Query 037174
Match_columns 301
No_of_seqs 225 out of 807
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 15:57:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037174.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037174hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b8c_A ATPase 2, plasma membra 100.0 6.5E-33 2.2E-37 293.0 -9.4 237 1-237 645-881 (885)
2 1mhs_A Proton pump, plasma mem 99.8 1.7E-20 5.7E-25 199.1 13.5 207 1-219 691-897 (920)
3 2o98_P H-ATPase PMA2, plasma m 99.6 1.9E-16 6.6E-21 112.8 1.1 48 254-301 5-52 (52)
4 3m50_P N.plumbaginifolia H+-tr 99.6 4.3E-16 1.5E-20 98.4 0.6 30 272-301 2-31 (31)
5 2zxe_A Na, K-ATPase alpha subu 99.3 2.4E-12 8.2E-17 138.0 11.6 198 2-199 781-1016(1028)
6 3ixz_A Potassium-transporting 99.1 9.1E-10 3.1E-14 118.1 17.9 200 1-200 785-1023(1034)
7 3ar4_A Sarcoplasmic/endoplasmi 99.1 1.5E-09 5.1E-14 115.9 17.2 198 2-199 762-991 (995)
8 4dve_A Biotin transporter BIOY 26.0 3.1E+02 0.011 23.5 10.7 35 53-87 43-77 (198)
9 4ev6_A Magnesium transport pro 24.6 94 0.0032 28.4 5.4 12 164-175 302-313 (339)
10 1yew_C Particulate methane mon 18.8 53 0.0018 30.1 2.2 133 46-190 113-263 (289)
No 1
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=99.96 E-value=6.5e-33 Score=293.00 Aligned_cols=237 Identities=70% Similarity=1.200 Sum_probs=172.6
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhhcceeeecccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHH
Q 037174 1 MQIYAVSITIRIVLGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFATGIVIGTYLALVT 80 (301)
Q Consensus 1 Yiiy~is~T~~ivl~f~l~ali~~f~~~p~~ILlialLnD~~~mtIa~DrV~pS~~P~~W~l~~I~~~~~vlG~~~av~t 80 (301)
|+.|.++.|+.++++++..++.|++|++|+|+++++++||+..|++++|+++|+++|++|++++++..++++|++.++.+
T Consensus 645 ~i~~~l~~n~~~~~~~~~~~~~~~~~l~p~~il~i~l~~d~~~l~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~ 724 (885)
T 3b8c_A 645 YTIYAVSITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVLGGYQAIMT 724 (885)
T ss_dssp HHHHHHHHTTTTTSTTHHHHSSCSSCSCHHHHHHHHHHHHTTTCCCCCCCCCCSSCCCSTTTTTTTTTHHHHHSSTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCcCcCHHHHHHHHHHHHHHHHhhcccccCcccCCcchhHHHHHHHHHHHHHHHHHHH
Confidence 45678888887776555555556789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccccccccccCCccchhhHHHHHHHHhhhhheeeeeeeCCCCcccCCcHHHHHHHHHHHHHHHHHhhh
Q 037174 81 VLFFWVVVDTDFFETHFHVKSLSSKTEEVSSAVYLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVY 160 (301)
Q Consensus 81 v~~f~i~~~t~ff~~~~~~~~~~~~~~~lqt~~FL~v~it~q~lIfvtRtr~~f~~srPS~~Ll~A~~~a~liatlia~~ 160 (301)
+++|+++..+.|+++.+|+++...+..+.||.+|+..++.+|+.+|++|+++++|.++|+.++++++++.+++++++++|
T Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~Rs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (885)
T 3b8c_A 725 VIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVERPGALLMIAFLIAQLIATLIAVY 804 (885)
T ss_dssp TTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGGGTTCSSSCTTTSTTSTTTTTSGGGSSTTTTTTSSSSS
T ss_pred HHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccCccHHHHHHHHHHHHHHHHHHHh
Confidence 98888776555665545543222224568899999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccccccccccCchhhHHhHHHhhhh
Q 037174 161 AHISFAYISGVGWGWAGVIWLYSFIFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRS 237 (301)
Q Consensus 161 g~~~~~~~~~i~w~~~~~iwl~~iv~~l~lD~vK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
+.+.+.++.+++|.+++++|+++++++++.|+.|...|+.+++++|++.+++|++|++|||||+++||++|+.+...
