>4a2q_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.40A {Anas platyrhynchos}
Probab=33.33 E-value=15 Score=44.21 Aligned_cols=26 Identities=35% Similarity=0.603 Sum_probs=20.8
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.|+ +..++||||||.+.
T Consensus 255 ~~i~~~l~~~~~--ll~~~TGsGKTl~~ 280 (797)
T 4a2q_A 255 ELAQPAINGKNA--LICAPTGSGKTFVS 280 (797)
T ss_dssp HHHHHHHTTCCE--EEECCTTSCHHHHH
T ss_pred HHHHHHHhCCCE--EEEeCCCChHHHHH
Confidence 467778899874 56789999999875
No 295
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=33.24 E-value=2.4e+02 Score=24.53 Aligned_cols=8 Identities=25% Similarity=0.422 Sum_probs=2.9
Q ss_pred HHHHHHHH
Q 037169 724 AELEEKLR 731 (860)
Q Consensus 724 ~eLe~kl~ 731 (860)
..++.++.
T Consensus 89 ~~~~~~l~ 96 (107)
T 1fxk_A 89 ERVMKKLQ 96 (107)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 296
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=33.19 E-value=11 Score=40.12 Aligned_cols=16 Identities=50% Similarity=0.821 Sum_probs=13.2
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|...|++|+|||+|+
T Consensus 107 vi~lvG~~GsGKTTl~ 122 (296)
T 2px0_A 107 YIVLFGSTGAGKTTTL 122 (296)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4455699999999997
No 297
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=32.82 E-value=2.2e+02 Score=25.67 Aligned_cols=16 Identities=31% Similarity=0.289 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHHH
Q 037169 224 AMNELERKILIWKEEH 239 (860)
Q Consensus 224 ~~~~~~~~~~~~~~e~ 239 (860)
....+|.++++++...
T Consensus 83 ~Vsalq~KiaeLKrqL 98 (107)
T 2k48_A 83 AVSTLETKLGELKRQL 98 (107)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444455555554443
No 298
>4a2w_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.70A {Anas platyrhynchos}
Probab=32.75 E-value=15 Score=45.31 Aligned_cols=26 Identities=35% Similarity=0.603 Sum_probs=20.9
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.|+ +..++||||||.+.
T Consensus 255 ~ai~~il~g~~~--ll~a~TGsGKTl~~ 280 (936)
T 4a2w_A 255 ELAQPAINGKNA--LICAPTGSGKTFVS 280 (936)
T ss_dssp HHHHHHHTTCCE--EEECCTTSCHHHHH
T ss_pred HHHHHHHcCCCE--EEEeCCCchHHHHH
Confidence 467778899885 56789999999875
No 299
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=32.54 E-value=12 Score=42.88 Aligned_cols=17 Identities=35% Similarity=0.558 Sum_probs=15.0
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
-.++-||++|+|||++.
T Consensus 78 ~~lLL~GppGtGKTtla 94 (516)
T 1sxj_A 78 RAAMLYGPPGIGKTTAA 94 (516)
T ss_dssp SEEEEECSTTSSHHHHH
T ss_pred cEEEEECCCCCCHHHHH
Confidence 57888999999999976
No 300
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=32.53 E-value=13 Score=36.36 Aligned_cols=16 Identities=44% Similarity=0.470 Sum_probs=13.7
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|+-.|++|||||+..
T Consensus 27 ~i~l~G~~GsGKsTl~ 42 (199)
T 3vaa_A 27 RIFLTGYMGAGKTTLG 42 (199)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEEcCCCCCHHHHH
Confidence 5788999999999854
No 301
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=32.21 E-value=5.9e+02 Score=28.97 Aligned_cols=34 Identities=12% Similarity=0.019 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 037169 145 AKCEKRIKELKIQCQLKTDECYEAWMSLTAANDQ 178 (860)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (860)
+.|..++.+++...+.+..+........+.-|++
T Consensus 12 a~yq~elarvqkana~aka~Ye~~~ae~~a~n~~ 45 (497)
T 3iox_A 12 TAYQTELARVQKANADAKAAYEAAVAANNAANAA 45 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 4466666666666666555555555555544443
No 302
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=32.19 E-value=12 Score=39.96 Aligned_cols=18 Identities=28% Similarity=0.335 Sum_probs=15.3
Q ss_pred cEEEEeeccCCCCccccc
Q 037169 324 NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM 341 (860)
...++-||+.|+|||+++
T Consensus 38 ~~~~ll~G~~G~GKT~la 55 (373)
T 1jr3_A 38 HHAYLFSGTRGVGKTSIA 55 (373)
T ss_dssp CSEEEEESCTTSSHHHHH
T ss_pred CeEEEEECCCCCCHHHHH
Confidence 346789999999999976
No 303
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=32.17 E-value=13 Score=35.35 Aligned_cols=17 Identities=24% Similarity=0.366 Sum_probs=14.1
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-.|+.|||||+..
T Consensus 4 ~~I~i~G~~GsGKsT~~ 20 (192)
T 1kht_A 4 KVVVVTGVPGVGSTTSS 20 (192)
T ss_dssp CEEEEECCTTSCHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 36888999999999853
No 304
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=32.17 E-value=12 Score=39.08 Aligned_cols=19 Identities=32% Similarity=0.627 Sum_probs=15.5
Q ss_pred ccEEEEeeccCCCCccccc
Q 037169 323 YNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 323 ~N~~IfaYGqTGSGKTyTM 341 (860)
|+-++...|++|+|||..|
T Consensus 1 f~f~v~lvG~nGaGKSTLl 19 (270)
T 3sop_A 1 FDFNIMVVGQSGLGKSTLV 19 (270)
T ss_dssp CEEEEEEEESSSSSHHHHH
T ss_pred CeeEEEEECCCCCCHHHHH
Confidence 3456778899999999876
No 305
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=32.08 E-value=12 Score=36.89 Aligned_cols=21 Identities=19% Similarity=0.319 Sum_probs=14.2
Q ss_pred hhCCccEEEEeeccCCCCccccc
Q 037169 319 VLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 319 ~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
+-.|. ++.-.|++|||||.++
T Consensus 17 i~~Ge--i~~l~GpnGsGKSTLl 37 (207)
T 1znw_A 17 AAVGR--VVVLSGPSAVGKSTVV 37 (207)
T ss_dssp --CCC--EEEEECSTTSSHHHHH
T ss_pred CCCCC--EEEEECCCCCCHHHHH
Confidence 34454 3445699999999876
No 306
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=31.95 E-value=4.6e+02 Score=27.34 Aligned_cols=11 Identities=36% Similarity=0.474 Sum_probs=4.3
Q ss_pred HHHHHHHHHHH
Q 037169 698 VRELENRLKAR 708 (860)
Q Consensus 698 i~~lE~kl~~~ 708 (860)
++++..++.-+
T Consensus 178 ~eeLr~~L~p~ 188 (273)
T 3s84_A 178 AEELRQRLAPL 188 (273)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33444443333
No 307
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=31.84 E-value=1.6e+02 Score=27.24 Aligned_cols=21 Identities=19% Similarity=0.468 Sum_probs=11.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 037169 664 KEEICSNVQRKVKELENKLKE 684 (860)
Q Consensus 664 ~ee~~~~lq~~~~ele~~l~~ 684 (860)
.+..+..|+.++..+...+..
T Consensus 13 rD~~Ie~Lkreie~lk~ele~ 33 (120)
T 3i00_A 13 KDHLIERLYREISGLKAQLEN 33 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344555566666655554443
No 308
>2v6i_A RNA helicase; membrane, hydrolase, transmembrane, RNA replication, viral replication, nucleotide-binding; 2.10A {Kokobera virus} PDB: 2v6j_A
Probab=31.82 E-value=16 Score=40.78 Aligned_cols=16 Identities=25% Similarity=0.181 Sum_probs=13.7
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
-++..|+||||||...
T Consensus 4 ~~lv~a~TGsGKT~~~ 19 (431)
T 2v6i_A 4 LTVLDLHPGAGKTRRV 19 (431)
T ss_dssp EEEEECCTTSCTTTTH
T ss_pred EEEEEcCCCCCHHHHH
Confidence 4678999999999984
No 309
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=31.72 E-value=2.7e+02 Score=24.57 Aligned_cols=17 Identities=29% Similarity=0.409 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHHHHH
Q 037169 720 QQKIAELEEKLRKKEEY 736 (860)
Q Consensus 720 q~qi~eLe~kl~~Qeeq 736 (860)
..++..++.++...+.+
T Consensus 84 ~~~i~~l~~~~~~l~~~ 100 (112)
T 1l8d_A 84 IDRKSELERELRRIDME 100 (112)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33344444444433333
No 310
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=31.66 E-value=13 Score=38.17 Aligned_cols=15 Identities=40% Similarity=0.465 Sum_probs=12.8
Q ss_pred EEEeeccCCCCcccc
Q 037169 326 CIFAYGQTGTGKTFT 340 (860)
Q Consensus 326 ~IfaYGqTGSGKTyT 340 (860)
.|+-.|++|||||..
T Consensus 3 li~I~G~~GSGKSTl 17 (253)
T 2ze6_A 3 LHLIYGPTCSGKTDM 17 (253)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCcCHHHH
Confidence 477899999999973
No 311
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=31.57 E-value=2.7e+02 Score=24.44 Aligned_cols=28 Identities=18% Similarity=0.299 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 037169 221 WIIAMNELERKILIWKEEHSQLAREAHE 248 (860)
Q Consensus 221 ~~~~~~~~~~~~~~~~~e~~~l~~e~~~ 248 (860)
+...|..|..++..+..+..++.-+...
T Consensus 54 ye~~i~~Lr~~i~~~~~ek~~l~~e~dn 81 (93)
T 3s4r_A 54 YEEEMRELRRQVDQLTNDKARVEVERDN 81 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445566666666666666555555444
No 312
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=31.01 E-value=14 Score=34.47 Aligned_cols=16 Identities=19% Similarity=0.005 Sum_probs=13.4
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|+-.|..|||||+..
T Consensus 3 ~i~l~G~~GsGKsT~~ 18 (173)
T 3kb2_A 3 LIILEGPDCCFKSTVA 18 (173)
T ss_dssp EEEEECSSSSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4778899999999854
No 313
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=30.72 E-value=11 Score=40.60 Aligned_cols=19 Identities=42% Similarity=0.616 Sum_probs=14.8
Q ss_pred CCccEEEEeeccCCCCccccc
Q 037169 321 DGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 321 ~G~N~~IfaYGqTGSGKTyTM 341 (860)
.|.+ +.-.|+||||||+++
T Consensus 170 ~g~~--v~i~G~~GsGKTTll 188 (330)
T 2pt7_A 170 IGKN--VIVCGGTGSGKTTYI 188 (330)
T ss_dssp HTCC--EEEEESTTSCHHHHH
T ss_pred CCCE--EEEECCCCCCHHHHH
Confidence 4654 455699999999987
No 314
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=30.63 E-value=17 Score=35.12 Aligned_cols=21 Identities=24% Similarity=0.268 Sum_probs=16.3
Q ss_pred CCccEEEEeeccCCCCccccc
Q 037169 321 DGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 321 ~G~N~~IfaYGqTGSGKTyTM 341 (860)
.+....|.-.|++|||||+..
T Consensus 5 ~~~~~~I~i~G~~GsGKST~~ 25 (203)
T 1uf9_A 5 AKHPIIIGITGNIGSGKSTVA 25 (203)
T ss_dssp -CCCEEEEEEECTTSCHHHHH
T ss_pred ccCceEEEEECCCCCCHHHHH
Confidence 455667889999999999753
No 315
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=30.62 E-value=1e+02 Score=26.39 Aligned_cols=10 Identities=40% Similarity=0.723 Sum_probs=4.0
Q ss_pred HHHHHHHHHH
Q 037169 632 KINELESQLE 641 (860)
Q Consensus 632 k~~ele~~l~ 641 (860)
++.+||.++.
T Consensus 15 Ri~~LE~klA 24 (78)
T 3efg_A 15 RLVELETRLS 24 (78)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3344444443
No 316
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=30.59 E-value=16 Score=39.50 Aligned_cols=18 Identities=39% Similarity=0.517 Sum_probs=15.4
Q ss_pred cEEEEeeccCCCCccccc
Q 037169 324 NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM 341 (860)
...|.-.|++|||||+|+
T Consensus 129 g~vi~lvG~nGaGKTTll 146 (328)
T 3e70_C 129 PYVIMFVGFNGSGKTTTI 146 (328)
T ss_dssp SEEEEEECCTTSSHHHHH
T ss_pred CeEEEEECCCCCCHHHHH
Confidence 456778899999999987
No 317
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=30.57 E-value=11 Score=37.67 Aligned_cols=17 Identities=18% Similarity=0.124 Sum_probs=14.5
Q ss_pred EEEeeccCCCCcccccc
Q 037169 326 CIFAYGQTGTGKTFTME 342 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM~ 342 (860)
.+|-||+.|||||..+.
T Consensus 10 i~v~~G~mgsGKTT~ll 26 (191)
T 1xx6_A 10 VEVIVGPMYSGKSEELI 26 (191)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCcHHHHHH
Confidence 67889999999998764
No 318
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=30.55 E-value=12 Score=37.09 Aligned_cols=16 Identities=38% Similarity=0.627 Sum_probs=13.6
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.+.-.|++|||||+++
T Consensus 3 ~i~i~G~nG~GKTTll 18 (189)
T 2i3b_A 3 HVFLTGPPGVGKTTLI 18 (189)
T ss_dssp CEEEESCCSSCHHHHH
T ss_pred EEEEECCCCChHHHHH
Confidence 4567899999999987
No 319
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=30.29 E-value=15 Score=44.03 Aligned_cols=31 Identities=19% Similarity=0.204 Sum_probs=23.0
Q ss_pred chhhHHHhhCCccEEEEeeccCCCCcccccc
Q 037169 312 ASPLVTSVLDGYNVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 312 v~plV~~~l~G~N~~IfaYGqTGSGKTyTM~ 342 (860)
+..+++.+.......++-||++|+|||+.+.
T Consensus 195 i~~l~~~l~~~~~~~vlL~G~~GtGKT~la~ 225 (758)
T 1r6b_X 195 LERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 (758)
T ss_dssp HHHHHHHHTSSSSCEEEEECCTTSSHHHHHH
T ss_pred HHHHHHHHhccCCCCeEEEcCCCCCHHHHHH
Confidence 4455665555566667889999999999763
No 320
>2z83_A Helicase/nucleoside triphosphatase; hydrolase, membrane, nucleotide-binding, RNA replication, transmembrane, viral protein; 1.80A {Japanese encephalitis virus} PDB: 2v8o_A 2qeq_A
Probab=29.91 E-value=17 Score=40.82 Aligned_cols=16 Identities=25% Similarity=0.237 Sum_probs=13.1
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.++..|+||||||...
T Consensus 23 ~vlv~a~TGsGKT~~~ 38 (459)
T 2z83_A 23 MTVLDLHPGSGKTRKI 38 (459)
T ss_dssp EEEECCCTTSCTTTTH
T ss_pred cEEEECCCCCCHHHHH
Confidence 3567899999999983
No 321
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=29.90 E-value=15 Score=34.72 Aligned_cols=16 Identities=38% Similarity=0.519 Sum_probs=13.4
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|+-.|+.|||||+..
T Consensus 6 ~i~l~G~~GsGKSTl~ 21 (173)
T 1kag_A 6 NIFLVGPMGAGKSTIG 21 (173)
T ss_dssp CEEEECCTTSCHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 4778999999999854
No 322
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=29.85 E-value=14 Score=34.95 Aligned_cols=17 Identities=24% Similarity=0.352 Sum_probs=14.1
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-.|+.|||||+.+
T Consensus 9 ~~i~l~G~~GsGKSTl~ 25 (175)
T 1knq_A 9 HIYVLMGVSGSGKSAVA 25 (175)
T ss_dssp EEEEEECSTTSCHHHHH
T ss_pred cEEEEEcCCCCCHHHHH
Confidence 46778899999999864
No 323
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=29.76 E-value=17 Score=39.98 Aligned_cols=17 Identities=35% Similarity=0.575 Sum_probs=14.6
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
.+|.-.|++|||||+|+
T Consensus 158 ~vi~lvG~nGsGKTTll 174 (359)
T 2og2_A 158 AVIMIVGVNGGGKTTSL 174 (359)
T ss_dssp EEEEEECCTTSCHHHHH
T ss_pred eEEEEEcCCCChHHHHH
Confidence 45677899999999987
No 324
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=29.75 E-value=18 Score=43.37 Aligned_cols=16 Identities=38% Similarity=0.453 Sum_probs=14.4
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|+-||+||+|||++.
T Consensus 523 ~~Ll~Gp~GtGKT~lA 538 (758)
T 3pxi_A 523 SFIFLGPTGVGKTELA 538 (758)
T ss_dssp EEEEESCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 7899999999999865
No 325
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA degradation, allosteric REGU; HET: ADP 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=29.54 E-value=17 Score=44.22 Aligned_cols=26 Identities=38% Similarity=0.441 Sum_probs=18.8
Q ss_pred hHHHhhCCccEEEEeeccCCCCcccccc
Q 037169 315 LVTSVLDGYNVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 315 lV~~~l~G~N~~IfaYGqTGSGKTyTM~ 342 (860)
.|..++.+ ..++..|+.|||||+|+.
T Consensus 368 Av~~~l~~--~~~lI~GppGTGKT~~i~ 393 (802)
T 2xzl_A 368 AVSHVLQR--PLSLIQGPPGTGKTVTSA 393 (802)
T ss_dssp HHHHHTTC--SEEEEECSTTSSHHHHHH
T ss_pred HHHHHhcC--CCEEEECCCCCCHHHHHH
Confidence 35555543 345679999999999974
No 326
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=29.50 E-value=13 Score=37.39 Aligned_cols=15 Identities=27% Similarity=0.530 Sum_probs=12.3
Q ss_pred EEeeccCCCCccccc
Q 037169 327 IFAYGQTGTGKTFTM 341 (860)
Q Consensus 327 IfaYGqTGSGKTyTM 341 (860)
+.-.|++|||||..+
T Consensus 26 ~~lvGpsGsGKSTLl 40 (218)
T 1z6g_A 26 LVICGPSGVGKGTLI 40 (218)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 345699999999876
No 327
>2wjy_A Regulator of nonsense transcripts 1; nonsense mediated decay, zinc-finger, ATP-binding, metal-BIN UPF2, UPF1, helicase, hydrolase; 2.50A {Homo sapiens} PDB: 2wjv_A 2iyk_A
Probab=29.46 E-value=18 Score=44.04 Aligned_cols=26 Identities=38% Similarity=0.445 Sum_probs=19.0
Q ss_pred hHHHhhCCccEEEEeeccCCCCcccccc
Q 037169 315 LVTSVLDGYNVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 315 lV~~~l~G~N~~IfaYGqTGSGKTyTM~ 342 (860)
.|..++.+ ..++..|+.|||||+|+.
T Consensus 364 Av~~~l~~--~~~lI~GppGTGKT~ti~ 389 (800)
T 2wjy_A 364 AVKTVLQR--PLSLIQGPPGTGKTVTSA 389 (800)
T ss_dssp HHHHHHTS--SEEEEECCTTSCHHHHHH
T ss_pred HHHHhccC--CeEEEEcCCCCCHHHHHH
Confidence 44555553 346779999999999974
No 328
>1gku_B Reverse gyrase, TOP-RG; topoisomerase, DNA supercoiling, archaea, helicase; 2.7A {Archaeoglobus fulgidus} SCOP: c.37.1.16 c.37.1.16 e.10.1.1 PDB: 1gl9_B*
Probab=29.45 E-value=20 Score=44.87 Aligned_cols=24 Identities=29% Similarity=0.252 Sum_probs=18.9
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTF 339 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTy 339 (860)
..+..+++|.|+ ++.|+||||||.
T Consensus 63 ~ai~~il~g~dv--lv~apTGSGKTl 86 (1054)
T 1gku_B 63 MWAKRILRKESF--AATAPTGVGKTS 86 (1054)
T ss_dssp HHHHHHHTTCCE--ECCCCBTSCSHH
T ss_pred HHHHHHHhCCCE--EEEcCCCCCHHH
Confidence 356678889774 678999999994
No 329
>3e1s_A Exodeoxyribonuclease V, subunit RECD; alpha and beta protein, ATP-binding, nucleotide-binding, HYD; 2.20A {Deinococcus radiodurans} PDB: 3gp8_A 3gpl_A*
Probab=29.39 E-value=18 Score=42.26 Aligned_cols=27 Identities=22% Similarity=0.336 Sum_probs=19.6
Q ss_pred hhHHHhhCCccEEEEeeccCCCCcccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM~ 342 (860)
..|..++.+ ..++-.|+.|||||+|+.
T Consensus 196 ~Av~~~~~~--~~~~I~G~pGTGKTt~i~ 222 (574)
T 3e1s_A 196 SVLDQLAGH--RLVVLTGGPGTGKSTTTK 222 (574)
T ss_dssp HHHHHHTTC--SEEEEECCTTSCHHHHHH
T ss_pred HHHHHHHhC--CEEEEEcCCCCCHHHHHH
Confidence 355666654 456678999999999873
No 330
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X*
Probab=29.38 E-value=13 Score=35.45 Aligned_cols=16 Identities=25% Similarity=0.283 Sum_probs=13.6
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
+..-+|++|||||..+
T Consensus 28 ~~~i~G~NGsGKStll 43 (182)
T 3kta_A 28 FTAIVGANGSGKSNIG 43 (182)
T ss_dssp EEEEEECTTSSHHHHH
T ss_pred cEEEECCCCCCHHHHH
Confidence 5568999999999865
No 331
>1yks_A Genome polyprotein [contains: flavivirin protease NS3 catalytic subunit]; helicase, flavivirus, DEAD-BOX, ATPase, rtpase, hydrolase; 1.80A {Yellow fever virus} SCOP: c.37.1.14 c.37.1.14 PDB: 1ymf_A*
Probab=29.29 E-value=18 Score=40.52 Aligned_cols=21 Identities=24% Similarity=0.262 Sum_probs=16.2
Q ss_pred hhCCccEEEEeeccCCCCccccc
Q 037169 319 VLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 319 ~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
++.|.| ++..|+||||||...
T Consensus 5 l~~g~~--vlv~a~TGSGKT~~~ 25 (440)
T 1yks_A 5 LKKGMT--TVLDFHPGAGKTRRF 25 (440)
T ss_dssp TSTTCE--EEECCCTTSSTTTTH
T ss_pred hhCCCC--EEEEcCCCCCHHHHH
Confidence 455666 467899999999984
No 332
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=29.08 E-value=2e+02 Score=23.94 Aligned_cols=57 Identities=12% Similarity=0.174 Sum_probs=0.0
Q ss_pred hhhHHHHh--hhhHHH-HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 037169 133 PAQDKLMR--MKSMAK-CEKRIKELKIQCQLKTDECYEAWMSLTAANDQLEKVRMGLDNK 189 (860)
Q Consensus 133 ~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 189 (860)
.+++.+++ +.+++. |..++++|......-.++......++.+++..+..+..+|+.+
T Consensus 16 aQYE~ia~knr~EaE~~y~~k~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~sl 75 (77)
T 3trt_A 16 QQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESTEYRRQVQSLTMEVDAL 75 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
No 333
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=28.96 E-value=1.9e+02 Score=24.73 Aligned_cols=19 Identities=11% Similarity=0.384 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 037169 694 LHHKVRELENRLKARTQEF 712 (860)
Q Consensus 694 le~ki~~lE~kl~~~~~~~ 712 (860)
++..+..+|..+...+.+.
T Consensus 31 ~q~~i~~lE~eL~~~r~e~ 49 (84)
T 1gk4_A 31 YQDTIGRLQDEIQNMKEEM 49 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444454444444433
No 334
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A*
Probab=28.86 E-value=17 Score=34.37 Aligned_cols=16 Identities=31% Similarity=0.511 Sum_probs=13.3
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
...-+|++|||||..|
T Consensus 25 ~~~I~G~NGsGKStil 40 (149)
T 1f2t_A 25 INLIIGQNGSGKSSLL 40 (149)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 4567999999999865
No 335
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=28.79 E-value=14 Score=42.48 Aligned_cols=16 Identities=31% Similarity=0.503 Sum_probs=14.3
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|+-||++|||||+.+
T Consensus 66 GvLL~GppGtGKTtLa 81 (499)
T 2dhr_A 66 GVLLVGPPGVGKTHLA 81 (499)
T ss_dssp EEEEECSSSSSHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 3899999999999876
No 336
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=28.67 E-value=22 Score=42.54 Aligned_cols=17 Identities=35% Similarity=0.366 Sum_probs=15.2
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
+.++-||++|+|||++.
T Consensus 489 ~~~ll~G~~GtGKT~la 505 (758)
T 1r6b_X 489 GSFLFAGPTGVGKTEVT 505 (758)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eEEEEECCCCCcHHHHH
Confidence 57899999999999875
No 337
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=28.53 E-value=16 Score=34.95 Aligned_cols=17 Identities=35% Similarity=0.395 Sum_probs=14.6
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-.|..|||||+..
T Consensus 6 ~~I~l~G~~GsGKST~~ 22 (193)
T 2rhm_A 6 ALIIVTGHPATGKTTLS 22 (193)
T ss_dssp EEEEEEESTTSSHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 46889999999999854
No 338
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=28.45 E-value=17 Score=34.69 Aligned_cols=17 Identities=29% Similarity=0.598 Sum_probs=14.0
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-.|..|||||+..
T Consensus 4 ~~I~l~G~~GsGKsT~a 20 (196)
T 1tev_A 4 LVVFVLGGPGAGKGTQC 20 (196)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 35788999999999853
No 339
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=28.44 E-value=17 Score=34.66 Aligned_cols=16 Identities=25% Similarity=0.455 Sum_probs=13.6
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|+-.|..|||||+..
T Consensus 6 ~I~l~G~~GsGKST~~ 21 (186)
T 3cm0_A 6 AVIFLGPPGAGKGTQA 21 (186)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5788999999999854
No 340
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=28.31 E-value=19 Score=43.20 Aligned_cols=30 Identities=17% Similarity=0.168 Sum_probs=22.3
Q ss_pred chhhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 312 ASPLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 312 v~plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
+..++..+..+....++-||++|+|||...