T Consensus 805 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (885)
T 3b8c_A 805 ANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYILSGKAWLNLFENKTAFTMKKDYGKEEREAQWMRGSHH 881 (885)
T ss_dssp CCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC-------------------------------------
T ss_pred ccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccHhhhhccccccccchhcccccccccccccccc
Confidence 76666568999999999999999999999999999999999999999999999999999999999999999987543
No 2
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=99.83 E-value=1.7e-20 Score=199.08 Aligned_cols=207 Identities=19% Similarity=0.309 Sum_probs=166.7
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhhcceeeecccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHH
Q 037174 1 MQIYAVSITIRIVLGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFATGIVIGTYLALVT 80 (301)
Q Consensus 1 Yiiy~is~T~~ivl~f~l~ali~~f~~~p~~ILlialLnD~~~mtIa~DrV~pS~~P~~W~l~~I~~~~~vlG~~~av~t 80 (301)
|+.|.++.|+...+.+.+.+.++.++++|.|++++++++|++.+++++|+.+++++|++|+.++++..+++.|++.++.+
T Consensus 691 ~i~~~l~~n~~~~~~~~~~~~~~~~~l~~~~il~~~l~~d~~~lal~~e~~~~~~~P~~~~~~~~~~~~~~~g~~~~~~~ 770 (920)
T 1mhs_A 691 YVVYRIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTPVKWNLPKLWGMSVLLGVVLAVGT 770 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCSCCCCHHHHHHHHHHHTTHHHHCCCCCSGGGGSCCCCCSSSCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhhhhcccCcccccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 35677888887654233334444678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccccccccccCCccchhhHHHHHHHHhhhhheeeeeeeCCCCcccCCcHHHHHHHHHHHHHHHHHhhh
Q 037174 81 VLFFWVVVDTDFFETHFHVKSLSSKTEEVSSAVYLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVY 160 (301)
Q Consensus 81 v~~f~i~~~t~ff~~~~~~~~~~~~~~~lqt~~FL~v~it~q~lIfvtRtr~~f~~srPS~~Ll~A~~~a~liatlia~~ 160 (301)
+..|+.... +....+ +..+.++.||++|+.+++++.+.+|.+|++++||+++|++++++++++.+++++.++++
T Consensus 771 ~~~~~~~~~---~~~~~~---~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (920)
T 1mhs_A 771 WITVTTMYA---QGENGG---IVQNFGNMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIW 844 (920)
T ss_dssp HHHHHHHTT---TTTTCC---SSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHH---hccccc---ccchhhHHHHHHHHHHHHHHHHHHHHhccchhhhcCchHHHHHHHHHHHHHHHHHHHHh
Confidence 877765431 000011 11234578999999999999999999999999999999999999999999999999988
Q ss_pred hhcccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccccccc
Q 037174 161 AHISFAYISGVGWGWAGVIWLYSFIFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSK 219 (301)
Q Consensus 161 g~~~~~~~~~i~w~~~~~iwl~~iv~~l~lD~vK~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (301)
+ ++...+++|.+++.+|+++++++++.|+.|..++. .+.|++..++|.+..++
T Consensus 845 ~---~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~---~~~fd~~~~~~~~~~~~ 897 (920)
T 1mhs_A 845 G---WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQD---SVGFDNLMHGKSPKGNQ 897 (920)
T ss_dssp S---STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCC---CCTTHHHHHHHSTTTHH
T ss_pred h---hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hHHHHHHhccCcccccc
Confidence 6 44678999999999999999999999999964333 35777766655543333