T Consensus 189 i~~l~~~l~~~~~~~vLL~G~pGtGKT~la 218 (758)
T 3pxi_A 189 IQRVIEVLSRRTKNNPVLIGEPGVGKTAIA 218 (758)
T ss_dssp HHHHHHHHHCSSSCEEEEESCTTTTTHHHH
T ss_pred HHHHHHHHhCCCCCCeEEECCCCCCHHHHH
Confidence 345565555566666888999999999865
No 341
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=28.15 E-value=1.7e+02 Score=23.16 Aligned_cols=45 Identities=13% Similarity=0.179 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 037169 144 MAKCEKRIKELKIQCQLKTDECYEAWMSLTAANDQLEKVRMGLDN 188 (860)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 188 (860)
++++..++..|..++.....+...+.........+-.|.-.-|++
T Consensus 6 i~~Lss~V~~L~~kVdqLssdV~al~~~v~~ak~eA~RAN~RlDN 50 (52)
T 1jcd_A 6 ADQASSDAQTANAKADQASNDANAARSDAQAAKDDAARANQRADN 50 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 567777788888888777777777777777777776666655544
No 342
>2zj8_A DNA helicase, putative SKI2-type helicase; RECA fold, ATP-binding, hydrolase, nucleotide- binding; 2.00A {Pyrococcus furiosus} PDB: 2zj5_A* 2zj2_A 2zja_A*
Probab=27.98 E-value=12 Score=44.40 Aligned_cols=21 Identities=33% Similarity=0.468 Sum_probs=16.0
Q ss_pred hhCCccEEEEeeccCCCCccccc
Q 037169 319 VLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 319 ~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
+.+|.| ++..|+||||||...
T Consensus 36 ~~~~~~--~lv~apTGsGKT~~~ 56 (720)
T 2zj8_A 36 ILEGKN--ALISIPTASGKTLIA 56 (720)
T ss_dssp GGGTCE--EEEECCGGGCHHHHH
T ss_pred hcCCCc--EEEEcCCccHHHHHH
Confidence 455555 678899999999764
No 343
>3rc3_A ATP-dependent RNA helicase SUPV3L1, mitochondrial; SUV3, nucleus, hydrolase; HET: ANP; 2.08A {Homo sapiens} PDB: 3rc8_A
Probab=27.93 E-value=16 Score=43.67 Aligned_cols=46 Identities=22% Similarity=0.296 Sum_probs=27.4
Q ss_pred HhhCCccEEEEeeccCCCCccccccCC--CCCCCch--hh--HHHHHHHHHHHh
Q 037169 318 SVLDGYNVCIFAYGQTGTGKTFTMEGT--QQNRGVN--YR--TLELLFKIAEER 365 (860)
Q Consensus 318 ~~l~G~N~~IfaYGqTGSGKTyTM~G~--~~~~GIi--pR--al~~LF~~~~~~ 365 (860)
..++|. .|+..|+||||||+.+.-. ....|++ |+ ++.++++.+...
T Consensus 151 r~l~rk--~vlv~apTGSGKT~~al~~l~~~~~gl~l~PtR~LA~Qi~~~l~~~ 202 (677)
T 3rc3_A 151 RAMQRK--IIFHSGPTNSGKTYHAIQKYFSAKSGVYCGPLKLLAHEIFEKSNAA 202 (677)
T ss_dssp HTSCCE--EEEEECCTTSSHHHHHHHHHHHSSSEEEEESSHHHHHHHHHHHHHT
T ss_pred HhcCCC--EEEEEcCCCCCHHHHHHHHHHhcCCeEEEeCHHHHHHHHHHHHHhc
Confidence 345665 4678899999999843210 0123443 32 456677777654
No 344
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=27.87 E-value=19 Score=38.60 Aligned_cols=17 Identities=41% Similarity=0.591 Sum_probs=14.7
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|.-.|++|||||+|+
T Consensus 105 ~vi~ivG~~GsGKTTl~ 121 (306)
T 1vma_A 105 FVIMVVGVNGTGKTTSC 121 (306)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred eEEEEEcCCCChHHHHH
Confidence 46777899999999987
No 345
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli}
Probab=27.75 E-value=15 Score=42.24 Aligned_cols=26 Identities=23% Similarity=0.468 Sum_probs=18.4
Q ss_pred hHHHhhCCccEEEEeeccCCCCcccccc
Q 037169 315 LVTSVLDGYNVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 315 lV~~~l~G~N~~IfaYGqTGSGKTyTM~ 342 (860)
++..++.|. -|+-||++|+|||+...
T Consensus 34 l~~al~~~~--~VLL~GpPGtGKT~LAr 59 (500)
T 3nbx_X 34 CLLAALSGE--SVFLLGPPGIAKSLIAR 59 (500)
T ss_dssp HHHHHHHTC--EEEEECCSSSSHHHHHH
T ss_pred HHHHHhcCC--eeEeecCchHHHHHHHH
Confidence 344445554 46779999999999763
No 346
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=27.59 E-value=17 Score=35.74 Aligned_cols=16 Identities=25% Similarity=0.451 Sum_probs=13.0
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|+-.|++|||||+.+
T Consensus 14 ~i~l~G~sGsGKsTl~ 29 (204)
T 2qor_A 14 PLVVCGPSGVGKGTLI 29 (204)
T ss_dssp CEEEECCTTSCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4667899999999854
No 347
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=27.48 E-value=3.2e+02 Score=24.07 Aligned_cols=10 Identities=40% Similarity=0.514 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 037169 699 RELENRLKAR 708 (860)
Q Consensus 699 ~~lE~kl~~~ 708 (860)
..++..++.+
T Consensus 88 ~~l~~~~~~l 97 (112)
T 1l8d_A 88 SELERELRRI 97 (112)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 348
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=27.27 E-value=2.3e+02 Score=22.68 Aligned_cols=31 Identities=6% Similarity=0.022 Sum_probs=12.4
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 037169 150 RIKELKIQCQLKTDECYEAWMSLTAANDQLE 180 (860)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 180 (860)
.+.+|..++.....+..++...+..+..++.
T Consensus 23 ~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~ 53 (61)
T 1t2k_D 23 WVQSLEKKAEDLSSLNGQLQSEVTLLRNEVA 53 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444433333333333
No 349
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20
Probab=27.09 E-value=19 Score=37.82 Aligned_cols=20 Identities=25% Similarity=0.326 Sum_probs=16.8
Q ss_pred hCCccEEEEeeccCCCCccccc
Q 037169 320 LDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 320 l~G~N~~IfaYGqTGSGKTyTM 341 (860)
+.. ..++-||+.|+|||..+
T Consensus 28 l~~--~~v~i~G~~G~GKT~L~ 47 (357)
T 2fna_A 28 LRA--PITLVLGLRRTGKSSII 47 (357)
T ss_dssp TCS--SEEEEEESTTSSHHHHH
T ss_pred hcC--CcEEEECCCCCCHHHHH
Confidence 554 58899999999999876
No 350
>2p6r_A Afuhel308 helicase; protein-DNA complex, SF2 helicase, archaeal helicase, DNA repair,, DNA binding protein/DNA complex; 3.00A {Archaeoglobus fulgidus} SCOP: a.4.5.43 a.289.1.2 c.37.1.19 c.37.1.19 PDB: 2p6u_A
Probab=27.08 E-value=12 Score=44.25 Aligned_cols=26 Identities=31% Similarity=0.367 Sum_probs=19.9
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
.++..+++|.|+ +..|+||||||...
T Consensus 32 ~~i~~i~~~~~~--lv~apTGsGKT~~~ 57 (702)
T 2p6r_A 32 EAVEKVFSGKNL--LLAMPTAAGKTLLA 57 (702)
T ss_dssp HHHHHHTTCSCE--EEECSSHHHHHHHH
T ss_pred HHHHHHhCCCcE--EEEcCCccHHHHHH
Confidence 456667777765 66889999999875
No 351
>1uaa_A REP helicase, protein (ATP-dependent DNA helicase REP.); complex (helicase/DNA), DNA unwinding, hydrolase/DNA complex; HET: DNA; 3.00A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19
Probab=27.02 E-value=17 Score=42.76 Aligned_cols=23 Identities=17% Similarity=0.190 Sum_probs=18.2
Q ss_pred hCCccEEEEeeccCCCCcccccc
Q 037169 320 LDGYNVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 320 l~G~N~~IfaYGqTGSGKTyTM~ 342 (860)
+.-.++.++..|..|||||+|+.
T Consensus 11 v~~~~~~~lV~AgaGSGKT~~l~ 33 (673)
T 1uaa_A 11 VEFVTGPCLVLAGAGSGKTRVIT 33 (673)
T ss_dssp HHCCSSEEEECCCTTSCHHHHHH
T ss_pred HhCCCCCEEEEeCCCCChHHHHH
Confidence 33346677888999999999985
No 352
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=26.90 E-value=17 Score=36.85 Aligned_cols=17 Identities=24% Similarity=0.360 Sum_probs=14.7
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
-.|+-.|+.|||||+.+
T Consensus 28 ~~i~l~G~~GsGKSTl~ 44 (246)
T 2bbw_A 28 LRAVILGPPGSGKGTVC 44 (246)
T ss_dssp CEEEEECCTTSSHHHHH
T ss_pred cEEEEECCCCCCHHHHH
Confidence 46788899999999876
No 353
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58}
Probab=26.82 E-value=16 Score=36.56 Aligned_cols=16 Identities=38% Similarity=0.638 Sum_probs=13.6
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.++-+|..|||||+.+
T Consensus 7 i~l~tG~pGsGKT~~a 22 (199)
T 2r2a_A 7 ICLITGTPGSGKTLKM 22 (199)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEEeCCCCCHHHHH
Confidence 4568999999999975
No 354
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=26.75 E-value=1.6e+02 Score=26.08 Aligned_cols=44 Identities=11% Similarity=0.229 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 037169 206 KLKDVASLYERDKRLWIIAMNELERKILIWKEEHSQLAREAHEC 249 (860)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~e~~~~ 249 (860)
.|+++...|......+...+..++..+..++.+..+...|.+..
T Consensus 27 ~l~e~E~~~~~e~~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~L 70 (95)
T 3mov_A 27 RIQELEDLLAKEKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQL 70 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566667777777777788888888888887777666565543
No 355
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=26.72 E-value=14 Score=45.02 Aligned_cols=32 Identities=25% Similarity=0.339 Sum_probs=0.0
Q ss_pred chhhHHHhhCCccEEEEeeccCCCCccccccC
Q 037169 312 ASPLVTSVLDGYNVCIFAYGQTGTGKTFTMEG 343 (860)
Q Consensus 312 v~plV~~~l~G~N~~IfaYGqTGSGKTyTM~G 343 (860)
+..+++.+..+....++-||++|+|||+.+.+
T Consensus 179 i~~l~~~l~~~~~~~vlL~G~pG~GKT~la~~ 210 (854)
T 1qvr_A 179 IRRVIQILLRRTKNNPVLIGEPGVGKTAIVEG 210 (854)
T ss_dssp HHHHHHHHHCSSCCCCEEEECTTSCHHHHHHH
T ss_pred HHHHHHHHhcCCCCceEEEcCCCCCHHHHHHH
No 356
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A*
Probab=26.71 E-value=14 Score=46.34 Aligned_cols=86 Identities=17% Similarity=0.116 Sum_probs=0.0
Q ss_pred ceEEEeeCCCCcEEEEEEeeecccCCCCCcceEEEEEECCEEEeeccchhhccCCCcceEE-EEEEEeeCCCceEEEEEE
Q 037169 13 FSYRIGNLSPGDYLVDLHFAEIVNANGPKGMRVFDVFMQEEKVLLEIDIYSIVGANKPLQV-VDVRVSVGMDEVLLIRFD 91 (860)
Q Consensus 13 ~sY~f~~v~~G~Y~V~LhFaEi~~~~~~~g~RvFdV~ing~~vl~~fDI~~~~G~~~a~~~-~~~~V~~~~~g~L~I~F~ 91 (860)
.+|.+.....|.|.|.+.|+- . ..+.|.++|+|||..+...+.+-...|...-... ..+.... +...|.|.+.
T Consensus 946 v~~~V~v~~aG~Y~l~iryan---~--~~~~r~~~l~VNG~~~~~~v~~~~Tg~W~~w~~~~~~v~L~a-G~NtI~~~~~ 1019 (1032)
T 2vzs_A 946 VEWTVTVPSAGTYDVVVRYAN---G--TTTSRPLDFSVNGSISASGVAFGSTGTWPAWTTKTVRVTLAA-GVNKIKAVAT 1019 (1032)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEECCCCeEEEEEEEEEc---C--CCCCeeEEEEECCeEeeeEEEecCCCCCCccEEEEEEEEECC-CceEEEEEEc
Confidence 457774334799999999875 1 2357999999999875455655444332221111 2333331 1223444443
Q ss_pred ccCCCcEEEEEEE
Q 037169 92 GACGSPIVNGICI 104 (860)
Q Consensus 92 ~~~g~p~InaIEI 104 (860)
+..|.|-|.-|+|
T Consensus 1020 ~~~g~~niD~i~v 1032 (1032)
T 2vzs_A 1020 TANGGPNVDKITL 1032 (1032)
T ss_dssp -------------
T ss_pred CCcCceEEEEEEC
Confidence 3445577766654
No 357
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=26.54 E-value=16 Score=41.69 Aligned_cols=17 Identities=41% Similarity=0.548 Sum_probs=14.7
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-||++|+|||+.+
T Consensus 50 ~gvLL~GppGtGKT~La 66 (476)
T 2ce7_A 50 KGILLVGPPGTGKTLLA 66 (476)
T ss_dssp SEEEEECCTTSSHHHHH
T ss_pred CeEEEECCCCCCHHHHH
Confidence 34889999999999875
No 358
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=26.45 E-value=19 Score=34.73 Aligned_cols=16 Identities=44% Similarity=0.532 Sum_probs=13.6
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|+-.|..|||||+..
T Consensus 12 ~I~l~G~~GsGKSTv~ 27 (184)
T 1y63_A 12 NILITGTPGTGKTSMA 27 (184)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5788999999999853
No 359
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=26.39 E-value=19 Score=34.27 Aligned_cols=16 Identities=25% Similarity=0.353 Sum_probs=13.5
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|+-.|..|||||+..
T Consensus 3 ~I~i~G~~GsGKsT~~ 18 (194)
T 1nks_A 3 IGIVTGIPGVGKSTVL 18 (194)
T ss_dssp EEEEEECTTSCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5788999999999843
No 360
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=26.34 E-value=1.6e+02 Score=24.61 Aligned_cols=31 Identities=16% Similarity=0.130 Sum_probs=15.3
Q ss_pred hHHHHhhhhHHHHHHHHHHHHHHhhhhhHHH
Q 037169 135 QDKLMRMKSMAKCEKRIKELKIQCQLKTDEC 165 (860)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (860)
|.|.-++-+-..-+..|.+|..++.......
T Consensus 15 qNR~AQRafReRK~~~i~~LE~~v~~le~~~ 45 (70)
T 1gd2_E 15 QNRAAQRAFRKRKEDHLKALETQVVTLKELH 45 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444555555555555554444433
No 361
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=26.26 E-value=4.1e+02 Score=24.87 Aligned_cols=18 Identities=39% Similarity=0.501 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 037169 696 HKVRELENRLKARTQEFE 713 (860)
Q Consensus 696 ~ki~~lE~kl~~~~~~~e 713 (860)
.+++++|.++++-..+.+
T Consensus 98 RKLrELEADLKEKDsMVe 115 (167)
T 4gkw_A 98 RKLGELEADLKEKDSMVE 115 (167)
T ss_dssp HHTHHHHHTHHHHHHHHH
T ss_pred HHHHHHHhHHhhhhHHHH
Confidence 344555555555444433
No 362
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=26.15 E-value=21 Score=33.77 Aligned_cols=17 Identities=41% Similarity=0.536 Sum_probs=10.2
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-.|..|||||+..
T Consensus 6 ~~I~l~G~~GsGKST~a 22 (183)
T 2vli_A 6 PIIWINGPFGVGKTHTA 22 (183)
T ss_dssp CEEEEECCC----CHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 46888999999999853
No 363
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A
Probab=25.96 E-value=27 Score=37.61 Aligned_cols=31 Identities=29% Similarity=0.282 Sum_probs=23.6
Q ss_pred cchhhHHHhhCC-c--cEEEEeeccCCCCccccc
Q 037169 311 DASPLVTSVLDG-Y--NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 311 ~v~plV~~~l~G-~--N~~IfaYGqTGSGKTyTM 341 (860)
...+-++.++.| + ...+.-||++|||||..+
T Consensus 106 TG~~~LD~~LgGGl~~G~i~~I~G~~GsGKTtla 139 (343)
T 1v5w_A 106 TGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLS 139 (343)
T ss_dssp CSCHHHHHHTTSSBCSSEEEEEECCTTCTHHHHH
T ss_pred cCChhHHHHhcCCCCCCeEEEEECCCCCCHHHHH
Confidence 345668888864 3 456788999999999865
No 364
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=25.83 E-value=19 Score=33.87 Aligned_cols=16 Identities=38% Similarity=0.426 Sum_probs=13.2
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|+-.|..|||||+..
T Consensus 4 ~I~l~G~~GsGKsT~a 19 (173)
T 1e6c_A 4 PIFMVGARGCGMTTVG 19 (173)
T ss_dssp CEEEESCTTSSHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 4778899999999853
No 365
>1w4r_A Thymidine kinase; type II, human, cytosolic, phosphorylation, transferase; HET: TTP; 1.83A {Homo sapiens} PDB: 1xbt_A* 2wvj_A* 2j87_A*
Probab=25.80 E-value=20 Score=35.99 Aligned_cols=16 Identities=19% Similarity=0.135 Sum_probs=13.6
Q ss_pred cEEEEeeccCCCCccc
Q 037169 324 NVCIFAYGQTGTGKTF 339 (860)
Q Consensus 324 N~~IfaYGqTGSGKTy 339 (860)
--..|-||+.|||||.
T Consensus 20 g~l~fiyG~MgsGKTt 35 (195)
T 1w4r_A 20 GQIQVILGPMFSGKST 35 (195)
T ss_dssp CEEEEEEECTTSCHHH
T ss_pred eEEEEEECCCCCcHHH
Confidence 3478999999999993
No 366
>2xgj_A ATP-dependent RNA helicase DOB1; hydrolase-RNA complex, hydrolase, tramp, exosome, DEAD, nucleotide-binding; HET: ADP; 2.90A {Saccharomyces cerevisiae}
Probab=25.58 E-value=21 Score=44.50 Aligned_cols=26 Identities=19% Similarity=0.353 Sum_probs=20.2
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.+ ++..++||||||...
T Consensus 93 eai~~l~~g~~--vLV~apTGSGKTlva 118 (1010)
T 2xgj_A 93 TAISCIDRGES--VLVSAHTSAGKTVVA 118 (1010)
T ss_dssp HHHHHHHHTCE--EEEECCTTSCHHHHH
T ss_pred HHHHHHHcCCC--EEEECCCCCChHHHH
Confidence 35666777876 677899999999864
No 367
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=25.45 E-value=19 Score=35.19 Aligned_cols=17 Identities=29% Similarity=0.458 Sum_probs=13.6
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-.|+.|||||+.+
T Consensus 30 ~~i~l~G~~GsGKSTl~ 46 (200)
T 4eun_A 30 RHVVVMGVSGSGKTTIA 46 (200)
T ss_dssp CEEEEECCTTSCHHHHH
T ss_pred cEEEEECCCCCCHHHHH
Confidence 35666799999999865
No 368
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=25.26 E-value=18 Score=35.36 Aligned_cols=16 Identities=38% Similarity=0.293 Sum_probs=13.1
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|--.|++|||||+.+
T Consensus 8 ~i~i~G~~GsGKSTl~ 23 (211)
T 3asz_A 8 VIGIAGGTASGKTTLA 23 (211)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4556799999999865
No 369
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=25.26 E-value=21 Score=38.72 Aligned_cols=16 Identities=44% Similarity=0.517 Sum_probs=13.7
Q ss_pred EEEEeeccCCCCcccc
Q 037169 325 VCIFAYGQTGTGKTFT 340 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyT 340 (860)
-.|+-.|+||||||..
T Consensus 6 ~~i~i~GptGsGKTtl 21 (323)
T 3crm_A 6 PAIFLMGPTAAGKTDL 21 (323)
T ss_dssp EEEEEECCTTSCHHHH
T ss_pred cEEEEECCCCCCHHHH
Confidence 4688999999999973
No 370
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=25.25 E-value=20 Score=34.46 Aligned_cols=16 Identities=38% Similarity=0.580 Sum_probs=13.6
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|+-.|..|||||+..
T Consensus 14 ~I~l~G~~GsGKsT~a 29 (199)
T 2bwj_A 14 IIFIIGGPGSGKGTQC 29 (199)
T ss_dssp EEEEEECTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5788999999999853
No 371
>3l9o_A ATP-dependent RNA helicase DOB1; REC-A fold, winged-helix-turn-helix, antiparallel-coiled-COI domain, ATP-binding, helicase, hydrolase; 3.39A {Saccharomyces cerevisiae}
Probab=25.08 E-value=21 Score=45.07 Aligned_cols=26 Identities=23% Similarity=0.356 Sum_probs=20.2
Q ss_pred hhHHHhhCCccEEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..+..++.|.++ +..|+||||||...
T Consensus 191 ~AI~~i~~g~dv--LV~ApTGSGKTlva 216 (1108)
T 3l9o_A 191 TAISCIDRGESV--LVSAHTSAGKTVVA 216 (1108)
T ss_dssp HHHHHHTTTCCE--EEECCSSSHHHHHH
T ss_pred HHHHHHHcCCCE--EEECCCCCChHHHH
Confidence 456677788765 78999999999763
No 372
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=25.06 E-value=5.9e+02 Score=26.32 Aligned_cols=33 Identities=15% Similarity=0.187 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037169 197 DQALEKQAAKLKDVASLYERDKRLWIIAMNELE 229 (860)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (860)
+......+..+......|...-......++.++
T Consensus 212 ~~~Y~~~v~~~n~~~~~~~~~~~~~~~~~Q~le 244 (312)
T 3abh_A 212 KEKYEKSLKELDQGTPQYMENMEQVFEQCQQFE 244 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 333444455555555555444333333343443
No 373
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=25.02 E-value=1.6e+02 Score=22.28 Aligned_cols=20 Identities=30% Similarity=0.531 Sum_probs=11.4
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 037169 664 KEEICSNVQRKVKELENKLK 683 (860)
Q Consensus 664 ~ee~~~~lq~~~~ele~~l~ 683 (860)
.+.++..+.+++..+|++..
T Consensus 29 lekiianlrdeiarleneva 48 (52)
T 3he5_B 29 LEKIIANLRDEIARLENEVA 48 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 34555566666666665543
No 374
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=25.01 E-value=2.9e+02 Score=24.88 Aligned_cols=11 Identities=36% Similarity=0.570 Sum_probs=4.2
Q ss_pred HHHHHHHHHHH
Q 037169 721 QKIAELEEKLR 731 (860)
Q Consensus 721 ~qi~eLe~kl~ 731 (860)
.++..++..|+
T Consensus 72 ~~~~~lk~~L~ 82 (103)
T 4h22_A 72 FQFAEVKEALK 82 (103)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 375
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=24.80 E-value=20 Score=36.27 Aligned_cols=16 Identities=19% Similarity=0.328 Sum_probs=13.1
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
++.-.|++|||||..+
T Consensus 18 ii~l~GpsGsGKSTLl 33 (219)
T 1s96_A 18 LYIVSAPSGAGKSSLI 33 (219)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4556799999999865
No 376
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=24.75 E-value=19 Score=41.55 Aligned_cols=18 Identities=28% Similarity=0.311 Sum_probs=14.8
Q ss_pred cEEEEeeccCCCCccccc
Q 037169 324 NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM 341 (860)
...++-||++|+|||+++
T Consensus 108 g~~vll~Gp~GtGKTtla 125 (543)
T 3m6a_A 108 GPILCLAGPPGVGKTSLA 125 (543)
T ss_dssp SCEEEEESSSSSSHHHHH
T ss_pred CCEEEEECCCCCCHHHHH
Confidence 346788999999999865
No 377
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=24.57 E-value=20 Score=34.36 Aligned_cols=17 Identities=29% Similarity=0.577 Sum_probs=14.2
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
.++.-.|+.|||||..+
T Consensus 34 e~v~L~G~nGaGKTTLl 50 (158)
T 1htw_A 34 IMVYLNGDLGAGKTTLT 50 (158)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred CEEEEECCCCCCHHHHH
Confidence 46667899999999876
No 378
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=24.51 E-value=3.5e+02 Score=23.48 Aligned_cols=19 Identities=26% Similarity=0.466 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 037169 665 EEICSNVQRKVKELENKLK 683 (860)
Q Consensus 665 ee~~~~lq~~~~ele~~l~ 683 (860)
.+....+..+...++..+.
T Consensus 64 ~e~~~~L~~~~e~i~~~i~ 82 (107)
T 1fxk_A 64 DELTEELQEKLETLQLREK 82 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444555555555554443
No 379
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=24.44 E-value=2.2e+02 Score=25.56 Aligned_cols=17 Identities=12% Similarity=0.284 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHhc
Q 037169 583 KLQKVKMMLEKTKQEVG 599 (860)
Q Consensus 583 ~~~~lk~~l~~~k~e~~ 599 (860)
++..++..++.++.+..
T Consensus 13 ~~~~lr~ei~~Le~E~~ 29 (100)
T 1go4_E 13 EADTLRLKVEELEGERS 29 (100)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45555555555555443
No 380
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=24.34 E-value=23 Score=39.96 Aligned_cols=17 Identities=41% Similarity=0.538 Sum_probs=13.9
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+..|++|||||+|+
T Consensus 98 ~vI~lvG~~GsGKTTt~ 114 (433)
T 3kl4_A 98 FIIMLVGVQGSGKTTTA 114 (433)
T ss_dssp EEEEECCCTTSCHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 44566699999999987
No 381
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=24.26 E-value=3.7e+02 Score=23.69 Aligned_cols=20 Identities=25% Similarity=0.539 Sum_probs=10.5
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 037169 664 KEEICSNVQRKVKELENKLK 683 (860)
Q Consensus 664 ~ee~~~~lq~~~~ele~~l~ 683 (860)
..+....+..+...++..+.