No 3
>2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia}
Probab=99.58 E-value=1.9e-16 Score=112.77 Aligned_cols=48 Identities=56% Similarity=0.823 Sum_probs=46.7
Q ss_pred ccchHHHHHhcchhhhhhhhcccccchhhhhhhhcCCChhhhhccccC
Q 037174 254 RSSLIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 301 (301)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (301)
++++++|+++||||++||||+||+|||+||++|+||+|++.+++||||
T Consensus 5 ~~s~~ae~a~~raeiarL~~~~sl~~~~es~~kl~g~dl~~~~~~~tv 52 (52)
T 2o98_P 5 ELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHTCCCCCCCCCCCC
T ss_pred HHHHHHHHhcCcceeeccccchhHHHHHHhhHhhhhhhHhhcccccCC
Confidence 678899999999999999999999999999999999999999999997
No 4
>3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* 4dx0_P*
Probab=99.55 E-value=4.3e-16 Score=98.36 Aligned_cols=30 Identities=53% Similarity=0.881 Sum_probs=29.5
Q ss_pred hhcccccchhhhhhhhcCCChhhhhccccC
Q 037174 272 GEIHTLRGHVESVVRLKNLDLNVIQAAHTV 301 (301)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (301)
||+||||||+||++||||+|+|+|||||||
T Consensus 2 rElhTLkghvESv~KLKglDi~~i~~~yTV 31 (31)
T 3m50_P 2 RELHTLKGHVEAVVKLKGLDIETIQQSYDI 31 (31)
T ss_dssp HHHHCHHHHHHHHHHHTTCCSCCCCCCCCC
T ss_pred chhhHHHHHHHHHHHHhcCChhhhhhcccC
Confidence 899999999999999999999999999998
No 5
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=99.35 E-value=2.4e-12 Score=138.02 Aligned_cols=198 Identities=13% Similarity=0.231 Sum_probs=140.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHhhc-ceeeecccCCCCC---CCCCCCCcchh------hHHHH
Q 037174 2 QIYAVSITIRIVLGFVLLALIW-EYDFPPFMVLIIAILNDG-TIMTISKDRVKPS---PRPDSWKLNEI------FATGI 70 (301)
Q Consensus 2 iiy~is~T~~ivl~f~l~ali~-~f~~~p~~ILlialLnD~-~~mtIa~DrV~pS---~~P~~W~l~~I------~~~~~ 70 (301)
+.|.++.|+..++.+++..++. +.|++|+|++.++++.|+ +.+++++|+.+++ ++|++|+-..+ +...+
T Consensus 781 i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~ 860 (1028)
T 2zxe_A 781 IAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYG 860 (1028)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchhhhccCCCCcccccccCHHHHHHHHH
Confidence 4577778887777444444432 578999999999999995 7899999999875 66888876333 22234
Q ss_pred HHHHHHHHHHHHHHHHHHh-cccccc-ccc---------cccc----CC---------ccchhhHHHHHHHHhhhhheee
Q 037174 71 VIGTYLALVTVLFFWVVVD-TDFFET-HFH---------VKSL----SS---------KTEEVSSAVYLQVSIISQALIF 126 (301)
Q Consensus 71 vlG~~~av~tv~~f~i~~~-t~ff~~-~~~---------~~~~----~~---------~~~~lqt~~FL~v~it~q~lIf 126 (301)
..|++.++.++..|++... ..+.+. .++ .+.+ .. ...+.||++|+.++++|.+.+|
T Consensus 861 ~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~ 940 (1028)
T 2zxe_A 861 QIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLI 940 (1028)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 6688888888877655431 111000 000 0000 00 0126799999999999999999
Q ss_pred eeeeCC-CCcc-cCCcHHHHHHHHHHHHHHHHHhhhhh-cccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037174 127 VTRSQS-WSFL-ERPGALLMCAFVVAQLVATLIAVYAH-ISFAYISGVGWGWAGVIWLYSFIFYIPLDVIKFIVRY 199 (301)
Q Consensus 127 vtRtr~-~f~~-srPS~~Ll~A~~~a~liatlia~~g~-~~~~~~~~i~w~~~~~iwl~~iv~~l~lD~vK~~~~~ 199 (301)
..|+++ ++|+ ..+++++++++++..++..++.+.|. ...+++.+++|.+++++++++++.++..++.|...|.