T Consensus 68 ~~ea~~~L~~~~e~ie~~i~ 87 (117)
T 2zqm_A 68 KDKAVAELKEKIETLEVRLN 87 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555554444
No 382
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=24.19 E-value=21 Score=33.87 Aligned_cols=15 Identities=33% Similarity=0.414 Sum_probs=12.5
Q ss_pred EEEeeccCCCCcccc
Q 037169 326 CIFAYGQTGTGKTFT 340 (860)
Q Consensus 326 ~IfaYGqTGSGKTyT 340 (860)
.|+-.|+.|||||+.
T Consensus 6 ~i~i~G~~GsGKsTl 20 (175)
T 1via_A 6 NIVFIGFMGSGKSTL 20 (175)
T ss_dssp CEEEECCTTSCHHHH
T ss_pred EEEEEcCCCCCHHHH
Confidence 367789999999984
No 383
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=24.06 E-value=21 Score=34.07 Aligned_cols=15 Identities=27% Similarity=0.355 Sum_probs=12.7
Q ss_pred EEEeeccCCCCcccc
Q 037169 326 CIFAYGQTGTGKTFT 340 (860)
Q Consensus 326 ~IfaYGqTGSGKTyT 340 (860)
.|+-.|..|||||+.
T Consensus 4 ~I~l~G~~GsGKsT~ 18 (184)
T 2iyv_A 4 KAVLVGLPGSGKSTI 18 (184)
T ss_dssp SEEEECSTTSSHHHH
T ss_pred eEEEECCCCCCHHHH
Confidence 377889999999974
No 384
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A*
Probab=23.94 E-value=22 Score=36.07 Aligned_cols=22 Identities=32% Similarity=0.564 Sum_probs=16.9
Q ss_pred hCCccEEEEeeccCCCCccccc
Q 037169 320 LDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 320 l~G~N~~IfaYGqTGSGKTyTM 341 (860)
++-+...|+-.|+||||||...
T Consensus 30 v~~~g~~ilI~GpsGsGKStLA 51 (205)
T 2qmh_A 30 VDIYGLGVLITGDSGVGKSETA 51 (205)
T ss_dssp EEETTEEEEEECCCTTTTHHHH
T ss_pred EEECCEEEEEECCCCCCHHHHH
Confidence 3444567889999999998754
No 385
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=23.93 E-value=23 Score=33.06 Aligned_cols=16 Identities=25% Similarity=0.283 Sum_probs=13.2
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|+-.|..|||||+..
T Consensus 2 ~I~l~G~~GsGKsT~a 17 (168)
T 2pt5_A 2 RIYLIGFMCSGKSTVG 17 (168)
T ss_dssp EEEEESCTTSCHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 4778999999999753
No 386
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=23.91 E-value=22 Score=42.51 Aligned_cols=34 Identities=29% Similarity=0.427 Sum_probs=24.8
Q ss_pred EeccchhhHHHhh-CCccEEEEeeccCCCCccccc
Q 037169 308 VFADASPLVTSVL-DGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 308 Vf~~v~plV~~~l-~G~N~~IfaYGqTGSGKTyTM 341 (860)
||.-+......++ ++.|-||+.-|.+|||||.+.
T Consensus 77 ifaiA~~Ay~~m~~~~~nQsIiisGESGAGKTe~t 111 (697)
T 1lkx_A 77 MYALANDAYRSMRQSQENQCVIISGESGAGKTEAS 111 (697)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcEEEecCCCCCCchhhH
Confidence 4544333333333 599999999999999999875
No 387
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=23.90 E-value=24 Score=40.62 Aligned_cols=17 Identities=41% Similarity=0.620 Sum_probs=14.4
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
.+|.-.|++|||||.++
T Consensus 294 eVI~LVGpNGSGKTTLl 310 (503)
T 2yhs_A 294 FVILMVGVNGVGKTTTI 310 (503)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred eEEEEECCCcccHHHHH
Confidence 45667799999999987
No 388
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=23.82 E-value=21 Score=36.44 Aligned_cols=16 Identities=25% Similarity=0.538 Sum_probs=13.0
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
++.-.|++|||||+.|
T Consensus 33 ~~~iiG~nGsGKSTLl 48 (235)
T 3tif_A 33 FVSIMGPSGSGKSTML 48 (235)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCcHHHHH
Confidence 4556799999999865
No 389
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=23.78 E-value=3.4e+02 Score=24.77 Aligned_cols=15 Identities=20% Similarity=0.144 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHH
Q 037169 224 AMNELERKILIWKEE 238 (860)
Q Consensus 224 ~~~~~~~~~~~~~~e 238 (860)
....++.+|.+++..
T Consensus 70 ~Vs~lq~KiaeLKrq 84 (113)
T 4fi5_A 70 VAVSIQAKIDELKRQ 84 (113)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 444455555555544
No 390
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=23.73 E-value=1e+02 Score=30.38 Aligned_cols=29 Identities=21% Similarity=0.059 Sum_probs=16.8
Q ss_pred hHHHHhhhhHHHHHHHHHHHHHHhhhhhHHH
Q 037169 135 QDKLMRMKSMAKCEKRIKELKIQCQLKTDEC 165 (860)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (860)
|.++ ++..+++..+..+|+.+...++.+.
T Consensus 73 q~ql--~~I~~e~r~~~~~Lr~ql~akr~EL 101 (175)
T 3lay_A 73 QATA--QKIYDDYYTQTSALRQQLISKRYEY 101 (175)
T ss_dssp HHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444 4566677777766665555555443
No 391
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=23.61 E-value=4.5e+02 Score=24.44 Aligned_cols=16 Identities=13% Similarity=0.391 Sum_probs=11.9
Q ss_pred HhHHHHHHHHHHhhcc
Q 037169 555 GETLSSLNFASRVRGV 570 (860)
Q Consensus 555 ~ETl~TL~fA~r~r~I 570 (860)
.-|..||+|-.+.--+
T Consensus 13 gvs~~tLR~Ye~~GLl 28 (142)
T 3gp4_A 13 GVSADTIRYYERIGLI 28 (142)
T ss_dssp TSCHHHHHHHHHHTSS
T ss_pred CcCHHHHHHHHHCCCC
Confidence 3467899999888554
No 392
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=23.60 E-value=22 Score=33.99 Aligned_cols=17 Identities=35% Similarity=0.512 Sum_probs=13.9
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-.|..|||||+..
T Consensus 10 ~~I~l~G~~GsGKsT~~ 26 (196)
T 2c95_A 10 NIIFVVGGPGSGKGTQC 26 (196)
T ss_dssp CEEEEEECTTSSHHHHH
T ss_pred CEEEEECCCCCCHHHHH
Confidence 36788899999999853
No 393
>2avr_X Adhesion A; antiparallel helix-loop-helix, leucine chain; HET: FLC; 1.90A {Fusobacterium nucleatum} PDB: 3etw_A 2gkq_A 2bc6_A 3etx_A 3ety_A 2gld_A 3etz_A 2gl2_A
Probab=23.56 E-value=4.4e+02 Score=24.32 Aligned_cols=93 Identities=10% Similarity=0.215 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHH--HHHHHHHHHHhhHH
Q 037169 641 ESKTQLCRQLEKQLLQVSEGMKGKEEICSNVQRKVKELENKLKEHDQSENVTALHHKVRELENR--LKARTQEFEVHSGM 718 (860)
Q Consensus 641 ~~~~~~~~~le~~l~~l~~~~~~~ee~~~~lq~~~~ele~~l~~~~q~~~~~~le~ki~~lE~k--l~~~~~~~e~~~~~ 718 (860)
......+.+|+.++.+|...-.+. .....+....-...|.++.+-... +..++..++.- ..-++..|......
T Consensus 5 ~~V~s~l~~LEaeyq~L~~kE~qr---ynqeka~AE~A~~~L~~~~~m~~~--i~ek~~~i~~~~~~~~yK~eY~~L~Kk 79 (119)
T 2avr_X 5 ASLVGELQALDAEYQNLANQEEAR---FNEERAQADAARQALAQNEQVYNE--LSQRAQRLQAEANTRFYKSQYQELASK 79 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHTTSCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHhcccHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 037169 719 LQQKIAELEEKLRKKEEYAT 738 (860)
Q Consensus 719 lq~qi~eLe~kl~~Qeeq~~ 738 (860)
.+.-+..|+.+.+++++.++
T Consensus 80 Yk~~~~~Ld~eI~~qe~iI~ 99 (119)
T 2avr_X 80 YEDALKKLEAEMEQQKAVIS 99 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
No 394
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=23.55 E-value=22 Score=34.61 Aligned_cols=17 Identities=29% Similarity=0.403 Sum_probs=14.1
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-.|..|||||+..
T Consensus 19 ~~I~l~G~~GsGKSTla 35 (202)
T 3t61_A 19 GSIVVMGVSGSGKSSVG 35 (202)
T ss_dssp SCEEEECSTTSCHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 36788999999999854
No 395
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=23.54 E-value=23 Score=36.41 Aligned_cols=17 Identities=29% Similarity=0.378 Sum_probs=14.4
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-.|..|||||+..
T Consensus 5 ~lIvl~G~pGSGKSTla 21 (260)
T 3a4m_A 5 MLIILTGLPGVGKSTFS 21 (260)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred EEEEEEcCCCCCHHHHH
Confidence 46889999999999853
No 396
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=23.54 E-value=23 Score=34.33 Aligned_cols=17 Identities=35% Similarity=0.561 Sum_probs=14.1
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
-.|+-.|..|||||+..
T Consensus 16 ~~I~l~G~~GsGKsT~~ 32 (203)
T 1ukz_A 16 SVIFVLGGPGAGKGTQC 32 (203)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred cEEEEECCCCCCHHHHH
Confidence 46888999999999854
No 397
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=23.45 E-value=22 Score=36.77 Aligned_cols=21 Identities=24% Similarity=0.659 Sum_probs=17.3
Q ss_pred CCccEEEEeeccCCCCccccc
Q 037169 321 DGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 321 ~G~N~~IfaYGqTGSGKTyTM 341 (860)
.|+...|...|.+|+|||..+
T Consensus 5 ~g~~~~I~vvG~~g~GKSTLi 25 (274)
T 3t5d_A 5 SGFEFTLMVVGESGLGKSTLI 25 (274)
T ss_dssp --CEEEEEEEECTTSSHHHHH
T ss_pred CccEEEEEEECCCCCCHHHHH
Confidence 588999999999999999755
No 398
>4ddu_A Reverse gyrase; topoisomerase, DNA supercoiling, archaea, helicase, hydrolas; 3.00A {Thermotoga maritima} PDB: 4ddt_A 4ddv_A 4ddw_A 4ddx_A
Probab=23.38 E-value=29 Score=43.68 Aligned_cols=24 Identities=25% Similarity=0.346 Sum_probs=19.3
Q ss_pred hHHHhhCCccEEEEeeccCCCCcccc
Q 037169 315 LVTSVLDGYNVCIFAYGQTGTGKTFT 340 (860)
Q Consensus 315 lV~~~l~G~N~~IfaYGqTGSGKTyT 340 (860)
.+..++.|.| +++.++||||||..
T Consensus 86 ai~~il~g~d--vlv~ApTGSGKTl~ 109 (1104)
T 4ddu_A 86 WAKRIVQGKS--FTMVAPTGVGKTTF 109 (1104)
T ss_dssp HHHHHTTTCC--EEECCSTTCCHHHH
T ss_pred HHHHHHcCCC--EEEEeCCCCcHHHH
Confidence 4667788887 46889999999983
No 399
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=23.36 E-value=28 Score=36.80 Aligned_cols=20 Identities=40% Similarity=0.654 Sum_probs=15.9
Q ss_pred CccEEEEeeccCCCCccccc
Q 037169 322 GYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 322 G~N~~IfaYGqTGSGKTyTM 341 (860)
+....|.-.|++|||||+..
T Consensus 29 ~~~~ii~I~G~sGsGKSTla 48 (290)
T 1odf_A 29 KCPLFIFFSGPQGSGKSFTS 48 (290)
T ss_dssp CSCEEEEEECCTTSSHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHH
Confidence 44566777899999999865
No 400
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=23.30 E-value=23 Score=33.64 Aligned_cols=16 Identities=31% Similarity=0.617 Sum_probs=13.5
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|+-.|..|||||+..
T Consensus 8 ~I~l~G~~GsGKsT~~ 23 (194)
T 1qf9_A 8 VVFVLGGPGSGKGTQC 23 (194)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5778899999999853
No 401
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=23.27 E-value=24 Score=38.17 Aligned_cols=16 Identities=44% Similarity=0.584 Sum_probs=13.4
Q ss_pred EEEEeeccCCCCcccc
Q 037169 325 VCIFAYGQTGTGKTFT 340 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyT 340 (860)
-.|+-.|+||||||..
T Consensus 11 ~~i~i~GptgsGKt~l 26 (316)
T 3foz_A 11 KAIFLMGPTASGKTAL 26 (316)
T ss_dssp EEEEEECCTTSCHHHH
T ss_pred cEEEEECCCccCHHHH
Confidence 4678899999999874
No 402
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A*
Probab=23.17 E-value=34 Score=36.18 Aligned_cols=30 Identities=37% Similarity=0.380 Sum_probs=22.9
Q ss_pred chhhHHHhhCC-c--cEEEEeeccCCCCccccc
Q 037169 312 ASPLVTSVLDG-Y--NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 312 v~plV~~~l~G-~--N~~IfaYGqTGSGKTyTM 341 (860)
..|-++.++.| . ...+.-||++|||||..+
T Consensus 83 G~~~LD~~l~GGl~~g~i~~i~G~~gsGKT~la 115 (322)
T 2i1q_A 83 SSSELDSVLGGGLESQSVTEFAGVFGSGKTQIM 115 (322)
T ss_dssp SCHHHHHHTTSSEETTEEEEEEESTTSSHHHHH
T ss_pred CChhHHHhcCCCccCCeEEEEECCCCCCHHHHH
Confidence 45667888853 3 357889999999999865
No 403
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=23.12 E-value=4.4e+02 Score=24.21 Aligned_cols=14 Identities=7% Similarity=0.204 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHH
Q 037169 584 LQKVKMMLEKTKQE 597 (860)
Q Consensus 584 ~~~lk~~l~~~k~e 597 (860)
|..|+..++.++.+
T Consensus 17 Ie~Lkreie~lk~e 30 (120)
T 3i00_A 17 IERLYREISGLKAQ 30 (120)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44455555544444
No 404
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=23.09 E-value=25 Score=35.96 Aligned_cols=17 Identities=41% Similarity=0.600 Sum_probs=14.4
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-.|++|||||+..
T Consensus 33 ~~i~l~G~~GsGKSTla 49 (253)
T 2p5t_B 33 IAILLGGQSGAGKTTIH 49 (253)
T ss_dssp EEEEEESCGGGTTHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 56889999999999753
No 405
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=23.06 E-value=27 Score=33.52 Aligned_cols=18 Identities=28% Similarity=0.540 Sum_probs=14.6
Q ss_pred cEEEEeeccCCCCccccc
Q 037169 324 NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM 341 (860)
...|+-.|..|||||+..
T Consensus 13 ~~~i~l~G~~GsGKsT~~ 30 (186)
T 2yvu_A 13 GIVVWLTGLPGSGKTTIA 30 (186)
T ss_dssp CEEEEEECCTTSSHHHHH
T ss_pred CcEEEEEcCCCCCHHHHH
Confidence 356778899999999854
No 406
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=23.05 E-value=23 Score=36.97 Aligned_cols=17 Identities=18% Similarity=0.206 Sum_probs=15.1
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..++-||+.|+|||..+
T Consensus 32 ~~v~i~G~~G~GKT~Ll 48 (350)
T 2qen_A 32 PLTLLLGIRRVGKSSLL 48 (350)
T ss_dssp SEEEEECCTTSSHHHHH
T ss_pred CeEEEECCCcCCHHHHH
Confidence 57888999999999876
No 407
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=22.92 E-value=24 Score=38.43 Aligned_cols=16 Identities=38% Similarity=0.482 Sum_probs=13.7
Q ss_pred EEEEeeccCCCCcccc
Q 037169 325 VCIFAYGQTGTGKTFT 340 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyT 340 (860)
-.|+-.|+||||||..
T Consensus 41 ~lIvI~GPTgsGKTtL 56 (339)
T 3a8t_A 41 KLLVLMGATGTGKSRL 56 (339)
T ss_dssp EEEEEECSTTSSHHHH
T ss_pred ceEEEECCCCCCHHHH
Confidence 3688999999999874
No 408
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11
Probab=22.89 E-value=33 Score=37.16 Aligned_cols=29 Identities=28% Similarity=0.396 Sum_probs=21.7
Q ss_pred hhhHHHhhCC---ccEEEEeeccCCCCccccc
Q 037169 313 SPLVTSVLDG---YNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 313 ~plV~~~l~G---~N~~IfaYGqTGSGKTyTM 341 (860)
.|-++.+|.| ....+.-+|++|||||..+
T Consensus 117 ~~~LD~lL~ggi~~G~i~~I~G~~GsGKTTL~ 148 (349)
T 1pzn_A 117 SKSLDKLLGGGIETQAITEVFGEFGSGKTQLA 148 (349)
T ss_dssp CHHHHHHHTSSEESSEEEEEEESTTSSHHHHH
T ss_pred CHHHHHHhcCCCCCCeEEEEECCCCCCHHHHH
Confidence 3556777764 3457788999999999865
No 409
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=22.75 E-value=22 Score=35.44 Aligned_cols=17 Identities=24% Similarity=0.346 Sum_probs=14.0
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-.|.+|||||+..
T Consensus 8 ~~I~l~G~~GsGKsT~a 24 (227)
T 1zd8_A 8 LRAVIMGAPGSGKGTVS 24 (227)
T ss_dssp CEEEEEECTTSSHHHHH
T ss_pred cEEEEECCCCCCHHHHH
Confidence 35788999999999854
No 410
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=22.68 E-value=22 Score=44.59 Aligned_cols=35 Identities=29% Similarity=0.319 Sum_probs=26.0
Q ss_pred EEeccchhhHHHhh-CCccEEEEeeccCCCCccccc
Q 037169 307 DVFADASPLVTSVL-DGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 307 dVf~~v~plV~~~l-~G~N~~IfaYGqTGSGKTyTM 341 (860)
.||.-+......++ +|.|-||+.-|.+|||||.+.
T Consensus 126 HIfaiA~~AY~~M~~~~~nQsIiiSGESGAGKTest 161 (1052)
T 4anj_A 126 HVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENT 161 (1052)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHH
T ss_pred cHHHHHHHHHHHHHHhCCCceEEEecCCCCCHHHHH
Confidence 35554444444444 599999999999999999875
No 411
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=22.41 E-value=7.6e+02 Score=27.83 Aligned_cols=16 Identities=19% Similarity=0.412 Sum_probs=12.2
Q ss_pred cccCCCchHHHHHhhh
Q 037169 789 DLLKGTNSLRELRRKR 804 (860)
Q Consensus 789 ~~~~~~~~~~~~~~~~ 804 (860)
.+.-|++-++.++..+
T Consensus 291 EfWLGlE~IH~LT~~~ 306 (461)
T 3ghg_B 291 EYWLGNDKISQLTRMG 306 (461)
T ss_dssp CEEECHHHHHHHHHTS
T ss_pred ceEecchHHHHhhcCC
Confidence 4566888899998765
No 412
>3o8b_A HCV NS3 protease/helicase; ntpase, RNA, translocation, protein-RNA compl protease/ntpase/helicase, hydrolase; 1.95A {Hepatitis c virus} PDB: 3o8c_A* 3o8d_A* 3o8r_A* 4b71_A* 4b73_A* 4b74_A* 4b76_A* 4b75_A* 4a92_A* 1cu1_A 4b6e_A* 4b6f_A* 2zjo_A* 1a1v_A* 1hei_A 3kqn_A* 3kql_A* 3kqu_A* 3kqh_A 3kqk_A ...
Probab=22.41 E-value=31 Score=41.05 Aligned_cols=17 Identities=24% Similarity=0.333 Sum_probs=13.9
Q ss_pred EEEeeccCCCCcccccc
Q 037169 326 CIFAYGQTGTGKTFTME 342 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM~ 342 (860)
.++..|+||||||+.+.
T Consensus 234 ~vlv~ApTGSGKT~a~~ 250 (666)
T 3o8b_A 234 VAHLHAPTGSGKSTKVP 250 (666)
T ss_dssp EEEEECCTTSCTTTHHH
T ss_pred eEEEEeCCchhHHHHHH
Confidence 46788999999997654
No 413
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=22.39 E-value=24 Score=38.50 Aligned_cols=24 Identities=29% Similarity=0.625 Sum_probs=21.1
Q ss_pred HhhCCccEEEEeeccCCCCccccc
Q 037169 318 SVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 318 ~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
.+..|++..|...|.+|+|||..+
T Consensus 31 ~~~~~~~~~I~vvG~~g~GKSTLl 54 (361)
T 2qag_A 31 SVKKGFEFTLMVVGESGLGKSTLI 54 (361)
T ss_dssp HHHHCCEECEEECCCTTSCHHHHH
T ss_pred eecCCCCEEEEEEcCCCCCHHHHH
Confidence 467899999999999999999765
No 414
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=22.30 E-value=4.5e+02 Score=23.96 Aligned_cols=21 Identities=29% Similarity=0.569 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 037169 665 EEICSNVQRKVKELENKLKEH 685 (860)
Q Consensus 665 ee~~~~lq~~~~ele~~l~~~ 685 (860)
....+.++.++.++...|...
T Consensus 68 ~~~Vs~lq~KiaeLKrqLAd~ 88 (113)
T 4fi5_A 68 EGVAVSIQAKIDELKRQLADR 88 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555554433
No 415
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=22.24 E-value=25 Score=42.53 Aligned_cols=34 Identities=32% Similarity=0.448 Sum_probs=25.0
Q ss_pred EeccchhhHHHhh-CCccEEEEeeccCCCCccccc
Q 037169 308 VFADASPLVTSVL-DGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 308 Vf~~v~plV~~~l-~G~N~~IfaYGqTGSGKTyTM 341 (860)
||.-+.....+++ ++.|-||+..|.+|||||.+.
T Consensus 155 ifaiA~~Ay~~m~~~~~nQsIiisGESGAGKTe~t 189 (770)
T 1w9i_A 155 IFAISDVAYRSMLDDRQNQSLLITGESGAGKTENT 189 (770)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEecCCCCcchHHH
Confidence 4544433333333 599999999999999999875
No 416
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=22.22 E-value=25 Score=42.64 Aligned_cols=34 Identities=29% Similarity=0.324 Sum_probs=24.9
Q ss_pred EeccchhhHHHhh-CCccEEEEeeccCCCCccccc
Q 037169 308 VFADASPLVTSVL-DGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 308 Vf~~v~plV~~~l-~G~N~~IfaYGqTGSGKTyTM 341 (860)
||.-+......++ ++.|-||+.-|.+|||||.+.
T Consensus 123 ifaiA~~Ay~~m~~~~~nQsIiiSGESGAGKTe~t 157 (784)
T 2v26_A 123 VFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENT 157 (784)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEcCCCCCCceehH
Confidence 4544433333333 599999999999999999875
No 417
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=22.22 E-value=28 Score=33.79 Aligned_cols=20 Identities=25% Similarity=0.479 Sum_probs=15.7
Q ss_pred CccEEEEeeccCCCCccccc
Q 037169 322 GYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 322 G~N~~IfaYGqTGSGKTyTM 341 (860)
.....|+-.|..|||||+..
T Consensus 18 ~~~~~I~l~G~~GsGKST~a 37 (201)
T 2cdn_A 18 GSHMRVLLLGPPGAGKGTQA 37 (201)
T ss_dssp CSCCEEEEECCTTSSHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHH
Confidence 34457888999999999853
No 418
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=22.21 E-value=24 Score=34.93 Aligned_cols=17 Identities=24% Similarity=0.415 Sum_probs=13.8
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..|+-.|..|||||+..
T Consensus 5 ~~I~l~G~~GsGKsT~a 21 (220)
T 1aky_A 5 IRMVLIGPPGAGKGTQA 21 (220)
T ss_dssp CEEEEECCTTSSHHHHH
T ss_pred cEEEEECCCCCCHHHHH
Confidence 35788999999999743
No 419
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=22.16 E-value=8.8e+02 Score=27.32 Aligned_cols=24 Identities=33% Similarity=0.576 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhc
Q 037169 718 MLQQKIAELEEKLRKKEEYATAYC 741 (860)
Q Consensus 718 ~lq~qi~eLe~kl~~Qeeq~~~~~ 741 (860)
.+..+|..|+..+..+++.-.+.|
T Consensus 174 ~~~~~i~~l~~~~~~~~~~c~~pc 197 (461)
T 3ghg_B 174 NLRSKIQKLESDVSAQMEYCRTPC 197 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSBC
T ss_pred HHHHHHHHHHHHHHhhhhhccCCC
Confidence 445566666666666665554444
No 420
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=22.12 E-value=4.1e+02 Score=23.80 Aligned_cols=24 Identities=38% Similarity=0.376 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 037169 631 EKINELESQLESKTQLCRQLEKQL 654 (860)
Q Consensus 631 ~k~~ele~~l~~~~~~~~~le~~l 654 (860)
.++.+|+.....+.+.+..||.+|
T Consensus 19 ~ei~~Le~E~~rLr~~~~~LE~~L 42 (100)
T 1go4_E 19 LKVEELEGERSRLEEEKRMLEAQL 42 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333333
No 421
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=22.06 E-value=24 Score=34.49 Aligned_cols=16 Identities=31% Similarity=0.268 Sum_probs=12.8
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|.-.|.+|||||..+
T Consensus 6 ~i~i~G~sGsGKTTl~ 21 (169)
T 1xjc_A 6 VWQVVGYKHSGKTTLM 21 (169)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4566789999999865
No 422
>1f6b_A SAR1; gtpases, N-terminal helix, Mg-containing complex, protein transport; HET: GDP; 1.70A {Cricetulus griseus} SCOP: c.37.1.8 PDB: 2fmx_A* 2fa9_A* 2gao_A*
Probab=22.06 E-value=31 Score=33.38 Aligned_cols=30 Identities=20% Similarity=0.152 Sum_probs=21.5
Q ss_pred chhhHHHh-hCCccEEEEeeccCCCCccccc
Q 037169 312 ASPLVTSV-LDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 312 v~plV~~~-l~G~N~~IfaYGqTGSGKTyTM 341 (860)
..++++.+ +.-...-|...|.+|+|||..+
T Consensus 12 ~~~~l~~~~~~~~~~ki~lvG~~~vGKSsLi 42 (198)
T 1f6b_A 12 FSSVLQFLGLYKKTGKLVFLGLDNAGKTTLL 42 (198)
T ss_dssp -CHHHHHHTCTTCCEEEEEEEETTSSHHHHH
T ss_pred HHHHHHHhhccCCCcEEEEECCCCCCHHHHH
Confidence 45666665 4444567888999999999865
No 423
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=22.05 E-value=27 Score=39.47 Aligned_cols=19 Identities=32% Similarity=0.492 Sum_probs=15.8
Q ss_pred cEEEEeeccCCCCcccccc
Q 037169 324 NVCIFAYGQTGTGKTFTME 342 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM~ 342 (860)
...|+..|++|+|||+|..