T Consensus 941 ~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~ 1016 (1028)
T 2zxe_A 941 ICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRR 1016 (1028)
T ss_dssp HTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHHHTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999976 4344 47899999999999988888888763 3456889999998888888888777677777766553
No 6
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=99.14 E-value=9.1e-10 Score=118.14 Aligned_cols=200 Identities=12% Similarity=0.243 Sum_probs=140.4
Q ss_pred CchhhHHHHHHHHHHHHHHHHH-HhcCCCHHHHHHHHHHhhc-ceeeecccCCCCC---CCCCCCCcc-----hhhH-HH
Q 037174 1 MQIYAVSITIRIVLGFVLLALI-WEYDFPPFMVLIIAILNDG-TIMTISKDRVKPS---PRPDSWKLN-----EIFA-TG 69 (301)
Q Consensus 1 Yiiy~is~T~~ivl~f~l~ali-~~f~~~p~~ILlialLnD~-~~mtIa~DrV~pS---~~P~~W~l~-----~I~~-~~ 69 (301)
++.|.+++|+..++.+++..++ +++|++|+|+|++|++.|+ +.+++++|+.++. ++|.+++-. .++. ..
T Consensus 785 ~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~ 864 (1034)
T 3ixz_A 785 SIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSY 864 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCChhhhhCCCCCCccccccCHHHHHHHH
Confidence 3578899999988755444444 3689999999999999995 7999999999986 678777422 2333 33
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-ccccc-cccccc---------cCC-------------ccchhhHHHHHHHHhhhhhee
Q 037174 70 IVIGTYLALVTVLFFWVVVDT-DFFET-HFHVKS---------LSS-------------KTEEVSSAVYLQVSIISQALI 125 (301)
Q Consensus 70 ~vlG~~~av~tv~~f~i~~~t-~ff~~-~~~~~~---------~~~-------------~~~~lqt~~FL~v~it~q~lI 125 (301)
...|++.++.+++.|+..... .|.+. .++... +.. ...+-+|+.|..+++.+.+..
T Consensus 865 ~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~ 944 (1034)
T 3ixz_A 865 FQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADV 944 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 456888888888776654421 11111 011100 000 012368999999999999999
Q ss_pred eeeeeCC-CCccc--CCcHHHHHHHHHHHHHHHHHhhhhhc-ccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037174 126 FVTRSQS-WSFLE--RPGALLMCAFVVAQLVATLIAVYAHI-SFAYISGVGWGWAGVIWLYSFIFYIPLDVIKFIVRYA 200 (301)
Q Consensus 126 fvtRtr~-~f~~s--rPS~~Ll~A~~~a~liatlia~~g~~-~~~~~~~i~w~~~~~iwl~~iv~~l~lD~vK~~~~~~ 200 (301)
|..|+++ ..|+. ...++++.++++..++..++.+.+.. ..++..+++|.+++++.+++++.+++..+.|...|..
T Consensus 945 ~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~ 1023 (1034)
T 3ixz_A 945 LIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCC 1023 (1034)
T ss_pred HhhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999975 55654 35677888888777777666665532 4568899999998888888888887878888876643
No 7
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=99.10 E-value=1.5e-09 Score=115.92 Aligned_cols=198 Identities=15% Similarity=0.115 Sum_probs=131.1
Q ss_pred chhhHHHHHHHHHHHHHHHHH-HhcCCCHHHHHHHHHHhh-cceeeecccCCCCC--CCCCCCCcch-----hhHHHHHH
Q 037174 2 QIYAVSITIRIVLGFVLLALI-WEYDFPPFMVLIIAILND-GTIMTISKDRVKPS--PRPDSWKLNE-----IFATGIVI 72 (301)
Q Consensus 2 iiy~is~T~~ivl~f~l~ali-~~f~~~p~~ILlialLnD-~~~mtIa~DrV~pS--~~P~~W~l~~-----I~~~~~vl 72 (301)
+.|.+++|+..++.+++.+++ ++.|++|.|++++|+++| ++.+++++|+.++. .+|-++.-.. .+.-.++.