T Consensus 100 p~vIlivG~~G~GKTTt~~ 118 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVA 118 (443)
T ss_dssp SEEEEEECCTTSSHHHHHH
T ss_pred CeEEEEECcCCCCHHHHHH
Confidence 3567889999999999973
No 424
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A*
Probab=22.05 E-value=29 Score=36.93 Aligned_cols=31 Identities=26% Similarity=0.370 Sum_probs=23.2
Q ss_pred cchhhHHHhhCC-c--cEEEEeeccCCCCccccc
Q 037169 311 DASPLVTSVLDG-Y--NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 311 ~v~plV~~~l~G-~--N~~IfaYGqTGSGKTyTM 341 (860)
...|-++.++.| . ...+.-||++|||||..+
T Consensus 91 TG~~~LD~~L~GGl~~G~i~~i~G~~GsGKT~la 124 (324)
T 2z43_A 91 TGSQALDGLLAGGIETRTMTEFFGEFGSGKTQLC 124 (324)
T ss_dssp CSCHHHHHHTTTSEETTSEEEEEESTTSSHHHHH
T ss_pred CCchhHHHhcCCCCCCCcEEEEECCCCCCHhHHH
Confidence 345678888864 2 346788999999999865
No 425
>1gm5_A RECG; helicase, replication restart; HET: DNA ADP; 3.24A {Thermotoga maritima} SCOP: a.24.21.1 b.40.4.9 c.37.1.19 c.37.1.19
Probab=21.85 E-value=25 Score=42.65 Aligned_cols=26 Identities=19% Similarity=0.308 Sum_probs=18.7
Q ss_pred HHHhhCCccEEEEeeccCCCCccccc
Q 037169 316 VTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 316 V~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
....-.|....++..|+||||||...
T Consensus 381 ~~~l~~~~~~~~Ll~a~TGSGKTlva 406 (780)
T 1gm5_A 381 RNDMISEKPMNRLLQGDVGSGKTVVA 406 (780)
T ss_dssp HHHHHSSSCCCCEEECCSSSSHHHHH
T ss_pred HhhccccCCCcEEEEcCCCCCHHHHH
Confidence 33444455556788999999999875
No 426
>2iut_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- cell division, DNA translocation, KOPS, membrane; HET: DNA SAP; 2.25A {Pseudomonas aeruginosa} PDB: 2iuu_A*
Probab=21.78 E-value=22 Score=41.49 Aligned_cols=17 Identities=29% Similarity=0.563 Sum_probs=14.5
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
.-++..|.||||||+++
T Consensus 215 pHlLIaG~TGSGKS~~L 231 (574)
T 2iut_A 215 PHLLVAGTTGSGKSVGV 231 (574)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred CeeEEECCCCCCHHHHH
Confidence 45678899999999976
No 427
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=21.78 E-value=25 Score=34.52 Aligned_cols=15 Identities=33% Similarity=0.463 Sum_probs=12.5
Q ss_pred EEeeccCCCCccccc
Q 037169 327 IFAYGQTGTGKTFTM 341 (860)
Q Consensus 327 IfaYGqTGSGKTyTM 341 (860)
|+-.|+.|||||+..
T Consensus 3 I~l~G~~GsGKsT~a 17 (216)
T 3fb4_A 3 IVLMGLPGAGKGTQA 17 (216)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 567899999999754
No 428
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=21.76 E-value=25 Score=34.27 Aligned_cols=16 Identities=31% Similarity=0.326 Sum_probs=13.2
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|.-.|+.|||||+..
T Consensus 4 ~i~l~G~~GsGKST~~ 19 (206)
T 1jjv_A 4 IVGLTGGIGSGKTTIA 19 (206)
T ss_dssp EEEEECSTTSCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4667899999999864
No 429
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=21.75 E-value=27 Score=35.40 Aligned_cols=14 Identities=43% Similarity=0.748 Sum_probs=12.2
Q ss_pred EEEeeccCCCCccc
Q 037169 326 CIFAYGQTGTGKTF 339 (860)
Q Consensus 326 ~IfaYGqTGSGKTy 339 (860)
.||-.|+.||||++
T Consensus 31 iI~llGpPGsGKgT 44 (217)
T 3umf_A 31 VIFVLGGPGSGKGT 44 (217)
T ss_dssp EEEEECCTTCCHHH
T ss_pred EEEEECCCCCCHHH
Confidence 57889999999976
No 430
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=21.70 E-value=27 Score=37.87 Aligned_cols=15 Identities=40% Similarity=0.408 Sum_probs=12.8
Q ss_pred EEEeeccCCCCcccc
Q 037169 326 CIFAYGQTGTGKTFT 340 (860)
Q Consensus 326 ~IfaYGqTGSGKTyT 340 (860)
.|+-.|+||||||..
T Consensus 5 ~i~i~GptgsGKt~l 19 (322)
T 3exa_A 5 LVAIVGPTAVGKTKT 19 (322)
T ss_dssp EEEEECCTTSCHHHH
T ss_pred EEEEECCCcCCHHHH
Confidence 577799999999874
No 431
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=21.68 E-value=24 Score=37.88 Aligned_cols=16 Identities=38% Similarity=0.590 Sum_probs=13.2
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
+|.-.|++|+|||+|+
T Consensus 107 vI~ivG~~G~GKTT~~ 122 (320)
T 1zu4_A 107 IFMLVGVNGTGKTTSL 122 (320)
T ss_dssp EEEEESSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4555699999999987
No 432
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=21.56 E-value=26 Score=32.83 Aligned_cols=25 Identities=24% Similarity=0.399 Sum_probs=18.8
Q ss_pred HHhhC-CccEEEEeeccCCCCccccc
Q 037169 317 TSVLD-GYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 317 ~~~l~-G~N~~IfaYGqTGSGKTyTM 341 (860)
..++. .....|...|.+|+|||..+
T Consensus 10 ~~~~~~~~~~~i~v~G~~~~GKssli 35 (183)
T 1moz_A 10 DKLWGSNKELRILILGLDGAGKTTIL 35 (183)
T ss_dssp GGGTTCSSCEEEEEEEETTSSHHHHH
T ss_pred HHhcCCCCccEEEEECCCCCCHHHHH
Confidence 33444 46678889999999999765
No 433
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=21.53 E-value=25 Score=35.21 Aligned_cols=34 Identities=15% Similarity=0.263 Sum_probs=20.7
Q ss_pred EEeeccCCCCccccccCCCCCCCchhhHHHHHHH
Q 037169 327 IFAYGQTGTGKTFTMEGTQQNRGVNYRTLELLFK 360 (860)
Q Consensus 327 IfaYGqTGSGKTyTM~G~~~~~GIipRal~~LF~ 360 (860)
|+-.|+.||||++--.=-....|+..-...+||+
T Consensus 3 Iil~GpPGsGKgTqa~~La~~~g~~~istGdllR 36 (206)
T 3sr0_A 3 LVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILR 36 (206)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHCCEEEEHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCeEEcHHHHHH
Confidence 6788999999975321001234555555666665
No 434
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=21.52 E-value=3.1e+02 Score=30.53 Aligned_cols=17 Identities=6% Similarity=0.311 Sum_probs=12.9
Q ss_pred ccccCCCchHHHHHhhh
Q 037169 788 SDLLKGTNSLRELRRKR 804 (860)
Q Consensus 788 ~~~~~~~~~~~~~~~~~ 804 (860)
..+.=|.+.++.++..+
T Consensus 224 gEfWLGle~IH~LT~~~ 240 (411)
T 3ghg_C 224 TEFWLGNEKIHLISTQS 240 (411)
T ss_dssp CCEECCHHHHHHHHTSS
T ss_pred CceEeccHHHhHhhccC
Confidence 35667888999998754
No 435
>3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A*
Probab=21.48 E-value=28 Score=34.56 Aligned_cols=16 Identities=31% Similarity=0.511 Sum_probs=13.2
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
..+-||++|||||..|
T Consensus 25 ~~~I~G~NgsGKStil 40 (203)
T 3qks_A 25 INLIIGQNGSGKSSLL 40 (203)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred eEEEEcCCCCCHHHHH
Confidence 4457899999999876
No 436
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=21.29 E-value=25 Score=35.17 Aligned_cols=16 Identities=19% Similarity=0.495 Sum_probs=12.8
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|.-.|++|+|||..+
T Consensus 21 ~ivl~GPSGaGKsTL~ 36 (197)
T 3ney_A 21 TLVLIGASGVGRSHIK 36 (197)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECcCCCCHHHHH
Confidence 4556899999999865
No 437
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=21.07 E-value=3.8e+02 Score=26.20 Aligned_cols=19 Identities=0% Similarity=0.055 Sum_probs=9.2
Q ss_pred ChHHHHHHHHHHHHHHHHh
Q 037169 580 DISKLQKVKMMLEKTKQEV 598 (860)
Q Consensus 580 ~~~~~~~lk~~l~~~k~e~ 598 (860)
+....++++.+.++.+.+.
T Consensus 69 T~EQq~ql~~I~~e~r~~~ 87 (175)
T 3lay_A 69 TTEQQATAQKIYDDYYTQT 87 (175)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 3344455555555544443
No 438
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=21.03 E-value=26 Score=42.79 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=25.0
Q ss_pred EeccchhhHHHhh-CCccEEEEeeccCCCCccccc
Q 037169 308 VFADASPLVTSVL-DGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 308 Vf~~v~plV~~~l-~G~N~~IfaYGqTGSGKTyTM 341 (860)
||.-+.....+++ ++.|-||+.-|.+|||||.+.
T Consensus 152 ifaiA~~Ay~~m~~~~~nQsIiiSGESGAGKTe~t 186 (837)
T 1kk8_A 152 LFSVADNAYQNMVTDRENQSCLITGESGAGKTENT 186 (837)
T ss_dssp HHHHHHHHHHHHHHHTSEEEEEEECSTTSSHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEeCCCCCCchhhH
Confidence 5544433333333 599999999999999999875
No 439
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=21.01 E-value=32 Score=35.78 Aligned_cols=28 Identities=18% Similarity=0.178 Sum_probs=20.3
Q ss_pred hhHHHhhCCcc--EEEEeeccCCCCccccc
Q 037169 314 PLVTSVLDGYN--VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 314 plV~~~l~G~N--~~IfaYGqTGSGKTyTM 341 (860)
+.++.+.-|.. .++.-.|++|+|||..+
T Consensus 23 ~~Ld~i~~~l~~G~~~~i~G~~G~GKTTl~ 52 (296)
T 1cr0_A 23 TGINDKTLGARGGEVIMVTSGSGMGKSTFV 52 (296)
T ss_dssp TTHHHHHCSBCTTCEEEEEESTTSSHHHHH
T ss_pred HHHHHHhcCCCCCeEEEEEeCCCCCHHHHH
Confidence 44666665443 36778999999999876
No 440
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=20.98 E-value=26 Score=37.47 Aligned_cols=17 Identities=29% Similarity=0.274 Sum_probs=13.9
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
.+|.-.|++|||||+++
T Consensus 91 ~ivgI~G~sGsGKSTL~ 107 (312)
T 3aez_A 91 FIIGVAGSVAVGKSTTA 107 (312)
T ss_dssp EEEEEECCTTSCHHHHH
T ss_pred EEEEEECCCCchHHHHH
Confidence 45566799999999976
No 441
>2va8_A SSO2462, SKI2-type helicase; hydrolase, DNA repair, ATP-bindin nucleotide-binding; 2.30A {Sulfolobus solfataricus}
Probab=20.94 E-value=28 Score=41.13 Aligned_cols=25 Identities=32% Similarity=0.559 Sum_probs=17.6
Q ss_pred hHHH-hhCCccEEEEeeccCCCCccccc
Q 037169 315 LVTS-VLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 315 lV~~-~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
.+.. +.+|.| ++..|+||||||...