T Consensus 762 i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~ 841 (995)
T 3ar4_A 762 IRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAI 841 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHH
Confidence 567888899887744444433 246899999999999999 58999999998875 3333343221 23333445
Q ss_pred HHHHHHHHHHHHHHHHh--cc-----cccc-cccc-----cccC----C--ccchhhHHHHHHHHhhhhheeeeeeeCC-
Q 037174 73 GTYLALVTVLFFWVVVD--TD-----FFET-HFHV-----KSLS----S--KTEEVSSAVYLQVSIISQALIFVTRSQS- 132 (301)
Q Consensus 73 G~~~av~tv~~f~i~~~--t~-----ff~~-~~~~-----~~~~----~--~~~~lqt~~FL~v~it~q~lIfvtRtr~- 132 (301)
|++.++.++..|..... .. +... .++- ..+. . ...+-||+.|.-+++.+.+..|..|+++
T Consensus 842 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~ 921 (995)
T 3ar4_A 842 GGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQ 921 (995)
T ss_dssp HHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSC
T ss_pred HHHHHHHHHHHHHHHHHhcccccccccchhccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhcccc
Confidence 77777776554332210 00 0000 0000 0000 0 0124689999999999999999999864
Q ss_pred CCccc--CCcHHHHHHHHHHHHHHHHHhhhhh-cccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 037174 133 WSFLE--RPGALLMCAFVVAQLVATLIAVYAH-ISFAYISGVGWGWAGVIWLYSFIFYIPLDVIKFIVRY 199 (301)
Q Consensus 133 ~f~~s--rPS~~Ll~A~~~a~liatlia~~g~-~~~~~~~~i~w~~~~~iwl~~iv~~l~lD~vK~~~~~ 199 (301)
..|.. .+++++++++++..++..++.+.+. ...+++.++++..++++++++++++++.++.|...|.
T Consensus 922 ~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~ 991 (995)
T 3ar4_A 922 SLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARN 991 (995)
T ss_dssp CTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHHHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred chhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 33332 3578888888888777777776653 2456789999988888889998888888888877654
No 8
>4dve_A Biotin transporter BIOY; ECF-transport, ligand-binding domain, biotin binding, membra transport protein; HET: BTN BNG; 2.09A {Lactococcus lactis subsp}
Probab=26.01 E-value=3.1e+02 Score=23.51 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=29.6
Q ss_pred CCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 037174 53 PSPRPDSWKLNEIFATGIVIGTYLALVTVLFFWVV 87 (301)
Q Consensus 53 pS~~P~~W~l~~I~~~~~vlG~~~av~tv~~f~i~ 87 (301)
.+|-|-..+.--+.-.+.++|.-....+++.|.+.
T Consensus 43 ~~pVPiTlQtl~V~LaG~~LG~r~G~lsv~lYlll 77 (198)
T 4dve_A 43 FIPVPIILQNMGIMMAGGLLGPKYGTISVGAFLAL 77 (198)
T ss_dssp SSSCCBCSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCccHHHHHHHHHHHHHChhHHHHHHHHHHHH
Confidence 45778888888999999999999999998877664
No 9
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=24.57 E-value=94 Score=28.38 Aligned_cols=12 Identities=17% Similarity=0.230 Sum_probs=6.9
Q ss_pred ccccccccChhH
Q 037174 164 SFAYISGVGWGW 175 (301)
Q Consensus 164 ~~~~~~~i~w~~ 175 (301)
++..|+.+.|.|
T Consensus 302 Nf~~mPel~~~~ 313 (339)
T 4ev6_A 302 NFSYLPLANNPQ 313 (339)
T ss_dssp CCSCCTTSSCTT
T ss_pred cCCCCCCccCch
Confidence 444567666654
No 10
>1yew_C Particulate methane monooxygenase subunit C2; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_C
Probab=18.78 E-value=53 Score=30.13 Aligned_cols=133 Identities=14% Similarity=0.212 Sum_probs=57.0
Q ss_pred ecccCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhccccccccc------ccc--cCCc-cchhhHHHHHH
Q 037174 46 ISKDRVKPSPRPDSWKLNEIFATGIVIGTYLALVTVLFFWVVVDTDFFETHFH------VKS--LSSK-TEEVSSAVYLQ 116 (301)
Q Consensus 46 Ia~DrV~pS~~P~~W~l~~I~~~~~vlG~~~av~tv~~f~i~~~t~ff~~~~~------~~~--~~~~-~~~lqt~~FL~ 116 (301)
.+-||--++-.|+. .+++++....+++.+. +.++|.+. ||.+.-| +++ +..+ .-++- ..|=-
T Consensus 113 kTRdr~l~~ltP~e-E~rR~~~l~~wl~vy~----~avYWgaS---fFtEQDgsWHQtviRDT~FTPSHIi~FY-~s~Pi 183 (289)
T 1yew_C 113 KTRDRNLAALTPRE-ELRRNFTHLVWLVAYA----WAIYWGAS---YFTEQDGTWHQTIVRDTDFTPSHIIEFY-LSYPI 183 (289)
T ss_dssp HTCCSCCSSCCTTH-HHHHHHHHHHHHHHHH----HHHHHHHT---HHHHHHHHHHHHSCCSSSCCHHHHHHTT-THHHH
T ss_pred eecccccccCCcHH-HHHHHHHHHHHHHHHH----HHHHhhhe---eeecccCceeeeeeecCCCChhHHHHHH-HhccH
Confidence 45677777778888 8888887777666654 44555432 2332111 111 1000 01111 11112
Q ss_pred HHhhhhheeeeeeeCCCCcccCCcHHHHHHHHHHHHHHHHHhhhhh--cc--c-----ccccccChhHHHHHHHHHHHHH
Q 037174 117 VSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAH--IS--F-----AYISGVGWGWAGVIWLYSFIFY 187 (301)
Q Consensus 117 v~it~q~lIfvtRtr~~f~~srPS~~Ll~A~~~a~liatlia~~g~--~~--~-----~~~~~i~w~~~~~iwl~~iv~~ 187 (301)
..+.+-...+-.|||=|.+..-=|.+++.++++-..+ ++--|. || + +-..|+.|+.+.+.|....+.-
T Consensus 184 yIi~Gv~~~lYArTRLP~~~kg~s~p~~~~v~GpfMi---lpnVglNEwGHtfWfmEELF~APLHWGFV~fGW~aL~v~G 260 (289)
T 1yew_C 184 YIITGFAAFIYAKTRLPFFAKGISLPYLVLVVGPFMI---LPNVGLNEWGHTFWFMEELFVAPLHYGFVIFGWLALAVMG 260 (289)
T ss_dssp HHHHHHHHHHHHHHHCTTCC------------------------------CCSHHHHTCCSSCCCTHHHHSTTTGGGCC-
T ss_pred HHHHHHHHHHHhhhcccccccCCchHHHHHHHhhHHh---hhhcchhhhHHHHHHHHHHccCCcccccHHHHHHHHHHHH
Confidence 2333444455589998988755555665544433222 222221 11 0 2346999999988887554444
Q ss_pred HHH
Q 037174 188 IPL 190 (301)
Q Consensus 188 l~l 190 (301)
+.+
T Consensus 261 v~~ 263 (289)
T 1yew_C 261 TLT 263 (289)
T ss_dssp ---
T ss_pred HHH
Confidence 433
Done!