T Consensus 38 ~i~~~~~~~~~--~lv~apTGsGKT~~~ 63 (715)
T 2va8_A 38 AVKKGLLEGNR--LLLTSPTGSGKTLIA 63 (715)
T ss_dssp HHHTTTTTTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHhcCCCc--EEEEcCCCCcHHHHH
Confidence 3344 345554 577899999999875
No 442
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=20.91 E-value=26 Score=43.66 Aligned_cols=20 Identities=35% Similarity=0.541 Sum_probs=0.0
Q ss_pred CCccEEEEeeccCCCCcccc
Q 037169 321 DGYNVCIFAYGQTGTGKTFT 340 (860)
Q Consensus 321 ~G~N~~IfaYGqTGSGKTyT 340 (860)
++.|-||+..|.+|||||.+
T Consensus 169 ~~~~QsIiisGESGAGKTe~ 188 (1010)
T 1g8x_A 169 DRQNQSLLITGESGAGKTEN 188 (1010)
T ss_dssp HTCCEEEEEEESTTSSHHHH
T ss_pred cCCCeEEEEeCCCCCCcchH
No 443
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=20.83 E-value=37 Score=36.88 Aligned_cols=31 Identities=29% Similarity=0.353 Sum_probs=23.0
Q ss_pred cchhhHHHhhC--Cc--cEEEEeeccCCCCccccc
Q 037169 311 DASPLVTSVLD--GY--NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 311 ~v~plV~~~l~--G~--N~~IfaYGqTGSGKTyTM 341 (860)
...+-++.++. |. ...+.-||+.|||||+.+
T Consensus 44 TG~~~LD~~Lg~GGl~~G~iv~I~G~pGsGKTtLa 78 (349)
T 2zr9_A 44 TGSISLDVALGIGGLPRGRVIEIYGPESSGKTTVA 78 (349)
T ss_dssp CSCHHHHHHTSSSSEETTSEEEEEESTTSSHHHHH
T ss_pred cCCHHHHHHhccCCccCCeEEEEECCCCCCHHHHH
Confidence 34566788887 33 456788999999999864
No 444
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=20.77 E-value=28 Score=42.29 Aligned_cols=34 Identities=32% Similarity=0.472 Sum_probs=24.9
Q ss_pred EeccchhhHHHhh-CCccEEEEeeccCCCCccccc
Q 037169 308 VFADASPLVTSVL-DGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 308 Vf~~v~plV~~~l-~G~N~~IfaYGqTGSGKTyTM 341 (860)
||.-+.....+++ ++.|-||+.-|.+|||||.+.
T Consensus 139 ifaiA~~Ay~~m~~~~~nQsIiisGESGAGKTe~t 173 (795)
T 1w7j_A 139 IFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSA 173 (795)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHH
T ss_pred HhHHHHHHHHHhHhcCCCeEEEEeCCCCCCcchHH
Confidence 5544433333433 599999999999999999875
No 445
>2whx_A Serine protease/ntpase/helicase NS3; transcription, hydrolase, ATP-binding, reticulum, nucleotidyltransferase, multifunctional enzyme; HET: ADP; 2.20A {Dengue virus 4} PDB: 2vbc_A 2wzq_A
Probab=20.75 E-value=31 Score=40.48 Aligned_cols=24 Identities=17% Similarity=0.026 Sum_probs=18.9
Q ss_pred HHHhhCCccEEEEeeccCCCCccccc
Q 037169 316 VTSVLDGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 316 V~~~l~G~N~~IfaYGqTGSGKTyTM 341 (860)
+..++.|.++ +..++||||||...
T Consensus 180 i~~l~~g~dv--lv~a~TGSGKT~~~ 203 (618)
T 2whx_A 180 EDIFRKKRLT--IMDLHPGAGKTKRI 203 (618)
T ss_dssp GGGGSTTCEE--EECCCTTSSTTTTH
T ss_pred HHHHhcCCeE--EEEcCCCCCHHHHH
Confidence 5566778765 67899999999984
No 446
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding; 3.20A {Archaeoglobus fulgidus}
Probab=20.71 E-value=1.4e+02 Score=28.53 Aligned_cols=45 Identities=18% Similarity=0.243 Sum_probs=25.4
Q ss_pred chhhHHHhhCCccEEEEeeccCCCCccccccCCCCCCCchhhHHHHHHHHHH
Q 037169 312 ASPLVTSVLDGYNVCIFAYGQTGTGKTFTMEGTQQNRGVNYRTLELLFKIAE 363 (860)
Q Consensus 312 v~plV~~~l~G~N~~IfaYGqTGSGKTyTM~G~~~~~GIipRal~~LF~~~~ 363 (860)
+..+|..+.. .+|--|-||-..-.|...++.=++.++..+...+.
T Consensus 123 a~~lvk~~~~-------~~gGkGGGkp~~AQggg~~~~~l~~al~~~~~~~~ 167 (171)
T 2zvf_A 123 ARELLREIGR-------VAKGSGGGRKDVAQGAVQQLLDREEMLDVIFRFLS 167 (171)
T ss_dssp HHHHHHHHHH-------HHTEECCBCSSEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-------HcCCCCCCcHHHcccCCCChhHHHHHHHHHHHHHH
Confidence 4455555532 23445667766555544455556777777766654
No 447
>2xau_A PRE-mRNA-splicing factor ATP-dependent RNA helica; hydrolase, ribosome biogenesis, ATPase, ATP-binding, OB-fold; HET: ADP; 1.90A {Saccharomyces cerevisiae} PDB: 3kx2_B*
Probab=20.71 E-value=24 Score=42.57 Aligned_cols=25 Identities=24% Similarity=0.343 Sum_probs=16.4
Q ss_pred hHHHhhCCccEEEEeeccCCCCcccc
Q 037169 315 LVTSVLDGYNVCIFAYGQTGTGKTFT 340 (860)
Q Consensus 315 lV~~~l~G~N~~IfaYGqTGSGKTyT 340 (860)
.+..++.|.. .++..|+||||||..
T Consensus 101 ~i~~~l~~~~-~vii~gpTGSGKTtl 125 (773)
T 2xau_A 101 EFLKLYQNNQ-IMVFVGETGSGKTTQ 125 (773)
T ss_dssp HHHHHHHHCS-EEEEECCTTSSHHHH
T ss_pred HHHHHHhCCC-eEEEECCCCCCHHHH
Confidence 3344444432 456789999999994
No 448
>3l4q_C Phosphatidylinositol 3-kinase regulatory subunit beta; PI3K, phosphoinositide-3-kinase, influenza virus, NS1; 2.30A {Bos taurus} PDB: 2v1y_B
Probab=20.63 E-value=6e+02 Score=24.80 Aligned_cols=110 Identities=17% Similarity=0.217 Sum_probs=59.5
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhhhh-----------hhhh------------
Q 037169 136 DKLMRMKSMAKCEKRIKELKIQCQLKTDECYEAWMSLTAANDQLEKVRMGLDN-----------KCFQ------------ 192 (860)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~-----------~~~~------------ 192 (860)
.-++...+++.+..++.++-.++..+..+...+.........++...+.-+.. ...+
T Consensus 4 ~~~~~~~~ve~v~~~L~e~h~qy~~ks~~yd~l~e~y~r~sqEiq~Kr~AieAF~E~ik~FeeQ~~~qer~~~~~~~~f~ 83 (170)
T 3l4q_C 4 DQIVKEDSVEAVGAQLKVYHQQYQDKSREYDQLYEEYTRTSQELQMKRTAIEAFNETIKIFEEQGQTQEKSSKEYLERFR 83 (170)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTGGGSSSS
T ss_pred hhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 34556678888999999999888888887766666555444444333222211 1000
Q ss_pred -------hhhHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037169 193 -------NLCLD---QALEKQAAKLKDVASLYERDKRLWIIAMNELERKILIWKEEHSQLARE 245 (860)
Q Consensus 193 -------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~e 245 (860)
...+. .-+..-+.+|++....++..-+........++.++..++-+..+|...
T Consensus 84 ~e~~~~E~~~l~~N~e~LksRL~~l~~sk~~L~e~L~~q~~~~relERemnsLKPeL~qL~K~ 146 (170)
T 3l4q_C 84 REGNEKEMQRILLNSERLKSRIAEIHESRTKLEQELRAQASDNREIDKRMNSLKPDLMQLRKI 146 (170)
T ss_dssp SCCCSSSTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 00111 123344445555555555555555555556666666666666555543
No 449
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=20.62 E-value=4.8e+02 Score=23.68 Aligned_cols=10 Identities=30% Similarity=0.571 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 037169 671 VQRKVKELEN 680 (860)
Q Consensus 671 lq~~~~ele~ 680 (860)
+..+++.++.
T Consensus 93 l~~r~~~l~~ 102 (133)
T 1fxk_C 93 IKSQKNELES 102 (133)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 450
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=20.62 E-value=28 Score=43.37 Aligned_cols=34 Identities=32% Similarity=0.434 Sum_probs=24.7
Q ss_pred EeccchhhHHHhh-CCccEEEEeeccCCCCccccc
Q 037169 308 VFADASPLVTSVL-DGYNVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 308 Vf~~v~plV~~~l-~G~N~~IfaYGqTGSGKTyTM 341 (860)
||.-+.....+++ ++.|-||+.-|.+|||||.+.
T Consensus 129 ifaiA~~Ay~~m~~~~~~QsIiisGESGAGKTe~~ 163 (995)
T 2ycu_A 129 VYAVTEGAYRSMLQDREDQSILCTGESGAGKTENT 163 (995)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECBTTSSHHHHH
T ss_pred HHHHhHHHHHHHHhcCCCcEEEecCCCCCCchhhH
Confidence 5544433333333 699999999999999999774
No 451
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=20.54 E-value=27 Score=35.03 Aligned_cols=18 Identities=28% Similarity=0.357 Sum_probs=14.5
Q ss_pred cEEEEeeccCCCCccccc
Q 037169 324 NVCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 324 N~~IfaYGqTGSGKTyTM 341 (860)
...|+-.|..|||||+..
T Consensus 16 ~~~I~l~G~~GsGKsT~a 33 (233)
T 1ak2_A 16 GVRAVLLGPPGAGKGTQA 33 (233)
T ss_dssp CCEEEEECCTTSSHHHHH
T ss_pred CeEEEEECCCCCCHHHHH
Confidence 345788999999999854
No 452
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=20.51 E-value=39 Score=35.84 Aligned_cols=16 Identities=50% Similarity=0.613 Sum_probs=12.8
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|...|.+|+|||+++
T Consensus 100 vi~i~G~~G~GKTT~~ 115 (297)
T 1j8m_F 100 VIMLVGVQGTGKTTTA 115 (297)
T ss_dssp EEEEECSSCSSTTHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3444699999999987
No 453
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=20.48 E-value=27 Score=34.26 Aligned_cols=15 Identities=27% Similarity=0.375 Sum_probs=12.4
Q ss_pred EEeeccCCCCccccc
Q 037169 327 IFAYGQTGTGKTFTM 341 (860)
Q Consensus 327 IfaYGqTGSGKTyTM 341 (860)
|+-.|+.|||||+..
T Consensus 3 I~l~G~~GsGKsT~a 17 (216)
T 3dl0_A 3 LVLMGLPGAGKGTQG 17 (216)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 566899999999854
No 454
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E*
Probab=20.33 E-value=27 Score=39.48 Aligned_cols=16 Identities=44% Similarity=0.530 Sum_probs=13.8
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|+-||++|+|||+..
T Consensus 52 ~iLl~GppGtGKT~la 67 (444)
T 1g41_A 52 NILMIGPTGVGKTEIA 67 (444)
T ss_dssp CEEEECCTTSSHHHHH
T ss_pred eEEEEcCCCCCHHHHH
Confidence 4788999999999865
No 455
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=20.32 E-value=28 Score=33.39 Aligned_cols=16 Identities=31% Similarity=0.503 Sum_probs=13.0
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|.-.|..|||||+..
T Consensus 2 ~I~i~G~~GsGKsT~~ 17 (205)
T 2jaq_A 2 KIAIFGTVGAGKSTIS 17 (205)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEECCCccCHHHHH
Confidence 3677899999999854
No 456
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=20.29 E-value=32 Score=38.65 Aligned_cols=16 Identities=44% Similarity=0.592 Sum_probs=13.7
Q ss_pred EEEeeccCCCCccccc
Q 037169 326 CIFAYGQTGTGKTFTM 341 (860)
Q Consensus 326 ~IfaYGqTGSGKTyTM 341 (860)
.|...|++|+|||+|.
T Consensus 101 vI~ivG~~GvGKTTla 116 (432)
T 2v3c_C 101 VILLVGIQGSGKTTTA 116 (432)
T ss_dssp CEEEECCSSSSTTHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4666899999999987
No 457
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=20.09 E-value=3.6e+02 Score=23.44 Aligned_cols=18 Identities=17% Similarity=0.230 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 037169 223 IAMNELERKILIWKEEHS 240 (860)
Q Consensus 223 ~~~~~~~~~~~~~~~e~~ 240 (860)
..|..+++.+...+..+.
T Consensus 58 ~ei~~le~~i~rhk~~i~ 75 (84)
T 1gmj_A 58 KEIERLQKEIERHKQSIK 75 (84)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344455555544444433
No 458
>2ius_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- binding, cell division, transmembrane, inner membrane; HET: DNA; 2.7A {Escherichia coli} PDB: 2j5p_A*
Probab=20.05 E-value=26 Score=40.42 Aligned_cols=17 Identities=24% Similarity=0.493 Sum_probs=13.9
Q ss_pred EEEEeeccCCCCccccc
Q 037169 325 VCIFAYGQTGTGKTFTM 341 (860)
Q Consensus 325 ~~IfaYGqTGSGKTyTM 341 (860)
..++..|.||||||+.+
T Consensus 168 pHlLIaG~TGSGKSt~L 184 (512)
T 2ius_A 168 PHLLVAGTTGSGASVGV 184 (512)
T ss_dssp CSEEEECCTTSSHHHHH
T ss_pred ceEEEECCCCCCHHHHH
Confidence 34577899999999976
Done!